Query 003207
Match_columns 839
No_of_seqs 250 out of 768
Neff 4.5
Searched_HMMs 46136
Date Thu Mar 28 19:06:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003207.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003207hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00151 potassium transporter 100.0 3E-267 6E-272 2267.0 70.2 824 13-839 14-852 (852)
2 PLN00150 potassium ion transpo 100.0 3E-251 6E-256 2134.6 66.8 766 55-839 9-779 (779)
3 PLN00148 potassium transporter 100.0 2E-247 5E-252 2103.9 65.9 762 69-839 1-785 (785)
4 PLN00149 potassium transporter 100.0 1E-246 3E-251 2099.3 68.4 759 70-839 2-779 (779)
5 TIGR00794 kup potassium uptake 100.0 5E-230 1E-234 1950.4 62.2 687 95-839 1-688 (688)
6 PRK10745 trkD potassium transp 100.0 4E-214 1E-218 1796.4 54.9 610 94-839 11-622 (622)
7 COG3158 Kup K+ transporter [In 100.0 3E-201 7E-206 1655.1 52.0 612 91-839 14-627 (627)
8 PF02705 K_trans: K+ potassium 100.0 2E-198 4E-203 1656.9 48.1 533 96-669 1-534 (534)
9 TIGR00911 2A0308 L-type amino 94.6 0.25 5.3E-06 57.1 11.6 102 264-369 165-272 (501)
10 COG0531 PotE Amino acid transp 93.1 2.5 5.4E-05 47.3 15.6 179 263-445 133-324 (466)
11 TIGR00909 2A0306 amino acid tr 90.3 5.4 0.00012 44.8 14.3 212 264-493 133-359 (429)
12 PF13520 AA_permease_2: Amino 88.9 4.2 9E-05 45.5 12.0 222 264-501 118-366 (426)
13 TIGR00930 2a30 K-Cl cotranspor 88.7 32 0.00069 44.0 20.6 25 264-288 203-227 (953)
14 PRK15049 L-asparagine permease 87.5 15 0.00033 43.0 15.8 23 266-288 146-168 (499)
15 TIGR03813 put_Glu_GABA_T putat 87.0 20 0.00044 41.3 16.3 58 335-392 195-254 (474)
16 TIGR00907 2A0304 amino acid pe 87.0 14 0.0003 42.5 15.0 24 545-568 454-477 (482)
17 PRK10435 cadB lysine/cadaverin 85.7 29 0.00062 39.7 16.5 23 267-289 124-146 (435)
18 PRK10655 potE putrescine trans 84.3 34 0.00074 38.8 16.2 42 266-307 125-169 (438)
19 TIGR00908 2A0305 ethanolamine 83.2 27 0.00059 39.7 14.8 24 266-289 123-146 (442)
20 TIGR00906 2A0303 cationic amin 82.3 55 0.0012 39.1 17.5 215 264-494 161-395 (557)
21 TIGR03810 arg_ornith_anti argi 80.9 88 0.0019 36.2 18.0 45 402-446 273-317 (468)
22 PRK10249 phenylalanine transpo 80.3 51 0.0011 38.0 15.9 114 267-383 138-259 (458)
23 PRK10746 putative transport pr 80.3 73 0.0016 36.9 17.2 30 86-121 11-40 (461)
24 PRK10238 aromatic amino acid t 79.5 41 0.0009 38.8 14.8 114 267-384 129-251 (456)
25 PRK10580 proY putative proline 73.5 93 0.002 35.8 15.5 100 268-371 127-238 (457)
26 PRK11387 S-methylmethionine tr 71.0 94 0.002 35.9 14.9 33 339-371 211-245 (471)
27 PRK11049 D-alanine/D-serine/gl 66.4 1.4E+02 0.003 34.6 15.0 107 338-445 215-332 (469)
28 PRK11021 putative transporter; 66.3 2.3E+02 0.005 32.0 17.6 100 264-373 115-218 (410)
29 PRK11357 frlA putative fructos 66.2 1.7E+02 0.0036 33.5 15.4 45 265-309 128-175 (445)
30 PRK10644 arginine:agmatin anti 66.1 72 0.0016 36.5 12.5 24 266-289 127-150 (445)
31 TIGR00910 2A0307_GadC glutamat 64.4 1.4E+02 0.0031 35.2 14.8 57 336-392 196-254 (507)
32 TIGR00905 2A0302 transporter, 62.8 2.5E+02 0.0055 32.5 16.2 172 265-445 130-320 (473)
33 PF14362 DUF4407: Domain of un 55.1 98 0.0021 33.9 10.7 55 483-537 12-70 (301)
34 TIGR00913 2A0310 amino acid pe 54.3 1.4E+02 0.003 34.4 12.2 104 341-445 204-327 (478)
35 TIGR01773 GABAperm gamma-amino 51.8 4.2E+02 0.0091 30.4 18.1 193 266-468 128-340 (452)
36 TIGR03428 ureacarb_perm permea 47.4 5.1E+02 0.011 30.1 20.2 25 264-288 144-168 (475)
37 PF00324 AA_permease: Amino ac 43.8 22 0.00048 40.9 3.7 36 336-371 202-239 (478)
38 PF06570 DUF1129: Protein of u 41.8 84 0.0018 32.8 7.2 21 544-564 179-199 (206)
39 PRK13108 prolipoprotein diacyl 41.3 59 0.0013 38.5 6.6 117 262-390 25-150 (460)
40 KOG4742 Predicted chitinase [G 41.0 12 0.00026 41.4 1.0 32 356-396 171-207 (286)
41 PF05297 Herpes_LMP1: Herpesvi 37.3 11 0.00024 41.9 0.0 62 506-570 124-190 (381)
42 COG4059 MtrE Tetrahydromethano 35.5 32 0.0007 37.1 3.0 30 541-570 258-287 (304)
43 PRK11909 cobalt transport prot 32.6 1.9E+02 0.0042 31.2 8.3 64 367-430 137-204 (230)
44 KOG3643 GABA receptor [Signal 31.2 34 0.00073 40.2 2.5 90 439-532 225-324 (459)
45 PRK10836 lysine transporter; P 28.3 1E+03 0.022 27.8 17.1 31 85-121 15-45 (489)
46 PF05545 FixQ: Cbb3-type cytoc 22.9 68 0.0015 26.2 2.3 30 553-582 19-48 (49)
47 KOG3145 Cystine transporter Cy 20.4 70 0.0015 36.1 2.4 90 265-368 234-342 (372)
48 PRK11492 hyfE hydrogenase 4 me 20.2 1E+03 0.023 25.5 11.0 128 442-585 79-213 (216)
49 PRK10197 gamma-aminobutyrate t 20.2 1.4E+03 0.029 26.5 17.2 24 265-288 107-130 (446)
50 TIGR02230 ATPase_gene1 F0F1-AT 20.1 5.2E+02 0.011 24.9 7.7 42 263-310 52-93 (100)
No 1
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=2.8e-267 Score=2266.96 Aligned_cols=824 Identities=69% Similarity=1.131 Sum_probs=741.5
Q ss_pred hhccccCCCCCCccccccccccCCCCCCCCccccccccc---------CCCccccccccc-CccccCchhhhhhccccCC
Q 003207 13 RLLTSVGSGGGGESRWVDGSEVDSESPPWSLSEENGARE---------GFGSMRRRLVKK-PKYDSLDVEAMEIAGAFGD 82 (839)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~r~d~~~~ea~~~~~~~~~ 82 (839)
...+...+++|.||||||++|+|+|+++ ++++|+++++ ++++.|+|++|+ ||+||||.||++++++++|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~e~~~~~~~~~~ 92 (852)
T PLN00151 14 NGSGGLVGTDSGESRWVDGSEDDSEDPA-SLDDDDDDRDSGGGMLEEEEDGNMRRRLIRTPPRVDSFDVEAMEIPGAHRH 92 (852)
T ss_pred CccCCcccCCCCCcccccCccccccCCc-ccccccccccccCCccccccccchhhhHhhCCCccchhhhccccccccccc
Confidence 3355566677999999999999998877 5555555443 567889999999 9999999999999998887
Q ss_pred CCCcccHHHHHHHHHhhcceeecccCcchHHHHHHhhccCCCCCccceehhHHHHHHHHHHhhhheeeEEEEEecCCCCC
Q 003207 83 HSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEG 162 (839)
Q Consensus 83 ~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~dvlGvLSLIfWtLtLiv~iKYv~ivLrAdn~GEG 162 (839)
|.++.++|+++.|||||||||||||||||||||+++|.+.++++++||+|+||||||||||||++|||+|||||||||||
T Consensus 93 ~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIlGvLSLIfWtLtLiv~iKYV~iVLrAdd~GEG 172 (852)
T PLN00151 93 DSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVLGALSLVLYTLILIPLAKYVLVVLWANDDGEG 172 (852)
T ss_pred ccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhheeeehHHHHHHHHHHHHHhheeEEEEecCCCCc
Confidence 77788888999999999999999999999999999997534579999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhhccccCCCCCCCccchhhccccCCCChhhHHHHHHHHHHhhcchhHHHHHHHHHhhhhhhhcccccccc
Q 003207 163 GTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPA 242 (839)
Q Consensus 163 GtfALysLi~r~~k~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~ik~~le~~~~~~~~l~~l~l~G~am~igDGviTPA 242 (839)
||||||||+|||+|++++||||++|+++|+|+++.|+++++|+.|+|++||+|+++|.+++++|++||||+||||+||||
T Consensus 173 GtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~lE~s~~~k~~ll~l~l~GtamviGDGvlTPA 252 (852)
T PLN00151 173 GTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERLETSSLLKKLLLLLVLAGTSMVIGDGVLTPA 252 (852)
T ss_pred hHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccCCCCceehhhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcccceecCH
Q 003207 243 ISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNP 322 (839)
Q Consensus 243 ISVLSAVeGL~v~~p~l~~~~Vv~isv~ILv~LF~iQr~GT~kVG~~FgPImllWF~~l~~iGiynI~~~~p~Vl~AlnP 322 (839)
|||||||||||+++|++++++||||||+||++||++|||||+|||++|||||++||++||++|+|||++|||+||+||||
T Consensus 253 ISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~iGiynI~~~~p~Vl~AlnP 332 (852)
T PLN00151 253 MSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGIGIYNLVKYDSSVFRAFNP 332 (852)
T ss_pred hhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHHHHHHHHhcCHHHHhhhCH
Confidence 99999999999999999889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCcchhhhhhhhHHHhhchhhhhcCCCCCCccchhhhhHHhHHHHHHHhhcchhhHhhcCCCcccCccccc
Q 003207 323 IYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDS 402 (839)
Q Consensus 323 ~ya~~ff~~n~~~g~~~LG~VvL~iTGaEALyADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~~ 402 (839)
+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||||++||++++||||++
T Consensus 333 ~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQaA~L~~~p~~~~npFy~s 412 (852)
T PLN00151 333 VYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQAAYLMKNPDSAEQIFFSS 412 (852)
T ss_pred HHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcchHHHHhcCcccccCcHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhheeeEEeCCh
Q 003207 403 VPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQST 482 (839)
Q Consensus 403 iP~~~~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kIvhTS~~~~GQIYIP~VNwlLmi~~i~vv~~F~~S 482 (839)
+|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||+|
T Consensus 413 vP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~vNw~Lmv~~i~v~l~F~~s 492 (852)
T PLN00151 413 VPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVINWFLLVMCLVVVCSFRSI 492 (852)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHhheeeecCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhchhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhcccCCCcHHHHHHHHhHhhhhhh
Q 003207 483 TDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIW 562 (839)
Q Consensus 483 ~~l~~AYGiAV~~vM~iTT~L~~~vm~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pL~ia~v~~~iM~tW 562 (839)
++|||||||||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||+||++|++++++|++|
T Consensus 493 ~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~GGW~Pl~la~v~~~iM~~W 572 (852)
T PLN00151 493 TDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDGGWIPLVFASVFLCIMYIW 572 (852)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCC
Q 003207 563 NYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRL 642 (839)
Q Consensus 563 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~RvpG~avf~t~~~~gvP~~~~h~l~~~~~lH~~vvfv~v~~~~vP~V~~ 642 (839)
|||++++|+++.++++|++++.++.++.++.||||+|+|||++++|+|++|.||++|||++||++||||||++|+|+||+
T Consensus 573 ~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alHe~~Vfv~ik~~~vP~V~~ 652 (852)
T PLN00151 573 NYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIHSTIIFVCIKYVPVPVVPQ 652 (852)
T ss_pred HHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccceEEEEEEEECcccccCh
Confidence 99999999999999999999999998888999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEecCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHHhHHHHHhhhcccCcccccc-ccCCCCCCC
Q 003207 643 EERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVS-VASRDPEAS 721 (839)
Q Consensus 643 ~eR~~v~~~~~~~~~~~r~v~ryGy~d~~~~~~~~f~~~l~~~l~~fi~~e~~~~~l~~~~~~~~~~~~~-~~~~~~~~~ 721 (839)
+|||+++|++|+++++|||++||||||..+++++|||++|+++|++|||+|+.+..++++..+..+++.+ ........+
T Consensus 653 ~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (852)
T PLN00151 653 EERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGNDDTDDEDSVTSSRVLIAP 732 (852)
T ss_pred hheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccCC
Confidence 9999999999999999999999999999874489999999999999999998632222111000001000 000000000
Q ss_pred CCCCccccccccccccccccCC-CCCccccCCCCC---CcccccCCCCCHHHhHHHHHHhHhcCcEEEEeeceEEecCCc
Q 003207 722 GSYGTEELKIPLMHERRFDESG-TSASEETTSALP---SSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKS 797 (839)
Q Consensus 722 ~~~s~~~~~~p~~~~~~~~~~e-~~~~~s~~~~~~---~~r~~~~~~~~~~~e~~~l~~a~e~gvvy~lG~~~V~a~k~S 797 (839)
+ ++..+...|.+.......++ ..+..++....+ +.++ .+.++++++|+++|++|+|+||+|++||++|+||++|
T Consensus 733 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~El~~l~~a~e~Gv~yilG~~~v~a~~~S 810 (852)
T PLN00151 733 N-GSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMS-SDEDQSLEYELSFIREAKESGVVYLLGHGDVRARKNS 810 (852)
T ss_pred C-cccccccccccccccccccccccccccccccccccccccc-cccCccHHHHHHHHHHHHHcCcEEEeccceEEEcCCC
Confidence 0 00001111111110000000 000011000000 1112 2335688999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHHHhccccccccccCCCCEEEEeeEEEC
Q 003207 798 FFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 839 (839)
Q Consensus 798 ~~~KKi~i~~~y~fLrrN~r~~~~~l~IP~~rlveVG~~yeI 839 (839)
+++||+++|++|+|||||||++.+.|+|||+|++||||+|+|
T Consensus 811 ~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 811 WFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred cHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999997
No 2
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=3e-251 Score=2134.57 Aligned_cols=766 Identities=49% Similarity=0.897 Sum_probs=697.5
Q ss_pred ccccccccc-Ccccc-CchhhhhhccccCCCCCcccHHHHHHHHHhhcceeecccCcchHHHHHHhhccCCCCCccceeh
Q 003207 55 SMRRRLVKK-PKYDS-LDVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLG 132 (839)
Q Consensus 55 ~~~~~~~~~-~r~d~-~~~ea~~~~~~~~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~dvlG 132 (839)
++|+|++|+ ||+|+ +|+||+++.|+++ .++.+|+.++.|||||+|||||||||||||||+++|.+++.+++|||+|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~ilG 86 (779)
T PLN00150 9 SNQGRLWDLDQRITRPLGVDADSVRSMYF--SSPNWPKVIMHLAYQSLGVVYGDLGTSPLYVFKSTFANVGVKNNDDIIG 86 (779)
T ss_pred CCccchhhCCCCCCCccCcchhhcccccc--cccccHHHHHHHHHhccCeEeCcCccchHHHHHHHhcCCCCCCHHHhHh
Confidence 568999999 99999 9999999999854 5689999999999999999999999999999999997644689999999
Q ss_pred hHHHHHHHHHHhhhheeeEEEEEecCCCCChHHHHHHHHhhhccccCCCCCCCccchhhccccCCCChhhHHHHHHHHHH
Q 003207 133 ALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDIL 212 (839)
Q Consensus 133 vLSLIfWtLtLiv~iKYv~ivLrAdn~GEGGtfALysLi~r~~k~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~ik~~l 212 (839)
+||||||||||||++|||+|||||||||||||||||||+|||+|++++|||+++|+++++|+++ +..|..++|++|
T Consensus 87 vLSLIfWtLtLiv~iKYV~ivLrAdn~GEGGtfALysLl~r~aki~l~~~~~~~~~~~s~~~~~----~~~r~~~~k~~l 162 (779)
T PLN00150 87 ALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCRYCNISLLPNQHPTDVELTTYVVD----NMNRKTRIQRKL 162 (779)
T ss_pred HHHHHHHHHHHHHHHhheeEEEEccCCCCcchhhHHHHHhhhcccccCCccccchhhhhhcccc----cchhhhHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999863 344556799999
Q ss_pred hhcchhHHHHHHHHHhhhhhhhcccccccchhhhhhcccccccccCCCCceehhhHHHHHHHHHHhhhccccccccchhh
Q 003207 213 ERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAP 292 (839)
Q Consensus 213 e~~~~~~~~l~~l~l~G~am~igDGviTPAISVLSAVeGL~v~~p~l~~~~Vv~isv~ILv~LF~iQr~GT~kVG~~FgP 292 (839)
|+++.+|.+++++|++|+||+||||+||||||||||||||++..|++++++||||||+||++||++||+||+|||++|||
T Consensus 163 E~~~~~~~~l~~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgP 242 (779)
T PLN00150 163 ENSRVWQNVLLLIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAP 242 (779)
T ss_pred hcchHHHHHHHHHHHHHHHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhcc
Confidence 99998999999999999999999999999999999999999999999889999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhccccCcccceecCHHHHHHHHHhcCcchhhhhhhhHHHhhchhhhhcCCCCCCccchhhhhHHh
Q 003207 293 VLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLV 372 (839)
Q Consensus 293 ImllWF~~l~~iGiynI~~~~p~Vl~AlnP~ya~~ff~~n~~~g~~~LG~VvL~iTGaEALyADlGHFg~~~Iqiaw~~~ 372 (839)
||++||++||++|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++
T Consensus 243 Im~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~ 322 (779)
T PLN00150 243 IFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSL 322 (779)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcchhhHhhcCCCcccCcccccccCcchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCceeEEecC
Q 003207 373 VFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTS 452 (839)
Q Consensus 373 V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~~iP~~~~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kIvhTS 452 (839)
|||||+|||+||||||++||++.+||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||
T Consensus 323 V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS 402 (779)
T PLN00150 323 VYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTS 402 (779)
T ss_pred HHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCceeechhHHHHHHHhheeeEEeCChhhhhhhhhchhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Q 003207 453 RKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELL 532 (839)
Q Consensus 453 ~~~~GQIYIP~VNwlLmi~~i~vv~~F~~S~~l~~AYGiAV~~vM~iTT~L~~~vm~~vw~~~~~~~~~f~~~F~~ie~~ 532 (839)
++++||||||+|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++
T Consensus 403 ~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~ 482 (779)
T PLN00150 403 NKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGI 482 (779)
T ss_pred cccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHhcccCCCcHHHHHHHHhHhhhhhhhhhHHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhH
Q 003207 533 YMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSI 612 (839)
Q Consensus 533 f~sa~l~K~~~GGW~pL~ia~v~~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~RvpG~avf~t~~~~gvP~~ 612 (839)
|||||+.||+||||+||++|++++++|++||||++++|+++.++++|++++.++.++.++.||||+|+|||++++|+|++
T Consensus 483 f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~ 562 (779)
T PLN00150 483 YFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPL 562 (779)
T ss_pred HHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999988888777889999999999999999999
Q ss_pred HHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHH
Q 003207 613 FGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRK 692 (839)
Q Consensus 613 ~~h~l~~~~~lH~~vvfv~v~~~~vP~V~~~eR~~v~~~~~~~~~~~r~v~ryGy~d~~~~~~~~f~~~l~~~l~~fi~~ 692 (839)
|.||++|||++||++||||||++|+|+||++|||+++++++++|++|||++||||||..++ ++|||++|+++|++|||+
T Consensus 563 f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d-~~dFE~~LvesL~~FIr~ 641 (779)
T PLN00150 563 FSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKK-DDNFEQLLIASLERFIEI 641 (779)
T ss_pred HHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCccc-chHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999876 899999999999999999
Q ss_pred HhHHHHHhhhcccCccccccccCCCCCCCCCC-CccccccccccccccccCCCCCccccCCCCC-Ccccc-cCCCCCHHH
Q 003207 693 EAQDLALERNLLESDLDSVSVASRDPEASGSY-GTEELKIPLMHERRFDESGTSASEETTSALP-SSVMA-LDEDPSLEY 769 (839)
Q Consensus 693 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~~~p~~~~~~~~~~e~~~~~s~~~~~~-~~r~~-~~~~~~~~~ 769 (839)
|+.+...+++....+.+.++...+ +++. +..+...+....+. . +.+ ....+ +.+.+ .+.++++++
T Consensus 642 e~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-----~--~~~-~~~~~~~~~~~~~~~~~~v~e 709 (779)
T PLN00150 642 ESFREQSDLESMAASWTPEELMGE----GNSVGSGLFTQYDQSDINF-----A--TSQ-EWKRPSSQEDSVSGHSSDTQD 709 (779)
T ss_pred hhhccccccccccccccccccccc----CCccccccccccccccccc-----c--ccc-ccccccccccccccccccHHH
Confidence 985321111100000000000000 0000 00000000000000 0 000 00001 01111 233568899
Q ss_pred hHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHHHHHhccccccccccCCCCEEEEeeEEEC
Q 003207 770 ELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 839 (839)
Q Consensus 770 e~~~l~~a~e~gvvy~lG~~~V~a~k~S~~~KKi~i~~~y~fLrrN~r~~~~~l~IP~~rlveVG~~yeI 839 (839)
|+++|++|+|+||+|++||++|+||++|+++||+++|++|+|||||||++.+.|+|||+|+|||||+|||
T Consensus 710 El~~L~~A~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 710 EVAFLNKCKEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred HHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997
No 3
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=2.1e-247 Score=2103.85 Aligned_cols=762 Identities=46% Similarity=0.855 Sum_probs=678.2
Q ss_pred CchhhhhhccccCCCCCcccHHH---HHHHHHhhcceeecccCcchHHHHHHhhcc-C-CCCCccceehhHHHHHHHHHH
Q 003207 69 LDVEAMEIAGAFGDHSKDVSVWH---TLALAFQTLGVVYGDMGTSPLYVYSDVFSK-V-QIETEIDVLGALSLVMYTITL 143 (839)
Q Consensus 69 ~~~ea~~~~~~~~~~~~~~~~~~---~l~La~~alGVVyGDIGTSPLYv~~~~F~~-~-~~~~~~dvlGvLSLIfWtLtL 143 (839)
||.|++-.+..+ .++.+|+. ++.|||||||||||||||||||||+++|.+ + ..+++|||+|+||||||||||
T Consensus 1 ~~~~~~~~~~~~---~~~~~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtL 77 (785)
T PLN00148 1 MEAESGVSPSRN---PSQLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTL 77 (785)
T ss_pred CCcccCCCCCCC---CCcchhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHH
Confidence 456666554332 34457766 899999999999999999999999999964 2 237999999999999999999
Q ss_pred hhhheeeEEEEEecCCCCChHHHHHHHHhhhccccCCCCCCCccchhhccccCCCChhhHHHHHHHHHHhhcchhHHHHH
Q 003207 144 IPLAKYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLL 223 (839)
Q Consensus 144 iv~iKYv~ivLrAdn~GEGGtfALysLi~r~~k~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~ik~~le~~~~~~~~l~ 223 (839)
||++|||+|||||||||||||||||||+|||+|++++||||++|+++++|+.+.++.+ +++.++|++||+|+++|.+++
T Consensus 78 iv~iKYV~ivlrAdn~GEGG~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~-~~~~~~k~~lE~~~~~~~~ll 156 (785)
T PLN00148 78 IPLLKYVTILLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQT-VGSSPLKRFLEKHKRLRTALL 156 (785)
T ss_pred HHHHhheEEEEEecCCCCchHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccc-hhhhHHHHHhhhchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999988655544 667789999999999999999
Q ss_pred HHHHhhhhhhhcccccccchhhhhhcccccccccCCCCceehhhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHh
Q 003207 224 LLVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGS 303 (839)
Q Consensus 224 ~l~l~G~am~igDGviTPAISVLSAVeGL~v~~p~l~~~~Vv~isv~ILv~LF~iQr~GT~kVG~~FgPImllWF~~l~~ 303 (839)
++|++|+||+||||+|||||||||||||||+++|++++++||||||+||++||++||+||+|||++|||||++||++||+
T Consensus 157 ~l~l~G~am~~gDgvlTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~ 236 (785)
T PLN00148 157 LVVLFGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGS 236 (785)
T ss_pred HHHHHHHHHHHhccccchhHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred hhhhhccccCcccceecCHHHHHHHHHhcCcchhhhhhhhHHHhhchhhhhcCCCCCCccchhhhhHHhHHHHHHHhhcc
Q 003207 304 IGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMG 383 (839)
Q Consensus 304 iGiynI~~~~p~Vl~AlnP~ya~~ff~~n~~~g~~~LG~VvL~iTGaEALyADlGHFg~~~Iqiaw~~~V~PaLlL~Y~G 383 (839)
+|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+|
T Consensus 237 iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~G 316 (785)
T PLN00148 237 IGLYNIIHWNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMG 316 (785)
T ss_pred HHHHHHHhcCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhcCCCcccCcccccccCcchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCceeEEecCCccCCceeech
Q 003207 384 QAAYLMKYPDSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPV 463 (839)
Q Consensus 384 QgA~Ll~~p~~~~npFy~~iP~~~~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kIvhTS~~~~GQIYIP~ 463 (839)
|||||++||++++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++++||||||+
T Consensus 317 QaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~ 396 (785)
T PLN00148 317 QAAFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPE 396 (785)
T ss_pred hHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHhheeeEEeCChhhhhhhhhchhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhcccC
Q 003207 464 INWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAE 543 (839)
Q Consensus 464 VNwlLmi~~i~vv~~F~~S~~l~~AYGiAV~~vM~iTT~L~~~vm~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~ 543 (839)
|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+|
T Consensus 397 vNw~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~ 476 (785)
T PLN00148 397 INWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQ 476 (785)
T ss_pred HHHHHHHHHHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHhHhhhhhhhhhHHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCcc
Q 003207 544 GGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAI 623 (839)
Q Consensus 544 GGW~pL~ia~v~~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~RvpG~avf~t~~~~gvP~~~~h~l~~~~~l 623 (839)
|||+||++|++++++|++||||++++|+++.++++|++++.++.++.++.||||+|+|||++++|+|++|.||++|||++
T Consensus 477 GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~l 556 (785)
T PLN00148 477 GGWVPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAF 556 (785)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999999998888887788999999999999999999999999999999
Q ss_pred ceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHHhHHHHHhhhc
Q 003207 624 HSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNL 703 (839)
Q Consensus 624 H~~vvfv~v~~~~vP~V~~~eR~~v~~~~~~~~~~~r~v~ryGy~d~~~~~~~~f~~~l~~~l~~fi~~e~~~~~l~~~~ 703 (839)
||++||||||++|+|+||++|||+++|+++++|++|||++||||||..++ ++|||++|+++|++|||+|+.+...+ ..
T Consensus 557 He~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~-~~dFe~~Lv~~L~~FIr~e~~~~~~~-~~ 634 (785)
T PLN00148 557 HKVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRD-DGDFENMLVQSIAEFIQMEAEEPQSS-AS 634 (785)
T ss_pred cceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCccccc-chHHHHHHHHHHHHHHHhhhhccccc-cc
Confidence 99999999999999999999999999999999999999999999999877 99999999999999999998421000 00
Q ss_pred ccCcccc-ccccCCCCCCCCCCCcccccccc---ccccccccC---CCCCccc----cCCC-C--CCcccc----cCCCC
Q 003207 704 LESDLDS-VSVASRDPEASGSYGTEELKIPL---MHERRFDES---GTSASEE----TTSA-L--PSSVMA----LDEDP 765 (839)
Q Consensus 704 ~~~~~~~-~~~~~~~~~~~~~~s~~~~~~p~---~~~~~~~~~---e~~~~~s----~~~~-~--~~~r~~----~~~~~ 765 (839)
++.+.++ .+..... +... ...+...|. ..+.....+ .....++ .++. . .+.++. .+.++
T Consensus 635 ~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 711 (785)
T PLN00148 635 ESSSNDGRMAVISTR--DVQS-SSLLMVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDP 711 (785)
T ss_pred ccccccccccccccc--cccc-ccccccccccccccccccccccccccccccccccccccccccccceeecccccccccc
Confidence 0000000 0000000 0000 000000000 000000000 0000000 0000 0 112221 11346
Q ss_pred CHHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHHHHHhccccccccccCCCCEEEEeeEEEC
Q 003207 766 SLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 839 (839)
Q Consensus 766 ~~~~e~~~l~~a~e~gvvy~lG~~~V~a~k~S~~~KKi~i~~~y~fLrrN~r~~~~~l~IP~~rlveVG~~yeI 839 (839)
++++|+++|++|+|+||+|++||++|+||++|+++||+++|++|+|||||||++.+.|+|||+|+|||||+|||
T Consensus 712 ~~~~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 712 SVREELMDLIEAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred hHHHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999997
No 4
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=1.3e-246 Score=2099.25 Aligned_cols=759 Identities=48% Similarity=0.828 Sum_probs=674.9
Q ss_pred chhhhhhccccCCCCCcccHHHHHHHHHhhcceeecccCcchHHHHHHhhccC--CCCCccceehhHHHHHHHHHHhhhh
Q 003207 70 DVEAMEIAGAFGDHSKDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSKV--QIETEIDVLGALSLVMYTITLIPLA 147 (839)
Q Consensus 70 ~~ea~~~~~~~~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~--~~~~~~dvlGvLSLIfWtLtLiv~i 147 (839)
|.|.+.. .||.++.+|+.++.|||||+|||||||||||||||+++|.++ ..++++||+|+||||||||||||++
T Consensus 2 ~~~~~~~----~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvLSLIfWtL~Liv~i 77 (779)
T PLN00149 2 DLEGGSP----QNHVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPLL 77 (779)
T ss_pred CcccCcc----ccccccccHHHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHhhhHHHHHHHHHHHHHhh
Confidence 4454443 345567899999999999999999999999999999999652 2379999999999999999999999
Q ss_pred eeeEEEEEecCCCCChHHHHHHHHhhhccccCCCCCCCccchhhccccCCCCh---hhHHHHHHHHHHhhcchhHHHHHH
Q 003207 148 KYVFVVLKANDNGEGGTFALYSLISRYAKVNMLPNRQPADEQISSFRLKLPTP---ELERALQLKDILERTSSLKTLLLL 224 (839)
Q Consensus 148 KYv~ivLrAdn~GEGGtfALysLi~r~~k~~~ip~~~~~d~~~s~~~~~~~~~---~~~~~~~ik~~le~~~~~~~~l~~ 224 (839)
|||+|||||||||||||||||||+|||+|++++||||++|+++|+|+++.|+. +.+++.++|++||+++.+|.++++
T Consensus 78 KYv~ivlrAdn~GEGGtfALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll~ 157 (779)
T PLN00149 78 KYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLLV 157 (779)
T ss_pred hhEEEEEEecCCCCchHHHHHHHHHHhccccCCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998877553 345678899999999989999999
Q ss_pred HHHhhhhhhhcccccccchhhhhhcccccccccCCCCcee-hhhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHh
Q 003207 225 LVLMGTSLIIGDGILTPAISVMSAVSGLQGEIHGFGESAL-VIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGS 303 (839)
Q Consensus 225 l~l~G~am~igDGviTPAISVLSAVeGL~v~~p~l~~~~V-v~isv~ILv~LF~iQr~GT~kVG~~FgPImllWF~~l~~ 303 (839)
+|++|+||+||||+||||||||||||||++..|...++++ |||||+||++||++||+||+|||++|||||++||++||+
T Consensus 158 l~l~G~~m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~ 237 (779)
T PLN00149 158 LALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISA 237 (779)
T ss_pred HHHHHHHHHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999976545555 999999999999999999999999999999999999999
Q ss_pred hhhhhccccCcccceecCHHHHHHHHHhcCcchhhhhhhhHHHhhchhhhhcCCCCCCccchhhhhHHhHHHHHHHhhcc
Q 003207 304 IGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMG 383 (839)
Q Consensus 304 iGiynI~~~~p~Vl~AlnP~ya~~ff~~n~~~g~~~LG~VvL~iTGaEALyADlGHFg~~~Iqiaw~~~V~PaLlL~Y~G 383 (839)
+|+|||++|||+||+||||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+|
T Consensus 238 iGiyni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~G 317 (779)
T PLN00149 238 IGVYNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMG 317 (779)
T ss_pred HHHHHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhcCCC---cccCcccccccCcchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCceeEEecCCccCCcee
Q 003207 384 QAAYLMKYPD---SANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIY 460 (839)
Q Consensus 384 QgA~Ll~~p~---~~~npFy~~iP~~~~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kIvhTS~~~~GQIY 460 (839)
|||||++||+ +++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++++||||
T Consensus 318 QaA~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIY 397 (779)
T PLN00149 318 QAAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIY 397 (779)
T ss_pred HHHHHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCcee
Confidence 9999999996 5666999999999999999999999999999999999999999999999999999999999999999
Q ss_pred echhHHHHHHHhheeeEEeCChhhhhhhhhchhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhc
Q 003207 461 IPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSK 540 (839)
Q Consensus 461 IP~VNwlLmi~~i~vv~~F~~S~~l~~AYGiAV~~vM~iTT~L~~~vm~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~K 540 (839)
||+|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.|
T Consensus 398 IP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~K 477 (779)
T PLN00149 398 IPEINWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIK 477 (779)
T ss_pred eHHHHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcHHHHHHHHhHhhhhhhhhhHHHHHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhc
Q 003207 541 IAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSL 620 (839)
Q Consensus 541 ~~~GGW~pL~ia~v~~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~RvpG~avf~t~~~~gvP~~~~h~l~~~ 620 (839)
|+||||+||++|++++++|++||||++++|+++.++++|++++.++.++.++.||||+|+|||++.+|+|++|.||++||
T Consensus 478 i~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~ 557 (779)
T PLN00149 478 FLEGAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNL 557 (779)
T ss_pred hcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999998888888889999999999999999999999999999
Q ss_pred CccceEEEEEEEEEecccccCCCceEEEEEecCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHHhHHHHHh
Q 003207 621 PAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALE 700 (839)
Q Consensus 621 ~~lH~~vvfv~v~~~~vP~V~~~eR~~v~~~~~~~~~~~r~v~ryGy~d~~~~~~~~f~~~l~~~l~~fi~~e~~~~~l~ 700 (839)
|++||++||||||++|+|+||++|||+++|++++++|+|||++||||||..++ ++|||++|+++|++|||+|+.+...+
T Consensus 558 ~~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d-~~dFE~~Lve~L~~FI~~e~~~~~~~ 636 (779)
T PLN00149 558 PAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKD-DMEFEKDLVCSIAEFIRSEKPEPNGA 636 (779)
T ss_pred CcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeecccccc-chHHHHHHHHHHHHHHHhhhhccccc
Confidence 99999999999999999999999999999999999999999999999999887 89999999999999999997421111
Q ss_pred hhcccCcccc-ccccCCCCCCCCCCCcccc---ccccccccccccCCCCCccccCCCC--CCcccc----cCCCCCHHHh
Q 003207 701 RNLLESDLDS-VSVASRDPEASGSYGTEEL---KIPLMHERRFDESGTSASEETTSAL--PSSVMA----LDEDPSLEYE 770 (839)
Q Consensus 701 ~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~---~~p~~~~~~~~~~e~~~~~s~~~~~--~~~r~~----~~~~~~~~~e 770 (839)
++.. .+.++ .+..... .. +..+. ..+.........+..++..+..... .+.++. .+.++++++|
T Consensus 637 ~~~~-~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eE 710 (779)
T PLN00149 637 PENE-EGEDERMTVVGTC---ST--HLEGIQLREDDSDKQEPAGTSELREIRSPPVSRPKKRVRFVVPESPKIDRGAREE 710 (779)
T ss_pred cccc-ccccccccccccc---cc--cccccccccccccccccccccccccccCccccCcccceeeccccccccchhHHHH
Confidence 0000 00000 0000000 00 00000 0000000000000000000000000 112221 1234678999
Q ss_pred HHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHHHHHhccccccccccCCCCEEEEeeEEEC
Q 003207 771 LSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLRRNCRAGAANMSVPHMNILQVGMTYMV 839 (839)
Q Consensus 771 ~~~l~~a~e~gvvy~lG~~~V~a~k~S~~~KKi~i~~~y~fLrrN~r~~~~~l~IP~~rlveVG~~yeI 839 (839)
+++|++|+|+||+|++||++|+||++|+++||+++||+|+|||||||++.+.|+|||+|+|||||+|||
T Consensus 711 l~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 711 LQELMEAREAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HHHHHHHHHcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=5.3e-230 Score=1950.36 Aligned_cols=687 Identities=45% Similarity=0.804 Sum_probs=651.3
Q ss_pred HHHhhcceeecccCcchHHHHHHhhccCCCCCccceehhHHHHHHHHHHhhhheeeEEEEEecCCCCChHHHHHHHHhhh
Q 003207 95 LAFQTLGVVYGDMGTSPLYVYSDVFSKVQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRY 174 (839)
Q Consensus 95 La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~dvlGvLSLIfWtLtLiv~iKYv~ivLrAdn~GEGGtfALysLi~r~ 174 (839)
|++||||||||||||||||||+++|.+ +.+++|||+|+||||||||||++++|||+|||||||||||||||||||+||+
T Consensus 1 La~~alGvVyGDIGTSPLY~~~~~f~~-~~~~~~~ilGvlSLIfWtL~livtiKYv~ivlrAdn~GEGGi~AL~sL~~r~ 79 (688)
T TIGR00794 1 LAFQSLGVIYGDIGTSPLYVLSSTFSG-GFPTERDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLIGRY 79 (688)
T ss_pred CcceeeeeEeCcCcCCHHHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHh
Confidence 579999999999999999999999965 3579999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCccchhhccccCCCChhhHHHHHHHHHHhhcchhHHHHHHHHHhhhhhhhcccccccchhhhhhcccccc
Q 003207 175 AKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQG 254 (839)
Q Consensus 175 ~k~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~ik~~le~~~~~~~~l~~l~l~G~am~igDGviTPAISVLSAVeGL~v 254 (839)
+|++.+||||++|+++++|+.+.++. .+|..++|+++|++++.|++++++|++|+||+||||+||||||||||||||++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl~v 158 (688)
T TIGR00794 80 AKISARPVHQELDRAESSYSTKSPNL-LNKTTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGLEI 158 (688)
T ss_pred ccccCCCcccchhhhhhhcccccccc-cchhhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccc
Confidence 99999999999999999999887776 56778999999999888999999999999999999999999999999999999
Q ss_pred cccCCCCceehhhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcccceecCHHHHHHHHHhcCc
Q 003207 255 EIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGK 334 (839)
Q Consensus 255 ~~p~l~~~~Vv~isv~ILv~LF~iQr~GT~kVG~~FgPImllWF~~l~~iGiynI~~~~p~Vl~AlnP~ya~~ff~~n~~ 334 (839)
..|++++++||||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+|+++||.+||+
T Consensus 159 ~~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~ 238 (688)
T TIGR00794 159 VAPSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGT 238 (688)
T ss_pred cCCCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCC
Confidence 99999889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhhhHHHhhchhhhhcCCCCCCccchhhhhHHhHHHHHHHhhcchhhHhhcCCCcccCcccccccCcchHHHHHH
Q 003207 335 DAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVL 414 (839)
Q Consensus 335 ~g~~~LG~VvL~iTGaEALyADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~~iP~~~~wP~~vl 414 (839)
.||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++
T Consensus 239 ~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vl 318 (688)
T TIGR00794 239 VGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFII 318 (688)
T ss_pred ceeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHhhhhhHHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhheeeEEeCChhhhhhhhhchhh
Q 003207 415 AALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEV 494 (839)
Q Consensus 415 AtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kIvhTS~~~~GQIYIP~VNwlLmi~~i~vv~~F~~S~~l~~AYGiAV~ 494 (839)
||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||+|++||+|||+||+
T Consensus 319 AtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt 398 (688)
T TIGR00794 319 ATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVT 398 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhcccCCCcHHHHHHHHhHhhhhhhhhhHHHHHHHHH
Q 003207 495 GVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEV 574 (839)
Q Consensus 495 ~vM~iTT~L~~~vm~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pL~ia~v~~~iM~tW~~G~~~~~~~~~ 574 (839)
+||+|||+|+++||+.+||||++++++|+++|+.+|++||+||+.||+||||+||++|++++++|++|+||++++++++.
T Consensus 399 ~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~ 478 (688)
T TIGR00794 399 GTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDH 478 (688)
T ss_pred hhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChHHHHHhcCCCC-CcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecC
Q 003207 575 REKISMDFLLDLGSTLG-TVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGP 653 (839)
Q Consensus 575 ~~~~~~~~~~~~~~~~~-~~RvpG~avf~t~~~~gvP~~~~h~l~~~~~lH~~vvfv~v~~~~vP~V~~~eR~~v~~~~~ 653 (839)
++++|++++++.+.+.. .+|+||+|+|||++++++|++|.||++|||++||++||+||+++|+|+||++||++++++++
T Consensus 479 ~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~ 558 (688)
T TIGR00794 479 EHRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGP 558 (688)
T ss_pred hcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcC
Confidence 99999999998665444 48999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHHhHHHHHhhhcccCccccccccCCCCCCCCCCCcccccccc
Q 003207 654 KDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKIPL 733 (839)
Q Consensus 654 ~~~~~~r~v~ryGy~d~~~~~~~~f~~~l~~~l~~fi~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~p~ 733 (839)
++ |+|||++||||||+++. +++|+++++++|++|++++..+. +. +.+ . .+
T Consensus 559 ~~-g~~rv~~~yGf~e~~~~-~~~l~~~ii~~L~~fi~~~~~~~-~~-~~~-----~----------~~----------- 608 (688)
T TIGR00794 559 TE-GMYRCVIRYGFMDTPNE-PKELAAHIVNSIVEFVEHECGFN-LN-NLE-----E----------LS----------- 608 (688)
T ss_pred CC-CEEEEEEEecCCcCCCc-HHHHHHHHHHHHHHHHHHHhhhc-cc-ccc-----c----------cc-----------
Confidence 54 89999999999999999 99999999999999999876311 00 000 0 00
Q ss_pred ccccccccCCCCCccccCCCCCCcccccCCCCCHHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHHHH
Q 003207 734 MHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAFLR 813 (839)
Q Consensus 734 ~~~~~~~~~e~~~~~s~~~~~~~~r~~~~~~~~~~~e~~~l~~a~e~gvvy~lG~~~V~a~k~S~~~KKi~i~~~y~fLr 813 (839)
+ .+ .+...++|++.+++++|+|++|++||+++++++++++.||..+|++|+||+
T Consensus 609 ---------~----~~-------------~~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~~~I~~lf~~l~ 662 (688)
T TIGR00794 609 ---------D----KR-------------CRMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRKIRVNHVFLFIR 662 (688)
T ss_pred ---------c----cc-------------cccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHHHHHHHHHHHHH
Confidence 0 00 001257888889999999999999999999999999778755599999999
Q ss_pred HhccccccccccCCCCEEEEeeEEEC
Q 003207 814 RNCRAGAANMSVPHMNILQVGMTYMV 839 (839)
Q Consensus 814 rN~r~~~~~l~IP~~rlveVG~~yeI 839 (839)
||||++.++|+||+||++||||+|||
T Consensus 663 rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 663 RNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred HhccChhhheeCChhhEEEEeeEEEC
Confidence 99999999999999999999999997
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=4.4e-214 Score=1796.39 Aligned_cols=610 Identities=33% Similarity=0.606 Sum_probs=583.4
Q ss_pred HHHHhhcceeecccCcchHHHHHHhhcc-CCC-CCccceehhHHHHHHHHHHhhhheeeEEEEEecCCCCChHHHHHHHH
Q 003207 94 ALAFQTLGVVYGDMGTSPLYVYSDVFSK-VQI-ETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLI 171 (839)
Q Consensus 94 ~La~~alGVVyGDIGTSPLYv~~~~F~~-~~~-~~~~dvlGvLSLIfWtLtLiv~iKYv~ivLrAdn~GEGGtfALysLi 171 (839)
.++++|||||||||||||||||+++|.+ ++. +++|||+|+||||||||||++++|||++||||||||||||||||||+
T Consensus 11 ~l~l~aLGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~livtiKYv~ivlrADn~GEGGi~AL~aL~ 90 (622)
T PRK10745 11 AITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAGEGGILTLMSLA 90 (622)
T ss_pred HHHHhhcceEecCCCCChHHHHHHHhccCCCCCCChhHeehhhHHHHHHHHHHHHHHhheEEEecCCCCCchHHHHHHHH
Confidence 3789999999999999999999999965 344 79999999999999999999999999999999999999999999999
Q ss_pred hhhccccCCCCCCCccchhhccccCCCChhhHHHHHHHHHHhhcchhHHHHHHHHHhhhhhhhcccccccchhhhhhccc
Q 003207 172 SRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSG 251 (839)
Q Consensus 172 ~r~~k~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~ik~~le~~~~~~~~l~~l~l~G~am~igDGviTPAISVLSAVeG 251 (839)
+|+.+ ++.|.+++++|++|+||+||||+|||||||||||||
T Consensus 91 ~~~~~---------------------------------------~~~~~~l~~lgl~Gaal~~gDgvITPAISVLSAVEG 131 (622)
T PRK10745 91 GRNTS---------------------------------------ARTTSMLVIMGLIGGSFFYGEVVITPAISVMSAIEG 131 (622)
T ss_pred hhhcc---------------------------------------cchhHHHHHHHHHHHHHHhhccccchhHHHHHHhhc
Confidence 87652 244557889999999999999999999999999999
Q ss_pred ccccccCCCCceehhhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcccceecCHHHHHHHHHh
Q 003207 252 LQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKK 331 (839)
Q Consensus 252 L~v~~p~l~~~~Vv~isv~ILv~LF~iQr~GT~kVG~~FgPImllWF~~l~~iGiynI~~~~p~Vl~AlnP~ya~~ff~~ 331 (839)
|++.+|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ ||+||+|+||+|+++||.+
T Consensus 132 L~v~~p~l~-~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP~ya~~f~~~ 209 (622)
T PRK10745 132 LEIVAPQLD-TYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNPMWAVHFFLE 209 (622)
T ss_pred ccccCCCCC-CccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCHHHHHHHHHh
Confidence 999999996 79999999999999999999999999999999999999999999999998 7999999999999999999
Q ss_pred cCcchhhhhhhhHHHhhchhhhhcCCCCCCccchhhhhHHhHHHHHHHhhcchhhHhhcCCCcccCcccccccCcchHHH
Q 003207 332 NGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPV 411 (839)
Q Consensus 332 n~~~g~~~LG~VvL~iTGaEALyADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~~iP~~~~wP~ 411 (839)
||..||.+||+|+||+|||||||||||||||+|||+||+++|||||+|||+||||+|++||++.+||||+++|+|++||+
T Consensus 210 ~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~ 289 (622)
T PRK10745 210 YKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLLAPDWALIPL 289 (622)
T ss_pred CCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHhCChhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhheeeEEeCChhhhhhhhhc
Q 003207 412 FVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGI 491 (839)
Q Consensus 412 ~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kIvhTS~~~~GQIYIP~VNwlLmi~~i~vv~~F~~S~~l~~AYGi 491 (839)
+++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||+|++||+|||+
T Consensus 290 viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS~~La~AYGi 369 (622)
T PRK10745 290 LILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHSSNLAAAYGI 369 (622)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCchHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhcccCCCcHHHHHHHHhHhhhhhhhhhHHHHHH
Q 003207 492 AEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYR 571 (839)
Q Consensus 492 AV~~vM~iTT~L~~~vm~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pL~ia~v~~~iM~tW~~G~~~~~~ 571 (839)
||++||+|||+|+++|++.+|||+++++++++++|+.+|++||+||+.||+||||+||++|++++++|+||++||+++++
T Consensus 370 AVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW~~G~~~~~~ 449 (622)
T PRK10745 370 AVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTWKSERFRLLR 449 (622)
T ss_pred hheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEe
Q 003207 572 SEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRV 651 (839)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~RvpG~avf~t~~~~gvP~~~~h~l~~~~~lH~~vvfv~v~~~~vP~V~~~eR~~v~~~ 651 (839)
++.++++|+++|++.+++.++.||||+|+|||+..+++|+++.||+||||++||++||+||+++|+|+||++||++++++
T Consensus 450 ~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~~eR~~v~~l 529 (622)
T PRK10745 450 RMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHNVRRVQIEQL 529 (622)
T ss_pred HHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCcccEEEEEEE
Confidence 99999999999999998778789999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHHhHHHHHhhhcccCccccccccCCCCCCCCCCCcccccc
Q 003207 652 GPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEELKI 731 (839)
Q Consensus 652 ~~~~~~~~r~v~ryGy~d~~~~~~~~f~~~l~~~l~~fi~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~ 731 (839)
++ ++|||++||||||+||. ++ .++ .|+.
T Consensus 530 ~~---g~~rv~~~yGf~e~~~i-~~---------------------~L~-~~~~-------------------------- 557 (622)
T PRK10745 530 SP---TFWRVVASYGWRETPNV-EE---------------------VFH-RCGL-------------------------- 557 (622)
T ss_pred CC---CEEEEEEEecCCCCCCH-HH---------------------HHH-HHHh--------------------------
Confidence 97 79999999999999998 76 343 2210
Q ss_pred ccccccccccCCCCCccccCCCCCCcccccCCCCCHHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHHHHH
Q 003207 732 PLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYFYAF 811 (839)
Q Consensus 732 p~~~~~~~~~~e~~~~~s~~~~~~~~r~~~~~~~~~~~e~~~l~~a~e~gvvy~lG~~~V~a~k~S~~~KKi~i~~~y~f 811 (839)
++++.|+ ++++||+||++++++++++|.+ |++++|+|
T Consensus 558 ---------------------------------~g~~~~~--------~~~s~fl~r~~l~~~~~~~m~~--wr~~lF~~ 594 (622)
T PRK10745 558 ---------------------------------EGLSCRM--------METSFFMSHESLILGKRPWYLR--LRGKLFLL 594 (622)
T ss_pred ---------------------------------CCCCCCc--------cceEEEEeeEEEEeCCCCCcHH--HHHHHHHH
Confidence 1122334 7999999999999999999999 99999999
Q ss_pred HHHhccccccccccCCCCEEEEeeEEEC
Q 003207 812 LRRNCRAGAANMSVPHMNILQVGMTYMV 839 (839)
Q Consensus 812 LrrN~r~~~~~l~IP~~rlveVG~~yeI 839 (839)
|.||+++++++|+||+||++|+|+++||
T Consensus 595 m~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 595 LQRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred HHHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 9999999999999999999999999996
No 7
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-201 Score=1655.06 Aligned_cols=612 Identities=37% Similarity=0.658 Sum_probs=591.8
Q ss_pred HHHHHHHhhcceeecccCcchHHHHHHhhcc-CCC-CCccceehhHHHHHHHHHHhhhheeeEEEEEecCCCCChHHHHH
Q 003207 91 HTLALAFQTLGVVYGDMGTSPLYVYSDVFSK-VQI-ETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALY 168 (839)
Q Consensus 91 ~~l~La~~alGVVyGDIGTSPLYv~~~~F~~-~~~-~~~~dvlGvLSLIfWtLtLiv~iKYv~ivLrAdn~GEGGtfALy 168 (839)
.+..++++|+|||||||||||||+++++|.. ++. .++++|+|++||||||||+|||+|||++||||||||||||++|+
T Consensus 14 ~~~~l~lgAiGVVyGDIGTSPLYa~~e~~~~~~~~~v~~~~VlGvlSLi~WtLtlIVTiKYv~~vlRADN~GEGGilsL~ 93 (627)
T COG3158 14 STKALTLGAIGVVYGDIGTSPLYALREALSGQGGLGVSRDEVLGVLSLIIWTLTLIVTIKYVLFVLRADNNGEGGILSLM 93 (627)
T ss_pred cchhHhhheeeeEeccCCCChHHHHHHHhccCCCCCCCcceeeeHHHHHHHHHHHHHHHhhheeEEecCCCCCchhhhHH
Confidence 3566889999999999999999999999975 443 68999999999999999999999999999999999999999999
Q ss_pred HHHhhhccccCCCCCCCccchhhccccCCCChhhHHHHHHHHHHhhcchhHHHHHHHHHhhhhhhhcccccccchhhhhh
Q 003207 169 SLISRYAKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSA 248 (839)
Q Consensus 169 sLi~r~~k~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~ik~~le~~~~~~~~l~~l~l~G~am~igDGviTPAISVLSA 248 (839)
+|++|.++ +...++.++|++|+|+++|||+||||||||||
T Consensus 94 aL~~~~~~----------------------------------------~~~~~l~~~g~iGaalf~GD~vITPAiSVlSA 133 (627)
T COG3158 94 ALARRAAP----------------------------------------RRTALLIILGLIGAALFYGDAVITPAISVLSA 133 (627)
T ss_pred HHHHhhcC----------------------------------------CCchhhhhHHHHhHHHHhcccccchhHHHHHH
Confidence 99998762 44568899999999999999999999999999
Q ss_pred cccccccccCCCCceehhhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcccceecCHHHHHHH
Q 003207 249 VSGLQGEIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLF 328 (839)
Q Consensus 249 VeGL~v~~p~l~~~~Vv~isv~ILv~LF~iQr~GT~kVG~~FgPImllWF~~l~~iGiynI~~~~p~Vl~AlnP~ya~~f 328 (839)
||||++.+|.++ ++|+|||++||++||++||+||++||++|||||++||+++|+.|++||.+ ||+||+|+||+||++|
T Consensus 134 vEGL~iv~p~~~-~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~f 211 (627)
T COG3158 134 VEGLEIVTPALD-PYVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHF 211 (627)
T ss_pred hccccccCcccc-CccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHH
Confidence 999999999997 89999999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred HHhcCcchhhhhhhhHHHhhchhhhhcCCCCCCccchhhhhHHhHHHHHHHhhcchhhHhhcCCCcccCcccccccCcch
Q 003207 329 FKKNGKDAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLF 408 (839)
Q Consensus 329 f~~n~~~g~~~LG~VvL~iTGaEALyADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~~iP~~~~ 408 (839)
+.++|..||++||+||||+||+||||||||||||+|||.||+++|+|||+|||+||||++++||++..||||.++|+|++
T Consensus 212 l~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~al 291 (627)
T COG3158 212 LLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWAL 291 (627)
T ss_pred HHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhheeeEEeCChhhhhhh
Q 003207 409 WPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANA 488 (839)
Q Consensus 409 wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kIvhTS~~~~GQIYIP~VNwlLmi~~i~vv~~F~~S~~l~~A 488 (839)
|||++|||+||||||||+|||+||++|||++||++|||||.|||+++.||||||.|||+|++++++++++||+|++||+|
T Consensus 292 iP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaA 371 (627)
T COG3158 292 IPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAA 371 (627)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhchhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhcccCCCcHHHHHHHHhHhhhhhhhhhHHH
Q 003207 489 YGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVL 568 (839)
Q Consensus 489 YGiAV~~vM~iTT~L~~~vm~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pL~ia~v~~~iM~tW~~G~~~ 568 (839)
||||||++|+|||+|++.+|+..|||+.+++.++.++|+.+|..||+||+.|+.||||+|+++|++++++|+||++|+++
T Consensus 372 YGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~ 451 (627)
T COG3158 372 YGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQI 451 (627)
T ss_pred hChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEE
Q 003207 569 KYRSEVREKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLF 648 (839)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~RvpG~avf~t~~~~gvP~~~~h~l~~~~~lH~~vvfv~v~~~~vP~V~~~eR~~v 648 (839)
.+++..++++|+|.|++.+++.++.||||||+|+|...+-+|.+++|++|||+++||++||++|++.++|+|+++||+++
T Consensus 452 l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~v 531 (627)
T COG3158 452 LFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKV 531 (627)
T ss_pred HHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCcEEEEEEEEeeccccccChhHHHHHHHHHHHHHHHHHhHHHHHhhhcccCccccccccCCCCCCCCCCCccc
Q 003207 649 RRVGPKDYHMFRCVTRYGYKDVRKEDHHVFEQLLVASLEKFLRKEAQDLALERNLLESDLDSVSVASRDPEASGSYGTEE 728 (839)
Q Consensus 649 ~~~~~~~~~~~r~v~ryGy~d~~~~~~~~f~~~l~~~l~~fi~~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 728 (839)
+++++ +++|+.++|||||+||+ ++ ++. .|++
T Consensus 532 e~l~~---~f~rV~l~~Gfme~pnv-p~---------------------~l~-~~~~----------------------- 562 (627)
T COG3158 532 EQLSD---DFVRVVLHFGFMETPNV-PR---------------------ALR-LCRK----------------------- 562 (627)
T ss_pred eeccC---ceEEEEEEeeccCCCCH-HH---------------------HHH-HHhh-----------------------
Confidence 99998 69999999999999999 77 555 3431
Q ss_pred cccccccccccccCCCCCccccCCCCCCcccccCCCCCHHHhHHHHHHhHhcCcEEEEeeceEEecCCcchhHHHHHHHH
Q 003207 729 LKIPLMHERRFDESGTSASEETTSALPSSVMALDEDPSLEYELSALREAIDSGFTYLLAHGDVRAKKKSFFLKKLVINYF 808 (839)
Q Consensus 729 ~~~p~~~~~~~~~~e~~~~~s~~~~~~~~r~~~~~~~~~~~e~~~l~~a~e~gvvy~lG~~~V~a~k~S~~~KKi~i~~~ 808 (839)
+|+..|+ +.++||+||++++++++++|.+ |++++
T Consensus 563 ------------------------------------~G~~f~i--------m~tsFfl~re~l~~~~~~g~~~--w~~~l 596 (627)
T COG3158 563 ------------------------------------KGLKFDI--------METSFFLSRESLIASKNSGMPR--WRDRL 596 (627)
T ss_pred ------------------------------------cCceecc--------cceEEEEEeeeeecCCCCCchH--HHHHH
Confidence 2445677 8999999999999999999999 99999
Q ss_pred HHHHHHhccccccccccCCCCEEEEeeEEEC
Q 003207 809 YAFLRRNCRAGAANMSVPHMNILQVGMTYMV 839 (839)
Q Consensus 809 y~fLrrN~r~~~~~l~IP~~rlveVG~~yeI 839 (839)
|..|.||+.+++++|+||+|||+|+|.++||
T Consensus 597 fi~l~r~aa~~~~~F~lp~~rvvElGtqveI 627 (627)
T COG3158 597 FIALARNAASPTDYFKLPPNRVVELGTQVEI 627 (627)
T ss_pred HHHHHHhcCCHHHhhCCCCCcEEEeeeeeeC
Confidence 9999999999999999999999999999987
No 8
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=1.8e-198 Score=1656.89 Aligned_cols=533 Identities=47% Similarity=0.832 Sum_probs=520.1
Q ss_pred HHhhcceeecccCcchHHHHHHhhcc-CCCCCccceehhHHHHHHHHHHhhhheeeEEEEEecCCCCChHHHHHHHHhhh
Q 003207 96 AFQTLGVVYGDMGTSPLYVYSDVFSK-VQIETEIDVLGALSLVMYTITLIPLAKYVFVVLKANDNGEGGTFALYSLISRY 174 (839)
Q Consensus 96 a~~alGVVyGDIGTSPLYv~~~~F~~-~~~~~~~dvlGvLSLIfWtLtLiv~iKYv~ivLrAdn~GEGGtfALysLi~r~ 174 (839)
|++|||||||||||||||||+++|.+ +..+++|||+|+||||||||||++++|||++||||||||||||||||||+||.
T Consensus 1 a~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~vlG~lSlIfWtL~liv~iKYv~ivlradn~GEGGi~aL~sL~~~~ 80 (534)
T PF02705_consen 1 ALGALGVVYGDIGTSPLYVFKEIFGSHGLPPTEENVLGVLSLIFWTLTLIVTIKYVLIVLRADNNGEGGIFALYSLIRRF 80 (534)
T ss_pred CceeEEEEeCCCCCCHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHHHHheEEEEEEeCCCCChhHHHHHHHHHHh
Confidence 68999999999999999999999933 23489999999999999999999999999999999999999999999999964
Q ss_pred ccccCCCCCCCccchhhccccCCCChhhHHHHHHHHHHhhcchhHHHHHHHHHhhhhhhhcccccccchhhhhhcccccc
Q 003207 175 AKVNMLPNRQPADEQISSFRLKLPTPELERALQLKDILERTSSLKTLLLLLVLMGTSLIIGDGILTPAISVMSAVSGLQG 254 (839)
Q Consensus 175 ~k~~~ip~~~~~d~~~s~~~~~~~~~~~~~~~~ik~~le~~~~~~~~l~~l~l~G~am~igDGviTPAISVLSAVeGL~v 254 (839)
. |++++.|.+++++|++|+||+||||+||||||||||||||++
T Consensus 81 ~-------------------------------------~~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~v 123 (534)
T PF02705_consen 81 L-------------------------------------KSSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLEV 123 (534)
T ss_pred h-------------------------------------ccchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhhc
Confidence 3 235677778899999999999999999999999999999999
Q ss_pred cccCCCCceehhhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcccceecCHHHHHHHHHhcCc
Q 003207 255 EIHGFGESALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGK 334 (839)
Q Consensus 255 ~~p~l~~~~Vv~isv~ILv~LF~iQr~GT~kVG~~FgPImllWF~~l~~iGiynI~~~~p~Vl~AlnP~ya~~ff~~n~~ 334 (839)
.+|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++| |+||+|+||+|+++||.+||+
T Consensus 124 ~~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~~-p~Vl~A~nP~yai~f~~~~~~ 201 (534)
T PF02705_consen 124 ATPSLE-PYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQH-PEVLKALNPYYAIRFFIRNGW 201 (534)
T ss_pred cCCCCc-ceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhC-HHHHHHhCHHHHHHHHHHcCC
Confidence 999998 899999999999999999999999999999999999999999999999995 999999999999999999999
Q ss_pred chhhhhhhhHHHhhchhhhhcCCCCCCccchhhhhHHhHHHHHHHhhcchhhHhhcCCCcccCcccccccCcchHHHHHH
Q 003207 335 DAWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDSANRIFYDSVPDSLFWPVFVL 414 (839)
Q Consensus 335 ~g~~~LG~VvL~iTGaEALyADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~~p~~~~npFy~~iP~~~~wP~~vl 414 (839)
.||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||+++|+|++||++++
T Consensus 202 ~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~il 281 (534)
T PF02705_consen 202 IGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVIL 281 (534)
T ss_pred chhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHhhhhhHHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhheeeEEeCChhhhhhhhhchhh
Q 003207 415 AALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEV 494 (839)
Q Consensus 415 AtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kIvhTS~~~~GQIYIP~VNwlLmi~~i~vv~~F~~S~~l~~AYGiAV~ 494 (839)
||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||+
T Consensus 282 AtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt 361 (534)
T PF02705_consen 282 ATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVT 361 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhHhcccCCCcHHHHHHHHhHhhhhhhhhhHHHHHHHHH
Q 003207 495 GVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFASVFLCVMYIWNYGSVLKYRSEV 574 (839)
Q Consensus 495 ~vM~iTT~L~~~vm~~vw~~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pL~ia~v~~~iM~tW~~G~~~~~~~~~ 574 (839)
+||++||+|+++||+.+||||++++++|+++|+.+|++||+||+.||+||||+||++|++++++|+||+|||++++++++
T Consensus 362 ~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~ 441 (534)
T PF02705_consen 362 GTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFER 441 (534)
T ss_pred HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCChHHHHHhcCCCCCcccceeEEEeecCCCCchhHHHHHhhhcCccceEEEEEEEEEecccccCCCceEEEEEecCC
Q 003207 575 REKISMDFLLDLGSTLGTVRVPGIGLLYNELVQGIPSIFGQFLLSLPAIHSTIVFVCIKYVPVPMVRLEERFLFRRVGPK 654 (839)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~RvpG~avf~t~~~~gvP~~~~h~l~~~~~lH~~vvfv~v~~~~vP~V~~~eR~~v~~~~~~ 654 (839)
++++++++++++.++.++.|+||+|+|+|+..+++|+++.|+++||+++||+++|++|+++|+|+||++||++++++++
T Consensus 442 ~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~- 520 (534)
T PF02705_consen 442 ENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGP- 520 (534)
T ss_pred hcCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecC-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999996
Q ss_pred CCcEEEEEEEEeecc
Q 003207 655 DYHMFRCVTRYGYKD 669 (839)
Q Consensus 655 ~~~~~r~v~ryGy~d 669 (839)
+++|||++||||||
T Consensus 521 -~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 521 -DGFYRVTLRYGFME 534 (534)
T ss_pred -CCEEEEEEEecCCC
Confidence 38999999999998
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=94.64 E-value=0.25 Score=57.07 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=50.8
Q ss_pred ehhhHHHHHHHHHHhhhccccccccc---hhhHHHHHHHHHHhhhhhhccccCcccceecCHHHHHHHHHhcCcchhh-h
Q 003207 264 LVIVSIIILVALFSIQRFGTGKVGFM---FAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWS-A 339 (839)
Q Consensus 264 Vv~isv~ILv~LF~iQr~GT~kVG~~---FgPImllWF~~l~~iGiynI~~~~p~Vl~AlnP~ya~~ff~~n~~~g~~-~ 339 (839)
...++++++++++.+.-+|....+++ +.-+.++=++.+.+.|++.+.+.++. ..+|...+.-. .++..+|. .
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~-~~~~~~~~~a 240 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGT-ETSAGGIVLA 240 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCC-CCcHHHHHHH
Confidence 45678888888999999997666543 33222222233334555544321111 12222111000 02233444 5
Q ss_pred hhhhHHHhhchhhhhcCCC--CCCccchhhhh
Q 003207 340 LGGCVLCITGAEAMFADLG--HFSVKAIQIAF 369 (839)
Q Consensus 340 LG~VvL~iTGaEALyADlG--HFg~~~Iqiaw 369 (839)
+..++.+.+|-|+.=.--| +-.+|.|..|-
T Consensus 241 ~~~~~~af~G~e~~~~~a~E~knP~r~iPrAi 272 (501)
T TIGR00911 241 FYSGIWAYGGWNYLNFVTEEVKNPYRTLPIAI 272 (501)
T ss_pred HHHHHHHHHhHHHHhhhHHHhcCchhhhHHHH
Confidence 7778888999886533222 23345554443
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=93.12 E-value=2.5 Score=47.33 Aligned_cols=179 Identities=16% Similarity=0.125 Sum_probs=103.4
Q ss_pred eehhhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhccccCcccceecCHHHHHHHHHhcCcchhhhhhh
Q 003207 263 ALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGG 342 (839)
Q Consensus 263 ~Vv~isv~ILv~LF~iQr~GT~kVG~~FgPImllWF~~l~~iGiynI~~~~p~Vl~AlnP~ya~~ff~~n~~~g~~~LG~ 342 (839)
....++++++++++.++-+|....++...-..++=++.+..+.+..+...+......+++... .......-...++.
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 209 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP---GGGSFGGILAAILL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc---ccchHHHHHHHHHH
Confidence 467889999999999999999988886665555555555555555444433222222221111 00000123455667
Q ss_pred hHHHhhchhhh--hcC-CCCCCccchhhhhHHhHHHHHHHhhcchhhHhhcCCC-ccc-----Ccccc---ccc-CcchH
Q 003207 343 CVLCITGAEAM--FAD-LGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPD-SAN-----RIFYD---SVP-DSLFW 409 (839)
Q Consensus 343 VvL~iTGaEAL--yAD-lGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~~p~-~~~-----npFy~---~iP-~~~~w 409 (839)
++.+.+|-|+. +|+ +=+ .+|.|-.+-..-+.-+.++-.+++-+....-|. +.. +|+.. ... .+..+
T Consensus 210 ~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~ 288 (466)
T COG0531 210 AFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGAI 288 (466)
T ss_pred HHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHHH
Confidence 78999998864 342 333 555666665554444444444444444333332 111 34432 222 35666
Q ss_pred HHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCc
Q 003207 410 PVFVLAALAAMIASQAMISATFSCIKQAMALGCFPR 445 (839)
Q Consensus 410 P~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR 445 (839)
-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 289 ~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 289 IIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 666666666666667777777777777788999999
No 11
>TIGR00909 2A0306 amino acid transporter.
Probab=90.29 E-value=5.4 Score=44.84 Aligned_cols=212 Identities=16% Similarity=0.160 Sum_probs=101.6
Q ss_pred ehhhHHHHHHHHHHhhhcccccccc---chhhHHHHHHHHHHhhhhhhccccCcccceecCHHHHHHHHHhcCcchh-hh
Q 003207 264 LVIVSIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDAW-SA 339 (839)
Q Consensus 264 Vv~isv~ILv~LF~iQr~GT~kVG~---~FgPImllWF~~l~~iGiynI~~~~p~Vl~AlnP~ya~~ff~~n~~~g~-~~ 339 (839)
+..+++++++++..+..+|....++ .+..+.++=++.+.+.|+.+. ++.-+..+.|. +..+| ..
T Consensus 133 ~~~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~ 200 (429)
T TIGR00909 133 FNLPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAA 200 (429)
T ss_pred ccHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHH
Confidence 3345677888888899999766554 666665554444445555433 22222222221 22222 22
Q ss_pred hhhhHHHhhchhhhhc--CCCCCCccchhhhhHHhHHHHHHHhhcchhhHhhcC-C-C---cccCccc----ccccCcch
Q 003207 340 LGGCVLCITGAEAMFA--DLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKY-P-D---SANRIFY----DSVPDSLF 408 (839)
Q Consensus 340 LG~VvL~iTGaEALyA--DlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~~-p-~---~~~npFy----~~iP~~~~ 408 (839)
+...+.+.+|-|+.-. +-=+-.+|.+..|-..-+.-+. +.|+.-....... | + ...+|+. +...++.-
T Consensus 201 ~~~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~~~~-v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (429)
T TIGR00909 201 TALVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLIVVT-LLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGG 279 (429)
T ss_pred HHHHHHHHhhHHHHHhhHHhccCccccccHHHHHHHHHHH-HHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHH
Confidence 4456677778887643 3334455667766554222222 2244433322221 1 1 1223332 22233444
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhheeeEEeCChhhhhhh
Q 003207 409 WPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANA 488 (839)
Q Consensus 409 wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kIvhTS~~~~GQIYIP~VNwlLmi~~i~vv~~F~~S~~l~~A 488 (839)
+-+.+.+.++.+.+..+.+.+.=-++...-+.|.+|+. .-++++|. | .|..--++..+...+...+.+.+.+.+.
T Consensus 280 ~~~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~-~~~~~~~~-~---~P~~a~~~~~~i~~~~~~~~~~~~l~~~ 354 (429)
T TIGR00909 280 LILTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS-LSKVHPKT-G---TPHMSIIIFSLTAALLASLVPLEGLAEL 354 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH-HHHcCCCC-C---CcHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 44444444544455555555555555555678999973 22333221 1 6765333333322222334555555554
Q ss_pred hhchh
Q 003207 489 YGIAE 493 (839)
Q Consensus 489 YGiAV 493 (839)
.+++.
T Consensus 355 ~~~~~ 359 (429)
T TIGR00909 355 TSIGT 359 (429)
T ss_pred HHHHH
Confidence 44433
No 12
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=88.92 E-value=4.2 Score=45.46 Aligned_cols=222 Identities=14% Similarity=0.170 Sum_probs=126.3
Q ss_pred ehhhHHHHHHHHHHhhhccccccccc---hhhHHH-HHHHHHHhhhhhhccccCccc-----ceecCHHHHHHHHHhcCc
Q 003207 264 LVIVSIIILVALFSIQRFGTGKVGFM---FAPVLA-LWFFSLGSIGLYNLVKYDISV-----VRAFNPIYIYLFFKKNGK 334 (839)
Q Consensus 264 Vv~isv~ILv~LF~iQr~GT~kVG~~---FgPIml-lWF~~l~~iGiynI~~~~p~V-----l~AlnP~ya~~ff~~n~~ 334 (839)
...++++++++.+.+.-+|....+++ ++=+.+ .-++.+.+.|++...++ ..- ....+|. +.
T Consensus 118 ~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~ 187 (426)
T PF13520_consen 118 QFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSFS-GFNSLSFSLSTFFPS---------GW 187 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCC-HHH----SHSCSSCS---------SS
T ss_pred heeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeeccc-ccccccccccccCCc---------cc
Confidence 45678888889999999998776654 333333 34455556676655431 111 1122222 11
Q ss_pred c-hhhhhhhhHHHhhchhhhhcCCCCCCccchhhhhHHhHHHHHHHhhcchhhHhhcCCCc----ccC------ccccc-
Q 003207 335 D-AWSALGGCVLCITGAEAMFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYPDS----ANR------IFYDS- 402 (839)
Q Consensus 335 ~-g~~~LG~VvL~iTGaEALyADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~~p~~----~~n------pFy~~- 402 (839)
. -+..+...+.+.+|-|+.=.=.+-..+|.+..+-..-+.-+.++.-+..-++...-|.+ .+| .+++.
T Consensus 188 ~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (426)
T PF13520_consen 188 PGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAV 267 (426)
T ss_dssp SHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHH
T ss_pred cchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhccc
Confidence 1 25566778888889887654444455577777665544444444334444444443321 112 22232
Q ss_pred ccCcchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCceeEEecCCccCCceeechhHHHHHHHhh-eee--EEe
Q 003207 403 VPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFLMIMCV-VVV--SIF 479 (839)
Q Consensus 403 iP~~~~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kIvhTS~~~~GQIYIP~VNwlLmi~~i-~vv--~~F 479 (839)
-.++..+.+.+++.++++-+-.+.+.+.--++.+.-+-|.+|+ +..|++| .| .|..-.+++..+. ++. ..|
T Consensus 268 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~ 341 (426)
T PF13520_consen 268 GGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVNK--FG---TPYNAIILVAVISSILLLLFLF 341 (426)
T ss_dssp HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTSS--SS---SCHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhccc--cC---CceeeehhhhHHHHHHHHHHHh
Confidence 2467888888888888888777777777777788888899993 2333332 22 3655544444433 222 223
Q ss_pred ---CChhhhhhhhhchhhhHHHHHH
Q 003207 480 ---QSTTDIANAYGIAEVGVMLVSS 501 (839)
Q Consensus 480 ---~~S~~l~~AYGiAV~~vM~iTT 501 (839)
++.+.+.+.+.+......+++.
T Consensus 342 ~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (426)
T PF13520_consen 342 IPQSSFDILVSLSSVGYLISYILVI 366 (426)
T ss_dssp SSSSHHHHHHHHHHHHTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2335667766666666666653
No 13
>TIGR00930 2a30 K-Cl cotransporter.
Probab=88.66 E-value=32 Score=44.02 Aligned_cols=25 Identities=20% Similarity=0.179 Sum_probs=18.6
Q ss_pred ehhhHHHHHHHHHHhhhcccccccc
Q 003207 264 LVIVSIIILVALFSIQRFGTGKVGF 288 (839)
Q Consensus 264 Vv~isv~ILv~LF~iQr~GT~kVG~ 288 (839)
+-.++++++++++.+--+|....++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak 227 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK 227 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH
Confidence 4557778888888888899865544
No 14
>PRK15049 L-asparagine permease; Provisional
Probab=87.49 E-value=15 Score=43.00 Aligned_cols=23 Identities=9% Similarity=0.118 Sum_probs=17.1
Q ss_pred hhHHHHHHHHHHhhhcccccccc
Q 003207 266 IVSIIILVALFSIQRFGTGKVGF 288 (839)
Q Consensus 266 ~isv~ILv~LF~iQr~GT~kVG~ 288 (839)
.+++++++++..+.-+|....++
T Consensus 146 ~~~~~~~~l~~~iN~~gvk~~~~ 168 (499)
T PRK15049 146 VFALAALTIVGTMNMIGVKWFAE 168 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34677777888888888776665
No 15
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=87.03 E-value=20 Score=41.27 Aligned_cols=58 Identities=19% Similarity=0.181 Sum_probs=31.1
Q ss_pred chhhhhhhhHHHhhchhh--hhcCCCCCCccchhhhhHHhHHHHHHHhhcchhhHhhcCC
Q 003207 335 DAWSALGGCVLCITGAEA--MFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYP 392 (839)
Q Consensus 335 ~g~~~LG~VvL~iTGaEA--LyADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~~p 392 (839)
.++...++++.+.+|-|. .+|+==+-.+|.+-.|-..-+.=+.++-.+++-+....-|
T Consensus 195 ~~~~~~~~~~~af~G~e~~~~~a~E~knP~r~iPrAi~~~~~~~~~~y~l~~~~~~~~~~ 254 (474)
T TIGR03813 195 DNVVLAASIFLFYAGMEMNAVHVKDVDNPDKNYPIAILIAALGTVLIFVLGTLAIAFIIP 254 (474)
T ss_pred ccHHHHHHHHHHHhchhHhHHHHHhccCcccchhHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 344444556678888874 3444445556666666655444444444444444444333
No 16
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=86.97 E-value=14 Score=42.54 Aligned_cols=24 Identities=21% Similarity=0.477 Sum_probs=17.8
Q ss_pred CcHHHHHHHHhHhhhhhhhhhHHH
Q 003207 545 GWLPLAFASVFLCVMYIWNYGSVL 568 (839)
Q Consensus 545 GW~pL~ia~v~~~iM~tW~~G~~~ 568 (839)
-|.++++++++.+.+..|....++
T Consensus 454 ny~~~~~~~~~~~~~~~~~~~~r~ 477 (482)
T TIGR00907 454 NYAVVVFAGVLAISLVYWKYKGRK 477 (482)
T ss_pred ChHhHHHHHHHHHHHHHheEecee
Confidence 499999988888888777654333
No 17
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=85.74 E-value=29 Score=39.66 Aligned_cols=23 Identities=17% Similarity=0.177 Sum_probs=17.3
Q ss_pred hHHHHHHHHHHhhhccccccccc
Q 003207 267 VSIIILVALFSIQRFGTGKVGFM 289 (839)
Q Consensus 267 isv~ILv~LF~iQr~GT~kVG~~ 289 (839)
++++++.++..+.-+|+...+++
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 45566677888999999877664
No 18
>PRK10655 potE putrescine transporter; Provisional
Probab=84.28 E-value=34 Score=38.84 Aligned_cols=42 Identities=17% Similarity=0.091 Sum_probs=24.5
Q ss_pred hhHHHHHHHHHHhhhccccccccc---hhhHHHHHHHHHHhhhhh
Q 003207 266 IVSIIILVALFSIQRFGTGKVGFM---FAPVLALWFFSLGSIGLY 307 (839)
Q Consensus 266 ~isv~ILv~LF~iQr~GT~kVG~~---FgPImllWF~~l~~iGiy 307 (839)
.+++++++++..+.-+|+...+++ ..-.+++-++.+...|++
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~ 169 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWF 169 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666777888999998766654 222333334444444544
No 19
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=83.16 E-value=27 Score=39.70 Aligned_cols=24 Identities=13% Similarity=0.505 Sum_probs=17.4
Q ss_pred hhHHHHHHHHHHhhhccccccccc
Q 003207 266 IVSIIILVALFSIQRFGTGKVGFM 289 (839)
Q Consensus 266 ~isv~ILv~LF~iQr~GT~kVG~~ 289 (839)
.+++++++++..+.-+|.+..+++
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 455666677778888898777764
No 20
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=82.30 E-value=55 Score=39.14 Aligned_cols=215 Identities=15% Similarity=0.210 Sum_probs=92.1
Q ss_pred ehhhHHHHHHHHHHhhhcccccccc---chhhHHHHHHHHHHhhhhhhccccCcccceecCHHHHHHHHHhcCcch-hhh
Q 003207 264 LVIVSIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLFFKKNGKDA-WSA 339 (839)
Q Consensus 264 Vv~isv~ILv~LF~iQr~GT~kVG~---~FgPImllWF~~l~~iGiynI~~~~p~Vl~AlnP~ya~~ff~~n~~~g-~~~ 339 (839)
...+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+... +++-....++ ..-.-|..++..| +..
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~~---~~~~~~~~~~-~~~~~f~p~g~~g~l~g 236 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTKA---DVANWSITEE-KGAGGFMPYGFTGVLSG 236 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhhC---Cchhcccccc-ccCCCCCCcchHHHHHH
Confidence 3456677777778888899876665 333333333444445555432 2221110000 0000011112222 223
Q ss_pred hhhhHHHhhchhhhhc--CCCCCCccchhhhhHH------hHHHHHHHhhcchhhHhhcCCCcccCcc---ccccc-Ccc
Q 003207 340 LGGCVLCITGAEAMFA--DLGHFSVKAIQIAFTL------VVFPCLLLAYMGQAAYLMKYPDSANRIF---YDSVP-DSL 407 (839)
Q Consensus 340 LG~VvL~iTGaEALyA--DlGHFg~~~Iqiaw~~------~V~PaLlL~Y~GQgA~Ll~~p~~~~npF---y~~iP-~~~ 407 (839)
+..++.+.+|-|+.-. .==+--+|.|-++-.. ++|-...+.+.|.--+-.-++ ++|| ++... ++.
T Consensus 237 ~~~~~faf~Gfd~v~~~aeE~knP~r~iP~aii~sl~i~~vlY~lv~~~l~~~vp~~~l~~---~~p~~~a~~~~g~~~~ 313 (557)
T TIGR00906 237 AATCFFAFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDP---DAPFPVAFEYVGWGPA 313 (557)
T ss_pred HHHHHHHHhhHHHHHHhHHhccCccccccHHHHHHHHHHHHHHHHHHHHHhccccHHHhCc---CcHHHHHHHHcCchHH
Confidence 4456678888887632 1112223334333332 233333333333322221122 2333 12111 222
Q ss_pred hHHHHHHHHHHHHHHHhHHhhhhhHH---HHHHHHcCCCCce-eEEecCCccCCceeechhHHHHHHHhheeeEEeCChh
Q 003207 408 FWPVFVLAALAAMIASQAMISATFSC---IKQAMALGCFPRL-KIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTT 483 (839)
Q Consensus 408 ~wP~~vlAtlAtIIASQA~ISg~FSi---i~Qai~Lg~fPR~-kIvhTS~~~~GQIYIP~VNwlLmi~~i~vv~~F~~S~ 483 (839)
.+ ++.+..+.++.+ ++.+..++. +...-+-|.+|+. .-+|...+ .|...-++...+.++...+.+.+
T Consensus 314 ~~-ii~~~~~~~~~~--sl~~~~~~~sRil~amarDGlLP~~fakv~~r~~------tP~~Ail~~~iv~~il~~~~~~~ 384 (557)
T TIGR00906 314 KY-IVAVGALCGMST--SLLGGMFPLPRVIYAMARDGLLFKWLAQINSKTK------TPINATVVSGAIAALMAFLFDLK 384 (557)
T ss_pred HH-HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcCCCccHHHhccCCCCC------CcHHHHHHHHHHHHHHHHHcCHH
Confidence 11 122222222222 234444443 3344467999973 22232222 67766655554444444555667
Q ss_pred hhhhhhhchhh
Q 003207 484 DIANAYGIAEV 494 (839)
Q Consensus 484 ~l~~AYGiAV~ 494 (839)
.+.+...++..
T Consensus 385 ~l~~l~sig~l 395 (557)
T TIGR00906 385 ALVDLLSIGTL 395 (557)
T ss_pred HHHHHHHHHHH
Confidence 77765544443
No 21
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=80.85 E-value=88 Score=36.15 Aligned_cols=45 Identities=7% Similarity=-0.209 Sum_probs=30.6
Q ss_pred cccCcchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCce
Q 003207 402 SVPDSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRL 446 (839)
Q Consensus 402 ~iP~~~~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~ 446 (839)
...++..+-+.+.+.++++-+..+.+.++--+..+.-+-|.+|+.
T Consensus 273 ~~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 273 MVGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred HcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 344555555556666666666667677776777777789999964
No 22
>PRK10249 phenylalanine transporter; Provisional
Probab=80.29 E-value=51 Score=38.03 Aligned_cols=114 Identities=18% Similarity=0.196 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHhhhccccccccc---hhhHHHHHHHHHHhhhhhhccccCcccceecCHHHHHHH--HHhcCcch-hhhh
Q 003207 267 VSIIILVALFSIQRFGTGKVGFM---FAPVLALWFFSLGSIGLYNLVKYDISVVRAFNPIYIYLF--FKKNGKDA-WSAL 340 (839)
Q Consensus 267 isv~ILv~LF~iQr~GT~kVG~~---FgPImllWF~~l~~iGiynI~~~~p~Vl~AlnP~ya~~f--f~~n~~~g-~~~L 340 (839)
+++++++++..+.-+|....|++ +.=+-++..+.+.++|+.-+...++. ...++.+..+. +..++..+ +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGG--EKASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC--CCCChhhccCCCCCCCCcHHHHHHHH
Confidence 45667777788888888766653 23233344444445555433321111 01122111100 01233333 3556
Q ss_pred hhhHHHhhchhhh--hcCCCCCCccchhhhhHHhHHHHHHHhhcc
Q 003207 341 GGCVLCITGAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMG 383 (839)
Q Consensus 341 G~VvL~iTGaEAL--yADlGHFg~~~Iqiaw~~~V~PaLlL~Y~G 383 (839)
..++.+.+|-|.. .|+=-+-.+|.|-.+-... .-...+-|++
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~~~-~~~~~~~y~~ 259 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVNQV-VYRILLFYIG 259 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHHHH-HHHHHHHHHH
Confidence 6677888898865 5665566677776665542 2334444444
No 23
>PRK10746 putative transport protein YifK; Provisional
Probab=80.27 E-value=73 Score=36.93 Aligned_cols=30 Identities=10% Similarity=0.108 Sum_probs=21.5
Q ss_pred cccHHHHHHHHHhhcceeecccCcchHHHHHHhhcc
Q 003207 86 DVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSK 121 (839)
Q Consensus 86 ~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~ 121 (839)
+.+.+....+++++. |||.-+..-+..+..
T Consensus 11 ~L~~~~~~~i~ig~~------IGtGlf~~~g~~l~~ 40 (461)
T PRK10746 11 GLEARHIELIALGGT------IGVGLFMGAASTLKW 40 (461)
T ss_pred cCcHHHHHHHHHHhh------hhhhHHHHhHHHHHh
Confidence 356666666666655 999988888888754
No 24
>PRK10238 aromatic amino acid transporter; Provisional
Probab=79.47 E-value=41 Score=38.76 Aligned_cols=114 Identities=17% Similarity=0.131 Sum_probs=55.0
Q ss_pred hHHHHHHHHHHhhhcccccccc---chhhHHHHHHHHHHhhhhhhcccc--Ccc-cceecCHHHHHHHHHhcCcchh-hh
Q 003207 267 VSIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYNLVKY--DIS-VVRAFNPIYIYLFFKKNGKDAW-SA 339 (839)
Q Consensus 267 isv~ILv~LF~iQr~GT~kVG~---~FgPImllWF~~l~~iGiynI~~~--~p~-Vl~AlnP~ya~~ff~~n~~~g~-~~ 339 (839)
..++++++++.+.-+|+...|+ .+.-+-++-++.+-++|+.-+... .|. .+.-+.+. .-+..++..++ ..
T Consensus 129 ~~~i~~~~~~~lN~~gv~~~~~~~~~~~~iki~~i~~~ii~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~ 205 (456)
T PRK10238 129 SAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMIIFGGWLLFSGNGGPQATVSNLWDQ---GGFLPHGFTGLVMM 205 (456)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCccccccCCC---CCCccccHHHHHHH
Confidence 4555566778888888876665 222332222332223343322211 121 11111000 00111222222 23
Q ss_pred hhhhHHHhhchhh--hhcCCCCCCccchhhhhHHhHHHHHHHhhcch
Q 003207 340 LGGCVLCITGAEA--MFADLGHFSVKAIQIAFTLVVFPCLLLAYMGQ 384 (839)
Q Consensus 340 LG~VvL~iTGaEA--LyADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQ 384 (839)
++.++.+.+|-|+ ..|.=-+-.+|.|-.|-.. +.-.+.+.|++=
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~~ 251 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIGS 251 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHHH
Confidence 5567788889887 4455446677778877654 334445556653
No 25
>PRK10580 proY putative proline-specific permease; Provisional
Probab=73.54 E-value=93 Score=35.79 Aligned_cols=100 Identities=14% Similarity=0.095 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhhhcccccccc---chhhHHHHHHHHHHhhhhhh----ccc-cCcccce-ecCHHHHHHHHHhcCcchh-
Q 003207 268 SIIILVALFSIQRFGTGKVGF---MFAPVLALWFFSLGSIGLYN----LVK-YDISVVR-AFNPIYIYLFFKKNGKDAW- 337 (839)
Q Consensus 268 sv~ILv~LF~iQr~GT~kVG~---~FgPImllWF~~l~~iGiyn----I~~-~~p~Vl~-AlnP~ya~~ff~~n~~~g~- 337 (839)
.++++++++.++-+|....++ .+.-+.++-++.+.++|+.- ..+ .+|.-.+ .+++- .++ .++..++
T Consensus 127 ~~~~~~l~~~ln~~gv~~~~~~~~~~~~~~~~~l~~~ii~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~-~~g~~~~~ 202 (457)
T PRK10580 127 VLSVVLIICAVNLMSVKVFGELEFWFSFFKVATIIIMIVAGIGIIIWGIGNGGQPTGIHNLWSNG---GFF-SNGWLGMV 202 (457)
T ss_pred HHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCccccCCCC---CCC-CcchHHHH
Confidence 445566778899999766665 44444444444444444321 111 0111011 01000 011 1222222
Q ss_pred hhhhhhHHHhhchhhh--hcCCCCCCccchhhhhHH
Q 003207 338 SALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTL 371 (839)
Q Consensus 338 ~~LG~VvL~iTGaEAL--yADlGHFg~~~Iqiaw~~ 371 (839)
..+..++.+.+|-|+. .|.=-+-.+|.|-.|-..
T Consensus 203 ~~~~~~~fsf~G~e~~~~~a~E~knP~k~iPrAi~~ 238 (457)
T PRK10580 203 MSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINS 238 (457)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHhcChhhHHHHHHHH
Confidence 3455667888898865 344446666777776553
No 26
>PRK11387 S-methylmethionine transporter; Provisional
Probab=71.04 E-value=94 Score=35.93 Aligned_cols=33 Identities=18% Similarity=0.221 Sum_probs=18.5
Q ss_pred hhhhhHHHhhchhhh--hcCCCCCCccchhhhhHH
Q 003207 339 ALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTL 371 (839)
Q Consensus 339 ~LG~VvL~iTGaEAL--yADlGHFg~~~Iqiaw~~ 371 (839)
.+..++.+.+|-|.. .|.==+-.+|.|-.|-..
T Consensus 211 ~~~~~~faf~G~e~~~~~a~E~knP~r~iPrAi~~ 245 (471)
T PRK11387 211 TMVAVNFAFSGTELIGIAAGETENPAKVIPVAIRT 245 (471)
T ss_pred HHHHHHHHHcCHHHHHHHHHHhcChhhHHHHHHHH
Confidence 444566777777753 333334556667666543
No 27
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=66.39 E-value=1.4e+02 Score=34.58 Aligned_cols=107 Identities=13% Similarity=0.049 Sum_probs=51.7
Q ss_pred hhhhhhHHHhhchhhh--hcCCCCCCccchhhhhHHhHHHHHHHhhcchhhHhhc--CCCc---ccCccccc----ccCc
Q 003207 338 SALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMK--YPDS---ANRIFYDS----VPDS 406 (839)
Q Consensus 338 ~~LG~VvL~iTGaEAL--yADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~--~p~~---~~npFy~~----iP~~ 406 (839)
..+..++.+.+|-|+. .|.==+-.+|.|..|-.. +.-...+-|+-....+.. .+++ .++||-.. --++
T Consensus 215 ~~~~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~ 293 (469)
T PRK11049 215 AGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPA 293 (469)
T ss_pred HHHHHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChh
Confidence 3455566777888854 333335667777777643 333334445544433322 2222 23554221 1112
Q ss_pred chHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCc
Q 003207 407 LFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPR 445 (839)
Q Consensus 407 ~~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR 445 (839)
...-+.+++.++.+-+..+.+.+.=-++...-+-|.+|+
T Consensus 294 ~~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 332 (469)
T PRK11049 294 AASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPK 332 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH
Confidence 222222333333344444444444455555557899996
No 28
>PRK11021 putative transporter; Provisional
Probab=66.26 E-value=2.3e+02 Score=31.98 Aligned_cols=100 Identities=14% Similarity=0.157 Sum_probs=49.7
Q ss_pred ehhhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhcc-ccCcccceecCHHHHHHHHHhcCcchh-hhhh
Q 003207 264 LVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLV-KYDISVVRAFNPIYIYLFFKKNGKDAW-SALG 341 (839)
Q Consensus 264 Vv~isv~ILv~LF~iQr~GT~kVG~~FgPImllWF~~l~~iGiynI~-~~~p~Vl~AlnP~ya~~ff~~n~~~g~-~~LG 341 (839)
..++++++++++..+.-+|.+..+++-.=+.+ +.+..+++.-.. +.++.-+ .+++ +..++..+| ..+.
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~ 184 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQTVIAL---LIVALVVAIWWAGDIKPADI-PFPA------PGSIEWSGLFAALG 184 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH---HHHHHHHHHHHHcCCchhcC-CCCC------CCCccHHHHHHHHH
Confidence 45677888888899999998888774331111 112222221111 1122211 1110 011222222 2345
Q ss_pred hhHHHhhchhhh--hcCCCCCCccchhhhhHHhH
Q 003207 342 GCVLCITGAEAM--FADLGHFSVKAIQIAFTLVV 373 (839)
Q Consensus 342 ~VvL~iTGaEAL--yADlGHFg~~~Iqiaw~~~V 373 (839)
.++.+.+|-|+. +|+==+-.+|.|..|-..-+
T Consensus 185 ~~~~af~G~e~~~~~a~E~k~P~k~iPrAi~~~~ 218 (410)
T PRK11021 185 VMFWCFVGIEAFAHLASEFKNPERDFPRALMIGL 218 (410)
T ss_pred HHHHHHhcHHHHHhhHHhccCccccccHHHHHHH
Confidence 566778888864 44444555667766665533
No 29
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=66.24 E-value=1.7e+02 Score=33.51 Aligned_cols=45 Identities=7% Similarity=0.121 Sum_probs=25.6
Q ss_pred hhhHHHHHHHHHHhhhccccccc---cchhhHHHHHHHHHHhhhhhhc
Q 003207 265 VIVSIIILVALFSIQRFGTGKVG---FMFAPVLALWFFSLGSIGLYNL 309 (839)
Q Consensus 265 v~isv~ILv~LF~iQr~GT~kVG---~~FgPImllWF~~l~~iGiynI 309 (839)
..+.+++++++..+.-+|.+..+ ..+.=+.++=++.+.++|++.+
T Consensus 128 ~~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~ 175 (445)
T PRK11357 128 KFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF 175 (445)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 35566677777788989876444 3443333333444455565443
No 30
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=66.14 E-value=72 Score=36.50 Aligned_cols=24 Identities=13% Similarity=0.276 Sum_probs=17.1
Q ss_pred hhHHHHHHHHHHhhhccccccccc
Q 003207 266 IVSIIILVALFSIQRFGTGKVGFM 289 (839)
Q Consensus 266 ~isv~ILv~LF~iQr~GT~kVG~~ 289 (839)
.+.+++++++..+.-+|+...+++
T Consensus 127 ~~~~~~~~~~~~ln~~gvk~~~~i 150 (445)
T PRK10644 127 ITCVVVLWIFVLLNIVGPKMITRV 150 (445)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHH
Confidence 355666777888899998776653
No 31
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=64.44 E-value=1.4e+02 Score=35.17 Aligned_cols=57 Identities=14% Similarity=0.144 Sum_probs=31.5
Q ss_pred hhhhhhhhHHHhhchhhh--hcCCCCCCccchhhhhHHhHHHHHHHhhcchhhHhhcCC
Q 003207 336 AWSALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMKYP 392 (839)
Q Consensus 336 g~~~LG~VvL~iTGaEAL--yADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~~p 392 (839)
++..+-+++.+.+|-|+. .|+==+-.+|.+-.|-...+.-+.++.++|--++.+.-|
T Consensus 196 ~~~~~~~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~~~i~~~~p 254 (507)
T TIGR00910 196 TLVVFVAFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGGFSIAAVIP 254 (507)
T ss_pred HHHHHHHHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHHHHHheecC
Confidence 444445567788998865 455445556666666555444444444444444433333
No 32
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=62.75 E-value=2.5e+02 Score=32.51 Aligned_cols=172 Identities=12% Similarity=0.013 Sum_probs=76.1
Q ss_pred hhhHHHHHHHHHHhhhccccccccc---hhhHHHHHHHHHHhhhhhhccccCcccce-ecCHHHHHHHHHhcCcchh-hh
Q 003207 265 VIVSIIILVALFSIQRFGTGKVGFM---FAPVLALWFFSLGSIGLYNLVKYDISVVR-AFNPIYIYLFFKKNGKDAW-SA 339 (839)
Q Consensus 265 v~isv~ILv~LF~iQr~GT~kVG~~---FgPImllWF~~l~~iGiynI~~~~p~Vl~-AlnP~ya~~ff~~n~~~g~-~~ 339 (839)
..++++++++++.+.-+|....+++ +.-+.++=++.+.+.|+... ++..+. -++|...- ...+...+| ..
T Consensus 130 ~~~~~~~~~~~~~ln~~Gi~~~~~i~~~~~~~~l~~l~~~ii~~~~~~---~~~~~~~~~~~~~~p--~~~~~~~~~~~~ 204 (473)
T TIGR00905 130 ILGASVLLWVFTFLVLRGVRQAAFINTITTIAKLIPLFLFIIIGWFWF---KLDLFTADFWGHDVP--SLGSVFSQVKNT 204 (473)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---CchhcccccCccCCC--cccchHHHHHHH
Confidence 3456666677888999999776653 23222222223333444321 222221 11111000 000011121 12
Q ss_pred hhhhHHHhhchhhhh---cCCCC--CCccchhhhhHH--hHHHHHHHhhcchh--hHhhcCCCcccCcc-----cccccC
Q 003207 340 LGGCVLCITGAEAMF---ADLGH--FSVKAIQIAFTL--VVFPCLLLAYMGQA--AYLMKYPDSANRIF-----YDSVPD 405 (839)
Q Consensus 340 LG~VvL~iTGaEALy---ADlGH--Fg~~~Iqiaw~~--~V~PaLlL~Y~GQg--A~Ll~~p~~~~npF-----y~~iP~ 405 (839)
+...+.+.+|-|+.- .++=+ --.|++..+-.. +.|-+..+.+.|.. .-+. +..+|+ .....+
T Consensus 205 ~~~~~~af~G~e~~~~~a~E~k~~r~iPrai~~~~~i~~~~Yil~~~~~~~~~~~~~l~----~~~~p~~~~~~~~~~g~ 280 (473)
T TIGR00905 205 MLVTLWVFIGIEGAVVSSGRAKNKSDVGKATVLGTLGALVIYILITLLSLGVLPQQELA----NLPNPSMAAVLEMIVGK 280 (473)
T ss_pred HHHHHHHHHhHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHh----hCCCchHHHHHHHHhCh
Confidence 344677888888752 23333 223444444332 23322222232211 0111 123452 223344
Q ss_pred cchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCc
Q 003207 406 SLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPR 445 (839)
Q Consensus 406 ~~~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR 445 (839)
+...-+.+.+.+++.-+.-+.+.+.--+..+.-+-|.+||
T Consensus 281 ~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~ 320 (473)
T TIGR00905 281 WGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPK 320 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhH
Confidence 4444343434444444555566666666666778899997
No 33
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=55.13 E-value=98 Score=33.91 Aligned_cols=55 Identities=15% Similarity=0.218 Sum_probs=40.2
Q ss_pred hhhhhhhhchhhhHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH----HHHHHHHHh
Q 003207 483 TDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLCFPLVFGS----VELLYMSAV 537 (839)
Q Consensus 483 ~~l~~AYGiAV~~vM~iTT~L~~~vm~~vw~~~~~~~~~f~~~F~~----ie~~f~sa~ 537 (839)
.+-=..||-+|..+.++.++-++..+..+.+.+++.+++|.++++. +|-..+|+.
T Consensus 12 r~k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~ 70 (301)
T PF14362_consen 12 RNKYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSI 70 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 3444578999999999999888888888899887777776666554 455555543
No 34
>TIGR00913 2A0310 amino acid permease (yeast).
Probab=54.30 E-value=1.4e+02 Score=34.40 Aligned_cols=104 Identities=16% Similarity=0.123 Sum_probs=48.1
Q ss_pred hhhHHHhhchhhh--hcCCCCCCccchhhhhHHhHHHHHHHhhcchhhHh-hcCC-C------------cccCcccc---
Q 003207 341 GGCVLCITGAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYL-MKYP-D------------SANRIFYD--- 401 (839)
Q Consensus 341 G~VvL~iTGaEAL--yADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~L-l~~p-~------------~~~npFy~--- 401 (839)
..++.+.+|-|+. .|+==+-.+|.|-.|-..-+.-+ .+-|+.....+ ..-| + ....||..
T Consensus 204 ~~~~~af~G~e~~~~~a~E~knP~r~iPrai~~~~~~~-~~~Y~l~~~~~~~~~p~~~~~l~~~~~~~~~~~~p~~~~~~ 282 (478)
T TIGR00913 204 VTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRI-LVFYILTLFLIGFLVPYNDPRLLSSSSSSDSAASPFVIAIQ 282 (478)
T ss_pred HHHHhhhccHHHHHHHHHhhcChhhHHHHHHHHHHHHH-HHHHHHHHHHheeeccCCChhhcccccCCCcCCCcHHHHHH
Confidence 3345677787753 44545666777766654423222 33355433211 1112 1 01245532
Q ss_pred ccc-CcchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCc
Q 003207 402 SVP-DSLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPR 445 (839)
Q Consensus 402 ~iP-~~~~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR 445 (839)
..- ++...-+.+.+.++.+-+-.+.+.++=-++...-+-|.+|+
T Consensus 283 ~~g~~~~~~~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~ 327 (478)
T TIGR00913 283 NHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYALAHQGLAPK 327 (478)
T ss_pred HcCCchHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhCCcccH
Confidence 111 22222222333333333334444455555666668899996
No 35
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=51.83 E-value=4.2e+02 Score=30.37 Aligned_cols=193 Identities=14% Similarity=0.139 Sum_probs=83.9
Q ss_pred hhHHHHHHHHHHhhhccccccccchhh---HHHHHHHHHHhhhhhhccccCccc----ceecCHHHHHHHHHhcCcc-hh
Q 003207 266 IVSIIILVALFSIQRFGTGKVGFMFAP---VLALWFFSLGSIGLYNLVKYDISV----VRAFNPIYIYLFFKKNGKD-AW 337 (839)
Q Consensus 266 ~isv~ILv~LF~iQr~GT~kVG~~FgP---ImllWF~~l~~iGiynI~~~~p~V----l~AlnP~ya~~ff~~n~~~-g~ 337 (839)
.+++++++++..+.-+|+...+++--. +.++-++.+.++|+..+..++|.. +.-+.+.- . +..++.. -+
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~g~~~~~ 204 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAIFGFAPGSEVSGFSNLTGKG--G-FFPNGIGAVL 204 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCccccccCCC--C-cCcccHHHHH
Confidence 466677777778888998777765433 222223333344544333222221 11111000 0 0112221 12
Q ss_pred hhhhhhHHHhhchhhh--hcCCCCCCccchhhhhHHhHHHHHHHhhcchhhHhhc-CC----Cccc-Ccccc---cc-cC
Q 003207 338 SALGGCVLCITGAEAM--FADLGHFSVKAIQIAFTLVVFPCLLLAYMGQAAYLMK-YP----DSAN-RIFYD---SV-PD 405 (839)
Q Consensus 338 ~~LG~VvL~iTGaEAL--yADlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQgA~Ll~-~p----~~~~-npFy~---~i-P~ 405 (839)
..+...+.+.+|-|+. +|+-=+-.+|.|..|-.. ......+.|+.=...... -| +..+ .||-. .. .+
T Consensus 205 ~a~~~~~~af~G~e~~~~~a~E~k~P~r~iPrAi~~-~~~~~~~~y~l~~~~~~~~~p~~~~~~~~~~p~~~~~~~~g~~ 283 (452)
T TIGR01773 205 LAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNS-VIWRIIVFYLGSIFIVVALLPWNSPNLLEVGSYVAVLELLGIP 283 (452)
T ss_pred HHHHHHHHHhccHHHHhHHHHhhcChhhHHHHHHHH-HHHHHHHHHHHHHHHHeeEeCCCCcccccCCcHHHHHHHcCCh
Confidence 3445566778888864 333334455667777532 222334445542222221 12 1111 25422 11 11
Q ss_pred cchHHHHHHHHHHHHHHHhHHhhhhhHHHHHHHHcCCCCceeEEecCCccCCceeechhHHHH
Q 003207 406 SLFWPVFVLAALAAMIASQAMISATFSCIKQAMALGCFPRLKIIHTSRKRMGQIYIPVINWFL 468 (839)
Q Consensus 406 ~~~wP~~vlAtlAtIIASQA~ISg~FSii~Qai~Lg~fPR~kIvhTS~~~~GQIYIP~VNwlL 468 (839)
+..+-+-+++.++.+-+..+.+.++--+....-+-|.+|+. .-+++++ | .|..--++
T Consensus 284 ~~~~ii~~~~~~~~~~~~~~~~~~~sR~~~a~ardg~lP~~-~~~v~~~---~--~P~~Ail~ 340 (452)
T TIGR01773 284 HAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRV-FMKLNKK---G--VPVQAVLA 340 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCHH-HHhhCCC---C--CcHHHHHH
Confidence 22222222222333333344444444555555678999952 2233332 2 67655444
No 36
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=47.35 E-value=5.1e+02 Score=30.05 Aligned_cols=25 Identities=20% Similarity=0.236 Sum_probs=18.4
Q ss_pred ehhhHHHHHHHHHHhhhcccccccc
Q 003207 264 LVIVSIIILVALFSIQRFGTGKVGF 288 (839)
Q Consensus 264 Vv~isv~ILv~LF~iQr~GT~kVG~ 288 (839)
...+++++++++..+.-+|+...++
T Consensus 144 ~~~~~~~~~~~~~~in~~g~k~~~~ 168 (475)
T TIGR03428 144 AVLLGSVLLVLTTVINCIGVEWMSR 168 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 4566677777788888899876655
No 37
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [], [], []. These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found in a wide variety of permeases, as well as several hypothetical proteins. ; GO: 0006810 transport, 0055085 transmembrane transport, 0016020 membrane
Probab=43.79 E-value=22 Score=40.86 Aligned_cols=36 Identities=28% Similarity=0.242 Sum_probs=24.1
Q ss_pred hhhhhhhhHHHhhchh--hhhcCCCCCCccchhhhhHH
Q 003207 336 AWSALGGCVLCITGAE--AMFADLGHFSVKAIQIAFTL 371 (839)
Q Consensus 336 g~~~LG~VvL~iTGaE--ALyADlGHFg~~~Iqiaw~~ 371 (839)
-|..+.-++.+.+|-| +.+|+==.=.+|+|..|-..
T Consensus 202 ~~~~~~~~~~af~G~e~~a~~a~E~k~P~k~IPra~~~ 239 (478)
T PF00324_consen 202 FFAALVFAFFAFVGFESIAILAEEAKNPRKTIPRATLL 239 (478)
T ss_pred HHHhhhhhhcccccccccccccccCCCchhhhhhHhhh
Confidence 4556677788889988 45666556666677666544
No 38
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=41.82 E-value=84 Score=32.81 Aligned_cols=21 Identities=5% Similarity=0.287 Sum_probs=16.9
Q ss_pred CCcHHHHHHHHhHhhhhhhhh
Q 003207 544 GGWLPLAFASVFLCVMYIWNY 564 (839)
Q Consensus 544 GGW~pL~ia~v~~~iM~tW~~ 564 (839)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999988766653
No 39
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=41.29 E-value=59 Score=38.52 Aligned_cols=117 Identities=25% Similarity=0.269 Sum_probs=74.4
Q ss_pred ceehhhHHHHHHHHHHhhhcccccccc--chhhHHHHHHHHHHhhh--hhhccccCcccceec--CHH-HHHHHHHhcCc
Q 003207 262 SALVIVSIIILVALFSIQRFGTGKVGF--MFAPVLALWFFSLGSIG--LYNLVKYDISVVRAF--NPI-YIYLFFKKNGK 334 (839)
Q Consensus 262 ~~Vv~isv~ILv~LF~iQr~GT~kVG~--~FgPImllWF~~l~~iG--iynI~~~~p~Vl~Al--nP~-ya~~ff~~n~~ 334 (839)
-|=+.++++||++++..+|.-..+ |. =-.--+++|-+.-|++| +|.++. +++.+..- ||. -++++. +
T Consensus 25 ~YGl~ialGil~a~~l~~r~~kr~-g~~~~~i~dl~i~~vi~giIGARL~yVl~-~~~~y~~~~~~P~~~il~iw--~-- 98 (460)
T PRK13108 25 AYAVCVITGIIVALLIGDRRLTAR-GGERGMTYDIALWAVPFGLIGGRLYHLAT-DWRTYFGDGGAGLAAALRIW--D-- 98 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhHHHHhc-CHHHHhccccChHHHHHhhc--c--
Confidence 355678888888887776654332 21 11224568888888999 888886 57766553 787 666543 3
Q ss_pred chhhhhhhhHHHhhchhhhhcCCCCCCccchhh-hhHHhHHHHHHHhhc-chhhHhhc
Q 003207 335 DAWSALGGCVLCITGAEAMFADLGHFSVKAIQI-AFTLVVFPCLLLAYM-GQAAYLMK 390 (839)
Q Consensus 335 ~g~~~LG~VvL~iTGaEALyADlGHFg~~~Iqi-aw~~~V~PaLlL~Y~-GQgA~Ll~ 390 (839)
.|...-||++..+.|+- +|+ -++-|.+ .|.=++-|++.|.++ |.=.-+++
T Consensus 99 GGLsi~GGlIGg~l~~~-~y~-----r~~ki~~~~~~D~~ap~l~lGqaiGRiGnF~N 150 (460)
T PRK13108 99 GGLGIWGAVTLGVMGAW-IGC-----RRCGIPLPVLLDAVAPGVVLAQAIGRLGNYFN 150 (460)
T ss_pred CCchHHHHHHHHHHHHH-HHH-----HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 37888899988887764 443 1233333 334467899988775 66555553
No 40
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=41.00 E-value=12 Score=41.42 Aligned_cols=32 Identities=19% Similarity=0.344 Sum_probs=24.7
Q ss_pred CCCCCCccchhhhhHHhHHHHHHHhhcchh-----hHhhcCCCccc
Q 003207 356 DLGHFSVKAIQIAFTLVVFPCLLLAYMGQA-----AYLMKYPDSAN 396 (839)
Q Consensus 356 DlGHFg~~~Iqiaw~~~V~PaLlL~Y~GQg-----A~Ll~~p~~~~ 396 (839)
+=++|||.+|||+|-. ..||+ .=||+|||-+.
T Consensus 171 gk~Y~GRG~iQlsWNy---------NYG~ag~alg~dLL~~Pe~V~ 207 (286)
T KOG4742|consen 171 GKSYYGRGPIQLSWNY---------NYGAAGKALGLDLLRNPELVA 207 (286)
T ss_pred CCcccccCcccccccc---------cccHhHhhcCchhhcCcchhc
Confidence 3479999999999988 33544 34788999766
No 41
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=37.26 E-value=11 Score=41.86 Aligned_cols=62 Identities=23% Similarity=0.418 Sum_probs=0.0
Q ss_pred HHHHHHHh--cchHHHHHHHHHHHHHHHHHHHHhHhcccCCCcHHHHHH---HHhHhhhhhhhhhHHHHH
Q 003207 506 IVMLLIWQ--TNLLLVLCFPLVFGSVELLYMSAVLSKIAEGGWLPLAFA---SVFLCVMYIWNYGSVLKY 570 (839)
Q Consensus 506 ~vm~~vw~--~~~~~~~~f~~~F~~ie~~f~sa~l~K~~~GGW~pL~ia---~v~~~iM~tW~~G~~~~~ 570 (839)
++|.+.|+ .++|..+.|++.|+.-=.+...|++. +=.||++++- .++|+-..+|-|-+.-..
T Consensus 124 ~Ym~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~L---~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 124 FYMWLLRELGASFWTILAFCLAFLLAIVLLIIAVLL---HQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp ----------------------------------------------------------------------
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34555565 46788888887776655555556554 5689999865 467888899999877654
No 42
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=35.46 E-value=32 Score=37.13 Aligned_cols=30 Identities=23% Similarity=0.637 Sum_probs=25.4
Q ss_pred ccCCCcHHHHHHHHhHhhhhhhhhhHHHHH
Q 003207 541 IAEGGWLPLAFASVFLCVMYIWNYGSVLKY 570 (839)
Q Consensus 541 ~~~GGW~pL~ia~v~~~iM~tW~~G~~~~~ 570 (839)
=.+|||..++++.+...+..+|++--+.+.
T Consensus 258 ~i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 258 SIQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred ccccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 348999999999999999999998655543
No 43
>PRK11909 cobalt transport protein CbiM; Provisional
Probab=32.64 E-value=1.9e+02 Score=31.17 Aligned_cols=64 Identities=14% Similarity=0.120 Sum_probs=37.1
Q ss_pred hhhHHhHHHHHHHhhcchhhHhhcCC----CcccCcccccccCcchHHHHHHHHHHHHHHHhHHhhhh
Q 003207 367 IAFTLVVFPCLLLAYMGQAAYLMKYP----DSANRIFYDSVPDSLFWPVFVLAALAAMIASQAMISAT 430 (839)
Q Consensus 367 iaw~~~V~PaLlL~Y~GQgA~Ll~~p----~~~~npFy~~iP~~~~wP~~vlAtlAtIIASQA~ISg~ 430 (839)
++.+.-.+=+.+++++.-+.-|--.| +...+|+|...|-....|.+..+=+.-+---+++||+.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~h~~i~~i~Eg~iT~~ 204 (230)
T PRK11909 137 IASAIGGYVGINAAALATGIEFGLQPFLFHTANGTPLYCPYGLNVSIPAMLFAHLTVAGIVEAIVTGL 204 (230)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444455666677777766664444 34566777776766666666666554312226777664
No 44
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=31.16 E-value=34 Score=40.19 Aligned_cols=90 Identities=22% Similarity=0.376 Sum_probs=57.2
Q ss_pred HcCCCCceeEEecCCccCC----ceeechhHHHHHHHhheeeEEeCChhhhhhhhhchhhhHHHHHHHHHHHHHH-----
Q 003207 439 ALGCFPRLKIIHTSRKRMG----QIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVML----- 509 (839)
Q Consensus 439 ~Lg~fPR~kIvhTS~~~~G----QIYIP~VNwlLmi~~i~vv~~F~~S~~l~~AYGiAV~~vM~iTT~L~~~vm~----- 509 (839)
+-|-.||+-+...=++..| |+|+|.+= +..+-=|-.-=+-++-.+=-.+++|.+..|||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 4789999999988888777 99999862 1111112222355556666789999999999987654211
Q ss_pred HHHhcchHHHHHHHHHHHH-HHHH
Q 003207 510 LIWQTNLLLVLCFPLVFGS-VELL 532 (839)
Q Consensus 510 ~vw~~~~~~~~~f~~~F~~-ie~~ 532 (839)
+|--.-+.+.++|+.+|++ +|-+
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA 324 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYA 324 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHH
Confidence 1122234566777777765 4443
No 45
>PRK10836 lysine transporter; Provisional
Probab=28.33 E-value=1e+03 Score=27.83 Aligned_cols=31 Identities=16% Similarity=0.261 Sum_probs=19.1
Q ss_pred CcccHHHHHHHHHhhcceeecccCcchHHHHHHhhcc
Q 003207 85 KDVSVWHTLALAFQTLGVVYGDMGTSPLYVYSDVFSK 121 (839)
Q Consensus 85 ~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~ 121 (839)
++.+.+....++++++ |||.-+-.-......
T Consensus 15 r~L~~~~~~~l~vG~~------IGsGif~~~g~~~~~ 45 (489)
T PRK10836 15 RELKARHLTMIAIGGS------IGTGLFVASGATISQ 45 (489)
T ss_pred ccCcHHHHHHHHHhhh------hhhhhhHhhhHHHHh
Confidence 3466666666655544 788777666666543
No 46
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=22.95 E-value=68 Score=26.24 Aligned_cols=30 Identities=30% Similarity=0.421 Sum_probs=17.0
Q ss_pred HHhHhhhhhhhhhHHHHHHHHHhcCCChHH
Q 003207 553 SVFLCVMYIWNYGSVLKYRSEVREKISMDF 582 (839)
Q Consensus 553 ~v~~~iM~tW~~G~~~~~~~~~~~~~~~~~ 582 (839)
.++|+....|.|-++.|.+++....+|+++
T Consensus 19 ~~~F~gi~~w~~~~~~k~~~e~aa~lpl~d 48 (49)
T PF05545_consen 19 FVFFIGIVIWAYRPRNKKRFEEAANLPLDD 48 (49)
T ss_pred HHHHHHHHHHHHcccchhhHHHHHccCccC
Confidence 344444555666555566666666676653
No 47
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=20.37 E-value=70 Score=36.11 Aligned_cols=90 Identities=21% Similarity=0.335 Sum_probs=55.2
Q ss_pred hhhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHH-hhh-hhhccccCcccceecCHHHHHHHHHhcCcchhhhhhh
Q 003207 265 VIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLG-SIG-LYNLVKYDISVVRAFNPIYIYLFFKKNGKDAWSALGG 342 (839)
Q Consensus 265 v~isv~ILv~LF~iQr~GT~kVG~~FgPImllWF~~l~-~iG-iynI~~~~p~Vl~AlnP~ya~~ff~~n~~~g~~~LG~ 342 (839)
+.+.+..++.+|.+|-++....+-. -.+||+..- .+= ..-++||-|.... =+.|....|| +.|+
T Consensus 234 ialgil~i~~~f~~~~~~va~~~~~----~wL~f~~~~syiKl~mTliKYiPQa~m---------N~tRKSt~gw-sIgn 299 (372)
T KOG3145|consen 234 IALGILAIFWLFAVVFMYVAYWYVI----RWLAFLNNLSYIKLAMTLIKYIPQAYM---------NFTRKSTVGW-SIGN 299 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHH----HHHHHHHHHHHHHHHHHHHHhhhHHhh---------cceecccccc-cccc
Confidence 4455555567888887765433221 245554432 111 2345676565432 2456667787 5799
Q ss_pred hHHHhhchhh-----------------hhcCCCCCCccchhhh
Q 003207 343 CVLCITGAEA-----------------MFADLGHFSVKAIQIA 368 (839)
Q Consensus 343 VvL~iTGaEA-----------------LyADlGHFg~~~Iqia 368 (839)
|+|=+|||-| .|+|+|-||-.-+.+=
T Consensus 300 IlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~vSi~ 342 (372)
T KOG3145|consen 300 ILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLVSIF 342 (372)
T ss_pred EEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhHHHH
Confidence 9999999965 6899999996654443
No 48
>PRK11492 hyfE hydrogenase 4 membrane subunit; Provisional
Probab=20.20 E-value=1e+03 Score=25.50 Aligned_cols=128 Identities=13% Similarity=0.108 Sum_probs=70.4
Q ss_pred CCCceeEEecCCccCCceeechhHHHHHHHhheeeEEeCChhhhhhhhhchhhhHHHHHHHHHHHHHHHHHhcchHHHHH
Q 003207 442 CFPRLKIIHTSRKRMGQIYIPVINWFLMIMCVVVVSIFQSTTDIANAYGIAEVGVMLVSSTLVTIVMLLIWQTNLLLVLC 521 (839)
Q Consensus 442 ~fPR~kIvhTS~~~~GQIYIP~VNwlLmi~~i~vv~~F~~S~~l~~AYGiAV~~vM~iTT~L~~~vm~~vw~~~~~~~~~ 521 (839)
...|+++.+--+...|..+-+.+.-.+.+.|..++.-+....+...-+.++++.+++...++..+ . |+|.+..+.
T Consensus 79 ~~~k~~~~re~~p~i~~~~s~ll~~~~~i~s~~~~~~i~~~~~~~~~~~l~~a~~lf~iGl~~~i----~-Rrn~i~~ii 153 (216)
T PRK11492 79 AARKLGDNIEEEPVFGPAMSILLAALIVLLCAFVVQPVKLPMALGLKPALAVSLGHFLLGLLCIV----S-QRNILKQIF 153 (216)
T ss_pred HHHHhCCccccccccchHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHH----H-HhHHHHHHH
Confidence 34567776555556677777777777777777777666544444544556666666665555433 2 445443322
Q ss_pred HHHHHHHHHHH-HHHH-hHhcc-c----CCCcHHHHHHHHhHhhhhhhhhhHHHHHHHHHhcCCChHHHHH
Q 003207 522 FPLVFGSVELL-YMSA-VLSKI-A----EGGWLPLAFASVFLCVMYIWNYGSVLKYRSEVREKISMDFLLD 585 (839)
Q Consensus 522 f~~~F~~ie~~-f~sa-~l~K~-~----~GGW~pL~ia~v~~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~ 585 (839)
.|..+|-. ++.. ...+- | -|--+-.+++.+++.+.. ..-++..++++.|++.+
T Consensus 154 ---g~~~meNgv~L~~~~~~~~~p~~VE~g~~~d~l~av~i~~i~a--------~~i~r~~~sid~~~l~~ 213 (216)
T PRK11492 154 ---GYCLMENGSHLTLALLAYNAPELVEIGIATDAIFAVIIMVLLA--------RKIYRTHGTLDVNKLTA 213 (216)
T ss_pred ---HHHHHHHHHHHHHHHHHhhcchhhhccccccHHHHHHHHHHHH--------HHHHHhcCCCcHHHHHh
Confidence 33333322 1211 12222 2 144566777777777777 22233456777776654
No 49
>PRK10197 gamma-aminobutyrate transporter; Provisional
Probab=20.15 E-value=1.4e+03 Score=26.45 Aligned_cols=24 Identities=21% Similarity=0.250 Sum_probs=16.1
Q ss_pred hhhHHHHHHHHHHhhhcccccccc
Q 003207 265 VIVSIIILVALFSIQRFGTGKVGF 288 (839)
Q Consensus 265 v~isv~ILv~LF~iQr~GT~kVG~ 288 (839)
..+++++++++..+.-+|....|.
T Consensus 107 ~~~~~~~l~~~~~lN~~gv~~~~~ 130 (446)
T PRK10197 107 WLFSLVITLALTGSNLLSVKNYGE 130 (446)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhh
Confidence 345667777777777777766544
No 50
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=20.11 E-value=5.2e+02 Score=24.86 Aligned_cols=42 Identities=10% Similarity=0.077 Sum_probs=27.8
Q ss_pred eehhhHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHhhhhhhcc
Q 003207 263 ALVIVSIIILVALFSIQRFGTGKVGFMFAPVLALWFFSLGSIGLYNLV 310 (839)
Q Consensus 263 ~Vv~isv~ILv~LF~iQr~GT~kVG~~FgPImllWF~~l~~iGiynI~ 310 (839)
.++|+-+.+.++..+=++|||+. .|--++++.=++ +|++|+.
T Consensus 52 ~v~pil~G~~lG~WLD~~~~t~~---~~tl~~lllGv~---~G~~n~w 93 (100)
T TIGR02230 52 VAIPTLLGVAVGIWLDRHYPSPF---SWTLTMLIVGVV---IGCLNAW 93 (100)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCc---HHHHHHHHHHHH---HHHHHHH
Confidence 46788899999999999999954 343333333333 4555543
Done!