Query 003199
Match_columns 840
No_of_seqs 728 out of 5843
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 16:53:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003199.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003199hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 9.1E-57 3.1E-61 539.1 32.8 437 1-444 207-745 (768)
2 3rgz_A Protein brassinosteroid 100.0 3.7E-52 1.2E-56 499.2 32.4 428 2-437 186-715 (768)
3 4asz_A BDNF/NT-3 growth factor 100.0 6.4E-53 2.2E-57 441.6 17.3 257 526-811 13-288 (299)
4 4gt4_A Tyrosine-protein kinase 100.0 1.2E-52 4.2E-57 441.4 18.4 257 527-811 27-305 (308)
5 3omv_A RAF proto-oncogene seri 100.0 2.4E-52 8.3E-57 436.7 19.6 262 526-812 36-300 (307)
6 4aoj_A High affinity nerve gro 100.0 2.9E-52 1E-56 442.8 19.9 257 526-811 41-318 (329)
7 4b9d_A Serine/threonine-protei 100.0 1.2E-51 4E-56 437.4 14.8 252 526-806 24-277 (350)
8 3t6q_A CD180 antigen; protein- 100.0 1.2E-49 4.2E-54 466.8 31.6 436 1-441 40-562 (606)
9 3j0a_A TOLL-like receptor 5; m 100.0 1.8E-49 6.3E-54 480.7 30.9 433 2-440 32-561 (844)
10 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.5E-51 1.9E-55 424.9 14.2 269 526-822 32-301 (311)
11 4fih_A Serine/threonine-protei 100.0 9.8E-51 3.3E-55 429.6 15.5 250 526-806 74-324 (346)
12 4g3f_A NF-kappa-beta-inducing 100.0 2.7E-50 9.2E-55 425.1 17.8 253 526-810 58-314 (336)
13 3hmm_A TGF-beta receptor type- 100.0 1.8E-50 6.3E-55 426.4 16.4 272 526-811 3-296 (303)
14 3fpq_A Serine/threonine-protei 100.0 4.9E-50 1.7E-54 416.2 19.3 247 529-806 29-283 (290)
15 3t6q_A CD180 antigen; protein- 100.0 4.2E-48 1.4E-52 453.7 35.6 416 1-422 64-565 (606)
16 3hyh_A Carbon catabolite-derep 100.0 7.6E-50 2.6E-54 410.9 16.5 250 525-806 12-263 (275)
17 4fie_A Serine/threonine-protei 100.0 1.8E-49 6.1E-54 430.4 16.5 250 526-806 151-401 (423)
18 4ase_A Vascular endothelial gr 100.0 1.8E-49 6.2E-54 424.6 16.0 258 526-810 64-345 (353)
19 1ziw_A TOLL-like receptor 3; i 100.0 1.7E-47 5.8E-52 454.8 34.7 437 2-441 33-624 (680)
20 3vq2_A TLR4, TOLL-like recepto 100.0 9.7E-48 3.3E-52 450.7 30.5 428 2-441 40-560 (606)
21 3ubd_A Ribosomal protein S6 ki 100.0 8.3E-50 2.8E-54 416.4 9.9 250 526-806 24-282 (304)
22 4g31_A Eukaryotic translation 100.0 3.6E-48 1.2E-52 406.4 18.2 253 525-806 4-280 (299)
23 3vq2_A TLR4, TOLL-like recepto 100.0 3.7E-46 1.3E-50 437.2 32.0 410 1-423 63-564 (606)
24 3j0a_A TOLL-like receptor 5; m 100.0 4.1E-46 1.4E-50 451.4 31.1 413 3-423 57-566 (844)
25 4eco_A Uncharacterized protein 100.0 9.3E-47 3.2E-51 441.8 22.3 416 17-442 81-603 (636)
26 2z63_A TOLL-like receptor 4, v 100.0 6.5E-46 2.2E-50 432.1 28.7 426 3-441 37-533 (570)
27 1ziw_A TOLL-like receptor 3; i 100.0 3.9E-45 1.3E-49 434.4 35.9 416 3-422 82-627 (680)
28 4eco_A Uncharacterized protein 100.0 1.1E-45 3.9E-50 432.6 24.9 407 1-420 88-603 (636)
29 4ecn_A Leucine-rich repeat pro 100.0 2.2E-45 7.4E-50 436.4 26.3 414 17-441 323-866 (876)
30 2z63_A TOLL-like receptor 4, v 100.0 2.9E-45 9.8E-50 426.7 26.2 409 17-437 28-505 (570)
31 4ecn_A Leucine-rich repeat pro 100.0 2.7E-45 9.3E-50 435.5 23.3 403 1-418 330-865 (876)
32 4b99_A Mitogen-activated prote 100.0 1.8E-45 6E-50 400.9 19.6 267 526-806 54-345 (398)
33 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-44 4.1E-49 419.2 24.8 412 17-441 26-512 (549)
34 4f9c_A Cell division cycle 7-r 100.0 1.2E-44 4.1E-49 390.4 15.5 200 524-742 19-250 (361)
35 3v5w_A G-protein coupled recep 100.0 1.2E-44 4E-49 409.6 15.7 255 526-806 189-450 (689)
36 2z81_A CD282 antigen, TOLL-lik 100.0 3.9E-44 1.3E-48 414.9 18.5 407 1-422 33-515 (549)
37 3uto_A Twitchin; kinase, muscl 100.0 5.7E-44 2E-48 408.8 18.3 254 524-806 155-411 (573)
38 3v47_A TOLL-like receptor 5B a 100.0 1E-42 3.6E-47 393.1 26.7 370 21-398 14-412 (455)
39 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-42 3.9E-47 399.6 25.5 419 1-441 7-483 (520)
40 4g8a_A TOLL-like receptor 4; l 100.0 1.2E-41 4.1E-46 401.7 28.7 402 17-422 52-585 (635)
41 2qkw_B Protein kinase; three-h 100.0 6.7E-42 2.3E-46 367.3 22.7 273 524-811 37-314 (321)
42 2z7x_B TOLL-like receptor 1, v 100.0 4.9E-42 1.7E-46 394.3 22.9 404 1-422 28-486 (520)
43 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.5E-41 8.5E-46 391.7 26.8 403 17-440 31-511 (562)
44 3v47_A TOLL-like receptor 5B a 100.0 2.8E-41 9.5E-46 381.4 25.7 371 44-422 13-413 (455)
45 3uim_A Brassinosteroid insensi 100.0 7.9E-42 2.7E-46 367.8 19.6 279 522-812 26-311 (326)
46 3kul_A Ephrin type-A receptor 100.0 5.6E-42 1.9E-46 367.9 17.3 261 526-813 49-314 (325)
47 3fe3_A MAP/microtubule affinit 100.0 1.2E-41 4.2E-46 364.7 18.5 250 526-807 15-266 (328)
48 4hcu_A Tyrosine-protein kinase 100.0 1.2E-41 4.2E-46 355.5 16.9 255 526-811 10-265 (269)
49 2qol_A Ephrin receptor; recept 100.0 8.9E-42 3E-46 373.0 16.5 260 526-812 45-309 (373)
50 2psq_A Fibroblast growth facto 100.0 2.2E-41 7.7E-46 369.6 19.6 257 526-810 81-362 (370)
51 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.8E-41 6E-46 354.2 17.8 257 526-813 8-265 (268)
52 3s95_A LIMK-1, LIM domain kina 100.0 4.8E-41 1.6E-45 358.8 21.3 261 526-812 10-282 (310)
53 3p86_A Serine/threonine-protei 100.0 2.2E-41 7.4E-46 360.4 18.5 259 526-813 37-299 (309)
54 3fxz_A Serine/threonine-protei 100.0 2E-41 6.7E-46 358.9 17.7 252 525-807 19-271 (297)
55 3zgw_A Maternal embryonic leuc 100.0 8.1E-42 2.8E-46 368.0 14.2 254 524-808 8-263 (347)
56 2nru_A Interleukin-1 receptor- 100.0 2.3E-40 7.8E-45 353.2 25.1 280 520-812 19-306 (307)
57 3soc_A Activin receptor type-2 100.0 2.3E-41 8E-46 362.9 17.5 268 526-811 24-317 (322)
58 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.6E-40 5.4E-45 385.0 24.2 400 2-423 39-516 (562)
59 4g8a_A TOLL-like receptor 4; l 100.0 1.4E-39 4.7E-44 384.0 32.6 415 19-441 33-582 (635)
60 4eqm_A Protein kinase; transfe 100.0 1.7E-40 5.9E-45 351.2 21.9 270 526-819 11-282 (294)
61 3gen_A Tyrosine-protein kinase 100.0 4.4E-41 1.5E-45 354.2 16.4 254 526-810 24-278 (283)
62 3cbl_A C-FES, proto-oncogene t 100.0 1.6E-41 5.4E-46 372.2 13.2 258 526-811 114-373 (377)
63 3niz_A Rhodanese family protei 100.0 8.7E-41 3E-45 356.4 18.3 271 525-811 20-308 (311)
64 3ugc_A Tyrosine-protein kinase 100.0 1.6E-41 5.6E-46 359.7 12.3 270 526-811 10-290 (295)
65 1tki_A Titin; serine kinase, m 100.0 5.3E-41 1.8E-45 359.3 16.1 251 525-808 4-260 (321)
66 1o6l_A RAC-beta serine/threoni 100.0 1.1E-40 3.9E-45 358.1 18.7 251 526-806 5-261 (337)
67 4euu_A Serine/threonine-protei 100.0 3.3E-40 1.1E-44 353.8 22.1 275 526-816 9-313 (319)
68 3lb7_A RAF proto-oncogene seri 100.0 2.1E-40 7.3E-45 352.6 20.2 262 526-812 36-300 (307)
69 3soa_A Calcium/calmodulin-depe 100.0 2.2E-40 7.6E-45 368.6 20.9 258 523-807 8-269 (444)
70 2yab_A Death-associated protei 100.0 1.2E-40 4.2E-45 361.1 18.4 260 524-807 10-274 (361)
71 3l9p_A Anaplastic lymphoma kin 100.0 8.4E-41 2.9E-45 364.8 16.8 261 526-814 71-347 (367)
72 3tki_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45 356.3 17.7 257 525-808 6-264 (323)
73 2bdw_A Hypothetical protein K1 100.0 2E-40 6.9E-45 360.7 18.9 256 523-806 26-285 (362)
74 1luf_A Muscle-specific tyrosin 100.0 2E-40 6.9E-45 359.6 18.8 263 525-815 46-338 (343)
75 2y0a_A Death-associated protei 100.0 2.6E-40 9E-45 355.1 18.5 260 523-807 8-273 (326)
76 1mp8_A Focal adhesion kinase 1 100.0 2.3E-40 7.8E-45 348.3 17.4 255 526-810 15-274 (281)
77 3h4j_B AMPK kdaid, SNF1-like p 100.0 1E-40 3.6E-45 357.9 15.1 251 526-808 9-261 (336)
78 1qcf_A Haematopoetic cell kina 100.0 1.3E-40 4.4E-45 374.0 16.5 256 526-813 188-445 (454)
79 3poz_A Epidermal growth factor 100.0 1.7E-40 5.8E-45 357.0 16.6 258 526-812 15-278 (327)
80 3t9t_A Tyrosine-protein kinase 100.0 2.2E-40 7.6E-45 345.7 16.3 256 526-812 8-264 (267)
81 1ob3_A PFPK5, cell division co 100.0 1.9E-40 6.5E-45 350.1 15.9 265 526-806 2-281 (288)
82 4fr4_A YANK1, serine/threonine 100.0 2.8E-40 9.6E-45 360.1 17.7 253 526-806 15-272 (384)
83 3vhe_A Vascular endothelial gr 100.0 1.2E-40 4.1E-45 363.8 14.7 259 525-810 21-353 (359)
84 3q4u_A Activin receptor type-1 100.0 4.3E-40 1.5E-44 350.0 18.5 262 525-811 7-301 (301)
85 1kob_A Twitchin; kinase, intra 100.0 4.3E-40 1.5E-44 360.1 18.9 255 524-807 49-306 (387)
86 4dc2_A Protein kinase C IOTA t 100.0 2.2E-40 7.4E-45 362.2 16.3 256 526-806 52-319 (396)
87 2c30_A Serine/threonine-protei 100.0 6.5E-40 2.2E-44 351.2 19.3 250 528-808 47-297 (321)
88 3tt0_A Basic fibroblast growth 100.0 3.8E-40 1.3E-44 362.1 18.0 258 526-811 69-351 (382)
89 3txo_A PKC-L, NPKC-ETA, protei 100.0 9.5E-41 3.2E-45 361.1 12.8 252 525-806 22-281 (353)
90 3lxl_A Tyrosine-protein kinase 100.0 6.1E-41 2.1E-45 360.9 11.2 278 526-817 23-308 (327)
91 2izr_A Casein kinase I isoform 100.0 5.3E-40 1.8E-44 353.9 18.0 260 526-810 9-279 (330)
92 1mqb_A Ephrin type-A receptor 100.0 4.7E-40 1.6E-44 354.4 17.6 262 526-814 44-311 (333)
93 1fot_A TPK1 delta, CAMP-depend 100.0 5.5E-40 1.9E-44 350.3 17.6 248 526-806 6-259 (318)
94 1o6v_A Internalin A; bacterial 100.0 5E-39 1.7E-43 363.3 26.4 346 15-395 44-389 (466)
95 4e5w_A Tyrosine-protein kinase 100.0 8.2E-41 2.8E-45 355.8 11.1 273 526-810 21-300 (302)
96 3p1a_A MYT1 kinase, membrane-a 100.0 8.1E-40 2.8E-44 349.1 18.8 249 524-806 55-305 (311)
97 3o0g_A Cell division protein k 100.0 6.4E-40 2.2E-44 346.9 17.7 266 526-806 2-283 (292)
98 1k9a_A Carboxyl-terminal SRC k 100.0 8.6E-40 2.9E-44 366.7 19.4 250 526-812 193-445 (450)
99 3c0i_A Peripheral plasma membr 100.0 2.7E-40 9.1E-45 358.8 14.7 256 524-806 22-287 (351)
100 1p4o_A Insulin-like growth fac 100.0 5.1E-40 1.7E-44 353.1 16.6 272 525-824 24-311 (322)
101 1csn_A Casein kinase-1; phosph 100.0 1E-39 3.4E-44 346.7 18.6 264 526-813 10-284 (298)
102 3a8x_A Protein kinase C IOTA t 100.0 7.9E-40 2.7E-44 353.3 18.0 257 526-806 9-276 (345)
103 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 6E-40 2.1E-44 368.1 17.7 256 526-813 184-441 (452)
104 1opk_A P150, C-ABL, proto-onco 100.0 4.2E-40 1.5E-44 373.3 16.5 255 526-811 220-477 (495)
105 3qd2_B Eukaryotic translation 100.0 1.2E-39 4.2E-44 351.8 19.4 254 524-806 4-326 (332)
106 2ivs_A Proto-oncogene tyrosine 100.0 6.3E-40 2.1E-44 351.0 16.9 257 526-810 23-309 (314)
107 3dtc_A Mitogen-activated prote 100.0 6E-40 2E-44 343.2 16.3 254 526-810 7-271 (271)
108 1u59_A Tyrosine-protein kinase 100.0 3.8E-40 1.3E-44 347.7 14.8 265 527-819 10-279 (287)
109 3qup_A Tyrosine-protein kinase 100.0 4.4E-40 1.5E-44 353.7 15.5 263 526-815 23-301 (323)
110 2x4f_A Myosin light chain kina 100.0 5.6E-40 1.9E-44 358.5 16.4 248 530-806 93-343 (373)
111 1rdq_E PKA C-alpha, CAMP-depen 100.0 7.1E-40 2.4E-44 354.1 16.9 249 526-807 41-295 (350)
112 3lxp_A Non-receptor tyrosine-p 100.0 2.5E-40 8.5E-45 354.4 13.2 269 528-811 33-309 (318)
113 3og7_A AKAP9-BRAF fusion prote 100.0 1.1E-39 3.8E-44 344.4 17.3 262 526-812 24-288 (289)
114 3lzb_A Epidermal growth factor 100.0 4E-40 1.4E-44 353.9 14.1 258 526-812 15-278 (327)
115 1rjb_A FL cytokine receptor; k 100.0 1.1E-39 3.8E-44 353.8 17.7 262 526-814 45-336 (344)
116 3gxj_A TGF-beta receptor type- 100.0 6.8E-41 2.3E-45 356.6 7.8 263 526-813 3-298 (303)
117 1xjd_A Protein kinase C, theta 100.0 2.6E-40 8.8E-45 356.3 12.3 252 525-806 16-270 (345)
118 2w4o_A Calcium/calmodulin-depe 100.0 7.2E-40 2.4E-44 354.9 15.9 251 525-806 52-306 (349)
119 2eva_A TAK1 kinase - TAB1 chim 100.0 3.9E-39 1.3E-43 343.2 21.2 253 526-812 8-263 (307)
120 3ork_A Serine/threonine protei 100.0 2.7E-40 9.2E-45 353.0 12.1 262 526-810 12-279 (311)
121 3kex_A Receptor tyrosine-prote 100.0 3.4E-40 1.2E-44 354.5 13.0 258 526-812 13-276 (325)
122 4f0f_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 339.9 21.0 259 526-810 19-287 (287)
123 3mdy_A Bone morphogenetic prot 100.0 3.1E-39 1.1E-43 349.3 20.5 267 521-812 32-331 (337)
124 3a62_A Ribosomal protein S6 ki 100.0 1.3E-39 4.3E-44 349.9 17.2 253 526-807 17-278 (327)
125 4aw2_A Serine/threonine-protei 100.0 5.5E-40 1.9E-44 363.8 14.8 260 525-807 73-340 (437)
126 2id5_A Lingo-1, leucine rich r 100.0 9.1E-39 3.1E-43 362.9 25.1 324 44-398 14-337 (477)
127 3v8s_A RHO-associated protein 100.0 5.4E-40 1.8E-44 361.2 14.4 258 525-808 68-332 (410)
128 3kmu_A ILK, integrin-linked ki 100.0 2.1E-39 7.2E-44 339.0 18.0 252 526-811 10-269 (271)
129 3c1x_A Hepatocyte growth facto 100.0 1.1E-39 3.9E-44 355.8 16.2 261 528-815 91-358 (373)
130 1t46_A HOMO sapiens V-KIT hard 100.0 1.4E-39 4.8E-44 348.1 16.5 259 526-811 23-306 (313)
131 2zv2_A Calcium/calmodulin-depe 100.0 1.3E-39 4.3E-44 345.8 16.0 259 526-806 13-293 (298)
132 3uc3_A Serine/threonine-protei 100.0 2E-39 6.9E-44 352.9 18.0 253 526-807 20-276 (361)
133 3kk8_A Calcium/calmodulin depe 100.0 3E-39 1E-43 340.4 18.6 256 525-808 5-264 (284)
134 2pvf_A Fibroblast growth facto 100.0 1.8E-39 6.1E-44 350.4 17.1 259 526-812 35-318 (334)
135 2y94_A 5'-AMP-activated protei 100.0 1.8E-39 6.2E-44 363.4 17.7 250 526-806 16-267 (476)
136 2i0e_A Protein kinase C-beta I 100.0 1E-39 3.6E-44 352.7 15.1 252 525-806 19-277 (353)
137 3op5_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44 356.3 15.3 276 526-810 35-327 (364)
138 3gni_B Strad alpha; kinase fol 100.0 3.8E-39 1.3E-43 355.5 19.6 274 526-811 25-341 (389)
139 3is5_A Calcium-dependent prote 100.0 2.7E-39 9.3E-44 340.6 17.6 254 523-806 19-279 (285)
140 2ozo_A Tyrosine-protein kinase 100.0 1.7E-39 5.9E-44 376.8 17.4 251 533-811 343-597 (613)
141 3cc6_A Protein tyrosine kinase 100.0 2.4E-39 8.3E-44 340.5 16.9 255 526-810 12-271 (281)
142 3fdn_A Serine/threonine-protei 100.0 2.6E-39 9E-44 339.8 17.1 252 525-808 8-260 (279)
143 1xbb_A Tyrosine-protein kinase 100.0 1.5E-39 5.3E-44 343.8 15.4 257 526-810 16-277 (291)
144 1qpc_A LCK kinase; alpha beta 100.0 1.8E-39 6.2E-44 341.1 15.6 254 526-811 13-268 (279)
145 3cok_A Serine/threonine-protei 100.0 2.8E-39 9.7E-44 339.4 17.0 253 525-806 10-263 (278)
146 3kfa_A Tyrosine-protein kinase 100.0 1.9E-39 6.4E-44 342.7 15.5 255 526-811 13-270 (288)
147 2a2a_A Death-associated protei 100.0 3.8E-39 1.3E-43 345.8 18.0 261 523-807 9-274 (321)
148 3kn6_A Ribosomal protein S6 ki 100.0 1.7E-39 5.9E-44 348.4 15.3 248 531-808 16-273 (325)
149 1jl5_A Outer protein YOPM; leu 100.0 1.4E-38 4.9E-43 356.0 23.2 369 2-426 19-420 (454)
150 2eue_A Carbon catabolite derep 100.0 1.9E-39 6.4E-44 340.2 14.9 249 526-806 13-263 (275)
151 4eut_A Serine/threonine-protei 100.0 3.1E-39 1.1E-43 356.5 17.4 272 526-813 9-310 (396)
152 4agu_A Cyclin-dependent kinase 100.0 2.2E-39 7.6E-44 346.2 15.6 266 525-807 2-286 (311)
153 2vd5_A DMPK protein; serine/th 100.0 2.2E-39 7.6E-44 356.5 16.0 259 525-807 60-329 (412)
154 3dbq_A Dual specificity protei 100.0 1.8E-39 6.1E-44 351.5 14.9 255 526-808 9-276 (343)
155 1nxk_A MAP kinase-activated pr 100.0 3.5E-39 1.2E-43 355.6 17.4 255 524-808 59-324 (400)
156 2i1m_A Macrophage colony-stimu 100.0 1.5E-39 5.1E-44 351.1 14.1 258 526-810 46-324 (333)
157 3dls_A PAS domain-containing s 100.0 1.6E-39 5.4E-44 350.1 14.3 255 522-808 20-277 (335)
158 3ttj_A Mitogen-activated prote 100.0 6.5E-39 2.2E-43 359.8 19.8 260 525-807 61-357 (464)
159 1u5q_A Serine/threonine protei 100.0 3.1E-39 1.1E-43 349.3 16.6 253 525-809 53-309 (348)
160 3brb_A Proto-oncogene tyrosine 100.0 5.5E-39 1.9E-43 343.5 18.2 258 526-810 34-306 (313)
161 3i6u_A CDS1, serine/threonine- 100.0 2.9E-39 9.9E-44 358.9 16.6 264 522-807 131-401 (419)
162 3f3z_A Calcium/calmodulin-depe 100.0 6.3E-39 2.2E-43 336.6 18.3 250 523-806 6-262 (277)
163 4fl3_A Tyrosine-protein kinase 100.0 2.9E-39 9.9E-44 375.7 17.3 251 532-810 375-629 (635)
164 2v62_A Serine/threonine-protei 100.0 1.5E-39 5.2E-44 352.4 14.0 277 526-812 37-328 (345)
165 2qr7_A Ribosomal protein S6 ki 100.0 2.4E-39 8.3E-44 349.0 15.4 256 523-808 19-280 (342)
166 3oz6_A Mitogen-activated prote 100.0 1.3E-39 4.4E-44 359.0 13.5 270 522-806 5-329 (388)
167 2acx_A G protein-coupled recep 100.0 2.8E-39 9.7E-44 366.1 16.6 255 526-806 184-445 (576)
168 1b6c_B TGF-B superfamily recep 100.0 1E-38 3.5E-43 346.1 20.2 267 521-812 37-336 (342)
169 2h34_A Serine/threonine-protei 100.0 7.1E-39 2.4E-43 341.6 18.6 266 523-814 31-298 (309)
170 3mtl_A Cell division protein k 100.0 1.7E-39 5.8E-44 348.7 13.9 264 526-807 2-283 (324)
171 3g33_A Cell division protein k 100.0 1.8E-39 6.2E-44 346.3 13.9 269 524-806 7-297 (308)
172 2pmi_A Negative RE, cyclin-dep 100.0 3.2E-39 1.1E-43 345.5 15.8 264 526-806 5-294 (317)
173 2r5t_A Serine/threonine-protei 100.0 2.5E-39 8.4E-44 352.3 15.0 246 526-801 38-285 (373)
174 4fvq_A Tyrosine-protein kinase 100.0 3.5E-39 1.2E-43 340.9 15.8 254 526-815 8-278 (289)
175 2yex_A Serine/threonine-protei 100.0 1.2E-38 4E-43 334.4 19.6 256 524-806 5-262 (276)
176 3f66_A Hepatocyte growth facto 100.0 6.1E-39 2.1E-43 340.6 17.4 259 527-812 26-291 (298)
177 2w5a_A Serine/threonine-protei 100.0 1.6E-39 5.5E-44 341.5 12.5 258 526-812 6-274 (279)
178 4hgt_A Casein kinase I isoform 100.0 1.1E-38 3.8E-43 338.2 19.1 266 523-812 6-280 (296)
179 2zmd_A Dual specificity protei 100.0 4.7E-39 1.6E-43 353.6 16.7 254 527-808 57-323 (390)
180 2h8h_A Proto-oncogene tyrosine 100.0 2.2E-39 7.4E-44 370.8 14.5 256 526-813 267-524 (535)
181 3hko_A Calcium/calmodulin-depe 100.0 5.2E-39 1.8E-43 348.8 16.7 267 521-807 21-332 (345)
182 2xir_A Vascular endothelial gr 100.0 3.9E-39 1.3E-43 345.2 15.3 260 525-811 26-309 (316)
183 2wqm_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43 342.0 17.3 267 525-816 31-301 (310)
184 4ejn_A RAC-alpha serine/threon 100.0 2.5E-39 8.7E-44 363.1 14.2 254 525-807 147-406 (446)
185 3pls_A Macrophage-stimulating 100.0 1.4E-38 4.9E-43 337.8 19.0 259 528-812 23-287 (298)
186 2y7j_A Phosphorylase B kinase 100.0 3.5E-38 1.2E-42 343.9 22.3 260 522-806 90-360 (365)
187 3bhy_A Death-associated protei 100.0 1.1E-38 3.7E-43 336.0 17.6 258 525-806 4-266 (283)
188 2id5_A Lingo-1, leucine rich r 100.0 7.4E-38 2.5E-42 355.3 25.7 354 19-404 13-366 (477)
189 1ua2_A CAK, cell division prot 100.0 8.1E-39 2.8E-43 346.8 17.0 274 522-808 6-294 (346)
190 3uzp_A CKI-delta, CKID, casein 100.0 1.8E-38 6.3E-43 336.6 19.2 266 526-815 9-283 (296)
191 2yfx_A Tyrosine-protein kinase 100.0 9E-39 3.1E-43 343.9 16.8 261 526-814 30-306 (327)
192 2ac3_A MAP kinase-interacting 100.0 6.6E-39 2.2E-43 343.4 15.6 265 526-807 12-297 (316)
193 1o6v_A Internalin A; bacterial 100.0 1.3E-37 4.5E-42 351.6 27.1 347 38-419 43-390 (466)
194 2buj_A Serine/threonine-protei 100.0 9.3E-39 3.2E-43 342.4 16.6 263 526-814 29-308 (317)
195 1fvr_A Tyrosine-protein kinase 100.0 7.9E-39 2.7E-43 344.3 16.1 259 526-815 25-303 (327)
196 3lm5_A Serine/threonine-protei 100.0 9.5E-39 3.3E-43 343.4 16.7 260 521-807 23-289 (327)
197 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.4E-38 1.1E-42 344.8 21.2 248 526-811 65-338 (365)
198 3mwu_A Calmodulin-domain prote 100.0 1.3E-38 4.3E-43 361.5 18.5 257 522-807 18-278 (486)
199 2w1i_A JAK2; chromosomal rearr 100.0 2.2E-39 7.4E-44 348.5 11.4 267 526-811 41-321 (326)
200 3bz5_A Internalin-J, INLJ; leu 100.0 5.4E-38 1.8E-42 351.7 23.0 351 12-425 37-395 (457)
201 2jam_A Calcium/calmodulin-depe 100.0 1.4E-38 4.6E-43 338.8 17.3 255 522-807 5-263 (304)
202 3rp9_A Mitogen-activated prote 100.0 1.5E-38 5.1E-43 358.5 18.6 197 526-735 53-280 (458)
203 1byg_A CSK, protein (C-termina 100.0 7.2E-39 2.5E-43 336.3 14.9 250 526-812 21-273 (278)
204 2a19_B Interferon-induced, dou 100.0 1.6E-38 5.3E-43 334.9 17.4 253 522-815 7-277 (284)
205 3gbz_A Kinase, CMGC CDK; ssgci 100.0 6.3E-39 2.2E-43 345.1 14.4 267 523-806 31-319 (329)
206 3g2f_A Bone morphogenetic prot 100.0 9.6E-39 3.3E-43 345.3 15.8 270 526-814 13-320 (336)
207 1t4h_A Serine/threonine-protei 100.0 3.8E-38 1.3E-42 333.0 20.0 248 528-806 28-283 (290)
208 1u46_A ACK-1, activated CDC42 100.0 3.6E-39 1.2E-43 341.1 12.2 265 526-815 18-287 (291)
209 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.7E-38 5.8E-43 359.2 18.3 256 526-806 185-449 (543)
210 3llt_A Serine/threonine kinase 100.0 2.9E-38 1E-42 344.9 19.2 197 525-742 34-262 (360)
211 2vgo_A Serine/threonine-protei 100.0 1.6E-38 5.3E-43 334.8 16.4 250 526-807 14-264 (284)
212 3lij_A Calcium/calmodulin depe 100.0 1.7E-38 6E-43 361.0 18.1 255 523-806 34-292 (494)
213 2h6d_A 5'-AMP-activated protei 100.0 1.7E-38 6E-43 333.1 16.3 250 526-806 11-262 (276)
214 3nyv_A Calmodulin-domain prote 100.0 2E-38 6.8E-43 360.2 18.1 257 524-808 24-284 (484)
215 3a7i_A MST3 kinase, serine/thr 100.0 1.6E-38 5.6E-43 338.1 16.2 251 526-808 22-273 (303)
216 1x8b_A WEE1HU, WEE1-like prote 100.0 2.3E-38 7.8E-43 334.5 17.2 249 523-807 8-281 (289)
217 1cm8_A Phosphorylated MAP kina 100.0 2.1E-38 7.1E-43 345.7 16.9 261 525-806 24-308 (367)
218 2rku_A Serine/threonine-protei 100.0 2.3E-38 7.8E-43 335.4 16.6 252 526-807 15-267 (294)
219 4aaa_A Cyclin-dependent kinase 100.0 7.2E-39 2.5E-43 345.2 12.8 266 525-806 24-307 (331)
220 3fme_A Dual specificity mitoge 100.0 1.8E-38 6.1E-43 335.6 15.4 252 526-806 7-267 (290)
221 1vzo_A Ribosomal protein S6 ki 100.0 5.4E-39 1.9E-43 349.0 11.6 260 526-809 54-325 (355)
222 3q5i_A Protein kinase; CDPK, m 100.0 4.3E-38 1.5E-42 358.7 19.3 261 523-807 33-303 (504)
223 3byv_A Rhoptry kinase; malaria 100.0 2.6E-39 8.8E-44 355.0 8.7 243 526-806 73-360 (377)
224 2xrw_A Mitogen-activated prote 100.0 6.8E-38 2.3E-42 342.7 19.8 260 525-807 24-320 (371)
225 2jii_A Serine/threonine-protei 100.0 1.5E-38 5.3E-43 345.6 14.5 265 526-814 42-338 (352)
226 2ycf_A Serine/threonine-protei 100.0 6.2E-38 2.1E-42 336.6 19.0 263 522-806 6-275 (322)
227 3mi9_A Cell division protein k 100.0 1.8E-38 6.2E-43 345.1 14.9 268 526-807 17-313 (351)
228 2owb_A Serine/threonine-protei 100.0 2.5E-38 8.6E-43 341.3 15.8 252 526-807 41-293 (335)
229 3eqc_A Dual specificity mitoge 100.0 2.1E-38 7.3E-43 345.9 15.3 262 526-807 33-326 (360)
230 3com_A Serine/threonine-protei 100.0 5.9E-38 2E-42 335.7 18.1 254 523-807 26-280 (314)
231 3q60_A ROP5B; pseudokinase, tr 100.0 1.5E-38 5.1E-43 348.3 13.6 255 527-806 63-353 (371)
232 3nsz_A CK II alpha, casein kin 100.0 5E-38 1.7E-42 338.8 17.4 257 526-806 36-320 (330)
233 3sv0_A Casein kinase I-like; t 100.0 1.3E-37 4.3E-42 349.1 21.1 260 526-810 7-276 (483)
234 2j7t_A Serine/threonine-protei 100.0 3.2E-38 1.1E-42 335.7 15.5 253 525-806 18-276 (302)
235 3n9x_A Phosphotransferase; mal 100.0 1.4E-37 4.9E-42 346.9 20.6 203 525-740 25-253 (432)
236 3pg1_A Mitogen-activated prote 100.0 6.1E-38 2.1E-42 342.6 17.1 278 521-807 17-318 (362)
237 2r3i_A Cell division protein k 100.0 7.7E-38 2.6E-42 332.3 17.4 265 526-806 3-284 (299)
238 1phk_A Phosphorylase kinase; g 100.0 9.5E-38 3.2E-42 331.4 17.9 262 524-806 15-284 (298)
239 3an0_A Dual specificity mitoge 100.0 5.3E-38 1.8E-42 340.0 16.1 250 526-806 51-311 (340)
240 3qyz_A Mitogen-activated prote 100.0 3.4E-38 1.2E-42 344.5 14.7 266 526-807 27-315 (364)
241 3bz5_A Internalin-J, INLJ; leu 100.0 3.2E-37 1.1E-41 345.4 22.8 338 24-419 25-370 (457)
242 3rgf_A Cyclin-dependent kinase 100.0 7.9E-38 2.7E-42 346.7 17.5 269 524-808 18-336 (405)
243 3pfq_A PKC-B, PKC-beta, protei 100.0 4.6E-38 1.6E-42 368.2 16.5 252 525-806 340-598 (674)
244 2fst_X Mitogen-activated prote 100.0 1.6E-38 5.5E-43 346.1 11.2 262 525-807 28-313 (367)
245 2clq_A Mitogen-activated prote 100.0 7.1E-38 2.4E-42 331.9 15.7 250 528-806 24-279 (295)
246 2vwi_A Serine/threonine-protei 100.0 4.6E-38 1.6E-42 334.7 14.1 263 526-806 15-288 (303)
247 2wtk_C Serine/threonine-protei 100.0 1.9E-37 6.4E-42 330.3 18.7 257 524-807 3-265 (305)
248 2j0j_A Focal adhesion kinase 1 100.0 6.4E-38 2.2E-42 365.8 16.5 255 526-810 390-649 (656)
249 2wei_A Calmodulin-domain prote 100.0 1.3E-37 4.5E-42 328.2 17.1 258 520-806 16-277 (287)
250 3ll6_A Cyclin G-associated kin 100.0 1E-37 3.6E-42 337.4 16.6 258 527-816 29-312 (337)
251 3kvw_A DYRK2, dual specificity 100.0 1.3E-37 4.4E-42 346.5 17.4 197 525-742 96-302 (429)
252 1blx_A Cyclin-dependent kinase 100.0 1E-37 3.5E-42 335.7 16.0 271 526-814 11-307 (326)
253 1jl5_A Outer protein YOPM; leu 100.0 2E-36 6.9E-41 338.6 27.0 364 2-425 42-437 (454)
254 4e7w_A Glycogen synthase kinas 100.0 4E-38 1.4E-42 346.9 13.0 259 526-806 40-322 (394)
255 1wak_A Serine/threonine-protei 100.0 1.9E-37 6.6E-42 343.4 18.2 260 526-806 37-392 (397)
256 3eb0_A Putative uncharacterize 100.0 4.8E-38 1.6E-42 345.7 13.2 259 525-806 6-322 (383)
257 4exu_A Mitogen-activated prote 100.0 3.3E-37 1.1E-41 337.3 19.1 261 525-807 41-325 (371)
258 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.4E-38 1.2E-42 338.4 10.0 262 526-815 33-305 (319)
259 1j1b_A Glycogen synthase kinas 100.0 7.5E-38 2.6E-42 347.6 12.8 258 527-807 55-338 (420)
260 2i6l_A Mitogen-activated prote 100.0 6.4E-38 2.2E-42 336.4 11.6 264 526-806 11-306 (320)
261 1zy4_A Serine/threonine-protei 100.0 4.5E-37 1.5E-41 327.0 17.7 255 524-807 4-285 (303)
262 2x7f_A TRAF2 and NCK-interacti 100.0 2.1E-37 7.1E-42 333.3 15.2 251 525-806 23-287 (326)
263 3o6n_A APL1; leucine-rich repe 100.0 2.3E-36 7.8E-41 333.6 23.6 310 39-395 43-353 (390)
264 3cek_A Dual specificity protei 100.0 2.6E-37 9E-42 330.3 15.6 255 526-808 28-295 (313)
265 3p23_A Serine/threonine-protei 100.0 1.8E-37 6E-42 344.9 14.4 250 527-806 25-284 (432)
266 3e3p_A Protein kinase, putativ 100.0 2.4E-37 8.3E-42 337.7 14.9 268 520-807 17-316 (360)
267 3coi_A Mitogen-activated prote 100.0 3.8E-37 1.3E-41 334.9 16.1 260 526-807 24-307 (353)
268 1z57_A Dual specificity protei 100.0 8.1E-37 2.8E-41 330.7 17.7 259 526-806 14-329 (339)
269 2pml_X PFPK7, Ser/Thr protein 100.0 4.7E-37 1.6E-41 333.8 15.7 272 526-806 31-323 (348)
270 3oja_B Anopheles plasmodium-re 100.0 4.4E-36 1.5E-40 349.5 24.1 333 41-442 51-383 (597)
271 2b9h_A MAP kinase FUS3, mitoge 100.0 1E-36 3.5E-41 331.8 17.6 266 525-807 10-307 (353)
272 2vx3_A Dual specificity tyrosi 100.0 1.6E-36 5.5E-41 333.4 19.2 199 525-742 53-261 (382)
273 3aln_A Dual specificity mitoge 100.0 5.1E-37 1.7E-41 330.3 14.9 253 526-806 22-286 (327)
274 2rio_A Serine/threonine-protei 100.0 6.7E-37 2.3E-41 341.5 15.6 251 528-806 17-296 (434)
275 3fhr_A MAP kinase-activated pr 100.0 4.3E-37 1.5E-41 331.5 13.2 255 524-808 26-290 (336)
276 1q8y_A SR protein kinase; tran 100.0 2.2E-36 7.5E-41 331.9 18.4 261 526-808 19-336 (373)
277 2dyl_A Dual specificity mitoge 100.0 1.2E-36 4.1E-41 326.2 15.1 253 526-806 25-284 (318)
278 3o6n_A APL1; leucine-rich repe 100.0 1E-35 3.4E-40 328.4 22.8 334 66-442 43-377 (390)
279 2iwi_A Serine/threonine-protei 100.0 5.4E-37 1.8E-41 327.8 11.1 252 522-808 27-286 (312)
280 3a99_A Proto-oncogene serine/t 100.0 4.9E-37 1.7E-41 329.0 10.5 249 524-807 41-295 (320)
281 2eu9_A Dual specificity protei 100.0 3.1E-36 1.1E-40 328.3 16.6 258 526-806 19-334 (355)
282 4fmz_A Internalin; leucine ric 100.0 3.4E-35 1.2E-39 319.0 24.1 307 13-394 40-346 (347)
283 3oja_B Anopheles plasmodium-re 100.0 3.9E-35 1.3E-39 341.5 23.2 314 15-398 49-362 (597)
284 3qa8_A MGC80376 protein; kinas 100.0 2.2E-36 7.6E-41 345.3 12.2 260 524-803 12-295 (676)
285 4fmz_A Internalin; leucine ric 100.0 1.1E-34 3.7E-39 314.9 24.9 306 64-417 40-346 (347)
286 3uqc_A Probable conserved tran 100.0 6E-35 2E-39 306.7 16.3 239 526-817 31-270 (286)
287 2ft3_A Biglycan; proteoglycan, 100.0 2.1E-33 7.1E-38 302.5 25.6 288 69-392 34-331 (332)
288 2pzi_A Probable serine/threoni 100.0 9.1E-35 3.1E-39 343.0 15.7 238 526-809 80-325 (681)
289 3dzo_A Rhoptry kinase domain; 100.0 2.7E-35 9.3E-40 326.2 10.3 241 527-805 79-363 (413)
290 3m2w_A MAP kinase-activated pr 100.0 1.5E-34 5E-39 306.7 14.1 230 524-808 15-259 (299)
291 1xku_A Decorin; proteoglycan, 100.0 7.2E-33 2.5E-37 298.1 25.3 289 69-392 32-330 (330)
292 2ft3_A Biglycan; proteoglycan, 100.0 9.8E-33 3.4E-37 297.2 25.5 294 42-368 34-331 (332)
293 2vuw_A Serine/threonine-protei 100.0 6E-35 2.1E-39 315.2 7.0 250 525-806 19-332 (336)
294 1xku_A Decorin; proteoglycan, 100.0 2.6E-32 9E-37 293.7 25.7 275 68-368 52-330 (330)
295 1ogq_A PGIP-2, polygalacturona 100.0 1E-33 3.6E-38 301.5 13.5 248 117-392 51-302 (313)
296 1ogq_A PGIP-2, polygalacturona 100.0 5.6E-33 1.9E-37 295.9 18.0 253 92-372 50-307 (313)
297 1z7x_W Ribonuclease inhibitor; 100.0 4.7E-36 1.6E-40 339.3 -11.9 380 17-419 3-442 (461)
298 1z7x_W Ribonuclease inhibitor; 100.0 1.3E-35 4.4E-40 335.7 -9.2 356 41-419 3-413 (461)
299 2z66_A Variable lymphocyte rec 100.0 3.2E-30 1.1E-34 274.4 15.0 259 142-424 29-294 (306)
300 2z80_A TOLL-like receptor 2, v 100.0 9.3E-31 3.2E-35 284.4 10.8 280 91-398 30-318 (353)
301 2z80_A TOLL-like receptor 2, v 100.0 4.5E-30 1.6E-34 278.9 15.5 205 15-227 29-236 (353)
302 2z66_A Variable lymphocyte rec 100.0 3.3E-29 1.1E-33 266.5 18.1 247 20-298 10-261 (306)
303 3zyi_A Leucine-rich repeat-con 100.0 1.3E-28 4.3E-33 276.9 21.4 252 117-398 55-307 (452)
304 3zyj_A Leucine-rich repeat-con 100.0 1.4E-28 4.9E-33 275.4 20.5 251 117-397 44-295 (440)
305 1ozn_A Reticulon 4 receptor; N 100.0 9.2E-29 3.2E-33 260.1 16.4 256 143-425 13-269 (285)
306 1ozn_A Reticulon 4 receptor; N 100.0 1E-28 3.6E-33 259.7 16.8 254 95-377 14-268 (285)
307 3ogk_B Coronatine-insensitive 100.0 1.8E-31 6.3E-36 311.6 -6.0 402 13-419 69-528 (592)
308 4fcg_A Uncharacterized protein 100.0 1.8E-28 6.2E-33 262.6 17.6 235 140-394 80-314 (328)
309 3zyj_A Leucine-rich repeat-con 100.0 4.4E-28 1.5E-32 271.5 21.1 248 93-370 44-292 (440)
310 3zyi_A Leucine-rich repeat-con 100.0 5.2E-28 1.8E-32 271.9 20.9 249 93-371 55-304 (452)
311 4azs_A Methyltransferase WBDD; 100.0 1.3E-29 4.4E-34 290.1 5.9 195 533-738 241-437 (569)
312 4fcg_A Uncharacterized protein 100.0 7.1E-28 2.4E-32 257.9 18.1 225 116-370 81-314 (328)
313 3g06_A SSPH2 (leucine-rich rep 100.0 2.8E-27 9.7E-32 272.3 24.3 266 70-404 42-307 (622)
314 3g06_A SSPH2 (leucine-rich rep 100.0 2.9E-27 9.8E-32 272.2 23.9 268 18-381 41-308 (622)
315 1wwl_A Monocyte differentiatio 100.0 9.3E-30 3.2E-34 271.1 2.6 245 140-394 42-309 (312)
316 3ogk_B Coronatine-insensitive 100.0 1.5E-30 5.2E-35 303.9 -4.3 383 15-401 110-533 (592)
317 3o53_A Protein LRIM1, AGAP0063 99.9 4E-29 1.4E-33 266.8 6.4 268 70-400 12-282 (317)
318 3o53_A Protein LRIM1, AGAP0063 99.9 5.5E-29 1.9E-33 265.8 7.3 193 18-226 11-204 (317)
319 1wwl_A Monocyte differentiatio 99.9 6.2E-29 2.1E-33 264.7 5.5 251 89-371 40-310 (312)
320 3oja_A Leucine-rich immune mol 99.9 7E-28 2.4E-32 272.1 7.3 233 142-388 35-269 (487)
321 3oja_A Leucine-rich immune mol 99.9 5.8E-27 2E-31 264.6 12.1 235 93-366 35-271 (487)
322 2z62_A TOLL-like receptor 4, v 99.9 1E-25 3.6E-30 235.5 19.0 208 166-398 29-241 (276)
323 2p1m_B Transport inhibitor res 99.9 1.6E-28 5.6E-33 286.9 -10.1 397 13-416 62-518 (594)
324 2z62_A TOLL-like receptor 4, v 99.9 4.5E-25 1.5E-29 230.7 16.9 205 18-226 29-237 (276)
325 2p1m_B Transport inhibitor res 99.9 5.8E-28 2E-32 282.2 -7.0 378 15-399 103-524 (594)
326 2o6q_A Variable lymphocyte rec 99.9 3.1E-24 1.1E-28 223.3 21.8 205 17-228 16-220 (270)
327 3en9_A Glycoprotease, O-sialog 99.9 8E-26 2.8E-30 257.3 10.4 195 529-740 339-539 (540)
328 2o6q_A Variable lymphocyte rec 99.9 2.3E-24 8E-29 224.3 19.2 206 166-398 17-222 (270)
329 3rfs_A Internalin B, repeat mo 99.9 7.1E-25 2.4E-29 228.4 14.8 228 17-261 19-246 (272)
330 1p9a_G Platelet glycoprotein I 99.9 4.6E-24 1.6E-28 223.9 19.3 204 12-226 5-208 (290)
331 1p9a_G Platelet glycoprotein I 99.9 3.9E-24 1.3E-28 224.4 17.1 205 161-396 6-210 (290)
332 3rfs_A Internalin B, repeat mo 99.9 6.6E-24 2.2E-28 221.0 18.4 213 12-239 36-248 (272)
333 3goz_A Leucine-rich repeat-con 99.9 1E-25 3.4E-30 245.3 -1.1 261 121-402 3-305 (362)
334 4glp_A Monocyte differentiatio 99.9 8.7E-24 3E-28 224.7 12.2 228 165-418 64-308 (310)
335 3goz_A Leucine-rich repeat-con 99.9 1E-24 3.5E-29 237.3 4.1 255 22-300 3-299 (362)
336 2xwt_C Thyrotropin receptor; s 99.9 1.5E-23 5.2E-28 213.9 12.5 178 42-226 32-218 (239)
337 2xwt_C Thyrotropin receptor; s 99.9 4.7E-23 1.6E-27 210.3 14.5 206 152-391 22-236 (239)
338 3m19_A Variable lymphocyte rec 99.9 5.6E-23 1.9E-27 211.3 15.2 181 189-396 14-194 (251)
339 2ca6_A RAN GTPase-activating p 99.9 2.1E-25 7.3E-30 245.2 -3.2 249 130-398 21-320 (386)
340 2ca6_A RAN GTPase-activating p 99.9 2.3E-25 7.8E-30 245.0 -3.2 248 83-373 23-319 (386)
341 4glp_A Monocyte differentiatio 99.9 4.9E-23 1.7E-27 218.9 13.5 202 93-322 92-307 (310)
342 2ast_B S-phase kinase-associat 99.9 7.6E-24 2.6E-28 228.3 5.2 255 19-307 49-315 (336)
343 1h6u_A Internalin H; cell adhe 99.9 1.5E-22 5.3E-27 214.5 14.8 194 13-226 37-230 (308)
344 2ast_B S-phase kinase-associat 99.9 6.9E-24 2.4E-28 228.7 3.7 255 93-379 48-315 (336)
345 3m19_A Variable lymphocyte rec 99.9 1.2E-21 3.9E-26 201.5 18.3 178 18-226 15-192 (251)
346 4ay9_X Follicle-stimulating ho 99.9 8.9E-22 3E-26 212.9 17.4 241 119-392 12-257 (350)
347 1h6u_A Internalin H; cell adhe 99.9 9.6E-22 3.3E-26 208.4 16.3 172 88-274 59-230 (308)
348 4ay9_X Follicle-stimulating ho 99.9 8.7E-22 3E-26 213.0 16.1 152 71-226 12-167 (350)
349 1zar_A RIO2 kinase; serine kin 99.9 2.1E-22 7.1E-27 209.8 10.7 165 528-724 92-274 (282)
350 2o6s_A Variable lymphocyte rec 99.8 1.8E-20 6E-25 186.7 14.4 181 168-382 10-190 (208)
351 3cvr_A Invasion plasmid antige 99.8 1.8E-20 6.1E-25 213.0 14.9 187 142-404 60-253 (571)
352 2o6s_A Variable lymphocyte rec 99.8 5.2E-20 1.8E-24 183.3 16.4 162 92-261 28-189 (208)
353 3cvr_A Invasion plasmid antige 99.8 1.1E-19 3.7E-24 206.5 15.1 178 18-227 60-244 (571)
354 1m9s_A Internalin B; cell inva 99.8 5.9E-20 2E-24 211.2 11.9 193 16-228 20-212 (605)
355 1h6t_A Internalin B; cell adhe 99.8 1.2E-19 4.3E-24 190.3 12.7 190 18-227 25-214 (291)
356 2v9t_B SLIT homolog 2 protein 99.8 1.2E-19 4.2E-24 181.9 12.1 136 261-396 32-167 (220)
357 1m9s_A Internalin B; cell inva 99.8 2.4E-19 8.4E-24 206.1 15.8 184 12-213 38-221 (605)
358 2v70_A SLIT-2, SLIT homolog 2 99.8 2.2E-19 7.4E-24 180.1 13.4 137 262-398 33-170 (220)
359 1h6t_A Internalin B; cell adhe 99.8 1.4E-19 4.9E-24 189.8 11.9 175 12-204 41-215 (291)
360 2xot_A Amphoterin-induced prot 99.8 3.2E-19 1.1E-23 193.6 14.5 176 20-226 21-202 (361)
361 3e6j_A Variable lymphocyte rec 99.8 7.9E-19 2.7E-23 177.3 14.1 137 261-398 40-176 (229)
362 2v9t_B SLIT homolog 2 protein 99.8 1.3E-18 4.6E-23 174.3 15.3 152 20-202 14-165 (220)
363 2xot_A Amphoterin-induced prot 99.8 6.9E-19 2.3E-23 191.0 13.4 177 71-251 21-203 (361)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 2.2E-18 7.4E-23 172.8 15.9 152 20-178 14-166 (220)
365 1dce_A Protein (RAB geranylger 99.8 3.4E-21 1.2E-25 220.3 -5.8 107 287-398 443-550 (567)
366 1xeu_A Internalin C; cellular 99.8 2.6E-19 8.7E-24 184.8 7.5 151 64-228 37-187 (263)
367 1w8a_A SLIT protein; signaling 99.8 8.7E-19 3E-23 171.7 9.8 174 264-441 11-185 (192)
368 1xeu_A Internalin C; cellular 99.8 3E-19 1E-23 184.3 6.3 171 15-204 17-187 (263)
369 4ezg_A Putative uncharacterize 99.8 2.3E-18 8E-23 169.5 12.4 152 15-177 42-193 (197)
370 3sb4_A Hypothetical leucine ri 99.8 2.8E-19 9.7E-24 191.5 6.1 221 164-388 100-328 (329)
371 1dce_A Protein (RAB geranylger 99.8 6.6E-21 2.3E-25 217.9 -7.5 190 13-226 345-546 (567)
372 1zth_A RIO1 serine protein kin 99.8 9E-19 3.1E-23 180.2 9.1 146 528-686 49-219 (258)
373 3e6j_A Variable lymphocyte rec 99.8 9.5E-18 3.2E-22 169.3 15.6 153 19-203 21-173 (229)
374 4ezg_A Putative uncharacterize 99.7 4.4E-18 1.5E-22 167.5 10.9 134 256-395 61-195 (197)
375 3sb4_A Hypothetical leucine ri 99.7 3.9E-18 1.3E-22 182.6 8.7 265 16-292 48-328 (329)
376 4b8c_D Glucose-repressible alc 99.7 2.8E-18 9.5E-23 202.5 5.7 148 198-350 210-358 (727)
377 4fdw_A Leucine rich hypothetic 99.7 4.9E-16 1.7E-20 169.7 21.6 268 41-345 113-382 (401)
378 4fdw_A Leucine rich hypothetic 99.7 7.3E-16 2.5E-20 168.4 22.8 268 14-322 110-383 (401)
379 4b8c_D Glucose-repressible alc 99.7 7E-18 2.4E-22 199.1 7.1 162 98-271 207-369 (727)
380 4fs7_A Uncharacterized protein 99.7 1.1E-15 3.8E-20 167.9 22.8 334 29-385 59-392 (394)
381 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.8E-21 153.1 8.9 136 261-399 24-164 (168)
382 4fs7_A Uncharacterized protein 99.7 2E-15 6.9E-20 165.8 19.6 319 55-391 58-376 (394)
383 1w8a_A SLIT protein; signaling 99.7 3.1E-16 1.1E-20 153.4 11.4 91 257-347 50-140 (192)
384 2o6r_A Variable lymphocyte rec 99.6 5.7E-16 2E-20 149.5 11.4 133 263-398 9-141 (177)
385 4gyi_A RIO2 kinase; protein ki 99.6 9.6E-17 3.3E-21 170.6 5.9 146 528-685 97-264 (397)
386 2wfh_A SLIT homolog 2 protein 99.6 7.3E-16 2.5E-20 150.7 11.3 130 264-397 13-142 (193)
387 2je0_A Acidic leucine-rich nuc 99.6 2.4E-16 8.1E-21 147.5 7.5 129 260-390 16-149 (149)
388 2ell_A Acidic leucine-rich nuc 99.6 1.2E-15 4.2E-20 145.8 10.5 132 41-180 24-162 (168)
389 2wfh_A SLIT homolog 2 protein 99.6 2.4E-15 8.2E-20 147.0 12.6 126 96-226 14-139 (193)
390 2je0_A Acidic leucine-rich nuc 99.6 1.3E-15 4.4E-20 142.5 7.9 127 68-197 17-148 (149)
391 2o6r_A Variable lymphocyte rec 99.6 1.3E-14 4.3E-19 140.1 12.5 129 95-227 10-138 (177)
392 1a9n_A U2A', U2A'; complex (nu 99.6 3.1E-15 1E-19 144.2 7.4 134 256-395 14-154 (176)
393 1a9n_A U2A', U2A'; complex (nu 99.5 7.9E-15 2.7E-19 141.3 8.3 106 69-179 43-154 (176)
394 4gt6_A Cell surface protein; l 99.5 4.6E-13 1.6E-17 146.9 21.3 163 56-225 51-217 (394)
395 4gt6_A Cell surface protein; l 99.5 7.9E-13 2.7E-17 145.0 22.3 336 30-394 52-391 (394)
396 1ds9_A Outer arm dynein; leuci 99.5 2.5E-16 8.7E-21 155.0 -5.2 132 256-394 43-185 (198)
397 1ds9_A Outer arm dynein; leuci 99.5 1.6E-16 5.5E-21 156.5 -7.0 152 67-226 17-185 (198)
398 3g39_A Variable lymphocyte rec 99.5 1E-13 3.5E-18 132.4 10.1 109 287-398 11-119 (170)
399 2r9u_A Variable lymphocyte rec 99.4 3.2E-13 1.1E-17 129.4 10.2 106 288-396 15-120 (174)
400 3g39_A Variable lymphocyte rec 99.4 4.6E-13 1.6E-17 127.9 9.9 108 263-373 11-118 (170)
401 2r9u_A Variable lymphocyte rec 99.4 1.3E-12 4.6E-17 125.0 11.0 104 119-226 15-118 (174)
402 3un9_A NLR family member X1; l 99.3 7.9E-14 2.7E-18 150.8 -2.0 183 41-226 72-283 (372)
403 3un9_A NLR family member X1; l 99.3 3.1E-14 1E-18 154.0 -6.4 111 92-202 72-196 (372)
404 4h09_A Hypothetical leucine ri 99.3 2E-10 6.8E-15 125.3 23.3 317 11-357 40-356 (379)
405 4h09_A Hypothetical leucine ri 99.3 3.7E-10 1.3E-14 123.1 23.8 314 37-380 42-355 (379)
406 2ifg_A High affinity nerve gro 99.2 1.2E-11 4.3E-16 133.1 8.2 102 266-370 13-116 (347)
407 2ifg_A High affinity nerve gro 99.2 3E-11 1E-15 130.1 9.5 102 20-127 11-114 (347)
408 3tm0_A Aminoglycoside 3'-phosp 99.1 1.8E-10 6.3E-15 118.5 11.2 146 522-684 10-212 (263)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 3.9E-10 1.3E-14 116.0 9.0 128 535-684 29-213 (264)
410 2ra8_A Uncharacterized protein 98.9 4.4E-10 1.5E-14 120.2 5.5 183 17-202 107-320 (362)
411 2ra8_A Uncharacterized protein 98.9 4.2E-10 1.4E-14 120.4 3.3 179 13-200 135-341 (362)
412 3dxp_A Putative acyl-COA dehyd 98.9 4.9E-09 1.7E-13 113.2 10.5 144 531-685 43-248 (359)
413 3sg8_A APH(2'')-ID; antibiotic 98.7 8.4E-09 2.9E-13 108.5 6.8 187 531-740 25-288 (304)
414 3r70_A Aminoglycoside phosphot 98.5 4E-07 1.4E-11 96.2 11.5 136 527-685 38-237 (320)
415 3rw6_A Nuclear RNA export fact 98.4 2.7E-08 9.4E-13 100.6 0.1 65 332-398 169-237 (267)
416 1io0_A Tropomodulin; LRR prote 98.4 2.7E-08 9.2E-13 95.9 -0.1 112 283-394 34-164 (185)
417 1io0_A Tropomodulin; LRR prote 98.3 1.7E-07 5.7E-12 90.3 2.6 118 14-154 33-164 (185)
418 3rw6_A Nuclear RNA export fact 98.3 1.3E-07 4.5E-12 95.6 1.6 107 13-122 137-257 (267)
419 4gkh_A Aminoglycoside 3'-phosp 98.3 3.9E-06 1.3E-10 86.3 11.8 134 533-684 31-222 (272)
420 3tdw_A Gentamicin resistance p 98.3 5.5E-06 1.9E-10 86.7 12.8 135 531-684 24-223 (306)
421 3d1u_A Putative fructosamine-3 98.2 6.7E-06 2.3E-10 85.0 11.4 76 530-619 19-97 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 98.1 9.5E-06 3.3E-10 86.9 10.4 75 530-620 45-122 (362)
423 3ats_A Putative uncharacterize 98.0 1.3E-05 4.4E-10 86.1 8.7 82 532-620 26-121 (357)
424 3e4g_A ATP synthase subunit S, 98.0 2.1E-06 7.2E-11 80.3 2.1 84 92-175 61-149 (176)
425 3e4g_A ATP synthase subunit S, 97.9 2.3E-06 7.8E-11 80.0 2.1 91 134-224 54-150 (176)
426 2q83_A YTAA protein; 2635576, 97.8 3.2E-05 1.1E-09 82.5 8.6 31 654-684 221-251 (346)
427 2olc_A MTR kinase, methylthior 97.7 0.00011 3.8E-09 80.0 9.8 82 531-617 35-120 (397)
428 3jr1_A Putative fructosamine-3 97.6 0.00026 8.9E-09 73.6 11.4 136 531-681 41-232 (312)
429 1pgv_A TMD-1, tropomodulin TMD 97.3 4.3E-05 1.5E-09 72.8 0.3 63 161-223 66-136 (197)
430 3f7w_A Putative fructosamine-3 97.2 0.00077 2.6E-08 69.6 9.3 78 528-619 17-97 (288)
431 2pyw_A Uncharacterized protein 97.2 0.0024 8.2E-08 69.9 13.5 79 655-736 232-313 (420)
432 1pgv_A TMD-1, tropomodulin TMD 97.2 0.00015 5E-09 69.1 3.0 62 164-225 97-169 (197)
433 3rfe_A Platelet glycoprotein I 97.1 0.00061 2.1E-08 60.6 5.7 58 336-395 11-69 (130)
434 1nw1_A Choline kinase (49.2 KD 97.1 0.0011 3.8E-08 72.5 8.9 73 531-619 78-159 (429)
435 3dxq_A Choline/ethanolamine ki 97.0 0.001 3.5E-08 69.2 8.0 71 531-619 23-95 (301)
436 3csv_A Aminoglycoside phosphot 96.9 0.0013 4.3E-08 69.6 7.3 31 655-685 183-217 (333)
437 3feg_A Choline/ethanolamine ki 96.9 0.0018 6E-08 69.3 8.1 138 532-684 56-253 (379)
438 2ppq_A HSK, HK, homoserine kin 96.6 0.002 6.8E-08 67.7 6.4 140 532-684 28-216 (322)
439 1zyl_A Hypothetical protein YI 96.6 0.008 2.7E-07 63.2 10.6 138 533-684 33-222 (328)
440 2qg7_A Ethanolamine kinase PV0 96.5 0.0063 2.1E-07 66.8 9.8 74 531-619 113-188 (458)
441 3rfe_A Platelet glycoprotein I 96.5 0.0032 1.1E-07 55.9 6.1 36 166-201 32-67 (130)
442 3c5i_A Choline kinase; choline 96.3 0.0032 1.1E-07 67.5 5.9 73 532-619 39-121 (369)
443 2yle_A Protein spire homolog 1 96.2 0.025 8.5E-07 54.0 10.4 101 617-736 33-133 (229)
444 3i1a_A Spectinomycin phosphotr 95.9 0.019 6.6E-07 60.5 9.0 31 655-685 206-236 (339)
445 3f2s_A CK, chetk-alpha, cholin 95.7 0.029 9.8E-07 60.1 9.4 148 532-684 58-279 (401)
446 3mes_A Choline kinase; malaria 95.2 0.024 8.3E-07 61.3 6.8 74 531-619 75-157 (424)
447 3g15_A CK, chetk-alpha, cholin 92.4 0.14 4.9E-06 55.1 6.3 29 657-685 246-280 (401)
448 2jwa_A Receptor tyrosine-prote 83.6 1.4 4.8E-05 29.7 3.9 11 481-491 31-41 (44)
449 3cxl_A N-chimerin; SH2, RHO-GA 71.7 0.48 1.6E-05 51.9 -1.8 61 531-602 147-214 (463)
450 4ano_A ESSB; membrane protein, 65.8 13 0.00044 35.5 7.0 116 590-741 48-164 (219)
451 4ann_A ESSB; membrane protein, 63.4 9.4 0.00032 36.3 5.5 117 590-741 43-159 (215)
452 2lz0_A Uncharacterized protein 60.3 17 0.00059 29.7 6.0 45 29-77 8-52 (100)
453 2lz0_A Uncharacterized protein 54.0 26 0.00091 28.6 6.1 47 55-102 7-53 (100)
454 2l2t_A Receptor tyrosine-prote 42.1 26 0.00088 23.7 3.3 20 474-493 20-39 (44)
455 2ks1_B Epidermal growth factor 40.8 28 0.00096 23.5 3.3 7 482-488 32-38 (44)
456 2k1k_A Ephrin type-A receptor 28.8 50 0.0017 21.5 3.0 6 482-487 31-36 (38)
457 2x6h_A GH13170P, VPS34, phosph 22.1 1.6E+02 0.0053 33.5 7.4 44 633-683 529-574 (696)
458 2klu_A T-cell surface glycopro 21.6 1.3E+02 0.0045 22.1 4.3 11 484-494 31-41 (70)
459 2fq3_A Transcription regulator 21.2 56 0.0019 26.8 2.6 46 763-808 33-78 (104)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=9.1e-57 Score=539.12 Aligned_cols=437 Identities=35% Similarity=0.525 Sum_probs=351.2
Q ss_pred CccccccccCCCCCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccc
Q 003199 1 MSFMYLTGTLPDFSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCAL 80 (840)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l 80 (840)
++.|.+++.+|.|..+++|++|+|++|.+++.+|..+.++++|++|+|++|.+ ....+.. .+++|++|+|++|.+
T Consensus 207 Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l---~~~~~~~--~l~~L~~L~L~~n~l 281 (768)
T 3rgz_A 207 VSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQF---VGPIPPL--PLKSLQYLSLAENKF 281 (768)
T ss_dssp CCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCC---EESCCCC--CCTTCCEEECCSSEE
T ss_pred CcCCcCCCCCcccccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcc---cCccCcc--ccCCCCEEECcCCcc
Confidence 35677888888899999999999999999988899999999999999999843 3211111 455555555555555
Q ss_pred cccCCccccCC-CCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcc-cCCCCCCCeeeccCCcc-----
Q 003199 81 HGQIPASIGNV-TSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEE-LGNLTELTDLDMSVNHL----- 153 (840)
Q Consensus 81 ~~~~~~~~~~l-~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~-l~~l~~L~~L~L~~n~l----- 153 (840)
++.+|..+..+ ++|++|+|++|.+++..|..|..+++|++|+|++|+ +.+.+|.. +..+++|++|+|++|.+
T Consensus 282 ~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p 360 (768)
T 3rgz_A 282 TGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNN-FSGELPMDTLLKMRGLKVLDLSFNEFSGELP 360 (768)
T ss_dssp EESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSE-EEEECCHHHHTTCTTCCEEECCSSEEEECCC
T ss_pred CCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCc-ccCcCCHHHHhcCCCCCEEeCcCCccCcccc
Confidence 55555555443 555555555555555555555555555555555554 33344433 44455555555555544
Q ss_pred --------------------cccCCccccC--CCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCC
Q 003199 154 --------------------SGKIPESILR--LPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQ 211 (840)
Q Consensus 154 --------------------~~~~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 211 (840)
++..|..+.. +++|++|++++|.+++..|..+.++++|++|+|++|++++..|..+..
T Consensus 361 ~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~ 440 (768)
T 3rgz_A 361 ESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGS 440 (768)
T ss_dssp TTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGG
T ss_pred HHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhc
Confidence 4444444444 567788888888887788888999999999999999999889999999
Q ss_pred CCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEe
Q 003199 212 WSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIID 291 (840)
Q Consensus 212 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 291 (840)
+++|+.|+|++|++++.+|..+..+++|++|++++|.+.+.+|..+..+++|++|++++|++++.+|.++..+++|+.|+
T Consensus 441 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 520 (768)
T 3rgz_A 441 LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILK 520 (768)
T ss_dssp CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEE
T ss_pred CCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCcccccCCcccCCCCCCceeecccceeeeccchhhcc----------------------------------------
Q 003199 292 LSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYR---------------------------------------- 331 (840)
Q Consensus 292 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~---------------------------------------- 331 (840)
|++|++++.+|..++.+++|+.|+|++|++++.+|..++.
T Consensus 521 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (768)
T 3rgz_A 521 LSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIR 600 (768)
T ss_dssp CCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCC
T ss_pred CCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999877765533
Q ss_pred ------------------------------cCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhccccc
Q 003199 332 ------------------------------AISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLK 381 (840)
Q Consensus 332 ------------------------------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 381 (840)
+++|+.|||++|+++|.+|..++++++|+.|+|++|+++|.+|..|+.++
T Consensus 601 ~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~ 680 (768)
T 3rgz_A 601 SEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLR 680 (768)
T ss_dssp GGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT
T ss_pred chhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCC
Confidence 46789999999999999999999999999999999999999999999999
Q ss_pred CCCEEECcCccccccCCchhhcc-CCCeEEccCCCCcCcCCccc--ccCCCcccccCCCCCccccc
Q 003199 382 SLNVLDLSNNLLTGYIPESLCEL-LPNSINFSNNRLSGPIPLSL--IKEGLVESFSGNPGLCVSVS 444 (840)
Q Consensus 382 ~L~~L~l~~N~l~~~~p~~~~~~-~~~~l~l~~N~l~~~~p~~~--~~~~~~~~~~~n~~~c~~~~ 444 (840)
+|+.|||++|+|+|.+|..+..+ .++.||+++|+++|.+|..- ..+ ...++.|||++||.+.
T Consensus 681 ~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~-~~~~~~gN~~Lcg~~l 745 (768)
T 3rgz_A 681 GLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETF-PPAKFLNNPGLCGYPL 745 (768)
T ss_dssp TCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGS-CGGGGCSCTEEESTTS
T ss_pred CCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccC-CHHHhcCCchhcCCCC
Confidence 99999999999999999999998 57999999999999999752 222 4567999999999764
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=3.7e-52 Score=499.19 Aligned_cols=428 Identities=32% Similarity=0.475 Sum_probs=359.7
Q ss_pred ccccccccCCCCCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcccc
Q 003199 2 SFMYLTGTLPDFSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALH 81 (840)
Q Consensus 2 ~~~~~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~ 81 (840)
+.|.++|.+|. ..+++|++|+|++|.+++.+|. ++++++|++|+|++| .+....+..|..+++|++|+|++|.+.
T Consensus 186 s~n~l~~~~~~-~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n---~l~~~~~~~l~~l~~L~~L~Ls~n~l~ 260 (768)
T 3rgz_A 186 SGNKISGDVDV-SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGN---KLSGDFSRAISTCTELKLLNISSNQFV 260 (768)
T ss_dssp CSSEEESCCBC-TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSS---CCCSCHHHHTTTCSSCCEEECCSSCCE
T ss_pred CCCcccccCCc-ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCC---cCCCcccHHHhcCCCCCEEECCCCccc
Confidence 34555655543 7888899999999998877776 888999999999999 566555677889999999999999998
Q ss_pred ccCCccccCCCCCcEEEccCCcccccCchhhhcC-CCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCcc
Q 003199 82 GQIPASIGNVTSLTDLELTGNFITGHIPPEIGLL-KNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPES 160 (840)
Q Consensus 82 ~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l-~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~ 160 (840)
+..|.. .+++|++|+|++|++++.+|..+..+ ++|++|+|++|+ +.+.+|..|+.+++|++|+|++|.+++.+|..
T Consensus 261 ~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~-l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~ 337 (768)
T 3rgz_A 261 GPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNH-FYGAVPPFFGSCSLLESLALSSNNFSGELPMD 337 (768)
T ss_dssp ESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSE-EEECCCGGGGGCTTCCEEECCSSEEEEECCHH
T ss_pred CccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCc-CCCccchHHhcCCCccEEECCCCcccCcCCHH
Confidence 777765 78899999999999998889888775 999999999997 67789999999999999999999999777765
Q ss_pred -ccCCCCCcEEEeeccccccccchhhhcCC-C--------------------------CCEEEccCCcCcccCCcCCCCC
Q 003199 161 -ILRLPKLRVLQLYNNSLSGEISSVIANST-T--------------------------LTMLSLYDNSLTGEVPQDLGQW 212 (840)
Q Consensus 161 -~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~--------------------------L~~L~L~~N~l~~~~~~~l~~l 212 (840)
+..+++|++|++++|++++..|..+..++ + |++|+|++|++++.+|..+..+
T Consensus 338 ~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l 417 (768)
T 3rgz_A 338 TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC 417 (768)
T ss_dssp HHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGC
T ss_pred HHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcC
Confidence 89999999999999999877777666554 4 5555555555555666677777
Q ss_pred CCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEec
Q 003199 213 SPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDL 292 (840)
Q Consensus 213 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 292 (840)
++|++|+|++|++++..|..+..+++|+.|++++|.+.+.+|..+..+++|++|++++|++++.+|..+..+++|+.|+|
T Consensus 418 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 497 (768)
T 3rgz_A 418 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISL 497 (768)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEEC
T ss_pred CCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEc
Confidence 78888888888888888888888888888888888888888888888888888888888888888888888899999999
Q ss_pred cCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcc-------------------
Q 003199 293 SYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGI------------------- 353 (840)
Q Consensus 293 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~------------------- 353 (840)
++|++++.+|..++.+++|+.|+|++|++++.+|..+..+++|+.|+|++|+++|.+|..+
T Consensus 498 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~ 577 (768)
T 3rgz_A 498 SNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVY 577 (768)
T ss_dssp CSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEE
T ss_pred cCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccc
Confidence 9999988888889999999999999999998999999999999999999998887776543
Q ss_pred ---------------------------------------------------cCccccchhcccCCccCCCcchhcccccC
Q 003199 354 ---------------------------------------------------GNLKKLNLLMLQSNKLNSSIPNSLSSLKS 382 (840)
Q Consensus 354 ---------------------------------------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 382 (840)
+.+++|+.|+|++|+++|.+|..++.+++
T Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~ 657 (768)
T 3rgz_A 578 IKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPY 657 (768)
T ss_dssp EECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTT
T ss_pred cccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhcccc
Confidence 33567888999999999999999999999
Q ss_pred CCEEECcCccccccCCchhhcc-CCCeEEccCCCCcCcCCcccccCC--CcccccCCC
Q 003199 383 LNVLDLSNNLLTGYIPESLCEL-LPNSINFSNNRLSGPIPLSLIKEG--LVESFSGNP 437 (840)
Q Consensus 383 L~~L~l~~N~l~~~~p~~~~~~-~~~~l~l~~N~l~~~~p~~~~~~~--~~~~~~~n~ 437 (840)
|+.|||++|+++|.+|..+..+ .++.||+++|+++|.+|..+.... ....+++|+
T Consensus 658 L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~ 715 (768)
T 3rgz_A 658 LFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNN 715 (768)
T ss_dssp CCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSE
T ss_pred CCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCc
Confidence 9999999999999999999988 578999999999999998766543 345666665
No 3
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=6.4e-53 Score=441.56 Aligned_cols=257 Identities=27% Similarity=0.384 Sum_probs=207.0
Q ss_pred HhcCccCeeeccCCcEEEEEEeC------CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN------SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYC 599 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 599 (840)
++|...+.||+|+||+||+|.+. ++..||||++.... ....+.|.+|++++++++|||||+++|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~----------~~~~~~f~~E~~il~~l~HpnIV~l~g 82 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS----------DNARKDFHREAELLTNLQHEHIVKFYG 82 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC----------HHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC----------hHHHHHHHHHHHHHHhCCCCCCccEEE
Confidence 45777889999999999999764 47889999985321 234578999999999999999999999
Q ss_pred EEecCccceEEEeecCCCChHHHhhcC------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCE
Q 003199 600 YFSSLYCNLLVYEYMPNGNLWDALHKG------------LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNI 667 (840)
Q Consensus 600 ~~~~~~~~~lV~e~~~~gsL~~~l~~~------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Ni 667 (840)
+|.+.+..++|||||++|+|.++++.. ...++|.++..|+.|||+||+|||+ ++||||||||+||
T Consensus 83 ~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NI 159 (299)
T 4asz_A 83 VCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNC 159 (299)
T ss_dssp EECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred EEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhE
Confidence 999999999999999999999999753 2469999999999999999999999 9999999999999
Q ss_pred EEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCC
Q 003199 668 LLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDN 746 (840)
Q Consensus 668 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~ 746 (840)
|+++++.+||+|||+|+...... .........||+.|||||++.+..++.++|||||||++|||+| |+.||.+.. .
T Consensus 160 Ll~~~~~~Ki~DFGla~~~~~~~-~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~--~ 236 (299)
T 4asz_A 160 LVGENLLVKIGDFGMSRDVYSTD-YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--N 236 (299)
T ss_dssp EECGGGCEEECCCSCHHHHTGGG-CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--H
T ss_pred EECCCCcEEECCcccceecCCCC-ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--H
Confidence 99999999999999998764421 1122234569999999999999999999999999999999999 999997531 1
Q ss_pred cchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 747 KNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
..... .+......+.....+.++.+++.+||+.||++|||++||.+.|+++.
T Consensus 237 ~~~~~-------------~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 237 NEVIE-------------CITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HHHHH-------------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHH-------------HHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 11111 11111111112223456778888999999999999999999998753
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.2e-52 Score=441.37 Aligned_cols=257 Identities=22% Similarity=0.329 Sum_probs=207.9
Q ss_pred hcCccCeeeccCCcEEEEEEeC------CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 527 AMTEKNKVGQGGSGTVYKIDLN------SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 527 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
.+...+.||+|+||+||+|.+. +++.||||++..... ....+.|.+|+.++++++|||||+++|+
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~---------~~~~~~f~~E~~il~~l~HpNIV~l~g~ 97 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE---------GPLREEFRHEAMLRARLQHPNVVCLLGV 97 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC---------C-CHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC---------hHHHHHHHHHHHHHHhCCCCCCCCcceE
Confidence 3456678999999999999763 468899999854321 1234679999999999999999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCC---------------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGL---------------VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKST 665 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~ 665 (840)
|.+....++|||||++|+|.+++.... ..++|.++..|+.|||+||+|||+ ++||||||||+
T Consensus 98 ~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~ 174 (308)
T 4gt4_A 98 VTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATR 174 (308)
T ss_dssp ECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGG
T ss_pred EEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCcccc
Confidence 999999999999999999999996431 358999999999999999999999 99999999999
Q ss_pred CEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCC
Q 003199 666 NILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFG 744 (840)
Q Consensus 666 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~ 744 (840)
|||+++++.+||+|||+|+...... .........||+.|||||++.++.++.++|||||||++|||+| |+.||.+..
T Consensus 175 NILl~~~~~~Ki~DFGlar~~~~~~-~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~- 252 (308)
T 4gt4_A 175 NVLVYDKLNVKISDLGLFREVYAAD-YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS- 252 (308)
T ss_dssp GEEECGGGCEEECCSCCBCGGGGGG-CBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC-
T ss_pred ceEECCCCCEEECCcccceeccCCC-ceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC-
Confidence 9999999999999999998765421 2223345679999999999999999999999999999999999 899997531
Q ss_pred CCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 745 DNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
...... .+......+...+.+..+.+++.+||+.||++||||+||+++|+.+.
T Consensus 253 -~~~~~~-------------~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 253 -NQDVVE-------------MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp -HHHHHH-------------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -HHHHHH-------------HHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 111111 11111112222334456778899999999999999999999998753
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-52 Score=436.74 Aligned_cols=262 Identities=28% Similarity=0.400 Sum_probs=203.2
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
+++...++||+|+||+||+|.+++ .||||+++.... ..+..+.|.+|++++++++|||||+++|++.+ +
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~--------~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~ 104 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDP--------TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-D 104 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSC--------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-S
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCC--------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-C
Confidence 345677899999999999998763 699999853321 13345789999999999999999999999865 5
Q ss_pred cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhh
Q 003199 606 CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKV 685 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 685 (840)
..++|||||++|+|.++++.....++|.++..|+.|||.||+|||+ ++||||||||+|||+++++.+||+|||+|+.
T Consensus 105 ~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~ 181 (307)
T 3omv_A 105 NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC
T ss_pred eEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCcee
Confidence 6899999999999999998776689999999999999999999999 9999999999999999999999999999987
Q ss_pred hhccCCCCcceecccccccccCcccccc---CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 686 LQARGGKDSTTTVIAGTYGYLAPEYAYS---SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 686 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
.... ..........||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+... ...... ....
T Consensus 182 ~~~~-~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~--~~~~~~---~~~~--- 252 (307)
T 3omv_A 182 KSRW-SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN--RDQIIF---MVGR--- 252 (307)
T ss_dssp -------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--HHHHHH---HHHT---
T ss_pred cccC-CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh--HHHHHH---HHhc---
Confidence 6432 12233455689999999999854 4689999999999999999999999975321 111111 0000
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
....+.+.....+....+.+++.+||+.||++||||.||+++|+.+..
T Consensus 253 --~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 253 --GYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp --TCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred --CCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 011112222223344567788889999999999999999999987643
No 6
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.9e-52 Score=442.78 Aligned_cols=257 Identities=26% Similarity=0.345 Sum_probs=201.0
Q ss_pred HhcCccCeeeccCCcEEEEEEeC------CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN------SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYC 599 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 599 (840)
++|...++||+|+||+||+|.++ +++.||||++.... ....+.|.+|++++++++|||||+++|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~----------~~~~~~f~~E~~il~~l~HpnIV~l~g 110 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS----------ESARQDFQREAELLTMLQHQHIVRFFG 110 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS----------HHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC----------HHHHHHHHHHHHHHHhCCCCCCCcEEE
Confidence 35666789999999999999764 47899999984321 234578999999999999999999999
Q ss_pred EEecCccceEEEeecCCCChHHHhhcCC--------------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 003199 600 YFSSLYCNLLVYEYMPNGNLWDALHKGL--------------VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKST 665 (840)
Q Consensus 600 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~ 665 (840)
+|.+....++|||||++|+|.++++... ..++|.++..|+.|||+||+|||+ ++||||||||+
T Consensus 111 ~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~ 187 (329)
T 4aoj_A 111 VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATR 187 (329)
T ss_dssp EECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGG
T ss_pred EEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHh
Confidence 9999999999999999999999997642 358999999999999999999999 99999999999
Q ss_pred CEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCC
Q 003199 666 NILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFG 744 (840)
Q Consensus 666 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~ 744 (840)
|||+++++.+||+|||+|+..... ..........||+.|||||++.+..++.++|||||||++|||+| |+.||.+..
T Consensus 188 NILl~~~~~~Ki~DFGla~~~~~~-~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~- 265 (329)
T 4aoj_A 188 NCLVGQGLVVKIGDFGMSRDIYST-DYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS- 265 (329)
T ss_dssp GEEEETTTEEEECCCC-----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC-
T ss_pred hEEECCCCcEEEcccccceeccCC-CcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC-
Confidence 999999999999999999876432 12223345679999999999999999999999999999999999 999997531
Q ss_pred CCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 745 DNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
.......+ ... .....+. ....++.+++.+||+.||++||||+||+++|+.+.
T Consensus 266 -~~~~~~~i---~~g-------~~~~~p~---~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~ 318 (329)
T 4aoj_A 266 -NTEAIDCI---TQG-------RELERPR---ACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA 318 (329)
T ss_dssp -HHHHHHHH---HHT-------CCCCCCT---TCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred -HHHHHHHH---HcC-------CCCCCcc---cccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence 11111110 000 0111122 23456778888999999999999999999998764
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.2e-51 Score=437.41 Aligned_cols=252 Identities=24% Similarity=0.360 Sum_probs=200.4
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||+||+|.. .+|+.||||++...... ....+.+.+|++++++++|||||++++++.+.
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~--------~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~ 95 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMS--------SKEREESRREVAVLANMKHPNIVQYRESFEEN 95 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSC--------HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCC--------HHHHHHHHHHHHHHHHCCCCCCCcEEEEEEEC
Confidence 5788999999999999999965 57999999999544321 23356789999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
+..|+|||||++|+|.+++.... ..+++.+++.|+.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|
T Consensus 96 ~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla 172 (350)
T 4b9d_A 96 GSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIA 172 (350)
T ss_dssp TEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEE
T ss_pred CEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccc
Confidence 99999999999999999997543 457899999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
+.+.. ........+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.. ......
T Consensus 173 ~~~~~---~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~--------- 235 (350)
T 4b9d_A 173 RVLNS---TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVL--------- 235 (350)
T ss_dssp SCCCH---HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHH---------
T ss_pred eeecC---CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHH---------
Confidence 87632 1122345679999999999999999999999999999999999999997531 111111
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.+......+.......++.+++.+||+.||++|||++|++++
T Consensus 236 -~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 236 -KIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp -HHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 111111111112233456778889999999999999999875
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.2e-49 Score=466.82 Aligned_cols=436 Identities=21% Similarity=0.205 Sum_probs=281.7
Q ss_pred CccccccccCCC-CCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcc
Q 003199 1 MSFMYLTGTLPD-FSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCA 79 (840)
Q Consensus 1 ~~~~~~~~~~~~-~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~ 79 (840)
++.|.+++..|. |+++++|++|+|++|.|++..|.+|.++++|++|+|++| .+..+++..|..+++|++|+|++|.
T Consensus 40 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n---~l~~~~~~~~~~l~~L~~L~L~~n~ 116 (606)
T 3t6q_A 40 FSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTAN---PLIFMAETALSGPKALKHLFFIQTG 116 (606)
T ss_dssp CTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTC---CCSEECTTTTSSCTTCCEEECTTSC
T ss_pred ccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCC---cccccChhhhcccccccEeeccccC
Confidence 356777777664 888888888888888888777888888888888888888 5666677778888888888888888
Q ss_pred ccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCC--eeeccCCcccccC
Q 003199 80 LHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELT--DLDMSVNHLSGKI 157 (840)
Q Consensus 80 l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~--~L~L~~n~l~~~~ 157 (840)
+++..|..++++++|++|+|++|++++..+..+..+++|++|++++|+ +.+..|..+..+++|+ +|++++|.+++..
T Consensus 117 i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~ 195 (606)
T 3t6q_A 117 ISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNA-IHYLSKEDMSSLQQATNLSLNLNGNDIAGIE 195 (606)
T ss_dssp CSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSC-CCEECHHHHHTTTTCCSEEEECTTCCCCEEC
T ss_pred cccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCc-ccccChhhhhhhcccceeEEecCCCccCccC
Confidence 877667778888888888888888875443444557788888887776 4444455566666666 6666666666544
Q ss_pred CccccCC---------------------------------------------------CCCcEEEeeccccccccchhhh
Q 003199 158 PESILRL---------------------------------------------------PKLRVLQLYNNSLSGEISSVIA 186 (840)
Q Consensus 158 ~~~~~~l---------------------------------------------------~~L~~L~L~~N~l~~~~~~~~~ 186 (840)
|..|... .+|+.|++++|.+++..+..|.
T Consensus 196 ~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~ 275 (606)
T 3t6q_A 196 PGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFH 275 (606)
T ss_dssp TTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTT
T ss_pred hhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhc
Confidence 4333210 0344444444444444444455
Q ss_pred cCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCcccc-------------------------CCCCchh
Q 003199 187 NSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVC-------------------------SRGKLQY 241 (840)
Q Consensus 187 ~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~-------------------------~l~~L~~ 241 (840)
.+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..+. .+++|++
T Consensus 276 ~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~ 354 (606)
T 3t6q_A 276 CFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRE 354 (606)
T ss_dssp TCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCE
T ss_pred cccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCE
Confidence 5555555555555555 3444555555555555555555544444444 4455555
Q ss_pred hhcccccccccC--CcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCc-ccCCCCCCceeeccc
Q 003199 242 FLVLQNMFSGVL--PDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIAN-TVGNARNLSELFMQR 318 (840)
Q Consensus 242 L~l~~n~~~~~~--~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~ 318 (840)
|++++|.+.+.. +..+..+++|++|++++|++.+..|..+..+++|+.|++++|++++..+. .+..+++|+.|++++
T Consensus 355 L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~ 434 (606)
T 3t6q_A 355 LDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSH 434 (606)
T ss_dssp EECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTT
T ss_pred EECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCC
Confidence 555555554443 44555556666666666666555555666666666666666666554433 356666666666666
Q ss_pred ceeeeccchhhcccCcccEEEcCCCccCCC---CCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccc
Q 003199 319 NQISGFIPSEIYRAISLVKIDLSDNLLSGP---IPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTG 395 (840)
Q Consensus 319 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 395 (840)
|.+++..|..+..+++|+.|+|++|++++. .+..+..+++|+.|+|++|++++..|..|..+++|++|+|++|++++
T Consensus 435 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 514 (606)
T 3t6q_A 435 SLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTS 514 (606)
T ss_dssp CCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCG
T ss_pred CccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCc
Confidence 666666666666666777777777766642 22456667777777777777776667777777777777777777777
Q ss_pred cCCchhhccCCCeEEccCCCCcCcCCccccc--CCCcccccCCCCCcc
Q 003199 396 YIPESLCELLPNSINFSNNRLSGPIPLSLIK--EGLVESFSGNPGLCV 441 (840)
Q Consensus 396 ~~p~~~~~~~~~~l~l~~N~l~~~~p~~~~~--~~~~~~~~~n~~~c~ 441 (840)
.+|..+..+....|++++|++++..|..+.. ......+.+|||.|.
T Consensus 515 ~~~~~l~~l~~L~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 515 SSIEALSHLKGIYLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp GGGGGGTTCCSCEEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred CChhHhCcccccEEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 7777777663227777888877766654322 224567888888883
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-49 Score=480.69 Aligned_cols=433 Identities=22% Similarity=0.262 Sum_probs=252.2
Q ss_pred ccccccccCCC-CCCCCCCCEEecCCCcCcccC-CccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcc
Q 003199 2 SFMYLTGTLPD-FSPMQNLRRLDLSNNLFTGQF-PLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCA 79 (840)
Q Consensus 2 ~~~~~~~~~~~-~~~l~~L~~L~Ls~n~i~~~~-p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~ 79 (840)
++|.+++..|. |.++++|++|+|++|.+.+.+ |.+|.++++|++|+|++| .+..+.+..|.++++|++|+|++|.
T Consensus 32 s~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N---~l~~~~p~~~~~l~~L~~L~Ls~n~ 108 (844)
T 3j0a_A 32 SFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSS---KIYFLHPDAFQGLFHLFELRLYFCG 108 (844)
T ss_dssp ESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTC---CCCEECTTSSCSCSSCCCEECTTCC
T ss_pred CCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCC---cCcccCHhHccCCcccCEeeCcCCC
Confidence 34555555443 556666666666665333232 555566666666666666 4445555555566666666666666
Q ss_pred ccccCCcc--ccCCCCCcEEEccCCcccccCc-hhhhcCCCCCeeecccCccccccCCcccCCC--CCCCeeeccCCccc
Q 003199 80 LHGQIPAS--IGNVTSLTDLELTGNFITGHIP-PEIGLLKNLRQLELYYNQQLAGTIPEELGNL--TELTDLDMSVNHLS 154 (840)
Q Consensus 80 l~~~~~~~--~~~l~~L~~L~L~~n~i~~~~p-~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l--~~L~~L~L~~n~l~ 154 (840)
+.+..|.. |+++++|++|+|++|.+++..+ ..|+++++|++|+|++|. +.+..+..+..+ ++|+.|+|++|.+.
T Consensus 109 l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~-i~~~~~~~l~~l~~~~L~~L~L~~n~l~ 187 (844)
T 3j0a_A 109 LSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQ-IFLVCEHELEPLQGKTLSFFSLAANSLY 187 (844)
T ss_dssp CSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSC-CCCCCSGGGHHHHHCSSCCCEECCSBSC
T ss_pred CCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCc-CCeeCHHHcccccCCccceEECCCCccc
Confidence 55444333 5556666666666666554433 355556666666665554 333333333333 34444444444444
Q ss_pred ccCCccccCCCC------CcEEEeeccccccccchhhhc--------------------------------------CCC
Q 003199 155 GKIPESILRLPK------LRVLQLYNNSLSGEISSVIAN--------------------------------------STT 190 (840)
Q Consensus 155 ~~~~~~~~~l~~------L~~L~L~~N~l~~~~~~~~~~--------------------------------------l~~ 190 (840)
+..|..+..+++ |+.|++++|.+++..+..+.. .++
T Consensus 188 ~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~ 267 (844)
T 3j0a_A 188 SRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSS 267 (844)
T ss_dssp CCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSC
T ss_pred cccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCC
Confidence 333333333222 444444444433222221111 134
Q ss_pred CCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeC
Q 003199 191 LTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSN 270 (840)
Q Consensus 191 L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 270 (840)
|++|+|++|.+.+..+..|..+++|+.|+|++|++++..+..|..+++|++|++++|.+.+..+..|..+++|+.|++++
T Consensus 268 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 347 (844)
T 3j0a_A 268 VRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQK 347 (844)
T ss_dssp CCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCS
T ss_pred ccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCC
Confidence 55555555555544455555555555555555555555555555555555555555555555555555555555555555
Q ss_pred ceeeccCCccccCCCcccEEeccCCcccccCC----------------------------------------cccCCCCC
Q 003199 271 NHLEGSIPEGILSLPHVSIIDLSYNSFSGPIA----------------------------------------NTVGNARN 310 (840)
Q Consensus 271 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~----------------------------------------~~~~~l~~ 310 (840)
|++.+..+..|..+++|+.|+|++|.+++... ..+..+++
T Consensus 348 N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~ 427 (844)
T 3j0a_A 348 NHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPH 427 (844)
T ss_dssp CCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTT
T ss_pred CCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCc
Confidence 55554444445555555555555555443110 01235566
Q ss_pred Cceeecccceeeeccch-hhcccCcccEEEcCCCccC-----CCCCCcccCccccchhcccCCccCCCcchhcccccCCC
Q 003199 311 LSELFMQRNQISGFIPS-EIYRAISLVKIDLSDNLLS-----GPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLN 384 (840)
Q Consensus 311 L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 384 (840)
|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|++.+|..|..+++|+
T Consensus 428 L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 507 (844)
T 3j0a_A 428 LQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALR 507 (844)
T ss_dssp CCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCS
T ss_pred cceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhh
Confidence 66666666666644332 2344567777777777775 33446688899999999999999999999999999999
Q ss_pred EEECcCccccccCCchhhccCCCeEEccCCCCcCcCCcccccCCCcccccCCCCCc
Q 003199 385 VLDLSNNLLTGYIPESLCELLPNSINFSNNRLSGPIPLSLIKEGLVESFSGNPGLC 440 (840)
Q Consensus 385 ~L~l~~N~l~~~~p~~~~~~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~n~~~c 440 (840)
.|+|++|+|++..|..+. ..++.|++++|+++|..|..+... ....+.+|||.|
T Consensus 508 ~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~~~~~L-~~l~l~~Np~~C 561 (844)
T 3j0a_A 508 GLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPNPDVFVSL-SVLDITHNKFIC 561 (844)
T ss_dssp EEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSCCCSSC-CEEEEEEECCCC
T ss_pred eeECCCCCCCccChhhhh-ccccEEECCCCcCCCCChhHhCCc-CEEEecCCCccc
Confidence 999999999976666555 567899999999999999776533 567899999999
No 10
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.5e-51 Score=424.92 Aligned_cols=269 Identities=23% Similarity=0.289 Sum_probs=215.2
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||+||+|.. .+|+.||||++..... ......+.+.+|++++++++|||||++++++.+.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-------~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 104 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-------IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD 104 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-------HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-------CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence 4688999999999999999955 5799999999854321 1122356789999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
+..|+||||+++|+|.+++.+.. .+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+
T Consensus 105 ~~~yivmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~ 180 (311)
T 4aw0_A 105 EKLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAK 180 (311)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCce
Confidence 99999999999999999998764 69999999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
.+... .........+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.. ...........
T Consensus 181 ~~~~~-~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~~i~~~----- 249 (311)
T 4aw0_A 181 VLSPE-SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----EGLIFAKIIKL----- 249 (311)
T ss_dssp ECCTT-TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHT-----
T ss_pred ecCCC-CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcC-----
Confidence 76432 22233456789999999999999999999999999999999999999997531 11111111110
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCCCCCCCCC
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRFESCKFPN 822 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~~~~~~ 822 (840)
+..++..+ ..++.+++.+|+++||++|||++|+..+-+-.....|...+|..
T Consensus 250 ---~~~~p~~~---s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~ 301 (311)
T 4aw0_A 250 ---EYDFPEKF---FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN 301 (311)
T ss_dssp ---CCCCCTTC---CHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTT
T ss_pred ---CCCCCccc---CHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHH
Confidence 01122222 33566788899999999999999976554444455555555544
No 11
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=9.8e-51 Score=429.61 Aligned_cols=250 Identities=25% Similarity=0.376 Sum_probs=204.6
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
+.|+..++||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+++++.++|||||++++++.+.
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----------~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~ 143 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----------RRELLFNEVVIMRDYQHENVVEMYNSYLVG 143 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS----------SGGGGHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh----------HHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence 4578888999999999999965 47999999998543211 123477899999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
+..|+|||||++|+|.+++... .+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+
T Consensus 144 ~~~~ivmEy~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 144 DELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp TEEEEEECCCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCce
Confidence 9999999999999999999875 58999999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
.+.. ........+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.. ........ .
T Consensus 219 ~~~~---~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~----~~~~~~~i--------~ 283 (346)
T 4fih_A 219 QVSK---EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP----PLKAMKMI--------R 283 (346)
T ss_dssp ECCS---SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHHHHH--------H
T ss_pred ecCC---CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC----HHHHHHHH--------H
Confidence 7643 2223456789999999999999999999999999999999999999997531 11111100 0
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
......+ ........++.+++.+||+.||++|||+.|+++|
T Consensus 284 ~~~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 284 DNLPPRL-KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp HSSCCCC-SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCCCCCC-CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0001111 1122234566778889999999999999999986
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.7e-50 Score=425.11 Aligned_cols=253 Identities=23% Similarity=0.280 Sum_probs=201.6
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
+.|...++||+|+||+||+|.. .+|+.||||++..... ..+|+.++++++|||||++++++.+.
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------------~~~E~~il~~l~HpnIV~l~~~~~~~ 122 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------------RVEELVACAGLSSPRIVPLYGAVREG 122 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------------CTHHHHTTTTCCCTTBCCEEEEEEET
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------------HHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence 4577788999999999999965 5799999999854321 13699999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCC-CCeeecccch
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNY-QPKVADFGIA 683 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~Dfg~a 683 (840)
...|+|||||++|+|.+++.+.. .+++..+..++.||+.||+|||+ ++||||||||+|||++.++ .+||+|||+|
T Consensus 123 ~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla 198 (336)
T 4g3f_A 123 PWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHA 198 (336)
T ss_dssp TEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTC
T ss_pred CEEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCC
Confidence 99999999999999999998764 69999999999999999999999 9999999999999999987 6999999999
Q ss_pred hhhhccCCCC--cceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 684 KVLQARGGKD--STTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 684 ~~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
+.+...+... ......+||+.|||||++.+..|+.++|||||||++|||+||+.||.+..... ....+ .....
T Consensus 199 ~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~i---~~~~~ 273 (336)
T 4g3f_A 199 LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--LCLKI---ASEPP 273 (336)
T ss_dssp EEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--CHHHH---HHSCC
T ss_pred eEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHH---HcCCC
Confidence 8775432111 12234679999999999999999999999999999999999999997643221 11110 00000
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
. ...+++.+ ...+.+++.+||++||++|||+.|++++|...
T Consensus 274 ~-----~~~~~~~~---s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 274 P-----IREIPPSC---APLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp G-----GGGSCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C-----chhcCccC---CHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 0 01122222 34566778899999999999999999988653
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.8e-50 Score=426.42 Aligned_cols=272 Identities=25% Similarity=0.278 Sum_probs=200.0
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|...+.||+|+||+||+|.+. |+.||||++.... .....+..|+..+.+++|||||+++++|.+.+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~-----------~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~ 70 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-----------ERSWFREAEIYQTVMLRHENILGFIAADNKDN 70 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG-----------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc-----------hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC
Confidence 45677789999999999999885 8999999984321 11223445777778899999999999997654
Q ss_pred ----cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhc-----CCCCeEecCCCCCCEEEcCCCCCe
Q 003199 606 ----CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHG-----LLSPIIHRDIKSTNILLDVNYQPK 676 (840)
Q Consensus 606 ----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~ivH~Dlk~~Nill~~~~~~k 676 (840)
..+||||||++|+|.++++.. .++|+.+..++.|++.||+|||+. +.++||||||||+|||++.++.+|
T Consensus 71 ~~~~~~~lV~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~K 148 (303)
T 3hmm_A 71 GTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp SSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CCceEEEEEecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEE
Confidence 568999999999999999875 589999999999999999999973 123999999999999999999999
Q ss_pred eecccchhhhhccCCC-CcceecccccccccCccccccC------CCCccccchhHHHHHHHHHhCCCCCCCCCCCCcch
Q 003199 677 VADFGIAKVLQARGGK-DSTTTVIAGTYGYLAPEYAYSS------KATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNI 749 (840)
Q Consensus 677 l~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 749 (840)
|+|||+|+........ ........||+.|||||++.+. .++.++|||||||++|||+||+.||..........
T Consensus 149 i~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~ 228 (303)
T 3hmm_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp ECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTT
T ss_pred EEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccc
Confidence 9999999876432111 1223346799999999998764 36789999999999999999988875432211111
Q ss_pred hhhhhhhhccccchhhhcc----cccCCCc--HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 750 IYWVSIKVDTKEGIMEVLD----KKLSGSF--RDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
..+.............+.. +.++..+ .+....+.+++.+||+.||++||||.||++.|+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 229 YDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp TTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 1100000000000011112 2222222 245667889999999999999999999999998764
No 14
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4.9e-50 Score=416.23 Aligned_cols=247 Identities=25% Similarity=0.345 Sum_probs=194.6
Q ss_pred CccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec----
Q 003199 529 TEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS---- 603 (840)
Q Consensus 529 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---- 603 (840)
...++||+|+||+||+|.. .++..||||++...... ....+.|.+|++++++++|||||+++++|.+
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~--------~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~ 100 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--------KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKG 100 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--------HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETT
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCC--------HHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCC
Confidence 3456799999999999965 47899999998543311 2335679999999999999999999999865
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCCEEEcC-CCCCeeecc
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSP--IIHRDIKSTNILLDV-NYQPKVADF 680 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~~-~~~~kl~Df 680 (840)
....++|||||++|+|.+++.+.. .+++..+..|+.||+.||+|||+ ++ ||||||||+|||++. ++.+||+||
T Consensus 101 ~~~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DF 176 (290)
T 3fpq_A 101 KKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDL 176 (290)
T ss_dssp EEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCT
T ss_pred CcEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeC
Confidence 355799999999999999998764 69999999999999999999998 66 999999999999984 789999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
|+|+... .......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+... ............
T Consensus 177 Gla~~~~-----~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~----~~~~~~~i~~~~ 246 (290)
T 3fpq_A 177 GLATLKR-----ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSGV 246 (290)
T ss_dssp TGGGGCC-----TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTTTC
T ss_pred cCCEeCC-----CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc----HHHHHHHHHcCC
Confidence 9997532 223445689999999998865 699999999999999999999999964311 111111100000
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
........ ...++.+++.+||+.||++|||++|+++|
T Consensus 247 ------~~~~~~~~---~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 247 ------KPASFDKV---AIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ------CCGGGGGC---CCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ------CCCCCCcc---CCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00111111 12356778889999999999999999976
No 15
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.2e-48 Score=453.74 Aligned_cols=416 Identities=21% Similarity=0.190 Sum_probs=372.2
Q ss_pred CccccccccCCC-CCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcc
Q 003199 1 MSFMYLTGTLPD-FSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCA 79 (840)
Q Consensus 1 ~~~~~~~~~~~~-~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~ 79 (840)
++.|.+++..|+ |+++++|++|+|++|.+++..|..|.++++|++|+|++| .+..+++..|..+++|++|++++|.
T Consensus 64 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n---~i~~l~~~~~~~l~~L~~L~L~~n~ 140 (606)
T 3t6q_A 64 LTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQT---GISSIDFIPLHNQKTLESLYLGSNH 140 (606)
T ss_dssp CTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTS---CCSCGGGSCCTTCTTCCEEECCSSC
T ss_pred CCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecccc---CcccCCcchhccCCcccEEECCCCc
Confidence 456778888776 999999999999999999888999999999999999999 6777777779999999999999999
Q ss_pred ccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCC--eeecccCcccccc-------------------------
Q 003199 80 LHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLR--QLELYYNQQLAGT------------------------- 132 (840)
Q Consensus 80 l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~--~L~L~~n~~~~~~------------------------- 132 (840)
+.+..+..+..+++|++|+|++|.+++..|..|..+++|+ .|++++|++ .+.
T Consensus 141 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l-~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 219 (606)
T 3t6q_A 141 ISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI-AGIEPGAFDSAVFQSLNFGGTQNLLVIF 219 (606)
T ss_dssp CCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC-CEECTTTTTTCEEEEEECTTCSCHHHHH
T ss_pred ccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc-CccChhHhhhccccccccCCchhHHHHh
Confidence 9875545555699999999999999988888899999888 778877752 221
Q ss_pred --------------------------------------------------CCcccCCCCCCCeeeccCCcccccCCcccc
Q 003199 133 --------------------------------------------------IPEELGNLTELTDLDMSVNHLSGKIPESIL 162 (840)
Q Consensus 133 --------------------------------------------------~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~ 162 (840)
.+..|..+++|++|++++|+++ .+|..+.
T Consensus 220 ~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~~l~ 298 (606)
T 3t6q_A 220 KGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPSGLV 298 (606)
T ss_dssp HHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCSSCC
T ss_pred hhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCChhhc
Confidence 2233777899999999999999 6788899
Q ss_pred CCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCc-CCCCCCCcceeccccccccccC--CccccCCCCc
Q 003199 163 RLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQ-DLGQWSPLVVLDLSENKLSGPL--PAKVCSRGKL 239 (840)
Q Consensus 163 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~l~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L 239 (840)
.+++|++|++++|.+.+..+..+..+++|++|++++|.+.+.++. .+..+++|++|++++|++++.. +..+..+++|
T Consensus 299 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L 378 (606)
T 3t6q_A 299 GLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHL 378 (606)
T ss_dssp SCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTC
T ss_pred ccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCC
Confidence 999999999999999988888999999999999999999855554 5899999999999999999876 7889999999
Q ss_pred hhhhcccccccccCCcccccccCCceEEeeCceeeccCCc-cccCCCcccEEeccCCcccccCCcccCCCCCCceeeccc
Q 003199 240 QYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPE-GILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQR 318 (840)
Q Consensus 240 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 318 (840)
++|++++|.+.+..+..|..+++|++|++++|++++..+. .+..+++|+.|++++|.+++..+..++.+++|++|+|++
T Consensus 379 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 458 (606)
T 3t6q_A 379 QSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQG 458 (606)
T ss_dssp CEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCC
Confidence 9999999999999999999999999999999999977665 488999999999999999999999999999999999999
Q ss_pred ceeeec---cchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccc
Q 003199 319 NQISGF---IPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTG 395 (840)
Q Consensus 319 N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 395 (840)
|++++. .+..+..+++|+.|+|++|++++..|..|+.+++|+.|+|++|++++..|..|..+++| .|+|++|++++
T Consensus 459 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~ 537 (606)
T 3t6q_A 459 NHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISI 537 (606)
T ss_dssp CBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCC
T ss_pred CCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccc
Confidence 999863 33678999999999999999999889999999999999999999999999999999999 99999999998
Q ss_pred cCCchhhcc-CCCeEEccCCCCcCcCCc
Q 003199 396 YIPESLCEL-LPNSINFSNNRLSGPIPL 422 (840)
Q Consensus 396 ~~p~~~~~~-~~~~l~l~~N~l~~~~p~ 422 (840)
.+|..+..+ .++.+++++|++.|.++.
T Consensus 538 ~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 565 (606)
T 3t6q_A 538 ILPSLLPILSQQRTINLRQNPLDCTCSN 565 (606)
T ss_dssp CCGGGHHHHHTSSEEECTTCCEECSGGG
T ss_pred cCHhhcccCCCCCEEeCCCCCccccCCc
Confidence 888888777 679999999999999884
No 16
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=7.6e-50 Score=410.95 Aligned_cols=250 Identities=24% Similarity=0.349 Sum_probs=190.5
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
..+|+..+.||+|+||+||+|.. .+|+.||||++...... .....+.+.+|++++++++|||||++++++.+
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~-------~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~ 84 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLA-------KSDMQGRIEREISYLRLLRHPHIIKLYDVIKS 84 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-------------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcC-------CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence 46799999999999999999965 57999999998543321 12335678999999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
.+..++||||+ +|+|.+++.+.. .+++.++..++.||+.||+|||+ ++|+||||||+|||+++++.+||+|||+|
T Consensus 85 ~~~~~ivmEy~-~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla 159 (275)
T 3hyh_A 85 KDEIIMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLS 159 (275)
T ss_dssp SSEEEEEEECC-CEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC
T ss_pred CCEEEEEEeCC-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCC
Confidence 99999999999 789999998765 69999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKA-TTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
+.... ........||+.|||||++.+..+ +.++||||+||++|||+||+.||.+.. .....+......
T Consensus 160 ~~~~~----~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~~~i~~~~-- 228 (275)
T 3hyh_A 160 NIMTD----GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGV-- 228 (275)
T ss_dssp -------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTC--
T ss_pred eecCC----CCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCC--
Confidence 87643 223345789999999999988876 579999999999999999999997531 111111111100
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
..++... ..++.+++.+|++.||++|||++|++++
T Consensus 229 ------~~~p~~~---s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 229 ------YTLPKFL---SPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp ------CCCCTTS---CHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred ------CCCCCCC---CHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 1112222 3456678889999999999999999986
No 17
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.8e-49 Score=430.40 Aligned_cols=250 Identities=25% Similarity=0.377 Sum_probs=204.5
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
+.|+..+.||+|+||+||+|.. .+|+.||||++...... ..+.+.+|+.+|+.++|||||++++++.+.
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~----------~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~ 220 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ----------RRELLFNEVVIMRDYQHENVVEMYNSYLVG 220 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS----------SGGGHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh----------HHHHHHHHHHHHHhCCCCCCCceEEEEEEC
Confidence 4588889999999999999965 57999999998543211 124578999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
+..|+|||||++|+|.+++... .+++.++..|+.||+.||+|||+ ++||||||||+|||++.+|.+||+|||+|+
T Consensus 221 ~~~~iVmEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 221 DELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp TEEEEEEECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccce
Confidence 9999999999999999999765 58999999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
.+.. ........+||+.|||||++.+..|+.++|||||||++|||++|+.||.+.. .. ...... .
T Consensus 296 ~~~~---~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~----~~-~~~~~i-------~ 360 (423)
T 4fie_A 296 QVSK---EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP----PL-KAMKMI-------R 360 (423)
T ss_dssp ECCS---SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HH-HHHHHH-------H
T ss_pred ECCC---CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC----HH-HHHHHH-------H
Confidence 7643 2223456789999999999999999999999999999999999999997531 11 111100 0
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
......+ ........++.+++.+||+.||++|||+.|+++|
T Consensus 361 ~~~~~~~-~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 361 DNLPPRL-KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp HSCCCCC-SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred cCCCCCC-cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0011111 1111233456678889999999999999999986
No 18
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.8e-49 Score=424.63 Aligned_cols=258 Identities=26% Similarity=0.342 Sum_probs=205.8
Q ss_pred HhcCccCeeeccCCcEEEEEEeCC------CcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCC-CCcceee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNS------GEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRH-KNIVKLY 598 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~ 598 (840)
++|+..+.||+|+||+||+|.+.. ++.||||++..... ....+.|.+|++++++++| ||||+++
T Consensus 64 ~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~---------~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT---------HSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC---------HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred HHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC---------hHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 578889999999999999997542 36899999854321 2335679999999999975 8999999
Q ss_pred eEEecC-ccceEEEeecCCCChHHHhhcC---------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCC
Q 003199 599 CYFSSL-YCNLLVYEYMPNGNLWDALHKG---------------LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDI 662 (840)
Q Consensus 599 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dl 662 (840)
|+|.+. ...++|||||++|+|.++++.. ...++|.++..++.|||+||+|||+ ++||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCcc
Confidence 999664 5689999999999999999753 1348999999999999999999999 99999999
Q ss_pred CCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCC
Q 003199 663 KSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVED 741 (840)
Q Consensus 663 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~ 741 (840)
||+|||+++++.+||+|||+|+.+... ..........||+.|||||++.+..|+.++|||||||++|||+| |+.||.+
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~-~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTC-TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CccceeeCCCCCEEECcchhhhhcccC-CCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 999999999999999999999876432 12233445679999999999999999999999999999999998 9999975
Q ss_pred CCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 742 DFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
.... ...... +. .-.....+. ....++.+++.+||+.||++|||++||+++|+++
T Consensus 291 ~~~~-~~~~~~----i~------~g~~~~~p~---~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 291 VKID-EEFCRR----LK------EGTRMRAPD---YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp CCCS-HHHHHH----HH------HTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCHH-HHHHHH----HH------cCCCCCCCc---cCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 3211 111110 00 000111122 2234677888899999999999999999999865
No 19
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.7e-47 Score=454.77 Aligned_cols=437 Identities=21% Similarity=0.208 Sum_probs=259.0
Q ss_pred ccccccccCCC-CCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccc
Q 003199 2 SFMYLTGTLPD-FSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCAL 80 (840)
Q Consensus 2 ~~~~~~~~~~~-~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l 80 (840)
+.|.+++..+. |+++++|++|+|++|.+++..|..|.++++|++|+|++| .+..++...|..+++|++|+|++|.+
T Consensus 33 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n---~l~~l~~~~~~~l~~L~~L~L~~n~l 109 (680)
T 1ziw_A 33 THNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN---ELSQLSDKTFAFCTNLTELHLMSNSI 109 (680)
T ss_dssp CSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS---CCCCCCTTTTTTCTTCSEEECCSSCC
T ss_pred CCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC---ccCccChhhhccCCCCCEEECCCCcc
Confidence 34555555543 666666666666666666666666666666666666666 45555655566666666666666666
Q ss_pred cccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCcc-------------------------ccccCCc
Q 003199 81 HGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQ-------------------------LAGTIPE 135 (840)
Q Consensus 81 ~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~-------------------------~~~~~p~ 135 (840)
.+..|..|+++++|++|+|++|.+++..|..|..+++|++|++++|++ +.+..|.
T Consensus 110 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 189 (680)
T 1ziw_A 110 QKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPG 189 (680)
T ss_dssp CCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTT
T ss_pred CccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChh
Confidence 655555566666666666666666655555555555555555555531 1111111
Q ss_pred ---------------------------------------------------ccCCC--CCCCeeeccCCcccccCCcccc
Q 003199 136 ---------------------------------------------------ELGNL--TELTDLDMSVNHLSGKIPESIL 162 (840)
Q Consensus 136 ---------------------------------------------------~l~~l--~~L~~L~L~~n~l~~~~~~~~~ 162 (840)
.|.++ ++|++|+|++|.+++..|..|.
T Consensus 190 ~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~ 269 (680)
T 1ziw_A 190 CFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFA 269 (680)
T ss_dssp GGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTT
T ss_pred hhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCccccc
Confidence 11122 1255555555555555555555
Q ss_pred CCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcc-----cCC----cCCCCCCCcceeccccccccccCCccc
Q 003199 163 RLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTG-----EVP----QDLGQWSPLVVLDLSENKLSGPLPAKV 233 (840)
Q Consensus 163 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-----~~~----~~l~~l~~L~~L~L~~N~l~~~~~~~~ 233 (840)
.+++|++|++++|++.+..+..|.++++|++|++++|...+ .+| ..|..+++|++|++++|++++..+..|
T Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 349 (680)
T 1ziw_A 270 WLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMF 349 (680)
T ss_dssp TCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTT
T ss_pred CcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHh
Confidence 55555555555555554444333332222222222211110 000 023334444444444455544444444
Q ss_pred cCCCCchhhh----------------------------cccccccccCCcccccccCCceEEeeCceeeccCC-ccccCC
Q 003199 234 CSRGKLQYFL----------------------------VLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIP-EGILSL 284 (840)
Q Consensus 234 ~~l~~L~~L~----------------------------l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l 284 (840)
..+++|++|+ +++|.+.+..|.+|..+++|+.|++++|.+.+.+| ..|..+
T Consensus 350 ~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l 429 (680)
T 1ziw_A 350 TGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGL 429 (680)
T ss_dssp TTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTC
T ss_pred ccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCc
Confidence 4333333333 23334444445555555555555555555554333 344445
Q ss_pred CcccEEeccCCc------------------------cc--ccCCcccCCCCCCceeecccceeeeccchhhcccCcccEE
Q 003199 285 PHVSIIDLSYNS------------------------FS--GPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKI 338 (840)
Q Consensus 285 ~~L~~L~L~~N~------------------------l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 338 (840)
++|+.|++++|+ ++ +..|..|+.+++|+.|+|++|++++..+..+..+++|+.|
T Consensus 430 ~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L 509 (680)
T 1ziw_A 430 ENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEIL 509 (680)
T ss_dssp TTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEE
Confidence 555555555554 43 3456677778888888888888887777778888888888
Q ss_pred EcCCCccCCCCC--------CcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhcc-CCCeE
Q 003199 339 DLSDNLLSGPIP--------SGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCEL-LPNSI 409 (840)
Q Consensus 339 ~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~~~l 409 (840)
+|++|++++..+ ..++++++|+.|+|++|+++...+..|..+++|+.|||++|+|++..+..+..+ .++.|
T Consensus 510 ~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 589 (680)
T 1ziw_A 510 DLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSL 589 (680)
T ss_dssp ECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred eCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEE
Confidence 888888875422 236788889999999999986656678999999999999999996555555555 67899
Q ss_pred EccCCCCcCcCCcccc---cCCCcccccCCCCCcc
Q 003199 410 NFSNNRLSGPIPLSLI---KEGLVESFSGNPGLCV 441 (840)
Q Consensus 410 ~l~~N~l~~~~p~~~~---~~~~~~~~~~n~~~c~ 441 (840)
++++|++++..|..+. .......+.+|||.|.
T Consensus 590 ~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 590 NLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp ECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred ECCCCcCCccChhHhcccccccCEEEccCCCcccC
Confidence 9999999987776433 2335678899999995
No 20
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9.7e-48 Score=450.67 Aligned_cols=428 Identities=22% Similarity=0.210 Sum_probs=311.9
Q ss_pred ccccccccCC-CCCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccc
Q 003199 2 SFMYLTGTLP-DFSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCAL 80 (840)
Q Consensus 2 ~~~~~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l 80 (840)
+.|.+++..+ .|.++++|++|+|++|.|++..|.+|.++++|++|+|++| .+..+++..|.++++|++|+|++|.+
T Consensus 40 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n---~l~~~~p~~~~~l~~L~~L~L~~n~l 116 (606)
T 3vq2_A 40 SFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN---PIQSFSPGSFSGLTSLENLVAVETKL 116 (606)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC---CCCCCCTTSSTTCTTCCEEECTTSCC
T ss_pred CCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC---cccccChhhcCCcccCCEEEccCCcc
Confidence 4456666666 4677777777777777777666667777777777777777 55666666677777777777777777
Q ss_pred cccCCccccCCCCCcEEEccCCcccc-cCchhhhcCCCCCeeecccCccccccCCcccCCCCCCC----eeeccCCcccc
Q 003199 81 HGQIPASIGNVTSLTDLELTGNFITG-HIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELT----DLDMSVNHLSG 155 (840)
Q Consensus 81 ~~~~~~~~~~l~~L~~L~L~~n~i~~-~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~----~L~L~~n~l~~ 155 (840)
.+..+..|+++++|++|+|++|.+++ .+|..|.++++|++|+|++|+ +.+..|..+..+++|+ +|++++|.+++
T Consensus 117 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~ 195 (606)
T 3vq2_A 117 ASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNY-IQTITVNDLQFLRENPQVNLSLDMSLNPIDF 195 (606)
T ss_dssp CCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSC-CCEECTTTTHHHHHCTTCCCEEECTTCCCCE
T ss_pred ccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCc-ceecChhhhhhhhccccccceeeccCCCcce
Confidence 66665667777777777777777764 346677777777777777775 3444444454444333 56666666654
Q ss_pred cCCccccCCCCCcEEEeecccccc--------------------------------------------------------
Q 003199 156 KIPESILRLPKLRVLQLYNNSLSG-------------------------------------------------------- 179 (840)
Q Consensus 156 ~~~~~~~~l~~L~~L~L~~N~l~~-------------------------------------------------------- 179 (840)
..+..+... +|+.|++++|.+.+
T Consensus 196 ~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~ 274 (606)
T 3vq2_A 196 IQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDF 274 (606)
T ss_dssp ECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTC
T ss_pred eCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccc
Confidence 433333322 55555555554420
Q ss_pred --ccch---------------------hhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCC
Q 003199 180 --EISS---------------------VIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSR 236 (840)
Q Consensus 180 --~~~~---------------------~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 236 (840)
..+. .+..+++|++|++++|++. .+| .+ .+++|+.|++++|+..+.. .+..+
T Consensus 275 ~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~-~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l 349 (606)
T 3vq2_A 275 SDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLK-QFP-TL-DLPFLKSLTLTMNKGSISF--KKVAL 349 (606)
T ss_dssp CGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCS-SCC-CC-CCSSCCEEEEESCSSCEEC--CCCCC
T ss_pred cccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCc-ccc-cC-CCCccceeeccCCcCccch--hhccC
Confidence 1111 2333445555555555552 334 23 5555555555555433222 45677
Q ss_pred CCchhhhccccccccc--CCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCC-cccCCCCCCce
Q 003199 237 GKLQYFLVLQNMFSGV--LPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIA-NTVGNARNLSE 313 (840)
Q Consensus 237 ~~L~~L~l~~n~~~~~--~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~ 313 (840)
++|++|++++|.+.+. .+..+..+++|++|++++|.++ .+|..+..+++|+.|++++|++.+..+ ..+..+++|+.
T Consensus 350 ~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 350 PSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp TTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 8888888888888776 3788889999999999999998 467889999999999999999998877 68899999999
Q ss_pred eecccceeeeccchhhcccCcccEEEcCCCccCC-CCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCcc
Q 003199 314 LFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSG-PIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNL 392 (840)
Q Consensus 314 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 392 (840)
|++++|++++..|..+..+++|+.|++++|++++ .+|..++.+++|+.|+|++|++++..|..|..+++|++|+|++|+
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 508 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNN 508 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCc
Confidence 9999999999899999999999999999999997 478899999999999999999998889999999999999999999
Q ss_pred ccccCCchhhcc-CCCeEEccCCCCcCcCCcccccC---CCcccccCCCCCcc
Q 003199 393 LTGYIPESLCEL-LPNSINFSNNRLSGPIPLSLIKE---GLVESFSGNPGLCV 441 (840)
Q Consensus 393 l~~~~p~~~~~~-~~~~l~l~~N~l~~~~p~~~~~~---~~~~~~~~n~~~c~ 441 (840)
+++.+|..+..+ .++.|++++|+++ .+|..+... .....+.+|||.|.
T Consensus 509 l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 509 LLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp CSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred CCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccC
Confidence 999889998887 5789999999998 566554443 34568899999984
No 21
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.3e-50 Score=416.38 Aligned_cols=250 Identities=25% Similarity=0.326 Sum_probs=196.0
Q ss_pred HhcCccCeeeccCCcEEEEEEe----CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL----NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
++|+..+.||+|+||+||+|.. .+++.||||++........ ....+.+|++++++++|||||++++++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~--------~~~~~~~E~~il~~l~HpnIv~l~~~~ 95 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR--------DRVRTKMERDILVEVNHPFIVKLHYAF 95 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE--------ECC------CCCCCCCCTTEECEEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH--------HHHHHHHHHHHHHHCCCCCCCeEEEEE
Confidence 4688999999999999999965 2578999999865432211 123477899999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
.+.+..|+|||||++|+|.+++.+.. .+++.++..++.||+.||+|||+ ++||||||||+|||+++++.+||+|||
T Consensus 96 ~~~~~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFG 171 (304)
T 3ubd_A 96 QTEGKLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFG 171 (304)
T ss_dssp EETTEEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSE
T ss_pred EECCEEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccc
Confidence 99999999999999999999998765 69999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
+|+..... .......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+.. . ..........
T Consensus 172 la~~~~~~---~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~---~--~~~~~~i~~~-- 241 (304)
T 3ubd_A 172 LSKESIDH---EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD---R--KETMTMILKA-- 241 (304)
T ss_dssp EEEC--------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS---H--HHHHHHHHHC--
T ss_pred cceeccCC---CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC---H--HHHHHHHHcC--
Confidence 99865432 223345789999999999999999999999999999999999999997531 1 1111111110
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPT-----MNEVVQL 806 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~evl~~ 806 (840)
....+.. ...++.+++.+||+.||++||| ++|+++|
T Consensus 242 ------~~~~p~~---~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 242 ------KLGMPQF---LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp ------CCCCCTT---SCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred ------CCCCCCc---CCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcC
Confidence 0111222 2345667888999999999998 4677765
No 22
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.6e-48 Score=406.42 Aligned_cols=253 Identities=21% Similarity=0.348 Sum_probs=191.2
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||+||+|.. .+|+.||||++.... .....+.+.+|++++++++|||||++++++.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---------~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~ 74 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---------RELAREKVMREVKALAKLEHPGIVRYFNAWLE 74 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---------SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe
Confidence 45789999999999999999965 479999999985432 12335678999999999999999999999865
Q ss_pred Cc------------cceEEEeecCCCChHHHhhcCC--CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE
Q 003199 604 LY------------CNLLVYEYMPNGNLWDALHKGL--VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL 669 (840)
Q Consensus 604 ~~------------~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 669 (840)
.+ ..|+|||||++|+|.+++.... ...++..++.++.||+.||+|||+ ++||||||||+|||+
T Consensus 75 ~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl 151 (299)
T 4g31_A 75 KNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFF 151 (299)
T ss_dssp EC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEE
T ss_pred cCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEE
Confidence 43 3689999999999999998653 234567789999999999999999 999999999999999
Q ss_pred cCCCCCeeecccchhhhhccCCCC---------cceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 003199 670 DVNYQPKVADFGIAKVLQARGGKD---------STTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVE 740 (840)
Q Consensus 670 ~~~~~~kl~Dfg~a~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 740 (840)
+.++.+||+|||+|+.+....... ......+||+.|||||++.+..|+.++|||||||++|||++ ||.
T Consensus 152 ~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~ 228 (299)
T 4g31_A 152 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFS 228 (299)
T ss_dssp CTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCS
T ss_pred CCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCC
Confidence 999999999999998875422111 12234579999999999999999999999999999999996 775
Q ss_pred CCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 741 DDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.. .... .....+.....++.+.+......+++.+||+.||++|||+.|++++
T Consensus 229 ~~----~~~~----------~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 229 TQ----MERV----------RTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp SH----HHHH----------HHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred Cc----cHHH----------HHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 31 0000 0011112222333334444566788999999999999999999875
No 23
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=3.7e-46 Score=437.21 Aligned_cols=410 Identities=20% Similarity=0.191 Sum_probs=358.7
Q ss_pred CccccccccCCC-CCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcc
Q 003199 1 MSFMYLTGTLPD-FSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCA 79 (840)
Q Consensus 1 ~~~~~~~~~~~~-~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~ 79 (840)
++.|.+++..|+ |.++++|++|+|++|.|++..|..|.++++|++|+|++| .+..+++..|..+++|++|++++|.
T Consensus 63 Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n---~l~~~~~~~~~~l~~L~~L~L~~n~ 139 (606)
T 3vq2_A 63 LSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVET---KLASLESFPIGQLITLKKLNVAHNF 139 (606)
T ss_dssp CTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTS---CCCCSSSSCCTTCTTCCEEECCSSC
T ss_pred CCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCC---ccccccccccCCCCCCCEEeCCCCc
Confidence 456788888785 899999999999999999888999999999999999999 7778887789999999999999999
Q ss_pred ccc-cCCccccCCCCCcEEEccCCcccccCchhhhcCCCCC----eeecccCccccccCCcc------------------
Q 003199 80 LHG-QIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLR----QLELYYNQQLAGTIPEE------------------ 136 (840)
Q Consensus 80 l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~----~L~L~~n~~~~~~~p~~------------------ 136 (840)
+.+ .+|..|+++++|++|+|++|++++..|..|..+++|+ .|++++|+ +.+..+..
T Consensus 140 l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~-l~~~~~~~~~~~~L~~L~L~~n~~~~ 218 (606)
T 3vq2_A 140 IHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP-IDFIQDQAFQGIKLHELTLRGNFNSS 218 (606)
T ss_dssp CCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCC-CCEECTTTTTTCEEEEEEEESCCSCH
T ss_pred ccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCC-cceeCcccccCceeeeeeccCCccch
Confidence 986 5699999999999999999999988888777766554 56666665 22111111
Q ss_pred --------------------------------------------------------------cCCCCCCCeeeccCCccc
Q 003199 137 --------------------------------------------------------------LGNLTELTDLDMSVNHLS 154 (840)
Q Consensus 137 --------------------------------------------------------------l~~l~~L~~L~L~~n~l~ 154 (840)
+..+++|+.|++++|.+.
T Consensus 219 ~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 298 (606)
T 3vq2_A 219 NIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIK 298 (606)
T ss_dssp HHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCC
T ss_pred hHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccch
Confidence 334566666777777766
Q ss_pred ccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceecccccccccc--CCcc
Q 003199 155 GKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGP--LPAK 232 (840)
Q Consensus 155 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~--~~~~ 232 (840)
.+| .+..+++|++|++++|.+. .+| .+ .+++|++|++++|+..+.. .+..+++|++|++++|++++. .+..
T Consensus 299 -~l~-~l~~~~~L~~L~l~~n~l~-~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~ 371 (606)
T 3vq2_A 299 -YLE-DVPKHFKWQSLSIIRCQLK-QFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYS 371 (606)
T ss_dssp -CCC-CCCTTCCCSEEEEESCCCS-SCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHH
T ss_pred -hhh-hccccccCCEEEcccccCc-ccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhh
Confidence 344 7888899999999999995 555 45 9999999999999665433 678999999999999999977 4888
Q ss_pred ccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCC-ccccCCCcccEEeccCCcccccCCcccCCCCCC
Q 003199 233 VCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIP-EGILSLPHVSIIDLSYNSFSGPIANTVGNARNL 311 (840)
Q Consensus 233 ~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 311 (840)
+..+++|++|++++|.+.+ +|..+..+++|+.|++++|++.+..| ..+..+++|+.|++++|++++..+..++.+++|
T Consensus 372 ~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 450 (606)
T 3vq2_A 372 DLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSL 450 (606)
T ss_dssp HHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC
T ss_pred hccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCC
Confidence 9999999999999999886 55889999999999999999998777 688999999999999999999999999999999
Q ss_pred ceeecccceeee-ccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcC
Q 003199 312 SELFMQRNQISG-FIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSN 390 (840)
Q Consensus 312 ~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 390 (840)
++|+|++|++++ ..|..+..+++|+.|+|++|++++..|..++++++|+.|+|++|++++.+|..|..+++|++|||++
T Consensus 451 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~ 530 (606)
T 3vq2_A 451 NTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSF 530 (606)
T ss_dssp CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTT
T ss_pred CEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCC
Confidence 999999999997 4788999999999999999999999999999999999999999999998899999999999999999
Q ss_pred ccccccCCchhhccC--CCeEEccCCCCcCcCCcc
Q 003199 391 NLLTGYIPESLCELL--PNSINFSNNRLSGPIPLS 423 (840)
Q Consensus 391 N~l~~~~p~~~~~~~--~~~l~l~~N~l~~~~p~~ 423 (840)
|+|+ .+|..+..+. ++.+++++|++.|.++..
T Consensus 531 N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 531 NRIE-TSKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp SCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred CcCc-ccCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 9999 7888788773 789999999999998864
No 24
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-46 Score=451.35 Aligned_cols=413 Identities=24% Similarity=0.260 Sum_probs=301.8
Q ss_pred cccccccC-C-CCCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCC--CCcccccccccccEEEecCc
Q 003199 3 FMYLTGTL-P-DFSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWK--LPESSIFRLTKLRIMVLATC 78 (840)
Q Consensus 3 ~~~~~~~~-~-~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~--l~~~~~~~l~~L~~L~L~~n 78 (840)
.|+..+.+ | .|+++++|++|+|++|.|++..|..|.++++|++|+|++| .+.. .+...|..+++|++|+|++|
T Consensus 57 ~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n---~l~~~~~~~~~~~~L~~L~~L~Ls~N 133 (844)
T 3j0a_A 57 SQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFC---GLSDAVLKDGYFRNLKALTRLDLSKN 133 (844)
T ss_dssp TTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTC---CCSSCCSTTCCCSSCSSCCEEEEESC
T ss_pred CCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCC---CCCcccccCccccccCCCCEEECCCC
Confidence 34455565 4 3999999999999999999888999999999999999999 5554 23345899999999999999
Q ss_pred cccccCC-ccccCCCCCcEEEccCCcccccCchhhhcC--CCCCeeecccCccccccCCcccCCCCC------CCeeecc
Q 003199 79 ALHGQIP-ASIGNVTSLTDLELTGNFITGHIPPEIGLL--KNLRQLELYYNQQLAGTIPEELGNLTE------LTDLDMS 149 (840)
Q Consensus 79 ~l~~~~~-~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l--~~L~~L~L~~n~~~~~~~p~~l~~l~~------L~~L~L~ 149 (840)
.+.+..+ ..|+++++|++|+|++|.+++..+..|..+ ++|+.|+|+.|. +.+..|..+..+++ |++|+|+
T Consensus 134 ~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~-l~~~~~~~~~~~~~~~~~~~L~~L~Ls 212 (844)
T 3j0a_A 134 QIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANS-LYSRVSVDWGKCMNPFRNMVLEILDVS 212 (844)
T ss_dssp CCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSB-SCCCCCCCCCSSSCTTTTCCBSEEBCS
T ss_pred cccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCc-cccccccchhhcCCccccCceeEEecC
Confidence 9987755 579999999999999999998888888877 777777777775 44444444433333 5555555
Q ss_pred CCcccccCCccccC--------------------------------------CCCCcEEEeeccccccccchhhhcCCCC
Q 003199 150 VNHLSGKIPESILR--------------------------------------LPKLRVLQLYNNSLSGEISSVIANSTTL 191 (840)
Q Consensus 150 ~n~l~~~~~~~~~~--------------------------------------l~~L~~L~L~~N~l~~~~~~~~~~l~~L 191 (840)
+|.+++..+..+.. .++|+.|+|++|.+.+..+..|..+++|
T Consensus 213 ~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 292 (844)
T 3j0a_A 213 GNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDL 292 (844)
T ss_dssp SCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCC
T ss_pred CCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCC
Confidence 55544333222211 1345555555555555555555555555
Q ss_pred CEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCc
Q 003199 192 TMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNN 271 (840)
Q Consensus 192 ~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N 271 (840)
+.|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|++|++++|.+.+..+..|..+++|+.|++++|
T Consensus 293 ~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N 372 (844)
T 3j0a_A 293 KVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDN 372 (844)
T ss_dssp CEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETC
T ss_pred CEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCC
Confidence 55555555555555555555555555555555555555555555555555555555555555555555555555555555
Q ss_pred eeec------------------cCCc----------------------cccCCCcccEEeccCCcccccCCc-ccCCCCC
Q 003199 272 HLEG------------------SIPE----------------------GILSLPHVSIIDLSYNSFSGPIAN-TVGNARN 310 (840)
Q Consensus 272 ~l~~------------------~~~~----------------------~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~ 310 (840)
.+++ .+|. .+..+++|+.|+|++|++++..+. .+..+++
T Consensus 373 ~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 452 (844)
T 3j0a_A 373 ALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPS 452 (844)
T ss_dssp CSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTT
T ss_pred CCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCc
Confidence 5442 2221 133688999999999999876544 4667899
Q ss_pred Cceeecccceee-----eccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCE
Q 003199 311 LSELFMQRNQIS-----GFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNV 385 (840)
Q Consensus 311 L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 385 (840)
|+.|+|++|.++ +..+..+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++..+. ++|+.
T Consensus 453 L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~ 530 (844)
T 3j0a_A 453 LEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEI 530 (844)
T ss_dssp CCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCE
T ss_pred cccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccE
Confidence 999999999997 34456788899999999999999999999999999999999999999988777776 89999
Q ss_pred EECcCccccccCCchhhccCCCeEEccCCCCcCcCCcc
Q 003199 386 LDLSNNLLTGYIPESLCELLPNSINFSNNRLSGPIPLS 423 (840)
Q Consensus 386 L~l~~N~l~~~~p~~~~~~~~~~l~l~~N~l~~~~p~~ 423 (840)
|||++|+|++.+|..+. .+..+++++|++.|.++..
T Consensus 531 L~Ls~N~l~~~~~~~~~--~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 531 LDISRNQLLAPNPDVFV--SLSVLDITHNKFICECELS 566 (844)
T ss_dssp EEEEEECCCCCCSCCCS--SCCEEEEEEECCCCSSSCC
T ss_pred EECCCCcCCCCChhHhC--CcCEEEecCCCcccccccH
Confidence 99999999999998775 4689999999999998853
No 25
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=9.3e-47 Score=441.85 Aligned_cols=416 Identities=19% Similarity=0.252 Sum_probs=212.7
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCcc----C------CCCcc--------------------ccc-
Q 003199 17 QNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKL----W------KLPES--------------------SIF- 65 (840)
Q Consensus 17 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l----~------~l~~~--------------------~~~- 65 (840)
.+++.|+|++|+++|.+|.++++|++|+.|+|++|.+... . .+|.. .+.
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~ 160 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSD 160 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHH
Confidence 5799999999999999999999999999999999943000 0 00000 000
Q ss_pred ------------------ccccccEEEec--CccccccCCccccCCCCCcEEEccCCccccc-----------------C
Q 003199 66 ------------------RLTKLRIMVLA--TCALHGQIPASIGNVTSLTDLELTGNFITGH-----------------I 108 (840)
Q Consensus 66 ------------------~l~~L~~L~L~--~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~-----------------~ 108 (840)
....++.+.+. +|.+++ +|..|+++++|++|+|++|.+++. +
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~i 239 (636)
T 4eco_A 161 LIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYK 239 (636)
T ss_dssp HHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccC
Confidence 00001111111 344444 455555555555555555555542 4
Q ss_pred chhhh--cCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCc-ccc-cCCccccCC------CCCcEEEeeccccc
Q 003199 109 PPEIG--LLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNH-LSG-KIPESILRL------PKLRVLQLYNNSLS 178 (840)
Q Consensus 109 p~~~~--~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~-l~~-~~~~~~~~l------~~L~~L~L~~N~l~ 178 (840)
|..++ .+++|++|+|++|+ +.+.+|..|+++++|++|+|++|+ +++ .+|..+..+ ++|++|+|++|+++
T Consensus 240 p~~l~~~~l~~L~~L~L~~n~-l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 240 TEDLKWDNLKDLTDVEVYNCP-NLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TSCCCGGGCTTCCEEEEECCT-TCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred chhhhhcccCCCCEEEecCCc-CCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 55544 55555555555554 344455555555555555555554 544 444444443 55555555555555
Q ss_pred cccch--hhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCC-chhhhcccccccccCCc
Q 003199 179 GEISS--VIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGK-LQYFLVLQNMFSGVLPD 255 (840)
Q Consensus 179 ~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~l~~n~~~~~~~~ 255 (840)
.+|. .+.++++|++|+|++|++++.+| .|..+++|+.|+|++|+++ .+|..+..+++ |++|++++|.+. .+|.
T Consensus 319 -~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~ 394 (636)
T 4eco_A 319 -TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPN 394 (636)
T ss_dssp -SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCS
T ss_pred -ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccch
Confidence 3333 45555555555555555554444 4555555555555555555 44444555555 555555555555 3444
Q ss_pred cccccc--CCceEEeeCceeeccCCcccc-------CCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccc
Q 003199 256 SLARCK--NLLRFRVSNNHLEGSIPEGIL-------SLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIP 326 (840)
Q Consensus 256 ~~~~l~--~L~~L~l~~N~l~~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p 326 (840)
.+..++ +|+.|++++|++++..|..+. .+++|+.|+|++|+++...+..+..+++|++|+|++|+++ .+|
T Consensus 395 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~ 473 (636)
T 4eco_A 395 IFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIP 473 (636)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCC
T ss_pred hhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcC
Confidence 444332 455555555555555554444 4445555555555555433333444555555555555555 333
Q ss_pred hhhcccC--------cccEEEcCCCccCCCCCCccc--CccccchhcccCCccCCCcchhcccccCCCEEEC------cC
Q 003199 327 SEIYRAI--------SLVKIDLSDNLLSGPIPSGIG--NLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDL------SN 390 (840)
Q Consensus 327 ~~~~~l~--------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l------~~ 390 (840)
..+.... +|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| ++
T Consensus 474 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~ 551 (636)
T 4eco_A 474 KNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQG 551 (636)
T ss_dssp SSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTC
T ss_pred HHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCccccc
Confidence 3222211 4555555555555 3444443 55555555555555554 4455555555555555 33
Q ss_pred ccccccCCchhhcc-CCCeEEccCCCCcCcCCcccccCCCcccccCCCCCccc
Q 003199 391 NLLTGYIPESLCEL-LPNSINFSNNRLSGPIPLSLIKEGLVESFSGNPGLCVS 442 (840)
Q Consensus 391 N~l~~~~p~~~~~~-~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~n~~~c~~ 442 (840)
|++.+.+|..+..+ .++.|++++|++ +.+|..+........+.+||+.|..
T Consensus 552 N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 552 NRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISID 603 (636)
T ss_dssp CBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEEE
T ss_pred CcccccChHHHhcCCCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCcccc
Confidence 44555555555444 344555555555 4445443333334445555555543
No 26
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.5e-46 Score=432.14 Aligned_cols=426 Identities=21% Similarity=0.240 Sum_probs=255.1
Q ss_pred cccccccCC-CCCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcccc
Q 003199 3 FMYLTGTLP-DFSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALH 81 (840)
Q Consensus 3 ~~~~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~ 81 (840)
.|.+++..+ .|.++++|++|+|++|.|++..|..|.++++|++|+|++| .+..+++..|.++++|++|++++|.++
T Consensus 37 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n---~l~~~~~~~~~~l~~L~~L~L~~n~l~ 113 (570)
T 2z63_A 37 FNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN---PIQSLALGAFSGLSSLQKLVAVETNLA 113 (570)
T ss_dssp SCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC---CCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred CCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCC---cCCccCHhhhcCccccccccccccccc
Confidence 344444444 3556666666666666666555555666666666666666 445555555666666666666666665
Q ss_pred ccCCccccCCCCCcEEEccCCcccc-cCchhhhcCCCCCeeecccCccccccCCcccCCCCCC----CeeeccCCccccc
Q 003199 82 GQIPASIGNVTSLTDLELTGNFITG-HIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTEL----TDLDMSVNHLSGK 156 (840)
Q Consensus 82 ~~~~~~~~~l~~L~~L~L~~n~i~~-~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L----~~L~L~~n~l~~~ 156 (840)
+..+..++++++|++|+|++|.+++ .+|..|.++++|++|++++|+ +.+..+..+..+++| ++|++++|.+++.
T Consensus 114 ~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~ 192 (570)
T 2z63_A 114 SLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK-IQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFI 192 (570)
T ss_dssp CSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSC-CCEECGGGGHHHHTCTTCCCEEECTTCCCCEE
T ss_pred cCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCc-cceecHHHccchhccchhhhhcccCCCCceec
Confidence 4444455666666666666666654 245556666666666666654 333334445555555 5556666655554
Q ss_pred CCccccCCCCCcEEEeecc----------------------------------------------------------ccc
Q 003199 157 IPESILRLPKLRVLQLYNN----------------------------------------------------------SLS 178 (840)
Q Consensus 157 ~~~~~~~l~~L~~L~L~~N----------------------------------------------------------~l~ 178 (840)
.+..|..+ +|+.|++++| .+.
T Consensus 193 ~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~ 271 (570)
T 2z63_A 193 QPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYL 271 (570)
T ss_dssp CTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEE
T ss_pred CHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhh
Confidence 44444433 4555555554 222
Q ss_pred cccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccc
Q 003199 179 GEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLA 258 (840)
Q Consensus 179 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 258 (840)
+..+..|..+++|++|++++|.++ .+|..+..+ +|+.|++++|.+. .+|. ..+++|+.|++.+|.+.+..+. .
T Consensus 272 ~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~ 344 (570)
T 2z63_A 272 DDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--V 344 (570)
T ss_dssp SCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--C
T ss_pred hhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--c
Confidence 233445566677777777777777 466666666 7777777777776 3333 3455566666666665544443 5
Q ss_pred cccCCceEEeeCceeeccC--CccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccc-hhhcccCcc
Q 003199 259 RCKNLLRFRVSNNHLEGSI--PEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIP-SEIYRAISL 335 (840)
Q Consensus 259 ~l~~L~~L~l~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L 335 (840)
.+++|++|++++|++++.. |..+..+++|+.|++++|++.+..+. +..+++|++|++++|.+.+..| ..+..+++|
T Consensus 345 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 423 (570)
T 2z63_A 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423 (570)
T ss_dssp BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTC
T ss_pred cCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCC
Confidence 5666777777777666433 45566666777777777766655444 6666677777777777665544 355666677
Q ss_pred cEEEcCCCccCCCCCCcccCccccchhcccCCccC-CCcchhcccccCCCEEECcCccccccCCchhhcc-CCCeEEccC
Q 003199 336 VKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLN-SSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCEL-LPNSINFSN 413 (840)
Q Consensus 336 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~~~l~l~~ 413 (840)
+.|++++|++++..|..+.++++|+.|+|++|+++ +.+|..+..+++|++|+|++|++++..|..+..+ .++.|++++
T Consensus 424 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 77777777766666666666677777777777665 4566666667777777777777766666666655 456677777
Q ss_pred CCCcCcCCcccccC--CCcccccCCCCCcc
Q 003199 414 NRLSGPIPLSLIKE--GLVESFSGNPGLCV 441 (840)
Q Consensus 414 N~l~~~~p~~~~~~--~~~~~~~~n~~~c~ 441 (840)
|++++..|..+... .....+.+||+.|.
T Consensus 504 n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 504 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp SCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CcCCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 77666655433322 13445666666663
No 27
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.9e-45 Score=434.41 Aligned_cols=416 Identities=20% Similarity=0.215 Sum_probs=277.5
Q ss_pred cccccccCCC-CCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcccc
Q 003199 3 FMYLTGTLPD-FSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALH 81 (840)
Q Consensus 3 ~~~~~~~~~~-~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~ 81 (840)
.|.+++..+. |+++++|++|+|++|.+++..|..|.++++|++|+|++| .+..+++..|..+++|++|++++|.++
T Consensus 82 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n---~l~~~~~~~~~~l~~L~~L~L~~n~l~ 158 (680)
T 1ziw_A 82 HNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHN---GLSSTKLGTQVQLENLQELLLSNNKIQ 158 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSS---CCSCCCCCSSSCCTTCCEEECCSSCCC
T ss_pred CCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCC---cccccCchhhcccccCCEEEccCCccc
Confidence 3444444432 666666666666666666555555666666666666666 344444444444555555555544444
Q ss_pred c--------------------------cCCccccCC---------------------------CCCcEEEccCCcccccC
Q 003199 82 G--------------------------QIPASIGNV---------------------------TSLTDLELTGNFITGHI 108 (840)
Q Consensus 82 ~--------------------------~~~~~~~~l---------------------------~~L~~L~L~~n~i~~~~ 108 (840)
+ ..|..+..+ ++|+.|++++|.+++..
T Consensus 159 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~ 238 (680)
T 1ziw_A 159 ALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTS 238 (680)
T ss_dssp CBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEEC
T ss_pred ccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccC
Confidence 3 333322221 22233333333333333
Q ss_pred chhhhcCCC--CCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccc-------------------------
Q 003199 109 PPEIGLLKN--LRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESI------------------------- 161 (840)
Q Consensus 109 p~~~~~l~~--L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~------------------------- 161 (840)
|..|..++. |+.|+|++|+ +.+..|..|..+++|++|+|++|++++..|..|
T Consensus 239 ~~~~~~l~~~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~l 317 (680)
T 1ziw_A 239 NTTFLGLKWTNLTMLDLSYNN-LNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASL 317 (680)
T ss_dssp TTTTGGGGGSCCCEEECTTSC-CCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------C
T ss_pred hhHhhccCcCCCCEEECCCCC-cCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccc
Confidence 334444433 6666666665 344445556666666666666666665544433
Q ss_pred --------cCCCCCcEEEeeccccccccchhhhcCCCCCEEEcc----------------------------CCcCcccC
Q 003199 162 --------LRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLY----------------------------DNSLTGEV 205 (840)
Q Consensus 162 --------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~----------------------------~N~l~~~~ 205 (840)
..+++|++|++++|.+++..+..|.++++|++|+++ +|+++++.
T Consensus 318 p~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~ 397 (680)
T 1ziw_A 318 PKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIE 397 (680)
T ss_dssp CEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEEC
T ss_pred cccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEC
Confidence 344555555555555555555555555555444444 34444445
Q ss_pred CcCCCCCCCcceeccccccccccCC-ccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceee--ccCCcccc
Q 003199 206 PQDLGQWSPLVVLDLSENKLSGPLP-AKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLE--GSIPEGIL 282 (840)
Q Consensus 206 ~~~l~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~--~~~~~~~~ 282 (840)
+..|..+++|+.|+|++|++++.++ ..|..+++|++|++++|.+.+..+..|..+++|+.|++++|.+. +..|..|.
T Consensus 398 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~ 477 (680)
T 1ziw_A 398 SDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQ 477 (680)
T ss_dssp TTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTT
T ss_pred hhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccc
Confidence 5556666666666666666655443 45666666666666666666666666666777777777777665 46788889
Q ss_pred CCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccch--------hhcccCcccEEEcCCCccCCCCCCccc
Q 003199 283 SLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPS--------EIYRAISLVKIDLSDNLLSGPIPSGIG 354 (840)
Q Consensus 283 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~--------~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 354 (840)
.+++|+.|++++|++++..+..|..+++|++|+|++|++++..+. .+..+++|+.|+|++|+++...+..|.
T Consensus 478 ~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 557 (680)
T 1ziw_A 478 PLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFK 557 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred cCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcc
Confidence 999999999999999999999999999999999999999865332 378889999999999999965556799
Q ss_pred CccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhh-cc-CCCeEEccCCCCcCcCCc
Q 003199 355 NLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLC-EL-LPNSINFSNNRLSGPIPL 422 (840)
Q Consensus 355 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~~-~~~~l~l~~N~l~~~~p~ 422 (840)
++++|+.|+|++|+|++.++..|..+++|+.|+|++|+|++..|..+. .+ .++.+++++|++.|.++.
T Consensus 558 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 558 DLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 999999999999999988888899999999999999999987777665 33 578999999999999884
No 28
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.1e-45 Score=432.65 Aligned_cols=407 Identities=20% Similarity=0.275 Sum_probs=322.2
Q ss_pred CccccccccCCC-CCCCCCCCEEecCCCcCc------c---------------------------cCCcccc--------
Q 003199 1 MSFMYLTGTLPD-FSPMQNLRRLDLSNNLFT------G---------------------------QFPLSVF-------- 38 (840)
Q Consensus 1 ~~~~~~~~~~~~-~~~l~~L~~L~Ls~n~i~------~---------------------------~~p~~~~-------- 38 (840)
++.+.+.|.+|. |+.|++|++|+|++|.++ + .+|..+.
T Consensus 88 L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~ 167 (636)
T 4eco_A 88 LEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCIN 167 (636)
T ss_dssp CTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHH
T ss_pred ecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhh
Confidence 355788999986 999999999999999762 1 1111111
Q ss_pred -----------CCCCCCEEeCC--CCCCCccCCCCcccccccccccEEEecCcccccc-----------------CCccc
Q 003199 39 -----------NLTNLEVLSFN--ENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQ-----------------IPASI 88 (840)
Q Consensus 39 -----------~l~~L~~L~L~--~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~-----------------~~~~~ 88 (840)
....++.+.+. .| .+..+|. .|.++++|++|+|++|.+++. +|..+
T Consensus 168 ~~l~~~~~~~~~~~~l~~l~l~~~~n---~l~~ip~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l 243 (636)
T 4eco_A 168 SDPQQKSIKKSSRITLKDTQIGQLSN---NITFVSK-AVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDL 243 (636)
T ss_dssp HCTTSCCCCCCCCCCCCTTTTTCCSC---EEEEECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCC
T ss_pred cCccccccccccccchhhhhhccccC---CCccCCH-HHhcccCCCEEECcCCccccccccccccccccchhcccCchhh
Confidence 11122222222 34 5555654 588888888888888888875 88888
Q ss_pred c--CCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccc-cCCcccCCC------CCCCeeeccCCcccccCCc
Q 003199 89 G--NVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAG-TIPEELGNL------TELTDLDMSVNHLSGKIPE 159 (840)
Q Consensus 89 ~--~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~-~~p~~l~~l------~~L~~L~L~~n~l~~~~~~ 159 (840)
+ ++++|++|+|++|.+.+.+|..|.++++|++|+|++|+.+.+ .+|..++.+ ++|++|+|++|+++ .+|.
T Consensus 244 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~ 322 (636)
T 4eco_A 244 KWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPV 322 (636)
T ss_dssp CGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCC
T ss_pred hhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCc
Confidence 8 888888888888888888888888888888888888864555 677777665 88888888888888 6777
Q ss_pred --cccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCC-cceeccccccccccCCccccCC
Q 003199 160 --SILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSP-LVVLDLSENKLSGPLPAKVCSR 236 (840)
Q Consensus 160 --~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~~~~~l 236 (840)
.+..+++|++|++++|++++.+| .|..+++|++|+|++|+++ .+|..+..+++ |++|+|++|+++ .+|..+...
T Consensus 323 ~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~ 399 (636)
T 4eco_A 323 ETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAK 399 (636)
T ss_dssp HHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTT
T ss_pred hhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhc
Confidence 78888888888888888886677 7888888888888888888 67777888888 888888888888 667777665
Q ss_pred C--CchhhhcccccccccCCcccc-------cccCCceEEeeCceeeccCCcc-ccCCCcccEEeccCCcccccCCcccC
Q 003199 237 G--KLQYFLVLQNMFSGVLPDSLA-------RCKNLLRFRVSNNHLEGSIPEG-ILSLPHVSIIDLSYNSFSGPIANTVG 306 (840)
Q Consensus 237 ~--~L~~L~l~~n~~~~~~~~~~~-------~l~~L~~L~l~~N~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~ 306 (840)
. +|++|++++|.+.+..|..+. .+++|++|++++|+++ .+|.. +..+++|+.|+|++|+++...+..+.
T Consensus 400 ~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~ 478 (636)
T 4eco_A 400 SVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLTEIPKNSLK 478 (636)
T ss_dssp CSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCSBCCSSSSE
T ss_pred ccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCCCcCHHHhc
Confidence 4 788888888888888888887 7788999999999998 45544 45688999999999999855555554
Q ss_pred CCC-------CCceeecccceeeeccchhhc--ccCcccEEEcCCCccCCCCCCcccCccccchhcc------cCCccCC
Q 003199 307 NAR-------NLSELFMQRNQISGFIPSEIY--RAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLML------QSNKLNS 371 (840)
Q Consensus 307 ~l~-------~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~ 371 (840)
... +|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+| ++|++.+
T Consensus 479 ~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~ 556 (636)
T 4eco_A 479 DENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLR 556 (636)
T ss_dssp ETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCC
T ss_pred cccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccc
Confidence 433 8999999999998 6777776 88999999999999986 8888888999999998 5677888
Q ss_pred CcchhcccccCCCEEECcCccccccCCchhhccCCCeEEccCCCCcCcC
Q 003199 372 SIPNSLSSLKSLNVLDLSNNLLTGYIPESLCELLPNSINFSNNRLSGPI 420 (840)
Q Consensus 372 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~l~l~~N~l~~~~ 420 (840)
.+|..+..+++|++|+|++|++ +.+|..+. -.++.|++++|++....
T Consensus 557 ~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~-~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 557 EWPEGITLCPSLTQLQIGSNDI-RKVNEKIT-PNISVLDIKDNPNISID 603 (636)
T ss_dssp CCCTTGGGCSSCCEEECCSSCC-CBCCSCCC-TTCCEEECCSCTTCEEE
T ss_pred cChHHHhcCCCCCEEECCCCcC-CccCHhHh-CcCCEEECcCCCCcccc
Confidence 9999999999999999999999 58888766 46789999999877543
No 29
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.2e-45 Score=436.38 Aligned_cols=414 Identities=21% Similarity=0.247 Sum_probs=351.7
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeC-CCCCC------------------------------------------
Q 003199 17 QNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSF-NENPG------------------------------------------ 53 (840)
Q Consensus 17 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L-~~N~~------------------------------------------ 53 (840)
..++.|+|++|+++|.+|..|++|++|+.|+| ++|.+
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57889999999999999999999999999999 66621
Q ss_pred --------------------------------CccCCCCcccccccccccEEEecCccccc-----------------cC
Q 003199 54 --------------------------------FKLWKLPESSIFRLTKLRIMVLATCALHG-----------------QI 84 (840)
Q Consensus 54 --------------------------------~~l~~l~~~~~~~l~~L~~L~L~~n~l~~-----------------~~ 84 (840)
..+..+|. .|.++++|+.|+|++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~-~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISK-AIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECG-GGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccchhH-HHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 01222554 59999999999999999998 38
Q ss_pred Ccccc--CCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccc-cCCcccCCC-------CCCCeeeccCCccc
Q 003199 85 PASIG--NVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAG-TIPEELGNL-------TELTDLDMSVNHLS 154 (840)
Q Consensus 85 ~~~~~--~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~-~~p~~l~~l-------~~L~~L~L~~n~l~ 154 (840)
|..++ ++++|++|+|++|.+.+.+|..|..+++|+.|+|++|+.+.+ .+|..++.+ ++|++|+|++|+++
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 99988 999999999999999999999999999999999999974555 677655544 59999999999999
Q ss_pred ccCCc--cccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCC-cceeccccccccccCCc
Q 003199 155 GKIPE--SILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSP-LVVLDLSENKLSGPLPA 231 (840)
Q Consensus 155 ~~~~~--~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~-L~~L~L~~N~l~~~~~~ 231 (840)
.+|. .|..+++|+.|+|++|+++ .+| .|..+++|++|+|++|+++ .+|..+..+++ |+.|+|++|+++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 7888 8999999999999999999 556 8999999999999999999 78888999999 999999999999 6788
Q ss_pred cccCCCC--chhhhcccccccccCCccc---c--cccCCceEEeeCceeeccCCcccc-CCCcccEEeccCCcccccCCc
Q 003199 232 KVCSRGK--LQYFLVLQNMFSGVLPDSL---A--RCKNLLRFRVSNNHLEGSIPEGIL-SLPHVSIIDLSYNSFSGPIAN 303 (840)
Q Consensus 232 ~~~~l~~--L~~L~l~~n~~~~~~~~~~---~--~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~ 303 (840)
.+..... |+.|++++|.+.+.+|... . .+++|+.|+|++|.++ .+|..+. .+++|+.|+|++|+++.....
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~ 715 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPEN 715 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTT
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChH
Confidence 8877754 9999999999998766432 2 3458999999999999 6676654 789999999999999965555
Q ss_pred ccCCC-------CCCceeecccceeeeccchhhc--ccCcccEEEcCCCccCCCCCCcccCccccchhcccC------Cc
Q 003199 304 TVGNA-------RNLSELFMQRNQISGFIPSEIY--RAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQS------NK 368 (840)
Q Consensus 304 ~~~~l-------~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~ 368 (840)
.+... ++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |+
T Consensus 716 ~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~ 793 (876)
T 4ecn_A 716 SLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNR 793 (876)
T ss_dssp SSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCB
T ss_pred HhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCccccc
Confidence 55433 39999999999999 7888887 99999999999999997 799999999999999976 88
Q ss_pred cCCCcchhcccccCCCEEECcCccccccCCchhhccCCCeEEccCCCCcCcCCcccccC--CCcccccCCCCCcc
Q 003199 369 LNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCELLPNSINFSNNRLSGPIPLSLIKE--GLVESFSGNPGLCV 441 (840)
Q Consensus 369 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~l~l~~N~l~~~~p~~~~~~--~~~~~~~~n~~~c~ 441 (840)
+.+.+|..|..+++|+.|+|++|+| +.+|..+.. .++.|++++|++....+..+... .....+.+|++.|.
T Consensus 794 l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~-~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~I 866 (876)
T 4ecn_A 794 ILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLTP-QLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQDI 866 (876)
T ss_dssp CCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCS-SSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSEE
T ss_pred ccccChHHHhcCCCCCEEECCCCCC-CccCHhhcC-CCCEEECCCCCCCccChHHccccccchheeecCCCcccc
Confidence 8899999999999999999999999 689988764 67899999999986655443221 13456667777663
No 30
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.9e-45 Score=426.68 Aligned_cols=409 Identities=20% Similarity=0.238 Sum_probs=358.4
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcE
Q 003199 17 QNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTD 96 (840)
Q Consensus 17 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 96 (840)
+++++|+|++|.|++..+.+|.++++|++|+|++| .+..+++..|.++++|++|+|++|.+++..|..|+++++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n---~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRC---EIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 104 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTC---CCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCC---cCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccc
Confidence 57999999999999888889999999999999999 778888889999999999999999999888899999999999
Q ss_pred EEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCC----cEEEe
Q 003199 97 LELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKL----RVLQL 172 (840)
Q Consensus 97 L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L 172 (840)
|+|++|.+++..+..|+.+++|++|+|++|.+....+|..|+++++|++|++++|.+++..+..+..+++| +.|++
T Consensus 105 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l 184 (570)
T 2z63_A 105 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 184 (570)
T ss_dssp EECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred ccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhccc
Confidence 99999999966666799999999999999984333578999999999999999999998888888888888 89999
Q ss_pred eccccccccchhhhcCCCCCEEEccCC-----------------------------------------------------
Q 003199 173 YNNSLSGEISSVIANSTTLTMLSLYDN----------------------------------------------------- 199 (840)
Q Consensus 173 ~~N~l~~~~~~~~~~l~~L~~L~L~~N----------------------------------------------------- 199 (840)
++|.+.+..+..|... +|+.|++++|
T Consensus 185 ~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~ 263 (570)
T 2z63_A 185 SLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFR 263 (570)
T ss_dssp TTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEE
T ss_pred CCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhh
Confidence 9999998888888766 7999988887
Q ss_pred -----cCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceee
Q 003199 200 -----SLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLE 274 (840)
Q Consensus 200 -----~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~ 274 (840)
.+.+..+..+..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.+. .+|. ..+++|+.|++++|.+.
T Consensus 264 l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~ 338 (570)
T 2z63_A 264 LAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGG 338 (570)
T ss_dssp EEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSC
T ss_pred hhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCccc
Confidence 333455677788899999999999998 577778888 9999999999998 4444 47889999999999998
Q ss_pred ccCCccccCCCcccEEeccCCcccccC--CcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCC-C
Q 003199 275 GSIPEGILSLPHVSIIDLSYNSFSGPI--ANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIP-S 351 (840)
Q Consensus 275 ~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~ 351 (840)
+..+. ..+++|+.|++++|++++.. +..+..+++|++|++++|++.+..+. +..+++|+.|++++|.+++..| .
T Consensus 339 ~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~ 415 (570)
T 2z63_A 339 NAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFS 415 (570)
T ss_dssp CBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSC
T ss_pred ccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchh
Confidence 66554 78999999999999998764 67788999999999999999976555 9999999999999999998766 5
Q ss_pred cccCccccchhcccCCccCCCcchhcccccCCCEEECcCcccc-ccCCchhhcc-CCCeEEccCCCCcCcCCcccccCC-
Q 003199 352 GIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLT-GYIPESLCEL-LPNSINFSNNRLSGPIPLSLIKEG- 428 (840)
Q Consensus 352 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~p~~~~~~-~~~~l~l~~N~l~~~~p~~~~~~~- 428 (840)
.+.++++|+.|+|++|++++..|..|..+++|++|+|++|.++ +.+|..+..+ .++.|++++|++++..|..+....
T Consensus 416 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 495 (570)
T 2z63_A 416 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 495 (570)
T ss_dssp TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccC
Confidence 7899999999999999999999999999999999999999998 6789888877 578999999999998887654432
Q ss_pred -CcccccCCC
Q 003199 429 -LVESFSGNP 437 (840)
Q Consensus 429 -~~~~~~~n~ 437 (840)
....+.+|.
T Consensus 496 L~~L~l~~n~ 505 (570)
T 2z63_A 496 LQVLNMASNQ 505 (570)
T ss_dssp CCEEECCSSC
T ss_pred CCEEeCCCCc
Confidence 345566664
No 31
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.7e-45 Score=435.53 Aligned_cols=403 Identities=21% Similarity=0.270 Sum_probs=348.3
Q ss_pred CccccccccCCC-CCCCCCCCEEec-CCCcCccc----------------------------------------------
Q 003199 1 MSFMYLTGTLPD-FSPMQNLRRLDL-SNNLFTGQ---------------------------------------------- 32 (840)
Q Consensus 1 ~~~~~~~~~~~~-~~~l~~L~~L~L-s~n~i~~~---------------------------------------------- 32 (840)
++.+.+.|.+|. |+.|++|++|+| ++|.+.+.
T Consensus 330 Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~ 409 (876)
T 4ecn_A 330 LAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAIN 409 (876)
T ss_dssp CTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHH
T ss_pred CccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhh
Confidence 355788999996 999999999999 77755433
Q ss_pred ------------------------------CCccccCCCCCCEEeCCCCCCCccCC------------------CCccc-
Q 003199 33 ------------------------------FPLSVFNLTNLEVLSFNENPGFKLWK------------------LPESS- 63 (840)
Q Consensus 33 ------------------------------~p~~~~~l~~L~~L~L~~N~~~~l~~------------------l~~~~- 63 (840)
+|..|+++++|+.|+|++| .+.. +|...
T Consensus 410 ~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N---~Lsg~~i~~~~~~~s~n~~~g~iP~~l~ 486 (876)
T 4ecn_A 410 RNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANS---PFTYDNIAVDWEDANSDYAKQYENEELS 486 (876)
T ss_dssp TCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESC---CCCGGGBSSSCSCTTSHHHHHHTTSCCC
T ss_pred hCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCC---cCCCCcccccccccccccccccCChhhh
Confidence 7889999999999999999 5555 66653
Q ss_pred ccccccccEEEecCccccccCCccccCCCCCcEEEccCCc-ccc-cCchhhhcCC-------CCCeeecccCccccccCC
Q 003199 64 IFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNF-ITG-HIPPEIGLLK-------NLRQLELYYNQQLAGTIP 134 (840)
Q Consensus 64 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-i~~-~~p~~~~~l~-------~L~~L~L~~n~~~~~~~p 134 (840)
|.++++|+.|+|++|.+.+.+|..|+++++|++|+|++|+ +++ .+|..+..++ +|+.|+|++|+ +. .+|
T Consensus 487 f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~-L~-~ip 564 (876)
T 4ecn_A 487 WSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNN-LE-EFP 564 (876)
T ss_dssp GGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSC-CC-BCC
T ss_pred hccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCc-CC-ccC
Confidence 4499999999999999999999999999999999999998 987 7888888776 99999999998 33 888
Q ss_pred c--ccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCC-CCEEEccCCcCcccCCcCCCC
Q 003199 135 E--ELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTT-LTMLSLYDNSLTGEVPQDLGQ 211 (840)
Q Consensus 135 ~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~l~~ 211 (840)
. .+.++++|++|+|++|+++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |++|+|++|+++ .+|..+..
T Consensus 565 ~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~ 640 (876)
T 4ecn_A 565 ASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNA 640 (876)
T ss_dssp CHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCT
T ss_pred ChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhc
Confidence 8 8999999999999999999 777 8999999999999999999 67778999999 999999999999 67888877
Q ss_pred CCC--cceeccccccccccCCcccc-----CCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCC
Q 003199 212 WSP--LVVLDLSENKLSGPLPAKVC-----SRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSL 284 (840)
Q Consensus 212 l~~--L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 284 (840)
++. |+.|+|++|++++.+|...+ ...+|+.|++++|.+....+..+..+++|+.|+|++|+++ .+|..+...
T Consensus 641 ~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~ 719 (876)
T 4ecn_A 641 KSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMT-SIPENSLKP 719 (876)
T ss_dssp TCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSC
T ss_pred cccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCC-ccChHHhcc
Confidence 654 99999999999987664332 3458999999999999554455568999999999999999 677655543
Q ss_pred --------CcccEEeccCCcccccCCcccC--CCCCCceeecccceeeeccchhhcccCcccEEEcCC------CccCCC
Q 003199 285 --------PHVSIIDLSYNSFSGPIANTVG--NARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSD------NLLSGP 348 (840)
Q Consensus 285 --------~~L~~L~L~~N~l~~~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~ 348 (840)
++|+.|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..+..+++|+.|+|++ |++.+.
T Consensus 720 ~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ 797 (876)
T 4ecn_A 720 KDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQ 797 (876)
T ss_dssp TTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCC
T ss_pred ccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCccccccccc
Confidence 29999999999999 5666676 89999999999999997 799999999999999977 888889
Q ss_pred CCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhcc-CCCeEEccCCCCcC
Q 003199 349 IPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCEL-LPNSINFSNNRLSG 418 (840)
Q Consensus 349 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~~~l~l~~N~l~~ 418 (840)
+|..+.++++|+.|+|++|+| +.+|..+. ++|+.|||++|++....+..++.. ....+.+.+|++..
T Consensus 798 ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 798 WPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYVLLYDKTQD 865 (876)
T ss_dssp CCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCEEECCTTSE
T ss_pred ChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchheeecCCCccc
Confidence 999999999999999999999 68888765 699999999999997767776665 45667788887653
No 32
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-45 Score=400.92 Aligned_cols=267 Identities=21% Similarity=0.301 Sum_probs=200.5
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec-
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS- 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 603 (840)
++|+..+.||+|+||+||+|.. .+|+.||||++..... .....+.+.+|+++|+.++|||||++++++..
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~--------~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~ 125 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFD--------VVTNAKRTLRELKILKHFKHDNIIAIKDILRPT 125 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTS--------SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECcccc--------chHHHHHHHHHHHHHHhcCCCCcceEeeeeecc
Confidence 4688899999999999999955 5899999999954321 12335678899999999999999999998754
Q ss_pred -----CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeee
Q 003199 604 -----LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVA 678 (840)
Q Consensus 604 -----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 678 (840)
....|+|||||+ |+|.+++.... .+++..+..++.||+.||+|||+ ++||||||||+|||++.++.+||+
T Consensus 126 ~~~~~~~~~~ivmE~~~-g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~ 200 (398)
T 4b99_A 126 VPYGEFKSVYVVLDLME-SDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIG 200 (398)
T ss_dssp SCTTTCCCEEEEEECCS-EEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEEC
T ss_pred cccccCCEEEEEEeCCC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEe
Confidence 356799999995 78999998764 79999999999999999999999 999999999999999999999999
Q ss_pred cccchhhhhccCC-CCcceecccccccccCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhh
Q 003199 679 DFGIAKVLQARGG-KDSTTTVIAGTYGYLAPEYAYSS-KATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIK 756 (840)
Q Consensus 679 Dfg~a~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 756 (840)
|||+|+.+..... ........+||+.|||||++.+. .++.++||||+||++|||++|+.||.+.... ..+.......
T Consensus 201 DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~ 279 (398)
T 4b99_A 201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVL 279 (398)
T ss_dssp CCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHH
T ss_pred ecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhc
Confidence 9999987643211 22334567899999999998775 5699999999999999999999999763210 0000000000
Q ss_pred hccc-cc--------hhh---hcccccCCCcH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 757 VDTK-EG--------IME---VLDKKLSGSFR----DEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 757 ~~~~-~~--------~~~---~~~~~~~~~~~----~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.... .. ... ......+..+. ....++.+|+.+|+..||++|||+.|+++|
T Consensus 280 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 280 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000 00 000 00001111111 123467788999999999999999999987
No 33
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.2e-44 Score=419.25 Aligned_cols=412 Identities=20% Similarity=0.175 Sum_probs=308.9
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcE
Q 003199 17 QNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTD 96 (840)
Q Consensus 17 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 96 (840)
++|++|+|++|.|++..|..|.++++|++|+|++| .+..+++..|.++++|++|+|++|.+++..|..|+++++|++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n---~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 102 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSS---RINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKY 102 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTS---CCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCE
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCC---CcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcE
Confidence 78999999999999888999999999999999999 777888889999999999999999999887788999999999
Q ss_pred EEccCCccccc-CchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeecc
Q 003199 97 LELTGNFITGH-IPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNN 175 (840)
Q Consensus 97 L~L~~n~i~~~-~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 175 (840)
|+|++|.+++. .|..|..+++|++|++++|+.+....+..+.++++|++|++++|.+++..|..+..+++|++|+++.|
T Consensus 103 L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 103 LNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp EECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECS
T ss_pred EECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccC
Confidence 99999999863 56789999999999999997444444468999999999999999999989999999999999999999
Q ss_pred ccccccchhhhcCCCCCEEEccCCcCcccC--C-cCCCCCCCcceeccccccccccCCccc----cC-------------
Q 003199 176 SLSGEISSVIANSTTLTMLSLYDNSLTGEV--P-QDLGQWSPLVVLDLSENKLSGPLPAKV----CS------------- 235 (840)
Q Consensus 176 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~-~~l~~l~~L~~L~L~~N~l~~~~~~~~----~~------------- 235 (840)
.+.......+..+++|++|++++|++++.. + .....+++|+.|++++|.+++..+..+ ..
T Consensus 183 ~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~ 262 (549)
T 2z81_A 183 ESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCT 262 (549)
T ss_dssp BSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCE
T ss_pred cccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccc
Confidence 988665555677999999999999998642 1 222345566666666665543221111 11
Q ss_pred ----------------------------------------------CCCchhhhcccccccccCCccc-ccccCCceEEe
Q 003199 236 ----------------------------------------------RGKLQYFLVLQNMFSGVLPDSL-ARCKNLLRFRV 268 (840)
Q Consensus 236 ----------------------------------------------l~~L~~L~l~~n~~~~~~~~~~-~~l~~L~~L~l 268 (840)
.++|+.|++++|.+. .+|..+ ..+++|++|++
T Consensus 263 ~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~L 341 (549)
T 2z81_A 263 LNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDL 341 (549)
T ss_dssp EECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEEC
T ss_pred ccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEc
Confidence 234555555555554 334333 45677777777
Q ss_pred eCceeeccCC---ccccCCCcccEEeccCCcccccCC--cccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCC
Q 003199 269 SNNHLEGSIP---EGILSLPHVSIIDLSYNSFSGPIA--NTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDN 343 (840)
Q Consensus 269 ~~N~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 343 (840)
++|++++..| ..+..+++|+.|++++|++++..+ ..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|
T Consensus 342 s~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N 420 (549)
T 2z81_A 342 SENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSST 420 (549)
T ss_dssp CSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTS
T ss_pred cCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCC
Confidence 7777765443 235566777777777777765432 34666777777777777776 45666666677777777777
Q ss_pred ccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhccCCCeEEccCCCCcCcCCcc
Q 003199 344 LLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCELLPNSINFSNNRLSGPIPLS 423 (840)
Q Consensus 344 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~l~l~~N~l~~~~p~~ 423 (840)
+++ .+|..+. ++|+.|+|++|+|++.+ ..+++|++|+|++|+|+ .+|....-..++.|++++|++++..|..
T Consensus 421 ~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~ 492 (549)
T 2z81_A 421 GIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGI 492 (549)
T ss_dssp CCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTTG
T ss_pred Ccc-cccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCCcccCccCCEEecCCCccCCcCHHH
Confidence 766 3343332 46777777777776532 47889999999999998 7776433226789999999999988865
Q ss_pred cccCC--CcccccCCCCCcc
Q 003199 424 LIKEG--LVESFSGNPGLCV 441 (840)
Q Consensus 424 ~~~~~--~~~~~~~n~~~c~ 441 (840)
+.... ....+.+|||.|.
T Consensus 493 ~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 493 FDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp GGGCTTCCEEECCSSCBCCC
T ss_pred HhcCcccCEEEecCCCccCC
Confidence 54432 4568889999884
No 34
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.2e-44 Score=390.35 Aligned_cols=200 Identities=24% Similarity=0.386 Sum_probs=168.2
Q ss_pred HHHhcCccCeeeccCCcEEEEEEeC----CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceee
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDLN----SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLY 598 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 598 (840)
+.+.|+..+.||+|+||+||+|..+ +++.||||++.... ....+.+|+++++.+ .|||||+++
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~------------~~~~~~~E~~~l~~~~~h~nIv~l~ 86 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS------------HPIRIAAELQCLTVAGGQDNVMGVK 86 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS------------CHHHHHHHHHHHHHTCSBTTBCCCS
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc------------CHHHHHHHHHHHHHhcCCCCCceEE
Confidence 3467999999999999999999542 47899999884332 124577899999988 699999999
Q ss_pred eEEecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCC-CCCee
Q 003199 599 CYFSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVN-YQPKV 677 (840)
Q Consensus 599 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~kl 677 (840)
+++.+.+..++||||+++|+|.+++. .+++.++..++.|++.||+|||+ +|||||||||+|||++.+ +.+||
T Consensus 87 ~~~~~~~~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl 159 (361)
T 4f9c_A 87 YCFRKNDHVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYAL 159 (361)
T ss_dssp EEEEETTEEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEE
T ss_pred EEEEECCEEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEE
Confidence 99999999999999999999999984 48999999999999999999999 999999999999999876 79999
Q ss_pred ecccchhhhhccCCC-------------------------CcceecccccccccCccccccC-CCCccccchhHHHHHHH
Q 003199 678 ADFGIAKVLQARGGK-------------------------DSTTTVIAGTYGYLAPEYAYSS-KATTKCDVYSFGVVLME 731 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~e 731 (840)
+|||+|+...+.... .......+||+.|||||++.+. .++.++||||+||++||
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~e 239 (361)
T 4f9c_A 160 VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLS 239 (361)
T ss_dssp CCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred CcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHH
Confidence 999999765331100 1122345799999999998775 58999999999999999
Q ss_pred HHhCCCCCCCC
Q 003199 732 LITGRKPVEDD 742 (840)
Q Consensus 732 l~tg~~p~~~~ 742 (840)
|++|+.||...
T Consensus 240 ll~G~~Pf~~~ 250 (361)
T 4f9c_A 240 LLSGRYPFYKA 250 (361)
T ss_dssp HHHTCSSSSCC
T ss_pred HHHCCCCCCCC
Confidence 99999999643
No 35
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.2e-44 Score=409.55 Aligned_cols=255 Identities=22% Similarity=0.298 Sum_probs=200.4
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||+||+|.. .+|+.||||++........ ...........++.+++.++|||||++++++.+.
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~----~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~ 264 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK----QGETLALNERIMLSLVSTGDCPFIVCMSYAFHTP 264 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT----TCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECS
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchh----hhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEEC
Confidence 4688889999999999999965 4799999999954332110 1112222334456778888999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
+..|+|||||+||+|.+++.+.. .+++..+..++.||+.||+|||+ ++||||||||+|||++.+|++||+|||+|+
T Consensus 265 ~~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 265 DKLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999999999999998765 69999999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
.+.. ......+||+.|||||++.+ ..|+.++||||+||++|||++|+.||.+....... ........
T Consensus 341 ~~~~-----~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~--~i~~~i~~----- 408 (689)
T 3v5w_A 341 DFSK-----KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH--EIDRMTLT----- 408 (689)
T ss_dssp ECSS-----CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHH--HHHHHHHH-----
T ss_pred ecCC-----CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHhhcC-----
Confidence 7633 22345689999999999964 57999999999999999999999999753221111 11111100
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPT-----MNEVVQL 806 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~evl~~ 806 (840)
....++..+ ..++.+++.+|++.||++|++ ++||++|
T Consensus 409 ---~~~~~p~~~---S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 409 ---MAVELPDSF---SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp ---CCCCCCTTS---CHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred ---CCCCCCccC---CHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 011122222 345667788999999999998 7888876
No 36
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=3.9e-44 Score=414.93 Aligned_cols=407 Identities=20% Similarity=0.218 Sum_probs=328.3
Q ss_pred CccccccccCCC-CCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcc
Q 003199 1 MSFMYLTGTLPD-FSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCA 79 (840)
Q Consensus 1 ~~~~~~~~~~~~-~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~ 79 (840)
++.|.+++..|. |.++++|++|+|++|.|++..|.+|.++++|++|+|++| .+..+++..|..+++|++|+|++|.
T Consensus 33 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n---~l~~~~~~~~~~l~~L~~L~Ls~n~ 109 (549)
T 2z81_A 33 LSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDN---HLSSLSSSWFGPLSSLKYLNLMGNP 109 (549)
T ss_dssp CCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS---CCCSCCHHHHTTCTTCCEEECTTCC
T ss_pred CcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCC---ccCccCHHHhccCCCCcEEECCCCc
Confidence 456788888775 999999999999999999888899999999999999999 7888888889999999999999999
Q ss_pred ccc-cCCccccCCCCCcEEEccCCc-ccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccC
Q 003199 80 LHG-QIPASIGNVTSLTDLELTGNF-ITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKI 157 (840)
Q Consensus 80 l~~-~~~~~~~~l~~L~~L~L~~n~-i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~ 157 (840)
+++ ..|..++++++|++|+|++|. +....+..|..+++|++|++++|+ +.+..|..+..+++|++|++++|.+....
T Consensus 110 l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~l~~l~~L~~L~l~~n~~~~~~ 188 (549)
T 2z81_A 110 YQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALS-LRNYQSQSLKSIRDIHHLTLHLSESAFLL 188 (549)
T ss_dssp CSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT-CCEECTTTTTTCSEEEEEEEECSBSTTHH
T ss_pred ccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCc-ccccChhhhhccccCceEecccCcccccc
Confidence 986 357789999999999999998 554445789999999999999998 66677888888888888888777776333
Q ss_pred CccccCCCCCcEEEeecccccccc-------------------------------chhhhcCCCCCEEEccCCcCcccCC
Q 003199 158 PESILRLPKLRVLQLYNNSLSGEI-------------------------------SSVIANSTTLTMLSLYDNSLTGEVP 206 (840)
Q Consensus 158 ~~~~~~l~~L~~L~L~~N~l~~~~-------------------------------~~~~~~l~~L~~L~L~~N~l~~~~~ 206 (840)
...+..+++|++|++++|++++.. +..+..+++|+.|++++|.+.+...
T Consensus 189 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~ 268 (549)
T 2z81_A 189 EIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGD 268 (549)
T ss_dssp HHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSC
T ss_pred hhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccccccc
Confidence 223345777777777777776531 1122344555666666655543210
Q ss_pred ---------cCC--------------------------CCCCCcceeccccccccccCCccc-cCCCCchhhhccccccc
Q 003199 207 ---------QDL--------------------------GQWSPLVVLDLSENKLSGPLPAKV-CSRGKLQYFLVLQNMFS 250 (840)
Q Consensus 207 ---------~~l--------------------------~~l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~l~~n~~~ 250 (840)
..+ ....+|+.|++++|+++ .+|..+ ..+++|++|++++|.+.
T Consensus 269 ~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~ 347 (549)
T 2z81_A 269 FNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMV 347 (549)
T ss_dssp CCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCC
T ss_pred ccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccc
Confidence 001 11246888888888887 456555 57999999999999999
Q ss_pred ccCC---cccccccCCceEEeeCceeeccCC--ccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeecc
Q 003199 251 GVLP---DSLARCKNLLRFRVSNNHLEGSIP--EGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFI 325 (840)
Q Consensus 251 ~~~~---~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 325 (840)
+..| ..++.+++|++|++++|++++..+ ..+..+++|+.|++++|+++ .+|..+..+++|++|+|++|++++ +
T Consensus 348 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l 425 (549)
T 2z81_A 348 EEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-V 425 (549)
T ss_dssp HHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-C
T ss_pred cccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-c
Confidence 8764 347889999999999999985432 45888999999999999999 467788899999999999999984 4
Q ss_pred chhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhcc-
Q 003199 326 PSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCEL- 404 (840)
Q Consensus 326 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~- 404 (840)
|..+. ++|+.|+|++|++++.+ ..+++|+.|+|++|+|+ .+|. ...+++|++|||++|+|++.+|..+..+
T Consensus 426 ~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 497 (549)
T 2z81_A 426 KTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLT 497 (549)
T ss_dssp CTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCT
T ss_pred cchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCc
Confidence 54442 58999999999999643 57899999999999998 5665 4679999999999999999888888877
Q ss_pred CCCeEEccCCCCcCcCCc
Q 003199 405 LPNSINFSNNRLSGPIPL 422 (840)
Q Consensus 405 ~~~~l~l~~N~l~~~~p~ 422 (840)
.++.|++++|++.|.+|.
T Consensus 498 ~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 498 SLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp TCCEEECCSSCBCCCHHH
T ss_pred ccCEEEecCCCccCCCcc
Confidence 578999999999999983
No 37
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=5.7e-44 Score=408.77 Aligned_cols=254 Identities=21% Similarity=0.343 Sum_probs=206.8
Q ss_pred HHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
+.++|+..+.||+|+||+||+|.. .+|+.||||++.... ....+.+.+|+.+|+.++|||||++++++.
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~----------~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~ 224 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH----------ESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----------HHHHHHHHHHHHHHHHTCCTTBCCEEEEEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc----------hhhHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 346799999999999999999955 579999999985432 223467889999999999999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCC--CCCeeecc
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVN--YQPKVADF 680 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~--~~~kl~Df 680 (840)
+....++|||||++|+|.+++......+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+||
T Consensus 225 ~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DF 301 (573)
T 3uto_A 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDF 301 (573)
T ss_dssp CSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCC
T ss_pred ECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeec
Confidence 9999999999999999999997665579999999999999999999999 999999999999999854 78999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
|+|+.+.. .......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+... ... ........
T Consensus 302 G~a~~~~~----~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~--~~~---~~~i~~~~ 372 (573)
T 3uto_A 302 GLTAHLDP----KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND--DET---LRNVKSCD 372 (573)
T ss_dssp SSCEECCT----TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHH---HHHHHTTC
T ss_pred cceeEccC----CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHH---HHHHHhCC
Confidence 99987632 3344566899999999999999999999999999999999999999975311 111 10000000
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.. .. ...+......+.+++.+||+.||.+|||+.|+++|
T Consensus 373 ~~----~~---~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 373 WN----MD---DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp CC----CC---SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CC----CC---cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00 00 01112223456678889999999999999999986
No 38
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1e-42 Score=393.08 Aligned_cols=370 Identities=19% Similarity=0.157 Sum_probs=236.9
Q ss_pred EEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccc-cCCccccCCCCCcEEEc
Q 003199 21 RLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHG-QIPASIGNVTSLTDLEL 99 (840)
Q Consensus 21 ~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L 99 (840)
.++.++++++ .+|. + .++|++|+|++| .+..+++..|.++++|++|+|++|.+.+ ..+..|.++++|++|+|
T Consensus 14 ~~~c~~~~l~-~lp~-l--~~~l~~L~Ls~n---~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~L 86 (455)
T 3v47_A 14 NAICINRGLH-QVPE-L--PAHVNYVDLSLN---SIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKL 86 (455)
T ss_dssp EEECCSSCCS-SCCC-C--CTTCCEEECCSS---CCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEEC
T ss_pred ccCcCCCCcc-cCCC-C--CCccCEEEecCC---ccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeC
Confidence 4555555555 4444 2 145555555555 4444445555555555555555555542 22345555666666666
Q ss_pred cCCcccccCchhhhcCCCCCeeecccCccccccCCc--ccCCCCCCCeeeccCCcccccCCcc-ccCCCCCcEEEeeccc
Q 003199 100 TGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPE--ELGNLTELTDLDMSVNHLSGKIPES-ILRLPKLRVLQLYNNS 176 (840)
Q Consensus 100 ~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~--~l~~l~~L~~L~L~~n~l~~~~~~~-~~~l~~L~~L~L~~N~ 176 (840)
++|++++..|..|..+++|++|+|++|+ +.+..+. .+..+++|++|+|++|.+++..|.. +..+++|++|++++|+
T Consensus 87 s~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 87 DYNQFLQLETGAFNGLANLEVLTLTQCN-LDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp TTCTTCEECTTTTTTCTTCCEEECTTSC-CBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCccCccChhhccCcccCCEEeCCCCC-CCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 6666655555556666666666666555 2222222 2555666666666666665554443 5556666666666666
Q ss_pred cccccchhhhcC--CCCCEEEccCCcCcccCCcC--------CCCCCCcceeccccccccccCCccccCC---CCchhhh
Q 003199 177 LSGEISSVIANS--TTLTMLSLYDNSLTGEVPQD--------LGQWSPLVVLDLSENKLSGPLPAKVCSR---GKLQYFL 243 (840)
Q Consensus 177 l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~~~~--------l~~l~~L~~L~L~~N~l~~~~~~~~~~l---~~L~~L~ 243 (840)
+++..+..+..+ .+|+.|++++|.+.+..+.. +..+++|++|+|++|++++..|..+... .+|+.|+
T Consensus 166 l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~ 245 (455)
T 3v47_A 166 VKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLI 245 (455)
T ss_dssp BSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEE
T ss_pred ccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEe
Confidence 655555555544 45666666666665433322 2234556666666666655555544433 4555555
Q ss_pred cccccccc----------cCCcccccc--cCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCC
Q 003199 244 VLQNMFSG----------VLPDSLARC--KNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNL 311 (840)
Q Consensus 244 l~~n~~~~----------~~~~~~~~l--~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 311 (840)
+++|.+.+ ..+..+..+ ++|+.|++++|++.+..|..+..+++|+.|+|++|++++..+..|+.+++|
T Consensus 246 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 325 (455)
T 3v47_A 246 LSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHL 325 (455)
T ss_dssp CTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred eccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccC
Confidence 55553332 222333333 578888888888887778888888888888888888888778888888888
Q ss_pred ceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCc
Q 003199 312 SELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNN 391 (840)
Q Consensus 312 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N 391 (840)
++|+|++|++++..|..+..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|
T Consensus 326 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 405 (455)
T 3v47_A 326 LKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTN 405 (455)
T ss_dssp CEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCC
Confidence 88888888888777888888888888888888888777888888888888888888888766677788888888888888
Q ss_pred cccccCC
Q 003199 392 LLTGYIP 398 (840)
Q Consensus 392 ~l~~~~p 398 (840)
++++.+|
T Consensus 406 ~l~~~~~ 412 (455)
T 3v47_A 406 PWDCSCP 412 (455)
T ss_dssp CBCCCTT
T ss_pred CcccCCC
Confidence 8887777
No 39
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=399.61 Aligned_cols=419 Identities=21% Similarity=0.239 Sum_probs=319.4
Q ss_pred CccccccccCCC-CCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcc
Q 003199 1 MSFMYLTGTLPD-FSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCA 79 (840)
Q Consensus 1 ~~~~~~~~~~~~-~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~ 79 (840)
++.+.+++ +|. +. ++|++|+|++|.|++..|..|.++++|++|+|++| ++..+++..|.++++|++|+|++|.
T Consensus 7 ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n---~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 7 RSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHN---RIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp CTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSS---CCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred cCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCC---ccCCcChHHhhcccCCCEEecCCCc
Confidence 35677775 554 54 89999999999999888889999999999999999 7778888889999999999999999
Q ss_pred ccccCCccccCCCCCcEEEccCCcccc-cCchhhhcCCCCCeeecccCccccccCCcccCCCCCC--CeeeccCCcc--c
Q 003199 80 LHGQIPASIGNVTSLTDLELTGNFITG-HIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTEL--TDLDMSVNHL--S 154 (840)
Q Consensus 80 l~~~~~~~~~~l~~L~~L~L~~n~i~~-~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L--~~L~L~~n~l--~ 154 (840)
+++ +|.. .+++|++|+|++|++++ ..|..|+.+++|++|+|++|++ .+ ..+..+++| ++|+|++|.+ .
T Consensus 81 l~~-lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l-~~---~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 81 LVK-ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHL-EK---SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CCE-EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSC-CG---GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred eee-cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCccc-ch---hhccccccceeeEEEeeccccccc
Confidence 984 5555 79999999999999996 3689999999999999999983 32 356777888 9999999999 5
Q ss_pred ccCCccccC--------------------------CCCCcEEEeeccc-------cccccchhhhcCCCCCEEEccCCcC
Q 003199 155 GKIPESILR--------------------------LPKLRVLQLYNNS-------LSGEISSVIANSTTLTMLSLYDNSL 201 (840)
Q Consensus 155 ~~~~~~~~~--------------------------l~~L~~L~L~~N~-------l~~~~~~~~~~l~~L~~L~L~~N~l 201 (840)
+..|..+.. +++|+.|++++|. +.+.++ .+..+++|++|++++|.+
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l 232 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIET 232 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEE
T ss_pred ccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhcccccccc
Confidence 566655554 6678888888876 555444 677788888888887777
Q ss_pred cccCCcCCC---CCCCcceeccccccccccCCccc-----cCCCCchhhhcccccccccCC-cccccc---cCCceEEee
Q 003199 202 TGEVPQDLG---QWSPLVVLDLSENKLSGPLPAKV-----CSRGKLQYFLVLQNMFSGVLP-DSLARC---KNLLRFRVS 269 (840)
Q Consensus 202 ~~~~~~~l~---~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~l~~n~~~~~~~-~~~~~l---~~L~~L~l~ 269 (840)
++..+..+. ..++|+.|++++|++++.+|..+ ..+.+|+.+++++|.+ .+| ..+..+ .+|+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~ 310 (520)
T 2z7x_B 233 TWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVS 310 (520)
T ss_dssp EHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEE
T ss_pred CHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcC
Confidence 643221111 13578888888888888888877 7788888888888888 344 455544 568888888
Q ss_pred CceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeee--ccchhhcccCcccEEEcCCCccCC
Q 003199 270 NNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISG--FIPSEIYRAISLVKIDLSDNLLSG 347 (840)
Q Consensus 270 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~ 347 (840)
+|.+... + .+..+++|++|++++|++++..+..++.+++|++|+|++|++++ .+|..+..+++|+.|+|++|++++
T Consensus 311 ~n~l~~~-~-~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 388 (520)
T 2z7x_B 311 GTRMVHM-L-CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388 (520)
T ss_dssp SSCCCCC-C-CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBC
T ss_pred CCccccc-c-chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCc
Confidence 8887632 2 12567788888888888887777788888888888888888876 455677888888888888888886
Q ss_pred CCCC-cccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhcc-CCCeEEccCCCCcCcCCcc-c
Q 003199 348 PIPS-GIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCEL-LPNSINFSNNRLSGPIPLS-L 424 (840)
Q Consensus 348 ~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~~~l~l~~N~l~~~~p~~-~ 424 (840)
.+|. .+..+++|+.|+|++|++++..|..+. ++|+.|||++|+++ .+|..+..+ .++.|++++|++++ +|.. +
T Consensus 389 ~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~~~ 464 (520)
T 2z7x_B 389 DEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDGIF 464 (520)
T ss_dssp CGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTTTT
T ss_pred ccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHHHh
Confidence 4554 477788888888888888777766654 67888888888888 677766655 56788888888874 5543 3
Q ss_pred ccC--CCcccccCCCCCcc
Q 003199 425 IKE--GLVESFSGNPGLCV 441 (840)
Q Consensus 425 ~~~--~~~~~~~~n~~~c~ 441 (840)
... .....+.+||+.|.
T Consensus 465 ~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 465 DRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp TTCTTCCEEECCSSCBCCC
T ss_pred ccCCcccEEECcCCCCccc
Confidence 222 23456778888774
No 40
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.2e-41 Score=401.65 Aligned_cols=402 Identities=21% Similarity=0.213 Sum_probs=257.1
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcE
Q 003199 17 QNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTD 96 (840)
Q Consensus 17 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 96 (840)
+++++|||++|.|++..|.+|.++++|++|+|++| .|..+++.+|.++++|++|+|++|.+++..++.|.++++|++
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N---~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~ 128 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRC---EIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQK 128 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTC---CCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCE
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCC---cCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCE
Confidence 36888888888888777778888888888888888 677778888888888888888888888777777888888888
Q ss_pred EEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCC----cEEEe
Q 003199 97 LELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKL----RVLQL 172 (840)
Q Consensus 97 L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L----~~L~L 172 (840)
|+|++|+|++..+..|+.+++|++|+|++|++.....|..+..+++|++|+|++|++++..+..|..+.++ ..+++
T Consensus 129 L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~l 208 (635)
T 4g8a_A 129 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDL 208 (635)
T ss_dssp EECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEEC
T ss_pred EECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhc
Confidence 88888888866666788888888888888874444567778888888888888888876666555443322 23334
Q ss_pred eccccccccch---------------------------------------------------------------------
Q 003199 173 YNNSLSGEISS--------------------------------------------------------------------- 183 (840)
Q Consensus 173 ~~N~l~~~~~~--------------------------------------------------------------------- 183 (840)
+.|.+..+.+.
T Consensus 209 s~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~ 288 (635)
T 4g8a_A 209 SLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 288 (635)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEE
T ss_pred ccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhh
Confidence 33333221111
Q ss_pred ----------------------------------hhhcCCCCCEEEccCCcCcccCCcC-------------------CC
Q 003199 184 ----------------------------------VIANSTTLTMLSLYDNSLTGEVPQD-------------------LG 210 (840)
Q Consensus 184 ----------------------------------~~~~l~~L~~L~L~~N~l~~~~~~~-------------------l~ 210 (840)
.+.....|+.|++.+|.+....+.. ..
T Consensus 289 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~ 368 (635)
T 4g8a_A 289 AYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEV 368 (635)
T ss_dssp ECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCC
T ss_pred hhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccc
Confidence 1122234444444444443222111 11
Q ss_pred CCCCcceeccccccccc--cCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCC-ccccCCCcc
Q 003199 211 QWSPLVVLDLSENKLSG--PLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIP-EGILSLPHV 287 (840)
Q Consensus 211 ~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L 287 (840)
.+++|+.|++++|.+.. ..+..+..+.+|+++++..|.+.. .+..+..+++|+.+++++|......+ ..+..++++
T Consensus 369 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l 447 (635)
T 4g8a_A 369 DLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 447 (635)
T ss_dssp BCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTC
T ss_pred cccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccc
Confidence 23344444444444421 223333344444444444444432 23345556666666666666553333 345556667
Q ss_pred cEEeccCCcccccCCcccCCCCCCceeecccceee-eccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccC
Q 003199 288 SIIDLSYNSFSGPIANTVGNARNLSELFMQRNQIS-GFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQS 366 (840)
Q Consensus 288 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 366 (840)
+.+++++|.+.+..+..+..++.|+.|+|++|.+. +..|..+..+++|+.|+|++|+|++..|..|+++++|+.|+|++
T Consensus 448 ~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~ 527 (635)
T 4g8a_A 448 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSH 527 (635)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCC
Confidence 77777777776666666666777777777776643 34556666667777777777777766666677777777777777
Q ss_pred CccCCCcchhcccccCCCEEECcCccccccCCchhhcc--CCCeEEccCCCCcCcCCc
Q 003199 367 NKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCEL--LPNSINFSNNRLSGPIPL 422 (840)
Q Consensus 367 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~--~~~~l~l~~N~l~~~~p~ 422 (840)
|+|++..|..|..+++|++|||++|+|++..|..+..+ .++.|++++|++.|.|..
T Consensus 528 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 528 NNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp SCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred CcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 77776666667777777777777777776666666655 356677777777766653
No 41
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.7e-42 Score=367.33 Aligned_cols=273 Identities=35% Similarity=0.548 Sum_probs=220.9
Q ss_pred HHHhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
..++|+..+.||+|+||.||+|..++|+.||||++.... ....+.+.+|+++++.++||||+++++++.+
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES----------SQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC----------SSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred HHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC----------hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 446788899999999999999998889999999874432 1234678899999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCC---CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecc
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGL---VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADF 680 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 680 (840)
....++||||+++|+|.+++.... ..++|..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeec
Confidence 999999999999999999997653 358999999999999999999999 99999999999999999999999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCC-Ccchhhhhhhhhcc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGD-NKNIIYWVSIKVDT 759 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~ 759 (840)
|+++..... ..........||+.|+|||++.+..++.++||||||+++|||++|+.||...... ......|......
T Consensus 184 g~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~- 261 (321)
T 2qkw_B 184 GISKKGTEL-DQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHN- 261 (321)
T ss_dssp TTCEECSSS-SCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHT-
T ss_pred ccccccccc-cccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccc-
Confidence 999764321 1122234456899999999998889999999999999999999999999764332 2223333322111
Q ss_pred ccchhhhcccccCC-CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 760 KEGIMEVLDKKLSG-SFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 760 ~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
.......+++.... ...+....+.+++.+||+.||++|||+.|++++|+.+.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 262 NGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp TTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 11223334444433 33567788999999999999999999999999998653
No 42
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.9e-42 Score=394.33 Aligned_cols=404 Identities=21% Similarity=0.248 Sum_probs=344.3
Q ss_pred CccccccccCC-CCCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcc
Q 003199 1 MSFMYLTGTLP-DFSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCA 79 (840)
Q Consensus 1 ~~~~~~~~~~~-~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~ 79 (840)
++.|.+++..| .|+++++|++|+|++|.|++..|..|.++++|++|+|++| .+..+|.. .+++|++|+|++|.
T Consensus 28 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N---~l~~lp~~---~l~~L~~L~L~~N~ 101 (520)
T 2z7x_B 28 ISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN---KLVKISCH---PTVNLKHLDLSFNA 101 (520)
T ss_dssp CCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS---CCCEEECC---CCCCCSEEECCSSC
T ss_pred CCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC---ceeecCcc---ccCCccEEeccCCc
Confidence 45678888776 4999999999999999999888999999999999999999 56667765 89999999999999
Q ss_pred ccc-cCCccccCCCCCcEEEccCCcccccCchhhhcCCCC--CeeecccCccc-cccCCcccC-----------------
Q 003199 80 LHG-QIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNL--RQLELYYNQQL-AGTIPEELG----------------- 138 (840)
Q Consensus 80 l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L--~~L~L~~n~~~-~~~~p~~l~----------------- 138 (840)
+++ .+|..|+++++|++|+|++|.+++ ..+..+++| +.|++++|++. .+..|..+.
T Consensus 102 l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~ 178 (520)
T 2z7x_B 102 FDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEF 178 (520)
T ss_dssp CSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCC
T ss_pred cccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcch
Confidence 987 478999999999999999999985 468888888 99999999731 344444444
Q ss_pred ---------CCCCCCeeeccCCc-------ccccCCccccCCCCCcEEEeeccccccccchhhh---cCCCCCEEEccCC
Q 003199 139 ---------NLTELTDLDMSVNH-------LSGKIPESILRLPKLRVLQLYNNSLSGEISSVIA---NSTTLTMLSLYDN 199 (840)
Q Consensus 139 ---------~l~~L~~L~L~~n~-------l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~L~~N 199 (840)
.+++|+.|++++|. +.+.++ .+..+++|+.|++++|.+++..+..+. ..++|++|++++|
T Consensus 179 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n 257 (520)
T 2z7x_B 179 HFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNV 257 (520)
T ss_dssp CCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEE
T ss_pred hhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecc
Confidence 47788889999887 665555 788999999999999998754332221 2569999999999
Q ss_pred cCcccCCcCC-----CCCCCcceeccccccccccCC-ccccCC---CCchhhhcccccccccCCcccccccCCceEEeeC
Q 003199 200 SLTGEVPQDL-----GQWSPLVVLDLSENKLSGPLP-AKVCSR---GKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSN 270 (840)
Q Consensus 200 ~l~~~~~~~l-----~~l~~L~~L~L~~N~l~~~~~-~~~~~l---~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 270 (840)
++++.+|..+ ..+++|+.+++++|.+ .+| ..+..+ .+|+.|++++|.+.... .+..+++|++|++++
T Consensus 258 ~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~ 333 (520)
T 2z7x_B 258 KLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSN 333 (520)
T ss_dssp EEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCS
T ss_pred cccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeEC
Confidence 9998889888 8999999999999999 344 455544 67999999999987543 136889999999999
Q ss_pred ceeeccCCccccCCCcccEEeccCCcccc--cCCcccCCCCCCceeecccceeeeccch-hhcccCcccEEEcCCCccCC
Q 003199 271 NHLEGSIPEGILSLPHVSIIDLSYNSFSG--PIANTVGNARNLSELFMQRNQISGFIPS-EIYRAISLVKIDLSDNLLSG 347 (840)
Q Consensus 271 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~ 347 (840)
|++++..|..+..+++|+.|++++|++++ ..|..++.+++|++|+|++|++++.+|. .+..+++|+.|++++|++++
T Consensus 334 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 413 (520)
T 2z7x_B 334 NLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTD 413 (520)
T ss_dssp SCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCG
T ss_pred CccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCc
Confidence 99998899999999999999999999997 4557799999999999999999985665 47888999999999999998
Q ss_pred CCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCch-hhcc-CCCeEEccCCCCcCcCCc
Q 003199 348 PIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPES-LCEL-LPNSINFSNNRLSGPIPL 422 (840)
Q Consensus 348 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~-~~~~l~l~~N~l~~~~p~ 422 (840)
..|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|.. +..+ .++.|++++|+++|.++.
T Consensus 414 ~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 414 TIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp GGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred chhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCCCCcccCCc
Confidence 8877665 79999999999998 78887789999999999999999 56665 6665 578999999999999875
No 43
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.5e-41 Score=391.72 Aligned_cols=403 Identities=22% Similarity=0.241 Sum_probs=222.4
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcE
Q 003199 17 QNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTD 96 (840)
Q Consensus 17 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 96 (840)
...+++++++|+++ .+|..+. ++|++|+|++| .+..+++..|..+++|++|+|++|.+++..|+.|+++++|++
T Consensus 31 ~~~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N---~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 104 (562)
T 3a79_B 31 ELESMVDYSNRNLT-HVPKDLP--PRTKALSLSQN---SISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEY 104 (562)
T ss_dssp --CCEEECTTSCCC-SCCTTSC--TTCCEEECCSS---CCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCE
T ss_pred CCCcEEEcCCCCCc-cCCCCCC--CCcCEEECCCC---CccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCE
Confidence 33456666666666 4554443 56666666666 455556566666666666666666666666666666666666
Q ss_pred EEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCC--cEEEeec
Q 003199 97 LELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKL--RVLQLYN 174 (840)
Q Consensus 97 L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L--~~L~L~~ 174 (840)
|+|++|+|+ .+|.. .+++|++|+|++|++....+|..|.++++|++|+|++|.++.. .+..+++| +.|++++
T Consensus 105 L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~ 178 (562)
T 3a79_B 105 LDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDL 178 (562)
T ss_dssp EECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEE
T ss_pred EECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeec
Confidence 666666666 34443 5666666666666522223345666666666666666666542 23333444 6666666
Q ss_pred ccc--ccccchhhhc--------------------------CCCCCEEEccCCc--------------------------
Q 003199 175 NSL--SGEISSVIAN--------------------------STTLTMLSLYDNS-------------------------- 200 (840)
Q Consensus 175 N~l--~~~~~~~~~~--------------------------l~~L~~L~L~~N~-------------------------- 200 (840)
|.+ ++..+..+.. +++|+.|++++|+
T Consensus 179 n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~ 258 (562)
T 3a79_B 179 VSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQH 258 (562)
T ss_dssp SSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEE
T ss_pred ccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecC
Confidence 666 4444433333 2344444444442
Q ss_pred --Cccc----CCcCCCCCCCcceeccccccccccCCccc-----cCCCCchhhhcccccccccCC-cccccc---cCCce
Q 003199 201 --LTGE----VPQDLGQWSPLVVLDLSENKLSGPLPAKV-----CSRGKLQYFLVLQNMFSGVLP-DSLARC---KNLLR 265 (840)
Q Consensus 201 --l~~~----~~~~l~~l~~L~~L~L~~N~l~~~~~~~~-----~~l~~L~~L~l~~n~~~~~~~-~~~~~l---~~L~~ 265 (840)
+.+. .+..+ ..++|++|++++|++++.+|..+ ..+..|+.+++..+.+ .+| ..+..+ .+|++
T Consensus 259 ~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~ 335 (562)
T 3a79_B 259 IETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKM 335 (562)
T ss_dssp EEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSE
T ss_pred CcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceE
Confidence 2110 00011 12377888888888887777766 5555555555555554 222 222222 45666
Q ss_pred EEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeec--cchhhcccCcccEEEcCCC
Q 003199 266 FRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGF--IPSEIYRAISLVKIDLSDN 343 (840)
Q Consensus 266 L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls~N 343 (840)
|++++|.+... + ....+++|++|++++|++++..+..++.+++|++|+|++|++++. .|..+..+++|+.|+|++|
T Consensus 336 L~l~~n~~~~~-~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N 413 (562)
T 3a79_B 336 LSISDTPFIHM-V-CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLN 413 (562)
T ss_dssp EEEESSCCCCC-C-CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTS
T ss_pred EEccCCCcccc-c-CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCC
Confidence 66666665421 1 114556666666666666665666666666666666666666642 2345566666666666666
Q ss_pred ccCCCCCC-cccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhcc-CCCeEEccCCCCcCcCC
Q 003199 344 LLSGPIPS-GIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCEL-LPNSINFSNNRLSGPIP 421 (840)
Q Consensus 344 ~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~~~l~l~~N~l~~~~p 421 (840)
++++.+|. .+..+++|+.|+|++|++++..|..+. ++|++|+|++|+|+ .+|..+..+ .++.|++++|++++ +|
T Consensus 414 ~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~ 489 (562)
T 3a79_B 414 SLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKS-VP 489 (562)
T ss_dssp CCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCC-CC
T ss_pred cCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCC-CC
Confidence 66653333 355666666666666666555444433 46666666666666 455554444 34566666666663 34
Q ss_pred cc-cccC--CCcccccCCCCCc
Q 003199 422 LS-LIKE--GLVESFSGNPGLC 440 (840)
Q Consensus 422 ~~-~~~~--~~~~~~~~n~~~c 440 (840)
.. +... .....+.+|||.|
T Consensus 490 ~~~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 490 DGVFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp TTSTTTCTTCCCEECCSCCBCC
T ss_pred HHHHhcCCCCCEEEecCCCcCC
Confidence 32 2211 1234556666665
No 44
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.8e-41 Score=381.42 Aligned_cols=371 Identities=19% Similarity=0.178 Sum_probs=325.6
Q ss_pred CEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccc-cCchhhhcCCCCCeee
Q 003199 44 EVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITG-HIPPEIGLLKNLRQLE 122 (840)
Q Consensus 44 ~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~-~~p~~~~~l~~L~~L~ 122 (840)
+.++.+++ .+..+|. -.++|++|+|++|.+++..|..|+++++|++|+|++|.+.+ ..+..|..+++|++|+
T Consensus 13 ~~~~c~~~---~l~~lp~----l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 13 YNAICINR---GLHQVPE----LPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp TEEECCSS---CCSSCCC----CCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred cccCcCCC---CcccCCC----CCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 45777777 5666665 22789999999999999989999999999999999999974 4467899999999999
Q ss_pred cccCccccccCCcccCCCCCCCeeeccCCcccccCCcc--ccCCCCCcEEEeeccccccccchh-hhcCCCCCEEEccCC
Q 003199 123 LYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPES--ILRLPKLRVLQLYNNSLSGEISSV-IANSTTLTMLSLYDN 199 (840)
Q Consensus 123 L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~L~~N 199 (840)
|++|+ +.+..|..|.++++|++|+|++|.+++..+.. |..+++|++|+|++|++++..+.. +.++++|++|+|++|
T Consensus 86 Ls~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 86 LDYNQ-FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp CTTCT-TCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred CCCCc-cCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 99998 56677889999999999999999999755444 899999999999999999887765 899999999999999
Q ss_pred cCcccCCcCCCCC--CCcceeccccccccccCCccc--------cCCCCchhhhcccccccccCCcccccc---cCCceE
Q 003199 200 SLTGEVPQDLGQW--SPLVVLDLSENKLSGPLPAKV--------CSRGKLQYFLVLQNMFSGVLPDSLARC---KNLLRF 266 (840)
Q Consensus 200 ~l~~~~~~~l~~l--~~L~~L~L~~N~l~~~~~~~~--------~~l~~L~~L~l~~n~~~~~~~~~~~~l---~~L~~L 266 (840)
++++..+..+..+ .+|+.|++++|.+.+..+..+ ..+++|++|++++|.+.+..+..+... ++|+.|
T Consensus 165 ~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L 244 (455)
T 3v47_A 165 KVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSL 244 (455)
T ss_dssp CBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEE
T ss_pred cccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeE
Confidence 9998888888776 789999999999997665543 366899999999999999888887765 899999
Q ss_pred EeeCceeeccC----------CccccC--CCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCc
Q 003199 267 RVSNNHLEGSI----------PEGILS--LPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAIS 334 (840)
Q Consensus 267 ~l~~N~l~~~~----------~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 334 (840)
++++|.+.+.. +..+.. .++|+.|++++|++++..+..|+.+++|++|+|++|++++..|..+..+++
T Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 324 (455)
T 3v47_A 245 ILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTH 324 (455)
T ss_dssp ECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred eeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCccc
Confidence 99998665321 122222 368999999999999999999999999999999999999999999999999
Q ss_pred ccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhcc-CCCeEEccC
Q 003199 335 LVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCEL-LPNSINFSN 413 (840)
Q Consensus 335 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~~~l~l~~ 413 (840)
|+.|+|++|++++..|..|+++++|+.|+|++|++++..|.+|..+++|++|+|++|++++..+..+..+ .++.|++++
T Consensus 325 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 404 (455)
T 3v47_A 325 LLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 404 (455)
T ss_dssp CCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccC
Confidence 9999999999998888999999999999999999998889999999999999999999997666666666 578999999
Q ss_pred CCCcCcCCc
Q 003199 414 NRLSGPIPL 422 (840)
Q Consensus 414 N~l~~~~p~ 422 (840)
|+++|.+|.
T Consensus 405 N~l~~~~~~ 413 (455)
T 3v47_A 405 NPWDCSCPR 413 (455)
T ss_dssp SCBCCCTTT
T ss_pred CCcccCCCc
Confidence 999999994
No 45
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.9e-42 Score=367.81 Aligned_cols=279 Identities=38% Similarity=0.645 Sum_probs=222.6
Q ss_pred HHHHHhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 522 REILEAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 522 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
....++|...+.||+|+||.||+|...+|+.||||++...... .....+.+|+++++.++||||+++++++
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQ---------GGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------------CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred HHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCc---------hHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 3456789999999999999999998888999999998543321 1122588999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCC---CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeee
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGL---VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVA 678 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 678 (840)
......++||||+++|+|.+++.... ..++|..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999998653 348999999999999999999999222299999999999999999999999
Q ss_pred cccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCC---CCCCcchhhhhhh
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDD---FGDNKNIIYWVSI 755 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~---~~~~~~~~~~~~~ 755 (840)
|||+++.... ..........||+.|+|||++.+..++.++||||||+++|||++|+.||+.. .........|...
T Consensus 177 Dfg~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 177 DFGLAKLMDY--KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp CCSSCEECCS--SSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred cCccccccCc--ccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 9999987643 2223344556999999999998888999999999999999999999999631 1222333344332
Q ss_pred hhccccchhhhcccccCC-CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 756 KVDTKEGIMEVLDKKLSG-SFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
.... .......+..... ...+....+.+++.+|++.||++|||+.|++++|++...
T Consensus 255 ~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 255 LLKE-KKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp TTSS-CCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred Hhhc-hhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 2222 2233444444433 336677889999999999999999999999999986433
No 46
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=5.6e-42 Score=367.94 Aligned_cols=261 Identities=26% Similarity=0.342 Sum_probs=207.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeC----CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN----SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
.+|...+.||+|+||.||+|... .+..||||++.... .....+.+.+|+.++++++||||+++++++
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 119 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY---------TERQRRDFLSEASIMGQFDHPNIIRLEGVV 119 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC---------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC---------CHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 56788899999999999999764 34569999985332 123456789999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
.+....++||||+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 120 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg 196 (325)
T 3kul_A 120 TRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFG 196 (325)
T ss_dssp CGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCS
T ss_pred EeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCC
Confidence 99999999999999999999998766679999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
+++................+|+.|+|||++.+..++.++||||||+++|||++ |+.||..... .....
T Consensus 197 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~--------- 265 (325)
T 3kul_A 197 LSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVIS--------- 265 (325)
T ss_dssp SCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HHHHH---------
T ss_pred cccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--HHHHH---------
Confidence 99876543223333344556789999999998899999999999999999999 9999965311 11100
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCC
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPC 813 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 813 (840)
.+......+........+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 266 ----~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~ 314 (325)
T 3kul_A 266 ----SVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS 314 (325)
T ss_dssp ----HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ----HHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence 0001111111122335677788899999999999999999999986543
No 47
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.2e-41 Score=364.68 Aligned_cols=250 Identities=23% Similarity=0.318 Sum_probs=204.5
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
.+|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+++++.++||||+++++++.+.
T Consensus 15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 86 (328)
T 3fe3_A 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL--------NPTSLQKLFREVRIMKILNHPNIVKLFEVIETE 86 (328)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC--------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 4688889999999999999965 6899999999854321 123356788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 162 (328)
T 3fe3_A 87 KTLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSN 162 (328)
T ss_dssp SEEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCG
T ss_pred CEEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCce
Confidence 99999999999999999997764 68999999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCC-ccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKAT-TKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
.... ........||+.|+|||++.+..++ .++||||+||++|||++|+.||.+.. ............
T Consensus 163 ~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~--- 230 (328)
T 3fe3_A 163 EFTV----GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRERVLRGK--- 230 (328)
T ss_dssp GGSS----SCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCC---
T ss_pred ecCC----CCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCC---
Confidence 7643 2234556799999999999887765 89999999999999999999997531 111111100000
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
...+.. ....+.+++.+|++.||.+|||++|++++-
T Consensus 231 -----~~~p~~---~s~~~~~li~~~L~~dP~~R~t~~eil~h~ 266 (328)
T 3fe3_A 231 -----YRIPFY---MSTDCENLLKRFLVLNPIKRGTLEQIMKDR 266 (328)
T ss_dssp -----CCCCTT---SCHHHHHHHHHHCCSSTTTSCCHHHHTTCT
T ss_pred -----CCCCCC---CCHHHHHHHHHHCCCChhHCcCHHHHhcCH
Confidence 011111 234566788899999999999999999874
No 48
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-41 Score=355.54 Aligned_cols=255 Identities=25% Similarity=0.343 Sum_probs=207.8
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|+..+.||+|+||.||+|...+++.||||++..... ..+.+.+|++++++++||||+++++++.+..
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 78 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA 78 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-----------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-----------CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 46788899999999999999988899999999854321 1356889999999999999999999999999
Q ss_pred cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhh
Q 003199 606 CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKV 685 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 685 (840)
..++||||+++++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~ 155 (269)
T 4hcu_A 79 PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRF 155 (269)
T ss_dssp SEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGG
T ss_pred ceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccc
Confidence 9999999999999999998776679999999999999999999999 9999999999999999999999999999986
Q ss_pred hhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 686 LQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 686 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
.... .........+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||..... . ...... .
T Consensus 156 ~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--~---~~~~~~-------~ 221 (269)
T 4hcu_A 156 VLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--S---EVVEDI-------S 221 (269)
T ss_dssp BCCH--HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--H---HHHHHH-------H
T ss_pred cccc--ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--H---HHHHHH-------h
Confidence 5321 1112234456788999999998899999999999999999999 9999975311 1 000000 0
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
.......+.. ....+.+++.+|++.||++|||+.+++++|+++.
T Consensus 222 ~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~ 265 (269)
T 4hcu_A 222 TGFRLYKPRL---ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265 (269)
T ss_dssp TTCCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCccCCCCCc---CCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence 0001111111 2345677888999999999999999999998764
No 49
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=8.9e-42 Score=372.95 Aligned_cols=260 Identities=27% Similarity=0.355 Sum_probs=197.3
Q ss_pred HhcCccCeeeccCCcEEEEEEeC----CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN----SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
.+|...+.||+|+||.||+|... ++..||||++.... .....+.+.+|+.++++++||||+++++++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 115 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY---------TEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC---------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc---------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 46888899999999999999764 57789999984322 123456799999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
.+....++||||+++|+|.+++......+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg 192 (373)
T 2qol_A 116 TKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFG 192 (373)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred eeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCc
Confidence 99999999999999999999998876679999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
+++................+++.|+|||++.+..++.++||||||+++|||++ |+.||.... ..... ..
T Consensus 193 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~--~~~~~---~~----- 262 (373)
T 2qol_A 193 LGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS--NQDVI---KA----- 262 (373)
T ss_dssp ---------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC--HHHHH---HH-----
T ss_pred cccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHHHH---HH-----
Confidence 99876543222222233446788999999999999999999999999999998 999996531 11110 00
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
+......+........+.+++.+||+.||++||++.++++.|+++..
T Consensus 263 -----i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~ 309 (373)
T 2qol_A 263 -----VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309 (373)
T ss_dssp -----HHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----HHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHh
Confidence 00000111112234567788889999999999999999999987643
No 50
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.2e-41 Score=369.59 Aligned_cols=257 Identities=25% Similarity=0.347 Sum_probs=206.1
Q ss_pred HhcCccCeeeccCCcEEEEEEe--------CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcce
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL--------NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVK 596 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 596 (840)
++|...+.||+|+||.||+|.. .++..||||++.... .....+.+.+|+++++++ +||||++
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~~hpnIv~ 151 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---------TEKDLSDLVSEMEMMKMIGKHKNIIN 151 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC---------BHHHHHHHHHHHHHHHHSCCCTTBCC
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc---------CHHHHHHHHHHHHHHHHhcCCCCEee
Confidence 5678889999999999999965 245679999985332 123456789999999999 8999999
Q ss_pred eeeEEecCccceEEEeecCCCChHHHhhcCC---------------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 003199 597 LYCYFSSLYCNLLVYEYMPNGNLWDALHKGL---------------VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRD 661 (840)
Q Consensus 597 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 661 (840)
+++++.+....++||||+++|+|.+++.... ..+++.++..++.||+.||+|||+ ++|+|||
T Consensus 152 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrD 228 (370)
T 2psq_A 152 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRD 228 (370)
T ss_dssp EEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred EEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccc
Confidence 9999999999999999999999999997643 247899999999999999999999 9999999
Q ss_pred CCCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 003199 662 IKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVE 740 (840)
Q Consensus 662 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~ 740 (840)
|||+|||++.++.+||+|||+++...... .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 229 lkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~ 307 (370)
T 2psq_A 229 LAARNVLVTENNVMKIADFGLARDINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 307 (370)
T ss_dssp CCGGGEEECTTCCEEECCCSSCEETTCCC-TTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred cchhhEEECCCCCEEEccccCCcccCccc-ceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999999998664321 1122334567889999999999999999999999999999999 999997
Q ss_pred CCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 741 DDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
+.. ....... +...............+.+++.+||+.||++||++.|++++|+++
T Consensus 308 ~~~--~~~~~~~-------------~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 308 GIP--VEELFKL-------------LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp TCC--GGGHHHH-------------HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC--HHHHHHH-------------HhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 531 1111100 000001111112334577788899999999999999999999875
No 51
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.8e-41 Score=354.18 Aligned_cols=257 Identities=23% Similarity=0.335 Sum_probs=208.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|+..+.||+|+||.||+|..+++..||||++..... ..+.+.+|++++++++||||+++++++.+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 76 (268)
T 3sxs_A 8 EEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-----------SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY 76 (268)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-----------cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 56788899999999999999999888999999854321 1356889999999999999999999999999
Q ss_pred cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhh
Q 003199 606 CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKV 685 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 685 (840)
..++||||+++++|.+++......+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 153 (268)
T 3sxs_A 77 PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRY 153 (268)
T ss_dssp SEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEE
T ss_pred ceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCcccee
Confidence 9999999999999999998765569999999999999999999999 9999999999999999999999999999976
Q ss_pred hhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 686 LQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 686 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
... ..........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ... .....
T Consensus 154 ~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~--~~~~~-------- 219 (268)
T 3sxs_A 154 VLD--DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN--SEV--VLKVS-------- 219 (268)
T ss_dssp CCT--TCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH--HHH--HHHHH--------
T ss_pred cch--hhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh--HHH--HHHHH--------
Confidence 543 12222334456778999999988889999999999999999999 9999975311 000 00000
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCC
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPC 813 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 813 (840)
.......+.. ....+.+++.+|++.||++|||+.|++++|+.+...
T Consensus 220 ~~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 220 QGHRLYRPHL---ASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp TTCCCCCCTT---SCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred cCCCCCCCCc---ChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 0000011111 224567788899999999999999999999988653
No 52
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.8e-41 Score=358.83 Aligned_cols=261 Identities=25% Similarity=0.392 Sum_probs=209.0
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|...+.||+|+||+||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~----------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 79 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFD----------EETQRTFLKEVKVMRCLEHPNVLKFIGVLYKD 79 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCC----------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCC----------HHHHHHHHHHHHHHHhCCCcCcccEEEEEecC
Confidence 4677889999999999999966 478999999884321 34457789999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++|+|.+++......+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 156 (310)
T 3s95_A 80 KRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLAR 156 (310)
T ss_dssp TEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCE
T ss_pred CeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccce
Confidence 99999999999999999998866689999999999999999999999 999999999999999999999999999997
Q ss_pred hhhccCCCC-----------cceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 003199 685 VLQARGGKD-----------STTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWV 753 (840)
Q Consensus 685 ~~~~~~~~~-----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 753 (840)
......... .......||+.|+|||++.+..++.++||||||+++|||++|..|+.............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~- 235 (310)
T 3s95_A 157 LMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN- 235 (310)
T ss_dssp ECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC-
T ss_pred ecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh-
Confidence 764321111 11124679999999999999999999999999999999999999987532221111100
Q ss_pred hhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 754 SIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
.....+...+... ...+.+++.+||+.||++|||+.++++.|+++..
T Consensus 236 ---------~~~~~~~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~ 282 (310)
T 3s95_A 236 ---------VRGFLDRYCPPNC---PPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282 (310)
T ss_dssp ---------HHHHHHHTCCTTC---CTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---------hhccccccCCCCC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111111111111 2346678889999999999999999999987653
No 53
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.2e-41 Score=360.41 Aligned_cols=259 Identities=32% Similarity=0.450 Sum_probs=199.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
.+|+..+.||+|+||+||+|... |+.||||++..... .....+.+.+|++++++++||||+++++++.+..
T Consensus 37 ~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 3p86_A 37 CDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDF--------HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP 107 (309)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCC--------SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred hHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCC--------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence 56888899999999999999774 89999999854321 1233567889999999999999999999999999
Q ss_pred cceEEEeecCCCChHHHhhcCC--CCCChHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCCEEEcCCCCCeeeccc
Q 003199 606 CNLLVYEYMPNGNLWDALHKGL--VHLDWPTRHKIAFGVAQGLAYLHHGLLSP--IIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||
T Consensus 108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg 184 (309)
T 3p86_A 108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFG 184 (309)
T ss_dssp CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC
T ss_pred ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCC
Confidence 9999999999999999998753 238999999999999999999999 88 9999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
+++.... .........||+.|+|||++.+..++.++||||||+++|||++|+.||..... ........ ..
T Consensus 185 ~a~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~--~~~~~~~~--~~--- 254 (309)
T 3p86_A 185 LSRLKAS---TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP--AQVVAAVG--FK--- 254 (309)
T ss_dssp --------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH--HHHHHHHH--HS---
T ss_pred CCccccc---cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH--hc---
Confidence 9976432 12223456799999999999999999999999999999999999999975311 11110000 00
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCC
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPC 813 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 813 (840)
......+.. ....+.+++.+||+.||++|||+.++++.|+.+...
T Consensus 255 ----~~~~~~~~~---~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 255 ----CKRLEIPRN---LNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp ----CCCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred ----CCCCCCCcc---CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 001111222 234567788899999999999999999999877554
No 54
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2e-41 Score=358.92 Aligned_cols=252 Identities=25% Similarity=0.351 Sum_probs=204.2
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||+||+|.. .+|+.||||++..... ...+.+.+|+.+++.++||||+++++++..
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 88 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ----------PKKELIINEILVMRENKNPNIVNYLDSYLV 88 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC----------SCHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc----------cHHHHHHHHHHHHhcCCCCCCCeEeEEEEE
Confidence 35788899999999999999964 5799999999854321 123568899999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
.+..++||||+++|+|.+++... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++
T Consensus 89 ~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 89 GDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp TTEEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCEEEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 99999999999999999999875 58999999999999999999999 99999999999999999999999999998
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
..... .........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ............
T Consensus 164 ~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~~~~~~~--- 233 (297)
T 3fxz_A 164 AQITP---EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP----LRALYLIATNGT--- 233 (297)
T ss_dssp EECCS---TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHHHHHHCS---
T ss_pred eecCC---cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCC---
Confidence 76543 22233456799999999999999999999999999999999999999975311 100000000000
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.. ..........+.+++.+||+.||++|||+.|++++-
T Consensus 234 -----~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~ 271 (297)
T 3fxz_A 234 -----PE-LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQ 271 (297)
T ss_dssp -----CC-CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCG
T ss_pred -----CC-CCCccccCHHHHHHHHHHccCChhHCcCHHHHhhCh
Confidence 00 001122334567788899999999999999999863
No 55
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.1e-42 Score=368.00 Aligned_cols=254 Identities=25% Similarity=0.370 Sum_probs=197.1
Q ss_pred HHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
+.++|...+.||+|+||+||+|.. .+|+.||||++...... .....+.+|+++++.++||||+++++++.
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~---------~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~ 78 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG---------SDLPRIKTEIEALKNLRHQHICQLYHVLE 78 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------------CCHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc---------hHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence 456788899999999999999965 58999999998544321 11345789999999999999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccc
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGI 682 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 682 (840)
+....++||||+++|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 79 ~~~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~ 154 (347)
T 3zgw_A 79 TANKIFMVLEYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGL 154 (347)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccC
Confidence 9999999999999999999997654 69999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhccCCCCcceecccccccccCccccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 683 AKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKA-TTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 683 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
+..... ..........||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+.. ............
T Consensus 155 a~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~- 226 (347)
T 3zgw_A 155 CAKPKG--NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-----VMALYKKIMRGK- 226 (347)
T ss_dssp CBC----------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTC-
T ss_pred cccccC--CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCC-
Confidence 876533 12223345679999999999988775 899999999999999999999997531 111111111100
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
...+... ...+.+++.+|++.||++|||++|++++-.
T Consensus 227 -------~~~p~~~---s~~~~~li~~~L~~dP~~Rps~~eil~hp~ 263 (347)
T 3zgw_A 227 -------YDVPKWL---SPSSILLLQQMLQVDPKKRISMKNLLNHPW 263 (347)
T ss_dssp -------CCCCTTC---CHHHHHHHHHHTCSSGGGSCCHHHHHTCHH
T ss_pred -------CCCCCCC---CHHHHHHHHHHcccCHhHCcCHHHHhcCcc
Confidence 0112222 244567888999999999999999998744
No 56
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.3e-40 Score=353.17 Aligned_cols=280 Identities=35% Similarity=0.544 Sum_probs=222.8
Q ss_pred hHHHHHHhcCcc------CeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCC
Q 003199 520 DQREILEAMTEK------NKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKN 593 (840)
Q Consensus 520 ~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n 593 (840)
+...++..|... +.||+|+||.||+|.. +++.||||++...... ......+.+.+|+.++++++|||
T Consensus 19 ~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 19 ELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI------TTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp HHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTS------CTTTHHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCc------chHHHHHHHHHHHHHHHhcCCCC
Confidence 344555666655 8999999999999987 4899999998543211 11234567899999999999999
Q ss_pred cceeeeEEecCccceEEEeecCCCChHHHhhcC--CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC
Q 003199 594 IVKLYCYFSSLYCNLLVYEYMPNGNLWDALHKG--LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV 671 (840)
Q Consensus 594 iv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 671 (840)
|+++++++.+....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcC
Confidence 999999999999999999999999999998743 3468999999999999999999999 99999999999999999
Q ss_pred CCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhh
Q 003199 672 NYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIY 751 (840)
Q Consensus 672 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 751 (840)
++.+||+|||+++..... ..........||+.|+|||.+.+ .++.++||||||+++|||++|+.||..... ......
T Consensus 169 ~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-~~~~~~ 245 (307)
T 2nru_A 169 AFTAKISDFGLARASEKF-AQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHRE-PQLLLD 245 (307)
T ss_dssp TCCEEECCCTTCEECCSC-SSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBS-SSBTTH
T ss_pred CCcEEEeecccccccccc-cccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcc-hHHHHH
Confidence 999999999999765331 11222334579999999998765 588999999999999999999999976432 222222
Q ss_pred hhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 752 WVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 752 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
+..........+...+++............+.+++.+||+.||.+|||+.+++++|+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2222222233344556666666667778889999999999999999999999999998753
No 57
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.3e-41 Score=362.89 Aligned_cols=268 Identities=27% Similarity=0.321 Sum_probs=204.4
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
.+|+..+.||+|+||+||+|... ++.||||++.... .....+.+|+.++++++||||+++++++....
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-----------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 91 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-----------KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-----------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-----------hHHHHHHHHHHHHhcCCCCCchhhcceeccCC
Confidence 46788899999999999999876 8999999984321 22344566999999999999999999997754
Q ss_pred c----ceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCC----------CeEecCCCCCCEEEcC
Q 003199 606 C----NLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLS----------PIIHRDIKSTNILLDV 671 (840)
Q Consensus 606 ~----~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~----------~ivH~Dlk~~Nill~~ 671 (840)
. .++||||+++|+|.+++... .++|..+..++.|++.||+|||+ . +|+||||||+||+++.
T Consensus 92 ~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~ 166 (322)
T 3soc_A 92 SVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKN 166 (322)
T ss_dssp SSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECT
T ss_pred CCCceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECC
Confidence 3 59999999999999999875 58999999999999999999998 7 9999999999999999
Q ss_pred CCCCeeecccchhhhhccCCCCcceecccccccccCcccccc-----CCCCccccchhHHHHHHHHHhCCCCCCCCCCCC
Q 003199 672 NYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS-----SKATTKCDVYSFGVVLMELITGRKPVEDDFGDN 746 (840)
Q Consensus 672 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~ 746 (840)
++.+||+|||+++...... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......
T Consensus 167 ~~~~kL~DFg~a~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~ 245 (322)
T 3soc_A 167 NLTACIADFGLALKFEAGK-SAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEY 245 (322)
T ss_dssp TCCEEECCCTTCEEECTTS-CCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCC
T ss_pred CCeEEEccCCccccccccc-CccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchh
Confidence 9999999999997764321 1222334679999999999876 355678999999999999999999997643322
Q ss_pred cchhhhhhhhhccccchhh-hccccc----CCCc--HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 747 KNIIYWVSIKVDTKEGIME-VLDKKL----SGSF--RDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 747 ~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~--~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
................... ...... ...+ ......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 246 MLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp CCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111000000000000111 111111 1111 234566889999999999999999999999998764
No 58
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.6e-40 Score=385.01 Aligned_cols=400 Identities=19% Similarity=0.237 Sum_probs=324.5
Q ss_pred ccccccccCCC-CCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccc
Q 003199 2 SFMYLTGTLPD-FSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCAL 80 (840)
Q Consensus 2 ~~~~~~~~~~~-~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l 80 (840)
+.+.+++ +|. +. ++|++|+|++|.|++..|..|.++++|++|+|++| .+..+++..|.++++|++|+|++|.+
T Consensus 39 s~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N---~l~~~~~~~~~~l~~L~~L~Ls~N~l 112 (562)
T 3a79_B 39 SNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHN---RIRSLDFHVFLFNQDLEYLDVSHNRL 112 (562)
T ss_dssp TTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSC---CCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCC---CCCcCCHHHhCCCCCCCEEECCCCcC
Confidence 4456675 454 43 89999999999999888889999999999999999 77888888999999999999999999
Q ss_pred cccCCccccCCCCCcEEEccCCccccc-CchhhhcCCCCCeeecccCccccccCCcccCCCCCC--CeeeccCCcc--cc
Q 003199 81 HGQIPASIGNVTSLTDLELTGNFITGH-IPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTEL--TDLDMSVNHL--SG 155 (840)
Q Consensus 81 ~~~~~~~~~~l~~L~~L~L~~n~i~~~-~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L--~~L~L~~n~l--~~ 155 (840)
+ .+|.. .+++|++|+|++|++++. .|..|.++++|++|+|++|++ .. ..+..+++| ++|+|++|.+ ++
T Consensus 113 ~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l-~~---~~~~~l~~L~L~~L~L~~n~l~~~~ 185 (562)
T 3a79_B 113 Q-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKF-RQ---LDLLPVAHLHLSCILLDLVSYHIKG 185 (562)
T ss_dssp C-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBC-CT---TTTGGGTTSCEEEEEEEESSCCCCS
T ss_pred C-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcc-cc---CchhhhhhceeeEEEeecccccccc
Confidence 8 45655 799999999999999963 468999999999999999983 32 245555666 9999999999 66
Q ss_pred cCCccccC--------------------------CCCCcEEEeeccc----------------------------cccc-
Q 003199 156 KIPESILR--------------------------LPKLRVLQLYNNS----------------------------LSGE- 180 (840)
Q Consensus 156 ~~~~~~~~--------------------------l~~L~~L~L~~N~----------------------------l~~~- 180 (840)
..|..+.. +++|+.|++++|+ +.+.
T Consensus 186 ~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~ 265 (562)
T 3a79_B 186 GETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKC 265 (562)
T ss_dssp SSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHH
T ss_pred cCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHH
Confidence 66665554 4466677777663 1110
Q ss_pred ---cchhhhcCCCCCEEEccCCcCcccCCcCC-----CCCCCcceeccccccccccCC-ccccC---CCCchhhhccccc
Q 003199 181 ---ISSVIANSTTLTMLSLYDNSLTGEVPQDL-----GQWSPLVVLDLSENKLSGPLP-AKVCS---RGKLQYFLVLQNM 248 (840)
Q Consensus 181 ---~~~~~~~l~~L~~L~L~~N~l~~~~~~~l-----~~l~~L~~L~L~~N~l~~~~~-~~~~~---l~~L~~L~l~~n~ 248 (840)
.+. ....++|++|++++|++++.+|..+ ..++.|+.++++.|.+ .+| ..+.. ..+|+.|++++|.
T Consensus 266 ~~~~~~-~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~ 342 (562)
T 3a79_B 266 SVKLFQ-FFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTP 342 (562)
T ss_dssp HHHHHH-HHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSC
T ss_pred HHHHHH-hhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhhhhhccCcceEEEccCCC
Confidence 011 1123489999999999998888877 7788888888888877 334 23322 3679999999998
Q ss_pred ccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccC--CcccCCCCCCceeecccceeeeccc
Q 003199 249 FSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPI--ANTVGNARNLSELFMQRNQISGFIP 326 (840)
Q Consensus 249 ~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p 326 (840)
+.... ....+++|++|++++|++++..|..+..+++|+.|++++|++++.. +..++.+++|++|+|++|++++.+|
T Consensus 343 ~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 420 (562)
T 3a79_B 343 FIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAY 420 (562)
T ss_dssp CCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCS
T ss_pred ccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccC
Confidence 86432 1267899999999999999889999999999999999999999743 4678999999999999999998455
Q ss_pred h-hhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCch-hhcc
Q 003199 327 S-EIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPES-LCEL 404 (840)
Q Consensus 327 ~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~-~~~~ 404 (840)
. .+..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|+ .+|.. +..+
T Consensus 421 ~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l 496 (562)
T 3a79_B 421 DRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRL 496 (562)
T ss_dssp SCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTC
T ss_pred hhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcC
Confidence 4 577889999999999999987777664 78999999999998 67776779999999999999999 56765 6665
Q ss_pred -CCCeEEccCCCCcCcCCcc
Q 003199 405 -LPNSINFSNNRLSGPIPLS 423 (840)
Q Consensus 405 -~~~~l~l~~N~l~~~~p~~ 423 (840)
.++.+++++|++.|.+|..
T Consensus 497 ~~L~~L~l~~N~~~c~c~~~ 516 (562)
T 3a79_B 497 TSLQYIWLHDNPWDCTCPGI 516 (562)
T ss_dssp TTCCCEECCSCCBCCCHHHH
T ss_pred CCCCEEEecCCCcCCCcchH
Confidence 5688999999999998853
No 59
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.4e-39 Score=384.04 Aligned_cols=415 Identities=20% Similarity=0.187 Sum_probs=320.9
Q ss_pred CCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEE
Q 003199 19 LRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLE 98 (840)
Q Consensus 19 L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 98 (840)
-++.+-++.+++ .+|..+. +++++|+|++| .|+.+++..|.++++|++|+|++|.|+++.|++|.++++|++|+
T Consensus 33 ~~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N---~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~ 106 (635)
T 4g8a_A 33 NITYQCMELNFY-KIPDNLP--FSTKNLDLSFN---PLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLI 106 (635)
T ss_dssp TTEEECTTSCCS-SCCSSSC--TTCCEEECTTS---CCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCEEECCCCCcC-ccCCCCC--cCCCEEEeeCC---CCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEE
Confidence 356788888898 7887553 48999999999 78889999999999999999999999998899999999999999
Q ss_pred ccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCccccc-CCccccCCCCCcEEEeecccc
Q 003199 99 LTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGK-IPESILRLPKLRVLQLYNNSL 177 (840)
Q Consensus 99 L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l 177 (840)
|++|+|++..+..|.++++|++|+|++|+ +.+..+..|+++++|++|+|++|.+++. .|..+..+++|++|+|++|+|
T Consensus 107 Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~-l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 107 LTGNPIQSLALGAFSGLSSLQKLVAVETN-LASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp CTTCCCCEECGGGGTTCTTCCEEECTTSC-CCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred ccCCcCCCCCHHHhcCCCCCCEEECCCCc-CCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc
Confidence 99999998778899999999999999998 4555556799999999999999999864 578889999999999999999
Q ss_pred ccccchhhhcCCCCC----EEEccCCcCcccCCcCCCCC-----------------------------------------
Q 003199 178 SGEISSVIANSTTLT----MLSLYDNSLTGEVPQDLGQW----------------------------------------- 212 (840)
Q Consensus 178 ~~~~~~~~~~l~~L~----~L~L~~N~l~~~~~~~l~~l----------------------------------------- 212 (840)
++..+..|..+.+++ .++++.|.+..+.+..+...
T Consensus 186 ~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~ 265 (635)
T 4g8a_A 186 QSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEG 265 (635)
T ss_dssp CEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSC
T ss_pred cccccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCccccccccccccccccc
Confidence 988888887665443 67777777764333222211
Q ss_pred --------------------------------------------------------------CCcceeccccccccccCC
Q 003199 213 --------------------------------------------------------------SPLVVLDLSENKLSGPLP 230 (840)
Q Consensus 213 --------------------------------------------------------------~~L~~L~L~~N~l~~~~~ 230 (840)
..|+.|++.+|.+....+
T Consensus 266 ~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~ 345 (635)
T 4g8a_A 266 NLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPT 345 (635)
T ss_dssp CCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCC
T ss_pred ccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCc
Confidence 122222333332221111
Q ss_pred cc-------------------ccCCCCchhhhcccccccc--cCCcccccccCCceEEeeCceeeccCCccccCCCcccE
Q 003199 231 AK-------------------VCSRGKLQYFLVLQNMFSG--VLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSI 289 (840)
Q Consensus 231 ~~-------------------~~~l~~L~~L~l~~n~~~~--~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 289 (840)
.. ...+++|+.++++.|.+.. ..+..+..+.+|+.+++..|.+. ..+..+..+++|+.
T Consensus 346 ~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~ 424 (635)
T 4g8a_A 346 LKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEH 424 (635)
T ss_dssp CBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCE
T ss_pred ccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccc-cccccccccccccc
Confidence 10 1122333344444443321 12223333444445555555444 33455667788888
Q ss_pred EeccCCcccccCC-cccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCcc-CCCCCCcccCccccchhcccCC
Q 003199 290 IDLSYNSFSGPIA-NTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLL-SGPIPSGIGNLKKLNLLMLQSN 367 (840)
Q Consensus 290 L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N 367 (840)
++++.|......+ ..|..+++++.++++.|.+.+..+..+..++.|+.|+|++|.+ .+..|..|..+++|+.|+|++|
T Consensus 425 l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N 504 (635)
T 4g8a_A 425 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 504 (635)
T ss_dssp EECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred hhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCC
Confidence 8888777665443 5678899999999999999999999999999999999999985 4468889999999999999999
Q ss_pred ccCCCcchhcccccCCCEEECcCccccccCCchhhcc-CCCeEEccCCCCcCcCCcccccC---CCcccccCCCCCcc
Q 003199 368 KLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCEL-LPNSINFSNNRLSGPIPLSLIKE---GLVESFSGNPGLCV 441 (840)
Q Consensus 368 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~~~l~l~~N~l~~~~p~~~~~~---~~~~~~~~n~~~c~ 441 (840)
+|++.+|.+|.++++|++|+|++|+|++..|..+..+ .++.|++++|++++..|..+... .....+.+|||.|.
T Consensus 505 ~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 505 QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred ccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 9999999999999999999999999998888888877 67999999999999999876543 34578999999994
No 60
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.7e-40 Score=351.25 Aligned_cols=270 Identities=27% Similarity=0.349 Sum_probs=208.6
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||.||+|.. .+++.||+|++...... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~ 83 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPRE-------KEETLKRFEREVHNSSQLSHQNIVSMIDVDEED 83 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSC-------CHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECS
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccc-------cHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeC
Confidence 4688889999999999999964 47899999998543321 234457789999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++++|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 84 ~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~ 159 (294)
T 4eqm_A 84 DCYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAK 159 (294)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSST
T ss_pred CeEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCcc
Confidence 99999999999999999998764 68999999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
..... .........||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... .............
T Consensus 160 ~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~----~~~~~~~~~~~~~--- 230 (294)
T 4eqm_A 160 ALSET--SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA----VSIAIKHIQDSVP--- 230 (294)
T ss_dssp TC---------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH----HHHHHHHHSSCCC---
T ss_pred ccccc--cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHhhccCC---
Confidence 76431 22233446799999999999999999999999999999999999999975311 0000000000000
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhhcCCCCCCCCC
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRP-TMNEVVQLLAEADPCRFESCK 819 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~evl~~L~~~~~~~~~~~~ 819 (840)
........ +....+.+++.+|++.||++|| +++++.+.|+.+........+
T Consensus 231 -~~~~~~~~---~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~~ 282 (294)
T 4eqm_A 231 -NVTTDVRK---DIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRANED 282 (294)
T ss_dssp -CHHHHSCT---TSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTCC
T ss_pred -Ccchhccc---CCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccCCcc
Confidence 00001111 1234567788899999999998 999999999887655544433
No 61
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.4e-41 Score=354.25 Aligned_cols=254 Identities=22% Similarity=0.307 Sum_probs=204.0
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|+..+.||+|+||.||+|...++..||||++..... ..+.+.+|++++++++||||+++++++.+..
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 92 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-----------SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR 92 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-----------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred HHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-----------CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC
Confidence 56788899999999999999999888999999854321 1356889999999999999999999999999
Q ss_pred cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhh
Q 003199 606 CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKV 685 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 685 (840)
..++||||+++++|.+++......+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 169 (283)
T 3gen_A 93 PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRY 169 (283)
T ss_dssp SEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGG
T ss_pred CeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEcccccccc
Confidence 9999999999999999998755579999999999999999999999 9999999999999999999999999999986
Q ss_pred hhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 686 LQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 686 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
.... .........+|+.|+|||.+.+..++.++||||+|+++|||++ |+.||..... ... ... +.
T Consensus 170 ~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~--~~~---~~~-------~~ 235 (283)
T 3gen_A 170 VLDD--EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN--SET---AEH-------IA 235 (283)
T ss_dssp BCCH--HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHH---HHH-------HH
T ss_pred cccc--ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh--hHH---HHH-------Hh
Confidence 5321 1112233456788999999998899999999999999999998 9999975311 000 000 00
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
........... ...+.+++.+||+.||++|||+++++++|.++
T Consensus 236 ~~~~~~~~~~~---~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~ 278 (283)
T 3gen_A 236 QGLRLYRPHLA---SEKVYTIMYSCWHEKADERPTFKILLSNILDV 278 (283)
T ss_dssp TTCCCCCCTTC---CHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCCCCCcC---CHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 00111111111 34567788899999999999999999999865
No 62
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.6e-41 Score=372.25 Aligned_cols=258 Identities=23% Similarity=0.299 Sum_probs=205.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|...+.||+|+||.||+|... +++.||||++.... .....+.+.+|++++++++||||+++++++...
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 184 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL---------PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK 184 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS---------CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC---------CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecC
Confidence 46778899999999999999776 78999999985321 123345688999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++|+|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 185 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~ 261 (377)
T 3cbl_A 185 QPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSR 261 (377)
T ss_dssp SSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred CCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCce
Confidence 99999999999999999998765578999999999999999999999 999999999999999999999999999997
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
..... ..........+++.|+|||.+.+..++.++|||||||++|||++ |+.||..... ....... ..
T Consensus 262 ~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--~~~~~~~----~~---- 330 (377)
T 3cbl_A 262 EEADG-VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--QQTREFV----EK---- 330 (377)
T ss_dssp ECTTS-EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--HHHHHHH----HT----
T ss_pred ecCCC-ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----Hc----
Confidence 54221 00111122345778999999988899999999999999999998 9999975311 1110000 00
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
......+. .....+.+++.+||+.||++|||+.++++.|+++.
T Consensus 331 --~~~~~~~~---~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 331 --GGRLPCPE---LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp --TCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --CCCCCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 00001111 12345677888999999999999999999998764
No 63
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=8.7e-41 Score=356.45 Aligned_cols=271 Identities=24% Similarity=0.342 Sum_probs=205.2
Q ss_pred HHhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
.++|+..+.||+|+||+||+|...+|+.||||++..... .....+.+.+|++++++++||||+++++++.+.
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 91 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--------DEGIPSTAIREISLLKELHHPNIVSLIDVIHSE 91 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--------------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc--------cchhhHHHHHHHHHHHHcCCCCEeeeeeEEccC
Confidence 467888999999999999999888899999999854321 122346788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||++ |+|.+.+......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 92 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 167 (311)
T 3niz_A 92 RCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLAR 167 (311)
T ss_dssp SCEEEEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred CEEEEEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCce
Confidence 99999999997 58888888776679999999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh-ccccc
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV-DTKEG 762 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~ 762 (840)
.... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ ......... .....
T Consensus 168 ~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~ 243 (311)
T 3niz_A 168 AFGI---PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ-LPKIFSILGTPNPRE 243 (311)
T ss_dssp ETTS---CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTH-HHHHHHHHCCCCTTT
T ss_pred ecCC---CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHHCCCChHH
Confidence 7632 2223344578999999999876 5689999999999999999999999976432221 111111000 00000
Q ss_pred hhhh------cc---cccCCC-----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhhcC
Q 003199 763 IMEV------LD---KKLSGS-----FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL--LAEAD 811 (840)
Q Consensus 763 ~~~~------~~---~~~~~~-----~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~--L~~~~ 811 (840)
.... .. ...... ......++.+++.+|++.||++|||++|++++ +++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 244 WPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp SGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred hhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 0000 00 000000 01123467788899999999999999999985 44443
No 64
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.6e-41 Score=359.75 Aligned_cols=270 Identities=26% Similarity=0.325 Sum_probs=203.0
Q ss_pred HhcCccCeeeccCCcEEEEEEe-----CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-----NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
++|+..+.||+|+||+||+|.+ .+++.||||++.... ....+.+.+|++++++++||||++++++
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 79 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----------EEHLRDFEREIEILKSLQHDNIVKYKGV 79 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC----------HHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC----------HHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 5678889999999999999974 368999999985322 2335678999999999999999999999
Q ss_pred Eec--CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeee
Q 003199 601 FSS--LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVA 678 (840)
Q Consensus 601 ~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 678 (840)
+.. ....++||||+++|+|.+++......+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 80 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~ 156 (295)
T 3ugc_A 80 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIG 156 (295)
T ss_dssp ECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEEC
T ss_pred EecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEc
Confidence 855 345799999999999999998876569999999999999999999999 999999999999999999999999
Q ss_pred cccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
|||+++................++..|+|||.+.+..++.++||||||+++|||++|..|+...... ..........
T Consensus 157 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~---~~~~~~~~~~ 233 (295)
T 3ugc_A 157 DFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE---FMRMIGNDKQ 233 (295)
T ss_dssp CCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHH---HHHHHCTTCC
T ss_pred cCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHH---HHhhhcCccc
Confidence 9999987654322223334456778899999999999999999999999999999999998642100 0000000000
Q ss_pred ----cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 759 ----TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 759 ----~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
..............+........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 234 GQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp THHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 00000001111111112233456778888999999999999999999998763
No 65
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-41 Score=359.32 Aligned_cols=251 Identities=21% Similarity=0.316 Sum_probs=205.6
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|...+.||+|+||.||+|... +|+.||+|.+.... .....+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-----------~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 72 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-----------TDQVLVKKEISILNIARHRNILHLHESFES 72 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-----------HHHHHHHHHHHHHHHSCCTTBCCEEEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-----------ccHHHHHHHHHHHHhCCCCCCCeEeEEEec
Confidence 357888999999999999999654 68999999984321 224568899999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC--CCCCeeeccc
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV--NYQPKVADFG 681 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~--~~~~kl~Dfg 681 (840)
....++||||+++|+|.+++......+++.++..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+|||
T Consensus 73 ~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred CCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 999999999999999999998766679999999999999999999999 99999999999999987 7899999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
+++.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... . ....
T Consensus 150 ~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~---~~~~------- 213 (321)
T 1tki_A 150 QARQLKP----GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN--Q---QIIE------- 213 (321)
T ss_dssp TCEECCT----TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH--H---HHHH-------
T ss_pred CCeECCC----CCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH--H---HHHH-------
Confidence 9987632 2334556799999999999888899999999999999999999999975311 1 1110
Q ss_pred chhhhcccccCC---CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 762 GIMEVLDKKLSG---SFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 762 ~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
.+....... .+.....++.+++.+|+..||++|||+.|++++-.
T Consensus 214 ---~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~ 260 (321)
T 1tki_A 214 ---NIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPW 260 (321)
T ss_dssp ---HHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred ---HHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChh
Confidence 011111100 01122356778888999999999999999999754
No 66
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.1e-40 Score=358.06 Aligned_cols=251 Identities=24% Similarity=0.298 Sum_probs=203.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||+||+|..+ +|+.||||++...... .......+.+|+.+++.++||||+++++++.+.
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~ 77 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVII-------AKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH 77 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-------HTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhh-------hhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC
Confidence 56888899999999999999665 7999999998543210 112345688999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 78 ~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~ 153 (337)
T 1o6l_A 78 DRLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK 153 (337)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred CEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchh
Confidence 99999999999999999998754 68999999999999999999999 999999999999999999999999999997
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
.... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.... . ..........
T Consensus 154 ~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~---~--~~~~~~i~~~----- 220 (337)
T 1o6l_A 154 EGIS---DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD---H--ERLFELILME----- 220 (337)
T ss_dssp CSCC---TTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS---H--HHHHHHHHHC-----
T ss_pred hccc---CCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC---H--HHHHHHHHcC-----
Confidence 5422 1223445679999999999999999999999999999999999999997531 1 1111110000
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRP-----TMNEVVQL 806 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~ 806 (840)
...++..+ ...+.+++.+|++.||++|| ++.|+++|
T Consensus 221 ---~~~~p~~~---s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 221 ---EIRFPRTL---SPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ---CCCCCTTS---CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---CCCCCCCC---CHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 01122222 34566778899999999999 89999887
No 67
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=353.82 Aligned_cols=275 Identities=23% Similarity=0.272 Sum_probs=208.9
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|...+.||+|+||+||+|... +|+.||||++..... ....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 79 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---------LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET 79 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---------GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc---------cchHHHHHHHHHHHHhcCCCCcceEEEEeecC
Confidence 45788899999999999999665 689999999853321 12245678899999999999999999998765
Q ss_pred c--cceEEEeecCCCChHHHhhcCC--CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE----cCCCCCe
Q 003199 605 Y--CNLLVYEYMPNGNLWDALHKGL--VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL----DVNYQPK 676 (840)
Q Consensus 605 ~--~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~k 676 (840)
. ..++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||++ +.++.+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~k 156 (319)
T 4euu_A 80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYK 156 (319)
T ss_dssp TTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEE
T ss_pred CCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEE
Confidence 5 6799999999999999998653 238999999999999999999999 999999999999999 7778899
Q ss_pred eecccchhhhhccCCCCcceecccccccccCccccc--------cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcc
Q 003199 677 VADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAY--------SSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKN 748 (840)
Q Consensus 677 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 748 (840)
|+|||+++.... ........||+.|+|||++. +..++.++|||||||++|||++|+.||.........
T Consensus 157 L~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~ 232 (319)
T 4euu_A 157 LTDFGAARELED----DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232 (319)
T ss_dssp ECCCTTCEECCT----TCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGC
T ss_pred EccCCCceecCC----CCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchh
Confidence 999999987633 22334457999999999875 567899999999999999999999999753322211
Q ss_pred hhhhhhhhhccc-cchhhh---------cccccC---CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCC
Q 003199 749 IIYWVSIKVDTK-EGIMEV---------LDKKLS---GSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRF 815 (840)
Q Consensus 749 ~~~~~~~~~~~~-~~~~~~---------~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 815 (840)
............ ...... .....+ .........+.+++.+|++.||++|||++|++++..+....+.
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~~~ 312 (319)
T 4euu_A 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRGN 312 (319)
T ss_dssp HHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC---
T ss_pred HHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhcCC
Confidence 111111111000 000000 000111 1224566678889999999999999999999999998777665
Q ss_pred C
Q 003199 816 E 816 (840)
Q Consensus 816 ~ 816 (840)
.
T Consensus 313 ~ 313 (319)
T 4euu_A 313 S 313 (319)
T ss_dssp -
T ss_pred c
Confidence 4
No 68
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.1e-40 Score=352.57 Aligned_cols=262 Identities=28% Similarity=0.399 Sum_probs=201.5
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|...+.||+|+||.||+|... ..+|||+++.... .....+.+.+|++++++++||||+++++++.. +
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~ 104 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDP--------TPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-D 104 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSC--------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-S
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCC--------CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-C
Confidence 46778899999999999999765 4699998754321 12345678999999999999999999998754 5
Q ss_pred cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhh
Q 003199 606 CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKV 685 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 685 (840)
..++||||+++++|.+++......+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~ 181 (307)
T 3lb7_A 105 NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATV 181 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC
T ss_pred cEEEEEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCcee
Confidence 5789999999999999998776689999999999999999999999 9999999999999999999999999999976
Q ss_pred hhccCCCCcceecccccccccCccccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 686 LQARGGKDSTTTVIAGTYGYLAPEYAY---SSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 686 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
.... ..........||+.|+|||++. +..++.++||||||+++|||++|+.||...... ...... ..
T Consensus 182 ~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~--~~~~~~---~~---- 251 (307)
T 3lb7_A 182 KSRW-SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR--DQIIFM---VG---- 251 (307)
T ss_dssp -------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH--HHHHHH---HH----
T ss_pred cccc-cccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcH--HHHHHH---Hh----
Confidence 5321 1122334557999999999885 567899999999999999999999999753211 111100 00
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
.....+.+..........+.+++.+||+.||++||++.|++++|+.+..
T Consensus 252 -~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~ 300 (307)
T 3lb7_A 252 -RGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp -HTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHT
T ss_pred -cCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHh
Confidence 0001111111122234567778889999999999999999999987654
No 69
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=368.58 Aligned_cols=258 Identities=21% Similarity=0.271 Sum_probs=206.0
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
.+.++|...+.||+|+||.||+|.. .+|+.||+|++..... .....+.+.+|+++++.++||||+++++++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~--------~~~~~~~~~~E~~il~~l~hpnIv~l~~~~ 79 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL--------SARDHQKLEREARICRLLKHPNIVRLHDSI 79 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC--------HHHHHHHHHHHHHHHHHCCBTTBCCEEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC--------CHHHHHHHHHHHHHHHhCCCcCCCeEEEEE
Confidence 4668899999999999999999954 5799999999854432 123356788999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEc---CCCCCeee
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLD---VNYQPKVA 678 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl~ 678 (840)
.+....++||||+++|+|.+.+.... .+++..+..++.||+.||+|||+ ++|+||||||+||+++ .++.+||+
T Consensus 80 ~~~~~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~ 155 (444)
T 3soa_A 80 SEEGHHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLA 155 (444)
T ss_dssp ECSSEEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEEC
T ss_pred EECCEEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEc
Confidence 99999999999999999999998764 69999999999999999999999 9999999999999998 45789999
Q ss_pred cccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
|||+++.... .........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.. ....+......
T Consensus 156 DFG~a~~~~~---~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~----~~~~~~~i~~~ 228 (444)
T 3soa_A 156 DFGLAIEVEG---EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED----QHRLYQQIKAG 228 (444)
T ss_dssp CCSSCBCCCT---TCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS----HHHHHHHHHHT
T ss_pred cCceeEEecC---CCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc----HHHHHHHHHhC
Confidence 9999976543 2223345679999999999999899999999999999999999999997531 11111111000
Q ss_pred cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 759 TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.. ....+.+......+.+++.+|++.||++|||+.|++++-
T Consensus 229 ~~--------~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 229 AY--------DFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp CC--------CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred CC--------CCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 00 001111222345667788899999999999999999873
No 70
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.2e-40 Score=361.13 Aligned_cols=260 Identities=22% Similarity=0.286 Sum_probs=205.8
Q ss_pred HHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
+.+.|...+.||+|+||.||+|... +|+.||||++.......... ....+.+.+|+.+++.++||||+++++++.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~----~~~~~~~~~E~~il~~l~hpnIv~l~~~~~ 85 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR----GVCREEIEREVSILRQVLHPNIITLHDVYE 85 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSS----SBCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccc----hhHHHHHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 3457888999999999999999654 79999999996554321111 112457889999999999999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCC----CCeee
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNY----QPKVA 678 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~ 678 (840)
+....++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++ .+||+
T Consensus 86 ~~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~ 161 (361)
T 2yab_A 86 NRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLI 161 (361)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTCS-CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEE
Confidence 9999999999999999999997654 69999999999999999999999 9999999999999998876 79999
Q ss_pred cccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
|||+++.... ........||+.|+|||++.+..++.++||||+||++|||++|..||.+... . ........
T Consensus 162 DFG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~--~---~~~~~i~~ 232 (361)
T 2yab_A 162 DFGLAHEIED----GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--Q---ETLANITA 232 (361)
T ss_dssp CCSSCEECCT----TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--H---HHHHHHHT
T ss_pred ecCCceEcCC----CCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH--H---HHHHHHHh
Confidence 9999987633 2233456799999999999988999999999999999999999999975311 0 01000000
Q ss_pred cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 759 TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.... .+... +......+.+++.+|+..||++|||+.|++++-
T Consensus 233 ~~~~----~~~~~---~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp 274 (361)
T 2yab_A 233 VSYD----FDEEF---FSQTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (361)
T ss_dssp TCCC----CCHHH---HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred cCCC----CCchh---ccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCc
Confidence 0000 00000 011234567788899999999999999999763
No 71
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.4e-41 Score=364.83 Aligned_cols=261 Identities=25% Similarity=0.317 Sum_probs=207.4
Q ss_pred HhcCccCeeeccCCcEEEEEEeC------CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN------SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYC 599 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 599 (840)
++|+..+.||+|+||+||+|.+. +++.||||++.... .......+.+|+.++++++||||+++++
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~hpnIv~~~~ 141 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---------SEQDELDFLMEALIISKFNHQNIVRCIG 141 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC---------CHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc---------ChhhHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 56788899999999999999743 46789999984322 1233457889999999999999999999
Q ss_pred EEecCccceEEEeecCCCChHHHhhcCC------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCC
Q 003199 600 YFSSLYCNLLVYEYMPNGNLWDALHKGL------VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNY 673 (840)
Q Consensus 600 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 673 (840)
++.+....++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ ++|+||||||+|||++.++
T Consensus 142 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~ 218 (367)
T 3l9p_A 142 VSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPG 218 (367)
T ss_dssp EECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSS
T ss_pred EEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCC
Confidence 9999999999999999999999997643 358999999999999999999999 9999999999999999554
Q ss_pred ---CCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcch
Q 003199 674 ---QPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNI 749 (840)
Q Consensus 674 ---~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~ 749 (840)
.+||+|||+++...... .........||+.|+|||++.+..++.++|||||||++|||++ |+.||.... ....
T Consensus 219 ~~~~~kL~DFG~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~--~~~~ 295 (367)
T 3l9p_A 219 PGRVAKIGDFGMARDIYRAG-YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--NQEV 295 (367)
T ss_dssp TTCCEEECCCHHHHHHHHHS-SCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHH
T ss_pred CCceEEECCCcccccccccc-ccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHH
Confidence 59999999998765432 2233445678999999999999999999999999999999998 999997531 1111
Q ss_pred hhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCC
Q 003199 750 IYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCR 814 (840)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 814 (840)
... +...............+.+++.+||+.||++|||+.+++++|+.+....
T Consensus 296 ~~~-------------i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~ 347 (367)
T 3l9p_A 296 LEF-------------VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 347 (367)
T ss_dssp HHH-------------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHH-------------HHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhCh
Confidence 100 0000011111122345778888999999999999999999998765443
No 72
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.5e-40 Score=356.28 Aligned_cols=257 Identities=25% Similarity=0.388 Sum_probs=204.7
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||+||+|... +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 76 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---------VDCPENIKKEICINKMLNHENVVKFYGHRRE 76 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------------CHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc---------cchHHHHHHHHHHHHhCCCCCCCeEEEEEec
Confidence 357888999999999999999655 799999999854321 1223567889999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+++|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 77 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a 152 (323)
T 3tki_A 77 GNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLA 152 (323)
T ss_dssp SSEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCeEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeecc
Confidence 999999999999999999997654 68999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKA-TTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
+.+... ..........||+.|+|||++.+..+ +.++|||||||++|||++|+.||............|....
T Consensus 153 ~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~------ 225 (323)
T 3tki_A 153 TVFRYN-NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK------ 225 (323)
T ss_dssp EECEET-TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC------
T ss_pred ceeccC-CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc------
Confidence 765432 12222345679999999999987765 7899999999999999999999976433222222221110
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
............+.+++.+|++.||++|||+.|++++-.
T Consensus 226 -------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~ 264 (323)
T 3tki_A 226 -------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRW 264 (323)
T ss_dssp -------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred -------ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 001111223345677888999999999999999998754
No 73
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2e-40 Score=360.67 Aligned_cols=256 Identities=22% Similarity=0.320 Sum_probs=205.8
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
.+.+.|+..+.||+|+||.||+|.. .+|+.||||++...... ....+.+.+|+.+++.++||||+++++++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--------~~~~~~~~~E~~il~~l~hpnIv~~~~~~ 97 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--------ARDFQKLEREARICRKLQHPNIVRLHDSI 97 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--------HHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCC--------HHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 4567899999999999999999965 47899999998544321 23346788999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCC---CCCeee
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVN---YQPKVA 678 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl~ 678 (840)
.+....++||||+++|+|.+++.... .+++.++..++.||+.||+|||+ ++|+||||||+||+++.+ +.+||+
T Consensus 98 ~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~ 173 (362)
T 2bdw_A 98 QEESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLA 173 (362)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHTTCS-CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEEC
T ss_pred EeCCEEEEEEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEe
Confidence 99999999999999999999997654 68999999999999999999999 999999999999999865 459999
Q ss_pred cccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
|||++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.. ....+......
T Consensus 174 DfG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~----~~~~~~~i~~~ 245 (362)
T 2bdw_A 174 DFGLAIEVND----SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIKAG 245 (362)
T ss_dssp CCTTCBCCTT----CCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHT
T ss_pred ecCcceEecC----CcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC----HHHHHHHHHhC
Confidence 9999976643 222345679999999999999899999999999999999999999997531 11111111000
Q ss_pred cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 759 TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.. ......+......+.+++.+|++.||++||++.|++++
T Consensus 246 ~~--------~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 246 AY--------DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CC--------CCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CC--------CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 00011122234567788889999999999999999876
No 74
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2e-40 Score=359.63 Aligned_cols=263 Identities=25% Similarity=0.353 Sum_probs=208.8
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC------CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceee
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN------SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLY 598 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 598 (840)
.++|...+.||+|+||.||+|... +++.||||++.... .....+.+.+|+.++++++||||++++
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~hp~iv~~~ 116 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA---------SADMQADFQREAALMAEFDNPNIVKLL 116 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC---------CHHHHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc---------CHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 357888899999999999999764 34899999985332 123456789999999999999999999
Q ss_pred eEEecCccceEEEeecCCCChHHHhhcCC-----------------------CCCChHHHHHHHHHHHHHHHHHhhcCCC
Q 003199 599 CYFSSLYCNLLVYEYMPNGNLWDALHKGL-----------------------VHLDWPTRHKIAFGVAQGLAYLHHGLLS 655 (840)
Q Consensus 599 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~ 655 (840)
+++.+....++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ +
T Consensus 117 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~ 193 (343)
T 1luf_A 117 GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---R 193 (343)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---T
T ss_pred EEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---C
Confidence 99999999999999999999999997632 468999999999999999999999 9
Q ss_pred CeEecCCCCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-
Q 003199 656 PIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT- 734 (840)
Q Consensus 656 ~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t- 734 (840)
+|+||||||+||+++.++.+||+|||+++...... .........+|+.|+|||.+.+..++.++||||||+++|||++
T Consensus 194 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~ 272 (343)
T 1luf_A 194 KFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD-YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSY 272 (343)
T ss_dssp TCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGG-CBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CeecCCCCcceEEECCCCeEEEeecCCCcccccCc-cccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhc
Confidence 99999999999999999999999999998764421 1122344568899999999998899999999999999999999
Q ss_pred CCCCCCCCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCC
Q 003199 735 GRKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCR 814 (840)
Q Consensus 735 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 814 (840)
|+.||.+... ... .. .+.+.............+.+++.+||+.||++||++.+++++|+++....
T Consensus 273 g~~p~~~~~~--~~~---~~----------~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 273 GLQPYYGMAH--EEV---IY----------YVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp TCCTTTTSCH--HHH---HH----------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred CCCcCCCCCh--HHH---HH----------HHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 9999975311 111 00 01111111111122346777888999999999999999999999887654
Q ss_pred C
Q 003199 815 F 815 (840)
Q Consensus 815 ~ 815 (840)
.
T Consensus 338 ~ 338 (343)
T 1luf_A 338 E 338 (343)
T ss_dssp -
T ss_pred h
Confidence 3
No 75
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=355.07 Aligned_cols=260 Identities=24% Similarity=0.320 Sum_probs=206.8
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
.+.+.|...+.||+|+||.||+|... +|+.||||++.......... ....+.+.+|+.++++++||||+++++++
T Consensus 8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 83 (326)
T 2y0a_A 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRR----GVSREDIEREVSILKEIQHPNVITLHEVY 83 (326)
T ss_dssp CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSS----SBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccc----hhhHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 35577999999999999999999654 79999999986544321111 11246788999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCC----CCee
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNY----QPKV 677 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl 677 (840)
.+....++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||
T Consensus 84 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl 159 (326)
T 2y0a_A 84 ENKTDVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKI 159 (326)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHTTSS-CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEE
T ss_pred EeCCEEEEEEEcCCCCCHHHHHHhcC-CcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEE
Confidence 99999999999999999999997654 68999999999999999999999 9999999999999999877 7999
Q ss_pred ecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh
Q 003199 678 ADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV 757 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 757 (840)
+|||+++.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ... .....
T Consensus 160 ~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~--~~~~~- 230 (326)
T 2y0a_A 160 IDFGLAHKIDF----GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QET--LANVS- 230 (326)
T ss_dssp CCCTTCEECCT----TSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHH--HHHHH-
T ss_pred EECCCCeECCC----CCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHH--HHHHH-
Confidence 99999987632 1223446799999999999988999999999999999999999999975311 000 00000
Q ss_pred ccccchhhhcccccCC-CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 758 DTKEGIMEVLDKKLSG-SFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 758 ~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.. ...... .+......+.+++.+|++.||++|||+.|++++-
T Consensus 231 ~~--------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 273 (326)
T 2y0a_A 231 AV--------NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHP 273 (326)
T ss_dssp HT--------CCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHST
T ss_pred hc--------CCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 00 000000 0011234567788899999999999999999864
No 76
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.3e-40 Score=348.25 Aligned_cols=255 Identities=23% Similarity=0.295 Sum_probs=193.6
Q ss_pred HhcCccCeeeccCCcEEEEEEeCC----CcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNS----GEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
++|+..+.||+|+||.||+|.... +..||+|++.... .....+.+.+|+.++++++||||+++++++
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 85 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT---------SDSVREKFLQEALTMRQFDHPHIVKLIGVI 85 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT---------SHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC---------CHHHHHHHHHHHHHHHhCCCCccceEEEEE
Confidence 568888999999999999996642 4579999874322 123456789999999999999999999998
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
. ....++||||+++|+|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 86 ~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg 161 (281)
T 1mp8_A 86 T-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFG 161 (281)
T ss_dssp C-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC--
T ss_pred c-cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccc
Confidence 5 456789999999999999998776679999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
+++..... .........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.+... ......
T Consensus 162 ~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--~~~~~~-------- 229 (281)
T 1mp8_A 162 LSRYMEDS--TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGR-------- 229 (281)
T ss_dssp -------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHH--------
T ss_pred cccccCcc--cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--HHHHHH--------
Confidence 99876432 1222334457789999999988899999999999999999997 9999975321 111111
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
+......+........+.+++.+|++.||++|||+.|++++|+++
T Consensus 230 -----i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 230 -----IENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274 (281)
T ss_dssp -----HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----HHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 001111111112334567788899999999999999999999865
No 77
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-40 Score=357.93 Aligned_cols=251 Identities=25% Similarity=0.357 Sum_probs=201.5
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
.+|...+.||+|+||.||+|.. .+|+.||||++...... .......+.+|+.+++.++||||+++++++.+.
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~ 81 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLK-------KSDMHMRVEREISYLKLLRHPHIIKLYDVITTP 81 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-------HTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHcc-------chhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence 4678889999999999999965 67999999998432211 112235688999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+ +|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++.
T Consensus 82 ~~~~lv~E~~-~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~ 156 (336)
T 3h4j_B 82 TDIVMVIEYA-GGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSN 156 (336)
T ss_dssp SEEEEEECCC-CEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTB
T ss_pred CEEEEEEECC-CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccce
Confidence 9999999999 789999887654 69999999999999999999999 899999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCccccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKA-TTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
.... ........||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+...... .. .+
T Consensus 157 ~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~--~~----------~i 220 (336)
T 3h4j_B 157 IMTD----GNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--FK----------KV 220 (336)
T ss_dssp TTTT----SBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC--BC----------CC
T ss_pred eccC----CcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH--HH----------HH
Confidence 7643 223345679999999999988776 7899999999999999999999975321110 00 00
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
.. .....+.. ....+.+++.+|++.||.+|||++|++++-.
T Consensus 221 ~~-~~~~~p~~---~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 261 (336)
T 3h4j_B 221 NS-CVYVMPDF---LSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261 (336)
T ss_dssp CS-SCCCCCTT---SCHHHHHHHHTTSCSSGGGSCCHHHHTTCHH
T ss_pred Hc-CCCCCccc---CCHHHHHHHHHHcCCChhHCcCHHHHHhChh
Confidence 00 00011112 2345667888999999999999999998743
No 78
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.3e-40 Score=374.05 Aligned_cols=256 Identities=26% Similarity=0.389 Sum_probs=205.9
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|...+.||+|+||.||+|..+++..||||++.... ...+.|.+|+.++++++||||+++++++. ..
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-----------~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~ 255 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-----------MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KE 255 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-----------BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-----------ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CC
Confidence 4677888999999999999999888999999985432 12467899999999999999999999986 56
Q ss_pred cceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 606 CNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
..++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 256 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~ 332 (454)
T 1qcf_A 256 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLAR 332 (454)
T ss_dssp SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGG
T ss_pred ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCce
Confidence 7899999999999999997542 368899999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
..... .........+|+.|+|||++....++.++|||||||++|||++ |+.||.+... .......
T Consensus 333 ~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i---------- 398 (454)
T 1qcf_A 333 VIEDN--EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRAL---------- 398 (454)
T ss_dssp GBCCH--HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHH----------
T ss_pred EcCCC--ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH----------
Confidence 75321 1111233456789999999998899999999999999999999 9999975311 1111000
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCC
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPC 813 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 813 (840)
......+........+.+++.+||+.||++|||+.+|++.|+++...
T Consensus 399 ---~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 399 ---ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp ---HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred ---HcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 00000111122345677888899999999999999999999987643
No 79
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.7e-40 Score=357.02 Aligned_cols=258 Identities=24% Similarity=0.336 Sum_probs=198.8
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcE----EEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEV----VAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
++|+..+.||+|+||+||+|... +|+. ||+|.+.... .....+.+.+|+.++++++||||++++++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 85 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT---------SPKANKEILDEAYVMASVDNPHVCRLLGI 85 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC----------------CHHHHHHHHHHHHHCCBTTBCCEEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc---------CHHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence 46788899999999999999754 5554 5777663221 12335678999999999999999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecc
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADF 680 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 680 (840)
+.+.. .++|+||+++|+|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+||
T Consensus 86 ~~~~~-~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Df 161 (327)
T 3poz_A 86 CLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDF 161 (327)
T ss_dssp EESSS-EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCT
T ss_pred EecCC-eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccC
Confidence 98754 689999999999999998876689999999999999999999999 99999999999999999999999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhcc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDT 759 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 759 (840)
|+++...... .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ........
T Consensus 162 g~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~----- 233 (327)
T 3poz_A 162 GLAKLLGAEE-KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILE----- 233 (327)
T ss_dssp THHHHHTTTC-C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHH-----
T ss_pred cceeEccCCc-ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHHHH-----
Confidence 9998875422 2223334567889999999999999999999999999999999 9999975311 11111100
Q ss_pred ccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 760 KEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
..............+.+++.+||+.||++||++.|++++|+.+..
T Consensus 234 --------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 234 --------KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --------TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred --------cCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 000011112233467788889999999999999999999987644
No 80
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=2.2e-40 Score=345.67 Aligned_cols=256 Identities=26% Similarity=0.337 Sum_probs=207.6
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|+..+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++.+..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 76 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-----------SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA 76 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-----------CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-----------CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 46778889999999999999988889999999854321 1356889999999999999999999999999
Q ss_pred cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhh
Q 003199 606 CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKV 685 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 685 (840)
..++||||+++++|.+++......+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.
T Consensus 77 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~ 153 (267)
T 3t9t_A 77 PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRF 153 (267)
T ss_dssp SCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGG
T ss_pred CeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEcccccccc
Confidence 9999999999999999998776678999999999999999999999 9999999999999999999999999999976
Q ss_pred hhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 686 LQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 686 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
.... .........+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... .. .......
T Consensus 154 ~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~---~~~~~i~------- 219 (267)
T 3t9t_A 154 VLDD--QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--NS---EVVEDIS------- 219 (267)
T ss_dssp BCCH--HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HH---HHHHHHH-------
T ss_pred cccc--cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC--HH---HHHHHHh-------
Confidence 5321 1112233457788999999988899999999999999999999 899987531 11 1110000
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
.......+.. ....+.+++.+|++.||++|||+.+++++|+++..
T Consensus 220 ~~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 220 TGFRLYKPRL---ASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp TTCCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCcCCCCcc---CcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0000111111 23456778889999999999999999999987643
No 81
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.9e-40 Score=350.13 Aligned_cols=265 Identities=24% Similarity=0.333 Sum_probs=199.3
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|+..+.||+|+||+||+|...+|+.||||++...... ....+.+.+|++++++++||||+++++++.+..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 73 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKED--------EGIPSTTIREISILKELKHSNIVKLYDVIHTKK 73 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGG--------GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccc--------cccchhHHHHHHHHHhcCCCCEeeeeeEEccCC
Confidence 467888999999999999998888999999998543311 122356778999999999999999999999999
Q ss_pred cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhh
Q 003199 606 CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKV 685 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 685 (840)
..++||||+++ +|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++.
T Consensus 74 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 149 (288)
T 1ob3_A 74 RLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARA 149 (288)
T ss_dssp CEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHH
T ss_pred eEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccc
Confidence 99999999975 9999998765679999999999999999999999 9999999999999999999999999999987
Q ss_pred hhccCCCCcceecccccccccCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh-ccccch
Q 003199 686 LQARGGKDSTTTVIAGTYGYLAPEYAYSS-KATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV-DTKEGI 763 (840)
Q Consensus 686 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~ 763 (840)
... .........||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ........... ......
T Consensus 150 ~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 225 (288)
T 1ob3_A 150 FGI---PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNW 225 (288)
T ss_dssp HCC------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTS
T ss_pred cCc---cccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHHCCCChhhc
Confidence 642 12223445789999999998764 5899999999999999999999999753211 00000000000 000000
Q ss_pred hh-----hccccc--------CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 764 ME-----VLDKKL--------SGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 764 ~~-----~~~~~~--------~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.. ..+... ..........+.+++.+|++.||++|||+.|++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 226 PNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 000000 00011223456788889999999999999999876
No 82
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=360.13 Aligned_cols=253 Identities=24% Similarity=0.343 Sum_probs=202.3
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|...+.||+|+||.||+|... +|+.||+|++..... ......+.+.+|+.+++.++||||+++++++.+.
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-------~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 87 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-------VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDE 87 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-------HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-------ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 56888999999999999999654 689999999853321 1122346788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~ 163 (384)
T 4fr4_A 88 EDMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAA 163 (384)
T ss_dssp SEEEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceee
Confidence 99999999999999999998764 69999999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCcccccc---CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYS---SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .........
T Consensus 164 ~~~~----~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~--~~~~~~~~~--- 234 (384)
T 4fr4_A 164 MLPR----ETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS--KEIVHTFET--- 234 (384)
T ss_dssp ECCT----TCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCH--HHHHHHHHH---
T ss_pred eccC----CCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccH--HHHHHHHhh---
Confidence 6532 233455689999999999864 4589999999999999999999999975322111 111110000
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPT-MNEVVQL 806 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-~~evl~~ 806 (840)
.....+.. ....+.+++.+|++.||++||+ +.++.++
T Consensus 235 -----~~~~~p~~---~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 235 -----TVVTYPSA---WSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp -----CCCCCCTT---SCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred -----cccCCCCc---CCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 00111222 2345677888999999999998 7777764
No 83
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.2e-40 Score=363.79 Aligned_cols=259 Identities=26% Similarity=0.351 Sum_probs=204.4
Q ss_pred HHhcCccCeeeccCCcEEEEEEe------CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCccee
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL------NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKL 597 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l 597 (840)
.++|...+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|++++.++ +||||+++
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---------THSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---------CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC---------CHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 35788899999999999999963 356899999985332 123356789999999999 78999999
Q ss_pred eeEEecCcc-ceEEEeecCCCChHHHhhcCCC------------------------------------------------
Q 003199 598 YCYFSSLYC-NLLVYEYMPNGNLWDALHKGLV------------------------------------------------ 628 (840)
Q Consensus 598 ~~~~~~~~~-~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------ 628 (840)
++++.+... .++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987554 8999999999999999976431
Q ss_pred -----------------CCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhhhhccCC
Q 003199 629 -----------------HLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGG 691 (840)
Q Consensus 629 -----------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 691 (840)
.+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++..... .
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~-~ 247 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD-P 247 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSC-T
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeeccc-c
Confidence 18899999999999999999999 99999999999999999999999999999866432 2
Q ss_pred CCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccchhhhcccc
Q 003199 692 KDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKK 770 (840)
Q Consensus 692 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (840)
.........||+.|+|||++.+..++.++||||||+++|||++ |+.||....... .... ... ......
T Consensus 248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~--~~~--------~~~~~~ 316 (359)
T 3vhe_A 248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCR--RLK--------EGTRMR 316 (359)
T ss_dssp TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHH--HHH--------HTCCCC
T ss_pred cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHH--HHH--------cCCCCC
Confidence 2233445678999999999999999999999999999999998 999997532111 1100 000 000111
Q ss_pred cCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 771 LSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 771 ~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
.... ....+.+++.+||+.||++|||+.|++++|+++
T Consensus 317 ~~~~---~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 353 (359)
T 3vhe_A 317 APDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353 (359)
T ss_dssp CCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCC---CCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 1111 234567788899999999999999999999865
No 84
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.3e-40 Score=350.03 Aligned_cols=262 Identities=27% Similarity=0.361 Sum_probs=200.1
Q ss_pred HHhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhc--cCCCCcceeeeEEe
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGN--IRHKNIVKLYCYFS 602 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~ 602 (840)
.++|+..+.||+|+||+||+|.. +|+.||||++.... ...+..|.+++.. ++||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-------------~~~~~~e~~~~~~~~l~h~niv~~~~~~~ 72 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD-------------EKSWFRETELYNTVMLRHENILGFIASDM 72 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG-------------HHHHHHHHHHHHHTCCCCTTBCCEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc-------------chhhHHHHHHHHHhhccCcCeeeEEEeec
Confidence 45788899999999999999987 58999999984321 2344556666555 79999999999865
Q ss_pred c----CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHh--------hcCCCCeEecCCCCCCEEEc
Q 003199 603 S----LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLH--------HGLLSPIIHRDIKSTNILLD 670 (840)
Q Consensus 603 ~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~Dlk~~Nill~ 670 (840)
. ....++||||+++|+|.+++... .+++..+..++.|++.||+||| + ++|+||||||+||+++
T Consensus 73 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~ 147 (301)
T 3q4u_A 73 TSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVK 147 (301)
T ss_dssp EEETTEEEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEEC
T ss_pred cccCCCceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEc
Confidence 4 34578999999999999999754 6899999999999999999999 7 8999999999999999
Q ss_pred CCCCCeeecccchhhhhccCCCC-cceecccccccccCccccccC------CCCccccchhHHHHHHHHHhC--------
Q 003199 671 VNYQPKVADFGIAKVLQARGGKD-STTTVIAGTYGYLAPEYAYSS------KATTKCDVYSFGVVLMELITG-------- 735 (840)
Q Consensus 671 ~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~tg-------- 735 (840)
.++.+||+|||+++......... .......||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 148 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~ 227 (301)
T 3q4u_A 148 KNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVE 227 (301)
T ss_dssp TTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCC
T ss_pred CCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccc
Confidence 99999999999997654321111 112345799999999998776 455799999999999999999
Q ss_pred --CCCCCCCCCCCcchhhhhhhhhccccchhhhcccccCCC--cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 736 --RKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGS--FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 736 --~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
+.||.................... ......+.. .......+.+++.+||+.||++|||+.|+++.|++++
T Consensus 228 ~~~~pf~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 301 (301)
T 3q4u_A 228 DYKPPFYDVVPNDPSFEDMRKVVCVD------QQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKID 301 (301)
T ss_dssp CCCCTTTTTSCSSCCHHHHHHHHTTS------CCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHC
T ss_pred cccccccccCCCCcchhhhhHHHhcc------CCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhccC
Confidence 788765433322222211111000 011111111 1245677889999999999999999999999998763
No 85
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-40 Score=360.09 Aligned_cols=255 Identities=20% Similarity=0.298 Sum_probs=205.4
Q ss_pred HHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
+.+.|...+.||+|+||.||+|.. .+|+.||+|++.... ......+.+|+++++.++||||+++++++.
T Consensus 49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~----------~~~~~~~~~E~~il~~l~hpnIv~~~~~~~ 118 (387)
T 1kob_A 49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY----------PLDKYTVKNEISIMNQLHHPKLINLHDAFE 118 (387)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----------HHHHHHHHHHHHHHTTCCSTTBCCEEEEEE
T ss_pred cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc----------hhhHHHHHHHHHHHHhCCCcCCCeEEEEEE
Confidence 346788999999999999999965 478999999985332 122456889999999999999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC--CCCCeeecc
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV--NYQPKVADF 680 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~--~~~~kl~Df 680 (840)
+....++||||+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+||
T Consensus 119 ~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DF 195 (387)
T 1kob_A 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDF 195 (387)
T ss_dssp CSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCC
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEec
Confidence 9999999999999999999998766679999999999999999999999 99999999999999974 467999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
|+++.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+... . ..........
T Consensus 196 G~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~----~-~~~~~i~~~~ 266 (387)
T 1kob_A 196 GLATKLNP----DEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD----L-ETLQNVKRCD 266 (387)
T ss_dssp TTCEECCT----TSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH----H-HHHHHHHHCC
T ss_pred ccceecCC----CcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH----H-HHHHHHHhCC
Confidence 99987632 2233455799999999999999999999999999999999999999975311 1 1110000000
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
. ..+ ...+......+.+++.+|++.||++|||+.|++++-
T Consensus 267 ~----~~~---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 267 W----EFD---EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp C----CCC---SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred C----CCC---ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 0 001 111122345677888899999999999999999873
No 86
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.2e-40 Score=362.23 Aligned_cols=256 Identities=21% Similarity=0.294 Sum_probs=201.1
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 603 (840)
++|+..+.||+|+||+||+|..+ +++.||||++....... ....+.+.+|..++.++ +||||+++++++.+
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~-------~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~ 124 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVND-------DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT 124 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----------CCHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccC-------HHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE
Confidence 56888999999999999999665 68899999986543211 12234567889998887 89999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+++|+|..++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|
T Consensus 125 ~~~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla 200 (396)
T 4dc2_A 125 ESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMC 200 (396)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeeccee
Confidence 999999999999999999998764 69999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcc---hhhh-hhhhhcc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKN---IIYW-VSIKVDT 759 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~~~~-~~~~~~~ 759 (840)
+.... ........+||+.|+|||++.+..++.++|||||||++|||++|+.||......... .... ......
T Consensus 201 ~~~~~---~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~- 276 (396)
T 4dc2_A 201 KEGLR---PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE- 276 (396)
T ss_dssp BCCCC---TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH-
T ss_pred eeccc---CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc-
Confidence 75322 223345678999999999999999999999999999999999999999753221110 0000 000000
Q ss_pred ccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003199 760 KEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTM------NEVVQL 806 (840)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~evl~~ 806 (840)
....++.. ...++.+++.+|++.||++||++ .|++++
T Consensus 277 -------~~~~~p~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 277 -------KQIRIPRS---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp -------CCCCCCTT---SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred -------cccCCCCc---CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 01112222 23456678889999999999985 677766
No 87
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6.5e-40 Score=351.22 Aligned_cols=250 Identities=26% Similarity=0.350 Sum_probs=201.8
Q ss_pred cCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCcc
Q 003199 528 MTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLYC 606 (840)
Q Consensus 528 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 606 (840)
|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++.....
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----------QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEE 116 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----------CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTE
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----------hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCE
Confidence 666778999999999999765 799999999854321 124568899999999999999999999999999
Q ss_pred ceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhhh
Q 003199 607 NLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKVL 686 (840)
Q Consensus 607 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~ 686 (840)
.++||||+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 117 ~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 191 (321)
T 2c30_A 117 LWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 191 (321)
T ss_dssp EEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCcEEEeeeeeeeec
Confidence 99999999999999998764 68999999999999999999999 99999999999999999999999999998765
Q ss_pred hccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchhhh
Q 003199 687 QARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIMEV 766 (840)
Q Consensus 687 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (840)
... ........||+.|+|||++.+..++.++||||||+++|||++|+.||..... . ...... ...
T Consensus 192 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~----~-~~~~~~-------~~~ 256 (321)
T 2c30_A 192 SKD---VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP----V-QAMKRL-------RDS 256 (321)
T ss_dssp CSS---SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----H-HHHHHH-------HHS
T ss_pred ccC---ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----H-HHHHHH-------hcC
Confidence 331 1223456799999999999999999999999999999999999999975311 1 111000 000
Q ss_pred cccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 767 LDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 767 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
...... ........+.+++.+|++.||++|||+.|++++-.
T Consensus 257 ~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~ 297 (321)
T 2c30_A 257 PPPKLK-NSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297 (321)
T ss_dssp SCCCCT-TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred CCCCcC-ccccCCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 011110 11122345677888999999999999999998743
No 88
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.8e-40 Score=362.14 Aligned_cols=258 Identities=26% Similarity=0.322 Sum_probs=206.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeC--------CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcce
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN--------SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVK 596 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 596 (840)
++|...+.||+|+||.||+|... .+..||||++.... .....+.+.+|+++++++ +||||++
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~~hpnIv~ 139 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA---------TEKDLSDLISEMEMMKMIGKHKNIIN 139 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC---------CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc---------CHHHHHHHHHHHHHHHHhcCCchhhh
Confidence 57788899999999999999642 34679999985432 123456788999999999 8999999
Q ss_pred eeeEEecCccceEEEeecCCCChHHHhhcCC---------------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 003199 597 LYCYFSSLYCNLLVYEYMPNGNLWDALHKGL---------------VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRD 661 (840)
Q Consensus 597 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 661 (840)
+++++......++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+|||
T Consensus 140 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~D 216 (382)
T 3tt0_A 140 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRD 216 (382)
T ss_dssp EEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred heeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCC
Confidence 9999999999999999999999999998653 358999999999999999999999 9999999
Q ss_pred CCCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 003199 662 IKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVE 740 (840)
Q Consensus 662 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~ 740 (840)
|||+||+++.++.+||+|||+++...... .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||.
T Consensus 217 lkp~NIll~~~~~~kL~DFG~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~ 295 (382)
T 3tt0_A 217 LAARNVLVTEDNVMKIADFGLARDIHHID-YYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 295 (382)
T ss_dssp CCGGGEEECTTCCEEECSCSCCCCSSCCC-TTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CCcceEEEcCCCcEEEcccCccccccccc-ccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999998664321 1123344567889999999999999999999999999999999 999997
Q ss_pred CCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 741 DDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
... .. ........ ......... ....+.+++.+||+.||++|||+.|++++|+++.
T Consensus 296 ~~~--~~---~~~~~~~~-------~~~~~~~~~---~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 296 GVP--VE---ELFKLLKE-------GHRMDKPSN---CTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp TCC--HH---HHHHHHHT-------TCCCCCCSS---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCC--HH---HHHHHHHc-------CCCCCCCcc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 531 11 11110000 001111122 2345677888999999999999999999998754
No 89
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=9.5e-41 Score=361.15 Aligned_cols=252 Identities=25% Similarity=0.319 Sum_probs=198.6
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEe
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFS 602 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 602 (840)
.++|+..+.||+|+||+||+|..+ +|+.||||++..... ......+.+.+|..+++.+ .||||+++++++.
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~-------~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~ 94 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVI-------LQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ 94 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-------HHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHh-------cchhHHHHHHHHHHHHHhccCCCceeeEEEEEE
Confidence 467888999999999999999654 689999999854321 1123356678899999988 6999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccc
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGI 682 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 682 (840)
+....++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 95 ~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~ 170 (353)
T 3txo_A 95 TPDRLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGM 170 (353)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccc
Confidence 9999999999999999999998764 69999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 683 AKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 683 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
|+.... ........+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ..........
T Consensus 171 a~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~~i~~~--- 239 (353)
T 3txo_A 171 CKEGIC---NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFEAILND--- 239 (353)
T ss_dssp CBCSCC------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHC---
T ss_pred eeeccc---CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH-----HHHHHHHHcC---
Confidence 975322 22334556899999999999988899999999999999999999999975311 1111111100
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTM------NEVVQL 806 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~evl~~ 806 (840)
....+..+ ...+.+++.+|++.||++||++ .|+++|
T Consensus 240 -----~~~~p~~~---~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 240 -----EVVYPTWL---HEDATGILKSFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp -----CCCCCTTS---CHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred -----CCCCCCCC---CHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhC
Confidence 01112222 2446678889999999999998 788775
No 90
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6.1e-41 Score=360.87 Aligned_cols=278 Identities=24% Similarity=0.296 Sum_probs=207.7
Q ss_pred HhcCccCeeeccCCcEEEEEEe-----CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-----NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
++|+..+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|++++++++||||++++++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 92 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG----------PDQQRDFQREIQILKALHSDFIVKYRGV 92 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC----------HHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC----------HHHHHHHHHHHHHHHhcCCCceeEEEEE
Confidence 4678889999999999999974 468899999985332 2335678999999999999999999998
Q ss_pred Ee--cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeee
Q 003199 601 FS--SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVA 678 (840)
Q Consensus 601 ~~--~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 678 (840)
+. +....++||||+++++|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+
T Consensus 93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~ 169 (327)
T 3lxl_A 93 SYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIA 169 (327)
T ss_dssp EECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEEC
T ss_pred EecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEc
Confidence 86 4556789999999999999998755569999999999999999999999 999999999999999999999999
Q ss_pred cccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
|||+++................||+.|+|||++.+..++.++||||||+++|||++|+.||............+.. ...
T Consensus 170 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~-~~~ 248 (327)
T 3lxl_A 170 DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCER-DVP 248 (327)
T ss_dssp CGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC-----CC
T ss_pred ccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhccccc-ccc
Confidence 9999987643222222334456888999999998888999999999999999999999998642110000000000 000
Q ss_pred cccchhhhccc-ccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCCCC
Q 003199 759 TKEGIMEVLDK-KLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRFES 817 (840)
Q Consensus 759 ~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~ 817 (840)
........... ............+.+++.+|++.||++|||+.|++++|+.+.......
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 249 ALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred cHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 00000111111 111112233456778888999999999999999999999876554433
No 91
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5.3e-40 Score=353.93 Aligned_cols=260 Identities=19% Similarity=0.204 Sum_probs=205.0
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 603 (840)
.+|...+.||+|+||.||+|.. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 76 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------------APQLHLEYRFYKQLGSGDGIPQVYYFGPC 76 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------------SCCHHHHHHHHHHHCSCTTSCCEEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc------------hHHHHHHHHHHHHhhCCCCCCEEEEEEec
Confidence 4678889999999999999965 5799999999854321 12477899999999 89999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC-----Ceee
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ-----PKVA 678 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~-----~kl~ 678 (840)
....++||||+ +++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+
T Consensus 77 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~ 152 (330)
T 2izr_A 77 GKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHII 152 (330)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEEC
T ss_pred CCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEE
Confidence 99999999999 999999998765579999999999999999999999 99999999999999998876 9999
Q ss_pred cccchhhhhccCCCC----cceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhh
Q 003199 679 DFGIAKVLQARGGKD----STTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVS 754 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 754 (840)
|||+++.+....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ......
T Consensus 153 DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~~ 230 (330)
T 2izr_A 153 DFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERYQ 230 (330)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHHH
T ss_pred EcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHHH
Confidence 999998764422211 12245689999999999999999999999999999999999999998642211 111111
Q ss_pred hhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 755 IKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
....... ..........+ . ++.+++.+|++.||.+||++.++.+.|+++
T Consensus 231 ~i~~~~~---~~~~~~~~~~~---p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 231 KIGDTKR---ATPIEVLCENF---P-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp HHHHHHH---HSCHHHHTTTC---H-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred HHHhhhc---cCCHHHHhccC---h-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 0000000 00000011111 2 677888899999999999999999998754
No 92
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-40 Score=354.38 Aligned_cols=262 Identities=27% Similarity=0.367 Sum_probs=200.3
Q ss_pred HhcCccCeeeccCCcEEEEEEeCC-----CcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNS-----GEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
+.|+..+.||+|+||.||+|.... +..||||++.... .......+.+|+.++++++||||++++++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 114 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY---------TEKQRVDFLGEAGIMGQFSHHNIIRLEGV 114 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC---------CHHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC---------CHHHHHHHHHHHHHHHhCCCCCCCcEEEE
Confidence 346667899999999999996542 2369999985332 12335678899999999999999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecc
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADF 680 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 680 (840)
+.+....++||||+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 115 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Df 191 (333)
T 1mqb_A 115 ISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDF 191 (333)
T ss_dssp ECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC
T ss_pred EecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCC
Confidence 999999999999999999999998766679999999999999999999999 99999999999999999999999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhcc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDT 759 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 759 (840)
|+++................+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ... ..
T Consensus 192 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~---~~----- 261 (333)
T 1mqb_A 192 GLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEV---MK----- 261 (333)
T ss_dssp CC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHH---HH-----
T ss_pred CcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--HHH---HH-----
Confidence 999876543222222334456789999999998899999999999999999999 9999965311 000 00
Q ss_pred ccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCC
Q 003199 760 KEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCR 814 (840)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 814 (840)
.+......+........+.+++.+||+.||++||++.+++++|+++....
T Consensus 262 -----~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 262 -----AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp -----HHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred -----HHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 00111111111223345778888999999999999999999998765433
No 93
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-40 Score=350.27 Aligned_cols=248 Identities=26% Similarity=0.374 Sum_probs=202.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||+||+|... +|+.||+|++..... ......+.+.+|+.+++.++||||+++++++.+.
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~ 78 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-------VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDA 78 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-------HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECS
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-------hhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeC
Confidence 56888899999999999999664 799999999854321 1112346678899999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 79 ~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~ 154 (318)
T 1fot_A 79 QQIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAK 154 (318)
T ss_dssp SEEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred CEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcce
Confidence 99999999999999999998764 68999999999999999999999 999999999999999999999999999997
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.. .. .........
T Consensus 155 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~-~~~~~i~~~----- 218 (318)
T 1fot_A 155 YVPD------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN----TM-KTYEKILNA----- 218 (318)
T ss_dssp ECSS------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS----HH-HHHHHHHHC-----
T ss_pred ecCC------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC----HH-HHHHHHHhC-----
Confidence 6432 2334679999999999999999999999999999999999999997531 11 111111100
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRP-----TMNEVVQL 806 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~ 806 (840)
....+..+ ..++.+++.+|++.||++|| ++.|+++|
T Consensus 219 ---~~~~p~~~---~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 219 ---ELRFPPFF---NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp ---CCCCCTTS---CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred ---CCCCCCCC---CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 01112222 24566778899999999999 89999976
No 94
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=5e-39 Score=363.26 Aligned_cols=346 Identities=27% Similarity=0.364 Sum_probs=268.2
Q ss_pred CCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCC
Q 003199 15 PMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSL 94 (840)
Q Consensus 15 ~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 94 (840)
.+++|+.|++++|.++ .+|. +..+++|++|+|++| .+..+++ +..+++|++|++++|.+.+..+ ++++++|
T Consensus 44 ~l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n---~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L 114 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNN---QLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNL 114 (466)
T ss_dssp HHHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSS---CCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTC
T ss_pred HhccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCC---ccCCchh--hhccccCCEEECCCCccccChh--hcCCCCC
Confidence 3678899999999988 5564 788899999999999 5566654 8888999999999999886544 8889999
Q ss_pred cEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeec
Q 003199 95 TDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYN 174 (840)
Q Consensus 95 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 174 (840)
++|+|++|.+++. +. +..+++|++|++++|+ ...++ .+..+++|++|+++ |.+.+.. .+..+++|+.|++++
T Consensus 115 ~~L~L~~n~l~~~-~~-~~~l~~L~~L~l~~n~--l~~~~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~ 186 (466)
T 1o6v_A 115 TGLTLFNNQITDI-DP-LKNLTNLNRLELSSNT--ISDIS-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISS 186 (466)
T ss_dssp CEEECCSSCCCCC-GG-GTTCTTCSEEEEEEEE--ECCCG-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCS
T ss_pred CEEECCCCCCCCC-hH-HcCCCCCCEEECCCCc--cCCCh-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECcC
Confidence 9999999998854 33 8889999999999887 22343 48888899999986 4555332 388889999999999
Q ss_pred cccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCC
Q 003199 175 NSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLP 254 (840)
Q Consensus 175 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 254 (840)
|.+.+. ..+..+++|++|++++|++.+..+ +..+++|+.|++++|++++. ..+..+++|+.|++++|.+.+..+
T Consensus 187 n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~ 260 (466)
T 1o6v_A 187 NKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP 260 (466)
T ss_dssp SCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred CcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh
Confidence 988754 347888899999999999886544 67788899999999988754 356777788888888888776554
Q ss_pred cccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCc
Q 003199 255 DSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAIS 334 (840)
Q Consensus 255 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 334 (840)
+..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ ++.+++|+.|+|++|++++..| +..+++
T Consensus 261 --~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~ 332 (466)
T 1o6v_A 261 --LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTK 332 (466)
T ss_dssp --GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTT
T ss_pred --hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCcc
Confidence 7777888888888888874433 6777888888888888876544 6777888888888888876655 667778
Q ss_pred ccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccc
Q 003199 335 LVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTG 395 (840)
Q Consensus 335 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 395 (840)
|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 333 L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 333 LQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred CCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 88888888888754 457777888888888888877666 7777888888888888875
No 95
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=8.2e-41 Score=355.75 Aligned_cols=273 Identities=25% Similarity=0.311 Sum_probs=205.2
Q ss_pred HhcCccCeeeccCCcEEEEEEe-----CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-----NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
+.|+..+.||+|+||.||+|.+ .+++.||||++..... ....+.+.+|+++++.++||||++++++
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 91 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG---------GNHIADLKKEIEILRNLYHENIVKYKGI 91 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------------CCHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc---------chhHHHHHHHHHHHHhCCCCCeeeeeeE
Confidence 3477889999999999999973 4689999999854321 1234678899999999999999999999
Q ss_pred EecC--ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeee
Q 003199 601 FSSL--YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVA 678 (840)
Q Consensus 601 ~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 678 (840)
+... ...++||||+++|+|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+
T Consensus 92 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~ 168 (302)
T 4e5w_A 92 CTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIG 168 (302)
T ss_dssp EEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEEC
T ss_pred EecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEEC
Confidence 9876 66799999999999999997666679999999999999999999999 999999999999999999999999
Q ss_pred cccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
|||+++................||..|+|||.+.+..++.++||||+|+++|||++|+.|+...................
T Consensus 169 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 248 (302)
T 4e5w_A 169 DFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMT 248 (302)
T ss_dssp CCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGH
T ss_pred cccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccC
Confidence 99999876543222233445678889999999998899999999999999999999999864321000000000000000
Q ss_pred cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 759 TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
..............+........+.+++.+||+.||.+|||+.++++.|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 249 VTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 0000000111111111122345677888899999999999999999999864
No 96
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.1e-40 Score=349.09 Aligned_cols=249 Identities=21% Similarity=0.257 Sum_probs=194.3
Q ss_pred HHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEE
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYF 601 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 601 (840)
..++|+..+.||+|+||+||+|... +|+.||||++...... ......+..|+..+.++ .||||+++++++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~ 126 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRG--------PKDRARKLAEVGSHEKVGQHPCCVRLEQAW 126 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCS--------HHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccC--------hHHHHHHHHHHHHHHHhcCCCcEEEEEEEE
Confidence 3468999999999999999999665 7999999987443211 12233445566655555 899999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
.+....++||||+ +++|.+++......++|..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 127 ~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 127 EEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCT
T ss_pred EeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccce
Confidence 9999999999999 779999988776679999999999999999999999 899999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
++..... ........||+.|+|||++.+ .++.++|||||||++|||++|..|+... ..|.....
T Consensus 203 ~a~~~~~----~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~-------~~~~~~~~---- 266 (311)
T 3p1a_A 203 LLVELGT----AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG-------EGWQQLRQ---- 266 (311)
T ss_dssp TCEECC----------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH-------HHHHHHTT----
T ss_pred eeeeccc----CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc-------cHHHHHhc----
Confidence 9876532 223345569999999998876 7899999999999999999997766431 01111100
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
......... .....+.+++.+|++.||++|||+.|++++
T Consensus 267 ---~~~~~~~~~---~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 267 ---GYLPPEFTA---GLSSELRSVLVMMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp ---TCCCHHHHT---TSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---cCCCccccc---CCCHHHHHHHHHHcCCChhhCcCHHHHHhC
Confidence 000011111 123567788889999999999999999975
No 97
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=6.4e-40 Score=346.92 Aligned_cols=266 Identities=23% Similarity=0.297 Sum_probs=200.5
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||+||+|... +|+.||||++...... ......+.+|+.++++++||||+++++++.+.
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 73 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD--------EGVPSSALREICLLKELKHKNIVRLHDVLHSD 73 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSS--------TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCc--------CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeC
Confidence 46888899999999999999664 7899999998544321 22346678999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++ ++.+.+......+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 74 ~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~ 149 (292)
T 3o0g_A 74 KKLTLVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLAR 149 (292)
T ss_dssp TEEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccce
Confidence 999999999975 6766666655579999999999999999999999 999999999999999999999999999997
Q ss_pred hhhccCCCCcceecccccccccCccccccCC-CCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc-cccc
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSK-ATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD-TKEG 762 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~ 762 (840)
.... .........||+.|+|||++.+.. ++.++||||+||++|||++|..||................... ....
T Consensus 150 ~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~ 226 (292)
T 3o0g_A 150 AFGI---PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQ 226 (292)
T ss_dssp ECCS---CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred ecCC---ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhh
Confidence 6532 222334567899999999987765 7999999999999999999888864322111111111100000 0000
Q ss_pred hhhh---c----------ccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 763 IMEV---L----------DKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 763 ~~~~---~----------~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.... . ..............+.+++.+|++.||++|||++|++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 227 WPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 0 000011112234566788889999999999999999986
No 98
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=8.6e-40 Score=366.67 Aligned_cols=250 Identities=26% Similarity=0.348 Sum_probs=201.8
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|+..+.||+|+||.||+|.+. |+.||||++.... ..+.|.+|+.++++++||||+++++++.+..
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 259 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 259 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT------------TSHHHHHHHHHHHTCCCTTBCCEEEEEECTT
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch------------HHHHHHHHHHHHHhccCCCEEEEEEEEEcCC
Confidence 46778899999999999999887 7899999985332 1356889999999999999999999987655
Q ss_pred -cceEEEeecCCCChHHHhhcCCC-CCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 606 -CNLLVYEYMPNGNLWDALHKGLV-HLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 606 -~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 260 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a 336 (450)
T 1k9a_A 260 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLT 336 (450)
T ss_dssp SCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCc
Confidence 78999999999999999987543 37999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
+.... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||...... .....+ ..
T Consensus 337 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i---~~---- 401 (450)
T 1k9a_A 337 KEASS------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRV---EK---- 401 (450)
T ss_dssp EECC------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHH---HT----
T ss_pred ccccc------cccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH---Hc----
Confidence 75321 1223357889999999999999999999999999999998 99999754211 111110 00
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
-.....+ ......+.+++.+||+.||++|||+.++++.|+++..
T Consensus 402 ---~~~~~~p---~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 402 ---GYKMDAP---DGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp ---TCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---CCCCCCC---CcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 0001111 2233567778889999999999999999999987654
No 99
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.7e-40 Score=358.77 Aligned_cols=256 Identities=23% Similarity=0.264 Sum_probs=202.6
Q ss_pred HHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
+.+.|+..+.||+|+||+||+|.. .+|+.||||++........ .....+.+.+|+.+++.++||||+++++++.
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~ 96 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSS-----PGLSTEDLKREASICHMLKHPHIVELLETYS 96 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTS-----SSCCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhcccc-----ccchHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 456799999999999999999965 5799999999843321100 0112467889999999999999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcC---CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC---Ce
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKG---LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ---PK 676 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~k 676 (840)
+....++||||+++|+|.+.+... ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.++. +|
T Consensus 97 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vk 173 (351)
T 3c0i_A 97 SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVK 173 (351)
T ss_dssp ETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEE
T ss_pred eCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEE
Confidence 999999999999999998887643 2358999999999999999999999 99999999999999987654 99
Q ss_pred eecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhh
Q 003199 677 VADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIK 756 (840)
Q Consensus 677 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 756 (840)
|+|||+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ... +..
T Consensus 174 l~Dfg~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~--~~~-- 243 (351)
T 3c0i_A 174 LGGFGVAIQLGES---GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---ERL--FEG-- 243 (351)
T ss_dssp ECCCTTCEECCTT---SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---HHH--HHH--
T ss_pred EecCcceeEecCC---CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---HHH--HHH--
Confidence 9999999776431 222345679999999999999899999999999999999999999997521 110 100
Q ss_pred hccccchhhhcccccCC---CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 757 VDTKEGIMEVLDKKLSG---SFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 757 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
+....... .+......+.+++.+|++.||++|||+.|++++
T Consensus 244 ---------i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 244 ---------IIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287 (351)
T ss_dssp ---------HHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ---------HHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00001100 001123567788889999999999999999875
No 100
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.1e-40 Score=353.07 Aligned_cols=272 Identities=22% Similarity=0.304 Sum_probs=214.7
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC------CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceee
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN------SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLY 598 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 598 (840)
.++|+..+.||+|+||.||+|... +++.||||++.... .......+.+|+.+++.++||||++++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA---------SMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS---------CHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc---------CHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 357888999999999999998654 36889999985322 123345788999999999999999999
Q ss_pred eEEecCccceEEEeecCCCChHHHhhcCC---------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE
Q 003199 599 CYFSSLYCNLLVYEYMPNGNLWDALHKGL---------VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL 669 (840)
Q Consensus 599 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 669 (840)
+++.+....++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEE
Confidence 99999999999999999999999987531 357899999999999999999999 999999999999999
Q ss_pred cCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcc
Q 003199 670 DVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKN 748 (840)
Q Consensus 670 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~ 748 (840)
+.++.+||+|||+++...... .........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ..
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~ 248 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETD-YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQ 248 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGG-CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--HH
T ss_pred cCCCeEEECcCcccccccccc-ccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--HH
Confidence 999999999999998764321 1122234467889999999998899999999999999999999 8999875310 11
Q ss_pred hhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCCCCCCCCCCc
Q 003199 749 IIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRFESCKFPNKS 824 (840)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~~~~~~~~ 824 (840)
. .. .+...............+.+++.+|++.||++|||+.|++++|++.....+...+++..+
T Consensus 249 ~---~~----------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~~~~~~~ 311 (322)
T 1p4o_A 249 V---LR----------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYSE 311 (322)
T ss_dssp H---HH----------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHCSTTST
T ss_pred H---HH----------HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCccccccccc
Confidence 1 00 011111111112233456778889999999999999999999998877766665554443
No 101
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1e-39 Score=346.68 Aligned_cols=264 Identities=17% Similarity=0.191 Sum_probs=207.6
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 603 (840)
++|...+.||+|+||.||+|.. .+|+.||||++..... .+.+.+|+.+++.+ .|+|++++++++.+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------~~~~~~e~~~~~~l~~~~~i~~~~~~~~~ 77 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD------------APQLRDEYRTYKLLAGCTGIPNVYYFGQE 77 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT------------SCCHHHHHHHHHHTTTCTTCCCEEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc------------cHHHHHHHHHHHHHhcCCCCCeEEeecCC
Confidence 4688889999999999999964 6799999998853321 12467899999999 79999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC-----Ceee
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ-----PKVA 678 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~-----~kl~ 678 (840)
....++||||+ +++|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||+++.++. +||+
T Consensus 78 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~ 153 (298)
T 1csn_A 78 GLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVV 153 (298)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEEC
T ss_pred CceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEE
Confidence 99999999999 999999998766679999999999999999999999 99999999999999987776 9999
Q ss_pred cccchhhhhccCCCC----cceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhh
Q 003199 679 DFGIAKVLQARGGKD----STTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVS 754 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 754 (840)
|||+++......... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... ....
T Consensus 154 Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~-~~~~ 232 (298)
T 1csn_A 154 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ-KYER 232 (298)
T ss_dssp CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH-HHHH
T ss_pred ECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHH-HHHH
Confidence 999998765422211 12345679999999999999999999999999999999999999997642221111 1110
Q ss_pred hhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCC
Q 003199 755 IKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPC 813 (840)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 813 (840)
...... ......... .....+.+++.+||+.||++||+++++++.|+++...
T Consensus 233 ~~~~~~----~~~~~~~~~---~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 233 IGEKKQ----STPLRELCA---GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HHHHHH----HSCHHHHTT---TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred HHhhcc----CccHHHHHh---hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 000000 000000111 1234677788899999999999999999999876543
No 102
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=7.9e-40 Score=353.26 Aligned_cols=257 Identities=21% Similarity=0.284 Sum_probs=202.6
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 603 (840)
++|+..+.||+|+||.||+|..+ +|+.||||++...... .....+.+.+|+.++.++ +||||+++++++.+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-------~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~ 81 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVN-------DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT 81 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSC-------SHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhc-------chHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe
Confidence 46888899999999999999765 6899999998643311 123356688899999988 89999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||++
T Consensus 82 ~~~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a 157 (345)
T 3a8x_A 82 ESRLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMC 157 (345)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGC
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEecccc
Confidence 999999999999999999998754 68999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcc---hhhhhhhhhccc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKN---IIYWVSIKVDTK 760 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~ 760 (840)
+.... .........||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...........
T Consensus 158 ~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~- 233 (345)
T 3a8x_A 158 KEGLR---PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE- 233 (345)
T ss_dssp BCSCC---TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH-
T ss_pred ccccC---CCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc-
Confidence 75422 122344568999999999999999999999999999999999999999753211100 00000000000
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTM------NEVVQL 806 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~------~evl~~ 806 (840)
....++.. ....+.+++.+|++.||++||++ .|+++|
T Consensus 234 ------~~~~~p~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 234 ------KQIRIPRS---LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp ------CCCCCCTT---SCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred ------CCCCCCCC---CCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 00112222 23456678889999999999995 777766
No 103
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=6e-40 Score=368.14 Aligned_cols=256 Identities=29% Similarity=0.401 Sum_probs=200.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
+.|+..+.||+|+||.||+|..+++..||||++..... ..+.|.+|++++++++||||+++++++.+ .
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~ 251 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 251 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-----------CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C
Confidence 46778889999999999999998888999999854321 13568899999999999999999999876 6
Q ss_pred cceEEEeecCCCChHHHhhcC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 606 CNLLVYEYMPNGNLWDALHKG-LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
..++||||+++|+|.+++... ...+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++
T Consensus 252 ~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~ 328 (452)
T 1fmk_A 252 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR 328 (452)
T ss_dssp SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC
T ss_pred ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccce
Confidence 789999999999999999753 2358999999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
..... .........+++.|+|||.+.+..++.++||||||+++|||++ |+.||.+... ......
T Consensus 329 ~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~----------- 393 (452)
T 1fmk_A 329 LIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQ----------- 393 (452)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHH-----------
T ss_pred ecCCC--ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHH-----------
Confidence 76432 1222234457789999999998899999999999999999999 9999975311 111000
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCC
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPC 813 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 813 (840)
+......+........+.+++.+||+.||++|||+.++++.|+++...
T Consensus 394 --i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 394 --VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp --HHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred --HHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 000000111122334677788899999999999999999999987543
No 104
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4.2e-40 Score=373.27 Aligned_cols=255 Identities=25% Similarity=0.309 Sum_probs=206.6
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||.||+|.+. ++..||||++..... ..+.|.+|+.++++++||||++++++|...
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 288 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-----------EVEEFLKEAAVMKEIKHPNLVQLLGVCTRE 288 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-----------chHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 45778889999999999999776 488999999854321 145789999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 605 YCNLLVYEYMPNGNLWDALHKG-LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
...++||||+++|+|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 289 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a 365 (495)
T 1opk_A 289 PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLS 365 (495)
T ss_dssp SSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred CcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccc
Confidence 9999999999999999999864 3468999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
+.... ..........+++.|+|||++.+..++.++|||||||++|||++ |+.||..... .......
T Consensus 366 ~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--~~~~~~~--------- 432 (495)
T 1opk_A 366 RLMTG--DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELL--------- 432 (495)
T ss_dssp ECCTT--CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHH---------
T ss_pred eeccC--CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHH---------
Confidence 87633 11122233456789999999998899999999999999999999 9999975321 1111100
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
......... ......+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 433 -~~~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 433 -EKDYRMERP---EGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp -HTTCCCCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred -HcCCCCCCC---CCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 000011111 123356677888999999999999999999999875
No 105
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.2e-39 Score=351.75 Aligned_cols=254 Identities=22% Similarity=0.341 Sum_probs=199.6
Q ss_pred HHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
..++|+..+.||+|+||.||+|... +|+.||||++..... ....+.+.+|++++++++||||+++++++.
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 74 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR---------ELAREKVMREVKALAKLEHPGIVRYFNAWL 74 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCST---------TTHHHHHHHHHHHHTSCCCTTBCCEEEEEE
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCc---------hhHHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence 4678999999999999999999765 899999999854321 223567899999999999999999999985
Q ss_pred cCc---------------------------------------------------------cceEEEeecCCCChHHHhhc
Q 003199 603 SLY---------------------------------------------------------CNLLVYEYMPNGNLWDALHK 625 (840)
Q Consensus 603 ~~~---------------------------------------------------------~~~lV~e~~~~gsL~~~l~~ 625 (840)
+.. ..++||||+++|+|.+++..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~ 154 (332)
T 3qd2_B 75 ETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNR 154 (332)
T ss_dssp ECCSCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHT
T ss_pred EeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhc
Confidence 543 27899999999999999987
Q ss_pred CC--CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhhhhccCCC---------Cc
Q 003199 626 GL--VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGGK---------DS 694 (840)
Q Consensus 626 ~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~---------~~ 694 (840)
.. ...++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 155 ~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~ 231 (332)
T 3qd2_B 155 RCSLEDREHGVCLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA 231 (332)
T ss_dssp CCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------
T ss_pred ccCccchhhHHHHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccc
Confidence 53 235667789999999999999999 99999999999999999999999999999876432111 11
Q ss_pred ceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchhhhcccccCCC
Q 003199 695 TTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGS 774 (840)
Q Consensus 695 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 774 (840)
......||+.|+|||++.+..++.++||||||+++|||++|..|+... .. ..........+..
T Consensus 232 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~----------~~-------~~~~~~~~~~~~~ 294 (332)
T 3qd2_B 232 THTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER----------VR-------IITDVRNLKFPLL 294 (332)
T ss_dssp CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH----------HH-------HHHHHHTTCCCHH
T ss_pred cccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH----------HH-------HHHHhhccCCCcc
Confidence 223457999999999999999999999999999999999987764310 00 0111111122222
Q ss_pred cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 775 FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 775 ~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.......+.+++.+|++.||++|||+.|++++
T Consensus 295 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 295 FTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred cccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 33445667889999999999999999999975
No 106
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=6.3e-40 Score=351.04 Aligned_cols=257 Identities=24% Similarity=0.348 Sum_probs=205.8
Q ss_pred HhcCccCeeeccCCcEEEEEEe------CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL------NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYC 599 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 599 (840)
++|...+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~hp~iv~~~~ 93 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA---------SPSELRDLLSEFNVLKQVNHPHVIKLYG 93 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC---------CHHHHHHHHHHHHHHTTCCCTTBCCEEE
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC---------CHHHHHHHHHHHHHHhhCCCCceeeEEE
Confidence 5678889999999999999964 345899999985322 1233567899999999999999999999
Q ss_pred EEecCccceEEEeecCCCChHHHhhcCC-----------------------CCCChHHHHHHHHHHHHHHHHHhhcCCCC
Q 003199 600 YFSSLYCNLLVYEYMPNGNLWDALHKGL-----------------------VHLDWPTRHKIAFGVAQGLAYLHHGLLSP 656 (840)
Q Consensus 600 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ 656 (840)
++.+....++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+ ++
T Consensus 94 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ 170 (314)
T 2ivs_A 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MK 170 (314)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred EEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CC
Confidence 9999999999999999999999998643 237899999999999999999999 99
Q ss_pred eEecCCCCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-C
Q 003199 657 IIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-G 735 (840)
Q Consensus 657 ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g 735 (840)
|+||||||+||+++.++.+||+|||+++...... .........+|+.|+|||.+.+..++.++||||||+++|||++ |
T Consensus 171 ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 249 (314)
T 2ivs_A 171 LVHRDLAARNILVAEGRKMKISDFGLSRDVYEED-SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249 (314)
T ss_dssp EECCCCSGGGEEEETTTEEEECCCTTCEECTTTS-CEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTS
T ss_pred CcccccchheEEEcCCCCEEEccccccccccccc-cceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999997664321 1122334567889999999988889999999999999999999 9
Q ss_pred CCCCCCCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 736 RKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 736 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
+.||.+... ........ ......... .....+.+++.+|++.||++||++.|++++|+++
T Consensus 250 ~~p~~~~~~--~~~~~~~~----------~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 250 GNPYPGIPP--ERLFNLLK----------TGHRMERPD---NCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp CCSSTTCCG--GGHHHHHH----------TTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCH--HHHHHHhh----------cCCcCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 999975321 11111000 000011111 2334577788899999999999999999999875
No 107
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=6e-40 Score=343.22 Aligned_cols=254 Identities=29% Similarity=0.419 Sum_probs=192.3
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|+..+.||+|+||.||+|... |+.||||++...... ......+.+.+|+++++.++||||+++++++.+..
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 79 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDE------DISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP 79 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcc------cHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 46778889999999999999876 899999998543321 11233567889999999999999999999999999
Q ss_pred cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCC---eEecCCCCCCEEEcC--------CCC
Q 003199 606 CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSP---IIHRDIKSTNILLDV--------NYQ 674 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~---ivH~Dlk~~Nill~~--------~~~ 674 (840)
..++||||+++++|.+++... .+++..+..++.|++.||+|||+ ++ |+||||||+||+++. ++.
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~ 154 (271)
T 3dtc_A 80 NLCLVMEFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKI 154 (271)
T ss_dssp -CEEEEECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCC
T ss_pred ceEEEEEcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcc
Confidence 999999999999999999754 68999999999999999999999 77 999999999999986 678
Q ss_pred CeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhh
Q 003199 675 PKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVS 754 (840)
Q Consensus 675 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 754 (840)
+||+|||+++..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ....+.
T Consensus 155 ~kl~Dfg~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~~~~- 225 (271)
T 3dtc_A 155 LKITDFGLAREWHRT-----TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDG---LAVAYG- 225 (271)
T ss_dssp EEECCCCC------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCH---HHHHHH-
T ss_pred eEEccCCcccccccc-----cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHh-
Confidence 999999999865431 22245789999999999988999999999999999999999999975311 000000
Q ss_pred hhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 755 IKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
... ......... .....+.+++.+|++.||++|||+.|++++|+++
T Consensus 226 ~~~-------~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 226 VAM-------NKLALPIPS---TCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHT-------SCCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred hhc-------CCCCCCCCc---ccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 000 000111112 2234567788899999999999999999999864
No 108
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-40 Score=347.73 Aligned_cols=265 Identities=20% Similarity=0.258 Sum_probs=208.1
Q ss_pred hcCccC-eeeccCCcEEEEEEeC---CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 527 AMTEKN-KVGQGGSGTVYKIDLN---SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 527 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
+|...+ .||+|+||.||+|... ++..||||++.... .....+.+.+|++++++++||||+++++++
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~- 79 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT---------EKADTEEMMREAQIMHQLDNPYIVRLIGVC- 79 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC---------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc---------chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-
Confidence 444554 8999999999999653 57889999985432 123456789999999999999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccc
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGI 682 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 682 (840)
..+..++||||+++++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~ 156 (287)
T 1u59_A 80 QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGL 156 (287)
T ss_dssp ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTT
T ss_pred cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccc
Confidence 4556899999999999999998766679999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 683 AKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 683 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
++................+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ....... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~i---~~--- 228 (287)
T 1u59_A 157 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFI---EQ--- 228 (287)
T ss_dssp CEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--HHHHHHH---HT---
T ss_pred eeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHH---hc---
Confidence 9876432222222334557899999999988889999999999999999998 9999975321 1111110 00
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCCCCCC
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRFESCK 819 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~~~ 819 (840)
........ .....+.+++.+||+.||++||++.+++++|+.+.........
T Consensus 229 ----~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~~~ 279 (287)
T 1u59_A 229 ----GKRMECPP---ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVE 279 (287)
T ss_dssp ----TCCCCCCT---TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTTCS
T ss_pred ----CCcCCCCC---CcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCccc
Confidence 00011112 2335677788899999999999999999999876554444433
No 109
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.4e-40 Score=353.66 Aligned_cols=263 Identities=22% Similarity=0.276 Sum_probs=192.2
Q ss_pred HhcCccCeeeccCCcEEEEEEeCC-Cc---EEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNS-GE---VVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
++|...+.||+|+||.||+|.... ++ .||||++...... ....+.+.+|++++++++||||+++++++
T Consensus 23 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 94 (323)
T 3qup_A 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIA--------SSDIEEFLREAACMKEFDHPHVAKLVGVS 94 (323)
T ss_dssp --CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------------CHHHHHHHHHHHHHTTCCCTTBCCCCEEE
T ss_pred hHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccC--------HHHHHHHHHHHHHHHHCCCCceehhhcee
Confidence 468888999999999999997653 32 7999998543211 22356789999999999999999999999
Q ss_pred ecCccc------eEEEeecCCCChHHHhhcCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEc
Q 003199 602 SSLYCN------LLVYEYMPNGNLWDALHKGL-----VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLD 670 (840)
Q Consensus 602 ~~~~~~------~lV~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 670 (840)
...... ++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++
T Consensus 95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~ 171 (323)
T 3qup_A 95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLA 171 (323)
T ss_dssp ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEC
T ss_pred eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEc
Confidence 877655 89999999999999986432 258999999999999999999999 9999999999999999
Q ss_pred CCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcch
Q 003199 671 VNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNI 749 (840)
Q Consensus 671 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~ 749 (840)
.++.+||+|||+++...... .........+++.|+|||.+.+..++.++|||||||++|||++ |+.||.+... ...
T Consensus 172 ~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~ 248 (323)
T 3qup_A 172 EDMTVCVADFGLSRKIYSGD-YYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEI 248 (323)
T ss_dssp TTSCEEECCCCC------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGH
T ss_pred CCCCEEEeeccccccccccc-cccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--HHH
Confidence 99999999999998764321 1222334557889999999999999999999999999999999 9999975321 111
Q ss_pred hhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCC
Q 003199 750 IYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRF 815 (840)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 815 (840)
.. .................+.+++.+|++.||++|||+.++++.|+++-....
T Consensus 249 ~~-------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 249 YN-------------YLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp HH-------------HHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HH-------------HHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 10 011111111112233467788889999999999999999999997655544
No 110
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=5.6e-40 Score=358.47 Aligned_cols=248 Identities=24% Similarity=0.327 Sum_probs=194.7
Q ss_pred ccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCccce
Q 003199 530 EKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLYCNL 608 (840)
Q Consensus 530 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 608 (840)
..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+....+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 162 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG----------MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIV 162 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCS----------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc----------cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence 356899999999999965 579999999985432 123467889999999999999999999999999999
Q ss_pred EEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE--cCCCCCeeecccchhhh
Q 003199 609 LVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL--DVNYQPKVADFGIAKVL 686 (840)
Q Consensus 609 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill--~~~~~~kl~Dfg~a~~~ 686 (840)
+||||+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++..
T Consensus 163 lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~ 239 (373)
T 2x4f_A 163 LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239 (373)
T ss_dssp EEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEEC
T ss_pred EEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceec
Confidence 9999999999999997765579999999999999999999999 999999999999999 56778999999999876
Q ss_pred hccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchhhh
Q 003199 687 QARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIMEV 766 (840)
Q Consensus 687 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (840)
.. ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .. .... .......
T Consensus 240 ~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~--~~~~-i~~~~~~---- 306 (373)
T 2x4f_A 240 KP----REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND--AE--TLNN-ILACRWD---- 306 (373)
T ss_dssp CT----TCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH--HH--HHHH-HHHTCCC----
T ss_pred CC----ccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH--HH--HHHH-HHhccCC----
Confidence 33 2223345799999999999888899999999999999999999999975311 10 0000 0000000
Q ss_pred cccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 767 LDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 767 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
. ....+......+.+++.+|++.||.+|||+.|++++
T Consensus 307 ~---~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 307 L---EDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343 (373)
T ss_dssp S---CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred C---ChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 011112234567778889999999999999999985
No 111
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=7.1e-40 Score=354.14 Aligned_cols=249 Identities=24% Similarity=0.300 Sum_probs=203.5
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||.||+|... +|+.||||++..... ......+.+.+|+.+++.++||||+++++++.+.
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 113 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKV-------VKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 113 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-------HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHh-------ccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 56888899999999999999665 799999999844321 1122346788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 114 ~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~ 189 (350)
T 1rdq_E 114 SNLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189 (350)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccce
Confidence 99999999999999999998754 68999999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...........
T Consensus 190 ~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~----- 253 (350)
T 1rdq_E 190 RVKG------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----PIQIYEKIVSG----- 253 (350)
T ss_dssp ECSS------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHC-----
T ss_pred eccC------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC-----HHHHHHHHHcC-----
Confidence 6532 2234679999999999999999999999999999999999999997531 11111110100
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHh
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPT-----MNEVVQLL 807 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~evl~~L 807 (840)
...++..+ ...+.+++.+|++.||++||+ ++|++++-
T Consensus 254 ---~~~~p~~~---~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~ 295 (350)
T 1rdq_E 254 ---KVRFPSHF---SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295 (350)
T ss_dssp ---CCCCCTTC---CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSG
T ss_pred ---CCCCCCCC---CHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCc
Confidence 01112222 345667888999999999998 89998764
No 112
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=2.5e-40 Score=354.39 Aligned_cols=269 Identities=26% Similarity=0.347 Sum_probs=204.8
Q ss_pred cCccCeeeccCCcEEEEEEeC-----CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 528 MTEKNKVGQGGSGTVYKIDLN-----SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 528 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
|+..+.||+|+||+||+|.+. +|+.||||++.... .....+.+.+|++++++++||||+++++++.
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 103 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA---------GPQHRSGWKQEIDILRTLYHEHIIKYKGCCE 103 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC---------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc---------ChHHHHHHHHHHHHHHhCCCcchhhEEEEEe
Confidence 378889999999999988653 68899999985432 1234567899999999999999999999998
Q ss_pred cC--ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecc
Q 003199 603 SL--YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADF 680 (840)
Q Consensus 603 ~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 680 (840)
+. ...++||||+++|+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 104 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Df 178 (318)
T 3lxp_A 104 DAGAASLQLVMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDF 178 (318)
T ss_dssp ETTTTEEEEEECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCG
T ss_pred cCCCceEEEEEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCc
Confidence 74 5678999999999999999875 48999999999999999999999 99999999999999999999999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
|+++................+|+.|+|||.+.+..++.++||||||+++|||++|+.||............+........
T Consensus 179 g~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~ 258 (318)
T 3lxp_A 179 GLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVL 258 (318)
T ss_dssp GGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHH
T ss_pred cccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHH
Confidence 99987644222222334556888999999999889999999999999999999999998642110000000000000000
Q ss_pred cchhhhcccc-cCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 761 EGIMEVLDKK-LSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 761 ~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
.....+... ...........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 259 -~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 259 -RLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp -HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 011111111 11112233456778888999999999999999999998764
No 113
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.1e-39 Score=344.44 Aligned_cols=262 Identities=30% Similarity=0.409 Sum_probs=194.3
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
.+|+..+.||+|+||.||+|... ..||||++..... .....+.+.+|++++++++||||+++++++ ...
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~ 92 (289)
T 3og7_A 24 GQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAP--------TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAP 92 (289)
T ss_dssp TSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSC--------CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSS
T ss_pred cceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCC--------CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCC
Confidence 45778899999999999999765 3599999854332 133457789999999999999999999966 455
Q ss_pred cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhh
Q 003199 606 CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKV 685 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 685 (840)
..++||||+++++|.+++......+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~ 169 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATE 169 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC----
T ss_pred ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccc
Confidence 6799999999999999998776679999999999999999999999 9999999999999999999999999999976
Q ss_pred hhccCCCCcceecccccccccCccccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 686 LQARGGKDSTTTVIAGTYGYLAPEYAY---SSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 686 ~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
..... .........||+.|+|||.+. +..++.++||||||+++|||++|+.||...... ....... ..
T Consensus 170 ~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~---~~---- 240 (289)
T 3og7_A 170 KSRWS-GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIEMV---GR---- 240 (289)
T ss_dssp ---------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-HHHHHHH---HH----
T ss_pred ccccc-ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH-HHHHHHh---cc----
Confidence 54321 122334567999999999886 567889999999999999999999999753211 1111100 00
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
.................+.+++.+|++.||++|||+.++++.|+++..
T Consensus 241 --~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 241 --GSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp --TSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred --cccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 001111111112334567788889999999999999999999998753
No 114
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4e-40 Score=353.86 Aligned_cols=258 Identities=24% Similarity=0.330 Sum_probs=196.4
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcE----EEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEV----VAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
++|...+.||+|+||.||+|... +++. ||+|.+..... ....+.+.+|+.++++++||||++++++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~---------~~~~~~~~~E~~~l~~l~hp~iv~~~~~ 85 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS---------PKANKEILDEAYVMASVDNPHVCRLLGI 85 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSS---------CCCHHHHHHHHHHHTTCCBTTBCCCCEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccC---------HHHHHHHHHHHHHHHhCCCCCeeEEEEE
Confidence 46788899999999999999654 5654 46666532221 1234678899999999999999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecc
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADF 680 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 680 (840)
+.... .++|+||+.+|+|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+||
T Consensus 86 ~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~Df 161 (327)
T 3lzb_A 86 CLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDF 161 (327)
T ss_dssp EESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCT
T ss_pred EecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccC
Confidence 98764 789999999999999998876679999999999999999999999 99999999999999999999999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhcc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDT 759 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 759 (840)
|+++...... .........+|+.|+|||.+.+..++.++|||||||++|||++ |+.||..... ........
T Consensus 162 G~a~~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~----- 233 (327)
T 3lzb_A 162 GLAKLLGAEE-KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILE----- 233 (327)
T ss_dssp TC-----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHH-----
T ss_pred cceeEccCcc-ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHH-----
Confidence 9998764321 2222334557889999999999999999999999999999999 9999975321 11111100
Q ss_pred ccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 760 KEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
..............+.+++.+||+.||.+||++.|+++.|+++..
T Consensus 234 --------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 234 --------KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp --------TTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred --------cCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 000011111223456778889999999999999999999987654
No 115
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=353.83 Aligned_cols=262 Identities=23% Similarity=0.308 Sum_probs=206.3
Q ss_pred HhcCccCeeeccCCcEEEEEEe------CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL------NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLY 598 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 598 (840)
++|...+.||+|+||.||+|.. .++..||||++..... ....+.+.+|+.+++++ .||||++++
T Consensus 45 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l~~hp~iv~~~ 115 (344)
T 1rjb_A 45 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD---------SSEREALMSELKMMTQLGSHENIVNLL 115 (344)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------------CHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred HHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC---------HHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence 6788899999999999999975 2456899999853321 12246788999999999 899999999
Q ss_pred eEEecCccceEEEeecCCCChHHHhhcCCC----------------------CCChHHHHHHHHHHHHHHHHHhhcCCCC
Q 003199 599 CYFSSLYCNLLVYEYMPNGNLWDALHKGLV----------------------HLDWPTRHKIAFGVAQGLAYLHHGLLSP 656 (840)
Q Consensus 599 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ 656 (840)
+++......++||||+++|+|.+++..... .+++..+..++.|++.||+|||+ ++
T Consensus 116 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ 192 (344)
T 1rjb_A 116 GACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KS 192 (344)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TT
T ss_pred EEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence 999999999999999999999999976532 37899999999999999999999 99
Q ss_pred eEecCCCCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-C
Q 003199 657 IIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-G 735 (840)
Q Consensus 657 ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g 735 (840)
|+||||||+||+++.++.+||+|||++...... ..........||+.|+|||.+.+..++.++||||||+++|||+| |
T Consensus 193 ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g 271 (344)
T 1rjb_A 193 CVHRDLAARNVLVTHGKVVKICDFGLARDIMSD-SNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271 (344)
T ss_dssp EEETTCSGGGEEEETTTEEEECCCGGGSCGGGC-TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTS
T ss_pred cccCCCChhhEEEcCCCcEEeCCCccCcccccC-ccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCC
Confidence 999999999999999999999999999876542 22223345567889999999988899999999999999999998 9
Q ss_pred CCCCCCCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCC
Q 003199 736 RKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCR 814 (840)
Q Consensus 736 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 814 (840)
+.||...... ........ ......... .....+.+++.+||+.||++|||+.+++++|+.+....
T Consensus 272 ~~p~~~~~~~-~~~~~~~~----------~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 272 VNPYPGIPVD-ANFYKLIQ----------NGFKMDQPF---YATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CCSSTTCCCS-HHHHHHHH----------TTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred CCCcccCCcH-HHHHHHHh----------cCCCCCCCC---CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 9999764211 11111100 000111111 12345777888999999999999999999998765543
No 116
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.8e-41 Score=356.59 Aligned_cols=263 Identities=26% Similarity=0.356 Sum_probs=188.1
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhc--cCCCCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGN--IRHKNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~ 603 (840)
++|...+.||+|+||.||+|... |+.||||++.... ...+.+|.+++.. ++||||+++++++..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-------------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~ 68 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-------------ERSWFREAEIYQTVMLRHENILGFIAADNK 68 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT-------------HHHHHHHHHHHTSTTCCC-CBCCEEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc-------------hhhHHHHHHHHHHHhccCcceeeeeeeccc
Confidence 57888999999999999999775 8999999984221 3456678888877 789999999999987
Q ss_pred Cc----cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHh--------hcCCCCeEecCCCCCCEEEcC
Q 003199 604 LY----CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLH--------HGLLSPIIHRDIKSTNILLDV 671 (840)
Q Consensus 604 ~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~Dlk~~Nill~~ 671 (840)
.. ..++||||+++|+|.+++... .+++..+..++.|++.||+||| + ++|+||||||+||+++.
T Consensus 69 ~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~ 143 (303)
T 3gxj_A 69 DNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKK 143 (303)
T ss_dssp ECSSSEEEEEEEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCT
T ss_pred CCCccceeEEEEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECC
Confidence 66 679999999999999999765 5788999999999999999999 7 89999999999999999
Q ss_pred CCCCeeecccchhhhhccCCC-CcceecccccccccCccccccC------CCCccccchhHHHHHHHHHhC---------
Q 003199 672 NYQPKVADFGIAKVLQARGGK-DSTTTVIAGTYGYLAPEYAYSS------KATTKCDVYSFGVVLMELITG--------- 735 (840)
Q Consensus 672 ~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~slG~il~el~tg--------- 735 (840)
++.+||+|||+++........ ........||+.|+|||++.+. .++.++|||||||++|||++|
T Consensus 144 ~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~ 223 (303)
T 3gxj_A 144 NGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHED 223 (303)
T ss_dssp TCCC-BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-C
T ss_pred CCCEEEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccce
Confidence 999999999999765432111 1122345799999999998776 344689999999999999999
Q ss_pred -CCCCCCCCCCCcchhhhhhhhhccccchhhhcccccCCCc--HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 736 -RKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSF--RDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 736 -~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
+.||.................. .....+.....+ .+....+.+++.+||+.||++|||+.++++.|+++..
T Consensus 224 ~~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 224 YQLPYYDLVPSDPSVEEMRKVVC------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp CCCTTTTTCC-CCCCC-CHHHHT------TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred eeccccccCCCCccHHHHHHHHH------HhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 5666443221111111111000 001111111111 2556678899999999999999999999999998765
Q ss_pred C
Q 003199 813 C 813 (840)
Q Consensus 813 ~ 813 (840)
.
T Consensus 298 ~ 298 (303)
T 3gxj_A 298 Q 298 (303)
T ss_dssp C
T ss_pred h
Confidence 4
No 117
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.6e-40 Score=356.28 Aligned_cols=252 Identities=25% Similarity=0.383 Sum_probs=201.8
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEe
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFS 602 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 602 (840)
.++|...+.||+|+||+||+|..+ +|+.||||++...... .....+.+..|..++..+ +||||+++++++.
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~ 88 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVL-------MDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ 88 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHH-------HTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhh-------hhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE
Confidence 467888999999999999999765 6899999998543211 112245677888898877 8999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccc
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGI 682 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 682 (840)
+....++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 89 ~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~ 164 (345)
T 1xjd_A 89 TKENLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGM 164 (345)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred eCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChh
Confidence 9999999999999999999998754 68999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 683 AKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 683 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
++.... .........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.. ....+......
T Consensus 165 a~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~----~~~~~~~i~~~---- 233 (345)
T 1xjd_A 165 CKENML---GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD----EEELFHSIRMD---- 233 (345)
T ss_dssp CBCCCC---TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHC----
T ss_pred hhhccc---CCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC----HHHHHHHHHhC----
Confidence 975422 1223455689999999999999999999999999999999999999997531 11111111000
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHH-HHHHH
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMN-EVVQL 806 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~-evl~~ 806 (840)
....+..+ ...+.+++.+|++.||++||++. +++++
T Consensus 234 -----~~~~p~~~---s~~~~~li~~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 234 -----NPFYPRWL---EKEAKDLLVKLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp -----CCCCCTTS---CHHHHHHHHHHSCSSGGGSBTTBSCGGGS
T ss_pred -----CCCCCccc---CHHHHHHHHHHhcCCHhHcCCChHHHHcC
Confidence 11122222 34566788899999999999997 77654
No 118
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=7.2e-40 Score=354.88 Aligned_cols=251 Identities=25% Similarity=0.368 Sum_probs=188.6
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.+.|...+.||+|+||.||+|... +++.||||++.... ..+.+.+|++++++++||||+++++++.+
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~------------~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 119 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV------------DKKIVRTEIGVLLRLSHPNIIKLKEIFET 119 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------------------CHHHHHCCCTTBCCEEEEEEC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch------------hHHHHHHHHHHHHhCCCCCCcceeeeEec
Confidence 456888899999999999999765 68899999985322 13457789999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC---CCCCeeecc
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV---NYQPKVADF 680 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~Df 680 (840)
....++||||+++|+|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+||
T Consensus 120 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Df 195 (349)
T 2w4o_A 120 PTEISLVLELVTGGELFDRIVEKG-YYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADF 195 (349)
T ss_dssp SSEEEEEECCCCSCBHHHHHTTCS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCC
T ss_pred CCeEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccC
Confidence 999999999999999999998754 68999999999999999999999 99999999999999975 889999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
|+++.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+... ....
T Consensus 196 g~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~~~~~i-~~~~ 267 (349)
T 2w4o_A 196 GLSKIVEH----QVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD---QFMFRRI-LNCE 267 (349)
T ss_dssp C--------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH---HHHHHHH-HTTC
T ss_pred ccccccCc----ccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc---HHHHHHH-HhCC
Confidence 99987532 22234567999999999999989999999999999999999999999753211 1011110 0000
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
. ....+........+.+++.+|++.||++|||+.|++++
T Consensus 268 ~-------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 268 Y-------YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp C-------CCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred C-------ccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 00111112234567788889999999999999999986
No 119
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=343.16 Aligned_cols=253 Identities=32% Similarity=0.475 Sum_probs=196.2
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|+..+.||+|+||+||+|... ++.||||++... ...+.+.+|++++++++||||+++++++.+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~------------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-- 72 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE------------SERKAFIVELRQLSRVNHPNIVKLYGACLN-- 72 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST------------THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh------------hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--
Confidence 46778889999999999999876 789999998422 124678899999999999999999998874
Q ss_pred cceEEEeecCCCChHHHhhcCC--CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC-Ceeecccc
Q 003199 606 CNLLVYEYMPNGNLWDALHKGL--VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ-PKVADFGI 682 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~-~kl~Dfg~ 682 (840)
..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||+.+.++|+||||||+||+++.++. +||+|||+
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~ 152 (307)
T 2eva_A 73 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGT 152 (307)
T ss_dssp TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC
T ss_pred CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccc
Confidence 4789999999999999998654 24788999999999999999999865568999999999999998887 79999999
Q ss_pred hhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 683 AKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 683 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
+..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... .....|...
T Consensus 153 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~------- 218 (307)
T 2eva_A 153 ACDIQT------HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP-AFRIMWAVH------- 218 (307)
T ss_dssp ------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS-HHHHHHHHH-------
T ss_pred cccccc------ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc-HHHHHHHHh-------
Confidence 976532 122346899999999999989999999999999999999999999753211 111111100
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
..............+.+++.+||+.||++|||+.++++.|+.+..
T Consensus 219 -----~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 263 (307)
T 2eva_A 219 -----NGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263 (307)
T ss_dssp -----TTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGG
T ss_pred -----cCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHH
Confidence 000111111223456778889999999999999999999987643
No 120
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.7e-40 Score=353.03 Aligned_cols=262 Identities=24% Similarity=0.333 Sum_probs=195.4
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||.||+|.. .+++.||||++..... ........+.+|+.++++++||||+++++++...
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 84 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-------RDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE 84 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-------TSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-------CCHHHHHHHHHHHHHHHcCCCCCcceEEEeeecc
Confidence 5788899999999999999965 6799999999854321 1234456789999999999999999999998776
Q ss_pred ccc----eEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecc
Q 003199 605 YCN----LLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADF 680 (840)
Q Consensus 605 ~~~----~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 680 (840)
... ++||||+++|+|.+++.... .+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+||
T Consensus 85 ~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 85 TPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp ETTEEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCC
T ss_pred CCCCcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeec
Confidence 544 99999999999999998764 68999999999999999999999 99999999999999999999999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
|+++................||+.|+|||++.+..++.++||||||+++|||++|+.||..... ....+. .....
T Consensus 161 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---~~~~~~--~~~~~ 235 (311)
T 3ork_A 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP---VSVAYQ--HVRED 235 (311)
T ss_dssp SCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH---HHHHHH--HHHCC
T ss_pred cCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHH--HhcCC
Confidence 9998765433333334456799999999999999999999999999999999999999975311 110000 00000
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH-hhhc
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL-LAEA 810 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~-L~~~ 810 (840)
... ..... ......+.+++.+||+.||++||++.+++++ +...
T Consensus 236 ~~~----~~~~~---~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 236 PIP----PSARH---EGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CCC----HHHHS---TTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CCC----ccccc---CCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 000 00001 1123456778889999999999977666554 4443
No 121
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.4e-40 Score=354.45 Aligned_cols=258 Identities=24% Similarity=0.327 Sum_probs=198.9
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcE----EEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEV----VAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
++|...+.||+|+||+||+|... +++. ||+|.+...... .....+.+|+.++++++||||++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~---------~~~~~~~~e~~~l~~l~h~~iv~~~~~ 83 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR---------QSFQAVTDHMLAIGSLDHAHIVRLLGL 83 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSC---------SCBCSCCHHHHHHHTCCCTTBCCEEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccH---------HHHHHHHHHHHHHhcCCCCCcCeEEEE
Confidence 45778889999999999999654 5554 777776433211 112345679999999999999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecc
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADF 680 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 680 (840)
+. ....++||||+++|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 84 ~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Df 159 (325)
T 3kex_A 84 CP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADF 159 (325)
T ss_dssp EC-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSC
T ss_pred Ec-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCC
Confidence 86 456789999999999999998765578999999999999999999999 99999999999999999999999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhcc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDT 759 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 759 (840)
|+++..... ..........||+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ........ ..
T Consensus 160 g~a~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~---~~ 233 (325)
T 3kex_A 160 GVADLLPPD-DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL--AEVPDLLE---KG 233 (325)
T ss_dssp SGGGGSCCC-TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT--THHHHHHH---TT
T ss_pred CcccccCcc-cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH--HHHHHHHH---cC
Confidence 999876442 22223345678889999999998999999999999999999999 9999976321 11111110 00
Q ss_pred ccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 760 KEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
. ....... ....+.+++.+||+.||.+||++.+++++|+.+..
T Consensus 234 ~-------~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 234 E-------RLAQPQI---CTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp C-------BCCCCTT---BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred C-------CCCCCCc---CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0 0001111 12245668889999999999999999999987654
No 122
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=4.1e-39 Score=339.87 Aligned_cols=259 Identities=28% Similarity=0.491 Sum_probs=202.4
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||+||+|.. .+++.||||++...... .........+.+.+|++++++++||||+++++++.+.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSE---GETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNP 95 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTT---CCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTT
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccc---cchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCC
Confidence 4677888999999999999966 57999999998543321 1111122236789999999999999999999999765
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCCEEEcCCCC-----Cee
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSP--IIHRDIKSTNILLDVNYQ-----PKV 677 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~~~~~-----~kl 677 (840)
. ++||||+++|+|.+.+......+++..+..++.|++.||+|||+ ++ |+||||||+||+++.++. +||
T Consensus 96 ~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 96 P--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp T--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred C--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 5 69999999999999998776689999999999999999999999 88 999999999999988776 999
Q ss_pred ecccchhhhhccCCCCcceecccccccccCccccc--cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhh
Q 003199 678 ADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAY--SSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSI 755 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 755 (840)
+|||+++... .......||+.|+|||.+. ...++.++||||||+++|||++|+.||..............
T Consensus 171 ~Dfg~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-- 242 (287)
T 4f0f_A 171 ADFGLSQQSV------HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI-- 242 (287)
T ss_dssp CCCTTCBCCS------SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH--
T ss_pred CCCCcccccc------ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH--
Confidence 9999987432 2344567999999999983 45578999999999999999999999975322111111100
Q ss_pred hhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 756 KVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
.. ......... .....+.+++.+||+.||++|||+.|+++.|+++
T Consensus 243 -~~------~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 -RE------EGLRPTIPE---DCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp -HH------SCCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred -hc------cCCCCCCCc---ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 00 001111222 2234577788899999999999999999999864
No 123
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-39 Score=349.32 Aligned_cols=267 Identities=28% Similarity=0.390 Sum_probs=202.3
Q ss_pred HHHHHHhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc--CCCCcceee
Q 003199 521 QREILEAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI--RHKNIVKLY 598 (840)
Q Consensus 521 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~ 598 (840)
...+.++|...+.||+|+||.||+|... |+.||||++.... ...+..|.+++... +||||++++
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-------------~~~~~~e~~~~~~~~~~h~~i~~~~ 97 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE-------------EASWFRETEIYQTVLMRHENILGFI 97 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG-------------HHHHHHHHHHHTSTTCCCTTBCCEE
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc-------------cchhhhHHHHHHHHhhcCCCeeeEE
Confidence 4556789999999999999999999876 8999999984321 22344455555554 899999999
Q ss_pred eEEecC----ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCC--------CeEecCCCCCC
Q 003199 599 CYFSSL----YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLS--------PIIHRDIKSTN 666 (840)
Q Consensus 599 ~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~--------~ivH~Dlk~~N 666 (840)
+++... ...++||||+++|+|.+++... .+++..+..++.|++.||+|||+ . +|+||||||+|
T Consensus 98 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~~~~ivH~Dikp~N 172 (337)
T 3mdy_A 98 AADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHT---EIFSTQGKPAIAHRDLKSKN 172 (337)
T ss_dssp EEEEESCGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHS---CBCSTTCBCCEECSCCCGGG
T ss_pred EEEccCCCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHH---hhhhhccCCCEEecccchHH
Confidence 999876 6789999999999999999775 58999999999999999999998 6 99999999999
Q ss_pred EEEcCCCCCeeecccchhhhhccCCC-CcceecccccccccCccccccCCCCcc------ccchhHHHHHHHHHhC----
Q 003199 667 ILLDVNYQPKVADFGIAKVLQARGGK-DSTTTVIAGTYGYLAPEYAYSSKATTK------CDVYSFGVVLMELITG---- 735 (840)
Q Consensus 667 ill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~slG~il~el~tg---- 735 (840)
|+++.++.+||+|||+++........ ........||+.|+|||++.+...+.+ +|||||||++|||++|
T Consensus 173 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~ 252 (337)
T 3mdy_A 173 ILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG 252 (337)
T ss_dssp EEECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred EEECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcc
Confidence 99999999999999999765432111 112234579999999999987766655 9999999999999999
Q ss_pred ------CCCCCCCCCCCcchhhhhhhhhccccchhhhcccccCCC--cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 736 ------RKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGS--FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 736 ------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
+.||.................. ........+.. ..+....+.+++.+||+.||++|||+.|++++|
T Consensus 253 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L 326 (337)
T 3mdy_A 253 GIVEEYQLPYHDLVPSDPSYEDMREIVC------IKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTL 326 (337)
T ss_dssp TBCCCCCCTTTTTSCSSCCHHHHHHHHT------TSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred cccccccccHhhhcCCCCchhhhHHHHh------hhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHH
Confidence 5666543222222111111100 00011111111 125567788999999999999999999999999
Q ss_pred hhcCC
Q 003199 808 AEADP 812 (840)
Q Consensus 808 ~~~~~ 812 (840)
+++..
T Consensus 327 ~~l~~ 331 (337)
T 3mdy_A 327 AKMSE 331 (337)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87643
No 124
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.3e-39 Score=349.94 Aligned_cols=253 Identities=24% Similarity=0.323 Sum_probs=194.2
Q ss_pred HhcCccCeeeccCCcEEEEEEe----CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL----NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
++|+..+.||+|+||.||+|.. .+|+.||||++...... ........+.+|+.+++.++||||+++++++
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 90 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIV------RNAKDTAHTKAERNILEEVKHPFIVDLIYAF 90 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------------HHHHHHHCCCTTBCCEEEEE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhh------hhhhHHHHHHHHHHHHHhCCCCCccceeEEE
Confidence 5788899999999999999976 47899999998543211 1122345678899999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
......++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg 166 (327)
T 3a62_A 91 QTGGKLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFG 166 (327)
T ss_dssp ECSSCEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCS
T ss_pred EcCCEEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCC
Confidence 99999999999999999999998654 68999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
+++..... ........||+.|+|||++.+..++.++||||||+++|||++|+.||..... ..........
T Consensus 167 ~~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~-- 236 (327)
T 3a62_A 167 LCKESIHD---GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-----KKTIDKILKC-- 236 (327)
T ss_dssp CC-------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHT--
T ss_pred cccccccC---CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhC--
Confidence 99764321 2223456799999999999998999999999999999999999999975311 0111000000
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHh
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRP-----TMNEVVQLL 807 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~L 807 (840)
...++..+ ...+.+++.+|++.||++|| ++.|++++-
T Consensus 237 ------~~~~p~~~---~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp 278 (327)
T 3a62_A 237 ------KLNLPPYL---TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHP 278 (327)
T ss_dssp ------CCCCCTTS---CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSG
T ss_pred ------CCCCCCCC---CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCC
Confidence 01112222 34566788899999999999 888998863
No 125
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=5.5e-40 Score=363.82 Aligned_cols=260 Identities=22% Similarity=0.262 Sum_probs=203.7
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||+||+|..+ +++.||||++...... .......+.+|+.++..++||||+++++++.+
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~-------~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-------KRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHH-------HTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhh-------hHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 367889999999999999999765 5889999998532211 11112347889999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+++|+|.+++......+++..+..++.|++.||+|||+ .+||||||||+|||++.++.+||+|||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 999999999999999999998755579999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAY-----SSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
+.... ..........||+.|+|||++. ...++.++|||||||++|||++|+.||.+... ...... ...
T Consensus 223 ~~~~~--~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~----~~~~~~-i~~ 295 (437)
T 4aw2_A 223 LKLME--DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL----VETYGK-IMN 295 (437)
T ss_dssp EECCT--TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHH-HHT
T ss_pred hhccc--CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh----hHHHHh-hhh
Confidence 76533 1222334568999999999986 45789999999999999999999999975311 101100 000
Q ss_pred cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHh
Q 003199 759 TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPAT--RPTMNEVVQLL 807 (840)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~evl~~L 807 (840)
.. .....+.........+.+++.+|+..+|++ ||+++|++++=
T Consensus 296 ~~------~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hp 340 (437)
T 4aw2_A 296 HK------ERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHP 340 (437)
T ss_dssp HH------HHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSG
T ss_pred cc------ccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCC
Confidence 00 000111111123345667778999888888 99999999873
No 126
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.1e-39 Score=362.85 Aligned_cols=324 Identities=21% Similarity=0.209 Sum_probs=213.3
Q ss_pred CEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeec
Q 003199 44 EVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLEL 123 (840)
Q Consensus 44 ~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L 123 (840)
+.++.+++ .+..+|... .++|+.|+|++|.+++..+..|.++++|++|+|++|.|++..|..|..+++|++|+|
T Consensus 14 ~~v~c~~~---~l~~ip~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 87 (477)
T 2id5_A 14 RAVLCHRK---RFVAVPEGI---PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGL 87 (477)
T ss_dssp TEEECCSC---CCSSCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred CEEEeCCC---CcCcCCCCC---CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEEC
Confidence 34555555 444555432 134555566666655555555555555566666555555555555555555555555
Q ss_pred ccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcc
Q 003199 124 YYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTG 203 (840)
Q Consensus 124 ~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 203 (840)
++|+ +....+..|.++++|++|+|++|.++...+..|..+++|++|+|++|.+.+..+..|.++++|++|+|++|++++
T Consensus 88 ~~n~-l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 166 (477)
T 2id5_A 88 RSNR-LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS 166 (477)
T ss_dssp CSSC-CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS
T ss_pred CCCc-CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc
Confidence 5554 222222334555555555555555554445555555555555555555554444455555555555555555554
Q ss_pred cCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccC
Q 003199 204 EVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILS 283 (840)
Q Consensus 204 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 283 (840)
..+..|..+++|+.|+|++|.+ .+..+..|..+++|++|++++|.+.+.+|..+..
T Consensus 167 ~~~~~l~~l~~L~~L~l~~n~i------------------------~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~ 222 (477)
T 2id5_A 167 IPTEALSHLHGLIVLRLRHLNI------------------------NAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY 222 (477)
T ss_dssp CCHHHHTTCTTCCEEEEESCCC------------------------CEECTTCSCSCTTCCEEEEECCTTCCEECTTTTT
T ss_pred cChhHhcccCCCcEEeCCCCcC------------------------cEeChhhcccCcccceeeCCCCccccccCccccc
Confidence 3333444445555555555444 4455556777788888888887776677776666
Q ss_pred CCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhc
Q 003199 284 LPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLM 363 (840)
Q Consensus 284 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 363 (840)
..+|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..|..+++|+.|+
T Consensus 223 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 302 (477)
T 2id5_A 223 GLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLN 302 (477)
T ss_dssp TCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEE
T ss_pred CccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEE
Confidence 67888888888888876667788888888888888888887777888888899999999998888888888899999999
Q ss_pred ccCCccCCCcchhcccccCCCEEECcCccccccCC
Q 003199 364 LQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 364 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 398 (840)
|++|+|++..+..|..+++|+.|+|++|+|++..+
T Consensus 303 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 303 VSGNQLTTLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp CCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred CCCCcCceeCHhHcCCCcccCEEEccCCCccCccc
Confidence 99999988777788889999999999999886544
No 127
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5.4e-40 Score=361.16 Aligned_cols=258 Identities=23% Similarity=0.272 Sum_probs=201.9
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|...+.||+|+||+||+|..+ +++.||+|++...... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~-------~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-------KRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHH-------HTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhh-------hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 357888999999999999999665 6899999998542211 01112347789999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+++|+|.+++... .+++..+..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEecccee
Confidence 99999999999999999999865 58999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCC----CCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSK----ATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDT 759 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 759 (840)
+.... ..........||+.|+|||++.+.. ++.++|||||||++|||++|+.||..... ..........
T Consensus 216 ~~~~~--~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~~i~~~ 288 (410)
T 3v8s_A 216 MKMNK--EGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYSKIMNH 288 (410)
T ss_dssp EECCT--TSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHTH
T ss_pred Eeecc--CCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-----hhHHHHHHhc
Confidence 76533 1122334668999999999987655 78999999999999999999999975311 1111000000
Q ss_pred ccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHhh
Q 003199 760 KEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPAT--RPTMNEVVQLLA 808 (840)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--Rps~~evl~~L~ 808 (840)
.. . . ..+ ........+.+++.+|++.+|.+ ||+++||++|-.
T Consensus 289 ~~---~-~--~~p-~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~ 332 (410)
T 3v8s_A 289 KN---S-L--TFP-DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 332 (410)
T ss_dssp HH---H-C--CCC-TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGG
T ss_pred cc---c-c--cCC-CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCcc
Confidence 00 0 0 011 01112345667778999999988 999999999843
No 128
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.1e-39 Score=339.04 Aligned_cols=252 Identities=23% Similarity=0.352 Sum_probs=201.6
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC-
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL- 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~- 604 (840)
++|...+.||+|+||.||+|... |+.||||++..... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 80 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDW--------STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPP 80 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTC--------CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTT
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEeccccc--------CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCC
Confidence 46788899999999999999886 89999999854321 123356799999999999999999999999877
Q ss_pred -ccceEEEeecCCCChHHHhhcCCC-CCChHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCCEEEcCCCCCeeecc
Q 003199 605 -YCNLLVYEYMPNGNLWDALHKGLV-HLDWPTRHKIAFGVAQGLAYLHHGLLSP--IIHRDIKSTNILLDVNYQPKVADF 680 (840)
Q Consensus 605 -~~~~lV~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~~~~~~kl~Df 680 (840)
...++||||+++|+|.+++..... .+++..+..++.|++.||+|||+ .+ ++||||||+||+++.++.++++||
T Consensus 81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~ 157 (271)
T 3kmu_A 81 APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMA 157 (271)
T ss_dssp SSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGG
T ss_pred CCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEec
Confidence 778999999999999999987642 58999999999999999999999 78 999999999999999999999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCc---cccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATT---KCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV 757 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 757 (840)
|++.... .....||+.|+|||.+.+..++. ++||||||+++|||++|+.||..... ........
T Consensus 158 ~~~~~~~--------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~- 224 (271)
T 3kmu_A 158 DVKFSFQ--------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN----MEIGMKVA- 224 (271)
T ss_dssp GSCCTTS--------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH----HHHHHHHH-
T ss_pred cceeeec--------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh----HHHHHHHH-
Confidence 8875432 22346899999999988765444 89999999999999999999975311 00000000
Q ss_pred ccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 758 DTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
........... ....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 225 ------~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 225 ------LEGLRPTIPPG---ISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ 269 (271)
T ss_dssp ------HSCCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred ------hcCCCCCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence 00011112222 2345677888999999999999999999998865
No 129
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-39 Score=355.77 Aligned_cols=261 Identities=25% Similarity=0.321 Sum_probs=193.8
Q ss_pred cCccCeeeccCCcEEEEEEeC--CC--cEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 528 MTEKNKVGQGGSGTVYKIDLN--SG--EVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 528 ~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
|...+.||+|+||.||+|... ++ ..||||.+.... .....+.+.+|+.++++++||||+++++++..
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~ 161 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---------DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR 161 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS---------CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECC
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC---------CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEc
Confidence 556678999999999999653 22 368999874322 12335678999999999999999999998754
Q ss_pred -CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccc
Q 003199 604 -LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGI 682 (840)
Q Consensus 604 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 682 (840)
....++||||+++|+|.+++......+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+
T Consensus 162 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~ 238 (373)
T 3c1x_A 162 SEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGL 238 (373)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC--
T ss_pred CCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeeccc
Confidence 567799999999999999998776678999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhccCCC-CcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 683 AKVLQARGGK-DSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 683 a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
++........ ........+|+.|+|||.+.+..++.++||||||+++|||++ |.+||...... ...... ....
T Consensus 239 a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~---~~~~ 313 (373)
T 3c1x_A 239 ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL---LQGR 313 (373)
T ss_dssp -------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHH---HTTC
T ss_pred cccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHH---HcCC
Confidence 9876432111 112234567889999999999999999999999999999999 77787653211 111111 0000
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCC
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRF 815 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 815 (840)
....+. .....+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 314 -------~~~~p~---~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 314 -------RLLQPE---YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp -------CCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred -------CCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 001111 123457778889999999999999999999987654443
No 130
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.4e-39 Score=348.14 Aligned_cols=259 Identities=26% Similarity=0.371 Sum_probs=207.1
Q ss_pred HhcCccCeeeccCCcEEEEEEe------CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL------NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLY 598 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 598 (840)
++|...+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.+++++ +||||++++
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l~~h~~i~~~~ 93 (313)
T 1t46_A 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH---------LTEREALMSELKVLSYLGNHMNIVNLL 93 (313)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC---------HHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh---------HHHHHHHHHHHHHHhhcccCCCeeeEE
Confidence 5688889999999999999964 3578999999853321 22356789999999999 899999999
Q ss_pred eEEecCccceEEEeecCCCChHHHhhcCCC-----------------CCChHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 003199 599 CYFSSLYCNLLVYEYMPNGNLWDALHKGLV-----------------HLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRD 661 (840)
Q Consensus 599 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 661 (840)
+++......++||||+++|+|.+++..... .+++..+..++.|++.||+|||+ ++|+|||
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~d 170 (313)
T 1t46_A 94 GACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRD 170 (313)
T ss_dssp EEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred EEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCC
Confidence 999999999999999999999999976532 48999999999999999999999 9999999
Q ss_pred CCCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 003199 662 IKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVE 740 (840)
Q Consensus 662 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~ 740 (840)
|||+||+++.++.+||+|||+++...... .........||+.|+|||.+.+..++.++||||||+++|||++ |+.||.
T Consensus 171 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 249 (313)
T 1t46_A 171 LAARNILLTHGRITKICDFGLARDIKNDS-NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYP 249 (313)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCTTSCT-TSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred CccceEEEcCCCCEEEccccccccccccc-cceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999998764421 1122334567889999999999999999999999999999999 999997
Q ss_pred CCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 741 DDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
..... ....... .......... .....+.+++.+|++.||.+|||+.|++++|+++.
T Consensus 250 ~~~~~-~~~~~~~----------~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 250 GMPVD-SKFYKMI----------KEGFRMLSPE---HAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp TCCSS-HHHHHHH----------HHTCCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cccch-hHHHHHh----------ccCCCCCCcc---cCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 53211 1111000 0001111111 22345677888999999999999999999998653
No 131
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=345.75 Aligned_cols=259 Identities=24% Similarity=0.323 Sum_probs=194.3
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccC----------------chhhHHHHHHHHHHHHHHhc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSAS----------------DTDQLQLDKGLKTEVETLGN 588 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~----------------~~~~~~~~~~~~~E~~~l~~ 588 (840)
++|+..+.||+|+||.||+|.. .+|+.||||++.......... ........+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 4688889999999999999965 578999999986543211000 00011224568899999999
Q ss_pred cCCCCcceeeeEEec--CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCC
Q 003199 589 IRHKNIVKLYCYFSS--LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTN 666 (840)
Q Consensus 589 l~h~niv~l~~~~~~--~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~N 666 (840)
++||||+++++++.+ ....++||||+++++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~N 167 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK--PLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSN 167 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHH
Confidence 999999999999986 56789999999999998876543 68999999999999999999999 999999999999
Q ss_pred EEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCC---CCccccchhHHHHHHHHHhCCCCCCCCC
Q 003199 667 ILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSK---ATTKCDVYSFGVVLMELITGRKPVEDDF 743 (840)
Q Consensus 667 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~tg~~p~~~~~ 743 (840)
|+++.++.+||+|||+++.... .........||+.|+|||.+.+.. ++.++|||||||++|||++|+.||....
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKG---SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSS---SSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EEECCCCCEEEecCCCcccccc---ccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999976543 122334567999999999987655 3788999999999999999999997531
Q ss_pred CCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 744 GDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
...+........ .. . +........+.+++.+||+.||++|||+.|++++
T Consensus 245 -----~~~~~~~~~~~~------~~--~-~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 245 -----IMCLHSKIKSQA------LE--F-PDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp -----HHHHHHHHHHCC------CC--C-CSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTC
T ss_pred -----HHHHHHHHhccc------CC--C-CCccccCHHHHHHHHHHhhcChhhCCCHHHHhcC
Confidence 111111000000 00 0 0111223456778889999999999999999865
No 132
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2e-39 Score=352.86 Aligned_cols=253 Identities=24% Similarity=0.306 Sum_probs=191.3
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|...+.||+|+||+||+|... +|+.||||++..... ..+.+.+|+.+++.++||||+++++++.+.
T Consensus 20 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----------~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 88 (361)
T 3uc3_A 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-----------IDENVQREIINHRSLRHPNIVRFKEVILTP 88 (361)
T ss_dssp TTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-----------SCHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-----------ccHHHHHHHHHHHhCCCCCCCcEEEEEeeC
Confidence 46888999999999999999665 799999999854321 124577899999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC--Ceeecccc
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ--PKVADFGI 682 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~--~kl~Dfg~ 682 (840)
...++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++. +||+|||+
T Consensus 89 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~ 164 (361)
T 3uc3_A 89 THLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGY 164 (361)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCC
T ss_pred CEEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCc
Confidence 99999999999999999997654 69999999999999999999999 99999999999999987765 99999999
Q ss_pred hhhhhccCCCCcceecccccccccCccccccCCCCcc-ccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 683 AKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTK-CDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 683 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
++.... ........||+.|+|||++.+..++.+ +||||+||++|||++|+.||........ .............
T Consensus 165 a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~~~~~~~~~~~~ 239 (361)
T 3uc3_A 165 SKSSVL----HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD-YRKTIQRILSVKY 239 (361)
T ss_dssp C-------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCC-HHHHHHHHHTTCC
T ss_pred cccccc----cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHH-HHHHHHHHhcCCC
Confidence 975422 222344579999999999988777655 8999999999999999999976422111 1111111110000
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
..+. .......+.+++.+|++.||++|||+.|++++-
T Consensus 240 --------~~~~-~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp 276 (361)
T 3uc3_A 240 --------SIPD-DIRISPECCHLISRIFVADPATRISIPEIKTHS 276 (361)
T ss_dssp --------CCCT-TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSH
T ss_pred --------CCCC-cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCc
Confidence 0111 011234567788899999999999999999884
No 133
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3e-39 Score=340.35 Aligned_cols=256 Identities=22% Similarity=0.320 Sum_probs=204.1
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 76 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--------ARDFQKLEREARICRKLQHPNIVRLHDSIQE 76 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC--------HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCC--------HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc
Confidence 35788899999999999999965 46899999998543321 2334678899999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC---Ceeecc
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ---PKVADF 680 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~Df 680 (840)
....++||||+++++|.+.+.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+||
T Consensus 77 ~~~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Df 152 (284)
T 3kk8_A 77 ESFHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADF 152 (284)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCC
T ss_pred CCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeec
Confidence 999999999999999999887764 68999999999999999999999 99999999999999986655 999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
|++..... ........||+.|+|||.+.+..++.++||||+|+++|||++|+.||..... ... .........
T Consensus 153 g~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~--~~~~~~~~~ 224 (284)
T 3kk8_A 153 GLAIEVND----SEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRL--YAQIKAGAY 224 (284)
T ss_dssp TTCEECCS----SCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHH--HHHHHHTCC
T ss_pred eeeEEccc----CccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch--hHH--HHHHHhccc
Confidence 99976532 2233456799999999999999999999999999999999999999975311 111 111000000
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
....+........+.+++.+|++.||++|||+.|++++-.
T Consensus 225 --------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (284)
T 3kk8_A 225 --------DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264 (284)
T ss_dssp --------CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHH
T ss_pred --------cCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCcc
Confidence 0011111223345677888999999999999999998643
No 134
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.8e-39 Score=350.43 Aligned_cols=259 Identities=25% Similarity=0.346 Sum_probs=205.0
Q ss_pred HhcCccCeeeccCCcEEEEEEe--------CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcce
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL--------NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVK 596 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 596 (840)
++|+..+.||+|+||.||+|.. .++..||||++.... .....+.+.+|+++++++ +||||++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~~hp~iv~ 105 (334)
T 2pvf_A 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA---------TEKDLSDLVSEMEMMKMIGKHKNIIN 105 (334)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC---------CHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred hHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC---------cHHHHHHHHHHHHHHHHhhcCCCEee
Confidence 5788889999999999999975 356789999985332 123356788999999999 8999999
Q ss_pred eeeEEecCccceEEEeecCCCChHHHhhcCC---------------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 003199 597 LYCYFSSLYCNLLVYEYMPNGNLWDALHKGL---------------VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRD 661 (840)
Q Consensus 597 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 661 (840)
+++++.+....++||||+++|+|.+++.... ..+++.++..++.|++.||+|||+ .+|+|||
T Consensus 106 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~D 182 (334)
T 2pvf_A 106 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRD 182 (334)
T ss_dssp EEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSC
T ss_pred EEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCC
Confidence 9999999999999999999999999998653 248999999999999999999999 9999999
Q ss_pred CCCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 003199 662 IKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVE 740 (840)
Q Consensus 662 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~ 740 (840)
|||+||+++.++.+||+|||+++...... .........+|+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 183 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 261 (334)
T 2pvf_A 183 LAARNVLVTENNVMKIADFGLARDINNID-YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYP 261 (334)
T ss_dssp CSGGGEEECTTCCEEECCCTTCEECTTTS-SEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CccceEEEcCCCCEEEccccccccccccc-cccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcC
Confidence 99999999999999999999997654321 1122334467889999999988889999999999999999999 999997
Q ss_pred CCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 741 DDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
+.. .... ..... ......... .....+.+++.+||+.||++|||+.|++++|+++..
T Consensus 262 ~~~--~~~~---~~~~~-------~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 262 GIP--VEEL---FKLLK-------EGHRMDKPA---NCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp TCC--HHHH---HHHHH-------HTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCC--HHHH---HHHHh-------cCCCCCCCc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 531 1111 10000 000011111 223456778889999999999999999999987643
No 135
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-39 Score=363.36 Aligned_cols=250 Identities=26% Similarity=0.397 Sum_probs=202.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
..|...+.||+|+||.||+|... +|+.||||++..... ........+.+|+.+++.++||||+++++++...
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~-------~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~ 88 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKI-------RSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTP 88 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHH-------HHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhc-------cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence 46788899999999999999665 799999999853321 1122346788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~ 164 (476)
T 2y94_A 89 SDIFMVMEYVSGGELFDYICKNG-RLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSN 164 (476)
T ss_dssp SEEEEEEECCSSEEHHHHTTSSS-SCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred CEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchh
Confidence 99999999999999999998654 68999999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCccccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKA-TTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
.... ........||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+... ... ........
T Consensus 165 ~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~--~~~---~~~i~~~~--- 232 (476)
T 2y94_A 165 MMSD----GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV--PTL---FKKICDGI--- 232 (476)
T ss_dssp ECCT----TCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS--HHH---HHHHHTTC---
T ss_pred hccc----cccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH--HHH---HHHHhcCC---
Confidence 7532 222345679999999999988765 7899999999999999999999975311 111 11000000
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
...+.. ....+.+++.+|++.||++|||+.|++++
T Consensus 233 -----~~~p~~---~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 233 -----FYTPQY---LNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp -----CCCCTT---CCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred -----cCCCcc---CCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 001111 22456778889999999999999999986
No 136
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1e-39 Score=352.69 Aligned_cols=252 Identities=25% Similarity=0.287 Sum_probs=202.5
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEe
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFS 602 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 602 (840)
.++|...+.||+|+||+||+|..+ +|+.||||++...... .....+.+..|..++..+ .||+|+++++++.
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-------~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~ 91 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-------QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ 91 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHH-------HTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-------cchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE
Confidence 457888999999999999999765 5889999998543211 112345678899999988 7999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccc
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGI 682 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 682 (840)
+....++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 92 ~~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~ 167 (353)
T 2i0e_A 92 TMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGM 167 (353)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred cCCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCc
Confidence 9999999999999999999998754 68999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 683 AKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 683 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
++.... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.. . ..........
T Consensus 168 a~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~---~--~~~~~~i~~~--- 236 (353)
T 2i0e_A 168 CKENIW---DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED---E--DELFQSIMEH--- 236 (353)
T ss_dssp CBCCCC---TTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS---H--HHHHHHHHHC---
T ss_pred cccccc---CCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC---H--HHHHHHHHhC---
Confidence 975322 1223445689999999999999999999999999999999999999997531 1 1111111100
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPT-----MNEVVQL 806 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-----~~evl~~ 806 (840)
....+.. ....+.+++.+|++.||++||+ +.+++++
T Consensus 237 -----~~~~p~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 237 -----NVAYPKS---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp -----CCCCCTT---SCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred -----CCCCCCC---CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 0111222 2345667888999999999995 6888776
No 137
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.1e-39 Score=356.26 Aligned_cols=276 Identities=17% Similarity=0.234 Sum_probs=204.9
Q ss_pred HhcCccCeeeccCCcEEEEEEeCC------CcEEEEEEecccccccccC-chhhHHHHHHHHHHHHHHhccCCCCcceee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNS------GEVVAVKKLWSQRTKVSAS-DTDQLQLDKGLKTEVETLGNIRHKNIVKLY 598 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 598 (840)
++|...+.||+|+||.||+|.... ++.||||++.......... ..........+..|+..++.++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 468888999999999999997754 4789999985443110000 000011123455677788899999999999
Q ss_pred eEEecC----ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEc--CC
Q 003199 599 CYFSSL----YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLD--VN 672 (840)
Q Consensus 599 ~~~~~~----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~--~~ 672 (840)
+++... ...++||||+ +++|.+++......+++.++..++.||+.||+|||+ ++|+||||||+|||++ .+
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESSCT
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecCCC
Confidence 998764 4579999999 999999998876679999999999999999999999 9999999999999999 88
Q ss_pred CCCeeecccchhhhhccCCCC----cceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcc
Q 003199 673 YQPKVADFGIAKVLQARGGKD----STTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKN 748 (840)
Q Consensus 673 ~~~kl~Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 748 (840)
+.+||+|||+++.+....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... ..
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~-~~ 269 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD-PK 269 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-HH
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-HH
Confidence 999999999998764422111 1223456999999999999999999999999999999999999999753222 11
Q ss_pred hhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 749 IIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
...+.. ...........+..+.. ......+.+++..||+.||++||++.++++.|+++
T Consensus 270 ~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~ 327 (364)
T 3op5_A 270 YVRDSK--IRYRENIASLMDKCFPA--ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQG 327 (364)
T ss_dssp HHHHHH--HHHHHCHHHHHHHHSCT--TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHHH--HHhhhhHHHHHHHhccc--ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 111111 11111122333322211 11134567788899999999999999999998754
No 138
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=3.8e-39 Score=355.53 Aligned_cols=274 Identities=20% Similarity=0.262 Sum_probs=205.7
Q ss_pred HhcCccCeeecc--CCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 526 EAMTEKNKVGQG--GSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 526 ~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
.+|+..+.||+| +||.||+|... +|+.||||++..... .....+.+.+|+.+++.++||||+++++++.
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 96 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC--------SNEMVTFLQGELHVSKLFNHPNIVPYRATFI 96 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS--------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc--------ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE
Confidence 468889999999 99999999665 799999999854321 1234577889999999999999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKG-LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
+....++||||+++|+|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg 173 (389)
T 3gni_B 97 ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLR 173 (389)
T ss_dssp ETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGG
T ss_pred ECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccc
Confidence 999999999999999999999765 2468999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCC----CcceecccccccccCcccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhh
Q 003199 682 IAKVLQARGGK----DSTTTVIAGTYGYLAPEYAYS--SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSI 755 (840)
Q Consensus 682 ~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 755 (840)
.+......+.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+........ .....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~ 252 (389)
T 3gni_B 174 SNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLNG 252 (389)
T ss_dssp GCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH-HC---
T ss_pred cceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHhcC
Confidence 98655332111 112233478999999999987 578999999999999999999999997632221110 00000
Q ss_pred hhcc--------ccc-------------hhhhcc----------cccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 003199 756 KVDT--------KEG-------------IMEVLD----------KKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVV 804 (840)
Q Consensus 756 ~~~~--------~~~-------------~~~~~~----------~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl 804 (840)
.... .+. ...... ....+........+.+++.+||+.||++|||+.|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell 332 (389)
T 3gni_B 253 TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLL 332 (389)
T ss_dssp -----------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred CCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 0000 000 000000 000001112235678899999999999999999999
Q ss_pred HH--hhhcC
Q 003199 805 QL--LAEAD 811 (840)
Q Consensus 805 ~~--L~~~~ 811 (840)
++ +.++.
T Consensus 333 ~hp~f~~~~ 341 (389)
T 3gni_B 333 NHSFFKQIK 341 (389)
T ss_dssp TSGGGGGC-
T ss_pred cCHHHHHHh
Confidence 87 44443
No 139
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=2.7e-39 Score=340.61 Aligned_cols=254 Identities=26% Similarity=0.379 Sum_probs=197.2
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
++.+.|...+.||+|+||.||+|.. .++..||+|++...... ...+.+.+|++++++++||||+++++++
T Consensus 19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~---------~~~~~~~~E~~~l~~l~hp~iv~~~~~~ 89 (285)
T 3is5_A 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQ---------VPMEQIEAEIEVLKSLDHPNIIKIFEVF 89 (285)
T ss_dssp CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCC---------SCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccc---------hhHHHHHHHHHHHHhCCCchHHhHHHhe
Confidence 4567899999999999999999965 47899999998544321 1246788999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcC---CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE---cCCCCC
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKG---LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL---DVNYQP 675 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~ 675 (840)
.+....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~ 166 (285)
T 3is5_A 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPI 166 (285)
T ss_dssp ECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCE
T ss_pred ecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCE
Confidence 9999999999999999999988543 2478999999999999999999999 999999999999999 456789
Q ss_pred eeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhh
Q 003199 676 KVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSI 755 (840)
Q Consensus 676 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 755 (840)
||+|||+++.... ........||+.|+|||.+. ..++.++||||||+++|||++|+.||..... . .....
T Consensus 167 kl~Dfg~a~~~~~----~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~--~---~~~~~ 236 (285)
T 3is5_A 167 KIIDFGLAELFKS----DEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL--E---EVQQK 236 (285)
T ss_dssp EECCCCCCCC--------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHH
T ss_pred EEEeeecceecCC----cccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH--H---HHHhh
Confidence 9999999976533 22234567999999999875 5789999999999999999999999975310 0 00000
Q ss_pred hhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 756 KVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.. ................+.+++.+|++.||++|||+.|++++
T Consensus 237 -~~-------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 237 -AT-------YKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp -HH-------HCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred -hc-------cCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00 00011111111123456778889999999999999999875
No 140
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=376.82 Aligned_cols=251 Identities=22% Similarity=0.278 Sum_probs=196.1
Q ss_pred eeeccCCcEEEEEEeC---CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCccceE
Q 003199 533 KVGQGGSGTVYKIDLN---SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLYCNLL 609 (840)
Q Consensus 533 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l 609 (840)
.||+|+||.||+|.+. ++..||||++..... ....+.+.+|++++++++|||||++++++.. +..++
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~---------~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~l 412 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE---------KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML 412 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS---------STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEE
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC---------hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEE
Confidence 7999999999999653 466899999854321 1235678999999999999999999999976 56899
Q ss_pred EEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhhhhcc
Q 003199 610 VYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQAR 689 (840)
Q Consensus 610 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 689 (840)
||||+++|+|.+++......+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 413 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~ 489 (613)
T 2ozo_A 413 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD 489 (613)
T ss_dssp EEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred EEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence 999999999999998766679999999999999999999999 99999999999999999999999999999876432
Q ss_pred CCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccchhhhcc
Q 003199 690 GGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLD 768 (840)
Q Consensus 690 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 768 (840)
...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+ ..
T Consensus 490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~i-------------~~ 554 (613)
T 2ozo_A 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVMAFI-------------EQ 554 (613)
T ss_dssp ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HHHHHHH-------------HT
T ss_pred CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHH-------------Hc
Confidence 222222233456789999999998999999999999999999998 9999976321 1111110 00
Q ss_pred cccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 769 KKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 769 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
.............+.+++.+||+.||++||++.++++.|+++.
T Consensus 555 ~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 597 (613)
T 2ozo_A 555 GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597 (613)
T ss_dssp TCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 0011111223456778888999999999999999999998753
No 141
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.4e-39 Score=340.48 Aligned_cols=255 Identities=24% Similarity=0.304 Sum_probs=200.2
Q ss_pred HhcCccCeeeccCCcEEEEEEeCC----CcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNS----GEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
++|...+.||+|+||.||+|.... +..||||++.... .....+.+.+|+.++++++||||+++++++
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 82 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC---------TLDNKEKFMSEAVIMKNLDHPHIVKLIGII 82 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS---------CHHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc---------CchHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 567888999999999999996542 3469999885432 123356789999999999999999999998
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
.+. ..++||||+++++|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 83 ~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg 158 (281)
T 3cc6_A 83 EEE-PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFG 158 (281)
T ss_dssp CSS-SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCC
T ss_pred cCC-CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccC
Confidence 754 5689999999999999998766679999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
++...... .........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... ........ .
T Consensus 159 ~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~~~~~---~-- 229 (281)
T 3cc6_A 159 LSRYIEDE--DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVLE---K-- 229 (281)
T ss_dssp GGGCC-----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHHHHHH---H--
T ss_pred CCcccccc--cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHHHHHh---c--
Confidence 99876432 1122334567889999999988899999999999999999998 9999975321 11111100 0
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
......... ....+.+++.+|++.||++|||+.|++++|+++
T Consensus 230 -----~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 230 -----GDRLPKPDL---CPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp -----TCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----CCCCCCCCC---CCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 000011111 234567788899999999999999999999865
No 142
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.6e-39 Score=339.83 Aligned_cols=252 Identities=29% Similarity=0.445 Sum_probs=200.9
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||.||+|... +++.||||++.... .........+.+|++++++++||||+++++++.+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ-------LEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD 80 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-------HHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccc-------cchhhHHHHHHHHHHHHHcCCCCCCcchhheEec
Confidence 357888999999999999999554 67899999984322 1122335678899999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~ 156 (279)
T 3fdn_A 81 ATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWS 156 (279)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEE
T ss_pred CCEEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEecccc
Confidence 999999999999999999998754 68999999999999999999999 99999999999999999999999999998
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
..... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.... ....+... .
T Consensus 157 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~-~------ 220 (279)
T 3fdn_A 157 VHAPS-----SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRI-S------ 220 (279)
T ss_dssp SCC-------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS----HHHHHHHH-H------
T ss_pred ccCCc-----ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc----HHHHHHHH-H------
Confidence 65422 22344578999999999999899999999999999999999999997531 00000000 0
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
......+... ...+.+++.+|++.||++|||+.|++++-.
T Consensus 221 --~~~~~~~~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~h~~ 260 (279)
T 3fdn_A 221 --RVEFTFPDFV---TEGARDLISRLLKHNPSQRPMLREVLEHPW 260 (279)
T ss_dssp --HTCCCCCTTS---CHHHHHHHHHHCCSSGGGSCCHHHHHHCHH
T ss_pred --hCCCCCCCcC---CHHHHHHHHHHhccChhhCCCHHHHhhCcc
Confidence 0111112222 245667888999999999999999998843
No 143
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.5e-39 Score=343.79 Aligned_cols=257 Identities=25% Similarity=0.307 Sum_probs=200.1
Q ss_pred HhcCccC-eeeccCCcEEEEEEe---CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 526 EAMTEKN-KVGQGGSGTVYKIDL---NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 526 ~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
++|...+ .||+|+||.||+|.. .+++.||||++..... .....+.+.+|+++++.++||||+++++++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 87 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--------DPALKDELLAEANVMQQLDNPYIVRMIGIC 87 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccccc--------CHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 3566666 899999999999954 3468899999854321 123356789999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
.....++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 88 -~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg 162 (291)
T 1xbb_A 88 -EAESWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFG 162 (291)
T ss_dssp -ESSSEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred -CCCCcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCC
Confidence 5567889999999999999998764 68999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
+++................+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ....... ..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~---~~-- 235 (291)
T 1xbb_A 163 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAML---EK-- 235 (291)
T ss_dssp TCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHH---HT--
T ss_pred cceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH---Hc--
Confidence 99876432222222333456789999999988889999999999999999999 9999975311 1111000 00
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
........ .....+.+++.+||+.||++||++.++++.|+++
T Consensus 236 -----~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 236 -----GERMGCPA---GCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp -----TCCCCCCT---TCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred -----CCCCCCCC---CCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 00011112 2334677788899999999999999999999875
No 144
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.8e-39 Score=341.08 Aligned_cols=254 Identities=25% Similarity=0.380 Sum_probs=203.3
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|...+.||+|+||.||+|...++..||||++..... ..+.+.+|++++++++||||+++++++.+ +
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~ 80 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-----------SPDAFLAEANLMKQLQHQRLVRLYAVVTQ-E 80 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-----------cHHHHHHHHHHHHhCCCcCcceEEEEEcC-C
Confidence 56788899999999999999988888999999854321 13568899999999999999999999874 4
Q ss_pred cceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 606 CNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
..++||||+++++|.+++.... ..+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++.
T Consensus 81 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 157 (279)
T 1qpc_A 81 PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLAR 157 (279)
T ss_dssp SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccc
Confidence 5799999999999999997542 258999999999999999999999 999999999999999999999999999997
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
..... .........+++.|+|||.+.+..++.++||||||+++|||++ |+.||.+... ... ......
T Consensus 158 ~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~---~~~~~~----- 225 (279)
T 1qpc_A 158 LIEDN--EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEV---IQNLER----- 225 (279)
T ss_dssp ECSSS--CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHH---HHHHHT-----
T ss_pred cccCc--ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--HHH---HHHHhc-----
Confidence 76431 1122234456789999999988889999999999999999999 9999975311 111 100000
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
........ .....+.+++.+|++.||++|||+.++++.|+++.
T Consensus 226 --~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 226 --GYRMVRPD---NCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp --TCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --ccCCCCcc---cccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 00111111 22346777888999999999999999999998754
No 145
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=339.42 Aligned_cols=253 Identities=26% Similarity=0.431 Sum_probs=184.0
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|...+.||+|+||.||+|.. .+|+.||||++..... ......+.+.+|+.++++++||||+++++++.+
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 82 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM-------YKAGMVQRVQNEVKIHCQLKHPSILELYNYFED 82 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-------HHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhh-------hhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc
Confidence 35788899999999999999965 5799999999843221 112234678899999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+++++|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 83 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~ 159 (278)
T 3cok_A 83 SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLA 159 (278)
T ss_dssp SSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTC
T ss_pred CCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecce
Confidence 999999999999999999998766679999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
...... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||........ . . . ..
T Consensus 160 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~-~--~-~~------ 225 (278)
T 3cok_A 160 TQLKMP---HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT-L-N--K-VV------ 225 (278)
T ss_dssp EECC-------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------CC------
T ss_pred eeccCC---CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH-H-H--H-Hh------
Confidence 765321 1122345789999999999988899999999999999999999999975321110 0 0 0 00
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
..+...+.. ....+.+++.+|++.||++|||+.+++++
T Consensus 226 --~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 226 --LADYEMPSF---LSIEAKDLIHQLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp --SSCCCCCTT---SCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred --hcccCCccc---cCHHHHHHHHHHcccCHhhCCCHHHHhcC
Confidence 000111122 23456678889999999999999999875
No 146
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.9e-39 Score=342.74 Aligned_cols=255 Identities=25% Similarity=0.312 Sum_probs=207.0
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
.+|+..+.||+|+||.||+|... ++..||||++.... ...+.+.+|++++++++||||+++++++.+.
T Consensus 13 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 81 (288)
T 3kfa_A 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-----------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTRE 81 (288)
T ss_dssp GGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-----------THHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-----------HHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence 56788899999999999999665 58899999985322 2246788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 605 YCNLLVYEYMPNGNLWDALHKG-LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
...++||||+++++|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 82 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 158 (288)
T 3kfa_A 82 PPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLS 158 (288)
T ss_dssp SSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGG
T ss_pred CCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccc
Confidence 9999999999999999999864 3458999999999999999999999 89999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
..... ..........+|+.|+|||.+.+..++.++||||||+++|||++ |..||.... ........
T Consensus 159 ~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~--~~~~~~~~--------- 225 (288)
T 3kfa_A 159 RLMTG--DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELL--------- 225 (288)
T ss_dssp GTSCS--SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHH---------
T ss_pred eeccC--CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHH---------
Confidence 87643 22233344567889999999998899999999999999999999 999997531 11111100
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
.......... .....+.+++.+|++.||.+|||+.++++.|+.+.
T Consensus 226 -~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 226 -EKDYRMERPE---GCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp -HTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -hccCCCCCCC---CCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 0001111111 22345777888999999999999999999998653
No 147
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=3.8e-39 Score=345.78 Aligned_cols=261 Identities=22% Similarity=0.276 Sum_probs=206.7
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
.+.+.|...+.||+|+||.||+|... +|+.||||++.......... ....+.+.+|+.++++++||||+++++++
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 84 (321)
T 2a2a_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR----GVSREEIEREVSILRQVLHHNVITLHDVY 84 (321)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSS----SBCHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEeccccccccc----chhHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 35678999999999999999999654 78999999986544321111 11246788999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCC----CCee
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNY----QPKV 677 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl 677 (840)
.+....++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl 160 (321)
T 2a2a_A 85 ENRTDVVLILELVSGGELFDFLAQKE-SLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKL 160 (321)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHTCS-CEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred ecCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEE
Confidence 99999999999999999999998754 68999999999999999999999 9999999999999999887 7999
Q ss_pred ecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh
Q 003199 678 ADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV 757 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 757 (840)
+|||+++.... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ....... .
T Consensus 161 ~Dfg~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~i-~ 231 (321)
T 2a2a_A 161 IDFGLAHEIED----GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK----QETLANI-T 231 (321)
T ss_dssp CCCTTCEECCT----TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHHHHH-H
T ss_pred ccCccceecCc----cccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH----HHHHHHH-H
Confidence 99999976533 2223445799999999999988999999999999999999999999975311 0000000 0
Q ss_pred ccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 758 DTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.... ..+.... ......+.+++.+|++.||++|||+.|++++-
T Consensus 232 ~~~~----~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp 274 (321)
T 2a2a_A 232 SVSY----DFDEEFF---SHTSELAKDFIRKLLVKETRKRLTIQEALRHP 274 (321)
T ss_dssp TTCC----CCCHHHH---TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHST
T ss_pred hccc----ccChhhh---cccCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 0000 0000000 11234567788899999999999999999863
No 148
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.7e-39 Score=348.39 Aligned_cols=248 Identities=22% Similarity=0.344 Sum_probs=179.4
Q ss_pred cCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-CCCcceeeeEEecCccce
Q 003199 531 KNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-HKNIVKLYCYFSSLYCNL 608 (840)
Q Consensus 531 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 608 (840)
.+.||+|+||.||+|... +|+.||||++... ....+.+|+.+++.+. ||||+++++++.+....+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~ 82 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTF 82 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-------------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEE
Confidence 378999999999999664 7899999998422 2356778999999997 999999999999999999
Q ss_pred EEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCC---CCeeecccchhh
Q 003199 609 LVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNY---QPKVADFGIAKV 685 (840)
Q Consensus 609 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~kl~Dfg~a~~ 685 (840)
+||||+++|+|.+++.... .+++.++..++.|++.||+|||+ ++|+||||||+||+++.++ .+||+|||+++.
T Consensus 83 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~ 158 (325)
T 3kn6_A 83 LVMELLNGGELFERIKKKK-HFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL 158 (325)
T ss_dssp EEECCCCSCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEE
T ss_pred EEEEccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEecccccee
Confidence 9999999999999998764 79999999999999999999999 9999999999999998765 799999999976
Q ss_pred hhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCC--cchhhhhhhhhccccch
Q 003199 686 LQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDN--KNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 686 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~ 763 (840)
... .........||+.|+|||++.+..++.++|||||||++|||++|+.||....... .......
T Consensus 159 ~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~---------- 225 (325)
T 3kn6_A 159 KPP---DNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM---------- 225 (325)
T ss_dssp CCC-------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHH----------
T ss_pred cCC---CCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHH----------
Confidence 532 1223345678999999999999999999999999999999999999997642211 0111100
Q ss_pred hhhcccccC--C-CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 764 MEVLDKKLS--G-SFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 764 ~~~~~~~~~--~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
..+...... . .+......+.+++.+|++.||++|||+.|++++-.
T Consensus 226 ~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w 273 (325)
T 3kn6_A 226 KKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEW 273 (325)
T ss_dssp HHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGG
T ss_pred HHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChh
Confidence 111111111 1 11223456788889999999999999999987643
No 149
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.4e-38 Score=356.02 Aligned_cols=369 Identities=26% Similarity=0.281 Sum_probs=271.2
Q ss_pred ccccccccCCC-CCCCCCCCEEecCCCcCcccCCccccCCCCC-------------CEEeCCCCCCCccCCCCccccccc
Q 003199 2 SFMYLTGTLPD-FSPMQNLRRLDLSNNLFTGQFPLSVFNLTNL-------------EVLSFNENPGFKLWKLPESSIFRL 67 (840)
Q Consensus 2 ~~~~~~~~~~~-~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L-------------~~L~L~~N~~~~l~~l~~~~~~~l 67 (840)
+.+.+ |.+|+ |+.+++|++|+|++|.+++.+|..++.+.+| ++|++++| .+..+|. -.
T Consensus 19 ~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~---~l~~lp~----~~ 90 (454)
T 1jl5_A 19 HSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNL---GLSSLPE----LP 90 (454)
T ss_dssp ----------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTS---CCSCCCS----CC
T ss_pred ccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCC---ccccCCC----Cc
Confidence 45666 78885 9999999999999999999999999988865 99999999 5555554 13
Q ss_pred ccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeee
Q 003199 68 TKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLD 147 (840)
Q Consensus 68 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~ 147 (840)
++|+.|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|+ +. .+| .++++++|++|+
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~-l~-~lp-~~~~l~~L~~L~ 159 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQ-LE-KLP-ELQNSSFLKIID 159 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSC-CS-SCC-CCTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCC-CC-CCc-ccCCCCCCCEEE
Confidence 789999999999986 5653 3789999999999984 3322 2789999999998 33 477 599999999999
Q ss_pred ccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccc
Q 003199 148 MSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSG 227 (840)
Q Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 227 (840)
+++|++++ +|.. .++|++|++++|++++. | .+.++++|++|++++|++++ +|... ++|++|++++|+++
T Consensus 160 l~~N~l~~-lp~~---~~~L~~L~L~~n~l~~l-~-~~~~l~~L~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~- 228 (454)
T 1jl5_A 160 VDNNSLKK-LPDL---PPSLEFIAAGNNQLEEL-P-ELQNLPFLTAIYADNNSLKK-LPDLP---LSLESIVAGNNILE- 228 (454)
T ss_dssp CCSSCCSC-CCCC---CTTCCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSS-CCCCC---TTCCEEECCSSCCS-
T ss_pred CCCCcCcc-cCCC---cccccEEECcCCcCCcC-c-cccCCCCCCEEECCCCcCCc-CCCCc---CcccEEECcCCcCC-
Confidence 99999995 5543 35899999999999874 4 58999999999999999985 44433 58999999999998
Q ss_pred cCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCC
Q 003199 228 PLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGN 307 (840)
Q Consensus 228 ~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 307 (840)
.+| .+..+++|++|++++|.+.+ +|.. +++|+.|++++|++++ +|.. .++|+.|++++|++++... .
T Consensus 229 ~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~----~ 295 (454)
T 1jl5_A 229 ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSE----L 295 (454)
T ss_dssp SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESC----C
T ss_pred ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccC----c
Confidence 556 48899999999999999986 3432 4789999999999984 5653 3789999999999987421 1
Q ss_pred CCCCceeecccceeeeccchhhccc-CcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEE
Q 003199 308 ARNLSELFMQRNQISGFIPSEIYRA-ISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVL 386 (840)
Q Consensus 308 l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 386 (840)
.++|+.|++++|++++. + .+ .+|+.|++++|++++ +|.. +++|+.|++++|+++ .+|. .+++|++|
T Consensus 296 ~~~L~~L~l~~N~l~~i-~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L 362 (454)
T 1jl5_A 296 PPNLYYLNASSNEIRSL-C----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQL 362 (454)
T ss_dssp CTTCCEEECCSSCCSEE-C----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEE
T ss_pred CCcCCEEECcCCcCCcc-c----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEE
Confidence 36899999999999863 2 23 489999999999996 6654 588999999999998 4565 47899999
Q ss_pred ECcCccccc--cCCchhhcc--------------CCCeEEccCCCCcC--cCCccccc
Q 003199 387 DLSNNLLTG--YIPESLCEL--------------LPNSINFSNNRLSG--PIPLSLIK 426 (840)
Q Consensus 387 ~l~~N~l~~--~~p~~~~~~--------------~~~~l~l~~N~l~~--~~p~~~~~ 426 (840)
++++|++++ .+|.++..+ .++.|++++|+++| .+|.++..
T Consensus 363 ~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~sl~~ 420 (454)
T 1jl5_A 363 HVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLHVETNPLREFPDIPESVED 420 (454)
T ss_dssp ECCSSCCSSCCCCCTTCCEEECCC----------------------------------
T ss_pred ECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEECCCCcCCccccchhhHhh
Confidence 999999998 788887765 35788999999987 77765443
No 150
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.9e-39 Score=340.19 Aligned_cols=249 Identities=23% Similarity=0.332 Sum_probs=179.6
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
.+|+..+.||+|+||.||+|.. .+|+.||+|++...... .....+.+.+|+++++.++||||+++++++.+.
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 85 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLA-------KSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK 85 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC------------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcc-------hHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecC
Confidence 4688889999999999999965 57899999998543311 123356788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+ ++++.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||++++++.+||+|||++.
T Consensus 86 ~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 160 (275)
T 2eue_A 86 DEIIMVIEYA-GNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSN 160 (275)
T ss_dssp SCEEEEEECC-CEEHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC-
T ss_pred CeEEEEehhc-CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccce
Confidence 9999999999 788888887654 68999999999999999999999 999999999999999999999999999997
Q ss_pred hhhccCCCCcceecccccccccCccccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKA-TTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
.... ........||+.|+|||.+.+..+ +.++||||+|+++|||++|+.||.... ............
T Consensus 161 ~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~--- 228 (275)
T 2eue_A 161 IMTD----GNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGV--- 228 (275)
T ss_dssp ------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTC---
T ss_pred eccC----cccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCC---
Confidence 6543 222334569999999999987765 789999999999999999999997531 111110000000
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
...+.. ....+.+++.+|++.||++|||+.|++++
T Consensus 229 -----~~~~~~---~~~~~~~li~~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 229 -----YTLPKF---LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -----CCCCTT---SCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred -----CCCCcc---CCHHHHHHHHHHhhcCHhHCCCHHHHhhC
Confidence 011122 23456678889999999999999999876
No 151
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.1e-39 Score=356.48 Aligned_cols=272 Identities=23% Similarity=0.279 Sum_probs=208.0
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|...+.||+|+||+||+|... +|+.||||++..... ....+.+.+|++++++++||||+++++++...
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 79 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---------LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET 79 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---------GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---------cchHHHHHHHHHHHHhcCCCCCCeEEEeeccC
Confidence 46788899999999999999665 699999999853321 12245678899999999999999999999775
Q ss_pred c--cceEEEeecCCCChHHHhhcCC--CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE----cCCCCCe
Q 003199 605 Y--CNLLVYEYMPNGNLWDALHKGL--VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL----DVNYQPK 676 (840)
Q Consensus 605 ~--~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill----~~~~~~k 676 (840)
. ..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+|
T Consensus 80 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~k 156 (396)
T 4eut_A 80 TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYK 156 (396)
T ss_dssp TTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEE
T ss_pred CCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEE
Confidence 5 6799999999999999998653 238999999999999999999999 999999999999999 7777899
Q ss_pred eecccchhhhhccCCCCcceecccccccccCcccccc--------CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcc
Q 003199 677 VADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS--------SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKN 748 (840)
Q Consensus 677 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 748 (840)
|+|||+++.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 157 L~DFG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~ 232 (396)
T 4eut_A 157 LTDFGAARELED----DEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN 232 (396)
T ss_dssp ECCGGGCEECCC----GGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC
T ss_pred EecCCCceEccC----CCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch
Confidence 999999976532 223345679999999998865 56788999999999999999999999753332222
Q ss_pred hhhhhhhhhccc-cchhhh---------ccccc---CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCC
Q 003199 749 IIYWVSIKVDTK-EGIMEV---------LDKKL---SGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPC 813 (840)
Q Consensus 749 ~~~~~~~~~~~~-~~~~~~---------~~~~~---~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 813 (840)
............ .....+ ..... ..........+.+++.+|++.||++||++.|+++.++++-..
T Consensus 233 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 233 KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp HHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 111111111100 000000 00011 112245667788899999999999999999999999876543
No 152
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=346.23 Aligned_cols=266 Identities=23% Similarity=0.331 Sum_probs=198.6
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||+||+|... +|+.||||++..... .....+.+.+|++++++++||||+++++++.+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 73 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESED--------DPVIKKIALREIRMLKQLKHPNLVNLLEVFRR 73 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC---------HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecccc--------chHHHHHHHHHHHHHHhCCCCCccchhheeec
Confidence 357888999999999999999665 699999998844321 23345678899999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 149 (311)
T 4agu_A 74 KRRLHLVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFA 149 (311)
T ss_dssp TTEEEEEEECCSEEHHHHHHHTSS-CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCeEEEEEEeCCCchHHHHHhhhc-CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCc
Confidence 999999999999999998887653 68999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcc---
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDT--- 759 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--- 759 (840)
+.... .........||+.|+|||.+.+ ..++.++||||+|+++|||++|+.||...... ............
T Consensus 150 ~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~ 224 (311)
T 4agu_A 150 RLLTG---PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV--DQLYLIRKTLGDLIP 224 (311)
T ss_dssp EECC---------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCH
T ss_pred hhccC---cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhccccc
Confidence 76542 1222345578999999999876 67899999999999999999999999753211 111000000000
Q ss_pred --------ccchhh--hcccccCC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 760 --------KEGIME--VLDKKLSG----SFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 760 --------~~~~~~--~~~~~~~~----~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
...... ..+..... .+......+.+++.+|++.||++|||++|++++-
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 286 (311)
T 4agu_A 225 RHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHP 286 (311)
T ss_dssp HHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSG
T ss_pred ccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcCh
Confidence 000000 00000000 0112344577899999999999999999999873
No 153
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=356.50 Aligned_cols=259 Identities=24% Similarity=0.250 Sum_probs=201.8
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||+||+|..+ +|+.||||++..... ......+.+.+|..++..++||||+++++++.+
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~-------~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDM-------LKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-------HHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHh-------hhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 467888999999999999999764 799999999853221 111223457889999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+++|+|.+++.+....+++..+..++.||+.||+|||+ ++||||||||+|||++.++++||+|||++
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhh
Confidence 999999999999999999998765579999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccc-------cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhh
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAY-------SSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIK 756 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 756 (840)
+..... .........||+.|+|||++. +..++.++|||||||++|||++|+.||..... ...+.. .
T Consensus 210 ~~~~~~--~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~----~~~~~~-i 282 (412)
T 2vd5_A 210 LKLRAD--GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST----AETYGK-I 282 (412)
T ss_dssp EECCTT--SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHH-H
T ss_pred eeccCC--CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH----HHHHHH-H
Confidence 775431 122233468999999999986 35689999999999999999999999975311 111110 0
Q ss_pred hccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCC---CCHHHHHHHh
Q 003199 757 VDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATR---PTMNEVVQLL 807 (840)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---ps~~evl~~L 807 (840)
..... .. ..+........++.+++.+|+. +|++| |+++|+++|=
T Consensus 283 ~~~~~---~~---~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hp 329 (412)
T 2vd5_A 283 VHYKE---HL---SLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHP 329 (412)
T ss_dssp HTHHH---HC---CCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSG
T ss_pred Hhccc---Cc---CCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCC
Confidence 00000 00 0111011223456678889999 99998 5999999873
No 154
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=351.53 Aligned_cols=255 Identities=22% Similarity=0.319 Sum_probs=195.9
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCC--CCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRH--KNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~ 603 (840)
+.|+..+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++| +||+++++++.+
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~ 80 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--------DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 80 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTC--------CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecccc--------chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee
Confidence 35788899999999999999888899999999854321 13345778999999999986 999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||| +.+|+|.+++.... .+++.++..++.|++.||+|||+ ++|+||||||+|||++ ++.+||+|||++
T Consensus 81 ~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a 154 (343)
T 3dbq_A 81 DQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIA 154 (343)
T ss_dssp SSEEEEEEC-CCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSS
T ss_pred CCEEEEEEe-CCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccc
Confidence 999999999 55889999998764 68999999999999999999999 9999999999999997 578999999999
Q ss_pred hhhhccCCCCcceecccccccccCcccccc-----------CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYS-----------SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYW 752 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 752 (840)
+..... ..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .....
T Consensus 155 ~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~---~~~~~ 230 (343)
T 3dbq_A 155 NQMQPD-TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QISKL 230 (343)
T ss_dssp CCC-------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCS---HHHHH
T ss_pred cccCcc-cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhh---HHHHH
Confidence 876432 11222345679999999999864 6789999999999999999999999975311 11110
Q ss_pred hhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 753 VSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
.. .... ......+... ...+.+++.+||+.||.+|||+.|++++-.
T Consensus 231 ~~-~~~~------~~~~~~~~~~---~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~ 276 (343)
T 3dbq_A 231 HA-IIDP------NHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPY 276 (343)
T ss_dssp HH-HHCT------TSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HH-HhcC------CcccCCcccC---CHHHHHHHHHHcCCChhHCCCHHHHHhCcc
Confidence 00 0000 0001111111 235667888999999999999999998754
No 155
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.5e-39 Score=355.65 Aligned_cols=255 Identities=24% Similarity=0.318 Sum_probs=191.0
Q ss_pred HHHhcCcc-CeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhc-cCCCCcceeeeE
Q 003199 524 ILEAMTEK-NKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGN-IRHKNIVKLYCY 600 (840)
Q Consensus 524 ~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~ 600 (840)
+.+.|... +.||+|+||+||+|.. .+|+.||||++... ..+.+|++++.+ .+||||++++++
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------------~~~~~E~~~~~~~~~hp~iv~l~~~ 123 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------------PKARREVELHWRASQCPHIVRIVDV 123 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------------HHHHHHHHHHHHHTTSTTBCCEEEE
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---------------hhHHHHHHHHHHhcCCCCcceEeEE
Confidence 34556655 6899999999999965 47899999998321 235678887644 489999999998
Q ss_pred Eec----CccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC---C
Q 003199 601 FSS----LYCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV---N 672 (840)
Q Consensus 601 ~~~----~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~ 672 (840)
+.. ....++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+ .+|+||||||+|||++. +
T Consensus 124 ~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~ 200 (400)
T 1nxk_A 124 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 200 (400)
T ss_dssp EEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTT
T ss_pred EeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCC
Confidence 865 567899999999999999998753 468999999999999999999999 99999999999999997 7
Q ss_pred CCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 003199 673 YQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYW 752 (840)
Q Consensus 673 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 752 (840)
+.+||+|||+++.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.............
T Consensus 201 ~~~kl~DFG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~ 276 (400)
T 1nxk_A 201 AILKLTDFGFAKETTS----HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 276 (400)
T ss_dssp CCEEECCCTTCEECC---------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHH
T ss_pred ccEEEEecccccccCC----CCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHH
Confidence 8899999999976532 223345678999999999999999999999999999999999999997643221110000
Q ss_pred hhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 753 VSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
...... .. .. ....+......+.+++.+||+.||++|||+.|++++-.
T Consensus 277 ~~i~~~-~~---~~----~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~ 324 (400)
T 1nxk_A 277 TRIRMG-QY---EF----PNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 324 (400)
T ss_dssp HHHHHT-CC---CC----CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHH
T ss_pred HHHHcC-cc---cC----CCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 000000 00 00 01111223455777888999999999999999999854
No 156
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.5e-39 Score=351.14 Aligned_cols=258 Identities=24% Similarity=0.345 Sum_probs=204.9
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CC-----cEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SG-----EVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLY 598 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-----~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 598 (840)
++|...+.||+|+||.||+|... ++ ..||||++.... .....+.+.+|+.+++.+ +||||++++
T Consensus 46 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~~h~~iv~~~ 116 (333)
T 2i1m_A 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA---------HADEKEALMSELKIMSHLGQHENIVNLL 116 (333)
T ss_dssp TSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC---------CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred HHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc---------ChHHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence 56888899999999999999754 23 479999985432 123356789999999999 899999999
Q ss_pred eEEecCccceEEEeecCCCChHHHhhcC-------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCC
Q 003199 599 CYFSSLYCNLLVYEYMPNGNLWDALHKG-------------LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKST 665 (840)
Q Consensus 599 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~ 665 (840)
+++......++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+
T Consensus 117 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~ 193 (333)
T 2i1m_A 117 GACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAAR 193 (333)
T ss_dssp EEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGG
T ss_pred EEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccc
Confidence 9999999999999999999999998753 2357999999999999999999999 99999999999
Q ss_pred CEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCC
Q 003199 666 NILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFG 744 (840)
Q Consensus 666 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~ 744 (840)
||+++.++.+||+|||+++..... ..........||+.|+|||.+.+..++.++||||||+++|||++ |..||.+...
T Consensus 194 NIl~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 272 (333)
T 2i1m_A 194 NVLLTNGHVAKIGDFGLARDIMND-SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV 272 (333)
T ss_dssp GCEEEGGGEEEBCCCGGGCCGGGC-TTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS
T ss_pred eEEECCCCeEEECccccccccccc-cceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch
Confidence 999999999999999999876442 12222334567889999999998899999999999999999999 9999975321
Q ss_pred CCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 745 DNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
. ........ .......... ....+.+++.+||+.||.+|||+.|++++|+++
T Consensus 273 ~-~~~~~~~~----------~~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 273 N-SKFYKLVK----------DGYQMAQPAF---APKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp S-HHHHHHHH----------HTCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred h-HHHHHHHh----------cCCCCCCCCC---CCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 1 11111000 0001111111 234567788899999999999999999999865
No 157
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=350.08 Aligned_cols=255 Identities=22% Similarity=0.276 Sum_probs=204.9
Q ss_pred HHHHHhcCccCeeeccCCcEEEEEE-eCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 522 REILEAMTEKNKVGQGGSGTVYKID-LNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 522 ~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
.+..++|...+.||+|+||.||+|. ..+|+.||||++.......... ........+.+|+.++++++||||++++++
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~ 97 (335)
T 3dls_A 20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCW--IEDPKLGKVTLEIAILSRVEHANIIKVLDI 97 (335)
T ss_dssp THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSE--EEETTTEEEEHHHHHHTTCCCTTBCCEEEE
T ss_pred cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccc--cchHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 3567899999999999999999996 4578999999986543221100 001112346679999999999999999999
Q ss_pred EecCccceEEEeecCCC-ChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeec
Q 003199 601 FSSLYCNLLVYEYMPNG-NLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVAD 679 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~g-sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 679 (840)
+.+....++||||+.+| +|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~D 173 (335)
T 3dls_A 98 FENQGFFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLID 173 (335)
T ss_dssp EECSSEEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECC
T ss_pred EeeCCEEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEee
Confidence 99999999999999777 9999998764 69999999999999999999999 9999999999999999999999999
Q ss_pred ccchhhhhccCCCCcceecccccccccCccccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 680 FGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKA-TTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 680 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
||+++.... ........||+.|+|||++.+..+ +.++|||||||++|||++|+.||..... .
T Consensus 174 fg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------~------ 236 (335)
T 3dls_A 174 FGSAAYLER----GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-------T------ 236 (335)
T ss_dssp CTTCEECCT----TCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-------G------
T ss_pred cccceECCC----CCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-------H------
Confidence 999976533 223344679999999999988776 8899999999999999999999964210 0
Q ss_pred cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 759 TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
..... ..+.. ....+.+++.+|++.||++|||+.+++++-.
T Consensus 237 ----~~~~~--~~~~~---~~~~l~~li~~~L~~dP~~Rps~~ell~hp~ 277 (335)
T 3dls_A 237 ----VEAAI--HPPYL---VSKELMSLVSGLLQPVPERRTTLEKLVTDPW 277 (335)
T ss_dssp ----TTTCC--CCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHHCTT
T ss_pred ----Hhhcc--CCCcc---cCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 00000 01111 2245677888999999999999999999844
No 158
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.5e-39 Score=359.84 Aligned_cols=260 Identities=23% Similarity=0.291 Sum_probs=194.9
Q ss_pred HHhcCccCeeeccCCcEEEEEE-eCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKID-LNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||+||+|. ..+|+.||||++.... ......+.+.+|+.+++.++||||+++++++..
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--------~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 132 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF--------QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTP 132 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGG--------GSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECS
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccc--------cChHHHHHHHHHHHHHHhCCCCCCCcEEEEEcc
Confidence 4678889999999999999995 4579999999985432 113345678899999999999999999999965
Q ss_pred Cc------cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCee
Q 003199 604 LY------CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKV 677 (840)
Q Consensus 604 ~~------~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 677 (840)
.. ..++||||+++ ++.+.+.. .+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||
T Consensus 133 ~~~~~~~~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl 205 (464)
T 3ttj_A 133 QKTLEEFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKI 205 (464)
T ss_dssp CCSTTTCCEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEE
T ss_pred CCccccCCeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEE
Confidence 43 46999999965 56666654 48999999999999999999999 99999999999999999999999
Q ss_pred ecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh
Q 003199 678 ADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV 757 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 757 (840)
+|||+|+.... ........||+.|+|||++.+..++.++||||+||++|||++|+.||.+.. ....+.....
T Consensus 206 ~DFG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~----~~~~~~~i~~ 277 (464)
T 3ttj_A 206 LDFGLARTAGT----SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD----YIDQWNKVIE 277 (464)
T ss_dssp CCCCCC---------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHH
T ss_pred EEEEeeeecCC----CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHH
Confidence 99999987632 223445689999999999999999999999999999999999999997532 1111111000
Q ss_pred ccc--------------------------cchhhhccccc-CCCc---HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 758 DTK--------------------------EGIMEVLDKKL-SGSF---RDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 758 ~~~--------------------------~~~~~~~~~~~-~~~~---~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
... ........... .... ......+.+++.+|++.||++|||++|+++|=
T Consensus 278 ~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp 357 (464)
T 3ttj_A 278 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHP 357 (464)
T ss_dssp HHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTST
T ss_pred hcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcCh
Confidence 000 00000000000 0000 11245688999999999999999999999873
No 159
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.1e-39 Score=349.27 Aligned_cols=253 Identities=27% Similarity=0.359 Sum_probs=201.8
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.+.|...+.||+|+||.||+|.. .+|+.||||++..... ......+.+.+|++++++++||||+++++++.+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 125 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-------QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR 125 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-------CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc-------cchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE
Confidence 45688899999999999999965 5799999999854321 123345678999999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+. |++.+.+......+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 126 ~~~~~lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 201 (348)
T 1u5q_A 126 EHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSA 201 (348)
T ss_dssp TTEEEEEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTC
T ss_pred CCeEEEEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCc
Confidence 999999999996 78888887655679999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAY---SSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
+.... .....||+.|+|||++. +..++.++|||||||++|||++|+.||..... ....... ....
T Consensus 202 ~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~----~~~~~~~-~~~~ 269 (348)
T 1u5q_A 202 SIMAP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALYHI-AQNE 269 (348)
T ss_dssp BSSSS-------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHHH-HHSC
T ss_pred eecCC-------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHH-HhcC
Confidence 76532 23457999999999884 56789999999999999999999999965311 0000000 0000
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhh
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAE 809 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~ 809 (840)
........+ ...+.+++.+||+.||++|||+.+++++..-
T Consensus 270 ------~~~~~~~~~---~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~ 309 (348)
T 1u5q_A 270 ------SPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309 (348)
T ss_dssp ------CCCCCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred ------CCCCCCCCC---CHHHHHHHHHHcccChhhCcCHHHHhhChhh
Confidence 000011122 2346678889999999999999999987543
No 160
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=5.5e-39 Score=343.47 Aligned_cols=258 Identities=22% Similarity=0.334 Sum_probs=193.0
Q ss_pred HhcCccCeeeccCCcEEEEEEeC----CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN----SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
++|...+.||+|+||.||+|... ++..||||++..... .....+.+.+|+.++++++||||+++++++
T Consensus 34 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 105 (313)
T 3brb_A 34 NLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS--------SQREIEEFLSEAACMKDFSHPNVIRLLGVC 105 (313)
T ss_dssp GGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CC--------CHHHHHHHHHHHHHHHTCCCTTBCCCCEEE
T ss_pred HHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEecccc--------chhHHHHHHHHHHHHhcCCCCCeeeeeEEE
Confidence 56788899999999999999553 345899999854321 123356788999999999999999999999
Q ss_pred ecCcc-----ceEEEeecCCCChHHHhhc-----CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC
Q 003199 602 SSLYC-----NLLVYEYMPNGNLWDALHK-----GLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV 671 (840)
Q Consensus 602 ~~~~~-----~~lV~e~~~~gsL~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 671 (840)
.+... .++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.
T Consensus 106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~ 182 (313)
T 3brb_A 106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRD 182 (313)
T ss_dssp EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECT
T ss_pred eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcC
Confidence 77553 4899999999999999853 23468999999999999999999999 99999999999999999
Q ss_pred CCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchh
Q 003199 672 NYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNII 750 (840)
Q Consensus 672 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~ 750 (840)
++.+||+|||+++...... .........+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ....
T Consensus 183 ~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~ 259 (313)
T 3brb_A 183 DMTVCVADFGLSKKIYSGD-YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMY 259 (313)
T ss_dssp TSCEEECSCSCC-----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHH
T ss_pred CCcEEEeecCcceeccccc-ccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHH
Confidence 9999999999998764321 1123344567889999999999999999999999999999999 8899875321 1111
Q ss_pred hhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 751 YWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
.. ................+.+++.+||+.||++|||+.+++++|+++
T Consensus 260 ~~-------------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 260 DY-------------LLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306 (313)
T ss_dssp HH-------------HHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HH-------------HHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 10 011111111122334677888899999999999999999999875
No 161
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.9e-39 Score=358.86 Aligned_cols=264 Identities=23% Similarity=0.357 Sum_probs=194.4
Q ss_pred HHHHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 522 REILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 522 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
..+.++|...+.||+|+||+||+|.. .+++.||||++........ ..........+.+|+.++++++||||++++++
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~ 208 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIG--SAREADPALNVETEIEILKKLNHPCIIKIKNF 208 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC----------CCHHHHHHHHHHCCCTTBCCCCEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhccc--ccccchhHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 45678899999999999999999955 5789999999865432211 11112223457899999999999999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCC---CCCee
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVN---YQPKV 677 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~kl 677 (840)
+... ..++||||+++|+|.+++.... .+++.++..++.|++.||+|||+ ++|+||||||+|||++.+ +.+||
T Consensus 209 ~~~~-~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 209 FDAE-DYYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp EESS-EEEEEEECCTTCBGGGGTSSSC-CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred EecC-ceEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEE
Confidence 8654 5789999999999999987664 68999999999999999999999 999999999999999754 45999
Q ss_pred ecccchhhhhccCCCCcceecccccccccCcccccc---CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhh
Q 003199 678 ADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS---SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVS 754 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 754 (840)
+|||+|+.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ......
T Consensus 284 ~DFG~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~-~~~~i~ 358 (419)
T 3i6u_A 284 TDFGHSKILGE----TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS-LKDQIT 358 (419)
T ss_dssp CCSSTTTSCC---------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCC-HHHHHH
T ss_pred eecccceecCC----CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHH-HHHHHh
Confidence 99999987532 223345679999999999853 5688999999999999999999999975322111 111000
Q ss_pred hhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 755 IKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.... ......+......+.+++.+|++.||++|||+.|++++=
T Consensus 359 ---~~~~-------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 401 (419)
T 3i6u_A 359 ---SGKY-------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHP 401 (419)
T ss_dssp ---TTCC-------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred ---cCCC-------CCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCc
Confidence 0000 000000112235677888899999999999999999863
No 162
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.3e-39 Score=336.58 Aligned_cols=250 Identities=24% Similarity=0.303 Sum_probs=202.1
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
++.++|+..+.||+|+||.||+|... ++..||+|++..... ...+.+.+|++++++++||||+++++++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~----------~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 75 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV----------EDVDRFKQEIEIMKSLDHPNIIRLYETF 75 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC----------SCHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc----------chHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 45678999999999999999999655 578999999854321 1245688999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE---cCCCCCeee
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL---DVNYQPKVA 678 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~ 678 (840)
.+....++||||+++++|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||++ +.++.+||+
T Consensus 76 ~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~ 151 (277)
T 3f3z_A 76 EDNTDIYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLI 151 (277)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEEC
T ss_pred ecCCeEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEE
Confidence 99999999999999999999987754 68999999999999999999999 999999999999999 788899999
Q ss_pred cccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
|||++..... ........||+.|+|||.+.+ .++.++||||||+++|||++|+.||..... .......
T Consensus 152 Dfg~~~~~~~----~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~--- 219 (277)
T 3f3z_A 152 DFGLAARFKP----GKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTD----SEVMLKI--- 219 (277)
T ss_dssp CCTTCEECCT----TSCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHH---
T ss_pred ecccceeccC----ccchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCH----HHHHHHH---
Confidence 9999976532 223345579999999998765 489999999999999999999999975311 0000000
Q ss_pred cccchhhhcccccCC---CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 759 TKEGIMEVLDKKLSG---SFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 759 ~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
....... ........+.+++.+|++.||++|||+.+++++
T Consensus 220 --------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 220 --------REGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp --------HHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred --------HhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 001223567788889999999999999999875
No 163
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.9e-39 Score=375.72 Aligned_cols=251 Identities=25% Similarity=0.320 Sum_probs=195.8
Q ss_pred CeeeccCCcEEEEEEeC---CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCccce
Q 003199 532 NKVGQGGSGTVYKIDLN---SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLYCNL 608 (840)
Q Consensus 532 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 608 (840)
+.||+|+||+||+|.+. +++.||||+++.... .....+.+.+|++++++++|||||++++++.. +..+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~--------~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~ 445 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAN--------DPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWM 445 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGG--------CGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccC--------CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEE
Confidence 47999999999999553 568899999854321 12335779999999999999999999999965 4578
Q ss_pred EEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhhhhc
Q 003199 609 LVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQA 688 (840)
Q Consensus 609 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 688 (840)
+||||+++|+|.+++.... .+++..+..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+|+.+..
T Consensus 446 lv~E~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~ 521 (635)
T 4fl3_A 446 LVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 521 (635)
T ss_dssp EEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred EEEEccCCCCHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence 9999999999999998754 68999999999999999999999 9999999999999999999999999999988754
Q ss_pred cCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccchhhhc
Q 003199 689 RGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVL 767 (840)
Q Consensus 689 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 767 (840)
............+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+... ...... +.
T Consensus 522 ~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~-------------i~ 586 (635)
T 4fl3_A 522 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAM-------------LE 586 (635)
T ss_dssp -------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHH-------------HH
T ss_pred CccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH-------------HH
Confidence 3222233344567889999999999999999999999999999998 9999975321 111000 00
Q ss_pred ccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 768 DKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 768 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
..............+.+++.+||+.||++||++.++++.|+++
T Consensus 587 ~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 587 KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 0111111122345677888899999999999999999999864
No 164
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=352.40 Aligned_cols=277 Identities=16% Similarity=0.196 Sum_probs=201.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeC----CCcEEEEEEecccccccccC-chhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN----SGEVVAVKKLWSQRTKVSAS-DTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~-~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
++|...+.||+|+||.||+|... ++..||||++.......... ..........+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 46788899999999999999765 57899999986443211000 00011123457789999999999999999999
Q ss_pred Eec----CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCC--C
Q 003199 601 FSS----LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNY--Q 674 (840)
Q Consensus 601 ~~~----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~--~ 674 (840)
+.. ....++||||+ +++|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccCCCCc
Confidence 977 67889999999 999999998765 78999999999999999999999 9999999999999999887 9
Q ss_pred CeeecccchhhhhccCCC----CcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchh
Q 003199 675 PKVADFGIAKVLQARGGK----DSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNII 750 (840)
Q Consensus 675 ~kl~Dfg~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~ 750 (840)
+||+|||+++.+...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||...........
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 999999999876432211 1122456799999999999998999999999999999999999999964322111111
Q ss_pred hhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 751 YWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
...... .............. ......+.+++.+||+.||++||++.++++.|++...
T Consensus 272 -~~~~~~--~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 272 -TAKTNL--LDELPQSVLKWAPS--GSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp -HHHHHH--HHTTTHHHHHHSCT--TSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred -HHHHhh--cccccHHHHhhccc--cccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 110000 00001111000000 0123467778889999999999999999999998765
No 165
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=2.4e-39 Score=349.02 Aligned_cols=256 Identities=23% Similarity=0.300 Sum_probs=200.1
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCY 600 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 600 (840)
.+.+.|+..+.||+|+||.||+|..+ +|+.||||++..... ...+|++++.++ +||||++++++
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~--------------~~~~E~~~l~~~~~hp~iv~~~~~ 84 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR--------------DPTEEIEILLRYGQHPNIITLKDV 84 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC--------------CCHHHHHHHHHHTTSTTBCCEEEE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC--------------ChHHHHHHHHHhcCCCCcCeEEEE
Confidence 45678999999999999999999654 789999999854321 123578888887 79999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCC-C---CCe
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVN-Y---QPK 676 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~---~~k 676 (840)
+.+....++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+||++.++ + .+|
T Consensus 85 ~~~~~~~~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~k 160 (342)
T 2qr7_A 85 YDDGKYVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIR 160 (342)
T ss_dssp EECSSEEEEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEE
T ss_pred EEcCCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEE
Confidence 999999999999999999999998764 68999999999999999999999 999999999999998543 3 499
Q ss_pred eecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhh
Q 003199 677 VADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIK 756 (840)
Q Consensus 677 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 756 (840)
|+|||+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........
T Consensus 161 l~Dfg~a~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~~~~i 235 (342)
T 2qr7_A 161 ICDFGFAKQLRAE---NGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT--PEEILARI 235 (342)
T ss_dssp ECCCTTCEECBCT---TCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC--HHHHHHHH
T ss_pred EEECCCcccCcCC---CCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC--HHHHHHHH
Confidence 9999999865432 222345678999999999988889999999999999999999999997532211 11111110
Q ss_pred hccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 757 VDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
..... . .. .+.+......+.+++.+|++.||++||++.|++++-.
T Consensus 236 ~~~~~---~-~~---~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~ 280 (342)
T 2qr7_A 236 GSGKF---S-LS---GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPW 280 (342)
T ss_dssp HHCCC---C-CC---STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHH
T ss_pred ccCCc---c-cC---ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCe
Confidence 00000 0 00 1111223345677888999999999999999998743
No 166
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.3e-39 Score=359.03 Aligned_cols=270 Identities=25% Similarity=0.367 Sum_probs=192.4
Q ss_pred HHHHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-CCCcceeee
Q 003199 522 REILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-HKNIVKLYC 599 (840)
Q Consensus 522 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~ 599 (840)
+.+.++|+..+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.+++.+. ||||+++++
T Consensus 5 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~--------~~~~~~~~~~E~~~l~~l~~h~niv~l~~ 76 (388)
T 3oz6_A 5 RHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQ--------NSTDAQRTFREIMILTELSGHENIVNLLN 76 (388)
T ss_dssp HHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--C--------CHHHHHHHHHHHHHHHHTTTCTTBCCEEE
T ss_pred CcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccccc--------ChHHHHHHHHHHHHHHhccCCCCCCeeee
Confidence 45678899999999999999999954 5799999999843321 1234566789999999997 999999999
Q ss_pred EEecCc--cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCee
Q 003199 600 YFSSLY--CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKV 677 (840)
Q Consensus 600 ~~~~~~--~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 677 (840)
++...+ ..++||||++ |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||
T Consensus 77 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl 150 (388)
T 3oz6_A 77 VLRADNDRDVYLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKV 150 (388)
T ss_dssp EEECTTSSCEEEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEE
T ss_pred EEecCCCCEEEEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEe
Confidence 997543 6799999997 6999998874 68999999999999999999999 99999999999999999999999
Q ss_pred ecccchhhhhccC------------------CCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCC
Q 003199 678 ADFGIAKVLQARG------------------GKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKP 738 (840)
Q Consensus 678 ~Dfg~a~~~~~~~------------------~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p 738 (840)
+|||+|+.+.... ..........||+.|+|||++.+ ..++.++||||+||++|||++|+.|
T Consensus 151 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~p 230 (388)
T 3oz6_A 151 ADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230 (388)
T ss_dssp CCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCC
Confidence 9999997653210 01122344679999999999876 6789999999999999999999999
Q ss_pred CCCCCCCCcchhhhhhhh-hccccchhhh------------------cccccCCCcH-------------HHHHHHHHHH
Q 003199 739 VEDDFGDNKNIIYWVSIK-VDTKEGIMEV------------------LDKKLSGSFR-------------DEMIQVLRIA 786 (840)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~------------------~~~~~~~~~~-------------~~~~~l~~l~ 786 (840)
|.+.... .......... ....+.+... ........+. .....+.+++
T Consensus 231 f~~~~~~-~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll 309 (388)
T 3oz6_A 231 FPGSSTM-NQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLL 309 (388)
T ss_dssp CCCSSHH-HHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHH
T ss_pred CCCCCHH-HHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHH
Confidence 9753210 0000000000 0000000000 0000111111 1234677899
Q ss_pred HHccCCCCCCCCCHHHHHHH
Q 003199 787 IRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 787 ~~cl~~dP~~Rps~~evl~~ 806 (840)
.+|++.||++|||+.|+++|
T Consensus 310 ~~~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 310 DKLLQFNPNKRISANDALKH 329 (388)
T ss_dssp HHHCCSSGGGSCCHHHHTTS
T ss_pred HHhhccCcccCCCHHHHhCC
Confidence 99999999999999999988
No 167
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.8e-39 Score=366.08 Aligned_cols=255 Identities=25% Similarity=0.315 Sum_probs=204.6
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|...+.||+|+||.||+|... +|+.||||++...... .......+.+|+.+++.++||||+++++++.+.
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~-------~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~ 256 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-------KRKGEAMALNEKQILEKVNSRFVVSLAYAYETK 256 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHH-------HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhh-------hhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeC
Confidence 45778889999999999999664 7999999998543211 122345678999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
...++||||+++|+|.+++.... ..+++..+..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||++
T Consensus 257 ~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla 333 (576)
T 2acx_A 257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLA 333 (576)
T ss_dssp SEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccc
Confidence 99999999999999999997653 358999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
+.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ........
T Consensus 334 ~~~~~----~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~-~i~~~i~~----- 403 (576)
T 2acx_A 334 VHVPE----GQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE-EVERLVKE----- 403 (576)
T ss_dssp EECCT----TCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHH-HHHHHHHH-----
T ss_pred eeccc----CccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHH-HHHHHhhc-----
Confidence 76532 223345689999999999999899999999999999999999999997642211111 11111000
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRP-----TMNEVVQL 806 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~ 806 (840)
........+ ...+.+++.+|++.||++|| ++.|+++|
T Consensus 404 ---~~~~~p~~~---s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 404 ---VPEEYSERF---SPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp ---CCCCCCTTS---CHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ---ccccCCccC---CHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 011122222 34566788899999999999 78999877
No 168
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1e-38 Score=346.05 Aligned_cols=267 Identities=26% Similarity=0.354 Sum_probs=208.6
Q ss_pred HHHHHHhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhc--cCCCCcceee
Q 003199 521 QREILEAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGN--IRHKNIVKLY 598 (840)
Q Consensus 521 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~ 598 (840)
...+.++|...+.||+|+||.||+|... |+.||||++... ....+.+|++++.. ++||||++++
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-------------~~~~~~~e~~~~~~~~l~h~ni~~~~ 102 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-------------EERSWFREAEIYQTVMLRHENILGFI 102 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG-------------GHHHHHHHHHHHHHSCCCCTTBCCEE
T ss_pred cccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch-------------hHHHHHHHHHHHHHhhcCCCcEEEEE
Confidence 4567789999999999999999999875 899999998422 13456778888877 7899999999
Q ss_pred eEEecCc----cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHh--------hcCCCCeEecCCCCCC
Q 003199 599 CYFSSLY----CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLH--------HGLLSPIIHRDIKSTN 666 (840)
Q Consensus 599 ~~~~~~~----~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH--------~~~~~~ivH~Dlk~~N 666 (840)
+++.... ..++||||+++|+|.+++... .+++..+..++.|++.||+||| + .+|+||||||+|
T Consensus 103 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~N 177 (342)
T 1b6c_B 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKN 177 (342)
T ss_dssp EEEECCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGG
T ss_pred eeecccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHH
Confidence 9998775 789999999999999999875 5899999999999999999999 6 899999999999
Q ss_pred EEEcCCCCCeeecccchhhhhccCCCC-cceecccccccccCccccccCC------CCccccchhHHHHHHHHHhC----
Q 003199 667 ILLDVNYQPKVADFGIAKVLQARGGKD-STTTVIAGTYGYLAPEYAYSSK------ATTKCDVYSFGVVLMELITG---- 735 (840)
Q Consensus 667 ill~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~slG~il~el~tg---- 735 (840)
|+++.++.+||+|||+++......... .......||+.|+|||.+.+.. ++.++||||||+++|||++|
T Consensus 178 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~ 257 (342)
T 1b6c_B 178 ILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG 257 (342)
T ss_dssp EEECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred EEECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcC
Confidence 999999999999999997664321110 1234557999999999987652 34789999999999999999
Q ss_pred ------CCCCCCCCCCCcchhhhhhhhhccccchhhhcccccCCCc--HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 736 ------RKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSF--RDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 736 ------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
+.||............+...... ......+...+ .+....+.+++.+||+.||++|||+.|++++|
T Consensus 258 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L 331 (342)
T 1b6c_B 258 GIHEDYQLPYYDLVPSDPSVEEMRKVVCE------QKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTL 331 (342)
T ss_dssp TBCCCCCCTTTTTSCSSCCHHHHHHHHTT------SCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHH
T ss_pred CcccccccCccccCcCcccHHHHHHHHHH------HHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHH
Confidence 67876543322222222211110 01111222211 24566788999999999999999999999999
Q ss_pred hhcCC
Q 003199 808 AEADP 812 (840)
Q Consensus 808 ~~~~~ 812 (840)
+++..
T Consensus 332 ~~i~~ 336 (342)
T 1b6c_B 332 SQLSQ 336 (342)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 169
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.1e-39 Score=341.58 Aligned_cols=266 Identities=22% Similarity=0.260 Sum_probs=199.0
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
...++|...+.||+|+||.||+|... +++.||||++..... ......+.+.+|+.++++++||||+++++++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~ 103 (309)
T 2h34_A 31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLS-------SDPVFRTRMQREARTAGRLQEPHVVPIHDFG 103 (309)
T ss_dssp ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGG-------GSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccc-------cCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE
Confidence 34577899999999999999999664 789999999854321 1234457789999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
......++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 104 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg 179 (309)
T 2h34_A 104 EIDGQLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFG 179 (309)
T ss_dssp EETTEEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCC
T ss_pred eeCCeEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCc
Confidence 99999999999999999999998754 68999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
++...... .........||+.|+|||.+.+..++.++||||||+++|||++|+.||.... .. ..........
T Consensus 180 ~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~---~~---~~~~~~~~~~ 251 (309)
T 2h34_A 180 IASATTDE--KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ---LS---VMGAHINQAI 251 (309)
T ss_dssp C------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH---HH---HHHHHHHSCC
T ss_pred cCcccccc--ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch---HH---HHHHHhccCC
Confidence 99776432 1222345578999999999999899999999999999999999999997531 00 1110110000
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhhcCCCC
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRP-TMNEVVQLLAEADPCR 814 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-s~~evl~~L~~~~~~~ 814 (840)
... ..... .....+.+++.+||+.||++|| +++++++.|+.+-...
T Consensus 252 ~~~----~~~~~---~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 252 PRP----STVRP---GIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp CCG----GGTST---TCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred CCc----cccCC---CCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 000 01111 2233566788899999999999 9999999998765444
No 170
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-39 Score=348.73 Aligned_cols=264 Identities=22% Similarity=0.289 Sum_probs=194.5
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|...+.||+|+||+||+|... +++.||||++...... .....+.+|++++++++||||+++++++.+.
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 72 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE---------GAPCTAIREVSLLKDLKHANIVTLHDIIHTE 72 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------------CCCCCCCHHHHSCCCCTTBCCEEEEEECS
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc---------ccchhHHHHHHHHHhcCCCCCCeeeeEEeeC
Confidence 46888899999999999999665 7899999998543311 1112344699999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||++ |+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 73 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 148 (324)
T 3mtl_A 73 KSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLAR 148 (324)
T ss_dssp SCEEEEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEE
T ss_pred CEEEEEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccc
Confidence 99999999996 69999998776679999999999999999999999 999999999999999999999999999997
Q ss_pred hhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh--cccc
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV--DTKE 761 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~ 761 (840)
.... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+... ........... ....
T Consensus 149 ~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~ 223 (324)
T 3mtl_A 149 AKSI---PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV--EEQLHFIFRILGTPTEE 223 (324)
T ss_dssp CC---------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTT
T ss_pred cccC---CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChH
Confidence 6532 1223344578999999999876 5689999999999999999999999976321 11111100000 0000
Q ss_pred chhhhc---------ccccC-CC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 762 GIMEVL---------DKKLS-GS----FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 762 ~~~~~~---------~~~~~-~~----~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
...... .+... .. .......+.+++.+|++.||++|||++|++++=
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 283 (324)
T 3mtl_A 224 TWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHP 283 (324)
T ss_dssp TSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSG
T ss_pred hchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcCh
Confidence 000000 00000 00 011234667888999999999999999999863
No 171
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=346.29 Aligned_cols=269 Identities=23% Similarity=0.266 Sum_probs=197.4
Q ss_pred HHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC---CCCcceeee
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR---HKNIVKLYC 599 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~ 599 (840)
+.++|+..+.||+|+||+||+|.. .+|+.||||++......... ......+.+|++++++++ ||||+++++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~h~niv~~~~ 81 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGG-----GGLPISTVREVALLRRLEAFEHPNVVRLMD 81 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTS-----SCCCHHHHHHHHHHHHHHHHCCTTBCCEEE
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccc-----cccchhHHHHHHHHHHHhhcCCCCeEEeee
Confidence 356899999999999999999965 57899999998644321110 111234556777776664 999999999
Q ss_pred EEecCc-----cceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCC
Q 003199 600 YFSSLY-----CNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNY 673 (840)
Q Consensus 600 ~~~~~~-----~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~ 673 (840)
++.... ..++||||+. |+|.+++.... ..+++.++..++.|++.||+|||+ ++|+||||||+||+++.++
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~ 157 (308)
T 3g33_A 82 VCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGG 157 (308)
T ss_dssp EEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTS
T ss_pred eeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCC
Confidence 997655 4789999996 69999998764 348999999999999999999999 9999999999999999999
Q ss_pred CCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 003199 674 QPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWV 753 (840)
Q Consensus 674 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 753 (840)
.+||+|||+++.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||....... ......
T Consensus 158 ~~kl~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~ 232 (308)
T 3g33_A 158 TVKLADFGLARIYSY----QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIF 232 (308)
T ss_dssp CEEECSCSCTTTSTT----CCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHH
T ss_pred CEEEeeCccccccCC----CcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHH
Confidence 999999999986632 223345678999999999999999999999999999999999999997532110 000000
Q ss_pred hhh-hccccchh-------hhcccccCCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 754 SIK-VDTKEGIM-------EVLDKKLSGSF----RDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 754 ~~~-~~~~~~~~-------~~~~~~~~~~~----~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
... ........ ........... .+....+.+++.+|++.||++|||+.|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp HHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 000 00000000 00000000000 1223567788889999999999999999976
No 172
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.2e-39 Score=345.50 Aligned_cols=264 Identities=23% Similarity=0.314 Sum_probs=187.3
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||.||+|... +|+.||||++...... ...+.+.+|++++++++||||+++++++.+.
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---------~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 75 (317)
T 2pmi_A 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE---------GTPSTAIREISLMKELKHENIVRLYDVIHTE 75 (317)
T ss_dssp --------------CEEEEEECSSSCCEEEEEEEECCSTT---------CSCHHHHHHHHHHTTCCBTTBCCEEEEECCT
T ss_pred cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc---------ccHHHHHHHHHHHHhcCCCCcceEEEEEEEC
Confidence 56788899999999999999654 6899999998543311 1124577899999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeec
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGL-----VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVAD 679 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 679 (840)
...++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 76 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~D 151 (317)
T 2pmi_A 76 NKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGD 151 (317)
T ss_dssp TEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECC
T ss_pred CeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECc
Confidence 99999999997 69999886532 358999999999999999999999 9999999999999999999999999
Q ss_pred ccchhhhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 680 FGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 680 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
||+++..... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.... ............
T Consensus 152 fg~~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~ 227 (317)
T 2pmi_A 152 FGLARAFGIP---VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGT 227 (317)
T ss_dssp CSSCEETTSC---CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCS
T ss_pred CccceecCCC---cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCC
Confidence 9999876321 222344578999999999876 46899999999999999999999999753211 000000000000
Q ss_pred c-ccchhh---------hcccccCCCcH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 759 T-KEGIME---------VLDKKLSGSFR---------DEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 759 ~-~~~~~~---------~~~~~~~~~~~---------~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
. ...... ........... .....+.+++.+|++.||++|||+.|++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 228 PNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp CCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 0 000000 00000000111 123467788889999999999999999986
No 173
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.5e-39 Score=352.26 Aligned_cols=246 Identities=25% Similarity=0.296 Sum_probs=190.1
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHH-HhccCCCCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVET-LGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~ 603 (840)
++|+..+.||+|+||+||+|..+ +++.||||++...... .......+..|..+ ++.++||||+++++++.+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~-------~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~ 110 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAIL-------KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT 110 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC--------------------CCBCCCCCTTBCCEEEEEEC
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-------hhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe
Confidence 56888999999999999999665 6899999998654321 11223455667776 577899999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 111 ~~~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a 186 (373)
T 2r5t_A 111 ADKLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLC 186 (373)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBC
T ss_pred CCEEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCccc
Confidence 999999999999999999998754 68999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
+.... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...........
T Consensus 187 ~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~---- 254 (373)
T 2r5t_A 187 KENIE---HNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----TAEMYDNILNK---- 254 (373)
T ss_dssp GGGBC---CCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB-----HHHHHHHHHHS----
T ss_pred ccccc---CCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhc----
Confidence 86432 2223456689999999999999999999999999999999999999997531 11111100100
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHH
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMN 801 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ 801 (840)
...+...+ ...+.+++.+|++.||++||++.
T Consensus 255 ----~~~~~~~~---~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 255 ----PLQLKPNI---TNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp ----CCCCCSSS---CHHHHHHHHHHTCSSGGGSTTTT
T ss_pred ----ccCCCCCC---CHHHHHHHHHHcccCHHhCCCCC
Confidence 01112222 23566778899999999999974
No 174
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.5e-39 Score=340.85 Aligned_cols=254 Identities=20% Similarity=0.272 Sum_probs=199.3
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CC-------cEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCccee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SG-------EVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKL 597 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 597 (840)
++|...+.||+|+||.||+|... ++ ..||+|++.... ....+.+.+|++++++++||||+++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~----------~~~~~~~~~E~~~l~~l~h~~iv~~ 77 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH----------RNYSESFFEAASMMSKLSHKHLVLN 77 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG----------GGGHHHHHHHHHHHHTSCCTTBCCE
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc----------HHHHHHHHHHHHHHHhCCCCCEeEE
Confidence 46788899999999999999554 34 479999984322 2335678999999999999999999
Q ss_pred eeEEecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC---
Q 003199 598 YCYFSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ--- 674 (840)
Q Consensus 598 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~--- 674 (840)
++++.+....++||||+++|+|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.
T Consensus 78 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~ 154 (289)
T 4fvq_A 78 YGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKT 154 (289)
T ss_dssp EEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGG
T ss_pred EEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCcccc
Confidence 999999999999999999999999998876569999999999999999999999 99999999999999998887
Q ss_pred -----CeeecccchhhhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcc
Q 003199 675 -----PKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKN 748 (840)
Q Consensus 675 -----~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 748 (840)
+||+|||++..... .....||+.|+|||.+.+ ..++.++||||||+++|||++|..|+..... ..
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~--~~ 225 (289)
T 4fvq_A 155 GNPPFIKLSDPGISITVLP-------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD--SQ 225 (289)
T ss_dssp TBCCEEEECCCCSCTTTSC-------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--HH
T ss_pred cccceeeeccCcccccccC-------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc--hH
Confidence 99999999865422 233568899999999887 6789999999999999999996544432111 00
Q ss_pred hhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCC
Q 003199 749 IIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRF 815 (840)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 815 (840)
........ ........ ...+.+++.+||+.||++|||+.|++++|+++.....
T Consensus 226 --~~~~~~~~---------~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 226 --RKLQFYED---------RHQLPAPK---AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp --HHHHHHHT---------TCCCCCCS---SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred --HHHHHhhc---------cCCCCCCC---CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 00000000 00111111 2345678889999999999999999999998866444
No 175
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.2e-38 Score=334.41 Aligned_cols=256 Identities=25% Similarity=0.394 Sum_probs=205.7
Q ss_pred HHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
..++|+..+.||+|+||.||+|... +|+.||||++..... ....+.+.+|+.+++.++||||+++++++.
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 75 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---------VDCPENIKKEICINKMLNHENVVKFYGHRR 75 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---------TTHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---------hhhhHHHHHHHHHHHhcCCCCceeeeeEEE
Confidence 4678999999999999999999665 789999999854321 123467889999999999999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccc
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGI 682 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 682 (840)
+....++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||.
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 151 (276)
T 2yex_A 76 EGNIQYLFLEYCSGGELFDRIEPDI-GMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGL 151 (276)
T ss_dssp ETTEEEEEEECCTTEEGGGGSBTTT-BCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred cCCEEEEEEEecCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCC
Confidence 9999999999999999999997653 68999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhccCCCCcceecccccccccCccccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 683 AKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKA-TTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 683 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
+...... ..........||+.|+|||.+.+..+ +.++||||||+++|||++|+.||............|... .
T Consensus 152 ~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~-- 225 (276)
T 2yex_A 152 ATVFRYN-NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK---K-- 225 (276)
T ss_dssp CEECEET-TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT---C--
T ss_pred ccccCCC-cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc---c--
Confidence 9765432 11122345678999999999987665 789999999999999999999997643322222222110 0
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
............+.+++.+|++.||++|||+.|++++
T Consensus 226 --------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 226 --------TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (276)
T ss_dssp --------TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred --------cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcC
Confidence 0001111223456778889999999999999999875
No 176
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=6.1e-39 Score=340.57 Aligned_cols=259 Identities=25% Similarity=0.327 Sum_probs=199.7
Q ss_pred hcCccCeeeccCCcEEEEEEeCC----CcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE-
Q 003199 527 AMTEKNKVGQGGSGTVYKIDLNS----GEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF- 601 (840)
Q Consensus 527 ~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~- 601 (840)
.|...+.||+|+||.||+|...+ +..||||.+.... .....+.+.+|+.++++++||||+++++++
T Consensus 26 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 96 (298)
T 3f66_A 26 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT---------DIGEVSQFLTEGIIMKDFSHPNVLSLLGICL 96 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC---------SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC
T ss_pred ehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC---------CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEE
Confidence 46677899999999999997542 2368999885322 123456788999999999999999999986
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
......++||||+++|+|.+++......+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg 173 (298)
T 3f66_A 97 RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFG 173 (298)
T ss_dssp CSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCG
T ss_pred cCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccc
Confidence 45567799999999999999998766678999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCC-CCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhcc
Q 003199 682 IAKVLQARGG-KDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDT 759 (840)
Q Consensus 682 ~a~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 759 (840)
+++....... .........||+.|+|||.+.+..++.++||||+|+++|||++ |.+||...... ...... ...
T Consensus 174 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~~~~---~~~ 248 (298)
T 3f66_A 174 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL---LQG 248 (298)
T ss_dssp GGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT--THHHHH---HTT
T ss_pred ccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHH---hcC
Confidence 9976543211 1123344567889999999999999999999999999999999 55666543211 111100 000
Q ss_pred ccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 760 KEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
. ....... ....+.+++.+|++.||++|||+.|+++.|+++..
T Consensus 249 ~-------~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 249 R-------RLLQPEY---CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp C-------CCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred C-------CCCCCcc---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0 0011111 23457778889999999999999999999987644
No 177
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.6e-39 Score=341.52 Aligned_cols=258 Identities=24% Similarity=0.314 Sum_probs=202.0
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe--
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS-- 602 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-- 602 (840)
++|+..+.||+|+||.||+|... +|+.||+|++...... ....+.+.+|++++++++||||+++++++.
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 77 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMT--------EAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR 77 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCC--------HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCC--------HHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC
Confidence 57888899999999999999665 7899999998543211 233567899999999999999999999874
Q ss_pred cCccceEEEeecCCCChHHHhhcC---CCCCChHHHHHHHHHHHHHHHHHhhcCCCC-----eEecCCCCCCEEEcCCCC
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKG---LVHLDWPTRHKIAFGVAQGLAYLHHGLLSP-----IIHRDIKSTNILLDVNYQ 674 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-----ivH~Dlk~~Nill~~~~~ 674 (840)
.....++||||+++++|.+++... ...+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.
T Consensus 78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~ 154 (279)
T 2w5a_A 78 TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQN 154 (279)
T ss_dssp GGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSC
T ss_pred CCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCC
Confidence 456789999999999999998754 2348999999999999999999999 77 999999999999999999
Q ss_pred CeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhh
Q 003199 675 PKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVS 754 (840)
Q Consensus 675 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 754 (840)
+||+|||.++..... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||.... .... ..
T Consensus 155 ~kl~dfg~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~---~~ 226 (279)
T 2w5a_A 155 VKLGDFGLARILNHD---TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKEL---AG 226 (279)
T ss_dssp EEECCCCHHHHC------CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHH---HH
T ss_pred EEEecCchheeeccc---cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC--HHHH---HH
Confidence 999999999876431 122234578999999999998899999999999999999999999997531 0100 00
Q ss_pred hhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 755 IKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
.. .......+... ....+.+++.+||+.||++||++.|+++++....+
T Consensus 227 ~i-------~~~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 227 KI-------REGKFRRIPYR---YSDELNEIITRMLNLKDYHRPSVEEILENPLILEH 274 (279)
T ss_dssp HH-------HHTCCCCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGG
T ss_pred HH-------hhcccccCCcc---cCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhh
Confidence 00 00000111222 23456778889999999999999999998765443
No 178
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=1.1e-38 Score=338.22 Aligned_cols=266 Identities=20% Similarity=0.198 Sum_probs=201.6
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
.+.++|+..+.||+|+||.||+|.. .+++.||||++..... ...+.+|+++++.++|++++..++++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------~~~~~~e~~~l~~l~~~~~i~~~~~~ 73 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------------HPQLHIESKIYKMMQGGVGIPTIRWC 73 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---------------CCCHHHHHHHHHHHTTSTTCCCEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc------------chHHHHHHHHHHHhcCCCCCCeeeee
Confidence 3457899999999999999999965 6789999998643321 12467899999999988877776665
Q ss_pred -ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE---cCCCCCee
Q 003199 602 -SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL---DVNYQPKV 677 (840)
Q Consensus 602 -~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl 677 (840)
......++||||+ +++|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||++ +.++.+||
T Consensus 74 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL 149 (296)
T 4hgt_A 74 GAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYI 149 (296)
T ss_dssp EEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEE
T ss_pred cCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEE
Confidence 6677779999999 999999998665679999999999999999999999 999999999999999 78899999
Q ss_pred ecccchhhhhccCCCC----cceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 003199 678 ADFGIAKVLQARGGKD----STTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWV 753 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 753 (840)
+|||+++......... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........... ..
T Consensus 150 ~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~ 228 (296)
T 4hgt_A 150 IDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK-YE 228 (296)
T ss_dssp CCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH-HH
T ss_pred ecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhh-hh
Confidence 9999998764422111 123456799999999999999999999999999999999999999976432211111 00
Q ss_pred hhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 754 SIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
........ ......... ....+.+++.+|++.||++|||+.++++.|+++..
T Consensus 229 ~~~~~~~~----~~~~~~~~~---~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 229 RISEKKMS----TPIEVLCKG---YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HHHHHHHH----SCHHHHTTT---SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred hhhccccc----chhhhhhcc---CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 00000000 000000111 13467788889999999999999999999987543
No 179
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4.7e-39 Score=353.59 Aligned_cols=254 Identities=22% Similarity=0.320 Sum_probs=196.7
Q ss_pred hcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC--CCCcceeeeEEecC
Q 003199 527 AMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR--HKNIVKLYCYFSSL 604 (840)
Q Consensus 527 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~ 604 (840)
.|...+.||+|+||.||+|...+++.||||++..... .....+.+.+|+.++++++ ||||+++++++...
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~ 128 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--------DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD 128 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTC--------CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccc--------cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecC
Confidence 4888899999999999999888899999999854321 1334577899999999996 59999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||| +.+++|.+++.... .+++.++..++.||+.||+|||+ .+|+||||||+|||++ ++.+||+|||+++
T Consensus 129 ~~~~lv~E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~ 202 (390)
T 2zmd_A 129 QYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIAN 202 (390)
T ss_dssp SEEEEEEE-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSC
T ss_pred CEEEEEEe-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccc
Confidence 99999999 56899999998765 78999999999999999999999 9999999999999995 5799999999998
Q ss_pred hhhccCCCCcceecccccccccCcccccc-----------CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYS-----------SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWV 753 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 753 (840)
.+... ..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .. ...
T Consensus 203 ~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~---~~-~~~ 277 (390)
T 2zmd_A 203 QMQPD-TTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN---QI-SKL 277 (390)
T ss_dssp CC----------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCC---HH-HHH
T ss_pred cccCC-CccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhH---HH-HHH
Confidence 76432 11122345679999999999865 4689999999999999999999999975311 10 000
Q ss_pred hhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 754 SIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
....... .....+... ...+.+++.+||+.||++|||+.|++++-.
T Consensus 278 ~~~~~~~------~~~~~~~~~---~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 323 (390)
T 2zmd_A 278 HAIIDPN------HEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPY 323 (390)
T ss_dssp HHHHCTT------SCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHhCcc------ccCCCCccc---hHHHHHHHHHHcccChhhCCCHHHHhhCcC
Confidence 0000000 001111122 245677888999999999999999998743
No 180
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.2e-39 Score=370.82 Aligned_cols=256 Identities=29% Similarity=0.401 Sum_probs=205.0
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|+..+.||+|+||.||+|.+.++..||||++..... ..+.|.+|++++++++|+||+++++++.+ .
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-----------~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~ 334 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-----------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 334 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-----------CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-----------CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c
Confidence 46778889999999999999998888999999854321 13568899999999999999999999876 6
Q ss_pred cceEEEeecCCCChHHHhhcC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 606 CNLLVYEYMPNGNLWDALHKG-LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
..++||||+++|+|.+++... ...+++.++..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+++
T Consensus 335 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~ 411 (535)
T 2h8h_A 335 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLAR 411 (535)
T ss_dssp SCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTT
T ss_pred cceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccce
Confidence 789999999999999999753 2358999999999999999999999 999999999999999999999999999998
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
..... .........++..|+|||.+....++.++|||||||++|||++ |+.||.+... ......
T Consensus 412 ~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~~~~~----------- 476 (535)
T 2h8h_A 412 LIEDN--EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQ----------- 476 (535)
T ss_dssp TCCCH--HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HHHHHH-----------
T ss_pred ecCCC--ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH-----------
Confidence 65321 1111223456789999999998899999999999999999999 9999975311 111100
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCC
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPC 813 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 813 (840)
+...............+.+++.+||+.||++|||+.++++.|+++...
T Consensus 477 --i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 477 --VERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp --HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred --HHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 000000011112334577788899999999999999999999987543
No 181
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.2e-39 Score=348.76 Aligned_cols=267 Identities=24% Similarity=0.245 Sum_probs=202.2
Q ss_pred HHHHHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeee
Q 003199 521 QREILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYC 599 (840)
Q Consensus 521 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 599 (840)
..++.++|...+.||+|+||.||+|.. .+++.||||++....... ......+.+.+|++++++++||||+++++
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 95 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQ-----INPKDVERIKTEVRLMKKLHHPNIARLYE 95 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC--------CHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcc-----cCHHHHHHHHHHHHHHHhCCCCCcceeeh
Confidence 357788999999999999999999965 578999999985432110 01233567899999999999999999999
Q ss_pred EEecCccceEEEeecCCCChHHHhhcC---------------------------------------CCCCChHHHHHHHH
Q 003199 600 YFSSLYCNLLVYEYMPNGNLWDALHKG---------------------------------------LVHLDWPTRHKIAF 640 (840)
Q Consensus 600 ~~~~~~~~~lV~e~~~~gsL~~~l~~~---------------------------------------~~~~~~~~~~~i~~ 640 (840)
++.+....++||||+++|+|.+++... ...+++..++.++.
T Consensus 96 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 175 (345)
T 3hko_A 96 VYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175 (345)
T ss_dssp EEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHH
T ss_pred hhccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHH
Confidence 999999999999999999999988521 11235677889999
Q ss_pred HHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCC--CCeeecccchhhhhccCCC-CcceecccccccccCcccccc--CC
Q 003199 641 GVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNY--QPKVADFGIAKVLQARGGK-DSTTTVIAGTYGYLAPEYAYS--SK 715 (840)
Q Consensus 641 ~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~--~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~--~~ 715 (840)
|++.||+|||+ .+|+||||||+||+++.++ .+||+|||+++.+...... ........||+.|+|||.+.+ ..
T Consensus 176 qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 252 (345)
T 3hko_A 176 QIFSALHYLHN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNES 252 (345)
T ss_dssp HHHHHHHHHHH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSC
T ss_pred HHHHHHHHHHH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCC
Confidence 99999999999 9999999999999998776 8999999999876442221 223345679999999999865 67
Q ss_pred CCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCC
Q 003199 716 ATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPA 795 (840)
Q Consensus 716 ~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~ 795 (840)
++.++||||||+++|||++|+.||...... ........... ....+.+......+.+++.+|++.||.
T Consensus 253 ~~~~~DiwslG~il~el~~g~~pf~~~~~~-----~~~~~~~~~~~-------~~~~~~~~~~~~~~~~li~~~l~~~p~ 320 (345)
T 3hko_A 253 YGPKCDAWSAGVLLHLLLMGAVPFPGVNDA-----DTISQVLNKKL-------CFENPNYNVLSPLARDLLSNLLNRNVD 320 (345)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHHHHCCC-------CTTSGGGGGSCHHHHHHHHHHSCSCTT
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCCCCCChH-----HHHHHHHhccc-------ccCCcccccCCHHHHHHHHHHcCCChh
Confidence 899999999999999999999999753110 00000000000 000111122345677888899999999
Q ss_pred CCCCHHHHHHHh
Q 003199 796 TRPTMNEVVQLL 807 (840)
Q Consensus 796 ~Rps~~evl~~L 807 (840)
+||++.|++++-
T Consensus 321 ~Rps~~~~l~hp 332 (345)
T 3hko_A 321 ERFDAMRALQHP 332 (345)
T ss_dssp TSCCHHHHHHSH
T ss_pred HCCCHHHHhcCh
Confidence 999999999863
No 182
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=3.9e-39 Score=345.22 Aligned_cols=260 Identities=25% Similarity=0.335 Sum_probs=205.3
Q ss_pred HHhcCccCeeeccCCcEEEEEEe------CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCccee
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL------NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKL 597 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l 597 (840)
.++|...+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|+.++.++ +||||+++
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---------THSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC---------CHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC---------CcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 35788899999999999999963 356899999985432 123346788999999999 69999999
Q ss_pred eeEEecCc-cceEEEeecCCCChHHHhhcCCCC---------------CChHHHHHHHHHHHHHHHHHhhcCCCCeEecC
Q 003199 598 YCYFSSLY-CNLLVYEYMPNGNLWDALHKGLVH---------------LDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRD 661 (840)
Q Consensus 598 ~~~~~~~~-~~~lV~e~~~~gsL~~~l~~~~~~---------------~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~D 661 (840)
++++.... ..++||||+++|+|.+++...... +++..+..++.|++.||+|||+ ++|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCccccc
Confidence 99987654 489999999999999999875422 7899999999999999999999 9999999
Q ss_pred CCCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCC
Q 003199 662 IKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVE 740 (840)
Q Consensus 662 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~ 740 (840)
|||+||+++.++.+||+|||+++..... ..........||+.|+|||++.+..++.++||||||+++|||++ |+.||.
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~ 252 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKD-PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 252 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTC-TTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSST
T ss_pred CccceEEECCCCCEEECCCccccccccC-ccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCc
Confidence 9999999999999999999999876432 12223345568899999999999999999999999999999998 999997
Q ss_pred CCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 741 DDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
...... ..... ... ......... ....+.+++.+||+.||++|||+.|++++|+++.
T Consensus 253 ~~~~~~-~~~~~--~~~--------~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 253 GVKIDE-EFCRR--LKE--------GTRMRAPDY---TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp TCCCSH-HHHHH--HHH--------TCCCCCCTT---CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccchhH-HHHHH--hcc--------CccCCCCCC---CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 532111 11000 000 000111111 2345777888999999999999999999998653
No 183
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=7.3e-39 Score=342.01 Aligned_cols=267 Identities=21% Similarity=0.303 Sum_probs=198.6
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
..+|...+.||+|+||.||+|.. .+|+.||||++..... ........+.+|+.++++++||||+++++++..
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 103 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-------MDAKARADCIKEIDLLKQLNHPNVIKYYASFIE 103 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS-------CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc-------cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence 35788899999999999999965 5799999999854221 113345678899999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhc---CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecc
Q 003199 604 LYCNLLVYEYMPNGNLWDALHK---GLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADF 680 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 680 (840)
....++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+||
T Consensus 104 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Df 180 (310)
T 2wqm_A 104 DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDL 180 (310)
T ss_dssp TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC
T ss_pred CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEec
Confidence 9999999999999999998864 23468999999999999999999999 99999999999999999999999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
|+++..... ........|++.|+|||.+.+..++.++||||||+++|||++|+.||...... ............
T Consensus 181 g~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~ 254 (310)
T 2wqm_A 181 GLGRFFSSK---TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIEQCD 254 (310)
T ss_dssp ---------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC---HHHHHHHHHTTC
T ss_pred cceeeecCC---CccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh---HHHHHHHhhccc
Confidence 999876431 12233457899999999999989999999999999999999999999753211 111111000000
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCCC
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRFE 816 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 816 (840)
....... .....+.+++.+||+.||++|||+.++++.|+++.+...+
T Consensus 255 ------~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 255 ------YPPLPSD---HYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp ------SCCCCTT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred ------CCCCccc---ccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 0000011 1234567788899999999999999999999987655443
No 184
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.5e-39 Score=363.11 Aligned_cols=254 Identities=23% Similarity=0.285 Sum_probs=194.9
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||.||+|.. .+|+.||||++...... .......+.+|+.+++.++||||+++++++.+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~ 219 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-------AKDEVAHTLTENRVLQNSRHPFLTALKYSFQT 219 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC--------------------CCCCCSCTTSCCEEEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-------hhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee
Confidence 35788899999999999999965 57999999998543211 12234567789999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
.+..++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. ++|+||||||+|||++.++.+||+|||+|
T Consensus 220 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a 296 (446)
T 4ejn_A 220 HDRLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLC 296 (446)
T ss_dssp TTEEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCC
T ss_pred CCEEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCc
Confidence 999999999999999999997764 689999999999999999999962 68999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
+.... .........||+.|+|||++.+..++.++|||||||++|||++|+.||..... . .........
T Consensus 297 ~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~---~~~~~i~~~---- 364 (446)
T 4ejn_A 297 KEGIK---DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--E---KLFELILME---- 364 (446)
T ss_dssp CTTCC--------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHHHHHC----
T ss_pred eeccC---CCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--H---HHHHHHHhC----
Confidence 76432 22234457899999999999999999999999999999999999999975311 1 111100000
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHh
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRP-----TMNEVVQLL 807 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~L 807 (840)
....+... ...+.+++.+|++.||++|| +++|+++|-
T Consensus 365 ----~~~~p~~~---~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 365 ----EIRFPRTL---GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp ----CCCCCTTS---CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred ----CCCCCccC---CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 01112222 34567788899999999999 999999863
No 185
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=337.78 Aligned_cols=259 Identities=23% Similarity=0.294 Sum_probs=201.0
Q ss_pred cCccCeeeccCCcEEEEEEeC-CC---cEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 528 MTEKNKVGQGGSGTVYKIDLN-SG---EVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 528 ~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
|...+.||+|+||+||+|... ++ ..||+|++.... .....+.+.+|+.++++++||||+++++++.+
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 93 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRIT---------EMQQVEAFLREGLLMRGLNHPNVLALIGIMLP 93 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCC---------SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccc---------cHHHHHHHHHHHHHHHhCCCCCeeeEEEEEec
Confidence 445678999999999999653 23 379999984322 12345678899999999999999999999977
Q ss_pred Cccc-eEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccc
Q 003199 604 LYCN-LLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGI 682 (840)
Q Consensus 604 ~~~~-~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 682 (840)
.+.. ++||||+.+|+|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 94 ~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~ 170 (298)
T 3pls_A 94 PEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGL 170 (298)
T ss_dssp SSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTS
T ss_pred CCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCC
Confidence 6655 89999999999999998866678999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhccCC-CCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 683 AKVLQARGG-KDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 683 a~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
++....... .........+|+.|+|||.+.+..++.++||||||+++|||++|..|+..... ......... ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~---~~-- 244 (298)
T 3pls_A 171 ARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFLA---QG-- 244 (298)
T ss_dssp SCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHHH---TT--
T ss_pred cccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHhh---cC--
Confidence 976543211 11233445688999999999999999999999999999999996655433211 111111100 00
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
....... .....+.+++.+|++.||.+|||+.++++.|+++..
T Consensus 245 -----~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~ 287 (298)
T 3pls_A 245 -----RRLPQPE---YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVS 287 (298)
T ss_dssp -----CCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -----CCCCCCc---cchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 0001111 123457778889999999999999999999987643
No 186
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=3.5e-38 Score=343.85 Aligned_cols=260 Identities=26% Similarity=0.417 Sum_probs=207.0
Q ss_pred HHHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeee
Q 003199 522 REILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYC 599 (840)
Q Consensus 522 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 599 (840)
..+.++|...+.||+|+||.||+|... +|+.||||++....... .........+.+.+|+.+++++ .||||+++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~--~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERL--SPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCC--CHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEcccccc--CHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 456678999999999999999999765 79999999985543221 1122334467789999999999 7999999999
Q ss_pred EEecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeec
Q 003199 600 YFSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVAD 679 (840)
Q Consensus 600 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 679 (840)
++......++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .||+||||||+||+++.++.+||+|
T Consensus 168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~D 243 (365)
T 2y7j_A 168 SYESSSFMFLVFDLMRKGELFDYLTEKV-ALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSD 243 (365)
T ss_dssp EEEBSSEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred EEeeCCEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEe
Confidence 9999999999999999999999998654 68999999999999999999999 9999999999999999999999999
Q ss_pred ccchhhhhccCCCCcceecccccccccCcccccc------CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 003199 680 FGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS------SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWV 753 (840)
Q Consensus 680 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 753 (840)
||++..+.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....
T Consensus 244 fG~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~----~~~~~- 314 (365)
T 2y7j_A 244 FGFSCHLEP----GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR----QILML- 314 (365)
T ss_dssp CTTCEECCT----TCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS----HHHHH-
T ss_pred cCcccccCC----CcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC----HHHHH-
Confidence 999976643 222345679999999998853 358899999999999999999999996531 11000
Q ss_pred hhhhccccchhhhcccccCCC---cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 754 SIKVDTKEGIMEVLDKKLSGS---FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.. +........ +......+.+++.+|++.||++|||+.|++++
T Consensus 315 ~~----------i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 315 RM----------IMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HH----------HHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HH----------HHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 00 000000000 01123457788889999999999999999985
No 187
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.1e-38 Score=335.98 Aligned_cols=258 Identities=25% Similarity=0.323 Sum_probs=201.9
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||.||+|... +|+.||||++......... .....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 79 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSR----RGVSREEIEREVNILREIRHPNIITLHDIFEN 79 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCS----SSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccc----cchHHHHHHHHHHHHHhCCCCCeeehhheecC
Confidence 467899999999999999999665 7999999998654422111 11224678899999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCC----CCeeec
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNY----QPKVAD 679 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~----~~kl~D 679 (840)
....++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++ .+||+|
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~d 155 (283)
T 3bhy_A 80 KTDVVLILELVSGGELFDFLAEKE-SLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLID 155 (283)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred CCeEEEEEeecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEe
Confidence 999999999999999999997654 68999999999999999999999 9999999999999998877 799999
Q ss_pred ccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcc
Q 003199 680 FGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDT 759 (840)
Q Consensus 680 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 759 (840)
||++..... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ...+.... ..
T Consensus 156 fg~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~-~~ 226 (283)
T 3bhy_A 156 FGIAHKIEA----GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK----QETLTNIS-AV 226 (283)
T ss_dssp CTTCEECC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHH-TT
T ss_pred cccceeccC----CCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch----HHHHHHhH-hc
Confidence 999976532 2223445689999999999988999999999999999999999999975311 00010000 00
Q ss_pred ccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 760 KEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.. ...... .......+.+++.+|++.||++|||+.|++++
T Consensus 227 ~~----~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 227 NY----DFDEEY---FSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CC----CCCHHH---HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred cc----CCcchh---cccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 00 000000 01123457788889999999999999999985
No 188
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.4e-38 Score=355.35 Aligned_cols=354 Identities=19% Similarity=0.169 Sum_probs=288.4
Q ss_pred CCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEE
Q 003199 19 LRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLE 98 (840)
Q Consensus 19 L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 98 (840)
-+.++.++++++ .+|..+. ++|+.|+|++| .+..+++..|..+++|++|+|++|.+.+..|..|.++++|++|+
T Consensus 13 ~~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n---~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~ 86 (477)
T 2id5_A 13 DRAVLCHRKRFV-AVPEGIP--TETRLLDLGKN---RIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLG 86 (477)
T ss_dssp TTEEECCSCCCS-SCCSCCC--TTCSEEECCSS---CCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEEEeCCCCcC-cCCCCCC--CCCcEEECCCC---ccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEE
Confidence 468999999999 7787664 68999999999 77888888999999999999999999999999999999999999
Q ss_pred ccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccc
Q 003199 99 LTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLS 178 (840)
Q Consensus 99 L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 178 (840)
|++|+++...+..|..+++|++|+|++|+ +.+..+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|+++
T Consensus 87 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~-i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 165 (477)
T 2id5_A 87 LRSNRLKLIPLGVFTGLSNLTKLDISENK-IVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLT 165 (477)
T ss_dssp CCSSCCCSCCTTSSTTCTTCCEEECTTSC-CCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCS
T ss_pred CCCCcCCccCcccccCCCCCCEEECCCCc-cccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCc
Confidence 99999997666789999999999999998 56667888999999999999999999888999999999999999999999
Q ss_pred cccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccc
Q 003199 179 GEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLA 258 (840)
Q Consensus 179 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 258 (840)
+..+..|.++++|+.|+|++|.+.+..+..|..+++|+.|++++|.+.+.++.. ..
T Consensus 166 ~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~------------------------~~ 221 (477)
T 2id5_A 166 SIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPN------------------------CL 221 (477)
T ss_dssp SCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTT------------------------TT
T ss_pred ccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcc------------------------cc
Confidence 888888999999999999999999888889999999999999998876544432 22
Q ss_pred cccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEE
Q 003199 259 RCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKI 338 (840)
Q Consensus 259 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 338 (840)
...+|++|++++|++++..+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..+..+++|+.|
T Consensus 222 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 301 (477)
T 2id5_A 222 YGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVL 301 (477)
T ss_dssp TTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEE
T ss_pred cCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEE
Confidence 23467777777777774333566777788888888888877777777778888888888888887777788888888888
Q ss_pred EcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhcc
Q 003199 339 DLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCEL 404 (840)
Q Consensus 339 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 404 (840)
+|++|+|++..+..|..+++|+.|+|++|++....+. ..-...+..+++.++...+.-|..+...
T Consensus 302 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~-~~~~~~~~~~~~~~~~~~C~~p~~~~g~ 366 (477)
T 2id5_A 302 NVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL-LWVFRRRWRLNFNRQQPTCATPEFVQGK 366 (477)
T ss_dssp ECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG-HHHHTTTTSSCCTTCCCBEEESGGGTTC
T ss_pred ECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch-HhHHhhhhccccCccCceeCCchHHcCC
Confidence 8888888866666777888888888888888643221 1112233445556666665556554433
No 189
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-39 Score=346.83 Aligned_cols=274 Identities=24% Similarity=0.294 Sum_probs=199.5
Q ss_pred HHHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 522 REILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 522 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
....++|...+.||+|+||.||+|... +|+.||||++....... ......+.+.+|+++++.++||||++++++
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 80 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSE-----AKDGINRTALREIKLLQELSHPNIIGLLDA 80 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC-----------------CTHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcch-----hhhhhhHHHHHHHHHHhhCCCCCCCeEEEE
Confidence 445678999999999999999999765 68999999985432111 111123467889999999999999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecc
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADF 680 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 680 (840)
+.+....++||||+++ +|.+++......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Df 156 (346)
T 1ua2_A 81 FGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADF 156 (346)
T ss_dssp ECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred EeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEec
Confidence 9999999999999975 8999888776678999999999999999999999 99999999999999999999999999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhh-hhc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSS-KATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSI-KVD 758 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-~~~ 758 (840)
|+++..... ........||+.|+|||.+.+. .++.++|||||||++|||++|.+||.+.... ......... ...
T Consensus 157 g~a~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~ 232 (346)
T 1ua2_A 157 GLAKSFGSP---NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTP 232 (346)
T ss_dssp GGGSTTTSC---CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCC
T ss_pred ccceeccCC---cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCC
Confidence 999876432 2233456789999999998654 5899999999999999999999998753210 000000000 000
Q ss_pred cccchhhh------cc-cccCCCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 759 TKEGIMEV------LD-KKLSGSF-----RDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 759 ~~~~~~~~------~~-~~~~~~~-----~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
........ .. ....... ......+.+++.+|++.||++|||+.|++++-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~ 294 (346)
T 1ua2_A 233 TEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 294 (346)
T ss_dssp CTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred ChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChh
Confidence 00000000 00 0000000 122356788888999999999999999999854
No 190
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.8e-38 Score=336.57 Aligned_cols=266 Identities=20% Similarity=0.191 Sum_probs=204.6
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE-ec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF-SS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~ 603 (840)
++|+..+.||+|+||.||+|.. .+|+.||||++..... .+.+.+|+.+++.++|++++..+.++ ..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------------~~~~~~e~~~l~~l~~~~~i~~~~~~~~~ 76 (296)
T 3uzp_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------------HPQLHIESKIYKMMQGGVGIPTIRWCGAE 76 (296)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS------------CCHHHHHHHHHHHHTTSTTCCCEEEEEEE
T ss_pred cEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc------------hhHHHHHHHHHHHhhcCCCCCccccccCC
Confidence 5688889999999999999965 6799999999854321 12477899999999988877766655 55
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE---cCCCCCeeecc
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL---DVNYQPKVADF 680 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~Df 680 (840)
....++||||+ +++|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||++ +.++.+||+||
T Consensus 77 ~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 77 GDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred CCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 67779999999 999999998665679999999999999999999999 999999999999999 48889999999
Q ss_pred cchhhhhccCCCC----cceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhh
Q 003199 681 GIAKVLQARGGKD----STTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIK 756 (840)
Q Consensus 681 g~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 756 (840)
|+++......... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||........... +....
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~~~ 231 (296)
T 3uzp_A 153 GLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK-YERIS 231 (296)
T ss_dssp TTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH-HHHHH
T ss_pred CCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhh-hhhhc
Confidence 9998764422111 123456799999999999999999999999999999999999999976432211110 00000
Q ss_pred hccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCC
Q 003199 757 VDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRF 815 (840)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 815 (840)
..... ......... ....+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 232 ~~~~~----~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 232 EKKMS----TPIEVLCKG---YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp HHHHH----SCHHHHTTT---SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ccccC----CchHHHHhh---CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 00000 000001111 22457778889999999999999999999987654443
No 191
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=9e-39 Score=343.91 Aligned_cols=261 Identities=25% Similarity=0.308 Sum_probs=202.4
Q ss_pred HhcCccCeeeccCCcEEEEEEe------CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL------NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYC 599 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 599 (840)
++|...+.||+|+||.||+|.. .+++.||||++.... .......+.+|+.++++++||||+++++
T Consensus 30 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 100 (327)
T 2yfx_A 30 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC---------SEQDELDFLMEALIISKFNHQNIVRCIG 100 (327)
T ss_dssp GGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC---------CHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred hheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc---------chhhHHHHHHHHHHHhhCCCCCCCeEEE
Confidence 5788899999999999999963 357799999984322 1233457889999999999999999999
Q ss_pred EEecCccceEEEeecCCCChHHHhhcCC------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC--
Q 003199 600 YFSSLYCNLLVYEYMPNGNLWDALHKGL------VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV-- 671 (840)
Q Consensus 600 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-- 671 (840)
++......++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 101 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~ 177 (327)
T 2yfx_A 101 VSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPG 177 (327)
T ss_dssp EECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSS
T ss_pred EEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCC
Confidence 9999999999999999999999998653 358999999999999999999999 99999999999999984
Q ss_pred -CCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcch
Q 003199 672 -NYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNI 749 (840)
Q Consensus 672 -~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~ 749 (840)
+..+||+|||+++...... .........||+.|+|||.+.+..++.++||||||+++|||++ |+.||.... ....
T Consensus 178 ~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~ 254 (327)
T 2yfx_A 178 PGRVAKIGDFGMARDIYRAS-YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--NQEV 254 (327)
T ss_dssp TTCCEEECCCHHHHHHHC-------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHH
T ss_pred CcceEEECcccccccccccc-ccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC--HHHH
Confidence 4469999999998764321 1223345568899999999988899999999999999999998 999987531 1111
Q ss_pred hhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCC
Q 003199 750 IYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCR 814 (840)
Q Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 814 (840)
.... ... ....... .....+.+++.+||+.||++||++.+++++|+.+....
T Consensus 255 ~~~~---~~~-------~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~ 306 (327)
T 2yfx_A 255 LEFV---TSG-------GRMDPPK---NCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP 306 (327)
T ss_dssp HHHH---HTT-------CCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred HHHH---hcC-------CCCCCCC---CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence 1110 000 0011111 22345677888999999999999999999998765443
No 192
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=6.6e-39 Score=343.40 Aligned_cols=265 Identities=23% Similarity=0.334 Sum_probs=194.6
Q ss_pred HhcCcc-CeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEe
Q 003199 526 EAMTEK-NKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFS 602 (840)
Q Consensus 526 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 602 (840)
+.|... +.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++.++ +||||+++++++.
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----------~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~ 81 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG----------HIRSRVFREVEMLYQCQGHRNVLELIEFFE 81 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS----------CCHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc----------hhHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 356653 6799999999999965 4799999999854321 1245688899999885 7999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC---Ceeec
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ---PKVAD 679 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl~D 679 (840)
+....++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++. +||+|
T Consensus 82 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~D 157 (316)
T 2ac3_A 82 EEDRFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICD 157 (316)
T ss_dssp ETTEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECC
T ss_pred eCCEEEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEE
Confidence 9999999999999999999998764 68999999999999999999999 99999999999999998776 89999
Q ss_pred ccchhhhhccCCC----CcceecccccccccCcccccc-----CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchh
Q 003199 680 FGIAKVLQARGGK----DSTTTVIAGTYGYLAPEYAYS-----SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNII 750 (840)
Q Consensus 680 fg~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~ 750 (840)
||+++.....+.. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.........
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-- 235 (316)
T 2ac3_A 158 FDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG-- 235 (316)
T ss_dssp TTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC--
T ss_pred ccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc--
Confidence 9999765432111 112234569999999999865 56889999999999999999999999764322110
Q ss_pred hhhhhhhc---cccchhhhcccccCC---CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 751 YWVSIKVD---TKEGIMEVLDKKLSG---SFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 751 ~~~~~~~~---~~~~~~~~~~~~~~~---~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
|...... .......+......- ........+.+++.+|++.||++|||+.|++++-
T Consensus 236 -~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp 297 (316)
T 2ac3_A 236 -WDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297 (316)
T ss_dssp -C----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHST
T ss_pred -ccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcCh
Confidence 1000000 000000011111100 0011235677888999999999999999999863
No 193
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.3e-37 Score=351.59 Aligned_cols=347 Identities=25% Similarity=0.345 Sum_probs=301.9
Q ss_pred cCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCC
Q 003199 38 FNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKN 117 (840)
Q Consensus 38 ~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~ 117 (840)
..+++|+.|++++| .+..++. +..+++|++|+|++|.+++..+ ++++++|++|+|++|.+++..+ +..+++
T Consensus 43 ~~l~~l~~L~l~~~---~i~~l~~--~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~ 113 (466)
T 1o6v_A 43 TDLDQVTTLQADRL---GIKSIDG--VEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTN 113 (466)
T ss_dssp HHHHTCCEEECCSS---CCCCCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTT
T ss_pred hHhccccEEecCCC---CCccCcc--hhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCC
Confidence 45788999999999 5566653 8889999999999999986644 9999999999999999995544 999999
Q ss_pred CCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEcc
Q 003199 118 LRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLY 197 (840)
Q Consensus 118 L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 197 (840)
|++|+|++|+ +. .++. +..+++|++|++++|.+++. + .+..+++|+.|+++ |.+.+.. .+.++++|++|+++
T Consensus 114 L~~L~L~~n~-l~-~~~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~ 185 (466)
T 1o6v_A 114 LTGLTLFNNQ-IT-DIDP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDIS 185 (466)
T ss_dssp CCEEECCSSC-CC-CCGG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECC
T ss_pred CCEEECCCCC-CC-CChH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccCch--hhccCCCCCEEECc
Confidence 9999999997 33 3443 89999999999999999953 3 58999999999997 5565443 38999999999999
Q ss_pred CCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccC
Q 003199 198 DNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSI 277 (840)
Q Consensus 198 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 277 (840)
+|+++.. ..+..+++|+.|++++|.+++..+ +..+++|+.|++++|.+.+. ..+..+++|+.|++++|.+++..
T Consensus 186 ~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~ 259 (466)
T 1o6v_A 186 SNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLA 259 (466)
T ss_dssp SSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG
T ss_pred CCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccch
Confidence 9999854 458899999999999999997765 77889999999999999864 46889999999999999998654
Q ss_pred CccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCcc
Q 003199 278 PEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLK 357 (840)
Q Consensus 278 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 357 (840)
+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +..+++|+.|+|++|++++..| +..++
T Consensus 260 ~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~ 331 (466)
T 1o6v_A 260 P--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLT 331 (466)
T ss_dssp G--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCT
T ss_pred h--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCc
Confidence 4 8899999999999999997655 8899999999999999997655 7899999999999999997766 78999
Q ss_pred ccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhcc-CCCeEEccCCCCcCc
Q 003199 358 KLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCEL-LPNSINFSNNRLSGP 419 (840)
Q Consensus 358 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~-~~~~l~l~~N~l~~~ 419 (840)
+|+.|++++|++++. ..+..+++|+.|++++|++++..| +..+ .++.|++++|++++.
T Consensus 332 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 332 KLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp TCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred cCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 999999999999865 478999999999999999998887 5555 568999999999973
No 194
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=9.3e-39 Score=342.40 Aligned_cols=263 Identities=22% Similarity=0.301 Sum_probs=201.6
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe--
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS-- 602 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-- 602 (840)
++|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++.
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 98 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE----------QQDREEAQREADMHRLFNHPNILRLVAYCLRE 98 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS----------HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC----------HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec
Confidence 4688899999999999999965 579999999884322 234567889999999999999999999986
Q ss_pred --cCccceEEEeecCCCChHHHhhc---CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCee
Q 003199 603 --SLYCNLLVYEYMPNGNLWDALHK---GLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKV 677 (840)
Q Consensus 603 --~~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 677 (840)
.....++||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 99 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl 175 (317)
T 2buj_A 99 RGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVL 175 (317)
T ss_dssp ETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEE
T ss_pred cCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEE
Confidence 34467899999999999998876 23468999999999999999999999 99999999999999999999999
Q ss_pred ecccchhhhhccCCCC------cceecccccccccCccccccCC---CCccccchhHHHHHHHHHhCCCCCCCCCCCCcc
Q 003199 678 ADFGIAKVLQARGGKD------STTTVIAGTYGYLAPEYAYSSK---ATTKCDVYSFGVVLMELITGRKPVEDDFGDNKN 748 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 748 (840)
+|||++.......... .......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||.........
T Consensus 176 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~ 255 (317)
T 2buj_A 176 MDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS 255 (317)
T ss_dssp CCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC
T ss_pred EecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch
Confidence 9999886542210000 0112345799999999987554 688999999999999999999998532111111
Q ss_pred hhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCC
Q 003199 749 IIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCR 814 (840)
Q Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~ 814 (840)
..... ......+........+.+++.+||+.||.+|||+.+++++|+.+.+..
T Consensus 256 ~~~~~-------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 256 VALAV-------------QNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp HHHHH-------------HCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred hhHHh-------------hccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 11000 000000111122346778888999999999999999999999886543
No 195
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=7.9e-39 Score=344.34 Aligned_cols=259 Identities=26% Similarity=0.350 Sum_probs=201.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEE--EEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVV--AVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYF 601 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~v--avK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 601 (840)
++|...+.||+|+||.||+|... +|..+ |||++..... ....+.+.+|+++++++ +||||+++++++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~---------~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 95 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS---------KDDHRDFAGELEVLCKLGHHPNIINLLGAC 95 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC---------------CHHHHHHHHHTTCCCCTTBCCEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc---------hHHHHHHHHHHHHHHhccCCCchhhhceee
Confidence 56788899999999999999654 56654 9998853221 12345688999999999 899999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCC---------------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCC
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGL---------------VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTN 666 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~N 666 (840)
.+....++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+|
T Consensus 96 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~N 172 (327)
T 1fvr_A 96 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARN 172 (327)
T ss_dssp EETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGG
T ss_pred eeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccce
Confidence 99999999999999999999997653 368999999999999999999999 999999999999
Q ss_pred EEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCC
Q 003199 667 ILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGD 745 (840)
Q Consensus 667 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~ 745 (840)
|+++.++.+||+|||+++.... ........+++.|+|||.+.+..++.++||||||+++|||++ |+.||.....
T Consensus 173 Il~~~~~~~kL~Dfg~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~- 247 (327)
T 1fvr_A 173 ILVGENYVAKIADFGLSRGQEV----YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC- 247 (327)
T ss_dssp EEECGGGCEEECCTTCEESSCE----ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-
T ss_pred EEEcCCCeEEEcccCcCccccc----cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-
Confidence 9999999999999999874322 122234567889999999988889999999999999999998 9999975311
Q ss_pred CcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCC
Q 003199 746 NKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRF 815 (840)
Q Consensus 746 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 815 (840)
...... . .......... .....+.+++.+|++.||++|||+.|++++|.++...+.
T Consensus 248 ----~~~~~~-~------~~~~~~~~~~---~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 248 ----AELYEK-L------PQGYRLEKPL---NCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp ----HHHHHH-G------GGTCCCCCCT---TBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred ----HHHHHH-h------hcCCCCCCCC---CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 011100 0 0000011111 223457778889999999999999999999987655544
No 196
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=9.5e-39 Score=343.38 Aligned_cols=260 Identities=21% Similarity=0.272 Sum_probs=202.5
Q ss_pred HHHHHHhcCcc-CeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-CCCccee
Q 003199 521 QREILEAMTEK-NKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-HKNIVKL 597 (840)
Q Consensus 521 ~~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l 597 (840)
...+.+.|... +.||+|+||.||+|... +|+.||||++...... ......+.+|+.++..+. ||||+++
T Consensus 23 ~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~e~~~l~~l~~~~~iv~~ 94 (327)
T 3lm5_A 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG--------QDCRAEILHEIAVLELAKSCPRVINL 94 (327)
T ss_dssp HHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETT--------EECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred HHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcc--------hHHHHHHHHHHHHHHhccCCCCEEEE
Confidence 34566777776 88999999999999655 7999999998544321 122457889999999995 6999999
Q ss_pred eeEEecCccceEEEeecCCCChHHHhhcC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC---CC
Q 003199 598 YCYFSSLYCNLLVYEYMPNGNLWDALHKG-LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV---NY 673 (840)
Q Consensus 598 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~~ 673 (840)
++++.+....++||||+++|+|.+++... ...+++.++..++.|++.||+|||+ .+|+||||||+||+++. ++
T Consensus 95 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~ 171 (327)
T 3lm5_A 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLG 171 (327)
T ss_dssp EEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBC
T ss_pred EEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCC
Confidence 99999999999999999999999998654 3468999999999999999999999 99999999999999987 78
Q ss_pred CCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 003199 674 QPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWV 753 (840)
Q Consensus 674 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 753 (840)
.+||+|||+++.... ........||+.|+|||++.+..++.++||||||+++|||++|+.||..... .....
T Consensus 172 ~~kL~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~ 243 (327)
T 3lm5_A 172 DIKIVDFGMSRKIGH----ACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN----QETYL 243 (327)
T ss_dssp CEEECCGGGCEEC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHH
T ss_pred cEEEeeCccccccCC----ccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHH
Confidence 999999999986632 2223446799999999999999999999999999999999999999975311 00000
Q ss_pred hhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 754 SIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
... ..........+......+.+++.+|++.||++|||++|++++-
T Consensus 244 ~i~--------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~ 289 (327)
T 3lm5_A 244 NIS--------QVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHS 289 (327)
T ss_dssp HHH--------HTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCG
T ss_pred HHH--------hcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCH
Confidence 000 0000011111222345567788899999999999999999874
No 197
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=344.79 Aligned_cols=248 Identities=15% Similarity=0.143 Sum_probs=197.2
Q ss_pred HhcCccCeeeccCCcEEEEE------EeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC---CCCcce
Q 003199 526 EAMTEKNKVGQGGSGTVYKI------DLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR---HKNIVK 596 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~------~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~ 596 (840)
+.|...+.||+|+||+||+| ...+++.||||++.... ...+..|+++++.++ |+|+++
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-------------~~~~~~e~~~~~~l~~~~~~~iv~ 131 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-------------PWEFYIGTQLMERLKPSMQHMFMK 131 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC-------------HHHHHHHHHHHHHSCGGGGGGBCC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-------------hhHHHHHHHHHHHhhhhhhhhhhh
Confidence 46778889999999999999 45578999999984322 235667777777776 999999
Q ss_pred eeeEEecCccceEEEeecCCCChHHHhhc----CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC-
Q 003199 597 LYCYFSSLYCNLLVYEYMPNGNLWDALHK----GLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV- 671 (840)
Q Consensus 597 l~~~~~~~~~~~lV~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~- 671 (840)
+++++...+..++||||+++|+|.+++.. ....++|..+..++.|++.||+|||+ ++||||||||+|||++.
T Consensus 132 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~ 208 (365)
T 3e7e_A 132 FYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNG 208 (365)
T ss_dssp EEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGG
T ss_pred hheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEeccc
Confidence 99999999999999999999999999974 23469999999999999999999999 99999999999999998
Q ss_pred ----------CCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 003199 672 ----------NYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVED 741 (840)
Q Consensus 672 ----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 741 (840)
++.+||+|||+|+.+... ..........||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 209 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~ 287 (365)
T 3e7e_A 209 FLEQDDEDDLSAGLALIDLGQSIDMKLF-PKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK 287 (365)
T ss_dssp GTCC------CTTEEECCCTTCEEGGGS-CTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred ccCccccccccCCEEEeeCchhhhhhcc-CCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence 899999999999765432 223344567799999999999999999999999999999999999999854
Q ss_pred CCCCCcchhhhhhhhhccccchhhhcccccCC-CcHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHhhhcC
Q 003199 742 DFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSG-SFRDEMIQVLRIAIRCTSKSPATR-PTMNEVVQLLAEAD 811 (840)
Q Consensus 742 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~R-ps~~evl~~L~~~~ 811 (840)
...... . ....... ...+ .+.+++..|+..+|.+| |+++++.+.|+++-
T Consensus 288 ~~~~~~--------------~----~~~~~~~~~~~~---~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 288 NEGGEC--------------K----PEGLFRRLPHLD---MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp EETTEE--------------E----ECSCCTTCSSHH---HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred CCCCce--------------e----echhccccCcHH---HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 211100 0 0111111 1223 34456668999999999 57888888887653
No 198
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.3e-38 Score=361.55 Aligned_cols=257 Identities=26% Similarity=0.336 Sum_probs=203.5
Q ss_pred HHHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 522 REILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 522 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
..+.++|...+.||+|+||+||+|... +|+.||||++...... ......+.+|++++++++||||++++++
T Consensus 18 g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~E~~~l~~l~hpniv~~~~~ 89 (486)
T 3mwu_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--------NKDTSTILREVELLKKLDHPNIMKLFEI 89 (486)
T ss_dssp CHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB--------CSCHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc--------chHHHHHHHHHHHHHhCCCCCcCeEEEE
Confidence 356788999999999999999999654 7999999998543211 1124678899999999999999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEc---CCCCCee
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLD---VNYQPKV 677 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~---~~~~~kl 677 (840)
+.+....++||||+++|+|.+.+.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++ .++.+||
T Consensus 90 ~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl 165 (486)
T 3mwu_A 90 LEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKI 165 (486)
T ss_dssp EECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEE
T ss_pred EEcCCEEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEE
Confidence 999999999999999999999887654 68999999999999999999999 9999999999999995 4567999
Q ss_pred ecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh
Q 003199 678 ADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV 757 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 757 (840)
+|||+++.... ........||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+... ... .....
T Consensus 166 ~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~---~~~i~ 235 (486)
T 3mwu_A 166 IDFGLSTCFQQ----NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--YDI---LKRVE 235 (486)
T ss_dssp CSCSCTTTBCC----C----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHH---HHHHH
T ss_pred EECCcCeECCC----CCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHH---HHHHH
Confidence 99999986632 223345679999999998875 589999999999999999999999975311 111 00000
Q ss_pred ccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 758 DTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.... . ...+.+......+.+++.+|++.||++|||+.|++++-
T Consensus 236 ~~~~------~-~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp 278 (486)
T 3mwu_A 236 TGKY------A-FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278 (486)
T ss_dssp HTCC------C-SCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCH
T ss_pred hCCC------C-CCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCH
Confidence 0000 0 00111222345677888899999999999999999973
No 199
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=348.50 Aligned_cols=267 Identities=27% Similarity=0.352 Sum_probs=205.0
Q ss_pred HhcCccCeeeccCCcEEEEEEe-----CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-----NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
+.|+..+.||+|+||.||+|.+ .+|+.||||++.... ....+.+.+|++++++++||||++++++
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 110 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST----------EEHLRDFEREIEILKSLQHDNIVKYKGV 110 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC----------SHHHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC----------HHHHHHHHHHHHHHHhCCCCCeeeEEEE
Confidence 4577889999999999999973 468999999985422 2335678999999999999999999999
Q ss_pred EecCc--cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeee
Q 003199 601 FSSLY--CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVA 678 (840)
Q Consensus 601 ~~~~~--~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 678 (840)
+.... ..++||||+++++|.+++......+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 111 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~ 187 (326)
T 2w1i_A 111 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIG 187 (326)
T ss_dssp ECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEEC
T ss_pred EEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEe
Confidence 86644 6799999999999999998876679999999999999999999999 999999999999999999999999
Q ss_pred cccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
|||+++................++..|+|||.+.+..++.++||||||+++|||++|..|+..... .+......
T Consensus 188 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~------~~~~~~~~ 261 (326)
T 2w1i_A 188 DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGN 261 (326)
T ss_dssp CCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHH------HHHHHHCT
T ss_pred cCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHH------HHHHhhcc
Confidence 999998764322111222344577889999999888899999999999999999999998763210 00000000
Q ss_pred cc------cchhhhccc-ccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcC
Q 003199 759 TK------EGIMEVLDK-KLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEAD 811 (840)
Q Consensus 759 ~~------~~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~ 811 (840)
.. ......+.. ...+........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 262 DKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp TCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 00 000011111 111111223456777888999999999999999999998753
No 200
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=5.4e-38 Score=351.70 Aligned_cols=351 Identities=22% Similarity=0.224 Sum_probs=263.2
Q ss_pred CCCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCC
Q 003199 12 DFSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNV 91 (840)
Q Consensus 12 ~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 91 (840)
.++.+++|++|+|++|.|++ +| .+..+++|++|+|++| .+..++ +..+++|++|++++|.+++. + ++++
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n---~l~~~~---~~~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSN---NITTLD---LSQNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSS---CCSCCC---CTTCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred ChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCC---cCCeEc---cccCCCCCEEECcCCCCcee-e--cCCC
Confidence 46778999999999999995 46 6899999999999999 555554 88899999999999999864 3 8899
Q ss_pred CCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEE
Q 003199 92 TSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQ 171 (840)
Q Consensus 92 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (840)
++|++|+|++|++++ +| +..+++|++|++++|+ +.+ ++ ++.+++|++|++++|+..+.+ .+..+++|+.|+
T Consensus 106 ~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~-l~~-l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNT-LTE-ID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp TTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSC-CSC-CC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCc-cce-ec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 999999999999995 44 8899999999999998 333 43 788999999999999554444 478899999999
Q ss_pred eeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccc
Q 003199 172 LYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSG 251 (840)
Q Consensus 172 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~ 251 (840)
+++|+++++. +..+++|+.|++++|++++. .+..+++|+.|+|++|++++ +| +..+++|++|++++|.+.+
T Consensus 177 ls~n~l~~l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 177 CSFNKITELD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CCSSCCCCCC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred CCCCccceec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 9999998753 78889999999999999865 48889999999999999987 44 7788889999999999887
Q ss_pred cCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccch----
Q 003199 252 VLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPS---- 327 (840)
Q Consensus 252 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~---- 327 (840)
..+. .+++|+.|++++|+ |+.|++++|.+.+..| ++.+++|+.|+|++|...+.+|.
T Consensus 248 ~~~~---~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~ 308 (457)
T 3bz5_A 248 LDVS---TLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAG 308 (457)
T ss_dssp CCCT---TCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCC
T ss_pred cCHH---HCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCc
Confidence 6544 44555555554443 2334444444433333 23444555555555543333332
Q ss_pred ----hhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhc
Q 003199 328 ----EIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCE 403 (840)
Q Consensus 328 ----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~ 403 (840)
.+..+++|+.|++++|++++. + ++.+++|+.|++++|+|++ ++.|..|++++|.++|. + .+
T Consensus 309 L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-~-~~-- 373 (457)
T 3bz5_A 309 ITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-G-QT-- 373 (457)
T ss_dssp CSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-E-EE--
T ss_pred ceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-c-ee--
Confidence 123346788888888888874 3 7888888888888888875 24566677888888876 2 11
Q ss_pred cCCCeEEccCCCCcCcCCcccc
Q 003199 404 LLPNSINFSNNRLSGPIPLSLI 425 (840)
Q Consensus 404 ~~~~~l~l~~N~l~~~~p~~~~ 425 (840)
..+..+++++|+++|.+|..+.
T Consensus 374 ~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 374 ITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp EECCCBCCBTTBEEEECCTTCB
T ss_pred eecCccccccCcEEEEcChhHh
Confidence 1346678899999999987543
No 201
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.4e-38 Score=338.83 Aligned_cols=255 Identities=24% Similarity=0.361 Sum_probs=202.5
Q ss_pred HHHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 522 REILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 522 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
..+.++|...+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||++++++
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~~~~~ 74 (304)
T 2jam_A 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA----------FRDSSLENEIAVLKKIKHENIVTLEDI 74 (304)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------------HHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc----------cchHHHHHHHHHHHhCCCCCeeehhhh
Confidence 345678999999999999999999664 799999999854321 123567899999999999999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE---cCCCCCee
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL---DVNYQPKV 677 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl 677 (840)
+.+....++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++ +.++.+||
T Consensus 75 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl 150 (304)
T 2jam_A 75 YESTTHYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMI 150 (304)
T ss_dssp EECSSEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEB
T ss_pred cccCCEEEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEE
Confidence 999999999999999999999987654 68999999999999999999999 999999999999999 77889999
Q ss_pred ecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh
Q 003199 678 ADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV 757 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 757 (840)
+|||+++.... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ... .... .
T Consensus 151 ~Dfg~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~--~~~i-~ 220 (304)
T 2jam_A 151 TDFGLSKMEQN-----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE--SKL--FEKI-K 220 (304)
T ss_dssp CSCSTTCCCCC-----BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH--HHH--HHHH-H
T ss_pred ccCCcceecCC-----CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHH--HHHH-H
Confidence 99999865321 223345689999999999998999999999999999999999999975311 100 0000 0
Q ss_pred ccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 758 DTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.... . .. ..........+.+++.+|++.||++|||+.|++++-
T Consensus 221 ~~~~---~-~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~ 263 (304)
T 2jam_A 221 EGYY---E-FE---SPFWDDISESAKDFICHLLEKDPNERYTCEKALSHP 263 (304)
T ss_dssp HCCC---C-CC---TTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred cCCC---C-CC---ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCc
Confidence 0000 0 00 111122335677788899999999999999999864
No 202
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.5e-38 Score=358.51 Aligned_cols=197 Identities=24% Similarity=0.340 Sum_probs=154.1
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec-
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS- 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 603 (840)
++|...+.||+|+||+||+|.. .+|+.||||++.... ......+.+.+|+++++.++||||+++++++..
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~--------~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 124 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVF--------EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPK 124 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTT--------SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhh--------cCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecC
Confidence 5788999999999999999954 479999999984322 123345778999999999999999999999843
Q ss_pred ----CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeec
Q 003199 604 ----LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVAD 679 (840)
Q Consensus 604 ----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 679 (840)
....++||||+ +|+|.+++.... .+++..+..++.||+.||+|||+ .+||||||||+|||++.++.+||+|
T Consensus 125 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~D 199 (458)
T 3rp9_A 125 DVEKFDELYVVLEIA-DSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCD 199 (458)
T ss_dssp CTTTCCCEEEEECCC-SEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECC
T ss_pred CcccCceEEEEEecc-ccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecc
Confidence 35679999998 579999987754 69999999999999999999999 9999999999999999999999999
Q ss_pred ccchhhhhccCCC------------------------CcceecccccccccCcccc-ccCCCCccccchhHHHHHHHHHh
Q 003199 680 FGIAKVLQARGGK------------------------DSTTTVIAGTYGYLAPEYA-YSSKATTKCDVYSFGVVLMELIT 734 (840)
Q Consensus 680 fg~a~~~~~~~~~------------------------~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~il~el~t 734 (840)
||+|+........ ........||+.|+|||++ .+..++.++|||||||++|||++
T Consensus 200 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 200 FGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp CTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred cccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 9999876432111 0123456789999999976 55679999999999999999999
Q ss_pred C
Q 003199 735 G 735 (840)
Q Consensus 735 g 735 (840)
|
T Consensus 280 g 280 (458)
T 3rp9_A 280 M 280 (458)
T ss_dssp T
T ss_pred h
Confidence 3
No 203
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=7.2e-39 Score=336.28 Aligned_cols=250 Identities=26% Similarity=0.348 Sum_probs=194.9
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC-
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL- 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~- 604 (840)
++|+..+.||+|+||.||+|... |+.||||++.... ..+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~------------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA------------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEK 87 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC--------------HHHHHTHHHHTTCCCTTBCCEEEEECCC-
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh------------HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 57888899999999999999876 8999999984322 235688999999999999999999987554
Q ss_pred ccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
...++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 164 (278)
T 1byg_A 88 GGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLT 164 (278)
T ss_dssp -CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred CceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeecccc
Confidence 57899999999999999997653 237899999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
+.... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ...... .
T Consensus 165 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~----~----- 227 (278)
T 1byg_A 165 KEASS------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPR----V----- 227 (278)
T ss_dssp -----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHHH----H-----
T ss_pred ccccc------cccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHH----H-----
Confidence 76532 1223457889999999998899999999999999999998 9999975311 111100 0
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCC
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADP 812 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~ 812 (840)
.......... .....+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 228 -~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 228 -EKGYKMDAPD---GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp -TTTCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -hcCCCCCCcc---cCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 0000111112 223456778889999999999999999999987643
No 204
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.6e-38 Score=334.93 Aligned_cols=253 Identities=25% Similarity=0.387 Sum_probs=204.1
Q ss_pred HHHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 522 REILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 522 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
.....+|+..+.||+|+||.||+|... +|+.||||++.... +.+.+|++++++++||||++++++
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------------~~~~~e~~~l~~l~h~~i~~~~~~ 72 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------------EKAEREVKALAKLDHVNIVHYNGC 72 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------------GGGHHHHHHHHHCCCTTBCCEEEE
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------------HHHHHHHHHHHhCCCCCEEEEeee
Confidence 345678999999999999999999765 79999999985432 235679999999999999999998
Q ss_pred Eec----------------CccceEEEeecCCCChHHHhhcC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCC
Q 003199 601 FSS----------------LYCNLLVYEYMPNGNLWDALHKG-LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIK 663 (840)
Q Consensus 601 ~~~----------------~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk 663 (840)
+.. ....++||||+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+|||||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlk 149 (284)
T 2a19_B 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLK 149 (284)
T ss_dssp EEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCS
T ss_pred EeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCC
Confidence 854 44578999999999999999754 2468999999999999999999999 999999999
Q ss_pred CCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCC
Q 003199 664 STNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDF 743 (840)
Q Consensus 664 ~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~ 743 (840)
|+||+++.++.+||+|||+++..... .......||+.|+|||.+.+..++.++||||||+++|||++|..|+...
T Consensus 150 p~Nil~~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~- 224 (284)
T 2a19_B 150 PSNIFLVDTKQVKIGDFGLVTSLKND----GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET- 224 (284)
T ss_dssp GGGEEEEETTEEEECCCTTCEESSCC----SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-
T ss_pred HHHEEEcCCCCEEECcchhheecccc----ccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-
Confidence 99999999999999999999776431 2233456899999999999989999999999999999999999886421
Q ss_pred CCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCC
Q 003199 744 GDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRF 815 (840)
Q Consensus 744 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 815 (840)
..+. .......+...+. ..+.+++.+|++.||++|||+.|++++|+.+.....
T Consensus 225 ------~~~~----------~~~~~~~~~~~~~---~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 225 ------SKFF----------TDLRDGIISDIFD---KKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp ------HHHH----------HHHHTTCCCTTSC---HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred ------HHHH----------HHhhcccccccCC---HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 0000 1111111222222 345678889999999999999999999998765443
No 205
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=6.3e-39 Score=345.10 Aligned_cols=267 Identities=19% Similarity=0.266 Sum_probs=193.2
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
...++|+..+.||+|+||+||+|.. .+|+.||||++...... ....+.+.+|++++++++||||+++++++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 102 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEE--------EGVPGTAIREVSLLKELQHRNIIELKSVI 102 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC----------------CHHHHHHGGGCCCTTBCCEEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccc--------cccchhHHHHHHHHHHcCCCCcceEEEEE
Confidence 3456899999999999999999954 57999999998543211 22345677899999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEc-----CCCCCe
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLD-----VNYQPK 676 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-----~~~~~k 676 (840)
.+....++||||++ |+|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++ .++.+|
T Consensus 103 ~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~k 177 (329)
T 3gbz_A 103 HHNHRLHLIFEYAE-NDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLK 177 (329)
T ss_dssp EETTEEEEEEECCS-EEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEE
T ss_pred ecCCEEEEEEecCC-CCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEE
Confidence 99999999999997 59999998765 68999999999999999999999 9999999999999994 445599
Q ss_pred eecccchhhhhccCCCCcceecccccccccCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhh
Q 003199 677 VADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSS-KATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSI 755 (840)
Q Consensus 677 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 755 (840)
|+|||+++.... .........||+.|+|||++.+. .++.++|||||||++|||++|+.||...... .........
T Consensus 178 l~Dfg~a~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~ 253 (329)
T 3gbz_A 178 IGDFGLARAFGI---PIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEV 253 (329)
T ss_dssp ECCTTHHHHHC--------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHH
T ss_pred ECcCCCccccCC---cccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHH
Confidence 999999987643 12233455789999999998774 4899999999999999999999999753211 000000000
Q ss_pred h-hccccch---------hhhcccccCCCcHH-----HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 756 K-VDTKEGI---------MEVLDKKLSGSFRD-----EMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 756 ~-~~~~~~~---------~~~~~~~~~~~~~~-----~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
. ....... .............. ....+.+++.+|++.||++|||+.|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 254 LGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp HCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCC
Confidence 0 0000000 00000000011111 23567788999999999999999999975
No 206
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.6e-39 Score=345.30 Aligned_cols=270 Identities=24% Similarity=0.322 Sum_probs=194.6
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHH--HHHHHHhccCCCCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLK--TEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~--~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
++|...+.||+|+||.||+|.. +++.||||++.... ...+. .|+..+..++||||+++++++..
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-------------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~ 78 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-------------RQNFINEKNIYRVPLMEHDNIARFIVGDER 78 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-------------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-------------hhhHHHHHHHHHHHhccCcchhhheecccc
Confidence 4678889999999999999976 58999999984321 12233 34444556899999999985532
Q ss_pred -----CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCC---------CeEecCCCCCCEEE
Q 003199 604 -----LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLS---------PIIHRDIKSTNILL 669 (840)
Q Consensus 604 -----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~---------~ivH~Dlk~~Nill 669 (840)
....++||||+++|+|.+++... ..++..+..++.|++.||+|||+ . +|+||||||+|||+
T Consensus 79 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill 153 (336)
T 3g2f_A 79 VTADGRMEYLLVMEYYPNGSLXKYLSLH--TSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLV 153 (336)
T ss_dssp ECTTSCEEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEE
T ss_pred cccCCCceEEEEEecCCCCcHHHHHhhc--ccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEE
Confidence 33568999999999999999876 45899999999999999999999 7 99999999999999
Q ss_pred cCCCCCeeecccchhhhhccCC-----CCcceecccccccccCcccccc-------CCCCccccchhHHHHHHHHHhCCC
Q 003199 670 DVNYQPKVADFGIAKVLQARGG-----KDSTTTVIAGTYGYLAPEYAYS-------SKATTKCDVYSFGVVLMELITGRK 737 (840)
Q Consensus 670 ~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~il~el~tg~~ 737 (840)
+.++.+||+|||+++.+..... .........||+.|+|||++.+ ..++.++|||||||++|||++|..
T Consensus 154 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~ 233 (336)
T 3g2f_A 154 KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCT 233 (336)
T ss_dssp CTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBG
T ss_pred cCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCC
Confidence 9999999999999987643211 1122334579999999999876 456779999999999999999977
Q ss_pred CCCCCCCCCcchhhhhhhhhc--cccchh-----hhcccccCCC---cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 738 PVEDDFGDNKNIIYWVSIKVD--TKEGIM-----EVLDKKLSGS---FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 738 p~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
||............+...... ...... ......++.. .......+.+++.+||+.||++|||++|+++.|
T Consensus 234 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L 313 (336)
T 3g2f_A 234 DLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERM 313 (336)
T ss_dssp GGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHH
T ss_pred cCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHH
Confidence 764322211111111000000 000000 0001111111 123566788999999999999999999999999
Q ss_pred hhcCCCC
Q 003199 808 AEADPCR 814 (840)
Q Consensus 808 ~~~~~~~ 814 (840)
+++-...
T Consensus 314 ~~ll~~~ 320 (336)
T 3g2f_A 314 AELMMIW 320 (336)
T ss_dssp HHHHHCC
T ss_pred HHHHHHH
Confidence 8755433
No 207
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.8e-38 Score=333.00 Aligned_cols=248 Identities=25% Similarity=0.353 Sum_probs=194.8
Q ss_pred cCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec---
Q 003199 528 MTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS--- 603 (840)
Q Consensus 528 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--- 603 (840)
|...+.||+|+||.||+|.. .++..||+|++...... ....+.+.+|+.++++++||||+++++++..
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 99 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLT--------KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVK 99 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSC--------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESS
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhC--------HHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccC
Confidence 56677899999999999965 47889999998543211 2335778999999999999999999998865
Q ss_pred -CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCCEEEc-CCCCCeeec
Q 003199 604 -LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSP--IIHRDIKSTNILLD-VNYQPKVAD 679 (840)
Q Consensus 604 -~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~-~~~~~kl~D 679 (840)
....++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+ |+||||||+||+++ .++.+||+|
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~D 175 (290)
T 1t4h_A 100 GKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGD 175 (290)
T ss_dssp SCEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECC
T ss_pred CCceEEEEEEecCCCCHHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEee
Confidence 456799999999999999998754 68999999999999999999999 77 99999999999998 789999999
Q ss_pred ccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcc
Q 003199 680 FGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDT 759 (840)
Q Consensus 680 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 759 (840)
||++..... .......||+.|+|||.+. +.++.++||||+|+++|||++|+.||..... ...........
T Consensus 176 fg~~~~~~~-----~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~ 245 (290)
T 1t4h_A 176 LGLATLKRA-----SFAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSG 245 (290)
T ss_dssp TTGGGGCCT-----TSBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTTT
T ss_pred CCCcccccc-----cccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCc----HHHHHHHHhcc
Confidence 999975422 2334557999999999876 4689999999999999999999999975311 11111100000
Q ss_pred ccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 760 KEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
. ........ ....+.+++.+||+.||++|||+.|++++
T Consensus 246 ~------~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 246 V------KPASFDKV---AIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp C------CCGGGGGC---CCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred C------CccccCCC---CCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0 00011111 12457788889999999999999999976
No 208
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.6e-39 Score=341.07 Aligned_cols=265 Identities=26% Similarity=0.382 Sum_probs=196.9
Q ss_pred HhcCccCeeeccCCcEEEEEEeC--CCc--EEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN--SGE--VVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
++|+..+.||+|+||.||+|.+. +++ .||||++..... ......+.+.+|++++++++||||+++++++
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 90 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVL-------SQPEAMDDFIREVNAMHSLDHRNLIRLYGVV 90 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------------CHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCcc-------CCHHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence 46888899999999999999653 333 689998853321 1123457789999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
.... .++||||+++++|.+++......+++..+..++.|++.||+|||+ ++++||||||+||+++.++.+||+|||
T Consensus 91 ~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg 166 (291)
T 1u46_A 91 LTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFG 166 (291)
T ss_dssp CSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCT
T ss_pred ccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEcccc
Confidence 8765 789999999999999998765568999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
+++................+|+.|+|||.+.+..++.++||||||+++|||++ |+.||..... .. .........
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~---~~~~~~~~~ 241 (291)
T 1u46_A 167 LMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--SQ---ILHKIDKEG 241 (291)
T ss_dssp TCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HH---HHHHHHTSC
T ss_pred ccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--HH---HHHHHHccC
Confidence 99876443222223344567889999999988889999999999999999999 9999975311 11 110000000
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCC
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRF 815 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 815 (840)
............+.+++.+|++.||++|||+.+++++|+++.+...
T Consensus 242 ---------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 287 (291)
T 1u46_A 242 ---------ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDM 287 (291)
T ss_dssp ---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred ---------CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccch
Confidence 0001111233567788889999999999999999999998876554
No 209
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.7e-38 Score=359.25 Aligned_cols=256 Identities=24% Similarity=0.315 Sum_probs=202.9
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
+.|...+.||+|+||+||+|..+ +|+.||||++...... .......+.+|++++++++||||+++++++.+.
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~-------~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~ 257 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK-------KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETK 257 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHH-------HTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhh-------hhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeC
Confidence 45777889999999999999765 7999999998543211 122346788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcC---CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 605 YCNLLVYEYMPNGNLWDALHKG---LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
...++||||+++|+|.+++... ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 258 ~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFG 334 (543)
T 3c4z_A 258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLG 334 (543)
T ss_dssp SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCT
T ss_pred CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecc
Confidence 9999999999999999998764 2368999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
+++..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...........
T Consensus 335 la~~~~~~---~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~-~~~~~~~i~~~-- 408 (543)
T 3c4z_A 335 LAVELKAG---QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE-NKELKQRVLEQ-- 408 (543)
T ss_dssp TCEECCTT---CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCC-HHHHHHHHHHC--
T ss_pred eeeeccCC---CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchh-HHHHHHHHhhc--
Confidence 99875431 1223345899999999999999999999999999999999999999976422111 11111111100
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTM-----NEVVQL 806 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~evl~~ 806 (840)
....+..+ ...+.+++.+|++.||++||++ .+++++
T Consensus 409 ------~~~~p~~~---s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 409 ------AVTYPDKF---SPASKDFCEALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp ------CCCCCTTS---CHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred ------ccCCCccc---CHHHHHHHHHhccCCHhHCCCCcccCHHHHHcC
Confidence 01112222 3456677889999999999964 777765
No 210
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.9e-38 Score=344.90 Aligned_cols=197 Identities=27% Similarity=0.339 Sum_probs=172.5
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-----CCCcceee
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-----HKNIVKLY 598 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l~ 598 (840)
.++|...+.||+|+||+||+|.. .+++.||||++... ......+..|+++++.+. ||||++++
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----------~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-----------KKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----------HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-----------hhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 46788999999999999999966 57899999998421 233456778999999886 99999999
Q ss_pred eEEecCccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC------
Q 003199 599 CYFSSLYCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV------ 671 (840)
Q Consensus 599 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~------ 671 (840)
+++...+..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+ ++||||||||+|||++.
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~ 178 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKS 178 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEE
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEcccccccc
Confidence 9999999999999999 999999998753 358999999999999999999999 99999999999999975
Q ss_pred -------------------CCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHH
Q 003199 672 -------------------NYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMEL 732 (840)
Q Consensus 672 -------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el 732 (840)
++.+||+|||+|+.... ......||+.|+|||++.+..++.++|||||||++|||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 252 (360)
T 3llt_A 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD------YHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252 (360)
T ss_dssp EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS------CCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred ccchhcccccccccccccCCCCEEEEeccCceecCC------CCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHH
Confidence 78899999999976432 22345789999999999999999999999999999999
Q ss_pred HhCCCCCCCC
Q 003199 733 ITGRKPVEDD 742 (840)
Q Consensus 733 ~tg~~p~~~~ 742 (840)
++|+.||...
T Consensus 253 l~g~~pf~~~ 262 (360)
T 3llt_A 253 YTGSLLFRTH 262 (360)
T ss_dssp HHSSCSCCCS
T ss_pred HHCCCCCCCC
Confidence 9999999753
No 211
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.6e-38 Score=334.85 Aligned_cols=250 Identities=25% Similarity=0.391 Sum_probs=202.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|...+.||+|+||.||+|... +++.||||++..... ......+.+.+|++++++++||||+++++++.+.
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 86 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQL-------EKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDR 86 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHH-------HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEccccc-------chHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcC
Confidence 56888899999999999999665 688999999843221 1122346788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~ 162 (284)
T 2vgo_A 87 KRIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSV 162 (284)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccc
Confidence 99999999999999999998764 68999999999999999999999 999999999999999999999999999986
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
.... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... . ........
T Consensus 163 ~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~-~~~~~~~~------ 226 (284)
T 2vgo_A 163 HAPS-----LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH----T-ETHRRIVN------ 226 (284)
T ss_dssp ECSS-----SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH----H-HHHHHHHT------
T ss_pred cCcc-----cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH----h-HHHHHHhc------
Confidence 5422 223345789999999999998999999999999999999999999975311 0 00000000
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.+...+..+ ...+.+++.+|++.||.+||++.+++++-
T Consensus 227 --~~~~~~~~~---~~~~~~li~~~l~~~p~~Rps~~~ll~h~ 264 (284)
T 2vgo_A 227 --VDLKFPPFL---SDGSKDLISKLLRYHPPQRLPLKGVMEHP 264 (284)
T ss_dssp --TCCCCCTTS---CHHHHHHHHHHSCSSGGGSCCHHHHHTCH
T ss_pred --cccCCCCcC---CHHHHHHHHHHhhcCHhhCCCHHHHhhCH
Confidence 011122222 24566788899999999999999999863
No 212
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.7e-38 Score=360.97 Aligned_cols=255 Identities=26% Similarity=0.367 Sum_probs=198.7
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
.+.+.|...+.||+|+||+||+|... ++..||||++...... ......+.+|+.+++.++||||+++++++
T Consensus 34 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--------~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 105 (494)
T 3lij_A 34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVS--------TSSNSKLLEEVAVLKLLDHPNIMKLYDFF 105 (494)
T ss_dssp CHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------------CTTHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred chhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccC--------chHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 46678999999999999999999664 7899999998644321 11235688999999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC---CCCCeee
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV---NYQPKVA 678 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~~~~kl~ 678 (840)
.+....++||||+++|+|.+.+.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++. ++.+||+
T Consensus 106 ~~~~~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 181 (494)
T 3lij_A 106 EDKRNYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIV 181 (494)
T ss_dssp ECSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EeCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEE
Confidence 99999999999999999999887654 68999999999999999999999 99999999999999976 4459999
Q ss_pred cccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
|||+++.... ........||+.|+|||++. ..++.++||||+||++|+|++|+.||.+... ... ......
T Consensus 182 DfG~a~~~~~----~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~---~~~i~~ 251 (494)
T 3lij_A 182 DFGLSAVFEN----QKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--QEI---LRKVEK 251 (494)
T ss_dssp CCTTCEECBT----TBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHH---HHHHHH
T ss_pred ECCCCeECCC----CccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH--HHH---HHHHHh
Confidence 9999977632 22334567999999999876 5699999999999999999999999975311 111 100000
Q ss_pred cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 759 TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
... ....+.+......+.+++.+|++.||.+|||+.|++++
T Consensus 252 ~~~-------~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 252 GKY-------TFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp TCC-------CCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred CCC-------CCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 000 00011112234557778889999999999999999976
No 213
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.7e-38 Score=333.06 Aligned_cols=250 Identities=25% Similarity=0.377 Sum_probs=193.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|...+.||+|+||.||+|... +|+.||||++..... ......+.+.+|+.+++.++||||+++++++...
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 83 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKI-------RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP 83 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-------HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccc-------cchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 46788899999999999999765 799999999843221 1123356788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 159 (276)
T 2h6d_A 84 TDFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSN 159 (276)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGG
T ss_pred CeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeeccccc
Confidence 99999999999999999997764 68999999999999999999999 899999999999999999999999999997
Q ss_pred hhhccCCCCcceecccccccccCccccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccch
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKA-TTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGI 763 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 763 (840)
.... ........||+.|+|||.+.+..+ +.++||||||+++|||++|+.||.... ............
T Consensus 160 ~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~--- 227 (276)
T 2h6d_A 160 MMSD----GEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH-----VPTLFKKIRGGV--- 227 (276)
T ss_dssp CCCC-----------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCC---
T ss_pred ccCC----CcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHhhcCc---
Confidence 6532 122334578999999999987765 689999999999999999999997531 111110000000
Q ss_pred hhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 764 MEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 764 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
...+.. ....+.+++.+|++.||++|||+.|++++
T Consensus 228 -----~~~~~~---~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 228 -----FYIPEY---LNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp -----CCCCTT---SCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred -----ccCchh---cCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 011112 22456678889999999999999999986
No 214
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2e-38 Score=360.16 Aligned_cols=257 Identities=25% Similarity=0.357 Sum_probs=205.5
Q ss_pred HHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
+.++|...+.||+|+||.||+|... +|+.||||++....... ....+.+.+|+.++++++||||+++++++.
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 96 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-------KTDKESLLREVQLLKQLDHPNIMKLYEFFE 96 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB-------SSCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc-------chHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 4578999999999999999999665 79999999985443211 122467889999999999999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE---cCCCCCeeec
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL---DVNYQPKVAD 679 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~D 679 (840)
+....++||||+.+|+|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|
T Consensus 97 ~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 172 (484)
T 3nyv_A 97 DKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIID 172 (484)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECC
T ss_pred eCCEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEe
Confidence 9999999999999999999997764 68999999999999999999999 999999999999999 4678999999
Q ss_pred ccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcc
Q 003199 680 FGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDT 759 (840)
Q Consensus 680 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 759 (840)
||+++.+.. ........||+.|+|||++.+ .++.++||||+||++|||++|+.||.+.. .......+ ...
T Consensus 173 fg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~~i---~~~ 242 (484)
T 3nyv_A 173 FGLSTHFEA----SKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN--EYDILKKV---EKG 242 (484)
T ss_dssp TTHHHHBCC----CCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH---HHC
T ss_pred eeeeEEccc----ccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC--HHHHHHHH---HcC
Confidence 999987643 223345679999999998866 68999999999999999999999997531 11111100 000
Q ss_pred ccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 760 KEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 760 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
.. . ...+.+......+.+++.+|++.||.+|||+.|++++-.
T Consensus 243 ~~------~-~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~ 284 (484)
T 3nyv_A 243 KY------T-FELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284 (484)
T ss_dssp CC------C-CCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHH
T ss_pred CC------C-CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChh
Confidence 00 0 001112233456778888999999999999999998743
No 215
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.6e-38 Score=338.07 Aligned_cols=251 Identities=27% Similarity=0.402 Sum_probs=203.8
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
+.|...+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|+.+++.++||||+++++++.+.
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 92 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE---------DEIEDIQQEITVLSQCDSPYVTKYYGSYLKD 92 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS---------TTHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH---------HHHHHHHHHHHHHHhCCCCCEeEEEEEEecC
Confidence 4588889999999999999965 57899999998543311 2246788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.
T Consensus 93 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~ 167 (303)
T 3a7i_A 93 TKLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAG 167 (303)
T ss_dssp TEEEEEEECCTTEEHHHHHTTS--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CeEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccce
Confidence 9999999999999999999764 68999999999999999999999 999999999999999999999999999997
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
..... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ... .... .
T Consensus 168 ~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~---~~~~-------~ 232 (303)
T 3a7i_A 168 QLTDT---QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--MKV---LFLI-------P 232 (303)
T ss_dssp ECBTT---BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHH---HHHH-------H
T ss_pred ecCcc---ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--HHH---HHHh-------h
Confidence 65431 2223456789999999999999999999999999999999999999975311 000 0000 0
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
..........+ ...+.+++.+||+.||++|||+.|++++..
T Consensus 233 ~~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 233 KNNPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp HSCCCCCCSSC---CHHHHHHHHHHCCSSGGGSCCHHHHTTCHH
T ss_pred cCCCCCCcccc---CHHHHHHHHHHcCCChhhCcCHHHHhhChh
Confidence 00111122222 245667888999999999999999998754
No 216
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.3e-38 Score=334.51 Aligned_cols=249 Identities=19% Similarity=0.299 Sum_probs=197.9
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCY 600 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 600 (840)
...++|+..+.||+|+||.||+|... +++.||||++...... ......+.+|+..+..+ +||||++++++
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~~~~e~~~~~~l~~h~~iv~~~~~ 79 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAG--------SVDEQNALREVYAHAVLGQHSHVVRYFSA 79 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTT--------SHHHHHHHHHHHHHHHSCSCTTBCCEEEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccc--------cHHHHHHHHHHHHHHHhCCCCCeeeeeee
Confidence 34578999999999999999999665 7999999998543211 12346678899999999 89999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCC---CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCC-----
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGL---VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVN----- 672 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~----- 672 (840)
+.+.+..++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.+
T Consensus 80 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~ 156 (289)
T 1x8b_A 80 WAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNA 156 (289)
T ss_dssp EEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC-------
T ss_pred eecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcc
Confidence 999999999999999999999997641 468999999999999999999999 999999999999999844
Q ss_pred --------------CCCeeecccchhhhhccCCCCcceecccccccccCccccccC-CCCccccchhHHHHHHHHHhCCC
Q 003199 673 --------------YQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSS-KATTKCDVYSFGVVLMELITGRK 737 (840)
Q Consensus 673 --------------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~ 737 (840)
..+||+|||.+...... ....||+.|+|||.+.+. .++.++||||||+++|||++|.+
T Consensus 157 ~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~ 229 (289)
T 1x8b_A 157 ASEEGDEDDWASNKVMFKIGDLGHVTRISSP-------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEP 229 (289)
T ss_dssp -------------CCCEEECCCTTCEETTCS-------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCC
T ss_pred cccccccccccCCceEEEEcccccccccCCc-------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCC
Confidence 47899999999765431 223589999999998766 56789999999999999999988
Q ss_pred CCCCCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 738 PVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 738 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
|+... . .+..... ...+.++..+ ...+.+++.+|++.||++|||+.|++++-
T Consensus 230 ~~~~~----~---~~~~~~~--------~~~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 281 (289)
T 1x8b_A 230 LPRNG----D---QWHEIRQ--------GRLPRIPQVL---SQEFTELLKVMIHPDPERRPSAMALVKHS 281 (289)
T ss_dssp CCSSS----H---HHHHHHT--------TCCCCCSSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred CCcch----h---HHHHHHc--------CCCCCCCccc---CHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence 76432 1 1111100 0011122222 34566788899999999999999999764
No 217
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-38 Score=345.70 Aligned_cols=261 Identities=22% Similarity=0.311 Sum_probs=194.3
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.+.|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+++++.++||||+++++++..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~ 95 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQ--------SELFAKRAYRELRLLKHMRHENVIGLLDVFTP 95 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTS--------SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECS
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCcccc--------CHHHHHHHHHHHHHHHhCCCcCCCCceeeEec
Confidence 35688889999999999999965 5799999999844321 13345678899999999999999999999976
Q ss_pred Cc------cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCee
Q 003199 604 LY------CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKV 677 (840)
Q Consensus 604 ~~------~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 677 (840)
.. ..++||||+ +++|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl 169 (367)
T 1cm8_A 96 DETLDDFTDFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKI 169 (367)
T ss_dssp CSSTTTCCCCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEE
T ss_pred CCccccCceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEE
Confidence 53 459999999 88999999874 68999999999999999999999 99999999999999999999999
Q ss_pred ecccchhhhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhh
Q 003199 678 ADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIK 756 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 756 (840)
+|||+++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.... ..+.......
T Consensus 170 ~Dfg~a~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~ 242 (367)
T 1cm8_A 170 LDFGLARQADS------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVT 242 (367)
T ss_dssp CCCTTCEECCS------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHH
T ss_pred Eeeeccccccc------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhc
Confidence 99999976432 2334578999999999877 67999999999999999999999999753210 0000000000
Q ss_pred hccccch---------h---h----hcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 757 VDTKEGI---------M---E----VLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 757 ~~~~~~~---------~---~----~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
....... . . .....+...+......+.+++.+|++.||++|||+.|++++
T Consensus 243 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 243 GTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcC
Confidence 0000000 0 0 00001111112234567788889999999999999999997
No 218
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.3e-38 Score=335.41 Aligned_cols=252 Identities=22% Similarity=0.357 Sum_probs=204.0
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
.+|...+.||+|+||.||+|... +++.||+|++...... .....+.+.+|+.+++.++||||+++++++.+.
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 87 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-------KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN 87 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-------SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhcc-------CHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccC
Confidence 56788899999999999999665 6889999998543211 123456788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
+..++||||+++++|.+++.... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 163 (294)
T 2rku_A 88 DFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLAT 163 (294)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred CEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCce
Confidence 99999999999999999887654 68999999999999999999999 999999999999999999999999999997
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
..... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ...+.... ..
T Consensus 164 ~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~-~~----- 230 (294)
T 2rku_A 164 KVEYD---GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL----KETYLRIK-KN----- 230 (294)
T ss_dssp ECCST---TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHH-TT-----
T ss_pred ecccC---ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHh-hc-----
Confidence 65321 2223446789999999999988899999999999999999999999975311 00111100 00
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
....+... ...+.+++.+|++.||++|||+.|++++-
T Consensus 231 ---~~~~~~~~---~~~~~~li~~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 231 ---EYSIPKHI---NPVAASLIQKMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp ---CCCCCTTS---CHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ---cCCCcccc---CHHHHHHHHHHcccChhhCcCHHHHhhCh
Confidence 00111222 24566788899999999999999999864
No 219
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=7.2e-39 Score=345.21 Aligned_cols=266 Identities=26% Similarity=0.341 Sum_probs=198.9
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||.||+|... +|+.||||++..... .....+.+.+|+.++++++||||+++++++.+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 95 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDD--------DKMVKKIAMREIKLLKQLRHENLVNLLEVCKK 95 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSS--------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCC--------chHHHHHHHHHHHHHhhCCCCCEeeEEEEeec
Confidence 357888999999999999999665 689999999854321 13345668899999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+++++|.++..... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 171 (331)
T 4aaa_A 96 KKRWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFA 171 (331)
T ss_dssp TTEEEEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCc
Confidence 999999999999999888766543 68999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc----
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSS-KATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD---- 758 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~---- 758 (840)
+..... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||....... ...........
T Consensus 172 ~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~ 247 (331)
T 4aaa_A 172 RTLAAP---GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPR 247 (331)
T ss_dssp ---------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHH
T ss_pred eeecCC---ccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChh
Confidence 776432 2223445789999999998775 68999999999999999999999997532110 00000000000
Q ss_pred ------cccchhhhcccccC-CC-----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 759 ------TKEGIMEVLDKKLS-GS-----FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 759 ------~~~~~~~~~~~~~~-~~-----~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
..........+... .. +......+.+++.+|++.||++|||+.|++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 248 HQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp HHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred hhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00000000000000 00 11234567889999999999999999999876
No 220
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.8e-38 Score=335.60 Aligned_cols=252 Identities=23% Similarity=0.307 Sum_probs=185.1
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||.||+|.. .+|+.||||++..... .....+.+.++...++.++||||+++++++.+.
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~ 78 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--------SQEQKRLLMDLDISMRTVDCPFTVTFYGALFRE 78 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C--------HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC--------cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeecc
Confidence 5688899999999999999965 5799999999854321 122334455666668888999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhc---CCCCCChHHHHHHHHHHHHHHHHHhhcCCC-CeEecCCCCCCEEEcCCCCCeeecc
Q 003199 605 YCNLLVYEYMPNGNLWDALHK---GLVHLDWPTRHKIAFGVAQGLAYLHHGLLS-PIIHRDIKSTNILLDVNYQPKVADF 680 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlk~~Nill~~~~~~kl~Df 680 (840)
...++||||++ |+|.+++.. ....+++..+..++.|++.||+|||+ + +|+||||||+||+++.++.+||+||
T Consensus 79 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Df 154 (290)
T 3fme_A 79 GDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDF 154 (290)
T ss_dssp SSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC
T ss_pred CCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeec
Confidence 99999999997 588777654 34579999999999999999999999 7 9999999999999999999999999
Q ss_pred cchhhhhccCCCCcceecccccccccCcccc----ccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhh
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYA----YSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIK 756 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 756 (840)
|+++.... ........||+.|+|||.+ .+..++.++||||+|+++|||++|+.||..... .........
T Consensus 155 g~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~ 227 (290)
T 3fme_A 155 GISGYLVD----DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT---PFQQLKQVV 227 (290)
T ss_dssp -------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC---HHHHHHHHH
T ss_pred CCcccccc----cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc---hHHHHHHHh
Confidence 99987643 2223345799999999996 556789999999999999999999999974211 111111100
Q ss_pred hccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 757 VDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
... ..... .......+.+++.+|++.||++|||+.|++++
T Consensus 228 ~~~--------~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 228 EEP--------SPQLP--ADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp HSC--------CCCCC--TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ccC--------CCCcc--cccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence 000 00000 11223456778889999999999999999885
No 221
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-39 Score=349.03 Aligned_cols=260 Identities=25% Similarity=0.298 Sum_probs=201.3
Q ss_pred HhcCccCeeeccCCcEEEEEEe----CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL----NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCY 600 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 600 (840)
++|...+.||+|+||.||+|.. .+|+.||||++........ ....+.+.+|+++++.+ .||||++++++
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 127 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQK------AKTTEHTRTERQVLEHIRQSPFLVTLHYA 127 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEE------ESSGGGCCCHHHHHHHHHTCTTBCCEEEE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhh------hhHHHHHHHHHHHHHHccCCCceeEEEEE
Confidence 5788899999999999999976 4789999999864331110 01123456789999999 69999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecc
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADF 680 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Df 680 (840)
+......++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 128 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Df 203 (355)
T 1vzo_A 128 FQTETKLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDF 203 (355)
T ss_dssp EEETTEEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCS
T ss_pred EeeCceEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeC
Confidence 999999999999999999999998754 68999999999999999999999 99999999999999999999999999
Q ss_pred cchhhhhccCCCCcceecccccccccCcccccc--CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS--SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
|+++.+... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..........
T Consensus 204 G~a~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~ 280 (355)
T 1vzo_A 204 GLSKEFVAD--ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILK 280 (355)
T ss_dssp SEEEECCGG--GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHHH
T ss_pred CCCeecccC--CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccch-HHHHHHHHhc
Confidence 999765321 1222345679999999999875 3478999999999999999999999975322211 1111111000
Q ss_pred cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHhhh
Q 003199 759 TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRP-----TMNEVVQLLAE 809 (840)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rp-----s~~evl~~L~~ 809 (840)
........ ....+.+++.+||+.||++|| ++.|++++..-
T Consensus 281 --------~~~~~~~~---~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f 325 (355)
T 1vzo_A 281 --------SEPPYPQE---MSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF 325 (355)
T ss_dssp --------CCCCCCTT---SCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred --------cCCCCCcc---cCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcch
Confidence 01111222 234566788899999999999 99999988653
No 222
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.3e-38 Score=358.67 Aligned_cols=261 Identities=25% Similarity=0.355 Sum_probs=201.4
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccc---cCchhhHHHHHHHHHHHHHHhccCCCCcceee
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVS---ASDTDQLQLDKGLKTEVETLGNIRHKNIVKLY 598 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~---~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 598 (840)
.+.+.|...+.||+|+||+||+|... +++.||||++........ ..........+.+.+|+.++++++||||++++
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 35578999999999999999999654 689999999865432110 00011123457789999999999999999999
Q ss_pred eEEecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCC---CC
Q 003199 599 CYFSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNY---QP 675 (840)
Q Consensus 599 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~---~~ 675 (840)
+++.+....++||||+++|+|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~ 188 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNI 188 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSE
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccE
Confidence 99999999999999999999999987654 69999999999999999999999 9999999999999998776 68
Q ss_pred eeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhh
Q 003199 676 KVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSI 755 (840)
Q Consensus 676 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 755 (840)
||+|||+++.... ........||+.|+|||++. +.++.++||||+||++|+|++|+.||.+... .. ...
T Consensus 189 kl~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~---~~~- 257 (504)
T 3q5i_A 189 KIVDFGLSSFFSK----DYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND--QD---IIK- 257 (504)
T ss_dssp EECCCTTCEECCT----TSCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HH---HHH-
T ss_pred EEEECCCCEEcCC----CCccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HH---HHH-
Confidence 9999999987633 22334567999999999876 4689999999999999999999999975311 11 110
Q ss_pred hhccccchhhhcccccCCC---cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 756 KVDTKEGIMEVLDKKLSGS---FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.+........ +......+.+++.+|++.||.+|||+.|++++-
T Consensus 258 ---------~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~ 303 (504)
T 3q5i_A 258 ---------KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303 (504)
T ss_dssp ---------HHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred ---------HHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCH
Confidence 0001111000 112235677888899999999999999999874
No 223
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.6e-39 Score=355.02 Aligned_cols=243 Identities=17% Similarity=0.153 Sum_probs=186.5
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHH---HHHhccCCCCcceee---
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEV---ETLGNIRHKNIVKLY--- 598 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~---~~l~~l~h~niv~l~--- 598 (840)
+.|...+.||+|+||.||+|.. .+|+.||||++...... .....+.+.+|+ +.+++++||||++++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-------~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~ 145 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-------PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRF 145 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-------CTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCB
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-------chHHHHHHHHHHHHHHhccccCCHHHHHHHhhh
Confidence 4677788999999999999975 57999999998643211 122356788999 555666899999998
Q ss_pred ----eEEecCc-----------------cceEEEeecCCCChHHHhhcCCC------CCChHHHHHHHHHHHHHHHHHhh
Q 003199 599 ----CYFSSLY-----------------CNLLVYEYMPNGNLWDALHKGLV------HLDWPTRHKIAFGVAQGLAYLHH 651 (840)
Q Consensus 599 ----~~~~~~~-----------------~~~lV~e~~~~gsL~~~l~~~~~------~~~~~~~~~i~~~i~~~l~~LH~ 651 (840)
+++.+.. ..++||||+ +|+|.+++..... .+++..+..++.||+.||+|||+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 224 (377)
T 3byv_A 146 IFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH 224 (377)
T ss_dssp CCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence 5555443 268999999 6899999986421 23358888999999999999999
Q ss_pred cCCCCeEecCCCCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccC-----------CCCccc
Q 003199 652 GLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSS-----------KATTKC 720 (840)
Q Consensus 652 ~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~ 720 (840)
++|+||||||+|||++.++.+||+|||+|+... .......| +.|+|||++.+. .++.++
T Consensus 225 ---~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T 3byv_A 225 ---YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSF 294 (377)
T ss_dssp ---TTEECSCCCGGGEEECTTCCEEECCGGGCEETT------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHH
T ss_pred ---CCeecCCCCHHHEEEcCCCCEEEEechhheecC------CcccCCCC-cCccChhhhcccccccccccccccCChhh
Confidence 999999999999999999999999999997532 13345567 999999999887 899999
Q ss_pred cchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 003199 721 DVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTM 800 (840)
Q Consensus 721 Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~ 800 (840)
|||||||++|||++|+.||........ ...... .. .. ....+.+++.+||+.||++|||+
T Consensus 295 DvwSlG~il~elltg~~Pf~~~~~~~~---------------~~~~~~-~~-~~---~~~~~~~li~~~L~~dp~~Rpt~ 354 (377)
T 3byv_A 295 DAWALGLVIYWIWCADLPITKDAALGG---------------SEWIFR-SC-KN---IPQPVRALLEGFLRYPKEDRLLP 354 (377)
T ss_dssp HHHHHHHHHHHHHHSSCCC------CC---------------SGGGGS-SC-CC---CCHHHHHHHHHHTCSSGGGCCCH
T ss_pred hHHHHHHHHHHHHHCCCCCcccccccc---------------hhhhhh-hc-cC---CCHHHHHHHHHHcCCCchhCCCH
Confidence 999999999999999999975321110 000000 00 11 23456778889999999999999
Q ss_pred HHHHHH
Q 003199 801 NEVVQL 806 (840)
Q Consensus 801 ~evl~~ 806 (840)
.|++++
T Consensus 355 ~e~l~h 360 (377)
T 3byv_A 355 LQAMET 360 (377)
T ss_dssp HHHHTS
T ss_pred HHHhhC
Confidence 999874
No 224
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.8e-38 Score=342.75 Aligned_cols=260 Identities=23% Similarity=0.284 Sum_probs=192.3
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.+++.++||||+++++++..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 95 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ--------NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTP 95 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTS--------SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccC--------ChHHHHHHHHHHHHHHhcCCCCccceEEeecc
Confidence 35788899999999999999954 5789999999854321 12345678899999999999999999999976
Q ss_pred Cc------cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCee
Q 003199 604 LY------CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKV 677 (840)
Q Consensus 604 ~~------~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 677 (840)
.. ..++||||++ |+|.+.+.. .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||
T Consensus 96 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl 168 (371)
T 2xrw_A 96 QKSLEEFQDVYIVMELMD-ANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKI 168 (371)
T ss_dssp CCSTTTCCEEEEEEECCS-EEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEE
T ss_pred ccccccccceEEEEEcCC-CCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEE
Confidence 54 6799999996 578888864 58999999999999999999999 99999999999999999999999
Q ss_pred ecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh
Q 003199 678 ADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV 757 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 757 (840)
+|||+++.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ...+.....
T Consensus 169 ~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~ 240 (371)
T 2xrw_A 169 LDFGLARTAGT----SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH----IDQWNKVIE 240 (371)
T ss_dssp CCCCC--------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHC
T ss_pred EEeeccccccc----ccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHH
Confidence 99999986532 2223456799999999999998999999999999999999999999975321 111111100
Q ss_pred cccc--------------------------chhhhccccc-CCC---cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 758 DTKE--------------------------GIMEVLDKKL-SGS---FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 758 ~~~~--------------------------~~~~~~~~~~-~~~---~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.... .......... +.. .......+.+++.+|++.||++|||++|++++=
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp 320 (371)
T 2xrw_A 241 QLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHP 320 (371)
T ss_dssp -CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSH
T ss_pred HhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCc
Confidence 0000 0000000000 001 122356788999999999999999999999874
No 225
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=345.63 Aligned_cols=265 Identities=14% Similarity=0.138 Sum_probs=202.2
Q ss_pred HhcCccCeeeccCCcEEEEEEeCC---------CcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcce
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNS---------GEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVK 596 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 596 (840)
++|+..+.||+|+||.||+|.... ++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------------~~~~~E~~~l~~l~h~niv~ 106 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------------GRLFNEQNFFQRAAKPLQVN 106 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------------STHHHHHHHHHHHCCHHHHH
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------------chHHHHHHHHHHhcccchhh
Confidence 468888999999999999997653 789999998432 24678999999999999988
Q ss_pred ---------------eeeEEec-CccceEEEeecCCCChHHHhhcC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEe
Q 003199 597 ---------------LYCYFSS-LYCNLLVYEYMPNGNLWDALHKG-LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIH 659 (840)
Q Consensus 597 ---------------l~~~~~~-~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH 659 (840)
+++++.. ....++||||+ +++|.+++... ...+++.++..++.|++.||+|||+ ++|+|
T Consensus 107 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH 182 (352)
T 2jii_A 107 KWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHE---NEYVH 182 (352)
T ss_dssp HHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBC
T ss_pred hhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHh---CCccC
Confidence 5667665 67789999999 99999999875 3479999999999999999999999 99999
Q ss_pred cCCCCCCEEEcCCC--CCeeecccchhhhhccCCC----CcceecccccccccCccccccCCCCccccchhHHHHHHHHH
Q 003199 660 RDIKSTNILLDVNY--QPKVADFGIAKVLQARGGK----DSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELI 733 (840)
Q Consensus 660 ~Dlk~~Nill~~~~--~~kl~Dfg~a~~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~ 733 (840)
|||||+||+++.++ .+||+|||+++.+...... ........||+.|+|||++.+..++.++|||||||++|||+
T Consensus 183 ~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 262 (352)
T 2jii_A 183 GNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWL 262 (352)
T ss_dssp SCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence 99999999999998 8999999999876442211 11224457999999999999989999999999999999999
Q ss_pred hCCCCCCCCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCC
Q 003199 734 TGRKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPC 813 (840)
Q Consensus 734 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~ 813 (840)
+|+.||.................... .....+... ........+.+++.+||+.||++|||+.++++.|+++...
T Consensus 263 ~g~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 337 (352)
T 2jii_A 263 YGFLPWTNCLPNTEDIMKQKQKFVDK---PGPFVGPCG--HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD 337 (352)
T ss_dssp HSCCTTGGGTTCHHHHHHHHHHHHHS---CCCEECTTS--CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred hCCCCcccCCcCHHHHHHHHHhccCC---hhhhhhhcc--ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence 99999976432221111111100000 001111000 0011235677788899999999999999999999876544
Q ss_pred C
Q 003199 814 R 814 (840)
Q Consensus 814 ~ 814 (840)
.
T Consensus 338 ~ 338 (352)
T 2jii_A 338 L 338 (352)
T ss_dssp T
T ss_pred c
Confidence 3
No 226
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.2e-38 Score=336.55 Aligned_cols=263 Identities=24% Similarity=0.364 Sum_probs=197.6
Q ss_pred HHHHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeE
Q 003199 522 REILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCY 600 (840)
Q Consensus 522 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 600 (840)
..+.++|...+.||+|+||.||+|.. .+++.||||++........ ..........+.+|++++++++||||++++++
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 83 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIG--SAREADPALNVETEIEILKKLNHPCIIKIKNF 83 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC-----------------CHHHHHHHHHHCCCTTBCCEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhc--ccccchhhhhHHHHHHHHHhCCCCCCceEeeE
Confidence 45667899999999999999999965 4689999999854432110 01112234568899999999999999999999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC---Cee
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ---PKV 677 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~---~kl 677 (840)
+.... .++||||+++++|.+++.... .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++. +||
T Consensus 84 ~~~~~-~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl 158 (322)
T 2ycf_A 84 FDAED-YYIVLELMEGGELFDKVVGNK-RLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 158 (322)
T ss_dssp EESSS-EEEEEECCTTEETHHHHSTTC-CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEE
T ss_pred EcCCc-eEEEEecCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEE
Confidence 87655 799999999999999987654 78999999999999999999999 99999999999999987654 999
Q ss_pred ecccchhhhhccCCCCcceecccccccccCccccc---cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhh
Q 003199 678 ADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAY---SSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVS 754 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 754 (840)
+|||+++.... ........||+.|+|||++. ...++.++|||||||++|||++|+.||....... .......
T Consensus 159 ~Dfg~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~ 233 (322)
T 2ycf_A 159 TDFGHSKILGE----TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQIT 233 (322)
T ss_dssp CCCTTCEECCC----CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHH
T ss_pred ccCccceeccc----ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHH
Confidence 99999976522 22234467899999999873 4678999999999999999999999997532211 1111100
Q ss_pred hhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 755 IKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.... .............+.+++.+|++.||++||++.+++++
T Consensus 234 ---~~~~-------~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 234 ---SGKY-------NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp ---HTCC-------CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred ---hCcc-------ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 0000 00000001123567788889999999999999999864
No 227
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.8e-38 Score=345.14 Aligned_cols=268 Identities=23% Similarity=0.303 Sum_probs=201.2
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
.+|+..+.||+|+||.||+|.. .+|+.||||++....... .....+.+|+++++.++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 88 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKE--------GFPITALREIKILQLLKHENVVNLIEICRTK 88 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSS--------SSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccc--------cchHHHHHHHHHHHhccCCCcccHhheeecc
Confidence 5788999999999999999966 579999999985443221 1134567899999999999999999998763
Q ss_pred --------ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCe
Q 003199 605 --------YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPK 676 (840)
Q Consensus 605 --------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~k 676 (840)
...++||||++ |++.+.+......+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+|
T Consensus 89 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~k 164 (351)
T 3mi9_A 89 ASPYNRCKGSIYLVFDFCE-HDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLK 164 (351)
T ss_dssp --------CEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEE
T ss_pred ccccccCCceEEEEEeccC-CCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEE
Confidence 45789999997 58888887766679999999999999999999999 9999999999999999999999
Q ss_pred eecccchhhhhccCC-CCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhh
Q 003199 677 VADFGIAKVLQARGG-KDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVS 754 (840)
Q Consensus 677 l~Dfg~a~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 754 (840)
|+|||+++.+..... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ........
T Consensus 165 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~ 242 (351)
T 3mi9_A 165 LADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALIS 242 (351)
T ss_dssp ECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHH
T ss_pred EccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHH
Confidence 999999987643211 1223345678999999998876 4579999999999999999999999975321 11100000
Q ss_pred -hhhcc-ccchhhh--------c--ccccCCCcHHH------HHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 755 -IKVDT-KEGIMEV--------L--DKKLSGSFRDE------MIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 755 -~~~~~-~~~~~~~--------~--~~~~~~~~~~~------~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
..... ....... . .........+. ...+.+++.+|++.||++|||++|++++-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 313 (351)
T 3mi9_A 243 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313 (351)
T ss_dssp HHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCC
Confidence 00000 0000000 0 00001111111 24577899999999999999999999874
No 228
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.5e-38 Score=341.32 Aligned_cols=252 Identities=22% Similarity=0.356 Sum_probs=204.1
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
.+|...+.||+|+||.||+|... +++.||+|++...... .....+.+.+|+.+++.++||||+++++++.+.
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 113 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLL-------KPHQREKMSMEISIHRSLAHQHVVGFHGFFEDN 113 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCC-------SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhc-------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 56888899999999999999665 6889999998543211 123456788999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++||||+++++|.+++.... .+++.++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||+++
T Consensus 114 ~~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~ 189 (335)
T 2owb_A 114 DFVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLAT 189 (335)
T ss_dssp SEEEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred CeEEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCce
Confidence 99999999999999999987654 68999999999999999999999 999999999999999999999999999997
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
..... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ...+......
T Consensus 190 ~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~------ 256 (335)
T 2owb_A 190 KVEYD---GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL----KETYLRIKKN------ 256 (335)
T ss_dssp ECCST---TCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHHT------
T ss_pred ecccC---cccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH----HHHHHHHhcC------
Confidence 65321 2223456799999999999988999999999999999999999999975311 1111111000
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
...+...+ ...+.+++.+||+.||++|||+.|++++-
T Consensus 257 ---~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~ell~~~ 293 (335)
T 2owb_A 257 ---EYSIPKHI---NPVAASLIQKMLQTDPTARPTINELLNDE 293 (335)
T ss_dssp ---CCCCCTTS---CHHHHHHHHHHTCSSGGGSCCGGGGGGSH
T ss_pred ---CCCCCccC---CHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 01112222 23566788899999999999999999863
No 229
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.1e-38 Score=345.87 Aligned_cols=262 Identities=24% Similarity=0.374 Sum_probs=202.5
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||.||+|... +|+.||+|++.... .....+.+.+|+.+++.++||||+++++++.+.
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 103 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---------KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSD 103 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---------CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEET
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---------CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEEC
Confidence 46888899999999999999665 78999999985432 123456789999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCC-CeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLS-PIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
...++||||+++++|.+++.... .+++..+..++.+++.||+|||+ . +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 179 (360)
T 3eqc_A 104 GEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179 (360)
T ss_dssp TEEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred CEEEEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCC
Confidence 99999999999999999998764 68999999999999999999998 6 8999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhh-------
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIK------- 756 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~------- 756 (840)
+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ........
T Consensus 180 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~ 252 (360)
T 3eqc_A 180 GQLIDS-----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE--LELMFGCQVEGDAAE 252 (360)
T ss_dssp HHHHHH-----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHH--HHHHHC---------
T ss_pred cccccc-----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHhcccccccCCC
Confidence 776432 2234578999999999999999999999999999999999999997532100 00000000
Q ss_pred ------------------hccccchhh----hcccccCCCc-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 757 ------------------VDTKEGIME----VLDKKLSGSF-RDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 757 ------------------~~~~~~~~~----~~~~~~~~~~-~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
........+ .......... ......+.+++.+|++.||++|||+.|++++-
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 326 (360)
T 3eqc_A 253 TPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHA 326 (360)
T ss_dssp ---------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSH
T ss_pred CCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhCh
Confidence 000000000 0000000000 11234577888899999999999999999874
No 230
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.9e-38 Score=335.67 Aligned_cols=254 Identities=26% Similarity=0.336 Sum_probs=198.5
Q ss_pred HHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 523 EILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 523 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
...+.|+..+.||+|+||.||+|... +|+.||||++.... ..+.+.+|+.++++++||||+++++++
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------------~~~~~~~e~~~l~~l~h~~i~~~~~~~ 93 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------------DLQEIIKEISIMQQCDSPHVVKYYGSY 93 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS------------CCHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------------HHHHHHHHHHHHHhCCCCCCccEEEEE
Confidence 34567889999999999999999665 69999999985432 124578899999999999999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
......++||||+++++|.+++......+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg 170 (314)
T 3com_A 94 FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFG 170 (314)
T ss_dssp EETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCT
T ss_pred EeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecc
Confidence 99999999999999999999997555579999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
++..... .........||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ...........
T Consensus 171 ~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~-- 241 (314)
T 3com_A 171 VAGQLTD---TMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP----MRAIFMIPTNP-- 241 (314)
T ss_dssp TCEECBT---TBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHHHHHSC--
T ss_pred cchhhhh---hccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh----HHHHHHHhcCC--
Confidence 9976533 12223445789999999999998999999999999999999999999975311 10000000000
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.... .........+.+++.+|++.||.+|||+.+++++-
T Consensus 242 ------~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~ 280 (314)
T 3com_A 242 ------PPTF-RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHP 280 (314)
T ss_dssp ------CCCC-SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSH
T ss_pred ------Cccc-CCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCH
Confidence 0000 00111234577788899999999999999998753
No 231
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.5e-38 Score=348.26 Aligned_cols=255 Identities=11% Similarity=0.009 Sum_probs=181.5
Q ss_pred hcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc--CCCCcceee-----
Q 003199 527 AMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI--RHKNIVKLY----- 598 (840)
Q Consensus 527 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~----- 598 (840)
.|...+.||+|+||.||+|... +|+.||||++..... ......+.+.+|+.+++.+ +||||++++
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~ 135 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAE-------NSRSELERLHEATFAAARLLGESPEEARDRRRLLL 135 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCST-------THHHHHHHHHHHHHHHHHHHC----------CBCC
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccc-------ccccHHHHHHHHHHHHHHhcccChhhhhhceeEEe
Confidence 4777889999999999999754 799999999965431 1233456677885544444 699988755
Q ss_pred --eEEecC-----------------ccceEEEeecCCCChHHHhhcCCCCCChHHH------HHHHHHHHHHHHHHhhcC
Q 003199 599 --CYFSSL-----------------YCNLLVYEYMPNGNLWDALHKGLVHLDWPTR------HKIAFGVAQGLAYLHHGL 653 (840)
Q Consensus 599 --~~~~~~-----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~------~~i~~~i~~~l~~LH~~~ 653 (840)
+++... ...++||||++ |+|.+++......+.+..+ ..++.||+.||+|||+
T Consensus 136 p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~-- 212 (371)
T 3q60_A 136 PSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQS-- 212 (371)
T ss_dssp CCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred eehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHH--
Confidence 333322 33799999998 8999999875445667777 7888999999999999
Q ss_pred CCCeEecCCCCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCcccccc--CCCCccccchhHHHHHHH
Q 003199 654 LSPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS--SKATTKCDVYSFGVVLME 731 (840)
Q Consensus 654 ~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~e 731 (840)
++|+||||||+|||++.++.+||+|||+|+.... ......+|+.|+|||++.+ ..++.++|||||||++||
T Consensus 213 -~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~e 285 (371)
T 3q60_A 213 -KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT------RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYR 285 (371)
T ss_dssp -TTEEETTCSGGGEEECTTSCEEECCGGGEEETTC------EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHH
T ss_pred -CCCccCcCCHHHEEECCCCCEEEEecceeeecCC------CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHH
Confidence 9999999999999999999999999999986522 2224567799999999987 679999999999999999
Q ss_pred HHhCCCCCCCCCCCCcchhhhhhhhhccccchhhhccccc-CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 732 LITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKL-SGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 732 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
|++|+.||.......... |..... ........ .+........+.+++.+||+.||++|||+.|++++
T Consensus 286 lltg~~Pf~~~~~~~~~~--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 286 VWCLFLPFGLVTPGIKGS--WKRPSL------RVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp HHHSSCSTTBCCTTCTTC--CCBCCT------TSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTS
T ss_pred HHhCCCCCCCcCcccccc--hhhhhh------hhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 999999997643221110 100000 00000000 01111234567778889999999999999999864
No 232
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=5e-38 Score=338.75 Aligned_cols=257 Identities=19% Similarity=0.275 Sum_probs=197.1
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-CCCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-HKNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 603 (840)
++|+..+.||+|+||.||+|.. .+++.||||++.... .+.+.+|++++++++ ||||+++++++.+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------------~~~~~~E~~~l~~l~~~~~i~~~~~~~~~ 102 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-------------KKKIKREIKILENLRGGPNIITLADIVKD 102 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC-------------HHHHHHHHHHHHHHTTSTTBCCEEEEEEC
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc-------------hHHHHHHHHHHHHcCCCCCEEEeeeeecc
Confidence 5788899999999999999954 579999999984321 356889999999997 9999999999987
Q ss_pred --CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCC-CCeeecc
Q 003199 604 --LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNY-QPKVADF 680 (840)
Q Consensus 604 --~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~-~~kl~Df 680 (840)
....++||||+++++|.+++. .+++.++..++.|++.||+|||+ ++|+||||||+||+++.++ .+||+||
T Consensus 103 ~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Df 175 (330)
T 3nsz_A 103 PVSRTPALVFEHVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDW 175 (330)
T ss_dssp TTTCCEEEEEECCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred CCCCceEEEEeccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeC
Confidence 567799999999999999885 37899999999999999999999 9999999999999999776 8999999
Q ss_pred cchhhhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc-
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD- 758 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~- 758 (840)
|+++.... ........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...................
T Consensus 176 g~a~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~ 251 (330)
T 3nsz_A 176 GLAEFYHP----GQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 251 (330)
T ss_dssp TTCEECCT----TCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHH
T ss_pred CCceEcCC----CCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCc
Confidence 99976533 223345578999999999877 678999999999999999999999996432211111111000000
Q ss_pred ------------cccchhhhcccc--------cC-CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 759 ------------TKEGIMEVLDKK--------LS-GSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 759 ------------~~~~~~~~~~~~--------~~-~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
............ .. .........+.+++.+|++.||++|||++|++++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 252 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp HHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred hhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 000000000000 00 0011134567888889999999999999999986
No 233
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.3e-37 Score=349.09 Aligned_cols=260 Identities=20% Similarity=0.240 Sum_probs=202.1
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCC-CCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRH-KNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~ 603 (840)
++|...+.||+|+||.||+|.. .+++.||||++...... ..+.+|+++++.+.| +++..+..++..
T Consensus 7 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------------~~~~~E~~il~~L~~~~~i~~i~~~~~~ 74 (483)
T 3sv0_A 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------------PQLLYESKIYRILQGGTGIPNVRWFGVE 74 (483)
T ss_dssp TTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS------------CCHHHHHHHHHHTTTSTTCCCEEEEEEE
T ss_pred CcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc------------HHHHHHHHHHHHhcCCCCCCeEEEEEee
Confidence 5788899999999999999965 57999999987543311 236789999999987 556666666777
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE---cCCCCCeeecc
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL---DVNYQPKVADF 680 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill---~~~~~~kl~Df 680 (840)
....++||||+ +++|.+++......+++.+++.|+.||+.||+|||+ ++||||||||+|||+ +.++.+||+||
T Consensus 75 ~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 75 GDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred CCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeC
Confidence 88889999999 999999998765679999999999999999999999 999999999999999 68899999999
Q ss_pred cchhhhhccCCCC----cceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhh
Q 003199 681 GIAKVLQARGGKD----STTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIK 756 (840)
Q Consensus 681 g~a~~~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 756 (840)
|+++.+....... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........... +....
T Consensus 151 Gla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~-~~~i~ 229 (483)
T 3sv0_A 151 GLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK-YEKIS 229 (483)
T ss_dssp TTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHH-HHHHH
T ss_pred CcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHH-HHHHh
Confidence 9998765422211 122356799999999999999999999999999999999999999986432211111 11000
Q ss_pred hc-cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 757 VD-TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 757 ~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
.. ...... .+.. ....++.+++.+||+.||++||++.+|++.|+++
T Consensus 230 ~~~~~~~~~-----~l~~---~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 230 EKKVATSIE-----ALCR---GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHHHSCHH-----HHHT---TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred hccccccHH-----HHhc---CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 00 000000 0001 1234677888899999999999999999998765
No 234
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.2e-38 Score=335.72 Aligned_cols=253 Identities=22% Similarity=0.280 Sum_probs=197.0
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.+.|+..+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+++++.++||||+++++++..
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 87 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS----------EEELEDYIVEIEILATCDHPYIVKLLGAYYH 87 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------------CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC----------HHHHHHHHHHHHHHhcCCCCCEeeeeeeeee
Confidence 357888999999999999999765 68999999984332 1224678899999999999999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||||+++++|.+++......+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 88 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 88 DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVS 164 (302)
T ss_dssp C-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred CCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCC
Confidence 999999999999999999988755679999999999999999999999 99999999999999999999999999998
Q ss_pred hhhhccCCCCcceecccccccccCcccc-----ccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYA-----YSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
...... ........||+.|+|||++ .+..++.++||||||+++|||++|+.||..... .........
T Consensus 165 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~ 236 (302)
T 2j7t_A 165 AKNLKT---LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAK 236 (302)
T ss_dssp HHHHHH---HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHH
T ss_pred cccccc---ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-----HHHHHHHhc
Confidence 654321 1122345789999999988 356789999999999999999999999975311 000000000
Q ss_pred cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 759 TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
. . ... ..........+.+++.+|++.||++|||+.+++++
T Consensus 237 ~-~------~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 237 S-D------PPT-LLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp S-C------CCC-CSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTS
T ss_pred c-C------Ccc-cCCccccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0 0 000 00111223456778889999999999999999875
No 235
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.4e-37 Score=346.92 Aligned_cols=203 Identities=26% Similarity=0.346 Sum_probs=167.5
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+.+|+++++.++||||+++++++..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~--------~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~ 96 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF--------EDLIDCKRILREITILNRLKSDYIIRLYDLIIP 96 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTT--------TSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchh--------cChHHHHHHHHHHHHHHHcCCCCcceEEEEEec
Confidence 45788899999999999999955 578999999985322 123445778999999999999999999999876
Q ss_pred C-----ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeee
Q 003199 604 L-----YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVA 678 (840)
Q Consensus 604 ~-----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 678 (840)
. ...++||||++ |+|.+++.... .+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+
T Consensus 97 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~ 171 (432)
T 3n9x_A 97 DDLLKFDELYIVLEIAD-SDLKKLFKTPI-FLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVC 171 (432)
T ss_dssp SCTTTCCCEEEEEECCS-EEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEEC
T ss_pred CCCCcCCeEEEEEecCC-cCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEc
Confidence 5 56899999995 69999998754 69999999999999999999999 999999999999999999999999
Q ss_pred cccchhhhhccCCCC-------------------cceecccccccccCcccc-ccCCCCccccchhHHHHHHHHHhCCCC
Q 003199 679 DFGIAKVLQARGGKD-------------------STTTVIAGTYGYLAPEYA-YSSKATTKCDVYSFGVVLMELITGRKP 738 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~-------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~slG~il~el~tg~~p 738 (840)
|||+|+......... .......||+.|+|||++ ....++.++||||+||++|||++|..|
T Consensus 172 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p 251 (432)
T 3n9x_A 172 DFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251 (432)
T ss_dssp CCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred cCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccc
Confidence 999998764321110 123567899999999986 566799999999999999999986666
Q ss_pred CC
Q 003199 739 VE 740 (840)
Q Consensus 739 ~~ 740 (840)
|.
T Consensus 252 ~~ 253 (432)
T 3n9x_A 252 HI 253 (432)
T ss_dssp TC
T ss_pred cc
Confidence 54
No 236
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=6.1e-38 Score=342.63 Aligned_cols=278 Identities=21% Similarity=0.243 Sum_probs=200.1
Q ss_pred HHHHHHhcCccCeeeccCCcEEEEEEeCCCcEEEEEEeccccccccc-CchhhHHHHHHHHHHHHHHhccCCCCcceeee
Q 003199 521 QREILEAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSA-SDTDQLQLDKGLKTEVETLGNIRHKNIVKLYC 599 (840)
Q Consensus 521 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 599 (840)
...+.+.|...+.||+|+||.||+|...+|+.||||++......... .........+.+.+|++++++++||||+++++
T Consensus 17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 96 (362)
T 3pg1_A 17 LHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD 96 (362)
T ss_dssp HHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred HHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceee
Confidence 34556789999999999999999998888999999998654322111 01122344578999999999999999999999
Q ss_pred EEec-----CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC
Q 003199 600 YFSS-----LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ 674 (840)
Q Consensus 600 ~~~~-----~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 674 (840)
++.. ....++||||++ |+|.+.+......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 97 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~ 172 (362)
T 3pg1_A 97 IFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNND 172 (362)
T ss_dssp EEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCC
T ss_pred eEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCCC
Confidence 9843 335699999997 78999888776679999999999999999999999 99999999999999999999
Q ss_pred CeeecccchhhhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 003199 675 PKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWV 753 (840)
Q Consensus 675 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 753 (840)
+||+|||+++.... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .......
T Consensus 173 ~kl~Dfg~~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~ 247 (362)
T 3pg1_A 173 ITICDFNLAREDTA----DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFY-NQLNKIV 247 (362)
T ss_dssp EEECCTTC-------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHH
T ss_pred EEEEecCccccccc----ccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence 99999999975432 223345678999999998876 67899999999999999999999999753210 0000000
Q ss_pred hhhhcc---------ccchhhhccccc----CCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 754 SIKVDT---------KEGIMEVLDKKL----SGSF----RDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 754 ~~~~~~---------~~~~~~~~~~~~----~~~~----~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
...... ............ .... ......+.+++.+|++.||++|||+.|++++-
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 318 (362)
T 3pg1_A 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHP 318 (362)
T ss_dssp HHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred HHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCc
Confidence 000000 000000000000 0111 11235577889999999999999999999873
No 237
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7.7e-38 Score=332.26 Aligned_cols=265 Identities=25% Similarity=0.334 Sum_probs=199.3
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||.||+|... +|+.||||++...... ....+.+.+|++++++++||||+++++++...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 74 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET--------EGVPSTAIREISLLKELNHPNIVKLLDVIHTE 74 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccc--------hhhHHHHHHHHHHHHHcCCCCeeeEEEEEecC
Confidence 46788899999999999999665 7999999998543211 12235678899999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
...++||||++ ++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 75 ~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~ 150 (299)
T 2r3i_A 75 NKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLA 150 (299)
T ss_dssp TEEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHH
T ss_pred CceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhh
Confidence 99999999997 69999987653 468999999999999999999999 99999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCC-CCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc-
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSK-ATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE- 761 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~- 761 (840)
..... .........||+.|+|||.+.+.. ++.++||||||+++|||++|+.||...... ...............
T Consensus 151 ~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 226 (299)
T 2r3i_A 151 RAFGV---PVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEV 226 (299)
T ss_dssp HHHCC---CSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTT
T ss_pred hhccC---CccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCchh
Confidence 87643 122233456899999999987765 799999999999999999999999753211 000000000000000
Q ss_pred ---------chhhhcccccCCCcH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 762 ---------GIMEVLDKKLSGSFR----DEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 762 ---------~~~~~~~~~~~~~~~----~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.............+. ....++.+++.+|++.||++|||+.|++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 227 VWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp TSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000011111111 123567788889999999999999999985
No 238
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=9.5e-38 Score=331.40 Aligned_cols=262 Identities=26% Similarity=0.329 Sum_probs=205.9
Q ss_pred HHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-CCCcceeeeEE
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-HKNIVKLYCYF 601 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 601 (840)
..++|...+.||+|+||.||+|... +|+.||||++....... ..........+.+.+|+++++++. ||||+++++++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGS-FSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTT-CCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccc-cCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 3467888999999999999999664 78999999985543211 111223344677899999999995 99999999999
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
......++||||+++++|.+++.... .+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ccCCeEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEeccc
Confidence 99999999999999999999998754 68999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccc------cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhh
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAY------SSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSI 755 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 755 (840)
++..... ........||+.|+|||++. ...++.++||||||+++|||++|+.||.... .. .....
T Consensus 170 ~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~-~~~~~ 240 (298)
T 1phk_A 170 FSCQLDP----GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK----QM-LMLRM 240 (298)
T ss_dssp TCEECCT----TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS----HH-HHHHH
T ss_pred chhhcCC----CcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc----HH-HHHHH
Confidence 9976532 22234457899999999874 4568899999999999999999999996531 11 11100
Q ss_pred hhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 756 KVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
...... ....+........+.+++.+|++.||++|||+.|++++
T Consensus 241 ~~~~~~-------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 241 IMSGNY-------QFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp HHHTCC-------CCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred HhcCCc-------ccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhC
Confidence 000000 00011122334567788889999999999999999875
No 239
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.3e-38 Score=339.96 Aligned_cols=250 Identities=24% Similarity=0.327 Sum_probs=193.7
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHH-HhccCCCCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVET-LGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~ 603 (840)
++|...+.||+|+||.||+|.. .+|+.||||++...... .....+..|+.+ ++.++||||+++++++.+
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~ 121 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS---------QEQKRLLMDLDISMRTVDCPFTVTFYGALFR 121 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCC---------HHHHHHHHHHHHHHTTCCCTTTCCEEEEEEC
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCc---------HHHHHHHHHHHHHHhhcCCCcEEEEeeEEEe
Confidence 4577788999999999999965 57999999998543211 122344455555 788899999999999999
Q ss_pred CccceEEEeecCCCChHHHhhc---CCCCCChHHHHHHHHHHHHHHHHHhhcCCC-CeEecCCCCCCEEEcCCCCCeeec
Q 003199 604 LYCNLLVYEYMPNGNLWDALHK---GLVHLDWPTRHKIAFGVAQGLAYLHHGLLS-PIIHRDIKSTNILLDVNYQPKVAD 679 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlk~~Nill~~~~~~kl~D 679 (840)
....++||||+++ +|.+++.. ....+++..+..++.||+.||+|||+ + +|+||||||+||+++.++.+||+|
T Consensus 122 ~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~D 197 (340)
T 3an0_A 122 EGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCD 197 (340)
T ss_dssp SSCEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECC
T ss_pred CCcEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEee
Confidence 9999999999975 99888764 34579999999999999999999998 6 999999999999999999999999
Q ss_pred ccchhhhhccCCCCcceecccccccccCccccc----cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhh
Q 003199 680 FGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAY----SSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSI 755 (840)
Q Consensus 680 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 755 (840)
||+++.... ........||+.|+|||++. ...++.++|||||||++|||++|+.||..... .......
T Consensus 198 fg~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~---~~~~~~~- 269 (340)
T 3an0_A 198 FGISGYLVD----SVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT---PFQQLKQ- 269 (340)
T ss_dssp CSHHHHHSC----HHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC---HHHHHHH-
T ss_pred CCCceeccc----ccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc---hHHHHHH-
Confidence 999987632 22233457999999999964 34789999999999999999999999975211 1111110
Q ss_pred hhccccchhhhcccccCCC-cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 756 KVDTKEGIMEVLDKKLSGS-FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
......... .......+.+++.+||+.||++||++.|++++
T Consensus 270 ----------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 270 ----------VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp ----------HHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred ----------HhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 000000000 11123567788889999999999999999985
No 240
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.4e-38 Score=344.47 Aligned_cols=266 Identities=22% Similarity=0.300 Sum_probs=200.1
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
.+|+..+.||+|+||.||+|.. .+++.||||++.... .....+.+.+|++++++++||||+++++++...
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 97 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE---------HQTYCQRTLREIKILLRFRHENIIGINDIIRAP 97 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT---------CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCS
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc---------CcHHHHHHHHHHHHHHhcCCCCCccceeEEecC
Confidence 4688899999999999999965 478999999985321 123456788999999999999999999998654
Q ss_pred -----ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeec
Q 003199 605 -----YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVAD 679 (840)
Q Consensus 605 -----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 679 (840)
...++||||++ |+|.+++... .+++.++..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~~~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~D 171 (364)
T 3qyz_A 98 TIEQMKDVYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICD 171 (364)
T ss_dssp STTTCCCEEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECC
T ss_pred CccccceEEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEe
Confidence 36799999996 6999999775 58999999999999999999999 9999999999999999999999999
Q ss_pred ccchhhhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 680 FGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 680 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
||+++................||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+..... ...........
T Consensus 172 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~ 250 (364)
T 3qyz_A 172 FGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGS 250 (364)
T ss_dssp CTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCS
T ss_pred CcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCC
Confidence 9999876443222222345689999999998654 458999999999999999999999997642111 00000000000
Q ss_pred -cccchh--------hh---cccccCCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 759 -TKEGIM--------EV---LDKKLSGSF----RDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 759 -~~~~~~--------~~---~~~~~~~~~----~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
..+... .. ........+ ......+.+++.+|++.||++|||+.|++++=
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 315 (364)
T 3qyz_A 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315 (364)
T ss_dssp CCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSG
T ss_pred CCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCc
Confidence 000000 00 000000000 11235677889999999999999999999874
No 241
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.2e-37 Score=345.40 Aligned_cols=338 Identities=18% Similarity=0.170 Sum_probs=273.8
Q ss_pred cCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCCc
Q 003199 24 LSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNF 103 (840)
Q Consensus 24 Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 103 (840)
...+.+....+..++++++|++|+|++| .+..+| .+..+++|++|+|++|.+++. | ++.+++|++|+|++|.
T Consensus 25 ~~~~~~~~~~~~~~~~l~~L~~L~Ls~n---~l~~~~--~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~ 96 (457)
T 3bz5_A 25 AAAFEMQATDTISEEQLATLTSLDCHNS---SITDMT--GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNK 96 (457)
T ss_dssp HHHTTCCTTSEEEHHHHTTCCEEECCSS---CCCCCT--TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSC
T ss_pred HHhcCcCcccccChhHcCCCCEEEccCC---CcccCh--hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCC
Confidence 3344455566778899999999999999 566665 589999999999999999864 3 8899999999999999
Q ss_pred ccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccch
Q 003199 104 ITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISS 183 (840)
Q Consensus 104 i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 183 (840)
+++. | +..+++|++|++++|+ +. .+| +..+++|++|++++|++++. + +..+++|++|++++|+..+..
T Consensus 97 l~~~-~--~~~l~~L~~L~L~~N~-l~-~l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~-- 164 (457)
T 3bz5_A 97 LTNL-D--VTPLTKLTYLNCDTNK-LT-KLD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL-- 164 (457)
T ss_dssp CSCC-C--CTTCTTCCEEECCSSC-CS-CCC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--
T ss_pred Ccee-e--cCCCCcCCEEECCCCc-CC-eec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--
Confidence 9964 4 8899999999999997 33 344 88999999999999999964 3 888999999999999544343
Q ss_pred hhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCC
Q 003199 184 VIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNL 263 (840)
Q Consensus 184 ~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 263 (840)
.+..+++|++|++++|++++ +| +..+++|+.|++++|++++. .+..+++|++|++++|++.+ +| +..+++|
T Consensus 165 ~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L 235 (457)
T 3bz5_A 165 DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQL 235 (457)
T ss_dssp CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTC
T ss_pred ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCC
Confidence 47889999999999999996 34 78889999999999999865 37777888888888888877 34 7777888
Q ss_pred ceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCC
Q 003199 264 LRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDN 343 (840)
Q Consensus 264 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 343 (840)
+.|++++|++++.. +..+++|+.|++++| +|+.|++++|.+.+.+| +..+++|+.|+|++|
T Consensus 236 ~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n--------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n 296 (457)
T 3bz5_A 236 TYFDCSVNPLTELD---VSTLSKLTTLHCIQT--------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHN 296 (457)
T ss_dssp SEEECCSSCCSCCC---CTTCTTCCEEECTTC--------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTC
T ss_pred CEEEeeCCcCCCcC---HHHCCCCCEEeccCC--------------CCCEEECCCCccCCccc--ccccccCCEEECCCC
Confidence 88888888887543 445677777777765 46678899998877776 467899999999999
Q ss_pred ccCCCCCC--------cccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhccCCCeEEccCCC
Q 003199 344 LLSGPIPS--------GIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCELLPNSINFSNNR 415 (840)
Q Consensus 344 ~l~~~~p~--------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~l~l~~N~ 415 (840)
...+.+|. .+.++++|+.|+|++|+|++. + ++.+++|+.||+++|+|++ +| .+..|++++|+
T Consensus 297 ~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~-l~------~L~~L~l~~n~ 366 (457)
T 3bz5_A 297 TQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD-FS------SVGKIPALNNN 366 (457)
T ss_dssp TTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB-CT------TGGGSSGGGTS
T ss_pred cccceeccCCCcceEechhhcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC-cc------ccccccccCCc
Confidence 87766654 256678999999999999974 3 8999999999999999997 33 23456789999
Q ss_pred CcCc
Q 003199 416 LSGP 419 (840)
Q Consensus 416 l~~~ 419 (840)
++|.
T Consensus 367 l~g~ 370 (457)
T 3bz5_A 367 FEAE 370 (457)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9887
No 242
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.9e-38 Score=346.69 Aligned_cols=269 Identities=21% Similarity=0.308 Sum_probs=183.0
Q ss_pred HHHhcCc-cCeeeccCCcEEEEEEeC---CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeee
Q 003199 524 ILEAMTE-KNKVGQGGSGTVYKIDLN---SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYC 599 (840)
Q Consensus 524 ~~~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 599 (840)
+.+.|.. .++||+|+||+||+|... +++.||||++..... ...+.+|++++++++||||+++++
T Consensus 18 ~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~------------~~~~~~E~~~l~~l~hpniv~~~~ 85 (405)
T 3rgf_A 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI------------SMSACREIALLRELKHPNVISLQK 85 (405)
T ss_dssp HHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC------------CHHHHHHHHHHHHCCCTTBCCCCE
T ss_pred hhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC------------CHHHHHHHHHHHhcCCCCeeeEee
Confidence 4455665 568999999999999765 578999999853321 135778999999999999999999
Q ss_pred EEe--cCccceEEEeecCCCChHHHhhcC--------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE
Q 003199 600 YFS--SLYCNLLVYEYMPNGNLWDALHKG--------LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL 669 (840)
Q Consensus 600 ~~~--~~~~~~lV~e~~~~gsL~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 669 (840)
++. .....++||||++ |+|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+|||+
T Consensus 86 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll 161 (405)
T 3rgf_A 86 VFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILV 161 (405)
T ss_dssp EEEETTTTEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEE
T ss_pred EEecCCCCeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEE
Confidence 994 4677899999996 5888877532 1248999999999999999999999 999999999999999
Q ss_pred ----cCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCC
Q 003199 670 ----DVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSS-KATTKCDVYSFGVVLMELITGRKPVEDDFG 744 (840)
Q Consensus 670 ----~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~ 744 (840)
+.++.+||+|||+|+................||+.|+|||++.+. .++.++|||||||++|||++|+.||.....
T Consensus 162 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 241 (405)
T 3rgf_A 162 MGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQE 241 (405)
T ss_dssp CCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred ecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccc
Confidence 677899999999998765422222334556899999999998874 589999999999999999999999975432
Q ss_pred CCcc--------hhhhhhhh-hccccchh-------------hhcccccCC-CcHH--------HHHHHHHHHHHccCCC
Q 003199 745 DNKN--------IIYWVSIK-VDTKEGIM-------------EVLDKKLSG-SFRD--------EMIQVLRIAIRCTSKS 793 (840)
Q Consensus 745 ~~~~--------~~~~~~~~-~~~~~~~~-------------~~~~~~~~~-~~~~--------~~~~l~~l~~~cl~~d 793 (840)
.... +....... ......+. ......... .... ....+.+++.+|++.|
T Consensus 242 ~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~d 321 (405)
T 3rgf_A 242 DIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMD 321 (405)
T ss_dssp -----CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSS
T ss_pred cccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCC
Confidence 1100 00000000 00000000 000000000 0000 1345778999999999
Q ss_pred CCCCCCHHHHHHHhh
Q 003199 794 PATRPTMNEVVQLLA 808 (840)
Q Consensus 794 P~~Rps~~evl~~L~ 808 (840)
|++|||++|++++=.
T Consensus 322 P~~R~ta~e~L~hp~ 336 (405)
T 3rgf_A 322 PIKRITSEQAMQDPY 336 (405)
T ss_dssp GGGSCCHHHHHTSGG
T ss_pred cccCCCHHHHhcChh
Confidence 999999999999854
No 243
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.6e-38 Score=368.15 Aligned_cols=252 Identities=25% Similarity=0.286 Sum_probs=203.1
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEe
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFS 602 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 602 (840)
.++|...+.||+|+||+||+|... +++.||||++...... .....+.+..|..++..+ .||+|+++++++.
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~-------~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~ 412 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVI-------QDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ 412 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHH-------HTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccc-------cHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE
Confidence 467888999999999999999654 6899999998543211 112245677899999988 7999999999999
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccc
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGI 682 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~ 682 (840)
+.+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ ++||||||||+|||++.++.+||+|||+
T Consensus 413 ~~~~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGl 488 (674)
T 3pfq_A 413 TMDRLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGM 488 (674)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTT
T ss_pred eCCEEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecce
Confidence 9999999999999999999998764 69999999999999999999999 9999999999999999999999999999
Q ss_pred hhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccc
Q 003199 683 AKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEG 762 (840)
Q Consensus 683 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 762 (840)
|+.... .........||+.|+|||++.+..++.++|||||||++|||++|+.||.+... ..........
T Consensus 489 a~~~~~---~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----~~~~~~i~~~--- 557 (674)
T 3pfq_A 489 CKENIW---DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQSIMEH--- 557 (674)
T ss_dssp CEECCC---TTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHSS---
T ss_pred eecccc---CCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----HHHHHHHHhC---
Confidence 975422 22234567899999999999999999999999999999999999999975311 1111111110
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTM-----NEVVQL 806 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~-----~evl~~ 806 (840)
...++.. ...++.+++.+|++.||++||++ +||+++
T Consensus 558 -----~~~~p~~---~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 558 -----NVAYPKS---MSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp -----CCCCCTT---SCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred -----CCCCCcc---CCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 0111222 23456778889999999999997 788765
No 244
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.6e-38 Score=346.15 Aligned_cols=262 Identities=23% Similarity=0.285 Sum_probs=182.5
Q ss_pred HHhcCccCeeeccCCcEEEEEE-eCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKID-LNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|+..+.||+|+||.||+|. ..+|+.||||++..... .....+.+.+|+++++.++||||+++++++..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~ 99 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ--------SIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 99 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTS--------SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECS
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCcccc--------CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec
Confidence 3678889999999999999995 45799999999854321 12345678899999999999999999999865
Q ss_pred C------ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCee
Q 003199 604 L------YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKV 677 (840)
Q Consensus 604 ~------~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 677 (840)
. ...++|+||+ +++|.+++... .+++..+..++.||++||+|||+ .+|+||||||+||+++.++.+||
T Consensus 100 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL 173 (367)
T 2fst_X 100 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKI 173 (367)
T ss_dssp CSSGGGCCCCEEEEECC-CEECC-----C--CCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEE
T ss_pred CCccccCCeEEEEeccc-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEE
Confidence 4 5679999999 78999988763 68999999999999999999999 99999999999999999999999
Q ss_pred ecccchhhhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhh
Q 003199 678 ADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIK 756 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 756 (840)
+|||+++.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.... ..........
T Consensus 174 ~DFG~a~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~ 246 (367)
T 2fst_X 174 LDFGLARHTAD------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLV 246 (367)
T ss_dssp CC---------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHH
T ss_pred eeccccccccc------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh
Confidence 99999976532 2334678999999999877 67899999999999999999999999753210 0000000000
Q ss_pred hcc-ccc--------hhhh---cccccCCCcH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 757 VDT-KEG--------IMEV---LDKKLSGSFR----DEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 757 ~~~-~~~--------~~~~---~~~~~~~~~~----~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
... .+. .... +.......+. .....+.+++.+|++.||++|||+.|++++-
T Consensus 247 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp 313 (367)
T 2fst_X 247 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313 (367)
T ss_dssp CSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred CCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcCh
Confidence 000 000 0000 0000011111 1235577888999999999999999999874
No 245
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=7.1e-38 Score=331.86 Aligned_cols=250 Identities=24% Similarity=0.372 Sum_probs=194.4
Q ss_pred cCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCcc
Q 003199 528 MTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLYC 606 (840)
Q Consensus 528 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 606 (840)
|.....||+|+||.||+|.. .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++.+...
T Consensus 24 ~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 93 (295)
T 2clq_A 24 NGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD----------SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGF 93 (295)
T ss_dssp TSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC----------C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTE
T ss_pred CCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc----------hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCc
Confidence 44556899999999999965 578999999985432 1224668899999999999999999999999999
Q ss_pred ceEEEeecCCCChHHHhhcCC--CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC-CCCCeeecccch
Q 003199 607 NLLVYEYMPNGNLWDALHKGL--VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV-NYQPKVADFGIA 683 (840)
Q Consensus 607 ~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~-~~~~kl~Dfg~a 683 (840)
.++||||+++++|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++
T Consensus 94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~ 170 (295)
T 2clq_A 94 IKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTS 170 (295)
T ss_dssp EEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTC
T ss_pred EEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccc
Confidence 999999999999999998653 346788999999999999999999 99999999999999987 899999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccccCC--CCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhcccc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYSSK--ATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKE 761 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 761 (840)
+..... ........||+.|+|||.+.+.. ++.++||||||+++|||++|+.||..... .....+ ...
T Consensus 171 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~-~~~----- 239 (295)
T 2clq_A 171 KRLAGI---NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE--PQAAMF-KVG----- 239 (295)
T ss_dssp EESCC--------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS--HHHHHH-HHH-----
T ss_pred cccCCC---CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc--hhHHHH-hhc-----
Confidence 765321 22234457899999999987643 78999999999999999999999964211 100000 000
Q ss_pred chhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 762 GIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 762 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.......+... ....+.+++.+||+.||++||++.+++++
T Consensus 240 --~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 240 --MFKVHPEIPES---MSAEAKAFILKCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp --HHCCCCCCCTT---SCHHHHHHHHHTTCSSTTTSCCHHHHHTS
T ss_pred --ccccccccccc---CCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00011112222 23456678889999999999999999875
No 246
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=4.6e-38 Score=334.72 Aligned_cols=263 Identities=27% Similarity=0.383 Sum_probs=183.0
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|...+.||+|+||.||+|.. .+++.||||++..... ....+.+.+|+.++++++||||+++++++...
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 85 (303)
T 2vwi_A 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---------QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVK 85 (303)
T ss_dssp CCCEEEEECC---CCCEEEEEC----CEEEEECCC-------------------------CCCCCCCTTBCCEEEEEESS
T ss_pred hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---------chhHHHHHHHHHHHhhcCCCCEeeEEEEEeec
Confidence 4678889999999999999965 4789999998843321 12345688999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhc-------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCee
Q 003199 605 YCNLLVYEYMPNGNLWDALHK-------GLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKV 677 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 677 (840)
+..++||||+++++|.+++.. ....+++..+..++.|++.||+|||+ .+++||||||+||+++.++.+||
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl 162 (303)
T 2vwi_A 86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQI 162 (303)
T ss_dssp SCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEE
T ss_pred CCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEE
Confidence 999999999999999999874 22458999999999999999999999 99999999999999999999999
Q ss_pred ecccchhhhhccCC--CCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhh
Q 003199 678 ADFGIAKVLQARGG--KDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVS 754 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 754 (840)
+|||++......+. .........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...... .... ..
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~-~~ 239 (303)
T 2vwi_A 163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPM--KVLM-LT 239 (303)
T ss_dssp CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGG--GHHH-HH
T ss_pred EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchh--hHHH-HH
Confidence 99999987643211 1112344579999999998865 56899999999999999999999999753211 1100 00
Q ss_pred hhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 755 IKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.............+...... ....+.+++.+||+.||++|||+.|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 240 LQNDPPSLETGVQDKEMLKK---YGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp HTSSCCCTTC-----CCCCC---CCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hccCCCccccccccchhhhh---hhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 00000000000111111112 23456778889999999999999999975
No 247
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=330.32 Aligned_cols=257 Identities=24% Similarity=0.304 Sum_probs=196.5
Q ss_pred HHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE-
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF- 601 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~- 601 (840)
+..+|...+.||+|+||.||+|.. .+++.||||++...... ......+.+.+|++++++++||||+++++++
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 76 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLR------RIPNGEANVKKEIQLLRRLRHKNVIQLVDVLY 76 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHH------HSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccccc------ccchhHHHHHHHHHHHHhcCCCCeeEEEEEEE
Confidence 346789999999999999999966 47899999998543211 1123356789999999999999999999998
Q ss_pred -ecCccceEEEeecCCCChHHHhhcC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeec
Q 003199 602 -SSLYCNLLVYEYMPNGNLWDALHKG-LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVAD 679 (840)
Q Consensus 602 -~~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 679 (840)
.+....++||||++++ +.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|
T Consensus 77 ~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~d 152 (305)
T 2wtk_C 77 NEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISA 152 (305)
T ss_dssp CC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECC
T ss_pred cCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeec
Confidence 4456789999999876 76766543 3468999999999999999999999 9999999999999999999999999
Q ss_pred ccchhhhhccCCCCcceecccccccccCccccccCC--CCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh
Q 003199 680 FGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSK--ATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV 757 (840)
Q Consensus 680 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 757 (840)
||++...... ..........||+.|+|||++.+.. ++.++||||||+++|||++|+.||.... .........
T Consensus 153 fg~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i~ 226 (305)
T 2wtk_C 153 LGVAEALHPF-AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLFENIG 226 (305)
T ss_dssp CTTCEECCTT-CSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHH
T ss_pred cccccccCcc-ccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHh
Confidence 9999765432 1223334567999999999987644 3789999999999999999999997531 111111000
Q ss_pred ccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 758 DTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.. .......+ ...+.+++.+|++.||++|||+.|++++-
T Consensus 227 ~~--------~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~~~ 265 (305)
T 2wtk_C 227 KG--------SYAIPGDC---GPPLSDLLKGMLEYEPAKRFSIRQIRQHS 265 (305)
T ss_dssp HC--------CCCCCSSS---CHHHHHHHHHHTCSSTTTSCCHHHHHHSH
T ss_pred cC--------CCCCCCcc---CHHHHHHHHHHccCChhhCCCHHHHhcCc
Confidence 00 01112222 34566788899999999999999999874
No 248
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=6.4e-38 Score=365.80 Aligned_cols=255 Identities=22% Similarity=0.306 Sum_probs=200.4
Q ss_pred HhcCccCeeeccCCcEEEEEEeC----CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN----SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
++|...+.||+|+||.||+|... .+..||||++.... .....+.+.+|+.++++++||||+++++++
T Consensus 390 ~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~ 460 (656)
T 2j0j_A 390 ERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT---------SDSVREKFLQEALTMRQFDHPHIVKLIGVI 460 (656)
T ss_dssp GGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT---------CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC---------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 56888899999999999999764 24579999874322 123456789999999999999999999998
Q ss_pred ecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 602 SSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
.+ ...++||||+++|+|.+++......+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 461 ~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG 536 (656)
T 2j0j_A 461 TE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFG 536 (656)
T ss_dssp CS-SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred ec-CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecC
Confidence 54 56899999999999999998776679999999999999999999999 999999999999999999999999999
Q ss_pred chhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhhhccc
Q 003199 682 IAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIKVDTK 760 (840)
Q Consensus 682 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 760 (840)
+++..... .........+|+.|+|||.+.+..++.++||||||+++|||++ |..||.+... ....... ..
T Consensus 537 ~a~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--~~~~~~i---~~-- 607 (656)
T 2j0j_A 537 LSRYMEDS--TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRI---EN-- 607 (656)
T ss_dssp CCCSCCC------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHH---HH--
T ss_pred CCeecCCC--cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHH---Hc--
Confidence 99876431 1222334567789999999998899999999999999999997 9999975311 1111000 00
Q ss_pred cchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhc
Q 003199 761 EGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEA 810 (840)
Q Consensus 761 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~ 810 (840)
......+. .....+.+++.+||+.||++|||+.++++.|+++
T Consensus 608 -----~~~~~~~~---~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~i 649 (656)
T 2j0j_A 608 -----GERLPMPP---NCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649 (656)
T ss_dssp -----TCCCCCCT---TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----CCCCCCCc---cccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 00011112 2234667788899999999999999999999865
No 249
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.3e-37 Score=328.22 Aligned_cols=258 Identities=26% Similarity=0.321 Sum_probs=204.2
Q ss_pred hHHHHHHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceee
Q 003199 520 DQREILEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLY 598 (840)
Q Consensus 520 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 598 (840)
.+....++|+..+.||+|+||.||+|... +++.||||++...... ....+.+.+|++++++++||||++++
T Consensus 16 ~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~ 87 (287)
T 2wei_A 16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--------NKDTSTILREVELLKKLDHPNIMKLF 87 (287)
T ss_dssp HTHHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--------SSCHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred HHHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--------hHHHHHHHHHHHHHHhccCCCccEEE
Confidence 45677889999999999999999999665 7899999998543321 12246788999999999999999999
Q ss_pred eEEecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCC---CCC
Q 003199 599 CYFSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVN---YQP 675 (840)
Q Consensus 599 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~---~~~ 675 (840)
+++.+....++||||+++++|.+++.... .+++.++..++.|++.||+|||+ .+++||||||+||+++.+ +.+
T Consensus 88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~ 163 (287)
T 2wei_A 88 EILEDSSSFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDI 163 (287)
T ss_dssp EEEECSSEEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCE
T ss_pred EEEeCCCeEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccE
Confidence 99999999999999999999999887654 68999999999999999999999 999999999999999754 469
Q ss_pred eeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhh
Q 003199 676 KVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSI 755 (840)
Q Consensus 676 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 755 (840)
||+|||++..... ........||+.|+|||.+.+ .++.++||||||+++|+|++|+.||..... . .....
T Consensus 164 kL~Dfg~~~~~~~----~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~---~~~~~ 233 (287)
T 2wei_A 164 KIIDFGLSTCFQQ----NTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE--Y---DILKR 233 (287)
T ss_dssp EECSTTGGGTBCC----CSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--H---HHHHH
T ss_pred EEeccCcceeecC----CCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH--H---HHHHH
Confidence 9999999986532 222334568999999998765 589999999999999999999999975311 1 11100
Q ss_pred hhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 756 KVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 756 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
...... . ...+........+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~------~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 234 VETGKY------A-FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp HHHCCC------C-CCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred HHcCCC------C-CCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcC
Confidence 000000 0 0001111223467788889999999999999999985
No 250
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1e-37 Score=337.35 Aligned_cols=258 Identities=25% Similarity=0.286 Sum_probs=184.5
Q ss_pred hcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-CCCcceeeeEEe--
Q 003199 527 AMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-HKNIVKLYCYFS-- 602 (840)
Q Consensus 527 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~-- 602 (840)
+|+..+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+.++.++. ||||+++++++.
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~ 98 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE----------EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIG 98 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS----------HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEEC
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc----------hHHHHHHHHHHHHHHHhccCCChhhcccccccc
Confidence 678889999999999999975 478999999884332 233567889999999996 999999999983
Q ss_pred ------cCccceEEEeecCCCChHHHhhc--CCCCCChHHHHHHHHHHHHHHHHHhhcCCCC--eEecCCCCCCEEEcCC
Q 003199 603 ------SLYCNLLVYEYMPNGNLWDALHK--GLVHLDWPTRHKIAFGVAQGLAYLHHGLLSP--IIHRDIKSTNILLDVN 672 (840)
Q Consensus 603 ------~~~~~~lV~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~--ivH~Dlk~~Nill~~~ 672 (840)
.....++||||+. |+|.+++.. ....+++.+++.++.|++.||+|||+ .+ |+||||||+||+++.+
T Consensus 99 ~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~ 174 (337)
T 3ll6_A 99 KEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQ 174 (337)
T ss_dssp TTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTT
T ss_pred ccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCC
Confidence 3445789999995 799998865 23469999999999999999999999 78 9999999999999999
Q ss_pred CCCeeecccchhhhhccCCCC---------cceecccccccccCcccc---ccCCCCccccchhHHHHHHHHHhCCCCCC
Q 003199 673 YQPKVADFGIAKVLQARGGKD---------STTTVIAGTYGYLAPEYA---YSSKATTKCDVYSFGVVLMELITGRKPVE 740 (840)
Q Consensus 673 ~~~kl~Dfg~a~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~slG~il~el~tg~~p~~ 740 (840)
+.+||+|||+++......... .......||+.|+|||++ .+..++.++||||||+++|||++|+.||.
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~ 254 (337)
T 3ll6_A 175 GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFE 254 (337)
T ss_dssp SCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred CCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence 999999999998764321111 111245689999999988 56678999999999999999999999997
Q ss_pred CCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCCC
Q 003199 741 DDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRFE 816 (840)
Q Consensus 741 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 816 (840)
..... .. . ............ ...+.+++.+||+.||++|||+.|++++|+++...+..
T Consensus 255 ~~~~~--~~---~----------~~~~~~~~~~~~---~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~ 312 (337)
T 3ll6_A 255 DGAKL--RI---V----------NGKYSIPPHDTQ---YTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNV 312 (337)
T ss_dssp --------------------------CCCCTTCCS---SGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTC
T ss_pred chhHH--Hh---h----------cCcccCCccccc---chHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccCC
Confidence 53110 00 0 000000001111 12356688899999999999999999999877654443
No 251
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.3e-37 Score=346.53 Aligned_cols=197 Identities=25% Similarity=0.337 Sum_probs=169.3
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc------CCCCccee
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI------RHKNIVKL 597 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l 597 (840)
..+|+..+.||+|+||.||+|.. .+++.||||++... ......+.+|+++++.+ .|+||+++
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----------~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~ 164 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----------KRFHRQAAEEIRILEHLRKQDKDNTMNVIHM 164 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----------HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----------cchHHHHHHHHHHHHHHhhccccCCcCEEEE
Confidence 45688899999999999999954 56899999998432 12345566777777776 57799999
Q ss_pred eeEEecCccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC--
Q 003199 598 YCYFSSLYCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ-- 674 (840)
Q Consensus 598 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~-- 674 (840)
++++......++||||+. ++|.+++.... ..+++..+..++.||+.||+|||+ .+||||||||+|||++.++.
T Consensus 165 ~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~ 240 (429)
T 3kvw_A 165 LENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSG 240 (429)
T ss_dssp EEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCC
T ss_pred EeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcc
Confidence 999999999999999995 69999887754 358999999999999999999999 89999999999999999887
Q ss_pred CeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCC
Q 003199 675 PKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDD 742 (840)
Q Consensus 675 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 742 (840)
+||+|||+|+.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 241 vkL~DFG~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 241 IKVIDFGSSCYEHQ------RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp EEECCCTTCEETTC------CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eEEeecccceecCC------cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 99999999965422 233457899999999999999999999999999999999999999764
No 252
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1e-37 Score=335.71 Aligned_cols=271 Identities=23% Similarity=0.336 Sum_probs=199.9
Q ss_pred HhcCccCeeeccCCcEEEEEEe--CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc---CCCCcceeeeE
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL--NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI---RHKNIVKLYCY 600 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~ 600 (840)
++|+..+.||+|+||.||+|.. .+|+.||||++........ ....+.+|+.+++.+ .||||++++++
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~--------~~~~~~~e~~~l~~l~~~~h~~i~~~~~~ 82 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG--------MPLSTIREVAVLRHLETFEHPNVVRLFDV 82 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS--------CBCTHHHHHHHHHHHHHTCCTTBCCEEEE
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc--------CCchhhHHHHHHHhhhccCCCCeEeeeee
Confidence 5788899999999999999976 4688999999864432110 012344667666665 89999999999
Q ss_pred Ee-----cCccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC
Q 003199 601 FS-----SLYCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ 674 (840)
Q Consensus 601 ~~-----~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 674 (840)
+. .....++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~ 158 (326)
T 1blx_A 83 CTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQ 158 (326)
T ss_dssp EEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCC
T ss_pred eeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCC
Confidence 87 5667899999997 69999998653 358999999999999999999999 99999999999999999999
Q ss_pred CeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhh
Q 003199 675 PKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVS 754 (840)
Q Consensus 675 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 754 (840)
+||+|||+++.... ........||+.|+|||++.+..++.++||||||+++|||++|+.||..... ........
T Consensus 159 ~kl~Dfg~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~ 232 (326)
T 1blx_A 159 IKLADFGLARIYSF----QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQLGKIL 232 (326)
T ss_dssp EEECSCCSCCCCCG----GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHH
T ss_pred EEEecCcccccccC----CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHH
Confidence 99999999976532 2233456789999999999998999999999999999999999999975321 11000000
Q ss_pred hhh--ccccchh-------hhcc----cccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--hhhcCCCC
Q 003199 755 IKV--DTKEGIM-------EVLD----KKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL--LAEADPCR 814 (840)
Q Consensus 755 ~~~--~~~~~~~-------~~~~----~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~--L~~~~~~~ 814 (840)
... ....... .... .............+.+++.+|++.||++|||+.|++++ +.++..+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~ 307 (326)
T 1blx_A 233 DVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCK 307 (326)
T ss_dssp HHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCCCC
T ss_pred HHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccchhh
Confidence 000 0000000 0000 00000111233456778889999999999999999976 45555443
No 253
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2e-36 Score=338.60 Aligned_cols=364 Identities=24% Similarity=0.329 Sum_probs=266.2
Q ss_pred ccccccccCCC-CCCCCCC-------------CEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCccccccc
Q 003199 2 SFMYLTGTLPD-FSPMQNL-------------RRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRL 67 (840)
Q Consensus 2 ~~~~~~~~~~~-~~~l~~L-------------~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l 67 (840)
+.|.++|.+|. ++.+++| ++|++++|.++ .+|.. .++|++|++++| .+..+|. .+
T Consensus 42 ~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~-~lp~~---~~~L~~L~l~~n---~l~~lp~----~~ 110 (454)
T 1jl5_A 42 AWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLS-SLPEL---PPHLESLVASCN---SLTELPE----LP 110 (454)
T ss_dssp HHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCS-CCCSC---CTTCSEEECCSS---CCSSCCC----CC
T ss_pred cCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccc-cCCCC---cCCCCEEEccCC---cCCcccc----cc
Confidence 45677888887 8888764 99999999999 45552 479999999999 5556664 24
Q ss_pred ccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeee
Q 003199 68 TKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLD 147 (840)
Q Consensus 68 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~ 147 (840)
++|+.|++++|.+++. |.. .++|++|+|++|++++ +| .|..+++|++|++++|+ +. .+|..+ .+|++|+
T Consensus 111 ~~L~~L~l~~n~l~~l-~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~-l~-~lp~~~---~~L~~L~ 179 (454)
T 1jl5_A 111 QSLKSLLVDNNNLKAL-SDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNS-LK-KLPDLP---PSLEFIA 179 (454)
T ss_dssp TTCCEEECCSSCCSCC-CSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSC-CS-CCCCCC---TTCCEEE
T ss_pred CCCcEEECCCCccCcc-cCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCc-Cc-ccCCCc---ccccEEE
Confidence 8999999999999853 321 2699999999999995 77 69999999999999998 33 466543 5899999
Q ss_pred ccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccc
Q 003199 148 MSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSG 227 (840)
Q Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 227 (840)
+++|++++ +| .+..+++|++|++++|++++. |.. .++|++|++++|+++ .+| .+..+++|++|++++|++++
T Consensus 180 L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~ 251 (454)
T 1jl5_A 180 AGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL-PDL---PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT 251 (454)
T ss_dssp CCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CCC---CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS
T ss_pred CcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-CCC---cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc
Confidence 99999996 56 699999999999999999864 332 369999999999999 566 48999999999999999986
Q ss_pred cCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCC
Q 003199 228 PLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGN 307 (840)
Q Consensus 228 ~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 307 (840)
+|.. ..+|+.|++++|.+.+ +|.. +++|++|++++|++++ +|.. .++|+.|++++|++++.. .
T Consensus 252 -l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~i~-----~ 314 (454)
T 1jl5_A 252 -LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRSLC-----D 314 (454)
T ss_dssp -CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSEEC-----C
T ss_pred -cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCccc-----C
Confidence 3432 4789999999999987 4443 3799999999999985 3321 268999999999998632 2
Q ss_pred C-CCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCC--Ccchhcccc----
Q 003199 308 A-RNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNS--SIPNSLSSL---- 380 (840)
Q Consensus 308 l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l---- 380 (840)
+ ++|+.|++++|++++ +|.. +++|+.|++++|+++ .+|. .+++|+.|+|++|++++ .+|.++..+
T Consensus 315 ~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~ 386 (454)
T 1jl5_A 315 LPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNS 386 (454)
T ss_dssp CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC
T ss_pred CcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcc
Confidence 3 589999999999996 5554 579999999999999 4666 47899999999999998 788898888
Q ss_pred ---------cCCCEEECcCccccc--cCCchhhccCCCeEEccCCCCcCcCCcccc
Q 003199 381 ---------KSLNVLDLSNNLLTG--YIPESLCELLPNSINFSNNRLSGPIPLSLI 425 (840)
Q Consensus 381 ---------~~L~~L~l~~N~l~~--~~p~~~~~~~~~~l~l~~N~l~~~~p~~~~ 425 (840)
++|+.||+++|++++ .+|.++ ..|.+.+|.+.+++|....
T Consensus 387 ~~~~i~~~~~~L~~L~ls~N~l~~~~~iP~sl-----~~L~~~~~~~~~~~~~~~~ 437 (454)
T 1jl5_A 387 HLAEVPELPQNLKQLHVETNPLREFPDIPESV-----EDLRMNSERVVDPYEFAHE 437 (454)
T ss_dssp --------------------------------------------------------
T ss_pred cccccccccCcCCEEECCCCcCCccccchhhH-----hheeCcCcccCCccccCHH
Confidence 899999999999998 788765 4567788888888775433
No 254
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4e-38 Score=346.90 Aligned_cols=259 Identities=27% Similarity=0.377 Sum_probs=190.5
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
.+|+..+.||+|+||+||+|....+..||+|++...... ..+|+++++.++||||+++++++....
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~--------------~~~E~~il~~l~h~niv~l~~~~~~~~ 105 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF--------------KNRELQIMRIVKHPNVVDLKAFFYSNG 105 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS--------------CCHHHHHHHTCCCTTBCCEEEEEEEES
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch--------------HHHHHHHHHhCCCCCcceEEEEEEecC
Confidence 357888999999999999998877777999988543211 126999999999999999999985433
Q ss_pred ------cceEEEeecCCCChHHHhh--cCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEc-CCCCCe
Q 003199 606 ------CNLLVYEYMPNGNLWDALH--KGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLD-VNYQPK 676 (840)
Q Consensus 606 ------~~~lV~e~~~~gsL~~~l~--~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~k 676 (840)
..++||||++++.+..... .....+++..+..++.|++.||+|||+ ++|+||||||+||+++ .++.+|
T Consensus 106 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~k 182 (394)
T 4e7w_A 106 DKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLK 182 (394)
T ss_dssp SSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEE
T ss_pred CCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEE
Confidence 3689999997654433322 223478999999999999999999999 9999999999999999 789999
Q ss_pred eecccchhhhhccCCCCcceecccccccccCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhh
Q 003199 677 VADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSS-KATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSI 755 (840)
Q Consensus 677 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~ 755 (840)
|+|||+|+.... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.... .......+.
T Consensus 183 L~DFG~a~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~ 257 (394)
T 4e7w_A 183 LIDFGSAKILIA----GEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKV 257 (394)
T ss_dssp ECCCTTCEECCT----TCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHH
T ss_pred EeeCCCcccccC----CCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHH
Confidence 999999987632 2223456789999999998765 5899999999999999999999999764211 111111110
Q ss_pred hh-ccccchhh----hcccc---cC-CCcH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 756 KV-DTKEGIME----VLDKK---LS-GSFR-----DEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 756 ~~-~~~~~~~~----~~~~~---~~-~~~~-----~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.. ...+.+.. ..... .. ..+. ....++.+++.+|++.||++|||+.|+++|
T Consensus 258 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 258 LGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 00 00000000 00000 00 1111 123567888999999999999999999987
No 255
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.9e-37 Score=343.45 Aligned_cols=260 Identities=27% Similarity=0.261 Sum_probs=198.5
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC--------CCCcce
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR--------HKNIVK 596 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~ 596 (840)
.+|...+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+++++.++ |+||++
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~ 105 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-----------EHYTETALDEIRLLKSVRNSDPNDPNREMVVQ 105 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----------HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCC
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-----------CcchHHHHHHHHHHHHHhhcCCCCCCcceeee
Confidence 5788999999999999999954 57899999998422 233567889999999986 788999
Q ss_pred eeeEEe----cCccceEEEeecCCCChHHHhhcC-CCCCChHHHHHHHHHHHHHHHHHhhcCCC-CeEecCCCCCCEEEc
Q 003199 597 LYCYFS----SLYCNLLVYEYMPNGNLWDALHKG-LVHLDWPTRHKIAFGVAQGLAYLHHGLLS-PIIHRDIKSTNILLD 670 (840)
Q Consensus 597 l~~~~~----~~~~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlk~~Nill~ 670 (840)
+++++. .....++||||+ ++++.+.+... ...+++..+..++.||+.||+|||+ + +||||||||+|||++
T Consensus 106 ~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~ 181 (397)
T 1wak_A 106 LLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLS 181 (397)
T ss_dssp EEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEEC
T ss_pred eecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEe
Confidence 999987 566789999999 66666666544 3569999999999999999999999 8 999999999999999
Q ss_pred CCC-------------------------------------------------CCeeecccchhhhhccCCCCcceecccc
Q 003199 671 VNY-------------------------------------------------QPKVADFGIAKVLQARGGKDSTTTVIAG 701 (840)
Q Consensus 671 ~~~-------------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~g 701 (840)
.++ .+||+|||+++.... ......|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~------~~~~~~g 255 (397)
T 1wak_A 182 VNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK------HFTEDIQ 255 (397)
T ss_dssp CCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB------CSCSCCS
T ss_pred ccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc------cCccCCC
Confidence 775 799999999976533 2334578
Q ss_pred cccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcc-hhhhhhhhhc--cc--c-------chhhhccc
Q 003199 702 TYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKN-IIYWVSIKVD--TK--E-------GIMEVLDK 769 (840)
Q Consensus 702 t~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~--~~--~-------~~~~~~~~ 769 (840)
|+.|+|||++.+..++.++|||||||++|||++|+.||......... .......... .. . ........
T Consensus 256 t~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 335 (397)
T 1wak_A 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTK 335 (397)
T ss_dssp CGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCT
T ss_pred CCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCC
Confidence 99999999999999999999999999999999999999764332211 0000000000 00 0 00000000
Q ss_pred --------------------ccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 770 --------------------KLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 770 --------------------~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.......+....+.+++.+||+.||++|||++|++++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 336 KGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp TSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred ccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0001124556778899999999999999999999976
No 256
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.8e-38 Score=345.71 Aligned_cols=259 Identities=24% Similarity=0.322 Sum_probs=191.2
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
..+|...+.||+|+||+||+|.. .+|+.||||++...... ..+|+++++.++||||+++++++..
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~--------------~~~E~~il~~l~hpnIv~l~~~~~~ 71 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY--------------KNRELDIMKVLDHVNIIKLVDYFYT 71 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS--------------CCHHHHHHTTCCCTTBCCEEEEEEE
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch--------------HHHHHHHHHHcCCCCccchhheeee
Confidence 35788899999999999999954 68999999998543211 2369999999999999999999843
Q ss_pred --------------------------------------CccceEEEeecCCCChHHHhhc---CCCCCChHHHHHHHHHH
Q 003199 604 --------------------------------------LYCNLLVYEYMPNGNLWDALHK---GLVHLDWPTRHKIAFGV 642 (840)
Q Consensus 604 --------------------------------------~~~~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i 642 (840)
....++||||++ |+|.+.+.. ....+++..+..++.|+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi 150 (383)
T 3eb0_A 72 TGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQL 150 (383)
T ss_dssp C-------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHH
T ss_pred cCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHH
Confidence 234789999997 587776653 23479999999999999
Q ss_pred HHHHHHHhhcCCCCeEecCCCCCCEEEc-CCCCCeeecccchhhhhccCCCCcceecccccccccCccccccC-CCCccc
Q 003199 643 AQGLAYLHHGLLSPIIHRDIKSTNILLD-VNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSS-KATTKC 720 (840)
Q Consensus 643 ~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~ 720 (840)
+.||+|||+ .+|+||||||+||+++ .++.+||+|||+|+.... ........||+.|+|||.+.+. .++.++
T Consensus 151 ~~aL~~LH~---~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~ 223 (383)
T 3eb0_A 151 FRAVGFIHS---LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIP----SEPSVAYICSRFYRAPELMLGATEYTPSI 223 (383)
T ss_dssp HHHHHHHHT---TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCT----TSCCCCCCCCSSCCCHHHHTTCSSCCTHH
T ss_pred HHHHHHHHH---CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCC----CCCCcCcccCCCccCHHHhcCCCCCCcch
Confidence 999999999 9999999999999998 688999999999986533 2233455789999999988765 489999
Q ss_pred cchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh-ccccchh-------hhccccc-CCCcH-----HHHHHHHHHH
Q 003199 721 DVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV-DTKEGIM-------EVLDKKL-SGSFR-----DEMIQVLRIA 786 (840)
Q Consensus 721 Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~~~-~~~~~-----~~~~~l~~l~ 786 (840)
||||+||++|||++|+.||.+.... ........... ...+.+. ...-+.. ...+. .....+.+++
T Consensus 224 DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 302 (383)
T 3eb0_A 224 DLWSIGCVFGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLL 302 (383)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHH
T ss_pred hhhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHH
Confidence 9999999999999999999763211 11111110000 0000000 0000000 01111 1234577888
Q ss_pred HHccCCCCCCCCCHHHHHHH
Q 003199 787 IRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 787 ~~cl~~dP~~Rps~~evl~~ 806 (840)
.+|++.||++|||+.|++++
T Consensus 303 ~~~L~~dP~~R~t~~e~l~h 322 (383)
T 3eb0_A 303 EQILRYEPDLRINPYEAMAH 322 (383)
T ss_dssp HHHCCSSGGGSCCHHHHHTS
T ss_pred HHHccCChhhCCCHHHHhcC
Confidence 89999999999999999976
No 257
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.3e-37 Score=337.28 Aligned_cols=261 Identities=22% Similarity=0.291 Sum_probs=196.2
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.+++.++||||+++++++..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 112 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--------SEIFAKRAYRELLLLKHMQHENVIGLLDVFTP 112 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTS--------SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECS
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEeccccc--------chhHHHHHHHHHHHHHhcCCCCchhhhhheec
Confidence 45788889999999999999954 5799999999854321 13345778899999999999999999999987
Q ss_pred Cccc------eEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCee
Q 003199 604 LYCN------LLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKV 677 (840)
Q Consensus 604 ~~~~------~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl 677 (840)
.... ++||||++ ++|.+.+.. .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 113 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL 185 (371)
T 4exu_A 113 ASSLRNFYDFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKI 185 (371)
T ss_dssp CSSSTTCCCCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEE
T ss_pred cCCcccceeEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEE
Confidence 6655 99999996 688888754 58999999999999999999999 99999999999999999999999
Q ss_pred ecccchhhhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhh
Q 003199 678 ADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIK 756 (840)
Q Consensus 678 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 756 (840)
+|||+++.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..........
T Consensus 186 ~Dfg~a~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~ 258 (371)
T 4exu_A 186 LDFGLARHADA------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVT 258 (371)
T ss_dssp CSTTCC--------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHH
T ss_pred EecCccccccc------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHh
Confidence 99999976532 2334578999999999877 67899999999999999999999999753210 0000000000
Q ss_pred hccccc------------hhhhcccccCCCcH----HHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 757 VDTKEG------------IMEVLDKKLSGSFR----DEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 757 ~~~~~~------------~~~~~~~~~~~~~~----~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
...... ............+. .....+.+++.+|++.||++|||+.|++++=
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 325 (371)
T 4exu_A 259 GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 325 (371)
T ss_dssp CCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred CCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCc
Confidence 000000 00000011111111 2245678889999999999999999999874
No 258
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=338.40 Aligned_cols=262 Identities=23% Similarity=0.334 Sum_probs=196.9
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCc
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLY 605 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 605 (840)
++|+..+.||+|+||.||+|...+ .||||++....... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 33 ~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~--------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 33 EQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNE--------DQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp SCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCC--------CCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred HHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCH--------HHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 467788999999999999998763 49999986543211 11234667999999999999999999999999
Q ss_pred cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhh
Q 003199 606 CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKV 685 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 685 (840)
..++||||+++++|.+++......+++..+..++.|++.||+|||+ ++|+||||||+||+++ ++.+||+|||+++.
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~ 178 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSI 178 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC-
T ss_pred ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCccc
Confidence 9999999999999999998876679999999999999999999999 9999999999999998 67999999999876
Q ss_pred hhccC--CCCcceecccccccccCcccccc---------CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhh
Q 003199 686 LQARG--GKDSTTTVIAGTYGYLAPEYAYS---------SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVS 754 (840)
Q Consensus 686 ~~~~~--~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 754 (840)
..... ..........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.... .....+.
T Consensus 179 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~---~~~~~~~- 254 (319)
T 2y4i_B 179 SGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP---AEAIIWQ- 254 (319)
T ss_dssp ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC---HHHHHHH-
T ss_pred cccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC---HHHHHHH-
Confidence 53211 11223344568999999998864 457899999999999999999999997531 1111110
Q ss_pred hhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCC
Q 003199 755 IKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRF 815 (840)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 815 (840)
.. ......... ......+.+++.+||+.||++|||+.++++.|+++.....
T Consensus 255 --~~------~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~ 305 (319)
T 2y4i_B 255 --MG------TGMKPNLSQ--IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305 (319)
T ss_dssp --HH------TTCCCCCCC--SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred --hc------cCCCCCCCc--CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence 00 000011100 0122346678889999999999999999999998876543
No 259
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=7.5e-38 Score=347.63 Aligned_cols=258 Identities=28% Similarity=0.400 Sum_probs=189.4
Q ss_pred hcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC-
Q 003199 527 AMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL- 604 (840)
Q Consensus 527 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~- 604 (840)
.|+..+.||+|+||.||+|... +|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~--------------~~~~E~~il~~l~hpniv~l~~~~~~~~ 120 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR--------------FKNRELQIMRKLDHCNIVRLRYFFYSSG 120 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT--------------SCCHHHHHHHTCCCTTBCCEEEEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch--------------hHHHHHHHHHHcCCCCccceeeEEeccC
Confidence 5778889999999999999765 699999999854321 123699999999999999999988432
Q ss_pred -----ccceEEEeecCCCChHHHhh---cCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCC-CCC
Q 003199 605 -----YCNLLVYEYMPNGNLWDALH---KGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVN-YQP 675 (840)
Q Consensus 605 -----~~~~lV~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-~~~ 675 (840)
...++||||+++ ++.+.+. .....+++..+..++.||++||+|||+ ++|+||||||+|||++.+ +.+
T Consensus 121 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~ 196 (420)
T 1j1b_A 121 EKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVL 196 (420)
T ss_dssp TTTTEEEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEE
T ss_pred CCCcceeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeE
Confidence 235789999975 6666554 234579999999999999999999999 999999999999999965 568
Q ss_pred eeecccchhhhhccCCCCcceecccccccccCccccccC-CCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhh
Q 003199 676 KVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSS-KATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVS 754 (840)
Q Consensus 676 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 754 (840)
||+|||+++.+.. ........||+.|+|||++.+. .++.++|||||||++|||++|+.||.+... ...+.....
T Consensus 197 kl~DFG~a~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~ 271 (420)
T 1j1b_A 197 KLCDFGSAKQLVR----GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIK 271 (420)
T ss_dssp EECCCTTCEECCT----TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHH
T ss_pred Eeccchhhhhccc----CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHH
Confidence 9999999986532 1223345789999999998765 789999999999999999999999976321 111111111
Q ss_pred hhh-ccccchhh-------hcccccCC-CcH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 755 IKV-DTKEGIME-------VLDKKLSG-SFR-----DEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 755 ~~~-~~~~~~~~-------~~~~~~~~-~~~-----~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
... ...+.+.. ..-+.+.. .+. ....++.+++.+|++.||++||++.|+++|-
T Consensus 272 ~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp 338 (420)
T 1j1b_A 272 VLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338 (420)
T ss_dssp HHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCH
Confidence 000 00000000 00000100 011 1235678888999999999999999999873
No 260
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.4e-38 Score=336.38 Aligned_cols=264 Identities=22% Similarity=0.340 Sum_probs=190.1
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe--
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS-- 602 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-- 602 (840)
.+|...+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 80 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD----------PQSVKHALREIKIIRRLDHDNIVKVFEILGPS 80 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS----------HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTT
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC----------hHHHHHHHHHHHHHHhcCCCCeeEEEEecccc
Confidence 56888899999999999999665 58999999884322 234567889999999999999999998874
Q ss_pred ------------cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEc
Q 003199 603 ------------SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLD 670 (840)
Q Consensus 603 ------------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~ 670 (840)
+....++||||++ |+|.+++... .+++..+..++.|++.||+|||+ ++|+||||||+||+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~ 154 (320)
T 2i6l_A 81 GSQLTDDVGSLTELNSVYIVQEYME-TDLANVLEQG--PLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFIN 154 (320)
T ss_dssp SCBCCC----CCSCSEEEEEEECCS-EEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEE
T ss_pred ccccccccccccccCceeEEeeccC-CCHHHHhhcC--CccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEc
Confidence 3456789999997 6999999764 58999999999999999999999 9999999999999997
Q ss_pred -CCCCCeeecccchhhhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcc
Q 003199 671 -VNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKN 748 (840)
Q Consensus 671 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~ 748 (840)
+++.+||+|||+++................+|+.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ..
T Consensus 155 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~ 233 (320)
T 2i6l_A 155 TEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHEL-EQ 233 (320)
T ss_dssp TTTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HH
T ss_pred CCCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHH-HH
Confidence 5678999999999876432222223345567999999998765 67899999999999999999999999753210 00
Q ss_pred hhhhhhhh-hccccchhh-------hccccc--C-CC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 749 IIYWVSIK-VDTKEGIME-------VLDKKL--S-GS----FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 749 ~~~~~~~~-~~~~~~~~~-------~~~~~~--~-~~----~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
........ ........+ ...... . .. .......+.+++.+|++.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 234 MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp HHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCC
Confidence 00000000 000000000 000000 0 00 01124567788889999999999999999986
No 261
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=4.5e-37 Score=327.01 Aligned_cols=255 Identities=24% Similarity=0.359 Sum_probs=192.6
Q ss_pred HHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
..++|+..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+.++++++||||+++++++.
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 72 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----------EEKLSTILSEVMLLASLNHQYVVRYYAAWL 72 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----------HHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----------HHHHHHHHHHHHHHHhcCchHHHHHHHHHH
Confidence 457899999999999999999965 47999999998421 233567889999999999999999999875
Q ss_pred c-------------CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE
Q 003199 603 S-------------LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL 669 (840)
Q Consensus 603 ~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 669 (840)
+ ....++||||+++|+|.+++......+++..++.++.|++.||+|||+ ++|+||||||+||++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~ 149 (303)
T 1zy4_A 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFI 149 (303)
T ss_dssp ECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEE
T ss_pred hhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEE
Confidence 4 456789999999999999998766678899999999999999999999 999999999999999
Q ss_pred cCCCCCeeecccchhhhhccCC-----------CCcceecccccccccCccccccC-CCCccccchhHHHHHHHHHhCCC
Q 003199 670 DVNYQPKVADFGIAKVLQARGG-----------KDSTTTVIAGTYGYLAPEYAYSS-KATTKCDVYSFGVVLMELITGRK 737 (840)
Q Consensus 670 ~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~slG~il~el~tg~~ 737 (840)
+.++.+||+|||+++....... .........||+.|+|||.+.+. .++.++||||||+++|||++
T Consensus 150 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~--- 226 (303)
T 1zy4_A 150 DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY--- 226 (303)
T ss_dssp CTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---
T ss_pred cCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---
Confidence 9999999999999976542110 01223456789999999998764 68999999999999999998
Q ss_pred CCCCCCCCCcchhhhhhhhhccccchhhhcccccCCCc-HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 738 PVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSF-RDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 738 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
||... ............ .....+..+ ......+.+++.+|++.||.+|||+.+++++-
T Consensus 227 p~~~~----~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~ 285 (303)
T 1zy4_A 227 PFSTG----MERVNILKKLRS--------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG 285 (303)
T ss_dssp CCSSH----HHHHHHHHHHHS--------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred ccCCc----hhHHHHHHhccc--------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence 55321 000011100000 001111111 22334567788899999999999999999863
No 262
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=333.28 Aligned_cols=251 Identities=25% Similarity=0.347 Sum_probs=191.2
Q ss_pred HHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEe
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFS 602 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 602 (840)
..+|+..+.||+|+||.||+|.. .+|+.||||++..... ..+.+.+|+.+++++ +||||+++++++.
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-----------EEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-----------TTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-----------cHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 45688889999999999999966 4789999999853321 135678899999999 7999999999997
Q ss_pred c------CccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCC
Q 003199 603 S------LYCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQP 675 (840)
Q Consensus 603 ~------~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~ 675 (840)
. ....++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCE
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCE
Confidence 6 457899999999999999998642 468999999999999999999999 999999999999999999999
Q ss_pred eeecccchhhhhccCCCCcceecccccccccCccccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchh
Q 003199 676 KVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAY-----SSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNII 750 (840)
Q Consensus 676 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~ 750 (840)
||+|||++...... ........||+.|+|||++. +..++.++||||||+++|||++|+.||..... ...
T Consensus 169 kl~Dfg~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~ 242 (326)
T 2x7f_A 169 KLVDFGVSAQLDRT---VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP---MRA 242 (326)
T ss_dssp EECCCTTTC----------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH---HHH
T ss_pred EEeeCcCceecCcC---ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH---HHH
Confidence 99999999765431 12233457899999999986 56789999999999999999999999965311 000
Q ss_pred hhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 751 YWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 751 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.+ ..... .........+ ...+.+++.+||..||++||++.+++++
T Consensus 243 ~~-~~~~~-------~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 243 LF-LIPRN-------PAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HH-HHHHS-------CCCCCSCSCS---CHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HH-HhhcC-------ccccCCcccc---CHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 00 00000 0000011122 2456678889999999999999999986
No 263
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.3e-36 Score=333.57 Aligned_cols=310 Identities=22% Similarity=0.242 Sum_probs=191.0
Q ss_pred CCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCC
Q 003199 39 NLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNL 118 (840)
Q Consensus 39 ~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L 118 (840)
.+++|+.|++++| .+..+|...|..+++|++|+|++|.+.+..+..|..+++|++|+|++|.+++..|..|..+++|
T Consensus 43 ~l~~l~~l~l~~~---~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 119 (390)
T 3o6n_A 43 TLNNQKIVTFKNS---TMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL 119 (390)
T ss_dssp GGCCCSEEEEESC---EESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred ccCCceEEEecCC---chhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCC
Confidence 3566777777777 5666666666777777777777777776666667777777777777777776666666777777
Q ss_pred CeeecccCccccccCCc-ccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEcc
Q 003199 119 RQLELYYNQQLAGTIPE-ELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLY 197 (840)
Q Consensus 119 ~~L~L~~n~~~~~~~p~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 197 (840)
++|+|++|+ +. .+|. .|..+++|++|+|++|.+++..+..|..+++|++|++++|++++.. +..+++|++|+++
T Consensus 120 ~~L~L~~n~-l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~ 194 (390)
T 3o6n_A 120 TVLVLERND-LS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVS 194 (390)
T ss_dssp CEEECCSSC-CC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECC
T ss_pred CEEECCCCc-cC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeecc
Confidence 777777665 22 3343 3466666777777777666655666666666666666666666442 4455666666666
Q ss_pred CCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccC
Q 003199 198 DNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSI 277 (840)
Q Consensus 198 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 277 (840)
+|.+++. ...++|+.|++++|.++.. +.. ..++|+.|++++|.+++.
T Consensus 195 ~n~l~~~-----~~~~~L~~L~l~~n~l~~~-------------------------~~~--~~~~L~~L~l~~n~l~~~- 241 (390)
T 3o6n_A 195 YNLLSTL-----AIPIAVEELDASHNSINVV-------------------------RGP--VNVELTILKLQHNNLTDT- 241 (390)
T ss_dssp SSCCSEE-----ECCSSCSEEECCSSCCCEE-------------------------ECC--CCSSCCEEECCSSCCCCC-
T ss_pred ccccccc-----CCCCcceEEECCCCeeeec-------------------------ccc--ccccccEEECCCCCCccc-
Confidence 6666532 1223566666666655421 111 124566666666666532
Q ss_pred CccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCcc
Q 003199 278 PEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLK 357 (840)
Q Consensus 278 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 357 (840)
..+..+++|+.|++++|.+++..+..|..+++|++|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..++
T Consensus 242 -~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~ 318 (390)
T 3o6n_A 242 -AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFD 318 (390)
T ss_dssp -GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHT
T ss_pred -HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccC
Confidence 355666666666666666666666666666666666666666663 3444455666666666666665 3444555566
Q ss_pred ccchhcccCCccCCCcchhcccccCCCEEECcCccccc
Q 003199 358 KLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTG 395 (840)
Q Consensus 358 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 395 (840)
+|+.|+|++|++++. + +..+++|+.|+|++|++++
T Consensus 319 ~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 319 RLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp TCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEH
T ss_pred cCCEEECCCCcccee-C--chhhccCCEEEcCCCCccc
Confidence 666666666666533 2 4555666666666666654
No 264
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=2.6e-37 Score=330.33 Aligned_cols=255 Identities=22% Similarity=0.313 Sum_probs=194.9
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC--CCCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR--HKNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~ 603 (840)
+.|...+.||+|+||.||+|...+++.||||++..... .....+.+.+|++++++++ |+||+++++++..
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~ 99 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEA--------DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 99 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSC--------CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccc--------cccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence 45888899999999999999888899999999854331 1334577899999999997 5999999999999
Q ss_pred CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 604 LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
....++||| +.+++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||++++ +.+||+|||++
T Consensus 100 ~~~~~lv~e-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~ 173 (313)
T 3cek_A 100 DQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIVD-GMLKLIDFGIA 173 (313)
T ss_dssp SSEEEEEEC-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEET-TEEEECCCSSS
T ss_pred CCEEEEEEe-cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEEC-CeEEEeecccc
Confidence 999999999 56889999998764 68999999999999999999999 99999999999999965 78999999999
Q ss_pred hhhhccCCCCcceecccccccccCcccccc-----------CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAYS-----------SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYW 752 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 752 (840)
+...... .........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ...
T Consensus 174 ~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~- 248 (313)
T 3cek_A 174 NQMQPDT-TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISK- 248 (313)
T ss_dssp CC---------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHH-
T ss_pred ccccCcc-ccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH---HHH-
Confidence 8764321 1122334578999999999865 46888999999999999999999999753211 100
Q ss_pred hhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 753 VSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
....... .......... ...+.+++.+||+.||++||++.|++++-.
T Consensus 249 ~~~~~~~------~~~~~~~~~~---~~~l~~li~~~l~~dp~~Rps~~ell~h~~ 295 (313)
T 3cek_A 249 LHAIIDP------NHEIEFPDIP---EKDLQDVLKCCLKRDPKQRISIPELLAHPY 295 (313)
T ss_dssp HHHHHCT------TSCCCCCCCS---CHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred HHHHHhc------ccccCCcccc---hHHHHHHHHHHccCCcccCcCHHHHhcCcc
Confidence 0000000 0001111122 245677888999999999999999998753
No 265
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=344.89 Aligned_cols=250 Identities=22% Similarity=0.333 Sum_probs=186.2
Q ss_pred hcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEecCc
Q 003199 527 AMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFSSLY 605 (840)
Q Consensus 527 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 605 (840)
.|...+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +||||+++++++.+..
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~-------------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~ 91 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF-------------SFADREVQLLRESDEHPNVIRYFCTEKDRQ 91 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE-------------EECHHHHHHHHHSCCCTTBCCEEEEEEETT
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH-------------HHHHHHHHHHHhccCCCCcCeEEEEEecCC
Confidence 4677789999999997766666799999999854321 1245799999999 7999999999999999
Q ss_pred cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC---C--CCCeeecc
Q 003199 606 CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV---N--YQPKVADF 680 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~--~~~kl~Df 680 (840)
..++||||++ |+|.+++........+.++..++.||+.||+|||+ .+|+||||||+||+++. + ..+||+||
T Consensus 92 ~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DF 167 (432)
T 3p23_A 92 FQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDF 167 (432)
T ss_dssp EEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCT
T ss_pred EEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecc
Confidence 9999999995 69999998876567777888999999999999999 99999999999999953 2 35779999
Q ss_pred cchhhhhccCCCCcceecccccccccCccccc---cCCCCccccchhHHHHHHHHHh-CCCCCCCCCCCCcchhhhhhhh
Q 003199 681 GIAKVLQARGGKDSTTTVIAGTYGYLAPEYAY---SSKATTKCDVYSFGVVLMELIT-GRKPVEDDFGDNKNIIYWVSIK 756 (840)
Q Consensus 681 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~ 756 (840)
|+|+................||+.|+|||++. ...++.++|||||||++|||++ |..||..... .... ..
T Consensus 168 G~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~---~~~~---~~ 241 (432)
T 3p23_A 168 GLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ---RQAN---IL 241 (432)
T ss_dssp TEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT---HHHH---HH
T ss_pred cceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH---HHHH---HH
Confidence 99987643222223344567999999999987 4567889999999999999999 9999864311 0000 00
Q ss_pred hccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 757 VDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 757 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
... ...............+.+++.+|++.||++|||+.|++++
T Consensus 242 ~~~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 242 LGA-------CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp TTC-------CCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hcc-------CCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 000 0000001112234456788889999999999999999965
No 266
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2.4e-37 Score=337.71 Aligned_cols=268 Identities=23% Similarity=0.286 Sum_probs=186.1
Q ss_pred hHHHHHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceee
Q 003199 520 DQREILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLY 598 (840)
Q Consensus 520 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 598 (840)
......++|...+.||+|+||.||+|.. .+|+.||||++...... .....+|++.++.++||||++++
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~~~~l~~l~h~niv~~~ 85 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-----------RNRELQIMQDLAVLHHPNIVQLQ 85 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-----------CCHHHHHHHHHHHHCCTTBCCEE
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-----------cHHHHHHHHHHHhcCCCCcccHH
Confidence 3456678999999999999999999966 47899999988443211 12345677888888999999999
Q ss_pred eEEecCcc-------ceEEEeecCCCChHHHhhc---CCCCCChHHHHHHHHHHHHHHHHHh--hcCCCCeEecCCCCCC
Q 003199 599 CYFSSLYC-------NLLVYEYMPNGNLWDALHK---GLVHLDWPTRHKIAFGVAQGLAYLH--HGLLSPIIHRDIKSTN 666 (840)
Q Consensus 599 ~~~~~~~~-------~~lV~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH--~~~~~~ivH~Dlk~~N 666 (840)
+++..... .++||||+++ ++.+.+.. ....+++..+..++.|++.||.||| + ++|+||||||+|
T Consensus 86 ~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~N 161 (360)
T 3e3p_A 86 SYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHN 161 (360)
T ss_dssp EEEEEECSSCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGG
T ss_pred HhhhccccccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHH
Confidence 99865433 6899999976 55443332 3347899999999999999999999 7 999999999999
Q ss_pred EEEcC-CCCCeeecccchhhhhccCCCCcceecccccccccCccccccCC-CCccccchhHHHHHHHHHhCCCCCCCCCC
Q 003199 667 ILLDV-NYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSK-ATTKCDVYSFGVVLMELITGRKPVEDDFG 744 (840)
Q Consensus 667 ill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~ 744 (840)
|+++. ++.+||+|||+++.... ........||+.|+|||++.+.. ++.++|||||||++|||++|+.||.....
T Consensus 162 Ill~~~~~~~kl~Dfg~a~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~ 237 (360)
T 3e3p_A 162 VLVNEADGTLKLCDFGSAKKLSP----SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNS 237 (360)
T ss_dssp EEEETTTTEEEECCCTTCBCCCT----TSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EEEeCCCCcEEEeeCCCceecCC----CCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCCh
Confidence 99997 89999999999986643 22334557899999999986654 89999999999999999999999976321
Q ss_pred CCcchhhhhhhhhccccchhhhcc-----------------cccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 745 DNKNIIYWVSIKVDTKEGIMEVLD-----------------KKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 745 ~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
. .....................+ .............+.+++.+|++.||++|||+.|++++-
T Consensus 238 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 316 (360)
T 3e3p_A 238 A-GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHP 316 (360)
T ss_dssp H-HHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSG
T ss_pred H-HHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCc
Confidence 1 1111111100000000000000 000111111346788899999999999999999999873
No 267
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=334.89 Aligned_cols=260 Identities=22% Similarity=0.301 Sum_probs=195.1
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|...+.||+|+||.||+|.. .+|+.||||++..... .....+.+.+|+.+++.++||||+++++++...
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 95 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQ--------SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPA 95 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTS--------SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEeccccc--------chHHHHHHHHHHHHHHhcCCCCcccHhheEecc
Confidence 4678889999999999999965 5799999999854321 133456788999999999999999999999776
Q ss_pred cc------ceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeee
Q 003199 605 YC------NLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVA 678 (840)
Q Consensus 605 ~~------~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 678 (840)
.. .++||||++ ++|.+++.. .+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~ 168 (353)
T 3coi_A 96 SSLRNFYDFYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKIL 168 (353)
T ss_dssp SSGGGCCCCEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEEC
T ss_pred cccccceeEEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEe
Confidence 54 499999996 688887754 58999999999999999999999 999999999999999999999999
Q ss_pred cccchhhhhccCCCCcceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV 757 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 757 (840)
|||+++.... ......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.+.... ...........
T Consensus 169 Dfg~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~ 241 (353)
T 3coi_A 169 DFGLARHADA------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTG 241 (353)
T ss_dssp STTCTTC--------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHHC
T ss_pred ecccccCCCC------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhC
Confidence 9999976432 2334578999999998877 67899999999999999999999999753210 00000000000
Q ss_pred ccccc------------hhhhc----ccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 758 DTKEG------------IMEVL----DKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 758 ~~~~~------------~~~~~----~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
..... ..... ...+..........+.+++.+|++.||++|||+.|++++-
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp 307 (353)
T 3coi_A 242 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHP 307 (353)
T ss_dssp BCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSG
T ss_pred CCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCc
Confidence 00000 00000 0111111223345677888899999999999999999873
No 268
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=8.1e-37 Score=330.67 Aligned_cols=259 Identities=21% Similarity=0.295 Sum_probs=199.4
Q ss_pred HhcCccCeeeccCCcEEEEEEe--CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCC------ccee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL--NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKN------IVKL 597 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l 597 (840)
++|+..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+++++.++|++ ++++
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----------~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~ 82 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-----------DRYCEAARSEIQVLEHLNTTDPNSTFRCVQM 82 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-----------HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-----------CchhHHHHHHHHHHHHhhhcCCCCceeeEee
Confidence 5788899999999999999965 36899999998422 233566788999999887765 9999
Q ss_pred eeEEecCccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC-----
Q 003199 598 YCYFSSLYCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV----- 671 (840)
Q Consensus 598 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~----- 671 (840)
++++......++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+||+++.
T Consensus 83 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~ 158 (339)
T 1z57_A 83 LEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTE 158 (339)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEE
T ss_pred ecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEecccccc
Confidence 99999999999999999 899999997654 368899999999999999999999 99999999999999987
Q ss_pred --------------CCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCC
Q 003199 672 --------------NYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRK 737 (840)
Q Consensus 672 --------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~ 737 (840)
++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 232 (339)
T 1z57_A 159 AYNPKIKRDERTLINPDIKVVDFGSATYDDE------HHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFT 232 (339)
T ss_dssp EEC----CEEEEESCCCEEECCCSSCEETTS------CCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred ccCCccccccccccCCCceEeeCcccccCcc------ccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCC
Confidence 66899999999976432 2234578999999999999899999999999999999999999
Q ss_pred CCCCCCCCCcchhhhhhhhhccccch---------------------------hhhcc--cccCCCcHHHHHHHHHHHHH
Q 003199 738 PVEDDFGDNKNIIYWVSIKVDTKEGI---------------------------MEVLD--KKLSGSFRDEMIQVLRIAIR 788 (840)
Q Consensus 738 p~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~--~~~~~~~~~~~~~l~~l~~~ 788 (840)
||....... ................ ..... .............+.+++.+
T Consensus 233 pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 311 (339)
T 1z57_A 233 VFPTHDSKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQK 311 (339)
T ss_dssp SCCCSCHHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHH
T ss_pred CCCCCChHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHH
Confidence 997532110 0000000000000000 00000 00001112345678899999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 003199 789 CTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 789 cl~~dP~~Rps~~evl~~ 806 (840)
|++.||++|||+.|++++
T Consensus 312 ~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 312 MLEYDPAKRITLREALKH 329 (339)
T ss_dssp HTCSSTTTSCCHHHHTTS
T ss_pred HhCcCcccccCHHHHhcC
Confidence 999999999999999876
No 269
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=4.7e-37 Score=333.77 Aligned_cols=272 Identities=19% Similarity=0.248 Sum_probs=203.0
Q ss_pred HhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccC-------chhhHHHHHHHHHHHHHHhccCCCCcceee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSAS-------DTDQLQLDKGLKTEVETLGNIRHKNIVKLY 598 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~-------~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 598 (840)
.+|...+.||+|+||.||+|.. +|+.||||++.......... ........+.+.+|+.++++++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 5788899999999999999988 89999999985433211000 000111236789999999999999999999
Q ss_pred eEEecCccceEEEeecCCCChHHH------hhcC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC
Q 003199 599 CYFSSLYCNLLVYEYMPNGNLWDA------LHKG-LVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV 671 (840)
Q Consensus 599 ~~~~~~~~~~lV~e~~~~gsL~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~ 671 (840)
+++.+.+..++||||+++|+|.++ +... ...+++..+..++.|++.||+|||+. ++|+||||||+||+++.
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDK 187 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT--SCEECCCCCGGGEEECT
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhcc--CCEeecCCChHhEEEcC
Confidence 999999999999999999999998 6542 35789999999999999999999973 68999999999999999
Q ss_pred CCCCeeecccchhhhhccCCCCcceecccccccccCccccccC-CCCc-cccchhHHHHHHHHHhCCCCCCCCCCCCcch
Q 003199 672 NYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSS-KATT-KCDVYSFGVVLMELITGRKPVEDDFGDNKNI 749 (840)
Q Consensus 672 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~slG~il~el~tg~~p~~~~~~~~~~~ 749 (840)
++.+||+|||.+..... .......||+.|+|||.+.+. .++. ++||||||+++|||++|+.||...... ...
T Consensus 188 ~~~~kl~dfg~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~ 261 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVD-----KKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VEL 261 (348)
T ss_dssp TSCEEECCCTTCEECBT-----TEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHH
T ss_pred CCcEEEecccccccccc-----ccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHH
Confidence 99999999999976532 134456799999999999877 5666 999999999999999999999754221 111
Q ss_pred hhhhhhh-hccccchhhhccccc----CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 750 IYWVSIK-VDTKEGIMEVLDKKL----SGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 750 ~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
....... ............... ..........+.+++.+|++.||++|||+.|++++
T Consensus 262 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 262 FNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1110000 000000000000000 00002234567788889999999999999999985
No 270
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.4e-36 Score=349.52 Aligned_cols=333 Identities=18% Similarity=0.160 Sum_probs=156.8
Q ss_pred CCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCe
Q 003199 41 TNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQ 120 (840)
Q Consensus 41 ~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~ 120 (840)
.+++.|++++| .+..+|+..|..+++|++|+|++|.+.+..|..|+.+++|++|+|++|.|++..|..|+.+++|++
T Consensus 51 ~~l~~l~l~~~---~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 127 (597)
T 3oja_B 51 NNQKIVTFKNS---TMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 127 (597)
T ss_dssp CCCSEEEESSC---EESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCceEEEeeCC---CCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCE
Confidence 44455555554 444444444444555555555555554444444444555555555555544444444444444444
Q ss_pred eecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCc
Q 003199 121 LELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNS 200 (840)
Q Consensus 121 L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 200 (840)
|+|++|. +....+..|.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++.. +..+++|++|++++|.
T Consensus 128 L~L~~n~-l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 128 LVLERND-LSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNL 203 (597)
T ss_dssp EECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSC
T ss_pred EEeeCCC-CCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCc
Confidence 4444443 22211222344444444444444444444444444444444444444444321 2233444444444444
Q ss_pred CcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCcc
Q 003199 201 LTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEG 280 (840)
Q Consensus 201 l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 280 (840)
+++. ...++|+.|++++|.+... +..
T Consensus 204 l~~l-----------------------------------------------------~~~~~L~~L~ls~n~l~~~-~~~ 229 (597)
T 3oja_B 204 LSTL-----------------------------------------------------AIPIAVEELDASHNSINVV-RGP 229 (597)
T ss_dssp CSEE-----------------------------------------------------ECCTTCSEEECCSSCCCEE-ECS
T ss_pred cccc-----------------------------------------------------cCCchhheeeccCCccccc-ccc
Confidence 4321 1122344444444444421 111
Q ss_pred ccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccc
Q 003199 281 ILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLN 360 (840)
Q Consensus 281 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 360 (840)
+ .++|+.|+|++|.+++. ..++.+++|+.|+|++|.+++..|..+..+++|+.|+|++|.+++ +|..+..+++|+
T Consensus 230 ~--~~~L~~L~L~~n~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~ 304 (597)
T 3oja_B 230 V--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLK 304 (597)
T ss_dssp C--CSCCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCC
T ss_pred c--CCCCCEEECCCCCCCCC--hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCc
Confidence 1 13455555555555432 344555555555555555555555555555555555555555553 344444555555
Q ss_pred hhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhccCCCeEEccCCCCcCcCCcccccCCCcccccCCCCCc
Q 003199 361 LLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCELLPNSINFSNNRLSGPIPLSLIKEGLVESFSGNPGLC 440 (840)
Q Consensus 361 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~n~~~c 440 (840)
.|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..+. .++.|++++|+++|.++..+........+.+++..|
T Consensus 305 ~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~C 381 (597)
T 3oja_B 305 VLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKLSTHH--TLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHC 381 (597)
T ss_dssp EEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCCCTTC--CCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCCCC
T ss_pred EEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcChhhcC--CCCEEEeeCCCCCChhHHHHHHHHhhhccccccccC
Confidence 5555555555 3444455555555555555555533211111 335555555555555443333333344566777788
Q ss_pred cc
Q 003199 441 VS 442 (840)
Q Consensus 441 ~~ 442 (840)
+.
T Consensus 382 ~~ 383 (597)
T 3oja_B 382 KI 383 (597)
T ss_dssp CT
T ss_pred Cc
Confidence 65
No 271
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1e-36 Score=331.82 Aligned_cols=266 Identities=23% Similarity=0.306 Sum_probs=197.3
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.++|...+.||+|+||.||+|... +|+.||||++.... .......+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 80 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD---------KPLFALRTLREIKILKHFKHENIITIFNIQRP 80 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS---------SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc---------cchHHHHHHHHHHHHHhCcCCCcCCeeeeecc
Confidence 356888899999999999999665 78999999984321 12345678899999999999999999998865
Q ss_pred C-----ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeee
Q 003199 604 L-----YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVA 678 (840)
Q Consensus 604 ~-----~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 678 (840)
. ...++||||++ |+|.+++... .+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+
T Consensus 81 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~ 154 (353)
T 2b9h_A 81 DSFENFNEVYIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVC 154 (353)
T ss_dssp SCSTTCCCEEEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEEC
T ss_pred cccCccceEEEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEE
Confidence 4 67799999996 6999998874 68999999999999999999999 999999999999999999999999
Q ss_pred cccchhhhhccCCCC-------cceecccccccccCcccccc-CCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchh
Q 003199 679 DFGIAKVLQARGGKD-------STTTVIAGTYGYLAPEYAYS-SKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNII 750 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~ 750 (840)
|||+++......... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+... ....
T Consensus 155 Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~ 232 (353)
T 2b9h_A 155 DFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDY--RHQL 232 (353)
T ss_dssp CCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHH
T ss_pred ecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCc--HHHH
Confidence 999998764321111 11233578999999998754 6789999999999999999999999975321 0000
Q ss_pred hhhhhhhcccc-----------chhhhc---ccccCCC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 751 YWVSIKVDTKE-----------GIMEVL---DKKLSGS----FRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 751 ~~~~~~~~~~~-----------~~~~~~---~~~~~~~----~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
........... ...+.. ....... +......+.+++.+|++.||++|||+.|++++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp 307 (353)
T 2b9h_A 233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHP 307 (353)
T ss_dssp HHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred HHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCc
Confidence 00000000000 000000 0000000 112335677888999999999999999999863
No 272
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.6e-36 Score=333.39 Aligned_cols=199 Identities=26% Similarity=0.284 Sum_probs=168.4
Q ss_pred HHhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-CC-----Cccee
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-HK-----NIVKL 597 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l 597 (840)
.++|...+.||+|+||+||+|... +++.||||++... ......+..|+.+++.++ |+ +++++
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~ 121 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-----------KAFLNQAQIEVRLLELMNKHDTEMKYYIVHL 121 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-----------HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-----------HHHHHHHHHHHHHHHHHHhcccccceeEEEe
Confidence 467889999999999999999654 7899999998432 123456677888888775 44 49999
Q ss_pred eeEEecCccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEc--CCCC
Q 003199 598 YCYFSSLYCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLD--VNYQ 674 (840)
Q Consensus 598 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~--~~~~ 674 (840)
++++......++||||++ |+|.+++.... ..+++..+..++.|++.||+|||+ +..+||||||||+|||++ .++.
T Consensus 122 ~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~ 199 (382)
T 2vx3_A 122 KRHFMFRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSA 199 (382)
T ss_dssp EEEEEETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCC
T ss_pred eeeeccCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCc
Confidence 999999999999999995 59999998753 468999999999999999999994 127899999999999995 4778
Q ss_pred CeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCC
Q 003199 675 PKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDD 742 (840)
Q Consensus 675 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~ 742 (840)
+||+|||+|+.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 200 ~kL~DFG~a~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 200 IKIVDFGSSCQLGQ------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EEECCCTTCEETTC------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEEEeccCceeccc------ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999976532 223467899999999999999999999999999999999999999753
No 273
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.1e-37 Score=330.32 Aligned_cols=253 Identities=26% Similarity=0.329 Sum_probs=174.7
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHH-HHhccCCCCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVE-TLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~ 603 (840)
++|...+.||+|+||.||+|... +|+.||||++..... ......+..|+. +++.++||||+++++++..
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~ 92 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD---------EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR 92 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC---------HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC---------chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe
Confidence 46778889999999999999664 799999999854321 122334455555 7788899999999999999
Q ss_pred CccceEEEeecCCCChHHHhhc----CCCCCChHHHHHHHHHHHHHHHHHhhcCCC-CeEecCCCCCCEEEcCCCCCeee
Q 003199 604 LYCNLLVYEYMPNGNLWDALHK----GLVHLDWPTRHKIAFGVAQGLAYLHHGLLS-PIIHRDIKSTNILLDVNYQPKVA 678 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlk~~Nill~~~~~~kl~ 678 (840)
.+..++||||+++ +|.+++.. ....+++..+..++.|++.||.|||+ . +|+||||||+||+++.++.+||+
T Consensus 93 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~ 168 (327)
T 3aln_A 93 EGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLC 168 (327)
T ss_dssp SSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEEC
T ss_pred CCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEc
Confidence 9999999999975 88777653 23478999999999999999999999 7 99999999999999999999999
Q ss_pred cccchhhhhccCCCCcceecccccccccCcccc----ccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhh
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYA----YSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVS 754 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~ 754 (840)
|||+++.... ........||+.|+|||++ .+..++.++||||||+++|||++|+.||............
T Consensus 169 Dfg~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~--- 241 (327)
T 3aln_A 169 DFGISGQLVD----SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQ--- 241 (327)
T ss_dssp CCSSSCC----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CC---
T ss_pred cCCCceeccc----ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHH---
Confidence 9999976633 1222344799999999998 4567899999999999999999999999753211110000
Q ss_pred hhhccccchhhhcccccCC-CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 755 IKVDTKEGIMEVLDKKLSG-SFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 755 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
........+.. ........+.+++.+||+.||++|||+.+++++
T Consensus 242 --------~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 242 --------VVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp --------CCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred --------HhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhC
Confidence 00000001110 011223467778889999999999999999875
No 274
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=6.7e-37 Score=341.49 Aligned_cols=251 Identities=25% Similarity=0.349 Sum_probs=184.7
Q ss_pred cCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEecCcc
Q 003199 528 MTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFSSLYC 606 (840)
Q Consensus 528 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 606 (840)
|...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+...
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-------------~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~ 83 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-------------FCDIALMEIKLLTESDDHPNVIRYYCSETTDRF 83 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-------------GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-------------HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCe
Confidence 4456789999999998877778999999988432 134567899999886 89999999999999999
Q ss_pred ceEEEeecCCCChHHHhhcCCCC------CChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCC--------
Q 003199 607 NLLVYEYMPNGNLWDALHKGLVH------LDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVN-------- 672 (840)
Q Consensus 607 ~~lV~e~~~~gsL~~~l~~~~~~------~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~-------- 672 (840)
.++||||++ |+|.+++...... ..+..+..++.||+.||+|||+ .+|+||||||+||+++.+
T Consensus 84 ~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~ 159 (434)
T 2rio_A 84 LYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQ 159 (434)
T ss_dssp EEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCT
T ss_pred EEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccc
Confidence 999999995 6999999865311 1344567899999999999999 999999999999999754
Q ss_pred -----CCCeeecccchhhhhccCCC-CcceecccccccccCcccccc-------CCCCccccchhHHHHHHHHHh-CCCC
Q 003199 673 -----YQPKVADFGIAKVLQARGGK-DSTTTVIAGTYGYLAPEYAYS-------SKATTKCDVYSFGVVLMELIT-GRKP 738 (840)
Q Consensus 673 -----~~~kl~Dfg~a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~slG~il~el~t-g~~p 738 (840)
+.+||+|||+++........ ........||+.|+|||++.+ ..++.++|||||||++|||++ |+.|
T Consensus 160 ~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~P 239 (434)
T 2rio_A 160 TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239 (434)
T ss_dssp TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCT
T ss_pred cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCC
Confidence 47999999999876432111 112234679999999999865 578999999999999999999 9999
Q ss_pred CCCCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 739 VEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 739 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
|.+..... ..... .... ..............++.+++.+|++.||++|||+.|++++
T Consensus 240 f~~~~~~~---~~i~~----~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 240 FGDKYSRE---SNIIR----GIFS----LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp TCSTTTHH---HHHHH----TCCC----CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCchhhH---HHHhc----CCCC----cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 96532111 00000 0000 0000011123456678889999999999999999999875
No 275
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.3e-37 Score=331.55 Aligned_cols=255 Identities=20% Similarity=0.258 Sum_probs=171.8
Q ss_pred HHHhcCccC-eeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEE
Q 003199 524 ILEAMTEKN-KVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYF 601 (840)
Q Consensus 524 ~~~~~~~~~-~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 601 (840)
+.++|...+ .||+|+||.||+|... +|+.||||++.... . ...+....++.+.||||+++++++
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----------~---~~~e~~~~~~~~~h~~i~~~~~~~ 91 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----------K---ARQEVDHHWQASGGPHIVCILDVY 91 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----------H---HHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----------H---HHHHHHHHHHhcCCCChHHHHHHH
Confidence 345677754 6999999999999665 79999999984321 1 111222335566899999999998
Q ss_pred ec----CccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC---CC
Q 003199 602 SS----LYCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV---NY 673 (840)
Q Consensus 602 ~~----~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~~ 673 (840)
.. ....++||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ ++|+||||||+||+++. ++
T Consensus 92 ~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~ 168 (336)
T 3fhr_A 92 ENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDA 168 (336)
T ss_dssp EEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTC
T ss_pred hhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCc
Confidence 76 445799999999999999998753 468999999999999999999999 99999999999999976 45
Q ss_pred CCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 003199 674 QPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWV 753 (840)
Q Consensus 674 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 753 (840)
.+||+|||+++.... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..............
T Consensus 169 ~~kl~Dfg~~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~ 243 (336)
T 3fhr_A 169 VLKLTDFGFAKETTQ-----NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKR 243 (336)
T ss_dssp CEEECCCTTCEEC---------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred eEEEeccccceeccc-----cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHH
Confidence 599999999976432 223345789999999999888899999999999999999999999975422111000000
Q ss_pred hhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 754 SIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
.. .........+.+......+.+++.+|++.||++|||+.|++++-.
T Consensus 244 --~~------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~ 290 (336)
T 3fhr_A 244 --RI------RLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPW 290 (336)
T ss_dssp ---------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHH
T ss_pred --hh------hccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcc
Confidence 00 000000011111223456778888999999999999999999643
No 276
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.2e-36 Score=331.89 Aligned_cols=261 Identities=23% Similarity=0.250 Sum_probs=196.3
Q ss_pred HhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-----------CCC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-----------HKN 593 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~n 593 (840)
.+|...+.||+|+||+||+|.. .+|+.||||++... ....+.+.+|+.+++++. |+|
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~ 87 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-----------KVYTEAAEDEIKLLQRVNDADNTKEDSMGANH 87 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-----------HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-----------ccchhhhhHHHHHHHHhhcccccchhccccch
Confidence 4688889999999999999965 57899999998432 123456788999988886 899
Q ss_pred cceeeeEEecCc----cceEEEeecCCCChHHHhhcC-CCCCChHHHHHHHHHHHHHHHHHhhcCCC-CeEecCCCCCCE
Q 003199 594 IVKLYCYFSSLY----CNLLVYEYMPNGNLWDALHKG-LVHLDWPTRHKIAFGVAQGLAYLHHGLLS-PIIHRDIKSTNI 667 (840)
Q Consensus 594 iv~l~~~~~~~~----~~~lV~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlk~~Ni 667 (840)
|+++++++.... ..++||||+ +++|.+++... ...+++..+..++.||+.||+|||+ + +|+||||||+||
T Consensus 88 i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NI 163 (373)
T 1q8y_A 88 ILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENV 163 (373)
T ss_dssp BCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGE
T ss_pred HHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHe
Confidence 999999987654 779999999 99999999764 2458999999999999999999999 8 999999999999
Q ss_pred EEc------CCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 003199 668 LLD------VNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVED 741 (840)
Q Consensus 668 ll~------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 741 (840)
+++ ..+.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 164 ll~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 237 (373)
T 1q8y_A 164 LMEIVDSPENLIQIKIADLGNACWYDE------HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237 (373)
T ss_dssp EEEEEETTTTEEEEEECCCTTCEETTB------CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred EEeccCCCcCcceEEEcccccccccCC------CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 995 344799999999976533 22345789999999999999999999999999999999999999975
Q ss_pred CCCCCcc-----hhhhhhhhhcc-----------------ccch-----------hhhcccccCCCcHHHHHHHHHHHHH
Q 003199 742 DFGDNKN-----IIYWVSIKVDT-----------------KEGI-----------MEVLDKKLSGSFRDEMIQVLRIAIR 788 (840)
Q Consensus 742 ~~~~~~~-----~~~~~~~~~~~-----------------~~~~-----------~~~~~~~~~~~~~~~~~~l~~l~~~ 788 (840)
....... ........... .... ..... ............+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~ 316 (373)
T 1q8y_A 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLT-EKYKFSKDEAKEISDFLSP 316 (373)
T ss_dssp -------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHH-HTTCCCHHHHHHHHHHHGG
T ss_pred CcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhh-hcccCCcchHHHHHHHHHH
Confidence 4321100 00000000000 0000 00000 0011224556788899999
Q ss_pred ccCCCCCCCCCHHHHHHHhh
Q 003199 789 CTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 789 cl~~dP~~Rps~~evl~~L~ 808 (840)
|++.||++|||++|++++-.
T Consensus 317 ~L~~dP~~Rpt~~ell~hp~ 336 (373)
T 1q8y_A 317 MLQLDPRKRADAGGLVNHPW 336 (373)
T ss_dssp GGCSSTTTCBCHHHHHTCGG
T ss_pred HhccCccccCCHHHHhhChh
Confidence 99999999999999998744
No 277
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=326.20 Aligned_cols=253 Identities=24% Similarity=0.327 Sum_probs=179.6
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
++|+..+.||+|+||.||+|... +|+.||||++..... .....+.+.++..+++.++||||+++++++.+.
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~ 96 (318)
T 2dyl_A 25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN--------KEENKRILMDLDVVLKSHDCPYIVQCFGTFITN 96 (318)
T ss_dssp GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC--------HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred ccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc--------chHHHHHHHHHHHHHHhcCCCceeeEEEEEecC
Confidence 56888899999999999999765 799999999854321 122234455566678888999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCC-CeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLS-PIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
...++||||+ ++.+..........+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++
T Consensus 97 ~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 172 (318)
T 2dyl_A 97 TDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGIS 172 (318)
T ss_dssp SEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred CcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCc
Confidence 9999999999 556665555444578999999999999999999998 6 9999999999999999999999999999
Q ss_pred hhhhccCCCCcceecccccccccCccccc-----cCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 684 KVLQARGGKDSTTTVIAGTYGYLAPEYAY-----SSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 684 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
..... ........||+.|+|||.+. ...++.++||||||+++|||++|+.||..... ....+.... .
T Consensus 173 ~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---~~~~~~~~~-~ 244 (318)
T 2dyl_A 173 GRLVD----DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT---DFEVLTKVL-Q 244 (318)
T ss_dssp ------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS---HHHHHHHHH-H
T ss_pred hhccC----CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc---cHHHHHHHh-c
Confidence 76643 12233456899999999984 45688999999999999999999999975211 111111110 0
Q ss_pred cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 003199 759 TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~ 806 (840)
.. ..... ........+.+++.+||+.||.+||++.+++++
T Consensus 245 ~~-------~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 245 EE-------PPLLP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp SC-------CCCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred cC-------CCCCC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 00 00011 011123456778889999999999999999875
No 278
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1e-35 Score=328.42 Aligned_cols=334 Identities=20% Similarity=0.187 Sum_probs=273.3
Q ss_pred ccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCe
Q 003199 66 RLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTD 145 (840)
Q Consensus 66 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~ 145 (840)
.+++++.|++++|.++...+..|..+++|++|+|++|.+++..+..|..+++|++|+|++|+ +.+..|..|.++++|++
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNA-IRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCC-CCcCCHHHhcCCCCCCE
Confidence 46789999999999987666668889999999999999997777899999999999999997 55566677899999999
Q ss_pred eeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccc
Q 003199 146 LDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKL 225 (840)
Q Consensus 146 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 225 (840)
|+|++|.++...+..|..+++|++|++++|.+++..+..|..+++|++|++++|++++. .+..+++|+.|++++|.+
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l 198 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLL 198 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCC
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccc
Confidence 99999999966556678899999999999999988888899999999999999999854 356678888999988887
Q ss_pred cccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCccc
Q 003199 226 SGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTV 305 (840)
Q Consensus 226 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 305 (840)
++ +...++|++|++++|.+... |.. ..++|+.|++++|++++. ..+
T Consensus 199 ~~-----------------------------~~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l~~n~l~~~--~~l 244 (390)
T 3o6n_A 199 ST-----------------------------LAIPIAVEELDASHNSINVV-RGP--VNVELTILKLQHNNLTDT--AWL 244 (390)
T ss_dssp SE-----------------------------EECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEECCSSCCCCC--GGG
T ss_pred cc-----------------------------cCCCCcceEEECCCCeeeec-ccc--ccccccEEECCCCCCccc--HHH
Confidence 62 22335788999999999844 433 247899999999999864 568
Q ss_pred CCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCE
Q 003199 306 GNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNV 385 (840)
Q Consensus 306 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 385 (840)
..+++|++|+|++|++++..|..+..+++|+.|+|++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.
T Consensus 245 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~ 322 (390)
T 3o6n_A 245 LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 322 (390)
T ss_dssp GGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred cCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCE
Confidence 889999999999999998888999999999999999999984 5666778899999999999998 56777888999999
Q ss_pred EECcCccccccCCchhhcc-CCCeEEccCCCCcCcCCcccccCCCcccccCCCCCccc
Q 003199 386 LDLSNNLLTGYIPESLCEL-LPNSINFSNNRLSGPIPLSLIKEGLVESFSGNPGLCVS 442 (840)
Q Consensus 386 L~l~~N~l~~~~p~~~~~~-~~~~l~l~~N~l~~~~p~~~~~~~~~~~~~~n~~~c~~ 442 (840)
|+|++|++++. | +..+ .++.|++++|++.+.....+........+.+++..|..
T Consensus 323 L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 323 LYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLRALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp EECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHHHHTTTCCTTTBCCCCSCCCT
T ss_pred EECCCCcccee-C--chhhccCCEEEcCCCCccchhHHHHHHHHHhhcccccCceecc
Confidence 99999999854 3 2223 46889999999998766555444444556677777753
No 279
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.4e-37 Score=327.81 Aligned_cols=252 Identities=24% Similarity=0.329 Sum_probs=191.1
Q ss_pred HHHHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc----CCCCcce
Q 003199 522 REILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI----RHKNIVK 596 (840)
Q Consensus 522 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l----~h~niv~ 596 (840)
....++|...+.||+|+||.||+|.. .+|+.||||++........ ........+.+|+.++.++ +|+||++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~ 102 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGW----SPLSDSVTCPLEVALLWKVGAGGGHPGVIR 102 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC------------CCCCHHHHHHHHHHSSCCCSSBCC
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEeccccccc----ccchhhHHHHHHHHHHHhhcccCCCCCeee
Confidence 44567899999999999999999965 4789999999854432110 0111223456788888888 8999999
Q ss_pred eeeEEecCccceEEEee-cCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEc-CCCC
Q 003199 597 LYCYFSSLYCNLLVYEY-MPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLD-VNYQ 674 (840)
Q Consensus 597 l~~~~~~~~~~~lV~e~-~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~~ 674 (840)
+++++...+..++|+|| +.+++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++ .++.
T Consensus 103 ~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~ 178 (312)
T 2iwi_A 103 LLDWFETQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGC 178 (312)
T ss_dssp EEEEC-----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTE
T ss_pred EEEEEecCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCe
Confidence 99999999999999999 78999999998754 68999999999999999999999 8999999999999999 8899
Q ss_pred CeeecccchhhhhccCCCCcceecccccccccCccccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhh
Q 003199 675 PKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKA-TTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWV 753 (840)
Q Consensus 675 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~ 753 (840)
+||+|||+++.... .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ..
T Consensus 179 ~kl~dfg~~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~- 245 (312)
T 2iwi_A 179 AKLIDFGSGALLHD-----EPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EI- 245 (312)
T ss_dssp EEECCCSSCEECCS-----SCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HH-
T ss_pred EEEEEcchhhhccc-----CcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HH-
Confidence 99999999976532 22344568999999999877666 458999999999999999999996420 00
Q ss_pred hhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 754 SIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
... ....... ....+.+++.+|++.||++|||+.|++++-.
T Consensus 246 ---~~~--------~~~~~~~---~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~ 286 (312)
T 2iwi_A 246 ---LEA--------ELHFPAH---VSPDCCALIRRCLAPKPSSRPSLEEILLDPW 286 (312)
T ss_dssp ---HHT--------CCCCCTT---SCHHHHHHHHHHTCSSTTTSCCHHHHHHSTT
T ss_pred ---hhh--------ccCCccc---CCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 000 0011122 2345667888999999999999999998643
No 280
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.9e-37 Score=328.99 Aligned_cols=249 Identities=23% Similarity=0.328 Sum_probs=197.7
Q ss_pred HHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC--CCCcceeeeE
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR--HKNIVKLYCY 600 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~ 600 (840)
+.++|+..+.||+|+||.||+|.. .+|+.||||++.......... ....+.+.+|+.++++++ |+||++++++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~----~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~ 116 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE----LPNGTRVPMEVVLLKKVSSGFSGVIRLLDW 116 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEE----CTTCCEEEHHHHHHHHHCSSSCSBCCEEEE
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhh----hhhhhHHHHHHHHHHhhccCCCCceEEEEE
Confidence 345688899999999999999964 578999999986543221000 011234567899999996 5999999999
Q ss_pred EecCccceEEEeecCC-CChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEc-CCCCCeee
Q 003199 601 FSSLYCNLLVYEYMPN-GNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLD-VNYQPKVA 678 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~-~~~~~kl~ 678 (840)
+......++|+||+.+ ++|.+++.... .+++..+..++.|++.||+|||+ .+|+||||||+||+++ +++.+||+
T Consensus 117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~ 192 (320)
T 3a99_A 117 FERPDSFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLI 192 (320)
T ss_dssp EECSSEEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEEC
T ss_pred EecCCcEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEe
Confidence 9999999999999976 89999998754 68999999999999999999999 9999999999999999 78899999
Q ss_pred cccchhhhhccCCCCcceecccccccccCccccccCCC-CccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhh
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKA-TTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKV 757 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~ 757 (840)
|||+++.... .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... .. .
T Consensus 193 Dfg~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~----~ 256 (320)
T 3a99_A 193 DFGSGALLKD-----TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EI----I 256 (320)
T ss_dssp CCTTCEECCS-----SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HH----H
T ss_pred eCcccccccc-----ccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hh----h
Confidence 9999976532 22334569999999999877665 688999999999999999999996420 00 0
Q ss_pred ccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHh
Q 003199 758 DTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLL 807 (840)
Q Consensus 758 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L 807 (840)
.. .......+ ...+.+++.+||+.||++|||+.|++++-
T Consensus 257 ~~--------~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~~ll~hp 295 (320)
T 3a99_A 257 RG--------QVFFRQRV---SSECQHLIRWCLALRPSDRPTFEEIQNHP 295 (320)
T ss_dssp HC--------CCCCSSCC---CHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred cc--------cccccccC---CHHHHHHHHHHccCChhhCcCHHHHhcCH
Confidence 00 00111222 24566788899999999999999999863
No 281
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.1e-36 Score=328.28 Aligned_cols=258 Identities=23% Similarity=0.303 Sum_probs=196.6
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CC-cEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCC------ccee
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SG-EVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKN------IVKL 597 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l 597 (840)
++|+..+.||+|+||+||+|... ++ +.||||++... ....+.+.+|+.+++.++|++ ++.+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-----------~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~ 87 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-----------GKYREAARLEINVLKKIKEKDKENKFLCVLM 87 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-----------HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-----------ccchhHHHHHHHHHHHHhhcCCCCceeEEEe
Confidence 57888999999999999999654 44 78999998422 123466788999999998766 8999
Q ss_pred eeEEecCccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE-------
Q 003199 598 YCYFSSLYCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL------- 669 (840)
Q Consensus 598 ~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill------- 669 (840)
++++......++||||+ ++++.+++.... ..+++.++..++.|++.||+|||+ ++|+||||||+||++
T Consensus 88 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~ 163 (355)
T 2eu9_A 88 SDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFET 163 (355)
T ss_dssp EEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEE
T ss_pred eeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecccccc
Confidence 99999999999999999 677777776543 468999999999999999999999 999999999999999
Q ss_pred ------------cCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCC
Q 003199 670 ------------DVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRK 737 (840)
Q Consensus 670 ------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~ 737 (840)
+.++.+||+|||+++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~ 237 (355)
T 2eu9_A 164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHE------HHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFT 237 (355)
T ss_dssp EECCC-CCCEEEESCCCEEECCCTTCEETTS------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred cccccccccccccCCCcEEEeecCccccccc------cccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCC
Confidence 5678999999999976432 2234579999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcchhhhhhhhh-ccccch---------------------------hhhccc--ccCCCcHHHHHHHHHHHH
Q 003199 738 PVEDDFGDNKNIIYWVSIKV-DTKEGI---------------------------MEVLDK--KLSGSFRDEMIQVLRIAI 787 (840)
Q Consensus 738 p~~~~~~~~~~~~~~~~~~~-~~~~~~---------------------------~~~~~~--~~~~~~~~~~~~l~~l~~ 787 (840)
||..... ........... ...... ...... ............+.+++.
T Consensus 238 pf~~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 315 (355)
T 2eu9_A 238 LFQTHEN--REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMR 315 (355)
T ss_dssp SCCCSSH--HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHH
T ss_pred CCCCCCH--HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHH
Confidence 9975321 11100000000 000000 000000 000111233457889999
Q ss_pred HccCCCCCCCCCHHHHHHH
Q 003199 788 RCTSKSPATRPTMNEVVQL 806 (840)
Q Consensus 788 ~cl~~dP~~Rps~~evl~~ 806 (840)
+|++.||++|||+.|++++
T Consensus 316 ~~L~~dP~~Rpt~~e~l~h 334 (355)
T 2eu9_A 316 RMLEFDPAQRITLAEALLH 334 (355)
T ss_dssp HHTCSSTTTSCCHHHHTTS
T ss_pred HHhcCChhhCcCHHHHhcC
Confidence 9999999999999999876
No 282
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.4e-35 Score=318.95 Aligned_cols=307 Identities=24% Similarity=0.333 Sum_probs=160.3
Q ss_pred CCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCC
Q 003199 13 FSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVT 92 (840)
Q Consensus 13 ~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 92 (840)
+..+++|++|++++|.++ .+|. +..+++|++|++++| .+..++. +..+++|++|++++|.++.. +.+..++
T Consensus 40 ~~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n---~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~ 110 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGN---QITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLT 110 (347)
T ss_dssp HHHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSS---CCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCT
T ss_pred chhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCC---ccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCC
Confidence 344555666666666665 3332 555666666666666 3333333 55555555555555555432 2355555
Q ss_pred CCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEe
Q 003199 93 SLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQL 172 (840)
Q Consensus 93 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 172 (840)
+|++|+|++|.+++ .+. +..+++|+.|++++|. .... +..+..+++|++|++
T Consensus 111 ~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~l~~n~-------------------------~~~~-~~~~~~l~~L~~L~l 162 (347)
T 4fmz_A 111 NLRELYLNEDNISD-ISP-LANLTKMYSLNLGANH-------------------------NLSD-LSPLSNMTGLNYLTV 162 (347)
T ss_dssp TCSEEECTTSCCCC-CGG-GTTCTTCCEEECTTCT-------------------------TCCC-CGGGTTCTTCCEEEC
T ss_pred cCCEEECcCCcccC-chh-hccCCceeEEECCCCC-------------------------Cccc-ccchhhCCCCcEEEe
Confidence 55555555555552 222 4455555555555553 3211 222444445555555
Q ss_pred eccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhccccccccc
Q 003199 173 YNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGV 252 (840)
Q Consensus 173 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~ 252 (840)
++|.+.+..+ +..+++|++|++++|++.+..+ +..+++|+.|++++|.+++..+
T Consensus 163 ~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~---------------------- 216 (347)
T 4fmz_A 163 TESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP---------------------- 216 (347)
T ss_dssp CSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG----------------------
T ss_pred cCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch----------------------
Confidence 5554443322 4455555555555555543221 4445555555555555442110
Q ss_pred CCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhccc
Q 003199 253 LPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRA 332 (840)
Q Consensus 253 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 332 (840)
+..+++|++|++++|++++. +. +..+++|+.|++++|.+++. ..+..+++|+.|++++|++++. ..+..+
T Consensus 217 ----~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l 286 (347)
T 4fmz_A 217 ----VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNL 286 (347)
T ss_dssp ----GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGC
T ss_pred ----hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCC
Confidence 33344444444444444422 21 44555555555555555542 2355556666666666666543 345566
Q ss_pred CcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCcccc
Q 003199 333 ISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLT 394 (840)
Q Consensus 333 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 394 (840)
++|+.|++++|++++..|..++.+++|+.|+|++|++++..| +..+++|++|++++|+|+
T Consensus 287 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 287 SQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp TTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 666677777776666666666667777777777777765555 666777777777777765
No 283
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=3.9e-35 Score=341.54 Aligned_cols=314 Identities=20% Similarity=0.177 Sum_probs=238.0
Q ss_pred CCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCC
Q 003199 15 PMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSL 94 (840)
Q Consensus 15 ~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 94 (840)
.+.+++.|++++|.++...+..|..+++|+.|+|++| .+..+++..|..+++|+.|+|++|.+++..|..|+++++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n---~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 125 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDL---QIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLL 125 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTS---CCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCC---CCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCC
Confidence 4688999999999999777777899999999999999 7788888899999999999999999999888999999999
Q ss_pred cEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeec
Q 003199 95 TDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYN 174 (840)
Q Consensus 95 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 174 (840)
++|+|++|.|++..+..|..+++|++|+|++|. +.+..|..|..+++|++|+|++|.+++. .+..+++|+.|++++
T Consensus 126 ~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l~~ 201 (597)
T 3oja_B 126 TVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN-LERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSY 201 (597)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC-CCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEECCS
T ss_pred CEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCc-CCCCChhhhhcCCcCcEEECcCCCCCCc---Chhhhhhhhhhhccc
Confidence 999999999996666678999999999999997 5667777899999999999999999964 266789999999999
Q ss_pred cccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCC
Q 003199 175 NSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLP 254 (840)
Q Consensus 175 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 254 (840)
|.+++. ...++|+.|++++|.+....+.. .++|+.|+|++|.+++ +
T Consensus 202 n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--------------------------~ 247 (597)
T 3oja_B 202 NLLSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--------------------------T 247 (597)
T ss_dssp SCCSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--------------------------C
T ss_pred Cccccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--------------------------C
Confidence 999853 34568899999999887443322 2466777777766652 1
Q ss_pred cccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCc
Q 003199 255 DSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAIS 334 (840)
Q Consensus 255 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 334 (840)
..+..+++|+.|+|++|.+++..|..|..+++|+.|+|++|.+++ +|..+..+++
T Consensus 248 ~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-------------------------l~~~~~~l~~ 302 (597)
T 3oja_B 248 AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-------------------------LNLYGQPIPT 302 (597)
T ss_dssp GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-------------------------EECSSSCCTT
T ss_pred hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-------------------------CCcccccCCC
Confidence 234455555555555555555555555555555555555554443 2344445556
Q ss_pred ccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCC
Q 003199 335 LVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 335 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 398 (840)
|+.|+|++|.++ .+|..++.+++|+.|+|++|+|++.. +..+++|+.|+|++|++++..+
T Consensus 303 L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 303 LKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCNSL 362 (597)
T ss_dssp CCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHHHH
T ss_pred CcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCChhH
Confidence 666666666666 45555666667777777777776432 5567788888888888886543
No 284
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.2e-36 Score=345.30 Aligned_cols=260 Identities=25% Similarity=0.295 Sum_probs=194.5
Q ss_pred HHHhcCccCeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 524 ILEAMTEKNKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 524 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
...+|...+.||+|+||.||+|.. .+|+.||||++.... .....+.+.+|++++++++||||+++++++.
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~---------~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~ 82 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL---------SPKNRERWCLEIQIMKKLNHPNVVSAREVPD 82 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC---------CHHHHHHHHHHHHHHHHCCBTTBCCEEECCT
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC---------CHHHHHHHHHHHHHHHhCCCCCCCceeeeec
Confidence 447899999999999999999965 578999999884321 1234567899999999999999999999876
Q ss_pred c------CccceEEEeecCCCChHHHhhcCC--CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC
Q 003199 603 S------LYCNLLVYEYMPNGNLWDALHKGL--VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ 674 (840)
Q Consensus 603 ~------~~~~~lV~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~ 674 (840)
. ....++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 83 ~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~ 159 (676)
T 3qa8_A 83 GLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQ 159 (676)
T ss_dssp TTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSS
T ss_pred ccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCC
Confidence 5 667799999999999999998753 358999999999999999999999 99999999999999997765
Q ss_pred ---CeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhh
Q 003199 675 ---PKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIY 751 (840)
Q Consensus 675 ---~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~ 751 (840)
+||+|||++..... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||.... ....
T Consensus 160 ~~~vKL~DFG~a~~~~~----~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~ 231 (676)
T 3qa8_A 160 RLIHKIIDLGYAKELDQ----GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQ 231 (676)
T ss_dssp SCEEEECSCCCCCBTTS----CCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHH
T ss_pred ceeEEEccccccccccc----ccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhh
Confidence 89999999987643 222345679999999999999999999999999999999999999996421 1111
Q ss_pred hhhhhhcccc---chhhh------cccc---cCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 003199 752 WVSIKVDTKE---GIMEV------LDKK---LSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEV 803 (840)
Q Consensus 752 ~~~~~~~~~~---~~~~~------~~~~---~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~ev 803 (840)
|......... ..... .... ...........+.+++.+|+..||++|||+.|+
T Consensus 232 ~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 232 WHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp SSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 1110000000 00000 0000 011122345677888889999999999999773
No 285
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.1e-34 Score=314.91 Aligned_cols=306 Identities=26% Similarity=0.363 Sum_probs=253.4
Q ss_pred ccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCC
Q 003199 64 IFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTEL 143 (840)
Q Consensus 64 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L 143 (840)
+..+++|+.|++++|.+.. ++ .+..+++|++|+|++|.+++ ++. +..+++|++|++++|. + ..+ ..+..+++|
T Consensus 40 ~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~-i-~~~-~~~~~l~~L 112 (347)
T 4fmz_A 40 QEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNK-I-TDI-SALQNLTNL 112 (347)
T ss_dssp HHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSC-C-CCC-GGGTTCTTC
T ss_pred chhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCc-c-cCc-hHHcCCCcC
Confidence 4567777777777777763 33 37778888888888888884 343 8888888888888886 2 233 368899999
Q ss_pred CeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccc
Q 003199 144 TDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSEN 223 (840)
Q Consensus 144 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 223 (840)
++|++++|.+++. +. +..+++|++|++++|...... ..+..+++|++|++++|.+....+ +..+++|+.|++++|
T Consensus 113 ~~L~l~~n~i~~~-~~-~~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n 187 (347)
T 4fmz_A 113 RELYLNEDNISDI-SP-LANLTKMYSLNLGANHNLSDL-SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYN 187 (347)
T ss_dssp SEEECTTSCCCCC-GG-GTTCTTCCEEECTTCTTCCCC-GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTS
T ss_pred CEEECcCCcccCc-hh-hccCCceeEEECCCCCCcccc-cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCC
Confidence 9999999999854 33 889999999999999665443 448999999999999999985543 888999999999999
Q ss_pred cccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCc
Q 003199 224 KLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIAN 303 (840)
Q Consensus 224 ~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 303 (840)
.+.+ ++. +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+
T Consensus 188 ~l~~-------------------------~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~- 238 (347)
T 4fmz_A 188 QIED-------------------------ISP-LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP- 238 (347)
T ss_dssp CCCC-------------------------CGG-GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-
T ss_pred cccc-------------------------ccc-ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-
Confidence 8873 222 6778899999999999985443 8889999999999999997655
Q ss_pred ccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCC
Q 003199 304 TVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSL 383 (840)
Q Consensus 304 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 383 (840)
+..+++|++|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|++++..|..+..+++|
T Consensus 239 -~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L 313 (347)
T 4fmz_A 239 -LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL 313 (347)
T ss_dssp -GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC
T ss_pred -hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccC
Confidence 88999999999999999864 4688999999999999999964 458899999999999999999999999999999
Q ss_pred CEEECcCccccccCCchhhcc-CCCeEEccCCCCc
Q 003199 384 NVLDLSNNLLTGYIPESLCEL-LPNSINFSNNRLS 417 (840)
Q Consensus 384 ~~L~l~~N~l~~~~p~~~~~~-~~~~l~l~~N~l~ 417 (840)
++|+|++|++++..| +..+ .++.|++++|+++
T Consensus 314 ~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred CEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999997766 5555 5789999999885
No 286
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=6e-35 Score=306.67 Aligned_cols=239 Identities=12% Similarity=0.044 Sum_probs=182.5
Q ss_pred HhcCccCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecC
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSL 604 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 604 (840)
.+|...+.||+|+||.||+|... +|+.||||++...... .....+.+.+|+.++++++||||+++++++.+.
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~-------~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~ 103 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVL-------PDDVLQETLSRTLRLSRIDKPGVARVLDVVHTR 103 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCS-------CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECccccc-------CHHHHHHHHHHHHHHhcCCCCCcceeeEEEEEC
Confidence 46888899999999999999665 6899999998543321 133457789999999999999999999999999
Q ss_pred ccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 605 YCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
+..++||||+++++|.+++..+ ....++..++.|++.||+|||+ ++|+||||||+||+++.++.+||+++|
T Consensus 104 ~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~--- 174 (286)
T 3uqc_A 104 AGGLVVAEWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA--- 174 (286)
T ss_dssp TEEEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC---
T ss_pred CcEEEEEEecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc---
Confidence 9999999999999999999653 3556788999999999999999 999999999999999999999998543
Q ss_pred hhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchh
Q 003199 685 VLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIM 764 (840)
Q Consensus 685 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 764 (840)
|++| ++.++|||||||++|||++|+.||.+............ ........
T Consensus 175 --------------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~--~~~~~~~~- 224 (286)
T 3uqc_A 175 --------------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAER--DTAGQPIE- 224 (286)
T ss_dssp --------------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCB--CTTSCBCC-
T ss_pred --------------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHH--HhccCCCC-
Confidence 3333 68899999999999999999999986422110000000 00000000
Q ss_pred hhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhhcCCCCCCC
Q 003199 765 EVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLAEADPCRFES 817 (840)
Q Consensus 765 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~~~~~~~~~~ 817 (840)
...... .....+.+++.+||+.||++| |+.|+++.|+++.......
T Consensus 225 ---~~~~~~---~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~~~ 270 (286)
T 3uqc_A 225 ---PADIDR---DIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVADRT 270 (286)
T ss_dssp ---HHHHCT---TSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-----
T ss_pred ---hhhccc---CCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCCcc
Confidence 000111 123456778889999999999 9999999999877655433
No 287
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.1e-33 Score=302.52 Aligned_cols=288 Identities=21% Similarity=0.274 Sum_probs=188.1
Q ss_pred cccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeec
Q 003199 69 KLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDM 148 (840)
Q Consensus 69 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L 148 (840)
+|+.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|..+++|++|+|++|+ +.+..|..|.++++|++|+|
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L 109 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNK-ISKIHEKAFSPLRKLQKLYI 109 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC-CCEECGGGSTTCTTCCEEEC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCc-cCccCHhHhhCcCCCCEEEC
Confidence 3445555555554 3343332 455666666666655545556666666666666554 33444555666666666666
Q ss_pred cCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCc--ccCCcCCCCCCCcceecccccccc
Q 003199 149 SVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLT--GEVPQDLGQWSPLVVLDLSENKLS 226 (840)
Q Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~--~~~~~~l~~l~~L~~L~L~~N~l~ 226 (840)
++|+++ .+|..+. ++|++|++++|+++...+..|.++++|++|++++|+++ +..+..+..+ +|+.|++++|+++
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~ 185 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLT 185 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCS
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCC
Confidence 666666 3333333 56677777777766666666667777777777777764 2555666666 7777777777776
Q ss_pred ccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccC
Q 003199 227 GPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVG 306 (840)
Q Consensus 227 ~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 306 (840)
+ +|..+. ++|++|++++|++++..+..+..+++|+.|++++|++++..+..+.
T Consensus 186 ~-------------------------l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 238 (332)
T 2ft3_A 186 G-------------------------IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLS 238 (332)
T ss_dssp S-------------------------CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGG
T ss_pred c-------------------------cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhh
Confidence 3 122221 4666777777777766666777777777777777777777777777
Q ss_pred CCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccC------ccccchhcccCCccC--CCcchhcc
Q 003199 307 NARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGN------LKKLNLLMLQSNKLN--SSIPNSLS 378 (840)
Q Consensus 307 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~--~~~~~~~~ 378 (840)
.+++|++|+|++|+++ .+|..+..+++|+.|++++|++++..+..|.. ...|+.|++++|++. +..|.+|.
T Consensus 239 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~ 317 (332)
T 2ft3_A 239 FLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFR 317 (332)
T ss_dssp GCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGT
T ss_pred CCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCccccc
Confidence 7788888888888887 66777778888888888888888666666654 356888888888887 57778888
Q ss_pred cccCCCEEECcCcc
Q 003199 379 SLKSLNVLDLSNNL 392 (840)
Q Consensus 379 ~l~~L~~L~l~~N~ 392 (840)
.+++|+.|++++|+
T Consensus 318 ~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 318 CVTDRLAIQFGNYK 331 (332)
T ss_dssp TBCCSTTEEC----
T ss_pred ccchhhhhhccccc
Confidence 88999999988874
No 288
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.1e-35 Score=343.04 Aligned_cols=238 Identities=22% Similarity=0.296 Sum_probs=189.1
Q ss_pred HhcCccCeeeccCCcEEEEEEeC--CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEec
Q 003199 526 EAMTEKNKVGQGGSGTVYKIDLN--SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSS 603 (840)
Q Consensus 526 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 603 (840)
.+|...+.||+|+||+||+|... +|+.||||++.... .......+.+|++++++++||||+++++++..
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~---------~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 150 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG---------DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEH 150 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC---------CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC---------CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEee
Confidence 57888999999999999999764 68999999885322 12345678899999999999999999999987
Q ss_pred Ccc-----ceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeee
Q 003199 604 LYC-----NLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVA 678 (840)
Q Consensus 604 ~~~-----~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~ 678 (840)
... .++||||+++++|.+++.. .++|.++..++.||+.||+|||+ ++||||||||+|||++.+ .+||+
T Consensus 151 ~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~ 223 (681)
T 2pzi_A 151 TDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLI 223 (681)
T ss_dssp ECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEEC
T ss_pred cCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEE
Confidence 665 6999999999999988765 68999999999999999999999 999999999999999986 89999
Q ss_pred cccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhc
Q 003199 679 DFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVD 758 (840)
Q Consensus 679 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 758 (840)
|||+++..... ....||+.|+|||++.+. ++.++|||||||++|||++|..||.......
T Consensus 224 DFG~a~~~~~~-------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~------------ 283 (681)
T 2pzi_A 224 DLGAVSRINSF-------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG------------ 283 (681)
T ss_dssp CCTTCEETTCC-------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS------------
T ss_pred ecccchhcccC-------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc------------
Confidence 99999765321 345799999999988765 4899999999999999999998876421100
Q ss_pred cccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHhhh
Q 003199 759 TKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPT-MNEVVQLLAE 809 (840)
Q Consensus 759 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps-~~evl~~L~~ 809 (840)
. . ...........+.+++.+|++.||++||+ ++++.+.+..
T Consensus 284 ----~----~--~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 284 ----L----P--EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ----C----C--TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ----c----c--ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0 0 00001122356778899999999999995 5555555543
No 289
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.7e-35 Score=326.25 Aligned_cols=241 Identities=18% Similarity=0.151 Sum_probs=175.4
Q ss_pred hcCccCeeeccCCcEEEEEE-eCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCC-CCcceee------
Q 003199 527 AMTEKNKVGQGGSGTVYKID-LNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRH-KNIVKLY------ 598 (840)
Q Consensus 527 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~------ 598 (840)
.|...+.||+|+||+||+|. ..+|+.||||++...... .....+.+.+|+.+++.+.| +|...+.
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~-------~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~ 151 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-------PSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFI 151 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----------CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBC
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCc-------cHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccc
Confidence 35567789999999999996 557999999998533211 12234668899999999987 3221111
Q ss_pred ---------------eEEec-----CccceEEEeecCCCChHHHhh------cCCCCCChHHHHHHHHHHHHHHHHHhhc
Q 003199 599 ---------------CYFSS-----LYCNLLVYEYMPNGNLWDALH------KGLVHLDWPTRHKIAFGVAQGLAYLHHG 652 (840)
Q Consensus 599 ---------------~~~~~-----~~~~~lV~e~~~~gsL~~~l~------~~~~~~~~~~~~~i~~~i~~~l~~LH~~ 652 (840)
.++.. ....+++|+++ +++|.+++. .....+++..+..++.|+++||+|||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~- 229 (413)
T 3dzo_A 152 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH- 229 (413)
T ss_dssp CCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred cchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh-
Confidence 11111 12345666665 789999884 223357888999999999999999999
Q ss_pred CCCCeEecCCCCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCcccc----------ccCCCCccccc
Q 003199 653 LLSPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYA----------YSSKATTKCDV 722 (840)
Q Consensus 653 ~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv 722 (840)
++||||||||+|||++.++.+||+|||+++.... ......| +.|+|||++ .+..++.++||
T Consensus 230 --~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dv 300 (413)
T 3dzo_A 230 --YGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDT 300 (413)
T ss_dssp --TTEECSCCCGGGEEECTTCCEEECCGGGCEETTE------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHH
T ss_pred --CCcccCCcccceEEEecCCeEEEEeccceeecCC------ccccCCC-CceeCchhhhccccccccccCcCCCchhhH
Confidence 9999999999999999999999999999876532 2344567 999999998 55568899999
Q ss_pred hhHHHHHHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 003199 723 YSFGVVLMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNE 802 (840)
Q Consensus 723 ~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~e 802 (840)
|||||++|||++|+.||........ ........ .. ....+.+++.+||+.||++||++.+
T Consensus 301 wSlGvil~elltg~~Pf~~~~~~~~---------------~~~~~~~~--~~---~~~~~~~li~~~l~~dP~~Rpt~~~ 360 (413)
T 3dzo_A 301 WTLGLAIYWIWCADLPNTDDAALGG---------------SEWIFRSC--KN---IPQPVRALLEGFLRYPKEDRLLPLQ 360 (413)
T ss_dssp HHHHHHHHHHHHSSCCCCTTGGGSC---------------SGGGGSSC--CC---CCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHHHHHHHHHHHCCCCCCCcchhhh---------------HHHHHhhc--cc---CCHHHHHHHHHHccCChhhCcCHHH
Confidence 9999999999999999975321100 01111100 11 1245777888999999999999777
Q ss_pred HHH
Q 003199 803 VVQ 805 (840)
Q Consensus 803 vl~ 805 (840)
+++
T Consensus 361 ~l~ 363 (413)
T 3dzo_A 361 AME 363 (413)
T ss_dssp HTT
T ss_pred HHh
Confidence 654
No 290
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.5e-34 Score=306.70 Aligned_cols=230 Identities=23% Similarity=0.309 Sum_probs=177.2
Q ss_pred HHHhcCcc-CeeeccCCcEEEEEEe-CCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHH-hccCCCCcceeeeE
Q 003199 524 ILEAMTEK-NKVGQGGSGTVYKIDL-NSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETL-GNIRHKNIVKLYCY 600 (840)
Q Consensus 524 ~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~ 600 (840)
+..+|... +.||+|+||.||+|.. .+++.||||++.. ...+.+|++++ +...||||++++++
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---------------~~~~~~e~~~~~~~~~h~~i~~~~~~ 79 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD---------------CPKARREVELHWRASQCPHIVRIVDV 79 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC---------------SHHHHHHHHHHHHHTTSTTBCCEEEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc---------------cHHHHHHHHHHHHhccCCCchhHHhh
Confidence 34566666 6799999999999965 5789999999832 12456788887 55589999999999
Q ss_pred Eec----CccceEEEeecCCCChHHHhhcCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcC---C
Q 003199 601 FSS----LYCNLLVYEYMPNGNLWDALHKGL-VHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDV---N 672 (840)
Q Consensus 601 ~~~----~~~~~lV~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~---~ 672 (840)
+.. ....++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ .+|+||||||+||+++. +
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~ 156 (299)
T 3m2w_A 80 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPN 156 (299)
T ss_dssp EEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTT
T ss_pred hhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCC
Confidence 876 677899999999999999998753 368999999999999999999999 99999999999999998 7
Q ss_pred CCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCCCCCCCcchhhh
Q 003199 673 YQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVEDDFGDNKNIIYW 752 (840)
Q Consensus 673 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~ 752 (840)
+.+||+|||++.... +..++.++|||||||++|||++|+.||...........
T Consensus 157 ~~~kl~Dfg~a~~~~-------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~-- 209 (299)
T 3m2w_A 157 AILKLTDFGFAKETT-------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-- 209 (299)
T ss_dssp CCEEECCCTTCEECT-------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CC--
T ss_pred CcEEEeccccccccc-------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHH--
Confidence 889999999985431 23467899999999999999999999975322110000
Q ss_pred hhhhhccccchhhhcccccCCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 753 VSIKVDTKEGIMEVLDKKLSGSF----RDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
............. ......+.+++.+|++.||++|||+.|++++-.
T Consensus 210 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~ 259 (299)
T 3m2w_A 210 ----------MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPW 259 (299)
T ss_dssp ----------SCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHH
T ss_pred ----------HHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChh
Confidence 0000000000000 122456778888999999999999999998743
No 291
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=7.2e-33 Score=298.12 Aligned_cols=289 Identities=20% Similarity=0.281 Sum_probs=165.5
Q ss_pred cccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeec
Q 003199 69 KLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDM 148 (840)
Q Consensus 69 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L 148 (840)
+|+.++++++.++ .+|..+. ++|++|+|++|.|++..+..|..+++|++|+|++|+ +.+..|..|..+++|++|+|
T Consensus 32 ~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 32 HLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNK-ISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp ETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC-CCCBCTTTTTTCTTCCEEEC
T ss_pred CCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCc-CCeeCHHHhcCCCCCCEEEC
Confidence 4455555555554 3343332 355566666666654444455556666666665554 33334555566666666666
Q ss_pred cCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcc--cCCcCCCCCCCcceecccccccc
Q 003199 149 SVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTG--EVPQDLGQWSPLVVLDLSENKLS 226 (840)
Q Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~l~~l~~L~~L~L~~N~l~ 226 (840)
++|+++ .+|..+. ++|++|++++|.+++..+..|.++++|++|++++|++.. ..+..+..+++|+.|++++|.++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 666665 3333332 566666666666666555566666666666666666642 44555566666666666666655
Q ss_pred ccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccC
Q 003199 227 GPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVG 306 (840)
Q Consensus 227 ~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 306 (840)
.. |..+. ++|++|++++|++++..|..+..+++|+.|++++|++++..+..+.
T Consensus 185 ~l-------------------------~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 237 (330)
T 1xku_A 185 TI-------------------------PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLA 237 (330)
T ss_dssp SC-------------------------CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGG
T ss_pred cC-------------------------Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhcc
Confidence 21 11111 4555566666666555555566666666666666666655555566
Q ss_pred CCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccC------ccccchhcccCCccCC--Ccchhcc
Q 003199 307 NARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGN------LKKLNLLMLQSNKLNS--SIPNSLS 378 (840)
Q Consensus 307 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~Ls~N~l~~--~~~~~~~ 378 (840)
.+++|++|+|++|+++ .+|..+..+++|+.|+|++|+|++..+..|.. ...|+.|++++|++.. ..|..|.
T Consensus 238 ~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~ 316 (330)
T 1xku_A 238 NTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFR 316 (330)
T ss_dssp GSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGT
T ss_pred CCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccc
Confidence 6666666666666666 55556666666666666666666555555532 2566677777777653 4566777
Q ss_pred cccCCCEEECcCcc
Q 003199 379 SLKSLNVLDLSNNL 392 (840)
Q Consensus 379 ~l~~L~~L~l~~N~ 392 (840)
.+.+++.++|++|+
T Consensus 317 ~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 317 CVYVRAAVQLGNYK 330 (330)
T ss_dssp TCCCGGGEEC----
T ss_pred cccceeEEEecccC
Confidence 77777777777764
No 292
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=9.8e-33 Score=297.25 Aligned_cols=294 Identities=19% Similarity=0.210 Sum_probs=212.7
Q ss_pred CCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCee
Q 003199 42 NLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQL 121 (840)
Q Consensus 42 ~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L 121 (840)
+|+.+++++| .+..+|... .++|+.|+|++|.+.+..|..|.++++|++|+|++|++++..|..|..+++|++|
T Consensus 34 ~l~~l~~~~~---~l~~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 107 (332)
T 2ft3_A 34 HLRVVQCSDL---GLKAVPKEI---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKL 107 (332)
T ss_dssp ETTEEECCSS---CCSSCCSCC---CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEE
T ss_pred cCCEEECCCC---CccccCCCC---CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEE
Confidence 5677777777 455565543 2567778888888877777788888888888888888887778888888888888
Q ss_pred ecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeecccccc--ccchhhhcCCCCCEEEccCC
Q 003199 122 ELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSG--EISSVIANSTTLTMLSLYDN 199 (840)
Q Consensus 122 ~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N 199 (840)
+|++|+ ...+|..+. ++|++|++++|.++...+..|..+++|++|++++|.++. ..+..|..+ +|++|++++|
T Consensus 108 ~L~~n~--l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n 182 (332)
T 2ft3_A 108 YISKNH--LVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEA 182 (332)
T ss_dssp ECCSSC--CCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSS
T ss_pred ECCCCc--CCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCC
Confidence 888887 335665554 789999999999987767778889999999999998863 667777777 8999999999
Q ss_pred cCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCc
Q 003199 200 SLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPE 279 (840)
Q Consensus 200 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 279 (840)
++++ +|..+. ++|+.|+|++|++++..+..+..+++|+.|++++|.+.+..+..|..+++|++|++++|+++ .+|.
T Consensus 183 ~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 258 (332)
T 2ft3_A 183 KLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPA 258 (332)
T ss_dssp BCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCT
T ss_pred CCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecCh
Confidence 9985 555443 68899999999988777777777777777777777777766667777777777777777777 6666
Q ss_pred cccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccC--CCCCCcccCcc
Q 003199 280 GILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLS--GPIPSGIGNLK 357 (840)
Q Consensus 280 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~ 357 (840)
.+..+++|+.|++++|++++..+..|....- ......|+.|++++|++. +..|..|..++
T Consensus 259 ~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~------------------~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~ 320 (332)
T 2ft3_A 259 GLPDLKLLQVVYLHTNNITKVGVNDFCPVGF------------------GVKRAYYNGISLFNNPVPYWEVQPATFRCVT 320 (332)
T ss_dssp TGGGCTTCCEEECCSSCCCBCCTTSSSCSSC------------------CSSSCCBSEEECCSSSSCGGGSCGGGGTTBC
T ss_pred hhhcCccCCEEECCCCCCCccChhHcccccc------------------ccccccccceEeecCcccccccCcccccccc
Confidence 6777777777777777777665555543210 001234566666666665 45556666677
Q ss_pred ccchhcccCCc
Q 003199 358 KLNLLMLQSNK 368 (840)
Q Consensus 358 ~L~~L~Ls~N~ 368 (840)
+|+.++|++|+
T Consensus 321 ~L~~l~l~~n~ 331 (332)
T 2ft3_A 321 DRLAIQFGNYK 331 (332)
T ss_dssp CSTTEEC----
T ss_pred hhhhhhccccc
Confidence 77777776664
No 293
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=6e-35 Score=315.24 Aligned_cols=250 Identities=14% Similarity=0.180 Sum_probs=184.2
Q ss_pred HHhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC---------CCCcc
Q 003199 525 LEAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR---------HKNIV 595 (840)
Q Consensus 525 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---------h~niv 595 (840)
.++|+..+.||+|+||+||+|.. +|+.||||++........ ........+.+.+|+.+++.++ ||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~--~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLV--NGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCB--TTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCcccc--ccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 46788899999999999999987 689999999965532210 0011122456778888888875 66666
Q ss_pred eeeeE-----------------Eec-------------CccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHH
Q 003199 596 KLYCY-----------------FSS-------------LYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQG 645 (840)
Q Consensus 596 ~l~~~-----------------~~~-------------~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~ 645 (840)
++.+. +.+ ....++||||+++|++.+.+.+ ..+++..+..++.||+.|
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~a 173 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTAS 173 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHH
Confidence 65554 333 6788999999999987777754 368999999999999999
Q ss_pred HHHHh-hcCCCCeEecCCCCCCEEEcCCC--------------------CCeeecccchhhhhccCCCCcceeccccccc
Q 003199 646 LAYLH-HGLLSPIIHRDIKSTNILLDVNY--------------------QPKVADFGIAKVLQARGGKDSTTTVIAGTYG 704 (840)
Q Consensus 646 l~~LH-~~~~~~ivH~Dlk~~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~ 704 (840)
|+||| + ++||||||||+|||++.++ .+||+|||+|+.... ....||+.
T Consensus 174 L~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~--------~~~~gt~~ 242 (336)
T 2vuw_A 174 LAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD--------GIVVFCDV 242 (336)
T ss_dssp HHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET--------TEEECCCC
T ss_pred HHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC--------CcEEEeec
Confidence 99999 8 8999999999999999887 899999999986532 13479999
Q ss_pred ccCccccccCCCCccccchhHHHH-HHHHHhCCCCCCCCCCCCcchhhhhhhhhccccchhh-hcccc-cCCCcHHHHHH
Q 003199 705 YLAPEYAYSSKATTKCDVYSFGVV-LMELITGRKPVEDDFGDNKNIIYWVSIKVDTKEGIME-VLDKK-LSGSFRDEMIQ 781 (840)
Q Consensus 705 y~aPE~~~~~~~~~~~Dv~slG~i-l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~ 781 (840)
|+|||++.+.. +.++||||+|++ .+++++|..||.. ..|........ ... ..... ..........+
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~--------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN--------VLWLHYLTDKM--LKQMTFKTKCNTPAMKQIKRK 311 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH--------HHHHHHHHHHH--HHTCCCSSCCCSHHHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc--------hhhhhHHHHhh--hhhhccCcccchhhhhhcCHH
Confidence 99999988766 899999998777 7788889999843 11211110000 000 00111 11123456678
Q ss_pred HHHHHHHccCCCCCCCCCHHHHH-HH
Q 003199 782 VLRIAIRCTSKSPATRPTMNEVV-QL 806 (840)
Q Consensus 782 l~~l~~~cl~~dP~~Rps~~evl-~~ 806 (840)
+.+++.+|++.| |++|++ +|
T Consensus 312 ~~dli~~~L~~d-----sa~e~l~~H 332 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLLCQH 332 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHHHHC
T ss_pred HHHHHHHHhccC-----CHHHHHhcC
Confidence 889999999976 999998 64
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.6e-32 Score=293.73 Aligned_cols=275 Identities=22% Similarity=0.228 Sum_probs=170.7
Q ss_pred ccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeee
Q 003199 68 TKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLD 147 (840)
Q Consensus 68 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~ 147 (840)
++|+.|+|++|.+++..+..|+++++|++|+|++|.+++..|..|..+++|++|+|++|+ ...+|..+. ++|++|+
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~--l~~l~~~~~--~~L~~L~ 127 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQ--LKELPEKMP--KTLQELR 127 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSC--CSBCCSSCC--TTCCEEE
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCc--CCccChhhc--ccccEEE
Confidence 345555555555555555556666666666666666665556666666666666666665 224454443 5777777
Q ss_pred ccCCcccccCCccccCCCCCcEEEeecccccc--ccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccc
Q 003199 148 MSVNHLSGKIPESILRLPKLRVLQLYNNSLSG--EISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKL 225 (840)
Q Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l 225 (840)
+++|.+++..+..|.++++|++|++++|.+.. ..+..|.++++|++|++++|+++. +|..+. ++|++|+|++|++
T Consensus 128 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l 204 (330)
T 1xku_A 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKI 204 (330)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCC
T ss_pred CCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcC
Confidence 77777776666667778888888888887753 556777788888888888888874 444433 6788888888887
Q ss_pred cccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCccc
Q 003199 226 SGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTV 305 (840)
Q Consensus 226 ~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 305 (840)
++..+..+..+++|+.|++++|.+.+..+..+..+++|++|++++|+++ .+|..+..+++|+.|++++|++++..+..|
T Consensus 205 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f 283 (330)
T 1xku_A 205 TKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDF 283 (330)
T ss_dssp CEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSS
T ss_pred CccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhc
Confidence 7665555555555555555555555555555666666666666666666 555556666666666666666665555444
Q ss_pred CCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCC--CCCCcccCccccchhcccCCc
Q 003199 306 GNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSG--PIPSGIGNLKKLNLLMLQSNK 368 (840)
Q Consensus 306 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~ 368 (840)
.... .......++.|++++|++.. ..|..|..+++++.++|++|+
T Consensus 284 ~~~~------------------~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 284 CPPG------------------YNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SCSS------------------CCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred CCcc------------------cccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 3220 00112456666666666642 445566777777777777764
No 295
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1e-33 Score=301.50 Aligned_cols=248 Identities=29% Similarity=0.459 Sum_probs=106.6
Q ss_pred CCCeeecccCccccc--cCCcccCCCCCCCeeeccC-CcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCE
Q 003199 117 NLRQLELYYNQQLAG--TIPEELGNLTELTDLDMSV-NHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTM 193 (840)
Q Consensus 117 ~L~~L~L~~n~~~~~--~~p~~l~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 193 (840)
+++.|+|++|. +.+ .+|..+..+++|++|+|++ |.+.+.+|..|..+++|++|+|++|++++..|..|.++++|++
T Consensus 51 ~l~~L~L~~~~-l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 129 (313)
T 1ogq_A 51 RVNNLDLSGLN-LPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVT 129 (313)
T ss_dssp CEEEEEEECCC-CSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCE
T ss_pred eEEEEECCCCC-ccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCE
Confidence 34444444443 222 3444444444444444442 4444444444444444444444444444444444444444444
Q ss_pred EEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCccccccc-CCceEEeeCce
Q 003199 194 LSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCK-NLLRFRVSNNH 272 (840)
Q Consensus 194 L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~l~~N~ 272 (840)
|+|++|++++.+|..+..+++|++|+|++|++++ .+|..+..++ +|++|++++|+
T Consensus 130 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~------------------------~~p~~l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 130 LDFSYNALSGTLPPSISSLPNLVGITFDGNRISG------------------------AIPDSYGSFSKLFTSMTISRNR 185 (313)
T ss_dssp EECCSSEEESCCCGGGGGCTTCCEEECCSSCCEE------------------------ECCGGGGCCCTTCCEEECCSSE
T ss_pred EeCCCCccCCcCChHHhcCCCCCeEECcCCcccC------------------------cCCHHHhhhhhcCcEEECcCCe
Confidence 4444444444444444444444444444444433 3333333333 44444444444
Q ss_pred eeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCc
Q 003199 273 LEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSG 352 (840)
Q Consensus 273 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 352 (840)
+++.+|..+..++ |+.|++++|++++..+..|..+++|+.|+|++|++++..|. +..+++|++|+|++|++++.+|..
T Consensus 186 l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 263 (313)
T 1ogq_A 186 LTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQG 263 (313)
T ss_dssp EEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGG
T ss_pred eeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChH
Confidence 4444444444443 44444444444444444444444444444444444433222 333444444444444444444444
Q ss_pred ccCccccchhcccCCccCCCcchhcccccCCCEEECcCcc
Q 003199 353 IGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNL 392 (840)
Q Consensus 353 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 392 (840)
+..+++|+.|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 264 l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 264 LTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred HhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 444444444444444444444333 334444444444443
No 296
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.6e-33 Score=295.87 Aligned_cols=253 Identities=30% Similarity=0.457 Sum_probs=226.7
Q ss_pred CCCcEEEccCCcccc--cCchhhhcCCCCCeeeccc-CccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCc
Q 003199 92 TSLTDLELTGNFITG--HIPPEIGLLKNLRQLELYY-NQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLR 168 (840)
Q Consensus 92 ~~L~~L~L~~n~i~~--~~p~~~~~l~~L~~L~L~~-n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 168 (840)
.+++.|+|++|.+++ .+|..|..+++|++|+|++ |. +.+.+|..|..+++|++|+|++|.+++..|..|..+++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~-l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINN-LVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETT-EESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCc-ccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 589999999999998 8999999999999999995 75 6778999999999999999999999989999999999999
Q ss_pred EEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCC-CcceeccccccccccCCccccCCCCchhhhcccc
Q 003199 169 VLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWS-PLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQN 247 (840)
Q Consensus 169 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n 247 (840)
+|+|++|.+++..|..|..+++|++|+|++|++++.+|..+..++ +|+.|+|++|++++..|
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~----------------- 191 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIP----------------- 191 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECC-----------------
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCC-----------------
Confidence 999999999999999999999999999999999988999999998 99999999999886544
Q ss_pred cccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccch
Q 003199 248 MFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPS 327 (840)
Q Consensus 248 ~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 327 (840)
..+..++ |+.|++++|.+++..|..+..+++|+.|+|++|++++..+. +..+++|++|+|++|++++.+|.
T Consensus 192 -------~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~ 262 (313)
T 1ogq_A 192 -------PTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQ 262 (313)
T ss_dssp -------GGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCG
T ss_pred -------hHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCCh
Confidence 4455555 88888888888888888888888888888888888866665 77889999999999999989999
Q ss_pred hhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCc-cCCC
Q 003199 328 EIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNK-LNSS 372 (840)
Q Consensus 328 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~ 372 (840)
.+..+++|+.|+|++|++++.+|.. +.+++|+.|++++|+ +.|.
T Consensus 263 ~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 263 GLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp GGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred HHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccCC
Confidence 9999999999999999999888886 889999999999998 5543
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=4.7e-36 Score=339.27 Aligned_cols=380 Identities=19% Similarity=0.191 Sum_probs=235.1
Q ss_pred CCCCEEecCCCcCcccCCcc-ccCCCCCCEEeCCCCCCCccCCCC----cccccccccccEEEecCccccccCCccc-cC
Q 003199 17 QNLRRLDLSNNLFTGQFPLS-VFNLTNLEVLSFNENPGFKLWKLP----ESSIFRLTKLRIMVLATCALHGQIPASI-GN 90 (840)
Q Consensus 17 ~~L~~L~Ls~n~i~~~~p~~-~~~l~~L~~L~L~~N~~~~l~~l~----~~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~ 90 (840)
++|++|||++|.++...... +..+++|++|+|++|. +.... ...+..+++|++|+|++|.+....+..+ ..
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~---l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 79 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCG---LTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQG 79 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSC---CCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHT
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCC---CCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHH
Confidence 56788999999887544333 7778888888888884 33211 2346667888888888888765433332 23
Q ss_pred CC----CCcEEEccCCcccc----cCchhhhcCCCCCeeecccCccccccCCcc-----cCCCCCCCeeeccCCcccccC
Q 003199 91 VT----SLTDLELTGNFITG----HIPPEIGLLKNLRQLELYYNQQLAGTIPEE-----LGNLTELTDLDMSVNHLSGKI 157 (840)
Q Consensus 91 l~----~L~~L~L~~n~i~~----~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~-----l~~l~~L~~L~L~~n~l~~~~ 157 (840)
++ +|++|+|++|.|++ .++..+..+++|++|+|++|. +.+..+.. ....++|++|+|++|.++...
T Consensus 80 l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~-i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 158 (461)
T 1z7x_W 80 LQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL-LGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAAS 158 (461)
T ss_dssp TCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSB-CHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGG
T ss_pred HhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCc-CchHHHHHHHHHHhcCCCcceEEECCCCCCCHHH
Confidence 44 68888888888874 347777788888888888876 33222221 223567888888888877533
Q ss_pred ----CccccCCCCCcEEEeeccccccccchhhhc-----CCCCCEEEccCCcCccc----CCcCCCCCCCcceecccccc
Q 003199 158 ----PESILRLPKLRVLQLYNNSLSGEISSVIAN-----STTLTMLSLYDNSLTGE----VPQDLGQWSPLVVLDLSENK 224 (840)
Q Consensus 158 ----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N~ 224 (840)
+..+..+++|++|++++|.+++..+..+.. .++|++|+|++|.++.. ++..+..+++|+.|+|++|+
T Consensus 159 ~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 238 (461)
T 1z7x_W 159 CEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNK 238 (461)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSB
T ss_pred HHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCc
Confidence 445566778888888888876554444432 56788888888877743 34556667777888888777
Q ss_pred ccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeecc----CCccccCCCcccEEeccCCccccc
Q 003199 225 LSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGS----IPEGILSLPHVSIIDLSYNSFSGP 300 (840)
Q Consensus 225 l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~ 300 (840)
+++.....++ +..+..+++|++|++++|.++.. ++..+..+++|+.|++++|.+++.
T Consensus 239 l~~~~~~~l~-------------------~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 239 LGDVGMAELC-------------------PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp CHHHHHHHHH-------------------HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred CChHHHHHHH-------------------HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH
Confidence 7643211110 11122355666666666666532 344555566666666666666543
Q ss_pred CCcccCC-----CCCCceeecccceeeec----cchhhcccCcccEEEcCCCccCCCCCCcccC-----ccccchhcccC
Q 003199 301 IANTVGN-----ARNLSELFMQRNQISGF----IPSEIYRAISLVKIDLSDNLLSGPIPSGIGN-----LKKLNLLMLQS 366 (840)
Q Consensus 301 ~~~~~~~-----l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~ 366 (840)
.+..+.. .++|++|+|++|.+++. ++..+..+++|+.|+|++|++++..+..+.. .++|+.|+|++
T Consensus 300 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 379 (461)
T 1z7x_W 300 GARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLAD 379 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCC
Confidence 3332222 25677777777776654 3455555667777777777766543433332 45677777777
Q ss_pred CccCC----CcchhcccccCCCEEECcCccccccCCchhhc------cCCCeEEccCCCCcCc
Q 003199 367 NKLNS----SIPNSLSSLKSLNVLDLSNNLLTGYIPESLCE------LLPNSINFSNNRLSGP 419 (840)
Q Consensus 367 N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~------~~~~~l~l~~N~l~~~ 419 (840)
|++++ .+|..+..+++|++|||++|++++.-...+.. ..++.|++.++.+...
T Consensus 380 n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~ 442 (461)
T 1z7x_W 380 CDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEE 442 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHH
T ss_pred CCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHH
Confidence 77764 56666777777777777777776542222221 1345666666665543
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=1.3e-35 Score=335.70 Aligned_cols=356 Identities=18% Similarity=0.164 Sum_probs=251.8
Q ss_pred CCCCEEeCCCCCCCccCCCCcc-cccccccccEEEecCccccc----cCCccccCCCCCcEEEccCCcccccCchhh-hc
Q 003199 41 TNLEVLSFNENPGFKLWKLPES-SIFRLTKLRIMVLATCALHG----QIPASIGNVTSLTDLELTGNFITGHIPPEI-GL 114 (840)
Q Consensus 41 ~~L~~L~L~~N~~~~l~~l~~~-~~~~l~~L~~L~L~~n~l~~----~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~-~~ 114 (840)
++|++|+|++| .+...+.. .+..+++|++|+|++|.+.. .++..+..+++|++|+|++|.+++..+..+ ..
T Consensus 3 ~~l~~L~Ls~~---~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 79 (461)
T 1z7x_W 3 LDIQSLDIQCE---ELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQG 79 (461)
T ss_dssp EEEEEEEEESC---CCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHT
T ss_pred ccceehhhhhc---ccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHH
Confidence 46778888888 44443333 26677888888888888763 345667777888888888888775444333 33
Q ss_pred CC----CCCeeecccCcccc---ccCCcccCCCCCCCeeeccCCcccccCCcccc-----CCCCCcEEEeecccccccc-
Q 003199 115 LK----NLRQLELYYNQQLA---GTIPEELGNLTELTDLDMSVNHLSGKIPESIL-----RLPKLRVLQLYNNSLSGEI- 181 (840)
Q Consensus 115 l~----~L~~L~L~~n~~~~---~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~- 181 (840)
++ +|++|+|++|++.. ..++..+..+++|++|+|++|.++...+..+. ..++|++|+|++|++++..
T Consensus 80 l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~ 159 (461)
T 1z7x_W 80 LQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASC 159 (461)
T ss_dssp TCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGH
T ss_pred HhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHH
Confidence 55 57777777776221 23466677777777777777777643333222 2456777777777776533
Q ss_pred ---chhhhcCCCCCEEEccCCcCcccCCcCCC-----CCCCcceeccccccccccCCccccCCCCchhhhcccccccccC
Q 003199 182 ---SSVIANSTTLTMLSLYDNSLTGEVPQDLG-----QWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVL 253 (840)
Q Consensus 182 ---~~~~~~l~~L~~L~L~~N~l~~~~~~~l~-----~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 253 (840)
+..+..+++|++|+|++|.++...+..+. ..++|++|+|++|.+++.... .+
T Consensus 160 ~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--------------------~l 219 (461)
T 1z7x_W 160 EPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCR--------------------DL 219 (461)
T ss_dssp HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHH--------------------HH
T ss_pred HHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHH--------------------HH
Confidence 44555667777777777776643333332 244666777776666521100 24
Q ss_pred CcccccccCCceEEeeCceeeccC-----CccccCCCcccEEeccCCccccc----CCcccCCCCCCceeecccceeeec
Q 003199 254 PDSLARCKNLLRFRVSNNHLEGSI-----PEGILSLPHVSIIDLSYNSFSGP----IANTVGNARNLSELFMQRNQISGF 324 (840)
Q Consensus 254 ~~~~~~l~~L~~L~l~~N~l~~~~-----~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~ 324 (840)
+..+..+++|++|++++|.+++.. +..+..+++|+.|++++|.+++. ++..+..+++|++|+|++|.+++.
T Consensus 220 ~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~ 299 (461)
T 1z7x_W 220 CGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDE 299 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHH
T ss_pred HHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchH
Confidence 556778899999999999987532 22334689999999999999864 466677799999999999999876
Q ss_pred cchhhccc-----CcccEEEcCCCccCCC----CCCcccCccccchhcccCCccCCCcchhccc-----ccCCCEEECcC
Q 003199 325 IPSEIYRA-----ISLVKIDLSDNLLSGP----IPSGIGNLKKLNLLMLQSNKLNSSIPNSLSS-----LKSLNVLDLSN 390 (840)
Q Consensus 325 ~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-----l~~L~~L~l~~ 390 (840)
.+..+... ++|+.|+|++|.+++. ++..+..+++|+.|+|++|++++..+..+.. .++|++|+|++
T Consensus 300 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~ 379 (461)
T 1z7x_W 300 GARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLAD 379 (461)
T ss_dssp HHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCC
Confidence 66555543 6999999999999865 4566777899999999999998766665543 67999999999
Q ss_pred ccccc----cCCchhhcc-CCCeEEccCCCCcCc
Q 003199 391 NLLTG----YIPESLCEL-LPNSINFSNNRLSGP 419 (840)
Q Consensus 391 N~l~~----~~p~~~~~~-~~~~l~l~~N~l~~~ 419 (840)
|.+++ .+|..+... .++.|++++|++++.
T Consensus 380 n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 380 CDVSDSSCSSLAATLLANHSLRELDLSNNCLGDA 413 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHH
T ss_pred CCCChhhHHHHHHHHHhCCCccEEECCCCCCCHH
Confidence 99996 778877766 578999999999864
No 299
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3.2e-30 Score=274.37 Aligned_cols=259 Identities=20% Similarity=0.203 Sum_probs=138.0
Q ss_pred CCCeeeccCCcccccCCccccCCCCCcEEEeecccccccc--chhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceec
Q 003199 142 ELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEI--SSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLD 219 (840)
Q Consensus 142 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 219 (840)
+|++|+|++|+++.+.+..|.++++|++|+|++|.++... +..+..+++|++|+|++|.++ .++..+..+++|++|+
T Consensus 29 ~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~ 107 (306)
T 2z66_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLD 107 (306)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEE
T ss_pred CCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEE
Confidence 4555555555555333333455555555555555554221 344445555555555555555 2334455555555555
Q ss_pred cccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccc
Q 003199 220 LSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSG 299 (840)
Q Consensus 220 L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 299 (840)
+++|++++..+ ...+..+++|++|++++|.+.+..+..+..+++|+.|++++|.+++
T Consensus 108 l~~n~l~~~~~-----------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 108 FQHSNLKQMSE-----------------------FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CTTSEEESSTT-----------------------TTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCCccccccc-----------------------chhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 55555543221 0234444455555555555554445555555555555555555554
Q ss_pred -cCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcc
Q 003199 300 -PIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLS 378 (840)
Q Consensus 300 -~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 378 (840)
..+..+..+++|++|+|++|++++..|..+..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..|..+.
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 244 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC
T ss_pred ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH
Confidence 3455555566666666666666655555666666666666666666655555566666666666666666666666666
Q ss_pred ccc-CCCEEECcCccccccCCc-hhhcc--CCCeEEccCCCCcCcCCccc
Q 003199 379 SLK-SLNVLDLSNNLLTGYIPE-SLCEL--LPNSINFSNNRLSGPIPLSL 424 (840)
Q Consensus 379 ~l~-~L~~L~l~~N~l~~~~p~-~~~~~--~~~~l~l~~N~l~~~~p~~~ 424 (840)
.++ +|++|+|++|++++..+. ++..+ ....+.+..+.+.|..|..+
T Consensus 245 ~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~ 294 (306)
T 2z66_A 245 HFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDK 294 (306)
T ss_dssp CCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGG
T ss_pred hhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhh
Confidence 663 677777777777654321 11111 11233445556666666543
No 300
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=9.3e-31 Score=284.38 Aligned_cols=280 Identities=18% Similarity=0.172 Sum_probs=164.5
Q ss_pred CCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEE
Q 003199 91 VTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVL 170 (840)
Q Consensus 91 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 170 (840)
++.....++++|.++ .+|..+. ++|++|++++|+ +.+..+..|.++++|++|+|++|++++..+..|.++++|++|
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~-i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNR-ITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSC-CCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCc-CcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 445556788888888 5665543 478888888876 444444467778888888888888877667777778888888
Q ss_pred EeeccccccccchhhhcCCCCCEEEccCCcCcccCC-cCCCCCCCcceeccccc-cccccCCccccCCCCchhhhccccc
Q 003199 171 QLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVP-QDLGQWSPLVVLDLSEN-KLSGPLPAKVCSRGKLQYFLVLQNM 248 (840)
Q Consensus 171 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~l~~n~ 248 (840)
+|++|++++..+..|.++++|++|+|++|+++...+ ..+..+++|++|++++| .+++..+.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~----------------- 168 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRK----------------- 168 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTT-----------------
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHH-----------------
Confidence 888888876666667777888888888887774433 36777777777777777 35433333
Q ss_pred ccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchh
Q 003199 249 FSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSE 328 (840)
Q Consensus 249 ~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~ 328 (840)
.|..+++|++|++++|++++..|..+..+++|++|++++|+++......+..+++|+.|++++|++++..+..
T Consensus 169 -------~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~ 241 (353)
T 2z80_A 169 -------DFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSE 241 (353)
T ss_dssp -------TTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-
T ss_pred -------HccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccc
Confidence 3444444555555555554444444555555555555555544333333333444555555555444332222
Q ss_pred hc---ccCcccEEEcCCCccCC----CCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCC
Q 003199 329 IY---RAISLVKIDLSDNLLSG----PIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 329 ~~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 398 (840)
+. ....++.++|++|.+++ .+|..+..+++|+.|+|++|+++...+..|..+++|++|+|++|++++..|
T Consensus 242 l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 242 LSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp -----CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 21 12334445555554443 244445555566666666666653333334566666666666666665444
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=4.5e-30 Score=278.93 Aligned_cols=205 Identities=18% Similarity=0.172 Sum_probs=123.8
Q ss_pred CCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCC
Q 003199 15 PMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSL 94 (840)
Q Consensus 15 ~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 94 (840)
.++.....++++|.++ .+|..+. ++|++|+|++| .+..++...|..+++|++|+|++|.+++..|..|+++++|
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n---~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 102 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNN---RITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSL 102 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTS---CCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CCCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCC---cCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCC
Confidence 4455566777777777 5665554 46777777777 5556666667777777777777777776666667777777
Q ss_pred cEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCc--ccCCCCCCCeeeccCC-cccccCCccccCCCCCcEEE
Q 003199 95 TDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPE--ELGNLTELTDLDMSVN-HLSGKIPESILRLPKLRVLQ 171 (840)
Q Consensus 95 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~--~l~~l~~L~~L~L~~n-~l~~~~~~~~~~l~~L~~L~ 171 (840)
++|+|++|++++..+..|..+++|++|+|++|+ ...+|. .+..+++|++|++++| .++...+..|.++++|++|+
T Consensus 103 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~--l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~ 180 (353)
T 2z80_A 103 EHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNP--YKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELE 180 (353)
T ss_dssp CEEECCSSCCSSCCHHHHTTCTTCSEEECTTCC--CSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred CEEECCCCcCCcCCHhHhCCCccCCEEECCCCC--CcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEE
Confidence 777777777764444446666666666666665 223333 4556666666666665 35544455555566666666
Q ss_pred eeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccc
Q 003199 172 LYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSG 227 (840)
Q Consensus 172 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 227 (840)
+++|++++..+..|..+++|++|++++|+++......+..+++|+.|+|++|++++
T Consensus 181 l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 181 IDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDT 236 (353)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTT
T ss_pred CCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccc
Confidence 66666655555555555556666665555543222223334555555555555553
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3.3e-29 Score=266.49 Aligned_cols=247 Identities=23% Similarity=0.266 Sum_probs=117.3
Q ss_pred CEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcccccc--CCccccCCCCCcEE
Q 003199 20 RRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQ--IPASIGNVTSLTDL 97 (840)
Q Consensus 20 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L 97 (840)
+.++++++.++ .+|..+. ++|++|+|++| .+..++...|..+++|++|+|++|.+... .+..+..+++|++|
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n---~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 83 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESN---KLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYL 83 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSS---CCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEE
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCC---ccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEE
Confidence 46777777776 5555443 46677777766 45555555555555555555555555422 13344445555555
Q ss_pred EccCCcccccCchhhhcCCCCCeeecccCccccccCC-cccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccc
Q 003199 98 ELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIP-EELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNS 176 (840)
Q Consensus 98 ~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 176 (840)
+|++|.++ .+|..+..+++|++|++++|+ +.+..+ ..+..+++|++|++++|.+++..+..|..+++|++|++++|.
T Consensus 84 ~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 84 DLSFNGVI-TMSSNFLGLEQLEHLDFQHSN-LKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp ECCSCSEE-EEEEEEETCTTCCEEECTTSE-EESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred ECCCCccc-cChhhcCCCCCCCEEECCCCc-ccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 55555555 334444445555555555444 111111 234444444444444444444444444444444444444444
Q ss_pred ccc-ccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCc
Q 003199 177 LSG-EISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPD 255 (840)
Q Consensus 177 l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 255 (840)
+++ ..+..+..+++|++|+|++|++++..+..|..+++|+.|+|++|++++ ..+.
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~------------------------~~~~ 217 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFS------------------------LDTF 217 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSB------------------------CCSG
T ss_pred cccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCc------------------------cChh
Confidence 443 233344444444444444444443334444444444444444444432 2222
Q ss_pred ccccccCCceEEeeCceeeccCCccccCCC-cccEEeccCCccc
Q 003199 256 SLARCKNLLRFRVSNNHLEGSIPEGILSLP-HVSIIDLSYNSFS 298 (840)
Q Consensus 256 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 298 (840)
.+..+++|++|++++|++++..|..+..++ +|+.|+|++|.++
T Consensus 218 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~ 261 (306)
T 2z66_A 218 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 261 (306)
T ss_dssp GGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEE
T ss_pred hccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCee
Confidence 344444455555555555444444444442 4444444444444
No 303
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.3e-28 Score=276.89 Aligned_cols=252 Identities=21% Similarity=0.198 Sum_probs=189.3
Q ss_pred CCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEc
Q 003199 117 NLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSL 196 (840)
Q Consensus 117 ~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 196 (840)
....++.+++. ...+|..+. ++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.+..|.++++|++|+|
T Consensus 55 ~~~~v~c~~~~--l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 55 QFSKVVCTRRG--LSEVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSCEEECCSSC--CSSCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEECCCC--cCccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 34566666554 344555443 46777777777777666667777777777777777777666667777777777777
Q ss_pred cCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeC-ceeec
Q 003199 197 YDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSN-NHLEG 275 (840)
Q Consensus 197 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~-N~l~~ 275 (840)
++|+++.+.+..|..+++|++|+|++|+++. ..+..|..+++|++|++++ |.+..
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~------------------------~~~~~~~~l~~L~~L~l~~~~~l~~ 186 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIES------------------------IPSYAFNRVPSLMRLDLGELKKLEY 186 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCE------------------------ECTTTTTTCTTCCEEECCCCTTCCE
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcce------------------------eCHhHHhcCCcccEEeCCCCCCccc
Confidence 7777776555566667777777777776663 3444566777777777777 45554
Q ss_pred cCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccC
Q 003199 276 SIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGN 355 (840)
Q Consensus 276 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 355 (840)
..+..|..+++|+.|+|++|++++. + .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|..
T Consensus 187 i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 264 (452)
T 3zyi_A 187 ISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDG 264 (452)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred cChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcC
Confidence 4445677788888888888888764 2 4778888999999999998888888999999999999999999888888999
Q ss_pred ccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCC
Q 003199 356 LKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 356 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 398 (840)
+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+...
T Consensus 265 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 265 LASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 9999999999999998888888999999999999999986543
No 304
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=275.39 Aligned_cols=251 Identities=19% Similarity=0.195 Sum_probs=189.2
Q ss_pred CCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEc
Q 003199 117 NLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSL 196 (840)
Q Consensus 117 ~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 196 (840)
..+.++.+++. ...+|..+. ++++.|+|++|+++.+.+..|.++++|++|+|++|.|+++.+..|.++++|++|+|
T Consensus 44 ~~~~v~c~~~~--l~~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 44 QFSKVICVRKN--LREVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TSCEEECCSCC--CSSCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCEEEeCCCC--cCcCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 45667777665 445666553 57788888888888777777788888888888888887777777888888888888
Q ss_pred cCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeC-ceeec
Q 003199 197 YDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSN-NHLEG 275 (840)
Q Consensus 197 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~-N~l~~ 275 (840)
++|+++.+.+..|..+++|++|+|++|+++... +..|..+++|++|++++ |.+..
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~------------------------~~~~~~l~~L~~L~l~~~~~l~~ 175 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIP------------------------SYAFNRIPSLRRLDLGELKRLSY 175 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEEC------------------------TTTTTTCTTCCEEECCCCTTCCE
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccC------------------------HHHhhhCcccCEeCCCCCCCcce
Confidence 888887666667777778888888877776433 34556666677777766 34443
Q ss_pred cCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccC
Q 003199 276 SIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGN 355 (840)
Q Consensus 276 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 355 (840)
..+..|..+++|+.|+|++|+++.. | .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+..|.+
T Consensus 176 i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 253 (440)
T 3zyj_A 176 ISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDN 253 (440)
T ss_dssp ECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTT
T ss_pred eCcchhhcccccCeecCCCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcC
Confidence 3444666777777777777777743 2 3677788888888888888777888888888888888888888877888888
Q ss_pred ccccchhcccCCccCCCcchhcccccCCCEEECcCccccccC
Q 003199 356 LKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYI 397 (840)
Q Consensus 356 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 397 (840)
+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..
T Consensus 254 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 254 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred CCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 888888888888888777778888889999999999887543
No 305
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=9.2e-29 Score=260.07 Aligned_cols=256 Identities=21% Similarity=0.212 Sum_probs=204.7
Q ss_pred CCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceecccc
Q 003199 143 LTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSE 222 (840)
Q Consensus 143 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~ 222 (840)
-++++.+++.++ .+|..+ .++|++|+|++|.+++..+..|..+++|++|+|++|+++++.+..|..+++|++|+|++
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 367888888888 455443 46788888888888877777788888888888888888877777888888888888888
Q ss_pred cc-ccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccC
Q 003199 223 NK-LSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPI 301 (840)
Q Consensus 223 N~-l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 301 (840)
|+ ++. ..+..|..+++|++|++++|.+++..|..+..+++|++|++++|++++..
T Consensus 90 n~~l~~------------------------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (285)
T 1ozn_A 90 NAQLRS------------------------VDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP 145 (285)
T ss_dssp CTTCCC------------------------CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCCccc------------------------cCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccC
Confidence 86 653 33556777788888888888888777778888888888888888888877
Q ss_pred CcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhccccc
Q 003199 302 ANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLK 381 (840)
Q Consensus 302 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 381 (840)
+..|+.+++|++|+|++|++++..+..+..+++|+.|+|++|++++..|..|+.+++|+.|+|++|++++..+..+..++
T Consensus 146 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 225 (285)
T 1ozn_A 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred HhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCc
Confidence 77888899999999999999877777788899999999999999988889999999999999999999987778899999
Q ss_pred CCCEEECcCccccccCCchhhccCCCeEEccCCCCcCcCCcccc
Q 003199 382 SLNVLDLSNNLLTGYIPESLCELLPNSINFSNNRLSGPIPLSLI 425 (840)
Q Consensus 382 ~L~~L~l~~N~l~~~~p~~~~~~~~~~l~l~~N~l~~~~p~~~~ 425 (840)
+|+.|+|++|++++..+.....-.++.+..+.|.+.|..|..+.
T Consensus 226 ~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~~l~ 269 (285)
T 1ozn_A 226 ALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQRLA 269 (285)
T ss_dssp TCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESGGGT
T ss_pred ccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCchHhC
Confidence 99999999999997655421111223445667777777776543
No 306
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1e-28 Score=259.68 Aligned_cols=254 Identities=18% Similarity=0.141 Sum_probs=139.0
Q ss_pred cEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeec
Q 003199 95 TDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYN 174 (840)
Q Consensus 95 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 174 (840)
+.++++++.++ .+|..+ .++|++|+|++|+ +.+..+..|..+++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~-i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNR-ISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSC-CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCc-CCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 56666666666 444332 3466666666665 3333334555666666666666666655555566666666666666
Q ss_pred cc-cccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccC
Q 003199 175 NS-LSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVL 253 (840)
Q Consensus 175 N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 253 (840)
|. +....+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++ ..
T Consensus 90 n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~------------------------~~ 145 (285)
T 1ozn_A 90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA------------------------LP 145 (285)
T ss_dssp CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC------------------------CC
T ss_pred CCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccc------------------------cC
Confidence 64 554445555555666666666666555545555555555555555555543 23
Q ss_pred CcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccC
Q 003199 254 PDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAI 333 (840)
Q Consensus 254 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 333 (840)
+..|..+++|++|++++|++++..+..+..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+..+..++
T Consensus 146 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 225 (285)
T 1ozn_A 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred HhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCc
Confidence 33455555666666666666544444455556666666666666555555555555666666666665554444555555
Q ss_pred cccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhc
Q 003199 334 SLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSL 377 (840)
Q Consensus 334 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 377 (840)
+|+.|+|++|++....+. ......++.+..+.|.+....|..+
T Consensus 226 ~L~~L~l~~N~~~c~~~~-~~~~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 226 ALQYLRLNDNPWVCDCRA-RPLWAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp TCCEEECCSSCEECSGGG-HHHHHHHHHCCSEECCCBEEESGGG
T ss_pred ccCEEeccCCCccCCCCc-HHHHHHHHhcccccCccccCCchHh
Confidence 566666666555432211 1112334444455555555555444
No 307
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.8e-31 Score=311.64 Aligned_cols=402 Identities=13% Similarity=0.087 Sum_probs=233.3
Q ss_pred CCCCCCCCEEecCCCcCc---ccCCcccc------------CCCCCCEEeCCCCCCCccCCCCcccccc-cc-cccEEEe
Q 003199 13 FSPMQNLRRLDLSNNLFT---GQFPLSVF------------NLTNLEVLSFNENPGFKLWKLPESSIFR-LT-KLRIMVL 75 (840)
Q Consensus 13 ~~~l~~L~~L~Ls~n~i~---~~~p~~~~------------~l~~L~~L~L~~N~~~~l~~l~~~~~~~-l~-~L~~L~L 75 (840)
+..+++|+.|+|++|... +.+|..++ .+++|++|+|++| .+.......+.. ++ +|+.|+|
T Consensus 69 ~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~---~i~~~~~~~l~~~~~~~L~~L~L 145 (592)
T 3ogk_B 69 SRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRM---IVSDLDLDRLAKARADDLETLKL 145 (592)
T ss_dssp HHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESC---BCCHHHHHHHHHHHGGGCCEEEE
T ss_pred HHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeecc---EecHHHHHHHHHhccccCcEEEC
Confidence 345677777777765321 22332222 6777777777777 343333333444 23 3777777
Q ss_pred cCccc-cc-cCCccccCCCCCcEEEccCCccccc----CchhhhcCCCCCeeecccCccc---cccCCcccCCCCCCCee
Q 003199 76 ATCAL-HG-QIPASIGNVTSLTDLELTGNFITGH----IPPEIGLLKNLRQLELYYNQQL---AGTIPEELGNLTELTDL 146 (840)
Q Consensus 76 ~~n~l-~~-~~~~~~~~l~~L~~L~L~~n~i~~~----~p~~~~~l~~L~~L~L~~n~~~---~~~~p~~l~~l~~L~~L 146 (840)
++|.- .. .++....++++|++|+|++|.+++. ++..+..+++|+.|+|++|... ...++..+.++++|++|
T Consensus 146 ~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L 225 (592)
T 3ogk_B 146 DKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSV 225 (592)
T ss_dssp ESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEE
T ss_pred cCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEE
Confidence 77762 11 1222234567777777777777654 3344566777777777777621 12334445567777777
Q ss_pred eccCCcccccCCccccCCCCCcEEEeeccccc---cccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccc
Q 003199 147 DMSVNHLSGKIPESILRLPKLRVLQLYNNSLS---GEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSEN 223 (840)
Q Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~---~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 223 (840)
+|++|.+.+ ++..+..+++|+.|+++.+... ...+..+..+++|+.|+++++... .++..+..+++|++|+|++|
T Consensus 226 ~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~ 303 (592)
T 3ogk_B 226 KVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYA 303 (592)
T ss_dssp ECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTC
T ss_pred eccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCC
Confidence 777777774 5566777777777777654322 122344556667777777765443 45555666677777777777
Q ss_pred cccccCC-ccccCCCCchhhhcccccccccCCcccccccCCceEEeeC-----------ceeeccCC-ccccCCCcccEE
Q 003199 224 KLSGPLP-AKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSN-----------NHLEGSIP-EGILSLPHVSII 290 (840)
Q Consensus 224 ~l~~~~~-~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~-----------N~l~~~~~-~~~~~l~~L~~L 290 (840)
.+++... ..+..+++|+.|++..+...+.++..+..+++|++|++++ |.+++... ..+..+++|+.|
T Consensus 304 ~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L 383 (592)
T 3ogk_B 304 LLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYM 383 (592)
T ss_dssp CCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEE
T ss_pred cCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEE
Confidence 7654333 2345667777777763333333344445667777777772 45543211 122346677777
Q ss_pred eccCCcccccCCcccCC-CCCCceeecc----cceeeec-----cchhhcccCcccEEEcCCCc--cCCCCCCccc-Ccc
Q 003199 291 DLSYNSFSGPIANTVGN-ARNLSELFMQ----RNQISGF-----IPSEIYRAISLVKIDLSDNL--LSGPIPSGIG-NLK 357 (840)
Q Consensus 291 ~L~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~-~l~ 357 (840)
+++.|.+++..+..+.. +++|+.|+++ .|.+++. ++..+..+++|+.|+|++|. +++..+..++ .++
T Consensus 384 ~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~ 463 (592)
T 3ogk_B 384 AVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSP 463 (592)
T ss_dssp EEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCT
T ss_pred EeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCc
Confidence 77777776655555544 6677777774 5566542 33345556777777776433 5444333333 366
Q ss_pred ccchhcccCCccCC-CcchhcccccCCCEEECcCccccccCCchh-hcc-CCCeEEccCCCCcCc
Q 003199 358 KLNLLMLQSNKLNS-SIPNSLSSLKSLNVLDLSNNLLTGYIPESL-CEL-LPNSINFSNNRLSGP 419 (840)
Q Consensus 358 ~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~~-~~~~l~l~~N~l~~~ 419 (840)
+|+.|+|++|++++ .++..+..+++|++|+|++|++++.....+ ..+ .++.|++++|+++..
T Consensus 464 ~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 464 NVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp TCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred cceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 67777777777764 234445666777777777777664432222 222 456777777776654
No 308
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.8e-28 Score=262.58 Aligned_cols=235 Identities=19% Similarity=0.235 Sum_probs=176.1
Q ss_pred CCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceec
Q 003199 140 LTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLD 219 (840)
Q Consensus 140 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~ 219 (840)
.++++.|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|+++ .+|..+..+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 356666666666666 45556666667777777777766 55566666777777777777766 5566666677777777
Q ss_pred cccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccc
Q 003199 220 LSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSG 299 (840)
Q Consensus 220 L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 299 (840)
|++|++.+.+|..+... ..++.|..+++|++|++++|+++ .+|..+..+++|+.|+|++|++++
T Consensus 157 L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 220 (328)
T 4fcg_A 157 IRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA 220 (328)
T ss_dssp EEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC
T ss_pred CCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc
Confidence 77766665555544321 22345677888888888888888 778888888888888888888885
Q ss_pred cCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhccc
Q 003199 300 PIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSS 379 (840)
Q Consensus 300 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 379 (840)
. +..++.+++|++|+|++|.+.+.+|..+..+++|+.|+|++|.+.+.+|..++++++|+.|+|++|++.+.+|..+..
T Consensus 221 l-~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 221 L-GPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQ 299 (328)
T ss_dssp C-CGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGG
T ss_pred C-chhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhh
Confidence 4 445788888888888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred ccCCCEEECcCcccc
Q 003199 380 LKSLNVLDLSNNLLT 394 (840)
Q Consensus 380 l~~L~~L~l~~N~l~ 394 (840)
+++|+.+++..|.+.
T Consensus 300 L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 300 LPANCIILVPPHLQA 314 (328)
T ss_dssp SCTTCEEECCGGGSC
T ss_pred ccCceEEeCCHHHHH
Confidence 888888888877765
No 309
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.4e-28 Score=271.46 Aligned_cols=248 Identities=24% Similarity=0.259 Sum_probs=216.2
Q ss_pred CCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEe
Q 003199 93 SLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQL 172 (840)
Q Consensus 93 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 172 (840)
....++.+++.++ .+|..+. ++++.|+|++|+ +....+..|.++++|++|+|++|.++.+.+..|.++++|++|+|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~-i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQ-IQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCC-CCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCc-CCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 4678999999999 6777664 789999999998 56666788999999999999999999888899999999999999
Q ss_pred eccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceecccccc-ccccCCccccCCCCchhhhcccccccc
Q 003199 173 YNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENK-LSGPLPAKVCSRGKLQYFLVLQNMFSG 251 (840)
Q Consensus 173 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~n~~~~ 251 (840)
++|+|+.+.+..|..+++|++|+|++|+++.+.+..|..+++|+.|+|++|+ +..
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~------------------------ 175 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSY------------------------ 175 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCE------------------------
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcce------------------------
Confidence 9999998888899999999999999999998888899999999999999854 432
Q ss_pred cCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcc
Q 003199 252 VLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYR 331 (840)
Q Consensus 252 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 331 (840)
..+..|..+++|++|++++|+++ .+| .+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|..
T Consensus 176 i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 253 (440)
T 3zyj_A 176 ISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDN 253 (440)
T ss_dssp ECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTT
T ss_pred eCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcC
Confidence 23345777788888888888887 555 4778888999999999998888888888999999999999998888888888
Q ss_pred cCcccEEEcCCCccCCCCCCcccCccccchhcccCCccC
Q 003199 332 AISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLN 370 (840)
Q Consensus 332 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 370 (840)
+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.
T Consensus 254 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 254 LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 999999999999999777778888999999999999886
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=5.2e-28 Score=271.90 Aligned_cols=249 Identities=22% Similarity=0.239 Sum_probs=218.7
Q ss_pred CCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEe
Q 003199 93 SLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQL 172 (840)
Q Consensus 93 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 172 (840)
....++.+++.++ .+|..+. ++|+.|+|++|+ +.+..+..|.++++|++|+|++|.|+++.+..|.++++|++|+|
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~-i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENN-IQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSC-CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEECCCCcC-ccCCCCC--CCccEEECcCCc-CceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 4678999999999 6776554 799999999998 66677889999999999999999999888899999999999999
Q ss_pred eccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccc-cccccCCccccCCCCchhhhcccccccc
Q 003199 173 YNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSEN-KLSGPLPAKVCSRGKLQYFLVLQNMFSG 251 (840)
Q Consensus 173 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~l~~n~~~~ 251 (840)
++|+|+.+.+..|.++++|++|+|++|+++.+.+..|..+++|+.|+|++| .+..
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~------------------------ 186 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEY------------------------ 186 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCE------------------------
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccc------------------------
Confidence 999999888889999999999999999999888889999999999999985 4432
Q ss_pred cCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcc
Q 003199 252 VLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYR 331 (840)
Q Consensus 252 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 331 (840)
..+..|..+++|++|++++|+++ .+| .+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..+..
T Consensus 187 i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 264 (452)
T 3zyi_A 187 ISEGAFEGLFNLKYLNLGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDG 264 (452)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred cChhhccCCCCCCEEECCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcC
Confidence 23345777888888888888887 344 4778889999999999999888889999999999999999999888888999
Q ss_pred cCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCC
Q 003199 332 AISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNS 371 (840)
Q Consensus 332 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 371 (840)
+++|+.|+|++|+|++..+..|..+++|+.|+|++|++..
T Consensus 265 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 265 LASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 9999999999999997777888899999999999998863
No 311
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.3e-29 Score=290.10 Aligned_cols=195 Identities=17% Similarity=0.112 Sum_probs=138.0
Q ss_pred eeeccCCcEEEEE-EeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhcc-CCCCcceeeeEEecCccceEE
Q 003199 533 KVGQGGSGTVYKI-DLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNI-RHKNIVKLYCYFSSLYCNLLV 610 (840)
Q Consensus 533 ~lg~G~~g~Vy~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lV 610 (840)
..+.|+.|.++.+ .+..|+.||||++..................+.|.+|+++|+++ .|+||+++++++++....|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 3566777766664 34468999999996554333333444455678899999999999 699999999999999999999
Q ss_pred EeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhhhhccC
Q 003199 611 YEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARG 690 (840)
Q Consensus 611 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 690 (840)
|||++|++|.+.+.... .++. .+|+.||+.||+|+|+ +|||||||||+|||++++|.+||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~---~~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~- 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDR---EKILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD- 392 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCH---HHHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCC-CCCH---HHHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCCCC-
Confidence 99999999999998765 4554 3589999999999999 99999999999999999999999999999876432
Q ss_pred CCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCC
Q 003199 691 GKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKP 738 (840)
Q Consensus 691 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p 738 (840)
.......+||+.|||||++.+ .+..++|+||+|++++++.++..|
T Consensus 393 --~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 --CSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred --CccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 223445789999999998865 567789999999998888766444
No 312
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=7.1e-28 Score=257.93 Aligned_cols=225 Identities=23% Similarity=0.295 Sum_probs=146.1
Q ss_pred CCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEE
Q 003199 116 KNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLS 195 (840)
Q Consensus 116 ~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 195 (840)
++++.|+|++|. ...+|..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|+++ .+|..+.++++|++|+
T Consensus 81 ~~l~~L~L~~n~--l~~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 81 PGRVALELRSVP--LPQFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp TTCCEEEEESSC--CSSCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred cceeEEEccCCC--chhcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 444444444444 2234444444444555555555444 34444455555555555555554 3344455555555555
Q ss_pred ccCCcCcccCCcCCC---------CCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceE
Q 003199 196 LYDNSLTGEVPQDLG---------QWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRF 266 (840)
Q Consensus 196 L~~N~l~~~~~~~l~---------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 266 (840)
|++|++.+.+|..+. ++++|++|+|++|+++ .+|..+..+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-------------------------~lp~~l~~l~~L~~L 211 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-------------------------SLPASIANLQNLKSL 211 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-------------------------CCCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-------------------------cchHhhcCCCCCCEE
Confidence 555444444444433 3566666666666655 445566777777777
Q ss_pred EeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccC
Q 003199 267 RVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLS 346 (840)
Q Consensus 267 ~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 346 (840)
++++|+++ .+|..+..+++|+.|+|++|.+.+..|..++.+++|+.|+|++|.+.+.+|..+..+++|+.|+|++|++.
T Consensus 212 ~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 212 KIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp EEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred EccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 77777777 45666777888888888888887777878888888888888888887788888888888888888888888
Q ss_pred CCCCCcccCccccchhcccCCccC
Q 003199 347 GPIPSGIGNLKKLNLLMLQSNKLN 370 (840)
Q Consensus 347 ~~~p~~~~~l~~L~~L~Ls~N~l~ 370 (840)
+.+|..++++++|+.+++..|.+.
T Consensus 291 ~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 291 SRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hhccHHHhhccCceEEeCCHHHHH
Confidence 888888888888888888777664
No 313
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.8e-27 Score=272.26 Aligned_cols=266 Identities=27% Similarity=0.327 Sum_probs=159.2
Q ss_pred ccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeecc
Q 003199 70 LRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMS 149 (840)
Q Consensus 70 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~ 149 (840)
++.|++++|.++ .+|..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+ ...+|. .+++|++|+|+
T Consensus 42 l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~--l~~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 42 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQ--LTSLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCC--CSCCCC---CCTTCCEEEEC
T ss_pred CcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCc--CCcCCC---CCCCCCEEECc
Confidence 444555555544 3344333 45555555555555 3333 34555555555554 223333 34555555555
Q ss_pred CCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccC
Q 003199 150 VNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPL 229 (840)
Q Consensus 150 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 229 (840)
+|++++ +|. .+++|+.|++++|+|+.++. .+++|++|+|++|++++ +|. .+.+|+.|++++|++++
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~-- 175 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTSLPV----LPPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTS-- 175 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSCCCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC--
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCcCCC----CCCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCC--
Confidence 555553 222 34555555555555554322 13556666666665553 222 22445555666555552
Q ss_pred CccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCC
Q 003199 230 PAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNAR 309 (840)
Q Consensus 230 ~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 309 (840)
+| ..+++|+.|++++|+++ .+|.. +++|+.|++++|.++.... .++
T Consensus 176 -----------------------l~---~~~~~L~~L~Ls~N~l~-~l~~~---~~~L~~L~L~~N~l~~l~~----~~~ 221 (622)
T 3g06_A 176 -----------------------LP---MLPSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLTSLPA----LPS 221 (622)
T ss_dssp -----------------------CC---CCCTTCCEEECCSSCCS-CCCCC---CTTCCEEECCSSCCSSCCC----CCT
T ss_pred -----------------------Cc---ccCCCCcEEECCCCCCC-CCCCc---cchhhEEECcCCcccccCC----CCC
Confidence 22 22355666666666666 23332 3566777777777764332 246
Q ss_pred CCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECc
Q 003199 310 NLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLS 389 (840)
Q Consensus 310 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 389 (840)
+|+.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..|..+++|+.|+|+
T Consensus 222 ~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 222 GLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 77778888887774 44 34577888888888888 4555 5678889999999998 678888999999999999
Q ss_pred CccccccCCchhhcc
Q 003199 390 NNLLTGYIPESLCEL 404 (840)
Q Consensus 390 ~N~l~~~~p~~~~~~ 404 (840)
+|++++.+|..+..+
T Consensus 293 ~N~l~~~~~~~l~~L 307 (622)
T 3g06_A 293 GNPLSERTLQALREI 307 (622)
T ss_dssp SCCCCHHHHHHHHHH
T ss_pred CCCCCCcCHHHHHhc
Confidence 999998888877765
No 314
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.9e-27 Score=272.23 Aligned_cols=268 Identities=24% Similarity=0.327 Sum_probs=155.2
Q ss_pred CCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEE
Q 003199 18 NLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDL 97 (840)
Q Consensus 18 ~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 97 (840)
++++|++++|.|+ .+|..+. ++|+.|+|++| .+..+|. .+++|++|+|++|.+++ +|. .+++|++|
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N---~l~~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L 106 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDN---NLTSLPA----LPPELRTLEVSGNQLTS-LPV---LPPGLLEL 106 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSC---CCSCCCC----CCTTCCEEEECSCCCSC-CCC---CCTTCCEE
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCC---CCCCCCC----cCCCCCEEEcCCCcCCc-CCC---CCCCCCEE
Confidence 4777777777777 6666554 67777777777 4444444 34566666666666552 333 44556666
Q ss_pred EccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeecccc
Q 003199 98 ELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSL 177 (840)
Q Consensus 98 ~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 177 (840)
+|++|+|++ +|. .+++|+.|++++| +++. +|.. +++|++|+|++|++
T Consensus 107 ~Ls~N~l~~-l~~---~l~~L~~L~L~~N-------------------------~l~~-lp~~---l~~L~~L~Ls~N~l 153 (622)
T 3g06_A 107 SIFSNPLTH-LPA---LPSGLCKLWIFGN-------------------------QLTS-LPVL---PPGLQELSVSDNQL 153 (622)
T ss_dssp EECSCCCCC-CCC---CCTTCCEEECCSS-------------------------CCSC-CCCC---CTTCCEEECCSSCC
T ss_pred ECcCCcCCC-CCC---CCCCcCEEECCCC-------------------------CCCc-CCCC---CCCCCEEECcCCcC
Confidence 666665552 222 3444555555544 4442 2221 24455555555555
Q ss_pred ccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCccc
Q 003199 178 SGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSL 257 (840)
Q Consensus 178 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~ 257 (840)
+++. . .+++|+.|++++|+++. +| ..+++|+.|+|++|++++. |.
T Consensus 154 ~~l~-~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~l-------------------------~~-- 198 (622)
T 3g06_A 154 ASLP-A---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLASL-------------------------PT-- 198 (622)
T ss_dssp SCCC-C---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCC-------------------------CC--
T ss_pred CCcC-C---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCCC-------------------------CC--
Confidence 4322 1 23455555555555553 23 2345555666666655521 11
Q ss_pred ccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccE
Q 003199 258 ARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVK 337 (840)
Q Consensus 258 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 337 (840)
.+++|+.|++++|.++ .+|.. +++|+.|+|++|++++.. ..+++|+.|+|++|+|++ +|. .+++|+.
T Consensus 199 -~~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~lp----~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~ 265 (622)
T 3g06_A 199 -LPSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTSLP----VLPSELKELMVSGNRLTS-LPM---LPSGLLS 265 (622)
T ss_dssp -CCTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSCCC----CCCTTCCEEECCSSCCSC-CCC---CCTTCCE
T ss_pred -ccchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCcCC----CCCCcCcEEECCCCCCCc-CCc---ccccCcE
Confidence 1134555555555555 33322 355666666666666532 335667777777777763 443 4567888
Q ss_pred EEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhccccc
Q 003199 338 IDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLK 381 (840)
Q Consensus 338 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 381 (840)
|+|++|+|+ .+|..+.++++|+.|+|++|++++..|..+..++
T Consensus 266 L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 266 LSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp EECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred EeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 888888887 6677788888888888888888887777777665
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=9.3e-30 Score=271.09 Aligned_cols=245 Identities=20% Similarity=0.215 Sum_probs=116.0
Q ss_pred CCCCCeeeccCCcccccCCccccCCCCCcEEEeecccccc-ccchhhh-------cCCCCCEEEccCCcCcccCCcCC--
Q 003199 140 LTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSG-EISSVIA-------NSTTLTMLSLYDNSLTGEVPQDL-- 209 (840)
Q Consensus 140 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~~l-- 209 (840)
.++|+.|++++|.+ .+|..+... |+.|+|++|.+.. ..+..+. ++++|++|+|++|++++..|..+
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 34455555555555 233333322 5555555555521 2233222 45566666666666655555544
Q ss_pred CCCCCcceeccccccccccCCccccCC-----CCchhhhcccccccccCCcccccccCCceEEeeCceeecc--CCccc-
Q 003199 210 GQWSPLVVLDLSENKLSGPLPAKVCSR-----GKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGS--IPEGI- 281 (840)
Q Consensus 210 ~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~~~- 281 (840)
..+++|++|+|++|++++. |..+..+ ++|++|++++|.+.+..+..|+.+++|++|++++|++.+. .+..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 5566666666666666543 3333332 3333333333333333334444455555555555554332 11122
Q ss_pred -cCCCcccEEeccCCcccc---cCCcccCCCCCCceeecccceeeeccc-hhhcccCcccEEEcCCCccCCCCCCcccCc
Q 003199 282 -LSLPHVSIIDLSYNSFSG---PIANTVGNARNLSELFMQRNQISGFIP-SEIYRAISLVKIDLSDNLLSGPIPSGIGNL 356 (840)
Q Consensus 282 -~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 356 (840)
..+++|++|+|++|++++ .....+..+++|++|+|++|++++..| ..+..+++|+.|+|++|+|+ .+|..+.
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 445555555555555542 111223344555555555555554443 22333455555555555555 4444443
Q ss_pred cccchhcccCCccCCCcchhcccccCCCEEECcCcccc
Q 003199 357 KKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLT 394 (840)
Q Consensus 357 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 394 (840)
++|+.|+|++|+|++. |. +..+++|++|+|++|+|+
T Consensus 274 ~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 274 AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 4555555555555543 33 555555555555555554
No 316
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.95 E-value=1.5e-30 Score=303.89 Aligned_cols=383 Identities=13% Similarity=0.052 Sum_probs=278.5
Q ss_pred CCCCCCEEecCCCcCcccCCccccCC--CCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcccccc----CCccc
Q 003199 15 PMQNLRRLDLSNNLFTGQFPLSVFNL--TNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQ----IPASI 88 (840)
Q Consensus 15 ~l~~L~~L~Ls~n~i~~~~p~~~~~l--~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~----~~~~~ 88 (840)
.+++|++|+|++|.+++..+..+..+ .+|++|+|++|.......+ .....++++|++|+|++|.+.+. ++..+
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l-~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~ 188 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGL-LSIVTHCRKIKTLLMEESSFSEKDGKWLHELA 188 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHH-HHHHHHCTTCSEEECTTCEEECCCSHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHH-HHHHhhCCCCCEEECccccccCcchhHHHHHH
Confidence 68899999999998887777777664 4499999998841111011 11234788999999999988654 33345
Q ss_pred cCCCCCcEEEccCCccc----ccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCccc---ccCCccc
Q 003199 89 GNVTSLTDLELTGNFIT----GHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLS---GKIPESI 161 (840)
Q Consensus 89 ~~l~~L~~L~L~~n~i~----~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~---~~~~~~~ 161 (840)
..+++|++|+|++|.++ +.++..+..+++|+.|+|++|. ...+|..+..+++|++|+++.+... ...+..+
T Consensus 189 ~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~--~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l 266 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFE--ILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNL 266 (592)
T ss_dssp HHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCB--GGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCC
T ss_pred hcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCcc--HHHHHHHHhhhhHHHhhcccccccccchHHHHHHh
Confidence 67889999999999987 3455667788999999999987 3346778888999999999864433 2334567
Q ss_pred cCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCC-cCCCCCCCcceeccccccccccCCccccCCCCch
Q 003199 162 LRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVP-QDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQ 240 (840)
Q Consensus 162 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 240 (840)
..+++|+.|+++++... ..+..+..+++|++|+|++|.++.... ..+..+++|+.|+++++-..+.++..+..+++|+
T Consensus 267 ~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~ 345 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLK 345 (592)
T ss_dssp CCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCC
T ss_pred hccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCC
Confidence 77889999999887544 566778888999999999999764333 3357789999999994433333344446678899
Q ss_pred hhhccc-----------ccccccC-CcccccccCCceEEeeCceeeccCCccccC-CCcccEEecc----CCccccc---
Q 003199 241 YFLVLQ-----------NMFSGVL-PDSLARCKNLLRFRVSNNHLEGSIPEGILS-LPHVSIIDLS----YNSFSGP--- 300 (840)
Q Consensus 241 ~L~l~~-----------n~~~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~-l~~L~~L~L~----~N~l~~~--- 300 (840)
.|++.+ |.++... +..+..+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.+++.
T Consensus 346 ~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~ 425 (592)
T 3ogk_B 346 RLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLD 425 (592)
T ss_dssp EEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCH
T ss_pred EEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHH
Confidence 999983 5555432 233456889999999989888766666665 8889999996 6777764
Q ss_pred --CCcccCCCCCCceeecccc--eeeeccchhhcc-cCcccEEEcCCCccCC-CCCCcccCccccchhcccCCccCCC-c
Q 003199 301 --IANTVGNARNLSELFMQRN--QISGFIPSEIYR-AISLVKIDLSDNLLSG-PIPSGIGNLKKLNLLMLQSNKLNSS-I 373 (840)
Q Consensus 301 --~~~~~~~l~~L~~L~L~~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~ 373 (840)
.+..+..+++|+.|+|++| .+++..+..+.. +++|+.|+|++|++++ .++..+..+++|+.|+|++|++++. +
T Consensus 426 ~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 505 (592)
T 3ogk_B 426 NGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAI 505 (592)
T ss_dssp HHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHH
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHH
Confidence 2334667889999999743 466655555554 7889999999999875 3444557789999999999998654 3
Q ss_pred chhcccccCCCEEECcCccccccCCchh
Q 003199 374 PNSLSSLKSLNVLDLSNNLLTGYIPESL 401 (840)
Q Consensus 374 ~~~~~~l~~L~~L~l~~N~l~~~~p~~~ 401 (840)
+..+..+++|++|+|++|++++.-...+
T Consensus 506 ~~~~~~l~~L~~L~ls~n~it~~~~~~l 533 (592)
T 3ogk_B 506 AAAVTKLPSLRYLWVQGYRASMTGQDLM 533 (592)
T ss_dssp HHHHHHCSSCCEEEEESCBCCTTCTTGG
T ss_pred HHHHHhcCccCeeECcCCcCCHHHHHHH
Confidence 4445678999999999999886533333
No 317
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4e-29 Score=266.85 Aligned_cols=268 Identities=20% Similarity=0.207 Sum_probs=147.3
Q ss_pred ccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeecc
Q 003199 70 LRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMS 149 (840)
Q Consensus 70 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~ 149 (840)
++.++++.+.+.......+..+++|++|+|++|++++..|..|..+++|++|+|++|+ +.+..+ +..+++|++|+|+
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~-l~~~~~--~~~l~~L~~L~Ls 88 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNV-LYETLD--LESLSTLRTLDLN 88 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSC-CEEEEE--ETTCTTCCEEECC
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCc-CCcchh--hhhcCCCCEEECc
Confidence 4555555555554444444555566666666666665555566666666666666655 222221 5555555555555
Q ss_pred CCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccC
Q 003199 150 VNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPL 229 (840)
Q Consensus 150 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~ 229 (840)
+|++++.. ..++|++|++++|++++..+.. +++|++|++++|++++..+..+..++
T Consensus 89 ~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~---------------- 144 (317)
T 3o53_A 89 NNYVQELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRS---------------- 144 (317)
T ss_dssp SSEEEEEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGS----------------
T ss_pred CCcccccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccC----------------
Confidence 55555321 1244555555555544333222 23344444444444433333333344
Q ss_pred CccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCcccc-CCCcccEEeccCCcccccCCcccCCC
Q 003199 230 PAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGIL-SLPHVSIIDLSYNSFSGPIANTVGNA 308 (840)
Q Consensus 230 ~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l 308 (840)
+|++|++++|.+++..+..+. .+++|+.|+|++|++++... ...+
T Consensus 145 --------------------------------~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l 190 (317)
T 3o53_A 145 --------------------------------RVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVF 190 (317)
T ss_dssp --------------------------------SEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCC
T ss_pred --------------------------------CCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--cccc
Confidence 444444444444433333332 34555555555555554322 2235
Q ss_pred CCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccC-CCcchhcccccCCCEEE
Q 003199 309 RNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLN-SSIPNSLSSLKSLNVLD 387 (840)
Q Consensus 309 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~ 387 (840)
++|++|+|++|++++. |..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|+
T Consensus 191 ~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~ 268 (317)
T 3o53_A 191 AKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVA 268 (317)
T ss_dssp TTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHH
T ss_pred ccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEE
Confidence 6666666777766643 334667777777777777777 45666777777777777777776 56677777777788777
Q ss_pred Cc-CccccccCCch
Q 003199 388 LS-NNLLTGYIPES 400 (840)
Q Consensus 388 l~-~N~l~~~~p~~ 400 (840)
++ .+.++|..|..
T Consensus 269 l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 269 KQTVKKLTGQNEEE 282 (317)
T ss_dssp HHHHHHHHSSSSCC
T ss_pred CCCchhccCCchhc
Confidence 77 44666655543
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=5.5e-29 Score=265.76 Aligned_cols=193 Identities=18% Similarity=0.194 Sum_probs=98.7
Q ss_pred CCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEE
Q 003199 18 NLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDL 97 (840)
Q Consensus 18 ~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 97 (840)
.++.++++++.+....+..+..+++|++|+|++| .+..+++..|..+++|++|+|++|.+.+..+ +..+++|++|
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n---~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L 85 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGN---PLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTL 85 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTS---CCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEE
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCC---ccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEE
Confidence 3555666666666444444555566666666666 4555555556666666666666666654433 5566666666
Q ss_pred EccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeecccc
Q 003199 98 ELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSL 177 (840)
Q Consensus 98 ~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 177 (840)
+|++|++++.. ..++|++|++++|+ +.+..+ ..+++|++|++++|++++..+..+..+++|++|+|++|.+
T Consensus 86 ~Ls~n~l~~l~-----~~~~L~~L~l~~n~-l~~~~~---~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 156 (317)
T 3o53_A 86 DLNNNYVQELL-----VGPSIETLHAANNN-ISRVSC---SRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI 156 (317)
T ss_dssp ECCSSEEEEEE-----ECTTCCEEECCSSC-CSEEEE---CCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCC
T ss_pred ECcCCcccccc-----CCCCcCEEECCCCc-cCCcCc---cccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCC
Confidence 66666665321 22555555555554 222111 1234455555555555544444444555555555555555
Q ss_pred ccccchhh-hcCCCCCEEEccCCcCcccCCcCCCCCCCcceecccccccc
Q 003199 178 SGEISSVI-ANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLS 226 (840)
Q Consensus 178 ~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 226 (840)
++..+..+ ..+++|++|+|++|++++. + ....+++|++|+|++|+++
T Consensus 157 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~ 204 (317)
T 3o53_A 157 DTVNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLA 204 (317)
T ss_dssp CEEEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCC
T ss_pred CcccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCC
Confidence 54444333 2445555555555555432 1 1122444444444444443
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=6.2e-29 Score=264.72 Aligned_cols=251 Identities=21% Similarity=0.217 Sum_probs=164.0
Q ss_pred cCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccC-------CCCCCCeeeccCCcccccCCccc
Q 003199 89 GNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELG-------NLTELTDLDMSVNHLSGKIPESI 161 (840)
Q Consensus 89 ~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~-------~l~~L~~L~L~~n~l~~~~~~~~ 161 (840)
+..++|+.|++++|.+ .+|..+... |+.|+|++|++....+|..+. ++++|++|+|++|.+++..|..+
T Consensus 40 ~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 115 (312)
T 1wwl_A 40 GGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL 115 (312)
T ss_dssp EEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS
T ss_pred ccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH
Confidence 3344555556666665 344444433 666666666532334444443 56777777777777776666655
Q ss_pred --cCCCCCcEEEeeccccccccchhhhcC-----CCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccC--Ccc
Q 003199 162 --LRLPKLRVLQLYNNSLSGEISSVIANS-----TTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPL--PAK 232 (840)
Q Consensus 162 --~~l~~L~~L~L~~N~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~--~~~ 232 (840)
..+++|++|+|++|++++. |..+..+ ++|++|+|++|++++..+..|..+++|++|+|++|++.+.. +..
T Consensus 116 ~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 194 (312)
T 1wwl_A 116 LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISA 194 (312)
T ss_dssp SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHH
T ss_pred HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHH
Confidence 6777777777777777765 5666665 77777777777777766677777777777777777765321 111
Q ss_pred ccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeec---cCCccccCCCcccEEeccCCcccccCC-cccCCC
Q 003199 233 VCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEG---SIPEGILSLPHVSIIDLSYNSFSGPIA-NTVGNA 308 (840)
Q Consensus 233 ~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~---~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l 308 (840)
+ .+..+++|++|++++|++++ .....+..+++|+.|+|++|++++..+ ..+..+
T Consensus 195 ~----------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 195 L----------------------CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp S----------------------CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred H----------------------HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 1 12455666666666666652 111233456777777777777776553 445567
Q ss_pred CCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCC
Q 003199 309 RNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNS 371 (840)
Q Consensus 309 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 371 (840)
++|+.|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|++++
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 77888888888887 5666665 7888888888888865 55 7788888888888888874
No 320
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=7e-28 Score=272.14 Aligned_cols=233 Identities=18% Similarity=0.173 Sum_probs=110.3
Q ss_pred CCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccc
Q 003199 142 ELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLS 221 (840)
Q Consensus 142 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 221 (840)
+|++|+|++|.+++..|..|..+++|++|+|++|.+++..+ |..+++|++|+|++|.|++..+ .++|+.|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 55555555555555445555555555555555555554433 5555555555555555553221 1455555555
Q ss_pred cccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCcccc-CCCcccEEeccCCccccc
Q 003199 222 ENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGIL-SLPHVSIIDLSYNSFSGP 300 (840)
Q Consensus 222 ~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~ 300 (840)
+|.+++..+.. +++|+.|++++|.+.+..|..|..+++|+.|+|++|.+++..|..+. .+++|+.|+|++|.+++.
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~ 184 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV 184 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc
Confidence 55555332211 12233333333333333344444445555555555555544444443 345555555555555443
Q ss_pred CCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccC-CCcchhccc
Q 003199 301 IANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLN-SSIPNSLSS 379 (840)
Q Consensus 301 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~ 379 (840)
.+ +..+++|+.|+|++|+|++..| .+..+++|+.|+|++|.|++ +|..++.+++|+.|+|++|++. +.+|..+..
T Consensus 185 ~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~ 260 (487)
T 3oja_A 185 KG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSK 260 (487)
T ss_dssp EC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTT
T ss_pred cc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHh
Confidence 22 1224455555555555543222 24444455555555555542 3444444444555555555444 333444444
Q ss_pred ccCCCEEEC
Q 003199 380 LKSLNVLDL 388 (840)
Q Consensus 380 l~~L~~L~l 388 (840)
++.|+.|++
T Consensus 261 l~~L~~l~~ 269 (487)
T 3oja_A 261 NQRVQTVAK 269 (487)
T ss_dssp CHHHHHHHH
T ss_pred CCCCcEEec
Confidence 444444444
No 321
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=5.8e-27 Score=264.64 Aligned_cols=235 Identities=21% Similarity=0.237 Sum_probs=157.3
Q ss_pred CCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEe
Q 003199 93 SLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQL 172 (840)
Q Consensus 93 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 172 (840)
+|++|+|++|.+++..|..|..+++|++|+|++|. +.+..| +..+++|++|+|++|.|++..+ .++|++|++
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L 106 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNV-LYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHA 106 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSC-CEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEEC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCC-CCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEEC
Confidence 56666666666665555566666666666666665 222222 5555566666666665553221 245555555
Q ss_pred eccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhccccccccc
Q 003199 173 YNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGV 252 (840)
Q Consensus 173 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~ 252 (840)
++|.|++..+. .+++|++|+|++|.+++..|..+..+++|+.|+|++|.+ .+.
T Consensus 107 ~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l------------------------~~~ 159 (487)
T 3oja_A 107 ANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI------------------------DTV 159 (487)
T ss_dssp CSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCC------------------------CEE
T ss_pred cCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCC------------------------CCc
Confidence 55555544332 234455555555555544444455555555555555554 445
Q ss_pred CCcccc-cccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcc
Q 003199 253 LPDSLA-RCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYR 331 (840)
Q Consensus 253 ~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 331 (840)
.|..+. .+++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++.++. +..+++|+.|+|++|.|++ +|..+..
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~-lp~~l~~ 235 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPE-FQSAAGVTWISLRNNKLVL-IEKALRF 235 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGG-GGGGTTCSEEECTTSCCCE-ECTTCCC
T ss_pred ChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHh-HcCCCCccEEEecCCcCcc-cchhhcc
Confidence 555554 67889999999999885532 34588999999999999976555 8889999999999999995 6777888
Q ss_pred cCcccEEEcCCCccC-CCCCCcccCccccchhcccC
Q 003199 332 AISLVKIDLSDNLLS-GPIPSGIGNLKKLNLLMLQS 366 (840)
Q Consensus 332 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~ 366 (840)
+++|+.|++++|.+. +.+|..+..++.|+.++++.
T Consensus 236 l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~ 271 (487)
T 3oja_A 236 SQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQT 271 (487)
T ss_dssp CTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEeccc
Confidence 999999999999998 67778888999999999863
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1e-25 Score=235.50 Aligned_cols=208 Identities=20% Similarity=0.150 Sum_probs=125.7
Q ss_pred CCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcc
Q 003199 166 KLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVL 245 (840)
Q Consensus 166 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 245 (840)
+|++|++++|++++..+..|.++++|++|+|++|+++++.+..|..+++|++|+|++|++++.
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~----------------- 91 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSL----------------- 91 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEE-----------------
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCcc-----------------
Confidence 344444444444444444444444444444444444444444444444444444444444422
Q ss_pred cccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCccccc-CCcccCCCCCCceeecccceeeec
Q 003199 246 QNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGP-IANTVGNARNLSELFMQRNQISGF 324 (840)
Q Consensus 246 ~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~ 324 (840)
.+..|..+++|++|++++|.+.+..+..+..+++|++|++++|++++. .|..|+.+++|++|+|++|++++.
T Consensus 92 -------~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~ 164 (276)
T 2z62_A 92 -------ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (276)
T ss_dssp -------CTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred -------ChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcC
Confidence 222333444444444444444433333455555666666666666543 355666666777777777777666
Q ss_pred cchhhcccCccc----EEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCC
Q 003199 325 IPSEIYRAISLV----KIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 325 ~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 398 (840)
.+..+..+.+|+ .|++++|++++..+..+. ..+|+.|+|++|++++..+..|..+++|+.|+|++|++++..|
T Consensus 165 ~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 165 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 666666666665 788899988865555554 4589999999999987777778899999999999999997665
No 323
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=1.6e-28 Score=286.85 Aligned_cols=397 Identities=17% Similarity=0.185 Sum_probs=219.4
Q ss_pred CCCCCCCCEEecCCCcCcc---cCC------------ccccCCCCCCEEeCCCCCCCccCCCCccccc-ccccccEEEec
Q 003199 13 FSPMQNLRRLDLSNNLFTG---QFP------------LSVFNLTNLEVLSFNENPGFKLWKLPESSIF-RLTKLRIMVLA 76 (840)
Q Consensus 13 ~~~l~~L~~L~Ls~n~i~~---~~p------------~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~-~l~~L~~L~L~ 76 (840)
+..+++|+.|+|++|.... ..| ..+..+++|++|+|++| .+.......+. .+++|+.|+|+
T Consensus 62 ~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~---~~~~~~~~~l~~~~~~L~~L~L~ 138 (594)
T 2p1m_B 62 IRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRM---VVTDDCLELIAKSFKNFKVLVLS 138 (594)
T ss_dssp HHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESC---BCCHHHHHHHHHHCTTCCEEEEE
T ss_pred HhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCc---EEcHHHHHHHHHhCCCCcEEeCC
Confidence 3456777777777765221 111 12345677777777777 33333333333 56777777777
Q ss_pred Cc-ccccc-CCccccCCCCCcEEEccCCcccccCchhhh----cCCCCCeeecccCc--cccccCCcccCCCCCCCeeec
Q 003199 77 TC-ALHGQ-IPASIGNVTSLTDLELTGNFITGHIPPEIG----LLKNLRQLELYYNQ--QLAGTIPEELGNLTELTDLDM 148 (840)
Q Consensus 77 ~n-~l~~~-~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~----~l~~L~~L~L~~n~--~~~~~~p~~l~~l~~L~~L~L 148 (840)
+| .+... ++..+.++++|++|+|++|.+++..+..+. .+++|+.|++++|. .....++..+..+++|++|+|
T Consensus 139 ~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L 218 (594)
T 2p1m_B 139 SCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKL 218 (594)
T ss_dssp SCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEEC
T ss_pred CcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEec
Confidence 77 44322 333444677777777777777654444443 45577777777764 111111222334577777777
Q ss_pred cCC-cccccCCccccCCCCCcEEEeec-------cccccccchhhhcCCCCCEE-EccCCcCcccCCcCCCCCCCcceec
Q 003199 149 SVN-HLSGKIPESILRLPKLRVLQLYN-------NSLSGEISSVIANSTTLTML-SLYDNSLTGEVPQDLGQWSPLVVLD 219 (840)
Q Consensus 149 ~~n-~l~~~~~~~~~~l~~L~~L~L~~-------N~l~~~~~~~~~~l~~L~~L-~L~~N~l~~~~~~~l~~l~~L~~L~ 219 (840)
++| .+.+ ++..+..+++|+.|+++. |.+.+. +..+.++++|+.| .+.+.... .++..+..+++|+.|+
T Consensus 219 ~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l-~~~l~~~~~L~~Ls~~~~~~~~-~l~~~~~~~~~L~~L~ 295 (594)
T 2p1m_B 219 NRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGL-SVALSGCKELRCLSGFWDAVPA-YLPAVYSVCSRLTTLN 295 (594)
T ss_dssp CTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHH-HHHHHTCTTCCEEECCBTCCGG-GGGGGHHHHTTCCEEE
T ss_pred CCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHH-HHHHhcCCCcccccCCcccchh-hHHHHHHhhCCCCEEE
Confidence 777 4443 556666677777777433 334432 2355666666666 33332221 2333333566777777
Q ss_pred cccccccccCCc-cccCCCCchhhhcccccccccCCcccccccCCceEEeeC---------ceeeccCCcccc-CCCccc
Q 003199 220 LSENKLSGPLPA-KVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSN---------NHLEGSIPEGIL-SLPHVS 288 (840)
Q Consensus 220 L~~N~l~~~~~~-~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~---------N~l~~~~~~~~~-~l~~L~ 288 (840)
|++|.+++.... .+..+++|+.|.+.+|.....++.....+++|++|++.+ +.+++.....+. .+++|+
T Consensus 296 L~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~ 375 (594)
T 2p1m_B 296 LSYATVQSYDLVKLLCQCPKLQRLWVLDYIEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLE 375 (594)
T ss_dssp CTTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCC
T ss_pred ccCCCCCHHHHHHHHhcCCCcCEEeCcCccCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHH
Confidence 777776543222 234566777777776622112222233467777777733 344322222222 356777
Q ss_pred EEeccCCcccccCCcccC-CCCCCceeecc--c----ceeee-----ccchhhcccCcccEEEcCCCccCCCCCCcccC-
Q 003199 289 IIDLSYNSFSGPIANTVG-NARNLSELFMQ--R----NQISG-----FIPSEIYRAISLVKIDLSDNLLSGPIPSGIGN- 355 (840)
Q Consensus 289 ~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~- 355 (840)
.|+++.|.+++.....+. .+++|+.|+|+ + |.+++ .++..+..+++|+.|+|++ .+++..+..++.
T Consensus 376 ~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~ 454 (594)
T 2p1m_B 376 SVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTY 454 (594)
T ss_dssp EEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHH
T ss_pred HHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHh
Confidence 777777776654444443 46677777777 3 44441 1122245566777777766 555444444443
Q ss_pred ccccchhcccCCccCCCcchhc-ccccCCCEEECcCccccccCCchhhc-c-CCCeEEccCCCC
Q 003199 356 LKKLNLLMLQSNKLNSSIPNSL-SSLKSLNVLDLSNNLLTGYIPESLCE-L-LPNSINFSNNRL 416 (840)
Q Consensus 356 l~~L~~L~Ls~N~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~p~~~~~-~-~~~~l~l~~N~l 416 (840)
+++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++..+..+.. + .++.|++++|++
T Consensus 455 ~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 455 AKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp CTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred chhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 6667777777777765444444 55677777777777775443332222 2 456777777766
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=4.5e-25 Score=230.70 Aligned_cols=205 Identities=22% Similarity=0.255 Sum_probs=115.9
Q ss_pred CCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEE
Q 003199 18 NLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDL 97 (840)
Q Consensus 18 ~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 97 (840)
+|++|+|++|.|++..+..|.++++|++|+|++| .+..++...|..+++|++|+|++|.+++..+..|.++++|++|
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n---~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRC---EIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKL 105 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTC---CCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEE
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCC---cCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEE
Confidence 4666666666666555555666666666666666 4445555556666666666666666655555556666666666
Q ss_pred EccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCc----EEEee
Q 003199 98 ELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLR----VLQLY 173 (840)
Q Consensus 98 ~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~L~ 173 (840)
++++|.+++..+..+..+++|++|++++|++....+|..+..+++|++|+|++|++++..+..|..+++|+ .|+++
T Consensus 106 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls 185 (276)
T 2z62_A 106 VAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185 (276)
T ss_dssp ECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECC
T ss_pred ECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecC
Confidence 66666666444445556666666666665522223455555566666666666666554444554444444 55666
Q ss_pred ccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceecccccccc
Q 003199 174 NNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLS 226 (840)
Q Consensus 174 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 226 (840)
+|.+++..+..+.. .+|++|+|++|++++..+..|..+++|+.|+|++|++.
T Consensus 186 ~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 237 (276)
T 2z62_A 186 LNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWD 237 (276)
T ss_dssp SSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBC
T ss_pred CCcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccc
Confidence 66665444444333 25666666666665444444555566666666666555
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=5.8e-28 Score=282.18 Aligned_cols=378 Identities=14% Similarity=0.086 Sum_probs=277.8
Q ss_pred CCCCCCEEecCCCcCcccCCcccc-CCCCCCEEeCCCCCCCccCCC-CcccccccccccEEEecCccccccCCccc----
Q 003199 15 PMQNLRRLDLSNNLFTGQFPLSVF-NLTNLEVLSFNENPGFKLWKL-PESSIFRLTKLRIMVLATCALHGQIPASI---- 88 (840)
Q Consensus 15 ~l~~L~~L~Ls~n~i~~~~p~~~~-~l~~L~~L~L~~N~~~~l~~l-~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---- 88 (840)
.+++|++|+|++|.+++..+..+. .+++|++|+|++|. .+... ....+.++++|++|+|++|.+++..+..+
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~--~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~ 180 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCE--GFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP 180 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCE--EEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSC
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcC--CCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHh
Confidence 578999999999999987777776 69999999999993 22221 12334579999999999999876544433
Q ss_pred cCCCCCcEEEccCCc--ccc-cCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCC-------cccccCC
Q 003199 89 GNVTSLTDLELTGNF--ITG-HIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVN-------HLSGKIP 158 (840)
Q Consensus 89 ~~l~~L~~L~L~~n~--i~~-~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n-------~l~~~~~ 158 (840)
..+++|++|+|++|. +.. .++..+..+++|++|+|++|.... .++..+..+++|++|+++.+ .+.+ ++
T Consensus 181 ~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~ 258 (594)
T 2p1m_B 181 DTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LS 258 (594)
T ss_dssp TTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HH
T ss_pred hcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEcccccccCccchhhHHH-HH
Confidence 467799999999997 331 123334567999999999985333 37778889999999995544 4553 34
Q ss_pred ccccCCCCCcEE-EeeccccccccchhhhcCCCCCEEEccCCcCcccCC-cCCCCCCCcceeccccccccccCCc-cccC
Q 003199 159 ESILRLPKLRVL-QLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVP-QDLGQWSPLVVLDLSENKLSGPLPA-KVCS 235 (840)
Q Consensus 159 ~~~~~l~~L~~L-~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~l~~l~~L~~L~L~~N~l~~~~~~-~~~~ 235 (840)
..+.++++|+.| .+.+... ...+..+..+++|++|+|++|.++.... ..+..+++|+.|++++| ++..... ....
T Consensus 259 ~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~ 336 (594)
T 2p1m_B 259 VALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLAST 336 (594)
T ss_dssp HHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHH
T ss_pred HHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHh
Confidence 478899999999 4544433 2445566688999999999999774322 23567899999999998 5432222 2335
Q ss_pred CCCchhhhccc---------ccccccCCcccc-cccCCceEEeeCceeeccCCcccc-CCCcccEEecc--C----Cccc
Q 003199 236 RGKLQYFLVLQ---------NMFSGVLPDSLA-RCKNLLRFRVSNNHLEGSIPEGIL-SLPHVSIIDLS--Y----NSFS 298 (840)
Q Consensus 236 l~~L~~L~l~~---------n~~~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~L~--~----N~l~ 298 (840)
+++|+.|++.+ +.+++.....+. .+++|++|.+..|.+++..+..+. .+++|+.|+++ + |.++
T Consensus 337 ~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~ 416 (594)
T 2p1m_B 337 CKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLT 416 (594)
T ss_dssp CTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTT
T ss_pred CCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccccc
Confidence 78899998833 445443333333 489999999999999866555555 48999999999 4 5565
Q ss_pred ccC-----CcccCCCCCCceeecccceeeeccchhhcc-cCcccEEEcCCCccCCCCCCcc-cCccccchhcccCCccCC
Q 003199 299 GPI-----ANTVGNARNLSELFMQRNQISGFIPSEIYR-AISLVKIDLSDNLLSGPIPSGI-GNLKKLNLLMLQSNKLNS 371 (840)
Q Consensus 299 ~~~-----~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~ 371 (840)
+.. +..+..+++|+.|+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++
T Consensus 417 ~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~ 495 (594)
T 2p1m_B 417 LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGD 495 (594)
T ss_dssp CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCH
T ss_pred CCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcH
Confidence 322 22356789999999988 777666666766 8899999999999976555544 668999999999999965
Q ss_pred Ccch-hcccccCCCEEECcCccccccCCc
Q 003199 372 SIPN-SLSSLKSLNVLDLSNNLLTGYIPE 399 (840)
Q Consensus 372 ~~~~-~~~~l~~L~~L~l~~N~l~~~~p~ 399 (840)
..+. ....+++|+.|+|++|+++.....
T Consensus 496 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 524 (594)
T 2p1m_B 496 KALLANASKLETMRSLWMSSCSVSFGACK 524 (594)
T ss_dssp HHHHHTGGGGGGSSEEEEESSCCBHHHHH
T ss_pred HHHHHHHHhCCCCCEEeeeCCCCCHHHHH
Confidence 4444 445689999999999999644333
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=3.1e-24 Score=223.31 Aligned_cols=205 Identities=28% Similarity=0.326 Sum_probs=181.5
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcE
Q 003199 17 QNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTD 96 (840)
Q Consensus 17 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 96 (840)
.+.+.++++++.++ .+|..+. ++|+.|+|++| .+..++...|..+++|++|+|++|.++...+..|.++++|++
T Consensus 16 ~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n---~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~ 89 (270)
T 2o6q_A 16 NNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSN---KLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLET 89 (270)
T ss_dssp TTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSS---CCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCE
T ss_pred CCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCC---CCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCE
Confidence 46889999999999 6777664 68999999999 777888888999999999999999999777777899999999
Q ss_pred EEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccc
Q 003199 97 LELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNS 176 (840)
Q Consensus 97 L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 176 (840)
|+|++|.+++..+..|..+++|++|+|++|+ +....+..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|+
T Consensus 90 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~ 168 (270)
T 2o6q_A 90 LWVTDNKLQALPIGVFDQLVNLAELRLDRNQ-LKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQ 168 (270)
T ss_dssp EECCSSCCCCCCTTTTTTCSSCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCcCCcCCHhHcccccCCCEEECCCCc-cCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCc
Confidence 9999999997777888999999999999997 555556678999999999999999997777778999999999999999
Q ss_pred cccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceecccccccccc
Q 003199 177 LSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGP 228 (840)
Q Consensus 177 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 228 (840)
++++.+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++...
T Consensus 169 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 169 LKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 9988888899999999999999999977777788999999999999998743
No 327
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=8e-26 Score=257.26 Aligned_cols=195 Identities=16% Similarity=0.197 Sum_probs=150.4
Q ss_pred CccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEecCccce
Q 003199 529 TEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFSSLYCNL 608 (840)
Q Consensus 529 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 608 (840)
...+.||+|+||+||+|... ++.+|+|+....... ..........+.+.+|++++++++||||+++..++...+..+
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~ 415 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYR--DERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKR 415 (540)
T ss_dssp ---------CCEEEEEEECS-SCEEEEEEECCCTTS--CHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTE
T ss_pred CCCCEEeeCCCEEEEEEEEC-CCeEEEEEEeccccc--chhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccE
Confidence 44678999999999999554 789999987543211 111222334577899999999999999997766666777889
Q ss_pred EEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhhhhc
Q 003199 609 LVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQA 688 (840)
Q Consensus 609 lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 688 (840)
+||||+++++|.+++.. +..++.|+++||+|||+ ++|+||||||+|||++. .+||+|||+|+....
T Consensus 416 lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~ 481 (540)
T 3en9_A 416 IMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNL 481 (540)
T ss_dssp EEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCC
T ss_pred EEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCC
Confidence 99999999999999876 56899999999999999 99999999999999999 999999999987633
Q ss_pred cCCCC----cceecccccccccCcccccc--CCCCccccchhHHHHHHHHHhCCCCCC
Q 003199 689 RGGKD----STTTVIAGTYGYLAPEYAYS--SKATTKCDVYSFGVVLMELITGRKPVE 740 (840)
Q Consensus 689 ~~~~~----~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~slG~il~el~tg~~p~~ 740 (840)
..... .......||+.|||||++.. ..|+..+|+|+..+-..+.+.++.+|.
T Consensus 482 ~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 482 DEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 11000 01235689999999999876 568888999999999999988887764
No 328
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.3e-24 Score=224.28 Aligned_cols=206 Identities=20% Similarity=0.224 Sum_probs=154.7
Q ss_pred CCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcc
Q 003199 166 KLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVL 245 (840)
Q Consensus 166 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 245 (840)
+++.+++++|.++.+ |..+ .++|++|+|++|+++.+.+..|..+++|++|+|++|+++.
T Consensus 17 ~~~~l~~~~~~l~~i-p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~------------------ 75 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAI-PSNI--PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQT------------------ 75 (270)
T ss_dssp TTTEEECTTSCCSSC-CSCC--CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSC------------------
T ss_pred CCCEEEccCCCCCcc-CCCC--CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCe------------------
Confidence 456777777777643 3222 2467777777777766555566667777777777766653
Q ss_pred cccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeecc
Q 003199 246 QNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFI 325 (840)
Q Consensus 246 ~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 325 (840)
..+..|..+++|++|++++|++++..+..|..+++|+.|++++|++++..+..|+.+++|++|+|++|++++..
T Consensus 76 ------i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 149 (270)
T 2o6q_A 76 ------LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149 (270)
T ss_dssp ------CCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred ------eChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccC
Confidence 33445667778888888888887666666777888888888888888777777888888888888888888666
Q ss_pred chhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCC
Q 003199 326 PSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 326 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 398 (840)
+..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++.+..+
T Consensus 150 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 150 KGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred HhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 6667888888888888888887777778888888999999998887777778888889999999998876544
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=7.1e-25 Score=228.36 Aligned_cols=228 Identities=25% Similarity=0.275 Sum_probs=167.4
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcE
Q 003199 17 QNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTD 96 (840)
Q Consensus 17 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 96 (840)
.++..+++.++.+.+. ..+..+++|+.|++++| .+..++ .+..+++|++|++++|.+.+. ..+..+++|++
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~---~i~~~~--~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~ 89 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNS---DIKSVQ--GIQYLPNVRYLALGGNKLHDI--SALKELTNLTY 89 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTS---CCCCCT--TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCE
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCC---Cccccc--ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCE
Confidence 3455566667766633 23556777888888887 444443 367778888888888887652 46777888888
Q ss_pred EEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccc
Q 003199 97 LELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNS 176 (840)
Q Consensus 97 L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 176 (840)
|+|++|.+++..+..|..+++|++|+|++|+ +.+..+..|..+++|++|+|++|++++..+..|..+++|++|++++|+
T Consensus 90 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 168 (272)
T 3rfs_A 90 LILTGNQLQSLPNGVFDKLTNLKELVLVENQ-LQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQ 168 (272)
T ss_dssp EECTTSCCCCCCTTTTTTCTTCCEEECTTSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCccCccChhHhcCCcCCCEEECCCCc-CCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCC
Confidence 8888888886666677888888888888886 444445557788888888888888887666677788888888888888
Q ss_pred cccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcc
Q 003199 177 LSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDS 256 (840)
Q Consensus 177 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 256 (840)
+++..+..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++.+ .++.++.+.++.|.+.|.+|..
T Consensus 169 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 169 LQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCT
T ss_pred cCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCc
Confidence 887777777888888888888888887777777888888888888887763 3445677777777777776666
Q ss_pred ccccc
Q 003199 257 LARCK 261 (840)
Q Consensus 257 ~~~l~ 261 (840)
++.++
T Consensus 242 ~~~~~ 246 (272)
T 3rfs_A 242 AGSVA 246 (272)
T ss_dssp TSCBC
T ss_pred ccccC
Confidence 65544
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=4.6e-24 Score=223.91 Aligned_cols=204 Identities=24% Similarity=0.285 Sum_probs=177.5
Q ss_pred CCCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCC
Q 003199 12 DFSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNV 91 (840)
Q Consensus 12 ~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 91 (840)
.++.+++++++++++|+++ .+|..+. ++|+.|+|++| .+..+++..|..+++|+.|+|++|.+++..+. +.+
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N---~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l 76 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSEN---LLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTL 76 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTS---CCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCC---cCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCC
Confidence 4678899999999999999 6776664 68999999999 67777888899999999999999999865443 788
Q ss_pred CCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEE
Q 003199 92 TSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQ 171 (840)
Q Consensus 92 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (840)
++|++|+|++|+|+ .+|..+..+++|++|+|++|+ +.+..+..|.++++|++|+|++|++++..+..|..+++|+.|+
T Consensus 77 ~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~-l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 154 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNR-LTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (290)
T ss_dssp TTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSC-CCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCc-CcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEE
Confidence 99999999999998 778888999999999999997 4555557789999999999999999987777888999999999
Q ss_pred eeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceecccccccc
Q 003199 172 LYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLS 226 (840)
Q Consensus 172 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 226 (840)
|++|+|+.+++..|..+++|++|+|++|+++ .+|..+..+.+|+.|+|++|++.
T Consensus 155 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 155 LANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 9999999888888899999999999999998 67777888889999999999886
No 331
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=3.9e-24 Score=224.44 Aligned_cols=205 Identities=21% Similarity=0.264 Sum_probs=159.9
Q ss_pred ccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCch
Q 003199 161 ILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQ 240 (840)
Q Consensus 161 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 240 (840)
+.++++|+.+++++|.++.+++.. .++++.|+|++|++++..+..|..+++|+.|+|++|.|++.
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~---~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------------ 70 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL------------ 70 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCC---CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE------------
T ss_pred ccccCCccEEECCCCCCCcCCCCC---CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc------------
Confidence 456677777777777777444332 25677777777777766666677777777777777776632
Q ss_pred hhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccce
Q 003199 241 YFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQ 320 (840)
Q Consensus 241 ~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 320 (840)
.+ ...+++|++|++++|+++ .+|..+..+++|+.|++++|++++..+..|..+++|++|+|++|+
T Consensus 71 ------------~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 135 (290)
T 1p9a_G 71 ------------QV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE 135 (290)
T ss_dssp ------------EC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC
T ss_pred ------------cC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCC
Confidence 11 256778899999999988 778888888999999999999988888888889999999999999
Q ss_pred eeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCcccccc
Q 003199 321 ISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGY 396 (840)
Q Consensus 321 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 396 (840)
|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.+.
T Consensus 136 l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 136 LKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 98777777788889999999999998666667788889999999999997 6677777778899999999988754
No 332
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=6.6e-24 Score=221.05 Aligned_cols=213 Identities=25% Similarity=0.269 Sum_probs=189.5
Q ss_pred CCCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCC
Q 003199 12 DFSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNV 91 (840)
Q Consensus 12 ~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 91 (840)
.+..+++|+.|++++|.++ .++ .+..+++|++|+|++| .+..++ .+..+++|++|+|++|.+++..+..|+.+
T Consensus 36 ~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n---~l~~~~--~l~~l~~L~~L~L~~n~l~~~~~~~~~~l 108 (272)
T 3rfs_A 36 TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGN---KLHDIS--ALKELTNLTYLILTGNQLQSLPNGVFDKL 108 (272)
T ss_dssp CHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTS---CCCCCG--GGTTCTTCCEEECTTSCCCCCCTTTTTTC
T ss_pred ccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCC---CCCCch--hhcCCCCCCEEECCCCccCccChhHhcCC
Confidence 3567899999999999998 444 5889999999999999 455543 68899999999999999998888889999
Q ss_pred CCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEE
Q 003199 92 TSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQ 171 (840)
Q Consensus 92 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (840)
++|++|+|++|++++..+..|..+++|++|+|++|+ +.+..+..+..+++|++|+|++|++++..+..|..+++|++|+
T Consensus 109 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 187 (272)
T 3rfs_A 109 TNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQ-LQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCc-cCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEE
Confidence 999999999999998778889999999999999997 5555556689999999999999999988888889999999999
Q ss_pred eeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCc
Q 003199 172 LYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKL 239 (840)
Q Consensus 172 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 239 (840)
+++|++++..+..|..+++|++|+|++|++.+. +++|+.|+++.|.++|.+|..++.+...
T Consensus 188 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~~ 248 (272)
T 3rfs_A 188 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAPD 248 (272)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCGG
T ss_pred CCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCCC
Confidence 999999999888899999999999999998743 5579999999999999999988876543
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1e-25 Score=245.29 Aligned_cols=261 Identities=18% Similarity=0.208 Sum_probs=169.1
Q ss_pred eecccCccccccCCcccCCCCCCCeeeccCCcccccCC----ccccCCC-CCcEEEeeccccccccchhhhcC-----CC
Q 003199 121 LELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIP----ESILRLP-KLRVLQLYNNSLSGEISSVIANS-----TT 190 (840)
Q Consensus 121 L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~~ 190 (840)
++|+.|. +.+.+|..+...++|++|+|++|.+++..+ ..|..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 3 ~~ls~n~-~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHP-GSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCT-TCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccc-chHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 5666665 555666666666668888888888876555 6667777 78888888888777666666664 77
Q ss_pred CCEEEccCCcCcccCCcCC----CCC-CCcceeccccccccccCCccccCCCCchhhhcccccccccCCccccc-ccCCc
Q 003199 191 LTMLSLYDNSLTGEVPQDL----GQW-SPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLAR-CKNLL 264 (840)
Q Consensus 191 L~~L~L~~N~l~~~~~~~l----~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~-l~~L~ 264 (840)
|++|+|++|++++..+..+ ..+ ++|++|+|++|++++..+..++ ..+.. .++|+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~--------------------~~l~~~~~~L~ 141 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFK--------------------QAFSNLPASIT 141 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH--------------------HHHTTSCTTCC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHH--------------------HHHHhCCCcee
Confidence 8888888887775554433 333 6777777777777654333221 12223 24677
Q ss_pred eEEeeCceeeccCC----ccccCCC-cccEEeccCCcccccCCcccC----CC-CCCceeecccceeeec----cchhhc
Q 003199 265 RFRVSNNHLEGSIP----EGILSLP-HVSIIDLSYNSFSGPIANTVG----NA-RNLSELFMQRNQISGF----IPSEIY 330 (840)
Q Consensus 265 ~L~l~~N~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~----~l-~~L~~L~L~~N~l~~~----~p~~~~ 330 (840)
+|+|++|.+++..+ ..+..++ +|+.|+|++|++++..+..+. .. ++|++|+|++|+|++. ++..+.
T Consensus 142 ~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~ 221 (362)
T 3goz_A 142 SLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFS 221 (362)
T ss_dssp EEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHH
T ss_pred EEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHh
Confidence 77777777764332 2334444 777788888877766554333 33 5788888888887752 444555
Q ss_pred cc-CcccEEEcCCCccCCCCC----CcccCccccchhcccCCccCCCc-------chhcccccCCCEEECcCccccccCC
Q 003199 331 RA-ISLVKIDLSDNLLSGPIP----SGIGNLKKLNLLMLQSNKLNSSI-------PNSLSSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 331 ~l-~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~-------~~~~~~l~~L~~L~l~~N~l~~~~p 398 (840)
.. ++|+.|+|++|++++..+ ..+..+++|+.|+|++|.+.+.. +..+..+++|+.||+++|++.+..|
T Consensus 222 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 222 SIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred cCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 53 478888888888875433 33456677888888888854433 3356677778888888888876655
Q ss_pred chhh
Q 003199 399 ESLC 402 (840)
Q Consensus 399 ~~~~ 402 (840)
..+.
T Consensus 302 ~~~~ 305 (362)
T 3goz_A 302 IPIS 305 (362)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=8.7e-24 Score=224.74 Aligned_cols=228 Identities=21% Similarity=0.193 Sum_probs=147.4
Q ss_pred CCCcEEEeeccccccccch---hhhcCCCCCEEEccCCcCcccCCcCC--CCCCCcceeccccccccccCCccccCCCCc
Q 003199 165 PKLRVLQLYNNSLSGEISS---VIANSTTLTMLSLYDNSLTGEVPQDL--GQWSPLVVLDLSENKLSGPLPAKVCSRGKL 239 (840)
Q Consensus 165 ~~L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~L~~N~l~~~~~~~l--~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 239 (840)
..++.|.+.++.++..... .+..+++|++|+|++|.+.+..|..+ ..+++|++|+|++|++++..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~------- 136 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWL------- 136 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSH-------
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhh-------
Confidence 3467777777776532111 12345679999999999988888887 88899999999999888543310
Q ss_pred hhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCccccc---C-CcccCCCCCCceee
Q 003199 240 QYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGP---I-ANTVGNARNLSELF 315 (840)
Q Consensus 240 ~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~-~~~~~~l~~L~~L~ 315 (840)
....+..+++|++|++++|++.+..+..|..+++|++|+|++|++.+. . +..++.+++|++|+
T Consensus 137 -------------~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~ 203 (310)
T 4glp_A 137 -------------AELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLA 203 (310)
T ss_dssp -------------HHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCB
T ss_pred -------------HHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEE
Confidence 001233566777777777777666666677777777777777776531 1 22345677777777
Q ss_pred cccceeeeccch----hhcccCcccEEEcCCCccCCCCCCcccCc---cccchhcccCCccCCCcchhcccccCCCEEEC
Q 003199 316 MQRNQISGFIPS----EIYRAISLVKIDLSDNLLSGPIPSGIGNL---KKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDL 388 (840)
Q Consensus 316 L~~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 388 (840)
|++|+++. ++. .+..+++|++|+|++|++++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|++|||
T Consensus 204 Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~L 279 (310)
T 4glp_A 204 LRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDL 279 (310)
T ss_dssp CCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEEC
T ss_pred CCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEEC
Confidence 77777752 222 23556777777777777776666666555 57777777777776 4555553 67777777
Q ss_pred cCccccccCCchhhcc-CCCeEEccCCCCcC
Q 003199 389 SNNLLTGYIPESLCEL-LPNSINFSNNRLSG 418 (840)
Q Consensus 389 ~~N~l~~~~p~~~~~~-~~~~l~l~~N~l~~ 418 (840)
++|+|++. |. +..+ .++.|++++|+++.
T Consensus 280 s~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 280 SSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 77777752 22 2222 44677777777753
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1e-24 Score=237.27 Aligned_cols=255 Identities=17% Similarity=0.219 Sum_probs=127.1
Q ss_pred EecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCc----ccccccc-cccEEEecCccccccCCccccCC-----
Q 003199 22 LDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPE----SSIFRLT-KLRIMVLATCALHGQIPASIGNV----- 91 (840)
Q Consensus 22 L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~----~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l----- 91 (840)
++|+.|.+++.+|..+....+|++|+|++| .+...+. ..|..++ +|++|+|++|.+....+..+..+
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n---~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~ 79 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLN---NLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIP 79 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTS---CGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCC---CCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccC
Confidence 455556665555555544455666666666 4444444 4445555 55555555555554444444443
Q ss_pred CCCcEEEccCCcccccCchhhhc----C-CCCCeeecccCccccccCCcc----cCC-CCCCCeeeccCCcccccCC---
Q 003199 92 TSLTDLELTGNFITGHIPPEIGL----L-KNLRQLELYYNQQLAGTIPEE----LGN-LTELTDLDMSVNHLSGKIP--- 158 (840)
Q Consensus 92 ~~L~~L~L~~n~i~~~~p~~~~~----l-~~L~~L~L~~n~~~~~~~p~~----l~~-l~~L~~L~L~~n~l~~~~~--- 158 (840)
++|++|+|++|.+++..+..+.. + ++|++|+|++|+ +.+..+.. +.. .++|++|+|++|.+++..+
T Consensus 80 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~-l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 158 (362)
T 3goz_A 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWND-FSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL 158 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSC-GGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH
T ss_pred CCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCc-CCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH
Confidence 55666666666665444443333 2 556666666555 22222211 222 2456666666666653222
Q ss_pred -ccccCCC-CCcEEEeeccccccccchhhh----cC-CCCCEEEccCCcCccc----CCcCCCC-CCCcceecccccccc
Q 003199 159 -ESILRLP-KLRVLQLYNNSLSGEISSVIA----NS-TTLTMLSLYDNSLTGE----VPQDLGQ-WSPLVVLDLSENKLS 226 (840)
Q Consensus 159 -~~~~~l~-~L~~L~L~~N~l~~~~~~~~~----~l-~~L~~L~L~~N~l~~~----~~~~l~~-l~~L~~L~L~~N~l~ 226 (840)
..+..++ +|++|+|++|++++..+..+. .+ ++|++|+|++|+|+.. ++..+.. .++|++|+|++|+++
T Consensus 159 ~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 238 (362)
T 3goz_A 159 IQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLH 238 (362)
T ss_dssp HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCC
T ss_pred HHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCC
Confidence 2223333 566666666666544443322 23 3666666666665532 2222322 235666666666555
Q ss_pred ccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeec-------cCCccccCCCcccEEeccCCcccc
Q 003199 227 GPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEG-------SIPEGILSLPHVSIIDLSYNSFSG 299 (840)
Q Consensus 227 ~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~-------~~~~~~~~l~~L~~L~L~~N~l~~ 299 (840)
+..+..+ ...+..+++|+.|++++|.+.+ .++..+..+++|+.||+++|++.+
T Consensus 239 ~~~~~~l--------------------~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 239 GPSLENL--------------------KLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp CCCHHHH--------------------HHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred cHHHHHH--------------------HHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 3322111 1223444555556666555321 223345566667777777776664
Q ss_pred c
Q 003199 300 P 300 (840)
Q Consensus 300 ~ 300 (840)
.
T Consensus 299 ~ 299 (362)
T 3goz_A 299 S 299 (362)
T ss_dssp G
T ss_pred c
Confidence 4
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=1.5e-23 Score=213.95 Aligned_cols=178 Identities=20% Similarity=0.247 Sum_probs=104.2
Q ss_pred CCCEEeCCCCCCCccCCCCcccccccccccEEEecCcc-ccccCCccccCCCCCcEEEccC-CcccccCchhhhcCCCCC
Q 003199 42 NLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCA-LHGQIPASIGNVTSLTDLELTG-NFITGHIPPEIGLLKNLR 119 (840)
Q Consensus 42 ~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~-n~i~~~~p~~~~~l~~L~ 119 (840)
+|++|+|++| .+..+++..|..+++|++|++++|. ++++.+..|.++++|++|+|++ |+++...+..|..+++|+
T Consensus 32 ~l~~L~l~~n---~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~ 108 (239)
T 2xwt_C 32 STQTLKLIET---HLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLK 108 (239)
T ss_dssp TCCEEEEESC---CCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCC
T ss_pred cccEEEEeCC---cceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCC
Confidence 5666666666 4555555556666666666666664 5555555566666666666665 666654455566666666
Q ss_pred eeecccCccccccCCcccCCCCCCC---eeeccCC-cccccCCccccCCCCCc-EEEeeccccccccchhhhcCCCCCEE
Q 003199 120 QLELYYNQQLAGTIPEELGNLTELT---DLDMSVN-HLSGKIPESILRLPKLR-VLQLYNNSLSGEISSVIANSTTLTML 194 (840)
Q Consensus 120 ~L~L~~n~~~~~~~p~~l~~l~~L~---~L~L~~n-~l~~~~~~~~~~l~~L~-~L~L~~N~l~~~~~~~~~~l~~L~~L 194 (840)
+|++++|+ ...+|. +..+++|+ +|++++| .++.+.+..|..+++|+ .|++++|+++.+.+..|.. ++|++|
T Consensus 109 ~L~l~~n~--l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L 184 (239)
T 2xwt_C 109 FLGIFNTG--LKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAV 184 (239)
T ss_dssp EEEEEEEC--CCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEE
T ss_pred EEeCCCCC--Cccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEE
Confidence 66666665 222444 55555555 6666666 66655555566666666 6666666666444444444 566666
Q ss_pred EccCCc-CcccCCcCCCCC-CCcceecccccccc
Q 003199 195 SLYDNS-LTGEVPQDLGQW-SPLVVLDLSENKLS 226 (840)
Q Consensus 195 ~L~~N~-l~~~~~~~l~~l-~~L~~L~L~~N~l~ 226 (840)
+|++|+ ++.+.+..|..+ ++|+.|+|++|+++
T Consensus 185 ~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 185 YLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT 218 (239)
T ss_dssp ECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC
T ss_pred EcCCCCCcccCCHHHhhccccCCcEEECCCCccc
Confidence 666663 655545555555 66666666666655
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=4.7e-23 Score=210.31 Aligned_cols=206 Identities=17% Similarity=0.220 Sum_probs=154.0
Q ss_pred cccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCc-CcccCCcCCCCCCCcceecccc-ccccccC
Q 003199 152 HLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNS-LTGEVPQDLGQWSPLVVLDLSE-NKLSGPL 229 (840)
Q Consensus 152 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~L~~-N~l~~~~ 229 (840)
.++ .+|. +. ++|++|++++|+++++.+..|.++++|++|+|++|+ ++.+.+..|.++++|++|+|++ |++++
T Consensus 22 ~l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~-- 95 (239)
T 2xwt_C 22 DIQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTY-- 95 (239)
T ss_dssp SCS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCE--
T ss_pred Ccc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeE--
Confidence 355 3454 33 378888888888887777777788888888888886 7766666777777777777777 77763
Q ss_pred CccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCccc---EEeccCC-cccccCCccc
Q 003199 230 PAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVS---IIDLSYN-SFSGPIANTV 305 (840)
Q Consensus 230 ~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~---~L~L~~N-~l~~~~~~~~ 305 (840)
..+..|..+++|++|++++|++++ +|. +..+++|+ .|++++| ++++..+..|
T Consensus 96 ----------------------i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~ 151 (239)
T 2xwt_C 96 ----------------------IDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAF 151 (239)
T ss_dssp ----------------------ECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTT
T ss_pred ----------------------cCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccc
Confidence 344567777888888888888874 665 77777777 8888888 8887777788
Q ss_pred CCCCCCc-eeecccceeeeccchhhcccCcccEEEcCCCc-cCCCCCCcccCc-cccchhcccCCccCCCcchhcccccC
Q 003199 306 GNARNLS-ELFMQRNQISGFIPSEIYRAISLVKIDLSDNL-LSGPIPSGIGNL-KKLNLLMLQSNKLNSSIPNSLSSLKS 382 (840)
Q Consensus 306 ~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~ 382 (840)
..+++|+ .|++++|+++ .+|...+..++|+.|+|++|+ +++..+..|..+ ++|+.|+|++|++++..+. .+++
T Consensus 152 ~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~ 227 (239)
T 2xwt_C 152 QGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEH 227 (239)
T ss_dssp TTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTT
T ss_pred cchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---Hhcc
Confidence 8888888 8888888888 444444444788888888885 886666778888 8888888888888754433 5677
Q ss_pred CCEEECcCc
Q 003199 383 LNVLDLSNN 391 (840)
Q Consensus 383 L~~L~l~~N 391 (840)
|+.|+++++
T Consensus 228 L~~L~l~~~ 236 (239)
T 2xwt_C 228 LKELIARNT 236 (239)
T ss_dssp CSEEECTTC
T ss_pred CceeeccCc
Confidence 888888876
No 338
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=5.6e-23 Score=211.31 Aligned_cols=181 Identities=19% Similarity=0.233 Sum_probs=146.6
Q ss_pred CCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEe
Q 003199 189 TTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRV 268 (840)
Q Consensus 189 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l 268 (840)
...++++++++.++ .+|..+. ++|+.|+|++|.+++ ..+..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~------------------------~~~~~~~~l~~L~~L~L 66 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLAT------------------------LSDATFRGLTKLTWLNL 66 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCC------------------------CCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCc------------------------cCHhHhcCcccCCEEEC
Confidence 35677888888887 4555544 477788888887764 34445667778888888
Q ss_pred eCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCC
Q 003199 269 SNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGP 348 (840)
Q Consensus 269 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 348 (840)
++|.+++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..+..+++|+.|+|++|+|++.
T Consensus 67 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 146 (251)
T 3m19_A 67 DYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCcc
Confidence 88888877777778888888888888888877778888888888888888888877666778888999999999999877
Q ss_pred CCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCcccccc
Q 003199 349 IPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGY 396 (840)
Q Consensus 349 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 396 (840)
.+..|+.+++|+.|+|++|++++..+..|..+++|+.|+|++|++++.
T Consensus 147 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 777888999999999999999988888899999999999999999876
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.1e-25 Score=245.24 Aligned_cols=249 Identities=20% Similarity=0.222 Sum_probs=160.7
Q ss_pred cccCCcccCCCCCCCeeeccCCcccccCC----ccccCCCCCcEEEeecccc---ccccchhh-------hcCCCCCEEE
Q 003199 130 AGTIPEELGNLTELTDLDMSVNHLSGKIP----ESILRLPKLRVLQLYNNSL---SGEISSVI-------ANSTTLTMLS 195 (840)
Q Consensus 130 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~L~~N~l---~~~~~~~~-------~~l~~L~~L~ 195 (840)
...++..+..+++|++|+|++|.++...+ ..+..+++|++|+|++|.+ ++..|..+ ..+++|++|+
T Consensus 21 ~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~ 100 (386)
T 2ca6_A 21 EKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVR 100 (386)
T ss_dssp HHTTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEE
T ss_pred HHHHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEE
Confidence 34455667777888888888888876533 3366778888888887643 33334333 5677778888
Q ss_pred ccCCcCcc----cCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccc---------cC
Q 003199 196 LYDNSLTG----EVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARC---------KN 262 (840)
Q Consensus 196 L~~N~l~~----~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l---------~~ 262 (840)
|++|+++. .++..+..+++|++|+|++|.+++..+..+. ..+..+ ++
T Consensus 101 Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~--------------------~~l~~l~~~~~~~~~~~ 160 (386)
T 2ca6_A 101 LSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIA--------------------RALQELAVNKKAKNAPP 160 (386)
T ss_dssp CCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHH--------------------HHHHHHHHHHHHHTCCC
T ss_pred CCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHH--------------------HHHHHHhhhhhcccCCC
Confidence 88777775 3455666677777777777777543322221 112222 67
Q ss_pred CceEEeeCceee-ccCC---ccccCCCcccEEeccCCcccc-----cCCcccCCCCCCceeecccceee----eccchhh
Q 003199 263 LLRFRVSNNHLE-GSIP---EGILSLPHVSIIDLSYNSFSG-----PIANTVGNARNLSELFMQRNQIS----GFIPSEI 329 (840)
Q Consensus 263 L~~L~l~~N~l~-~~~~---~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~L~~N~l~----~~~p~~~ 329 (840)
|++|++++|+++ +.++ ..+..+++|+.|+|++|+++. ..+..+..+++|+.|+|++|.++ ..+|..+
T Consensus 161 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l 240 (386)
T 2ca6_A 161 LRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL 240 (386)
T ss_dssp CCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHG
T ss_pred CcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHH
Confidence 777777777775 2333 345566777777777777762 23335667777777777777775 4566667
Q ss_pred cccCcccEEEcCCCccCCC----CCCcc--cCccccchhcccCCccCC----Ccchhc-ccccCCCEEECcCccccccCC
Q 003199 330 YRAISLVKIDLSDNLLSGP----IPSGI--GNLKKLNLLMLQSNKLNS----SIPNSL-SSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 330 ~~l~~L~~L~Ls~N~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~~~~~-~~l~~L~~L~l~~N~l~~~~p 398 (840)
..+++|+.|+|++|++++. ++..+ +.+++|+.|+|++|++++ .+|..+ .++++|+.|+|++|++++..|
T Consensus 241 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 241 KSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp GGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred ccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 7777777777777777654 34444 336777777777777765 356655 556777777777777775543
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=2.3e-25 Score=245.03 Aligned_cols=248 Identities=21% Similarity=0.231 Sum_probs=120.2
Q ss_pred cCCccccCCCCCcEEEccCCcccccCch----hhhcCCCCCeeecccCc--cccccCCccc-------CCCCCCCeeecc
Q 003199 83 QIPASIGNVTSLTDLELTGNFITGHIPP----EIGLLKNLRQLELYYNQ--QLAGTIPEEL-------GNLTELTDLDMS 149 (840)
Q Consensus 83 ~~~~~~~~l~~L~~L~L~~n~i~~~~p~----~~~~l~~L~~L~L~~n~--~~~~~~p~~l-------~~l~~L~~L~L~ 149 (840)
.++..+..+++|++|+|++|.|++..+. .|..+++|++|+|++|. .+.+.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 3445555666667777777766654332 34456666666666652 1222333322 455666666666
Q ss_pred CCcccc----cCCccccCCCCCcEEEeeccccccccchhhhc----C---------CCCCEEEccCCcCcc-cCC---cC
Q 003199 150 VNHLSG----KIPESILRLPKLRVLQLYNNSLSGEISSVIAN----S---------TTLTMLSLYDNSLTG-EVP---QD 208 (840)
Q Consensus 150 ~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~----l---------~~L~~L~L~~N~l~~-~~~---~~ 208 (840)
+|.++. .++..+..+++|++|+|++|.++...+..+.. + ++|++|+|++|+++. ..+ ..
T Consensus 103 ~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 182 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 182 (386)
T ss_dssp SCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHH
Confidence 666654 24445555666666666666665333322222 2 455555555555441 111 12
Q ss_pred CCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCccc
Q 003199 209 LGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVS 288 (840)
Q Consensus 209 l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 288 (840)
+..+++|++|+|++|+++... +.. ..+..+..+++|+
T Consensus 183 l~~~~~L~~L~L~~n~l~~~g-------------------~~~------------------------l~~~~l~~~~~L~ 219 (386)
T 2ca6_A 183 FQSHRLLHTVKMVQNGIRPEG-------------------IEH------------------------LLLEGLAYCQELK 219 (386)
T ss_dssp HHHCTTCCEEECCSSCCCHHH-------------------HHH------------------------HHHTTGGGCTTCC
T ss_pred HHhCCCcCEEECcCCCCCHhH-------------------HHH------------------------HHHHHhhcCCCcc
Confidence 233344444444444433100 000 1222344444444
Q ss_pred EEeccCCccc----ccCCcccCCCCCCceeecccceeeec----cchhhc--ccCcccEEEcCCCccCC----CCCCcc-
Q 003199 289 IIDLSYNSFS----GPIANTVGNARNLSELFMQRNQISGF----IPSEIY--RAISLVKIDLSDNLLSG----PIPSGI- 353 (840)
Q Consensus 289 ~L~L~~N~l~----~~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~- 353 (840)
.|+|++|.++ ..++..+..+++|+.|+|++|++++. +|..+. .+++|+.|+|++|.+++ .+|..+
T Consensus 220 ~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~ 299 (386)
T 2ca6_A 220 VLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVID 299 (386)
T ss_dssp EEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHH
T ss_pred EEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHH
Confidence 4444444443 23334444455555555555555433 233332 25556666666666654 244444
Q ss_pred cCccccchhcccCCccCCCc
Q 003199 354 GNLKKLNLLMLQSNKLNSSI 373 (840)
Q Consensus 354 ~~l~~L~~L~Ls~N~l~~~~ 373 (840)
.++++|+.|+|++|++++..
T Consensus 300 ~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 300 EKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp HHCTTCCEEECTTSBSCTTS
T ss_pred hcCCCceEEEccCCcCCcch
Confidence 44566666666666666544
No 341
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=4.9e-23 Score=218.91 Aligned_cols=202 Identities=21% Similarity=0.208 Sum_probs=90.3
Q ss_pred CCcEEEccCCcccccCchhh--hcCCCCCeeecccCccccccCC----cccCCCCCCCeeeccCCcccccCCccccCCCC
Q 003199 93 SLTDLELTGNFITGHIPPEI--GLLKNLRQLELYYNQQLAGTIP----EELGNLTELTDLDMSVNHLSGKIPESILRLPK 166 (840)
Q Consensus 93 ~L~~L~L~~n~i~~~~p~~~--~~l~~L~~L~L~~n~~~~~~~p----~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 166 (840)
+|++|+|++|.+++..|..+ ..+++|++|+|++|+ +.+..+ ..+..+++|++|+|++|++.+..+..|..+++
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~-i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVS-WATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCC-CSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeeccc-ccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 34555555555444444444 444555555555444 222111 12234455555555555555444455555555
Q ss_pred CcEEEeeccccccc---c-chhhhcCCCCCEEEccCCcCcccCCc----CCCCCCCcceeccccccccccCCccccCCCC
Q 003199 167 LRVLQLYNNSLSGE---I-SSVIANSTTLTMLSLYDNSLTGEVPQ----DLGQWSPLVVLDLSENKLSGPLPAKVCSRGK 238 (840)
Q Consensus 167 L~~L~L~~N~l~~~---~-~~~~~~l~~L~~L~L~~N~l~~~~~~----~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 238 (840)
|++|+|++|++.+. . +..+..+++|++|+|++|+++. ++. .+..+++|++|+|++|++++..|..+..+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~-- 247 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC-- 247 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC--
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc--
Confidence 55555555554321 1 1112345555555555555542 111 12344555555555555554333222211
Q ss_pred chhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeeccc
Q 003199 239 LQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQR 318 (840)
Q Consensus 239 L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 318 (840)
..+++|++|++++|+|+ .+|..+. ++|+.|+|++|++++. |. +..+++|+.|+|++
T Consensus 248 -------------------~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~ 303 (310)
T 4glp_A 248 -------------------MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDG 303 (310)
T ss_dssp -------------------CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSS
T ss_pred -------------------cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcC
Confidence 11134444444444444 3343332 4455555555555433 11 34445555555555
Q ss_pred ceee
Q 003199 319 NQIS 322 (840)
Q Consensus 319 N~l~ 322 (840)
|+++
T Consensus 304 N~l~ 307 (310)
T 4glp_A 304 NPFL 307 (310)
T ss_dssp TTTS
T ss_pred CCCC
Confidence 5544
No 342
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=7.6e-24 Score=228.33 Aligned_cols=255 Identities=18% Similarity=0.229 Sum_probs=160.3
Q ss_pred CCEEecCCCcCcccCCccccCC--CCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcccccc-CCccccCCCCCc
Q 003199 19 LRRLDLSNNLFTGQFPLSVFNL--TNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQ-IPASIGNVTSLT 95 (840)
Q Consensus 19 L~~L~Ls~n~i~~~~p~~~~~l--~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~ 95 (840)
++.|++++|.+. |..+..+ ++++.|++++| .+...+.. +..+++|+.|+|++|.+... ++..+..+++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n---~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~ 121 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRS---FMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQ 121 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTC---EECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCS
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCc---cccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCC
Confidence 667777777665 4556666 77777777777 44444443 44577777777777776644 566667777777
Q ss_pred EEEccCCcccccCchhhhcCCCCCeeecccCccccc-cCCcccCCCCCCCeeeccCC-ccccc-CCccccCCC-CCcEEE
Q 003199 96 DLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAG-TIPEELGNLTELTDLDMSVN-HLSGK-IPESILRLP-KLRVLQ 171 (840)
Q Consensus 96 ~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~-~~p~~l~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~-~L~~L~ 171 (840)
+|+|++|.+++..+..+..+++|++|+|++|..+.+ .++..+..+++|++|+|++| .+++. ++..+..++ +|++|+
T Consensus 122 ~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~ 201 (336)
T 2ast_B 122 NLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLN 201 (336)
T ss_dssp EEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEE
T ss_pred EEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEE
Confidence 777777777766666777777777777777732332 34555666777777777777 66643 345566667 777777
Q ss_pred eecc--ccc-cccchhhhcCCCCCEEEccCCc-CcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccc
Q 003199 172 LYNN--SLS-GEISSVIANSTTLTMLSLYDNS-LTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQN 247 (840)
Q Consensus 172 L~~N--~l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n 247 (840)
|++| .++ +..+..+..+++|++|+|++|. +++..+..+..+++|+.|+|++|. +..+.
T Consensus 202 l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~---------------- 263 (336)
T 2ast_B 202 LSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPE---------------- 263 (336)
T ss_dssp CCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGG----------------
T ss_pred eCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHH----------------
Confidence 7777 343 2345556667777777777776 555555566666777777777764 11111
Q ss_pred cccccCCcccccccCCceEEeeCceeeccCCccccCC-CcccEEeccCCcccccCCcccCC
Q 003199 248 MFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSL-PHVSIIDLSYNSFSGPIANTVGN 307 (840)
Q Consensus 248 ~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~ 307 (840)
....+..+++|++|++++| ++ ...+..+ ..|..|++++|++++..|..++.
T Consensus 264 -----~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 264 -----TLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp -----GGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred -----HHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 1124566777777777777 32 2233333 23666667777777777766654
No 343
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1.5e-22 Score=214.50 Aligned_cols=194 Identities=26% Similarity=0.342 Sum_probs=132.5
Q ss_pred CCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCC
Q 003199 13 FSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVT 92 (840)
Q Consensus 13 ~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 92 (840)
++.+++|++|++++|.++ .+| .+..+++|++|+|++| .+..++. +..+++|++|+|++|.+++. ..+..++
T Consensus 37 ~~~l~~L~~L~l~~~~i~-~l~-~~~~l~~L~~L~L~~n---~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~ 107 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT-TIE-GVQYLNNLIGLELKDN---QITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQ 107 (308)
T ss_dssp HHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSS---CCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCT
T ss_pred HHHcCCcCEEEeeCCCcc-Cch-hhhccCCCCEEEccCC---cCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCC
Confidence 445677777777777777 444 4777777777777777 4555554 77777777777777777643 3577777
Q ss_pred CCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEe
Q 003199 93 SLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQL 172 (840)
Q Consensus 93 ~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 172 (840)
+|++|+|++|++++ ++ .+..+++|++|++++|+ +. .++. +..+++|++|+|++|.+++..+ +..+++|+.|++
T Consensus 108 ~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~l~~n~-l~-~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 180 (308)
T 1h6u_A 108 SIKTLDLTSTQITD-VT-PLAGLSNLQVLYLDLNQ-IT-NISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKA 180 (308)
T ss_dssp TCCEEECTTSCCCC-CG-GGTTCTTCCEEECCSSC-CC-CCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCC-ch-hhcCCCCCCEEECCCCc-cC-cCcc-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEEC
Confidence 77777777777774 33 27777777777777776 22 2332 6677777777777777774332 677777777777
Q ss_pred eccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceecccccccc
Q 003199 173 YNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLS 226 (840)
Q Consensus 173 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 226 (840)
++|++++..+ +..+++|++|+|++|++++.. .+..+++|+.|+|++|+++
T Consensus 181 ~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 181 DDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred CCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeee
Confidence 7777765443 667777777777777777543 3667777777777777776
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=6.9e-24 Score=228.67 Aligned_cols=255 Identities=17% Similarity=0.167 Sum_probs=163.7
Q ss_pred CCcEEEccCCcccccCchhhhcC--CCCCeeecccCccccccCCcccCCCCCCCeeeccCCccccc-CCccccCCCCCcE
Q 003199 93 SLTDLELTGNFITGHIPPEIGLL--KNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGK-IPESILRLPKLRV 169 (840)
Q Consensus 93 ~L~~L~L~~n~i~~~~p~~~~~l--~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~ 169 (840)
.++.|++++|.+. +..+..+ ++++.|++++|. +.+. +..+..+++|++|+|++|.+++. ++..+..+++|++
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~-l~~~-~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~ 122 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSF-MDQP-LAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQN 122 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCE-ECSC-CCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCcc-cccc-chhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCE
Confidence 3667777777765 4556666 777777777776 3333 33355677777777777777654 5666777777777
Q ss_pred EEeeccccccccchhhhcCCCCCEEEccCC-cCccc-CCcCCCCCCCcceeccccc-cccccCCccccCCCCchhhhccc
Q 003199 170 LQLYNNSLSGEISSVIANSTTLTMLSLYDN-SLTGE-VPQDLGQWSPLVVLDLSEN-KLSGPLPAKVCSRGKLQYFLVLQ 246 (840)
Q Consensus 170 L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N-~l~~~-~~~~l~~l~~L~~L~L~~N-~l~~~~~~~~~~l~~L~~L~l~~ 246 (840)
|+|++|.+++..+..+..+++|++|+|++| .+++. ++..+..+++|++|+|++| .+++.
T Consensus 123 L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~------------------ 184 (336)
T 2ast_B 123 LSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK------------------ 184 (336)
T ss_dssp EECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH------------------
T ss_pred EeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH------------------
Confidence 777777777666667777777777777777 56532 3444556677777777777 66532
Q ss_pred ccccccCCccccccc-CCceEEeeCc--eee-ccCCccccCCCcccEEeccCCc-ccccCCcccCCCCCCceeecccce-
Q 003199 247 NMFSGVLPDSLARCK-NLLRFRVSNN--HLE-GSIPEGILSLPHVSIIDLSYNS-FSGPIANTVGNARNLSELFMQRNQ- 320 (840)
Q Consensus 247 n~~~~~~~~~~~~l~-~L~~L~l~~N--~l~-~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~L~~N~- 320 (840)
.++..+..++ +|++|++++| .++ +.++..+..+++|+.|++++|. +++..+..+..+++|++|+|++|.
T Consensus 185 -----~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~ 259 (336)
T 2ast_B 185 -----HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYD 259 (336)
T ss_dssp -----HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTT
T ss_pred -----HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCC
Confidence 1233455556 6666666666 333 2344555566777777777776 555555666677777777777774
Q ss_pred eeeccchhhcccCcccEEEcCCCccCCCCCCcccCc-cccchhcccCCccCCCcchhccc
Q 003199 321 ISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNL-KKLNLLMLQSNKLNSSIPNSLSS 379 (840)
Q Consensus 321 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~ 379 (840)
+.......+..+++|+.|++++| ++ ...+..+ ..+..|++++|++++..|..++.
T Consensus 260 ~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 260 IIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp CCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 32222235667778888888877 32 2234444 34777778888888877776654
No 345
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=1.2e-21 Score=201.47 Aligned_cols=178 Identities=23% Similarity=0.258 Sum_probs=98.8
Q ss_pred CCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEE
Q 003199 18 NLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDL 97 (840)
Q Consensus 18 ~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 97 (840)
+.++++++++.++ .+|..+. ++|+.|+|++| .+..+++..|..+++|++|+|++|.+.+..+..|..+++|++|
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n---~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 88 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQST---GLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTL 88 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTS---CCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCC---CcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEE
Confidence 4566777777776 5555443 45666666666 4444554455555555555555555554444445555555555
Q ss_pred EccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeecccc
Q 003199 98 ELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSL 177 (840)
Q Consensus 98 ~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 177 (840)
+|++|++++..+.. |..+++|++|+|++|+|++..+..|..+++|++|+|++|+|
T Consensus 89 ~L~~n~l~~~~~~~-------------------------~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 143 (251)
T 3m19_A 89 GLANNQLASLPLGV-------------------------FDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQL 143 (251)
T ss_dssp ECTTSCCCCCCTTT-------------------------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcccccChhH-------------------------hcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcC
Confidence 55555555433344 44555555555555555544444455555555555555555
Q ss_pred ccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceecccccccc
Q 003199 178 SGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLS 226 (840)
Q Consensus 178 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 226 (840)
+++.+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++.
T Consensus 144 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 144 QSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCcee
Confidence 5555555555566666666666665555555555666666666666655
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=8.9e-22 Score=212.90 Aligned_cols=241 Identities=17% Similarity=0.158 Sum_probs=145.4
Q ss_pred CeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeecccccc-ccchhhhcCCCCCE-EEc
Q 003199 119 RQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSG-EISSVIANSTTLTM-LSL 196 (840)
Q Consensus 119 ~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~-L~L 196 (840)
+.++.++++ ...+|..+ .+++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+ +.+++|.++++|.+ +.+
T Consensus 12 ~~v~C~~~~--Lt~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESK--VTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTT--CCSCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCC--CCccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 455666655 33556544 2466777777777765555566777777777777776643 33445666666554 444
Q ss_pred cCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeC-ceeec
Q 003199 197 YDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSN-NHLEG 275 (840)
Q Consensus 197 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~-N~l~~ 275 (840)
+.|+++.+.+..|..+++|++|++++|+++...+. .+....++..|++.+ |++..
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~------------------------~~~~~~~l~~l~l~~~~~i~~ 143 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDV------------------------HKIHSLQKVLLDIQDNINIHT 143 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCC------------------------TTCCBSSCEEEEEESCTTCCE
T ss_pred cCCcccccCchhhhhccccccccccccccccCCch------------------------hhcccchhhhhhhcccccccc
Confidence 55666666666666666777777776666644333 333444555555543 44553
Q ss_pred cCCccccCCC-cccEEeccCCcccccCCcccCCCCCCceeeccc-ceeeeccchhhcccCcccEEEcCCCccCCCCCCcc
Q 003199 276 SIPEGILSLP-HVSIIDLSYNSFSGPIANTVGNARNLSELFMQR-NQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGI 353 (840)
Q Consensus 276 ~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 353 (840)
..+..|..+. .++.|+|++|+|+.+.+..|. ..+|++|++++ |.++.+.+..|..+++|+.|||++|+|+...+..+
T Consensus 144 l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~-~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~ 222 (350)
T 4ay9_X 144 IERNSFVGLSFESVILWLNKNGIQEIHNSAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGL 222 (350)
T ss_dssp ECTTSSTTSBSSCEEEECCSSCCCEECTTSST-TEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSC
T ss_pred ccccchhhcchhhhhhccccccccCCChhhcc-ccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhh
Confidence 4444455443 466677777777655544443 34566777653 55654444556777777777777777775555556
Q ss_pred cCccccchhcccCCccCCCcchhcccccCCCEEECcCcc
Q 003199 354 GNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNL 392 (840)
Q Consensus 354 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~ 392 (840)
.++++|+.+++ +.++ .+| .+..+++|+.++++++.
T Consensus 223 ~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 223 ENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp TTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCHH
T ss_pred ccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCCc
Confidence 66666666655 3343 455 36778888888887654
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=9.6e-22 Score=208.38 Aligned_cols=172 Identities=27% Similarity=0.376 Sum_probs=76.2
Q ss_pred ccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCC
Q 003199 88 IGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKL 167 (840)
Q Consensus 88 ~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 167 (840)
+..+++|++|+|++|.+++. +. +..+++|++|+|++|+ +. .++ .+..+++|++|+|++|++++. + .+..+++|
T Consensus 59 ~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~L~~n~-l~-~~~-~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L 131 (308)
T 1h6u_A 59 VQYLNNLIGLELKDNQITDL-AP-LKNLTKITELELSGNP-LK-NVS-AIAGLQSIKTLDLTSTQITDV-T-PLAGLSNL 131 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEECCSCC-CS-CCG-GGTTCTTCCEEECTTSCCCCC-G-GGTTCTTC
T ss_pred hhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEEccCCc-CC-Cch-hhcCCCCCCEEECCCCCCCCc-h-hhcCCCCC
Confidence 34444444444444444422 22 4444444444444444 11 121 344445555555555555432 2 24455555
Q ss_pred cEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccc
Q 003199 168 RVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQN 247 (840)
Q Consensus 168 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n 247 (840)
++|++++|++++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|++|++++..+ +..+++|++|++++|
T Consensus 132 ~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N 205 (308)
T 1h6u_A 132 QVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNN 205 (308)
T ss_dssp CEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTS
T ss_pred CEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCC
Confidence 555555555543322 4455555555555555553222 4555555555555555543211 222222222222222
Q ss_pred cccccCCcccccccCCceEEeeCceee
Q 003199 248 MFSGVLPDSLARCKNLLRFRVSNNHLE 274 (840)
Q Consensus 248 ~~~~~~~~~~~~l~~L~~L~l~~N~l~ 274 (840)
.+.+.. .+..+++|+.|++++|.++
T Consensus 206 ~l~~~~--~l~~l~~L~~L~l~~N~i~ 230 (308)
T 1h6u_A 206 QISDVS--PLANTSNLFIVTLTNQTIT 230 (308)
T ss_dssp CCCBCG--GGTTCTTCCEEEEEEEEEE
T ss_pred ccCccc--cccCCCCCCEEEccCCeee
Confidence 222222 1445555555555555555
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=8.7e-22 Score=212.97 Aligned_cols=152 Identities=18% Similarity=0.211 Sum_probs=86.5
Q ss_pred cEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCC-cccCCCCCCCe-eec
Q 003199 71 RIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIP-EELGNLTELTD-LDM 148 (840)
Q Consensus 71 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p-~~l~~l~~L~~-L~L 148 (840)
++++.++++++ .+|..+. +++++|+|++|+|+...+..|.++++|++|+|++|++ .+.+| .+|.++++|.+ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i-~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV-LEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC--TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTT-CCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCcC--CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCC-CCccChhHhhcchhhhhhhcc
Confidence 34555566665 4454442 4566677777776644445566666666666666652 22232 34566666554 444
Q ss_pred cCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccC-CcCcccCCcCCCCCC-Ccceecccccccc
Q 003199 149 SVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYD-NSLTGEVPQDLGQWS-PLVVLDLSENKLS 226 (840)
Q Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~l~~l~-~L~~L~L~~N~l~ 226 (840)
+.|+++.+.|..|..+++|++|++++|+|....+..+....++..|++.+ |++..+.+..|..+. .++.|+|++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 55666655566666666666666666666655555555555566666644 455544444454443 3555566665555
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=2.1e-22 Score=209.79 Aligned_cols=165 Identities=15% Similarity=0.103 Sum_probs=124.0
Q ss_pred cCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCc--------hhhHHHHHHHHHHHHHHhccCCCCcceeee
Q 003199 528 MTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASD--------TDQLQLDKGLKTEVETLGNIRHKNIVKLYC 599 (840)
Q Consensus 528 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~--------~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 599 (840)
|...+.||+|+||.||+|...+|+.||||++........... .+.......+.+|++++++++ | +++.+
T Consensus 92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~ 168 (282)
T 1zar_A 92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPK 168 (282)
T ss_dssp SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCC
T ss_pred EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCe
Confidence 445689999999999999878899999999854332111000 011124567899999999999 4 66666
Q ss_pred EEecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeec
Q 003199 600 YFSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVAD 679 (840)
Q Consensus 600 ~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~D 679 (840)
++.. ...++||||+++|+|.+ +.. .....++.|++.||+|||+ .+|+||||||+|||++ ++.+||+|
T Consensus 169 ~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 169 VYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp EEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEECC
T ss_pred EEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 5543 56699999999999988 422 2355799999999999999 9999999999999999 99999999
Q ss_pred ccchhhhhccCCCCcceecccccccccCcccccc----------CCCCccccchh
Q 003199 680 FGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYS----------SKATTKCDVYS 724 (840)
Q Consensus 680 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~Dv~s 724 (840)
||+|+. +..|+|||++.. ..+...+|+|.
T Consensus 236 FG~a~~----------------~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~ 274 (282)
T 1zar_A 236 FPQSVE----------------VGEEGWREILERDVRNIITYFSRTYRTEKDINS 274 (282)
T ss_dssp CTTCEE----------------TTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred CCCCeE----------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence 999853 335788997643 34455556654
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=1.8e-20 Score=186.69 Aligned_cols=181 Identities=20% Similarity=0.191 Sum_probs=108.0
Q ss_pred cEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccc
Q 003199 168 RVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQN 247 (840)
Q Consensus 168 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n 247 (840)
+.++++++.++.++... .++|++|+|++|++++..+..|..+++|++|+|++|++++
T Consensus 10 ~~v~c~~~~l~~~p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-------------------- 66 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGI---PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQS-------------------- 66 (208)
T ss_dssp TEEECCSSCCSSCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCC--------------------
T ss_pred CEEEecCCCccCCCCCC---CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCc--------------------
Confidence 45566666665433222 3456666666666665555555666666666666666552
Q ss_pred cccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccch
Q 003199 248 MFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPS 327 (840)
Q Consensus 248 ~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~ 327 (840)
..+..|..+++|++|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|+|++|++++..+.
T Consensus 67 ----~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 67 ----LPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG 142 (208)
T ss_dssp ----CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ----cChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH
Confidence 2333455566666666666666644444556666666666666666665555566666666666666666655554
Q ss_pred hhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccC
Q 003199 328 EIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKS 382 (840)
Q Consensus 328 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 382 (840)
.+..+++|+.|+|++|.+.+ .+++|+.|+++.|+++|.+|..++.++.
T Consensus 143 ~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp TTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred HhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 55666666666666665543 3445666666666666666666665544
No 351
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=1.8e-20 Score=212.95 Aligned_cols=187 Identities=29% Similarity=0.449 Sum_probs=105.4
Q ss_pred CCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccc
Q 003199 142 ELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLS 221 (840)
Q Consensus 142 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~ 221 (840)
+|+.|+|++|.+++ +|..+. ++|++|+|++|+|+.+ | ..+++|++|+|++|+|++ +|. +.. +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~i-p---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALISL-P---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSCC-C---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCccc-c---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 56666666666664 444332 5566666666666532 2 234555555555555553 333 332 45555555
Q ss_pred cccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccC
Q 003199 222 ENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPI 301 (840)
Q Consensus 222 ~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 301 (840)
+|+|++ +|. .+++|+.|++++|+|++ +|.
T Consensus 129 ~N~l~~-------------------------lp~---~l~~L~~L~Ls~N~l~~-lp~---------------------- 157 (571)
T 3cvr_A 129 NNQLTM-------------------------LPE---LPALLEYINADNNQLTM-LPE---------------------- 157 (571)
T ss_dssp SSCCSC-------------------------CCC---CCTTCCEEECCSSCCSC-CCC----------------------
T ss_pred CCcCCC-------------------------CCC---cCccccEEeCCCCccCc-CCC----------------------
Confidence 554441 111 23444455555554442 332
Q ss_pred CcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCcccc-------chhcccCCccCCCcc
Q 003199 302 ANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKL-------NLLMLQSNKLNSSIP 374 (840)
Q Consensus 302 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~~ 374 (840)
.+++|+.|+|++|+|++ +|. +. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|
T Consensus 158 -----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp 223 (571)
T 3cvr_A 158 -----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIP 223 (571)
T ss_dssp -----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCC
T ss_pred -----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecC
Confidence 24455555555555553 333 33 56666666666666 4444 443 55 88888888887 567
Q ss_pred hhcccccCCCEEECcCccccccCCchhhcc
Q 003199 375 NSLSSLKSLNVLDLSNNLLTGYIPESLCEL 404 (840)
Q Consensus 375 ~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~ 404 (840)
..+..+++|+.|+|++|+|++.+|..+..+
T Consensus 224 ~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 224 ENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp GGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred HHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 777778888888888888888888877765
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=5.2e-20 Score=183.29 Aligned_cols=162 Identities=26% Similarity=0.245 Sum_probs=99.3
Q ss_pred CCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEE
Q 003199 92 TSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQ 171 (840)
Q Consensus 92 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (840)
++|++|+|++|++++..+..|..+++|++|+|++|+ +.+..+..|..+++|++|+|++|++++..+..|..+++|++|+
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 106 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNK-LQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELA 106 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCc-cCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEE
Confidence 356666666666664444455666666666666665 2333333456666666666666666655555566666677777
Q ss_pred eeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccc
Q 003199 172 LYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSG 251 (840)
Q Consensus 172 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~ 251 (840)
|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|+|++|.+.+ .+++|++|.++.|.+.|
T Consensus 107 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g 179 (208)
T 2o6s_A 107 LNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSG 179 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTT
T ss_pred cCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCc
Confidence 77776666666666666777777777777765555556667777777777776542 33456666666666666
Q ss_pred cCCccccccc
Q 003199 252 VLPDSLARCK 261 (840)
Q Consensus 252 ~~~~~~~~l~ 261 (840)
.+|..++.++
T Consensus 180 ~ip~~~~~l~ 189 (208)
T 2o6s_A 180 VVRNSAGSVA 189 (208)
T ss_dssp TBBCTTSSBC
T ss_pred eeeccCcccc
Confidence 6666555443
No 353
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.81 E-value=1.1e-19 Score=206.51 Aligned_cols=178 Identities=25% Similarity=0.348 Sum_probs=89.8
Q ss_pred CCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEE
Q 003199 18 NLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDL 97 (840)
Q Consensus 18 ~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 97 (840)
+|+.|+|++|+|++ +|..+. ++|+.|+|++| .+..+| ..+++|++|+|++|.+++ +|. +.. +|++|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N---~l~~ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L 125 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQN---ALISLP----ELPASLEYLDACDNRLST-LPE-LPA--SLKHL 125 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSS---CCSCCC----CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEE
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCC---CCcccc----cccCCCCEEEccCCCCCC-cch-hhc--CCCEE
Confidence 56666666666663 454442 56666666666 344444 234556666666666654 444 443 56666
Q ss_pred EccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeecccc
Q 003199 98 ELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSL 177 (840)
Q Consensus 98 ~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 177 (840)
+|++|+|++ +|. .+++|+.|+|++|+ + ..+|. .+++|++|+|++|+|++ +|. |. ++|+.|+|++|+|
T Consensus 126 ~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~-l-~~lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L 192 (571)
T 3cvr_A 126 DVDNNQLTM-LPE---LPALLEYINADNNQ-L-TMLPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLL 192 (571)
T ss_dssp ECCSSCCSC-CCC---CCTTCCEEECCSSC-C-SCCCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCC
T ss_pred ECCCCcCCC-CCC---cCccccEEeCCCCc-c-CcCCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCC
Confidence 666666653 333 45555555555554 2 22443 34555555555555553 333 33 5555555555555
Q ss_pred ccccchhhhcCCCC-------CEEEccCCcCcccCCcCCCCCCCcceeccccccccc
Q 003199 178 SGEISSVIANSTTL-------TMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSG 227 (840)
Q Consensus 178 ~~~~~~~~~~l~~L-------~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 227 (840)
+.+ |. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++
T Consensus 193 ~~l-p~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 193 ESL-PA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp SSC-CC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCH
T ss_pred Cch-hh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCC
Confidence 522 22 222 33 55555555554 234444444555555555555443
No 354
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=5.9e-20 Score=211.18 Aligned_cols=193 Identities=24% Similarity=0.282 Sum_probs=132.4
Q ss_pred CCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCc
Q 003199 16 MQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLT 95 (840)
Q Consensus 16 l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 95 (840)
+.++..+.|+.+.+++..+ +..|++|+.|+|++| .+..++ .+..+++|+.|+|++|.+.+..| +..+++|+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n---~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~ 90 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNS---DIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLG 90 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTC---CCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCC
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCC---CCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCC
Confidence 3445566677777664433 556777777888777 444444 36777777777777777775443 77777777
Q ss_pred EEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeecc
Q 003199 96 DLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNN 175 (840)
Q Consensus 96 ~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 175 (840)
.|+|++|.|++ +| .+..+++|+.|+|++|+ +. .+ ..+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|
T Consensus 91 ~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~-l~-~l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N 163 (605)
T 1m9s_A 91 WLFLDENKIKD-LS-SLKDLKKLKSLSLEHNG-IS-DI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDN 163 (605)
T ss_dssp EEECCSSCCCC-CT-TSTTCTTCCEEECTTSC-CC-CC-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSS
T ss_pred EEECcCCCCCC-Ch-hhccCCCCCEEEecCCC-CC-CC-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCC
Confidence 77777777773 33 57777777777777776 22 23 3466777777777777777754 56777777777777777
Q ss_pred ccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceecccccccccc
Q 003199 176 SLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGP 228 (840)
Q Consensus 176 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~ 228 (840)
.|.+..+ +..+++|++|+|++|+|++. ..+..+++|+.|+|++|++.+.
T Consensus 164 ~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 164 QISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp CCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECC
T ss_pred cCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCC
Confidence 7776555 77777777777777777753 3567777777777777777643
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.2e-19 Score=190.31 Aligned_cols=190 Identities=24% Similarity=0.282 Sum_probs=131.5
Q ss_pred CCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEE
Q 003199 18 NLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDL 97 (840)
Q Consensus 18 ~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 97 (840)
++..+.+..+.+++..+ +..+++|+.|++++| .+..++ .+..+++|++|+|++|.+++..+ +..+++|++|
T Consensus 25 ~~~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~---~i~~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L 95 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNS---DIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWL 95 (291)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHHTCCEEECTTS---CCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HHHHHHhcCCCcccccc--hhhcCcccEEEccCC---CcccCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEE
Confidence 34445566666653322 456777777777777 444443 36677777777777777775433 7777778888
Q ss_pred EccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeecccc
Q 003199 98 ELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSL 177 (840)
Q Consensus 98 ~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 177 (840)
+|++|++++ +| .+..+++|++|+|++|+ +. .+ ..+..+++|++|+|++|++++. ..+..+++|+.|++++|++
T Consensus 96 ~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~-i~-~~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l 168 (291)
T 1h6t_A 96 FLDENKVKD-LS-SLKDLKKLKSLSLEHNG-IS-DI-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQI 168 (291)
T ss_dssp ECCSSCCCC-GG-GGTTCTTCCEEECTTSC-CC-CC-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred ECCCCcCCC-Ch-hhccCCCCCEEECCCCc-CC-CC-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcc
Confidence 888887774 33 47777778888887776 22 23 3567777788888888887754 5677778888888888887
Q ss_pred ccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccc
Q 003199 178 SGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSG 227 (840)
Q Consensus 178 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 227 (840)
++..+ +..+++|++|+|++|++++. + .+..+++|+.|++++|+++.
T Consensus 169 ~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 169 SDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred ccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 76554 77778888888888887743 3 47777788888888887764
No 356
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=1.2e-19 Score=181.90 Aligned_cols=136 Identities=24% Similarity=0.295 Sum_probs=108.3
Q ss_pred cCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEc
Q 003199 261 KNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDL 340 (840)
Q Consensus 261 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 340 (840)
++|+.|++++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+|+++.+..|..+++|+.|+|
T Consensus 32 ~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 32 ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 56778888888887666667777888888888888888777778888888888888888888665556677888888888
Q ss_pred CCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCcccccc
Q 003199 341 SDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGY 396 (840)
Q Consensus 341 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 396 (840)
++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+.
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 88888877777888888888888888888877777788888888888888888754
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=2.4e-19 Score=206.07 Aligned_cols=184 Identities=23% Similarity=0.304 Sum_probs=158.0
Q ss_pred CCCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCC
Q 003199 12 DFSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNV 91 (840)
Q Consensus 12 ~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 91 (840)
.+..|++|+.|+|++|.|+ .+| .+..+++|+.|+|++| .+..+++ +..+++|+.|+|++|.+.+. ..+..+
T Consensus 38 ~~~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N---~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l 108 (605)
T 1m9s_A 38 TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGN---KLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDL 108 (605)
T ss_dssp CHHHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTS---CCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTC
T ss_pred chhcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCC---CCCCChh--hccCCCCCEEECcCCCCCCC--hhhccC
Confidence 3567899999999999998 555 5899999999999999 5666665 89999999999999999853 479999
Q ss_pred CCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEE
Q 003199 92 TSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQ 171 (840)
Q Consensus 92 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (840)
++|++|+|++|.|++ + ..+..+++|+.|+|++|+ +. .+ ..+..+++|+.|+|++|.|++..| +..+++|+.|+
T Consensus 109 ~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~-l~-~l-~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 109 KKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNK-IT-DI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp TTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSC-CC-CC-GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCc-cC-Cc-hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 999999999999995 3 469999999999999998 33 33 678999999999999999997665 99999999999
Q ss_pred eeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCC
Q 003199 172 LYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWS 213 (840)
Q Consensus 172 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~ 213 (840)
|++|+|++. ..+..+++|+.|+|++|++.......+..+.
T Consensus 182 Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~~l~ 221 (605)
T 1m9s_A 182 LSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQSNLV 221 (605)
T ss_dssp CCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCSSCE
T ss_pred CcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccccEE
Confidence 999999975 4689999999999999999865444444433
No 358
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=2.2e-19 Score=180.10 Aligned_cols=137 Identities=20% Similarity=0.234 Sum_probs=106.2
Q ss_pred CCceEEeeCceeeccCC-ccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEc
Q 003199 262 NLLRFRVSNNHLEGSIP-EGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDL 340 (840)
Q Consensus 262 ~L~~L~l~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 340 (840)
.+++|+|++|+|++..+ ..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|
T Consensus 33 ~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 112 (220)
T 2v70_A 33 YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112 (220)
T ss_dssp TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEEC
T ss_pred CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEEC
Confidence 45677788887776544 34667778888888888887777777788888888888888887777777777888888888
Q ss_pred CCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCC
Q 003199 341 SDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 341 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 398 (840)
++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+
T Consensus 113 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 8888887777778888888888888888887777888888888888888888876554
No 359
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.4e-19 Score=189.81 Aligned_cols=175 Identities=24% Similarity=0.312 Sum_probs=152.6
Q ss_pred CCCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCC
Q 003199 12 DFSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNV 91 (840)
Q Consensus 12 ~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 91 (840)
.+..+++|++|++++|.++ .++ .+..+++|++|+|++| .+..+++ +..+++|+.|++++|.+++. ..+..+
T Consensus 41 ~~~~l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n---~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l 111 (291)
T 1h6t_A 41 TQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGN---KLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDL 111 (291)
T ss_dssp CHHHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSS---CCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTC
T ss_pred chhhcCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCC---ccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccC
Confidence 3567889999999999999 445 4899999999999999 5666665 89999999999999999863 349999
Q ss_pred CCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEE
Q 003199 92 TSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQ 171 (840)
Q Consensus 92 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 171 (840)
++|++|+|++|++++. ..+..+++|+.|++++|+ +. .+ ..+..+++|++|+|++|.+++..+ +..+++|+.|+
T Consensus 112 ~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~-l~-~~-~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 184 (291)
T 1h6t_A 112 KKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNK-IT-DI-TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184 (291)
T ss_dssp TTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSC-CC-CC-GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCc-CC-cc-hhhccCCCCCEEEccCCccccchh--hcCCCccCEEE
Confidence 9999999999999953 579999999999999998 33 33 578999999999999999997654 99999999999
Q ss_pred eeccccccccchhhhcCCCCCEEEccCCcCccc
Q 003199 172 LYNNSLSGEISSVIANSTTLTMLSLYDNSLTGE 204 (840)
Q Consensus 172 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 204 (840)
|++|.+++.. .+..+++|+.|++++|+++..
T Consensus 185 L~~N~i~~l~--~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 185 LSKNHISDLR--ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp CCSSCCCBCG--GGTTCTTCSEEEEEEEEEECC
T ss_pred CCCCcCCCCh--hhccCCCCCEEECcCCcccCC
Confidence 9999999653 489999999999999999853
No 360
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=3.2e-19 Score=193.56 Aligned_cols=176 Identities=24% Similarity=0.222 Sum_probs=93.8
Q ss_pred CEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCccccc-ccccccEEEecCccccccCCccccCCCCCcEEE
Q 003199 20 RRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIF-RLTKLRIMVLATCALHGQIPASIGNVTSLTDLE 98 (840)
Q Consensus 20 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 98 (840)
+++++++++++ .+|..+. ..++.|+|++| .+..++...|. .+++|+.|+|++|.|++..+..|.++++|++|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N---~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 94 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHN---NLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLD 94 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSS---CCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCC---CCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEE
Confidence 56777777777 5565443 34666777766 45555555555 555666666666665555555555555555555
Q ss_pred ccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccc
Q 003199 99 LTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLS 178 (840)
Q Consensus 99 L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 178 (840)
|++|+|+...+..|..+++|+.|+|++| +|+.+.+..|..+++|+.|+|++|+|+
T Consensus 95 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N-------------------------~i~~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 95 LSSNHLHTLDEFLFSDLQALEVLLLYNN-------------------------HIVVVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSS-------------------------CCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCcCCHHHhCCCcCCCEEECCCC-------------------------cccEECHHHhCCcccCCEEECCCCcCC
Confidence 5555555444444555555555555555 444444444444444444444444444
Q ss_pred cccchhh---hcCCCCCEEEccCCcCcccCCcCCCCCCC--cceecccccccc
Q 003199 179 GEISSVI---ANSTTLTMLSLYDNSLTGEVPQDLGQWSP--LVVLDLSENKLS 226 (840)
Q Consensus 179 ~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~l~~l~~--L~~L~L~~N~l~ 226 (840)
.+.+..| ..+++|++|+|++|+|+.+.+..+..++. |+.|+|++|++.
T Consensus 150 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 150 RFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp SCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred eeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 4333333 33555555555555555333334444444 355666666654
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=7.9e-19 Score=177.27 Aligned_cols=137 Identities=22% Similarity=0.210 Sum_probs=109.5
Q ss_pred cCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEc
Q 003199 261 KNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDL 340 (840)
Q Consensus 261 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 340 (840)
++|++|+|++|.+++..|..|..+++|+.|+|++|+++...+..|..+++|+.|+|++|+|++..+..+..+++|+.|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 67888888888888777777788888888888888887777777788888888888888888666666777888888888
Q ss_pred CCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCC
Q 003199 341 SDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 341 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 398 (840)
++|+|+ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 888887 677777888888888888888887666778888888888888888886654
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=1.3e-18 Score=174.32 Aligned_cols=152 Identities=19% Similarity=0.289 Sum_probs=89.3
Q ss_pred CEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEc
Q 003199 20 RRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLEL 99 (840)
Q Consensus 20 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 99 (840)
+.++++++.++ .+|..+. ++|++|+|++| .+..+++ ..|..+++|++|+|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n---~i~~i~~------------------------~~~~~l~~L~~L~L 63 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQN---TIKVIPP------------------------GAFSPYKKLRRIDL 63 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSS---CCCEECT------------------------TSSTTCTTCCEEEC
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCC---cCCCcCH------------------------hHhhCCCCCCEEEC
Confidence 45666666666 4554433 45555555555 3444444 44555555555555
Q ss_pred cCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeecccccc
Q 003199 100 TGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSG 179 (840)
Q Consensus 100 ~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 179 (840)
++|+|++..|..|..+++|++|+|++|+ +....+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++
T Consensus 64 s~N~i~~~~~~~~~~l~~L~~L~Ls~N~-l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 142 (220)
T 2v9t_B 64 SNNQISELAPDAFQGLRSLNSLVLYGNK-ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT 142 (220)
T ss_dssp CSSCCCEECTTTTTTCSSCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCcCCCcCHHHhhCCcCCCEEECCCCc-CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCE
Confidence 5555554445555555555555555554 222222335566666666666666666666666667777777777777766
Q ss_pred ccchhhhcCCCCCEEEccCCcCc
Q 003199 180 EISSVIANSTTLTMLSLYDNSLT 202 (840)
Q Consensus 180 ~~~~~~~~l~~L~~L~L~~N~l~ 202 (840)
+.+..|..+++|++|+|++|++.
T Consensus 143 ~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 143 IAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCTTTTTTCTTCCEEECCSSCEE
T ss_pred ECHHHHhCCCCCCEEEeCCCCcC
Confidence 66666777777777777777765
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=6.9e-19 Score=190.98 Aligned_cols=177 Identities=24% Similarity=0.205 Sum_probs=146.6
Q ss_pred cEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhh-cCCCCCeeecccCccccccCCcccCCCCCCCeeecc
Q 003199 71 RIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIG-LLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMS 149 (840)
Q Consensus 71 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~-~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~ 149 (840)
++++++++.++ .+|..+. ..++.|+|++|+|++..+..|. .+++|+.|+|++|+ +.+..+..|.++++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~-i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNH-LNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSC-CCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCc-CCccChhhccCCCCCCEEECC
Confidence 45677777766 3555443 3578888888888877777777 88888888888887 455556678899999999999
Q ss_pred CCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCC---CCCCCcceecccccccc
Q 003199 150 VNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDL---GQWSPLVVLDLSENKLS 226 (840)
Q Consensus 150 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l---~~l~~L~~L~L~~N~l~ 226 (840)
+|+|+.+.+..|..+++|++|+|++|+|+.+.+..|.++++|++|+|++|+|+.+.+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 999998878889999999999999999999989999999999999999999997555555 56999999999999999
Q ss_pred ccCCccccCCCC--chhhhcccccccc
Q 003199 227 GPLPAKVCSRGK--LQYFLVLQNMFSG 251 (840)
Q Consensus 227 ~~~~~~~~~l~~--L~~L~l~~n~~~~ 251 (840)
+..+..+..++. ++.|++.+|.+..
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred ccCHHHhhhccHhhcceEEecCCCccC
Confidence 877778888887 4889999998864
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=2.2e-18 Score=172.79 Aligned_cols=152 Identities=18% Similarity=0.228 Sum_probs=87.2
Q ss_pred CEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCC-cccccccccccEEEecCccccccCCccccCCCCCcEEE
Q 003199 20 RRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLP-ESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLE 98 (840)
Q Consensus 20 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~-~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 98 (840)
+.+++++|.++ .+|..+. ..+++|+|++| .+..++ ...|..+++|+.|+|++|.+++..+..|.++++|++|+
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N---~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 87 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNN---EFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEIL 87 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSS---CCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCC---cCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEE
Confidence 57888888887 5666553 34577777777 455542 34456666666666666666655555666666666666
Q ss_pred ccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccc
Q 003199 99 LTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLS 178 (840)
Q Consensus 99 L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 178 (840)
|++|+|++..+..|..+++|++|+|++|+ +.+..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+.
T Consensus 88 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 88 LTSNRLENVQHKMFKGLESLKTLMLRSNR-ITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCSSCCCCCCGGGGTTCSSCCEEECTTSC-CCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CCCCccCccCHhHhcCCcCCCEEECCCCc-CCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 66666665545555555555555555554 33333444555555555555555555444444444555555555444443
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=3.4e-21 Score=220.27 Aligned_cols=107 Identities=24% Similarity=0.328 Sum_probs=61.0
Q ss_pred ccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccC
Q 003199 287 VSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQS 366 (840)
Q Consensus 287 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 366 (840)
|+.|+|++|+|+++ |. |+.+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++ +| .++.+++|+.|+|++
T Consensus 443 L~~L~Ls~n~l~~l-p~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTVL-CH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSSC-CC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCCC-cC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 45555555555542 32 555555555555555555 445555556666666666666654 34 555566666666666
Q ss_pred CccCCCc-chhcccccCCCEEECcCccccccCC
Q 003199 367 NKLNSSI-PNSLSSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 367 N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~p 398 (840)
|+|++.. |..|..+++|+.|+|++|+|++.+|
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 6665554 5566666666666666666664433
No 366
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=2.6e-19 Score=184.84 Aligned_cols=151 Identities=21% Similarity=0.292 Sum_probs=88.2
Q ss_pred ccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCC
Q 003199 64 IFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTEL 143 (840)
Q Consensus 64 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L 143 (840)
+..+++|+.|++++|.++. ++ .+..+++|++|+|++|+|++..+ +..+++|+.|+|++|+ ...+|.. .. ++|
T Consensus 37 ~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~--l~~l~~~-~~-~~L 108 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNR--LKNLNGI-PS-ACL 108 (263)
T ss_dssp HHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSC--CSCCTTC-CC-SSC
T ss_pred hhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCc--cCCcCcc-cc-Ccc
Confidence 3344444444444444432 22 34445555555555555553222 5555555555555554 2223322 22 667
Q ss_pred CeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccc
Q 003199 144 TDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSEN 223 (840)
Q Consensus 144 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N 223 (840)
++|+|++|++++. ..+..+++|+.|+|++|++++.. .+..+++|++|+|++|++++. ..+..+++|+.|++++|
T Consensus 109 ~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~~--~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N 182 (263)
T 1xeu_A 109 SRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSIV--MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQ 182 (263)
T ss_dssp CEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBCG--GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEE
T ss_pred cEEEccCCccCCC--hhhcCcccccEEECCCCcCCCCh--HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCC
Confidence 7777777777643 24667777777777777776542 567777777777777777754 56777777777777777
Q ss_pred ccccc
Q 003199 224 KLSGP 228 (840)
Q Consensus 224 ~l~~~ 228 (840)
++++.
T Consensus 183 ~~~~~ 187 (263)
T 1xeu_A 183 KCVNE 187 (263)
T ss_dssp EEECC
T ss_pred cccCC
Confidence 77644
No 367
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=8.7e-19 Score=171.67 Aligned_cols=174 Identities=19% Similarity=0.248 Sum_probs=134.0
Q ss_pred ceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCc-ccCCCCCCceeecccceeeeccchhhcccCcccEEEcCC
Q 003199 264 LRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIAN-TVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSD 342 (840)
Q Consensus 264 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 342 (840)
+.+++++|+++ .+|..+.. +|+.|++++|++++..+. .|+.+++|++|+|++|+|++..|..|..+++|+.|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 67888888887 67776544 889999999999877764 588899999999999999988888999999999999999
Q ss_pred CccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCCchhhccCCCeEEccCCCCcCcCCc
Q 003199 343 NLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIPESLCELLPNSINFSNNRLSGPIPL 422 (840)
Q Consensus 343 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~~~l~l~~N~l~~~~p~ 422 (840)
|+|++..+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+.......+....+.++...+..|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P~ 167 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPS 167 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSST
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCCh
Confidence 99998888889999999999999999998889999999999999999999998776432211112223445555555565
Q ss_pred ccccCCCcccccCCCCCcc
Q 003199 423 SLIKEGLVESFSGNPGLCV 441 (840)
Q Consensus 423 ~~~~~~~~~~~~~n~~~c~ 441 (840)
.+... ....+..+...|.
T Consensus 168 ~l~~~-~l~~l~~~~~~C~ 185 (192)
T 1w8a_A 168 KVRDV-QIKDLPHSEFKCS 185 (192)
T ss_dssp TTTTS-BGGGSCTTTCCCC
T ss_pred HHcCC-ChhhCcHhhcCcC
Confidence 44332 3334555555564
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=3e-19 Score=184.35 Aligned_cols=171 Identities=20% Similarity=0.236 Sum_probs=144.7
Q ss_pred CCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCC
Q 003199 15 PMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSL 94 (840)
Q Consensus 15 ~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 94 (840)
.+.++..+++++|.++ .++ .+..+++|+.|++++| .+..++ .+..+++|+.|+|++|.+++..+ +..+++|
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n---~i~~l~--~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L 87 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNS---NIQSLA--GMQFFTNLKELHLSHNQISDLSP--LKDLTKL 87 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTS---CCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCSSC
T ss_pred HHHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCC---Ccccch--HHhhCCCCCEEECCCCccCCChh--hccCCCC
Confidence 5677888999999998 444 6889999999999999 566665 58899999999999999986544 9999999
Q ss_pred cEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeec
Q 003199 95 TDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYN 174 (840)
Q Consensus 95 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 174 (840)
++|+|++|++++ +|.. .. ++|+.|+|++|+ +. .++ .+..+++|++|+|++|++++. + .+..+++|+.|+|++
T Consensus 88 ~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~-l~-~~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~ 159 (263)
T 1xeu_A 88 EELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNE-LR-DTD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHG 159 (263)
T ss_dssp CEEECCSSCCSC-CTTC-CC-SSCCEEECCSSC-CS-BSG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTT
T ss_pred CEEECCCCccCC-cCcc-cc-CcccEEEccCCc-cC-CCh-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCC
Confidence 999999999995 4433 33 999999999998 33 343 688999999999999999964 3 688999999999999
Q ss_pred cccccccchhhhcCCCCCEEEccCCcCccc
Q 003199 175 NSLSGEISSVIANSTTLTMLSLYDNSLTGE 204 (840)
Q Consensus 175 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 204 (840)
|++++. ..+..+++|+.|++++|++...
T Consensus 160 N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 160 NEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp SCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 999876 6789999999999999999854
No 369
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.76 E-value=2.3e-18 Score=169.54 Aligned_cols=152 Identities=22% Similarity=0.297 Sum_probs=70.4
Q ss_pred CCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCC
Q 003199 15 PMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSL 94 (840)
Q Consensus 15 ~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 94 (840)
.+++|++|++++|.|+ .+| .+..+++|++|++++| .+..++ .+..+++|++|++++|.+++..+..++.+++|
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n---~~~~~~--~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNI---HATNYN--PISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESC---CCSCCG--GGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCC---CCCcch--hhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3445555555555555 334 3555555555555555 232222 34445555555555555554444455555555
Q ss_pred cEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeec
Q 003199 95 TDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYN 174 (840)
Q Consensus 95 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 174 (840)
++|+|++|++++..|..+..+++|++|+|++|+. .+.+| .+..+++|++|++++|.+++ ++ .+..+++|++|++++
T Consensus 115 ~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~-i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~ 190 (197)
T 4ezg_A 115 TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGA-ITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFS 190 (197)
T ss_dssp CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTB-CCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECB
T ss_pred CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCC-ccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeC
Confidence 5555555555544444455555555555554431 11222 34444444444444444442 11 333444444444444
Q ss_pred ccc
Q 003199 175 NSL 177 (840)
Q Consensus 175 N~l 177 (840)
|+|
T Consensus 191 N~i 193 (197)
T 4ezg_A 191 QTI 193 (197)
T ss_dssp C--
T ss_pred ccc
Confidence 443
No 370
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=2.8e-19 Score=191.52 Aligned_cols=221 Identities=9% Similarity=0.045 Sum_probs=141.4
Q ss_pred CCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceecccccc----ccccCCccccCCCCc
Q 003199 164 LPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENK----LSGPLPAKVCSRGKL 239 (840)
Q Consensus 164 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~----l~~~~~~~~~~l~~L 239 (840)
+++|+.|+|.+ .++.+...+|.++++|++|++++|.+..+.+.+|.++.++..+.+..+. ........|.++..|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66666666666 5555556666666666666666666655555666665555555554422 122223334333333
Q ss_pred h-hhhccccc-ccccCCcccccccCCceEEeeCceeeccCCcccc-CCCcccEEeccCCcccccCCcccCCCCCCceeec
Q 003199 240 Q-YFLVLQNM-FSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGIL-SLPHVSIIDLSYNSFSGPIANTVGNARNLSELFM 316 (840)
Q Consensus 240 ~-~L~l~~n~-~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 316 (840)
+ .+.+.... +.......-....++..+.+.++-.. .....+. .+++|+.|+|++|+++.+...+|.++++|++|+|
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l 257 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKL 257 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEEC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEEC
Confidence 3 12111110 00000000112345566666554222 1111111 2678999999998898888888999999999999
Q ss_pred ccceeeeccchhhcccCccc-EEEcCCCccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEEC
Q 003199 317 QRNQISGFIPSEIYRAISLV-KIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDL 388 (840)
Q Consensus 317 ~~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l 388 (840)
.+| ++.+.+.+|.++.+|+ .+++.+ .++...+.+|.++++|+.|++++|.++.+.+.+|.++++|+.|+.
T Consensus 258 ~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 258 PHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred Ccc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 888 7777788888899998 999988 777667788999999999999999998777889999999998864
No 371
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=6.6e-21 Score=217.88 Aligned_cols=190 Identities=24% Similarity=0.232 Sum_probs=95.1
Q ss_pred CCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCC----------ccCCCCcccccccccccEEE-ecCcccc
Q 003199 13 FSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGF----------KLWKLPESSIFRLTKLRIMV-LATCALH 81 (840)
Q Consensus 13 ~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~----------~l~~l~~~~~~~l~~L~~L~-L~~n~l~ 81 (840)
+..+++|+.|+|++|.++ .+|..++++++|++|++++|... .....++..+..+++|+.|+ ++.|.+.
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~ 423 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD 423 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred cccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc
Confidence 467788888888888887 78888888888888888666100 01112222333333333333 2222211
Q ss_pred ccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccc
Q 003199 82 GQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESI 161 (840)
Q Consensus 82 ~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~ 161 (840)
+|+.+.+++|.|+.. |. ..|+.|+|++|+ ...+|. ++.+++|+.|+|++|.|+ .+|..|
T Consensus 424 -----------~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~--l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~ 482 (567)
T 1dce_A 424 -----------DLRSKFLLENSVLKM-EY-----ADVRVLHLAHKD--LTVLCH-LEQLLLVTHLDLSHNRLR-ALPPAL 482 (567)
T ss_dssp -----------HHHHHHHHHHHHHHH-HH-----TTCSEEECTTSC--CSSCCC-GGGGTTCCEEECCSSCCC-CCCGGG
T ss_pred -----------hhhhhhhhccccccc-Cc-----cCceEEEecCCC--CCCCcC-ccccccCcEeecCccccc-ccchhh
Confidence 122222223333211 10 134555555554 122343 455555555555555555 344455
Q ss_pred cCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccC-CcCCCCCCCcceecccccccc
Q 003199 162 LRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEV-PQDLGQWSPLVVLDLSENKLS 226 (840)
Q Consensus 162 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~l~~l~~L~~L~L~~N~l~ 226 (840)
..+++|+.|+|++|+|+++ | .+.++++|++|+|++|+|++.. |..+..+++|+.|+|++|+++
T Consensus 483 ~~l~~L~~L~Ls~N~l~~l-p-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 483 AALRCLEVLQASDNALENV-D-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp GGCTTCCEEECCSSCCCCC-G-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred hcCCCCCEEECCCCCCCCC-c-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 5555555555555555532 2 4455555555555555555443 445555555555555555554
No 372
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=9e-19 Score=180.15 Aligned_cols=146 Identities=19% Similarity=0.231 Sum_probs=108.1
Q ss_pred cCccCeeeccCCcEEEEEEe-CCCcE--EEEEEecccccccccCc--------------hhhHHHHHHHHHHHHHHhccC
Q 003199 528 MTEKNKVGQGGSGTVYKIDL-NSGEV--VAVKKLWSQRTKVSASD--------------TDQLQLDKGLKTEVETLGNIR 590 (840)
Q Consensus 528 ~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~~~~~--------------~~~~~~~~~~~~E~~~l~~l~ 590 (840)
|...+.||+|+||.||+|.. .+|+. ||||+++.......... .........+.+|+.++.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45667899999999999977 67989 99998754321110000 001223356889999999998
Q ss_pred CCCc--ceeeeEEecCccceEEEeecCC-C----ChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHh-hcCCCCeEecCC
Q 003199 591 HKNI--VKLYCYFSSLYCNLLVYEYMPN-G----NLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLH-HGLLSPIIHRDI 662 (840)
Q Consensus 591 h~ni--v~l~~~~~~~~~~~lV~e~~~~-g----sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH-~~~~~~ivH~Dl 662 (840)
|+++ ..++++ ...++||||+.+ | +|.+.... .++..+..++.|++.|+.||| + .+||||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~~---~givHrDl 197 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQE---AELVHADL 197 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHHT---SCEECSSC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHHH---CCEEeCCC
Confidence 8864 334432 366899999942 4 66665432 235678899999999999999 8 89999999
Q ss_pred CCCCEEEcCCCCCeeecccchhhh
Q 003199 663 KSTNILLDVNYQPKVADFGIAKVL 686 (840)
Q Consensus 663 k~~Nill~~~~~~kl~Dfg~a~~~ 686 (840)
||+|||++. .++|+|||+|...
T Consensus 198 kp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 198 SEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp STTSEEESS--SEEECCCTTCEET
T ss_pred CHHHEEEcC--cEEEEECcccccC
Confidence 999999998 9999999999654
No 373
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=9.5e-18 Score=169.30 Aligned_cols=153 Identities=24% Similarity=0.286 Sum_probs=84.1
Q ss_pred CCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEE
Q 003199 19 LRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLE 98 (840)
Q Consensus 19 L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 98 (840)
-+.++++++.++ .+|..+. ++|++|+|++| .+.+..|..|.++++|++|+
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n---------------------------~i~~~~~~~~~~l~~L~~L~ 70 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDN---------------------------QITKLEPGVFDSLINLKELY 70 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSS---------------------------CCCCCCTTTTTTCTTCCEEE
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCC---------------------------ccCccCHHHhhCccCCcEEE
Confidence 455666666666 5554332 55555555555 44444444455555555555
Q ss_pred ccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccc
Q 003199 99 LTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLS 178 (840)
Q Consensus 99 L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 178 (840)
|++|+|+...+..|..+++|+.|+|++|+ +.+..+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|+
T Consensus 71 L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~-l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~ 148 (229)
T 3e6j_A 71 LGSNQLGALPVGVFDSLTQLTVLDLGTNQ-LTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLK 148 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSC-CCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCC
T ss_pred CCCCCCCCcChhhcccCCCcCEEECCCCc-CCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCC
Confidence 55555543333444555555555555554 22222334455556666666666665 44555566666666666666666
Q ss_pred cccchhhhcCCCCCEEEccCCcCcc
Q 003199 179 GEISSVIANSTTLTMLSLYDNSLTG 203 (840)
Q Consensus 179 ~~~~~~~~~l~~L~~L~L~~N~l~~ 203 (840)
+..+..|..+++|++|+|++|.+..
T Consensus 149 ~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 149 SIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred ccCHHHHhCCCCCCEEEeeCCCccC
Confidence 5555556666666666666666653
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=4.4e-18 Score=167.54 Aligned_cols=134 Identities=17% Similarity=0.187 Sum_probs=103.3
Q ss_pred ccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcc
Q 003199 256 SLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISL 335 (840)
Q Consensus 256 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 335 (840)
.+..+++|++|++++|.++ .+..+..+++|++|++++|++++..+..++.+++|++|+|++|++++..|..+..+++|
T Consensus 61 ~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L 138 (197)
T 4ezg_A 61 GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKV 138 (197)
T ss_dssp TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSC
T ss_pred HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCC
Confidence 4667778888888888665 33467778888888888888887777778888888888888888887778888888888
Q ss_pred cEEEcCCCc-cCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccc
Q 003199 336 VKIDLSDNL-LSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTG 395 (840)
Q Consensus 336 ~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 395 (840)
+.|+|++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|+.|++++|++.+
T Consensus 139 ~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 139 NSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 888888887 65 444 57788888888888888875 33 67888888888888888763
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.72 E-value=3.9e-18 Score=182.63 Aligned_cols=265 Identities=13% Similarity=0.071 Sum_probs=188.2
Q ss_pred CCCCCEEecCCCcCc--ccCCccccCCCCCCEEeCCCCCCCccCCCCcccccc--------cccccEEEecCccccccCC
Q 003199 16 MQNLRRLDLSNNLFT--GQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFR--------LTKLRIMVLATCALHGQIP 85 (840)
Q Consensus 16 l~~L~~L~Ls~n~i~--~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~--------l~~L~~L~L~~n~l~~~~~ 85 (840)
+++|++|||++|+|. ...+..+ +.+..+.+..| .++..+|.+ +++|+.|+|.+ .++.+.+
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~------~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~ 117 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMAN------FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIED 117 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTT------EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECT
T ss_pred hccCeEEecCcceeEEecCccccc---ccccccccccc------ccCHHHhcccccccccccCCCcEEECCc-cccchhH
Confidence 788999999999998 3333223 33556666666 567888999 99999999999 8888888
Q ss_pred ccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCcc---ccccCCcccCCCCCCC-eeeccCCc-ccccCCcc
Q 003199 86 ASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQ---LAGTIPEELGNLTELT-DLDMSVNH-LSGKIPES 160 (840)
Q Consensus 86 ~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~---~~~~~p~~l~~l~~L~-~L~L~~n~-l~~~~~~~ 160 (840)
.+|.++++|+.|+|++|.+....+.+|....++..+.+..+.. .......+|.++..|+ .+.+.... +.......
T Consensus 118 ~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~ 197 (329)
T 3sb4_A 118 AAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKA 197 (329)
T ss_dssp TTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHT
T ss_pred HHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhc
Confidence 8999999999999999999878888999988888887765321 1111233455666666 44443322 11111111
Q ss_pred ccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCch
Q 003199 161 ILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQ 240 (840)
Q Consensus 161 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 240 (840)
-....+++.+.+.++-...........+++|+.|+|++|+++.+.+.+|.++.+|+.|+|.+| ++.+.+.+|.++.+|+
T Consensus 198 ~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~ 276 (329)
T 3sb4_A 198 GLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLA 276 (329)
T ss_dssp TCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred ccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhcc
Confidence 123456677777665332111222234778888888888888777777888888888888877 7777777888888887
Q ss_pred -hhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEec
Q 003199 241 -YFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDL 292 (840)
Q Consensus 241 -~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 292 (840)
.+.+.. .+..+.+.+|.++++|+.|++++|.++...+.+|.++++|+.+..
T Consensus 277 ~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 277 GTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 888877 676677888999999999999889888777778888888888753
No 376
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.71 E-value=2.8e-18 Score=202.53 Aligned_cols=148 Identities=20% Similarity=0.183 Sum_probs=67.8
Q ss_pred CCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccC
Q 003199 198 DNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSI 277 (840)
Q Consensus 198 ~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 277 (840)
.|.+. ..+..+..++.|+.|+|++|.+. .+|..+..+++|++|+|++|.+. .+|..|..+++|+.|+|++|+|+ .+
T Consensus 210 ~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 210 ENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 33433 34445555555555555555555 22222223333333333333333 44555556666666666666665 55
Q ss_pred CccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccC-cccEEEcCCCccCCCCC
Q 003199 278 PEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAI-SLVKIDLSDNLLSGPIP 350 (840)
Q Consensus 278 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p 350 (840)
|..|..+++|++|+|++|.|+ .+|..|+.+++|+.|+|++|.|++.+|..+..+. .+..|+|++|.+++.+|
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred ChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 555656666666666666555 3344455555555555555555555555443321 11224444444444443
No 377
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.70 E-value=4.9e-16 Score=169.73 Aligned_cols=268 Identities=12% Similarity=0.157 Sum_probs=123.5
Q ss_pred CCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCe
Q 003199 41 TNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQ 120 (840)
Q Consensus 41 ~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~ 120 (840)
..++.+.+..+ +..++..+|.+. +|+.+.+..+ ++.+...+|.+. +|+.+.|.. .++...+.+|..+++|+.
T Consensus 113 ~~l~~i~ip~~----i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 113 KGYNEIILPNS----VKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKK 184 (401)
T ss_dssp SSCSEEECCTT----CCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCE
T ss_pred CCccEEEECCc----cCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCe
Confidence 44555555433 444445555543 4555555444 444444455442 455555553 344344455555555555
Q ss_pred eecccCccccccCCc-ccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCC
Q 003199 121 LELYYNQQLAGTIPE-ELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDN 199 (840)
Q Consensus 121 L~L~~n~~~~~~~p~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 199 (840)
++|..|+ +. .++. +|. ..+|+.+.|..+ ++.+...+|.++++|+.+++.+| ++.+...+|.+ .+|+.+.| .+
T Consensus 185 l~l~~n~-l~-~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~ 257 (401)
T 4fdw_A 185 ADLSKTK-IT-KLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PN 257 (401)
T ss_dssp EECTTSC-CS-EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ET
T ss_pred eecCCCc-ce-EechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CC
Confidence 5555444 12 2222 232 355555555532 44444455555555555555543 34444455555 45555555 23
Q ss_pred cCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCc
Q 003199 200 SLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPE 279 (840)
Q Consensus 200 ~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 279 (840)
.++.+...+|.++++|+.+++.+|.+.. +....+...+|.++++|+.+.+.+ .++.....
T Consensus 258 ~i~~I~~~aF~~c~~L~~l~l~~~~~~~-------------------~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~ 317 (401)
T 4fdw_A 258 GVTNIASRAFYYCPELAEVTTYGSTFND-------------------DPEAMIHPYCLEGCPKLARFEIPE-SIRILGQG 317 (401)
T ss_dssp TCCEECTTTTTTCTTCCEEEEESSCCCC-------------------CTTCEECTTTTTTCTTCCEECCCT-TCCEECTT
T ss_pred CccEEChhHhhCCCCCCEEEeCCccccC-------------------CcccEECHHHhhCCccCCeEEeCC-ceEEEhhh
Confidence 3444445555555555555555554430 000112333444444444444442 23333334
Q ss_pred cccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccC-cccEEEcCCCcc
Q 003199 280 GILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAI-SLVKIDLSDNLL 345 (840)
Q Consensus 280 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l 345 (840)
+|.++++|+.+.|..| ++.+...+|.++ +|+.+++++|.+....+..|..++ ++..|++..+.+
T Consensus 318 aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 318 LLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp TTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred hhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 4444444555544332 443444445444 455555555544443344444442 444555444443
No 378
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.70 E-value=7.3e-16 Score=168.39 Aligned_cols=268 Identities=11% Similarity=0.108 Sum_probs=204.1
Q ss_pred CCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCC
Q 003199 14 SPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTS 93 (840)
Q Consensus 14 ~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 93 (840)
..+..++.+.+.++ ++.+...+|.+. +|+.+.|..| +..++..+|.+. +|+.+.+.+ .++.+.+.+|.++.+
T Consensus 110 ~~~~~l~~i~ip~~-i~~I~~~aF~~~-~L~~i~l~~~----i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~ 181 (401)
T 4fdw_A 110 EILKGYNEIILPNS-VKSIPKDAFRNS-QIAKVVLNEG----LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYN 181 (401)
T ss_dssp EECSSCSEEECCTT-CCEECTTTTTTC-CCSEEECCTT----CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTT
T ss_pred EecCCccEEEECCc-cCEehHhhcccC-CccEEEeCCC----ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCccc
Confidence 34578888888865 665778888885 7999999877 677888899884 799999986 777788889999999
Q ss_pred CcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEee
Q 003199 94 LTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLY 173 (840)
Q Consensus 94 L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 173 (840)
|+.++|.+|.++......|. ..+|+.+.|..+ +...-..+|.++++|+.+++..| ++.+...+|.+ .+|+.+.|
T Consensus 182 L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~--l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l- 255 (401)
T 4fdw_A 182 LKKADLSKTKITKLPASTFV-YAGIEEVLLPVT--LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL- 255 (401)
T ss_dssp CCEEECTTSCCSEECTTTTT-TCCCSEEECCTT--CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-
T ss_pred CCeeecCCCcceEechhhEe-ecccCEEEeCCc--hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-
Confidence 99999999999976667777 589999999855 35555668999999999999975 66677788888 78999999
Q ss_pred ccccccccchhhhcCCCCCEEEccCCcCc-----ccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhccccc
Q 003199 174 NNSLSGEISSVIANSTTLTMLSLYDNSLT-----GEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNM 248 (840)
Q Consensus 174 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-----~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~ 248 (840)
.|.++.+...+|.++++|+.+++.+|.+. .+.+.+|.++++|+.++|.+ .++.+..
T Consensus 256 p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~------------------ 316 (401)
T 4fdw_A 256 PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQ------------------ 316 (401)
T ss_dssp ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECT------------------
T ss_pred CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhh------------------
Confidence 56677788999999999999999998875 46677888888888888884 4554333
Q ss_pred ccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCC-CCceeecccceee
Q 003199 249 FSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNAR-NLSELFMQRNQIS 322 (840)
Q Consensus 249 ~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 322 (840)
.+|.++++|+.+.+.+| ++.....+|..+ +|+.+++.+|.+.......|.+++ +++.|++..+.+.
T Consensus 317 ------~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 317 ------GLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp ------TTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred ------hhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 45555666666666444 443445556665 666666666666655556666553 5666666666554
No 379
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=7e-18 Score=199.09 Aligned_cols=162 Identities=21% Similarity=0.229 Sum_probs=109.6
Q ss_pred EccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeecccc
Q 003199 98 ELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSL 177 (840)
Q Consensus 98 ~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l 177 (840)
++..|.+. ..|..|..+++|+.|+|++|. ...+|..+..+++|++|+|++|.|+ .+|..|..+++|++|+|++|.|
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~--l~~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQ--IFNISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRL 282 (727)
T ss_dssp ----------------CCCCCCEEECTTSC--CSCCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCC
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCC--CCCCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcC
Confidence 44455555 567778888888888888887 3367777778888888888888888 6788888888888888888888
Q ss_pred ccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCC-chhhhcccccccccCCcc
Q 003199 178 SGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGK-LQYFLVLQNMFSGVLPDS 256 (840)
Q Consensus 178 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~-L~~L~l~~n~~~~~~~~~ 256 (840)
+ .+|..|.++++|++|+|++|.|+ .+|..|+.+++|+.|+|++|+|++.+|..+..+.. +..+++.+|.+.+.+|..
T Consensus 283 ~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp S-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred C-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 8 55777888888888888888887 56777888888999999999888887777765432 234677778777766653
Q ss_pred cccccCCceEEeeCc
Q 003199 257 LARCKNLLRFRVSNN 271 (840)
Q Consensus 257 ~~~l~~L~~L~l~~N 271 (840)
|..|++++|
T Consensus 361 ------l~~l~l~~n 369 (727)
T 4b8c_D 361 ------RRFIEINTD 369 (727)
T ss_dssp ---------------
T ss_pred ------cceeEeecc
Confidence 445556655
No 380
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.69 E-value=1.1e-15 Score=167.88 Aligned_cols=334 Identities=8% Similarity=-0.022 Sum_probs=171.0
Q ss_pred CcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccC
Q 003199 29 FTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHI 108 (840)
Q Consensus 29 i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~ 108 (840)
++.+...+|.++.+|+.+.|..+ ++.+...+|.++++|+.++|.++ ++.+...+|.++.+|+.+.+..+ +....
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~~----i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~ 132 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPST----VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIG 132 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCTT----CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEEC
T ss_pred EeEhHHHHhhCCCCceEEEeCCC----ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeec
Confidence 44444555666666666666533 45555566666666666666543 44444556666666666555543 33244
Q ss_pred chhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcC
Q 003199 109 PPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANS 188 (840)
Q Consensus 109 p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 188 (840)
..+|.....+........ ......+|.++++|+.+.+..+-.. +....|.++.+|+.+.+..| ++.+...+|.++
T Consensus 133 ~~aF~~~~~~~~~~~~~~---~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~ 207 (394)
T 4fs7_A 133 VEAFKGCDFKEITIPEGV---TVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAEC 207 (394)
T ss_dssp TTTTTTCCCSEEECCTTC---CEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTC
T ss_pred ceeeecccccccccCccc---cccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhccc
Confidence 455555543333322222 1122345666666666666544332 45556666666666666555 444555666666
Q ss_pred CCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEe
Q 003199 189 TTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRV 268 (840)
Q Consensus 189 ~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l 268 (840)
..|+.+.+..+... + ...+....+|+.+.+..+ ++.+....|.....++.+.+..+.. ......|..+..++.+.+
T Consensus 208 ~~L~~i~~~~~~~~-i-~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~ 283 (394)
T 4fs7_A 208 ILLENMEFPNSLYY-L-GDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIY 283 (394)
T ss_dssp TTCCBCCCCTTCCE-E-CTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEE
T ss_pred cccceeecCCCceE-e-ehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcc-eeeccccccccccceecc
Confidence 66666666655443 2 222333455666655433 2223333444444444444433322 134445555566666555
Q ss_pred eCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCC
Q 003199 269 SNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGP 348 (840)
Q Consensus 269 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 348 (840)
..+.+. ...|....+|+.+.+..+ ++.+...+|.++.+|+.++|..+ ++.+...+|.++.+|+.+++..| ++..
T Consensus 284 ~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I 357 (394)
T 4fs7_A 284 GSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKI 357 (394)
T ss_dssp CSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEE
T ss_pred Cceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEe
Confidence 554332 234555556666655543 44444555666666666666433 44444555555555666655544 4434
Q ss_pred CCCcccCccccchhcccCCccCCCcchhcccccCCCE
Q 003199 349 IPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNV 385 (840)
Q Consensus 349 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 385 (840)
...+|.++.+|+.+++..+ ++ .+..+|.++++|+.
T Consensus 358 ~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 358 GANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp CTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred hHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 4445555555665555443 22 23345555555543
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.1e-16 Score=153.11 Aligned_cols=136 Identities=17% Similarity=0.143 Sum_probs=117.2
Q ss_pred cCCceEEeeCceee-ccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEE
Q 003199 261 KNLLRFRVSNNHLE-GSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKID 339 (840)
Q Consensus 261 ~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 339 (840)
++|++|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 67899999999997 67888888899999999999999876 7788899999999999999977888888899999999
Q ss_pred cCCCccCCCC-CCcccCccccchhcccCCccCCCcc---hhcccccCCCEEECcCccccccCCc
Q 003199 340 LSDNLLSGPI-PSGIGNLKKLNLLMLQSNKLNSSIP---NSLSSLKSLNVLDLSNNLLTGYIPE 399 (840)
Q Consensus 340 Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~~~~p~ 399 (840)
|++|++++.. +..+..+++|+.|+|++|++++..+ ..+..+++|++|++++|.+. .+|.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 9999998643 2678899999999999999986655 58899999999999999987 4554
No 382
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.66 E-value=2e-15 Score=165.80 Aligned_cols=319 Identities=11% Similarity=0.031 Sum_probs=249.3
Q ss_pred ccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCC
Q 003199 55 KLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIP 134 (840)
Q Consensus 55 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p 134 (840)
.++++...+|.++.+|+.+.|.. .++.+-..+|.++.+|+.++|..+ ++.....+|..+++|+.+.+..+- .....
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l--~~i~~ 133 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLML--KSIGV 133 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTC--CEECT
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCce--eeecc
Confidence 57788899999999999999975 477787889999999999999866 665677899999999999887653 43444
Q ss_pred cccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCC
Q 003199 135 EELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSP 214 (840)
Q Consensus 135 ~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~ 214 (840)
.+|.+...+........ ..+...+|.++++|+.+.+.++- ..+...+|.++.+|+.+.+..| ++.+...+|.++..
T Consensus 134 ~aF~~~~~~~~~~~~~~--~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~ 209 (394)
T 4fs7_A 134 EAFKGCDFKEITIPEGV--TVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECIL 209 (394)
T ss_dssp TTTTTCCCSEEECCTTC--CEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTT
T ss_pred eeeecccccccccCccc--cccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccc
Confidence 56777654443333332 33456789999999999998765 4477889999999999999887 66577889999999
Q ss_pred cceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccC
Q 003199 215 LVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSY 294 (840)
Q Consensus 215 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~ 294 (840)
|+.+.+..+... +...+.....|+.+.+..+ +......+|..+.+|+.+.+..+... .....|.....++.+....
T Consensus 210 L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~ 285 (394)
T 4fs7_A 210 LENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGS 285 (394)
T ss_dssp CCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECS
T ss_pred cceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCc
Confidence 999999877553 2333444466777766543 34455677888999999999888665 6677888888999888877
Q ss_pred CcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCCccCCCcc
Q 003199 295 NSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIP 374 (840)
Q Consensus 295 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 374 (840)
+.+ ....|..+.+|+.+.+.++ ++.+...+|.++.+|+.++|..+ ++..-..+|.++.+|+.+++..| ++.+..
T Consensus 286 ~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~ 359 (394)
T 4fs7_A 286 VIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGA 359 (394)
T ss_dssp SEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECT
T ss_pred eee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehH
Confidence 654 3457888899999999776 66677788889999999999755 66566678999999999999877 776677
Q ss_pred hhcccccCCCEEECcCc
Q 003199 375 NSLSSLKSLNVLDLSNN 391 (840)
Q Consensus 375 ~~~~~l~~L~~L~l~~N 391 (840)
.+|.++++|+.+++..|
T Consensus 360 ~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 360 NAFQGCINLKKVELPKR 376 (394)
T ss_dssp TTBTTCTTCCEEEEEGG
T ss_pred HHhhCCCCCCEEEECCC
Confidence 89999999999998754
No 383
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=3.1e-16 Score=153.44 Aligned_cols=91 Identities=22% Similarity=0.318 Sum_probs=50.1
Q ss_pred cccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCccc
Q 003199 257 LARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLV 336 (840)
Q Consensus 257 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 336 (840)
|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+|++..|..+..+++|+
T Consensus 50 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 129 (192)
T 1w8a_A 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT 129 (192)
T ss_dssp GGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCC
T ss_pred cccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCC
Confidence 44455555555555555544455555555555555555555555555555555555555555555555555555555555
Q ss_pred EEEcCCCccCC
Q 003199 337 KIDLSDNLLSG 347 (840)
Q Consensus 337 ~L~Ls~N~l~~ 347 (840)
.|+|++|++.+
T Consensus 130 ~L~L~~N~l~c 140 (192)
T 1w8a_A 130 SLNLASNPFNC 140 (192)
T ss_dssp EEECTTCCBCC
T ss_pred EEEeCCCCccC
Confidence 55555555553
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.64 E-value=5.7e-16 Score=149.53 Aligned_cols=133 Identities=23% Similarity=0.262 Sum_probs=109.9
Q ss_pred CceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCC
Q 003199 263 LLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSD 342 (840)
Q Consensus 263 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 342 (840)
.+.+++++|+++ .+|..+. ++|+.|++++|++++..+..|+.+++|++|+|++|++++..+..+..+++|+.|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467888888887 5565443 6888899999988887777788888999999999998877667778888999999999
Q ss_pred CccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccCC
Q 003199 343 NLLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 343 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 398 (840)
|++++..+..+..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99987777778888999999999999987767677888999999999999887665
No 385
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.64 E-value=9.6e-17 Score=170.60 Aligned_cols=146 Identities=13% Similarity=0.096 Sum_probs=100.6
Q ss_pred cCccCeeeccCCcEEEEEEeCCCcEEEEEEeccccccccc----Cc------h--hhHHHHHHHHHHHHHHhccCCCCcc
Q 003199 528 MTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSA----SD------T--DQLQLDKGLKTEVETLGNIRHKNIV 595 (840)
Q Consensus 528 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~----~~------~--~~~~~~~~~~~E~~~l~~l~h~niv 595 (840)
|...+.||+|++|.||+|...+|+.||||+++........ .. . ..........+|+..+.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7788899999999999998889999999998543221000 00 0 0001111223566666666544432
Q ss_pred eeeeEEecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCC-
Q 003199 596 KLYCYFSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQ- 674 (840)
Q Consensus 596 ~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~- 674 (840)
...-+.. ...++||||++++.|.+... .+....++.|++.+|.|||+ .|||||||||.|||+++++.
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~-------~~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSS-------VPDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCC-------CSCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEECS
T ss_pred CCeeeec--cCceEEEEecCCccHhhhcc-------cHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCCCc
Confidence 1111111 23479999999988865432 22356788999999999999 99999999999999988763
Q ss_pred ---------Ceeecccchhh
Q 003199 675 ---------PKVADFGIAKV 685 (840)
Q Consensus 675 ---------~kl~Dfg~a~~ 685 (840)
+.|+||+-+..
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEE
T ss_pred ccccccccceEEEEeCCccc
Confidence 78999997644
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.63 E-value=7.3e-16 Score=150.71 Aligned_cols=130 Identities=26% Similarity=0.325 Sum_probs=99.8
Q ss_pred ceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCC
Q 003199 264 LRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDN 343 (840)
Q Consensus 264 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 343 (840)
+.+++++|.++ .+|..+. ++|+.|+|++|+++ .+|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46777788777 5665543 57888888888887 34467777888888888888888777777888888888888888
Q ss_pred ccCCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccccC
Q 003199 344 LLSGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTGYI 397 (840)
Q Consensus 344 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 397 (840)
+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|++.+..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 888777777888888888888888888666667888888888888888887543
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=2.4e-16 Score=147.48 Aligned_cols=129 Identities=16% Similarity=0.171 Sum_probs=112.2
Q ss_pred ccCCceEEeeCceee-ccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEE
Q 003199 260 CKNLLRFRVSNNHLE-GSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKI 338 (840)
Q Consensus 260 l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 338 (840)
.++|+.|++++|.++ +.+|..+..+++|+.|++++|++++. ..++.+++|+.|+|++|++++.+|..+..+++|+.|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 468899999999998 77888888999999999999999876 778889999999999999997788888889999999
Q ss_pred EcCCCccCCC-CCCcccCccccchhcccCCccCCCcc---hhcccccCCCEEECcC
Q 003199 339 DLSDNLLSGP-IPSGIGNLKKLNLLMLQSNKLNSSIP---NSLSSLKSLNVLDLSN 390 (840)
Q Consensus 339 ~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~~---~~~~~l~~L~~L~l~~ 390 (840)
++++|++++. .+..++.+++|+.|++++|++++..+ ..+..+++|+.||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999863 34778899999999999999987666 5788999999999874
No 388
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=1.2e-15 Score=145.85 Aligned_cols=132 Identities=24% Similarity=0.266 Sum_probs=83.8
Q ss_pred CCCCEEeCCCCCCCccC--CCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCC
Q 003199 41 TNLEVLSFNENPGFKLW--KLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNL 118 (840)
Q Consensus 41 ~~L~~L~L~~N~~~~l~--~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L 118 (840)
++|++|+|++| .+. .+|. .+..+++|++|++++|.+++. ..+..+++|++|+|++|++++.+|..+..+++|
T Consensus 24 ~~L~~L~l~~n---~l~~~~i~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 97 (168)
T 2ell_A 24 AAVRELVLDNC---KSNDGKIEG-LTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNL 97 (168)
T ss_dssp TSCSEEECCSC---BCBTTBCSS-CCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTC
T ss_pred ccCCEEECCCC---CCChhhHHH-HHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCC
Confidence 44555555555 233 3332 245555566666666665543 556667777777777777775566666667777
Q ss_pred CeeecccCccccccCC--cccCCCCCCCeeeccCCcccccCC---ccccCCCCCcEEEeeccccccc
Q 003199 119 RQLELYYNQQLAGTIP--EELGNLTELTDLDMSVNHLSGKIP---ESILRLPKLRVLQLYNNSLSGE 180 (840)
Q Consensus 119 ~~L~L~~n~~~~~~~p--~~l~~l~~L~~L~L~~n~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~ 180 (840)
+.|+|++|+ + ..+| ..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+...
T Consensus 98 ~~L~Ls~N~-l-~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 98 THLNLSGNK-L-KDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CEEECBSSS-C-CSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred CEEeccCCc-c-CcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 777777776 2 2232 567777777888888887775444 3677778888888888877643
No 389
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=2.4e-15 Score=147.02 Aligned_cols=126 Identities=25% Similarity=0.272 Sum_probs=72.9
Q ss_pred EEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeecc
Q 003199 96 DLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNN 175 (840)
Q Consensus 96 ~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 175 (840)
.+++++|.++ .+|..+. ++|+.|+|++|+ ...+|..|.++++|++|+|++|.|+++.+..|.++++|++|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~--i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQ--FTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSC--CCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCc--CchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4455555554 3333321 345555555554 2244455555556666666666666555555666666666666666
Q ss_pred ccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceecccccccc
Q 003199 176 SLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLS 226 (840)
Q Consensus 176 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 226 (840)
+|+++.+..|.++++|++|+|++|+|+.+.+..|..+++|+.|+|++|++.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 666665666666666666666666666555555666666666666666665
No 390
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=1.3e-15 Score=142.46 Aligned_cols=127 Identities=23% Similarity=0.301 Sum_probs=56.9
Q ss_pred ccccEEEecCcccc-ccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCee
Q 003199 68 TKLRIMVLATCALH-GQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDL 146 (840)
Q Consensus 68 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L 146 (840)
++|+.|++++|.+. +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|+ +.+.+|..+..+++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~-i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNR-VSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSC-CCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCc-ccchHHHHhhhCCCCCEE
Confidence 34455555555554 34444555555555555555555532 344444444444444443 222233333334444444
Q ss_pred eccCCccccc-CCccccCCCCCcEEEeeccccccccc---hhhhcCCCCCEEEcc
Q 003199 147 DMSVNHLSGK-IPESILRLPKLRVLQLYNNSLSGEIS---SVIANSTTLTMLSLY 197 (840)
Q Consensus 147 ~L~~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~L~ 197 (840)
++++|.+++. .+..+..+++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 4444444432 12334444444444444444443333 334444444444443
No 391
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=1.3e-14 Score=140.06 Aligned_cols=129 Identities=26% Similarity=0.264 Sum_probs=71.3
Q ss_pred cEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeec
Q 003199 95 TDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYN 174 (840)
Q Consensus 95 ~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 174 (840)
+.+++++|.++ .+|..+ .++|+.|++++|+ +.+..+..|..+++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 10 ~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~-l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLT-SVPTGI--PSSATRLELESNK-LQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCS-SCCTTC--CTTCSEEECCSSC-CCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCc-cCCCCC--CCCCcEEEeCCCc-ccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 34444444444 233222 2345555555554 2222233345555566666666666544444556666666666666
Q ss_pred cccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccc
Q 003199 175 NSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSG 227 (840)
Q Consensus 175 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~ 227 (840)
|+|++.++..|..+++|++|+|++|++++..+..+..+++|+.|+|++|++.+
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 66665555556666666666666666665544455666666666666666653
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3.1e-15 Score=144.18 Aligned_cols=134 Identities=17% Similarity=0.194 Sum_probs=109.3
Q ss_pred ccccccCCceEEeeCceeeccCCccccCC-CcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCc
Q 003199 256 SLARCKNLLRFRVSNNHLEGSIPEGILSL-PHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAIS 334 (840)
Q Consensus 256 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 334 (840)
.+..+.+|+.|++++|+++ .+|. +..+ ++|+.|++++|.+++. ..|+.+++|+.|+|++|+|++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4667788999999999998 4554 4444 4899999999999875 67888999999999999998765566688899
Q ss_pred ccEEEcCCCccCCCCCC--cccCccccchhcccCCccCCCcch----hcccccCCCEEECcCccccc
Q 003199 335 LVKIDLSDNLLSGPIPS--GIGNLKKLNLLMLQSNKLNSSIPN----SLSSLKSLNVLDLSNNLLTG 395 (840)
Q Consensus 335 L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~l~~N~l~~ 395 (840)
|+.|+|++|+++ .+|. .++.+++|+.|+|++|+++ .+|. .+..+++|+.||+++|.+..
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 999999999997 4555 7888899999999999997 4555 48889999999999998763
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=7.9e-15 Score=141.27 Aligned_cols=106 Identities=20% Similarity=0.193 Sum_probs=71.0
Q ss_pred cccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCc--ccCCCCCCCee
Q 003199 69 KLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPE--ELGNLTELTDL 146 (840)
Q Consensus 69 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~--~l~~l~~L~~L 146 (840)
+|+.|+|++|.+++. ..|+.+++|++|+|++|+|++..+..|..+++|+.|+|++|+ .+.+|. .+..+++|++|
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~--i~~~~~~~~l~~l~~L~~L 118 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNS--LVELGDLDPLASLKSLTYL 118 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCC--CCCGGGGGGGGGCTTCCEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCc--CCcchhhHhhhcCCCCCEE
Confidence 445555555555443 456667777777777777775544555777777777777776 244554 67777788888
Q ss_pred eccCCcccccCCcc----ccCCCCCcEEEeecccccc
Q 003199 147 DMSVNHLSGKIPES----ILRLPKLRVLQLYNNSLSG 179 (840)
Q Consensus 147 ~L~~n~l~~~~~~~----~~~l~~L~~L~L~~N~l~~ 179 (840)
++++|.++. .|.. +..+++|+.|++++|.+..
T Consensus 119 ~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 119 CILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp ECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred EecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 888888873 4543 7778888888888887763
No 394
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.52 E-value=4.6e-13 Score=146.93 Aligned_cols=163 Identities=10% Similarity=0.075 Sum_probs=97.9
Q ss_pred cCCCCcccccccc-cccEEEecCccccccCCccccCCCCCcEEEccCCc---ccccCchhhhcCCCCCeeecccCccccc
Q 003199 56 LWKLPESSIFRLT-KLRIMVLATCALHGQIPASIGNVTSLTDLELTGNF---ITGHIPPEIGLLKNLRQLELYYNQQLAG 131 (840)
Q Consensus 56 l~~l~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~---i~~~~p~~~~~l~~L~~L~L~~n~~~~~ 131 (840)
++.+...+|.+.. .|+.+.+..+ ++.+-..+|.++.+|+.+.+..|. ++.....+|..+.+|+.+.+..+- ..
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~~--~~ 127 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDSV--TE 127 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTTC--SE
T ss_pred eeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCcc--ce
Confidence 4455556666653 4666666543 555666667777777777766553 444445666667777766665442 33
Q ss_pred cCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCC
Q 003199 132 TIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQ 211 (840)
Q Consensus 132 ~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~ 211 (840)
....+|.++.+|+.+.+..+- ..+....|..+.+|+.+.+..+ +..+...+|.+ ..|+.+.+..+-.. +...+|..
T Consensus 128 I~~~aF~~c~~L~~i~lp~~~-~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af~~ 203 (394)
T 4gt6_A 128 IDSEAFHHCEELDTVTIPEGV-TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAFSE 203 (394)
T ss_dssp ECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTTTT
T ss_pred ehhhhhhhhccccccccccee-eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchhhh
Confidence 334456677777777776443 3355566777777777777654 44455555654 56777777655443 55566666
Q ss_pred CCCcceeccccccc
Q 003199 212 WSPLVVLDLSENKL 225 (840)
Q Consensus 212 l~~L~~L~L~~N~l 225 (840)
+.+|.......+..
T Consensus 204 c~~l~~~~~~~~~~ 217 (394)
T 4gt6_A 204 CFALSTITSDSESY 217 (394)
T ss_dssp CTTCCEEEECCSSS
T ss_pred ccccceeccccccc
Confidence 66666666555543
No 395
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.51 E-value=7.9e-13 Score=145.02 Aligned_cols=336 Identities=10% Similarity=0.088 Sum_probs=186.2
Q ss_pred cccCCccccCCC-CCCEEeCCCCCCCccCCCCcccccccccccEEEecCcc---ccccCCccccCCCCCcEEEccCCccc
Q 003199 30 TGQFPLSVFNLT-NLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCA---LHGQIPASIGNVTSLTDLELTGNFIT 105 (840)
Q Consensus 30 ~~~~p~~~~~l~-~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~---l~~~~~~~~~~l~~L~~L~L~~n~i~ 105 (840)
+.+...+|.+.. .|+.+.+..+ ++.+...+|.++++|+.+.+..|. ++.+-..+|.++.+|+.+.+..+ ++
T Consensus 52 t~Ig~~aF~~~~~~L~sI~iP~s----vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~ 126 (394)
T 4gt6_A 52 SKIGDRVFCNYKYVLTSVQIPDT----VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VT 126 (394)
T ss_dssp EEECTTTTTTCCSCCCEEEECTT----CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CS
T ss_pred eEcCHhhccCCCCcCEEEEECCC----eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cc
Confidence 334444555543 3666666543 455555666666666666665542 44444556666666666655544 33
Q ss_pred ccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhh
Q 003199 106 GHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVI 185 (840)
Q Consensus 106 ~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 185 (840)
......|....+|+.+.+..+- ......+|.++.+|+.+.+..+ +..+...+|.. ..|+.+.+..+-.. +...+|
T Consensus 127 ~I~~~aF~~c~~L~~i~lp~~~--~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-i~~~af 201 (394)
T 4gt6_A 127 EIDSEAFHHCEELDTVTIPEGV--TSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-IGTNAF 201 (394)
T ss_dssp EECTTTTTTCTTCCEEECCTTC--CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-ECTTTT
T ss_pred eehhhhhhhhccccccccccee--eeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-cccchh
Confidence 3445566666666666665442 2233345666666776666554 33344445543 45677766654332 555666
Q ss_pred hcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCce
Q 003199 186 ANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLR 265 (840)
Q Consensus 186 ~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~ 265 (840)
.++..|+......+.........+........... .+.....+..+.+. +.+......+|..+.+|+.
T Consensus 202 ~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~ 269 (394)
T 4gt6_A 202 SECFALSTITSDSESYPAIDNVLYEKSANGDYALI-----------RYPSQREDPAFKIP-NGVARIETHAFDSCAYLAS 269 (394)
T ss_dssp TTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEE-----------ECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCE
T ss_pred hhccccceecccccccccccceeeccccccccccc-----------ccccccccceEEcC-CcceEcccceeeecccccE
Confidence 77777777666655544211111111000000000 00001111111111 1223344566777778888
Q ss_pred EEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCcc
Q 003199 266 FRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLL 345 (840)
Q Consensus 266 L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 345 (840)
+.+.++... ....+|..++.|+.+.+. +.++.+...+|.++.+|+.+.|..+ ++.+...+|.++.+|+.+.|..+ +
T Consensus 270 i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v 345 (394)
T 4gt6_A 270 VKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-V 345 (394)
T ss_dssp EECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-C
T ss_pred Eecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-c
Confidence 877766554 556677777888888875 4566666778888888888888765 66566777888888888888654 5
Q ss_pred CCCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCcccc
Q 003199 346 SGPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLT 394 (840)
Q Consensus 346 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 394 (840)
+..-..+|.++.+|+.+++.+|... ..++....+|+.+.+..|.+.
T Consensus 346 ~~I~~~aF~~C~~L~~i~~~~~~~~---~~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 346 TKIPESAFSNCTALNNIEYSGSRSQ---WNAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp CBCCGGGGTTCTTCCEEEESSCHHH---HHTCBCCCCC-----------
T ss_pred CEEhHhHhhCCCCCCEEEECCceee---hhhhhccCCCCEEEeCCCCEE
Confidence 5455567888888888888887653 256777788888887766543
No 396
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=2.5e-16 Score=155.02 Aligned_cols=132 Identities=25% Similarity=0.337 Sum_probs=74.0
Q ss_pred ccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcc
Q 003199 256 SLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISL 335 (840)
Q Consensus 256 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 335 (840)
.+..+++|++|++++|.+++ +| .+..+++|+.|++++|+++. +|..+..+++|+.|+|++|++++ +| .+..+++|
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~-l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L 117 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIAS-LS-GIEKLVNL 117 (198)
T ss_dssp HHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-CSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHS
T ss_pred HHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-ccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCC
Confidence 55666666666666666653 44 55555666666666666652 34444445566666666666654 23 45555666
Q ss_pred cEEEcCCCccCCCCC-CcccCccccchhcccCCccCCCcch----------hcccccCCCEEECcCcccc
Q 003199 336 VKIDLSDNLLSGPIP-SGIGNLKKLNLLMLQSNKLNSSIPN----------SLSSLKSLNVLDLSNNLLT 394 (840)
Q Consensus 336 ~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~----------~~~~l~~L~~L~l~~N~l~ 394 (840)
+.|+|++|++++..+ ..+..+++|+.|++++|++++.+|. .+..+++|+.|| +|+++
T Consensus 118 ~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 118 RVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 666666666653221 2455556666666666666544333 255666666665 55554
No 397
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=1.6e-16 Score=156.45 Aligned_cols=152 Identities=25% Similarity=0.287 Sum_probs=87.6
Q ss_pred cccccEEEecCccccccCCc------cccCCCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCC
Q 003199 67 LTKLRIMVLATCALHGQIPA------SIGNVTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNL 140 (840)
Q Consensus 67 l~~L~~L~L~~n~l~~~~~~------~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l 140 (840)
...++.++++.+.+.+..|. .+..+++|++|+|++|.+++ +| .+..+++|+.|+|++|+ ...+|..+..+
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~--l~~l~~~~~~~ 92 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNL--IKKIENLDAVA 92 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEE--ECSCSSHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCC--cccccchhhcC
Confidence 34444444444444444443 56666666666666666663 44 66666666666666665 22455555555
Q ss_pred CCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccc-hhhhcCCCCCEEEccCCcCcccCCcC----------C
Q 003199 141 TELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEIS-SVIANSTTLTMLSLYDNSLTGEVPQD----------L 209 (840)
Q Consensus 141 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~----------l 209 (840)
++|++|+|++|++++ +| .+..+++|++|++++|++++... ..+..+++|++|++++|++.+..|.. +
T Consensus 93 ~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~ 170 (198)
T 1ds9_A 93 DTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVV 170 (198)
T ss_dssp HHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHH
T ss_pred CcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHH
Confidence 666666666666664 23 45566666666666666664332 45666666666666666665443332 4
Q ss_pred CCCCCcceecccccccc
Q 003199 210 GQWSPLVVLDLSENKLS 226 (840)
Q Consensus 210 ~~l~~L~~L~L~~N~l~ 226 (840)
..+++|+.|| +|.++
T Consensus 171 ~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 171 KRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHCSSCSEEC--CGGGT
T ss_pred HhCCCcEEEC--CcccC
Confidence 5556666655 45444
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1e-13 Score=132.43 Aligned_cols=109 Identities=26% Similarity=0.279 Sum_probs=83.8
Q ss_pred ccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccC
Q 003199 287 VSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQS 366 (840)
Q Consensus 287 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 366 (840)
.+.+++++|+++.++ ..+ .++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~ip-~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLASVP-TGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSSCC-SCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCccC-ccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 456667777766433 323 26677777777777777777778888888888888888877677778888888899999
Q ss_pred CccCCCcchhcccccCCCEEECcCccccccCC
Q 003199 367 NKLNSSIPNSLSSLKSLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 367 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 398 (840)
|+|++..+..|..+++|++|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 98887777778889999999999999886554
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=3.2e-13 Score=129.39 Aligned_cols=106 Identities=21% Similarity=0.273 Sum_probs=74.2
Q ss_pred cEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCccccchhcccCC
Q 003199 288 SIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNLKKLNLLMLQSN 367 (840)
Q Consensus 288 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 367 (840)
+.+++++|+++.+ |..+ .++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~i-P~~~--~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLASV-PAGI--PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCcc-CCCc--CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 4555566655533 2222 256666777777776666666777777777777777777655556777888888888888
Q ss_pred ccCCCcchhcccccCCCEEECcCcccccc
Q 003199 368 KLNSSIPNSLSSLKSLNVLDLSNNLLTGY 396 (840)
Q Consensus 368 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 396 (840)
+|++..+..|..+++|++|+|++|+|.+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 88866666688888888888888888854
No 400
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=4.6e-13 Score=127.85 Aligned_cols=108 Identities=21% Similarity=0.262 Sum_probs=94.6
Q ss_pred CceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCC
Q 003199 263 LLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSD 342 (840)
Q Consensus 263 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 342 (840)
.+.+++++|+++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 468899999998 5776663 7899999999999998899999999999999999999977777788999999999999
Q ss_pred CccCCCCCCcccCccccchhcccCCccCCCc
Q 003199 343 NLLSGPIPSGIGNLKKLNLLMLQSNKLNSSI 373 (840)
Q Consensus 343 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 373 (840)
|+|++..+..|..+++|+.|+|++|+++...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 9999777778999999999999999998543
No 401
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.38 E-value=1.3e-12 Score=125.01 Aligned_cols=104 Identities=21% Similarity=0.222 Sum_probs=67.1
Q ss_pred CeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEccC
Q 003199 119 RQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSLYD 198 (840)
Q Consensus 119 ~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 198 (840)
+.+++++|+ ...+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++++..|..+++|++|+|++
T Consensus 15 ~~l~~~~n~--l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIR--LASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSC--CSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCC--CCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 344555444 234444332 5666666666666666666666777777777777777766666666777777777777
Q ss_pred CcCcccCCcCCCCCCCcceecccccccc
Q 003199 199 NSLTGEVPQDLGQWSPLVVLDLSENKLS 226 (840)
Q Consensus 199 N~l~~~~~~~l~~l~~L~~L~L~~N~l~ 226 (840)
|+|+++.+..|..+++|+.|+|++|++.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcc
Confidence 7777555555777777777777777766
No 402
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.32 E-value=7.9e-14 Score=150.77 Aligned_cols=183 Identities=19% Similarity=0.167 Sum_probs=100.7
Q ss_pred CCCCEEeCCCCCCCccCCCCccccccc-----ccccEEEecCccccccCCccc-cCCCCCcEEEccCCcccccCchhhh-
Q 003199 41 TNLEVLSFNENPGFKLWKLPESSIFRL-----TKLRIMVLATCALHGQIPASI-GNVTSLTDLELTGNFITGHIPPEIG- 113 (840)
Q Consensus 41 ~~L~~L~L~~N~~~~l~~l~~~~~~~l-----~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~i~~~~p~~~~- 113 (840)
++|+.|+|++| .+.......+... ++|+.|+|++|.+.......+ ..+++|++|+|++|.|++.....+.
T Consensus 72 ~~L~~L~Ls~n---~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~ 148 (372)
T 3un9_A 72 SSLRQLNLAGV---RMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRD 148 (372)
T ss_dssp TTCCEEECTTS---CCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHH
T ss_pred hhCCEEEecCC---CCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHH
Confidence 45666666666 3333222233322 466666666666643322222 2345667777777777644333332
Q ss_pred ----cCCCCCeeecccCcccc---ccCCcccCCCCCCCeeeccCCcccccC----CccccCCCCCcEEEeecccccccc-
Q 003199 114 ----LLKNLRQLELYYNQQLA---GTIPEELGNLTELTDLDMSVNHLSGKI----PESILRLPKLRVLQLYNNSLSGEI- 181 (840)
Q Consensus 114 ----~l~~L~~L~L~~n~~~~---~~~p~~l~~l~~L~~L~L~~n~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~- 181 (840)
..++|++|+|++|.+.. ..++..+..+++|++|+|++|.|+... +..+...++|++|+|++|.|++..
T Consensus 149 ~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~ 228 (372)
T 3un9_A 149 LLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAA 228 (372)
T ss_dssp HHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHH
T ss_pred HHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHH
Confidence 34667777777776211 123334456677777777777776422 345566677888888888887533
Q ss_pred ---chhhhcCCCCCEEEccCCcCcccCCcCCCCC---C--Ccceec--ccccccc
Q 003199 182 ---SSVIANSTTLTMLSLYDNSLTGEVPQDLGQW---S--PLVVLD--LSENKLS 226 (840)
Q Consensus 182 ---~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l---~--~L~~L~--L~~N~l~ 226 (840)
...+...++|++|+|++|.|+......+..+ . .|+.+. +..|.++
T Consensus 229 ~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 229 LALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp HHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred HHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 3345556788888888888874333322221 2 266666 6666665
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=3.1e-14 Score=153.99 Aligned_cols=111 Identities=23% Similarity=0.228 Sum_probs=49.2
Q ss_pred CCCcEEEccCCcccccCchhhhcC-----CCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccc-----
Q 003199 92 TSLTDLELTGNFITGHIPPEIGLL-----KNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESI----- 161 (840)
Q Consensus 92 ~~L~~L~L~~n~i~~~~p~~~~~l-----~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~----- 161 (840)
++|++|+|++|.|+......+... ++|+.|+|++|.+....+......+++|++|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 456777777777764433333332 4556666655542111111111223345555555555543222222
Q ss_pred cCCCCCcEEEeecccccccc----chhhhcCCCCCEEEccCCcCc
Q 003199 162 LRLPKLRVLQLYNNSLSGEI----SSVIANSTTLTMLSLYDNSLT 202 (840)
Q Consensus 162 ~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 202 (840)
...++|++|+|++|.|+... +..+..+++|++|+|++|+|+
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~ 196 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLG 196 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCC
Confidence 12344555555555544321 222234444555555555444
No 404
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.29 E-value=2e-10 Score=125.26 Aligned_cols=317 Identities=9% Similarity=0.022 Sum_probs=163.5
Q ss_pred CCCCCCCCCCEEecCCCcCcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccC
Q 003199 11 PDFSPMQNLRRLDLSNNLFTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGN 90 (840)
Q Consensus 11 ~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 90 (840)
|.|....+|+.+.+... ++.+...+|.++.+|+.+.|..+ +..+...+|.+. +|+.+.+..+ ++.+...+|..
T Consensus 40 ~~~~~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~----v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~ 112 (379)
T 4h09_A 40 PWYKDRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST----VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG 112 (379)
T ss_dssp TTGGGGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT----CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT
T ss_pred cccccccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc----ceEechhhhcCC-CCceEECCce-eeEeccceecc
Confidence 34455566777777643 55456666777777777777543 556666666665 4555555433 44444455554
Q ss_pred CCCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEE
Q 003199 91 VTSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVL 170 (840)
Q Consensus 91 l~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 170 (840)
.+|+.+.+..+-.. .....|... +|+.+.+-.+- .......|.....++.+.+..+.........+.
T Consensus 113 -~~L~~i~lp~~~~~-i~~~~F~~~-~l~~~~~~~~v--~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~-------- 179 (379)
T 4h09_A 113 -TDLDDFEFPGATTE-IGNYIFYNS-SVKRIVIPKSV--TTIKDGIGYKAENLEKIEVSSNNKNYVAENYVL-------- 179 (379)
T ss_dssp -CCCSEEECCTTCCE-ECTTTTTTC-CCCEEEECTTC--CEECSCTTTTCTTCCEEEECTTCSSEEEETTEE--------
T ss_pred -CCcccccCCCcccc-ccccccccc-eeeeeecccee--eccccchhcccccccccccccccceeeccccee--------
Confidence 35666666654332 333444433 44444444331 222233455555565555544332211000000
Q ss_pred EeeccccccccchhhhcCCCCCEEEccCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhccccccc
Q 003199 171 QLYNNSLSGEISSVIANSTTLTMLSLYDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFS 250 (840)
Q Consensus 171 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~ 250 (840)
.+.. ......+.....+..+.+..+.-. .....+....+|+.+.+..+ +.......|.....|+.+.+..+ +.
T Consensus 180 ---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~ 252 (379)
T 4h09_A 180 ---YNKN-KTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VT 252 (379)
T ss_dssp ---EETT-SSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CC
T ss_pred ---cccc-cceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-cc
Confidence 0000 011112233334444444333222 33334444445555544433 23334444444555555544433 33
Q ss_pred ccCCcccccccCCceEEeeCceeeccCCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhc
Q 003199 251 GVLPDSLARCKNLLRFRVSNNHLEGSIPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIY 330 (840)
Q Consensus 251 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 330 (840)
.+...+|..+.+|+.+.+..+ ++......|..+.+|+.+.+.++.++.+...+|.++.+|+.+.|..+ ++.+...+|.
T Consensus 253 ~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~ 330 (379)
T 4h09_A 253 SIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFK 330 (379)
T ss_dssp EECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT
T ss_pred EeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhh
Confidence 344556666677777776543 44344556666777777777777776666677777777777777654 5555666777
Q ss_pred ccCcccEEEcCCCccCCCCCCcccCcc
Q 003199 331 RAISLVKIDLSDNLLSGPIPSGIGNLK 357 (840)
Q Consensus 331 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 357 (840)
++.+|+.+.+..+ ++..-..+|.++.
T Consensus 331 ~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 331 NCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp TCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred CCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 7777777777554 4434445565553
No 405
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.27 E-value=3.7e-10 Score=123.11 Aligned_cols=314 Identities=8% Similarity=0.028 Sum_probs=153.5
Q ss_pred ccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCCcccccCchhhhcCC
Q 003199 37 VFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGNFITGHIPPEIGLLK 116 (840)
Q Consensus 37 ~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~~l~ 116 (840)
+....+|+.+.+..+ ++.++..+|.++.+|+.+.|..+ ++.+-..+|.+. +|+.+.+..+ ++.....+|.. .
T Consensus 42 ~~~~~~i~~v~ip~~----vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~ 113 (379)
T 4h09_A 42 YKDRDRISEVRVNSG----ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-T 113 (379)
T ss_dssp GGGGGGCSEEEECTT----EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-C
T ss_pred cccccCCEEEEeCCC----ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-C
Confidence 444566777777654 66667777777777777777543 555555666665 5666665543 33233444444 2
Q ss_pred CCCeeecccCccccccCCcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccccccccchhhhcCCCCCEEEc
Q 003199 117 NLRQLELYYNQQLAGTIPEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNSLSGEISSVIANSTTLTMLSL 196 (840)
Q Consensus 117 ~L~~L~L~~n~~~~~~~p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 196 (840)
+|+.+.+..+- ......+|.+ .+|+.+.+..+ ++.+....|..+..++.+.+..+.........+..
T Consensus 114 ~L~~i~lp~~~--~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~--------- 180 (379)
T 4h09_A 114 DLDDFEFPGAT--TEIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLY--------- 180 (379)
T ss_dssp CCSEEECCTTC--CEECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEE---------
T ss_pred CcccccCCCcc--cccccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceec---------
Confidence 56666665442 2112222332 24444444332 22234445555555555555444332111111000
Q ss_pred cCCcCcccCCcCCCCCCCcceeccccccccccCCccccCCCCchhhhcccccccccCCcccccccCCceEEeeCceeecc
Q 003199 197 YDNSLTGEVPQDLGQWSPLVVLDLSENKLSGPLPAKVCSRGKLQYFLVLQNMFSGVLPDSLARCKNLLRFRVSNNHLEGS 276 (840)
Q Consensus 197 ~~N~l~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 276 (840)
+... .....+.....+..+.+..+.. ......+....+|+.+.+..+ +......+|..+.+|+.+.+..+ ++..
T Consensus 181 --~~~~-~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I 254 (379)
T 4h09_A 181 --NKNK-TILESYPAAKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSI 254 (379)
T ss_dssp --ETTS-SEEEECCTTCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEE
T ss_pred --cccc-ceecccccccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEe
Confidence 0000 1122333444555555443322 233444445555555544333 33344455566666666666554 3334
Q ss_pred CCccccCCCcccEEeccCCcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCCccCCCCCCcccCc
Q 003199 277 IPEGILSLPHVSIIDLSYNSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDNLLSGPIPSGIGNL 356 (840)
Q Consensus 277 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 356 (840)
...+|....+|+.+.+..+ ++.....+|.++++|+.+.+.++.++.+...+|.++.+|+.++|..+ ++..-..+|.++
T Consensus 255 ~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C 332 (379)
T 4h09_A 255 GSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNC 332 (379)
T ss_dssp CTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTC
T ss_pred Cccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCC
Confidence 4445555556666655432 44444455555666666666555555455555555556666655433 433334455555
Q ss_pred cccchhcccCCccCCCcchhcccc
Q 003199 357 KKLNLLMLQSNKLNSSIPNSLSSL 380 (840)
Q Consensus 357 ~~L~~L~Ls~N~l~~~~~~~~~~l 380 (840)
.+|+.+.+..+ ++.+-..+|.++
T Consensus 333 ~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 333 KALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp TTCCCCCCCTT-CCEECTTTTTTS
T ss_pred CCCCEEEECCc-cCEEchhHhhCC
Confidence 55555555433 433334444443
No 406
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.21 E-value=1.2e-11 Score=133.08 Aligned_cols=102 Identities=17% Similarity=0.210 Sum_probs=49.3
Q ss_pred EEeeCc-eeeccCCccccCCCcccEEeccC-CcccccCCcccCCCCCCceeecccceeeeccchhhcccCcccEEEcCCC
Q 003199 266 FRVSNN-HLEGSIPEGILSLPHVSIIDLSY-NSFSGPIANTVGNARNLSELFMQRNQISGFIPSEIYRAISLVKIDLSDN 343 (840)
Q Consensus 266 L~l~~N-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 343 (840)
++++++ +|+ .+|. +..+++|+.|+|++ |+|++..+..|+.+++|+.|+|++|+|++..|..|..+++|+.|+|++|
T Consensus 13 v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 13 LRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp EECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 444554 454 3444 55555555555553 5555544445555555555555555555444444444555555555555
Q ss_pred ccCCCCCCcccCccccchhcccCCccC
Q 003199 344 LLSGPIPSGIGNLKKLNLLMLQSNKLN 370 (840)
Q Consensus 344 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 370 (840)
+|++..+..|..++ |+.|+|++|++.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 55433333333333 444444444443
No 407
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.19 E-value=3e-11 Score=130.08 Aligned_cols=102 Identities=20% Similarity=0.173 Sum_probs=82.8
Q ss_pred CEEecCCC-cCcccCCccccCCCCCCEEeCCC-CCCCccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEE
Q 003199 20 RRLDLSNN-LFTGQFPLSVFNLTNLEVLSFNE-NPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDL 97 (840)
Q Consensus 20 ~~L~Ls~n-~i~~~~p~~~~~l~~L~~L~L~~-N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 97 (840)
..++++++ +++ .+|. +..+++|++|+|++ | .+..+++..|.+|++|+.|+|++|.|++..|..|.+|++|++|
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n---~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L 85 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQ---HLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRL 85 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCS---SCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEE
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCC---CCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEE
Confidence 45789988 888 6787 99999999999986 8 6777888888888888888888888888888888888888888
Q ss_pred EccCCcccccCchhhhcCCCCCeeecccCc
Q 003199 98 ELTGNFITGHIPPEIGLLKNLRQLELYYNQ 127 (840)
Q Consensus 98 ~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~ 127 (840)
+|++|+|++..+..|..++ |+.|+|.+|.
T Consensus 86 ~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~ 114 (347)
T 2ifg_A 86 NLSFNALESLSWKTVQGLS-LQELVLSGNP 114 (347)
T ss_dssp ECCSSCCSCCCSTTTCSCC-CCEEECCSSC
T ss_pred eCCCCccceeCHHHcccCC-ceEEEeeCCC
Confidence 8888888865555665555 7788887776
No 408
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.12 E-value=1.8e-10 Score=118.52 Aligned_cols=146 Identities=14% Similarity=0.062 Sum_probs=112.0
Q ss_pred HHHHHhcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-CCCcceeeeE
Q 003199 522 REILEAMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-HKNIVKLYCY 600 (840)
Q Consensus 522 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~ 600 (840)
......|+....++.|+.+.||++... ++.+++|+....... ....+.+|+++++.+. +..+.+++++
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~----------~~~~~~~E~~~l~~l~~~~~vP~v~~~ 78 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG----------TTYDVEREKDMMLWLEGKLPVPKVLHF 78 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT----------STTCHHHHHHHHHHHTTTSCCCCEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC----------CHHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence 445567877778888999999999755 689999987432100 0124778999998884 6778899999
Q ss_pred EecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcC---------------------------
Q 003199 601 FSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGL--------------------------- 653 (840)
Q Consensus 601 ~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--------------------------- 653 (840)
+......++||||++|.++.+... +......++.++++++..||+..
T Consensus 79 ~~~~~~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (263)
T 3tm0_A 79 ERHDGWSNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLAD 152 (263)
T ss_dssp EEETTEEEEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSC
T ss_pred EecCCceEEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccc
Confidence 988888999999999999887632 12234578899999999999811
Q ss_pred -----------------------------CCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 654 -----------------------------LSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 654 -----------------------------~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++|+|++|.||+++++..+.|+||+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 153 VDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1348999999999999876556799999764
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.03 E-value=3.9e-10 Score=116.01 Aligned_cols=128 Identities=16% Similarity=0.111 Sum_probs=95.4
Q ss_pred eccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCC--cceeeeEEecCccceEEEe
Q 003199 535 GQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKN--IVKLYCYFSSLYCNLLVYE 612 (840)
Q Consensus 535 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lV~e 612 (840)
+.|..+.||++...+|+.+++|+..... ...+.+|+.+++.+.+.+ +.+++++....+..++|||
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~-------------~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA-------------LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT-------------TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc-------------chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 4566699999987778889999864321 123667888888886544 5568888887778899999
Q ss_pred ecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 003199 613 YMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGL--------------------------------------- 653 (840)
Q Consensus 613 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~--------------------------------------- 653 (840)
|++|.++. ... . ....++.++++.+..||+..
T Consensus 96 ~i~G~~l~--~~~----~---~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 96 EVPGQDLL--SSH----L---APAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp CCSSEETT--TSC----C---CHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred ecCCcccC--cCc----C---CHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 99998883 211 1 13367788888888888731
Q ss_pred ----------------CCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 654 ----------------LSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 654 ----------------~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++|+|++|.||++++++.+.|+|||.+.
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 0129999999999999877666799999874
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.94 E-value=4.4e-10 Score=120.23 Aligned_cols=183 Identities=15% Similarity=0.147 Sum_probs=93.4
Q ss_pred CCCCEEecCCCcCcc-c-------CCccccCCCCCCEEeCCCCCCCc--cCCC----CcccccccccccEEEecCccccc
Q 003199 17 QNLRRLDLSNNLFTG-Q-------FPLSVFNLTNLEVLSFNENPGFK--LWKL----PESSIFRLTKLRIMVLATCALHG 82 (840)
Q Consensus 17 ~~L~~L~Ls~n~i~~-~-------~p~~~~~l~~L~~L~L~~N~~~~--l~~l----~~~~~~~l~~L~~L~L~~n~l~~ 82 (840)
..++.|.+..+...+ . +..++..+++|+.|.+..+.... +.-+ -...+..+++|+.|.|++|.-.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l- 185 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL- 185 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-
Confidence 456777777665442 1 13345567888888887652110 1000 1133456678888888776311
Q ss_pred cCCccccCCCCCcEEEccCCcccccCchhhh--cCCCCCeeecccCcccc-cc-----CCccc--CCCCCCCeeeccCCc
Q 003199 83 QIPASIGNVTSLTDLELTGNFITGHIPPEIG--LLKNLRQLELYYNQQLA-GT-----IPEEL--GNLTELTDLDMSVNH 152 (840)
Q Consensus 83 ~~~~~~~~l~~L~~L~L~~n~i~~~~p~~~~--~l~~L~~L~L~~n~~~~-~~-----~p~~l--~~l~~L~~L~L~~n~ 152 (840)
.++. +. +++|++|+|..|.+.......+. .+++|+.|+|+.+.... +. +...+ ..+++|++|+|++|.
T Consensus 186 ~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~ 263 (362)
T 2ra8_A 186 SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAE 263 (362)
T ss_dssp BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCT
T ss_pred eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCC
Confidence 2232 33 67788888887777644334444 57788888775321000 00 00111 134556666665555
Q ss_pred ccccCCcccc---CCCCCcEEEeeccccccccc----hhhhcCCCCCEEEccCCcCc
Q 003199 153 LSGKIPESIL---RLPKLRVLQLYNNSLSGEIS----SVIANSTTLTMLSLYDNSLT 202 (840)
Q Consensus 153 l~~~~~~~~~---~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~l~ 202 (840)
+....+..+. .+++|++|+|+.|.|.+... ..+..+++|+.|+|++|.|+
T Consensus 264 i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 264 EQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp THHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 5432211121 34555555555555554221 12233455555555555554
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.90 E-value=4.2e-10 Score=120.40 Aligned_cols=179 Identities=15% Similarity=0.169 Sum_probs=124.3
Q ss_pred CCCCCCCCEEecCCCcCc---------ccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCcccccc
Q 003199 13 FSPMQNLRRLDLSNNLFT---------GQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQ 83 (840)
Q Consensus 13 ~~~l~~L~~L~Ls~n~i~---------~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~ 83 (840)
...+++|+.|.+.++... +.++..+..+++|+.|+|++|... .++. + .+++|+.|+|..|.+...
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l---~l~~--~-~~~~L~~L~L~~~~l~~~ 208 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL---SIGK--K-PRPNLKSLEIISGGLPDS 208 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC---BCCS--C-BCTTCSEEEEECSBCCHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc---eecc--c-cCCCCcEEEEecCCCChH
Confidence 445789999999765432 134556778899999999988322 3333 3 388999999999998754
Q ss_pred CCcccc--CCCCCcEEEccC--Ccccc-----cCchhh--hcCCCCCeeecccCccccccCCccc---CCCCCCCeeecc
Q 003199 84 IPASIG--NVTSLTDLELTG--NFITG-----HIPPEI--GLLKNLRQLELYYNQQLAGTIPEEL---GNLTELTDLDMS 149 (840)
Q Consensus 84 ~~~~~~--~l~~L~~L~L~~--n~i~~-----~~p~~~--~~l~~L~~L~L~~n~~~~~~~p~~l---~~l~~L~~L~L~ 149 (840)
....+. .+++|++|+|+. |...+ .+...+ ..+++|+.|+|++|.+ .+..+..+ ..+++|++|+|+
T Consensus 209 ~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i-~~~~~~~la~a~~~~~L~~LdLs 287 (362)
T 2ra8_A 209 VVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEE-QNVVVEMFLESDILPQLETMDIS 287 (362)
T ss_dssp HHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTT-HHHHHHHHHHCSSGGGCSEEECC
T ss_pred HHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCC-chHHHHHHHhCccCCCCCEEECC
Confidence 434443 789999999863 22211 111223 2579999999998873 32222222 357899999999
Q ss_pred CCcccccC----CccccCCCCCcEEEeeccccccccchhhhc-CCCCCEEEccCCc
Q 003199 150 VNHLSGKI----PESILRLPKLRVLQLYNNSLSGEISSVIAN-STTLTMLSLYDNS 200 (840)
Q Consensus 150 ~n~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~~N~ 200 (840)
.|.+++.. +..+..+++|+.|+|++|.|++.....+.. + ...++++.++
T Consensus 288 ~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 288 AGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp SSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 99998642 334456799999999999998665555554 3 5678888887
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.87 E-value=4.9e-09 Score=113.18 Aligned_cols=144 Identities=17% Similarity=0.280 Sum_probs=105.1
Q ss_pred cCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC--CCCcceeeeEEecC---c
Q 003199 531 KNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR--HKNIVKLYCYFSSL---Y 605 (840)
Q Consensus 531 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~ 605 (840)
.+.++.|.++.||++... +..+++|+...+.... ......+.+|+.+++.+. +..+.+++.++.+. +
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~-------~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g 114 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKL-------LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIG 114 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC-----------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTS
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCC-------CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccC
Confidence 457899999999999876 4678888764101000 011345778999999886 45688899888776 4
Q ss_pred cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcC--------------------------------
Q 003199 606 CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGL-------------------------------- 653 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~-------------------------------- 653 (840)
..++||||++|..+.+... ..++..++..++.+++++|..||+..
T Consensus 115 ~~~~vme~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 115 RAFYIMEFVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp SCEEEEECCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred CeEEEEEecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 4799999999877754221 24677888899999999999999721
Q ss_pred -----------------------CCCeEecCCCCCCEEEcCCCC--Ceeecccchhh
Q 003199 654 -----------------------LSPIIHRDIKSTNILLDVNYQ--PKVADFGIAKV 685 (840)
Q Consensus 654 -----------------------~~~ivH~Dlk~~Nill~~~~~--~kl~Dfg~a~~ 685 (840)
...++|+|+++.||+++.++. +.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246899999999999997753 58999998754
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.74 E-value=8.4e-09 Score=108.46 Aligned_cols=187 Identities=21% Similarity=0.168 Sum_probs=120.2
Q ss_pred cCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-CCC--cceeeeEEecCc--
Q 003199 531 KNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-HKN--IVKLYCYFSSLY-- 605 (840)
Q Consensus 531 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~-- 605 (840)
.+.++.|....||++. +.+++|+.... .....+.+|+++++.+. +.. +.+++.......
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~------------~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~ 88 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS------------RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETY 88 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH------------HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc------------chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCC
Confidence 4568999999999863 56888875211 22456888999998873 332 445555543333
Q ss_pred -cceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcC-------------------------------
Q 003199 606 -CNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGL------------------------------- 653 (840)
Q Consensus 606 -~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------------------------------- 653 (840)
..|+||||++|.++.+.... .++..++..++.+++..++.||+..
T Consensus 89 ~~~~~vm~~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (304)
T 3sg8_A 89 QMSFAGFTKIKGVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSREL 165 (304)
T ss_dssp SCSCEEEECCCCEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTS
T ss_pred CcceEEEcccCCeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccC
Confidence 34899999999888654332 4567778888888888888888611
Q ss_pred ------------------------CCCeEecCCCCCCEEEcC--CCCCeeecccchhhhhccCCCCccee----------
Q 003199 654 ------------------------LSPIIHRDIKSTNILLDV--NYQPKVADFGIAKVLQARGGKDSTTT---------- 697 (840)
Q Consensus 654 ------------------------~~~ivH~Dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~---------- 697 (840)
...++|+|++|.||++++ ...+.|+||+.+..-.. ..+-...
T Consensus 166 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~--~~Dl~~~~~~~~~~~~~ 243 (304)
T 3sg8_A 166 KGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDP--DNDFISLMEDDEEYGME 243 (304)
T ss_dssp CHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECT--THHHHTTCCTTTSCCHH
T ss_pred CcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCCh--HHHHHHHHhhccccCHH
Confidence 134799999999999998 45678999998754211 0000000
Q ss_pred ---cccccccccC-ccccccCCCCccccchhHHHHHHHHHhCCCCCC
Q 003199 698 ---VIAGTYGYLA-PEYAYSSKATTKCDVYSFGVVLMELITGRKPVE 740 (840)
Q Consensus 698 ---~~~gt~~y~a-PE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~ 740 (840)
......++.. |+... +.....+.|++|.++|++.+|..+|.
T Consensus 244 ~~~~~l~~Y~~~~~~~~~~--r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 244 FVSKILNHYKHKDIPTVLE--KYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHHHHHHHTCSCHHHHHH--HHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHcCCCCcHHHHH--HHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 0000001111 22111 11223689999999999999987763
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.50 E-value=4e-07 Score=96.22 Aligned_cols=136 Identities=18% Similarity=0.197 Sum_probs=99.0
Q ss_pred hcCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCC----CCcceeeeEEe
Q 003199 527 AMTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRH----KNIVKLYCYFS 602 (840)
Q Consensus 527 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~ 602 (840)
.+...+.++.|....||++ |+.+++|+.... .....+.+|.++++.+.+ ..+.+++++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~------------~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~-- 99 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD------------SVRISQKRELELYRFLENCKLSYQIPAVVYQ-- 99 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH------------HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE--
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH------------HHHHHHHHHHHHHHHHHhcCCCCCcceEEec--
Confidence 3445678999999999998 667888876211 123457889998888865 224455554
Q ss_pred cCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCC----------------------------
Q 003199 603 SLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLL---------------------------- 654 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~---------------------------- 654 (840)
+..++||||++|.++...... .++..++..++.+++..++.||+...
T Consensus 100 --~~~~lvme~i~G~~l~~~~~~---~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (320)
T 3r70_A 100 --SDRFNIMKYIKGERITYEQYH---KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISI 174 (320)
T ss_dssp --CSSCEEEECCCCBCCCHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHH
T ss_pred --CCcEEEEeecCCccccccccc---cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHH
Confidence 466899999999888643322 35666777788888888888885321
Q ss_pred --------------------------------CCeEecCCCCCCEEEcCCCCCeeecccchhh
Q 003199 655 --------------------------------SPIIHRDIKSTNILLDVNYQPKVADFGIAKV 685 (840)
Q Consensus 655 --------------------------------~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 685 (840)
..++|+|++|.||+++.+..+.|+||+.+..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 175 LEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2349999999999999866679999998754
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.43 E-value=2.7e-08 Score=100.58 Aligned_cols=65 Identities=29% Similarity=0.351 Sum_probs=28.5
Q ss_pred cCcccEEEcCCCccCC--CCCCcccCccccchhcccCCccCCCcchhccccc--CCCEEECcCccccccCC
Q 003199 332 AISLVKIDLSDNLLSG--PIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLK--SLNVLDLSNNLLTGYIP 398 (840)
Q Consensus 332 l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~--~L~~L~l~~N~l~~~~p 398 (840)
+++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|++++.+|
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 3444444444444443 2233334444444455555544432 1122222 45555555555554444
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.42 E-value=2.7e-08 Score=95.87 Aligned_cols=112 Identities=15% Similarity=0.195 Sum_probs=64.3
Q ss_pred CCCcccEEeccCC-ccccc----CCcccCCCCCCceeecccceeeec----cchhhcccCcccEEEcCCCccCCC----C
Q 003199 283 SLPHVSIIDLSYN-SFSGP----IANTVGNARNLSELFMQRNQISGF----IPSEIYRAISLVKIDLSDNLLSGP----I 349 (840)
Q Consensus 283 ~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~ 349 (840)
..+.|++|+|++| .+... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|.+. +
T Consensus 34 ~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l 113 (185)
T 1io0_A 34 NDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILAL 113 (185)
T ss_dssp TCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHH
T ss_pred cCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHH
Confidence 3444555555555 44321 222334445566666666666532 233344445677777777776642 3
Q ss_pred CCcccCccccchhcc--cCCccCCC----cchhcccccCCCEEECcCcccc
Q 003199 350 PSGIGNLKKLNLLML--QSNKLNSS----IPNSLSSLKSLNVLDLSNNLLT 394 (840)
Q Consensus 350 p~~~~~l~~L~~L~L--s~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~ 394 (840)
...+...+.|+.|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 114 ~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 114 VEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 344555667777777 67777643 2344555678888888888875
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=1.7e-07 Score=90.28 Aligned_cols=118 Identities=14% Similarity=0.118 Sum_probs=56.4
Q ss_pred CCCCCCCEEecCCC-cCccc----CCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCccc
Q 003199 14 SPMQNLRRLDLSNN-LFTGQ----FPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPASI 88 (840)
Q Consensus 14 ~~l~~L~~L~Ls~n-~i~~~----~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 88 (840)
...+.|++|+|++| .|... +...+...++|++|+|++|. +.+-... .+...+
T Consensus 33 ~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~---i~~~g~~--------------------~l~~~L 89 (185)
T 1io0_A 33 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTR---SNDPVAF--------------------ALAEML 89 (185)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSC---CCHHHHH--------------------HHHHHH
T ss_pred hcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCC---CChHHHH--------------------HHHHHH
Confidence 44566666666666 66532 23344445566666666662 2111100 112233
Q ss_pred cCCCCCcEEEccCCccccc----CchhhhcCCCCCeeec--ccCccccc---cCCcccCCCCCCCeeeccCCccc
Q 003199 89 GNVTSLTDLELTGNFITGH----IPPEIGLLKNLRQLEL--YYNQQLAG---TIPEELGNLTELTDLDMSVNHLS 154 (840)
Q Consensus 89 ~~l~~L~~L~L~~n~i~~~----~p~~~~~l~~L~~L~L--~~n~~~~~---~~p~~l~~l~~L~~L~L~~n~l~ 154 (840)
...++|++|+|++|.|++. +...+...++|++|+| ++|.+-.. .+...+...++|++|+|++|.+.
T Consensus 90 ~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 90 KVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3344555555555555532 2334444555666666 44541110 01223444556666666666664
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.30 E-value=1.3e-07 Score=95.56 Aligned_cols=107 Identities=19% Similarity=0.265 Sum_probs=57.9
Q ss_pred CCCCCCCCE--EecCCCcCc---ccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecCccccccCCcc
Q 003199 13 FSPMQNLRR--LDLSNNLFT---GQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLATCALHGQIPAS 87 (840)
Q Consensus 13 ~~~l~~L~~--L~Ls~n~i~---~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 87 (840)
|...+.|+. ++++.|... ..++....++++|+.|+|++|.+..+..++ ..+..+++|+.|+|++|.|.+. ..
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~-~~~~~l~~L~~L~Ls~N~i~~~--~~ 213 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMS-SIVQKAPNLKILNLSGNELKSE--RE 213 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGT-THHHHSTTCCEEECTTSCCCSG--GG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccch-hHHhhCCCCCEEECCCCccCCc--hh
Confidence 333344444 556666433 222222345677777777777443333322 3355667777777777777643 22
Q ss_pred ccCCC--CCcEEEccCCcccccCc-------hhhhcCCCCCeee
Q 003199 88 IGNVT--SLTDLELTGNFITGHIP-------PEIGLLKNLRQLE 122 (840)
Q Consensus 88 ~~~l~--~L~~L~L~~n~i~~~~p-------~~~~~l~~L~~L~ 122 (840)
+..+. +|++|+|++|.+.+..| ..+..+++|+.||
T Consensus 214 l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 214 LDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 33333 67777777777765443 2355666666664
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.26 E-value=3.9e-06 Score=86.31 Aligned_cols=134 Identities=17% Similarity=0.166 Sum_probs=96.6
Q ss_pred eeeccCCc-EEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-CCCcceeeeEEecCccceE
Q 003199 533 KVGQGGSG-TVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-HKNIVKLYCYFSSLYCNLL 609 (840)
Q Consensus 533 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l 609 (840)
.+..|..| .||+.... ++..+++|+-.. .....+.+|...++.+. +-.+.++++++.+.+..++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-------------~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~l 97 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG-------------SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWL 97 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET-------------HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC-------------CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEE
Confidence 45667666 69997654 567889997521 12356778999888874 4447788999988889999
Q ss_pred EEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcC------------------------------------
Q 003199 610 VYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGL------------------------------------ 653 (840)
Q Consensus 610 V~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------------------------------------ 653 (840)
|||++++.++.+..... ......++.+++..+..||+..
T Consensus 98 vme~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 98 LTTAIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp EEECCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred EEEeeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 99999998887655432 2234456667777777777421
Q ss_pred -------------------CCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 654 -------------------LSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 654 -------------------~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++|+|+.+.|||+++++.+-|+||+.+.
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 0137899999999999987767799999874
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.25 E-value=5.5e-06 Score=86.73 Aligned_cols=135 Identities=18% Similarity=0.109 Sum_probs=92.5
Q ss_pred cCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCC---CcceeeeEEe-cCcc
Q 003199 531 KNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHK---NIVKLYCYFS-SLYC 606 (840)
Q Consensus 531 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~ 606 (840)
.+.++.|....||+. |+.++||+... ......+.+|+++++.+.+. .+.+++.++. ..+.
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~------------~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~ 87 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS------------QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGN 87 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS------------HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC------------chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCc
Confidence 346888999999998 56788887411 12345788999999999642 3566677664 4455
Q ss_pred ceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhc----------------------------------
Q 003199 607 NLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHG---------------------------------- 652 (840)
Q Consensus 607 ~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~---------------------------------- 652 (840)
.++||||++|..+.+.... .++..+...++.++++.|..||+.
T Consensus 88 ~~~v~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l 164 (306)
T 3tdw_A 88 PFVGYRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLL 164 (306)
T ss_dssp EEEEEECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGS
T ss_pred eEEEEeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhccccc
Confidence 7899999999887653221 234444555555555555555542
Q ss_pred -----------------------CCCCeEecCCCCCCEEEcC---CCCC-eeecccchh
Q 003199 653 -----------------------LLSPIIHRDIKSTNILLDV---NYQP-KVADFGIAK 684 (840)
Q Consensus 653 -----------------------~~~~ivH~Dlk~~Nill~~---~~~~-kl~Dfg~a~ 684 (840)
....++|+|+++.||+++. ++.+ .|+||+.+.
T Consensus 165 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 165 DESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAA 223 (306)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCE
T ss_pred chhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcC
Confidence 1235699999999999987 4554 799999774
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.18 E-value=6.7e-06 Score=85.00 Aligned_cols=76 Identities=17% Similarity=0.209 Sum_probs=58.7
Q ss_pred ccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCC---CcceeeeEEecCcc
Q 003199 530 EKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHK---NIVKLYCYFSSLYC 606 (840)
Q Consensus 530 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~ 606 (840)
..+.|+.|.++.||++...+|+.++||+...... .....+..|++.++.+.+. .+.+++++. .
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~----------~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~ 84 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAP----------ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----D 84 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC----------CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----T
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCc----------chhHHHHHHHHHHHHHHhcCCCCcCeEEEec----C
Confidence 3567999999999999888899999998632211 1124578899999999765 577787764 4
Q ss_pred ceEEEeecCCCCh
Q 003199 607 NLLVYEYMPNGNL 619 (840)
Q Consensus 607 ~~lV~e~~~~gsL 619 (840)
.++||||++++.+
T Consensus 85 ~~lvme~l~g~~~ 97 (288)
T 3d1u_A 85 RTLAMEWVDERPP 97 (288)
T ss_dssp TEEEEECCCCCCC
T ss_pred cEEEEEecccCCC
Confidence 6899999999875
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.08 E-value=9.5e-06 Score=86.95 Aligned_cols=75 Identities=8% Similarity=0.055 Sum_probs=54.8
Q ss_pred ccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCC--cceeeeEEecC-cc
Q 003199 530 EKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKN--IVKLYCYFSSL-YC 606 (840)
Q Consensus 530 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~ 606 (840)
..+.++.|....+|+... +|+.+++|+.... ..+..|+.+++.+.... +.++++++... ..
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~---------------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~ 108 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA---------------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESL 108 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC---------------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSC
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch---------------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCC
Confidence 345789999999999875 4788999976211 14677888888886433 56677776654 56
Q ss_pred ceEEEeecCCCChH
Q 003199 607 NLLVYEYMPNGNLW 620 (840)
Q Consensus 607 ~~lV~e~~~~gsL~ 620 (840)
.++||||++|..+.
T Consensus 109 ~~lv~e~l~G~~l~ 122 (362)
T 3ovc_A 109 TYCISRRAQGVTLQ 122 (362)
T ss_dssp EEEEEECCCSEETT
T ss_pred eEEEEEecCCCCcc
Confidence 79999999976553
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.96 E-value=1.3e-05 Score=86.12 Aligned_cols=82 Identities=7% Similarity=-0.012 Sum_probs=53.0
Q ss_pred Cee-eccCCcEEEEEEeC-------CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-C--CCcceeeeE
Q 003199 532 NKV-GQGGSGTVYKIDLN-------SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-H--KNIVKLYCY 600 (840)
Q Consensus 532 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h--~niv~l~~~ 600 (840)
+.| +.|....+|+.... +++.+++|+........... ...+.+|+.+++.+. + -.+.+++.+
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~-------~~~~~~E~~~l~~L~~~~~vpvP~v~~~ 98 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFP-------TYRLDHQFEVIRLVGELTDVPVPRVRWI 98 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSS-------CCCHHHHHHHHHHHHHHCCSCCCCEEEE
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCc-------hhHHHHHHHHHHHHhhcCCCCCCcEEEE
Confidence 457 88889999998654 26678888753221000000 123567888888774 3 356778888
Q ss_pred EecC---ccceEEEeecCCCChH
Q 003199 601 FSSL---YCNLLVYEYMPNGNLW 620 (840)
Q Consensus 601 ~~~~---~~~~lV~e~~~~gsL~ 620 (840)
+.+. ...++||||++|..+.
T Consensus 99 ~~~~~~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 99 ETTGDVLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp ECSSTTTSSCEEEEECCCCBCCC
T ss_pred ccCCCccCCceEEEEecCCCChh
Confidence 7655 3568999999886654
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.96 E-value=2.1e-06 Score=80.28 Aligned_cols=84 Identities=13% Similarity=0.144 Sum_probs=41.8
Q ss_pred CCCcEEEccCCcccccCchhhhcCCCCCeeecccCccccccCCcccCCC----CCCCeeeccCCc-ccccCCccccCCCC
Q 003199 92 TSLTDLELTGNFITGHIPPEIGLLKNLRQLELYYNQQLAGTIPEELGNL----TELTDLDMSVNH-LSGKIPESILRLPK 166 (840)
Q Consensus 92 ~~L~~L~L~~n~i~~~~p~~~~~l~~L~~L~L~~n~~~~~~~p~~l~~l----~~L~~L~L~~n~-l~~~~~~~~~~l~~ 166 (840)
.+|++|||++|.|++..-..+..+++|+.|+|++|..+++.--..+..+ ++|++|+|++|. |+...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 3566777777666654444455566666666666543333222223332 245555555543 44332233444555
Q ss_pred CcEEEeecc
Q 003199 167 LRVLQLYNN 175 (840)
Q Consensus 167 L~~L~L~~N 175 (840)
|++|+|+++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555555554
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.95 E-value=2.3e-06 Score=80.03 Aligned_cols=91 Identities=11% Similarity=0.087 Sum_probs=60.3
Q ss_pred CcccCCCCCCCeeeccCCcccccCCccccCCCCCcEEEeeccc-cccccchhhhcC----CCCCEEEccCCc-CcccCCc
Q 003199 134 PEELGNLTELTDLDMSVNHLSGKIPESILRLPKLRVLQLYNNS-LSGEISSVIANS----TTLTMLSLYDNS-LTGEVPQ 207 (840)
Q Consensus 134 p~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~L~~N~-l~~~~~~ 207 (840)
|.....-.+|++|||++|.|+...-..+.++++|++|+|++|. |++.....++.+ ++|++|+|++|. |+...-.
T Consensus 54 P~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~ 133 (176)
T 3e4g_A 54 PTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGII 133 (176)
T ss_dssp CCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHH
T ss_pred CcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHH
Confidence 4333233467778888777776555566777888888888874 666555555554 368888888764 6654444
Q ss_pred CCCCCCCcceecccccc
Q 003199 208 DLGQWSPLVVLDLSENK 224 (840)
Q Consensus 208 ~l~~l~~L~~L~L~~N~ 224 (840)
.+..+++|+.|+|+++.
T Consensus 134 ~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 134 ALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp HGGGCTTCCEEEEESCT
T ss_pred HHhcCCCCCEEECCCCC
Confidence 56667778888877764
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.81 E-value=3.2e-05 Score=82.46 Aligned_cols=31 Identities=29% Similarity=0.281 Sum_probs=27.6
Q ss_pred CCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 654 LSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 654 ~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
...++|+|+++.||+++.++.+.|+||+.+.
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 3689999999999999888889999999763
No 427
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.65 E-value=0.00011 Score=79.98 Aligned_cols=82 Identities=12% Similarity=0.085 Sum_probs=47.9
Q ss_pred cCeeeccCCcEEEEEEeC-CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCC--C-CcceeeeEEecCcc
Q 003199 531 KNKVGQGGSGTVYKIDLN-SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRH--K-NIVKLYCYFSSLYC 606 (840)
Q Consensus 531 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~ 606 (840)
.+.+|.|..+.||++... +++.|+||........... ........+..|.++++.+.. + .+.+++.+ +.+.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~---~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~ 109 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGE---SWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEM 109 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC----------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTT
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCC---CCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCc
Confidence 457999999999999654 4688999986432110000 000112345668888877642 3 34455544 3445
Q ss_pred ceEEEeecCCC
Q 003199 607 NLLVYEYMPNG 617 (840)
Q Consensus 607 ~~lV~e~~~~g 617 (840)
.++||||+++.
T Consensus 110 ~~lvmE~l~g~ 120 (397)
T 2olc_A 110 AVTVMEDLSHL 120 (397)
T ss_dssp TEEEECCCTTS
T ss_pred cEEEEEeCCCc
Confidence 68999999764
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.61 E-value=0.00026 Score=73.62 Aligned_cols=136 Identities=17% Similarity=0.119 Sum_probs=89.7
Q ss_pred cCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC---CCCcceeeeEEecCccc
Q 003199 531 KNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR---HKNIVKLYCYFSSLYCN 607 (840)
Q Consensus 531 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~ 607 (840)
.+.|+.|....+|+.... +..++||+.... ....+..|++.++.+. ...+.++++++...+..
T Consensus 41 ~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~-------------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~ 106 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLINDE-VQTVFVKINERS-------------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHS 106 (312)
T ss_dssp EEEECCSSSSEEEEEESS-SCEEEEEEEEGG-------------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEE
T ss_pred eEEeCCccceeeeEEEEC-CCeEEEEeCCcc-------------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCce
Confidence 457899999999998764 678889976321 1356788988888884 35688889888877888
Q ss_pred eEEEeecCCCChHH-----------HhhcCCC---------------------CCChHHHH---HHH-------------
Q 003199 608 LLVYEYMPNGNLWD-----------ALHKGLV---------------------HLDWPTRH---KIA------------- 639 (840)
Q Consensus 608 ~lV~e~~~~gsL~~-----------~l~~~~~---------------------~~~~~~~~---~i~------------- 639 (840)
++||||+++..+.. .++.... .-+|.+.. ++.
T Consensus 107 ~lvme~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~ 186 (312)
T 3jr1_A 107 FLLLEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIF 186 (312)
T ss_dssp EEEEECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCC
T ss_pred EEEEEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCCh
Confidence 99999999876421 2222110 12454322 011
Q ss_pred ---HHHH-HHHHHHhh-cCCCCeEecCCCCCCEEEcCCCCCeeeccc
Q 003199 640 ---FGVA-QGLAYLHH-GLLSPIIHRDIKSTNILLDVNYQPKVADFG 681 (840)
Q Consensus 640 ---~~i~-~~l~~LH~-~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg 681 (840)
..++ .....|.. .....+||+|+.+.|++++.++ +.|.||+
T Consensus 187 ~~~~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 187 GNIDLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp SCHHHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 0111 11223321 1235789999999999999887 8888974
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.27 E-value=4.3e-05 Score=72.81 Aligned_cols=63 Identities=19% Similarity=0.223 Sum_probs=29.8
Q ss_pred ccCCCCCcEEEeeccccccc----cchhhhcCCCCCEEEccCCcCccc----CCcCCCCCCCcceeccccc
Q 003199 161 ILRLPKLRVLQLYNNSLSGE----ISSVIANSTTLTMLSLYDNSLTGE----VPQDLGQWSPLVVLDLSEN 223 (840)
Q Consensus 161 ~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~~~l~~l~~L~~L~L~~N 223 (840)
+..-..|+.|+|++|+|.+. +..++...+.|++|+|++|+|... +...+..-+.|++|+|++|
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCC
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCC
Confidence 33344555555555555432 223333445555555555555522 1223444445666666543
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.22 E-value=0.00077 Score=69.59 Aligned_cols=78 Identities=17% Similarity=0.212 Sum_probs=54.7
Q ss_pred cCccCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCC---CCcceeeeEEecC
Q 003199 528 MTEKNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRH---KNIVKLYCYFSSL 604 (840)
Q Consensus 528 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~ 604 (840)
....+.+|.|..+.||+.+..||+.|+||+....... ....|..|+..|+.+.. -.+.+++++.
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~----------~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~--- 83 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPA----------LDGLFRAEALGLDWLGRSFGSPVPQVAGWD--- 83 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCC----------CTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcc----------hhhHHHHHHHHHHHHHhhCCCCcceEEecc---
Confidence 3446679999999999999999999999986433211 12346788888888742 2345555542
Q ss_pred ccceEEEeecCCCCh
Q 003199 605 YCNLLVYEYMPNGNL 619 (840)
Q Consensus 605 ~~~~lV~e~~~~gsL 619 (840)
..++||||++++..
T Consensus 84 -~~~lv~e~l~~~~~ 97 (288)
T 3f7w_A 84 -DRTLAMEWVDERPP 97 (288)
T ss_dssp -TTEEEEECCCCCCC
T ss_pred -CceEEEEeecccCC
Confidence 34799999987653
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.21 E-value=0.0024 Score=69.85 Aligned_cols=79 Identities=14% Similarity=0.105 Sum_probs=47.4
Q ss_pred CCeEecCCCCCCEEEcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccC---CCCccccchhHHHHHHH
Q 003199 655 SPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSS---KATTKCDVYSFGVVLME 731 (840)
Q Consensus 655 ~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~slG~il~e 731 (840)
..++|+|++|.|||++.++ ++++||+.+..-.. ..+.......-...|.+|+..... ......++.+....+|+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p--~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPM--GFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECH--HHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCch--HHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 7899999999999999876 99999998754211 000000000011346666544311 12234555677888888
Q ss_pred HHhCC
Q 003199 732 LITGR 736 (840)
Q Consensus 732 l~tg~ 736 (840)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.19 E-value=0.00015 Score=69.14 Aligned_cols=62 Identities=18% Similarity=0.239 Sum_probs=26.4
Q ss_pred CCCCcEEEeecccccccc----chhhhcCCCCCEEEccCC---cCcc----cCCcCCCCCCCcceeccccccc
Q 003199 164 LPKLRVLQLYNNSLSGEI----SSVIANSTTLTMLSLYDN---SLTG----EVPQDLGQWSPLVVLDLSENKL 225 (840)
Q Consensus 164 l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N---~l~~----~~~~~l~~l~~L~~L~L~~N~l 225 (840)
-+.|++|+|++|.|.+.. ..++...+.|++|+|++| .+.. .+...+..-++|+.|+++.|.+
T Consensus 97 N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 97 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred CCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 344555555555544221 223333444555555543 2221 1122333344555555555543
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.07 E-value=0.00061 Score=60.61 Aligned_cols=58 Identities=22% Similarity=0.296 Sum_probs=46.1
Q ss_pred cEEEcCCCccC-CCCCCcccCccccchhcccCCccCCCcchhcccccCCCEEECcCccccc
Q 003199 336 VKIDLSDNLLS-GPIPSGIGNLKKLNLLMLQSNKLNSSIPNSLSSLKSLNVLDLSNNLLTG 395 (840)
Q Consensus 336 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 395 (840)
..++.+++.|+ ..+|..+. ++|+.|+|++|+|+...+..|..+++|+.|+|++|++..
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 36788888886 34565443 468899999999987778888999999999999999875
No 434
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.07 E-value=0.0011 Score=72.51 Aligned_cols=73 Identities=22% Similarity=0.344 Sum_probs=48.3
Q ss_pred cCeeeccCCcEEEEEEeCC--------CcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCc-ceeeeEE
Q 003199 531 KNKVGQGGSGTVYKIDLNS--------GEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNI-VKLYCYF 601 (840)
Q Consensus 531 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~ 601 (840)
.+.|+.|....||++...+ ++.+++|+...... ...+..|..+++.+...++ .++++.+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~------------~~~li~E~~~l~~L~~~g~~P~l~~~~ 145 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET------------ESHLVAESVIFTLLSERHLGPKLYGIF 145 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC------------HHHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc------------HHHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 3468889899999997653 57899998732110 1234468888887753333 5667665
Q ss_pred ecCccceEEEeecCCCCh
Q 003199 602 SSLYCNLLVYEYMPNGNL 619 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL 619 (840)
.+ .+|+||++|.++
T Consensus 146 ~~----g~v~e~l~G~~l 159 (429)
T 1nw1_A 146 SG----GRLEEYIPSRPL 159 (429)
T ss_dssp TT----EEEECCCCEEEC
T ss_pred CC----CEEEEEeCCccc
Confidence 43 389999986443
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.04 E-value=0.001 Score=69.20 Aligned_cols=71 Identities=7% Similarity=0.019 Sum_probs=43.0
Q ss_pred cCeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCc-ceeeeEEecCccceE
Q 003199 531 KNKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNI-VKLYCYFSSLYCNLL 609 (840)
Q Consensus 531 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~l 609 (840)
.+.|+.|....+|++ +.+++|+........ -...+|+.+++.+....+ .+++++. .+..++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-----------~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~ 84 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-----------INRANEAVAAREAAKAGVSPEVLHVD--PATGVM 84 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----C-----------CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccce-----------eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEE
Confidence 567999999999998 558888774321110 112357777766643333 4555543 334579
Q ss_pred EEeec-CCCCh
Q 003199 610 VYEYM-PNGNL 619 (840)
Q Consensus 610 V~e~~-~~gsL 619 (840)
|+||+ ++.++
T Consensus 85 v~e~i~~g~~l 95 (301)
T 3dxq_A 85 VTRYIAGAQTM 95 (301)
T ss_dssp EEECCTTCEEC
T ss_pred EEeecCCCccC
Confidence 99999 55444
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.90 E-value=0.0013 Score=69.58 Aligned_cols=31 Identities=32% Similarity=0.402 Sum_probs=26.6
Q ss_pred CCeEecCCCCCCEEEcCC----CCCeeecccchhh
Q 003199 655 SPIIHRDIKSTNILLDVN----YQPKVADFGIAKV 685 (840)
Q Consensus 655 ~~ivH~Dlk~~Nill~~~----~~~kl~Dfg~a~~ 685 (840)
..++|||+.+.|||++.+ +.+.|+||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 579999999999999874 6789999998753
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.87 E-value=0.0018 Score=69.26 Aligned_cols=138 Identities=20% Similarity=0.167 Sum_probs=80.7
Q ss_pred CeeeccCCcEEEEEEeC--------CCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccC-CCCcceeeeEEe
Q 003199 532 NKVGQGGSGTVYKIDLN--------SGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIR-HKNIVKLYCYFS 602 (840)
Q Consensus 532 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 602 (840)
+.+..|-...+|++... +++.+++|+.-. . ......+.+|..+++.+. +.-..++++++.
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~-~----------~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~ 124 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA-I----------LQGVDSLVLESVMFAILAERSLGPQLYGVFP 124 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC--------------CCHHHHHHHHHHHHHHHHTTSSCCEEEEET
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC-c----------cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC
Confidence 46777888999998764 257899998521 1 011344568888888874 332356676665
Q ss_pred cCccceEEEeecCCCChHH-----------------HhhcCC----CCCC--hHHHHHHHHHHHH---------------
Q 003199 603 SLYCNLLVYEYMPNGNLWD-----------------ALHKGL----VHLD--WPTRHKIAFGVAQ--------------- 644 (840)
Q Consensus 603 ~~~~~~lV~e~~~~gsL~~-----------------~l~~~~----~~~~--~~~~~~i~~~i~~--------------- 644 (840)
+ .+||||++|..+.. .+|... .... |.++.++..++..
T Consensus 125 ~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~ 200 (379)
T 3feg_A 125 E----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMY 200 (379)
T ss_dssp T----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHT
T ss_pred C----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhH
Confidence 4 39999998755431 112211 1122 4455555443321
Q ss_pred ----HHHHHh----h-cCCCCeEecCCCCCCEEEcCC----CCCeeecccchh
Q 003199 645 ----GLAYLH----H-GLLSPIIHRDIKSTNILLDVN----YQPKVADFGIAK 684 (840)
Q Consensus 645 ----~l~~LH----~-~~~~~ivH~Dlk~~Nill~~~----~~~kl~Dfg~a~ 684 (840)
.++.|. . .....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 201 ~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 201 SLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp THHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 223332 2 122468999999999999876 688999999874
No 438
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.64 E-value=0.002 Score=67.66 Aligned_cols=140 Identities=12% Similarity=0.093 Sum_probs=76.3
Q ss_pred CeeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCC--cceeeeE------Eec
Q 003199 532 NKVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKN--IVKLYCY------FSS 603 (840)
Q Consensus 532 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~------~~~ 603 (840)
+.|+.|....+|++...+| .+++|+...... ...+..|+.++..+.... +.+++.. ...
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~------------~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~ 94 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRVE------------KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGEL 94 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC---------------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCCC------------HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEE
Confidence 4567788899999987655 678898743110 123445666666664222 2333321 112
Q ss_pred CccceEEEeecCCCChHH--------------HhhcCCCC-----------CChHHHHH------------HHHHHHHHH
Q 003199 604 LYCNLLVYEYMPNGNLWD--------------ALHKGLVH-----------LDWPTRHK------------IAFGVAQGL 646 (840)
Q Consensus 604 ~~~~~lV~e~~~~gsL~~--------------~l~~~~~~-----------~~~~~~~~------------i~~~i~~~l 646 (840)
.+..++|++|++|..+.. .++..... ..|..... +...+...+
T Consensus 95 ~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~ 174 (322)
T 2ppq_A 95 SGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEI 174 (322)
T ss_dssp TTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHH
T ss_pred CCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHH
Confidence 345689999998754311 12211000 01322110 011234455
Q ss_pred HHHhhc----CCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 647 AYLHHG----LLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 647 ~~LH~~----~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
++++.. ...+++|+|+.+.||+++.+..+.|+||+.+.
T Consensus 175 ~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 175 DYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp HHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred HHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 555532 23578999999999999987656799998764
No 439
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.58 E-value=0.008 Score=63.15 Aligned_cols=138 Identities=13% Similarity=0.132 Sum_probs=77.3
Q ss_pred eeeccCCcEEEEEEeCCCcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCC--CcceeeeE-----EecCc
Q 003199 533 KVGQGGSGTVYKIDLNSGEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHK--NIVKLYCY-----FSSLY 605 (840)
Q Consensus 533 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~-----~~~~~ 605 (840)
.++ |....||++...+|+.+++|....... ....+..|..+++.+... .+++++.. ....+
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-----------~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g 100 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-----------TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQG 100 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-----------CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETT
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC-----------CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECC
Confidence 466 888899998777787899998742211 123455677777766422 23444443 11234
Q ss_pred cceEEEeecCCCChH-----H---------HhhcC--------CCCCChHHH----HHH---------------HHHHHH
Q 003199 606 CNLLVYEYMPNGNLW-----D---------ALHKG--------LVHLDWPTR----HKI---------------AFGVAQ 644 (840)
Q Consensus 606 ~~~lV~e~~~~gsL~-----~---------~l~~~--------~~~~~~~~~----~~i---------------~~~i~~ 644 (840)
..++||||++|..+. . .++.. ....++... ..+ ...+..
T Consensus 101 ~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 180 (328)
T 1zyl_A 101 FYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDE 180 (328)
T ss_dssp EEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHH
T ss_pred EEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHH
Confidence 457899999875432 0 11110 011222111 001 111112
Q ss_pred HHHHHhhc----CCCCeEecCCCCCCEEEcCCCCCeeecccchh
Q 003199 645 GLAYLHHG----LLSPIIHRDIKSTNILLDVNYQPKVADFGIAK 684 (840)
Q Consensus 645 ~l~~LH~~----~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~ 684 (840)
.++.+... ....++|+|+++.||+++ + .+.++||+.+.
T Consensus 181 ~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~ 222 (328)
T 1zyl_A 181 LIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDAR 222 (328)
T ss_dssp HHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred HHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence 23333221 225688999999999999 4 78999998764
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.55 E-value=0.0063 Score=66.83 Aligned_cols=74 Identities=18% Similarity=0.166 Sum_probs=46.1
Q ss_pred cCeeeccCCcEEEEEEeCC-CcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCc-ceeeeEEecCccce
Q 003199 531 KNKVGQGGSGTVYKIDLNS-GEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNI-VKLYCYFSSLYCNL 608 (840)
Q Consensus 531 ~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~ 608 (840)
.+.|+.|-...+|++...+ +..+++|+..... .. .. ...+|..+++.+...++ .++++++.. .
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~---~i-------dR~~E~~vl~~L~~~gl~P~ll~~~~~----G 177 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DE---II-------NREREKKISCILYNKNIAKKIYVFFTN----G 177 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C-CS---CS-------CHHHHHHHHHHHTTSSSBCCEEEEETT----E
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hh---hc-------CHHHHHHHHHHHHhcCCCCCEEEEeCC----e
Confidence 3468889999999998765 4788888763211 10 00 01468888888864444 567776632 3
Q ss_pred EEEeecCCCCh
Q 003199 609 LVYEYMPNGNL 619 (840)
Q Consensus 609 lV~e~~~~gsL 619 (840)
+||||++|.++
T Consensus 178 ~v~e~I~G~~l 188 (458)
T 2qg7_A 178 RIEEFMDGYAL 188 (458)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEeeCCccC
Confidence 69999987444
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.54 E-value=0.0032 Score=55.86 Aligned_cols=36 Identities=19% Similarity=0.148 Sum_probs=18.1
Q ss_pred CCcEEEeeccccccccchhhhcCCCCCEEEccCCcC
Q 003199 166 KLRVLQLYNNSLSGEISSVIANSTTLTMLSLYDNSL 201 (840)
Q Consensus 166 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 201 (840)
+|+.|+|++|+|+.+.++.|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 345555555555544444455555555555555544
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.34 E-value=0.0032 Score=67.48 Aligned_cols=73 Identities=12% Similarity=0.157 Sum_probs=42.4
Q ss_pred CeeeccCCcEEEEEEeCC---------CcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCC-cceeeeEE
Q 003199 532 NKVGQGGSGTVYKIDLNS---------GEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKN-IVKLYCYF 601 (840)
Q Consensus 532 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~ 601 (840)
+.++.|....+|++...+ ++.+++|+........ .....|.++++.+...+ +.++++..
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~-----------~~~~~E~~~l~~L~~~g~~P~~~~~~ 107 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL-----------YNTISEFEVYKTMSKYKIAPQLLNTF 107 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT-----------SCHHHHHHHHHHHHHTTSSCCEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce-----------ecHHHHHHHHHHHHhcCCCCceEEec
Confidence 467888889999987654 2688888763321110 01346777777775333 34666544
Q ss_pred ecCccceEEEeecCCCCh
Q 003199 602 SSLYCNLLVYEYMPNGNL 619 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL 619 (840)
..++||||++|..+
T Consensus 108 ----~~~~v~e~i~G~~l 121 (369)
T 3c5i_A 108 ----NGGRIEEWLYGDPL 121 (369)
T ss_dssp ----TTEEEEECCCSEEC
T ss_pred ----CCcEEEEEecCCcC
Confidence 23789999987543
No 443
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.22 E-value=0.025 Score=54.04 Aligned_cols=101 Identities=14% Similarity=0.079 Sum_probs=67.0
Q ss_pred CChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccchhhhhccCCCCcce
Q 003199 617 GNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIAKVLQARGGKDSTT 696 (840)
Q Consensus 617 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 696 (840)
-+|.+.|......++++++|.++.|.+.+|.-.-.. +.-..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc------------
Confidence 478999998888999999999999999998776221 1111233456889999999887663 1110
Q ss_pred ecccccccccCccccccCCCCccccchhHHHHHHHHHhCC
Q 003199 697 TVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGR 736 (840)
Q Consensus 697 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~ 736 (840)
.....+.|||... ...+.+.=|||+|+++|.-+-=.
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDyg 133 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYG 133 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTT
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcC
Confidence 1122456888653 45678899999999999988633
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.88 E-value=0.019 Score=60.49 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=27.1
Q ss_pred CCeEecCCCCCCEEEcCCCCCeeecccchhh
Q 003199 655 SPIIHRDIKSTNILLDVNYQPKVADFGIAKV 685 (840)
Q Consensus 655 ~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a~~ 685 (840)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4689999999999999888899999987643
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.70 E-value=0.029 Score=60.10 Aligned_cols=148 Identities=18% Similarity=0.148 Sum_probs=81.6
Q ss_pred CeeeccCCcEEEEEEeCC--------CcEEEEEEecccccccc------cCchhhH---HHHHHHHHHHHHHhccC-CCC
Q 003199 532 NKVGQGGSGTVYKIDLNS--------GEVVAVKKLWSQRTKVS------ASDTDQL---QLDKGLKTEVETLGNIR-HKN 593 (840)
Q Consensus 532 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~------~~~~~~~---~~~~~~~~E~~~l~~l~-h~n 593 (840)
+.|..|-...+|++...+ +..|.+++.-... ... ....+.. ...+....|..+++.+. +.-
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~t-e~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAIL-QMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC------------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCc-ccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 457678888999987754 3678888763211 100 0000000 01123446888888885 333
Q ss_pred cceeeeEEecCccceEEEeecCCCChHH-----------------HhhcCC----CCCC--hHHHHHHHHHHH-------
Q 003199 594 IVKLYCYFSSLYCNLLVYEYMPNGNLWD-----------------ALHKGL----VHLD--WPTRHKIAFGVA------- 643 (840)
Q Consensus 594 iv~l~~~~~~~~~~~lV~e~~~~gsL~~-----------------~l~~~~----~~~~--~~~~~~i~~~i~------- 643 (840)
..++++++.. .+|+||+++-+|.. .+|... .... |....++..++.
T Consensus 137 ~Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~ 212 (401)
T 3f2s_A 137 GPKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE 212 (401)
T ss_dssp SCCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred CCeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence 5567777643 28999998754421 111111 1122 334444443321
Q ss_pred ---------------HHHH----HHhh-cCCCCeEecCCCCCCEEEcCC------CCCeeecccchh
Q 003199 644 ---------------QGLA----YLHH-GLLSPIIHRDIKSTNILLDVN------YQPKVADFGIAK 684 (840)
Q Consensus 644 ---------------~~l~----~LH~-~~~~~ivH~Dlk~~Nill~~~------~~~kl~Dfg~a~ 684 (840)
.-+. ++.. .....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 2322 122457899999999999876 789999998774
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.19 E-value=0.024 Score=61.32 Aligned_cols=74 Identities=9% Similarity=0.127 Sum_probs=46.1
Q ss_pred cCeeeccCCcEEEEEEeCC--------CcEEEEEEecccccccccCchhhHHHHHHHHHHHHHHhccCCCC-cceeeeEE
Q 003199 531 KNKVGQGGSGTVYKIDLNS--------GEVVAVKKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKN-IVKLYCYF 601 (840)
Q Consensus 531 ~~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~ 601 (840)
.+.+..|-...+|+....+ ++.+++|+..... .. . . +..+|..+++.+...+ ..++++.+
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~~-~--i-------dR~~E~~~l~~L~~~gi~P~l~~~~ 143 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-GK-F--Y-------DSKVELDVFRYLSNINIAPNIIADF 143 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC--C-C--C-------CHHHHHHHHHHHHHTTSSCCEEEEE
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-ch-h--c-------CHHHHHHHHHHHHhcCCCCCEEEEc
Confidence 3467788899999987653 5789998863221 11 0 0 1245777777774222 34556543
Q ss_pred ecCccceEEEeecCCCCh
Q 003199 602 SSLYCNLLVYEYMPNGNL 619 (840)
Q Consensus 602 ~~~~~~~lV~e~~~~gsL 619 (840)
. .++||||++|..+
T Consensus 144 ~----~~~I~efI~G~~l 157 (424)
T 3mes_A 144 P----EGRIEEFIDGEPL 157 (424)
T ss_dssp T----TEEEEECCCSEEC
T ss_pred C----CCEEEEEeCCccC
Confidence 2 3789999998653
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.42 E-value=0.14 Score=55.09 Aligned_cols=29 Identities=28% Similarity=0.380 Sum_probs=24.2
Q ss_pred eEecCCCCCCEEE------cCCCCCeeecccchhh
Q 003199 657 IIHRDIKSTNILL------DVNYQPKVADFGIAKV 685 (840)
Q Consensus 657 ivH~Dlk~~Nill------~~~~~~kl~Dfg~a~~ 685 (840)
++|+|+.+.||++ +++..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 3456789999998743
No 448
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=83.57 E-value=1.4 Score=29.75 Aligned_cols=11 Identities=36% Similarity=0.564 Sum_probs=5.1
Q ss_pred HHHhhhhhccc
Q 003199 481 LLLFLKRRFSK 491 (840)
Q Consensus 481 ~~~~~~~r~~~ 491 (840)
+++|++||+.+
T Consensus 31 ~~~~~RRR~~~ 41 (44)
T 2jwa_A 31 FGILIKRRQQK 41 (44)
T ss_dssp HHHHHHHHCSC
T ss_pred HHhheehhhhh
Confidence 34455555443
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=71.70 E-value=0.48 Score=51.93 Aligned_cols=61 Identities=11% Similarity=-0.073 Sum_probs=17.0
Q ss_pred cCeeeccCCcEEEEEEeCC-CcEEEE------EEecccccccccCchhhHHHHHHHHHHHHHHhccCCCCcceeeeEEe
Q 003199 531 KNKVGQGGSGTVYKIDLNS-GEVVAV------KKLWSQRTKVSASDTDQLQLDKGLKTEVETLGNIRHKNIVKLYCYFS 602 (840)
Q Consensus 531 ~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 602 (840)
.+.+| ||.||+|.+.. ..+||| |...... ...+....+.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~--------~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG--------VSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-------------------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCcccccccc--------ccccccccccccccccccccccccCCCcceEE
Confidence 45566 99999997764 367888 5543211 11222356778889999999999999987754
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=65.84 E-value=13 Score=35.50 Aligned_cols=116 Identities=11% Similarity=0.063 Sum_probs=74.6
Q ss_pred CCCCcceeeeEEecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHH-HHhhcCCCCeEecCCCCCCEE
Q 003199 590 RHKNIVKLYCYFSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLA-YLHHGLLSPIIHRDIKSTNIL 668 (840)
Q Consensus 590 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~-~LH~~~~~~ivH~Dlk~~Nil 668 (840)
.||.+ -...-.+.+...+.|+.-+++.=+..+. ..+..++++++.+|+.... +++. -+|--+.|+|++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceEE
Confidence 57777 2333355566555555543443333443 4678899999999888776 5554 588999999999
Q ss_pred EcCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 003199 669 LDVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVED 741 (840)
Q Consensus 669 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 741 (840)
+|.++.+++.-.|.-.. ++|.- .++..=.-.+=+++..++.++..|++
T Consensus 117 f~~~~~p~i~hRGi~~~--------------------lpP~e-----~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 117 FNRALEPFFLHVGVKES--------------------LPPDE-----WDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp ECTTCCEEESCCEETTT--------------------BSSCS-----CCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EeCCCcEEEEEcCCccc--------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999987776432 23321 11111122466777788888777653
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=63.37 E-value=9.4 Score=36.30 Aligned_cols=117 Identities=6% Similarity=0.066 Sum_probs=76.5
Q ss_pred CCCCcceeeeEEecCccceEEEeecCCCChHHHhhcCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeEecCCCCCCEEE
Q 003199 590 RHKNIVKLYCYFSSLYCNLLVYEYMPNGNLWDALHKGLVHLDWPTRHKIAFGVAQGLAYLHHGLLSPIIHRDIKSTNILL 669 (840)
Q Consensus 590 ~h~niv~l~~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ivH~Dlk~~Nill 669 (840)
.||+.+.. ..-.+.+...+.|+.-+.+.=+..+. ..+...+++++.+|+...++++. -+|--+.|+|+++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik----~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f 112 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIK----SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFF 112 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGG----GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHH----hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEE
Confidence 57877765 34444555444444433222222233 46788999999999998866664 3889999999999
Q ss_pred cCCCCCeeecccchhhhhccCCCCcceecccccccccCccccccCCCCccccchhHHHHHHHHHhCCCCCCC
Q 003199 670 DVNYQPKVADFGIAKVLQARGGKDSTTTVIAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELITGRKPVED 741 (840)
Q Consensus 670 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~ 741 (840)
+.++.+++.=.|+-..+ +|. ..++..=.-.+=+++..+++++..|++
T Consensus 113 ~~~~~p~i~~RGik~~l--------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 113 TRDGLPIAKTRGLQNVV--------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp CTTSCEEESCCEETTTB--------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred cCCCCEEEEEccCccCC--------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999999877764322 221 112222233467788889999888754
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=60.35 E-value=17 Score=29.74 Aligned_cols=45 Identities=16% Similarity=0.079 Sum_probs=20.8
Q ss_pred CcccCCccccCCCCCCEEeCCCCCCCccCCCCcccccccccccEEEecC
Q 003199 29 FTGQFPLSVFNLTNLEVLSFNENPGFKLWKLPESSIFRLTKLRIMVLAT 77 (840)
Q Consensus 29 i~~~~p~~~~~l~~L~~L~L~~N~~~~l~~l~~~~~~~l~~L~~L~L~~ 77 (840)
++.+...+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+.+
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~----v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN----IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT----SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc----hheEcHHHHhccCCccEEEEcC
Confidence 33344444555555555555443 3444444444444444444443
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=54.02 E-value=26 Score=28.60 Aligned_cols=47 Identities=19% Similarity=0.157 Sum_probs=33.1
Q ss_pred ccCCCCcccccccccccEEEecCccccccCCccccCCCCCcEEEccCC
Q 003199 55 KLWKLPESSIFRLTKLRIMVLATCALHGQIPASIGNVTSLTDLELTGN 102 (840)
Q Consensus 55 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 102 (840)
.++.+...+|.++++|+.+.|-.+ ++.+-..+|.++.+|+.+.+.+.
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 566777777888888887777764 44455667777777777777654
No 454
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=42.13 E-value=26 Score=23.68 Aligned_cols=20 Identities=25% Similarity=0.047 Sum_probs=9.4
Q ss_pred HHHHHHHHHHhhhhhccccc
Q 003199 474 AVIIFIGLLLFLKRRFSKQR 493 (840)
Q Consensus 474 ~~~~~~~~~~~~~~r~~~~~ 493 (840)
++++++..+.+....+++++
T Consensus 20 v~~v~ii~~~~~~~~RRRr~ 39 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRRKSI 39 (44)
T ss_dssp HHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHhhhhhh
Confidence 33334444555555555444
No 455
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=40.82 E-value=28 Score=23.53 Aligned_cols=7 Identities=57% Similarity=1.023 Sum_probs=2.6
Q ss_pred HHhhhhh
Q 003199 482 LLFLKRR 488 (840)
Q Consensus 482 ~~~~~~r 488 (840)
+++++||
T Consensus 32 ~~~~RRr 38 (44)
T 2ks1_B 32 GLFMRRR 38 (44)
T ss_dssp HHHHHTT
T ss_pred HHHhhhh
Confidence 3333333
No 456
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=28.83 E-value=50 Score=21.51 Aligned_cols=6 Identities=50% Similarity=0.855 Sum_probs=2.3
Q ss_pred HHhhhh
Q 003199 482 LLFLKR 487 (840)
Q Consensus 482 ~~~~~~ 487 (840)
.+|++|
T Consensus 31 ~~~~~r 36 (38)
T 2k1k_A 31 LVFRSR 36 (38)
T ss_dssp HHHHHC
T ss_pred HHHHee
Confidence 333443
No 457
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=22.07 E-value=1.6e+02 Score=33.47 Aligned_cols=44 Identities=25% Similarity=0.188 Sum_probs=33.1
Q ss_pred HHHHHHHHHHH--HHHHHHhhcCCCCeEecCCCCCCEEEcCCCCCeeecccch
Q 003199 633 PTRHKIAFGVA--QGLAYLHHGLLSPIIHRDIKSTNILLDVNYQPKVADFGIA 683 (840)
Q Consensus 633 ~~~~~i~~~i~--~~l~~LH~~~~~~ivH~Dlk~~Nill~~~~~~kl~Dfg~a 683 (840)
..+..++.++| +.+.|+=. -+|=.++|||++.+|++.=+|||.+
T Consensus 529 ~ar~nF~~SlA~~Svv~YILG-------lGDRH~~NILid~tG~v~HIDFG~~ 574 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLG-------VGDRHLDNLLLTTNGKLFHIDFGYI 574 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-------CCCCCTTTEEECTTSCEEECCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHcc-------CCCCCCcceEEeCCCCEEEEeehhh
Confidence 45566666665 44555543 2688999999999999999999986
No 458
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=21.63 E-value=1.3e+02 Score=22.06 Aligned_cols=11 Identities=18% Similarity=0.425 Sum_probs=4.6
Q ss_pred hhhhhcccccc
Q 003199 484 FLKRRFSKQRA 494 (840)
Q Consensus 484 ~~~~r~~~~~~ 494 (840)
++++|++++++
T Consensus 31 cvkcrhRrrqA 41 (70)
T 2klu_A 31 SVRSRHRRRQA 41 (70)
T ss_dssp HHHSSCCSSSC
T ss_pred hhHHHHHHHHH
Confidence 44444444443
No 459
>2fq3_A Transcription regulatory protein SWI3; four-helix bundle; 1.40A {Saccharomyces cerevisiae} SCOP: a.4.1.18
Probab=21.15 E-value=56 Score=26.84 Aligned_cols=46 Identities=4% Similarity=0.125 Sum_probs=35.6
Q ss_pred hhhhcccccCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 003199 763 IMEVLDKKLSGSFRDEMIQVLRIAIRCTSKSPATRPTMNEVVQLLA 808 (840)
Q Consensus 763 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~Rps~~evl~~L~ 808 (840)
..++.+.+.+..-++...++...+..++..+|.++.|++++.+.|.
T Consensus 33 lPEfF~g~~~~ktpe~Yl~iRN~iI~~yr~nP~~yLT~t~~r~~l~ 78 (104)
T 2fq3_A 33 LPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVS 78 (104)
T ss_dssp CGGGCCSSCTTSCHHHHHHHHHHHHHHHHHCTTSCCCHHHHHHHSC
T ss_pred ChHHhcCCCCCCCHHHHHHHHHHHHHHHHhCCceeeeHHHHHHHcc
Confidence 4455554444445677778888999999999999999999998883
Done!