BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003213
(838 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255570428|ref|XP_002526173.1| suppressor of ty, putative [Ricinus communis]
gi|223534550|gb|EEF36249.1| suppressor of ty, putative [Ricinus communis]
Length = 1045
Score = 1511 bits (3912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 739/844 (87%), Positives = 797/844 (94%), Gaps = 7/844 (0%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
MQK IDKGSELQIRS IALDHLKNYIYIEADKEAHV+EACKGLRNIY+QK+MLVPI+EMT
Sbjct: 203 MQKYIDKGSELQIRSAIALDHLKNYIYIEADKEAHVREACKGLRNIYAQKIMLVPIKEMT 262
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 120
DVL+VESKAIDLSRDTWVRMKIG YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE
Sbjct: 263 DVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 322
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
GREVAKKK FVPPPRFMNVDEARELHIRVERRRDPM+GDYFENIGGMLFKDGFLYKTVSM
Sbjct: 323 GREVAKKKAFVPPPRFMNVDEARELHIRVERRRDPMSGDYFENIGGMLFKDGFLYKTVSM 382
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 240
KSIS QNI+PTFDELEKFR PGEN + DI LSTLFANRKKGHF+KGDAVI++KGDLKNL
Sbjct: 383 KSISVQNIKPTFDELEKFRKPGEN-DGDIVGLSTLFANRKKGHFVKGDAVIIVKGDLKNL 441
Query: 241 KGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
KGWVEKVDEENVHI+PEMK LP+T+AVN KELCKYFEPGNHVKVVSGTQ GATGMV+KVE
Sbjct: 442 KGWVEKVDEENVHIKPEMKDLPRTIAVNEKELCKYFEPGNHVKVVSGTQEGATGMVVKVE 501
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
QHVLIILSDTTKE IRVFADDVVESSEVTTG+TKIGDYEL DLVLLDN SFGVIIRVESE
Sbjct: 502 QHVLIILSDTTKEHIRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGVIIRVESE 561
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
AFQVLKGVP+RPEVALV+LREIKCK+EKK NVQDR KNT+AVKDVVRI++GPCKGKQGPV
Sbjct: 562 AFQVLKGVPERPEVALVRLREIKCKIEKKFNVQDRYKNTIAVKDVVRIIDGPCKGKQGPV 621
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
EHIY+G+LFI+DRHHLEHAGFICAKS SC+VVGG+RANGDRNGD+YSRF+S +TPPR+PQ
Sbjct: 622 EHIYKGVLFIYDRHHLEHAGFICAKSHSCIVVGGTRANGDRNGDSYSRFSSFKTPPRVPQ 681
Query: 481 SPGRYSRGGPP--AGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELE 538
SP R+ RGGPP +GGRNRGGRGGHDALVGTTVK+RLGP+KGYRGRVV++KG SVRVELE
Sbjct: 682 SPRRFPRGGPPFESGGRNRGGRGGHDALVGTTVKIRLGPFKGYRGRVVEIKGPSVRVELE 741
Query: 539 SQMKVV--TVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATP 596
SQMKV+ DR+ ISDNVV+STP+RD+ RYGMGSETPMHPSRTPLHPYMTPMRDAGATP
Sbjct: 742 SQMKVILGKFDRNNISDNVVISTPHRDSSRYGMGSETPMHPSRTPLHPYMTPMRDAGATP 801
Query: 597 IHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGW 656
IHDGMRTPMRDRAWNPY PMSPPRDNWEDGNP SWGTSP YQPGSPPSRAYEAPTPGSGW
Sbjct: 802 IHDGMRTPMRDRAWNPYAPMSPPRDNWEDGNPASWGTSPHYQPGSPPSRAYEAPTPGSGW 861
Query: 657 ASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTG 716
A+TPGG+YSDAGTPRDSSS Y NAPSPYLPSTPGGQPMTP+SA+YLPGTPGGQPMTPGTG
Sbjct: 862 ANTPGGSYSDAGTPRDSSSAYANAPSPYLPSTPGGQPMTPSSAAYLPGTPGGQPMTPGTG 921
Query: 717 GLDAMSPVIGADNEGPWFMPDIL--VRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTI 774
GLD MSPVIG DNEGPW+MPDIL VR++ ++S +GVIR+VL DGSCRVVLG++GNG+TI
Sbjct: 922 GLDVMSPVIGGDNEGPWYMPDILVNVRKAADDSAIGVIRDVLADGSCRVVLGANGNGETI 981
Query: 775 TALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAK 834
TALPNEIEIV PRK+DKIKIMGG HRGATGKLIGVDGTDGIVKVD +LDVKILDM ILAK
Sbjct: 982 TALPNEIEIVVPRKSDKIKIMGGAHRGATGKLIGVDGTDGIVKVDDTLDVKILDMVILAK 1041
Query: 835 LAQP 838
LAQP
Sbjct: 1042 LAQP 1045
>gi|449506979|ref|XP_004162900.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like, partial [Cucumis sativus]
Length = 849
Score = 1477 bits (3823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/842 (85%), Positives = 781/842 (92%), Gaps = 4/842 (0%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
MQKCID+G E+QIRS +ALDHLKN+IYIEADKEAHV+EACKGLRNIY+QK+ LVPI+EMT
Sbjct: 8 MQKCIDRGPEMQIRSAVALDHLKNFIYIEADKEAHVREACKGLRNIYAQKITLVPIKEMT 67
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 120
DVL+VESKAIDLSRDTWVRMKIG YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE
Sbjct: 68 DVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 127
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
GREVAKKK FVPPPRFMN+DEARELHIRVERRRDP+TG+YFENIGGM FKDGFLYKTVSM
Sbjct: 128 GREVAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSM 187
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 240
KSISAQNI+PTFDELEKFR PGENG+ DIASLSTLFANRKKGHFMKGDAVIV+KGDLKNL
Sbjct: 188 KSISAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNL 247
Query: 241 KGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
KGWVEKV+EENVHIRPEMKGLPKTLAVN +ELCKYFEPGNHVKVVSGTQ GATGMV+KV+
Sbjct: 248 KGWVEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVSGTQEGATGMVVKVD 307
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
QHVLIILSDTTKE IRVFADDVVESSEVTTG+T+IGDYEL DLVLLDN SFGVIIRVE+E
Sbjct: 308 QHVLIILSDTTKEHIRVFADDVVESSEVTTGVTRIGDYELHDLVLLDNMSFGVIIRVETE 367
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
AFQVLKG PDRPEV +VKLREIK K++KK +VQDR NT++ KDVVRI+EGPCKGKQGPV
Sbjct: 368 AFQVLKGTPDRPEVDIVKLREIKSKIDKKISVQDRFNNTISSKDVVRILEGPCKGKQGPV 427
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
EHIYRGILFI+DRHHLEHAGFICAKS SCVVVGGSR NG+RNG++YSRF + TPPR PQ
Sbjct: 428 EHIYRGILFIYDRHHLEHAGFICAKSQSCVVVGGSRTNGNRNGNSYSRFAGIATPPRFPQ 487
Query: 481 SPGRYSRGGPP--AGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELE 538
SP R+SRGGPP +GGR+RGGRG HD LVG+TVKVR GPYKGYRGRVV++KGQ VRVELE
Sbjct: 488 SPKRFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELE 547
Query: 539 SQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIH 598
SQMKVVTVDR+ ISDNV +STP+RD RYGMGSETPMHPSRTPLHPYMTPMRD G TPIH
Sbjct: 548 SQMKVVTVDRNFISDNVAISTPHRDASRYGMGSETPMHPSRTPLHPYMTPMRDIGTTPIH 607
Query: 599 DGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWAS 658
DGMRTPMRDRAWNPY PMSP RDNWE+GNP +WG SPQYQPGSPPSR YEAPTPGSGWA+
Sbjct: 608 DGMRTPMRDRAWNPYAPMSPSRDNWEEGNPATWGASPQYQPGSPPSRTYEAPTPGSGWAN 667
Query: 659 TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGL 718
TPGG+YSDAGTPRDS S Y NAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGL
Sbjct: 668 TPGGSYSDAGTPRDSGSAYANAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGL 727
Query: 719 DAMSPVIGADNEGPWFMPDILV--RRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITA 776
D MSPVIG D EGPW+MPDILV RRSG++ ++GVIREVLPDGSCR+ LGSSGNG+T+TA
Sbjct: 728 DMMSPVIGGDTEGPWYMPDILVNYRRSGDDPIMGVIREVLPDGSCRIGLGSSGNGETVTA 787
Query: 777 LPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLA 836
+E+E++ PRK+DKIKIMGG RGATGKLIGVDGTDGIVKVD +LDVKILD+ ILAKLA
Sbjct: 788 PSSEVEVIVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTLDVKILDLVILAKLA 847
Query: 837 QP 838
QP
Sbjct: 848 QP 849
>gi|449462178|ref|XP_004148818.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like [Cucumis sativus]
Length = 1044
Score = 1471 bits (3808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 718/846 (84%), Positives = 781/846 (92%), Gaps = 8/846 (0%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
MQKCID+G E+QIRS +ALDHLKN+IYIEADKEAHV+EACKGLRNIY+QK+ LVPI+EMT
Sbjct: 199 MQKCIDRGPEMQIRSAVALDHLKNFIYIEADKEAHVREACKGLRNIYAQKITLVPIKEMT 258
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 120
DVL+VESKAIDLSRDTWVRMKIG YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE
Sbjct: 259 DVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 318
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
GREVAKKK FVPPPRFMN+DEARELHIRVERRRDP+TG+YFENIGGM FKDGFLYKTVSM
Sbjct: 319 GREVAKKKAFVPPPRFMNIDEARELHIRVERRRDPITGEYFENIGGMFFKDGFLYKTVSM 378
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 240
KSISAQNI+PTFDELEKFR PGENG+ DIASLSTLFANRKKGHFMKGDAVIV+KGDLKNL
Sbjct: 379 KSISAQNIKPTFDELEKFRKPGENGDGDIASLSTLFANRKKGHFMKGDAVIVVKGDLKNL 438
Query: 241 KGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
KGWVEKV+EENVHIRPEMKGLPKTLAVN +ELCKYFEPGNHVKVVSGTQ GATGMV+KV+
Sbjct: 439 KGWVEKVEEENVHIRPEMKGLPKTLAVNERELCKYFEPGNHVKVVSGTQEGATGMVVKVD 498
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
QHVLIILSDTTKE IRVFADDVVESSEVTTG+T+IGDYEL DLVLLDN SFGVIIRVE+E
Sbjct: 499 QHVLIILSDTTKEHIRVFADDVVESSEVTTGVTRIGDYELHDLVLLDNMSFGVIIRVETE 558
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
AFQVLKG PDRPEV +VKLREIK K++KK +VQDR NT++ KDVVRI+EGPCKGKQGPV
Sbjct: 559 AFQVLKGTPDRPEVDIVKLREIKSKIDKKISVQDRFNNTISSKDVVRILEGPCKGKQGPV 618
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
EHIYRGILFI+DRHHLEHAGFICAKS SCVVVGGSR NG+RNG++YSRF + TPPR PQ
Sbjct: 619 EHIYRGILFIYDRHHLEHAGFICAKSQSCVVVGGSRTNGNRNGNSYSRFAGIATPPRFPQ 678
Query: 481 SPGRYSRGGPP--AGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELE 538
SP R+SRGGPP +GGR+RGGRG HD LVG+TVKVR GPYKGYRGRVV++KGQ VRVELE
Sbjct: 679 SPKRFSRGGPPNDSGGRHRGGRGHHDGLVGSTVKVRQGPYKGYRGRVVEIKGQLVRVELE 738
Query: 539 SQMKVVT----VDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGA 594
SQMKVVT +DR+ ISDNV +STP+RD RYGMGSETPMHPSRTPLHPYMTPMRD G
Sbjct: 739 SQMKVVTGMFKIDRNFISDNVAISTPHRDASRYGMGSETPMHPSRTPLHPYMTPMRDIGT 798
Query: 595 TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGS 654
TPIHDGMRTPMRDRAWNPY PMSP RDNWE+GNP +WG SPQYQPGSPPSR YEAPTPGS
Sbjct: 799 TPIHDGMRTPMRDRAWNPYAPMSPSRDNWEEGNPATWGASPQYQPGSPPSRTYEAPTPGS 858
Query: 655 GWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG 714
GWA+TPGG+YSDAGTPRDS S Y NAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG
Sbjct: 859 GWANTPGGSYSDAGTPRDSGSAYANAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG 918
Query: 715 TGGLDAMSPVIGADNEGPWFMPDILV--RRSGEESVVGVIREVLPDGSCRVVLGSSGNGD 772
TGGLD MSPVIG D EGPW+MPDILV RRSG++ ++GVIREVLPDGSCR+ LGSSGNG+
Sbjct: 919 TGGLDMMSPVIGGDTEGPWYMPDILVNYRRSGDDPIMGVIREVLPDGSCRIGLGSSGNGE 978
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
T+TA +E+E++ PRK+DKIKIMGG RGATGKLIGVDGTDGIVKVD +LDVKILD+ IL
Sbjct: 979 TVTAPSSEVEVIVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTLDVKILDLVIL 1038
Query: 833 AKLAQP 838
AKLAQP
Sbjct: 1039 AKLAQP 1044
>gi|224105299|ref|XP_002313759.1| global transcription factor group [Populus trichocarpa]
gi|222850167|gb|EEE87714.1| global transcription factor group [Populus trichocarpa]
Length = 1042
Score = 1462 bits (3784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/848 (85%), Positives = 776/848 (91%), Gaps = 24/848 (2%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
MQK IDKGSELQIRSV+ALDHLKNYIYIEADKEAHV+EACKGLRNI+ QK+MLVPIREMT
Sbjct: 207 MQKYIDKGSELQIRSVVALDHLKNYIYIEADKEAHVREACKGLRNIFGQKIMLVPIREMT 266
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 120
DVL+VESK IDLSRDTWVRMKIG YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE
Sbjct: 267 DVLSVESKVIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 326
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
GRE KKK FVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM
Sbjct: 327 GREAPKKKAFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 386
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 240
KSISAQNI+P+FDELEKFR+PGENG+ D+ASLSTLFANRKKGHFMKGDAVIV+KGDLK+L
Sbjct: 387 KSISAQNIKPSFDELEKFRSPGENGDGDVASLSTLFANRKKGHFMKGDAVIVVKGDLKSL 446
Query: 241 KGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
KGWVEKVDEENVHIRPEMKGLPKTLAVN KELCKYFEPGNHVKVVSGT G TGMV+KVE
Sbjct: 447 KGWVEKVDEENVHIRPEMKGLPKTLAVNEKELCKYFEPGNHVKVVSGTHEGVTGMVVKVE 506
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
QH IRVFADDVVESSEVTTG+TKIGDYEL DLVLLDN SFG+IIRVESE
Sbjct: 507 QH------------IRVFADDVVESSEVTTGVTKIGDYELHDLVLLDNMSFGLIIRVESE 554
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
AFQVLKGV +R EVALV+LREIKCK+EKK+NVQDR KNTV+VKDVVRI++GPCKGKQGPV
Sbjct: 555 AFQVLKGVTERAEVALVRLREIKCKIEKKTNVQDRYKNTVSVKDVVRIIDGPCKGKQGPV 614
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
EHIYRG+LFI+DRHHLEHAG+ICAKS SC+V+GGSR+NGDRNGD+YSR S +T PR+P
Sbjct: 615 EHIYRGVLFIYDRHHLEHAGYICAKSHSCIVIGGSRSNGDRNGDSYSRLGSFKT-PRVPP 673
Query: 481 SPGRYSRGGPP--AGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELE 538
SP R+ RGGPP +GGRNRGGRGGHDALVGTT+KVR GP+KGYRGRVVD+KGQ VRVELE
Sbjct: 674 SPRRFPRGGPPFDSGGRNRGGRGGHDALVGTTIKVRQGPFKGYRGRVVDIKGQFVRVELE 733
Query: 539 SQMKVVT-------VDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRD 591
SQMKVVT VDRS ISDNVVVSTPYRD PRYGMGSETPMHPSRTPL PYMTPMRD
Sbjct: 734 SQMKVVTGKYSSMSVDRSHISDNVVVSTPYRDAPRYGMGSETPMHPSRTPLRPYMTPMRD 793
Query: 592 AGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPT 651
+GATPIHDGMRTPMRDRAWNPY PMSPPRDNWEDGNPGSWGTSPQYQPGSPPS YEAPT
Sbjct: 794 SGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSGTYEAPT 853
Query: 652 PGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPM 711
PGSGWASTPGGNYS+AGTPRDSSS Y NAPSPYLPSTPGGQPMTP+SASYLPGTPGGQ M
Sbjct: 854 PGSGWASTPGGNYSEAGTPRDSSSAYANAPSPYLPSTPGGQPMTPSSASYLPGTPGGQLM 913
Query: 712 TPGTGGLDAMSPVIGADNEGPWFMPDIL--VRRSGEESVVGVIREVLPDGSCRVVLGSSG 769
TPGT GLD MSPVIG D EGPWF+PDIL V R+ +ES VGVIREVL DGSC++VLG+ G
Sbjct: 914 TPGTNGLDMMSPVIGGDGEGPWFIPDILVTVHRTADESAVGVIREVLQDGSCKIVLGAHG 973
Query: 770 NGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDM 829
NG+TITALP+EIE+V PRK+DKIKI+GG HRGATGKLIGVDGTDGIVK++ +LDVKILDM
Sbjct: 974 NGETITALPSEIEMVVPRKSDKIKILGGAHRGATGKLIGVDGTDGIVKLEDTLDVKILDM 1033
Query: 830 AILAKLAQ 837
ILAKLAQ
Sbjct: 1034 VILAKLAQ 1041
>gi|356509328|ref|XP_003523402.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like [Glycine max]
Length = 1050
Score = 1454 bits (3765), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/840 (85%), Positives = 771/840 (91%), Gaps = 6/840 (0%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
MQK IDKGSELQIRS IALDHLKNYIY+EADKEAHV+EACKGLRNI+ QK+ LVPIREMT
Sbjct: 215 MQKYIDKGSELQIRSAIALDHLKNYIYVEADKEAHVREACKGLRNIFGQKITLVPIREMT 274
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 120
DVL+VESKAIDL+RDTWVR+KIG YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE
Sbjct: 275 DVLSVESKAIDLARDTWVRLKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 334
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
GREV KKK FVPPPRFMNVDEARELHIRVE RRD G+ F+ IGGM+FKDGFLYKTVS+
Sbjct: 335 GREVVKKKAFVPPPRFMNVDEARELHIRVEHRRDAY-GERFDAIGGMMFKDGFLYKTVSI 393
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 240
KSISAQNI+PTFDELEKFR PGE+G+ D+ASLSTLFANRKKGHFMKGDAVIV+KGDLKNL
Sbjct: 394 KSISAQNIKPTFDELEKFRKPGESGDGDVASLSTLFANRKKGHFMKGDAVIVVKGDLKNL 453
Query: 241 KGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
KG VEKVDE+NVHIRPEM+ LPKT+AVN KELCKYFEPGNHVKVVSG Q GATGMV+KVE
Sbjct: 454 KGKVEKVDEDNVHIRPEMEDLPKTIAVNEKELCKYFEPGNHVKVVSGAQEGATGMVVKVE 513
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
QHVLI++SDTTKE IRVFADDVVESSEVTTG+T+IGDYELRDLVLLDNNSFGVIIRVESE
Sbjct: 514 QHVLILISDTTKEHIRVFADDVVESSEVTTGVTRIGDYELRDLVLLDNNSFGVIIRVESE 573
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
AFQVLKG+PDRPEV LVKLREIKCK++KK +VQDR KNTV+ KDVVRI++GPCKGKQGPV
Sbjct: 574 AFQVLKGIPDRPEVVLVKLREIKCKIDKKISVQDRFKNTVSSKDVVRIIDGPCKGKQGPV 633
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
EHIYRGILFI DRHHLEHAGFICAK+ SCVVVGGSR++GDRNGDAYSRF SLR+P RIP
Sbjct: 634 EHIYRGILFIFDRHHLEHAGFICAKAQSCVVVGGSRSSGDRNGDAYSRFASLRSPSRIPP 693
Query: 481 SPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQ 540
SP R+SRGGP G G GHD+L GTTVKVR GPYKGYRGRV+DVKG +VRVELESQ
Sbjct: 694 SPRRFSRGGPMDSGGRHRGGRGHDSLAGTTVKVRQGPYKGYRGRVIDVKGTTVRVELESQ 753
Query: 541 MKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDG 600
MKVVTVDR+ ISDNV V TPYRDT RYGMGSETPMHPSRTPLHPYMTPMRD GATPIHDG
Sbjct: 754 MKVVTVDRNHISDNVAV-TPYRDTSRYGMGSETPMHPSRTPLHPYMTPMRDPGATPIHDG 812
Query: 601 MRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTP 660
MRTPMRD AWNPYTPMSPPRDNWEDGNPGSW SPQYQPGSPPSR YEAPTPG+GWASTP
Sbjct: 813 MRTPMRDPAWNPYTPMSPPRDNWEDGNPGSWAASPQYQPGSPPSRPYEAPTPGAGWASTP 872
Query: 661 GGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDA 720
GGNYS+AGTPRDSS+ Y NAPSPYLPSTPGGQPMTP+SASYLPGTPGGQPMTPGTGG+D
Sbjct: 873 GGNYSEAGTPRDSSA-YANAPSPYLPSTPGGQPMTPSSASYLPGTPGGQPMTPGTGGMDM 931
Query: 721 MSPVIGADNEGPWFMPDIL--VRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALP 778
MSPV+G +NEGPWF+PDIL V R+GEES VGVIREVLPDGS RV LGSSGNG+ ITALP
Sbjct: 932 MSPVLGGENEGPWFIPDILVNVHRAGEES-VGVIREVLPDGSYRVALGSSGNGEAITALP 990
Query: 779 NEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQP 838
NE+E V PRK+DKIKIMGG RGATGKLIGVDGTDGIVKVD +LDVKILD+ ILAKLAQP
Sbjct: 991 NEMEAVVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTLDVKILDLVILAKLAQP 1050
>gi|356515975|ref|XP_003526672.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like [Glycine max]
Length = 1039
Score = 1453 bits (3761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/840 (85%), Positives = 771/840 (91%), Gaps = 6/840 (0%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
MQK IDKGSELQIRS IALDHLKNYIY+EADKEAHV+EACKGLRNI+ QK+ LVPIREMT
Sbjct: 204 MQKYIDKGSELQIRSAIALDHLKNYIYVEADKEAHVREACKGLRNIFGQKITLVPIREMT 263
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 120
DVL+VESKAIDL+RDTWVRMKIG YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE
Sbjct: 264 DVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 323
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
GREV KKK FVPPPRFMNVDEARELHIRVE RRD G+ F+ IGGM+FKDGFLYKTVS+
Sbjct: 324 GREVVKKKAFVPPPRFMNVDEARELHIRVEHRRDAY-GERFDAIGGMMFKDGFLYKTVSI 382
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 240
KSISAQNI+PTFDELEKFR PGE+G+ D+ASLSTLFANRKKGHFMKGDAVIVIKGDLKNL
Sbjct: 383 KSISAQNIKPTFDELEKFRKPGESGDGDVASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 442
Query: 241 KGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
KG VEKVDE+NVHIRPEM+ LPKT+AVN KELCKYFEPGNHVKVVSG Q GATGMV+KVE
Sbjct: 443 KGKVEKVDEDNVHIRPEMEDLPKTIAVNEKELCKYFEPGNHVKVVSGAQEGATGMVVKVE 502
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
QHVLI++SDTTKE IRVFADDVVESSEVTTG+T+IGDYELRDLVLLDNNSFGVIIRVESE
Sbjct: 503 QHVLILISDTTKEHIRVFADDVVESSEVTTGVTRIGDYELRDLVLLDNNSFGVIIRVESE 562
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
AFQVLKG+PDRPEV L+KLREIKCK++KK +VQDR KNTV+ KDVVRIV+GPCKGKQGPV
Sbjct: 563 AFQVLKGIPDRPEVVLIKLREIKCKIDKKISVQDRFKNTVSSKDVVRIVDGPCKGKQGPV 622
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
EHIYRGILFI DRHHLEHAGFICAK+ SCVVVGGSR++G+RNGDAYSRF SLR+P RIP
Sbjct: 623 EHIYRGILFIFDRHHLEHAGFICAKAQSCVVVGGSRSSGERNGDAYSRFASLRSPSRIPP 682
Query: 481 SPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQ 540
SP R+SRGGP G G GHD+L GTTVKVR GPYKGYRGRV+DVKG +VRVELESQ
Sbjct: 683 SPRRFSRGGPMDSGGRHRGGRGHDSLAGTTVKVRQGPYKGYRGRVIDVKGTTVRVELESQ 742
Query: 541 MKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDG 600
MKVVTVDR+ ISDNV V TPYRDT RYGMGSETPMHPSRTPLHPYMTPMRD GATPIHDG
Sbjct: 743 MKVVTVDRNHISDNVAV-TPYRDTSRYGMGSETPMHPSRTPLHPYMTPMRDPGATPIHDG 801
Query: 601 MRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTP 660
MRTPM RAWNPYTPMSPPRDNWEDGNPGSWG SPQYQPGSPPSR YEAPTPG+GWASTP
Sbjct: 802 MRTPMHSRAWNPYTPMSPPRDNWEDGNPGSWGASPQYQPGSPPSRPYEAPTPGAGWASTP 861
Query: 661 GGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDA 720
GGNYS+AGTPRDSS+ Y NAPSPYLPSTPGGQPMTP+SASYLPGTPGGQPMTPGTGG+D
Sbjct: 862 GGNYSEAGTPRDSSA-YANAPSPYLPSTPGGQPMTPSSASYLPGTPGGQPMTPGTGGMDM 920
Query: 721 MSPVIGADNEGPWFMPDIL--VRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALP 778
MSPV+G +NEGPWF+PDIL V R+GEES +GVIRE LPDGS RV LGSSGNG+TITALP
Sbjct: 921 MSPVLGGENEGPWFIPDILVNVHRAGEES-IGVIREALPDGSYRVGLGSSGNGETITALP 979
Query: 779 NEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQP 838
NE+E V PRK+DKIKIMGG RGATGKLIGVDGTDGIVKVD +LDVKILD+ ILAKLAQP
Sbjct: 980 NEMEAVVPRKSDKIKIMGGALRGATGKLIGVDGTDGIVKVDDTLDVKILDLVILAKLAQP 1039
>gi|359492305|ref|XP_002265283.2| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like isoform 1 [Vitis vinifera]
gi|302142757|emb|CBI19960.3| unnamed protein product [Vitis vinifera]
Length = 1034
Score = 1449 bits (3750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/842 (84%), Positives = 767/842 (91%), Gaps = 6/842 (0%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
MQK IDKG E+QIRS IALDHLKNYIYIEADKEAHVKEACKGLRNIY+QKVMLVPIREMT
Sbjct: 195 MQKSIDKGPEVQIRSAIALDHLKNYIYIEADKEAHVKEACKGLRNIYAQKVMLVPIREMT 254
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 120
DVL+VESKA+DLSR+TWVRMKIG YKGDLAKVVDVDNVRQRVTV+LIPRIDLQALANKLE
Sbjct: 255 DVLSVESKAVDLSRNTWVRMKIGTYKGDLAKVVDVDNVRQRVTVQLIPRIDLQALANKLE 314
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
GREV KK F PPPRFMNV+EARE+HIRVERRRDPMTGDYFENIGGM+FKDGFLYKTVSM
Sbjct: 315 GREVVTKKAFKPPPRFMNVEEAREMHIRVERRRDPMTGDYFENIGGMMFKDGFLYKTVSM 374
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 240
KSIS QNIQPTFDELEKFRTPGE + D+ASLSTLFANRKKGHFMKGDAVI++KGDLKNL
Sbjct: 375 KSISVQNIQPTFDELEKFRTPGETEDGDMASLSTLFANRKKGHFMKGDAVIIVKGDLKNL 434
Query: 241 KGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
KGWVEKV+EENVHIRPEMKGLPKTLAVN KELCKYFEPGNHVKVVSGTQ GATGMV+KVE
Sbjct: 435 KGWVEKVEEENVHIRPEMKGLPKTLAVNEKELCKYFEPGNHVKVVSGTQEGATGMVVKVE 494
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
HVLIILSDTTKE +RVFADDVVESSEVT+G+T+IGDYEL DLVLLDN SFGVIIRVESE
Sbjct: 495 GHVLIILSDTTKEHLRVFADDVVESSEVTSGVTRIGDYELHDLVLLDNLSFGVIIRVESE 554
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
AFQVLKGVPDRPEV LVKLREIK K++K+ NVQDR KNTV+VKDVVRI++GPCKGKQGPV
Sbjct: 555 AFQVLKGVPDRPEVVLVKLREIKFKIDKRVNVQDRFKNTVSVKDVVRILDGPCKGKQGPV 614
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
EHIY+G+LFI+DRHHLEHAGFICAKS SCVVVGGSR+N DR+GD++SRF +LRTPPR+P+
Sbjct: 615 EHIYKGVLFIYDRHHLEHAGFICAKSHSCVVVGGSRSNADRSGDSFSRFANLRTPPRVPE 674
Query: 481 SPGRYSRGGPPA-GGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELES 539
SP R+ RGG P G G GHD+L+G+T+K+R GP+KGYRGRVVDV GQSVRVELES
Sbjct: 675 SPRRFPRGGRPMDSGGRHRGGRGHDSLIGSTIKIRQGPFKGYRGRVVDVNGQSVRVELES 734
Query: 540 QMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHD 599
QMKVVTVDR+ ISDNV V+TPYRD PRYGMGSETPMHPSRTPLHPYMTPMRD GATPIHD
Sbjct: 735 QMKVVTVDRNQISDNVAVATPYRDAPRYGMGSETPMHPSRTPLHPYMTPMRDVGATPIHD 794
Query: 600 GMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW-GTSPQYQPGSPPSRAYEAPTPGSGWAS 658
GMRTPMRDRAWNPY PMSPPRDNWE+GNP SW TSPQYQPGSPPSR YEAPTPGSGWAS
Sbjct: 795 GMRTPMRDRAWNPYAPMSPPRDNWEEGNPDSWVTTSPQYQPGSPPSRTYEAPTPGSGWAS 854
Query: 659 TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGL 718
TPGGNYS+AGTPRDS+ Y N PSPYLPSTPGGQPMTPNS SYLPGTPGGQPMTPGT G+
Sbjct: 855 TPGGNYSEAGTPRDSTPAYANVPSPYLPSTPGGQPMTPNSVSYLPGTPGGQPMTPGT-GV 913
Query: 719 DAMSPVIGADNEGPWFMPDILV--RRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITA 776
D MSP IG + EGPWFMPDILV RR GEE+ +GVIREVLPDG+ RV LGSSG G+ +T
Sbjct: 914 DVMSP-IGGEQEGPWFMPDILVHIRRPGEENTLGVIREVLPDGTYRVGLGSSGGGEIVTV 972
Query: 777 LPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLA 836
L EI+ V PRK+DKIKIMGG HRGATGKLIGVDGTDGIVKVD +LDVKILDM +LAKL
Sbjct: 973 LHAEIDAVAPRKSDKIKIMGGAHRGATGKLIGVDGTDGIVKVDDTLDVKILDMVLLAKLV 1032
Query: 837 QP 838
QP
Sbjct: 1033 QP 1034
>gi|359492307|ref|XP_003634397.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like isoform 2 [Vitis vinifera]
Length = 1044
Score = 1440 bits (3728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/852 (83%), Positives = 766/852 (89%), Gaps = 16/852 (1%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
MQK IDKG E+QIRS IALDHLKNYIYIEADKEAHVKEACKGLRNIY+QKVMLVPIREMT
Sbjct: 195 MQKSIDKGPEVQIRSAIALDHLKNYIYIEADKEAHVKEACKGLRNIYAQKVMLVPIREMT 254
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 120
DVL+VESKA+DLSR+TWVRMKIG YKGDLAKVVDVDNVRQRVTV+LIPRIDLQALANKLE
Sbjct: 255 DVLSVESKAVDLSRNTWVRMKIGTYKGDLAKVVDVDNVRQRVTVQLIPRIDLQALANKLE 314
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
GREV KK F PPPRFMNV+EARE+HIRVERRRDPMTGDYFENIGGM+FKDGFLYKTVSM
Sbjct: 315 GREVVTKKAFKPPPRFMNVEEAREMHIRVERRRDPMTGDYFENIGGMMFKDGFLYKTVSM 374
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 240
KSIS QNIQPTFDELEKFRTPGE + D+ASLSTLFANRKKGHFMKGDAVI++KGDLKNL
Sbjct: 375 KSISVQNIQPTFDELEKFRTPGETEDGDMASLSTLFANRKKGHFMKGDAVIIVKGDLKNL 434
Query: 241 KGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
KGWVEKV+EENVHIRPEMKGLPKTLAVN KELCKYFEPGNHVKVVSGTQ GATGMV+KVE
Sbjct: 435 KGWVEKVEEENVHIRPEMKGLPKTLAVNEKELCKYFEPGNHVKVVSGTQEGATGMVVKVE 494
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
HVLIILSDTTKE +RVFADDVVESSEVT+G+T+IGDYEL DLVLLDN SFGVIIRVESE
Sbjct: 495 GHVLIILSDTTKEHLRVFADDVVESSEVTSGVTRIGDYELHDLVLLDNLSFGVIIRVESE 554
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
AFQVLKGVPDRPEV LVKLREIK K++K+ NVQDR KNTV+VKDVVRI++GPCKGKQGPV
Sbjct: 555 AFQVLKGVPDRPEVVLVKLREIKFKIDKRVNVQDRFKNTVSVKDVVRILDGPCKGKQGPV 614
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
EHIY+G+LFI+DRHHLEHAGFICAKS SCVVVGGSR+N DR+GD++SRF +LRTPPR+P+
Sbjct: 615 EHIYKGVLFIYDRHHLEHAGFICAKSHSCVVVGGSRSNADRSGDSFSRFANLRTPPRVPE 674
Query: 481 SPGRYSRGGPPA-GGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELES 539
SP R+ RGG P G G GHD+L+G+T+K+R GP+KGYRGRVVDV GQSVRVELES
Sbjct: 675 SPRRFPRGGRPMDSGGRHRGGRGHDSLIGSTIKIRQGPFKGYRGRVVDVNGQSVRVELES 734
Query: 540 QMKVVT----------VDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPM 589
QMKVVT DR+ ISDNV V+TPYRD PRYGMGSETPMHPSRTPLHPYMTPM
Sbjct: 735 QMKVVTGKSYLVLKNLFDRNQISDNVAVATPYRDAPRYGMGSETPMHPSRTPLHPYMTPM 794
Query: 590 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW-GTSPQYQPGSPPSRAYE 648
RD GATPIHDGMRTPMRDRAWNPY PMSPPRDNWE+GNP SW TSPQYQPGSPPSR YE
Sbjct: 795 RDVGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEEGNPDSWVTTSPQYQPGSPPSRTYE 854
Query: 649 APTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGG 708
APTPGSGWASTPGGNYS+AGTPRDS+ Y N PSPYLPSTPGGQPMTPNS SYLPGTPGG
Sbjct: 855 APTPGSGWASTPGGNYSEAGTPRDSTPAYANVPSPYLPSTPGGQPMTPNSVSYLPGTPGG 914
Query: 709 QPMTPGTGGLDAMSPVIGADNEGPWFMPDILV--RRSGEESVVGVIREVLPDGSCRVVLG 766
QPMTPGT G+D MSP IG + EGPWFMPDILV RR GEE+ +GVIREVLPDG+ RV LG
Sbjct: 915 QPMTPGT-GVDVMSP-IGGEQEGPWFMPDILVHIRRPGEENTLGVIREVLPDGTYRVGLG 972
Query: 767 SSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKI 826
SSG G+ +T L EI+ V PRK+DKIKIMGG HRGATGKLIGVDGTDGIVKVD +LDVKI
Sbjct: 973 SSGGGEIVTVLHAEIDAVAPRKSDKIKIMGGAHRGATGKLIGVDGTDGIVKVDDTLDVKI 1032
Query: 827 LDMAILAKLAQP 838
LDM +LAKL QP
Sbjct: 1033 LDMVLLAKLVQP 1044
>gi|357463691|ref|XP_003602127.1| Global transcription factor group [Medicago truncatula]
gi|355491175|gb|AES72378.1| Global transcription factor group [Medicago truncatula]
Length = 1040
Score = 1420 bits (3676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 711/843 (84%), Positives = 763/843 (90%), Gaps = 11/843 (1%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
MQK IDKGSELQIRS IALDHLKNYIY+EADKEAHV+EACKGLRNI+ QK+ LVPIREMT
Sbjct: 204 MQKYIDKGSELQIRSAIALDHLKNYIYVEADKEAHVREACKGLRNIFGQKITLVPIREMT 263
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 120
DVL+VESKAIDL+RDTWVRMKIG YKGDLAKVVDVDNVRQRV VKLIPRIDLQALANKLE
Sbjct: 264 DVLSVESKAIDLARDTWVRMKIGTYKGDLAKVVDVDNVRQRVRVKLIPRIDLQALANKLE 323
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
GREV KKK FVPPPRFMNV+EARELHIRVE RRD G+ F+ IGGM+FKDGFLYK+VS+
Sbjct: 324 GREVVKKKAFVPPPRFMNVEEARELHIRVEHRRDATGGERFDTIGGMMFKDGFLYKSVSI 383
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 240
KS+ +QNI+PTFDELEKFR PGE G D+ASLSTLFANRKKGHFMKGDAVIVIKGDLKNL
Sbjct: 384 KSLYSQNIKPTFDELEKFRKPGETG--DVASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 441
Query: 241 KGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
KGWVEKVDE+NVHIRPEMK LPKTLAVN KELCKYFEPGNHVKVVSG Q GATGMV+KVE
Sbjct: 442 KGWVEKVDEDNVHIRPEMKDLPKTLAVNEKELCKYFEPGNHVKVVSGAQEGATGMVVKVE 501
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
QHVLI++SDTTKE IR FADDVVESSEVTTG+TKIGDYELRDLVLLDN+SFGVIIRVESE
Sbjct: 502 QHVLILISDTTKEHIRAFADDVVESSEVTTGVTKIGDYELRDLVLLDNSSFGVIIRVESE 561
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
AFQVLKGV DRPEV LVKLREIKCKLEKK NVQD+ +NTV+ KDVVRI+EGPCKG QG V
Sbjct: 562 AFQVLKGVTDRPEVVLVKLREIKCKLEKKINVQDKFRNTVSSKDVVRILEGPCKGNQGSV 621
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
EHIYRG+LF+ DRHHLEHAGF+C K+ SCVVVGGSR+N DRNGD +SRF LRTPPRIPQ
Sbjct: 622 EHIYRGVLFVFDRHHLEHAGFMCVKAQSCVVVGGSRSNSDRNGDVHSRFPGLRTPPRIPQ 681
Query: 481 SPGRYSRGGPP-AGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELES 539
SP R+SRGGPP AGGR+ G GHD L G TVKVR G YKGYRGRV++VKG VRVELES
Sbjct: 682 SPHRFSRGGPPSAGGRHNRGGRGHDGLTGATVKVRQGSYKGYRGRVIEVKGSFVRVELES 741
Query: 540 QMKVVTVDRSMISDNVVVSTPYRDT-PRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIH 598
QMKVVTVDR+ ISDNV V TP R+T RYGMGSETPMHPSRTPLHPYMTPMRDAGATPIH
Sbjct: 742 QMKVVTVDRNHISDNVAV-TPQRETSSRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIH 800
Query: 599 DGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWAS 658
DGMRTPMRDRAWNPY PMSPPRDNWEDGNPGSWG SPQYQPGSPPSR YEAPTPG+GWAS
Sbjct: 801 DGMRTPMRDRAWNPYAPMSPPRDNWEDGNPGSWGASPQYQPGSPPSRPYEAPTPGAGWAS 860
Query: 659 TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGL 718
TPGGNYS+AGTPRDSS+ Y NAPSPYLPSTP GQPMTPNSASYLPGTPGGQPMTPGTGGL
Sbjct: 861 TPGGNYSEAGTPRDSSA-YANAPSPYLPSTP-GQPMTPNSASYLPGTPGGQPMTPGTGGL 918
Query: 719 DAMSPVIGADNEGPWFMPDIL--VRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITA 776
D MSPV+G DNEGPWFMPDIL V R+GEES VGVI+EVLPDGS RV LGS+GNG+TI+A
Sbjct: 919 DIMSPVLGGDNEGPWFMPDILVNVHRAGEES-VGVIKEVLPDGSYRVALGSNGNGETISA 977
Query: 777 LPNEIEIVPPRKTDKIKIM-GGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
L NE+E V PRK+DKIKIM GG RG+TGKLIGVDGTDGIVKVD +LDVKILD+ ILAKL
Sbjct: 978 LSNEVEAVVPRKSDKIKIMGGGTLRGSTGKLIGVDGTDGIVKVDDTLDVKILDLVILAKL 1037
Query: 836 AQP 838
AQP
Sbjct: 1038 AQP 1040
>gi|147838939|emb|CAN68098.1| hypothetical protein VITISV_043874 [Vitis vinifera]
Length = 1107
Score = 1391 bits (3600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 690/852 (80%), Positives = 747/852 (87%), Gaps = 37/852 (4%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
MQK IDKG E+QIRS IALDHLKNYIYIEADKEAHVKEACKGLRNIY+QKVMLVPIREMT
Sbjct: 195 MQKSIDKGPEVQIRSAIALDHLKNYIYIEADKEAHVKEACKGLRNIYAQKVMLVPIREMT 254
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 120
DVL+VESKA+DLSR+TWVRMKIG YKGDLAKVVDVDNVRQRVTV+LIPRIDLQALANKLE
Sbjct: 255 DVLSVESKAVDLSRNTWVRMKIGTYKGDLAKVVDVDNVRQRVTVQLIPRIDLQALANKLE 314
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
GREV KK F PPPRFMNV+EARE+HIRVERRRDPMTGDYFENIGGM+FKDGFLYKTVSM
Sbjct: 315 GREVVTKKAFKPPPRFMNVEEAREMHIRVERRRDPMTGDYFENIGGMMFKDGFLYKTVSM 374
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 240
KSIS QNIQPTFDELEKFRTPGE + D+ASLSTLFANRKKGHFMKGDAVI++KGDLKNL
Sbjct: 375 KSISVQNIQPTFDELEKFRTPGETEDGDMASLSTLFANRKKGHFMKGDAVIIVKGDLKNL 434
Query: 241 KGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
KGWVEKV+EENVHIRPEMKGLPKTLAVN KELCKYFEPGNHVKVVSGTQ GATGMV+KVE
Sbjct: 435 KGWVEKVEEENVHIRPEMKGLPKTLAVNEKELCKYFEPGNHVKVVSGTQEGATGMVVKVE 494
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
HVLIILSDTTKE +RVFADDVVESSEVT+G+T+IGDYEL DLVLLDN SFGVIIRVESE
Sbjct: 495 GHVLIILSDTTKEHLRVFADDVVESSEVTSGVTRIGDYELHDLVLLDNLSFGVIIRVESE 554
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
AFQVLKGVPDRPEV LVKLREIK K++K+ NVQDR KNTV+VKDVVRI++GPCKGKQGPV
Sbjct: 555 AFQVLKGVPDRPEVVLVKLREIKFKIDKRVNVQDRFKNTVSVKDVVRILDGPCKGKQGPV 614
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
EHIY+G+LFI+DRHHLEHAGFICAKS SCVVVGGSR+N DR+GD++SRF +LRTPPR+P+
Sbjct: 615 EHIYKGVLFIYDRHHLEHAGFICAKSHSCVVVGGSRSNADRSGDSFSRFANLRTPPRVPE 674
Query: 481 SPGRYSRGGPPA-GGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELES 539
SP R+ RGG P G G GHD+L+G+T+K+R GP+KGYRGRVVDV GQSVRVELES
Sbjct: 675 SPRRFPRGGRPMDSGGRHRGGRGHDSLIGSTIKIRQGPFKGYRGRVVDVNGQSVRVELES 734
Query: 540 QMK---------VVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMR 590
QMK + VDR+ ISDNV V+TPYRD PRYGMGSETPMHPSRTPLHPYMTPMR
Sbjct: 735 QMKFPDWMMTAFICAVDRNQISDNVAVATPYRDAPRYGMGSETPMHPSRTPLHPYMTPMR 794
Query: 591 DAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW-GTSPQYQPGSPPSRAYEA 649
D GATPIHDGMRTPMRDRAWNPY PMSPPRDNWE+GNP SW TSPQYQPGSPPSR YEA
Sbjct: 795 DVGATPIHDGMRTPMRDRAWNPYAPMSPPRDNWEEGNPDSWVXTSPQYQPGSPPSRTYEA 854
Query: 650 PTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQ 709
PTPGSGWASTPGGNYS+AGTPRDS+ Y N PSPYLPSTPGGQPMTPNS SYLPGTPGGQ
Sbjct: 855 PTPGSGWASTPGGNYSEAGTPRDSTPAYANVPSPYLPSTPGGQPMTPNSVSYLPGTPGGQ 914
Query: 710 PMTPGTGGLDAMSPVIGADNEGPWFMPDILV--RRSGEESVVGVIREVLP---------- 757
PMTPGT G+D MSP IG + EGPWFMPDILV RR GEE+ +GVIREVLP
Sbjct: 915 PMTPGT-GVDVMSP-IGGEQEGPWFMPDILVHIRRPGEENTLGVIREVLPHASGMGIFHW 972
Query: 758 ------------DGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGK 805
DG+ RV LGSSG G+ +T L EI+ V PRK+DKIKIMGG HRGATGK
Sbjct: 973 LSGSINKCFVVQDGTYRVGLGSSGGGEIVTVLHAEIDAVAPRKSDKIKIMGGAHRGATGK 1032
Query: 806 LIGVDGTDGIVK 817
LIGVDGTDGIVK
Sbjct: 1033 LIGVDGTDGIVK 1044
>gi|334186403|ref|NP_192575.3| global transcription factor group A2 [Arabidopsis thaliana]
gi|374095445|sp|Q9STN3.2|SPT51_ARATH RecName: Full=Putative transcription elongation factor SPT5 homolog 1
gi|332657229|gb|AEE82629.1| global transcription factor group A2 [Arabidopsis thaliana]
Length = 1041
Score = 1355 bits (3506), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 674/847 (79%), Positives = 751/847 (88%), Gaps = 16/847 (1%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS-QKVMLVPIREM 59
MQK ID+G++LQIRSV+ALDHLKN+IY+EADKEAHVKEA KG+RNIY+ QK++LVPIREM
Sbjct: 202 MQKFIDRGADLQIRSVVALDHLKNFIYVEADKEAHVKEAIKGMRNIYANQKILLVPIREM 261
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
TDVL+VESKAIDLSRDTWVRMKIG YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA+KL
Sbjct: 262 TDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALASKL 321
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
+GREV+KKK FVPPPRFMN+DEARELHIRVERRRD MTGDYFENIGGMLFKDGF YK VS
Sbjct: 322 DGREVSKKKAFVPPPRFMNIDEARELHIRVERRRDHMTGDYFENIGGMLFKDGFHYKQVS 381
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
+KSI+ QN+ PTFDELEKF P ENGE D LSTLFANRKKGHFMKGDAVIVIKGDLKN
Sbjct: 382 LKSITVQNVTPTFDELEKFNKPSENGEGDFGGLSTLFANRKKGHFMKGDAVIVIKGDLKN 441
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
LKGWVEKVDEENV IR E+KGLP LAVN +ELCKYFEPGNHVKVVSGT GATGMV+KV
Sbjct: 442 LKGWVEKVDEENVLIRSEVKGLPDPLAVNERELCKYFEPGNHVKVVSGTHEGATGMVVKV 501
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
+QHVLIILSDTTKE +RVFAD VVESSEVTTG+TKIGDYEL DLVLLDN SFGVIIR+E+
Sbjct: 502 DQHVLIILSDTTKEHVRVFADHVVESSEVTTGVTKIGDYELHDLVLLDNLSFGVIIRLEN 561
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
EAFQVLKGVPDRPEVALVKLREIKCKLEKK NVQDR KN +AVKD VR++EGP KGKQGP
Sbjct: 562 EAFQVLKGVPDRPEVALVKLREIKCKLEKKINVQDRYKNVIAVKDDVRVIEGPSKGKQGP 621
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN-GDAYSRFNSLRTPPRI 478
V+HIY+G+LFI+DRHHLEHAGFICAK +SC+VVGGSR+ +RN GD+ SR+ + + P +
Sbjct: 622 VKHIYKGVLFIYDRHHLEHAGFICAKCTSCIVVGGSRSGANRNGGDSLSRYGNFKAPAPV 681
Query: 479 PQSPGRYSRGGPPAGGRN-----RGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSV 533
P SPGR+ RG + G G D+L+GTTVK+RLGP+KGYRG VV+VKG SV
Sbjct: 682 PSSPGRFQRGRGGGYNNSGGRHGGGRGRGDDSLLGTTVKIRLGPFKGYRGPVVEVKGNSV 741
Query: 534 RVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAG 593
RVELE MK+VTVDR ISDN V +TP+RDT RY MGSETPMHPSRTPLHPYMTPMRD+G
Sbjct: 742 RVELE--MKIVTVDRGAISDN-VATTPFRDTSRYSMGSETPMHPSRTPLHPYMTPMRDSG 798
Query: 594 ATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPG 653
ATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPG
Sbjct: 799 ATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPG 858
Query: 654 SGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTP 713
SGWASTPGG+YSDAGTPRD S Y NAPSPYLPSTP GQPMTP+SASYLPGTPGGQPMTP
Sbjct: 859 SGWASTPGGSYSDAGTPRDHGSAYANAPSPYLPSTP-GQPMTPSSASYLPGTPGGQPMTP 917
Query: 714 GTGGLDAMSPVIGADNEGPWFMPDILV--RRSGEESVVGVIREVLPDGSCRVVLGSSGNG 771
GT GLD MSPVIG D E WFMPDILV ++GE++ VGVIR+V DG+C+V LGSSG G
Sbjct: 918 GT-GLDVMSPVIGGDAEA-WFMPDILVDIHKAGEDTDVGVIRDV-SDGTCKVSLGSSGEG 974
Query: 772 DTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAI 831
DTI ALP+E+EI+PPRK+D++KI+GG +RG+TGKLIG+DG+DGIVK+D +LDVKILD+A+
Sbjct: 975 DTIMALPSELEIIPPRKSDRVKIVGGQYRGSTGKLIGIDGSDGIVKIDDNLDVKILDLAL 1034
Query: 832 LAKLAQP 838
LAK QP
Sbjct: 1035 LAKFVQP 1041
>gi|297809015|ref|XP_002872391.1| hypothetical protein ARALYDRAFT_327088 [Arabidopsis lyrata subsp.
lyrata]
gi|297318228|gb|EFH48650.1| hypothetical protein ARALYDRAFT_327088 [Arabidopsis lyrata subsp.
lyrata]
Length = 1051
Score = 1303 bits (3373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 662/871 (76%), Positives = 735/871 (84%), Gaps = 51/871 (5%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS-QKVMLVPIREM 59
MQK ID+G++LQIRSV+ALDHLKNYIY+EADKEAHVKEA KG+RNIYS QK++LVPIREM
Sbjct: 199 MQKFIDRGADLQIRSVVALDHLKNYIYVEADKEAHVKEAIKGMRNIYSNQKILLVPIREM 258
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
TDVL+VESKAIDLSRDTWVRMKIG YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA+KL
Sbjct: 259 TDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALASKL 318
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
+GREV+KKK FVPPPRFMN+DEARELHIRVERRRD MTGDYFENIGGMLFKDGFLYKTVS
Sbjct: 319 DGREVSKKKAFVPPPRFMNIDEARELHIRVERRRDHMTGDYFENIGGMLFKDGFLYKTVS 378
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
+KSI+ QN+ PTFDELEKF P ENGE D LSTLFANRKKGHFMKGDAVIVIKGDLKN
Sbjct: 379 LKSITVQNVTPTFDELEKFNKPSENGEGDFGGLSTLFANRKKGHFMKGDAVIVIKGDLKN 438
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
LKGWVEKVDEENV IR EMKGLP LAVN +ELCKYFEPGNHVKVVSGT GATGMV+KV
Sbjct: 439 LKGWVEKVDEENVLIRSEMKGLPDPLAVNERELCKYFEPGNHVKVVSGTHEGATGMVVKV 498
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
+QHV RVFAD VVESSEVTTG+TKIGDYEL DLVLLDN SFGVIIR+E+
Sbjct: 499 DQHV------------RVFADHVVESSEVTTGVTKIGDYELHDLVLLDNLSFGVIIRLEN 546
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
EAFQVLKGVPDRPEVALVKLREIKCK+EKK NVQDR KN +AVKD VR++EGP KGKQGP
Sbjct: 547 EAFQVLKGVPDRPEVALVKLREIKCKIEKKINVQDRYKNVIAVKDDVRVIEGPSKGKQGP 606
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN-GDAYSRFNSLRTPPRI 478
V+HIY+G+LFI+DRHHLEHAGFICAK +SC+VVGGSR+ +RN GD++SR+ + + P +
Sbjct: 607 VKHIYKGVLFIYDRHHLEHAGFICAKCTSCIVVGGSRSGANRNGGDSFSRYGNFKAPAPV 666
Query: 479 PQSPGRYSRGGPPAGGRN-----RGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSV 533
P SPGR+ RG + G G D+L+GTTVK+RLGP+KGYRG VV+VKG SV
Sbjct: 667 PSSPGRFQRGRGGGYNNSGGRHVGGRGRGDDSLLGTTVKIRLGPFKGYRGPVVEVKGNSV 726
Query: 534 RVELESQMKVVTVDRSMISDNVVVSTPYR------------------------DTPRYGM 569
RVELE MK+VT + VST R DT RY M
Sbjct: 727 RVELE--MKIVTGKLLNSLFRMWVSTCRRNFNNSLYMQLIGMQYQIMLRQHPLDTSRYSM 784
Query: 570 GSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPG 629
GSETPMHPSRTPLHPYMTPMRD+GATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPG
Sbjct: 785 GSETPMHPSRTPLHPYMTPMRDSGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPG 844
Query: 630 SWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTP 689
SWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGG+YSDAGTPRD S Y NAPSPYLPSTP
Sbjct: 845 SWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGSYSDAGTPRDHGSAYANAPSPYLPSTP 904
Query: 690 GGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDIL--VRRSGEES 747
GQPMTP+SASYLPGTPGGQPMTPGT GLD MSPVIG D E WFMPDIL V ++GE+S
Sbjct: 905 -GQPMTPSSASYLPGTPGGQPMTPGT-GLDVMSPVIGGDAEA-WFMPDILVDVHKAGEDS 961
Query: 748 VVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLI 807
VGVIR+V DG+C+V LGSSG GDTI ALP+E+EI+PPRK+D++KI+GG +RG+TGKLI
Sbjct: 962 DVGVIRDV-SDGTCKVSLGSSGEGDTIMALPSELEIIPPRKSDRVKIVGGQYRGSTGKLI 1020
Query: 808 GVDGTDGIVKVDVSLDVKILDMAILAKLAQP 838
G+DG+DGIVK+D +LDVKILD+A+LAK QP
Sbjct: 1021 GIDGSDGIVKIDDNLDVKILDLALLAKFVQP 1051
>gi|5731756|emb|CAB52557.1| putative protein [Arabidopsis thaliana]
gi|7267476|emb|CAB77960.1| putative protein [Arabidopsis thaliana]
Length = 1054
Score = 1292 bits (3344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 655/871 (75%), Positives = 734/871 (84%), Gaps = 51/871 (5%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS-QKVMLVPIREM 59
MQK ID+G++LQIRSV+ALDHLKN+IY+EADKEAHVKEA KG+RNIY+ QK++LVPIREM
Sbjct: 202 MQKFIDRGADLQIRSVVALDHLKNFIYVEADKEAHVKEAIKGMRNIYANQKILLVPIREM 261
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
TDVL+VESKAIDLSRDTWVRMKIG YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA+KL
Sbjct: 262 TDVLSVESKAIDLSRDTWVRMKIGTYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALASKL 321
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
+GREV+KKK FVPPPRFMN+DEARELHIRVERRRD MTGDYFENIGGMLFKDGF YK VS
Sbjct: 322 DGREVSKKKAFVPPPRFMNIDEARELHIRVERRRDHMTGDYFENIGGMLFKDGFHYKQVS 381
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
+KSI+ QN+ PTFDELEKF P ENGE D LSTLFANRKKGHFMKGDAVIVIKGDLKN
Sbjct: 382 LKSITVQNVTPTFDELEKFNKPSENGEGDFGGLSTLFANRKKGHFMKGDAVIVIKGDLKN 441
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
LKGWVEKVDEENV IR E+KGLP LAVN +ELCKYFEPGNHVKVVSGT GATGMV+KV
Sbjct: 442 LKGWVEKVDEENVLIRSEVKGLPDPLAVNERELCKYFEPGNHVKVVSGTHEGATGMVVKV 501
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
+QHV RVFAD VVESSEVTTG+TKIGDYEL DLVLLDN SFGVIIR+E+
Sbjct: 502 DQHV------------RVFADHVVESSEVTTGVTKIGDYELHDLVLLDNLSFGVIIRLEN 549
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
EAFQVLKGVPDRPEVALVKLREIKCKLEKK NVQDR KN +AVKD VR++EGP KGKQGP
Sbjct: 550 EAFQVLKGVPDRPEVALVKLREIKCKLEKKINVQDRYKNVIAVKDDVRVIEGPSKGKQGP 609
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN-GDAYSRFNSLRTPPRI 478
V+HIY+G+LFI+DRHHLEHAGFICAK +SC+VVGGSR+ +RN GD+ SR+ + + P +
Sbjct: 610 VKHIYKGVLFIYDRHHLEHAGFICAKCTSCIVVGGSRSGANRNGGDSLSRYGNFKAPAPV 669
Query: 479 PQSPGRYSRGGPPAGGRN-----RGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSV 533
P SPGR+ RG + G G D+L+GTTVK+RLGP+KGYRG VV+VKG SV
Sbjct: 670 PSSPGRFQRGRGGGYNNSGGRHGGGRGRGDDSLLGTTVKIRLGPFKGYRGPVVEVKGNSV 729
Query: 534 RVELESQMKVVT------VDRSMISD------------------NVVVSTPYRDTPRYGM 569
RVELE MK+VT + R +S +++ DT RY M
Sbjct: 730 RVELE--MKIVTGKPLNSLLRVWVSTCRTNSNNSSYMQLIGVQYQIMLRQHRLDTSRYSM 787
Query: 570 GSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPG 629
GSETPMHPSRTPLHPYMTPMRD+GATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPG
Sbjct: 788 GSETPMHPSRTPLHPYMTPMRDSGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPG 847
Query: 630 SWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTP 689
SWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGG+YSDAGTPRD S Y NAPSPYLPSTP
Sbjct: 848 SWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGSYSDAGTPRDHGSAYANAPSPYLPSTP 907
Query: 690 GGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILV--RRSGEES 747
GQPMTP+SASYLPGTPGGQPMTPGT GLD MSPVIG D E WFMPDILV ++GE++
Sbjct: 908 -GQPMTPSSASYLPGTPGGQPMTPGT-GLDVMSPVIGGDAEA-WFMPDILVDIHKAGEDT 964
Query: 748 VVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLI 807
VGVIR+V DG+C+V LGSSG GDTI ALP+E+EI+PPRK+D++KI+GG +RG+TGKLI
Sbjct: 965 DVGVIRDV-SDGTCKVSLGSSGEGDTIMALPSELEIIPPRKSDRVKIVGGQYRGSTGKLI 1023
Query: 808 GVDGTDGIVKVDVSLDVKILDMAILAKLAQP 838
G+DG+DGIVK+D +LDVKILD+A+LAK QP
Sbjct: 1024 GIDGSDGIVKIDDNLDVKILDLALLAKFVQP 1054
>gi|413952726|gb|AFW85375.1| hypothetical protein ZEAMMB73_424690 [Zea mays]
Length = 1045
Score = 1215 bits (3143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 601/847 (70%), Positives = 703/847 (82%), Gaps = 22/847 (2%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREM 59
MQK ID+ S+LQI+SV+ALDHLKNYIY+EA+KEAHVKEACKGLRNIY S K+ LVPI+EM
Sbjct: 209 MQKFIDR-SDLQIKSVVALDHLKNYIYVEAEKEAHVKEACKGLRNIYASAKITLVPIKEM 267
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
DVL+VESK++DLSRD+WVRMK+G YKGDLAKVVDVDNVRQRV VKLIPRIDLQALA+KL
Sbjct: 268 ADVLSVESKSVDLSRDSWVRMKLGIYKGDLAKVVDVDNVRQRVDVKLIPRIDLQALASKL 327
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
EGR++ KKK FVPPPRF N+DEARE+HIRVERRRD +G+YFE + + FKDGFLYK+VS
Sbjct: 328 EGRDIVKKKAFVPPPRFFNIDEAREMHIRVERRRDKESGEYFEWVDNLKFKDGFLYKSVS 387
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
KSI NIQPTFDELEKF+ PG++ D+ASLSTLFANRKKGHFMKGDAVIVIKGDLKN
Sbjct: 388 TKSIHKSNIQPTFDELEKFKKPGDDMNGDMASLSTLFANRKKGHFMKGDAVIVIKGDLKN 447
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
L+GWVEKV++E VHIRP++ LPKTLA N KELCKYF+PG+HVKV+SG Q GATGMV+KV
Sbjct: 448 LEGWVEKVEDETVHIRPKISDLPKTLAFNEKELCKYFKPGDHVKVISGVQEGATGMVVKV 507
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
E HVLIILSDTTKE IRVFAD VVESSE+TTGIT+IGDYEL DLVLLDN SFGVIIRVE+
Sbjct: 508 EGHVLIILSDTTKEHIRVFADHVVESSEITTGITRIGDYELHDLVLLDNLSFGVIIRVEA 567
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
EAFQVLKGVPDRPEV LVKLREIK K+E++S+ +DR+ N ++ KDVVR+VEG CKGKQGP
Sbjct: 568 EAFQVLKGVPDRPEVVLVKLREIKSKIERRSSAKDRSNNIISAKDVVRVVEGACKGKQGP 627
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGS----RANGDRNGDAYSRFNSLRTP 475
VEHI++G+LFI+DRHHLEHAGFICAK+ SC++VGGS R NG DA R ++LR+
Sbjct: 628 VEHIHKGMLFIYDRHHLEHAGFICAKAQSCLLVGGSTGGRRGNGMDTADA--RLDALRSS 685
Query: 476 PRIPQSPGRYSRGGP----PAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
I QSPGR GP G G+DALVG +K++ GPYKGYRGRV +V G
Sbjct: 686 ASILQSPGRLPPRGPNMNYGGRFGGGRGGRGYDALVGKCIKIKSGPYKGYRGRVKEVTGA 745
Query: 532 SVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRD 591
VRVEL+S MK+VTV R I+D V+TP+R+ PRY +G ETPMHPSRTP H Y TPMRD
Sbjct: 746 LVRVELDSLMKIVTVKRDDIADTPTVATPFRE-PRYSLGGETPMHPSRTPHHAYQTPMRD 804
Query: 592 AGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPT 651
GATPIHDGMRTPMR RAW PMSPPRDNWEDGNP +WG+SP YQPG+P +R YEAPT
Sbjct: 805 PGATPIHDGMRTPMRSRAW---APMSPPRDNWEDGNPATWGSSPAYQPGTPQARPYEAPT 861
Query: 652 PGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPM 711
PGSGWA+TPG +++DA TPRD+ Y NAPSPY+PSTP GQPMTPNSASYLPGTPGGQPM
Sbjct: 862 PGSGWANTPGVSFNDAPTPRDN---YANAPSPYVPSTPVGQPMTPNSASYLPGTPGGQPM 918
Query: 712 TPGTGGLDAMSPVIGADNEGPWFMPDILVR--RSGEESVVGVIREVLPDGSCRVVLGSSG 769
TPG G+D +SP+IG D E W +PD+LV R G++ GV+REVL DGSCRV LGSSG
Sbjct: 919 TPGNAGMDMLSPIIGGDGEVAWLLPDVLVNVLRGGDDG-PGVVREVLGDGSCRVALGSSG 977
Query: 770 NGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDM 829
NGD +T L NE+E++ P+K+D+IKI+ G RG TGKLIG+DG+DGIV++D + +VKILDM
Sbjct: 978 NGDVVTVLANEVEVIRPKKSDRIKILNGNFRGYTGKLIGIDGSDGIVRLDETYEVKILDM 1037
Query: 830 AILAKLA 836
ILAKLA
Sbjct: 1038 VILAKLA 1044
>gi|357124871|ref|XP_003564120.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like [Brachypodium distachyon]
Length = 904
Score = 1200 bits (3105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 598/846 (70%), Positives = 701/846 (82%), Gaps = 18/846 (2%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREM 59
MQK ID+ ++LQI+SV+ALDHLKNYIY+EA+KEAHVKEACKGLRNIY S K+ LVPI+EM
Sbjct: 66 MQKFIDR-TDLQIKSVVALDHLKNYIYVEAEKEAHVKEACKGLRNIYASAKITLVPIKEM 124
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
DVL VESK +DLSRDTWVRMK+G YKGDLAKVVDVD VRQRVTVKLIPR+DLQALA+KL
Sbjct: 125 ADVLFVESKTVDLSRDTWVRMKLGVYKGDLAKVVDVDTVRQRVTVKLIPRMDLQALASKL 184
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
EGREV KKK FVPPPRF N+DEARELHIRVER+RD +G+YFE + G++FKDGFL+KTVS
Sbjct: 185 EGREVVKKKTFVPPPRFFNIDEARELHIRVERKRDKDSGEYFEMVDGLMFKDGFLHKTVS 244
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
KSI Q IQPTFDELEKFR PG++ D+ASLSTLF+NRKKGHFMKGDAVIVIKGDLKN
Sbjct: 245 TKSIHTQGIQPTFDELEKFRKPGDDMNGDMASLSTLFSNRKKGHFMKGDAVIVIKGDLKN 304
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
L+GWVEKV++ VHIRP++ LPKTLA N KELCKYF+PG+HVKVVSG Q GATGMV+KV
Sbjct: 305 LEGWVEKVEDTTVHIRPKLSDLPKTLAFNEKELCKYFKPGDHVKVVSGVQEGATGMVVKV 364
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
+ HVLIILSDTTKE IRVFAD VVESSE+TTGIT+IGDYEL DLVLLDN SFGVIIRVE+
Sbjct: 365 DGHVLIILSDTTKEHIRVFADHVVESSEITTGITRIGDYELHDLVLLDNLSFGVIIRVET 424
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
EAFQVLKG+PDRPEV +VKLREIK K++++++ QD++ N ++ KDVVR+VEGPCKG+QGP
Sbjct: 425 EAFQVLKGMPDRPEVVMVKLREIKSKIDRRASAQDKSNNMISTKDVVRVVEGPCKGRQGP 484
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN--GDAYSRFNSLRTPPR 477
VEHI++GILFI+DRHHLEHAGFICAK+ C+++GGS N A +R +LRTP
Sbjct: 485 VEHIHKGILFIYDRHHLEHAGFICAKAKQCLLIGGSNGGRRGNGMDAADARLGALRTPAS 544
Query: 478 IPQSPGRYSRGGPPAGG-----RNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQS 532
I QSPG+ GP G G+DALVG +K++ GPYKGYRGRV +V G
Sbjct: 545 ILQSPGKLPPRGPYMNSGGRFGGGGRGGRGYDALVGKCIKIKSGPYKGYRGRVKEVTGVL 604
Query: 533 VRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDA 592
VRVEL+S MK+VTV R I+D V+TP+R+ PRY MG ETPMHPSRTPLHP+ TPMRD
Sbjct: 605 VRVELDSLMKIVTVKREDIADTPTVATPFRE-PRYSMGGETPMHPSRTPLHPFQTPMRDP 663
Query: 593 GATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTP 652
GATPIHDGMRTPMR RAW PMSPPRDNWEDGNP +WG+SP Y PG+PP+R YEAPTP
Sbjct: 664 GATPIHDGMRTPMRSRAW---APMSPPRDNWEDGNPDTWGSSPAYHPGTPPARPYEAPTP 720
Query: 653 GSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMT 712
GSGWA+TPG +Y+D TPR+S+ Y NAPSPY+PSTP GQPMTPNSASYLPGTPGGQPMT
Sbjct: 721 GSGWANTPGVSYNDVPTPRESN--YGNAPSPYVPSTPVGQPMTPNSASYLPGTPGGQPMT 778
Query: 713 PGTGGLDAMSPVIGADNEGPWFMPDILVR--RSGEESVVGVIREVLPDGSCRVVLGSSGN 770
PG G+D MSP+IG + E W +PD+LV R+G++ G++REVL DGSCRV LGSSGN
Sbjct: 779 PGNVGMDMMSPIIGGEGEVNWLLPDVLVNVLRAGDDG-PGIVREVLGDGSCRVALGSSGN 837
Query: 771 GDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMA 830
GD +T LPNE+E V P+K D+IKI+ G RG GKLIG+DG+DGIVK+D + +VKILDM
Sbjct: 838 GDIVTVLPNELEAVRPKKGDRIKILNGNFRGFVGKLIGIDGSDGIVKLDDTYEVKILDMV 897
Query: 831 ILAKLA 836
ILAKLA
Sbjct: 898 ILAKLA 903
>gi|242095074|ref|XP_002438027.1| hypothetical protein SORBIDRAFT_10g006840 [Sorghum bicolor]
gi|241916250|gb|EER89394.1| hypothetical protein SORBIDRAFT_10g006840 [Sorghum bicolor]
Length = 1025
Score = 1164 bits (3012), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 584/847 (68%), Positives = 684/847 (80%), Gaps = 47/847 (5%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREM 59
MQK ID+G +LQI+SV+ALDHLKNYIY+EA+KEAHVKEACKGLRNIY S K+ LVPI+EM
Sbjct: 214 MQKYIDRG-DLQIKSVVALDHLKNYIYVEAEKEAHVKEACKGLRNIYASAKITLVPIKEM 272
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
DVL+VESK++DLSRD+WVRMK+G YKGDLAKVVDVDNVRQRV VKLIPRIDLQALA+KL
Sbjct: 273 ADVLSVESKSVDLSRDSWVRMKLGIYKGDLAKVVDVDNVRQRVDVKLIPRIDLQALASKL 332
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
+HIRVERRRD +G+YFE + + FKDGFLYK+VS
Sbjct: 333 -------------------------MHIRVERRRDKESGEYFEWVDNLKFKDGFLYKSVS 367
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
KSI NIQPTFDELEKF+ PGE+ D+ASLSTLFANRKKGHFMKGDAVIV+KGDLKN
Sbjct: 368 TKSIHTNNIQPTFDELEKFKKPGEDMNGDMASLSTLFANRKKGHFMKGDAVIVVKGDLKN 427
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
L+GWVEKV++E VHIRP++ LPKTLA N KELCKYF+PG+HVKV+SG Q GATGMV+KV
Sbjct: 428 LEGWVEKVEDETVHIRPKISDLPKTLAFNEKELCKYFKPGDHVKVISGVQEGATGMVVKV 487
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
E HVLIILSDTTKE IRVFAD VVESSE+TTGIT+IGDYEL DLVLLDN SFGVIIRVE+
Sbjct: 488 EGHVLIILSDTTKEHIRVFADHVVESSEITTGITRIGDYELHDLVLLDNLSFGVIIRVEA 547
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
EAFQVLKGVPDRPEV LVKLREIK K++++S+ +DR+ N ++ KDVVR++EG CKGKQGP
Sbjct: 548 EAFQVLKGVPDRPEVVLVKLREIKSKIDRRSSAKDRSNNIISAKDVVRVIEGACKGKQGP 607
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGS----RANGDRNGDAYSRFNSLRTP 475
VEHI++GILFI+DRHHLEHAGFICAK+ SC++VGGS R NG DA R +LR+
Sbjct: 608 VEHIHKGILFIYDRHHLEHAGFICAKAQSCLLVGGSAGGRRGNGMDTADA--RLGALRSS 665
Query: 476 PRIPQSPGRYSRGGP----PAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
I QSPGR GP G GHDALVG +K++ GPYKGYRGRV +V G
Sbjct: 666 ASILQSPGRLPPRGPNMNYGGRFGGGRGGRGHDALVGKCIKIKSGPYKGYRGRVKEVTGA 725
Query: 532 SVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRD 591
VRVEL+S MK+VTV R I+D V+TP+R+ PRY +G ETPMHPSRTP H Y TPMRD
Sbjct: 726 LVRVELDSLMKIVTVKRDDIADTPTVATPFRE-PRYSLGGETPMHPSRTPHHAYQTPMRD 784
Query: 592 AGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPT 651
GATPIHDGMRTPMR RAW PMSPPRDNWEDGNP +WG+SP YQPG+P +R YEAPT
Sbjct: 785 PGATPIHDGMRTPMRSRAW---APMSPPRDNWEDGNPATWGSSPAYQPGTPQARPYEAPT 841
Query: 652 PGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPM 711
PGSGWA+TPG +++DA TPRD+ Y NAPSPY+PSTP GQPMTPNSA+YLPGTPGGQPM
Sbjct: 842 PGSGWANTPGVSFNDAPTPRDN---YANAPSPYVPSTPVGQPMTPNSAAYLPGTPGGQPM 898
Query: 712 TPGTGGLDAMSPVIGADNEGPWFMPDILVR--RSGEESVVGVIREVLPDGSCRVVLGSSG 769
TPGT GLDAMSP++G + +G W +PD++V R G++ GV+REVL DGSCRV LGSSG
Sbjct: 899 TPGTVGLDAMSPILGGEGDGTWLLPDVMVNVLRGGDDG-PGVVREVLGDGSCRVALGSSG 957
Query: 770 NGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDM 829
NGD +T LPNE+E++ P+K+DKIKI+ G RG TGKLIG+DG+DGIV++D + +VKILDM
Sbjct: 958 NGDMVTVLPNEVEVIRPKKSDKIKILNGNFRGYTGKLIGIDGSDGIVRLDDTYEVKILDM 1017
Query: 830 AILAKLA 836
ILAKLA
Sbjct: 1018 VILAKLA 1024
>gi|218197781|gb|EEC80208.1| hypothetical protein OsI_22102 [Oryza sativa Indica Group]
Length = 1120
Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/844 (68%), Positives = 670/844 (79%), Gaps = 63/844 (7%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREM 59
MQK ID+ S+LQI+SV+ALDHLKNYIY+EA+KEAHVKEACKGLRNIY S K+ LVPI+EM
Sbjct: 331 MQKFIDR-SDLQIKSVVALDHLKNYIYVEAEKEAHVKEACKGLRNIYASAKITLVPIKEM 389
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
DVL+VESK++DLSRD WVRMK+G YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA+KL
Sbjct: 390 ADVLSVESKSVDLSRDAWVRMKLGIYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALASKL 449
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
EGRE KKK FVPPPRF N+DEARE+HIRVERRRD +G+YFE I G++FKDGFLYKTVS
Sbjct: 450 EGREAVKKKAFVPPPRFFNIDEAREMHIRVERRRDKDSGEYFEMIDGLMFKDGFLYKTVS 509
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
+KSIS QNIQP+FDELEKFR PG++ D++SLSTLFANRKKGHFMKGDAVIVIKGDLKN
Sbjct: 510 IKSISTQNIQPSFDELEKFRKPGDDMNGDMSSLSTLFANRKKGHFMKGDAVIVIKGDLKN 569
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
L+GWVEKV++E VHIRP++ LPKTLA N KELCKYF+PG+HVKVVSG Q GATGMV+KV
Sbjct: 570 LEGWVEKVEDETVHIRPKISDLPKTLAFNEKELCKYFKPGDHVKVVSGVQEGATGMVVKV 629
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
E HVLIILSDTTKE IRVFAD VVESSE+TTGIT+IGDYEL DLVLLDN SFGVIIRVE+
Sbjct: 630 EGHVLIILSDTTKEHIRVFADHVVESSEITTGITRIGDYELHDLVLLDNLSFGVIIRVET 689
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
EAFQVLKGVPDRPEV LVKLREIK K++++++ +DR+ N ++ KDVVR+VEG CKG
Sbjct: 690 EAFQVLKGVPDRPEVVLVKLREIKSKIDRRTSAKDRSNNMISSKDVVRVVEGACKGMD-- 747
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIP 479
+ R +LR+P I
Sbjct: 748 --------------------------------------------TSDPRLGALRSPASIL 763
Query: 480 QSPGRYSRGGP-----PAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
QSPGR GP G G GHDALVG +K++ GPYKGYRGRV +V G VR
Sbjct: 764 QSPGRLPPRGPHMNFGGRFGGGGRGGRGHDALVGKCIKIKSGPYKGYRGRVKEVTGVLVR 823
Query: 535 VELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGA 594
VEL+S MK+VTV R I+D V+TP+R+ PRY +G ETPMHPSRTPLHPY TPMRD GA
Sbjct: 824 VELDSLMKIVTVKRDDIADTPTVATPFRE-PRYPLGGETPMHPSRTPLHPYQTPMRDPGA 882
Query: 595 TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGS 654
TPIHDGMRTPMR R W PMSPPRDNWE+GNP +WG+SP YQPG+PP+R YEAPTPGS
Sbjct: 883 TPIHDGMRTPMR-RGW---APMSPPRDNWEEGNPATWGSSPAYQPGTPPARPYEAPTPGS 938
Query: 655 GWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG 714
GWA+TPG +Y+DA TPR+S+ Y NAPSPY+PSTP GQPMTPNSASYLPGTPGGQPMTPG
Sbjct: 939 GWANTPGVSYNDAPTPRESN--YGNAPSPYVPSTPVGQPMTPNSASYLPGTPGGQPMTPG 996
Query: 715 TGGLDAMSPVIGADNEGPWFMPDILVR--RSGEESVVGVIREVLPDGSCRVVLGSSGNGD 772
G+D MSP+IG + EG W +PD+LV R+G++ GV+REVL DGSCRV LGSSGNG+
Sbjct: 997 NVGMDIMSPIIGGEGEGNWLLPDVLVNVLRAGDDG-PGVVREVLADGSCRVALGSSGNGE 1055
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+T LP E+E++ P+K+DKIKIM G RG +GKLIG+DG+DGIVK+D + +VKILDM IL
Sbjct: 1056 IVTVLPTELEVIRPKKSDKIKIMNGNFRGYSGKLIGIDGSDGIVKLDDTYEVKILDMVIL 1115
Query: 833 AKLA 836
AKLA
Sbjct: 1116 AKLA 1119
>gi|222635168|gb|EEE65300.1| hypothetical protein OsJ_20538 [Oryza sativa Japonica Group]
Length = 1008
Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 576/844 (68%), Positives = 670/844 (79%), Gaps = 63/844 (7%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREM 59
MQK ID+ S+LQI+SV+ALDHLKNYIY+EA+KEAHVKEACKGLRNIY S K+ LVPI+EM
Sbjct: 219 MQKFIDR-SDLQIKSVVALDHLKNYIYVEAEKEAHVKEACKGLRNIYASAKITLVPIKEM 277
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
DVL+VESK++DLSRD WVRMK+G YKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA+KL
Sbjct: 278 ADVLSVESKSVDLSRDAWVRMKLGIYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALASKL 337
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
EGRE KKK FVPPPRF N+DEARE+HIRVERRRD +G+YFE I G++FKDGFLYKTVS
Sbjct: 338 EGREAVKKKAFVPPPRFFNIDEAREMHIRVERRRDKDSGEYFEMIDGLMFKDGFLYKTVS 397
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
+KSIS QNIQP+FDELEKFR PG++ D++SLSTLFANRKKGHFMKGDAVIVIKGDLKN
Sbjct: 398 IKSISTQNIQPSFDELEKFRKPGDDMNGDMSSLSTLFANRKKGHFMKGDAVIVIKGDLKN 457
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
L+GWVEKV++E VHIRP++ LPKTLA N KELCKYF+PG+HVKVVSG Q GATGMV+KV
Sbjct: 458 LEGWVEKVEDETVHIRPKISDLPKTLAFNEKELCKYFKPGDHVKVVSGVQEGATGMVVKV 517
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
E HVLIILSDTTKE IRVFAD VVESSE+TTGIT+IGDYEL DLVLLDN SFGVIIRVE+
Sbjct: 518 EGHVLIILSDTTKEHIRVFADHVVESSEITTGITRIGDYELHDLVLLDNLSFGVIIRVET 577
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
EAFQVLKGVPDRPEV LVKLREIK K++++++ +DR+ N ++ KDVVR+VEG CKG
Sbjct: 578 EAFQVLKGVPDRPEVVLVKLREIKSKIDRRTSAKDRSNNMISSKDVVRVVEGACKGMD-- 635
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIP 479
+ R +LR+P I
Sbjct: 636 --------------------------------------------TSDPRLGALRSPASIL 651
Query: 480 QSPGRYSRGGPPAG-----GRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
QSPGR GP G G GHDALVG +K++ GPYKGYRGRV +V G VR
Sbjct: 652 QSPGRLPPRGPHMNFGGRFGGGGRGGRGHDALVGKCIKIKSGPYKGYRGRVKEVTGVLVR 711
Query: 535 VELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGA 594
VEL+S MK+VTV R I+D V+TP+R+ PRY +G ETPMHPSRTPLHPY TPMRD GA
Sbjct: 712 VELDSLMKIVTVKRDDIADTPTVATPFRE-PRYPLGGETPMHPSRTPLHPYQTPMRDPGA 770
Query: 595 TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGS 654
TPIHDGMRTPMR R W PMSPPRDNWE+GNP +WG+SP YQPG+PP+R YEAPTPGS
Sbjct: 771 TPIHDGMRTPMR-RGW---APMSPPRDNWEEGNPATWGSSPAYQPGTPPARPYEAPTPGS 826
Query: 655 GWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG 714
GWA+TPG +Y+DA TPR+S+ Y NAPSPY+PSTP GQPMTPNSASYLPGTPGGQPMTPG
Sbjct: 827 GWANTPGVSYNDAPTPRESN--YGNAPSPYVPSTPVGQPMTPNSASYLPGTPGGQPMTPG 884
Query: 715 TGGLDAMSPVIGADNEGPWFMPDILVR--RSGEESVVGVIREVLPDGSCRVVLGSSGNGD 772
G+D MSP+IG + EG W +PD+LV R+G++ GV+REVL DGSCRV LGSSGNG+
Sbjct: 885 NVGMDIMSPIIGGEGEGNWLLPDVLVNVLRAGDDG-PGVVREVLADGSCRVALGSSGNGE 943
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+T LP E+E++ P+K+DKIKIM G RG +GKLIG+DG+DGIVK+D + +VKILDM IL
Sbjct: 944 IVTVLPTELEVIRPKKSDKIKIMNGNFRGYSGKLIGIDGSDGIVKLDDTYEVKILDMVIL 1003
Query: 833 AKLA 836
AKLA
Sbjct: 1004 AKLA 1007
>gi|297823203|ref|XP_002879484.1| KOW domain-containing transcription factor family protein
[Arabidopsis lyrata subsp. lyrata]
gi|297325323|gb|EFH55743.1| KOW domain-containing transcription factor family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 978
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 572/852 (67%), Positives = 661/852 (77%), Gaps = 64/852 (7%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS-QKVMLVPIREM 59
MQK ID+GSE +IRS IALDHL+NY+YIEAD EAHVKEA KG+RNIY+ QK++LVPI+EM
Sbjct: 175 MQKIIDRGSEFKIRSAIALDHLQNYVYIEADMEAHVKEAIKGMRNIYANQKILLVPIKEM 234
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
TDVL+VESKAIDLSRDTWVRMK+G YKGDLA+VVDVDNVR+RVTVKLIPRIDLQALANKL
Sbjct: 235 TDVLSVESKAIDLSRDTWVRMKLGIYKGDLAQVVDVDNVRKRVTVKLIPRIDLQALANKL 294
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
EGRE KKK F PPPRFMN+DEARELHIRVE RRDPMTGD+FENI GMLFKDGFLYK VS
Sbjct: 295 EGRENVKKKAFAPPPRFMNIDEARELHIRVEHRRDPMTGDHFENIDGMLFKDGFLYKKVS 354
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
KSI+AQNI PTFDELE+F+ P ENGE D STLFANRKKGHFMKGDAVIVIKGDL N
Sbjct: 355 TKSIAAQNITPTFDELERFKRPNENGEIDFVDPSTLFANRKKGHFMKGDAVIVIKGDLIN 414
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
LKGW+EKVDEENV IR MKGLP +AVN +ELCKYFEPGN VKVVSG G TGM++KV
Sbjct: 415 LKGWIEKVDEENVLIRSNMKGLPNPIAVNERELCKYFEPGNFVKVVSGIHEGGTGMIVKV 474
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
+QH+LIILSDTTKE IRVFAD V +S+EVT G+TKIGDYEL DLV+L + SFGVII+++S
Sbjct: 475 DQHMLIILSDTTKEHIRVFADHVAKSAEVTNGVTKIGDYELHDLVILSDLSFGVIIKLDS 534
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
EA Q+LKGVPD EV++VK EIK K+ KKSNVQDR KN +AVKDVVR++EGP KGKQGP
Sbjct: 535 EAIQILKGVPDSSEVSIVKASEIKYKIWKKSNVQDRYKNVIAVKDVVRVIEGPSKGKQGP 594
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIP 479
V IY+G+LFIHDRH+ EH GFIC + SSCV+VGG + +TP IP
Sbjct: 595 VVQIYKGVLFIHDRHNFEHTGFICTRCSSCVLVGG----------------NFKTPALIP 638
Query: 480 QSPGRYSR---GGPPAGGRNRGGRG--GHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
SP R+ R G AGGR+ GG+G G D LVGT VK+R+G +KGY GR+V+VK + VR
Sbjct: 639 PSPRRFQRADMGYNRAGGRHCGGQGRRGDDLLVGTYVKIRMGAFKGYSGRLVEVKDKLVR 698
Query: 535 VELESQMKVVT----VDRSMISDNV-VVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPM 589
VELE+ K+VT +R+ ISD V+TP Y MGS+TPMHPSRTPLHP MTPM
Sbjct: 699 VELEA--KIVTGKLHFERTAISDMTDNVATP----SHYNMGSQTPMHPSRTPLHPCMTPM 752
Query: 590 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEA 649
RD+GATPIHDGMRTPMR RAWNPY PMSPPRDNWEDGNPGSWGT P YEA
Sbjct: 753 RDSGATPIHDGMRTPMRGRAWNPYMPMSPPRDNWEDGNPGSWGTGP-----------YEA 801
Query: 650 PTPGSGWA--STPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPG 707
TPGSGW + +YSDAGTP +++ NAPS PMTP+SASYLP TPG
Sbjct: 802 STPGSGWGSSTPSRSSYSDAGTPINNA----NAPS----------PMTPSSASYLPTTPG 847
Query: 708 GQPMTPGTGGLDAMSPVIGADNEGPWFMPDIL--VRRSGEESVVGVIREVLPDGSCRVVL 765
GQPMTPGT LD MS +G D E F+P IL V ++GE+S GVIR+VL DGSC V L
Sbjct: 848 GQPMTPGT-DLDVMSHDLGGDAE-TRFVPGILVNVHKAGEDSKPGVIRDVLLDGSCVVAL 905
Query: 766 GSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVK 825
G G G+TI A N + +V P+K +++KI+GG + G+TGK+IG DG DGIVK+D SLDVK
Sbjct: 906 GHRGEGETIMATQNNVSLVCPKKNERVKILGGKYGGSTGKVIGEDGWDGIVKLDESLDVK 965
Query: 826 ILDMAILAKLAQ 837
I+ +AILAKL
Sbjct: 966 IMKLAILAKLVH 977
>gi|186505223|ref|NP_180968.2| Transcription elongation factor Spt5 [Arabidopsis thaliana]
gi|374095446|sp|O80770.2|SPT52_ARATH RecName: Full=Putative transcription elongation factor SPT5 homolog
2
gi|330253842|gb|AEC08936.1| Transcription elongation factor Spt5 [Arabidopsis thaliana]
Length = 989
Score = 1065 bits (2753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/851 (66%), Positives = 656/851 (77%), Gaps = 65/851 (7%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS-QKVMLVPIREM 59
MQK +D+GSE +IRS IALDHL+NY+YIEAD EAHVKEA KG+RNIY+ QK++LVPI+EM
Sbjct: 189 MQKIVDRGSEFKIRSAIALDHLQNYVYIEADMEAHVKEAIKGMRNIYANQKILLVPIKEM 248
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
T VL+VESKAIDLSRD+WVRMK+G YKGDLA+VVDVDNVR+RVTVKLIPRIDLQALANKL
Sbjct: 249 TAVLSVESKAIDLSRDSWVRMKLGIYKGDLAQVVDVDNVRKRVTVKLIPRIDLQALANKL 308
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
EG E KKK F PPPRFMN+DEARELHIRVE RRDPMTGDYFENIGGMLFKDGFLYK VS
Sbjct: 309 EGTENVKKKAFAPPPRFMNIDEARELHIRVEHRRDPMTGDYFENIGGMLFKDGFLYKKVS 368
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
KSI+AQN+ PTFDELE+F+ P ENGE D STLFANRKKGHFMKGDAVIVIKGDLKN
Sbjct: 369 TKSIAAQNVTPTFDELERFKRPNENGEIDFVDESTLFANRKKGHFMKGDAVIVIKGDLKN 428
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
LKGW+EKVDEENV IR EMK LP +AVN +ELCKYFEPGN VKVVSG G TGM++KV
Sbjct: 429 LKGWIEKVDEENVLIRSEMKDLPNPIAVNGRELCKYFEPGNFVKVVSGIHEGGTGMIVKV 488
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
+QH+LIILSDTTKE I VFAD V +S+EVT G+TKIGDYEL DLV+L + SFGVI++++S
Sbjct: 489 DQHMLIILSDTTKEHICVFADHVAKSAEVTKGVTKIGDYELHDLVILSDFSFGVILKLDS 548
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
EA Q+LKGVPD EV++VK EIK K+ KK NVQDR KN VAVKDVVR++EGP KGKQGP
Sbjct: 549 EAIQILKGVPDSSEVSIVKASEIKYKIWKKINVQDRYKNVVAVKDVVRVIEGPSKGKQGP 608
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIP 479
V IY+G+LFIHDRH+LEH GFIC + SSCV+ GG + +TP +P
Sbjct: 609 VVQIYKGVLFIHDRHNLEHTGFICTRCSSCVLAGG----------------NFKTPALVP 652
Query: 480 QSPGRYSR---GGPP---AGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSV 533
SP R+ R G P + GR G D LVGT VK+RLGP+KGY GR+V+VK + V
Sbjct: 653 PSPRRFQRADMGYNPGAGGRHQGGRGRRGDDHLVGTYVKIRLGPFKGYSGRLVEVKDKLV 712
Query: 534 RVELESQMKVVTVDRSMIS---DNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMR 590
RVELE+ K+VTV+R IS DNVV TP+Y MGS+TPMHPSRTPLHP MTPMR
Sbjct: 713 RVELEA--KIVTVERKAISDMTDNVVA------TPQYNMGSQTPMHPSRTPLHPCMTPMR 764
Query: 591 DAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAP 650
+GATPIHDGMRTPMR RAWNPY PMSPPRDNWEDGNPGSWGTSP YEA
Sbjct: 765 HSGATPIHDGMRTPMRGRAWNPYMPMSPPRDNWEDGNPGSWGTSP-----------YEAA 813
Query: 651 TPGSGW-ASTPG-GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGG 708
TPGS W +STPG +Y DAGTP +++ NAPS PMTP+S SYLP TPGG
Sbjct: 814 TPGSDWGSSTPGRSSYRDAGTPINNA----NAPS----------PMTPSSTSYLPTTPGG 859
Query: 709 QPMTPGTGGLDAMSPVIGADNEGPWFMPDIL--VRRSGEESVVGVIREVLPDGSCRVVLG 766
Q MTPGT LD MS IG D E F+P IL V ++GE+ GVIR+VLPDGSC V LG
Sbjct: 860 QAMTPGT-DLDVMSLDIGGDAE-TRFIPGILVNVHKAGEDRNPGVIRDVLPDGSCVVALG 917
Query: 767 SSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKI 826
G G+TI A N++ +V P+K +++KI+GG + G+T K+IG DG DGIVK+D SLD+KI
Sbjct: 918 HRGEGETIRATQNKVSLVCPKKNERVKILGGKYCGSTAKVIGEDGQDGIVKLDESLDIKI 977
Query: 827 LDMAILAKLAQ 837
L + ILAKL
Sbjct: 978 LKLTILAKLVH 988
>gi|3337352|gb|AAC27397.1| putative transcription elongation factor [Arabidopsis thaliana]
Length = 990
Score = 1023 bits (2644), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/857 (64%), Positives = 639/857 (74%), Gaps = 76/857 (8%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS-QKVMLVPIREM 59
MQK +D+GSE +IRS IALDHL+NY+YIEAD EAHVKEA KG+RNIY+ QK++LVPI+EM
Sbjct: 189 MQKIVDRGSEFKIRSAIALDHLQNYVYIEADMEAHVKEAIKGMRNIYANQKILLVPIKEM 248
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
T VL+VESKAIDLSRD+WVRMK+G YKGDLA+VVDVDNVR+RVTVKLIPRIDLQALANKL
Sbjct: 249 TAVLSVESKAIDLSRDSWVRMKLGIYKGDLAQVVDVDNVRKRVTVKLIPRIDLQALANKL 308
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
EG E KKK F PPPRFMN+DEARELHIRVE RRDPMTGDYFENIGGMLFKDGFLYK VS
Sbjct: 309 EGTENVKKKAFAPPPRFMNIDEARELHIRVEHRRDPMTGDYFENIGGMLFKDGFLYKKVS 368
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
KSI+AQN+ PTFDELE+F+ P ENGE D STLFANRKKGHFMKGDAVIVIKGDLKN
Sbjct: 369 TKSIAAQNVTPTFDELERFKRPNENGEIDFVDESTLFANRKKGHFMKGDAVIVIKGDLKN 428
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
LKGW+EKVDEENV IR EMK LP +AVN +ELCKYFEPGN VKVVSG G TGM++KV
Sbjct: 429 LKGWIEKVDEENVLIRSEMKDLPNPIAVNGRELCKYFEPGNFVKVVSGIHEGGTGMIVKV 488
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
+QH+LIILSDTTKE I VFAD V +S+EVT G+TKIGDYEL DLV+L + SFGVI++++S
Sbjct: 489 DQHMLIILSDTTKEHICVFADHVAKSAEVTKGVTKIGDYELHDLVILSDFSFGVILKLDS 548
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
EA Q+LKGVPD EV++VK EIK K+ KK NVQDR KN VAVKDVVR++EGP KGKQGP
Sbjct: 549 EAIQILKGVPDSSEVSIVKASEIKYKIWKKINVQDRYKNVVAVKDVVRVIEGPSKGKQGP 608
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIP 479
V IY+G+LFIHDRH+LEH GFIC + SSCV+ GG+ +TP +P
Sbjct: 609 VVQIYKGVLFIHDRHNLEHTGFICTRCSSCVLAGGN----------------FKTPALVP 652
Query: 480 QSPGRYSR---GGPPAGGRNRGGRGGH---DALVGTTVKVRLGPYKGYRGRVVDVKGQSV 533
SP R+ R G P G G G D LVGT VK+RLGP+KGY GR+V+VK + V
Sbjct: 653 PSPRRFQRADMGYNPGAGGRHQGGRGRRGDDHLVGTYVKIRLGPFKGYSGRLVEVKDKLV 712
Query: 534 RVELESQMKVVT----VDRSMISD---NVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYM 586
RVELE+ K+VT +R ISD NVV TP+Y MGS+TPMHPSRTPLHP M
Sbjct: 713 RVELEA--KIVTGKLHFERKAISDMTDNVVA------TPQYNMGSQTPMHPSRTPLHPCM 764
Query: 587 TPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRA 646
TPMR +GATPIHDGMRTPMR RAWNPY PMSPPRDNWEDGNPGSWGTSP
Sbjct: 765 TPMRHSGATPIHDGMRTPMRGRAWNPYMPMSPPRDNWEDGNPGSWGTSP----------- 813
Query: 647 YEAPTPGSGW-ASTPG-GNYSDAGTPRDSSSTY----VNAPSPYLPSTPGGQPMTPNSAS 700
YEA TPGS W +STPG +Y DAGTP ++ Y +NA +P PMTP+S S
Sbjct: 814 YEAATPGSDWGSSTPGRSSYRDAGTPINNGFVYYLLCLNANAP--------SPMTPSSTS 865
Query: 701 YLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGEESVVGVIREVLPDGS 760
YLP TPGGQ MTPGT LD MS I + + + + + + DGS
Sbjct: 866 YLPTTPGGQAMTPGT-DLDVMSLDI------------VNIFQFTDYVSLFFLCGHHQDGS 912
Query: 761 CRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDV 820
C V LG G G+TI A N++ +V P+K +++KI+GG + G+T K+IG DG DGIVK+D
Sbjct: 913 CVVALGHRGEGETIRATQNKVSLVCPKKNERVKILGGKYCGSTAKVIGEDGQDGIVKLDE 972
Query: 821 SLDVKILDMAILAKLAQ 837
SLD+KIL + ILAKL
Sbjct: 973 SLDIKILKLTILAKLVH 989
>gi|168038966|ref|XP_001771970.1| RNA polymerase II transcription elongation factor SPT5
[Physcomitrella patens subsp. patens]
gi|162676752|gb|EDQ63231.1| RNA polymerase II transcription elongation factor SPT5
[Physcomitrella patens subsp. patens]
Length = 1044
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/864 (56%), Positives = 636/864 (73%), Gaps = 49/864 (5%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK ID+ L I+S IALDHLK Y+YIE++KEA+V++AC+G+R IYSQKV LVPI+
Sbjct: 201 MQKYIDQEQINQPLLIKSAIALDHLKGYLYIESEKEAYVRQACRGMRMIYSQKVTLVPIK 260
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
EMTDVL+VE KA+++ +DTWVR+KIG YKGDLAKVVDVD+VRQR +KLIPR+DLQALA
Sbjct: 261 EMTDVLSVEKKAVEIDQDTWVRVKIGIYKGDLAKVVDVDHVRQRAQIKLIPRVDLQALAA 320
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
KLEGR+ KK+P P PRF+++ + ++L I VER+RD TG+ F+ GGM+FKDG+LYK
Sbjct: 321 KLEGRDDMKKRPR-PAPRFISIQDVKDLRIPVERKRDGSTGELFDQFGGMMFKDGYLYKY 379
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDL 237
VS+K+I A+ I+P+ DEL++F+ PGE+G + + NR G FMKGDAV+VI+GDL
Sbjct: 380 VSLKTIDAKGIEPSLDELQRFQKPGEDGMDALGLPPSAIKNR--GQFMKGDAVVVIEGDL 437
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVL 297
+NL G VEKVD++NV+I P+ K L +TL K+L K+F+ G+HVKV++G GATGM++
Sbjct: 438 RNLMGVVEKVDDDNVYIVPKYKDLKETLVFKEKQLQKFFKTGDHVKVIAGNHEGATGMIV 497
Query: 298 KVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRV 357
KV+ ++RVFA ++VESSEVT+GITK+GDYEL DLV LD ++ G+I+RV
Sbjct: 498 KVQN------------NLRVFAHNIVESSEVTSGITKLGDYELHDLVALDQSTVGLIVRV 545
Query: 358 ESEAFQVLKGVPDRPEVALVKLREIKCK-LEKKSNVQDRNKNTVAVKDVVRIVEGPCKGK 416
E +AFQ+LKG P+R E+ +VK REI+ K ++K QDR+ N V++KD+VR+++G CKGK
Sbjct: 546 EKDAFQILKGNPERTELLMVKPREIRRKVFDRKVCAQDRDMNVVSMKDIVRVLDGHCKGK 605
Query: 417 QGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPP 476
QGPVEHI+RG+LFIHDRHHL++ G++C K+ C +GGSR GDR + F L +
Sbjct: 606 QGPVEHIHRGLLFIHDRHHLDNGGYVCVKARQCSALGGSRNGGDRVSSCPNLFAELTSII 665
Query: 477 RIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVE 536
G GG GGR G D++VG +VK+RLGP+KGYRGRVVD +VR+E
Sbjct: 666 SGGGGRGGAHGGGGFGGGRAGGRGRREDSIVGRSVKIRLGPFKGYRGRVVDATDSTVRIE 725
Query: 537 LESQMKVVT------VDRSMISDNVVV--------STPYRDTPRYGMGSETPMHPSRTPL 582
LESQMKVVT MI+ N+ V +PRYG GSETPMHPSRTP+
Sbjct: 726 LESQMKVVTGAFPSGFYCLMITRNLGVVPRLFLGFRACVTSSPRYGAGSETPMHPSRTPM 785
Query: 583 H--PYMTPMRDAG-ATPIHDGMRTPMRDRAWNPYTPMSPPR-DNWEDGNPGSWGT---SP 635
H YMTPMRD ATP HDGMRTPMRDRAWNP+TPM+P R +NW+D NP +W T +P
Sbjct: 786 HHPAYMTPMRDPNFATPSHDGMRTPMRDRAWNPHTPMTPHRGNNWDDANPSTWDTHTSTP 845
Query: 636 QYQPGSPPSRAYEAPTPGSGW-ASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPM 694
QY+PG+P R++EAPTPG+GW A TPG ++S+AGTP + + +Y APSPYLP TPGG PM
Sbjct: 846 QYEPGTPGGRSFEAPTPGNGWSAQTPGASFSEAGTPTEPAQSYA-APSPYLPGTPGGPPM 904
Query: 695 TPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILV--RRSGEESVVGVI 752
TP SYLPGTPGGQPMTPGTGGLD SP IG W MPDI+V R+ GEE+ VI
Sbjct: 905 TPGVPSYLPGTPGGQPMTPGTGGLDPTSPAIGG-----WVMPDIVVTIRKLGEETQTAVI 959
Query: 753 REVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGT 812
REV+PDGSCRV LG +G+GDT+ ++E+V P+KTDKIKI+ G HRG TGKL+G+DG
Sbjct: 960 REVMPDGSCRVALGPTGDGDTLLVGQADMELVLPKKTDKIKIVSGEHRGCTGKLMGIDGA 1019
Query: 813 DGIVKVDVSLDVKILDMAILAKLA 836
DGIVK+D +LD++ILDM+ L+K+A
Sbjct: 1020 DGIVKLDDTLDIRILDMSSLSKIA 1043
>gi|168018336|ref|XP_001761702.1| RNA polymerase II transcription elongation factor SPT5
[Physcomitrella patens subsp. patens]
gi|162687073|gb|EDQ73458.1| RNA polymerase II transcription elongation factor SPT5
[Physcomitrella patens subsp. patens]
Length = 896
Score = 890 bits (2301), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/854 (54%), Positives = 610/854 (71%), Gaps = 60/854 (7%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK ID+ L I+S IALDHLK Y+YIE++KEA+V++AC+G+R IYSQKV LVPI+
Sbjct: 84 MQKYIDQDQINQPLLIKSAIALDHLKGYLYIESEKEAYVRQACRGMRMIYSQKVTLVPIK 143
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
EMTDV++VE K +++ +DTWVR+KIG YKGDLAKVVDVD+VRQR +KLIPRIDLQALA
Sbjct: 144 EMTDVVSVEKKLVEIDQDTWVRVKIGIYKGDLAKVVDVDHVRQRAQIKLIPRIDLQALAA 203
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
KLEGR+ KK+P P PRF+++ + ++L I VER+RD TG+ F+ GGM+FKDG+LYK
Sbjct: 204 KLEGRDDMKKRP-RPAPRFISIQDVKDLRIPVERKRDGSTGELFDQFGGMMFKDGYLYKY 262
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDL 237
VS+K+I A+ ++P+ DEL++F+ PGE+G + + NR G FMKGDAV+VI+GDL
Sbjct: 263 VSLKTIDAKGVEPSLDELQRFQKPGEDGMDALGLPPSAIKNR--GKFMKGDAVVVIEGDL 320
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVL 297
+NL G VEKVD++NV+I P+ K L +TL K+L K+F+ G+HVKV++G GATGM++
Sbjct: 321 RNLMGVVEKVDDDNVYIVPKYKDLKETLVFKEKQLQKFFKTGDHVKVIAGNHDGATGMIV 380
Query: 298 KVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRV 357
KV+ +V+ +LSDTT+ED+RVFA ++VESSEVT+GITK+GDYEL DLV LD+++ G+I+RV
Sbjct: 381 KVQNNVITLLSDTTREDLRVFAHNIVESSEVTSGITKLGDYELHDLVALDHSTVGLIVRV 440
Query: 358 ESEAFQVLKGVPDRPEVALVKLREIKCK-LEKKSNVQDRNKNTVAVKDVVRIVEGPCKGK 416
E + FQ+LKG P+R E+ +VK R+I+ K ++K N QDR+ N +++KDVVR+++G KGK
Sbjct: 441 EKDVFQILKGNPERIELLMVKPRDIRRKVFDRKVNTQDRDMNVISLKDVVRVLDGQFKGK 500
Query: 417 QGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPP 476
QGPVEHI+RG+LFIHDRHHLE+ G++C K+ C +GGSR DR F L
Sbjct: 501 QGPVEHIHRGLLFIHDRHHLENGGYVCIKARQCTALGGSRNGSDRVSSYSKLFARL---- 556
Query: 477 RIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVE 536
G G G D++VG +VK+RLGP+KGYRGRV D +VR+E
Sbjct: 557 --------LGGGYGGGRGGGGGRGRREDSIVGRSVKIRLGPFKGYRGRVKDATDSTVRIE 608
Query: 537 LESQMKVVTVDRSMISDNVVVSTPYR----DTPRYGMGSETPMHPSRTPLH--PYMTPMR 590
LESQMKVVT M S+ + ++ +PRYG GSETPMHPSRTP+H +MTPMR
Sbjct: 609 LESQMKVVT---GMFSNRYLRFMVWKYGIVGSPRYGAGSETPMHPSRTPMHHPAFMTPMR 665
Query: 591 DAG-ATPIHDGMRTPMRDRAWNPYTPMSPPR-DNWEDGNPGSWGTSPQYQPGSPPSRAYE 648
D ATP DGMRTPMRDRAWNP+TPM+P R +NW+D NP +W + P +E
Sbjct: 666 DPNFATPSLDGMRTPMRDRAWNPHTPMTPHRGNNWDDANPSTWDI---HTP-------FE 715
Query: 649 APTPGSGW-ASTPGGNYSDAGTPRDSSSTY----VNAPSPYLPSTPGGQPMTPNSASYLP 703
APTPG+GW A TPG ++S+AGTP + +Y APSPYLP TPGG PMTP SYLP
Sbjct: 716 APTPGNGWSAQTPGASFSEAGTPTEPVQSYALCLAAAPSPYLPGTPGGPPMTPGVPSYLP 775
Query: 704 GTPGGQPMTPGTGGLDAMSPVIGAD-NEGPWFMPDILVRRSGEESVVGVIREVLPDGSCR 762
GTPGGQPMTPGTGGLD SP IG N P I V L DGSCR
Sbjct: 776 GTPGGQPMTPGTGGLDPTSPAIGEHINYSPQTELRICVH--------------LQDGSCR 821
Query: 763 VVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSL 822
V LG +G+GD + ++++V P+KTDKIKI+ G HRG TGKL+G+DG DGIV++D +L
Sbjct: 822 VALGPTGDGDILLVGQGDMDLVLPKKTDKIKIVSGEHRGCTGKLMGIDGADGIVRLDDTL 881
Query: 823 DVKILDMAILAKLA 836
DV+ILDM+ L+K++
Sbjct: 882 DVRILDMSSLSKIS 895
>gi|46805362|dbj|BAD16863.1| putative KOW domain-containing transcription factor [Oryza sativa
Japonica Group]
Length = 1013
Score = 890 bits (2300), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/849 (56%), Positives = 592/849 (69%), Gaps = 51/849 (6%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREM 59
MQK ID +LQI+SV+ALDHLKNYIY+EA KEAHVKEACKG+RNI+ S+KV LVPIRE+
Sbjct: 202 MQKSIDT-PDLQIKSVLALDHLKNYIYVEAYKEAHVKEACKGVRNIFASRKVTLVPIREV 260
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
DVL+V+SK+ D+S +TWVRMK+G YKGDLAKVVDVD+V Q+VTVKLIPRIDLQALANK
Sbjct: 261 ADVLSVQSKSTDISINTWVRMKLGAYKGDLAKVVDVDDVHQKVTVKLIPRIDLQALANKF 320
Query: 120 EGREVAK-KKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+G +V K KK FVPPP+ + +EAR RD +G+Y+E + G+ FKDGFL+KT
Sbjct: 321 DGLKVVKEKKSFVPPPKLFSANEARN--------RD--SGEYYEMVDGLKFKDGFLHKTF 370
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLK 238
S+KSISA NIQP+FDELEKFR P + D ASLSTLF NRKKGHFMKGD+VIVIKGDLK
Sbjct: 371 SIKSISAHNIQPSFDELEKFREPDNDINEDAASLSTLFTNRKKGHFMKGDSVIVIKGDLK 430
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
NL+G+VEK ++ VHIR ++ GL TL N +LCK F PG+HVKVVSG Q GATG+V+K
Sbjct: 431 NLEGYVEKAEDATVHIRSKLPGLLNTLVFNEGDLCKCFNPGDHVKVVSGVQEGATGLVVK 490
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
VE HVLIILSDTTKE IRVFAD VVESSEVTTG+T+IGDYEL DLVLL
Sbjct: 491 VEGHVLIILSDTTKEHIRVFADHVVESSEVTTGLTRIGDYELHDLVLLGWKKKHFRQENL 550
Query: 359 SEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
F +LKG PD+PE+ LVKLREIK K+ ++++ +DR+ N V+ KDVVR++EG CK +
Sbjct: 551 YRTFHILKGEPDKPELVLVKLREIKSKIYRRTSAKDRSSNIVSTKDVVRVIEGACKVESK 610
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRI 478
+ +IY F+ + + ++ + + G + G RF + R+ RI
Sbjct: 611 GLWNIYTEEYFLFMIVTTLNIQALSVQAHNHASLLGDQLG---MGTVDPRFGAFRSSARI 667
Query: 479 PQSPGR------YSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQS 532
QSPGR ++ G GGR+ GG+ GHD LV +K++ GPYKGYRGRV ++ G
Sbjct: 668 LQSPGRLPPKAPHTNYGRRFGGRDHGGK-GHDTLVNRCIKIKSGPYKGYRGRVKEMTGAL 726
Query: 533 VRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDA 592
VRVEL+S MKVV V R I+D V+TP+ ++ G+ETP+HPSRTPL P+ TP+RD
Sbjct: 727 VRVELDSLMKVVAVKREDIADTATVATPFGES-HNSWGNETPVHPSRTPLRPFQTPLRDP 785
Query: 593 GATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTP 652
GATP+ +GMRTPM RAW PMSPPR Q PG+P + +EAPTP
Sbjct: 786 GATPVPNGMRTPMPSRAW---APMSPPR----------LALGWQSMPGTPVPQPHEAPTP 832
Query: 653 GSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMT 712
GSGWA TPG ++ DA PS Y TP GQPMTPN ASYLP TPGGQPMT
Sbjct: 833 GSGWAVTPGVSFGDASG---------KNPSSYATPTPSGQPMTPNPASYLPSTPGGQPMT 883
Query: 713 PGTGGLDAMSPVIGADNEGPWFMPDILVR--RSGEESVVGVIREVLPDGSCRVVLGSSGN 770
G +D MSP IG + W +PD+LV R G ++ GV++EVLPDGSCRV LGSSG+
Sbjct: 884 LGYIEMDIMSPAIGEEGGRNWLLPDVLVNVLREGYDTTCGVVKEVLPDGSCRVALGSSGS 943
Query: 771 GDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVD---VSLDVKIL 827
GD ITA PNE E+V P+K DK+KIM G RG TGKL+GVDG+DGIVKVD + KIL
Sbjct: 944 GDEITAFPNEFEVVKPKKNDKLKIMSGSWRGLTGKLLGVDGSDGIVKVDGLETTDQTKIL 1003
Query: 828 DMAILAKLA 836
D AIL KLA
Sbjct: 1004 DTAILGKLA 1012
>gi|302780661|ref|XP_002972105.1| hypothetical protein SELMODRAFT_96727 [Selaginella moellendorffii]
gi|300160404|gb|EFJ27022.1| hypothetical protein SELMODRAFT_96727 [Selaginella moellendorffii]
Length = 1003
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 455/852 (53%), Positives = 607/852 (71%), Gaps = 52/852 (6%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D K L I+S +A+DHLK +IY+EADKEA+VK+A KGLRNI+ + + LVPI+
Sbjct: 189 MQKYLDFQAKNEPLLIKSAVAIDHLKGFIYVEADKEAYVKQAIKGLRNIFPKTIHLVPIK 248
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
EMTDVL VE K+ D+ ++ WVR+K G YKGDLA+V+DVD+VRQR +KL+PR+++Q L
Sbjct: 249 EMTDVLTVEKKSFDIDKENWVRVKTGLYKGDLARVLDVDHVRQRARIKLVPRVEIQELVA 308
Query: 118 KLEGREVAKKKPF-VPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYK 176
KLEG+E+ K K F V PP+ + E RE+ + +ERRRD GD++E + M F DG+L K
Sbjct: 309 KLEGKEIPKSKGFSVRPPQRFVMQELREMKVHIERRRD-ARGDHYEQVANMQFMDGYLIK 367
Query: 177 TVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGD 236
VS+K+++A ++ P+ DEL+ F+ PG++ D LS+ +RK+G F+KGD V+ ++GD
Sbjct: 368 NVSLKTLNAVDVMPSLDELQSFQKPGDDDSVDAFGLSS---SRKRGQFVKGDTVVAVEGD 424
Query: 237 LKNLKGWVEKVDEENVHIRPEMK-GLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
LK ++G VEKVDE+NV IRP+ K GL L + K+L K+FEPGNHVKV SG GATGM
Sbjct: 425 LKGIQGVVEKVDEDNVEIRPDKKSGLKDVLRFHIKQLSKHFEPGNHVKVTSGKHEGATGM 484
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
++K+E ++ +RVF D +VE+SEVT G+TK+G++EL DL+ LD + GVI+
Sbjct: 485 IVKIE-----------RDSVRVFRDSIVETSEVTCGLTKLGEFELHDLIALDPMTVGVIV 533
Query: 356 RVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKS-NVQDRNKNTVAVKDVVRIVEGPCK 414
R+E++ QVLKG PD+ EV VK R+++ +L K N QDR+ N V+VKD+VR+V GP K
Sbjct: 534 RIEADGCQVLKGTPDKQEVITVKQRDLRKRLYNKMINTQDRDTNVVSVKDIVRVVSGPFK 593
Query: 415 GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT 474
GKQG VEHI RGILF+ DR HLE+ GFIC +++SC+ +GGSR + N A + F+SL+
Sbjct: 594 GKQGVVEHINRGILFVQDRQHLENGGFICVRATSCLALGGSRGDKQVNHIAAA-FSSLKP 652
Query: 475 PPRIPQSPGRYSRGGP--PAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK-GQ 531
P + QSP R GP P G N G R +D VG +VK+R GPYKGYRGRVVD G+
Sbjct: 653 PSQFLQSPRRSPVRGPYGPPSGNNPGRR--NDNYVGRSVKIRTGPYKGYRGRVVDASGGR 710
Query: 532 SVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLH-PYMTPMR 590
SVR+ELESQMK+VTVDR ++SD V + +R+ RYGMGS+TP+HPSRTP+H YMTPMR
Sbjct: 711 SVRIELESQMKIVTVDRDILSDIGDVQSSFREPTRYGMGSQTPVHPSRTPMHSAYMTPMR 770
Query: 591 DAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY--QPGSP-PSRAY 647
D+ ATPIHDGMRTPMRDRAWNP TP+ +D G+ TSPQY QPG+P +R+Y
Sbjct: 771 DSSATPIHDGMRTPMRDRAWNPTTPLR------DDTGWGAHTTSPQYMQQPGTPLATRSY 824
Query: 648 EAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPG 707
EAPTPGSGWA+TP G+Y+D+G+P ++ + Y N SPYLP TPG PMTP +PGTPG
Sbjct: 825 EAPTPGSGWANTP-GSYADSGSPVEAVAHYGNPSSPYLPGTPGALPMTPA----VPGTPG 879
Query: 708 GQPMTPGTGGLDAMSPVIGADNEGPWFMPDILV--RRSGEESVVGVIREVLPDGSCRVVL 765
GQPMTPG+G LD SP G E W +P+++V RR+G ++ +GVI EVLPDG CR+ +
Sbjct: 880 GQPMTPGSGVLDPTSPATGK-LEKQWGLPELMVTLRRNG-DTTIGVIEEVLPDGYCRLSI 937
Query: 766 GSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVK 825
G DT+T +EIEIV P K D+IK++ G RG +GKLIG+D DGIV+ DVK
Sbjct: 938 GD----DTVTVSHSEIEIVQPEKNDRIKVVYGEFRGVSGKLIGIDSDDGIVR--TGTDVK 991
Query: 826 ILDMAILAKLAQ 837
IL+M L K+ +
Sbjct: 992 ILNMKFLGKVGK 1003
>gi|302823823|ref|XP_002993560.1| hypothetical protein SELMODRAFT_449156 [Selaginella moellendorffii]
gi|300138627|gb|EFJ05389.1| hypothetical protein SELMODRAFT_449156 [Selaginella moellendorffii]
Length = 931
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/779 (54%), Positives = 563/779 (72%), Gaps = 41/779 (5%)
Query: 75 DTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPF-VPP 133
+ WVR+K G YKGDLA+V+DVD+VRQR +KL+PR+++Q L KLEG+E+ K K F V P
Sbjct: 178 ENWVRVKTGLYKGDLARVLDVDHVRQRARIKLVPRVEIQELVAKLEGKEIPKSKGFSVRP 237
Query: 134 PRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
P+ + E RE+ + +ERRRD GD++E + M F DG+L K VS+K+++A ++ P+ D
Sbjct: 238 PQRFVMQELREMKVHIERRRD-ARGDHYEQVANMQFMDGYLIKNVSLKTLNAVDVMPSLD 296
Query: 194 ELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVH 253
EL+ F+ PG++ D LS ++RK+G F+KGD V+ ++GDLK ++G VEKVDE+NV
Sbjct: 297 ELQSFQKPGDDDSVDAFGLS---SSRKRGQFVKGDTVVAVEGDLKGIQGVVEKVDEDNVE 353
Query: 254 IRPEMK-GLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTK 312
IRP+ K GL L + K+L K+FEPGNHVKV SG GATGM++K+E+ +IILSDTTK
Sbjct: 354 IRPDKKSGLKDVLRFHIKQLSKHFEPGNHVKVTSGKHEGATGMIVKIERDSVIILSDTTK 413
Query: 313 EDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRP 372
ED+RVF D +VE+SEVT G+TK+G++EL DL+ LD + GVI+R+E++ QVLKG PD+
Sbjct: 414 EDVRVFRDSIVETSEVTCGLTKLGEFELHDLIALDPMTVGVIVRIEADGCQVLKGTPDKQ 473
Query: 373 EVALVKLREIKCKLEKKS-NVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIH 431
EV VK R+++ +L K N QDR+ N V+VKD+VR+V GP KGKQG VEHI RGILF+
Sbjct: 474 EVITVKQRDLRKRLYNKMINTQDRDTNVVSVKDIVRVVSGPFKGKQGVVEHINRGILFVQ 533
Query: 432 DRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYS-RG-- 488
DR HLE+ GFIC +++SC+ +GGSR GD+ + F+SL+ P + QSP R RG
Sbjct: 534 DRQHLENGGFICVRATSCLALGGSR--GDKQNHIAAAFSSLKPPSQFLQSPRRSPVRGPY 591
Query: 489 GPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK-GQSVRVELESQMKVVTVD 547
GPP+G + GR +D VG +VK+R GPYKGYRGRVVD G+SVR+ELESQMK+VTVD
Sbjct: 592 GPPSGFVSNPGR-RNDNYVGRSVKIRTGPYKGYRGRVVDASGGRSVRIELESQMKIVTVD 650
Query: 548 RSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLH-PYMTPMRDAGATPIHDGMRTPMR 606
R ++SD V + +R+ RYGMGS+TP+HPSRTP+H YMTPMRD+ ATPIHDGMRTPMR
Sbjct: 651 RDILSDIGDVQSSFREPTRYGMGSQTPVHPSRTPMHSAYMTPMRDSSATPIHDGMRTPMR 710
Query: 607 DRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY--QPGSP-PSRAYEAPTPGSGWASTPGGN 663
DRAWNP TP+ +D G+ TSPQY QPG+P +R+YEAPTPGSGWA+TP G+
Sbjct: 711 DRAWNPTTPLR------DDTGWGAHTTSPQYMQQPGTPLATRSYEAPTPGSGWANTP-GS 763
Query: 664 YSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSP 723
Y+D+G+P ++ + Y N SPYLP TPG PMTP +PGTPGGQPMTPG+G LD SP
Sbjct: 764 YADSGSPVEAVAHYGNPSSPYLPGTPGALPMTPA----VPGTPGGQPMTPGSGVLDPTSP 819
Query: 724 VIGADN---EGPWFMPDILV--RRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALP 778
G + E W +P+++V RR+G ++++GVI EVLPDG CR+ +G DT+T
Sbjct: 820 ATGFNMHELEKQWGLPELMVTLRRNG-DTMIGVIEEVLPDGYCRLSIGD----DTVTVSH 874
Query: 779 NEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
+EIEIV P K D+IK++ G RG +GKLIG+D DGIV+ DVKIL+M L K+ +
Sbjct: 875 SEIEIVQPEKNDRIKVVYGEFRGVSGKLIGIDSDDGIVR--TGTDVKILNMKFLGKVGK 931
>gi|222623750|gb|EEE57882.1| hypothetical protein OsJ_08547 [Oryza sativa Japonica Group]
Length = 1011
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/830 (48%), Positives = 505/830 (60%), Gaps = 114/830 (13%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREM 59
MQK ID +LQI+SV+ALDHLKNYIY+EA KEAHVKEACKG+RNI+ S+KV LVPIRE
Sbjct: 202 MQKSIDT-PDLQIKSVLALDHLKNYIYVEAYKEAHVKEACKGVRNIFASRKVTLVPIRE- 259
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
+A V+ V + +++ R+ L A L
Sbjct: 260 -----------------------------VADVLSVQSKSTDISINTWVRMKLGAYKGDL 290
Query: 120 EGREVAKKKPFVPPPRFMNVDEARE-LHIRVERRRDPMT-GDYFENIGGMLFKDGFLYKT 177
+ ++VD+ + + +++ R D + F+ + + K F+
Sbjct: 291 A--------------KVVDVDDVHQKVTVKLIPRIDLQALANKFDGLKVVKEKKSFVPP- 335
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDL 237
P + R P + D ASLSTLF NRKKGHFMKGD+VIVIKGDL
Sbjct: 336 ------------PKLFSANEAREPDNDINEDAASLSTLFTNRKKGHFMKGDSVIVIKGDL 383
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVL 297
KNL+G+VEK ++ VHIR ++ GL TL N +LCK F PG+HVKVVSG Q GATG+V+
Sbjct: 384 KNLEGYVEKAEDATVHIRSKLPGLLNTLVFNEGDLCKCFNPGDHVKVVSGVQEGATGLVV 443
Query: 298 KVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRV 357
KVE HVLIILSDTTKE IRVFAD VVESSEVTTG+T+IGDYEL DLVLL
Sbjct: 444 KVEGHVLIILSDTTKEHIRVFADHVVESSEVTTGLTRIGDYELHDLVLLGWKKKHFRQEN 503
Query: 358 ESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQ 417
F +LKG PD+PE+ LVKLREIK K+ ++++ +DR+ N V+ KDVVR++EG CK
Sbjct: 504 LYRTFHILKGEPDKPELVLVKLREIKSKIYRRTSAKDRSSNIVSTKDVVRVIEGACKA-- 561
Query: 418 GPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPR 477
L + +H G G RF + R+ R
Sbjct: 562 ----------LSVQAHNHASLLGDQLGM-----------------GTVDPRFGAFRSSAR 594
Query: 478 IPQSPGR------YSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
I QSPGR ++ G GGR+ GG+G HD LV +K++ GPYKGYRGRV ++ G
Sbjct: 595 ILQSPGRLPPKAPHTNYGRRFGGRDHGGKG-HDTLVNRCIKIKSGPYKGYRGRVKEMTGA 653
Query: 532 SVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRD 591
VRVEL+S MKVV V R I+D V+TP+ ++ G+ETP+HPSRTPL P+ TP+RD
Sbjct: 654 LVRVELDSLMKVVAVKREDIADTATVATPFGES-HNSWGNETPVHPSRTPLRPFQTPLRD 712
Query: 592 AGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPT 651
GATP+ +GMRTPM RAW PMSPPR+ WED +W +SP YQPG+P + +EAPT
Sbjct: 713 PGATPVPNGMRTPMPSRAW---APMSPPRNGWEDAV--TWESSPTYQPGTPVPQPHEAPT 767
Query: 652 PGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPM 711
PGSGWA TPG ++ DA PS Y TP GQPMTPN ASYLP TPGGQPM
Sbjct: 768 PGSGWAVTPGVSFGDASG---------KNPSSYATPTPSGQPMTPNPASYLPSTPGGQPM 818
Query: 712 TPGTGGLDAMSPVIGADNEGPWFMPDILVR--RSGEESVVGVIREVLPDGSCRVVLGSSG 769
T G +D MSP IG + W +PD+LV R G ++ GV++EVLPDGSCRV LGSSG
Sbjct: 819 TLGYIEMDIMSPAIGEEGGRNWLLPDVLVNVLREGYDTTCGVVKEVLPDGSCRVALGSSG 878
Query: 770 NGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVD 819
+GD ITA PNE E+V P+K DK+KIM G RG TGKL+GVDG+DGIVK +
Sbjct: 879 SGDEITAFPNEFEVVKPKKNDKLKIMSGSWRGLTGKLLGVDGSDGIVKAE 928
>gi|218191659|gb|EEC74086.1| hypothetical protein OsI_09110 [Oryza sativa Indica Group]
Length = 988
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/417 (66%), Positives = 337/417 (80%), Gaps = 3/417 (0%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREM 59
MQK ID +LQI+SV+ALDHLKNYIY+EA KEAHVKEACKG+RNI+ S+KV LVPIREM
Sbjct: 223 MQKSIDT-PDLQIKSVLALDHLKNYIYVEAYKEAHVKEACKGVRNIFASRKVTLVPIREM 281
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
DVL+V+SK+ D+S +TWVRMK+G YKGDLAKVVDVD+V Q+VTVKLIPRIDLQALANK
Sbjct: 282 ADVLSVQSKSTDISINTWVRMKLGAYKGDLAKVVDVDDVHQKVTVKLIPRIDLQALANKF 341
Query: 120 EGREVAK-KKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+G +V K KK FVPPP+ + +EARE++IRV+RRR+ +G+Y+E + G+ FKDGFL+KT
Sbjct: 342 DGLKVVKEKKSFVPPPKLFSANEAREMNIRVDRRRNRDSGEYYEMVDGLKFKDGFLHKTF 401
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLK 238
S+KSISA NIQP+FDELEKFR P + D ASLSTLF NRKKGHFMKGD+VIVIKGDLK
Sbjct: 402 SIKSISAHNIQPSFDELEKFREPDNDINEDAASLSTLFTNRKKGHFMKGDSVIVIKGDLK 461
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
NL+G+VEK ++ VHIR ++ GL TL N + LCK F PG+HVKVVSG Q GATG+V+K
Sbjct: 462 NLEGYVEKAEDATVHIRSKLPGLLDTLVFNEEGLCKCFNPGDHVKVVSGVQEGATGLVVK 521
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
VE HVLIILSDTTKE IRVFAD VVESSEVTTG+T+IGDYEL DLVLL
Sbjct: 522 VEGHVLIILSDTTKEHIRVFADHVVESSEVTTGLTRIGDYELHDLVLLGWKKKHFRQENL 581
Query: 359 SEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKG 415
F +LKG PD+PE+ LVKLREIK K+ ++++ +DR+ N V+ KDVVR++EG CK
Sbjct: 582 YITFHILKGEPDKPELVLVKLREIKSKIYRRTSAKDRSSNIVSTKDVVRVIEGACKA 638
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/296 (52%), Positives = 181/296 (61%), Gaps = 47/296 (15%)
Query: 566 RYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWED 625
R G+ETP+HPSRTPL P+ TP+RD GATP+ +GMRTPM RAW PMSPPR++WED
Sbjct: 714 RNSWGNETPVHPSRTPLRPFQTPLRDPGATPVPNGMRTPMPSRAW---APMSPPRNSWED 770
Query: 626 GNPGSWGTSPQYQ--------------------PGSPPSRAYEAPTPGSGWASTPGGNYS 665
+W +SP YQ PG+P + +EAPTPGSGWA TPG ++
Sbjct: 771 AV--TWESSPTYQISFGLAINGKFLSLYISLLQPGTPVPQPHEAPTPGSGWAVTPGVSFG 828
Query: 666 DAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVI 725
DA PS Y TP GQPMTPN ASYLP TPGGQPMT G +D MSP I
Sbjct: 829 DASGKN---------PSSYATPTPSGQPMTPNPASYLPSTPGGQPMTLGYIEMDIMSPAI 879
Query: 726 GADNEGPWFMPDILVRRSGEESVVGVIREVLP--DGSCRVVLGSSGNGDTITALPNEIEI 783
G + F SG + ++P DGSCRV LGSSG+GD ITA PNE E+
Sbjct: 880 GEEGGRTGFYQMFWSMCSG--------KVMIPPADGSCRVALGSSGSGDEITAFPNEFEV 931
Query: 784 VPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVD---VSLDVKILDMAILAKLA 836
V P+K DK+KIM G RG TGKL+GVDG+DGIVKVD + KILD AIL KLA
Sbjct: 932 VKPKKNDKLKIMSGSWRGLTGKLLGVDGSDGIVKVDGLETTDQTKILDTAILGKLA 987
>gi|413944024|gb|AFW76673.1| hypothetical protein ZEAMMB73_018684 [Zea mays]
Length = 770
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/347 (76%), Positives = 304/347 (87%), Gaps = 3/347 (0%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREM 59
MQK ID+ S+LQI+SV+ALDHLKNYIY+EA+KEAHVKEACKGLRNIY S K+ LVPI+EM
Sbjct: 206 MQKFIDR-SDLQIKSVVALDHLKNYIYVEAEKEAHVKEACKGLRNIYASAKITLVPIKEM 264
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
DVL+VESK++DLSRD+WVRMK+G YKGDLAKVVDVDNVRQRV VKLIPRIDLQALA+KL
Sbjct: 265 ADVLSVESKSVDLSRDSWVRMKLGIYKGDLAKVVDVDNVRQRVDVKLIPRIDLQALASKL 324
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
EG V KKK FVPPPRF N+DEARE+HIRVERRRD +G+YFE + + FKDGFLYK+VS
Sbjct: 325 EGESV-KKKAFVPPPRFFNIDEAREMHIRVERRRDKESGEYFEWVDNLKFKDGFLYKSVS 383
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
KSI NIQP FDELEKF+ PG++ D+ASLSTLFANRKKGHFMKGDAVIVIKGDLKN
Sbjct: 384 TKSIHTNNIQPNFDELEKFKKPGDDMNGDMASLSTLFANRKKGHFMKGDAVIVIKGDLKN 443
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
L+GWVEKV++E VHIRP++ LPKTLA N KELCKYF+PG+HVKV+SG Q GATGMV+KV
Sbjct: 444 LEGWVEKVEDETVHIRPKISDLPKTLAFNEKELCKYFKPGDHVKVISGVQEGATGMVVKV 503
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL 346
E HVLIILSDTTKE IRVFAD VVESSE+TTGIT+IG +++LL
Sbjct: 504 EGHVLIILSDTTKEHIRVFADHVVESSEITTGITRIGIIGKMEILLL 550
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 165/202 (81%), Gaps = 4/202 (1%)
Query: 636 QYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMT 695
+QPG+P +R YEAPTPGSGWA+TPG +++DA TPRD+ Y NAPSPY+PSTP GQPMT
Sbjct: 571 NFQPGTPQARPYEAPTPGSGWANTPGVSFNDAPTPRDN---YANAPSPYVPSTPVGQPMT 627
Query: 696 PNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVR-RSGEESVVGVIRE 754
PNSASYLPGTPGGQPMTPG G+D MSP+IG + E W +PD+LV SG + GV+RE
Sbjct: 628 PNSASYLPGTPGGQPMTPGNAGMDMMSPIIGGEGEATWLLPDVLVNVLSGGDDGPGVVRE 687
Query: 755 VLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDG 814
VL DGSCRV LGSSGNGD +T LPNE+E++ P+K+DKIKI+ G RG TGKLIG+DG+DG
Sbjct: 688 VLGDGSCRVALGSSGNGDMVTVLPNEVEVIRPKKSDKIKILNGSFRGHTGKLIGIDGSDG 747
Query: 815 IVKVDVSLDVKILDMAILAKLA 836
IV++D + +VKILDM ILAKLA
Sbjct: 748 IVRLDDTYEVKILDMVILAKLA 769
>gi|297721593|ref|NP_001173159.1| Os02g0772000 [Oryza sativa Japonica Group]
gi|255671276|dbj|BAH91888.1| Os02g0772000 [Oryza sativa Japonica Group]
Length = 954
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 243/348 (69%), Positives = 286/348 (82%), Gaps = 12/348 (3%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREM 59
MQK ID +LQI+SV+ALDHLKNYIY+EA KEAHVKEACKG+RNI+ S+KV LVPIRE+
Sbjct: 202 MQKSIDT-PDLQIKSVLALDHLKNYIYVEAYKEAHVKEACKGVRNIFASRKVTLVPIREV 260
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
DVL+V+SK+ D+S +TWVRMK+G YKGDLAKVVDVD+V Q+VTVKLIPRIDLQALANK
Sbjct: 261 ADVLSVQSKSTDISINTWVRMKLGAYKGDLAKVVDVDDVHQKVTVKLIPRIDLQALANKF 320
Query: 120 EGREVAK-KKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+G +V K KK FVPPP+ + +EAR R RD +G+Y+E + G+ FKDGFL+KT
Sbjct: 321 DGLKVVKEKKSFVPPPKLFSANEAR-------RNRD--SGEYYEMVDGLKFKDGFLHKTF 371
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLK 238
S+KSISA NIQP+FDELEKFR P + D ASLSTLF NRKKGHFMKGD+VIVIKGDLK
Sbjct: 372 SIKSISAHNIQPSFDELEKFREPDNDINEDAASLSTLFTNRKKGHFMKGDSVIVIKGDLK 431
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
NL+G+VEK ++ VHIR ++ GL TL N +LCK F PG+HVKVVSG Q GATG+V+K
Sbjct: 432 NLEGYVEKAEDATVHIRSKLPGLLNTLVFNEGDLCKCFNPGDHVKVVSGVQEGATGLVVK 491
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL 346
VE HVLIILSDTTKE IRVFAD VVESSEVTTG+T+IGDYEL DLVLL
Sbjct: 492 VEGHVLIILSDTTKEHIRVFADHVVESSEVTTGLTRIGDYELHDLVLL 539
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/380 (55%), Positives = 258/380 (67%), Gaps = 27/380 (7%)
Query: 468 RFNSLRTPPRIPQSPGR------YSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGY 521
RF + R+ RI QSPGR ++ G GGR+ GG+G HD LV +K++ GPYKGY
Sbjct: 590 RFGAFRSSARILQSPGRLPPKAPHTNYGRRFGGRDHGGKG-HDTLVNRCIKIKSGPYKGY 648
Query: 522 RGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTP 581
RGRV ++ G VRVEL+S MKVV V R I+D V+TP+ ++ G+ETP+HPSRTP
Sbjct: 649 RGRVKEMTGALVRVELDSLMKVVAVKREDIADTATVATPFGES-HNSWGNETPVHPSRTP 707
Query: 582 LHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGS 641
L P+ TP+RD GATP+ +GMRTPM RAW PMSPPR+ WED +W +SP YQPG+
Sbjct: 708 LRPFQTPLRDPGATPVPNGMRTPMPSRAW---APMSPPRNGWEDAV--TWESSPTYQPGT 762
Query: 642 PPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASY 701
P + +EAPTPGSGWA TPG ++ DA PS Y TP GQPMTPN ASY
Sbjct: 763 PVPQPHEAPTPGSGWAVTPGVSFGDASG---------KNPSSYATPTPSGQPMTPNPASY 813
Query: 702 LPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVR--RSGEESVVGVIREVLPDG 759
LP TPGGQPMT G +D MSP IG + W +PD+LV R G ++ GV++EVLPDG
Sbjct: 814 LPSTPGGQPMTLGYIEMDIMSPAIGEEGGRNWLLPDVLVNVLREGYDTTCGVVKEVLPDG 873
Query: 760 SCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVD 819
SCRV LGSSG+GD ITA PNE E+V P+K DK+KIM G RG TGKL+GVDG+DGIVKVD
Sbjct: 874 SCRVALGSSGSGDEITAFPNEFEVVKPKKNDKLKIMSGSWRGLTGKLLGVDGSDGIVKVD 933
Query: 820 ---VSLDVKILDMAILAKLA 836
+ KILD AIL KLA
Sbjct: 934 GLETTDQTKILDTAILGKLA 953
>gi|145347649|ref|XP_001418275.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578504|gb|ABO96568.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 938
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 345/916 (37%), Positives = 484/916 (52%), Gaps = 143/916 (15%)
Query: 1 MQKCIDKGSE----LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK-VMLVP 55
MQK I+ + +QI S IA DHLK YIY+EA++E HV++A +G+R++Y K V LVP
Sbjct: 80 MQKTINLAKQGKPPMQILSCIAQDHLKGYIYVEAEREDHVRKALQGMRHVYHGKPVRLVP 139
Query: 56 IREMTDVLAVESKAIDLSR-DTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQA 114
I EM D ++V +K + + + D+WVRM+ G YKGDLA+VVDV+ + TVKL+PRID Q
Sbjct: 140 INEMVDSISVTTKEVSVVKVDSWVRMRTGVYKGDLAQVVDVNYADNQCTVKLVPRIDYQH 199
Query: 115 LANKLEGREVAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGML----- 168
LA+K G+ K K V PP R EA+ L++ ER G Y ++G +
Sbjct: 200 LADKESGKAKGKTKSQVRPPARLFAEAEAKRLNLSFER------GRYDRSLGASVDVLCS 253
Query: 169 ---FKDGFLYKTVSMKSISAQNIQPTFDELEKFRT-------PGENGESDIASLSTLFAN 218
DG+ KT S+ ++ + PT DEL+KF G N +A+LS
Sbjct: 254 TTKLLDGYHMKTCSLATVKLAD-APTLDELQKFAIGDDEDGEKGGNSSGALAALSKAVGT 312
Query: 219 RKKG-HFMKGDAVIVIKGDLKNLKGWVEKVDEEN-VHIRPEMKGLPKTLAVNSKELCKYF 276
RK FM GD VI+++GDL+NL+G VE++D + V + P K L + L S++L K+F
Sbjct: 313 RKTDLKFMPGDQVIIVEGDLRNLEGVVERIDPDGRVVVNPSHKELNELLTFKSEQLRKHF 372
Query: 277 EPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIG 336
+ G+ V+V+ G G GMV+KVE+ V I S + E+ +VF D+ +S E T I IG
Sbjct: 373 KTGSTVRVLHGKHEGVVGMVVKVERDVAHIFSTVSNEEFQVFMHDLADSEETTQRIDTIG 432
Query: 337 DYELRDLVLLDNNSFGVIIRVESEAFQVL--KGVPDRPEVALVKLREIKCKLEKKS-NVQ 393
+Y L DL +L+ + G IIRVE + V+ G PDRPE+ VKL E+K KL ++ + Q
Sbjct: 433 EYALHDLAMLEGSEVGCIIRVEKDVAFVMTNAGTPDRPEIRPVKLHELKKKLLSRNISAQ 492
Query: 394 DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVG 453
D + +T+ +VRI++G K G VEHI++G L+I RH EH G +C ++ +CV G
Sbjct: 493 DAHMDTIDQGSMVRIIDGKYKDTTGTVEHIFKGTLWIRARHVQEHGGIVCIRARNCVAHG 552
Query: 454 GSRANGDRNGDAYSRFNSLRTPPRIP----------------------QSPGRYSRGGPP 491
G++ + G A + PP+ P Q+P R PP
Sbjct: 553 GNKGSQIGGGLAAQMMGAHGMPPKSPGHALLQSSYTSGLRGDLMSQSLQAP----RAAPP 608
Query: 492 AGGRNRG--GRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS 549
R G GR G D L+G T KVR G YKGY GR+VDV SVR+EL++Q + VTV+R
Sbjct: 609 ---RAFGGPGRRGQDPLIGQTKKVRAGVYKGYIGRIVDVTDTSVRLELQAQARTVTVNRE 665
Query: 550 MISDNVVVSTPYRDT---PRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMR 606
+ +V P RD+ PR + P SRTP H MTP G TP+H GM TP R
Sbjct: 666 HL--DVPQVAPSRDSFLAPRATSMYDAP--GSRTPAHYPMTPAHGGGMTPMHGGM-TPAR 720
Query: 607 DRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWAS-----TPG 661
+ AWNP + +DNWE P S T G+GW + TPG
Sbjct: 721 EAAWNPTATPAHIQDNWE-----------------PTS------TAGTGWGAGNVGYTPG 757
Query: 662 GNYSDAGTPRDSSSTYVNAPSPY-LPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDA 720
G Y DSS+ P+ Y + +TPG A+Y TPGG TPG D
Sbjct: 758 G-YG------DSSALAGPTPNAYGVGATPG--------AAY-GQTPGGYGQTPGGYEADE 801
Query: 721 -MSPVIGA----DNEGPWFMPDILVRRSGEESVVGVIREVLPDGSC-RVVLGSSGNGDTI 774
++P A D +G F+P ++VR + G I V P GS +V +G+S D +
Sbjct: 802 YVAPPAAASWPEDYKGR-FLPGVVVRLT--SGAQGYITSVAPAGSSFKVKIGTSRPRDGV 858
Query: 775 -------------TALPNEIEIVPPRKTDKIKIM---GGPHRGATGKLIGVDGTDGIVKV 818
T E+EIV P K + I+ G RG TG+LI +DG DG+V++
Sbjct: 859 EVLETVPKSAPEETVTEQELEIVRPGKKTSVIIVTDSGDASRGDTGELITIDGVDGVVRL 918
Query: 819 DVSLDVKILDMAILAK 834
+ DV +LDM+ LA+
Sbjct: 919 SSTNDVVLLDMSCLAR 934
>gi|440799586|gb|ELR20630.1| Transcription elongation factor, putative [Acanthamoeba castellanii
str. Neff]
Length = 1184
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 345/997 (34%), Positives = 493/997 (49%), Gaps = 179/997 (17%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK D +L I+S D+LK YIY+EA+KE HVK+A GLRN+ + + LVP++
Sbjct: 199 MQKYFDVDGTDRQLLIKSASCADNLKGYIYVEAEKEIHVKQAITGLRNLIAWDLKLVPLK 258
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
EMT + V KA++L RD WVR+K G YKGDLA+V+DVD R RVTV+LIPR+DL L +
Sbjct: 259 EMTAIFTVAKKALNLRRDAWVRIKRGTYKGDLAQVLDVDETRARVTVRLIPRLDLTKLHS 318
Query: 118 --------KLEGREVAKKKPFVPPPRFMNVDEARELH-IRVERRRDPMTGDYFENIGGML 168
+ +K+ PP RF N +E R+L VE R G YF
Sbjct: 319 VADLDDDEDDDDATAKRKRKTRPPQRFFNDEEVRKLAGSEVESRPSGRGGKYFV-FAMQK 377
Query: 169 FKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGEN-------------GESDIASLSTL 215
FKDGFL+K +++KS+ NI+PT DEL+KF+ P + G + +A STL
Sbjct: 378 FKDGFLHKPMNIKSLETDNIEPTLDELQKFQAPPSSLAGGGNGDDDDGAGSAAVALSSTL 437
Query: 216 FANRKKGH-------------FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP 262
A K F+KGDAV V++GDLK+L G VE V + V I P+ + L
Sbjct: 438 SALAKSQQQGAGAGGKKRGATFIKGDAVAVVEGDLKHLMGIVESVSDNMVTILPKHEDLR 497
Query: 263 KTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDV 322
L +++L KY + G+HVKV+SG G TG++L+V+ +++ I SD T ++I+V A D+
Sbjct: 498 DLLTFPAEQLTKYVKMGDHVKVISGRFEGETGLILRVDGNIVTIFSDLTMKEIQVLAQDI 557
Query: 323 VESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREI 382
E++EV G ++G+YEL DLV +D + G+I++VE ++F+++ +V L+ I
Sbjct: 558 QEATEVAAGNLQLGNYELHDLVQIDPQTVGMIVKVERDSFRIMDTA---GKVTSYPLQAI 614
Query: 383 KCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGF 441
+ K + V D+N++ V V DV+++VEGP KG+QG V HI+R F+H L++ G
Sbjct: 615 QNKRTNRHAVAFDKNQSQVTVGDVLQVVEGPLKGRQGTVRHIHRYFAFLHSNAVLDNTGI 674
Query: 442 ICAKSSSCVVVGGSRANGDRNGDAYSR------------------FNSLRTPPRIPQSPG 483
+ +S V+GG + N R G + S + + +P R SP
Sbjct: 675 FVVRVASTTVLGGGK-NRARPGPSPSARGAHSAAGGGGYGHGHHPMSGMPSPSRSLMSPS 733
Query: 484 RYSRGGP------------PA-----GGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVV 526
R S G PA GG GRG D+L+ TV V GP+KGY G VV
Sbjct: 734 R-SLGSGPPGGGPRGRPQDPAGGRGRGGGRGRGRGREDSLIHKTVTVGRGPWKGYVGIVV 792
Query: 527 DVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYM 586
D S RVEL + K V VDR+ ++ ++ R P G+ + P P
Sbjct: 793 DATDNSARVELHTNCKTVNVDRTFLT---IIDAEGRREPATAAGAASGGFQEGVPATPSW 849
Query: 587 ----TPMR---DAGATPIHDGMRTPMRDR-----AWNPYTPMSPPRDNWEDGNP------ 628
TPMR D ATP+ G TPMR AWNP TP +W+D NP
Sbjct: 850 ASSRTPMRGDGDGSATPMRAG--TPMRSSTPSHDAWNPTTPSRA--TSWDD-NPVGHHPN 904
Query: 629 ------GSWGTSP----------------QYQPGSPPSRAYE---------APTPGSGWA 657
GS+G + + P SP + P+ G
Sbjct: 905 EYGSIGGSYGVAAGGYAQSSSSSSSSAITPFSPFSPAPVGRDRDDQMLLPRTPSEGIYNP 964
Query: 658 STPGGNYSDAGTPRDSSSTYVNAPSPY----LPSTPGGQPMTPNSASYLPGTPG--GQPM 711
+TP G Y+ TP +S T + P+P STPG P T +Y P TP G P
Sbjct: 965 ATPSGGYTPHFTPMESHYT-PDQPTPRGGPNEVSTPGYTPYTATPQAY-PATPATPGIPQ 1022
Query: 712 TPGTGGL-------------------------DAMSPVIGA--DNEGPWFMPDILVR--- 741
TPGT G+ D + V G + PW I VR
Sbjct: 1023 TPGTPGMMSLPSLARASAPATPGMISYDSDRVDTTNTVAGGVMSTDEPWTTEGIEVRVSD 1082
Query: 742 --RSGEESVVGVIREVLPDGSCRV-VLGSSGNGDTITALPN-EIEIVPPRKTDKIKIMGG 797
R G+ S + SCRV V GN ++P+ +E V P K D++K++ G
Sbjct: 1083 AYRGGQYSQASAVITSAGRDSCRVTVRDRDGNDLESLSIPSPYLEPVVPAKKDRVKVIRG 1142
Query: 798 PHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAK 834
+G G L+G+DG+DGIVK++ +LD+K+L + +LA+
Sbjct: 1143 ELKGNVGLLVGIDGSDGIVKMEPNLDIKLLALPLLAR 1179
>gi|74222096|dbj|BAE26864.1| unnamed protein product [Mus musculus]
Length = 1082
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 298/896 (33%), Positives = 478/896 (53%), Gaps = 91/896 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL VE
Sbjct: 208 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVE 265
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 266 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 325
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 326 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 380
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 381 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 438
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 439 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 498
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 499 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 558
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 559 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 615
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 616 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSA 675
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G++ G P G GR ++ L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 676 EGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 734
Query: 542 KVVTVDRSMIS--DNVV---VSTPYRDTPRYGMGSETPMH--PSRTPLHPYMTPMRD--- 591
+ ++VDR ++ D+ +++ Y TP Y GS+TPM+ SRTP++ TP++D
Sbjct: 735 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMY--GSQTPMYGSDSRTPMYGSQTPLQDGSR 792
Query: 592 ----AGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG------ 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 793 TPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQ 852
Query: 633 -----------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRD 672
+PQY P +P + A Y AP+P + +P P
Sbjct: 853 TPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSP 912
Query: 673 SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD- 728
+ ++P+ Y P TP PM AS P G PMTPG GG + +P G +
Sbjct: 913 AGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 968
Query: 729 NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIE 782
N W DI V+ + +V GVIR V G C V L S +I++ +E
Sbjct: 969 NSSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLE 1025
Query: 783 IVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 837
+ P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 1026 PITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDIEDQQIKILNLRFLGKLLE 1081
>gi|334328572|ref|XP_001363220.2| PREDICTED: transcription elongation factor SPT5 [Monodelphis
domestica]
Length = 993
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 300/912 (32%), Positives = 474/912 (51%), Gaps = 106/912 (11%)
Query: 2 QKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIR 57
Q+ + G LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+
Sbjct: 111 QREEELGRPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIK 168
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
EMTDVL V + +L +WVR+K G YK D+A+V V+ + +++K+IPRID +
Sbjct: 169 EMTDVLKVVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKA 228
Query: 118 KLEGRE-VAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLY 175
++ ++ AK+K F PP R + ++ R L V GD+ G + GFL+
Sbjct: 229 RMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLF 283
Query: 176 KTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKG 235
K+ +M ++ + ++PT ELEKF E + ++ + ST ++ +F GD V V +G
Sbjct: 284 KSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEG 341
Query: 236 DLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
+L NL+G + VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG+
Sbjct: 342 ELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGL 401
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
+++VE++ +I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+
Sbjct: 402 IVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIV 461
Query: 356 RVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCK 414
R+E E FQVL +V V+ + + + + + V D +N + V+D+V++++GP
Sbjct: 462 RLERETFQVLNMY---GKVVTVRHQAVTRRKDNRFAVALDSEQNNIHVRDIVKVIDGPHS 518
Query: 415 GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT 474
G++G + H++RG F+H + +E+ G K+ V+ GGS+ N
Sbjct: 519 GREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTV 569
Query: 475 PPRIPQSPGRYSRGGPPAGGRNRGGRGGH------------DALVGTTVKVRLGPYKGYR 522
P SP S P AGG+ G + L+G TV++ GPYKGY
Sbjct: 570 GGFAPMSPRISSPMHPSAGGQRGGFGSAGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYI 629
Query: 523 GRVVDVKGQSVRVELESQMKVVTVDRSMISDNVV-----VSTPYRDTPRYG-------MG 570
G V D + RVEL S + ++VDR ++ +++ Y TP YG G
Sbjct: 630 GVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYVQG 689
Query: 571 SETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------D 621
S TPM+ S+TPLH TP+HDG RTP + AW+P P +P R D
Sbjct: 690 SRTPMYSSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFD 749
Query: 622 NWEDGNPGSWGTSP-----------------QYQPGSPPSRA---------YEAPTPGSG 655
+ +P ++G +P QY P +P + A Y AP+P
Sbjct: 750 DEPTPSPQAYGGTPNPQTPGYPDPSSPQVNAQYNPQTPGTPAMYNTDQFSPYAAPSPQGS 809
Query: 656 WASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT 715
+ +P + A +P +T+ +P+ Y P TP PM AS P G PMTPG
Sbjct: 810 YQPSPQSYHQVAPSPAGYQNTH--SPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGA 863
Query: 716 ---GGLDAMSPVIGAD-NEGPWFMPDIL--VRRSGEESVV----GVIREVLPDGSCRVVL 765
GG + +P G + N W DI VR + +S V GVIR V G C V L
Sbjct: 864 PSPGGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDSQVVGQTGVIRSVT-GGMCSVYL 922
Query: 766 GSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVK 825
S +I++ +E + P K++K+K++ G R ATG L+ +DG DGIV++D+ +K
Sbjct: 923 KDSEKVVSISS--EHLEPITPTKSNKVKVILGEDREATGDLLSIDGEDGIVRMDLDEQLK 980
Query: 826 ILDMAILAKLAQ 837
IL++ L KL +
Sbjct: 981 ILNLRFLGKLLE 992
>gi|395859712|ref|XP_003802176.1| PREDICTED: transcription elongation factor SPT5 [Otolemur garnettii]
Length = 1086
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 299/895 (33%), Positives = 469/895 (52%), Gaps = 87/895 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNM---HGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN-GDAYSRFNSLRTPPRIPQSP 482
+RG+ F+H + +E+ G K+ V+ GGS+ N D +S + + P P
Sbjct: 618 FRGVAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVNNFTDGFSPMSPRISSPMHPSLG 677
Query: 483 GRYSRGGPPAGGRNRGGRGGH---DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELES 539
G++ G P GG RG + L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 678 GQHGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHS 737
Query: 540 QMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMT 587
+ ++VDR ++ + TP TP YG GS TPM+ S+TPL
Sbjct: 738 TCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSR 797
Query: 588 PMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG------ 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 798 TPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQ 857
Query: 633 -----------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRD 672
+PQY P +P + A Y AP+P + +P P
Sbjct: 858 TPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSP 917
Query: 673 SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD- 728
+ ++P+ Y P TP PM AS P G PMTPG GG + +P G +
Sbjct: 918 AGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 973
Query: 729 NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIE 782
N W DI V+ + VV GVIR V G C V L S +I++ +E
Sbjct: 974 NSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLE 1030
Query: 783 IVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
+ P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 1031 PITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 1085
>gi|37589282|gb|AAH58598.1| Suppressor of Ty 5 homolog (S. cerevisiae) [Mus musculus]
Length = 1082
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 295/894 (32%), Positives = 468/894 (52%), Gaps = 87/894 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 208 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 265
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 266 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 325
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 326 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 380
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 381 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKERENNFQPGDNVEVCEGELINLQGKV 438
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 439 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 498
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 499 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 558
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 559 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 615
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 616 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSA 675
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G++ G P G GR ++ L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 676 EGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 734
Query: 542 KVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTPM 589
+ ++VDR ++ + TP TP YG GS TPM+ S+TPL
Sbjct: 735 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTP 794
Query: 590 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG-------- 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 795 HYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTP 854
Query: 633 ---------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSS 674
+PQY P +P + A Y AP+P + +P P +
Sbjct: 855 GYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAG 914
Query: 675 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD-NE 730
++P+ Y P TP PM AS P G PMTPG GG + +P G + N
Sbjct: 915 YQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNS 970
Query: 731 GPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIV 784
W DI V+ + +V GVIR V G C V L S +I++ +E +
Sbjct: 971 SDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPI 1027
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 837
P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 1028 TPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKLLE 1081
>gi|148692198|gb|EDL24145.1| suppressor of Ty 5 homolog (S. cerevisiae) [Mus musculus]
Length = 1080
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 295/894 (32%), Positives = 468/894 (52%), Gaps = 87/894 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 497 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 556
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 557 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 613
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 614 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSA 673
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G++ G P G GR ++ L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 674 EGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 732
Query: 542 KVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTPM 589
+ ++VDR ++ + TP TP YG GS TPM+ S+TPL
Sbjct: 733 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTP 792
Query: 590 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG-------- 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 793 HYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTP 852
Query: 633 ---------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSS 674
+PQY P +P + A Y AP+P + +P P +
Sbjct: 853 GYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAG 912
Query: 675 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD-NE 730
++P+ Y P TP PM AS P G PMTPG GG + +P G + N
Sbjct: 913 YQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNS 968
Query: 731 GPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIV 784
W DI V+ + +V GVIR V G C V L S +I++ +E +
Sbjct: 969 SDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPI 1025
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 837
P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 1026 TPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKLLE 1079
>gi|35505439|gb|AAH57449.1| Supt5h protein, partial [Mus musculus]
Length = 1098
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 297/896 (33%), Positives = 477/896 (53%), Gaps = 91/896 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 224 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 281
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 282 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 341
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 342 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 396
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 397 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 454
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 455 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 514
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 515 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 574
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 575 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 631
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 632 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSA 691
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G++ G P G GR ++ L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 692 EGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 750
Query: 542 KVVTVDRSMIS--DNVV---VSTPYRDTPRYGMGSETPMH--PSRTPLHPYMTPMRD--- 591
+ ++VDR ++ D+ +++ Y TP Y GS+TPM+ SRTP++ TP++D
Sbjct: 751 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMY--GSQTPMYGSGSRTPMYGSQTPLQDGSR 808
Query: 592 ----AGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG------ 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 809 TPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQ 868
Query: 633 -----------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRD 672
+PQY P +P + A Y AP+P + +P P
Sbjct: 869 TPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSP 928
Query: 673 SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD- 728
+ ++P+ Y P TP PM AS P G PMTPG GG + +P G +
Sbjct: 929 AGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 984
Query: 729 NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIE 782
N W DI V+ + +V GVIR V G C V L S +I++ +E
Sbjct: 985 NSSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLE 1041
Query: 783 IVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 837
+ P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 1042 PITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKLLE 1097
>gi|37589463|gb|AAH59849.1| Supt5h protein [Mus musculus]
Length = 888
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 295/894 (32%), Positives = 468/894 (52%), Gaps = 87/894 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 14 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 71
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 72 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 131
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 132 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 186
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 187 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 244
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 245 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 304
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 305 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 364
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 365 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 421
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 422 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSA 481
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G++ G P G GR ++ L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 482 EGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 540
Query: 542 KVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTPM 589
+ ++VDR ++ + TP TP YG GS TPM+ S+TPL
Sbjct: 541 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTP 600
Query: 590 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG-------- 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 601 HYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTP 660
Query: 633 ---------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSS 674
+PQY P +P + A Y AP+P + +P P +
Sbjct: 661 GYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAG 720
Query: 675 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD-NE 730
++P+ Y P TP PM AS P G PMTPG GG + +P G + N
Sbjct: 721 YQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNS 776
Query: 731 GPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIV 784
W DI V+ + +V GVIR V G C V L S +I++ +E +
Sbjct: 777 SDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPI 833
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 837
P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 834 TPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKLLE 887
>gi|71897283|ref|NP_001026555.1| transcription elongation factor SPT5 [Gallus gallus]
gi|82080942|sp|Q5ZI08.1|SPT5H_CHICK RecName: Full=Transcription elongation factor SPT5; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit
gi|53136612|emb|CAG32635.1| hypothetical protein RCJMB04_31j17 [Gallus gallus]
Length = 1079
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 307/893 (34%), Positives = 479/893 (53%), Gaps = 87/893 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 207 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQ--MVPIKEMTDVLKVV 264
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + ++++K+IPRID + ++ ++ A
Sbjct: 265 KEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFA 324
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 325 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 379
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 380 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 437
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 438 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 497
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 498 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 557
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 558 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 614
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRI--PQS 481
+RG F+H + +E+ G K+ V+ GGS+ R+ ++ + PRI P
Sbjct: 615 FRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKP---RDVTNFTVGSFAPMSPRISSPMH 671
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDA-LVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQ 540
P + G GG GRG D L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 672 PSGAGQRGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARVELHST 731
Query: 541 MKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTP 588
+ ++VDR ++ + TP TP YG GS TPM+ S+TPLH
Sbjct: 732 CQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLHDGSRT 791
Query: 589 MRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR--DNWEDG-------NPGSWGTSPQYQ- 638
TP+HDG RTP + AW+P P +P R +++E G +P +G +P Q
Sbjct: 792 PHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEDFEYGFDDEPTPSPQGYGGTPNPQT 851
Query: 639 PGSP-PS-----RAYEAPTPG----------SGWA-STPGGNYSDAGTPRDSSSTYVNAP 681
PG P PS + Y TPG S +A +P G+Y + +P+ S + AP
Sbjct: 852 PGYPDPSSPQVTQPYNPQTPGTPAMYNTDQFSPYAVPSPQGSYQPSPSPQ---SYHQVAP 908
Query: 682 SP--YLPS-TPGGQPMTPNSASYL----PGTPGGQPMTPGT---GGLDAMSPVIGADNEG 731
SP Y + +P TP+ +Y P G PMTPG GG + +P G +
Sbjct: 909 SPVGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQSS 968
Query: 732 P-WFMPDILVR------RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIV 784
W DI V+ S GVIR V G C V L S +I++ +E V
Sbjct: 969 SDWVTTDIQVKVRDTYLDSQAVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPV 1025
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
P K++K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 1026 TPTKSNKVKVILGEDREATGILLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 1078
>gi|22094123|ref|NP_038704.1| transcription elongation factor SPT5 [Mus musculus]
gi|81882162|sp|O55201.1|SPT5H_MOUSE RecName: Full=Transcription elongation factor SPT5; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit
gi|2754752|gb|AAC40052.1| chromatin structural protein homolog Supt5hp [Mus musculus]
gi|13938032|gb|AAH07132.1| Suppressor of Ty 5 homolog (S. cerevisiae) [Mus musculus]
gi|74144699|dbj|BAE27330.1| unnamed protein product [Mus musculus]
Length = 1082
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 296/896 (33%), Positives = 475/896 (53%), Gaps = 91/896 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 208 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 265
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 266 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 325
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 326 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 380
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 381 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 438
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 439 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 498
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 499 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 558
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 559 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 615
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 616 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSA 675
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G++ G P G GR ++ L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 676 EGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 734
Query: 542 KVVTVDRSMISDNVV-----VSTPYRDTPRYGMGSETPMH--PSRTPLHPYMTPMRD--- 591
+ ++VDR ++ +++ Y TP Y GS+TPM+ SRTP++ TP++D
Sbjct: 735 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMY--GSQTPMYGSGSRTPMYGSQTPLQDGSR 792
Query: 592 ----AGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG------ 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 793 TPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQ 852
Query: 633 -----------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRD 672
+PQY P +P + A Y AP+P + +P P
Sbjct: 853 TPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSP 912
Query: 673 SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD- 728
+ ++P+ Y P TP PM AS P G PMTPG GG + +P G +
Sbjct: 913 AGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 968
Query: 729 NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIE 782
N W DI V+ + +V GVIR V G C V L S +I++ +E
Sbjct: 969 NSSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLE 1025
Query: 783 IVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 837
+ P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 1026 PITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKLLE 1081
>gi|403044506|ref|NP_001100967.2| transcription elongation factor SPT5 [Rattus norvegicus]
gi|392337506|ref|XP_003753275.1| PREDICTED: transcription elongation factor SPT5 [Rattus norvegicus]
gi|74203110|dbj|BAE26244.1| unnamed protein product [Mus musculus]
Length = 1083
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 295/894 (32%), Positives = 468/894 (52%), Gaps = 87/894 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 209 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 266
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 267 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 326
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 327 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 381
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 382 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 439
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 440 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 499
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 500 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 559
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 560 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 616
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 617 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSA 676
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G++ G P G GR ++ L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 677 EGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 735
Query: 542 KVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTPM 589
+ ++VDR ++ + TP TP YG GS TPM+ S+TPL
Sbjct: 736 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTP 795
Query: 590 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG-------- 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 796 HYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTP 855
Query: 633 ---------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSS 674
+PQY P +P + A Y AP+P + +P P +
Sbjct: 856 GYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAG 915
Query: 675 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD-NE 730
++P+ Y P TP PM AS P G PMTPG GG + +P G + N
Sbjct: 916 YQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNS 971
Query: 731 GPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIV 784
W DI V+ + +V GVIR V G C V L S +I++ +E +
Sbjct: 972 SDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPI 1028
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 837
P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 1029 TPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKLLE 1082
>gi|149056473|gb|EDM07904.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_b [Rattus
norvegicus]
Length = 943
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 296/896 (33%), Positives = 475/896 (53%), Gaps = 91/896 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 69 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 126
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 127 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 186
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 187 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 241
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 242 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 299
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 300 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 359
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 360 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 419
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 420 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 476
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 477 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSA 536
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G++ G P G GR ++ L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 537 EGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 595
Query: 542 KVVTVDRSMISDNVV-----VSTPYRDTPRYGMGSETPMH--PSRTPLHPYMTPMRD--- 591
+ ++VDR ++ +++ Y TP Y GS+TPM+ SRTP++ TP++D
Sbjct: 596 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMY--GSQTPMYGSGSRTPMYGSQTPLQDGSR 653
Query: 592 ----AGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG------ 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 654 TPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQ 713
Query: 633 -----------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRD 672
+PQY P +P + A Y AP+P + +P P
Sbjct: 714 TPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSP 773
Query: 673 SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD- 728
+ ++P+ Y P TP PM AS P G PMTPG GG + +P G +
Sbjct: 774 AGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 829
Query: 729 NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIE 782
N W DI V+ + +V GVIR V G C V L S +I++ +E
Sbjct: 830 NSSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLE 886
Query: 783 IVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 837
+ P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 887 PITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKLLE 942
>gi|74144580|dbj|BAE27278.1| unnamed protein product [Mus musculus]
Length = 1082
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 296/896 (33%), Positives = 475/896 (53%), Gaps = 91/896 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 208 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 265
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 266 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 325
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 326 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 380
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 381 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 438
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 439 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 498
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 499 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 558
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 559 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 615
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 616 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSA 675
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G++ G P G GR ++ L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 676 EGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 734
Query: 542 KVVTVDRSMISDNVV-----VSTPYRDTPRYGMGSETPMH--PSRTPLHPYMTPMRD--- 591
+ ++VDR ++ +++ Y TP Y GS+TPM+ SRTP++ TP++D
Sbjct: 735 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMY--GSQTPMYGSGSRTPMYGSQTPLQDGSR 792
Query: 592 ----AGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG------ 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 793 TPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQ 852
Query: 633 -----------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRD 672
+PQY P +P + A Y AP+P + +P P
Sbjct: 853 TPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSP 912
Query: 673 SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD- 728
+ ++P+ Y P TP PM AS P G PMTPG GG + +P G +
Sbjct: 913 AGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 968
Query: 729 NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIE 782
N W DI V+ + +V GVIR V G C V L S +I++ +E
Sbjct: 969 NSSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLE 1025
Query: 783 IVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 837
+ P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 1026 PITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKLLE 1081
>gi|291241653|ref|XP_002740721.1| PREDICTED: suppressor of Ty 5 homolog [Saccoglossus kowalevskii]
Length = 1095
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 311/892 (34%), Positives = 478/892 (53%), Gaps = 87/892 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SVIA++ LK YIY+E+ K+ HVK A +G+ N+ ++Q+ +VPI+EM DVL V
Sbjct: 226 LQIKSVIAVEGLKGYIYVESYKQTHVKHAIEGIGNLRLGLWTQQ--MVPIKEMPDVLKVV 283
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL---QALANKLEGRE 123
+ + L +WVR+K G +K DLA+V V+ + +VT+KL+PR+D + +A +
Sbjct: 284 KEVVTLKPKSWVRLKRGVFKDDLAQVDYVEPAQNQVTLKLVPRVDYSRPRGIARTATDNQ 343
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+K+ P + +VD R + V GD+ G + GFLYKT +M +I
Sbjct: 344 EKRKRNKKPTQKLFDVDAIRAIGGEVS-----TDGDFLIFEGNRYSRRGFLYKTFAMSAI 398
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGW 243
A+ I+PT ELEKF EN + ++ S + ++ + GD+V VI+G+L +L+G
Sbjct: 399 IAEGIKPTLSELEKFEDQPENLDVELVPESKK-SEKQLHNLAPGDSVEVIEGELVHLQGK 457
Query: 244 VEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHV 303
+ VD + + I P+ + L + L ++EL K+F G+HVKV+ G G TG++++VE ++
Sbjct: 458 IIGVDGDKITIMPKHEDLKEPLDFPARELRKHFRMGDHVKVIGGRYEGDTGLIVRVEDNM 517
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQ 363
+I+ SD T +++V D+ +E+++G+ +G +E DLV LD + GVI+R+E E+FQ
Sbjct: 518 VILFSDLTMHELKVLPRDLQLCTEMSSGVDSLGQFEWGDLVQLDPQTVGVIVRLERESFQ 577
Query: 364 VLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEH 422
VL ++ VK + + K E ++ V D +N + VKD+V++++GP G+QG V+H
Sbjct: 578 VLNM---HGKLNNVKHQAVSQKKESRNAVALDAEQNNIQVKDIVKVIDGPHSGRQGEVKH 634
Query: 423 IYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT-PPRIPQS 481
IYR F+H R E+ G ++ V+ GGSR D S + S P P S
Sbjct: 635 IYRSFAFLHSRLMTENGGIFVCRTRHIVLAGGSRP---AQIDPVSGYMSPHIGSPAHPGS 691
Query: 482 PGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQ 540
G G G GRG D L+G TV++R GP+KGY G V D + RVEL +
Sbjct: 692 GGVRGGGRGGGQGGGGRGRGRRDMELIGQTVRIREGPFKGYIGIVKDATESTARVELHTN 751
Query: 541 MKVVTVDRSMIS-----DNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRD---- 591
K ++VD++ ++ + +T YR TP + +TPM+ SRTP++ TP+ D
Sbjct: 752 CKTISVDKNRLNPVNQPTSRGSTTSYRHTPLH--PGQTPMYGSRTPMYGSQTPLHDGSRT 809
Query: 592 ---AGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDG-------NPGSWGT----SPQY 637
TP+HDG RTP + AW+P +P R + D +P GT +P Y
Sbjct: 810 PHYGSQTPLHDGSRTPGQTGAWDPTNRNTPARTDEFDYRFDEPTPSPAYGGTPNPATPGY 869
Query: 638 QPGSPPSRA-YEAPTPGSGWASTPGGNYSDAGTPRDSSST-----YVNAPSP--YLPS-T 688
+PPS Y TPGS ST + +P SST Y PSP Y P+ +
Sbjct: 870 SADTPPSNGPYTPATPGS---STMYSSSDHTYSPYQHSSTPSPGGYQGTPSPANYQPAPS 926
Query: 689 PGGQPMTPNSA---SYLPG------TPGGQPMTPGT---GGLDAMSPVIGAD---NEGPW 733
PGG TP+ A S PG +PGG PMTPG GG + ++P D +E
Sbjct: 927 PGGYQPTPSPAYQQSPSPGGYQLTPSPGGYPMTPGAPSPGGFNPLTPGASLDSGSSEWQT 986
Query: 734 FMPDILVRRSGEESV----VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKT 789
++ V+ + E+S +GVIR + G C V + G + + +E V P K
Sbjct: 987 IHIEVKVKATHEDSALIYKIGVIRGI-SGGMCSVFIPDEGR--VVNVHSDHLEPVMPSKQ 1043
Query: 790 DKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS----LDVKILDMAILAKLAQ 837
DK+K++ G R +TG LI +DG DGIVK+D + + +KIL + L K +
Sbjct: 1044 DKVKVILGEDRESTGTLINIDGQDGIVKMDQAVGSDVQLKILHLGHLGKFVE 1095
>gi|328927069|ref|NP_001076908.2| transcription elongation factor SPT5 [Bos taurus]
gi|157279187|gb|AAI34447.1| SUPT5H protein [Bos taurus]
Length = 1083
Score = 418 bits (1075), Expect = e-114, Method: Compositional matrix adjust.
Identities = 297/905 (32%), Positives = 462/905 (51%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 497 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 556
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 557 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 613
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 614 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 664
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 665 ISSPMHPSAGGQRGGFGSPGGGGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 724
Query: 530 GQSVRVELESQMKVVTVDRSMISD----------NVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 725 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMASTYGRTPMYGSQTPMYGSGSRTPMYG 784
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 785 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 844
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 845 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 904
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS PG G PMTPG GG +
Sbjct: 905 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPGPVGYSPMTPGAPSPGGYN 960
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 961 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1019
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1020 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1077
Query: 833 AKLAQ 837
KL +
Sbjct: 1078 GKLLE 1082
>gi|74138739|dbj|BAE27184.1| unnamed protein product [Mus musculus]
Length = 1082
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 294/894 (32%), Positives = 468/894 (52%), Gaps = 87/894 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA ++ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 208 LQIKSVVAPEHVKGYIYVEAYEQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 265
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 266 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 325
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 326 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 380
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 381 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 438
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 439 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 498
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 499 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 558
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 559 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 615
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 616 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSA 675
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G++ G P G GR ++ L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 676 EGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 734
Query: 542 KVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTPM 589
+ ++VDR ++ + TP TP YG GS TPM+ S+TPL
Sbjct: 735 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTP 794
Query: 590 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG-------- 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 795 HYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTP 854
Query: 633 ---------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSS 674
+PQY P +P + A Y AP+P + +P P +
Sbjct: 855 GYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAG 914
Query: 675 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD-NE 730
++P+ Y P TP PM AS P G PMTPG GG + +P G + N
Sbjct: 915 YQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNS 970
Query: 731 GPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIV 784
W DI V+ + +V GVIR V G C V L S +I++ +E +
Sbjct: 971 SDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPI 1027
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 837
P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 1028 TPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKLLE 1081
>gi|2723380|dbj|BAA24075.1| DSIF p160 [Homo sapiens]
Length = 1087
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTRSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|301784031|ref|XP_002927427.1| PREDICTED: transcription elongation factor SPT5-like isoform 2
[Ailuropoda melanoleuca]
Length = 1082
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/904 (32%), Positives = 461/904 (50%), Gaps = 105/904 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 497 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 556
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 557 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 613
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 614 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 664
Query: 484 RYSRGGPPAGGRNRGGRGGH-------------DALVGTTVKVRLGPYKGYRGRVVDVKG 530
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 665 ISSPMHPSAGGQRGGFGSPGGGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATE 724
Query: 531 QSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPS 578
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+ S
Sbjct: 725 STARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGS 784
Query: 579 RTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPG 629
+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 785 QTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQ 844
Query: 630 SWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGN 663
++G +PQY P +P + A Y AP+P + +P
Sbjct: 845 AYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQ 904
Query: 664 YSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDA 720
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 905 SYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNP 960
Query: 721 MSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDT 773
+P G + N W DI V+ + VV GVIR V G C V L S +
Sbjct: 961 HTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVS 1019
Query: 774 ITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILA 833
I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1020 ISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLG 1077
Query: 834 KLAQ 837
KL +
Sbjct: 1078 KLLE 1081
>gi|440910334|gb|ELR60142.1| Transcription elongation factor SPT5 [Bos grunniens mutus]
Length = 1083
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 497 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 556
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 557 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 613
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 614 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 664
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 665 ISSPMHPSAGGQRGGFGSPGGGGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 724
Query: 530 GQSVRVELESQMKVVTVDRSMISD----------NVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 725 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMASTYGRTPMYGSQTPMYGSGSRTPMYG 784
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 785 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 844
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 845 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 904
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 905 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 960
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 961 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1019
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1020 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1077
Query: 833 AKLAQ 837
KL +
Sbjct: 1078 GKLLE 1082
>gi|432090699|gb|ELK24039.1| Transcription elongation factor SPT5 [Myotis davidii]
Length = 1215
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 463/905 (51%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 338 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 395
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ +A
Sbjct: 396 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWIA 455
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 456 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 510
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 511 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 568
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 569 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 628
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 629 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 688
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 689 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 745
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ D F P SP
Sbjct: 746 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPR-DVTNFTLGGF--------APMSPR 796
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 797 ISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 856
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ ++ TP TP YG GS TPM+
Sbjct: 857 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMNSTYGRTPMYGSQTPMYGSGSRTPMYG 916
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 917 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 976
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 977 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 1036
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 1037 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 1092
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V+ G C V L S
Sbjct: 1093 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVM-GGMCSVYLKDSEKVV 1151
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ ++G DGIV +D+ KIL++ L
Sbjct: 1152 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSINGEDGIVHMDLDEQFKILNLRFL 1209
Query: 833 AKLAQ 837
KL +
Sbjct: 1210 GKLLE 1214
>gi|332855586|ref|XP_003316394.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Pan
troglodytes]
Length = 1083
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 497 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 556
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 557 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 613
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 614 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 664
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 665 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 724
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 725 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 784
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 785 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 844
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 845 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 904
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 905 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 960
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 961 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1019
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1020 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1077
Query: 833 AKLAQ 837
KL +
Sbjct: 1078 GKLLE 1082
>gi|301784029|ref|XP_002927426.1| PREDICTED: transcription elongation factor SPT5-like isoform 1
[Ailuropoda melanoleuca]
Length = 1086
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/904 (32%), Positives = 461/904 (50%), Gaps = 105/904 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH-------------DALVGTTVKVRLGPYKGYRGRVVDVKG 530
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATE 728
Query: 531 QSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPS 578
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+ S
Sbjct: 729 STARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGS 788
Query: 579 RTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPG 629
+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 QTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQ 848
Query: 630 SWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGN 663
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 AYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQ 908
Query: 664 YSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDA 720
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 SYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNP 964
Query: 721 MSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDT 773
+P G + N W DI V+ + VV GVIR V G C V L S +
Sbjct: 965 HTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVS 1023
Query: 774 ITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILA 833
I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 ISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLG 1081
Query: 834 KLAQ 837
KL +
Sbjct: 1082 KLLE 1085
>gi|426388682|ref|XP_004060762.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Gorilla
gorilla gorilla]
Length = 1115
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 238 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 295
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 296 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 355
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 356 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 410
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 411 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 468
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 469 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 528
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 529 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 588
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 589 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 645
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 646 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 696
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 697 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 756
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 757 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 816
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 817 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 876
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 877 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 936
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 937 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 992
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 993 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1051
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1052 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1109
Query: 833 AKLAQ 837
KL +
Sbjct: 1110 GKLLE 1114
>gi|195546902|ref|NP_001124297.1| transcription elongation factor SPT5 isoform b [Homo sapiens]
gi|208965586|dbj|BAG72807.1| suppressor of Ty 5 homolog [synthetic construct]
Length = 1083
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 497 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 556
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 557 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 613
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 614 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 664
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 665 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 724
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 725 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 784
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 785 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 844
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 845 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 904
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 905 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 960
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 961 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1019
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1020 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1077
Query: 833 AKLAQ 837
KL +
Sbjct: 1078 GKLLE 1082
>gi|355703540|gb|EHH30031.1| hypothetical protein EGK_10603 [Macaca mulatta]
Length = 1087
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|62088094|dbj|BAD92494.1| suppressor of Ty 5 homolog variant [Homo sapiens]
Length = 1116
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 239 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 296
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 297 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 356
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 357 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 411
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 412 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 469
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 470 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 529
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 530 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 589
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 590 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 646
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 647 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 697
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 698 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 757
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 758 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 817
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 818 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 877
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 878 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 937
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 938 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 993
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 994 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1052
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1053 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1110
Query: 833 AKLAQ 837
KL +
Sbjct: 1111 GKLLE 1115
>gi|281344078|gb|EFB19662.1| hypothetical protein PANDA_017202 [Ailuropoda melanoleuca]
Length = 980
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/904 (32%), Positives = 461/904 (50%), Gaps = 105/904 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 104 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 161
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 162 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 221
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 222 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 276
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 277 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 334
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 335 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 394
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 395 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 454
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 455 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 511
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 512 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 562
Query: 484 RYSRGGPPAGGRNRGGRGGH-------------DALVGTTVKVRLGPYKGYRGRVVDVKG 530
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 563 ISSPMHPSAGGQRGGFGSPGGGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATE 622
Query: 531 QSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPS 578
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+ S
Sbjct: 623 STARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGS 682
Query: 579 RTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPG 629
+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 683 QTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQ 742
Query: 630 SWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGN 663
++G +PQY P +P + A Y AP+P + +P
Sbjct: 743 AYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQ 802
Query: 664 YSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDA 720
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 803 SYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNP 858
Query: 721 MSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDT 773
+P G + N W DI V+ + VV GVIR V G C V L S +
Sbjct: 859 HTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVS 917
Query: 774 ITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILA 833
I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 918 ISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLG 975
Query: 834 KLAQ 837
KL +
Sbjct: 976 KLLE 979
>gi|20149524|ref|NP_003160.2| transcription elongation factor SPT5 isoform a [Homo sapiens]
gi|161169023|ref|NP_001104490.1| transcription elongation factor SPT5 isoform a [Homo sapiens]
gi|195546900|ref|NP_001124296.1| transcription elongation factor SPT5 isoform a [Homo sapiens]
gi|74735318|sp|O00267.1|SPT5H_HUMAN RecName: Full=Transcription elongation factor SPT5; Short=hSPT5;
AltName: Full=DRB sensitivity-inducing factor 160 kDa
subunit; Short=DSIF p160; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit; AltName: Full=Tat-cotransactivator 1
protein; Short=Tat-CT1 protein
gi|2065177|emb|CAA73326.1| Supt5h protein [Homo sapiens]
gi|4104824|gb|AAD02179.1| transcription factor Tat-CT1 [Homo sapiens]
gi|18848308|gb|AAH24203.1| Suppressor of Ty 5 homolog (S. cerevisiae) [Homo sapiens]
gi|119577304|gb|EAW56900.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_b [Homo
sapiens]
gi|124000571|gb|ABM87794.1| suppressor of Ty 5 homolog (S. cerevisiae) [synthetic construct]
Length = 1087
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|380798991|gb|AFE71371.1| transcription elongation factor SPT5 isoform b, partial [Macaca
mulatta]
Length = 1031
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 154 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 211
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 212 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 271
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 272 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 326
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 327 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 384
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 385 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 444
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 445 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 504
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 505 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 561
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 562 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 612
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 613 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 672
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 673 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 732
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 733 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 792
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 793 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 852
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 853 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 908
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 909 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 967
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 968 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1025
Query: 833 AKLAQ 837
KL +
Sbjct: 1026 GKLLE 1030
>gi|417405815|gb|JAA49607.1| Putative rna polymerase ii transcription elongation factor
dsif/supt5h/spt5 [Desmodus rotundus]
Length = 1087
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|335289667|ref|XP_003355949.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Sus
scrofa]
gi|335289669|ref|XP_003355950.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Sus
scrofa]
gi|335289671|ref|XP_003355951.1| PREDICTED: transcription elongation factor SPT5 isoform 3 [Sus
scrofa]
Length = 1087
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|332855584|ref|XP_512652.3| PREDICTED: transcription elongation factor SPT5 isoform 2 [Pan
troglodytes]
gi|397482119|ref|XP_003812280.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Pan
paniscus]
gi|397482121|ref|XP_003812281.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Pan
paniscus]
gi|410264254|gb|JAA20093.1| suppressor of Ty 5 homolog [Pan troglodytes]
gi|410302772|gb|JAA29986.1| suppressor of Ty 5 homolog [Pan troglodytes]
gi|410302774|gb|JAA29987.1| suppressor of Ty 5 homolog [Pan troglodytes]
Length = 1087
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|388490406|ref|NP_001253880.1| transcription elongation factor SPT5 [Macaca mulatta]
gi|402905510|ref|XP_003915562.1| PREDICTED: transcription elongation factor SPT5 [Papio anubis]
gi|383411229|gb|AFH28828.1| transcription elongation factor SPT5 isoform a [Macaca mulatta]
Length = 1087
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|73947648|ref|XP_533673.2| PREDICTED: transcription elongation factor SPT5 isoform 1 [Canis
lupus familiaris]
Length = 1087
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|410983050|ref|XP_003997857.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Felis
catus]
gi|410983052|ref|XP_003997858.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Felis
catus]
gi|355722676|gb|AES07650.1| suppressor of Ty 5-like protein [Mustela putorius furo]
Length = 1087
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|384939612|gb|AFI33411.1| transcription elongation factor SPT5 isoform a [Macaca mulatta]
Length = 1087
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPPSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|426388680|ref|XP_004060761.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Gorilla
gorilla gorilla]
Length = 1140
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 263 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 320
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 321 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 380
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 381 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 435
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 436 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 493
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 494 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 553
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 554 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 613
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 614 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 670
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 671 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 721
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 722 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 781
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 782 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 841
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 842 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 901
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 902 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 961
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 962 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 1017
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 1018 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1076
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1077 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1134
Query: 833 AKLAQ 837
KL +
Sbjct: 1135 GKLLE 1139
>gi|338710414|ref|XP_003362360.1| PREDICTED: transcription elongation factor SPT5 isoform 3 [Equus
caballus]
Length = 1083
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 299/900 (33%), Positives = 467/900 (51%), Gaps = 96/900 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 497 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 556
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 557 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 613
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ R+ ++ PRI SP
Sbjct: 614 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKP---RDVTNFTVGGFAPMSPRI-SSPM 669
Query: 484 RYSRGGPPAGGRNRGGRGGH---------DALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
S GG G + GG G + L+G TV++ GPYKGY G V D + R
Sbjct: 670 HPSTGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTAR 729
Query: 535 VELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPL 582
VEL S + ++VDR ++ + TP TP YG GS TPM+ S+TPL
Sbjct: 730 VELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPL 789
Query: 583 HPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG- 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 790 QDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGG 849
Query: 633 ----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDA 667
+PQY P +P + A Y AP+P + +P
Sbjct: 850 TPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQ 909
Query: 668 GTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPV 724
P + ++P+ Y P TP PM AS P G PMTPG GG + +P
Sbjct: 910 VAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPG 965
Query: 725 IGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITAL 777
G + N W DI V+ + VV GVIR V G C V L S +I++
Sbjct: 966 SGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS- 1023
Query: 778 PNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
+E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 1024 -EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 1082
>gi|119577300|gb|EAW56896.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|119577301|gb|EAW56897.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|119577302|gb|EAW56898.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|119577303|gb|EAW56899.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_a [Homo
sapiens]
gi|194382692|dbj|BAG64516.1| unnamed protein product [Homo sapiens]
Length = 946
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 69 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 126
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 127 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 186
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 187 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 241
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 242 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 299
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 300 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 359
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 360 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 419
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 420 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 476
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 477 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 527
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 528 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 587
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 588 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 647
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 648 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 707
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 708 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 767
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 768 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 823
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 824 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 882
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 883 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 940
Query: 833 AKLAQ 837
KL +
Sbjct: 941 GKLLE 945
>gi|380798993|gb|AFE71372.1| transcription elongation factor SPT5 isoform a, partial [Macaca
mulatta]
Length = 1035
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 158 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 215
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 216 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 275
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 276 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 330
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 331 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 388
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 389 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 448
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 449 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 508
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 509 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 565
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 566 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 616
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 617 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 676
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 677 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 736
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 737 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 796
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 797 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 856
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 857 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 912
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 913 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 971
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 972 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1029
Query: 833 AKLAQ 837
KL +
Sbjct: 1030 GKLLE 1034
>gi|194215430|ref|XP_001915972.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Equus
caballus]
gi|338710411|ref|XP_003362359.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Equus
caballus]
Length = 1087
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 299/900 (33%), Positives = 467/900 (51%), Gaps = 96/900 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ R+ ++ PRI SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKP---RDVTNFTVGGFAPMSPRI-SSPM 673
Query: 484 RYSRGGPPAGGRNRGGRGGH---------DALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
S GG G + GG G + L+G TV++ GPYKGY G V D + R
Sbjct: 674 HPSTGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTAR 733
Query: 535 VELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPL 582
VEL S + ++VDR ++ + TP TP YG GS TPM+ S+TPL
Sbjct: 734 VELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPL 793
Query: 583 HPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG- 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 794 QDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGG 853
Query: 633 ----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDA 667
+PQY P +P + A Y AP+P + +P
Sbjct: 854 TPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQ 913
Query: 668 GTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPV 724
P + ++P+ Y P TP PM AS P G PMTPG GG + +P
Sbjct: 914 VAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPG 969
Query: 725 IGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITAL 777
G + N W DI V+ + VV GVIR V G C V L S +I++
Sbjct: 970 SGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS- 1027
Query: 778 PNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
+E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 1028 -EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 1086
>gi|194381082|dbj|BAG64109.1| unnamed protein product [Homo sapiens]
Length = 1065
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 188 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 245
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 246 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 305
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 306 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 360
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 361 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 418
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 419 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 478
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 479 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 538
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 539 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 595
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 596 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 646
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 647 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 706
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 707 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 766
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 767 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 826
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 827 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 886
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 887 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 942
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 943 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1001
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1002 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1059
Query: 833 AKLAQ 837
KL +
Sbjct: 1060 GKLLE 1064
>gi|403305268|ref|XP_003943189.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1083
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 295/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K++PRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMVPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 497 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 556
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 557 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 613
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 614 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 664
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 665 ISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 724
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 725 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 784
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 785 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 844
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 845 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 904
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 905 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 960
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 961 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1019
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1020 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1077
Query: 833 AKLAQ 837
KL +
Sbjct: 1078 GKLLE 1082
>gi|426242877|ref|XP_004015297.1| PREDICTED: transcription elongation factor SPT5 isoform 2 [Ovis
aries]
Length = 1076
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 303/900 (33%), Positives = 467/900 (51%), Gaps = 103/900 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 497 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 556
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 557 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 613
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 614 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 664
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 665 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 724
Query: 530 GQSVRVELESQMKVVTVDRSMISD----------NVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 725 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMASTYGRTPMYGSQTPMYGSGSRTPMYG 784
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 785 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 844
Query: 629 GSWGTSPQYQ-PGSP-PSR-----AYEAPTPG----------SGWAS----TPGGNYSDA 667
++G +P Q PG P PS Y TPG S +A+ P GN+ A
Sbjct: 845 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPAQPQPSGNHQVA 904
Query: 668 GTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPV 724
+P +T+ +P+ Y P TP PM AS P G PMTPG GG + +P
Sbjct: 905 PSPAGYQNTH--SPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPG 958
Query: 725 IGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITAL 777
G + N W DI V+ + VV GVIR V G C V L S +I++
Sbjct: 959 SGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS- 1016
Query: 778 PNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
+E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 1017 -EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 1075
>gi|403305266|ref|XP_003943188.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403305270|ref|XP_003943190.1| PREDICTED: transcription elongation factor SPT5 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 1087
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 295/905 (32%), Positives = 461/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K++PRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMVPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|426242875|ref|XP_004015296.1| PREDICTED: transcription elongation factor SPT5 isoform 1 [Ovis
aries]
Length = 1080
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 303/900 (33%), Positives = 467/900 (51%), Gaps = 103/900 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMISD----------NVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMASTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWGTSPQYQ-PGSP-PSR-----AYEAPTPG----------SGWAS----TPGGNYSDA 667
++G +P Q PG P PS Y TPG S +A+ P GN+ A
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPAQPQPSGNHQVA 908
Query: 668 GTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPV 724
+P +T+ +P+ Y P TP PM AS P G PMTPG GG + +P
Sbjct: 909 PSPAGYQNTH--SPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPG 962
Query: 725 IGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITAL 777
G + N W DI V+ + VV GVIR V G C V L S +I++
Sbjct: 963 SGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS- 1020
Query: 778 PNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
+E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 1021 -EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 1079
>gi|344236946|gb|EGV93049.1| Transcription elongation factor SPT5 [Cricetulus griseus]
Length = 944
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/896 (33%), Positives = 473/896 (52%), Gaps = 90/896 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 69 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 126
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 127 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 186
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 187 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 241
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + T ++ +F GD V V +G+L NL+G V
Sbjct: 242 TEGVKPTLSELEKFEDQPEGIDLEVVTEGT--GKEREHNFQPGDNVEVCEGELINLQGKV 299
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 300 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 359
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 360 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 419
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 420 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 476
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P
Sbjct: 477 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSG 536
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G++ G P GG +RG + L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 537 EGQHGGFGSPGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 596
Query: 542 KVVTVDRSMISDNVV-----VSTPYRDTPRYGMGSETPMH--PSRTPLHPYMTPMRD--- 591
+ ++VDR ++ +++ Y TP Y GS+TPM+ SRTP++ TP++D
Sbjct: 597 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMY--GSQTPMYGSGSRTPMYGSQTPLQDGSR 654
Query: 592 ----AGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG------ 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 655 TPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQ 714
Query: 633 -----------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRD 672
+PQY P +P + A Y AP+P + +P P
Sbjct: 715 TPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSP 774
Query: 673 SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGADN 729
+ ++P+ Y P TP PM AS P G PMTPG GG + +P G +
Sbjct: 775 AGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQ 830
Query: 730 EGP-WFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIE 782
W DI V+ + VV GVIR V G C V L S +I++ +E
Sbjct: 831 SSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLE 887
Query: 783 IVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 837
+ P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 888 PITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKLLE 943
>gi|291389983|ref|XP_002711495.1| PREDICTED: suppressor of Ty 5 homolog isoform 1 [Oryctolagus
cuniculus]
Length = 1083
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 293/893 (32%), Positives = 465/893 (52%), Gaps = 85/893 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 209 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 266
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 267 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 326
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 327 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 381
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ + GD V V +G+L NL+G +
Sbjct: 382 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNLQPGDNVEVCEGELINLQGKI 439
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD V I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 440 LSVDGNKVTIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 499
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E ++V LD + GVI+R+E E FQV
Sbjct: 500 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGEMVQLDPQTVGVIVRLERETFQV 559
Query: 365 LKGVPDRPEVALVKLREIKCKLEKK-SNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + + D +N + VKD+V++++GP G++G + +I
Sbjct: 560 LNMY---GKVVTVRHQAVTRKKDNRFAESLDSEQNNIHVKDIVKVIDGPHSGREGEIRYI 616
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
+ F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 617 FHIFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDMTNFTVGGFAPMSPRISSPMHPSA 676
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G+ G P GG +RG + L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 677 GGQRGDFGSPGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 736
Query: 542 KVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTPM 589
+ ++VDR ++ + TP TP YG GS TPM+ S+TPL
Sbjct: 737 QTISVDRQRLTTVGSQRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTP 796
Query: 590 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG-------- 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 797 HYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTP 856
Query: 633 ---------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSS 674
+PQY P +P + A Y AP+P + +P P +
Sbjct: 857 GYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAG 916
Query: 675 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD-NE 730
++P+ Y P TP PM AS P G PMTPG GG + +P G + N
Sbjct: 917 YQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNS 972
Query: 731 GPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIV 784
W DI V+ + VV GVIR V G C V L S +I++ +E +
Sbjct: 973 SDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPI 1029
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 1030 TPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 1082
>gi|197097560|ref|NP_001127053.1| transcription elongation factor SPT5 [Pongo abelii]
gi|75040884|sp|Q5R405.1|SPT5H_PONAB RecName: Full=Transcription elongation factor SPT5; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit
gi|55733669|emb|CAH93511.1| hypothetical protein [Pongo abelii]
Length = 1083
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 460/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GREREHNFQPGDNVEVCEGELINLQGKI 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 497 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 556
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 557 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 613
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 614 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 664
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 665 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 724
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 725 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 784
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 785 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 844
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 845 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 904
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 905 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 960
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 961 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1019
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D +KIL++ L
Sbjct: 1020 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDPDEQLKILNLRFL 1077
Query: 833 AKLAQ 837
KL +
Sbjct: 1078 GKLLE 1082
>gi|291389985|ref|XP_002711496.1| PREDICTED: suppressor of Ty 5 homolog isoform 2 [Oryctolagus
cuniculus]
Length = 1079
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 293/893 (32%), Positives = 465/893 (52%), Gaps = 85/893 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 205 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 262
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 263 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 322
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 323 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 377
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ + GD V V +G+L NL+G +
Sbjct: 378 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNLQPGDNVEVCEGELINLQGKI 435
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD V I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 436 LSVDGNKVTIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 495
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E ++V LD + GVI+R+E E FQV
Sbjct: 496 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGEMVQLDPQTVGVIVRLERETFQV 555
Query: 365 LKGVPDRPEVALVKLREIKCKLEKK-SNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + + D +N + VKD+V++++GP G++G + +I
Sbjct: 556 LNMY---GKVVTVRHQAVTRKKDNRFAESLDSEQNNIHVKDIVKVIDGPHSGREGEIRYI 612
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
+ F+H + +E+ G K+ V+ GGS+ N ++ + + P P +
Sbjct: 613 FHIFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDMTNFTVGGFAPMSPRISSPMHPSA 672
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G+ G P GG +RG + L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 673 GGQRGDFGSPGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 732
Query: 542 KVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTPM 589
+ ++VDR ++ + TP TP YG GS TPM+ S+TPL
Sbjct: 733 QTISVDRQRLTTVGSQRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTP 792
Query: 590 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG-------- 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 793 HYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTP 852
Query: 633 ---------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSS 674
+PQY P +P + A Y AP+P + +P P +
Sbjct: 853 GYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAG 912
Query: 675 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD-NE 730
++P+ Y P TP PM AS P G PMTPG GG + +P G + N
Sbjct: 913 YQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNS 968
Query: 731 GPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIV 784
W DI V+ + VV GVIR V G C V L S +I++ +E +
Sbjct: 969 SDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPI 1025
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 1026 TPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 1078
>gi|354483380|ref|XP_003503872.1| PREDICTED: transcription elongation factor SPT5 isoform 1
[Cricetulus griseus]
gi|354483382|ref|XP_003503873.1| PREDICTED: transcription elongation factor SPT5 isoform 2
[Cricetulus griseus]
Length = 889
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 295/894 (32%), Positives = 466/894 (52%), Gaps = 86/894 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 14 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 71
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 72 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 131
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 132 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 186
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + T ++ +F GD V V +G+L NL+G V
Sbjct: 187 TEGVKPTLSELEKFEDQPEGIDLEVVTEGT--GKEREHNFQPGDNVEVCEGELINLQGKV 244
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 245 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 304
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 305 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 364
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D ++N + VKD+V++++GP G++G + H+
Sbjct: 365 LNM---HGKVVTVRHQAVTQKKDNRFAVALDSDQNNIHVKDIVKVIDGPHSGREGEIRHL 421
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRIPQS 481
YR F+H + +E+ G K+ V+ GGS+ N ++ + + P P
Sbjct: 422 YRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFTPMSPRISSPMHPSG 481
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G++ G P GG +RG + L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 482 EGQHGGFGSPGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTC 541
Query: 542 KVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTPM 589
+ ++VDR ++ + TP TP YG GS TPM+ S+TPL
Sbjct: 542 QTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTP 601
Query: 590 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG-------- 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 602 HYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTP 661
Query: 633 ---------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSS 674
+PQY P +P + A Y AP+P + +P P +
Sbjct: 662 GYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAG 721
Query: 675 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGADNEG 731
++P+ Y P TP PM AS P G PMTPG GG + +P G +
Sbjct: 722 YQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQSS 777
Query: 732 P-WFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIV 784
W DI V+ + VV GVIR V G C V L S +I++ +E +
Sbjct: 778 SDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPI 834
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDMAILAKLAQ 837
P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++ L KL +
Sbjct: 835 TPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNLRFLGKLLE 888
>gi|410225316|gb|JAA09877.1| suppressor of Ty 5 homolog [Pan troglodytes]
gi|410225318|gb|JAA09878.1| suppressor of Ty 5 homolog [Pan troglodytes]
Length = 1087
Score = 414 bits (1063), Expect = e-112, Method: Compositional matrix adjust.
Identities = 296/905 (32%), Positives = 460/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPPHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|431920164|gb|ELK18203.1| Transcription elongation factor SPT5 [Pteropus alecto]
Length = 1083
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 295/905 (32%), Positives = 460/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + +T ++ +F GD V V +G+L NL+G +
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTENT--GKEREHNFQPGDNVEVCEGELINLQGKI 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 497 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 556
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 557 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 613
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 614 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 664
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 665 ISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 724
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 725 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 784
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 785 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 844
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 845 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 904
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 905 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 960
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 961 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1019
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D +KIL++ L
Sbjct: 1020 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDPDEQLKILNLRFL 1077
Query: 833 AKLAQ 837
KL +
Sbjct: 1078 GKLLE 1082
>gi|307184945|gb|EFN71210.1| Transcription elongation factor SPT5 [Camponotus floridanus]
Length = 1096
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 314/894 (35%), Positives = 459/894 (51%), Gaps = 87/894 (9%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAV 65
G LQI+SV+A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V
Sbjct: 225 GEPLQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRV 284
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----E 120
+ L WVR+K G YK D+A+V VD + +V +KL+PRID L E
Sbjct: 285 VKEQTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSE 344
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
+ +KK PP + + + R + V GD+ G + GFLYK +
Sbjct: 345 SEALKRKKKRRPPAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTT 399
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-----FMKGDAVIVIKG 235
+I A+ ++PT ELE+F E E D++ + K+ F GD V V +G
Sbjct: 400 SAIIAEGVKPTLSELERFEEAPEGVEIDLSGAPGTGVSGKEDQALAHSFSNGDNVEVCEG 459
Query: 236 DLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
+L NL+G + +D + + P+ + L + L + EL KYF G+HVKVV+G G TG+
Sbjct: 460 ELINLQGKIVSIDGNMIMVMPKHEELKEALEFQASELRKYFTQGDHVKVVAGRYEGDTGL 519
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
+++VEQ+ +++ SD + ++ V D+ S++ TG+ +G ++ DLV LD + GVI+
Sbjct: 520 IVRVEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDTQTVGVIV 579
Query: 356 RVESEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEG 411
R+E E F VL K V RP+ L K RE K + D +NT+ KD+V++V+G
Sbjct: 580 RLERENFHVLSMHGKVVEARPQ-GLTKRRE-----NKNAVALDSQQNTIQKKDIVKVVDG 633
Query: 412 PCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNS 471
P G+ G ++H+YR F+H R +++ G K+ + GG++ N + + F S
Sbjct: 634 PHAGRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKTNSINSMSPVAGFMS 693
Query: 472 LRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDA---LVGTTVKVRLGPYKGYRGRVVDV 528
R I S G + RGG GR RGG G L+GTT+K+ GPYKG G V D
Sbjct: 694 PRIASPIHPSGGGFGRGGGGGRGRGRGGGSGARRDRELIGTTIKITGGPYKGNVGIVKDA 753
Query: 529 KGQSVRVELESQMKVVTVDRSMISDNVVVST------PYRDTPRYGMGSETPMHP---SR 579
+ RVEL S + ++VDRS I+ NV V T Y TP YG G +TPM+ S+
Sbjct: 754 TETTARVELHSTCQTISVDRSHIA-NVGVPTKDGGFSSYNRTPAYGAGGQTPMYARDGSK 812
Query: 580 TPLHPYMTPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW 631
TP+H TPM + G+ TP HDG RTP + AW+P +P R N DG
Sbjct: 813 TPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEE 872
Query: 632 GTSPQYQPGSPPSRAYEAP-TPGSGWAS-------TPGGNYSDAGTPRDSSSTYVNAPSP 683
G SP Y PG PP+ P TPG+ + S P + + + T S + YV PSP
Sbjct: 873 GGSPGYAPGYPPTGGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPAGYVATPSP 932
Query: 684 Y---LPSTPGGQPMTPNSASYLPGTPG--GQPMTPGT--GGLDA--MSPVIGADNEGPWF 734
++P G TP+ SY P TPG G P P T GLD S + G+D W
Sbjct: 933 SGTGYTTSPHGAFATPSPMSYSPMTPGVAGSPYNPQTPGSGLDTGVGSSISGSD----WH 988
Query: 735 MPDILVR---------RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNE-IEIV 784
DI VR +G+++V+ I G C V L + D + L E +E V
Sbjct: 989 TTDIEVRIRDSHDDPALAGQQAVIRGIS----GGMCTVYLPTE---DRVVNLGCEQLEPV 1041
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQP 838
P + D++K++ G R A G L+ +D +G+VK++ ++K L + L K+ P
Sbjct: 1042 VPSRGDRVKVILGEDREAVGTLLSIDNQEGVVKLNTE-EIKFLQLRFLCKMKAP 1094
>gi|348523011|ref|XP_003449017.1| PREDICTED: transcription elongation factor SPT5-like [Oreochromis
niloticus]
Length = 1082
Score = 413 bits (1061), Expect = e-112, Method: Compositional matrix adjust.
Identities = 297/894 (33%), Positives = 462/894 (51%), Gaps = 94/894 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A DH+K YIY+E+ K+ HVK A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 212 LQIKSVVAPDHVKGYIYVESYKQTHVKAAIEGIGNLRMGFWNQQ--MVPIKEMTDVLKVV 269
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRIDL + K+ ++ A
Sbjct: 270 KEVTNLKPKSWVRLKRGLYKDDIAQVDYVEPSQNTISLKMIPRIDLDRIKAKMSLKDWFA 329
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 330 KRKKFKRPPQRLFDAEKIRSLGGEVSH-----DGDFMIFEGNRYSRKGFLFKSFAMSAVI 384
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
++PT ELEKF E + ++ + S ++ + GD V V +G+L NL+G +
Sbjct: 385 TDGVKPTLSELEKFEDQPEGIDLEVVTES---GKEREHNLQAGDNVEVCEGELINLQGKI 441
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L + E+ KYF G+HVKV++G G TG++++VE++ +
Sbjct: 442 LSVDGNKITIMPKHEDLKDPLEFPAHEVRKYFRMGDHVKVIAGRYEGDTGLIVRVEENFV 501
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 502 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 561
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + + + + V D +N++ VKD+V++++GP G++G + H+
Sbjct: 562 LSM---HGKVLTVRHQAVNRRKDNRFAVALDSEQNSIHVKDIVKVIDGPHSGREGEIRHL 618
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+RG F+H + +E+ G K+ V+ GGS+ R+ ++ PRI SP
Sbjct: 619 FRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKP---RDVTNFTVGGFAPMSPRI-SSPM 674
Query: 484 RYSRGGPPAGGRNRGGRGGH-----DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELE 538
+ GG G GG G + L+G TV++ GPYKGY G V D + RVEL
Sbjct: 675 HHGGGGAQQRGGGGGGMGRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELH 734
Query: 539 SQMKVVTVDRSMIS-----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPY 585
S + ++VDR ++ + V TP TP YG+GS TPM+ S+TPLH
Sbjct: 735 STCQTISVDRQRLTTVGGAKRPSGLTSAHVRTPIYGSQTPMYGVGSRTPMYGSQTPLHDG 794
Query: 586 MTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGN----------PGSWGTS- 634
TP+HDG RTP + AW+P P +P R N ED + P ++GT+
Sbjct: 795 SRTPHYGSQTPLHDGSRTPGQSGAWDPSNPNTPSR-NEEDYDFGYDDEPSPSPQAYGTTP 853
Query: 635 ----------------PQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGT 669
PQY P +P + A Y AP+P + +P
Sbjct: 854 NPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYAAPSPQGSYQPSPSPQSYHQVA 913
Query: 670 PRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIG 726
P ++P+ Y P TP PM AS P G PMTPG GG + +P
Sbjct: 914 PSPVGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSN 969
Query: 727 ADNEGP-WFMPDILVRRSGE----ESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEI 781
+ G W DILVR GVIR V G C V + + ++ + +
Sbjct: 970 IEQGGSDWVTTDILVRVKDSFMDLMGQTGVIRSVT-GGMCSVFMQETEK--VVSVSSDHL 1026
Query: 782 EIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
E V P K +K+K++ G R ATG L+ +DG DGIV++++ +KIL++ L +L
Sbjct: 1027 EPVTPTKNNKVKVILGEDREATGILLSIDGDDGIVRMELDDQLKILNLRFLGRL 1080
>gi|1845267|gb|AAC51102.1| SUPT5H [Homo sapiens]
Length = 1087
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 294/905 (32%), Positives = 459/905 (50%), Gaps = 106/905 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++ G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAARFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + W+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGGWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGD 772
+P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVV 1023
Query: 773 TITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAIL 832
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L
Sbjct: 1024 SISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFL 1081
Query: 833 AKLAQ 837
KL +
Sbjct: 1082 GKLLE 1086
>gi|351706478|gb|EHB09397.1| Transcription elongation factor SPT5 [Heterocephalus glaber]
Length = 1094
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 297/902 (32%), Positives = 465/902 (51%), Gaps = 97/902 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 214 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 271
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 272 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 331
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 332 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 386
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 387 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 444
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 445 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 504
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 505 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 564
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP ++G + HI
Sbjct: 565 LNMY---GKVVTVRHQAVTQKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSDREGEIRHI 621
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRI--PQS 481
YR F+H + +E+ G K+ V+ GG + R+ ++ PRI P
Sbjct: 622 YRNFAFLHCKKLVENGGMFVCKTRHLVLAGGLKP---RDVTNFTVGGFAPMSPRISSPMH 678
Query: 482 PGRYSRGGPPAGGRNRGGRGGH------DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRV 535
P + G G + L+G TV++ GPYKGY G V D + RV
Sbjct: 679 PSGGGQHGGFGSPGGSGSGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARV 738
Query: 536 ELESQMKVVTVDRSMIS-----------DNVVVSTPY-RDTPRYGMGSETPMHPSRTPLH 583
EL S + ++VDR ++ N + Y TP YG GS TPM+ S+TPL
Sbjct: 739 ELHSTCQTISVDRQRLTTVGSRRPGGMASNYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQ 798
Query: 584 ---PYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSW 631
+P++ A TP+HDG RTP + AW+P P +P R D+ +P ++
Sbjct: 799 DADKLTSPLQAAVPTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAY 858
Query: 632 G-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYS 665
G +PQY P +P + A Y AP+P + +P
Sbjct: 859 GGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSY 918
Query: 666 DAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMS 722
P + ++P+ Y P TP PM AS P G PMTPG GG + +
Sbjct: 919 HQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHT 974
Query: 723 PVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTIT 775
P G + N W DI V+ + VV GVIR V G C V L S +I+
Sbjct: 975 PGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSIS 1033
Query: 776 ALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL
Sbjct: 1034 S--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKL 1091
Query: 836 AQ 837
+
Sbjct: 1092 LE 1093
>gi|327287408|ref|XP_003228421.1| PREDICTED: transcription elongation factor SPT5-like [Anolis
carolinensis]
Length = 1081
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 305/896 (34%), Positives = 469/896 (52%), Gaps = 93/896 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 209 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQ--MVPIKEMTDVLKVV 266
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + ++++K+IPRID + ++ ++ A
Sbjct: 267 KEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNQISLKMIPRIDFDRIKARMSLKDWFA 326
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 327 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 381
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 382 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 439
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF G+HVKV++G G TG++++VE++ +
Sbjct: 440 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFRMGDHVKVIAGRFEGDTGLIVRVEENFV 499
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD+ + G+I+R+E E FQV
Sbjct: 500 ILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGELVQLDHQTVGIIVRLERETFQV 559
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNV-QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 560 LNMY---GKVVTVRHQAVNRKKDNRFAVASDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 616
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRI--PQS 481
++G F+H + +E+ G + V+ GGS+ R+ ++ PRI P
Sbjct: 617 FKGFAFLHCKKLVENGGMFVCNARHLVLAGGSKP---RDVTNFTIGGFAPMSPRINSPMH 673
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDA-LVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQ 540
P + G GG GRG D L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 674 PSAGGQPGGFGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARVELHST 733
Query: 541 MKVVTVDRS------------MISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTP 588
+ ++VDR M S + TP YG GS TPM+ S+TPLH
Sbjct: 734 CQTISVDRQRLTTVGSRRPGGMTSAHSRTPMYGSQTPMYGSGSRTPMYGSQTPLHDGNRT 793
Query: 589 MRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWGTSPQYQ- 638
TP+HDG RTP + AW+P P +P R D+ +P +G +P Q
Sbjct: 794 PHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEFDYGFDDEPTPSPQGYGGTPNPQT 853
Query: 639 PGSP-PSR-----AYEAPTPGSGWASTPGGNYSDAGTPRDSSS---TYVNAPSP----YL 685
PG P PS Y TPG TP +D +P S +Y +PSP +
Sbjct: 854 PGYPDPSSPQVNPPYNPQTPG-----TPAMYNTDQFSPYAVPSPQGSYQPSPSPQSFHQV 908
Query: 686 PSTPGGQPMTPNSASYLPGTP--------------GGQPMTPGT---GGLDAMSPVIGAD 728
+P G T + ASY P TP G PMTPG G + +P G +
Sbjct: 909 APSPVGYQNTHSPASYHP-TPSPMAYQASPSPSPVGYSPMTPGAPSPGAYNPHTPGSGIE 967
Query: 729 NEGP-WFMPDIL--VRRSGEESVV----GVIREVLPDGSCRVVLGSSGNGDTITALPNEI 781
W DI VR + +S V GVIR V G C V L S +I++ +
Sbjct: 968 QSSSDWVTTDIQVKVRDTYLDSQVVGQTGVIRSVT-GGICSVYLKDSEKVVSISS--EHL 1024
Query: 782 EIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
E V P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 1025 EPVTPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 1080
>gi|229577145|ref|NP_571748.2| transcription elongation factor SPT5 [Danio rerio]
Length = 1084
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 301/905 (33%), Positives = 466/905 (51%), Gaps = 97/905 (10%)
Query: 3 KCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIRE 58
+C D + LQI+SV+A +H+K YIY+EA K+ HVK A +G+ N+ ++Q+ +VPI+E
Sbjct: 203 QCTD--TPLQIKSVVAPEHVKGYIYVEAYKQTHVKAAIEGVGNLRMGFWNQQ--MVPIKE 258
Query: 59 MTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANK 118
MTDVL V + +L +WVR+K G YK D+A+V V+ + +++K+IPRIDL + +
Sbjct: 259 MTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEPSQNTISLKMIPRIDLDRIKAR 318
Query: 119 LEGRE-VAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYK 176
+ ++ AK+K F PP R + ++ R L V GD+ + GFL+K
Sbjct: 319 MSMKDWFAKRKKFKRPPQRLFDAEKIRSLGGEVSH-----DGDFMIFEANRYSRKGFLFK 373
Query: 177 TVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGD 236
+ +M ++ + ++PT ELEKF E + ++ + +T ++ + GD V V +G+
Sbjct: 374 SFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTETT--GKEREHNLQAGDNVEVCEGE 431
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
L NL+G + VD + I P+ + L L + EL KYF G+HVKV++G G TG++
Sbjct: 432 LINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVKVIAGRYEGDTGLI 491
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
++VE++ +I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R
Sbjct: 492 VRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGELVQLDPQTVGVIVR 551
Query: 357 VESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKG 415
+E E FQVL +V V+ + + + + + V D +N + VKD+V++++GP G
Sbjct: 552 LERETFQVLNM---HGKVLTVRHQAVNRRKDNRFAVALDSEQNNIHVKDIVKVIDGPHSG 608
Query: 416 KQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTP 475
++G + HI+RG F+H + +E+ G K+ V+ GGS+ R+ ++
Sbjct: 609 REGEIRHIFRGFAFLHCKKLVENGGMFVCKARHLVLAGGSKP---RDVTNFTVGGFAPMS 665
Query: 476 PRIPQSP--------GRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVD 527
PRI SP + GG GG RG + L+G TV++ GPYKGY G V D
Sbjct: 666 PRI-SSPMHPGGGGQPQRGGGGGGGGGMGRGRGRRDNDLIGQTVRISQGPYKGYIGVVKD 724
Query: 528 VKGQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPM 575
+ RVEL S + ++VDR ++ + + TP TP YG GS TPM
Sbjct: 725 ATESTARVELHSTCQTISVDRQRLTTVGGKERQGRSSTHLRTPMYGSQTPIYGTGSRTPM 784
Query: 576 HPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSP--PRDNWE---DGNP-- 628
+ S+TPLH TP+HDG RTP + AW+P P +P P D +E D P
Sbjct: 785 YGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPNNPNTPSRPDDEYEFAYDDEPSP 844
Query: 629 ---GSWGT----------------SPQYQPGSPPSRA---------YEAPTPGSGWASTP 660
G GT +PQY P +P + A Y AP+P + +P
Sbjct: 845 SPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYAAPSPQGSYQPSP 904
Query: 661 GGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GG 717
P ++P+ Y P TP PM AS P G PMTPG GG
Sbjct: 905 SPQSYHQVAPSPVGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGG 960
Query: 718 LDAMSPVIGADN-EGPWFMPDILVR------RSGEESVVGVIREVLPDGSCRVVLGSSGN 770
+ +P D W DI+VR G + G+IR V G C V L +
Sbjct: 961 YNPHTPGSNIDQASNDWVTTDIMVRVKDTFLDGGVINQTGIIRSVT-GGMCSVFLQDTEK 1019
Query: 771 GDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMA 830
+I++ +E V P K +K+K++ G R ATG L+ +DG DGIV++++ +KIL++
Sbjct: 1020 VVSISS--EHLEPVTPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMELDEQLKILNLR 1077
Query: 831 ILAKL 835
L KL
Sbjct: 1078 FLGKL 1082
>gi|115467008|ref|NP_001057103.1| Os06g0208300 [Oryza sativa Japonica Group]
gi|51091204|dbj|BAD35897.1| transcription factor-like [Oryza sativa Japonica Group]
gi|113595143|dbj|BAF19017.1| Os06g0208300 [Oryza sativa Japonica Group]
gi|347737117|gb|AEP20531.1| transcription factor [Oryza sativa Japonica Group]
Length = 291
Score = 411 bits (1056), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/299 (69%), Positives = 246/299 (82%), Gaps = 10/299 (3%)
Query: 541 MKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDG 600
MK+VTV R I+D V+TP+R+ PRY +G ETPMHPSRTPLHPY TPMRD GATPIHDG
Sbjct: 1 MKIVTVKRDDIADTPTVATPFRE-PRYPLGGETPMHPSRTPLHPYQTPMRDPGATPIHDG 59
Query: 601 MRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTP 660
MRTPMR R W PMSPPRDNWE+GNP +WG+SP YQPG+PP+R YEAPTPGSGWA+TP
Sbjct: 60 MRTPMR-RGW---APMSPPRDNWEEGNPATWGSSPAYQPGTPPARPYEAPTPGSGWANTP 115
Query: 661 GGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDA 720
G +Y+DA TPR+S+ Y NAPSPY+PSTP GQPMTPNSASYLPGTPGGQPMTPG G+D
Sbjct: 116 GVSYNDAPTPRESN--YGNAPSPYVPSTPVGQPMTPNSASYLPGTPGGQPMTPGNVGMDI 173
Query: 721 MSPVIGADNEGPWFMPDILVR--RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALP 778
MSP+IG + EG W +PD+LV R+G++ GV+REVL DGSCRV LGSSGNG+ +T LP
Sbjct: 174 MSPIIGGEGEGNWLLPDVLVNVLRAGDDGP-GVVREVLADGSCRVALGSSGNGEIVTVLP 232
Query: 779 NEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
E+E++ P+K+DKIKIM G RG +GKLIG+DG+DGIVK+D + +VKILDM ILAKLA
Sbjct: 233 TELEVIRPKKSDKIKIMNGNFRGYSGKLIGIDGSDGIVKLDDTYEVKILDMVILAKLAS 291
>gi|82112887|sp|Q9DDT5.1|SPT5H_DANRE RecName: Full=Transcription elongation factor SPT5; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit; AltName: Full=Protein foggy
gi|11527858|gb|AAG37030.1| transcription elongation regulator FOGGY [Danio rerio]
Length = 1084
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 301/905 (33%), Positives = 466/905 (51%), Gaps = 97/905 (10%)
Query: 3 KCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIRE 58
+C D + LQI+SV+A +H+K YIY+EA K+ HVK A +G+ N+ ++Q+ +VPI+E
Sbjct: 203 QCTD--TPLQIKSVVAPEHVKGYIYVEAYKQTHVKAAIEGVGNLRMGFWNQQ--MVPIKE 258
Query: 59 MTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANK 118
MTDVL V + +L +WVR+K G YK D+A+V V+ + +++K+IPRIDL + +
Sbjct: 259 MTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEPSQNTISLKMIPRIDLDRIKAR 318
Query: 119 LEGRE-VAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYK 176
+ ++ AK+K F PP R + ++ R L V GD+ + GFL+K
Sbjct: 319 MSMKDWFAKRKKFKRPPQRLFDAEKIRSLGGEVSH-----DGDFMIFEANRYSRKGFLFK 373
Query: 177 TVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGD 236
+ +M ++ + ++PT ELEKF E + ++ + +T ++ + GD V V +G+
Sbjct: 374 SFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTETT--GKEREHNLQAGDNVEVCEGE 431
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
L NL+G + VD + I P+ + L L + EL KYF G+HVKV++G G TG++
Sbjct: 432 LINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVKVIAGRYEGDTGLI 491
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
++VE++ +I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R
Sbjct: 492 VRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGELVQLDPQTVGVIVR 551
Query: 357 VESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKG 415
+E E FQVL +V V+ + + + + + V D +N + VKD+V++++GP G
Sbjct: 552 LERETFQVLNM---HGKVLTVRHQAVNRRKDNRFAVALDSEQNNIHVKDIVKVIDGPHSG 608
Query: 416 KQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTP 475
++G + HI+RG F+H + +E+ G K+ V+ GGS+ R+ ++
Sbjct: 609 REGEIRHIFRGFAFLHCKKLVENGGMFVCKARHLVLAGGSKP---RDVTNFTVGGFAPMS 665
Query: 476 PRIPQSP--------GRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVD 527
PRI SP + GG GG RG + L+G TV++ GPYKGY G V D
Sbjct: 666 PRI-SSPMHPGGGGQPQRGGGGGGGGGMGRGRGRRDNDLIGQTVRISQGPYKGYIGVVKD 724
Query: 528 VKGQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPM 575
+ RVEL S + ++VDR ++ + + TP TP YG GS TPM
Sbjct: 725 ATESTARVELHSTCQTISVDRQRLTTVGGKERQGRSSTHLRTPMYGSQTPIYGTGSRTPM 784
Query: 576 HPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSP--PRDNWE---DGNP-- 628
+ S+TPLH TP+HDG RTP + AW+P P +P P D +E D P
Sbjct: 785 YGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAWDPNNPNTPSRPDDEYEFAYDDEPSP 844
Query: 629 ---GSWGT----------------SPQYQPGSPPSRA---------YEAPTPGSGWASTP 660
G GT +PQY P +P + A Y AP+P + +P
Sbjct: 845 SPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTDQYSPYAAPSPQGSYQPSP 904
Query: 661 GGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GG 717
P ++P+ Y P TP PM AS P G PMTPG GG
Sbjct: 905 SPQSYHQVAPSPVGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGG 960
Query: 718 LDAMSPVIGADN-EGPWFMPDILVR------RSGEESVVGVIREVLPDGSCRVVLGSSGN 770
+ +P D W DI+VR G + G+IR V G C V L +
Sbjct: 961 YNPHTPGSNIDQASNDWVTTDIMVRVKDTFLDGGVINQTGIIRSVT-GGMCSVFLQDTEK 1019
Query: 771 GDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMA 830
+I++ +E V P K +K+K++ G R ATG L+ +DG DGIV++++ +KIL++
Sbjct: 1020 VVSISS--EHLEPVTPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMELDEQLKILNLR 1077
Query: 831 ILAKL 835
L KL
Sbjct: 1078 FLGKL 1082
>gi|321454579|gb|EFX65744.1| hypothetical protein DAPPUDRAFT_303545 [Daphnia pulex]
Length = 1099
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 304/890 (34%), Positives = 455/890 (51%), Gaps = 92/890 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+S+++ + +K YIY+EA K+ HVK+A G+ ++ YSQ+ +VPI+EMTDVL V
Sbjct: 234 LQIKSIVSPEGVKGYIYVEAFKQTHVKQAIDGIGSLRMGLYSQQ--MVPIKEMTDVLRVV 291
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ----ALANKLEGR 122
+ + +WVR+K G +K D+A+V VD + +V +KLIPRID AL
Sbjct: 292 KEQSVMKPKSWVRLKRGIFKDDIAQVDYVDVAQNQVHLKLIPRIDYSRPRGALRTAQSDA 351
Query: 123 EVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKS 182
E KK+ PP + +++ R + V GD+ G + GFLYK SM +
Sbjct: 352 EAKKKRKIRPPLKLFDLEAIRAVGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFSMTA 406
Query: 183 ISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKG 242
I A ++PT ELE+F E D+A +F GDAV V +G+L +L+G
Sbjct: 407 ILADGVKPTLIELERFEEAVEG--VDMAVRIVSGKEEATHNFATGDAVEVCEGELIHLRG 464
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + + P + L L + EL KYF G+HV+V++G TG++++VE +
Sbjct: 465 KIVAIDGNKITVMPRHEDLKDPLEFQAHELKKYFSMGDHVRVIAGRYENDTGLIVRVEDN 524
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++ SD T +++V D+ S++ TG+ +G Y+ DLV LD S GVI+R+E E F
Sbjct: 525 MVVLFSDLTMHELKVLPRDLQLCSDMATGVDSMGQYQWGDLVQLDAQSVGVIVRLERENF 584
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
QVL K V RP+ AL + +E +++ D +NT+ KD+V++++GP G+QG
Sbjct: 585 QVLNMHGKVVAVRPQ-ALQRRKE-----NRQAVALDSEQNTIQRKDIVKVIDGPHSGRQG 638
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN------GDAYSRFNSL 472
+ H+YR F+H R LE+ G K+ V+ GGS+ + G R +S
Sbjct: 639 EIRHLYRNFAFLHSRMMLENGGIFVCKTRHLVLAGGSKGAASGSPAVSSLGYMSPRISSP 698
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQS 532
P G GG GR D L+G T+KV GPYKG+ G V D +
Sbjct: 699 MHPSGGGGGGGGGRGGGGGGFGRGGRIGRDRD-LIGKTIKVTQGPYKGHIGIVKDATDST 757
Query: 533 VRVELESQMKVVTVDRSMI------SDNVVVSTPY---------RDTPRYGMGSETPMHP 577
RVEL S+ + V+VDR+ I S + VST RDTP Y GS TPM+
Sbjct: 758 ARVELHSKCQTVSVDRTRIAVVGGPSKSGAVSTYSQTPASQAEGRDTPMYASGSRTPMYG 817
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR-------DNWEDGNPGS 630
S+TPL+ G TP HDG RTP + AW+P +P R DNW+D +P
Sbjct: 818 SQTPLYDGSRTPHYGGMTPSHDGSRTPGQSGAWDPTVTNTPARSTDYGDLDNWDDQSP-- 875
Query: 631 WGTSPQYQPGSPPSRAYEAPTPGSGWA-STPGGNYSDAGT-----PRDSSSTYVNAPSPY 684
SP Y P +P S AY TP + TPG +Y T P S + Y +PSP
Sbjct: 876 ---SPAYNPATPGS-AYHVDTPQGPYTPHTPGTSYGSDHTYSPYQPSPSPAPYQASPSPS 931
Query: 685 ----LPSTPGGQPMTPN---SASYLPGTP-GGQPMTPGTG--GLDAMSPVIGAD--NEGP 732
PS G P P+ ++SY +P PMTPG L+ +P G D +
Sbjct: 932 GYAPTPSPSTGLPFHPSPGMASSYTSPSPMSYSPMTPGVAPSPLNPQTPGAGMDSLSSQD 991
Query: 733 WFMPDILVR------RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNE-IEIVP 785
W+ DI VR +G G+IR + G C + L + D + + E +E +
Sbjct: 992 WYTTDIEVRFKDSHSDAGLSGQSGIIRGI-SGGMCSLFLPAE---DRVVTVAGELLEPIV 1047
Query: 786 PRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
P + D++KI+ G R + G+L+ +D +G+VK++ S DV++ + L K+
Sbjct: 1048 PSRRDRVKIILGEERESCGQLLSIDHQEGVVKLE-SGDVRMFQLRYLCKM 1096
>gi|255072175|ref|XP_002499762.1| transcription elongation-nucleosome displacement protein [Micromonas
sp. RCC299]
gi|226515024|gb|ACO61020.1| transcription elongation-nucleosome displacement protein [Micromonas
sp. RCC299]
Length = 1081
Score = 409 bits (1052), Expect = e-111, Method: Compositional matrix adjust.
Identities = 300/883 (33%), Positives = 450/883 (50%), Gaps = 111/883 (12%)
Query: 1 MQKCID-----KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK-VMLV 54
MQK I+ KGS + I+S DHLK+YIY+EA++E+ VK+A +G+R++Y K + LV
Sbjct: 259 MQKAINLHKSGKGS-MAIKSACVQDHLKSYIYVEAERESDVKKALQGMRHVYHSKPIKLV 317
Query: 55 PIREMTDVLAVESKAID-LSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
PI EM D + V K ++ + +WVRM+ G YKGDLA+V+D++ + TV+L+PR D
Sbjct: 318 PITEMVDSITVTKKKVENIQYQSWVRMRGGVYKGDLARVIDINYADNQCTVQLVPRFDYA 377
Query: 114 ALANKLEGREVAKKKP---FVPPPRFMNVDEARELHIRVER-RRDPMTGDYFENIGGML- 168
L K EG + KP PP R EAR+ ++ +ER R D TGD + + G+
Sbjct: 378 LLQAKEEGTAAGRAKPNAALRPPARLFTEAEARKYNLSLERGRMDRRTGDRLDILCGVHK 437
Query: 169 FKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENG---------------ESDIASLS 213
+DG+ KT+SM S +P DEL+++ T GE+ E+++ +L+
Sbjct: 438 LRDGYYIKTISMASCKLAG-EPPLDELQRY-TAGEDAAGEDRGEVGAGKSTTEANLEALA 495
Query: 214 TLFANRKKGH---FMKGDAVIVIKGDLKNLKGWVEKVDEE-NVHIRPEMKGLPKTLAVNS 269
+R F GD V+V+KGDLKNL G V++V + V I+PE + L L V+
Sbjct: 496 ASLGDRSASADQVFRPGDQVVVVKGDLKNLTGIVDRVMADGTVQIKPEHELLHDILDVDR 555
Query: 270 KELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVT 329
+ L K F+ G+HV+ + G G G+V+KVE V + SD TKE+ VF+ + +S+E T
Sbjct: 556 ENLRKSFKIGSHVRCIEGRHEGEAGLVVKVEGEVATVFSDVTKEEFLVFSHHLADSAETT 615
Query: 330 TGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVP--DRPEVALVKLREIKCKLE 387
+ +G+Y + DL LL ++S G++IRVE +A ++ DRP+V V+L + + KL
Sbjct: 616 HRVETLGEYGVHDLALLKDDSVGMLIRVEKDAAMLMMSTSNFDRPDVRAVRLHDFQRKLY 675
Query: 388 KKS-NVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKS 446
++ + D T+ K + RIV+GP KG VEHI++G+L+ R EH G + +S
Sbjct: 676 TRTLSAVDSAMETIEPKSMCRIVDGPGKGMTITVEHIWKGVLWGKARGVSEHGGMLVCRS 735
Query: 447 SSCVVVGGSRANGDRNGDAYSRFNSLRTPP--RIPQSPGRYSRGGPPAG---GRNRGGR- 500
+ GG + G F ++ P + +SP GGP A GR GG
Sbjct: 736 RDVKIHGGRAKDPVTGGRG---FGAVPMSPGSALLRSPSNQDNGGPQAAPQRGRFGGGAV 792
Query: 501 GGHDA-LVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISD--NVVV 557
G DA L+G+ VKV G YKGY+G+VVD +VRVEL++Q + VTV R+ I+ V
Sbjct: 793 GRRDAGLIGSNVKVTAGVYKGYKGKVVDATETTVRVELQAQGRTVTVQRTQIAQPGAAPV 852
Query: 558 STPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHD---GMRTPMRDRAWNPYT 614
++ Y P ++ P+RTP H TP + G TP D G RTP+RD AW T
Sbjct: 853 ASSYGAAPSVASSVDSFQPPARTPQHRPTTPAYNPGMTPSRDDGAGGRTPLRDTAWGAQT 912
Query: 615 PMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSS 674
P + +W D P TPGG GTP
Sbjct: 913 P-AYDTSHWNDDTP------------------------------TPGGESGYTGTP---- 937
Query: 675 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWF 734
+ P GG +SA + + G TG + + P
Sbjct: 938 ----DVRHTGTPDLRGG-----SSALAISASDAGYRGKFITGAVVVL----------PGG 978
Query: 735 MPDILVRRSGEESVVGV-IREVLPDGSCRVVLGSSGNGDTI-TALPNEIEIVPPRKTDKI 792
++ RSG+E V + + LP+G R+ S GD T E+E+ P+K DKI
Sbjct: 979 KQGVVRSRSGDEVTVQIGTLKTLPNGETRM---ESLEGDERETVSEAELELAKPQKKDKI 1035
Query: 793 KIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
++ G RG +LIGVD DG++K+D + ++ I + LA++
Sbjct: 1036 IVVEGTDRGLGAELIGVDNEDGVIKMDATKEISIYGIGTLARI 1078
>gi|348563026|ref|XP_003467309.1| PREDICTED: transcription elongation factor SPT5-like isoform 1 [Cavia
porcellus]
Length = 1087
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 296/901 (32%), Positives = 468/901 (51%), Gaps = 98/901 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP ++G + HI
Sbjct: 561 LNMY---GKVVTVRHQAVTQKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSDREGEIRHI 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRI--PQS 481
YR F+H + +E+ G K+ V+ GG + R+ ++ PRI P
Sbjct: 618 YRNFAFLHCKKLVENGGMFVCKTRHLVLAGGLKP---RDVTNFTVGGFAPMSPRISSPMH 674
Query: 482 PGRYSRGGPPAGGRNRGGRGGH------DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRV 535
P + G GG + L+G TV++ GPYKGY G V D + RV
Sbjct: 675 PSGGGQHGGFGSPGGSGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARV 734
Query: 536 ELESQMKVVTVDRSMISDNVV-----VSTPYRDTPRYGMGSETPMH--PSRTPLHPYMTP 588
EL S + ++VDR ++ +++ Y TP Y GS+TPM+ SRTP++ TP
Sbjct: 735 ELHSTCQTISVDRQRLTTVGSRRPGGMTSNYGRTPMY--GSQTPMYGSGSRTPMYGSQTP 792
Query: 589 MRD-------AGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG 632
++D TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 793 LQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYG 852
Query: 633 -----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSD 666
+PQY P +P + A Y AP+P + +P
Sbjct: 853 GTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYH 912
Query: 667 AGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSP 723
P + ++P+ Y P TP PM AS P G PMTPG GG + +P
Sbjct: 913 QVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTP 968
Query: 724 VIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITA 776
G + N W DI V+ + VV G+IR V G C V L S +I++
Sbjct: 969 GSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGIIRSVT-GGMCSVYLKDSEKVVSISS 1027
Query: 777 LPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLA 836
+E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL
Sbjct: 1028 --EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLL 1085
Query: 837 Q 837
+
Sbjct: 1086 E 1086
>gi|410926453|ref|XP_003976693.1| PREDICTED: transcription elongation factor SPT5-like [Takifugu
rubripes]
Length = 1082
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 300/895 (33%), Positives = 458/895 (51%), Gaps = 96/895 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A DH+K YIY+EA K+ HVK A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 212 LQIKSVVAPDHVKGYIYVEAYKQTHVKSAIEGIGNLRMGLWNQQ--MVPIKEMTDVLKVV 269
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRIDL + K+ ++ A
Sbjct: 270 KEVTNLKPKSWVRLKRGLYKDDIAQVDYVEPSQNTISLKMIPRIDLDRIKAKMSLKDWFA 329
Query: 126 KKKPFVPP-PRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F P R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 330 KRKKFKRPGQRLFDAEKIRSLGGEVSH-----DGDFMIFEGNRYSRKGFLFKSFAMSAVI 384
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
++PT ELEKF E + ++ + S ++ + GD V V +G+L NL+G +
Sbjct: 385 TDGVKPTLSELEKFEDQPEGLDLEVVTES---GKEREHNLQAGDNVEVCEGELINLQGKI 441
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L + EL KYF G+HVKV++G G TG++++VE++ +
Sbjct: 442 LSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVKVIAGRYEGDTGLIVRVEENFV 501
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 502 ILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGELVQLDPQTVGVIVRLERETFQV 561
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + + + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 562 LNM---HGKVLTVRHQAVNRRKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 618
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+RG F+H + +E+ G K+ V+ GGS+ R+ ++ PRI SP
Sbjct: 619 FRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKP---RDVTNFTVGGFAPMSPRI-SSPM 674
Query: 484 RYSRGGPPAGGRNRGGRGGH------DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVEL 537
+ GG P G GG + L+G TV++ GPYKGY G V D + RVEL
Sbjct: 675 HHGGGGAPQRGGGGGGGMWRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVEL 734
Query: 538 ESQMKVVTVDRS------------MISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPY 585
S + ++VDR M S + TP YG GS TPM+ S+TPLH
Sbjct: 735 HSTCQTISVDRQRLTTMGAKRHSGMTSAHSRTPMYGSQTPMYGTGSRTPMYGSQTPLHDG 794
Query: 586 MTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWE-----DGNP-----GSWGT-- 633
TP+HDG RTP + AW+P P +P R+ E D P G GT
Sbjct: 795 SRTPHYGSQTPLHDGSRTPGQSGAWDPSNPNTPSRNEEEYDFGYDDEPSPSPQGYGGTPN 854
Query: 634 --------------SPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTP 670
+PQY P +P + A Y AP+P + +P P
Sbjct: 855 PQTPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYAAPSPQGSYQPSPSPQSYHQVAP 914
Query: 671 RDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGA 727
++P+ Y P TP PM AS P G PMTPG GG + +P G+
Sbjct: 915 SPVGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTP--GS 968
Query: 728 DNE---GPWFMPDILVRRSGE----ESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNE 780
+ E W DILVR GVIR V G C V + S +I++ +
Sbjct: 969 NIEQGSSDWVTTDILVRVKDSFMDLMGQTGVIRSVT-GGMCSVFMQESEKVVSISS--DH 1025
Query: 781 IEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+E V P K +K+K++ G R ATG L+ +DG DGIV++++ +KIL++ L +L
Sbjct: 1026 LEPVTPTKNNKVKVIMGEDREATGILLSIDGDDGIVRMELDDQLKILNLRFLGRL 1080
>gi|348563028|ref|XP_003467310.1| PREDICTED: transcription elongation factor SPT5-like isoform 2 [Cavia
porcellus]
Length = 1083
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 296/901 (32%), Positives = 468/901 (51%), Gaps = 98/901 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 497 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPRTVGVIVRLERETFQV 556
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP ++G + HI
Sbjct: 557 LNMY---GKVVTVRHQAVTQKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSDREGEIRHI 613
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRI--PQS 481
YR F+H + +E+ G K+ V+ GG + R+ ++ PRI P
Sbjct: 614 YRNFAFLHCKKLVENGGMFVCKTRHLVLAGGLKP---RDVTNFTVGGFAPMSPRISSPMH 670
Query: 482 PGRYSRGGPPAGGRNRGGRGGH------DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRV 535
P + G GG + L+G TV++ GPYKGY G V D + RV
Sbjct: 671 PSGGGQHGGFGSPGGSGGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARV 730
Query: 536 ELESQMKVVTVDRSMISDNVV-----VSTPYRDTPRYGMGSETPMH--PSRTPLHPYMTP 588
EL S + ++VDR ++ +++ Y TP Y GS+TPM+ SRTP++ TP
Sbjct: 731 ELHSTCQTISVDRQRLTTVGSRRPGGMTSNYGRTPMY--GSQTPMYGSGSRTPMYGSQTP 788
Query: 589 MRD-------AGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG 632
++D TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 789 LQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYG 848
Query: 633 -----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSD 666
+PQY P +P + A Y AP+P + +P
Sbjct: 849 GTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYH 908
Query: 667 AGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSP 723
P + ++P+ Y P TP PM AS P G PMTPG GG + +P
Sbjct: 909 QVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTP 964
Query: 724 VIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITA 776
G + N W DI V+ + VV G+IR V G C V L S +I++
Sbjct: 965 GSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGIIRSVT-GGMCSVYLKDSEKVVSISS 1023
Query: 777 LPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLA 836
+E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL
Sbjct: 1024 --EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLL 1081
Query: 837 Q 837
+
Sbjct: 1082 E 1082
>gi|427788525|gb|JAA59714.1| Putative rna polymerase ii transcription elongation factor
dsif/supt5h/spt5 [Rhipicephalus pulchellus]
Length = 1087
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 298/882 (33%), Positives = 461/882 (52%), Gaps = 92/882 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQIRSV+A + +K Y+YIEA K HVK+ +G+ N+ Y Q M+VPI+EMTDVL V
Sbjct: 242 LQIRSVVAPEGVKGYVYIEAYKHTHVKQCIQGIGNLRIGLYQQ--MMVPIKEMTDVLRVT 299
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID-------LQALANKL 119
+ L WVR+K G Y+ DLA+V VD + +V +KL+PR+D L++ +N+
Sbjct: 300 REQAQLRPKQWVRLKRGIYRDDLAQVDYVDTAQGQVNLKLLPRVDYTRPRGALRSASNEP 359
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
E R+ +K+ P + +VD R + V GD+ G + GFLYK +
Sbjct: 360 EKRKKSKR----PAAKLFDVDAIRAVGGEVT-----TDGDFLIFEGNRYSRKGFLYKAFA 410
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLK 238
+I A ++PT ELEKF E E ++ ++GH F GD V V +G+L
Sbjct: 411 TSAIIADGVKPTLSELEKFEEQPEGLELELGETR----KEEQGHSFAPGDNVEVAEGELV 466
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
+L+G + +D + + P+ + L L + EL KYF+ G+HVKV++G G TG++++
Sbjct: 467 HLQGKIISIDGNKITMLPKHEDLTDPLDFQAHELKKYFKMGDHVKVIAGRFEGDTGLIVR 526
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
VE +++++ SD T +++V D+ +++ TG+ +G ++ DLV LD + GVI+R+E
Sbjct: 527 VEDNMVVLFSDLTMHELKVLPRDLQLCADMATGVDSLGQFQWGDLVQLDPQTVGVIVRLE 586
Query: 359 SEAFQVLKGVPDRPEVALVKLREIKCKLE-KKSNVQDRNKNTVAVKDVVRIVEGPCKGKQ 417
E FQVL ++ VK + + K + +K+ D ++N + V+D+V++++GP G+Q
Sbjct: 587 KENFQVLNM---HGKLVQVKHQSVTKKCDARKAVALDSDQNQIQVRDIVKVIDGPHSGRQ 643
Query: 418 GPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPR 477
G V+HI+R F+H R LE+ G K+ ++ G +R + G A + L PR
Sbjct: 644 GDVKHIFRNFAFLHSRMMLENGGIFVCKTRHLLLAGSTRQS---TGPAMGGYTPLS--PR 698
Query: 478 I--PQSPGRYSRGGPPAGGRNRGGRGGH-----DALVGTTVKVRLGPYKGYRGRVVDVKG 530
I P P GG GG GG G L+G T+K+ GPYKG+ G V D
Sbjct: 699 ISSPMHPSGGGGGGGRGGGFGGGGGRGRGGRRDSELIGQTIKITQGPYKGHIGIVKDATE 758
Query: 531 QSVRVELESQMKVVTVDRSMIS-------DNVVVSTPYRDTPRYGMGSETPMHP--SRTP 581
+ RVEL ++ + ++VDR+ IS + Y TP YG GS+TPM+ SRTP
Sbjct: 759 TTARVELHTKCQTISVDRTRISVVGSASKGGSGGVSTYNRTPMYGSGSQTPMYQSGSRTP 818
Query: 582 LHPYMTPMRDAGA---------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWG 632
++ TP+ +AG+ TP+HDG RTP+ AW+P +P R +D
Sbjct: 819 MYGSQTPLYEAGSRTPHFGGGQTPLHDGSRTPVHG-AWDPTASNTPARTELDDYTLDEGS 877
Query: 633 TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPS-TPGG 691
SP YQP +P +A E P G TPG SD +Y +P+ Y PS +P G
Sbjct: 878 PSPSYQPATPGYQAPETPQ-GPYTPQTPGMYGSD--------HSYSPSPTAYQPSPSPTG 928
Query: 692 QPMTPNSASYLPGTP------GGQPMTPGT-GGLDAMSPVIGADNEG-PWFMPDILVR-- 741
TP+ ++ GTP G P TPG + +P G + W D+ VR
Sbjct: 929 YVTTPSPVTFQAGTPSPSTYGGYSPTTPGAPSPFNPQTPGAGMEQLSVEWQSVDLEVRIK 988
Query: 742 --RSGEESV--VGVIREVLPDGSCRVVLGSSGNGDTITALPNE-IEIVPPR-KTDKIKIM 795
GE + GVIR + G C V L D + ++P+E +E VPP + DK+K++
Sbjct: 989 DTHEGEGLIGQTGVIRGI-SGGMCSVFLLKE---DRVVSIPSEHLEPVPPTLRGDKVKVL 1044
Query: 796 GGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
G R TG+L+ +D +G+VK+ S + + + K+ +
Sbjct: 1045 MGEDREETGELLSIDMREGVVKIFSSGKITMQPLRHFCKMHE 1086
>gi|307213971|gb|EFN89194.1| Transcription elongation factor SPT5 [Harpegnathos saltator]
Length = 1053
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 307/887 (34%), Positives = 453/887 (51%), Gaps = 83/887 (9%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAV 65
G LQI+S++A + +K YIYIEA K+AHVK A + + ++ K +VPI+EMTDVL V
Sbjct: 186 GEPLQIKSIVAPEGVKGYIYIEAFKQAHVKAAIESVGSLRMGIWKQQMVPIKEMTDVLRV 245
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----E 120
+ L WVR+K G YK D+A+V VD + +V +KL+PRID L E
Sbjct: 246 VKEQTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSE 305
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
+ +KK PP + + + R + V GD+ G + GFLYK +
Sbjct: 306 SEALKRKKKRRPPAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTT 360
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-----FMKGDAVIVIKG 235
+I A+ ++PT ELE+F E E D++ + K+ F GD V V +G
Sbjct: 361 SAIIAEGVKPTLSELERFEEAPEGVEIDLSGTPGTGVSGKEDQAVTHSFSNGDNVEVCEG 420
Query: 236 DLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
+L NL+G + +D + + P+ + L + L + EL KYF G+HVKVV+G G TG+
Sbjct: 421 ELINLQGKIVSIDGNMIMVMPKHEELKEALEFQASELRKYFTMGDHVKVVAGRYEGDTGL 480
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
+++VEQ+ +++ SD + ++ V D+ S++ TG+ +G ++ DLV LD + GVI+
Sbjct: 481 IVRVEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIV 540
Query: 356 RVESEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEG 411
R+E E F VL K V RP+ L K RE + + D +NT+ KD+V++V+G
Sbjct: 541 RLERENFHVLSMHGKVVEARPQ-GLTKRRE-----NRNAVALDSQQNTIQKKDIVKVVDG 594
Query: 412 PCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNS 471
P G+ G ++H+YR F+H R +++ G K+ + GG++ N A + F S
Sbjct: 595 PHAGRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGTKTNAT-TMSAVAGFMS 653
Query: 472 LR-TPPRIPQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVK 529
R P P G GG GR RGG D L+GTT+K+ GPYKG G V D
Sbjct: 654 PRIASPMHPSGGGFGRGGGGAGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGIVKDAT 713
Query: 530 GQSVRVELESQMKVVTVDRSMISDNVVVS-----TPYRDTPRYGMGSETPMHP---SRTP 581
+ RVEL S + ++VDRS I++ V S + Y TP Y G +TPM+ S+TP
Sbjct: 714 ETTARVELHSTCQTISVDRSHIANVGVPSKDGGFSSYNRTPAYTAGGQTPMYARDGSKTP 773
Query: 582 LHPYMTPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGT 633
+H TPM + G+ TP HDG RTP + AW+P +P R N DG G
Sbjct: 774 MHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPTVTNTPARTNDFDGYSMEEGG 833
Query: 634 SPQYQPGSPPSRAYEAP-TPGSGWAS-------TPGGNYSDAGTPRDSSSTYVNAPSPY- 684
SP Y PG PP+ P TPG+ + S P + + + T S + YV PSP
Sbjct: 834 SPGYAPGYPPTGGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPTGYVATPSPSG 893
Query: 685 --LPSTPGGQPMTPNSASYLPGTPGG--QPMTPGTGGLDA--MSPVIGADNEGPWFMPDI 738
++P G TP+ Y P TPG P TPG GLD S IG W DI
Sbjct: 894 TGYTTSPHGAFATPSPMGYSPMTPGSPYNPQTPG-AGLDTGVGSSTIGGSE---WHTTDI 949
Query: 739 LVR---------RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNE-IEIVPPRK 788
VR +G+++V+ I G C V L + D + L E +E V P +
Sbjct: 950 EVRIRDSHDDPALAGQQAVIRGIS----GGMCTVYLPTE---DRVVNLGCEQLEPVVPSR 1002
Query: 789 TDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
D++K++ G R A G L+ +D +G+VK++ ++K L + L K+
Sbjct: 1003 GDRVKVILGEDREAVGTLLSIDNQEGVVKLNTE-EIKFLQLRFLCKM 1048
>gi|380016438|ref|XP_003692192.1| PREDICTED: transcription elongation factor SPT5-like isoform 1 [Apis
florea]
Length = 1135
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 304/884 (34%), Positives = 452/884 (51%), Gaps = 75/884 (8%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+SV+A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V +
Sbjct: 269 LQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKE 328
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V VD + +V +KL+PRID L E
Sbjct: 329 QTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSESEA 388
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+ +KK P + + + R + V GD+ G + GFLYK + +I
Sbjct: 389 LKRKKKRRPAAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTTSAI 443
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKK------GHFMKGDAVIVIKGDL 237
A+ ++PT ELE+F E E D++ A+ K F GD V V +G+L
Sbjct: 444 IAEGVKPTLSELERFEEAPEGVELDLSGAPGTGASGNKEDSAVTHSFSTGDNVEVCEGEL 503
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVL 297
NL+G + +D + + P+ + L + L + EL KYF G+HVKVV+G G TG+++
Sbjct: 504 INLQGKIVSIDGNMIMVMPKHEELKEALEFQASELRKYFTMGDHVKVVAGRYEGDTGLIV 563
Query: 298 KVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRV 357
+VEQ+ +++ SD + ++ V D+ S++ TG+ +G ++ DLV LD + GVI+R+
Sbjct: 564 RVEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIVRL 623
Query: 358 ESEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPC 413
E E F VL K + RP+ L K RE + + D +NT+ KD+V++V+GP
Sbjct: 624 ERENFHVLSMHGKVIEARPQ-GLTKRRE-----NRNAVALDSQQNTIQKKDIVKVVDGPH 677
Query: 414 KGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLR 473
G+ G ++H+YR F+H R +++ G K+ + GG+++N + + F S R
Sbjct: 678 AGRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKSN-ISSMSPMTGFMSPR 736
Query: 474 TPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSV 533
+ S G + RGG G GG L+GTT+K+ GPYKG G V D +
Sbjct: 737 IASPMHPSGGGFGRGGGGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGIVKDAIDTTA 796
Query: 534 RVELESQMKVVTVDRSMISDNVVVS-----TPYRDTPRYGMGSETPMHP---SRTPLHPY 585
RVEL S + ++VDRS I++ V++ + Y TP YG G +TPM+ S+TP+H
Sbjct: 797 RVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYG-GGQTPMYARDGSKTPMHGS 855
Query: 586 MTPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY 637
TPM + G+ TP HDG RTP + AW+P +P R N DG G SP Y
Sbjct: 856 QTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGGSPGY 915
Query: 638 QPGSPPSRAYEAP-TPGSGWAS-------TPGGNYSDAGTPRDSSSTYVNAPSPY---LP 686
PG PP+ P TPG+ + S P + + + T S + YV PSP
Sbjct: 916 APGYPPTGGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPAGYVATPSPSGTGYT 975
Query: 687 STPGGQPMTPNSASYLPGTPG--GQPMTPGT--GGLDA--MSPVIGADNEGPWFMPDILV 740
++P G TP+ Y P TPG G P P T GLD + VIG W DI V
Sbjct: 976 TSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGAGLDTGVGAGVIGGTE---WHTTDIEV 1032
Query: 741 R-RSGEESVV-----GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKI 794
R R + GVIR + G C V L + + E+E V P + D++K+
Sbjct: 1033 RIRDSHQDPALAGQQGVIRGISVSGMCAVFLPVEDR--VVNLVCEELEPVVPSRGDRVKV 1090
Query: 795 MGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQP 838
+ G R A G L+ +D +G+VK++ +VK+L + L K+ P
Sbjct: 1091 IIGEDREAVGTLLSIDNQEGVVKLNKD-EVKMLHLRFLCKMKAP 1133
>gi|383859710|ref|XP_003705335.1| PREDICTED: transcription elongation factor SPT5-like [Megachile
rotundata]
Length = 1135
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 305/880 (34%), Positives = 448/880 (50%), Gaps = 73/880 (8%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+SV+A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V +
Sbjct: 269 LQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKE 328
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V VD + +V +KL+PRID L E
Sbjct: 329 QTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSESEA 388
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+ +KK PP + + + R + V GD+ G + GFLYK + +I
Sbjct: 389 LKRKKKRRPPAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTTSAI 443
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKK------GHFMKGDAVIVIKGDL 237
A+ ++PT ELE+F E E DI K F GD V V +G+L
Sbjct: 444 IAEGVKPTLSELERFEEAPEGVELDITGGPGTGGAGNKEDMAVTHSFSTGDNVEVCEGEL 503
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVL 297
NL+G + +D + + P+ + L + L + EL KYF G+HVKVV+G G TG+++
Sbjct: 504 INLQGKIVSIDGNMIMVMPKHEELKEALEFQASELRKYFTMGDHVKVVAGRYEGDTGLIV 563
Query: 298 KVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRV 357
+VEQ+ +++ SD + ++ V D+ S++ TG+ +G ++ DLV LD + GVI+R+
Sbjct: 564 RVEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIVRL 623
Query: 358 ESEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPC 413
E E F VL K + RP+ L K RE + + D +NT+ KD+V++V+GP
Sbjct: 624 ERENFHVLSMHGKVIEARPQ-GLTKRRE-----NRNAVALDSQQNTIQKKDIVKVVDGPH 677
Query: 414 KGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLR 473
G+ G ++H+YR F+H R +++ G K+ + GG+++N +
Sbjct: 678 AGRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKSNISSMSPVAGFMSPRI 737
Query: 474 TPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSV 533
T P P S G + RGG G GG L+GTT+K+ GPYKG G V D +
Sbjct: 738 TSPMHP-SGGGFGRGGGGRGRGRGGGVRRDRELIGTTIKITGGPYKGNVGIVKDATETTA 796
Query: 534 RVELESQMKVVTVDRSMISDNVVVST------PYRDTPRYGMGSETPMHP---SRTPLHP 584
RVEL S + ++VDRS I+ NV V T Y TP YG+G +TPM+ S+TP+H
Sbjct: 797 RVELHSTCQTISVDRSHIA-NVGVPTKDGGFSSYNRTPAYGVGGQTPMYARDGSKTPMHG 855
Query: 585 YMTPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQ 636
TPM + G+ TP HDG RTP + AW+P +P R N DG G SP
Sbjct: 856 SQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGGSPG 915
Query: 637 YQPGSPPSRAYEAP-TPGSGWAS-------TPGGNYSDAGTPRDSSSTYVNAPSPY---L 685
Y PG PP+ P TPG+ + S P + + + T S + YV PSP
Sbjct: 916 YAPGYPPTGGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPAGYVATPSPSGTGY 975
Query: 686 PSTPGGQPMTPNSASYLPGTPG--GQPMTPGTGGLDAMSPVIGADNEG--PWFMPDILV- 740
++P G TP+ Y P TPG G P P T G + +GA G W DI V
Sbjct: 976 TTSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGA-GLDTGVGAGIVGGTEWHTTDIEVR 1034
Query: 741 -RRSGEESVV----GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIM 795
R S ++ + GVIR + G C V L + + E+E V P + D++K++
Sbjct: 1035 IRDSHQDPALAGQQGVIRGI-SGGMCAVFLPVEDR--VVNLVCEELEPVVPSRGDRVKVI 1091
Query: 796 GGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
G R A G L+ +D +G+VK++ +VK+L + L K+
Sbjct: 1092 IGEDREAVGTLLSIDNQEGVVKLNKD-EVKMLHLRFLCKM 1130
>gi|148237645|ref|NP_001089092.1| suppressor of Ty 5 homolog [Xenopus laevis]
gi|120537396|gb|AAI29067.1| LOC733281 protein [Xenopus laevis]
Length = 1083
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 298/893 (33%), Positives = 468/893 (52%), Gaps = 86/893 (9%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLA 64
S LQI+SV++ +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL
Sbjct: 209 SPLQIKSVVSPEHVKGYIYVEAYKQTHVKQAIEGIGNLRMGFWNQQ--MVPIKEMTDVLK 266
Query: 65 VESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE- 123
V + +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++
Sbjct: 267 VVKEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDW 326
Query: 124 VAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKS 182
AK+K F PP + N ++ R L V GD+ + GFL+K+ +M +
Sbjct: 327 FAKRKKFRRPPQKHFNAEKIRSLGGDVSS-----DGDFLIFEANRYSRKGFLFKSFAMSA 381
Query: 183 ISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMK-GDAVIVIKGDLKNLK 241
+ + ++PT ELEKF E + ++ + +T +++ H ++ GD V V +G+L NL+
Sbjct: 382 VITEGVKPTLSELEKFEDQPEGVDLEVVTETT---GKEREHSLQPGDNVEVCEGELINLQ 438
Query: 242 GWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQ 301
G V VD + I P+ + L L ++EL KYF G+HVKV++G G TG++++VE+
Sbjct: 439 GKVLSVDGNKITIMPKHEDLKDLLEFPAQELRKYFRMGDHVKVIAGRYEGDTGLIVRVEE 498
Query: 302 HVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEA 361
+ +I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E
Sbjct: 499 NFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTMGVIVRLERET 558
Query: 362 FQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPV 420
FQVL +V V+ + + K + + V D N + VKD+V++++GP G++G +
Sbjct: 559 FQVLNM---HGKVVTVRHQAVNRKKDNRFAVALDSEDNNIHVKDIVKVIDGPHSGREGEI 615
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYSRFNSLRTPPRI 478
H++R F+H + +E+ G K+ V+ GGS+ N ++ + + P
Sbjct: 616 RHLFRNYAFLHCKKLVENGGMFVCKTRYLVLAGGSKPRDVTNFTVGGFAPMSPRISSPMH 675
Query: 479 PQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELE 538
P G GG GR +D L+G TV++ GPYKGY G V D + RVEL
Sbjct: 676 PSGGGPRGGGGGGGAAGRGRGRRDND-LIGQTVRISQGPYKGYIGVVKDATESTARVELH 734
Query: 539 SQMKVVTVDRS------------MISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYM 586
S + ++VDR M S +V TP YG GS TPM+ S+TPLH
Sbjct: 735 STCQTISVDRQRLTTVGARRSGGMTSTHVRTPIYGSQTPMYGTGSRTPMYGSQTPLHDGS 794
Query: 587 TPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWGTSPQY 637
TP+HDG RTP + AW+P P +P R D+ +P +G +P
Sbjct: 795 RTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEEYDYRYDDEPSPSPQGYGGTPNP 854
Query: 638 Q-PGSP--PSRAYEAP----TPGS-----------GWASTPGGNYSDAGTPRDSSSTYVN 679
Q PG P PS AP TPG+ A +P G+Y + +P+ S +
Sbjct: 855 QTPGYPDVPSPQVNAPYHPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQ---SYHQV 911
Query: 680 APSP--YLPS-TPGGQPMTPNSASYL----PGTPGGQPMTPGT---GGLDAMSPVIGADN 729
APSP Y + +P TP+ +Y P G PMTPG GG + +P +
Sbjct: 912 APSPVGYQNTHSPASYHPTPSPMAYQASPSPSPMGYSPMTPGAPSPGGYNPHTPGSSIEQ 971
Query: 730 -EGPWFMPDIL--VRRSGEESVV----GVIREVLPDGSCRVVLGSSGNGDTITALPNEIE 782
W DI VR + ++S V G++R V G C V+L S +I+ + +E
Sbjct: 972 ISSDWVTTDIQVKVRDTFQDSQVIGQTGIVRSVT-GGLCSVLLQDSEKVISISG--DHLE 1028
Query: 783 IVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
V P K ++K++ G R ATG L+ +D DGIV++D+ +KIL++ L KL
Sbjct: 1029 PVTPTKNSRVKVILGEDREATGVLLSIDNEDGIVRMDLEEQLKILNLHFLGKL 1081
>gi|194332615|ref|NP_001123796.1| suppressor of Ty 5 homolog [Xenopus (Silurana) tropicalis]
gi|189442281|gb|AAI67588.1| supt5h protein [Xenopus (Silurana) tropicalis]
Length = 1078
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 302/896 (33%), Positives = 472/896 (52%), Gaps = 93/896 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 203 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGIGNLRMGFWNQQ--MVPIKEMTDVLKVV 260
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 261 KEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 320
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP + N ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 321 KRKKFRRPPQKHFNAEKIRSLGGDVSS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 375
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMK-GDAVIVIKGDLKNLKGW 243
+ ++PT ELEKF E + ++ + +T +++ H ++ GD V V +G+L NL+G
Sbjct: 376 TEGVKPTLSELEKFEDQPEGVDLEVVTEAT---GKEREHSLQPGDNVEVCEGELINLQGK 432
Query: 244 VEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHV 303
+ VD + I P+ + L L ++EL KYF G+HVKV++G G TG++++VE++
Sbjct: 433 ILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFRMGDHVKVIAGRYEGDTGLIVRVEENF 492
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQ 363
+I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQ
Sbjct: 493 VILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTMGVIVRLERETFQ 552
Query: 364 VLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEH 422
VL +V V+ + + K + + V D N + VKD+V++++GP G++G + H
Sbjct: 553 VLNM---HGKVVTVRHQAVNRKKDNRFAVALDSEDNNIHVKDIVKVIDGPHSGREGEIRH 609
Query: 423 IYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRI--PQ 480
++R F+H + +E+ G K+ V+ GGS+ R+ ++ PRI P
Sbjct: 610 LFRNYAFLHCKKLVENGGMFVCKTRYLVLAGGSKP---RDVTNFTIGGFAPMSPRISSPM 666
Query: 481 SPG-----RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRV 535
P GG GG RG + L+G TV++ GPYKGY G V D + RV
Sbjct: 667 HPSGSGPRGGMAGGGGGGGAGRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARV 726
Query: 536 ELESQMKVVTVDRSMI----------SDNVVVSTPY--RDTPRYGMGSETPMHPSRTPLH 583
EL S + ++VDR + + + V TP TP YG GS TPM+ S+TPLH
Sbjct: 727 ELHSTCQTISVDRQRLTTVGARRSGGTTSTHVRTPIYGSQTPMYGTGSRTPMYGSQTPLH 786
Query: 584 PYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWGTS 634
TP+HDG RTP + AW+P P +P R D+ +P +G +
Sbjct: 787 DGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADEEYDYRYDDEPSPSPQGYGGT 846
Query: 635 PQYQ-PGSP--PSRAYEAP----TPGS-----------GWASTPGGNYSDAGTPRDSSST 676
P Q PG P PS AP TPG+ A +P G+Y + +P+ S
Sbjct: 847 PNPQTPGYPDVPSPQVNAPYHPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQ---SY 903
Query: 677 YVNAPSP--YLPS-TPGGQPMTPNSASYL----PGTPGGQPMTPGT---GGLDAMSPVIG 726
+ APSP Y + +P TP+ +Y P G PMTPG GG + +P
Sbjct: 904 HQVAPSPVGYQNTHSPASYHPTPSPMAYQASPSPSPMGYSPMTPGAPSPGGYNPHTPGSS 963
Query: 727 ADN-EGPWFMPDIL--VRRSGEESVV----GVIREVLPDGSCRVVLGSSGNGDTITALPN 779
+ W DI VR + ++S V G+IR V G C V+L S +I+ +
Sbjct: 964 IEQISSDWVTTDIQVKVRDTFQDSQVIGQTGIIRSVT-GGLCSVLLQDSEKVISISG--D 1020
Query: 780 EIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+E V P K ++K++ G R ATG L+ +D DGIV++D+ +KIL++ L KL
Sbjct: 1021 HLEPVTPTKNSRVKVILGEDREATGVLLSIDNEDGIVRMDLDDQLKILNLHFLGKL 1076
>gi|350414148|ref|XP_003490220.1| PREDICTED: transcription elongation factor SPT5-like [Bombus
impatiens]
Length = 1133
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 296/879 (33%), Positives = 445/879 (50%), Gaps = 73/879 (8%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+S++A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V +
Sbjct: 269 LQIKSIVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKE 328
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V VD + +V +KL+PRID L E
Sbjct: 329 QTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSESEA 388
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+ +K+ P + + + R + V GD+ G + GFLYK + +I
Sbjct: 389 LKRKRKRRPAAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTTSAI 443
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKG-----HFMKGDAVIVIKGDLK 238
A+ ++PT ELE+F E E D++ A K+ F GD V V +G+L
Sbjct: 444 IAEGVKPTLSELERFEEAPEGVELDLSGTPATGAGNKEDATVTHSFSTGDNVEVCEGELI 503
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
NL+G + +D + + P+ + L + L + EL KYF G+HVKVV+G G TG++++
Sbjct: 504 NLQGKIVSIDGNMIMVMPKHEELREALEFQASELRKYFTMGDHVKVVAGRYEGDTGLIVR 563
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
VEQ+ +++ SD + ++ V D+ S++ TG+ +G ++ DLV LD + GVI+R+E
Sbjct: 564 VEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIVRLE 623
Query: 359 SEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCK 414
E F VL K + RP+ L K RE + + D +NT+ KD+V++V+GP
Sbjct: 624 RENFHVLSMHGKVIEARPQ-GLTKRRE-----NRNAVALDSQQNTIQRKDIVKVVDGPHA 677
Query: 415 GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT 474
G+ G ++H+YR F+H R +++ G K+ + GG+++N +
Sbjct: 678 GRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKSNISSMSPVAGFMSPRIA 737
Query: 475 PPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
P P G GG G GG L+GTT+K+ GPYKG G V D + R
Sbjct: 738 SPMHPSGGGFGRGGGGGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGIVKDATETTAR 797
Query: 535 VELESQMKVVTVDRSMISDNVVVS-----TPYRDTPRYGMGSETPMHP---SRTPLHPYM 586
VEL S + ++VDRS I++ V++ + Y TP YG G +TPM+ S+TP+H
Sbjct: 798 VELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYG-GGQTPMYARDGSKTPMHGSQ 856
Query: 587 TPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQ 638
TPM + G+ TP HDG RTP + AW+P +P R N DG G SP Y
Sbjct: 857 TPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGGSPGYA 916
Query: 639 PGSPPSRAYEAPTPGSGWASTPG-GNYSDAGTPRDSSST------YVNAPSPY---LPST 688
PG P + + TPG+ + S +Y + +P S+S YV PSP ++
Sbjct: 917 PGYPSTGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSASASPSPTGYVATPSPSGTGYTTS 976
Query: 689 PGGQPMTPNSASYLPGTPG--GQPMTPGT--GGLDAM--SPVIGADNEGPWFMPDILVR- 741
P G TP+ Y P TPG G P P T GLD S +IG W DI VR
Sbjct: 977 PHGAFATPSPMGYSPMTPGVAGSPYNPQTPGAGLDTNVGSGIIGG---AEWHTTDIEVRI 1033
Query: 742 RSGEESVV-----GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMG 796
R + GVIR + G C + L + + E+E V P + D++K++
Sbjct: 1034 RDSHQDPALAGQQGVIRGI-SGGMCSIFLPVEDR--VVNLICEELEPVVPSRGDRVKVII 1090
Query: 797 GPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
G R A G L+ +D +G+VK++ +VK+L + L K+
Sbjct: 1091 GEDREAVGTLLSIDNQEGVVKLNKD-EVKMLHLRFLCKM 1128
>gi|441652999|ref|XP_003270421.2| PREDICTED: transcription elongation factor SPT5 isoform 2 [Nomascus
leucogenys]
Length = 1087
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 294/909 (32%), Positives = 461/909 (50%), Gaps = 110/909 (12%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 206 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 264 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 324 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 378
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 379 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 436
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 437 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 496
Query: 305 IILSDTTKEDI--RVFADDVV--ESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
I+ SD T ++ R + + E ++ +G+ G +E +LV LD + GVI+R+E E
Sbjct: 497 ILFSDLTMHEVVDRKVGEGCMCQEETQTASGVDVGGQHEWGELVQLDPQTVGVIVRLERE 556
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGP 419
FQVL +V V+ + + K + + V D +N + VKD+V++++GP G++G
Sbjct: 557 TFQVLNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGE 613
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIP 479
+ H++R F+H + +E+ G K+ V+ GGS+ N P
Sbjct: 614 IRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAP 664
Query: 480 QSPGRYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRV 525
SP S P AGG+ G + L+G TV++ GPYKGY G V
Sbjct: 665 MSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVV 724
Query: 526 VDVKGQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSET 573
D + RVEL S + ++VDR ++ + TP TP YG GS T
Sbjct: 725 KDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRT 784
Query: 574 PMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWE 624
PM+ S+TPL TP+HDG RTP + AW+P P +P R D+
Sbjct: 785 PMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEP 844
Query: 625 DGNPGSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWAS 658
+P ++G +PQY P +P + A Y AP+P +
Sbjct: 845 TPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQP 904
Query: 659 TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT--- 715
+P P + ++P+ Y P TP PM AS P G PMTPG
Sbjct: 905 SPSPQSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSP 960
Query: 716 GGLDAMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSS 768
GG + +P G + N W DI V+ + VV GVIR V G C V L S
Sbjct: 961 GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDS 1019
Query: 769 GNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILD 828
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL+
Sbjct: 1020 EKVVSISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILN 1077
Query: 829 MAILAKLAQ 837
+ L KL +
Sbjct: 1078 LRFLGKLLE 1086
>gi|390356004|ref|XP_003728680.1| PREDICTED: transcription elongation factor SPT5-like
[Strongylocentrotus purpuratus]
Length = 1089
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 316/923 (34%), Positives = 467/923 (50%), Gaps = 151/923 (16%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+S++A++ LK Y+YIE+ K+ HVK+A G+ + ++QK +VPI+EMTDVL V
Sbjct: 218 LQIKSIVAVEGLKGYVYIESYKQTHVKQAINGVGMLRIGQWTQK--MVPIKEMTDVLKVV 275
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREV 124
+ L WVR+K G YK DL +V VD + +V +KL+PRID +
Sbjct: 276 KETAMLKGKAWVRLKRGVYKDDLGQVDYVDQTQNQVILKLLPRIDYNRPRGIQRTAATAA 335
Query: 125 AKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K P + +++ R + V GD+ G + GFL+KT +M +I
Sbjct: 336 EKRKRRRPEQKLFDIEAIRRIGGDVTS-----DGDFLVFEGNRYSRKGFLFKTFAMSAII 390
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
A+ I+PT ELE+F E+ + ++ + S + F GD V V++G+L +L+G V
Sbjct: 391 AEGIKPTLSELERFEDKPEDIDVELVARSKSSKEKSH-SFAPGDNVEVVEGELIHLQGKV 449
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
+ VD + + P+ + L TL + EL K+F+ G+HVKV++G G TG+V++VE ++
Sbjct: 450 KSVDGNTILVLPKHEDLKDTLEFPAHELRKHFKIGDHVKVIAGRYEGDTGLVVRVEDNLA 509
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ E++TG+ +G ++L DLV LD + G I+R+E E FQV
Sbjct: 510 IVFSDLTMHEMKVLPRDLQLCQEMSTGVDSLGQFQLGDLVQLDPQTVGSIVRLEKETFQV 569
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L ++ VK + + K + + V D +N + VKD+V++++GP G++G V+HI
Sbjct: 570 LNM---HNKLVQVKPQAVTRKKDSRHAVALDAEQNNLQVKDIVKVIDGPHSGREGEVKHI 626
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR-FNSLRTPPRI--PQ 480
YR F+H R E+ G ++ V+ GGSR D YS F + PRI P
Sbjct: 627 YRNYAFLHSRLMTENGGVFVVRNRHIVLAGGSRKT-----DGYSTGFTPMS--PRITSPM 679
Query: 481 SPGRYSRGGPPAGGRNRGGRGGHDA------LVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
P + P G GG G L+G TV++ GP+KG+ G V D + R
Sbjct: 680 HPSGGGQQQGPGAGGPGGGGRGRGRVGRDRELIGQTVRITKGPFKGHIGIVKDATESTAR 739
Query: 535 VELESQMKVVTVDR---SMISDNVV--VSTPY-RDTPRYGMGSETPMH--PSRTPLHPYM 586
+EL S K + VDR +++SD V ++T Y R+TP Y GS+TPM+ SRTP++
Sbjct: 740 IELHSTCKTINVDRGRMNIVSDQVRSGMTTAYSRNTPMY--GSQTPMYGSGSRTPMYGSQ 797
Query: 587 TPMRDAGATPIH-------DGMRTPMRDRAWNPYTPMSP-----------PRDNWEDGNP 628
TP+ D G TP + DG TP R AW+P P +P P + G P
Sbjct: 798 TPLHDGGGTPHYGSMTPSRDGSMTPSRSGAWDPTAPSTPMSFDESSPSPQPYGSTTPGTP 857
Query: 629 GSWGTSPQ---------------------------------------YQPGSPPSRAYE- 648
G G PQ YQP PS +++
Sbjct: 858 GYSG-EPQSPGQGPYTPATPNSSSGMYGSESTYSPYGGQTQSPSPGSYQPTPSPSSSFQP 916
Query: 649 APTPGSGWAS-TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPG 707
AP+PGS A+ +P G Y TP S +Y PSP S PM P+ Y P TPG
Sbjct: 917 APSPGSYQATPSPSGTYH---TP--SPGSYQGNPSPLGYS--ANTPMAPSPLGYNPQTPG 969
Query: 708 GQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVR---RSGEESVV---GVIREV------ 755
G M P + W DI+VR + S++ GVIR V
Sbjct: 970 GDIMHPA---------------QSDWHTQDIMVRIKDSHDDPSLIFKEGVIRSVQGPLCS 1014
Query: 756 --LPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTD 813
LPDG RVV T+ AL +E V P KTD++K++ G R +TG LI +D D
Sbjct: 1015 VYLPDGEDRVV--------TVKAL--HLEPVMPSKTDRVKVIMGDDRESTGTLINIDAED 1064
Query: 814 GIVKVDV-SLDVKILDMAILAKL 835
GIVK+D+ + D+KIL + +LAKL
Sbjct: 1065 GIVKMDLGAADIKILQLKMLAKL 1087
>gi|328775915|ref|XP_003249083.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor SPT5
[Apis mellifera]
Length = 1134
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 305/884 (34%), Positives = 452/884 (51%), Gaps = 76/884 (8%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+SV+A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V +
Sbjct: 269 LQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKE 328
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V VD + +V +KL+PRID L E
Sbjct: 329 QTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSESEA 388
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+ +KK P + + + R + V GD+ G + GFLYK + +I
Sbjct: 389 LKRKKKRRPAAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTTSAI 443
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKK------GHFMKGDAVIVIKGDL 237
A+ ++PT ELE+F E E D++ A+ K F GD V V +G+L
Sbjct: 444 IAEGVKPTLSELERFEEAPEGVELDLSGAPGTGASGNKEDSAVTHSFSTGDNVEVCEGEL 503
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVL 297
NL+G + +D + + P+ + L + L + EL KYF G+HVKVV+G G TG+++
Sbjct: 504 INLQGKIVSIDGNMIMVMPKHEELKEALEFQASELRKYFTMGDHVKVVAGRYEGDTGLIV 563
Query: 298 KVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRV 357
+VEQ+ +++ SD + ++ V D+ S++ TG+ +G ++ DLV LD + GVI+R+
Sbjct: 564 RVEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIVRL 623
Query: 358 ESEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPC 413
E E F VL K + RP+ L K RE + + D +NT+ KD+V++V+GP
Sbjct: 624 ERENFHVLSMHGKVIEARPQ-GLTKRRE-----NRNAVALDSQQNTIQKKDIVKVVDGPH 677
Query: 414 KGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLR 473
G+ G ++H+YR F+H R +++ G K+ + GGS++N + + F S R
Sbjct: 678 AGRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGSKSN-ISSMSPMTGFMSPR 736
Query: 474 TPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSV 533
+ S G + RGG G GG L+GTT+K+ GPYKG G V D +
Sbjct: 737 IASPMHPSGGGFGRGGGGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGIVKDAIDTTA 796
Query: 534 RVELESQMKVVTVDRSMISDNVVVS-----TPYRDTPRYGMGSETPMHP---SRTPLHPY 585
RVEL S + ++VDRS I++ V++ + Y TP YG G +TPM+ S+TP+H
Sbjct: 797 RVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYG-GGQTPMYARDGSKTPMHGS 855
Query: 586 MTPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY 637
TPM + G+ TP HDG RTP + AW+P +P R N DG G SP Y
Sbjct: 856 QTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGGSPGY 915
Query: 638 QPGSPPSRAYEAP-TPGSGWAS-------TPGGNYSDAGTPRDSSSTYVNAPSPY---LP 686
PG PP+ P TPG+ + S P + + + T S + YV PSP
Sbjct: 916 APGYPPTGGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPAGYVATPSPSGTGYT 975
Query: 687 STPGGQPMTPNSASYLPGTPG--GQPMTPGT--GGLDA--MSPVIGADNEGPWFMPDILV 740
++P G TP+ Y P TPG G P P T GLD + VIG W DI V
Sbjct: 976 TSPHGAFATPSPMGYSPMTPGVAGSPYNPQTPGAGLDTGVGAGVIGGTE---WHTTDIEV 1032
Query: 741 R-RSGEESVV-----GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKI 794
R R + GVIR + G C V L + + E+E V P + D++K+
Sbjct: 1033 RIRDSHQDPALAGQQGVIRGI-SGGMCAVFLPVEDR--VVNLVCEELEPVVPSRGDRVKV 1089
Query: 795 MGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQP 838
+ G R A G L+ +D +G+VK++ +VK+L + L K+ P
Sbjct: 1090 IIGEDREAVGTLLSIDNQEGVVKLNKD-EVKMLHLRFLCKMKAP 1132
>gi|380016440|ref|XP_003692193.1| PREDICTED: transcription elongation factor SPT5-like isoform 2 [Apis
florea]
Length = 1077
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 304/882 (34%), Positives = 454/882 (51%), Gaps = 75/882 (8%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+SV+A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V +
Sbjct: 215 LQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKE 274
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V VD + +V +KL+PRID L E
Sbjct: 275 QTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSESEA 334
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+ +KK P + + + R + V GD+ G + GFLYK + +I
Sbjct: 335 LKRKKKRRPAAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTTSAI 389
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKK------GHFMKGDAVIVIKGDL 237
A+ ++PT ELE+F E E D++ A+ K F GD V V +G+L
Sbjct: 390 IAEGVKPTLSELERFEEAPEGVELDLSGAPGTGASGNKEDSAVTHSFSTGDNVEVCEGEL 449
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVL 297
NL+G + +D + + P+ + L + L + EL KYF G+HVKVV+G G TG+++
Sbjct: 450 INLQGKIVSIDGNMIMVMPKHEELKEALEFQASELRKYFTMGDHVKVVAGRYEGDTGLIV 509
Query: 298 KVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRV 357
+VEQ+ +++ SD + ++ V D+ S++ TG+ +G ++ DLV LD + GVI+R+
Sbjct: 510 RVEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIVRL 569
Query: 358 ESEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPC 413
E E F VL K + RP+ L K RE + + D +NT+ KD+V++V+GP
Sbjct: 570 ERENFHVLSMHGKVIEARPQ-GLTKRRE-----NRNAVALDSQQNTIQKKDIVKVVDGPH 623
Query: 414 KGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLR 473
G+ G ++H+YR F+H R +++ G K+ + GG+++N + + F S R
Sbjct: 624 AGRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKSN-ISSMSPMTGFMSPR 682
Query: 474 TPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSV 533
+ S G + RGG G GG L+GTT+K+ GPYKG G V D +
Sbjct: 683 IASPMHPSGGGFGRGGGGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGIVKDAIDTTA 742
Query: 534 RVELESQMKVVTVDRSMISDNVVVS-----TPYRDTPRYGMGSETPMHP---SRTPLHPY 585
RVEL S + ++VDRS I++ V++ + Y TP YG G +TPM+ S+TP+H
Sbjct: 743 RVELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYG-GGQTPMYARDGSKTPMHGS 801
Query: 586 MTPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY 637
TPM + G+ TP HDG RTP + AW+P +P R N DG G SP Y
Sbjct: 802 QTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGGSPGY 861
Query: 638 QPGSPPSRAYEAP-TPGSGWAS-------TPGGNYSDAGTPRDSSSTYVNAPSPY---LP 686
PG PP+ P TPG+ + S P + + + T S + YV PSP
Sbjct: 862 APGYPPTGGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPAGYVATPSPSGTGYT 921
Query: 687 STPGGQPMTPNSASYLPGTPGG--QPMTPGTGGLDA--MSPVIGADNEGPWFMPDILV-- 740
++P G TP+ Y P TPG P TPG GLD + VIG W DI V
Sbjct: 922 TSPHGAFATPSPMGYSPMTPGSPYNPQTPGA-GLDTGVGAGVIGGTE---WHTTDIEVRI 977
Query: 741 RRSGEESVV----GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMG 796
R S ++ + GVIR + G C V L + + E+E V P + D++K++
Sbjct: 978 RDSHQDPALAGQQGVIRGIT-GGMCAVFLPVEDR--VVNLVCEELEPVVPSRGDRVKVII 1034
Query: 797 GPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQP 838
G R A G L+ +D +G+VK++ +VK+L + L K+ P
Sbjct: 1035 GEDREAVGTLLSIDNQEGVVKLNKD-EVKMLHLRFLCKMKAP 1075
>gi|242001250|ref|XP_002435268.1| transcription elongation factor SPT5, putative [Ixodes scapularis]
gi|215498598|gb|EEC08092.1| transcription elongation factor SPT5, putative [Ixodes scapularis]
Length = 961
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 288/853 (33%), Positives = 428/853 (50%), Gaps = 116/853 (13%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQIRSV+A + LK YIYIEA K HVK+ +G+ N+ Y Q +VPI+EMTDVL V
Sbjct: 161 LQIRSVVAPEGLKGYIYIEAYKHTHVKQVIQGVGNLRIGLYQQ--TMVPIKEMTDVLRVT 218
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE---GRE 123
+ L WVR+K G Y+ DLA+V VD + +V +KL+PR+D L L G
Sbjct: 219 KEQAQLRPKQWVRLKRGIYRDDLAQVDYVDTAQSQVNLKLLPRVDYTRLRGALRPAAGES 278
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK P + +VD R + V GD+ G + GFLYK +M +I
Sbjct: 279 EKRKKSKRPAAKLFDVDAIRAVGGEV-----TTDGDFLIFEGNRYSRKGFLYKAFAMSAI 333
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
AQ ++PT ELEKF E E ++ ++GH F GD V V +G+L +L+G
Sbjct: 334 IAQGVKPTLSELEKFEEQPEGLELELGESR----KEEQGHSFAPGDTVEVAEGELVHLQG 389
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + + P + L + L + EL K F+ G+HVKV++G G TG++++VE +
Sbjct: 390 KIISIDGNKITMLPRHEDLTEPLDFQAHELKKSFKMGDHVKVIAGRFEGDTGLIVRVEDN 449
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++ SD T +++V D+ +++ TG+ +G ++ DLV LD + GVI+R+E E F
Sbjct: 450 MVVLFSDLTMHELKVLPRDLQLCADMATGVDSLGQFQWGDLVQLDPQTVGVIVRLEKENF 509
Query: 363 QVLKGVPDRPEVALVKLREIKCKLE-KKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVE 421
QVL +V VK + + K + +K+ D ++N + ++D+V++++GP G QG V+
Sbjct: 510 QVLSM---NGKVVQVKHQSVNKKCDARKAVALDSDQNQIQIRDIVKVIDGPHSGSQGVVK 566
Query: 422 HIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQS 481
HI+R F+H R LE+ G K+ ++ G +R
Sbjct: 567 HIFRSFAFLHSRMMLENGGIFVCKTRHLLLAGSTRVRDSE-------------------- 606
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
L+G T+K+ GPYKG+ G V D + RVEL ++
Sbjct: 607 ------------------------LIGETIKITQGPYKGHIGIVKDATESTARVELHTKC 642
Query: 542 KVVTVDRSMIS--------DNVVVSTPYRDTPRYGMGSETPMHP--SRTPLHPYMTPMRD 591
+ ++VDRS I+ VST Y TP YG GS+TPM+ SRTP++ TP+ +
Sbjct: 643 QTISVDRSRIAVVGSASKGGGGGVST-YNRTPMYGSGSQTPMYSSGSRTPMYGSQTPLYE 701
Query: 592 AGA---------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSP 642
AG+ TP+HDG RTP+ AW+P T +P R +D SP YQP +P
Sbjct: 702 AGSRTPHFGGGQTPVHDGSRTPVHG-AWDPTTANTPARPELDDYQLEE--ASPSYQPATP 758
Query: 643 PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP--YLPS-TPGGQPMTPNSA 699
+A E P G TPG SD G S Y +PSP Y PS +P G TP+
Sbjct: 759 GYQAPETPQ-GPYTPQTPGMYGSDHGF-----SPYQASPSPTAYQPSPSPKGYVATPSPV 812
Query: 700 SYLPGTP------GGQPMTPGT-GGLDAMSPVIGADNEG-PWFMPDILVR------RSGE 745
++ GTP G PMTPG + +P G + W D+ VR G
Sbjct: 813 AFQAGTPSPSTYGGYSPMTPGAPSPFNPQTPGAGMEALSVEWQTMDLEVRIKDTHEDDGM 872
Query: 746 ESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGK 805
GVIR + G C V L ++ L +E V P DK+K++ G R TG+
Sbjct: 873 IGQTGVIRGI-SGGMCSVFLLKEDR--VVSILSEHLEPVVPVAKDKVKVILGEDREETGE 929
Query: 806 LIGVDGTDGIVKV 818
L+ +D +G+VK+
Sbjct: 930 LLSIDHPEGVVKM 942
>gi|260820507|ref|XP_002605576.1| hypothetical protein BRAFLDRAFT_282155 [Branchiostoma floridae]
gi|229290910|gb|EEN61586.1| hypothetical protein BRAFLDRAFT_282155 [Branchiostoma floridae]
Length = 946
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 309/897 (34%), Positives = 455/897 (50%), Gaps = 90/897 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+S++A + LK Y+Y+E+ K+ HVK A G+ N+ + Q+ +VPI+EMTDVL V
Sbjct: 68 LQIKSIVAKEGLKGYVYVESFKQTHVKAAITGVGNLRMGLWQQQ--MVPIKEMTDVLKVV 125
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ-----ALANKLEG 121
+ + L +WVR+K G YK DLA+V V+ V +KLIPR+D L + L+
Sbjct: 126 KETVALKPKSWVRLKRGVYKDDLAQVDYVEPSMNSVHLKLIPRVDYTKLRGCTLFSSLQD 185
Query: 122 REVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMK 181
+ +KK PP + +VD R + V GD+ G + GFL+KT M
Sbjct: 186 QGEKRKKFRRPPQKLFDVDAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLFKTFVMS 240
Query: 182 SISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLK 241
+I + ++PT ELEKF E + ++ S + K+ GD V V +G+L +L+
Sbjct: 241 AIITEGVKPTLSELEKFEDQPEGMDIELVPESRGKVD-KQHSLAPGDIVEVAEGELIHLQ 299
Query: 242 GWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQ 301
G V VD V I P+ + L + L S EL K+F G+HVKV++G G TG++++VE
Sbjct: 300 GKVMTVDGNKVTIMPKHEDLKEPLEFPSHELRKHFNMGDHVKVIAGRYEGDTGLIVRVED 359
Query: 302 HVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEA 361
H +++ SD T +++V D+ +E+++G+ +G ++ DLV+LD + G+I+R+E E+
Sbjct: 360 HYVVLFSDLTMHELKVRPQDLQLCTEMSSGVDSMGQFQFGDLVMLDPQTVGIIVRLERES 419
Query: 362 FQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPV 420
F VL +V VK + K ++ V D +N + V+D+V++++G G+QG V
Sbjct: 420 FSVLNM---HGKVVNVKQNAVTQKKNTRNAVALDAEQNNIQVRDIVKVIDGQHSGRQGEV 476
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR-ANGDRNGDAYSRFNSLRTPPRIP 479
+H+YR F++ + ++ G +S V+ GGSR +N ++ + + P+ P
Sbjct: 477 KHLYRSYAFLYSKMMTDNGGMFVVRSRHVVLAGGSRPSNTTTVMGGFAPMSPRLSSPQHP 536
Query: 480 QSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELES 539
S G GG GR RG L+G TV++ GPYKGY G V D + RVEL S
Sbjct: 537 SSGGGDRGGGGGGQGRGRGRARRDMELIGQTVRICQGPYKGYIGMVKDATESTARVELHS 596
Query: 540 QMKVVTVDRSMISDNVV-------VSTPYRDTPRYGMGSETPMH--PSRTPLHPYMTPMR 590
K ++VDRS + N V ST Y TP Y GS+TPM+ SRTP++ TP
Sbjct: 597 SCKTISVDRSRL--NPVGGPTRGGASTSYGRTPMY--GSQTPMYGAGSRTPMYGSQTPQY 652
Query: 591 DAG-------ATPIH-DGMRTPMRDRAWNPYTPMSPPRDN-----WEDGNPGSWG----- 632
+ G TP+H DG RTP R AW+P P +P R + ++D P G
Sbjct: 653 EGGRTPHYGSQTPLHDDGSRTPGRTGAWDPTNPNTPSRPDDFDYRFDDATPSPQGYGAAT 712
Query: 633 ---TSPQYQPGSPP---SRAYEAPTPGSG-----------WASTPGGNYSDAGTPRDSSS 675
+P Y P S + TPG+ + TP S TP S +
Sbjct: 713 PNPATPGYVSADSPADHSGPFTPQTPGTAGMYGSETTYSPYQPTPSPQGSYQATP--SPA 770
Query: 676 TYVNAPSP--YLPS-TPGGQPMTPNSASY--LPGTPGGQPMTPGT---GGLDAMSPVIGA 727
Y APSP Y + +P G TP+ A Y P G PMTPG GG + +P
Sbjct: 771 GYQPAPSPAGYQATPSPAGYQATPSPAGYQATPSPLGFSPMTPGAPSPGGFNPQTPGASL 830
Query: 728 DNEGP-WFMPDILVR-RSGEES-----VVGVIREVLPDGSCRVVLGSSGNGDTITALPNE 780
D G W DI VR R E GVIR G C V L + + +
Sbjct: 831 DQGGTDWQTVDITVRIRETHEDPDLIHQRGVIRS-QSGGMCSVYLSEADK--MVNVMGEH 887
Query: 781 IEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
+E P K DK+K++ G R ATG LI +DG DGIV++D+ +KIL + L KL Q
Sbjct: 888 LEPEAPAKNDKVKVILGEDREATGTLINIDGQDGIVRMDLDAQLKILQLRFLGKLGQ 944
>gi|340717674|ref|XP_003397304.1| PREDICTED: transcription elongation factor SPT5-like isoform 1
[Bombus terrestris]
Length = 1133
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 293/879 (33%), Positives = 447/879 (50%), Gaps = 73/879 (8%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+S++A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V +
Sbjct: 269 LQIKSIVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKE 328
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V VD + +V +KL+PRID L E
Sbjct: 329 QTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSESEA 388
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+ +K+ P + + + R + V GD+ G + GFLYK + +I
Sbjct: 389 LKRKRKRRPAAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTTSAI 443
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKG-----HFMKGDAVIVIKGDLK 238
A+ ++PT ELE+F E E D++ A K+ F GD V V +G+L
Sbjct: 444 IAEGVKPTLSELERFEEAPEGVELDLSGTPGTGAGNKEDATVTHSFSTGDNVEVCEGELI 503
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
NL+G + +D + + P+ + L + L + EL KYF G+HVKVV+G G TG++++
Sbjct: 504 NLQGKIVSIDGNMIMVMPKHEELREALEFQASELRKYFTMGDHVKVVAGRYEGDTGLIVR 563
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
VEQ+ +++ SD + ++ V D+ S++ TG+ +G ++ DLV LD + GVI+R+E
Sbjct: 564 VEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIVRLE 623
Query: 359 SEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCK 414
E F VL K + RP+ L K RE + + D +NT+ KD+V++V+GP
Sbjct: 624 RENFHVLSMHGKVIEARPQ-GLTKRRE-----NRNAVALDSQQNTIQRKDIVKVVDGPHA 677
Query: 415 GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT 474
G+ G ++H+YR F+H R +++ G K+ + GG+++N +
Sbjct: 678 GRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKSNMSSMSPVAGFMSPRIA 737
Query: 475 PPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
P P G GG G GG L+GTT+K+ GPYKG G V D + R
Sbjct: 738 SPMHPSGGGFGRGGGGGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGIVKDATETTAR 797
Query: 535 VELESQMKVVTVDRSMISDNVVVS-----TPYRDTPRYGMGSETPMHP---SRTPLHPYM 586
VEL S + ++VDRS I++ V++ + Y TP YG G +TPM+ S+TP+H
Sbjct: 798 VELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYG-GGQTPMYARDGSKTPMHGSQ 856
Query: 587 TPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQ 638
TPM + G+ TP HDG RTP + AW+P +P R N DG G SP Y
Sbjct: 857 TPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGGSPGYA 916
Query: 639 PGSPPSRAYEAPTPGSGWAS-------TPGGNYSDAGTPRDSSSTYVNAPSPY---LPST 688
PG P + + TPG+ + S P + + + T S + YV PSP ++
Sbjct: 917 PGYPSTGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPTGYVATPSPTGTGYTTS 976
Query: 689 PGGQPMTPNSASYLPGTPG--GQPMTPGTGG--LDAM--SPVIGADNEGPWFMPDILV-- 740
P G TP+ Y P TPG G P P T G LD S +IG + W DI V
Sbjct: 977 PHGAFATPSPMGYSPMTPGVAGSPYNPQTPGANLDTNVGSGIIGGAD---WHTTDIEVRI 1033
Query: 741 RRSGEESVV----GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMG 796
R S ++ + GV+R + G C + L + + ++E V P + D++K++
Sbjct: 1034 RDSHQDPALAGQQGVVRGI-SGGMCAIFLPVEDR--VVNLICEDLEPVVPSRGDRVKVII 1090
Query: 797 GPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
G R A G L+ +D +G+VK++ +VK+L + L K+
Sbjct: 1091 GEDREAVGTLLSIDNQEGVVKLNKD-EVKMLHLRFLCKM 1128
>gi|340717676|ref|XP_003397305.1| PREDICTED: transcription elongation factor SPT5-like isoform 2
[Bombus terrestris]
Length = 1075
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 292/877 (33%), Positives = 446/877 (50%), Gaps = 72/877 (8%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+S++A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V +
Sbjct: 214 LQIKSIVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKE 273
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V VD + +V +KL+PRID L E
Sbjct: 274 QTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSESEA 333
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+ +K+ P + + + R + V GD+ G + GFLYK + +I
Sbjct: 334 LKRKRKRRPAAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTTSAI 388
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKG-----HFMKGDAVIVIKGDLK 238
A+ ++PT ELE+F E E D++ A K+ F GD V V +G+L
Sbjct: 389 IAEGVKPTLSELERFEEAPEGVELDLSGTPGTGAGNKEDATVTHSFSTGDNVEVCEGELI 448
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
NL+G + +D + + P+ + L + L + EL KYF G+HVKVV+G G TG++++
Sbjct: 449 NLQGKIVSIDGNMIMVMPKHEELREALEFQASELRKYFTMGDHVKVVAGRYEGDTGLIVR 508
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
VEQ+ +++ SD + ++ V D+ S++ TG+ +G ++ DLV LD + GVI+R+E
Sbjct: 509 VEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIVRLE 568
Query: 359 SEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCK 414
E F VL K + RP+ L K RE + + D +NT+ KD+V++V+GP
Sbjct: 569 RENFHVLSMHGKVIEARPQ-GLTKRRE-----NRNAVALDSQQNTIQRKDIVKVVDGPHA 622
Query: 415 GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT 474
G+ G ++H+YR F+H R +++ G K+ + GG+++N +
Sbjct: 623 GRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKSNMSSMSPVAGFMSPRIA 682
Query: 475 PPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
P P G GG G GG L+GTT+K+ GPYKG G V D + R
Sbjct: 683 SPMHPSGGGFGRGGGGGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGIVKDATETTAR 742
Query: 535 VELESQMKVVTVDRSMISDNVVVS-----TPYRDTPRYGMGSETPMHP---SRTPLHPYM 586
VEL S + ++VDRS I++ V++ + Y TP YG G +TPM+ S+TP+H
Sbjct: 743 VELHSTCQTISVDRSHIANVAVLTKDGGFSSYNRTPAYG-GGQTPMYARDGSKTPMHGSQ 801
Query: 587 TPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQ 638
TPM + G+ TP HDG RTP + AW+P +P R N DG G SP Y
Sbjct: 802 TPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGGSPGYA 861
Query: 639 PGSPPSRAYEAPTPGSGWAS-------TPGGNYSDAGTPRDSSSTYVNAPSPY---LPST 688
PG P + + TPG+ + S P + + + T S + YV PSP ++
Sbjct: 862 PGYPSTGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPTGYVATPSPTGTGYTTS 921
Query: 689 PGGQPMTPNSASYLPGTPGG--QPMTPGTGGLDAM--SPVIGADNEGPWFMPDILV--RR 742
P G TP+ Y P TPG P TPG LD S +IG + W DI V R
Sbjct: 922 PHGAFATPSPMGYSPMTPGSPYNPQTPG-ANLDTNVGSGIIGGAD---WHTTDIEVRIRD 977
Query: 743 SGEESVV----GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGP 798
S ++ + GV+R + G C + L + + ++E V P + D++K++ G
Sbjct: 978 SHQDPALAGQQGVVRGI-SGGMCAIFLPVEDR--VVNLICEDLEPVVPSRGDRVKVIIGE 1034
Query: 799 HRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
R A G L+ +D +G+VK++ +VK+L + L K+
Sbjct: 1035 DREAVGTLLSIDNQEGVVKLNKD-EVKMLHLRFLCKM 1070
>gi|260820493|ref|XP_002605569.1| hypothetical protein BRAFLDRAFT_282145 [Branchiostoma floridae]
gi|229290903|gb|EEN61579.1| hypothetical protein BRAFLDRAFT_282145 [Branchiostoma floridae]
Length = 951
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 310/902 (34%), Positives = 456/902 (50%), Gaps = 95/902 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+S++A + LK Y+Y+E+ K+ HVK A G+ N+ + Q+ +VPI+EMTDVL V
Sbjct: 68 LQIKSIVAKEGLKGYVYVESFKQTHVKAAITGVGNLRMGLWQQQ--MVPIKEMTDVLKVV 125
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ-----ALANKLEG 121
+ + L +WVR+K G YK DLA+V V+ V +KLIPR+D L + L+
Sbjct: 126 KETVALKPKSWVRLKRGVYKDDLAQVDYVEPSMNSVHLKLIPRVDYTKLRGCTLFSSLQD 185
Query: 122 REVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMK 181
+ +KK PP + +VD R + V GD+ G + GFL+KT M
Sbjct: 186 QGEKRKKFRRPPQKLFDVDAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLFKTFVMS 240
Query: 182 SISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLK 241
+I + ++PT ELEKF E + ++ S + K+ GD V V +G+L +L+
Sbjct: 241 AIITEGVKPTLSELEKFEDQPEGMDIELVPESRGKVD-KQHSLAPGDIVEVAEGELIHLQ 299
Query: 242 GWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQ 301
G V VD V I P+ + L + L S EL K+F G+HVKV++G G TG++++VE
Sbjct: 300 GKVMTVDGNKVTIMPKHEDLKEPLEFPSHELRKHFNMGDHVKVIAGRYEGDTGLIVRVED 359
Query: 302 HVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEA 361
H +++ SD T +++V D+ +E+++G+ +G ++ DLV+LD + G+I+R+E E+
Sbjct: 360 HYVVLFSDLTMHELKVRPQDLQLCTEMSSGVDSMGQFQFGDLVMLDPQTVGIIVRLERES 419
Query: 362 FQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPV 420
F VL +V VK + K ++ V D +N + V+D+V++++G G+QG V
Sbjct: 420 FSVLNM---HGKVVNVKQNAVTQKKNTRNAVALDAEQNNIQVRDIVKVIDGQHSGRQGEV 476
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR-ANGDRNGDAYSRFNSLRTPPRIP 479
+H+YR F++ + ++ G +S V+ GGSR +N ++ + + P+ P
Sbjct: 477 KHLYRSYAFLYSKMMTDNGGMFVVRSRHVVLAGGSRPSNTTTVMGGFAPMSPRLSSPQHP 536
Query: 480 QSPGRYS-----RGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
S G S GG GR RG L+G TV++ GPYKGY G V D + R
Sbjct: 537 SSGGGKSLPTTLGGGGGGQGRGRGRARRDMELIGQTVRICQGPYKGYIGMVKDATESTAR 596
Query: 535 VELESQMKVVTVDRSMISDNVV-------VSTPYRDTPRYGMGSETPMH--PSRTPLHPY 585
VEL S K ++VDRS + N V ST Y TP Y GS+TPM+ SRTP++
Sbjct: 597 VELHSSCKTISVDRSRL--NPVGGPTRGGASTSYGRTPMY--GSQTPMYGAGSRTPMYGS 652
Query: 586 MTPMRDAG-------ATPIH-DGMRTPMRDRAWNPYTPMSPPRDN-----WEDGNPGSWG 632
TP + G TP+H DG RTP R AW+P P +P R + ++D P G
Sbjct: 653 QTPQYEGGRTPHYGSQTPLHDDGSRTPGRTGAWDPTNPNTPSRPDDFDYRFDDATPSPQG 712
Query: 633 --------TSPQYQPGSPP---SRAYEAPTPGSG-----------WASTPGGNYSDAGTP 670
+P Y P S + TPG+ + TP S TP
Sbjct: 713 YGAATPNPATPGYVSADSPADHSGPFTPQTPGTAGMYGSETTYSPYQPTPSPQGSYQATP 772
Query: 671 RDSSSTYVNAPSP--YLPS-TPGGQPMTPNSASY--LPGTPGGQPMTPGT---GGLDAMS 722
S + Y APSP Y + +P G TP+ A Y P G PMTPG GG + +
Sbjct: 773 --SPAGYQPAPSPAGYQATPSPAGYQATPSPAGYQATPSPLGFSPMTPGAPSPGGFNPQT 830
Query: 723 PVIGADNEGP-WFMPDILVR-RSGEES-----VVGVIREVLPDGSCRVVLGSSGNGDTIT 775
P D G W DI VR R E GVIR G C V L + +
Sbjct: 831 PGASLDQGGTDWQTVDITVRIRETHEDPDLIHQRGVIRS-QSGGMCSVYLSEADK--MVN 887
Query: 776 ALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+ +E P K DK+K++ G R ATG LI +DG DGIV++D+ +KIL + L KL
Sbjct: 888 VMGEHLEPEAPAKNDKVKVILGEDREATGTLINIDGQDGIVRMDLDAQLKILQLRFLGKL 947
Query: 836 AQ 837
Q
Sbjct: 948 GQ 949
>gi|384247506|gb|EIE20992.1| transcription elongation factor Spt5 [Coccomyxa subellipsoidea C-169]
Length = 1114
Score = 397 bits (1020), Expect = e-107, Method: Compositional matrix adjust.
Identities = 308/936 (32%), Positives = 448/936 (47%), Gaps = 137/936 (14%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI-YSQKVMLVPI 56
MQK I+K G L IRSV +HLK YIY+EA KE+HVKEA +GL + Y + LVP+
Sbjct: 205 MQKAINKTEAGEPLLIRSVFYQEHLKGYIYVEAHKESHVKEAIRGLTCLLYGKGATLVPM 264
Query: 57 REMTDVLAVES--KAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQA 114
+EM D + V+S K ++ WVR+KIG Y GDL KVV VD VK+IPR+D A
Sbjct: 265 KEMVDAITVKSVAKGSNIEEGAWVRVKIGPYSGDLGKVVSVDYNSDSARVKVIPRLDYAA 324
Query: 115 LANKLEGRE----VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFK 170
L K E RE A KKP VP F D A++ + VE+RR P Y+ + ++
Sbjct: 325 LVPKEERRERGAPTAGKKPRVPARAFSPAD-AKDQGLIVEQRRKPGGSGYYYILRNQHYE 383
Query: 171 DGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESD-------IASLSTLFANRKKG- 222
DG+L K + + + P +EL++F G +D +A L + +G
Sbjct: 384 DGYLIKQYNRARLELISGLPPLEELQRFNQVGMASRTDEDPEGGELAQLMRSLGDGAEGG 443
Query: 223 ---HFMKGDAVIVIKGDLKNLKGWVEKV-DEENVHIRPEMKGLPKTLAVNSKELCKYFEP 278
+ KGD ++V GDL NL+G V V + V I P GL L ++ +L K+FE
Sbjct: 444 AAVRYEKGDKIVVTGGDLTNLRGRVTNVLPDGRVEIMPTQLGLTDALTFDAGQLRKFFEA 503
Query: 279 GNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDY 338
G++V+V SG G TGM++ VE+ + ++++D+T+E ++VF D+ ESS V +G+ +G Y
Sbjct: 504 GDYVRVNSGQHEGQTGMIVSVEEPICVLMTDSTREQLQVFTRDLAESSNVASGVDTLGAY 563
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVL--KGVPDRPEVALVKLREIKCKLEKKSNVQDRN 396
EL DLV++D+++ GVII V ++ +VL KG D+P V + K+ EIK K+ + D
Sbjct: 564 ELHDLVVIDSSTVGVIISVAKDSCKVLTNKGSVDQPMVKVCKVEEIKNKMTRDGVATDAL 623
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ V I++G KG+ G V+HI++ +F+H LE+ GF+C S GG +
Sbjct: 624 HREILRDATVDIMDGRLKGRSGTVKHIFKKAVFLHLNDLLENGGFVCLMSHKVRTKGGGK 683
Query: 457 A-NGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGH------------ 503
+G G N+LR SP Y+ G PA R G G
Sbjct: 684 GPSGVSAGVKSGLANALR-------SPNPYASGMVPASPRIGGAFGAPPPPRFGGGGGGP 736
Query: 504 -----------------------DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQ 540
D ++G + GP++GYRGR+ V VRVELE+Q
Sbjct: 737 PGGGFGASRGGYGGGGRGRGGPDDQMIGKVTTIAKGPFRGYRGRITKVTPTEVRVELEAQ 796
Query: 541 MKVVTVDRSMISDNVVVSTPYRDTPRY----------GM-------GSETPMHPSRTPLH 583
+VV V R I + R+ PR+ GM GS+TPMHPS TP+H
Sbjct: 797 QRVVGVSRDAIPPEHGGAPLPREPPRFSAAPNTPAHLGMHTTPHRYGSQTPMHPSMTPMH 856
Query: 584 PYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPP 643
P MTP H G+ TP RD AWNP + PR D P + PG+ P
Sbjct: 857 PSMTPS--------HPGLATPGRD-AWNPN--LQTPRHPSSDPGPSTA------TPGTMP 899
Query: 644 SRAYEAPTPGSGWASTPG-----------GNYSDAGTPRDSSSTYVNA---PSPYLPSTP 689
Y A TP A TP + D G + Y N P+ P
Sbjct: 900 YGHYNAGTP----AFTPAFTPAEAPAPTPAGFGDTGM----TQGYSNGGWTPALPTGGPP 951
Query: 690 GGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGP-WFMPDILVRRSGEESV 748
+ + Y P TP P GT D S + GP W D + + +
Sbjct: 952 TVGGVGGPTPGYYP-TPAATPGV-GTPAYDPDSGQTMGASAGPGWEHYDGIAVQLADSGR 1009
Query: 749 VGVIREVLPDGSCRVVLGSSG---------NGDTITALPNEIEIVPPRKTDKIKIMGGPH 799
VGV+R + DG+ V LGS + + + + ++++P +K D I++M G
Sbjct: 1010 VGVVRRISADGAAAVALGSEDAEGRLQLPEAAEVVQTVGSNLQLLPTKKKDMIRVMVGDF 1069
Query: 800 RGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
RG G ++ + D IVK+ D+K+L+ ++ L
Sbjct: 1070 RGQIGLVLNMADADAIVKLGEG-DMKVLNKGMIGLL 1104
>gi|345494683|ref|XP_001604079.2| PREDICTED: transcription elongation factor SPT5-like isoform 1
[Nasonia vitripennis]
gi|345494685|ref|XP_003427341.1| PREDICTED: transcription elongation factor SPT5-like isoform 2
[Nasonia vitripennis]
Length = 1157
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 300/900 (33%), Positives = 455/900 (50%), Gaps = 99/900 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+SV+A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDV+ V +
Sbjct: 285 LQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGVWKQQMVPIKEMTDVMRVVKE 344
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V VD + +V +KL+PR+D L E
Sbjct: 345 QTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRVDYTRPRGALRTAQSESEA 404
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+ +KK PP + + + R + V GD+ G + GFLYK + +I
Sbjct: 405 MKRKKKRRPPAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTTSAI 459
Query: 184 SAQNIQPTFDELEKFRTPGENGESDI--ASLSTLFANRKKG---HFMKGDAVIVIKGDLK 238
A+ ++PT ELEKF E + ++ A ++ + A ++ F GD V V +G+L
Sbjct: 460 IAEGVKPTLSELEKFEEAPEGVDLELSGAPVTGVSAGKEDAITHTFSTGDNVEVCEGELL 519
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
NL+G + +D + + P+ + L + L + EL KYF G+HVKVV+G G TG++++
Sbjct: 520 NLQGKIVSIDGNMIMVMPKHEDLKEALEFQASELRKYFTMGDHVKVVAGRYEGDTGLIVR 579
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
VEQ+ +++ SD + ++ V D+ S++ TG+ +G ++ DLV LD + GVI+R+E
Sbjct: 580 VEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDPQTVGVIVRLE 639
Query: 359 SEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCK 414
E F VL K V RP+ L K RE + + D +NT+ KD+V++V+GP
Sbjct: 640 RENFHVLSMHGKVVEARPQ-GLTKRRE-----NRNTVALDSQQNTIQKKDIVKVVDGPHS 693
Query: 415 GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT 474
G+ G ++H+YR F+H R +++ G K+ + GG++AN A + S
Sbjct: 694 GRGGEIKHLYRSFAFLHSRMFIDNGGIFVCKTRHLQLAGGNKANA---ASAMAPMISGFM 750
Query: 475 PPRI--PQSPGRYSRGGPPAGGRNRGGRGGHDA--------------LVGTTVKVRLGPY 518
PRI P P G G GG GG L+GTT+K+ GPY
Sbjct: 751 SPRIASPMHPSGSPAGRGGGGPGGPGGGGGGGGGRGRGRGGARRDRDLIGTTIKITSGPY 810
Query: 519 KGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVST------PYRDTPRYGMGSE 572
KG G V D + RVEL S + ++VDRS I+ NV V T Y TP YG GS+
Sbjct: 811 KGNVGIVKDATETTARVELHSTCQTISVDRSHIA-NVGVPTKDGGFSSYSRTPAYGAGSQ 869
Query: 573 TPMHP-SRTPLHPYMTPMRDAGA--------TPIHD-GMRTPMRDRAWNPYTPMSPPRDN 622
TPM+ S+TP+H TPM + G+ TP HD G RTP + AW+P +P R +
Sbjct: 870 TPMYSGSKTPMHGSQTPMYETGSRTPHYGSMTPSHDAGSRTPGQSGAWDPTVTNTPARTS 929
Query: 623 WEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPG-GNYSDAGTPRDSSS------ 675
DG G SP Y PG P + TPG+ + S G Y + +P S++
Sbjct: 930 DFDGYNIEEGGSPGYAPGYPSGGPFTPQTPGTMYGSEQSFGPYQPSPSPVASATASPSPA 989
Query: 676 TYVNAPSPY---LPSTPGGQPMTPNSASYLPGTPGG-----QPMTPGTGGLDA--MSPVI 725
Y + PSP ++P G +P+ Y P TPGG P TPG+ +DA S V
Sbjct: 990 AYGSTPSPAGTGYTTSPHGAFASPSPMGYSPMTPGGVGSPYNPQTPGS-TIDAGHSSGVF 1048
Query: 726 GADNEGPWFMPDILVR-------RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALP 778
G + W D+ VR +G++ + I G C V L ++ L
Sbjct: 1049 GQE----WHTTDLEVRVRDSNLDAAGQQGYITTIT----GGMCTVFLPREDR--SVNILC 1098
Query: 779 NEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQP 838
+++E V P + D++K++ G R + G L+ +D +G+ K + +VK+L + L K+ P
Sbjct: 1099 DQLEPVVPSQNDRVKVIIGEDRESVGTLLSIDNQEGVFKSNAG-EVKMLQLRFLCKMRSP 1157
>gi|405964095|gb|EKC29617.1| Transcription elongation factor SPT5 [Crassostrea gigas]
Length = 1046
Score = 394 bits (1011), Expect = e-106, Method: Compositional matrix adjust.
Identities = 305/889 (34%), Positives = 464/889 (52%), Gaps = 111/889 (12%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI++VI+ + LK YIYIEA K+ HVK+A G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 201 LQIKAVISKESLKGYIYIEAYKQTHVKQAIDGIGNLRMGQWAQQ--MVPIKEMTDVLKVV 258
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID-------LQALANKL 119
+ L WVR+K G +K DLA+V + + V +K+IPRID L+ +++
Sbjct: 259 KETAQLKPRQWVRLKRGIFKDDLAQVDYFEPAQNIVHLKMIPRIDYTKKRGVLRVHVDEV 318
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
E R KK PP + +VD R + V D + FEN + GFL+K+
Sbjct: 319 EKR----KKKRRPPQKLFDVDAVRAIGGEVSSDGDFL---LFEN--NRYTRKGFLFKSFV 369
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH----FMKGDAVIVIKG 235
M +I A+ ++PT ELEKF E E + L R++G + GD V V +G
Sbjct: 370 MSAIIAEGVKPTLAELEKFEDTPEGAEVE------LVPERQQGEVNHSLIPGDVVEVCEG 423
Query: 236 DLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
+L +L+G V VD + + P+ + L L S EL K+F+ G+HVKV++G G TG+
Sbjct: 424 ELVHLQGKVISVDGNKITMMPKHEDLRDPLEFMSHELKKHFKMGDHVKVIAGRYEGDTGL 483
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
+++VE++++++ SD T +++V D+ +++ TG+ +G Y+ DLV +D + GVI+
Sbjct: 484 IVRVEENLVVLFSDLTMHEMKVLPKDLQLCTDMATGVDSLGQYQFGDLVQIDPQTVGVIV 543
Query: 356 RVESEAFQVL---KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP 412
R+E E FQ+L + + A+ + R+ K + D N++ VKDV+++++GP
Sbjct: 544 RLEKENFQILSMHNKILNLKPAAVTRKRDTKYAV-----ALDSENNSIQVKDVIKVIDGP 598
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
G+QG ++H+YR F+ R E+ G+ ++ V+ GGS +G+R + F +
Sbjct: 599 HSGRQGEIKHLYRSYCFLMSRTMTENGGYFVCRTRHVVLAGGS--SGNRAQLGVTGFAPM 656
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDA---------LVGTTVKVRLGPYKGYRG 523
P PG GG P GG GRG L+GTTV++ GP+KGY G
Sbjct: 657 SPRLSSPAHPGGGGVGGAPGGGGATPGRGRGAGGGLSKRDRDLIGTTVRIIQGPFKGYIG 716
Query: 524 RVVDVKGQSVRVELESQMKVVTVDRSMISDNV------VVSTPYRDTPRYGMGSETPMHP 577
V D + RVEL S K ++VDR+ +S+ V +TP TP + GS+TPM+
Sbjct: 717 IVKDATDSTARVELHSSCKTISVDRARLSNLVGGRSVGSAATPGGRTPMH--GSQTPMYG 774
Query: 578 SRTPLHPYMTPMRD-------AGATPIHD-GMRTPMRDRAWNPYTPMSPPRDN-----WE 624
SRTP++ TP+ D TP+H+ G RTP + AW+P P +P R+N ++
Sbjct: 775 SRTPMYGSQTPLHDGSRTPNYGSMTPLHEPGSRTPGQS-AWDPTNPNTPTRNNDFDYHFD 833
Query: 625 DG-NPGSWGTSPQYQPGSPPSRAYEAPTP---GSGWASTPGGNYSDAGTPRDSSSTYVNA 680
D +PG +G + PG+P Y A TP G TPG +YS P S +Y +A
Sbjct: 834 DNPSPGDYGGATP-NPGTP---GYTADTPSPMGPFTPQTPGTSYSPYAQPSPSPGSY-SA 888
Query: 681 PSPYL----PSTPGGQP----MTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGP 732
PSP PS G QP TP+ Y P TPGG P TPGTG +M AD
Sbjct: 889 PSPGFGGASPSPLGYQPSPSNTTPSPLGYSPMTPGGAPFTPGTGMDQSM-----AD---- 939
Query: 733 WFMPDILVRRSGEES------VVGVIREVLPDGSCRVVLGSSGNGDTITALPNE-IEIVP 785
W +I V+ G+IR V G C + + D + + E +E V
Sbjct: 940 WHTTEIEVKIKETHDDHKLIHQTGIIRSVT-GGMCSLFIPEE---DKVVNIACEHLEPVS 995
Query: 786 PRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAK 834
P K D+ K++ G R G L+ +DGT+G++K D S +++L + L K
Sbjct: 996 PEKGDRAKVILGEERELMGTLLSIDGTEGVIKTD-SGHIRMLPINYLCK 1043
>gi|308805314|ref|XP_003079969.1| probable transcription elongation factor (ISS) [Ostreococcus tauri]
gi|116058426|emb|CAL53615.1| probable transcription elongation factor (ISS) [Ostreococcus tauri]
Length = 926
Score = 391 bits (1004), Expect = e-105, Method: Compositional matrix adjust.
Identities = 303/896 (33%), Positives = 451/896 (50%), Gaps = 116/896 (12%)
Query: 1 MQKCIDKGSE----LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK-VMLVP 55
MQK I+ + +QI S + DHLK YIY+EA +E HV++A +GLR++Y K + LVP
Sbjct: 81 MQKMINLAKQGKPPMQIFSAVCQDHLKGYIYVEAHREDHVRKALQGLRHVYHSKPIRLVP 140
Query: 56 IREMTDVLAVESKAIDLSR-DTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQA 114
I+EM D ++V K + + + D+WVRM+ G YKGDLA+V+DV+ + TVKL+PRID Q
Sbjct: 141 IKEMVDSISVVQKEVAVVKVDSWVRMRTGVYKGDLAQVIDVNYADNQCTVKLVPRIDYQH 200
Query: 115 LANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVER-RRDPMTGDYFENIGGML-FKDG 172
LA+K G + K PP R + EA+ ++ +E+ R D D + + G KDG
Sbjct: 201 LADKEAGVKGKPKSQVRPPARPFSESEAKRFNLPLEKGRLDRAFHDVVDILCGTTKIKDG 260
Query: 173 FLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKG--------HF 224
+ KT S+ ++ PT DEL++F GE+ +++ + + A K F
Sbjct: 261 YHLKTCSLATVKLSET-PTLDELQRFAV-GEDVDTEGGAANGALAALSKAVGARKTDLKF 318
Query: 225 MKGDAVIVIKGDLKNLKGWVEKVDEE-NVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVK 283
M GD V++++GDL+NL+G VE+VD + V + P K L + L E + + G+ V+
Sbjct: 319 MTGDQVLIVEGDLRNLEGVVERVDPDGRVVVMPSHKELNELLTFKP-EQHEALQTGSTVR 377
Query: 284 VVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDL 343
V+ G G GMV+KV++ V I S + E+ +VF S TT
Sbjct: 378 VLHGKHEGVVGMVVKVDRDVAHIFSTVSNEEFQVFNARSRRHSLCTT------------W 425
Query: 344 VLLDNNSFGVIIRVESEAFQVL--KGVPDRPEVALVKLREIKCKLEKKS-NVQDRNKNTV 400
+ V+ RVE + V+ G DRPE+ VKL ++K KL ++ + QD + +T+
Sbjct: 426 LCWTVTKLAVLSRVEKDVAFVMTNAGTSDRPEIKPVKLHDLKKKLFSRNISAQDAHMDTI 485
Query: 401 AVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGD 460
+VRI++G K G VEHIY+ L + H EH G +C +S +CV GG++ +
Sbjct: 486 DQGSMVRIIDGKYKDATGTVEHIYKVRLI--EPHVQEHGGIVCIRSRNCVAHGGNKGSQI 543
Query: 461 RNGDAYSRFNSLRTPPRIPQSPGRYS------RGGPPAGGRN----------RGGRG-GH 503
G A ++ PP+ P S RG A G GGRG G
Sbjct: 544 GGGVAAQMMSASGLPPKSPAHALLASSFTSGLRGDLMAQGNQAPRAMPMRAFAGGRGRGR 603
Query: 504 DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRD 563
D L+G T K+R G YKGY GR++DV +VR+EL++Q + +TV+R + V ++ RD
Sbjct: 604 DPLIGQTKKIRSGVYKGYVGRIIDVTDSTVRMELQAQARTITVNREHLDVPQVAAS--RD 661
Query: 564 T-----PRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNP-YTPMS 617
+ P G + P +RTP H TP R G TP+H M TP R+ AWNP TP
Sbjct: 662 SFLSRPPPSGF--DAPW--ARTPAHYPQTPARAGGMTPMHGAM-TPAREAAWNPQQTPAH 716
Query: 618 PPRDNWEDGNPGS-WGTSPQYQPGS-PPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSS 675
P + G+ WG++ Y PG S A PTPG+G+ TPG +Y+ A
Sbjct: 717 MPSEWQPTSTAGTGWGSATGYTPGGFGDSAALAGPTPGAGYGVTPGADYTGA-------- 768
Query: 676 TYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFM 735
TPGG +TP P + A ++ F+
Sbjct: 769 ------------TPGGYGITPGGYD--------APRVEDPVPVPAAPVAAWPEDYMGRFI 808
Query: 736 PDILVRRSGEESVVGVIREVLPDGSC-RVVLGSSGNGDTI-------------TALPNEI 781
P ++VR S G + V P GS +V +G+ D + T +E+
Sbjct: 809 PGVVVRLS--SGAQGYVTSVGPGGSTFQVKIGTVRVRDGVEVLETVPKTAQEETVTEDEL 866
Query: 782 EIVPPRKTDKIKIMG---GPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAK 834
EIV P ++ ++ G +RG TG+LI +DG DG++++D S DV ILDMA LA+
Sbjct: 867 EIVKPENKSRVIVVTAAEGANRGETGRLISIDGVDGVLRLDSSSDVVILDMACLAR 922
>gi|242016949|ref|XP_002428957.1| transcription elongation factor SPT5, putative [Pediculus humanus
corporis]
gi|212513786|gb|EEB16219.1| transcription elongation factor SPT5, putative [Pediculus humanus
corporis]
Length = 1122
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 290/886 (32%), Positives = 455/886 (51%), Gaps = 89/886 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
LQI+SV+A + +K YIYIEA K+ HVK A + N+ + K +VPI+EMTDVL V +
Sbjct: 261 LQIKSVVAPEGIKGYIYIEAFKQPHVKAAINNIGNLRMGAWKQQMVPIKEMTDVLRVVKE 320
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L + WVR+K G+YK D+A+V VD + +V +KL+PRID L L E
Sbjct: 321 QTGLKKKQWVRLKRGHYKDDIAQVDYVDLAQNQVHLKLLPRIDYSRLRGALRTQQSENEA 380
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+ +K+ PP + + + R + V GD+ G + GFLYK +M +I
Sbjct: 381 LKRKRKRRPPAKPFDPEAIRAVGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTMSAI 435
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGW 243
A ++P+ ELEKF E + ++ + +TL + F GD VIV +G+LK+L+G
Sbjct: 436 VADGVKPSLSELEKFEEAPEGIDIELPTTNTLKDDSTSHSFSTGDNVIVCEGELKHLQGK 495
Query: 244 VEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHV 303
+ +D + ++P+ + L + + EL K+F G+HVKV+SG G TG+++++E++
Sbjct: 496 IISIDGNLIMVQPKHEVLKDPIEFPANELEKHFRRGDHVKVLSGRYEGDTGLIVRIEENR 555
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQ 363
++ SD T ++ V D+ S++ TG+ +G ++ DLV LD + GVI+R+E + F
Sbjct: 556 AVLFSDLTMHELEVLPRDLQLCSDMATGVDSMGQFQWGDLVQLDPQTVGVIVRLERDNFH 615
Query: 364 VL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
VL K V +P+ AL K +E+ +++ D +N + VKD+V +++G G+ G
Sbjct: 616 VLSMHGKVVQAKPQ-ALQKKKEL-----RRAVALDSEENNIQVKDIVDVIDGLHSGRSGE 669
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIP 479
++H+YR F+H R ++++ G K+ + GG+R+N S F+ PRI
Sbjct: 670 IKHLYRRFAFLHSRMYIDNGGIFVCKTRHLQLAGGNRSNPMAPLGNQSPFHGGFMSPRIA 729
Query: 480 QSPGRYSRGGPPAGG-----------RNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDV 528
SP ++ GG GG +NR G ++G T+K+ GPYKG G V D
Sbjct: 730 ASPRHHAGGGGGGGGGGGDRGRGGRMKNRFGVRRDRDIIGQTIKITGGPYKGNVGIVKDA 789
Query: 529 KGQSVRVELESQMKVVTVDRSMISDNVVVS-----TPYRDTPRYGMGSETPMHPS--RTP 581
+ RVEL S + ++VDRS I+ V S + Y TP + G TPM+ + +TP
Sbjct: 790 TDCTARVELHSSCQTISVDRSHIASIGVPSKDGSISTYNRTPSF--GGATPMYAAGQKTP 847
Query: 582 LHPYMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDN-WEDGNPGSWGT 633
+H TPM + G+ TP HDG RTP + AW+ +P R N +E +
Sbjct: 848 MHGPQTPMYEPGSRTPYGSMTPSHDGSRTPGQSGAWDANVANTPARSNDFEVYSLDEASP 907
Query: 634 SPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD------SSSTYVNAPSP---Y 684
SP Y P +P +A TP + + G ++S + +Y + PSP Y
Sbjct: 908 SPGYNPSTPGYQAGGPYTPQTPGGTMYGSDHSYSPYQPSPSPSGFQGGSYSSTPSPSGGY 967
Query: 685 LPSTPGGQPM--TPNSASYLPGTPGG-------QPMTPGTGGLDAMSPVIGADNEGPWFM 735
PS P G P+ TP S Y P TPG P TPG GLD +PV W
Sbjct: 968 TPS-PSGAPLYATP-SLQYSPMTPGSGSAPSPYNPHTPGA-GLD--TPV------QDWQT 1016
Query: 736 PDILVR------RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKT 789
DI VR G G+IR + G+C V L + + + +E V P++
Sbjct: 1017 TDIEVRIRDTHDDPGLSGQTGIIRSIT-GGTCSVYLPDEER--VVNIIGDHLEPVIPQRG 1073
Query: 790 DKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
D++K++ G R A G+L+ +D +G+VK++ V++L + L K+
Sbjct: 1074 DQVKVIMGEFREAVGQLLSIDNQEGVVKLNQD-QVQMLQLRFLCKM 1118
>gi|332029065|gb|EGI69079.1| Transcription elongation factor SPT5 [Acromyrmex echinatior]
Length = 1142
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 304/907 (33%), Positives = 455/907 (50%), Gaps = 124/907 (13%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+SV+A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V +
Sbjct: 272 LQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKE 331
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V VD + +V +KL+PRID L E
Sbjct: 332 QTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSESEA 391
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+ +KK PP + + + R + V GD+ G + GFLYK + +I
Sbjct: 392 LKRKKKRRPPAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTTSAI 446
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-----FMKGDAVIVIKGDLK 238
A+ ++PT ELE+F E E D++ + K+ F GD V V +G+L
Sbjct: 447 IAEGVKPTLSELERFEEAPEGVEIDLSGTPGTGTSGKEDQSVAHSFSNGDNVEVCEGELV 506
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
NL+G + +D + + P+ + L + L + EL KYF G+HVKVV+G G TG++++
Sbjct: 507 NLQGKIVSIDGNMIMVMPKHEELKEALEFQASELRKYFTQGDHVKVVAGRYEGDTGLIVR 566
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
VEQ+ +++ SD + ++ V D+ S++ TG+ +G ++ DLV LD + GVI+R+E
Sbjct: 567 VEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIVRLE 626
Query: 359 SEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCK 414
E F VL K V RP+ L K RE + + D +NT+ KD+V++V+GP
Sbjct: 627 RENFHVLSMHGKVVEARPQ-GLTKRRE-----NRNAVALDSQQNTIQKKDIVKVVDGPHA 680
Query: 415 GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT 474
G+ G ++H+YR F+H R +++ G K+ + GG++ + + F S
Sbjct: 681 GRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKTTSINSMSPVAGFMS--- 737
Query: 475 PPRI--PQSPGRYSRGGPPAGGRNRGGRGGHDA-----LVGTTVKVRLGPYKGYRGRVVD 527
PRI P P G GGR RG GG A L+GTT+K+ GPYKG G V D
Sbjct: 738 -PRIASPMHPSGGGFGRGGGGGRGRGRGGGGGARRDRELIGTTIKITGGPYKGNVGIVKD 796
Query: 528 VKGQSVRVELESQMKVVTVDRSMISDNVVVS-----TPYRDTPRYGMGSETPMHP---SR 579
+ RVEL S + ++VDRS I++ V S + Y TP YG G +TPM+ S+
Sbjct: 797 ATETTARVELHSTCQTISVDRSHIANVGVPSKDGGFSSYNRTPAYGAGGQTPMYARDGSK 856
Query: 580 TPLHPYMTPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDG----- 626
TP+H TPM + G+ TP HDG RTP + AW+P +P R N DG
Sbjct: 857 TPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPTVTNTPARTNDFDGYSMEE 916
Query: 627 --------------------NPGSWGTSPQ----YQPG-SPPSRAYEAPTPGSGWASTPG 661
PG+ S Q YQP SP A +P+P +G+ +TP
Sbjct: 917 GGSPGYGPGYPPTGGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSP-AGYVATP- 974
Query: 662 GNYSDAGTPRDSSSTYVNAPSPYL--PSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLD 719
+P S + Y +P PS G PMTP +PG+P P TPG+ G+D
Sbjct: 975 -------SP--SGTGYTTSPHGAFATPSPLGYSPMTPG----IPGSP-YNPQTPGS-GID 1019
Query: 720 A--MSPVIGADNEGPWFMPDILVR---------RSGEESVVGVIREVLPDGSCRVVLGSS 768
A S +IG W DI VR +G+++V+ I G C V L +
Sbjct: 1020 AGVGSGIIGNSE---WHTTDIEVRIRDSHDDPALAGQQAVIRGIS----GGMCTVYLPTE 1072
Query: 769 GNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILD 828
+ + ++E V P + D++K++ G R A G L+ +D +G+VK++ ++K L
Sbjct: 1073 DR--VVNLVCEQLEPVVPSRGDRVKVILGEDREAVGTLLSIDNQEGVVKLNTD-EIKFLQ 1129
Query: 829 MAILAKL 835
+ L K+
Sbjct: 1130 LRFLCKM 1136
>gi|326516394|dbj|BAJ92352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 384 bits (986), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/267 (70%), Positives = 222/267 (83%), Gaps = 8/267 (2%)
Query: 572 ETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW 631
ETPMHPSRTPLHP+ TPMRD GATPIHDGMRTPMR RAW PMSPPRDNWEDGNP +W
Sbjct: 1 ETPMHPSRTPLHPFQTPMRDPGATPIHDGMRTPMRSRAW---APMSPPRDNWEDGNPDTW 57
Query: 632 GTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGG 691
G+SP YQPG+PP+R YEAPTPGSGWA+TPG +Y+D TPR+S+ Y NAPSPY+PSTP G
Sbjct: 58 GSSPAYQPGTPPARPYEAPTPGSGWANTPGVSYNDVPTPRESN--YANAPSPYVPSTPVG 115
Query: 692 QPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVR--RSGEESVV 749
QPMTPNSA+YLPGTPGGQPMTPG G+D MSPV+G + EG W +PD+LV +G+E
Sbjct: 116 QPMTPNSAAYLPGTPGGQPMTPGNAGMDIMSPVMGGEGEGNWALPDVLVNVLAAGDEGP- 174
Query: 750 GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGV 809
GV+REVL DG+CRV LGSSGNGD +T LP E+E++ P+K+D+IKIM G RG GKLIG+
Sbjct: 175 GVVREVLGDGTCRVALGSSGNGDIVTVLPTELEVIRPKKSDRIKIMNGTFRGFVGKLIGI 234
Query: 810 DGTDGIVKVDVSLDVKILDMAILAKLA 836
DG+DGIVK+D + +VKILDM ILAKLA
Sbjct: 235 DGSDGIVKLDDTYEVKILDMVILAKLA 261
>gi|194382222|dbj|BAG58866.1| unnamed protein product [Homo sapiens]
Length = 879
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 282/883 (31%), Positives = 437/883 (49%), Gaps = 101/883 (11%)
Query: 29 EADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGD 88
EA+ + + A LR Y + M VPI+EMTDVL V + +L +WVR+K G YK D
Sbjct: 23 EAEVDEERRSAVGNLRLGYWNQQM-VPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDD 81
Query: 89 LAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VAKKKPFV-PPPRFMNVDEARELH 146
+A+V V+ + +++K+IPRID + ++ ++ AK+K F PP R + ++ R L
Sbjct: 82 IAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLG 141
Query: 147 IRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGE 206
V GD+ G + GFL+K+ +M ++ + ++PT ELEKF E +
Sbjct: 142 GDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGID 196
Query: 207 SDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLA 266
++ + ST ++ +F GD V V +G+L NL+G + VD + I P+ + L L
Sbjct: 197 LEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLE 254
Query: 267 VNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESS 326
++EL KYF+ G+HVKV++G G TG++++VE++ +I+ SD T +++V D+ S
Sbjct: 255 FPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCS 314
Query: 327 EVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKL 386
E +G+ G +E +LV LD + GVI+R+E E FQVL +V V+ + + K
Sbjct: 315 ETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMY---GKVVTVRHQAVTRKK 371
Query: 387 EKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAK 445
+ + V D +N + VKD+V++++GP G++G + H++R F+H + +E+ G K
Sbjct: 372 DNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCK 431
Query: 446 SSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGH-- 503
+ V+ GGS+ N P SP S P AGG+ G
Sbjct: 432 TRHLVLAGGSKPRDVTN---------FTVGGFAPMSPRISSPMHPSAGGQRGGFGSPGGG 482
Query: 504 ------------DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI 551
+ L+G TV++ GPYKGY G V D + RVEL S + ++VDR +
Sbjct: 483 SGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRL 542
Query: 552 S----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHD 599
+ + TP TP YG GS TPM+ S+TPL TP+HD
Sbjct: 543 TTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHD 602
Query: 600 GMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG-----------------T 633
G RTP + AW+P P +P R D+ +P ++G
Sbjct: 603 GSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQV 662
Query: 634 SPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPY 684
+PQY P +P + A Y AP+P + +P P + ++P+ Y
Sbjct: 663 NPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASY 722
Query: 685 LPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD-NEGPWFMPDILV 740
P TP PM AS P G PMTPG GG + +P G + N W DI V
Sbjct: 723 HP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNSSDWVTTDIQV 778
Query: 741 RRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKI 794
+ + VV GVIR V G C V L S +I++ +E + P K +K+K+
Sbjct: 779 KVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPITPTKNNKVKV 835
Query: 795 MGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
+ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 836 ILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 878
>gi|390478988|ref|XP_002762163.2| PREDICTED: transcription elongation factor SPT5 [Callithrix jacchus]
Length = 1074
Score = 381 bits (978), Expect = e-102, Method: Compositional matrix adjust.
Identities = 293/892 (32%), Positives = 454/892 (50%), Gaps = 93/892 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K++PRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMVPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G I
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGRFA-I 616
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
G+ + H A+ ++ ++ G+ + + F P SP
Sbjct: 617 SPGVAV--SPKQIRHCYQKEAEVATRQILAGAVPTWRHSPRDVTNFT---VGGFAPMSPR 671
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 672 ISSPMHPSAGGQRGGFGSPGGSSGSMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 731
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 732 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 791
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 792 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 851
Query: 629 GSWGTSPQYQ-PGSP-PSR-----AYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAP 681
++G +P Q PG P PS Y TPG TP +D +P S V +
Sbjct: 852 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPG-----TPAMYNTDQFSPY--SYRQVASK 904
Query: 682 SPYLPSTPGGQPMTPNS------ASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD-NEG 731
LP P P TP + AS P G PMTPG GG + +P G + N
Sbjct: 905 PSMLPEQPTPGPATPYTSDMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNSS 964
Query: 732 PWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVP 785
W DI V+ + VV GVIR V G C V L S +I++ +E +
Sbjct: 965 DWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPIT 1021
Query: 786 PRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 1022 PTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 1073
>gi|395526018|ref|XP_003765172.1| PREDICTED: transcription elongation factor SPT5 [Sarcophilus
harrisii]
Length = 982
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 288/902 (31%), Positives = 452/902 (50%), Gaps = 146/902 (16%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 151 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 208
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 209 KEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 268
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 269 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 323
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 324 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 381
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 382 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 441
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T ++ V E+ +V N +G ++ V +A V
Sbjct: 442 ILFSDLTMHEV-----GVRETFQVL-------------------NMYGKVVTVRHQA--V 475
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIY 424
+ +R VAL D +N + VKD+V++++GP G++G + H++
Sbjct: 476 TRKKDNRFAVAL-----------------DSEQNNIHVKDIVKVIDGPHSGREGEIRHLF 518
Query: 425 RGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGR 484
RG F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 519 RGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPRI 569
Query: 485 YSRGGPPAGGRNRGGRGGH------------DALVGTTVKVRLGPYKGYRGRVVDVKGQS 532
S P AGG+ G + L+G TV++ GPYKGY G V D +
Sbjct: 570 SSPMHPSAGGQRGGFGSAGGGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATEST 629
Query: 533 VRVELESQMKVVTVDRSMISDNVV-----VSTPYRDTPRYG-------MGSETPMHPSRT 580
RVEL S + ++VDR ++ +++ Y TP YG GS TPM+ S+T
Sbjct: 630 ARVELHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYVQGSRTPMYSSQT 689
Query: 581 PLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSW 631
PLH +P TP+HDG RTP + AW+P P +P R D+ +P ++
Sbjct: 690 PLHDGESPHY-GSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAY 748
Query: 632 GTSP-----------------QYQPGSPPSRA---------YEAPTPGSGWASTPGGNYS 665
G +P QY P +P + A Y AP+P + +P +
Sbjct: 749 GGTPNPQTPGYPDPSSPQVNAQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPQSYHQ 808
Query: 666 DAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMS 722
A +P +T+ +P+ Y P TP PM AS P G PMTPG GG + +
Sbjct: 809 VAPSPAGYQNTH--SPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHT 862
Query: 723 PVIGAD-NEGPWFMPDIL--VRRSGEESVV----GVIREVLPDGSCRVVLGSSGNGDTIT 775
P G + N W DI VR + +S V GVIR V G C V L S +I+
Sbjct: 863 PGSGIEQNSSDWVTTDIQVKVRDTYLDSQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSIS 921
Query: 776 ALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+ +E + P K++K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL
Sbjct: 922 S--EHLEPITPTKSNKVKVILGEDREATGDLLSIDGEDGIVRMDLDEQLKILNLRFLGKL 979
Query: 836 AQ 837
+
Sbjct: 980 LE 981
>gi|391330049|ref|XP_003739477.1| PREDICTED: transcription elongation factor SPT5-like [Metaseiulus
occidentalis]
Length = 1046
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 296/876 (33%), Positives = 434/876 (49%), Gaps = 105/876 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQIRSV+A + +K YIYIEA K H+K A G+ + Y Q +V I+EMT+VL V
Sbjct: 208 LQIRSVVAPEGVKGYIYIEAFKHTHIKAAIDGVGTLKMGNYEQ--TMVAIKEMTEVLRVT 265
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE-GREVA 125
+ LSR WVR+K G YK DLA+V V+ + +V + +IPRID + L+ E
Sbjct: 266 KQQPTLSRGQWVRLKRGVYKDDLAQVYHVEQAQNKVELMMIPRIDYTKMRGALKSASESE 325
Query: 126 KKKPFVPP-PRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
KK+ F P R +V+ R + V GD+ G + GFLYK ++ +I
Sbjct: 326 KKRKFKRPVQRAFDVEAIRSIGGEVS-----TDGDFLIFEGQRYSRKGFLYKAFNINAIL 380
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
I+PT +EL+KF EN E D+ S ++ HF GD VIV +GDL NLKG V
Sbjct: 381 TDGIKPTLEELQKFDEQPENLEIDLGEKSGSLDVKE--HFAPGDNVIVPEGDLVNLKGKV 438
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD V I P+ L + ++ EL K+F+ G+HVKV++G TGM+++V+ +
Sbjct: 439 ITVDGTKVTILPKHDELNDPIEFHAHELKKFFKSGDHVKVLNGRHENDTGMIIRVDSGIA 498
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+LSD T E+++V D+ ++ TG+ G Y+ DLV LD + GVI+R+E E FQ+
Sbjct: 499 ILLSDLTSEELKVRTKDLQLCADTATGVDSFGQYQYGDLVQLDAQTVGVIVRLEKENFQI 558
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V VK ++I K+E K V D +N + VKD+V+ ++GP G++G V+HI
Sbjct: 559 LSQT---GKVLSVKYQKITRKVESKKAVALDSEQNDIHVKDIVKAIDGPHCGRKGEVKHI 615
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLR---TPPRIPQ 480
+R F+H R E+ G K+ V+ G +G +G A F+ L + P P
Sbjct: 616 FRIHAFLHSRLVTENGGMFVCKTRHLVLAGNKVHSGSSSGLAMGGFSPLSPRISSPMHPS 675
Query: 481 SPGRYSRGGP------PAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
+ G+ P GG ++G R H L+G T+K+ GPYKG+ G V D + R
Sbjct: 676 AEGKSPMRSPMHAGGHGRGGAHQGKRDFH--LIGKTIKIIKGPYKGHIGMVKDATTSTAR 733
Query: 535 VELESQMKVVTVDRSMISDNVVVS-------TPYRDTPRYG-----MGSETPMHPSRTPL 582
VEL ++ + +TVDR+ + VS + Y TP +G G++TP+H SRTP+
Sbjct: 734 VELHAKCQTITVDRTRLEPATKVSGRASGGASSYTRTPSHGNATPMYGNQTPIHGSRTPM 793
Query: 583 HPYMTPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTS 634
TPM + G+ TP HDG RTP +W+ + +P R E+ + S
Sbjct: 794 QGSQTPMYEPGSRTPHYGNETPRHDGSRTPSHSTSWDHVS--TPARS--EEFDEYEHEPS 849
Query: 635 PQYQPGSPPSRAYEAPTPGSG---WASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGG 691
P Y P +P Y+ TP G TPGG YS P + S G
Sbjct: 850 PSYNPATP---GYQPDTPQVGGPFTPQTPGGMYSSHEAPFSPYQASPSPSSSSYQLPSPG 906
Query: 692 QPMT---------PNSASYLPGTPG------GQPMTPGTGGLDAMSPVIGADNEGPWFMP 736
P+T PNS + P TPG P TPG GG+D M P+ W
Sbjct: 907 NPLTTPSPMGYNNPNSQFFSPMTPGVAASPFNNPQTPG-GGMDHM-PM-------EWQAV 957
Query: 737 DILVR-RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNE---------IEIVPP 786
D+ R R+ E G++ G ++ G SGN ++ + + +E V P
Sbjct: 958 DLECRIRALENKDKGLV------GQQCIITGISGNVCSVLLIKEDRVISVDSHYLEPVRP 1011
Query: 787 RKTDKIKIM--GGPHRGATGKLIGVDGTDGIVKVDV 820
R+ ++ KI+ GG G GV+ ++ V V
Sbjct: 1012 RENERCKIISEGGEEEGIAA---GVNTGTSVIVVSV 1044
>gi|357438259|ref|XP_003589405.1| Global transcription factor group [Medicago truncatula]
gi|355478453|gb|AES59656.1| Global transcription factor group [Medicago truncatula]
Length = 359
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/251 (77%), Positives = 212/251 (84%), Gaps = 19/251 (7%)
Query: 604 PMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGN 663
PMRDRAWNPYTPMSPPRDNWEDGNPGSWG +P YQPGSPPS+ YEAPTPG+GWAST GGN
Sbjct: 112 PMRDRAWNPYTPMSPPRDNWEDGNPGSWGANPHYQPGSPPSQPYEAPTPGAGWASTSGGN 171
Query: 664 YSDAGTPRDSSSTYV--------------NAPSPYLPSTPGGQPMTPNSASYLPGTPGGQ 709
YS+AGTPRDSS+ YV NAPSPYLPSTP GQPMTP+SASYLPGTPGGQ
Sbjct: 172 YSEAGTPRDSSA-YVFTNSIWTDADCITTNAPSPYLPSTP-GQPMTPSSASYLPGTPGGQ 229
Query: 710 PMTPGTGGLDAMSPVIGADNEGPWFMPDIL--VRRSGEESVVGVIREVLPDGSCRVVLGS 767
PMTPG GGLD MSPV+G DNEGP FMPDIL V R+ EES VGVI+EVLPDGS RV LGS
Sbjct: 230 PMTPGIGGLDVMSPVLGGDNEGPSFMPDILVNVHRTREES-VGVIKEVLPDGSYRVALGS 288
Query: 768 SGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKIL 827
SGNG+TI+AL NE+E V PRK+DKIKI+GG RG+TGKLIGVDGTDGIVKVD +LDVKIL
Sbjct: 289 SGNGETISALSNEVEAVVPRKSDKIKIIGGELRGSTGKLIGVDGTDGIVKVDDTLDVKIL 348
Query: 828 DMAILAKLAQP 838
D+ IL KLAQP
Sbjct: 349 DLVILVKLAQP 359
>gi|444732088|gb|ELW72407.1| Transcription elongation factor SPT5 [Tupaia chinensis]
Length = 1243
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 301/1012 (29%), Positives = 470/1012 (46%), Gaps = 213/1012 (21%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 259 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 316
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 317 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 376
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 377 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 431
Query: 185 AQNIQPTFDELEKFR-----------------------TPGENGE--------------- 206
+ ++PT ELEKF PG+N E
Sbjct: 432 TEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGDNVEVCEGELINLQGKILS 491
Query: 207 ------------SDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHI 254
D+ + A + +F GD V VI G + G + +V+E V +
Sbjct: 492 VDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVIL 551
Query: 255 RP-----EMKGLPKTLAVNS---------------------------------------- 269
E+K LP+ L + S
Sbjct: 552 FSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQDML 611
Query: 270 ----KELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVES 325
+EL KYF+ G+HVKV++G G TG++++VE++ +I+ SD T +++V D+
Sbjct: 612 EFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLC 671
Query: 326 SEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCK 385
SE +G+ G +E +LV LD + GVI+R+E E FQVL +V V+ + + K
Sbjct: 672 SETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMY---GKVVTVRHQAVTRK 728
Query: 386 LEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICA 444
+ + V D +N + VKD+V++++GP G++G + HI+R F+H + +E+ G
Sbjct: 729 KDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHIFRSFAFLHCKKLVENGGMFVC 788
Query: 445 KSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGH- 503
++ V+ GGS+ N P SP S P AGG+ G
Sbjct: 789 RTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPRISSPMHPSAGGQRGGFGSPGG 839
Query: 504 ------------DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI 551
+ L+G TV++ GPYKGY G V D + RVEL S + ++VDR +
Sbjct: 840 GGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRL 899
Query: 552 SD------------NVVVSTPYRDTPRYGMGSETPMH--PSRTPLHPYMTPMRD------ 591
+ +++ Y TP Y GS+TPM+ SRTP++ TP++D
Sbjct: 900 TTVYGRGRGRGSRRPGGMTSTYGRTPMY--GSQTPMYGSGSRTPMYGSQTPLQDGSRTPH 957
Query: 592 -AGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNPGSWG--------- 632
TP+HDG RTP + AW+P P +P R D+ +P ++G
Sbjct: 958 YGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTPG 1017
Query: 633 --------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSSS 675
+PQY P +P + A Y AP+P + +P P +
Sbjct: 1018 YPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGY 1077
Query: 676 TYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLDAMSPVIGAD-NEG 731
++P+ Y P TP PM AS P G PMTPG GG + +P G + N
Sbjct: 1078 QNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNSS 1133
Query: 732 PWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVP 785
W DI V+ + VV GVIR V G C V L S +I++ +E +
Sbjct: 1134 DWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDSEKVVSISS--EHLEPIT 1190
Query: 786 PRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL++ L KL +
Sbjct: 1191 PTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLE 1242
>gi|340371489|ref|XP_003384278.1| PREDICTED: transcription elongation factor SPT5-like [Amphimedon
queenslandica]
Length = 979
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 288/882 (32%), Positives = 438/882 (49%), Gaps = 112/882 (12%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK--VMLVPIREMTDVLAV--E 66
L I+S A++ L YIY+E+ K+ HVK+A + + N+ K M+VP+ EMTDVL V +
Sbjct: 149 LLIKSATAVEGLHGYIYVESYKQQHVKQAIEDIGNLAMGKWNQMMVPVNEMTDVLRVVKD 208
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE--- 123
S + +L + +WVR+K G Y+ D+A+V VD R +V +K++PR+D + L+G +
Sbjct: 209 SASRNLRQGSWVRIKRGIYRDDIAQVDYVDTSRNKVVLKMLPRVDYTSKKGALKGTDDDA 268
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
K++ PP + + + REL + D + FE G F++GF+YK M +I
Sbjct: 269 NRKRRKSRPPAKLFDPEAIRELGGLISYDGDFLV---FE---GNHFRNGFMYKQFGMNAI 322
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGW 243
+ ++PT ELEKF E E +++ + A GD V V +GDL +L+G
Sbjct: 323 IFEGVKPTLGELEKFEATPEEVEVEVSGSAIGAAG-----LEPGDLVEVCEGDLMHLQGS 377
Query: 244 VEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHV 303
V +D NV + P+ + L L N EL K+F+ G+HVKV++G G TG+V+++E ++
Sbjct: 378 VISIDGNNVTVLPKHEDLRDPLEFNISELRKFFQVGDHVKVIAGRHEGETGLVVRIENNL 437
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQ 363
II D T +++V D+ E ++G+ G ++L DLV+LD + GVI R+E E F+
Sbjct: 438 AIIFVDLTMHELKVRPRDLQLCLEKSSGVDTSGHFQLGDLVMLDQQTVGVITRMEKEVFK 497
Query: 364 VL--KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVE 421
VL G + V+LR+ + D ++N+++ KD+VR+V+G GKQG V+
Sbjct: 498 VLTQHGKEQSVKQHSVQLRKTRAV------ALDSHQNSISAKDIVRVVKGTHIGKQGEVK 551
Query: 422 HIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQS 481
H+Y+G +FIH R+ +E+ G I +S + G + N A + F S R P
Sbjct: 552 HVYKGYVFIHARNVMENGGVIVTRSKDLELAGST-----SNAQALTGFQSPRLASPSPHR 606
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G RGG GG +L+G TVK+ GPYKGY G V D + RVEL ++
Sbjct: 607 GGGRGRGGRGGGGGGGRFNTRDTSLIGKTVKIIQGPYKGYVGIVKDCTDSTARVELHTKC 666
Query: 542 KVVTVDRSMIS-----DNVVVSTPYRDTPRYGM--------------GSETPMHPSRTPL 582
+ + VD++ +S ++ + + + TP++G G TP++ S TP
Sbjct: 667 QTINVDKTRLSVITGQESAGMMSSWGRTPQFGAATPAYGNMTPLPGGGGRTPLYGSMTPS 726
Query: 583 HP-------------YMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR-DNWEDGNP 628
H YMTP D TP+H G AW+P +P R D W +
Sbjct: 727 HSGDGGRTPSYNNPGYMTPSHDPSRTPLHGG-------SAWDPSITNTPARTDEWTNYGS 779
Query: 629 GSWGTSPQYQPGSPPSRAYEAP-TPGSGWASTPGGN-------YSDAGTPRDSSS-TYVN 679
+ P +P S Y+ P TP + A +P N + A TP SS Y
Sbjct: 780 APSPSGTYANPATPGSVQYDNPSTPSAYIADSPQSNSSSHYGSHYSARTPMYSSDYKYTP 839
Query: 680 APSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDI- 738
+P+ Y P TPG ++ Y P TP G P+ G G F PDI
Sbjct: 840 SPTNYNPMTPG------SNLEYSPRTP-GSPLDTGDLG----------------FPPDIE 876
Query: 739 -----LVRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIK 793
L S VGVI+ + RV + +G + + + VPP K DKIK
Sbjct: 877 VMVKDLYHDSSLAGKVGVIKSAV---GGRVSVYLYDDGQDVDIPMSFLTHVPPMKGDKIK 933
Query: 794 IMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+ G H G TG L+ +D DGIVK+D +KI+ + LAKL
Sbjct: 934 CIKGVHTGNTGYLMNIDEGDGIVKLDSDGSLKIITLNELAKL 975
>gi|392344064|ref|XP_003748857.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor SPT5
[Rattus norvegicus]
Length = 1137
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 286/908 (31%), Positives = 453/908 (49%), Gaps = 120/908 (13%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 268 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 325
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 326 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 385
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 386 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 440
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G V
Sbjct: 441 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKV 498
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 499 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 558
Query: 305 IILSDTTKEDIRVF---------------ADDVVESSEVTTGITKIGDYELRDLVLLDNN 349
I+ SD T +++V D ++ T+ I L VL N
Sbjct: 559 ILFSDLTMHELKVLPRKKKKKKKKKEKKKRKDGERTAHFTSPSLLILCILLPPKVL---N 615
Query: 350 SFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIV 409
G ++ V +A V + +R VAL D ++N + VKD+V+++
Sbjct: 616 MHGKVVTVRHQA--VTQKKDNRFAVAL-----------------DSDQNNIHVKDIVKVI 656
Query: 410 EGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD--AYS 467
+GP G++G + H+YR F+H + +E+ G K+ V+ GGS+ N ++
Sbjct: 657 DGPHSGREGEIRHLYRSFAFLHCKKLVENGGMFVCKARHLVLAGGSKPRDVTNLTVGGFT 716
Query: 468 RFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVD 527
+ + P P + G++ G P G GR ++ L+G TV++ GPYKGY G V D
Sbjct: 717 PMSPRISSPMHPSAEGQHGGFGSPGGMSRGRGRRDNE-LIGQTVRISQGPYKGYIGVVKD 775
Query: 528 VKGQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPM 575
+ RVEL S + ++VDR ++ + TP TP YG GS TPM
Sbjct: 776 ATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGSGSRTPM 835
Query: 576 HPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDG 626
+ S+TPL TP+HDG RTP + AW+P P +P R D+
Sbjct: 836 YGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTP 895
Query: 627 NPGSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTP 660
+P ++G +PQY P +P + A Y AP+P + +P
Sbjct: 896 SPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSP 955
Query: 661 GGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GG 717
P + ++P+ Y P TP PM AS P G PMTPG GG
Sbjct: 956 SPQSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGG 1011
Query: 718 LDAMSPVIGAD-NEGPWFMPDILVRRSG---EESVV---GVIREVLPDGSCRVVLGSSGN 770
+ +P G + N W DI V+ + +V GVIR V G C V L S
Sbjct: 1012 YNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQIVGQTGVIRSVT-GGMCSVYLKDSEK 1070
Query: 771 GDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVS-LDVKILDM 829
+I++ +E + P K +K+K++ G R ATG L+ +DG DGI+++D+ +KIL++
Sbjct: 1071 VVSISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDLEDQQIKILNL 1128
Query: 830 AILAKLAQ 837
L KL +
Sbjct: 1129 RFLGKLLE 1136
>gi|428167670|gb|EKX36625.1| hypothetical protein GUITHDRAFT_117170 [Guillardia theta CCMP2712]
Length = 1042
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 297/889 (33%), Positives = 440/889 (49%), Gaps = 106/889 (11%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
+G + I + YIY+EA KEA VKEA GLR +Y+ K+ LVP++EMTD + +
Sbjct: 192 EGKPIHITCAYWNEQSLGYIYVEAYKEAFVKEALSGLRGVYATKMKLVPVKEMTDTVVII 251
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAK 126
K++ W R++ G YKGD+ +V+ V++ R V VKL+PR+D + + +
Sbjct: 252 KKSLSAQPGGWARVRRGKYKGDIVQVLAVEHNRNEVEVKLVPRVDTNDYSAFDDSEAKKR 311
Query: 127 KKPFVPPPRFMNVDEARELHIR---VERRRDPMTGDYFENIGG--MLFKDGFLYKTVSMK 181
+ F+PP R N D E + +E RD +GD + G GF+ K ++K
Sbjct: 312 RSKFIPPRRLFNPDNYGESDLDKWGIENHRDQSSGDNVYTVDGDFTFTGGGFVKKWFAVK 371
Query: 182 SIS-AQNIQPTFDELEKFRTPG--ENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLK 238
S++ +IQP D+L+ F E+G + + +++K KGD V V +G+L+
Sbjct: 372 SLTLGSDIQPELDDLKIFEQDAKTEDGLPNRSMTHLTSIHKRKVILNKGDVVRVKEGELR 431
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
+L G V+ +D + V IRP + + + L N +EL KYFE G+HVKVV+G +AG TG V++
Sbjct: 432 DLLGDVDSIDGKRVIIRPRHEAIKQKLEFNMEELEKYFEAGDHVKVVNGRRAGVTGTVVR 491
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNN-------SF 351
VE + IL+D +E+I VF+ D+ +++EV++G+ +G + L DLVLL++ S
Sbjct: 492 VEGETIYILTDVNREEILVFSSDLQDTNEVSSGLDVVGAFRLYDLVLLESASSSMTMPSV 551
Query: 352 GVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ---DRNKNTVAVKDVVRI 408
GV++++E + QVL + +R + KKS D + T+A DVVR+
Sbjct: 552 GVVVQLEKDTLQVLDNYG-----KIRAVRPADVQPHKKSATAVALDGEQQTIAQGDVVRV 606
Query: 409 V-EGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGD------- 460
V +GP KGK G V HI+R LF++ +E+AG +S CV++G S+ +
Sbjct: 607 VGDGPMKGKTGTVRHIFRAFLFLYSPARMENAGMFVMRSRQCVLMGQSKHKENDPTNTLG 666
Query: 461 --------RNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVK 512
R GDA PG + A GR RG + G V+
Sbjct: 667 GAASLIPGRMGDAGRGGFPGGMGGAGAMQPGGFR-----AAGRGRGA-----SWEGKRVR 716
Query: 513 VRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSE 572
+ G KG G V + RVEL++ K V V ++ + D V R P + +
Sbjct: 717 IIRGFDKGKVGTVKEETDAICRVELDATHKKVAVKKTDVVDLV---DEKRVIPSHMAIPQ 773
Query: 573 TPM--HPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPY----TPMSPPRDNWEDG 626
TP H P TP +TP HDG +TP NPY TP S PR+ ++
Sbjct: 774 TPSSDHFQAGSQTPAWTP-----STPAHDGSQTP------NPYAEPGTP-STPRNFFDPN 821
Query: 627 NPGS-WGTSPQYQPGSPPS-RAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPY 684
PG+ S + G+P + AY +P Y SS YV P
Sbjct: 822 TPGTPMHDSTSWDAGTPATPGAYASPYEHPAATPATPTAYGGY------SSNYVQTPGAL 875
Query: 685 LPSTP--GGQPMTPNS----ASYLPG--------TP--GGQPMTPGTGGLDAMSPVIGAD 728
P+TP G P TP++ ASY G TP G P TP T G D PV A
Sbjct: 876 NPTTPGEGASPFTPSTPGGYASYGYGQGNWQTGQTPFDQGTPQTPATPGGDF--PVRAAP 933
Query: 729 NEGPWFMPDILVRRSGEESV--VGVIREVL-PDGSCRVVLGSSGNGDTITALPNE-IEIV 784
W + I VR E + GV+ EV PD C+V + G T +P E +E V
Sbjct: 934 QVSNWCLKRIEVRIVSGEFIDRTGVVVEVKGPD--CKVEM----QGGQSTMVPAEDLEAV 987
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILA 833
P+K + I+ G +G+TGKLIG+DG DGIVK+D++ D+KI+DM +LA
Sbjct: 988 VPQKNSSVIILQGELKGSTGKLIGIDGRDGIVKMDLNSDIKIIDMPLLA 1036
>gi|324499705|gb|ADY39881.1| Transcription elongation factor SPT5 [Ascaris suum]
Length = 1223
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 298/928 (32%), Positives = 446/928 (48%), Gaps = 155/928 (16%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
LQI++V+ + LK IY+EA K+ HV A +G+ + S +V +VPI+EM D L V
Sbjct: 345 LQIKTVVVKEGLKGIIYVEALKQTHVAAAIEGISALNSYQVTMVPIKEMCDTLKVVKDIP 404
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ----ALANKLEGREVAK 126
L +VRMK YK DLA+V VD + +KL+PRID AL + E R V
Sbjct: 405 TLKNGMYVRMKRTMYKDDLAQVDWVDIAHNKAYLKLVPRIDYTRMRGALRAQDEPRFVKM 464
Query: 127 KKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQ 186
K+ P R +V+ +E+ V D +T FE G ++ GFLYK + I
Sbjct: 465 KRR--PQARLFDVERIKEIGGEVSTDGDFLT---FE---GNQYRRGFLYKWFPLNVILVD 516
Query: 187 NIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEK 246
++P+ ELEKF+ ++ + ++ + F GD V V G+L NL+G V+
Sbjct: 517 GVKPSLSELEKFQETTDDLKKELEGTR---VKERAYTFAPGDYVEVADGELVNLRGRVQS 573
Query: 247 VDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLII 306
VD E V + P+ + L + L +N+ EL K+F G+HVKV++G G TG++++VE +++I+
Sbjct: 574 VDGEKVVVLPDHEDLKEALTLNAYELRKFFRAGDHVKVINGRYEGDTGLIVRVEDNLVIL 633
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLK 366
LSD T +++V DV ++VTTG+ +G ++ +DLV+LD + G I+R+E E +VL
Sbjct: 634 LSDLTMHELKVLPRDVQLCADVTTGVDSLGQFQYQDLVMLDQQTAGCIVRLEKEYLEVLN 693
Query: 367 GVPDRPEVALVKLREIKCKLEKK-SNVQDRNKNTVAVKDVVRIVEGPC-------KGKQG 418
+V VK + I K + + + D +NT+ V+D V++V+GP + KQG
Sbjct: 694 M---HGKVVRVKPQAIHGKKDSRFAQALDSQQNTIQVRDTVKVVDGPFAPHNDGEEEKQG 750
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTP--- 475
++H++R F+ R H E+ G K +++ G++AN Y+ N L +P
Sbjct: 751 EIKHLFRSYAFVMSRKHTENGGIFVCKPRHLLLI-GAKANARHE---YAVLNRLASPNPF 806
Query: 476 --PRIP--QSP-------GRYSRGGP----------------------PAGGRNRGGRGG 502
PR P Q+P GR RGG P R R
Sbjct: 807 ASPRHPGGQTPGPGNMSSGRSMRGGATPSQHGGSSSAGSLGGGPGGGGPNAQRIRRD--- 863
Query: 503 HDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS---MISD------ 553
+ ++G +V++ GP KGY G V D Q+ RVEL + K ++VDRS MI D
Sbjct: 864 -NQIIGKSVRITQGPLKGYYGIVKDATEQTARVELHTTCKTISVDRSRIQMIGDGTPGGM 922
Query: 554 ----NVVVSTPYRD------------TPRYG-----MGSETPMHPSRTPLHPYMTPMRDA 592
V TP RD TP YG GS+TPMH +TP+H TPM +
Sbjct: 923 AMGATVYGKTPSRDDGRTPMYSGGGKTPMYGSQTPMYGSQTPMHGGQTPMHGSQTPMHEG 982
Query: 593 G-------ATPIHDGMRTPMR-DRAWNPY---TPMSPPRDNWEDGNPGSWGTSPQYQPGS 641
G +TP ++G RTP+ AW+P TP P D+ + P S P PGS
Sbjct: 983 GRTPHYGASTPAYEGGRTPIHSSSAWDPAVTNTPAHPMNDDIQYDEPDSPFNVP--TPGS 1040
Query: 642 --PPSRAYEAPTP-GSGWA-STPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPN 697
P + Y TP G + TPGG Y+D APSPY S +
Sbjct: 1041 LNPQTPGYNPDTPMGQSYTPMTPGGMYAD-----------YTAPSPYSRSNNYDSAAPYS 1089
Query: 698 SA-SYLP--GTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGE------ESV 748
SA SY P G P G P N G W D+++R G
Sbjct: 1090 SAQSYTPAGGAPAGIPQH--------------VLNSGEWLAADMIIRFRGNYEDEELRDQ 1135
Query: 749 VGVIREV-LPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLI 807
G +R V L +G C + S + A ++I V P++ D++K++ G G G L+
Sbjct: 1136 EGTVRSVDLAEGRCTIY--SFEQDREVRAYFDQILPVKPQQGDRVKVIHGDDNGVIGTLV 1193
Query: 808 GVDGTDGIVKVDVSLDVKILDMAILAKL 835
VDGT+ ++K D S D+ + + L ++
Sbjct: 1194 SVDGTEAVIKTD-SNDIVLSHIESLCRM 1220
>gi|417405599|gb|JAA49507.1| Putative rna polymerase ii transcription elongation factor
dsif/supt5h/spt5 [Desmodus rotundus]
Length = 1016
Score = 370 bits (949), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 259/803 (32%), Positives = 405/803 (50%), Gaps = 97/803 (12%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 383 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 440
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 441 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 500
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 501 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 560
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 561 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 617
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GGS+ N P SP
Sbjct: 618 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTN---------FTVGGFAPMSPR 668
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 669 ISSPMHPSAGGQRGGFGSPGGSSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 728
Query: 530 GQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR ++ + TP TP YG GS TPM+
Sbjct: 729 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYG 788
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR---------DNWEDGNP 628
S+TPL TP+HDG RTP + AW+P P +P R D+ +P
Sbjct: 789 SQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSP 848
Query: 629 GSWG-----------------TSPQYQPGSPPSRA---------YEAPTPGSGWASTPGG 662
++G +PQY P +P + A Y AP+P + +P
Sbjct: 849 QAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSP 908
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT---GGLD 719
P + ++P+ Y P TP PM AS P G PMTPG GG +
Sbjct: 909 QSYHQVAPSPAGYQNTHSPASYHP-TPS--PMA-YQASPSPSPVGYSPMTPGAPSPGGYN 964
Query: 720 AMSPVIGAD-NEGPWFMPDILVR 741
+P G + N W DI V+
Sbjct: 965 PHTPGSGIEQNSSDWVTTDIQVK 987
>gi|47216456|emb|CAG02107.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1131
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 291/936 (31%), Positives = 448/936 (47%), Gaps = 136/936 (14%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A DH+K YIY+EA K+ HVK A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 221 LQIKSVVAPDHVKGYIYVEAYKQTHVKSAIEGIGNLRMGLWNQQ--MVPIKEMTDVLKVV 278
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRIDL + K+ ++ A
Sbjct: 279 KEVTNLKPKSWVRLKRGLYKDDIAQVDYVEPSQNTISLKMIPRIDLDRIKAKMSLKDWFA 338
Query: 126 KKKPFVPP-PRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F P R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 339 KRKKFKRPGQRLFDAEKIRSLGGEVSH-----DGDFMIFEGNRYSRKGFLFKSFAMSAVI 393
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLF--------------------ANRKKGHF 224
++PT ELEKF E + ++ + S F ++ +
Sbjct: 394 TDGVKPTLSELEKFEDQPEGLDLEVVTESGDFQTPRGHLGGRSSSHIPAGSTGKEREHNL 453
Query: 225 MKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKV 284
GD V V +G+L NL+G + VD + I P+ + L L + EL KYF G+HVKV
Sbjct: 454 QAGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVKV 513
Query: 285 VSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLV 344
++G G TG++++VE++ +I+ SD T +++V D+ SE +G+ G +E +LV
Sbjct: 514 IAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGELV 573
Query: 345 LLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVK 403
LD + GVI+R+E E FQVL +V V+ + + + + V D +N + VK
Sbjct: 574 QLDPQTVGVIVRLERETFQVLNM---HGKVLTVRHQAVNRRKDNHFAVALDSEQNNIHVK 630
Query: 404 DVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNG 463
D+V++++GP G++G + H++RG F+H + +E+ G K+ V+ GGS+ G R
Sbjct: 631 DIVKVIDGPHSGREGEIRHLFRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKV-GARRP 689
Query: 464 DAYSRFNSLRTPPRIPQSPGR--YSRGG-------------PPAGG-RNRGGRGGHDALV 507
+L P +PGR RGG P GG + GGR D
Sbjct: 690 PVGRLLLALTRVLSAPPAPGRDQLHRGGLRSHEPAHQQPRAPRRGGVSSEGGRRRRDVAR 749
Query: 508 GTTVKVRL----GPY----------KGYRGRVVDVKGQSVRVELESQMK---VVTVDRSM 550
R GP+ +G VD G + + L ++ R
Sbjct: 750 AGAPGQRADRPDGPHLPGSLQRLHRRGEGRHRVDGPGGAA-LHLSDHLRGPPAADHHRHS 808
Query: 551 ISDNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDR 608
+ TP TP YG GS TPM+ S+TPLH TP+HDG RTP +
Sbjct: 809 GMTSAHSRTPMYGSQTPMYGTGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSG 868
Query: 609 AWNPYTPMSPPRDNWE-----DGNP-----GSWGT----------------SPQYQPGSP 642
AW+P P +P R+ E D P G GT +PQY P +P
Sbjct: 869 AWDPSNPNTPSRNEEEYDFGYDDEPSPSPQGYGGTPNPQTPGYPEVPSPQVNPQYNPQTP 928
Query: 643 PSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQP 693
+ A Y AP+P + +P P ++P+ Y P
Sbjct: 929 GTPAMYNTEQYSPYAAPSPQGSYQPSPSPQSYHQVAPSPVGYQNTHSPASYHP------- 981
Query: 694 MTPNSASY----LPGTPGGQPMTPGT---GGLDAMSPVIGADNE---GPWFMPDILVRRS 743
TP+ +Y P G PMTPG GG + +P G++ E W DILVR
Sbjct: 982 -TPSPMAYQVVPAPSPVGYSPMTPGAPSPGGYNPHTP--GSNIEQGSSDWVTTDILVRVK 1038
Query: 744 GE----ESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPH 799
+GVIR V G C V + S +I++ + +E V P K +K+K++ G
Sbjct: 1039 DSFMDLMGQMGVIRSVT-GGMCSVFMQESEKVVSISS--DHLEPVTPTKNNKVKVIMGED 1095
Query: 800 RGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
R ATG L+ +DG DGIV++++ +KIL++ L +L
Sbjct: 1096 REATGILLSIDGDDGIVRMELDDQLKILNLRFLGRL 1131
>gi|393909583|gb|EJD75507.1| micro-fibrillar-associated protein 1 containing protein [Loa loa]
Length = 1069
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 290/889 (32%), Positives = 436/889 (49%), Gaps = 136/889 (15%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESK 68
+ LQI+SV+ + LK IYIEA K++HV A G+ + ++ +VPI+EM D L V
Sbjct: 221 NSLQIKSVVVKEGLKGMIYIEAFKQSHVATAVTGISALNQFRIAMVPIKEMCDTLKVAKD 280
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL----EGREV 124
L +VR++ Y+ DLA+V VD +V +KL+PRID + L E R V
Sbjct: 281 IPSLKNGMYVRLRRTMYRDDLAQVDWVDVAHNKVYLKLVPRIDYTRMRGALRAPDEPRFV 340
Query: 125 AKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+ P R +V+ +E+ V D MT FE G ++ GFLYK + I
Sbjct: 341 KMKRR--PQARLFDVERIKEIGGEVSTDGDFMT---FE---GNQYRRGFLYKWFPLNIIQ 392
Query: 185 AQNIQPTFDELEKFRTPGENGESD-----IASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
++P+ ELEKF+ ++ + + + LS +F+ GD V V+ G+L N
Sbjct: 393 VDGVKPSLSELEKFQETSDDLKKELEGMKVKDLSYIFS--------PGDYVEVMDGELVN 444
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
L+G V+ VD E + + P+ + L + L +N+ EL K+F+ G+HVKV++G G TG++++V
Sbjct: 445 LRGRVQNVDGEKIVMLPDHEDLKEPLTLNACELRKFFKTGDHVKVINGRYEGDTGLIVRV 504
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
E +++I+LSD T +++V DV ++VTTG+ +G ++ +DLV+LD + GVI+R+E
Sbjct: 505 EDNLVILLSDLTMHELKVLPRDVQLCADVTTGVDSLGQFQYQDLVMLDQQTAGVIVRLER 564
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKK-SNVQDRNKNTVAVKDVVRIVEGPCKG--- 415
E +VL +V VK + I K + + + D +N++ VKD V++V+GP
Sbjct: 565 EYLEVLNM---HGKVVRVKPQAIHGKKDTRFAQALDSQQNSIQVKDTVKVVDGPYASRGD 621
Query: 416 ----KQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR--- 468
KQG ++HIYR F+ R H+E+ G K ++V GS+AN + GD +
Sbjct: 622 AEDEKQGEIKHIYRSYAFVMSRKHMENGGLFVCKPRHLLLV-GSKANT-KIGDFIVKGLA 679
Query: 469 ----FNSLR-------TPPRIPQSPGRYSRGG-------------PPAGGRNRGGRGGHD 504
F+S R TP S GR RGG P GG + R D
Sbjct: 680 TPDPFSSPRHIELGGQTPRPGNMSSGRSVRGGATPSQHEGSSVGVPSTGGFDSQNRVRRD 739
Query: 505 -ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI------------ 551
++G +V++ GP KGY G V D Q+ RVEL S K ++VDRS I
Sbjct: 740 NQIIGKSVRITQGPLKGYFGIVKDATEQTARVELHSNCKTISVDRSRIMIVGDGTPGGTL 799
Query: 552 SDNVVVSTPYRD--TPRYGMGSETPMHPSRTPLHPYMTPMRDAG-------ATPIHDGMR 602
++ TP D TP Y G +TPM+ ++TP++ TPM + G TP +DG R
Sbjct: 800 IGGLLGRTPSGDSRTPMYSGGGKTPMYGAQTPMYGSQTPMHEGGRTPHYGALTPSYDGGR 859
Query: 603 TPMRDRAWNP-YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPG 661
TP+ AW+P TP P D+ PS + PTPG+ TPG
Sbjct: 860 TPVHSSAWDPSTTPAHPISDDIH---------------YDEPSSPFNVPTPGAMNPHTPG 904
Query: 662 GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAM 721
N DSS Y P TPGG M + A+ P + G TG A
Sbjct: 905 YN-------PDSS-----LGQTYAPMTPGG--MYADYAAPSPFSDG----RSNTGATAAG 946
Query: 722 SPVIGAD--NEGPWFMPDILVR---------RSGEESVVGVIREVLPDGSCRVVLGSSGN 770
S I N G W D++VR G+E + + V +G C + S
Sbjct: 947 SGAIPQHVLNSGDWVSVDMMVRFRDNYDDDELKGQEGTIKNVDTV--EGRCSIY--SFEL 1002
Query: 771 GDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVD 819
+ A ++I V P++ D+ KI+ G G +G L+ VD T+ +VK D
Sbjct: 1003 DREVMAYFDQILPVKPQQGDRAKIIYGDDIGISGTLVSVDNTEAVVKTD 1051
>gi|355755826|gb|EHH59573.1| hypothetical protein EGM_09714 [Macaca fascicularis]
Length = 951
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 267/857 (31%), Positives = 427/857 (49%), Gaps = 144/857 (16%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 208 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 265
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 266 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 325
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 326 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 380
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + ST ++ +F GD V V +G+L NL+G +
Sbjct: 381 TEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEREHNFQPGDNVEVCEGELINLQGKI 438
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 439 LSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 498
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 499 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 558
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 559 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 615
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R F+H + +E+ G K+ V+ GG R + ++ P SP
Sbjct: 616 FRSFAFLHCKKLVENGGMFVCKTRHLVLAGGPRDVTNFTVGGFA-----------PMSPR 664
Query: 484 RYSRGGPPAGGRNRGGRGGH--------------DALVGTTVKVRLGPYKGYRGRVVDVK 529
S P AGG+ G + L+G TV++ GPYKGY G V D
Sbjct: 665 ISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDAT 724
Query: 530 GQSVRVELESQMKVVTVDRSMISDNVV-----VSTPYRDTPRYGMGSETPMH--PSRTPL 582
+ RVEL S + ++VDR ++ +++ Y TP Y GS+TPM+ SRTP+
Sbjct: 725 ESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMY--GSQTPMYGSGSRTPM 782
Query: 583 HPYMTPMRDAGATPIHDGMRTPMRDRAWNP--YTPMSPPRDNWEDGNPGSWGTSPQYQPG 640
+ TP++D TP H G +TP + +P Y+PM+ PG
Sbjct: 783 YGSQTPLQDGDRTP-HYGSQTPQASPSPSPVGYSPMT---------------------PG 820
Query: 641 SPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSAS 700
+P Y TPGSG N SD T + V YL + GQ S
Sbjct: 821 APSPGGYNPHTPGSGIEQ----NSSDWVT----TDIQVKVRDTYLDTQVVGQTGVIRSV- 871
Query: 701 YLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGEESVVGVIREVLPDGS 760
TGG+ ++ ++ D E VV + E L
Sbjct: 872 --------------TGGMCSV------------YLKD-------SEKVVSISSEHL---- 894
Query: 761 CRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDV 820
E + P K +K+K++ G R ATG L+ +DG DGIV++D+
Sbjct: 895 ---------------------EPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDL 933
Query: 821 SLDVKILDMAILAKLAQ 837
+KIL++ L KL +
Sbjct: 934 DEQLKILNLRFLGKLLE 950
>gi|402591185|gb|EJW85115.1| hypothetical protein WUBG_03973 [Wuchereria bancrofti]
Length = 1052
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 281/869 (32%), Positives = 429/869 (49%), Gaps = 114/869 (13%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESK 68
+ LQI+SV+ + LK IYIEA K++HV A G+ + ++ +VPI+EM D L V
Sbjct: 222 NSLQIKSVVVKEGLKGMIYIEAFKQSHVATAITGVSALNQFRIAMVPIKEMCDTLKVAKD 281
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL----EGREV 124
L +VR++ Y+ DLA+V VD +V +KL+PRID + L E R V
Sbjct: 282 IPSLKNGMYVRLRRTMYRDDLAQVDWVDVAHNKVYLKLVPRIDYTRMRGALRAPDEPRFV 341
Query: 125 AKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+ P R +V+ +E+ V D +T FE G ++ GFLYK + I
Sbjct: 342 KMKRR--PQARLFDVERIKEIGGDVSTDGDFVT---FE---GNQYRRGFLYKWFPLNIIQ 393
Query: 185 AQNIQPTFDELEKFRTPGENGESD-----IASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
++P+ ELEKF+ ++ + + + LS +F+ GD V V G+L N
Sbjct: 394 VDGVKPSLSELEKFQETSDDLKKELEGMKVKDLSCIFS--------PGDYVEVADGELVN 445
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
L+G V+ VD E + + P+ + L + L +N+ EL K+F+ G+HVKV++G G TG++++V
Sbjct: 446 LRGRVQSVDGEKIVMLPDHEDLKEPLTLNACELRKFFKTGDHVKVINGRYEGDTGLIVRV 505
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
E +++I+LSD T +++V DV ++VTTG+ +G ++ +DLV+LD + GVI+R+E
Sbjct: 506 EDNLVILLSDLTMHELKVLPRDVQLCADVTTGVDSLGQFQYQDLVMLDQQTAGVIVRLER 565
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKK-SNVQDRNKNTVAVKDVVRIVEGPCKG--- 415
E +VL +V VK + I K + + + D +N++ VKD V++V+GP
Sbjct: 566 EYLEVLNM---HGKVVRVKPQAIHGKKDTRFAQALDSQQNSIQVKDTVKVVDGPYASRGD 622
Query: 416 ----KQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRAN---------GDRN 462
KQG ++HIYR F+ R H+E+ G K ++V GS+AN G
Sbjct: 623 AEDEKQGEIKHIYRSYAFVMSRKHMENGGLFVCKPRHLLLV-GSKANTKIGDFIVKGLAT 681
Query: 463 GDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGY 521
D +S + + P+ G S G P GG + R D ++G +V++ GP KGY
Sbjct: 682 PDPFSSPRHVELGGQTPRPEGS-SVGVPSTGGFDSQNRVRRDNQIIGKSVRITQGPLKGY 740
Query: 522 RGRVVDVKGQSVRVELESQMKVVTVDRSMIS------------DNVVVSTPYRD--TPRY 567
G V D Q+ RVEL S K ++VDRS I + TP D TP Y
Sbjct: 741 FGIVKDATEQTARVELHSNCKTISVDRSRIMIVGDGTPGGTLIGGFLGRTPSGDSRTPMY 800
Query: 568 GMGSETPMHPSRTPLHPYMTPMRDAG-------ATPIHDGMRTPMRDRAWNP-YTPMSPP 619
G +TPM+ ++TP++ TPM + G TP +DG RTP+ AW+P TP P
Sbjct: 801 SGGGKTPMYGAQTPMYGSQTPMHEGGRTPHYGALTPSYDGGRTPVHSSAWDPSTTPAHPI 860
Query: 620 RDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVN 679
D+ PS + PTPG+ TPG N DSS
Sbjct: 861 SDDIH---------------YDEPSSPFNVPTPGAMNPHTPGYN-------PDSS----- 893
Query: 680 APSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDIL 739
Y P TPGG M + A+ P + G G A+ + N G W D++
Sbjct: 894 LGQSYAPMTPGG--MYADYAAPSPFSDGRSNTGGAAAGSGAIPQHVL--NSGEWVSVDMM 949
Query: 740 VR---------RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTD 790
VR G+E + + V +G C + S +TA ++I V P++ D
Sbjct: 950 VRFRDNYDDDELKGQEGTIKNVDSV--EGRCSIY--SFELDREVTAYFDQILPVKPQQGD 1005
Query: 791 KIKIMGGPHRGATGKLIGVDGTDGIVKVD 819
+ KI+ G G +G L+ VD T+ +VK D
Sbjct: 1006 RAKIIYGDDIGISGTLVSVDNTEAVVKTD 1034
>gi|170580854|ref|XP_001895436.1| Micro-fibrillar-associated protein 1 C-terminus containing protein
[Brugia malayi]
gi|158597624|gb|EDP35722.1| Micro-fibrillar-associated protein 1 C-terminus containing protein
[Brugia malayi]
Length = 1533
Score = 358 bits (919), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 289/912 (31%), Positives = 441/912 (48%), Gaps = 147/912 (16%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
LQI+SV+ + LK IYIEA K++HV A G+ + ++ +VPI+EM D L V
Sbjct: 224 LQIKSVVVKEGLKGMIYIEAFKQSHVATAITGVSALNQFRIAMVPIKEMCDTLKVAKDIP 283
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL----EGREVAK 126
L +VR++ Y+ DLA+V VD +V +KL+PRID + L E R V
Sbjct: 284 SLKNGMYVRLRRTMYRDDLAQVDWVDVAHNKVYLKLVPRIDYTRMRGALRAPDEPRFVKM 343
Query: 127 KKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQ 186
K+ P R +++ +E+ V D +T FE G ++ GFLYK + I
Sbjct: 344 KRR--PQARLFDIERIKEIGGDVSTDGDFVT---FE---GNQYRRGFLYKWFPLNIIQVD 395
Query: 187 NIQPTFDELEKFRTPGENGESD-----IASLSTLFANRKKGHFMKGDAVIVIKGDLKNLK 241
++P+ ELEKF+ ++ + + + LS +F+ GD V V G+L NL+
Sbjct: 396 GVKPSLSELEKFQETSDDLKKELEGMKVKDLSCIFS--------PGDYVEVADGELVNLR 447
Query: 242 GWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQ 301
G V+ VD E + + P+ + L + L +N+ EL K+F+ G+HVKV++G G TG++++VE
Sbjct: 448 GRVQSVDGEKIVMLPDHEDLKEPLTLNACELRKFFKTGDHVKVINGRYEGDTGLIVRVED 507
Query: 302 HVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEA 361
+++I+LSD T +++V DV ++VTTG+ +G ++ +DLV+LD + GVI+R+E E
Sbjct: 508 NLVILLSDLTMHELKVLPRDVQLCADVTTGVDSLGQFQYQDLVMLDQQTAGVIVRLEREY 567
Query: 362 FQVLKGVPDRPEVALVKLREIKCKLEKK-SNVQDRNKNTVAVKDVVRIVEGPCKG----- 415
+VL +V VK + I K + + + D +N++ VKD V++V+GP
Sbjct: 568 LEVLNM---HGKVVRVKPQAIHGKKDTRFAQALDSQQNSIQVKDTVKVVDGPYASRGDAE 624
Query: 416 --KQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR----- 468
KQG ++HIYR F+ R H+E+ G K ++V GS+AN + GD +
Sbjct: 625 DEKQGEIKHIYRSYAFVMSRKHMENGGLFVCKPRHLLLV-GSKANT-KIGDFIVKGLATP 682
Query: 469 --FNSLR-------TPPRIPQSPGRYSRGG--------------------PPAGGRNRGG 499
F+S R TP S GR RGG P GG +
Sbjct: 683 DPFSSPRHVELGGQTPRPGNMSSGRSIRGGATPSQHGKFCVTAEGSSVGVPSTGGFDSQN 742
Query: 500 RGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS---MISDNV 555
R D ++G +V++ GP KGY G V D Q+ RVEL S K ++VDRS ++ D +
Sbjct: 743 RVRRDNQIIGKSVRITQGPLKGYFGIVKDATEQTARVELHSNCKTISVDRSRIMIVGDGI 802
Query: 556 ---------VVSTPYRD--TPRYGMGSETPMHPSRTPLHPYMTPMRDAG-------ATPI 597
+ TP D TP Y G +TPM+ ++TP++ TPM + G TP
Sbjct: 803 PGGTFIGGFLGRTPSGDSRTPMYSGGGKTPMYGAQTPMYGSQTPMHEGGRTPHYGALTPS 862
Query: 598 HDGMRTPMRDRAWNP-YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGW 656
+DG RTP+ AW+P TP P D+ PS + PTPG+
Sbjct: 863 YDGGRTPVHSSAWDPSTTPAHPISDDIH---------------YDEPSSPFNVPTPGAMN 907
Query: 657 ASTPGGN------------------YSDAGTPRDSSSTYVN--APSPYLPSTPGGQPMTP 696
TPG N + + S STYV A Y P TPGG M
Sbjct: 908 PHTPGYNPDSSLGKICYFKISFAMDFGELLKVNSSVSTYVRIVAGQSYAPMTPGG--MYA 965
Query: 697 NSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVR---------RSGEES 747
+ A+ P + G + G A+ + N G W D++VR G+E
Sbjct: 966 DYAAPSPFSDGRSNTSGAVTGSGAIPQHVL--NSGEWVSVDMMVRFRDSYDDDELKGQEG 1023
Query: 748 VVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLI 807
V + V +G C + S + A ++I V P++ D+ KI+ G G +G L+
Sbjct: 1024 TVKNVDNV--EGRCSIY--SFELDREVMAYFDQILPVKPQQGDRAKIIYGDDIGISGTLV 1079
Query: 808 GVDGTDGIVKVD 819
VD T+ +VK D
Sbjct: 1080 SVDNTEAVVKTD 1091
>gi|412993268|emb|CCO16801.1| predicted protein [Bathycoccus prasinos]
Length = 1115
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 284/902 (31%), Positives = 425/902 (47%), Gaps = 156/902 (17%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKV-MLVPIREMTDVLAVESKA 69
++I SV+ DHLK Y+Y+EA ++ HVK+A +GLR++Y K LVP++EM + ++V K
Sbjct: 287 MKIMSVVTQDHLKGYVYVEAMRDDHVKKALQGLRHVYHMKPPKLVPLKEMVESISVAKKE 346
Query: 70 IDLSR-DTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKK 128
+++ R D+WVRM+ G YK DLAKVV+V+ VK++PR D Q LA+K G K K
Sbjct: 347 VEVIRPDSWVRMRSGVYKADLAKVVEVNYGDNSCVVKILPRFDYQHLADKESGEAKNKPK 406
Query: 129 PFV-PPPRFMNVDEARELHIRVER-RRDPMTGDYFENIGGML-FKDGFLYKTVSMKSISA 185
P V P R + EA+ ++ ER + D D + + G KDG+L K ++ ++
Sbjct: 407 PTVRPAARLFSETEAKNKNLSFERGKFDRTLNDRVDVLCGTHKIKDGYLLKRCALTTVKL 466
Query: 186 QNIQPTFDELEKF-----------------------RTPGENGESDIASLSTLFANRKKG 222
P+ DE++KF R N + I L+ L N KK
Sbjct: 467 TEA-PSLDEIQKFAPGGDEEDDDFDDEEDDEDGGARRKKSTN--NHINRLAKLTMNEKKA 523
Query: 223 ------HFMKGDAVIVIKGDLKNLKGWVEKVDEE-NVHIRPEMKGLPKTLAVNSKELCKY 275
F+ GD VIV++GDL+NL+G +++VD + V + P K L L N ++L K+
Sbjct: 524 SKSAAARFLVGDQVIVVEGDLRNLEGVIKRVDADGRVIVDPSHKDLTDPLPFNPEQLRKH 583
Query: 276 FEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKI 335
F+ G+ V+VV G GA+GMV+KV + + S +T E+ VF D+ + +E T + +I
Sbjct: 584 FKVGSTVRVVHGAHEGASGMVVKVSDQIATVFSTSTNEEFSVFMRDLADDAEAATRVDRI 643
Query: 336 GDYELRDLVLLDNNSFGVIIRVESEAFQVLK--GVPDRPEVALVKLREIKCKLEKKSN-V 392
G+Y L DL +LD+ + GV+ RVE + VL G +RP V KL + K K+ ++
Sbjct: 644 GEYALHDLAMLDDGNVGVLTRVEKDVAFVLTNVGTLERPNVKACKLADFKRKMNSRNQTA 703
Query: 393 QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVV 452
QD + V +VRI EG K VEHIY+G +++ R G +C +S C V
Sbjct: 704 QDGAMELIDVGSIVRINEGQLKDVNATVEHIYKGTIWVKARGVQRDGGIVCLRSRQCFVH 763
Query: 453 GGSRANGDRNGDA--------YSRF-NSLRTPPR--IPQSPGRYSRGGPPAGG------- 494
GG G R G A S F N+ ++P I QS G ++ +GG
Sbjct: 764 GG---QGTRQGGAIPGLTPAMQSAFTNAPKSPGHALIAQSMGLTAQMANASGGMYQQPAV 820
Query: 495 -------RNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVD 547
+ R GR D +VG V +R G Y GY+G+VVD ++ RVEL++Q + VTV+
Sbjct: 821 QQRRPVIQQRMGRERADPMVGKLVTIRRGVYAGYKGKVVDCGPKTARVELQAQARTVTVN 880
Query: 548 RSMISDNVVVSTPYRDTP-----RYGMGSE-TPMHPSRTPLHPYMTPMRDAGATPIHDGM 601
R + +T Y YG G + + ++TP H TP AG
Sbjct: 881 RDELGGGPGSTTTYGTAAPAAYGGYGYGQQPVDRYAAQTPAHTAATPAHGAGYAT----- 935
Query: 602 RTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPG 661
TP RD AWNP M+P RD+ +WG A P A +
Sbjct: 936 -TPARDNAWNP--TMTPGRDD-------AWG----------------ADEPAGAHAGSIA 969
Query: 662 GNY--SDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPN--SASYLPGTPGGQPMTPGTGG 717
Y +D G G + + P+ YLPGT + G+ G
Sbjct: 970 AEYGKNDKG---------------------GKKQLVPDGYDGDYLPGTV--VKLMNGSQG 1006
Query: 718 LDAMSPVIGADNEGPWFMPDILVRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITAL 777
+ + V G P I +SG E + R + T
Sbjct: 1007 V--VKRVHGVGGSALDVQPGISNVKSGVEHFEKISRGARAE----------------TVA 1048
Query: 778 PNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSL-----DVKILDMAIL 832
+E+V P K D + ++ G RG +L+ VDG DG++K+ S +V I+DM+ L
Sbjct: 1049 EENVELVVPLKGDDVIVVNGDERGEVAELVMVDGADGVLKIKSSNQEKNGEVIIVDMSRL 1108
Query: 833 AK 834
A+
Sbjct: 1109 AR 1110
>gi|158293811|ref|XP_001231045.2| AGAP005021-PA [Anopheles gambiae str. PEST]
gi|157016625|gb|EAU76692.2| AGAP005021-PA [Anopheles gambiae str. PEST]
Length = 1090
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 289/884 (32%), Positives = 441/884 (49%), Gaps = 100/884 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRN----IYSQKVMLVPIREMTDVLAVE 66
+QI+SV+A + +K YIYIEA K+AHVK A + N I+ Q+ +VPI++MTD+L V
Sbjct: 248 MQIKSVVAPESVKGYIYIEAYKQAHVKSAINNVGNLRVGIWKQE--MVPIKDMTDILKVV 305
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL-----ANKLEG 121
+ L WVR+K G YK D+A+V VD + +V +KL+PRID L A + E
Sbjct: 306 KEQTGLKPKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRLRGALRATQTEE 365
Query: 122 REVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMK 181
AK+K P + + + R I E D GD+ G + GFLYK +M
Sbjct: 366 SSDAKRKKRRPAAKSFDPEAIRA--IGGELTSD---GDFLIFEGNRYSRKGFLYKAFTMS 420
Query: 182 SISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLK 241
++ A ++PT ELE+F E ++A +S+ F GD V V GDL NL+
Sbjct: 421 AVLADGVKPTLAELERFEEQPEEINIELA-VSSKEDPVTAHSFSMGDNVEVCVGDLMNLQ 479
Query: 242 GWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQ 301
+ +D + + P+ + L L + EL KYF+ G+HVKV++G G TG++++VE
Sbjct: 480 AKIIAIDGSLITVMPKHEELRDPLIFKAAELRKYFKTGDHVKVLAGRYEGETGLIVRVEP 539
Query: 302 HVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEA 361
++++SD T ++ V D+ +++ TG+ +G Y+ DLV LD + GVI+R+E E
Sbjct: 540 SRIVLVSDLTMHELEVLPRDLQLCTDMATGVDSLGIYQWGDLVQLDAQTVGVIVRLEREN 599
Query: 362 FQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQ 417
F VL K + +P AL K RE + + D ++N + KD+V+++EGP G+
Sbjct: 600 FHVLGMHGKVIECKP-TALQKRRE-----NRNTIALDWDQNQIRRKDIVKVMEGPHTGRD 653
Query: 418 GPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPR 477
G ++H+YR + F+H R + E+ G K+ + GG++ + S F PR
Sbjct: 654 GEIKHLYRNLAFLHSRMYTENGGIFVVKTRHLQLAGGNKNPMQNSNPMMSPFGGGIMSPR 713
Query: 478 I--PQSPGRYSRGGPPAGGRNRGGRGGHDA-------LVGTTVKVRLGPYKGYRGRVVDV 528
I P P GG R G G A ++G T+++ GPYKG G V D
Sbjct: 714 IHSPMHPSGGRGGGGGGPTRGGRGGGRGGARVSRDREILGRTIRITGGPYKGAVGIVKDA 773
Query: 529 KGQSVRVELESQMKVVTVDRSMI-----------SDNVVVSTPYRDTPRYGMGSETPMHP 577
+ RVEL S + ++VDR+ I S + + TP R TP G++TP++
Sbjct: 774 TETTARVELHSSCQTISVDRNHIAIVDGGATKAGSVSSYMRTPSR-TPAGSYGAQTPVYS 832
Query: 578 -SRTPLHPYMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDN----WED 625
S+TPLH TP D G+ TP HDG TP R AW+P +P R N E+
Sbjct: 833 GSKTPLHGSQTPQYDPGSRTPYGSMTPSHDGSMTP-RHGAWDPTVSNTPARSNDFDFMEE 891
Query: 626 GNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPY- 684
+P SP Y P +P Y+ TP +A GN +A D+ S Y +P+P
Sbjct: 892 PSP-----SPGYNPSTP---GYQINTP---YAPHTPGNMFNA----DNYSPYQASPNPSP 936
Query: 685 LPSTPGGQPMTPNSASYLPGTPGG-----QPMTPGTGGLDAMSPVIGADNEGPWFMPDI- 738
P GG TP+ ++Y P TPG P TPG G + P +G WF DI
Sbjct: 937 SPYQVGGYIGTPSPSAYSPATPGAPASPYNPQTPGAG----LDPQLGD-----WFTTDIE 987
Query: 739 -LVRRSGEESV---VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKI 794
+R G+ + G+IR V +G C V L + +T + ++ V P +K K+
Sbjct: 988 VTIRSHGDSDLSGQTGIIRTV-NNGDCVVFLPEEDH--CVTVPLSNLQPVLPEPGEKFKV 1044
Query: 795 MGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQP 838
+ G R G+ I + G++ V V ++ ++ M +A+ +P
Sbjct: 1045 IVGEDRETVGEFIDMSGSNEAV-VMINGQSTLIPMNYMARYREP 1087
>gi|301115069|ref|XP_002999304.1| transcription elongation factor SPT5, putative [Phytophthora
infestans T30-4]
gi|262111398|gb|EEY69450.1| transcription elongation factor SPT5, putative [Phytophthora
infestans T30-4]
Length = 1142
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 319/969 (32%), Positives = 455/969 (46%), Gaps = 174/969 (17%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M K I+ +G L ++SV+A + K +IY+EA++E H K+ GLR++ + LVPI
Sbjct: 178 MNKFIEFARRGEPLMVKSVVASNS-KGFIYVEAEREPHAKDCLNGLRDVQQWSMKLVPIH 236
Query: 58 EMTDVLAVESKAIDLSRDTWVRMK-IGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA 116
EMT VL V+++ L W RMK G YKGDL KV+++ + R VK+IPR+D LA
Sbjct: 237 EMTSVLNVQTRRKPLVAGAWARMKRAGLYKGDLCKVIEILDNGARAVVKMIPRLDPIVLA 296
Query: 117 NKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYK 176
G + KK PP + + + V RRR P TG+ + +++GFL K
Sbjct: 297 G---GEQPKYKKGQRPPQKLFHANMVPGAD--VARRRYPSTGEMMDTFDNDFYQEGFLIK 351
Query: 177 TVSMKS-ISAQNIQPTFDELEKFRT-PGENGESDIAS-LSTLFAN--RKKGHFMKGDAVI 231
V++ + ++ +++ P+ DE+ +F + GE+GE L+++ A+ + K KGD V
Sbjct: 352 EVNIATMLTTEDVNPSLDEINRFSSVAGEDGEHTAEEMLASVEADDWKNKVDLTKGDTVR 411
Query: 232 VIKGDLKNLKGWVEKVDEEN--VHIRPEMKGLPKT-LAVNSKELCKYFEPGNHVKVVSGT 288
VI+GDL NL G V + N V + P + + T L K+L KY + G+H+KVVSG
Sbjct: 412 VIEGDLINLMGVVLSTNTANDTVRVMPLHEEIKDTILDFQLKQLMKYVKVGDHIKVVSGM 471
Query: 289 QAGATGMVLKVEQH----VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLV 344
+G TG V+ V+ V I+L D+ +I+V D+ ES+E++ G+ EL DLV
Sbjct: 472 YSGETGTVVAVDDSEGAPVAIVLVDSMAREIQVRVRDLQESAEISHGLDSFKGKELYDLV 531
Query: 345 LLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKL--EKKSNVQDRNKNTVAV 402
L + GVI V E F VL + + +E++ K+ + + D+ N V+V
Sbjct: 532 ALAHGDVGVITHVGREGFTVLC---QNGQSRNISDQEVQRKIVSSRTTAALDKKHNHVSV 588
Query: 403 KDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN 462
++V +VEGP G G V+HIYR LFIH+ ++G ++ V++ GS+A D
Sbjct: 589 GEMVNVVEGPFSGHSGTVKHIYRTYLFIHNNRVTTNSGMFVTRARG-VILSGSKARSD-- 645
Query: 463 GDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDA----LVGTTVKVRLGPY 518
S T PR+ AG R + RGG + L+G TVKV+ G +
Sbjct: 646 ------MISNSTVPRM------------DAGMRQQNQRGGRNQRESELIGQTVKVKKGRW 687
Query: 519 KGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYG---MGSETPM 575
KGY G VVD Q V+VE+ + KVV +DR I+ D PRY M TP+
Sbjct: 688 KGYIGIVVDESDQKVKVEIHCKAKVVDIDRLHITVAGTRDGSVVDKPRYAGTPMTGATPL 747
Query: 576 HPSRTPLH-PYMTPMRDAGATPIHDGMRTPMRDR----AW-------------------- 610
PS+TPLH MTPM ATP+H GM TP AW
Sbjct: 748 -PSQTPLHGSAMTPM----ATPLHRGMGTPQSSARAGDAWNVGNDDALLETQMNQEKDIT 802
Query: 611 ------------------------NPYTPMSPPRDNWEDG------------------NP 628
NP TPM+ PR DG P
Sbjct: 803 HANSFGVPLEPTAPSSDMSSNRYSNPTTPMA-PRSPTRDGMIPVTPAVNPTTPGLNPTTP 861
Query: 629 GSWGTSPQYQPGSPPSRAYEAP--------TPGSGWASTPGGNYSDAG----TPRDSSST 676
G T+P QP +P P TP A+TPG G TP + +T
Sbjct: 862 GLNPTTPGLQPRTPAYMMGHNPTTPGLNPTTPAHLSAATPGMGLEPIGMEPMTPGFNPTT 921
Query: 677 -YVNAPSPYL-PSTPG-------GQPMTPNSASYLP-------GTPGGQPMTPGTGGLDA 720
++A +P L P TPG PMTP P TP P G+GG+
Sbjct: 922 PGLSAMTPGLNPVTPGINTPGYSHNPMTPGFGVATPMGRMNSAATPAATPGMMGSGGI-P 980
Query: 721 MSPVIG----------ADNEGPWFMPDILVRR-SGEES-VVGVIREVLPDGSCRVVLGSS 768
M+P A+ E W M + V +GE + VGVI V GSC + +
Sbjct: 981 MTPAFNQDLNDAAGGPANGEVTWKMKGVEVEVIAGEHNGSVGVITSV-SSGSCSIDV--- 1036
Query: 769 GNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILD 828
+G IT N++ V P K D + I+ G G G LIG D +DGIVKVD ++KI
Sbjct: 1037 -DGRVITVSFNDVRPVVPEKQDTVIILSGDEAGTRGSLIGTDASDGIVKVDGGSEIKIYA 1095
Query: 829 MAILAKLAQ 837
+A LAK+A
Sbjct: 1096 IASLAKIAH 1104
>gi|312065458|ref|XP_003135800.1| hypothetical protein LOAG_00212 [Loa loa]
Length = 1409
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 290/912 (31%), Positives = 435/912 (47%), Gaps = 161/912 (17%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
LQI+SV+ + LK IYIEA K++HV A G+ + ++ +VPI+EM D L V
Sbjct: 538 LQIKSVVVKEGLKGMIYIEAFKQSHVATAVTGISALNQFRIAMVPIKEMCDTLKVAKDIP 597
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL----EGREVAK 126
L +VR++ Y+ DLA+V VD +V +KL+PRID + L E R V
Sbjct: 598 SLKNGMYVRLRRTMYRDDLAQVDWVDVAHNKVYLKLVPRIDYTRMRGALRAPDEPRFVKM 657
Query: 127 KKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQ 186
K+ P R +V+ +E+ V D MT FE G ++ GFLYK + I
Sbjct: 658 KRR--PQARLFDVERIKEIGGEVSTDGDFMT---FE---GNQYRRGFLYKWFPLNIIQVD 709
Query: 187 NIQPTFDELEKFRTPGENGESD-----IASLSTLFANRKKGHFMKGDAVIVIKGDLKNLK 241
++P+ ELEKF+ ++ + + + LS +F+ GD V V+ G+L NL+
Sbjct: 710 GVKPSLSELEKFQETSDDLKKELEGMKVKDLSYIFS--------PGDYVEVMDGELVNLR 761
Query: 242 GWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQ 301
G V+ VD E + + P+ + L + L +N+ EL K+F+ G+HVKV++G G TG++++VE
Sbjct: 762 GRVQNVDGEKIVMLPDHEDLKEPLTLNACELRKFFKTGDHVKVINGRYEGDTGLIVRVED 821
Query: 302 HVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEA 361
+++I+LSD T +++V DV ++VTTG+ +G ++ +DLV+LD + GVI+R+E E
Sbjct: 822 NLVILLSDLTMHELKVLPRDVQLCADVTTGVDSLGQFQYQDLVMLDQQTAGVIVRLEREY 881
Query: 362 FQVLKGVPDRPEVALVKLREIKCKLEKK-SNVQDRNKNTVAVKDVVRIVEGPCKG----- 415
+VL +V VK + I K + + + D +N++ VKD V++V+GP
Sbjct: 882 LEVLNM---HGKVVRVKPQAIHGKKDTRFAQALDSQQNSIQVKDTVKVVDGPYASRGDAE 938
Query: 416 --KQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR----- 468
KQG ++HIYR F+ R H+E+ G K ++V GS+AN + GD +
Sbjct: 939 DEKQGEIKHIYRSYAFVMSRKHMENGGLFVCKPRHLLLV-GSKANT-KIGDFIVKGLATP 996
Query: 469 --FNSLR-------TPPRIPQSPGRYSRGG------------------------------ 489
F+S R TP S GR RGG
Sbjct: 997 DPFSSPRHIELGGQTPRPGNMSSGRSVRGGATPSQHGKVVTKTVQENLSINCVIQKINEV 1056
Query: 490 --------PPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQ 540
P GG + R D ++G +V++ GP KGY G V D Q+ RVEL S
Sbjct: 1057 LEGSSVGVPSTGGFDSQNRVRRDNQIIGKSVRITQGPLKGYFGIVKDATEQTARVELHSN 1116
Query: 541 MKVVTVDRSMI------------SDNVVVSTPYRD--TPRYGMGSETPMHPSRTPLHPYM 586
K ++VDRS I ++ TP D TP Y G +TPM+ ++TP++
Sbjct: 1117 CKTISVDRSRIMIVGDGTPGGTLIGGLLGRTPSGDSRTPMYSGGGKTPMYGAQTPMYGSQ 1176
Query: 587 TPMRDAG-------ATPIHDGMRTPMRDRAWNP-YTPMSPPRDNWEDGNPGSWGTSPQYQ 638
TPM + G TP +DG RTP+ AW+P TP P D+
Sbjct: 1177 TPMHEGGRTPHYGALTPSYDGGRTPVHSSAWDPSTTPAHPISDDIH-------------- 1222
Query: 639 PGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNS 698
PS + PTPG+ TPG N DSS Y P TPGG M +
Sbjct: 1223 -YDEPSSPFNVPTPGAMNPHTPGYN-------PDSS-----LGQTYAPMTPGG--MYADY 1267
Query: 699 ASYLPGTPGGQPMTPGTGGLDAMSPVIGAD--NEGPWFMPDILVR---------RSGEES 747
A+ P + G TG A S I N G W D++VR G+E
Sbjct: 1268 AAPSPFSDG----RSNTGATAAGSGAIPQHVLNSGDWVSVDMMVRFRDNYDDDELKGQEG 1323
Query: 748 VVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLI 807
+ + V +G C + S + A ++I V P++ D+ KI+ G G +G L+
Sbjct: 1324 TIKNVDTV--EGRCSIY--SFELDREVMAYFDQILPVKPQQGDRAKIIYGDDIGISGTLV 1379
Query: 808 GVDGTDGIVKVD 819
VD T+ +VK D
Sbjct: 1380 SVDNTEAVVKTD 1391
>gi|348683762|gb|EGZ23577.1| hypothetical protein PHYSODRAFT_484339 [Phytophthora sojae]
Length = 1104
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 315/968 (32%), Positives = 447/968 (46%), Gaps = 172/968 (17%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M K I+ +G L ++SV+A + K +IY+EA++E H K+ GLR++ + LVPI
Sbjct: 178 MNKFIEFARRGEPLMVKSVVASNS-KGFIYVEAEREPHAKDCLNGLRDVQQWSMKLVPIH 236
Query: 58 EMTDVLAVESKAIDLSRDTWVRMK-IGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA 116
EMT VL ++K L W RMK G YKGDL KV+++ + R VK+IPR+D LA
Sbjct: 237 EMTSVLNFQTKRKPLVVGAWARMKRAGLYKGDLCKVIEILDNGARAVVKMIPRLDPIVLA 296
Query: 117 NKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYK 176
G + KK P + + + V RRR P TG+ + + +GFL K
Sbjct: 297 G---GEQPKYKKGQRPAQKLFHANMVPGAD--VARRRYPSTGEMMDTFDNDFYHEGFLIK 351
Query: 177 TVSMKS-ISAQNIQPTFDELEKFRT-PGENGESDIAS-LSTLFAN--RKKGHFMKGDAVI 231
V++ + ++ +++ PT DE+ +F + GE+GE L+++ A+ + K KGD V
Sbjct: 352 EVNIATMLTTEDVNPTLDEINRFSSVAGEDGEQSAEDMLASVEADDWKNKVDLTKGDTVR 411
Query: 232 VIKGDLKNLKGWVEKVDEEN--VHIRPEMKGLPKT-LAVNSKELCKYFEPGNHVKVVSGT 288
VI+GDL NL G V + N V + P + + T L K+L KY + G+H+KVVSG
Sbjct: 412 VIEGDLINLMGVVLSTNTANDTVRVMPLHEEIKDTILDFQLKQLMKYVKVGDHIKVVSGM 471
Query: 289 QAGATGMVLKVEQH----VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLV 344
+G TG V+ V+ V I+L D+ +I+V D+ ES+E++ G+ EL DLV
Sbjct: 472 YSGETGTVVAVDDSEGAPVAIVLVDSMAREIQVRVRDLQESAEISQGLDSYKGKELYDLV 531
Query: 345 LLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKL--EKKSNVQDRNKNTVAV 402
L + GVI V E F VL + + +E++ K+ + + D+ N V+V
Sbjct: 532 ALAHGDVGVITHVGREGFTVLC---QNGQSRNISDQEVQRKIVSSRTTAALDKKHNHVSV 588
Query: 403 KDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN 462
++V +VEGP G G V+HIYR LFIH+ ++G ++ V++ GS+A D
Sbjct: 589 GEMVNVVEGPFSGHSGTVKHIYRTYLFIHNNRITTNSGIFVTRARG-VILSGSKARSD-- 645
Query: 463 GDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDA----LVGTTVKVRLGPY 518
S T PR+ AG R + RGG + L+G TVKV+ G +
Sbjct: 646 ------MISNSTVPRM------------DAGMRQQNQRGGRNQRESELIGQTVKVKKGRW 687
Query: 519 KGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYG---MGSETPM 575
KGY G VVD Q V+VE+ + K+V +DR I+ D PRY M TP+
Sbjct: 688 KGYIGIVVDESDQKVKVEIHCKAKIVDIDRLHITVAGTRDGGVVDKPRYAGTPMTGATPL 747
Query: 576 HPSRTPLH-PYMTPMRDAGATPIHDGMRTPMRD----RAW-------------------- 610
PS+TPLH MTPM ATP+H GM TP AW
Sbjct: 748 -PSQTPLHGSAMTPM----ATPLHRGMGTPQSSGRAGEAWNVANDDALLETQMNQEKDIT 802
Query: 611 ------------------------NPYTPMSPPRDNWEDG-----------NPGSWGTSP 635
NP TPM+ PR DG PG T+P
Sbjct: 803 HATSFGTPLEPTAPSSDMSSSRYSNPTTPMA-PRSPTRDGMMPVTPAANPTTPGLNPTTP 861
Query: 636 QYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMT 695
QP +P PT +TPG N + ++ + P P TPG P T
Sbjct: 862 GLQPRTPAYMMGHNPTTPGLNPTTPGLNPTTPAHLSAATPGMGHEPMGMEPMTPGFNPTT 921
Query: 696 PNSASYLPG----TPG-------GQPMTPGTG------------------GLDA-----M 721
P ++ PG TPG PMTPG G G+ M
Sbjct: 922 PGLSAMTPGLNPVTPGINTPGYNHNPMTPGFGVATPMGRMNSAATPAATPGMMGGNGVPM 981
Query: 722 SPVIGAD----------NEGPWFMPDILVRR-SGE-ESVVGVIREVLPDGSCRVVLGSSG 769
+P D E W M + V +GE VG I V GSC + +
Sbjct: 982 TPAFNHDMNDSAGGPASGEVTWKMKGVEVEVIAGELNGSVGAITNV-SGGSCSIDV---- 1036
Query: 770 NGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDM 829
+G IT N++ V P K D + I+ G G G LIG D +DGIVKVD ++KI +
Sbjct: 1037 DGRVITVSLNDVRPVVPEKQDTVIILSGDEAGTRGSLIGTDASDGIVKVDGGSEIKIYAI 1096
Query: 830 AILAKLAQ 837
A LAK+AQ
Sbjct: 1097 ASLAKIAQ 1104
>gi|195028306|ref|XP_001987017.1| GH20202 [Drosophila grimshawi]
gi|193903017|gb|EDW01884.1| GH20202 [Drosophila grimshawi]
Length = 1082
Score = 353 bits (906), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 281/877 (32%), Positives = 431/877 (49%), Gaps = 100/877 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
LQI+S+IA + +K YIY+EA K+ HVK A + N+ K +VPI+EMTDVL V +
Sbjct: 250 LQIKSIIAPEGVKGYIYLEAYKQTHVKTAIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKE 309
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
+ L WVR+K G YK D+A+V VD + +V +KL+PRID + L E +
Sbjct: 310 QVGLKLKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGALRTTATETDD 369
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK PP + + + R + V GD+ G + GFLYK +M +I
Sbjct: 370 SKRKKKRRPPAKPFDPEAVRAIGGEVHS-----DGDFLLFEGSRYSRKGFLYKNFNMSAI 424
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
++ ++PT ELE+F E E ++ ++ + + H F GD V V GDL+NL+
Sbjct: 425 LSEGVKPTLAELERFEETPE--EVNLEIMANVKDDPTAAHSFSMGDNVEVCVGDLENLQA 482
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + + P+ + L L + EL KYF+ G+H +V++G G TG++++VE
Sbjct: 483 KIVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLIIRVEPQ 542
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++SD T ++ V D+ S+V TG+ +G ++ DLV LD+ + GVI+R+E E F
Sbjct: 543 RVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDLVQLDSQNVGVIVRLERENF 602
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
VL K + +P AL K RE + + D ++N + +D+V+++EGP G+ G
Sbjct: 603 HVLGMNGKCIECKP-TALHKRRE-----NQNTVALDADQNQIRRRDIVKVMEGPHAGRSG 656
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL----RT 474
++H+YR + F+H R + E+ G K+ + GGS+ N S N+L
Sbjct: 657 EIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTN-------VSNANTLGGLGFM 709
Query: 475 PPRI--PQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
PRI P P + G G R D L+G T+K+ GPYKG G V D
Sbjct: 710 SPRIQSPMHPSGGRGARGGSRGGRGGFRVTRDRELLGKTIKICGGPYKGAVGIVKDATES 769
Query: 532 SVRVELESQMKVVTVDRSMISDNVVVSTP--------YRDTPRY--GMGSETPMHP---S 578
+ RVEL + + ++VDR+ I V+V P Y TP G G++TP + S
Sbjct: 770 TARVELHTSCQTISVDRNHI---VIVGEPGKEGSVSTYGRTPARTPGYGAQTPSYTAAGS 826
Query: 579 RTPLHPYMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW 631
+TPL TP D TP HDG TP R AW+P +P R+ D +
Sbjct: 827 KTPLVGSQTPNWDTDTRTPYGTMTPSHDGSMTP-RHGAWDPTANTTPARNTDFDYSLEEP 885
Query: 632 GTSPQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST---YVNAPSP-- 683
SP Y P +P S + TPG+ + S + + S Y+N PSP
Sbjct: 886 SPSPGYNPSTPGYQMSSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMNTPSPST 945
Query: 684 YLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRS 743
Y P+TPGG P +P Y P TPG LD+ + G W DI VR
Sbjct: 946 YSPNTPGGVPQSP----YNPQTPG--------ASLDS--------SMGDWCTTDIEVRIH 985
Query: 744 GEESV-----VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGP 798
+ G+IR V +G C V L +++ + + VPP D+ K++ G
Sbjct: 986 THDDTDLVGQTGIIRTV-SNGVCSVFLRQEDR--SVSIVSEHLAPVPPNSGDEFKVIYGE 1042
Query: 799 HRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
R + GK++ D +V ++ DVK++ + L K+
Sbjct: 1043 ERESVGKVLSKQEGDVLV-CKINDDVKMIPINHLCKM 1078
>gi|313244795|emb|CBY15499.1| unnamed protein product [Oikopleura dioica]
Length = 926
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 295/921 (32%), Positives = 452/921 (49%), Gaps = 138/921 (14%)
Query: 1 MQKCIDKGSE---LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLR----NIYSQKVML 53
M+K I + S+ LQI+SVI + K +IYIEA K HVK+A +G+ +Y Q+ +
Sbjct: 54 MKKFIFQQSKEAPLQIKSVIVPESAKGFIYIEAFKRTHVKQAVEGINALRPGVYDQQ--M 111
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP EM DVL V L WVRMK G YK DLA+V V++ + +V VK++PRID+Q
Sbjct: 112 VPNTEMKDVLRVIKTQAALKEGMWVRMKRGIYKDDLAQVDYVEDSQNQVCVKMVPRIDMQ 171
Query: 114 ------ALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGM 167
A NK R A+ PP + N D R I E D GD+ G
Sbjct: 172 KFRGFRASENKSRSRANAR-----PPQKLFNEDNIRA--IGGEFTND---GDFLIFEGAR 221
Query: 168 LFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKG 227
+ G+LYKT+ M I + ++PT ELEKF + D + + + +F G
Sbjct: 222 YSRKGYLYKTLKMDLIQIEGVKPTLSELEKFEDDPNRADVDFDPMGN--KSGRSHNFAPG 279
Query: 228 DAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSG 287
D VIV +G+L L+G + + + + P+ + L + L + EL K F+ G+HVKV++G
Sbjct: 280 DMVIVSEGELAYLEGRIISISGNKITMMPKHEDLKEALEFPANELRKLFKVGDHVKVITG 339
Query: 288 TQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLD 347
TG+V++VE++V+++ SDTT +++V +D+ +E ++G+ K+G ++L D+V +D
Sbjct: 340 RYEDETGLVVRVEENVVVVFSDTTMHELKVRPEDLQACTEKSSGVDKMGKFKLGDMVQID 399
Query: 348 NNSFGVIIRVESEAFQVL--KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDV 405
+ GVI+R+E EAFQ+L +G +R A ++ R + + D ++N + D
Sbjct: 400 AQNVGVIVRLEKEAFQILNQRGKQERFRSATIQRR----RDSHNAVALDGDQNPIRRNDK 455
Query: 406 VRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDA 465
V++++GP GK G V+H+YRG FI++R H++ G A++ + G N A
Sbjct: 456 VKVIDGPHVGKDGEVKHLYRGNCFIYNRKHIDSGGMFVARARHLSLAGS-------NSGA 508
Query: 466 YSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRG-GHDA--------LVGTTVKVRLG 516
+ N + PRI QSP R G P GR G+G G A ++G T+++ G
Sbjct: 509 LAS-NIVPMSPRIAQSPQRNDGGSTP--GRGTPGKGPGASAQRSQRDTKMIGQTIRIIKG 565
Query: 517 PYKGYRGRVVDVKGQSVRVELESQ-MKVVTVDRSMISDNVVV-------STPYRDTPRYG 568
PYKG+ G V D ++EL S K +TV ++ + STP+ TP +
Sbjct: 566 PYKGHIGIVRDATPNDCQIELHSDCFKHITVKKANLKHVDSRGRGPGGNSTPFGRTPAH- 624
Query: 569 MGSETPMHP---SRTPLHPYMTP---------MRDAGATPIHDGMRTPM-RDRAWNPYTP 615
GS TP + SRTP + TP D G TP +DG RTP + WN
Sbjct: 625 -GSHTPAYHNSGSRTPAYGASTPRADGSRTPSQWDGGRTPQYDGSRTPRGGENPWNSKVA 683
Query: 616 MSPPRDNWED-----GNPGS--------WGTSPQYQPGSP-------PSRAYEAPTPGSG 655
+P D + D G PG+ + SPQY P +P P +P+PG
Sbjct: 684 NTPRDDGFGDSFDTPGTPGTPYESRQSDYAPSPQYAPQTPSYDQSSTPYSMNPSPSPGPY 743
Query: 656 WAS-TPGGNYSDAGTPRDSSSTYVNAPSPYLPS-TPGGQPMTPNSASYLPGTPGGQPMTP 713
+ TP Y AG P S +VN S Y P+ +PGG +P+ ++ P +P
Sbjct: 744 SDTITPSPAYGSAG-PTPSPGYFVNKKSIYKPTPSPGGYDASPSPNAFTPMN-----YSP 797
Query: 714 GTGGLDAMSPVIGAD----NEGPWFMPDILVR------RSGEESVVGVIREV-------- 755
G MSP+ G N W DI V + G+I+ +
Sbjct: 798 G------MSPMFGQGDGNINNVDWHSEDIEVSIKDSHDDASHRGKTGIIKTISGHVSSVW 851
Query: 756 LPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGI 815
+PD V +G+ + + + P+K K+K++ G +G TG+LI +DG DGI
Sbjct: 852 VPDLDQTVSVGN-----------DNLSPIQPQKNHKVKVLHGDDQGHTGELISIDGNDGI 900
Query: 816 VKVDVSLDVKILDMAILAKLA 836
V++D +KIL + L K+
Sbjct: 901 VRMDADQQLKILQLKFLGKIG 921
>gi|345309762|ref|XP_003428879.1| PREDICTED: transcription elongation factor SPT5 isoform 2
[Ornithorhynchus anatinus]
Length = 878
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 235/688 (34%), Positives = 374/688 (54%), Gaps = 44/688 (6%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 205 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQ--MVPIKEMTDVLKVV 262
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ +A
Sbjct: 263 KEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWLA 322
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 323 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 377
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + T ++ +F GD V V +G+L NL+G +
Sbjct: 378 TEGVKPTLSELEKFEDQPEGIDLEVVTEGT--GKEREHNFQPGDNVEVCEGELINLQGKI 435
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 436 LSVDGSKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 495
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 496 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 555
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 556 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 612
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRI--PQS 481
+RG F+H + +E+ G K+ V+ GGS+ R+ ++ PRI P
Sbjct: 613 FRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKP---RDVTNFTVGGFAPMSPRISSPMH 669
Query: 482 PG-----RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVE 536
P G +GG +RG + L+G TV++ GPYKGY G V D + RVE
Sbjct: 670 PSAGGQRGGFGSGGSSGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARVE 729
Query: 537 LESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHP 584
L S + ++VDR ++ + TP TP YG GS TPM+ S+TPLH
Sbjct: 730 LHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYGSGSRTPMYGSQTPLHD 789
Query: 585 YMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR--DNWEDGNPGSWGTSPQYQPGSP 642
TP+HDG RTP + AW+P P +P R + ++ G SPQ G+P
Sbjct: 790 GSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYDYGFDDEPTPSPQAYGGTP 849
Query: 643 PSRAYEAPTPGSGWASTPGGNYSDAGTP 670
+ P P S + P N GTP
Sbjct: 850 NPQTPGYPDPSSPQVN-PQYNPQTPGTP 876
>gi|195122796|ref|XP_002005897.1| GI20728 [Drosophila mojavensis]
gi|193910965|gb|EDW09832.1| GI20728 [Drosophila mojavensis]
Length = 1087
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 282/877 (32%), Positives = 432/877 (49%), Gaps = 100/877 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
LQI+S+IA + +K YIY+EA K+ HVK A + N+ K +VPI+EMTDVL V +
Sbjct: 255 LQIKSIIAPEGVKGYIYLEAYKQTHVKTAIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKE 314
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
+ L WVR+K G YK D+A+V VD + +V +KL+PRID L L E +
Sbjct: 315 QVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRLRGALRTTATESDD 374
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK PP + + + R + V GD+ G + GFLYK +M +I
Sbjct: 375 GKRKKKRRPPAKPFDPEAVRAIGGEVHS-----DGDFLLFEGNRYSRKGFLYKNFTMSAI 429
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
++ ++PT ELE+F E E ++ ++++ + H F GD V V GDL+NL+
Sbjct: 430 LSEGVKPTLAELERFEEAPE--EVNLEIMASVKDDPTAAHSFSMGDNVEVCVGDLENLQA 487
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + + P+ + L L + EL KYF+ G+H +V++G G TG++++VE
Sbjct: 488 KIVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLIIRVEPS 547
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++SD T ++ V D+ S+V TG+ +G ++ DLV LD+ + GVI+R+E E F
Sbjct: 548 RVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDLVQLDSQNVGVIVRLERENF 607
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
VL K + +P AL K RE + + D ++N + +D+V+++EGP G+ G
Sbjct: 608 HVLGMNGKCIECKP-TALHKRRE-----NQNTVALDADQNQIRRRDIVKVMEGPHAGRSG 661
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL----RT 474
++H+YR + F+H R + E+ G K+ + GGS++N S N+L
Sbjct: 662 EIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKSN-------VSNPNTLGGLGFM 714
Query: 475 PPRI--PQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
PRI P P + G G R D L+G T+K+ GPYKG G V D
Sbjct: 715 SPRIQSPMHPSGGRGARGGSRGGRGGFRVTRDRELLGKTIKICGGPYKGAVGIVKDATES 774
Query: 532 SVRVELESQMKVVTVDRSMISDNVVVSTP--------YRDTPRY--GMGSETPMHP---S 578
+ RVEL + + ++VDR+ I V+V P Y TP G G++TP + S
Sbjct: 775 TARVELHTSCQTISVDRNHI---VIVGEPGKEGSVSTYGRTPARTPGYGAQTPSYTAAGS 831
Query: 579 RTPLHPYMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW 631
+TPL TP D TP HDG TP R AW+P +P R+ D +
Sbjct: 832 KTPLVGSQTPNWDTDTRTPYGTMTPSHDGSMTP-RHGAWDPTANTTPARNTDFDYSLEEP 890
Query: 632 GTSPQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST---YVNAPSP-- 683
SP Y P +P S + TPG+ + S + + S Y+N PSP
Sbjct: 891 SPSPGYNPSTPGYQMSSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMNTPSPST 950
Query: 684 YLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRS 743
Y P+TPGG P +P Y P TPG LD+ G W DI VR
Sbjct: 951 YSPNTPGGVPQSP----YNPQTPG--------ASLDSTM--------GDWCTTDIEVRIH 990
Query: 744 GEESV-----VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGP 798
+ G+IR V +G C V L +++ + + VPP D+ K++ G
Sbjct: 991 THDDTDLVGQTGIIRTV-SNGVCSVFLRQEDR--SVSIVSEHLAPVPPNSGDEFKVIYGE 1047
Query: 799 HRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
R + GK++ D +V ++ +VK+L + L K+
Sbjct: 1048 ERESVGKVLSKQEGDVLV-CKINDEVKMLPVNHLCKM 1083
>gi|149432867|ref|XP_001513022.1| PREDICTED: transcription elongation factor SPT5 isoform 1
[Ornithorhynchus anatinus]
Length = 882
Score = 351 bits (901), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 235/688 (34%), Positives = 374/688 (54%), Gaps = 44/688 (6%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 209 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRMGYWNQQ--MVPIKEMTDVLKVV 266
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ +A
Sbjct: 267 KEVTNLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWLA 326
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 327 KRKKFKRPPQRLFDAEKIRSLGGDVAS-----DGDFLIFEGNRYSRKGFLFKSFAMSAVI 381
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ ++PT ELEKF E + ++ + T ++ +F GD V V +G+L NL+G +
Sbjct: 382 TEGVKPTLSELEKFEDQPEGIDLEVVTEGT--GKEREHNFQPGDNVEVCEGELINLQGKI 439
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
VD + I P+ + L L ++EL KYF+ G+HVKV++G G TG++++VE++ +
Sbjct: 440 LSVDGSKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFV 499
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R+E E FQV
Sbjct: 500 ILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQV 559
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L +V V+ + + K + + V D +N + VKD+V++++GP G++G + H+
Sbjct: 560 LNMY---GKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHL 616
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRI--PQS 481
+RG F+H + +E+ G K+ V+ GGS+ R+ ++ PRI P
Sbjct: 617 FRGFAFLHCKKLVENGGMFVCKTRHLVLAGGSKP---RDVTNFTVGGFAPMSPRISSPMH 673
Query: 482 PG-----RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVE 536
P G +GG +RG + L+G TV++ GPYKGY G V D + RVE
Sbjct: 674 PSAGGQRGGFGSGGSSGGMSRGRGRRDNDLIGQTVRISQGPYKGYIGVVKDATESTARVE 733
Query: 537 LESQMKVVTVDRSMIS----------DNVVVSTPY--RDTPRYGMGSETPMHPSRTPLHP 584
L S + ++VDR ++ + TP TP YG GS TPM+ S+TPLH
Sbjct: 734 LHSTCQTISVDRQRLTTVGSRRPGGMTSAYGRTPMYGSQTPMYGSGSRTPMYGSQTPLHD 793
Query: 585 YMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR--DNWEDGNPGSWGTSPQYQPGSP 642
TP+HDG RTP + AW+P P +P R + ++ G SPQ G+P
Sbjct: 794 GSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYDYGFDDEPTPSPQAYGGTP 853
Query: 643 PSRAYEAPTPGSGWASTPGGNYSDAGTP 670
+ P P S + P N GTP
Sbjct: 854 NPQTPGYPDPSSPQVN-PQYNPQTPGTP 880
>gi|195382455|ref|XP_002049945.1| GJ20465 [Drosophila virilis]
gi|194144742|gb|EDW61138.1| GJ20465 [Drosophila virilis]
Length = 1085
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 280/877 (31%), Positives = 432/877 (49%), Gaps = 100/877 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
LQI+S+IA + +K YIY+EA K+ HVK A + N+ K +VPI+EMTDVL V +
Sbjct: 253 LQIKSIIAPEGVKGYIYLEAYKQTHVKTAIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKE 312
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
+ L WVR+K G YK D+A+V VD + +V +KL+PRID + L E +
Sbjct: 313 QVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGALRTTATESDD 372
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK PP + + + R + V GD+ G + GFLYK +M +I
Sbjct: 373 GKRKKKRRPPAKPFDPEAVRAIGGEVHS-----DGDFLLFEGNRYSRKGFLYKNFTMSAI 427
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
++ ++PT ELE+F E E ++ ++++ + H F GD V V GDL+NL+
Sbjct: 428 LSEGVKPTLAELERFEEAPE--EVNLEIMASVKDDPTAAHSFSMGDNVEVCVGDLENLQA 485
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + + P+ + L L + EL KYF+ G+H +V++G G TG++++VE
Sbjct: 486 KIVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLIIRVEPS 545
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++SD T ++ V D+ S+V TG+ +G ++ DLV LD+ + GVI+R+E E F
Sbjct: 546 RVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDLVQLDSQNVGVIVRLERENF 605
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
VL K + +P AL K RE + + D ++N + +D+V+++EGP G+ G
Sbjct: 606 HVLGMNGKCIECKP-TALHKRRE-----NQNTVALDADQNQIRRRDIVKVMEGPHAGRSG 659
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL----RT 474
++H+YR + F+H R + E+ G K+ + GGS+ N S N+L
Sbjct: 660 EIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTN-------VSNANTLGGLGFM 712
Query: 475 PPRI--PQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
PRI P P + G G R D L+G T+K+ GPYKG G V D
Sbjct: 713 SPRIQSPMHPSGGRGARGGSRGGRGGFRVTRDRELLGKTIKICGGPYKGAVGIVKDATES 772
Query: 532 SVRVELESQMKVVTVDRSMISDNVVVSTP--------YRDTPRY--GMGSETPMHP---S 578
+ RVEL + + ++VDR+ I V+V P Y TP G G++TP + S
Sbjct: 773 TARVELHTSCQTISVDRNHI---VIVGEPGKEGSVSTYGRTPARTPGYGAQTPSYTAAGS 829
Query: 579 RTPLHPYMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW 631
+TPL TP D TP HDG TP R AW+P +P R+ D +
Sbjct: 830 KTPLVGSQTPNWDTDTRTPYGTMTPSHDGSMTP-RHGAWDPTANTTPARNTDFDYSLEEP 888
Query: 632 GTSPQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST---YVNAPSP-- 683
SP Y P +P S + TPG+ + S + + S Y+N PSP
Sbjct: 889 SPSPGYNPSTPGYQMSSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMNTPSPST 948
Query: 684 YLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRS 743
Y P+TPGG P +P Y P TPG LD+ + G W DI VR
Sbjct: 949 YSPNTPGGVPQSP----YNPQTPGAS--------LDS--------SMGDWCTTDIEVRIH 988
Query: 744 GEESV-----VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGP 798
+ G+IR V +G C V L +++ + + VPP D+ K++ G
Sbjct: 989 THDDTDLVGQTGIIRTV-SNGVCSVFLRQEDR--SVSIVSEHLAPVPPNSGDEFKVIYGE 1045
Query: 799 HRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
R + GK++ D +V ++ +VK++ + L K+
Sbjct: 1046 ERESVGKVLSKQEGDVLV-CKINDEVKMIPVNHLCKM 1081
>gi|194753156|ref|XP_001958883.1| GF12341 [Drosophila ananassae]
gi|190620181|gb|EDV35705.1| GF12341 [Drosophila ananassae]
Length = 1081
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 278/874 (31%), Positives = 430/874 (49%), Gaps = 94/874 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
LQI+S++A + +K YIY+EA K+ HVK A + N+ K +VPI+EMTDVL V +
Sbjct: 249 LQIKSIVAPEGVKGYIYLEAYKQTHVKTAIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKE 308
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
+ L WVR+K G YK D+A+V VD + +V +KL+PRID + L E +
Sbjct: 309 QVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGALRTTATESDD 368
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK PP + + + R + V GD+ G + GFLYK +M +I
Sbjct: 369 SKRKKKRRPPAKPFDPEAVRAIGGEVHS-----DGDFLLFEGNRYSRKGFLYKNFNMSAI 423
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
+ ++PT ELE+F E E ++ + T + H F GD V V GDL+NL+
Sbjct: 424 LSDGVKPTLAELERFEESPE--EVNLEIMGTAKDDPTSAHSFSMGDNVEVCVGDLENLQA 481
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + + P+ + L L + EL KYF+ G+H +V++G G TG++++VE
Sbjct: 482 KIVAIDGTMITVMPKHQDLKDPLIFKALELRKYFKTGDHARVLAGRYEGETGLIIRVEPS 541
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++SD T ++ V D+ S+V TG+ +G ++ DLV LD+ + GVI+R+E E F
Sbjct: 542 RVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDLVQLDSQNVGVIVRLERENF 601
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
VL K + +P AL K RE + + D ++N + +D+V+++EGP G+ G
Sbjct: 602 HVLGMNGKCIECKP-TALHKRRE-----NRNTVALDADQNQIRRRDIVKVMEGPHAGRSG 655
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR-FNSLRTPPR 477
++H+YR + F+H R + E+ G K+ + GGS+ N + G F S PR
Sbjct: 656 EIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTNVNNAGTLGGLGFMS----PR 711
Query: 478 I--PQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
I P P A G G R D ++G T+K+ GPYKG G V D + R
Sbjct: 712 IQSPMHPSGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDATESTAR 771
Query: 535 VELESQMKVVTVDRSMISDNVVVSTP--------YRDTPRY--GMGSETPMHP---SRTP 581
VEL + + ++VDR+ I+ +V P Y TP G G++TP + S+TP
Sbjct: 772 VELHTSCQTISVDRNHIA---IVGVPGKEGSVSTYGRTPARTPGYGAQTPSYTAAGSKTP 828
Query: 582 LHPYMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTS 634
L TP D TP HDG TP R AW+P +P R+N D + S
Sbjct: 829 LVGSQTPNWDTDTRTPYGTMTPSHDGSMTP-RHGAWDPTANTTPARNNEFDYSLEEPSPS 887
Query: 635 PQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST---YVNAPSP--YLP 686
P Y P +P + + TPG+ + S + + S Y+N PSP Y P
Sbjct: 888 PGYNPSTPGYQMTSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMNTPSPSTYSP 947
Query: 687 STPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGEE 746
+TPGG P +P Y P TPG LD+ + G W DI VR +
Sbjct: 948 NTPGGIPQSP----YNPQTPGAS--------LDS--------SMGDWCTTDIEVRIHTHD 987
Query: 747 SV-----VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRG 801
G+IR V +G C V L +++ + + VPP D+ K++ G R
Sbjct: 988 DTDLVGQTGIIRTV-SNGVCSVFLRQEDR--SVSIVSEHLAPVPPNSGDEFKVIYGEERE 1044
Query: 802 ATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+ G+++ D +V ++ +VK++ + L K+
Sbjct: 1045 SVGRVLAKQEGDVLV-CKINDEVKMIPVNHLCKM 1077
>gi|195487144|ref|XP_002091785.1| GE12049 [Drosophila yakuba]
gi|194177886|gb|EDW91497.1| GE12049 [Drosophila yakuba]
Length = 1079
Score = 350 bits (897), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 279/871 (32%), Positives = 429/871 (49%), Gaps = 88/871 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
LQI+S+IA + +K YIY+EA K+ HVK + N+ K +VPI+EMTDVL V +
Sbjct: 247 LQIKSIIAPEGVKGYIYLEAYKQTHVKTCIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKE 306
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
+ L WVR+K G YK D+A+V VD + +V +KL+PRID + L E +
Sbjct: 307 QVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGALRTTATESDD 366
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK P + + + R + V GD+ G + GFLYK +M +I
Sbjct: 367 SKRKKKRRPAAKTFDPEAVRAIGGEVHS-----DGDFLLFEGNRYSRKGFLYKNFTMSAI 421
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
+ ++PT ELE+F E E ++ + T+ + H F GD V V GDL+NL+
Sbjct: 422 LSDGVKPTLAELERFEESPE--EVNLEIMGTVKDDPTSAHSFSMGDNVEVCVGDLENLQA 479
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + + P+ + L L + EL KYF+ G+H +V++G G TG++++VE
Sbjct: 480 KIVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLIIRVEPT 539
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++SD T ++ V D+ S+V TG+ +G ++ DLV LD+ + GVI+R+E E F
Sbjct: 540 RVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDLVQLDSQNVGVIVRLERENF 599
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
VL K + +P AL K RE + + D ++N + +D+V+++EGP G+ G
Sbjct: 600 HVLGMNGKCIECKP-TALHKRRE-----NRNTVALDADQNQIRRRDIVKVMEGPHAGRSG 653
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR-FNSLRTPPR 477
++H+YR + F+H R + E+ G K+ + GGS+ N + G F S PR
Sbjct: 654 EIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTNVNNAGTLGGLGFMS----PR 709
Query: 478 I--PQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
I P P A G G R D ++G T+K+ GPYKG G V D + R
Sbjct: 710 IQSPMHPSGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDATESTAR 769
Query: 535 VELESQMKVVTVDRSMISDNVV------VSTPYRDTPRY-GMGSETPMHP---SRTPLHP 584
VEL + + ++VDR+ I+ V VST R R G G++TP + S+TPL
Sbjct: 770 VELHTSCQTISVDRNHIAIVGVTGKEGSVSTYGRTPARTPGYGAQTPSYTAAGSKTPLVG 829
Query: 585 YMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY 637
TP D TP HDG TP R AW+P +P R+N D + SP Y
Sbjct: 830 SQTPNWDTDTRTPYGTMTPSHDGSMTP-RHGAWDPTANTTPARNNDFDYSLEEPSPSPGY 888
Query: 638 QPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST---YVNAPSP--YLPSTP 689
P +P S + TPG+ + S + + S Y+N PSP Y P+TP
Sbjct: 889 NPSTPGYQMSSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMNTPSPSTYSPNTP 948
Query: 690 GGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGEESV- 748
GG P +P Y P TPG LD+ + G W DI VR +
Sbjct: 949 GGIPQSP----YNPQTPGAS--------LDS--------SMGDWCTTDIEVRIHTHDDTD 988
Query: 749 ----VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATG 804
G+IR V +G C V L +++ + + VPP D+ K++ G R + G
Sbjct: 989 LVGQTGIIRTV-SNGVCSVFLRQEDR--SVSIVSEHLAPVPPNSGDEFKVIYGEERESVG 1045
Query: 805 KLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+++ D +V ++ +VK++ + L K+
Sbjct: 1046 RVLSKQEGDVLV-CKINDEVKMIPVNHLCKM 1075
>gi|195431569|ref|XP_002063809.1| GK15869 [Drosophila willistoni]
gi|194159894|gb|EDW74795.1| GK15869 [Drosophila willistoni]
Length = 1082
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 279/874 (31%), Positives = 433/874 (49%), Gaps = 94/874 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
LQI+S++A + +K YIY+E+ K+ HVK A + N+ K +VPI+EMTDVL V +
Sbjct: 250 LQIKSIVAPEGVKGYIYLESYKQTHVKTAIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKE 309
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
+ L + WVR+K G YK D+A+V VD + +V +KL+PRID + L E +
Sbjct: 310 QVGLKQKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGALRTTATESDD 369
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK P + + + R + V GD+ G + GFLYK +M +I
Sbjct: 370 AKRKKKRRPAAKPFDPEAVRAIGGEVHS-----DGDFLLFEGNRYSRKGFLYKNFTMSAI 424
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
+ ++PT ELE+F E E ++ + T+ + H F GD V V GDL+NL+
Sbjct: 425 LSDGVKPTLAELERFEESPE--EVNLEIMGTMKDDPTSVHSFSMGDNVEVCVGDLENLQA 482
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + + P+ + L L + EL KYF+ G+H +V++G G TG++++VE
Sbjct: 483 KIVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLIIRVEPS 542
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++SD T ++ V D+ S+V TG+ +G ++ DLV LD+ + GVI+R+E E F
Sbjct: 543 RVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDLVQLDSQNVGVIVRLERENF 602
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
VL K + +P AL K RE + + D ++N + +D+V+++EGP G+ G
Sbjct: 603 HVLGMNGKCIECKP-TALHKRRE-----NRNTVALDADQNQIRRRDIVKVMEGPHAGRSG 656
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR-FNSLRTPPR 477
++H+YR + F+H R + E+ G K+ + GGS+ N + G+ F S PR
Sbjct: 657 EIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTNVNNAGNLGGLGFMS----PR 712
Query: 478 I--PQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
I P P G A G G R D ++G T+K+ GPYKG G V D + R
Sbjct: 713 IQSPMHPSGGRGGRGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDATESTAR 772
Query: 535 VELESQMKVVTVDRSMISDNVVVSTP--------YRDTPRY--GMGSETPMHP---SRTP 581
VEL + + ++VDR+ I+ +V P Y TP G G++TP + S+TP
Sbjct: 773 VELHTSCQTISVDRNHIA---IVGVPGKEGSVSTYGRTPARTPGYGAQTPSYTAGGSKTP 829
Query: 582 LHPYMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTS 634
L TP D+ TP HDG TP R AW+P +P R+ D + S
Sbjct: 830 LVGSQTPNWDSDTRTPYGTMTPSHDGSMTP-RHGAWDPTANTTPARNADFDYSLEEPSPS 888
Query: 635 PQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST---YVNAPSP--YLP 686
P Y P +P + + TPG+ + S + + S Y+N PSP Y P
Sbjct: 889 PGYNPSTPGYQMTSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPFPVGYMNTPSPSTYSP 948
Query: 687 STPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGEE 746
+TPGG P +P Y P TPG LD+ + G W DI VR +
Sbjct: 949 NTPGGIPQSP----YNPQTPGAS--------LDS--------SMGDWCTTDIEVRIHTHD 988
Query: 747 SV-----VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRG 801
GVIR V +G C V L +++ + + VPP D+ K++ G R
Sbjct: 989 DTDLVGQTGVIRTV-SNGVCSVFLRQEDR--SVSIVSEHLAPVPPNSGDEFKVIYGEDRE 1045
Query: 802 ATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+ GK++ D +V V+ +VK++ + L K+
Sbjct: 1046 SVGKVLSKQEGDVLV-CKVNDEVKMIPINHLCKM 1078
>gi|195584876|ref|XP_002082230.1| GD11454 [Drosophila simulans]
gi|194194239|gb|EDX07815.1| GD11454 [Drosophila simulans]
Length = 881
Score = 348 bits (892), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 278/871 (31%), Positives = 429/871 (49%), Gaps = 89/871 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
LQI+S+IA + +K YIY+EA K+ HVK + N+ K +VPI+EMTDVL V +
Sbjct: 50 LQIKSIIAPEGVKGYIYLEAYKQTHVKTCIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKE 109
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
+ L WVR+K G YK D+A+V VD + +V +KL+PRID + L E +
Sbjct: 110 QVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGALRTTATESDD 169
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK P + + + R + V GD+ G + GFLYK +M +I
Sbjct: 170 NKRKKKRRPAAKPFDPEAVRAIGGEVHS-----DGDFLLFEGNRYSRKGFLYKNFTMSAI 224
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
+ ++PT ELE+F E E ++ + T+ + H F GD V V GDL+NL+
Sbjct: 225 LSDGVKPTLAELERFEESPE--EVNLEIMGTVKDDPTMAHSFSMGDNVEVCVGDLENLQA 282
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + + P+ + L L + EL KYF+ G+H +V++G G TG++++VE
Sbjct: 283 KIVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLIIRVEPT 342
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++SD T ++ V D+ S+V TG+ +G ++ D+V LD+ + GVI+R+E E F
Sbjct: 343 RVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDMVQLDSQNVGVIVRLERENF 402
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
VL K + +P AL K +E + + D ++N + +DVV+++EGP G+ G
Sbjct: 403 HVLGMNGKCIECKP-TALHKRKE-----NRHTVALDADQNQIRRRDVVKVMEGPHAGRSG 456
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR-FNSLRTPPR 477
++H+YR + F+H R + E+ G K+ + GGS+ N + G F S PR
Sbjct: 457 EIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTNVNNAGMVGGLGFMS----PR 512
Query: 478 I--PQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
I P P A G G R D ++G T+K+ GPYKG G V D + R
Sbjct: 513 IQSPMHPSAGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDATESTAR 572
Query: 535 VELESQMKVVTVDRSMISDNVV------VSTPYRDTPRY-GMGSETPMHP---SRTPLHP 584
VEL + + ++VDR+ I+ V VST R R G G++TP + S+TPL
Sbjct: 573 VELHTSCQTISVDRNHIAIVGVTGKEGSVSTYGRTPARTPGYGAQTPSYTAAGSKTPLVG 632
Query: 585 YMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY 637
TP D TP HDG TP R AW+P +P R+N D + SP Y
Sbjct: 633 SQTPNWDTDTRTPYGTMTPSHDGSMTP-RHGAWDPTANTTPARNNDFDYSLEEPSPSPGY 691
Query: 638 QPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST---YVNAPSP--YLPSTP 689
P +P + + TPG+ + S + + S Y+N PSP Y P+TP
Sbjct: 692 NPSTPGYQMTSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMNTPSPSTYSPNTP 751
Query: 690 GGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGEESV- 748
GG P +P Y P TPG LD+ + G W DI VR +
Sbjct: 752 GGIPQSP----YNPQTPGAS--------LDS--------SMGDWCTTDIEVRIHTHDDTD 791
Query: 749 ----VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATG 804
G+IR V +G C V L +++ + + V P D+ KI+ G R + G
Sbjct: 792 LVGQTGIIRTV-SNGVCSVFLRQEDR--SVSIVSEHLAPVLPSNGDEFKIIYGDDRESVG 848
Query: 805 KLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+++ DG + +++ D+K+L + L K+
Sbjct: 849 RVLSKDGDVFVCRINE--DIKLLPINFLCKM 877
>gi|194881346|ref|XP_001974809.1| GG21970 [Drosophila erecta]
gi|190657996|gb|EDV55209.1| GG21970 [Drosophila erecta]
Length = 1078
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 278/871 (31%), Positives = 429/871 (49%), Gaps = 88/871 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
LQI+S+IA + +K YIY+EA K+ HVK + N+ K +VPI+EMTDVL V +
Sbjct: 246 LQIKSIIAPEGVKGYIYLEAYKQTHVKTCIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKE 305
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
+ L WVR+K G YK D+A+V VD + +V +KL+PRID + L E +
Sbjct: 306 QVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGALRTTATESDD 365
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK P + + + R + V GD+ G + GFLYK +M +I
Sbjct: 366 SKRKKKRRPAAKTFDPEAVRAIGGEVHS-----DGDFLLFEGNRYSRKGFLYKNFTMSAI 420
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
+ ++PT ELE+F E E ++ + T+ + H F GD V V GDL+NL+
Sbjct: 421 LSDGVKPTLAELERFEESPE--EVNLEIMGTVKDDPTSAHSFSMGDNVEVCVGDLENLQA 478
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + + P+ + L L + EL KYF+ G+H +V++G G TG++++VE
Sbjct: 479 KIVAIDGTMITVMPKHQDLKDPLIFKAIELRKYFKTGDHARVLAGRYEGETGLIIRVEPT 538
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++SD T ++ V D+ S+V TG+ +G ++ DLV LD+ + GVI+R+E E F
Sbjct: 539 RVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDLVQLDSQNVGVIVRLERENF 598
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
VL K + +P AL K RE + + D ++N + +D+V+++EGP G+ G
Sbjct: 599 HVLGMNGKCIECKP-TALHKRRE-----NRNTVALDADQNQIRRRDIVKVMEGPHAGRSG 652
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR-FNSLRTPPR 477
++H+YR + F+H R + E+ G K+ + GGS+ N + G F S PR
Sbjct: 653 EIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTNVNNAGTLGGLGFMS----PR 708
Query: 478 I--PQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
I P P A G G R D ++G T+K+ GPYKG G V D + R
Sbjct: 709 IQSPMHPSGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGSVGIVKDATESTAR 768
Query: 535 VELESQMKVVTVDRSMISDNVV------VSTPYRDTPRY-GMGSETPMHP---SRTPLHP 584
VEL + + ++VDR+ I+ V VST R R G G++TP + S+TPL
Sbjct: 769 VELHTSCQTISVDRNHIAIVGVTGKEGSVSTYGRTPARTPGYGAQTPSYTAAGSKTPLVG 828
Query: 585 YMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY 637
TP D TP HDG TP R AW+P +P R+N D + SP Y
Sbjct: 829 SQTPNWDTDTRTPYGTMTPSHDGSMTP-RHGAWDPTANTTPARNNDFDYSLEEPSPSPGY 887
Query: 638 QPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST---YVNAPSP--YLPSTP 689
P +P + + TPG+ + S + + S Y+N PSP Y P+TP
Sbjct: 888 NPSTPGYQMTSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMNTPSPSTYSPNTP 947
Query: 690 GGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGEESV- 748
GG P +P Y P TPG LD+ + G W DI VR +
Sbjct: 948 GGIPQSP----YNPQTPGAS--------LDS--------SMGDWCTTDIEVRIHTHDDTD 987
Query: 749 ----VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATG 804
G+IR V +G C V L +++ + + VPP D+ K++ G R + G
Sbjct: 988 LVGQTGIIRTV-SNGVCSVFLRQEDR--SVSIVSEHLAPVPPNSGDEFKVIYGEERESVG 1044
Query: 805 KLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+++ D +V ++ +VK++ + L K+
Sbjct: 1045 RVLSKQEGDVLV-CKINDEVKMIPVNHLCKM 1074
>gi|427796899|gb|JAA63901.1| Putative rna polymerase ii transcription elongation factor
dsif/supt5h/spt5, partial [Rhipicephalus pulchellus]
Length = 984
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 229/653 (35%), Positives = 357/653 (54%), Gaps = 62/653 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQIRSV+A + +K Y+YIEA K HVK+ +G+ N+ Y Q M+VPI+EMTDVL V
Sbjct: 129 LQIRSVVAPEGVKGYVYIEAYKHTHVKQCIQGIGNLRIGLYQQ--MMVPIKEMTDVLRVT 186
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID-------LQALANKL 119
+ L WVR+K G Y+ DLA+V VD + +V +KL+PR+D L++ +N+
Sbjct: 187 REQAQLRPKQWVRLKRGIYRDDLAQVDYVDTAQGQVNLKLLPRVDYTRPRGALRSASNEP 246
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
E R+ +K+ P + +VD R + V GD+ G + GFLYK +
Sbjct: 247 EKRKKSKR----PAAKLFDVDAIRAVGGEVT-----TDGDFLIFEGNRYSRKGFLYKAFA 297
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLK 238
+I A ++PT ELEKF E E ++ ++GH F GD V V +G+L
Sbjct: 298 TSAIIADGVKPTLSELEKFEEQPEGLELELGETR----KEEQGHSFAPGDNVEVAEGELV 353
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
+L+G + +D + + P+ + L L + EL KYF+ G+HVKV++G G TG++++
Sbjct: 354 HLQGKIISIDGNKITMLPKHEDLTDPLDFQAHELKKYFKMGDHVKVIAGRFEGDTGLIVR 413
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
VE +++++ SD T +++V D+ +++ TG+ +G ++ DLV LD + GVI+R+E
Sbjct: 414 VEDNMVVLFSDLTMHELKVLPRDLQLCADMATGVDSLGQFQWGDLVQLDPQTVGVIVRLE 473
Query: 359 SEAFQVLKGVPDRPEVALVKLREIKCKLE-KKSNVQDRNKNTVAVKDVVRIVEGPCKGKQ 417
E FQVL ++ VK + + K + +K+ D ++N + V+D+V++++GP G+Q
Sbjct: 474 KENFQVLNM---HGKLVQVKHQSVTKKCDARKAVALDSDQNQIQVRDIVKVIDGPHSGRQ 530
Query: 418 GPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPR 477
G V+HI+R F+H R LE+ G K+ ++ G +R + G A + L PR
Sbjct: 531 GDVKHIFRNFAFLHSRMMLENGGIFVCKTRHLLLAGSTRQS---TGPAMGGYTPLS--PR 585
Query: 478 I--PQSPGRYSRGGPPAGGRNRGGRGGH-----DALVGTTVKVRLGPYKGYRGRVVDVKG 530
I P P GG GG GG G L+G T+K+ GPYKG+ G V D
Sbjct: 586 ISSPMHPSGGGGGGGRGGGFGGGGGRGRGGRRDSELIGQTIKITQGPYKGHIGIVKDATE 645
Query: 531 QSVRVELESQMKVVTVDRSMIS-------DNVVVSTPYRDTPRYGMGSETPMHP--SRTP 581
+ RVEL ++ + ++VDR+ IS + Y TP YG GS+TPM+ SRTP
Sbjct: 646 TTARVELHTKCQTISVDRTRISVVGSASKGGSGGVSTYNRTPMYGSGSQTPMYQSGSRTP 705
Query: 582 LHPYMTPMRDAGA---------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWED 625
++ TP+ +AG+ TP+HDG RTP+ AW+P +P R +D
Sbjct: 706 MYGSQTPLYEAGSRTPHFGGGQTPLHDGSRTPVHG-AWDPTASNTPARTELDD 757
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/214 (35%), Positives = 108/214 (50%), Gaps = 29/214 (13%)
Query: 511 VKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS-------DNVVVSTPYRD 563
+K+ GPYKG+ G V D + RVEL ++ + ++VDR+ IS + Y
Sbjct: 763 IKITQGPYKGHIGIVKDATETTARVELHTKCQTISVDRTRISVVGSASKGGSGGVSTYNR 822
Query: 564 TPRYGMGSETPMHP--SRTPLHPYMTPMRDAGA---------TPIHDGMRTPMRDRAWNP 612
TP YG GS+TPM+ SRTP++ TP+ +AG+ TP+HDG RTP+ AW+P
Sbjct: 823 TPMYGSGSQTPMYQSGSRTPMYGSQTPLYEAGSRTPHFGGGQTPLHDGSRTPVHG-AWDP 881
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
+P R +D SP YQP +P +A E P G TPG SD
Sbjct: 882 TASNTPARTELDDYTLDEGSPSPSYQPATPGYQAPETPQ-GPYTPQTPGMYGSD------ 934
Query: 673 SSSTYVNAPSPYLPS-TPGGQPMTPNSASYLPGT 705
+Y +P+ Y PS +P G TP+ ++ GT
Sbjct: 935 --HSYSPSPTAYQPSPSPTGYVTTPSPVTFQAGT 966
>gi|384499127|gb|EIE89618.1| hypothetical protein RO3G_14329 [Rhizopus delemar RA 99-880]
Length = 1029
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 296/922 (32%), Positives = 456/922 (49%), Gaps = 135/922 (14%)
Query: 1 MQKCIDK--GSE-LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M++ D+ GS L S A + LK YIYIEA ++AHV+EA + N+Y +MLVP++
Sbjct: 147 MKRHFDRARGSHPLDTFSAFARESLKGYIYIEAKRQAHVQEAINNIPNLYMTTLMLVPLK 206
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
+M D + V+ K +D+ WVR+K G Y GDLA+VV+V + + VK++PR+DL+ A
Sbjct: 207 DMVDAINVQKKDVDIPLGGWVRIKRGTYTGDLAQVVEVSDSQDSARVKVVPRLDLEN-AG 265
Query: 118 KLEGREVAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYK 176
+L + K+K V PPPR N + I +++ P + G ++DG+L K
Sbjct: 266 QLNDEDGKKRKKAVRPPPRLFNPERLPSRSISSLQKKGP-----YWVYNGDHYRDGYLEK 320
Query: 177 TVSMKSISAQNIQPTFDELEKF---RTPGENGES--DIASLSTLFANRKKGH---FMKGD 228
+ + + +++ PT DE+ +F GE+GE D+++LSTL N + + F GD
Sbjct: 321 YMKVAVLQLEDVNPTLDEIARFAGNEINGEDGERAIDLSTLSTLTINSNQTNNLLFQPGD 380
Query: 229 AVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGT 288
V V++GD+ + G VE V + +V + ++ G K + + +K+L K F+ G+HVKV++G
Sbjct: 381 TVSVVEGDMIHSTGIVENVLDSSVVVSLKVDGSKKRVTLPAKQLRKKFKEGDHVKVINGR 440
Query: 289 QAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDN 348
+GMV+KVE++++ +LSD T +++RVF+ D+ E+++V G T IG+YEL DLV LD
Sbjct: 441 YRDESGMVVKVEENIVTLLSDATLKEVRVFSKDLREAADVMFGKTVIGNYELHDLVQLDF 500
Query: 349 NSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE-KKSNVQDRNKNTVAVKDVVR 407
+ GVI++V+ ++F+VL E+ V+ +I K + KK+ D N N++ D V
Sbjct: 501 YTVGVIVQVDRDSFKVLT---QNGELRTVEPHQITNKRDSKKAIATDANGNSIRSGDSVI 557
Query: 408 IVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYS 467
V G + + H+YR ++F+H R H E+ G + ++ VV +R+ + D
Sbjct: 558 EVSG--DKRNCSILHLYRHLVFLHSREHSENFG-VWVTNTRSVVSATARSRPVSSMDTQK 614
Query: 468 RFNSLRTPPRIPQSPGRYSRG-----------GPPAGGRNRGGRGGHDALVGTTVKVRLG 516
F +P Y+R GG GRGG D LV TV++ G
Sbjct: 615 PF----------AAPTPYNRDARGGGRGGRGGSAGRGGFYGRGRGGRDNLVAKTVRIAQG 664
Query: 517 PYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI------------------SDNVVVS 558
P+KGY G V D S RVEL + +++ V++S + +NV +
Sbjct: 665 PHKGYIGIVKDATDDSARVELHTDCRIINVEKSKLIILDSQGNPIGQAAPSHFDNNVSSN 724
Query: 559 TPYRDTP----RYGMGSETPMHP---SRTPLHP--YMTPMRDAGA-TP---IHDGMRTPM 605
T Y T RYG G++TPM +RTP TP ++GA TP +DG RTP
Sbjct: 725 TGYSRTAATPSRYGDGAQTPMRSAAGARTPAWNSGSKTPAWNSGARTPNPYANDGGRTP- 783
Query: 606 RDRAWN--PYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGN 663
AW+ TPM W +W +S P S + ++
Sbjct: 784 ---AWDSGSKTPM------WRS---DAWSSSTSLNHDKPISATNSS-------SNHNSNR 824
Query: 664 YSDAGTPRDSSSTYVNAPSP-----------YLPSTPGGQPMTPNSASYLPGTPGG-QPM 711
Y DA P + S+ AP+P ++P TPG P A+Y GT G P
Sbjct: 825 YDDANIPPQTPSSSWIAPTPHYESVPTPGAGFIPPTPGAFMSAPTPAAYEAGTSGNFVPA 884
Query: 712 TPGTGGL--DAMSPVIG-------ADNEGPWFMPDILV---------RRSGEESVVGVIR 753
TP L P G DNE W + DI V RR S+V V
Sbjct: 885 TPAESALPQTPFMPTGGDYRYVEEVDNEEDWPIEDIEVKFIRDEGAARRGQLASIVSV-- 942
Query: 754 EVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTD 813
+++ S R V+ + I + IE P K + ++I+ G HRG G LIGVD D
Sbjct: 943 DII---SKRCVVNLYSTSEKIDIPFDCIEPARPNKKENVRIIKGEHRGELGNLIGVDAQD 999
Query: 814 GIVKVD-VSLDVKILDMAILAK 834
GIV++ + K L+M + K
Sbjct: 1000 GIVRLKGDAAGFKFLNMVTVGK 1021
>gi|198422714|ref|XP_002120024.1| PREDICTED: similar to suppressor of Ty 5 homolog [Ciona
intestinalis]
Length = 1039
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 259/785 (32%), Positives = 387/785 (49%), Gaps = 109/785 (13%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAV- 65
LQI+SV A + LK YIY+EA K+ HVK+A +G+ N+ ++QK +VP +EM DV V
Sbjct: 222 LQIKSVTAPEGLKGYIYVEAIKQTHVKQAIEGVSNLRLGYWTQK--MVPTKEMPDVFKVL 279
Query: 66 -ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREV 124
E L WVR+K G +K DLA++ ++ + +VT+KLIPRID G
Sbjct: 280 KEFDRTSLKPKMWVRLKKGVFKDDLAQIDYIEQSQNQVTLKLIPRIDYSRPRGSNRGSYD 339
Query: 125 AKKKPF--VPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKS 182
+K+ PP + +VD R + + GD+ G + GFLYK ++ +
Sbjct: 340 KEKRKLHKRPPQKLFDVDGIRAIGGEIS-----TDGDHLVFEGNRFSRKGFLYKNFTLNT 394
Query: 183 ISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKG 242
I I+PT ELEKF E + ++ + S + K F GD+V V +G+L NL+G
Sbjct: 395 ICVDGIKPTLSELEKFEEQPEGLDIELVTESG-NKSEKSSRFAPGDSVEVAEGELINLQG 453
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
V V V + P+ + L L S EL K+F G+HVKV++G G TG++++VE
Sbjct: 454 KVISVVGAKVTMMPKHEELNDPLEFLSHELRKHFNMGDHVKVIAGRYEGDTGLIVRVEPK 513
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++ SD T +++V D+ S+V++G+ +G ++ DLVL+D+ GVI+R+E E F
Sbjct: 514 MIVLFSDLTMHELKVLPRDLQLCSDVSSGVDSVGKFQFGDLVLMDSQVVGVIVRLEKEYF 573
Query: 363 QVLK---GVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
QVL V A+ + ++ + + D +N++ KD+V+++EGP G++G
Sbjct: 574 QVLSMHGKVKHMKHQAVTRRKDTRFAM-----ALDAEQNSIQCKDIVKVIEGPHMGQEGE 628
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIP 479
V+H+YRG F+ + +E+ G ++ V+ GGSR +G T P P
Sbjct: 629 VKHMYRGFAFLQSKKVIENGGIFVVRTRQVVLAGGSRVSG------------CCTNPFAP 676
Query: 480 QSPGRYSRGGPPAGGRNRGGRGGHD---------------ALVGTTVKVRLGPYKGYRGR 524
SP R G PA N + ++G TV+VR GPYKG+ G
Sbjct: 677 MSP----RIGSPARQDNDRNKQQGGQGGGGRGRGRGQRDMGIIGQTVRVRQGPYKGHIGV 732
Query: 525 VVDVKGQSVRVELESQMKVVTVDRSMISDNVV-------VSTPYRDTPRYGM------GS 571
V D + RVEL + + + VDR + S+ Y TP YG G
Sbjct: 733 VKDATESTARVELHATCQTINVDRMRLQPTDQRRPGAGGKSSTYGRTPMYGSQTPTYGGG 792
Query: 572 ETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPM-RDRAWNPY---TPMSPPRDNWEDGN 627
TPM+ S+TPLH TP+HDG RTP AW+P TP P +++ +
Sbjct: 793 RTPMYGSQTPLHDGSRTPHYGAQTPLHDGNRTPRGAGSAWDPTNANTPARPDNFDYDAAS 852
Query: 628 PGSWG---TSPQ----YQ-----PGSPPSRAYEAP---------TPGSGWASTPGGNYSD 666
P +G +PQ YQ P +P S A + P +P SG +P G+Y
Sbjct: 853 PAPYGGGTPNPQTPGGYQSDDASPATPYSNAPQTPGGYASDRTYSPYSGVTPSPLGSYEA 912
Query: 667 AGTPRDSS-STYVNAPSP---------YLPS-TPGGQPMTPNSASYLPGTPG----GQPM 711
+P SS S Y PSP Y PS +PG TP+ + YLP TP P+
Sbjct: 913 TPSPLGSSYSNYQPTPSPGDLQSSPASYQPSPSPGSYQATPSPSGYLP-TPSPLDYTSPL 971
Query: 712 TPGTG 716
TPG G
Sbjct: 972 TPGGG 976
>gi|195335874|ref|XP_002034588.1| GM21959 [Drosophila sechellia]
gi|194126558|gb|EDW48601.1| GM21959 [Drosophila sechellia]
Length = 1078
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 278/871 (31%), Positives = 428/871 (49%), Gaps = 89/871 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
LQI+S+IA + +K YIY+EA K+ HVK + N+ K +VPI+EMTDVL V +
Sbjct: 247 LQIKSIIAPEGVKGYIYLEAYKQTHVKTCIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKE 306
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
+ L WVR+K G YK D+A+V VD + +V +KL+PRID + L E +
Sbjct: 307 QVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGALRTTATESDD 366
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK P + + + R + V GD+ G + GFLYK +M +I
Sbjct: 367 NKRKKKRRPAAKPFDPEAVRAIGGEVHS-----DGDFLLFEGNRYSRKGFLYKNFTMSAI 421
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
+ ++PT ELE+F E E ++ + T+ + H F GD V V GDL+NL+
Sbjct: 422 LSDGVKPTLAELERFEESPE--EVNLEIMGTVKDDPTMAHSFSMGDNVEVCVGDLENLQA 479
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + + P+ + L L + EL KYF+ G+H +V++G G TG++++VE
Sbjct: 480 KIVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLIIRVEPT 539
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++SD T ++ V D+ S+V TG+ +G ++ D+V LD+ + GVI+R+E E F
Sbjct: 540 RVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDMVQLDSQNVGVIVRLERENF 599
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
VL K + +P AL K +E + + D ++N + +DVV+++EGP G+ G
Sbjct: 600 HVLGMNGKCIECKP-TALHKRKE-----NRHTVALDADQNQIRRRDVVKVMEGPHAGRSG 653
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR-FNSLRTPPR 477
++H+YR + F+H R + E+ G K+ + GGS+ N G F S PR
Sbjct: 654 EIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTNVSNAGMVGGLGFMS----PR 709
Query: 478 I--PQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
I P P A G G R D ++G T+K+ GPYKG G V D + R
Sbjct: 710 IQSPMHPSAGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDATESTAR 769
Query: 535 VELESQMKVVTVDRSMISDNVV------VSTPYRDTPRY-GMGSETPMHP---SRTPLHP 584
VEL + + ++VDR+ I+ V VST R R G G++TP + S+TPL
Sbjct: 770 VELHTSCQTISVDRNHIAIVGVTGKEGSVSTYGRTPARTPGYGAQTPSYTAAGSKTPLVG 829
Query: 585 YMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY 637
TP D TP HDG TP R AW+P +P R+N D + SP Y
Sbjct: 830 SQTPNWDTDTRTPYGTMTPSHDGSMTP-RHGAWDPTANTTPARNNDFDYSLEEPSPSPGY 888
Query: 638 QPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST---YVNAPSP--YLPSTP 689
P +P + + TPG+ + S + + S Y+N PSP Y P+TP
Sbjct: 889 NPSTPGYQMTSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMNTPSPSTYSPNTP 948
Query: 690 GGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGEESV- 748
GG P +P Y P TPG LD+ + G W DI VR +
Sbjct: 949 GGIPQSP----YNPQTPGAS--------LDS--------SMGDWCTTDIEVRIHTHDDTD 988
Query: 749 ----VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATG 804
G+IR V +G C V L +++ + + V P D+ KI+ G R + G
Sbjct: 989 LVGQTGIIRTV-SNGVCSVFLRQEDR--SVSIVSEHLAPVLPSNGDEFKIIYGDDRESVG 1045
Query: 805 KLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+++ DG + +++ D+K+L + L K+
Sbjct: 1046 RVLSKDGDVFVCRINE--DIKLLPINFLCKM 1074
>gi|322793927|gb|EFZ17213.1| hypothetical protein SINV_14267 [Solenopsis invicta]
Length = 899
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 256/749 (34%), Positives = 380/749 (50%), Gaps = 68/749 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+SV+A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V +
Sbjct: 167 LQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKE 226
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V VD + +V +KL+PRID L E
Sbjct: 227 QTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSESEA 286
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+ +KK PP + + + R + V GD+ G + GFLYK + +I
Sbjct: 287 LKRKKKRRPPAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTTSAI 341
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-----FMKGDAVIVIKGDLK 238
A+ ++PT ELE+F E E D++ + K+ F GD V V +G+L
Sbjct: 342 IAEGVKPTLSELERFEEAPEGVEIDLSGTPGTGTSGKEDQNVTHSFSNGDNVEVCEGELI 401
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
NL+G + +D + + P+ + L + L + EL KYF G+HVKVV+G G TG++++
Sbjct: 402 NLQGKIVSIDGNMIMVMPKHEELKEALEFQASELRKYFTQGDHVKVVAGRYEGDTGLIVR 461
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
VEQ+ +++ SD + ++ V D+ S++ TG+ +G ++ DLV LD + GVI+R+E
Sbjct: 462 VEQNRVVLFSDLSMHELEVLPRDLQLCSDMATGVDSLGQFQWGDLVQLDAQTVGVIVRLE 521
Query: 359 SEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCK 414
E F VL K V RP+ L K RE + + D +NT+ KD+V++V+GP
Sbjct: 522 RENFHVLSMHGKVVEARPQ-GLTKRRE-----NRNAVALDSQQNTIQKKDIVKVVDGPHA 575
Query: 415 GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT 474
G+ G ++H+YR F+H R +++ G K+ + GG++ + + F S
Sbjct: 576 GRGGEIKHLYRSFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKTTSINSMSPVTGFMS--- 632
Query: 475 PPRI--PQSPGRYSRGGPPAGGRNRGGRGGHDA------LVGTTVKVRLGPYKGYRGRVV 526
PRI P P G GG GRGG L+GTT+K+ GPYKG G V
Sbjct: 633 -PRIASPMHPSGGGFGRGGGGGGRGRGRGGGGGARRDRELIGTTIKITGGPYKGNVGIVK 691
Query: 527 DVKGQSVRVELESQMKVVTVDRSMISDNVVVST------PYRDTPRYGMGSETPMHP--- 577
D + RVEL S + ++VDRS I+ NV V T Y TP YG G +TPM+
Sbjct: 692 DATETTARVELHSTCQTISVDRSHIA-NVGVPTKDGGFSSYNRTPAYGAGGQTPMYARDG 750
Query: 578 SRTPLHPYMTPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPRDN-WEDGNP 628
S+TP+H TPM + G+ TP HDG RTP + AW+P +P R N ++ +
Sbjct: 751 SKTPMHGSQTPMYENGSRTPHYGSMTPSHDGSRTPGQSGAWDPSVTNTPARTNDFDTYSM 810
Query: 629 GSWGTSPQYQPGSPPSRAYEAPTPGSGWAS-------TPGGNYSDAGTPRDSSSTYVNAP 681
G+ P + TPG+ + S P + + + T S + YV P
Sbjct: 811 EEGGSPGYGPGYPPTGGPFTPQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPTGYVATP 870
Query: 682 SPY---LPSTPGGQPMTPNSASYLPGTPG 707
SP ++P G TP+ Y P TPG
Sbjct: 871 SPSGTGYTTSPHGAFATPSPMGYSPMTPG 899
>gi|449674715|ref|XP_002160161.2| PREDICTED: transcription elongation factor SPT5-like [Hydra
magnipapillata]
Length = 1005
Score = 345 bits (885), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 273/868 (31%), Positives = 443/868 (51%), Gaps = 97/868 (11%)
Query: 14 RSVIALDHLKNYIYIEADKEAHVKEACKGLR-NIYSQKVMLVPIREMTDVLAVESKAIDL 72
++V AL ++ +I +++ + A E LR I+ Q+ +VPI EM DVL V + +
Sbjct: 181 QTVFAL--MRKFITLQSSETA--IEGFGALRLGIWKQQ--MVPINEMADVLKVVKDIVQI 234
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVP 132
+WVR++ G YK D+A+V V+ R +V++KLIPRID++ + + E R++ +K+ P
Sbjct: 235 KPKSWVRIRRGLYKDDIAQVDYVNTARNQVSLKLIPRIDMELVKEQSEERDLKRKRRPRP 294
Query: 133 PPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTF 192
P + + D + V D F ++ GFLYKT+++ ++ ++PT
Sbjct: 295 PQKMFDKDTLFKNGGLVTTDGD------FSIYKNNRYRGGFLYKTMAISALITDGVKPTL 348
Query: 193 DELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKGWVEKVDEEN 251
ELEKF ++ + ++ + A + H F GD + V +G+L +L G V VD
Sbjct: 349 SELEKFEESVDDADLELGNSK---AKEEIAHSFAPGDVIRVAEGELVHLTGKVLTVDGNT 405
Query: 252 VHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTT 311
+ I P+ + L + L + EL KYF+ G+HVKV+ G+ G TG++++VE +V I+ SD T
Sbjct: 406 ITIMPQHEDLKEPLEFPAHELEKYFKVGDHVKVLKGSFEGDTGIIVRVEDNVAILFSDLT 465
Query: 312 KEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDR 371
+++V +D+ S+++TG+ +G + +LV +D + GVI+R+E E+F VL
Sbjct: 466 FHELKVKPNDLQLCSDMSTGVDSLGQHSWGELVSIDRETVGVIVRLERESFSVLN---QH 522
Query: 372 PEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIH 431
+V +K + + K + S D +N + VKD+V+++EG +G QG ++H+YRG F+
Sbjct: 523 GKVVQLKPQAVTKKRDYNSVALDSEQNQIQVKDIVKVIEGKFEGLQGEIKHLYRGNAFVQ 582
Query: 432 DRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPP 491
+ LE+ G +S S V+ G +A + F + PRI SP R G
Sbjct: 583 SKMVLENGGIFVVRSKSLVLAGAGKAISSMLPGIGNGFVPMS--PRI-SSPARDGGRGGM 639
Query: 492 AGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSM 550
GG G G D +L+G TV++ GP+KGY G + D R+EL + K ++VDRS
Sbjct: 640 GGGGGGGRGRGRDNSLIGQTVRIVQGPFKGYIGIIKDATDSLARIELHTNCKTISVDRSR 699
Query: 551 IS-----DNVVVSTPYRDTPRYGM-------------------GSETPMHPSRTPLH-PY 585
++ + ST Y TP + + G+ TP + RTPLH P
Sbjct: 700 LTLISGKNRSGSSTSYGQTPLHWLNQTPIGSRTPGNSTPSIHDGNRTPNYGGRTPLHDPS 759
Query: 586 MTPMRDAGATPIHD-GMRTPMR---DRAWNPYTPMSP--PRDNWED------GNPGSWGT 633
TP D TP HD G RTP AW+P P +P P D +E+ +PG +G
Sbjct: 760 RTPSHDPSRTPSHDQGNRTPSHVGHGGAWDPTQPNTPARPSDEYENYFDVTASSPG-FGN 818
Query: 634 SPQYQPGSPPSRAYEAP-TPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQ 692
+P P +P AY AP TPG+ ++ GG DSS + ++ PSP + G
Sbjct: 819 TPS--PQTPSHSAYNAPYTPGTPMSNVFGG---------DSSYSPMHTPSPII-----GN 862
Query: 693 PMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGE------E 746
P+TP A +P +P P TP + D + DI+V+ + +
Sbjct: 863 PLTP-GAGLMPMSPAYTPNTPRSQFDDEH-------DHTENLATDIMVKVNDDYHDQRYA 914
Query: 747 SVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKL 806
+ IR + D +L + ++IT ++EIVPP D++K++ G + TG+L
Sbjct: 915 NKRAAIRAIDDDVLTLQMLDTK---ESITLNNTDVEIVPPVVKDQVKLLAGADKNYTGEL 971
Query: 807 IGVDGTDGIVKVD-VSLDVKILDMAILA 833
I +DG DGI+++D +KIL + LA
Sbjct: 972 INIDGPDGIIRMDKKDSTLKILQLPHLA 999
>gi|312372578|gb|EFR20509.1| hypothetical protein AND_19976 [Anopheles darlingi]
Length = 1089
Score = 345 bits (884), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 279/870 (32%), Positives = 426/870 (48%), Gaps = 116/870 (13%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRN----IYSQKVMLVPIREMTDVLAVE 66
LQI++V+A + +K YIYIEA K+AHVK A + N I+ Q+ +VPI+EMTD+L V
Sbjct: 248 LQIKAVVAPESVKGYIYIEAYKQAHVKAAINNVGNLRVGIWKQE--MVPIKEMTDILKVV 305
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL---EGRE 123
+ L WVR+K G YK D+A+V VD + +V +KL+PRID L L +
Sbjct: 306 KEQSGLKPKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRLRGALRTTQQES 365
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
K+K P + + + R + V GD+ G + GFLYK +M ++
Sbjct: 366 SDKRKKRRPAAKSFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKAFTMSAV 420
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGW 243
+ ++PT ELE+F E ++A +S+ F GD V V GDL NL+
Sbjct: 421 QVEGVKPTLAELERFEEQPEEINIELA-VSSKEDPVTAHSFSMGDNVEVCVGDLMNLQAK 479
Query: 244 VEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHV 303
+ +D + + P+ + L L + EL KYF+ G+HVKV++G G TG++++VE
Sbjct: 480 IIAIDGSLITVMPKHEELRDPLIFKAGELRKYFKTGDHVKVLAGRYEGETGLIVRVEPGR 539
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQ 363
++++SD T ++ V D+ +++ TG+ +G Y+ DLV LD + GVI+R+E E F
Sbjct: 540 VVLVSDLTMHELEVLPRDLQLCTDMATGVDSLGIYQWGDLVQLDAQTVGVIVRLERENFH 599
Query: 364 VL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
VL K + +P AL K RE + + D ++N + KD+V+++EGP G+ G
Sbjct: 600 VLGMHGKVIECKP-TALQKRRE-----NRNTIALDGDQNQIRRKDIVKVMEGPHTGRDGE 653
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIP 479
++H+YR + F+H R + E+ G K+ + GG++ N + S F PRI
Sbjct: 654 IKHLYRNLAFLHSRMYTENGGIFVVKTRHLQLAGGNK-NALPSNPMMSPFGGGIMSPRI- 711
Query: 480 QSPGRYSRGGPPAG------------------GRNRGGRGGHDALVGTTVKVRLGPYKGY 521
SP S G R+R ++G T+++ GPYKG
Sbjct: 712 HSPMHPSGGRGGGSSGGPTRGGRGGGRGGARISRDR-------EILGRTIRITGGPYKGA 764
Query: 522 RGRVVDVKGQSVRVELESQMKVVTVDRSMI------------SDNVVVSTPYRDTPRYGM 569
G V D + RVEL S + ++VDR+ I S + + TP R TP
Sbjct: 765 VGIVKDATETTARVELHSSCQTISVDRNHIAVVDGKAVVREGSMSSYMRTPSR-TPASSY 823
Query: 570 GSETPMHP-SRTPLHPYMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRD 621
G++TP++ S+TPLH TP D G+ TP HDG TP R AW+P +P R
Sbjct: 824 GAQTPVYSGSKTPLHGSQTPQYDPGSRTPYGSMTPSHDGSMTP-RHGAWDPSVSNTPARS 882
Query: 622 N----WEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTY 677
N E+ +P SP Y P +P Y+ TP + TPG ++ ++ S Y
Sbjct: 883 NDFDFMEEASP-----SPGYNPSTP---GYQINTPYA--PHTPGNMFNT-----ENYSPY 927
Query: 678 VNAPSPY-LPSTPGGQPMTPNSASYLPGTPGG-----QPMTPGTGGLDAMSPVIGADNEG 731
+P+P P GG TP+ ++Y P TPG P TPG G + P +G
Sbjct: 928 QASPNPSPSPYQVGGYIGTPSPSAYSPATPGAPASPYNPQTPGAG----LDPQLGD---- 979
Query: 732 PWFMPDI--LVRRSGEESV---VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPP 786
WF DI +R G+ + G+IR V +G C V L + T+ + ++ V P
Sbjct: 980 -WFTTDIEVTIRSHGDSDLSGQTGIIRSV-NNGDCVVFLPEEDHCVTVNI--SNLQPVLP 1035
Query: 787 RKTDKIKIMGGPHRGATGKLIGVDGTDGIV 816
+K KI+ G R G I + G++ V
Sbjct: 1036 EPGEKFKIIVGEDRETIGDFINISGSNEAV 1065
>gi|170033230|ref|XP_001844481.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167873888|gb|EDS37271.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1046
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 283/876 (32%), Positives = 421/876 (48%), Gaps = 96/876 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRN----IYSQKVMLVPIREMTDVLAVE 66
LQI+SV+A + +K Y+YIEA K+ HVK A + N I+ Q+ +VPI+EMTD+L V
Sbjct: 213 LQIKSVVAPEGVKGYVYIEAYKQTHVKAAITNVGNLRMGIWKQE--MVPIKEMTDILKVV 270
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAK 126
+ L WVR+K G YK D+A+V VD + +V +KL+PRID L L
Sbjct: 271 KEQTGLKPKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRLRGALRTTSSEN 330
Query: 127 KKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQ 186
+ R IR GD+ G + GFLYK +M +I A+
Sbjct: 331 DENKKKKKRRPAAKPFDPEAIRAIGGEVTSDGDFLIFEGNRYSRKGFLYKNFTMSAILAE 390
Query: 187 NIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEK 246
++PT ELE+F E ++A S N F GD V V GDL+NL+ +
Sbjct: 391 GVKPTLAELERFEEQPEEINIELAVSSKEDTNSTHT-FSMGDNVEVCVGDLENLQAKIIA 449
Query: 247 VDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLII 306
+D + + P+ + L L + EL KYF+ G+H KV++G G TG++++VE +++
Sbjct: 450 IDGALITVMPKHEDLKDPLIFKASELRKYFKTGDHAKVLAGRYEGETGLIVRVEPQRIVL 509
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVL- 365
+SD T ++ V D+ S++ TG+ +G Y+ DLV LD + GVI+R+E E F VL
Sbjct: 510 VSDLTMHELEVLPRDLQLCSDMATGVDSLGQYQWGDLVQLDAQTVGVIVRLERENFHVLG 569
Query: 366 ---KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEH 422
K + +P AL K RE + + D ++N + +D+V+++EGP G+ G ++H
Sbjct: 570 MHGKVMECKP-TALQKRRE-----NRNTIALDSDQNQIRRRDIVKVMEGPHAGRDGEIKH 623
Query: 423 IYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGD------RNGDAYSRFNSLRTPP 476
+YR + F+H R + E+ G K+ + GG++ G+ + G R +S P
Sbjct: 624 LYRNLAFLHSRMYTENGGIFVCKTRHLQLAGGNKTQGNALMPMGQFGFMSPRIHS----P 679
Query: 477 RIPQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRV 535
P +RGG GGR R D ++G ++K+ GPYKG G V D + RV
Sbjct: 680 MHPSGGRGGARGGGRGGGRGGANRVSRDKEILGKSIKITGGPYKGAVGIVKDATESTARV 739
Query: 536 ELESQMKVVTVDRSMI----------SDNVVVSTPYRDTPRYGMGSETPMHP-SRTPLHP 584
EL S + ++VDR+ I S + + TP R TP G++TP++ S+TPLH
Sbjct: 740 ELHSSCQTISVDRNHIAVVGSTPKEGSVSSYIRTPSR-TPSGSYGAQTPVYSGSKTPLHG 798
Query: 585 YMTPMRDAG-------ATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY 637
TP D G TP HDG TP R AW+P +P R N D N SP Y
Sbjct: 799 SQTPSYDVGNRTPYGSMTPSHDGSMTP-RHGAWDPAVTNTPARSNDFDFNMEEPSPSPGY 857
Query: 638 QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSS----------TYVNAPSP--YL 685
P +P Y+ TP + TPG ++ S Y+ PSP Y
Sbjct: 858 NPSTP---GYQINTPFA--PHTPGNMFNTENYSPYQPSPSPSPSPYQVNYMGTPSPSGYS 912
Query: 686 PSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVR-RSG 744
P+TPG P +P Y P TPG LD+ G W DI V R+
Sbjct: 913 PATPGA-PQSP----YNPQTPG--------ASLDSQF--------GEWCTTDIEVEIRNH 951
Query: 745 EES----VVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIE-IVPPRKTDKIKIMGGPH 799
++S G IR V G+C V L +T L N +E +VP D+ K++ G
Sbjct: 952 DDSDLAGQTGFIRTVT-SGACSVFLPEEDR--VVTVLSNNLEPVVPTVAGDRFKVIFGDE 1008
Query: 800 RGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
R G+ + + + V ++ K+L + L K+
Sbjct: 1009 RETLGEFLSLSSNKEAI-VSINGKKKLLPLNYLCKV 1043
>gi|125806983|ref|XP_001360216.1| GA20489 [Drosophila pseudoobscura pseudoobscura]
gi|195149331|ref|XP_002015611.1| GL10931 [Drosophila persimilis]
gi|54635387|gb|EAL24790.1| GA20489 [Drosophila pseudoobscura pseudoobscura]
gi|194109458|gb|EDW31501.1| GL10931 [Drosophila persimilis]
Length = 1080
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 281/882 (31%), Positives = 434/882 (49%), Gaps = 109/882 (12%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
+QI+S+IA + +K YIY+EA K+ HVK A + N+ K +VPI+EMTDVL V +
Sbjct: 247 IQIKSIIAPEGVKGYIYLEAYKQTHVKTAIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKE 306
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL--------E 120
+ L WVR+K G YK D+A+V VD + +V +KL+PRID + L +
Sbjct: 307 QVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGALRTTATETDD 366
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
G+ K++P P + + R + V GD+ G + GFLYK +M
Sbjct: 367 GKRKKKRRPVAKP---FDPEAVRAIGGEVHS-----DGDFLLFEGNRYSRKGFLYKNFTM 418
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKN 239
+I + ++PT ELE+F E E ++ L + + H F GD V V GDL+N
Sbjct: 419 SAILSDGVKPTLAELERFEESPE--EVNLELLGNVKDDPTSTHSFSMGDNVEVCVGDLEN 476
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
L+ + +D + + P+ + L L + EL KYF+ G+H +V++G G TG++++V
Sbjct: 477 LQAKIVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLIIRV 536
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
E ++++SD T ++ V D+ S+V TG+ +G ++ DLV LD+ + GVI+R+E
Sbjct: 537 EPLRVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDLVQLDSQNVGVIVRLER 596
Query: 360 EAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKG 415
E F VL K + +P AL K RE + + D ++N + +D+V+++EGP G
Sbjct: 597 ENFHVLGMNGKCIECKP-TALHKRRE-----NRNTVALDADQNQIRRRDIVKVMEGPHAG 650
Query: 416 KQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRAN----GDRNGDAYSRFNS 471
+ G ++H+YR + F+H R + E+ G K+ + GGS+ N G G +
Sbjct: 651 RSGEIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTNVNPAGSMGGLGF----- 705
Query: 472 LRTPPRIPQSPGRYSRGGPPAGGRNRGG----RGGHD-ALVGTTVKVRLGPYKGYRGRVV 526
PRI QSP S G A G RGG R D ++G T+K+ GPYKG G V
Sbjct: 706 --MSPRI-QSPMHPSGGRGGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVK 762
Query: 527 DVKGQSVRVELESQMKVVTVDRSMISDNVVVSTP--------YRDTPRY--GMGSETPMH 576
D + RVEL + + ++VDR+ I+ +V P Y TP G G++TP +
Sbjct: 763 DATEATARVELHTSCQTISVDRNHIA---IVGVPGKEGSVSTYGRTPARTPGYGAQTPSY 819
Query: 577 P---SRTPLHPYMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDG 626
S+TPL TP D TP HDG TP R AW+P +P R+N D
Sbjct: 820 TAAGSKTPLVGSQTPNWDTDTRTPYGTMTPSHDGSMTP-RHGAWDPTANTTPARNNDFDY 878
Query: 627 NPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST---YVNA 680
+ SP Y P +P + + TPG+ + S + + S Y+N
Sbjct: 879 SLEEPSPSPGYNPSTPGYQMTSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYLNT 938
Query: 681 PSP--YLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDI 738
PSP Y P+TPGG P +P Y P TPG LD+ + G W DI
Sbjct: 939 PSPSTYSPNTPGGIPQSP----YNPQTPGAS--------LDS--------SMGDWCTTDI 978
Query: 739 LVRRSGEESV-----VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIK 793
VR + G+IR V +G C V L +++ + + VPP D+ K
Sbjct: 979 EVRIHTHDDTDLVGQTGIIRTV-SNGVCSVFLRQEDR--SVSIVSEHLAPVPPNSGDEFK 1035
Query: 794 IMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
++ G R + G+++ D +V ++ +VK++ + L K+
Sbjct: 1036 VIYGEERESVGRVLSKQEGDVLV-CKINDEVKMIPVNHLCKM 1076
>gi|21358129|ref|NP_652610.1| Spt5 [Drosophila melanogaster]
gi|75026270|sp|Q9V460.1|SPT5H_DROME RecName: Full=Transcription elongation factor SPT5; AltName: Full=DRB
sensitivity-inducing factor large subunit; Short=DSIF
large subunit; AltName: Full=dSpt5
gi|6980000|gb|AAF34689.1|AF222864_1 Dspt5 [Drosophila melanogaster]
gi|7302477|gb|AAF57561.1| Spt5 [Drosophila melanogaster]
gi|73853381|gb|AAZ86761.1| LD10265p [Drosophila melanogaster]
gi|220950398|gb|ACL87742.1| Spt5-PA [synthetic construct]
Length = 1078
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 276/871 (31%), Positives = 427/871 (49%), Gaps = 89/871 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
LQI+S+IA + +K YIY+EA K+ HVK + N+ K +VPI+EMTDVL V +
Sbjct: 247 LQIKSIIAPEGVKGYIYLEAYKQTHVKTCIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKE 306
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
+ L WVR+K G YK D+A+V VD + +V +KL+PRID + L E +
Sbjct: 307 QVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGALRTTATESDD 366
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK P + + + R + V GD+ G + GFLYK +M +I
Sbjct: 367 SKRKKKRRPAAKPFDPEAVRAIGGEVHS-----DGDFLLFEGNRYSRKGFLYKNFTMSAI 421
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
+ ++PT ELE+F E E ++ + T+ + H F GD V V GDL+NL+
Sbjct: 422 LSDGVKPTLAELERFEESPE--EVNLEIMGTVKDDPTMAHSFSMGDNVEVCVGDLENLQA 479
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + + P+ + L L + EL KYF+ G+H +V++G G TG++++VE
Sbjct: 480 KIVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLIIRVEPT 539
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++SD T ++ V D+ S+V TG+ +G ++ D+V LD+ + GVI+R+E E F
Sbjct: 540 RVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDMVQLDSQNVGVIVRLERENF 599
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
VL K + +P AL K +E + + D ++N + +DVV+++EGP G+ G
Sbjct: 600 HVLGMNGKCIECKP-TALHKRKE-----NRHTVALDADQNQIRRRDVVKVMEGPHAGRSG 653
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR-FNSLRTPPR 477
++H+YR + F+H R + E+ G K+ + GGS+ G F S PR
Sbjct: 654 EIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTTVSNAGIVGGLGFMS----PR 709
Query: 478 I--PQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
I P P A G G R D ++G T+K+ GPYKG G V D + R
Sbjct: 710 IQSPMHPSGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDATESTAR 769
Query: 535 VELESQMKVVTVDRSMISDNVV------VSTPYRDTPRY-GMGSETPMHP---SRTPLHP 584
VEL + + ++VDR+ I+ V VST R R G G++TP + S+TPL
Sbjct: 770 VELHTSCQTISVDRNHIAIVGVTGKEGSVSTYGRTPARTPGYGAQTPSYTAAGSKTPLVG 829
Query: 585 YMTPMRDAGA-------TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY 637
TP D TP HDG TP R AW+P +P R+N D + SP Y
Sbjct: 830 SQTPNWDTDTRTPYGTMTPSHDGSMTP-RHGAWDPTANTTPARNNDFDYSLEEPSPSPGY 888
Query: 638 QPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST---YVNAPSP--YLPSTP 689
P +P + + TPG+ + S + + S Y+N PSP Y P+TP
Sbjct: 889 NPSTPGYQMTSQFAPQTPGTLYGSDRSYSPFNPSPSPAPSPYPVGYMNTPSPSTYSPNTP 948
Query: 690 GGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGEESV- 748
GG P +P Y P TPG LD+ + G W DI VR +
Sbjct: 949 GGIPQSP----YNPQTPGAS--------LDS--------SMGDWCTTDIEVRIHTHDDTD 988
Query: 749 ----VGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATG 804
G+IR V +G C V L +++ + + V P D+ KI+ G R + G
Sbjct: 989 LVGQTGIIRTV-SNGVCSVFLRQEDR--SVSIVSEHLAPVLPCNGDEFKIIYGDDRESVG 1045
Query: 805 KLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+++ DG + +++ ++K+L + L K+
Sbjct: 1046 RVLSKDGDVFVCRINE--EIKLLPINFLCKM 1074
>gi|91084937|ref|XP_971098.1| PREDICTED: similar to Spt5 CG7626-PA [Tribolium castaneum]
Length = 1050
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 282/870 (32%), Positives = 426/870 (48%), Gaps = 111/870 (12%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+SV+A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V +
Sbjct: 243 LQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKE 302
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V D + +V +KL+PRID L L E
Sbjct: 303 QTGLKSKQWVRLKRGLYKDDIAQVDYFDMAQNQVHLKLLPRIDYTRLRGALRTTQSESEA 362
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK PP + + + R + V GD+ G + GFLYK ++ ++
Sbjct: 363 EKRKKKRRPPSKPFDPEAIRSIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTLSAV 417
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
++PT ELE+F E E L T ++ H F GD V V +G+L NL+G
Sbjct: 418 IIDGVKPTLAELERFE---EQPEGIDLELPTEKEDKAVTHSFSAGDNVEVCEGELINLQG 474
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + I P+ + L + L ++ EL KYF+ G+HVKV++G G TG+V++VE +
Sbjct: 475 KIISIDGTMITIMPKHEDLKEPLFFHASELKKYFKMGDHVKVLAGRYEGDTGLVVRVENN 534
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++SD T ++ + D+ +++ +G+ +G +E DLV LD + GVI+R+E E F
Sbjct: 535 RVVLISDLTMHEMEILPKDLQLCTDMASGVDSLGKFEWGDLVNLDAETVGVIVRLERENF 594
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
VL K V RP +L K R L + + D +N + KD+V++++GP G G
Sbjct: 595 HVLNMHGKVVECRPG-SLQKRR-----LNRFTAALDSYRNNLHRKDMVKVIDGPHSGFSG 648
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNS-LRTPPR 477
++H+YR F+H L++ G K+ + GG+++ + + S R+ P
Sbjct: 649 EIKHLYRNFAFLHSVEFLQNGGIFVCKTKHLQLAGGNKSVPSADISTGMEYMSPRRSSPM 708
Query: 478 IPQSPGRYSRGGPPAG---GRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
P S G GG R+R ++GTT+K+ GPYKG G V D + R
Sbjct: 709 HPSSGGGGMGGGGGGRGRVSRDRD-------IIGTTIKITKGPYKGNIGIVKDATQSTAR 761
Query: 535 VELESQMKVVTVDRSMISDNVVVSTPYRD--------TPRYGMGSETPMHP--------- 577
+EL + + ++VDRS I+D V TP RD TP Y G++TP++
Sbjct: 762 IELHTSCQTISVDRSHIAD---VGTPSRDGSISSYGRTPAY-TGNQTPLYRDTGNKTPMC 817
Query: 578 ---SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTS 634
SRTPLH Y M TPIHDG RTP W+P + P S
Sbjct: 818 DSGSRTPLH-YGGSM-----TPIHDGSRTPNASSEWDPTVSNTYP--------------S 857
Query: 635 PQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP---YLPSTPGG 691
P Y PG+P + TP TPG Y +P +S+ ++ PSP Y S
Sbjct: 858 PGYNPGTPGYQMNGPFTP-----QTPGTIYDSTYSPYQASA--ISTPSPATGYGQSPASN 910
Query: 692 QPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVR------RSGE 745
P S+ Y P P P TPG GLD + P+ W DI VR G
Sbjct: 911 NPYNTPSSGYSPNMPY-NPQTPG-AGLDVL-PMTD------WHTIDIEVRIRDSHDDPGL 961
Query: 746 ESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGK 805
G+IR + C + L + + + +E V P++ D K++ G R ATG+
Sbjct: 962 VGQTGIIRSI-SGAMCSIFLPEEDR--VVNIISDHLEPVRPQRGDAFKVIIGEEREATGE 1018
Query: 806 LIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
L+ +D +G+VK + D+K+L + L K+
Sbjct: 1019 LLSIDLHEGVVK--MKNDIKMLPLQNLCKM 1046
>gi|303285722|ref|XP_003062151.1| transcription elongation-nucleosome displacement protein Spt5
[Micromonas pusilla CCMP1545]
gi|226456562|gb|EEH53863.1| transcription elongation-nucleosome displacement protein Spt5
[Micromonas pusilla CCMP1545]
Length = 1290
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 247/733 (33%), Positives = 365/733 (49%), Gaps = 96/733 (13%)
Query: 1 MQKCID-----KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK-VMLV 54
MQK I+ KG+ + I+S + DHLK+Y+Y+EA++E HVK+A GLR++Y K + LV
Sbjct: 299 MQKAINLHRSGKGA-MAIKSAVVQDHLKSYVYVEAEREDHVKKALAGLRHVYHSKPIKLV 357
Query: 55 PIREMTDVLAVESKAI-DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
PI EM + + V K + ++ +WVRM+ G YKGDLAK+VDV+ + TVKL+PR D
Sbjct: 358 PIAEMVESVTVTKKKVSNIKMGSWVRMRGGAYKGDLAKIVDVNFADNQCTVKLVPRFDYA 417
Query: 114 ALANKLEGREVAKKKPFV-PPPRFMNVDEARELHIRVERRRDP--MTGDYFENIGGMLFK 170
L K EG +KK + PP R + + ++ +ER R M + G
Sbjct: 418 HLQAKEEGTHQGRKKANLRPPARLFTEAMSAKYNLPLERSRHDRRMRANVDVLCGQHKLM 477
Query: 171 DGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIA-------------SLSTLF- 216
DG+ KT+S+ S + P DEL++F T E E+ + S+L
Sbjct: 478 DGYYVKTISLASCKLAD-APALDELQRFSTGEEATEAKTSDGGRANAAANLEALASSLEG 536
Query: 217 ANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEE-NVHIRPEMKGLPKTLAVNSKELCKY 275
A +++ +F+ GD VI + GDL NL G V + + +V I P + + + V+ + L KY
Sbjct: 537 AAKREQNFLPGDHVICVDGDLVNLTGVVVHDNADGSVKITPTHDDIHEDIDVDKQTLRKY 596
Query: 276 FEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKI 335
F+ G+HV+ V G G +G+V+KVE V + SD +E+ VF+ D+ +S EVT + I
Sbjct: 597 FKVGSHVRCVHGVHDGESGLVVKVEGQVTTVFSDVKQEEFLVFSQDLADSKEVTRRVESI 656
Query: 336 GDYELRDLVLLDNNSFGVIIRVESEAFQVL--KGVPDRPEVALVKLREIKCKL-EKKSNV 392
G + + DLV L++++ G+I+RVE +A V+ DRP+V VKL +++ KL +++
Sbjct: 657 GVFTIHDLVQLESSAVGMIVRVEKDAAMVMMASSTADRPDVRPVKLHDMRRKLMDRRVTA 716
Query: 393 QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHL-EHAGFICAKSSSCVV 451
D T+ +VRIV+GP KG + V+HI RG L+ R + + G + K+ SC V
Sbjct: 717 SDAGMETIENGSMVRIVDGPGKGMRLTVKHINRGTLWGKVRGDVADFGGIVAVKARSCRV 776
Query: 452 VGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGP------------PAGGRNRGG 499
G +G + + F + PQSPG P P GR GG
Sbjct: 777 DGSKSKDGGNDANRAGGFAA------APQSPGAALLRSPAARQQPMQMQDAPRAGRFGGG 830
Query: 500 RGGH--DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI------ 551
G ++LVGTT+KV G YKGY+G+VVD +VRVEL++Q + VTV R+ I
Sbjct: 831 PVGRRDNSLVGTTIKVSAGVYKGYKGKVVDATETTVRVELQAQARTVTVQRNQIVMPSAA 890
Query: 552 ----------------------SDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPM 589
+ Y TP YG G + +TP+
Sbjct: 891 PPWGGAAAAPAAYQPAAPATAPTPARTPMREYARTPAYGDGIGS------------VTPL 938
Query: 590 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEA 649
RD GA G RTP+RD AWNP TP + + T+ P S P Y
Sbjct: 939 RDDGA-----GGRTPLRDSAWNPATPHHDGGVGGGGWDDDAPSTASAPAPSSDPDAGYAG 993
Query: 650 PTPGSGWASTPGG 662
S P G
Sbjct: 994 VFVTKAVVSLPDG 1006
>gi|270008998|gb|EFA05446.1| hypothetical protein TcasGA2_TC015626 [Tribolium castaneum]
Length = 1061
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 286/879 (32%), Positives = 430/879 (48%), Gaps = 111/879 (12%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+SV+A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V +
Sbjct: 236 LQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKE 295
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V D + +V +KL+PRID L L E
Sbjct: 296 QTGLKSKQWVRLKRGLYKDDIAQVDYFDMAQNQVHLKLLPRIDYTRLRGALRTTQSESEA 355
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK PP + + + R + V GD+ G + GFLYK ++ ++
Sbjct: 356 EKRKKKRRPPSKPFDPEAIRSIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTLSAV 410
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
++PT ELE+F E E L T ++ H F GD V V +G+L NL+G
Sbjct: 411 IIDGVKPTLAELERFE---EQPEGIDLELPTEKEDKAVTHSFSAGDNVEVCEGELINLQG 467
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
+ +D + I P+ + L + L ++ EL KYF+ G+HVKV++G G TG+V++VE +
Sbjct: 468 KIISIDGTMITIMPKHEDLKEPLFFHASELKKYFKMGDHVKVLAGRYEGDTGLVVRVENN 527
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
++++SD T ++ + D+ +++ +G+ +G +E DLV LD + GVI+R+E E F
Sbjct: 528 RVVLISDLTMHEMEILPKDLQLCTDMASGVDSLGKFEWGDLVNLDAETVGVIVRLERENF 587
Query: 363 QVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
VL K V RP +L K R L + + D +N + KD+V++++GP G G
Sbjct: 588 HVLNMHGKVVECRPG-SLQKRR-----LNRFTAALDSYRNNLHRKDMVKVIDGPHSGFSG 641
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNS-LRTPPR 477
++H+YR F+H L++ G K+ + GG+++ + + S R+ P
Sbjct: 642 EIKHLYRNFAFLHSVEFLQNGGIFVCKTKHLQLAGGNKSVPSADISTGMEYMSPRRSSPM 701
Query: 478 IPQS----PGRYSRGGPPAGGRNRGGRGGHDA-----LVGTTVKVRLGPYKGYRGRVVDV 528
P S G ++ P GG GG G ++GTT+K+ GPYKG G V D
Sbjct: 702 HPSSGGGGMGGFASPRPGGGGGGGGGGGRGRVSRDRDIIGTTIKITKGPYKGNIGIVKDA 761
Query: 529 KGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRD--------TPRYGMGSETPMHP--- 577
+ R+EL + + ++VDRS I+D V TP RD TP Y G++TP++
Sbjct: 762 TQSTARIELHTSCQTISVDRSHIAD---VGTPSRDGSISSYGRTPAY-TGNQTPLYRDTG 817
Query: 578 ---------SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNP 628
SRTPLH Y M TPIHDG RTP W+P + P
Sbjct: 818 NKTPMCDSGSRTPLH-YGGSM-----TPIHDGSRTPNASSEWDPTVSNTYP--------- 862
Query: 629 GSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPST 688
SP Y PG+P + TP TPG Y +P +S Y +A S P+T
Sbjct: 863 -----SPGYNPGTPGYQMNGPFTP-----QTPGTIYDSTYSPYQASPGYQSAISTPSPAT 912
Query: 689 PGGQ------PMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVR- 741
GQ P S+ Y P P P TPG GLD + P+ W DI VR
Sbjct: 913 GYGQSPASNNPYNTPSSGYSPNMP-YNPQTPG-AGLDVL-PMTD------WHTIDIEVRI 963
Query: 742 -----RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMG 796
G G+IR + C + L + + + +E V P++ D K++
Sbjct: 964 RDSHDDPGLVGQTGIIRSI-SGAMCSIFLPEEDR--VVNIISDHLEPVRPQRGDAFKVII 1020
Query: 797 GPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
G R ATG+L+ +D +G+VK + D+K+L + L K+
Sbjct: 1021 GEEREATGELLSIDLHEGVVK--MKNDIKMLPLQNLCKM 1057
>gi|330798439|ref|XP_003287260.1| hypothetical protein DICPUDRAFT_47274 [Dictyostelium purpureum]
gi|325082720|gb|EGC36193.1| hypothetical protein DICPUDRAFT_47274 [Dictyostelium purpureum]
Length = 991
Score = 335 bits (859), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 276/899 (30%), Positives = 431/899 (47%), Gaps = 126/899 (14%)
Query: 1 MQKCIDK-----GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVP 55
MQK ++ + ++S++A HL ++Y+EA++E HV+ A KG+ ++ S +L P
Sbjct: 153 MQKMLNNQRGPPADRILVKSMMAPQHLPGHVYVEAEREVHVRNAIKGVTSLVSFTPILTP 212
Query: 56 IREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL 115
++++ ++L+ K +DL + +WVR+K+G YK D+ ++V D+ R R+TVKLIPR+DL A+
Sbjct: 213 LKDIIEILSANKKNVDLQKGSWVRIKLGKYKADIGQIVSSDSSRSRITVKLIPRLDLPAI 272
Query: 116 ANKLEGRE----------VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIG 165
A ++ +E K+K P RF N DE +L I + R+ G F +
Sbjct: 273 AQSIKDKEDKDSQGDKNKSGKRKRTRPQARFFNPDEVEKLKIPLTRQTTASHGVLFV-MN 331
Query: 166 GMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGE-------NGESDI-ASLSTL-F 216
+KDGFLYK +S+ + P+ +EL+KF+ E N D+ A LS+
Sbjct: 332 NEKYKDGFLYKIFRTQSVIVDGVVPSLEELQKFQDREEKQLDEDGNPMLDVPAELSSAPI 391
Query: 217 ANR---KKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELC 273
R K HF KGD V V +GDLKNL VE V+++ V I P + + T A EL
Sbjct: 392 LPRILPKANHFSKGDTVRVAQGDLKNLMAIVESVEDDKVLIVPLDQNIKDTFAFKPYELQ 451
Query: 274 KYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT 333
KYF+ G+HVK + G G TGMVL+V++ +++LSD T +I+V D+ E +EV TG
Sbjct: 452 KYFKVGDHVKAIGGRYEGETGMVLRVDELQVVLLSDLTMTEIKVKPQDLQECTEVATGRL 511
Query: 334 KIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKS-NV 392
++G+YEL DLV + + GVI +VE ++F++L + V+ VKL+E+ K KS
Sbjct: 512 ELGNYELHDLVQIGPHKVGVITKVERDSFKILD---EGGNVSTVKLQEVGSKRRNKSFTT 568
Query: 393 QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVV 452
D + NT+ D++ +V+G KGKQG + HI R LFI + E+ G ++ C ++
Sbjct: 569 LDTHHNTIQSGDLIEVVDGSYKGKQGTILHISRNFLFIKSKDVFENGGVFVVRTQYCSLL 628
Query: 453 GGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVK 512
GG++ + + S Q G G GG G D+ + V
Sbjct: 629 GGNKNKQNNIQQQQQQNQS--------QRGGFGGGRGGGRGGHGGGRGRREDSPLHKVVT 680
Query: 513 VRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSE 572
++ GP+KGY G V + V+VEL++ K + V R+ N+++ P S+
Sbjct: 681 IKSGPWKGYVGIVKECTETMVQVELQTNSKRINVMRA----NILLPHERAQQP-ISNNSD 735
Query: 573 TPMHPSRTPLH--PYMTPMRDAGATPIHDGMRTP--MRDRA------------------- 609
+ RTP+ P TPMR TP P MR+ +
Sbjct: 736 WEFNVGRTPMREDPSQTPMR--MNTPARSNNHDPWAMRESSDYYSSSSSSNNSMNNNDDT 793
Query: 610 --------WNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPP---SRAYEAPTPGSGWAS 658
++PYTP +P DGN T Y +P S Y+ PTP
Sbjct: 794 TPGTNYSLYSPYTPTTPL-----DGNRHGESTYTPYDRSTPMGSYSHNYDNPTPSY---- 844
Query: 659 TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGL 718
NYSD TP + S SPY P P TPNS QP GT
Sbjct: 845 --LSNYSDH-TPHEIPS------SPYTPHNIPQTPATPNSGED-HDEEVEQPFWSGTN-- 892
Query: 719 DAMSPVIGADNEGPWFMPDILVRRSGEESVVGVIREVLPDGSCRV-VLGSSGNGDTITAL 777
+++ + +G+ +VV + +C++ +L + D +
Sbjct: 893 -----------------IEVIYKDNGKHAVVLA---NTTESTCKIEILDTKEVFDNVHQ- 931
Query: 778 PNEIEIVPPRKTDKIKIMGGPHRGATGKL-IGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+++ +V P K D + I+ G G TG L I + GI+K+D + D K+ M+ KL
Sbjct: 932 -SQLTLVSPLKKDHVVIIKGKLTGYTGTLFILTEENTGIIKMDSNYDFKVFKMSYFGKL 989
>gi|196015634|ref|XP_002117673.1| hypothetical protein TRIADDRAFT_32870 [Trichoplax adhaerens]
gi|190579713|gb|EDV19803.1| hypothetical protein TRIADDRAFT_32870 [Trichoplax adhaerens]
Length = 678
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 236/667 (35%), Positives = 363/667 (54%), Gaps = 59/667 (8%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKG---LRNIYSQKVMLVPIREMTDVL 63
KG+ LQI+SV+A++ LK YIY+EA K+ HVK+A +G LR Y ++ M VPI+EMTDVL
Sbjct: 33 KGTPLQIKSVVAVEGLKGYIYVEAFKQNHVKQAIEGIGYLRLGYYKQQM-VPIKEMTDVL 91
Query: 64 AVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE 123
V DL D WVR+K G YK D+AKV+ VDN R +VT+K+IPRIDL + + +
Sbjct: 92 RVVKSIPDLQADGWVRLKRGVYKDDIAKVIKVDNNRNQVTLKMIPRIDLTRKRGEKQSHD 151
Query: 124 VAK-KKPFVPPPRFMNVDEARELHIRVERRRDPMTGDY--FENIGGMLFKDGFLYKTVSM 180
K K+ P + ++D R ++ V G Y FE G F++GF+YKT++M
Sbjct: 152 GEKRKRKGRPKAKLFDMDLIRSINGEVTSE-----GGYLVFE---GNRFREGFMYKTMAM 203
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLS---TLFANRKKGHFMKGDAVIVIKGDL 237
+I+A+ + P+ ELE F + D ++S T ++ F+ GD + V GDL
Sbjct: 204 SAINAEGVIPSLTELENFEL-----DPDTVAVSKDLTSILDKDSPVFVAGDVIKVQNGDL 258
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVL 297
K L G V ++ + V + P+ + L + L ++ K F+ G HVKVV G G TG+V+
Sbjct: 259 KGLLGEVIAINVDIVTVMPKHEDLKEPLEFRLDQVSKTFKIGEHVKVVRGKFEGDTGLVV 318
Query: 298 KV--EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
+V E L++ +D T +++V DV +E+++GI G ++L DLV +D+ + G ++
Sbjct: 319 RVNEEDDGLVLFTDLTMHEVKVLTRDVQLCTEISSGIDSSGHFQLGDLVQIDSQTVGCVV 378
Query: 356 RVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCK 414
RV E VL +V VK + I K + ++ V D + N + +KD+V++++GP
Sbjct: 379 RVLREEMAVLNM---HGKVVKVKPQSISKKRDSRNAVALDGDGNALHIKDIVKVIDGPHN 435
Query: 415 GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT 474
G+Q V+H++R +F++ + ++ G +S ++ G ++ NGD+ + F +
Sbjct: 436 GQQAEVKHLFRSFVFLYSKMFPDNGGIFVCRSRHLILAGSAKRQD--NGDSRTPF--VPQ 491
Query: 475 PPRI--PQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQS 532
PRI P P R GP A G+ G D ++G ++++ GP+K Y G D +
Sbjct: 492 SPRITSPAHPQVQVRHGPGA--GRGRGKKGRDPIIGQSIRIFQGPFKNYIGIAKDATDTT 549
Query: 533 VRVELESQMKVVTVDRSMISDNVVVSTPYRD--------TPRYGMGSETPMHPSRTPLHP 584
VRVEL S K +TVDRS + VVV + TP Y GS+TPM+ SRTP++
Sbjct: 550 VRVELHSTCKTITVDRSRV---VVVKDGKEESAGGVTGITPSY--GSQTPMYGSRTPMYG 604
Query: 585 YMTPMRD-------AGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDG--NPGSWGTSP 635
TP+ D TP+HDG RTP AW+P P +P +D N S SP
Sbjct: 605 AQTPLYDGNRTPRYGSQTPMHDGSRTPSYSSAWDPKVPNTPSSRTEDDFDYNTDSVNPSP 664
Query: 636 QYQPGSP 642
Q +P
Sbjct: 665 QGYHSNP 671
>gi|339237199|ref|XP_003380154.1| transcription elongation factor SPT5 [Trichinella spiralis]
gi|316977067|gb|EFV60230.1| transcription elongation factor SPT5 [Trichinella spiralis]
Length = 915
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 275/904 (30%), Positives = 429/904 (47%), Gaps = 146/904 (16%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L I+S+I + LK IYIEA K HV A +G+ +Y V +VPI+E DV V
Sbjct: 77 LLIKSIIVKEGLKGMIYIEAYKMPHVMRAIEGVSTLYKNNVRMVPIKETPDVFKVIKDTS 136
Query: 71 DLSRDTWVRMKIGNYKGDLAKV--------------------VD-VDNVRQRVTVKLIPR 109
L +VR+K YK D+A++ VD VD ++ + +KLIPR
Sbjct: 137 ALKPGVFVRVKRSVYKDDIAQIFTSAIAIAERCCDKLDKKVLVDWVDLSQKSIHLKLIPR 196
Query: 110 IDLQALANKLEG---REVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGG 166
ID + + + KK+ PP + ++D R + V + G+++ G
Sbjct: 197 IDYTRMRGAMRSAGETDAPKKRKARPPAKLFDLDAVRAIGGEVGK-----DGEFYVFEGN 251
Query: 167 MLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMK 226
+ GFLYK++++ ++ A N++P ++ + G F+
Sbjct: 252 RYSRQGFLYKSMAISAVEANNVKP---------------------IANTLVREQHGQFVT 290
Query: 227 GDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVK 283
GD V V++G+L NL+G V VD + +H++ PE+KG TL N+ EL K+F G+HVK
Sbjct: 291 GDVVEVVEGELSNLRGKVTSVDGDTIHVQTAIPELKG---TLKFNAHELRKHFVVGDHVK 347
Query: 284 VVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDL 343
V+SG G TG+++ V + +I+++D + +I+V DV +V+TG+ G ++ DL
Sbjct: 348 VISGRYEGDTGLIVSVNSNYVILMTDLSMSEIQVLPKDVQLCRDVSTGVHSSGTFQYHDL 407
Query: 344 VLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAV 402
V++D + GVI+++E E VL +V +K + + K K V D N + V
Sbjct: 408 VMIDAETVGVIVQMEREYLHVLN---QNGKVVRMKHQSLYGKKSSKYAVALDCEGNNIGV 464
Query: 403 KDVVRIVEGPCKGKQGPVEHIYRGILFIHD-RHHLEHAGFICAKSSSCVVVGGSRANGDR 461
DV+++++GP KG QG V+H+YR LF++ HH + F+C + R
Sbjct: 465 GDVLKVIDGPNKGLQGEVKHLYRSYLFMYSTTHHKDGGMFVCRARHVLTLASSPRG---- 520
Query: 462 NGDAYSRFNSLRTPPRIPQSPGRYSRG---GPPAGGRNRGGRGGHDALVGTTVKVRLGPY 518
LR+P P G +RG P GR R R +G +V++ GP
Sbjct: 521 ---------VLRSPMH-PSGGGAAARGQMSTPYYIGRGRVCR--DYGAIGKSVRIIKGPM 568
Query: 519 KGYRGRVVDVKGQSVRVELESQMKVVTVDRS---MISDNVVVS----------------T 559
KGY G V D + +VEL + K ++V+RS ++S N S T
Sbjct: 569 KGYHGMVKDATESTAQVELHATCKTISVERSHLEVLSGNGEPSQAFQPYKSMRPPDGSQT 628
Query: 560 PYRD---TPRYGMGSETPMHPSRTPLH-----PYMTPMRDAGATPIHDGMRTPMRDRAWN 611
PY D TPRY G TPM+ S+TP+H PY TP+HDG RTP AW+
Sbjct: 629 PYADMGKTPRY--GPHTPMYGSQTPMHEGGRTPYY-----GSQTPMHDGSRTPSHANAWD 681
Query: 612 PYTPMSPPRDNWEDGNPGSWGTSPQYQPG-----SPPSRAYEAPTPGSGWASTPGGNYSD 666
P P +P R D + + SP + G SP + Y TP G TPG +S+
Sbjct: 682 PTVPNTPARRGIPDDD-FEYEASPVTKYGGPASVSPATPGYSVDTP-LGVPYTPGDLFSE 739
Query: 667 AGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG--------TGGL 718
+P S A SP L S G S S P T G + G + +
Sbjct: 740 NSSPFLMQS----ANSPLLGSYAGSS--VGESPSLQPSTSGLSLFSTGSRTSLSTPSSSI 793
Query: 719 DAMSPVIGAD-NEGPWFMP--DILVRRSGEESV----VGVIREVLPDGSCRVVLGSSGNG 771
+ SP + D N G W P ++++R + + VGV++ V D SC + + S
Sbjct: 794 TSDSPKLSFDGNLGEWVEPNMEVVIRDYPVDRMLNGRVGVVQAVTGD-SCTIFIPSLEKA 852
Query: 772 DTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAI 831
++ +E P + DK+KI+ G +TG +I +DG +G+VK D S ++++++MA
Sbjct: 853 --VSVYVEHLEPSKPLQGDKVKIIRGEDVDSTGLVISIDGVEGVVKTD-SDEIRLVNMAF 909
Query: 832 LAKL 835
L K+
Sbjct: 910 LCKM 913
>gi|307102429|gb|EFN50704.1| hypothetical protein CHLNCDRAFT_142577 [Chlorella variabilis]
Length = 1045
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 293/862 (33%), Positives = 412/862 (47%), Gaps = 133/862 (15%)
Query: 72 LSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL--EGREVAKKKP 129
L +WVR+K G YKGDLAKVVD D QR T+K++PR+DL ALA++ + + K+P
Sbjct: 204 LKAGSWVRIKNGLYKGDLAKVVDTDPGTQRGTIKVVPRLDLAALASRKPEDAKANFGKQP 263
Query: 130 FV-PPPRFMNVDEARELHIRVERRRDPMTGD-YFENIGGMLFKDGFLYKTVSMKSISAQN 187
V PP + N DEAR + V + RD TGD Y G F +G+L KTV++KS+ Q
Sbjct: 264 KVKPPAKPFNPDEARSHRLDVVQHRDRTTGDVYLILNGNNRFLEGYLIKTVALKSLELQE 323
Query: 188 IQPTFDELEKFRTPG---ENGESDIASLSTLFANRKKG---------HFMKGDAVIVIKG 235
P DEL+KF E G +D+ASL F KGD V+V++G
Sbjct: 324 ALPPLDELQKFNAAAQSDEGGGTDLASLVQTLQAEGGEGGGAASVAPKFEKGDRVLVVEG 383
Query: 236 DLKNLKGWVEKVDEEN-VHIRPEMKGLPK---TLAVNSKELCKYFEPGNHVKVVSGTQAG 291
DLKN++G V+ V E+ V + PE LP + +E+ KYFE G HVKV+ G G
Sbjct: 384 DLKNIQGRVQLVTEDGGVMVTPEDAALPDFRDAIRFEPREVTKYFESGEHVKVIHGQLKG 443
Query: 292 ATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSF 351
TGMV VE I +D T++++RVF D+ + ++ + +G YE+ DLV+LDN +
Sbjct: 444 ETGMVWGVEGPFCYIFTDATQQELRVFTRDLTLAVATSSSLDSLGGYEMHDLVVLDNTTV 503
Query: 352 GVIIRVESEAFQVLKGVPDRPEVALVKLREIKCK-LEKKSNVQDRNKNTVAVKDVVRIVE 410
GVI+ VE +A L+G PD+P++ + +L +IK K + K+++V+D N V V D+V +V+
Sbjct: 504 GVIVNVEQDA---LRGRPDKPDIRVCRLPDIKRKMMNKRASVKDGAGNDVGVGDMVDVVD 560
Query: 411 GPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR-------NG 463
GP KG+ G V +I RG +F+ R EHAGFIC ++ V GG
Sbjct: 561 GPLKGRGGTVRYIMRGFVFVQTREVSEHAGFICLQARHTKVRGGKGRPMGGGVGMTPGRS 620
Query: 464 DAYSRFNSLRTPPR-----IPQSPGRYSRGGPPAGG--------RNRGGRGGHDALVGTT 510
AY + P R + SPGR G GG R L G +
Sbjct: 621 PAYGSLLASPHPSRGMQQNVLASPGRQGGPGGYGGGGPAGAGMYSGRVSTQQDKMLEGRS 680
Query: 511 VKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRY--- 567
+ ++ GP++G RGRV+ VR+ELE+QMK VTVDRS ++ T P Y
Sbjct: 681 ITIKKGPFRGMRGRVISATATHVRLELEAQMKTVTVDRSHLALEDGGRTEAAPRPGYAYP 740
Query: 568 ------GMGSETPMHPS-----------RTPLHPYMTPMRDAGATPIHDGMRTPMRDRAW 610
G TPMHP TP HP MTP R+A +TP D AW
Sbjct: 741 AAPTPMAAGGRTPMHPGIHATPAHYSSHTTPAHPGMTPGREA-------LTKTPAYDAAW 793
Query: 611 NPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTP 670
TP P P + G+P A+ A TPG+ S G Y
Sbjct: 794 A-ATPAHPGVGGGGGAYPNA---------GTP---AF-ADTPGTVNPSPGGMGY------ 833
Query: 671 RDSSSTYVNAPSPYLPSTPG-----------GQPMTPNSASYLPGTPG-----GQPMTPG 714
+ Y +P+ Y PS G G P P + GTPG G P G
Sbjct: 834 ---GAQYAPSPAAYAPSPAGYAAAAGTPAVAGTPGMPGMYAAA-GTPGMYAAAGTPGVYG 889
Query: 715 TGGLDAMSPVIGADNEGPWFMPDILVRRSGEESVV------GVIREVLPDGSCRVVLGSS 768
+ A +P G G P R E VV +R V G+ V +G++
Sbjct: 890 AADMPAPTPGGGQGKYGGGGAPGASYRHWAEVEVVLPGGERAAVRSV-EGGTATVAIGAA 948
Query: 769 GNGDTITALP----------NEIEIVP-PRKTDKIKIMGGPHRGATGKLIGVDGTDGIVK 817
GD + + P ++++ P P I+++GG G G+L+G D DGIV+
Sbjct: 949 -QGDQVWSYPADAPTRSVAVGDMQLAPLPVGKSFIRVVGGELAGQYGQLVGTDSGDGIVR 1007
Query: 818 VDVSLDVKILDMAILAKLA-QP 838
+ D+KI+ +A + +LA QP
Sbjct: 1008 LGA--DIKIIKLAEIGRLAVQP 1027
>gi|452821558|gb|EME28587.1| RNA polymerase II transcription elongation factor SPT5 [Galdieria
sulphuraria]
Length = 1029
Score = 325 bits (833), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 258/874 (29%), Positives = 424/874 (48%), Gaps = 113/874 (12%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K + L S +A +HL+ Y+Y+EA VKEA GLR ++ + L+PI EM DVL++
Sbjct: 222 KKTPLDFFSAVAPEHLRGYVYVEAYTADSVKEAIDGLRILFPSTLKLIPIEEMVDVLSIV 281
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAK 126
+ + R WVR+ G Y GDLA+V D VTV+LIPR+DLQ + N+ E K
Sbjct: 282 PETSQVERGGWVRISRGTYAGDLAQVYDFREGETNVTVRLIPRLDLQEMRNE---DETDK 338
Query: 127 KKPFV---PPPRFMNVDEAREL-HIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKS 182
K+ V PP + +E ++ V RRD TG+ F+ ++DG LYK VS+++
Sbjct: 339 KRLSVNRRPPQKLFKREEVEQIVGSEVFPRRDRYTGEVFDVFRNENYRDGLLYKRVSIRN 398
Query: 183 I-SAQNIQPTFDELEKFRTPG---------ENGESDIA---------SLSTLFANRKKG- 222
I + + PTF+ELE F E+ + ++ SL TL ++ +K
Sbjct: 399 IVTGDEVAPTFEELEMFHKAQRLASDAKHVEDNQQELEDTMEKTLELSLDTLSSDVEKNM 458
Query: 223 HFMKGDAVIVIKGDLKNLKGWVEKVDEEN-VHIRP---EMKGLPKTLAVNSKELCKYFEP 278
+F GD+VIV+ GDLKNL G +E ++ +N V +RP E+KG + + + +EL KYF
Sbjct: 459 NFCVGDSVIVVSGDLKNLSGRIEAMESDNMVAVRPDDPELKG--ELIQFSKEELKKYFRE 516
Query: 279 GNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDY 338
G HVK ++G G TGMV+ + ++ + SD T E++R+ + E++E ++ + IG +
Sbjct: 517 GTHVKAINGRHTGETGMVVGISGDIITVFSDITNEEVRLHISQLTETTEESSSKSVIGSF 576
Query: 339 ELRDLVLL--DNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE-KKSNVQDR 395
EL DLV L D + GVI+R++ + +L V++ ++I+ KL+ K++ D
Sbjct: 577 ELLDLVTLHSDPRARGVIVRIQRDHATLLDTNGSNRTVSV---KDIRSKLDAKRAQALDM 633
Query: 396 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGS 455
N+ + V D+V++V+G K ++G + H+ +F++ + ++ G I ++ +C G
Sbjct: 634 NQKPLQVGDMVKVVQGVHKNREGSIRHVASPFVFVNVKDEPQNCGLIVVRAQNCQ--GPH 691
Query: 456 RANGDRNGDAYSRFNSLRTPPRIPQSPGRY----SRGGPPAGGRNRGGRGGHDALVGTTV 511
+G+ N + R+ + P G G D LV V
Sbjct: 692 SVHGNFNMTGQNSMKGATLSSMFSLGGNRFKTDATLSHPVYSGNIGKGHKEDDKLVRQDV 751
Query: 512 KVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI--SDNVVVSTPYRD-----T 564
++ GP+KGY G+VV SVRVEL+S K VTVDRS + D + + T
Sbjct: 752 LIKSGPWKGYIGKVVSATTASVRVELDSVCKTVTVDRSRVVPKDTAHLEKQKQSLQGAYT 811
Query: 565 PRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWE 624
P Y MGS+TP + + + TP+ G TP+ Y P +P D
Sbjct: 812 PSYEMGSQTPAYSGGSSM---ATPLHHVGYTPV---------------YAPFTPTLD--- 850
Query: 625 DGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPY 684
+ + P +P A+ TPG+ S+ G +SD G ++ SP+
Sbjct: 851 --------SGRRDAPRTPIHNAWRPTTPGAADYSS-GNKWSDLG---------LSMYSPF 892
Query: 685 LPSTPG---GQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVR 741
G + + N+A + +D V A W D+LV
Sbjct: 893 ASQETGLASQKTLAENNAI---------SESVDDKKVDHSLSVAKA-----WI--DVLVE 936
Query: 742 RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRG 801
+ ++ G + PDG + GN + +++++V P K+D IK++ G + G
Sbjct: 937 HKTKTTIRGYVGGHSPDGMYLQIELEDGNSGSYAL--SDMQMVAPEKSDVIKVVDGEYTG 994
Query: 802 ATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
G L+ +G +GIV+ + ++KIL ++ L K+
Sbjct: 995 MKGHLLNAEGDEGIVQFEDG-EIKILPVSSLGKI 1027
>gi|413944023|gb|AFW76672.1| hypothetical protein ZEAMMB73_018684 [Zea mays]
Length = 228
Score = 325 bits (832), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 160/233 (68%), Positives = 190/233 (81%), Gaps = 7/233 (3%)
Query: 605 MRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNY 664
MR RAW PMSPPRDNWEDGNP +WG+SP YQPG+P +R YEAPTPGSGWA+TPG ++
Sbjct: 1 MRSRAW---APMSPPRDNWEDGNPATWGSSPAYQPGTPQARPYEAPTPGSGWANTPGVSF 57
Query: 665 SDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPV 724
+DA TPRD+ Y NAPSPY+PSTP GQPMTPNSASYLPGTPGGQPMTPG G+D MSP+
Sbjct: 58 NDAPTPRDN---YANAPSPYVPSTPVGQPMTPNSASYLPGTPGGQPMTPGNAGMDMMSPI 114
Query: 725 IGADNEGPWFMPDILVR-RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEI 783
IG + E W +PD+LV SG + GV+REVL DGSCRV LGSSGNGD +T LPNE+E+
Sbjct: 115 IGGEGEATWLLPDVLVNVLSGGDDGPGVVREVLGDGSCRVALGSSGNGDMVTVLPNEVEV 174
Query: 784 VPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLA 836
+ P+K+DKIKI+ G RG TGKLIG+DG+DGIV++D + +VKILDM ILAKLA
Sbjct: 175 IRPKKSDKIKILNGSFRGHTGKLIGIDGSDGIVRLDDTYEVKILDMVILAKLA 227
>gi|325181255|emb|CCA15669.1| transcription elongation factor SPT5 putative [Albugo laibachii Nc14]
gi|325181812|emb|CCA16267.1| transcription elongation factor SPT5 putative [Albugo laibachii Nc14]
Length = 1095
Score = 321 bits (823), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 296/956 (30%), Positives = 446/956 (46%), Gaps = 163/956 (17%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M K +D +G L I+SVIA K +IY+EA++E+H K+A GLR+I + LVP++
Sbjct: 180 MNKYLDLARQGQPLFIKSVIASSS-KGFIYVEAERESHAKDAVNGLRDISLHTMKLVPVQ 238
Query: 58 EMTDVLAVESKAIDLSRDTWVRMK-IGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA 116
EMT VL ++ K L+ W R+K G +KGD+ KV+++ + R +K+IPR+D LA
Sbjct: 239 EMTSVLNLQKKRKPLAVGAWARIKRAGVFKGDICKVLEIVDNGARAIIKMIPRLDPSVLA 298
Query: 117 NKLEGREVAK-KKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLY 175
G E K KK PP + ++ + +H V RRR P TG+ + ++DGFL
Sbjct: 299 ----GGEAQKFKKGQRPPQKLLHTNM---VHGDVVRRRYPATGEMMDFYDNDYYQDGFLI 351
Query: 176 KTVSMKS-ISAQNIQPTFDELEKFRTPGE---NGESDIASLSTLFANRKKGHFMKGDAVI 231
K V++ + + + P DE+ KF E +G ++ + + K KGD V
Sbjct: 352 KEVNINMMLQTEEVNPRLDEINKFAAVAEREDDGNQELLASMETGDWKNKVELAKGDTVR 411
Query: 232 VIKGDLKNLKGWVEKVDEEN--VHIRPEMKGLPKT-LAVNSKELCKYFEPGNHVKVVSGT 288
V++GDL NL G V + N V + P + + T L K+L KY + G+H+KVVSG
Sbjct: 412 VVEGDLLNLMGIVVSTNTANNLVRVMPLHEEIKDTILDFQVKQLIKYVKVGDHIKVVSGM 471
Query: 289 QAGATGMVLKVEQH----VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLV 344
+G TG V+ V+ V I+L D+ ++I+V D+ ES+E++ G+ + EL DLV
Sbjct: 472 YSGETGTVVAVDDTEGAPVAIVLVDSMAKEIQVRVQDLQESAEISHGLDSLKGIELYDLV 531
Query: 345 LLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKL-EKKSNVQDRNKNTVAVK 403
L GV+ V + F+V +V V +EI+ KL ++ D+ N V+V
Sbjct: 532 ALAQGDVGVVTHVGRDGFKVYT---QGDQVCQVSDQEIQRKLASSRAAALDQKHNYVSVG 588
Query: 404 DVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG-SRANGDRN 462
++V ++EG G G V+HI+R LF+H+ + +AG A++ ++ G +R+N +N
Sbjct: 589 EMVNVLEGSHAGHAGTVKHIHRCFLFLHNNRVMTNAGMFVARAHQVILSGSKARSNMIQN 648
Query: 463 GDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYR 522
R N R PPR +R H+ ++G TVK++ G +KGY
Sbjct: 649 S-TLPRMNGAR-PPR-----------------NDRRNTREHE-MIGKTVKMKKGRWKGYI 688
Query: 523 GRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPR---YGMGSETPMHPSR 579
G VVD Q V+VE+ + V VDR + +D PR M TP+ PS+
Sbjct: 689 GIVVDESDQKVKVEIHCKATTVDVDRQEVVLAGTRQGQLQDKPRRIDTPMTGATPL-PSQ 747
Query: 580 TPLH-----PYMTPMRDAGATP-------------------------------------- 596
TPLH P TP+ + TP
Sbjct: 748 TPLHGSAMTPMATPLHRSLGTPQAARASDAWNIANDDALLETQMNQEEDITHATSFGAPL 807
Query: 597 -----IHDGM-------------RTPMRDRAWNPYTP-MSPPRDNWEDGNPGSWGTSPQY 637
+H+G+ ++P R+ A P+TP M+P PG +P
Sbjct: 808 EPVSSMHEGLASRSFGYSSMQSIKSPTREPA--PFTPKMNPTTPGLNPTTPGLLPRTPAL 865
Query: 638 QPGSPPSRAYEAP-TPG------SGWASTPGGNYSDAGT-PRD------SSSTYVNAPSP 683
GS P+ P TPG + ++TP GT PR + +N +P
Sbjct: 866 MMGSHPTTPGLHPMTPGLHPTTPAHLSATPAHTREVMGTEPRTPGFGVATPGIGLNPTTP 925
Query: 684 YL--------PSTPG--GQPMTPNSASYLPGTPG----------GQPMTP--GTGGLDAM 721
L P+TPG PM ++S L TPG G P+T + +
Sbjct: 926 SLATPGYQHNPTTPGLYRTPMNALASSELVATPGVPSGLVANGAGMPVTMPYSRQAHEIL 985
Query: 722 SPVIGADNEGPWFMPDILVRRSGEES--VVGVIREVLPDGSCRVVLGSSGNGDTITALPN 779
+P+ NE W M + VR + E+ +GVI V D LG +G+ T +
Sbjct: 986 NPI---SNEVTWKMKGVEVRVAITETNVSIGVIASVNGDS-----LGVEIDGNVHTYNVD 1037
Query: 780 EIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
++ V P K D + I+ G G TG LIG DG DGIVKVD D+KI + LAKL
Sbjct: 1038 CVQPVLPEKQDTVIILSGEEAGQTGSLIGTDGADGIVKVDGDADIKIYPLNSLAKL 1093
>gi|328869147|gb|EGG17525.1| transcription initiation factor Spt5 [Dictyostelium fasciculatum]
Length = 1072
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 267/885 (30%), Positives = 418/885 (47%), Gaps = 82/885 (9%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDL 72
I+SV+A H++ IYIEA++E HVK A +G+ I +M++P+++M ++L K+ DL
Sbjct: 202 IKSVLAPPHIQGQIYIEAEREMHVKHAIRGMPQIIYSGMMMIPLKDMIEILNRPRKSTDL 261
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKK-PFV 131
SR TWVR+++G YK DL ++ D D+ R R +VKLIPRIDL + E +KK PF
Sbjct: 262 SRGTWVRVRLGKYKDDLGQIWDYDSERGRCSVKLIPRIDLTVTPKGDDKDENGEKKSPFK 321
Query: 132 ------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISA 185
PP RF N E ++ +++ + G+ F +K+GF+YK + +KSI +
Sbjct: 322 RKAGLRPPQRFFNAKEMSDVQSISKKK---IFGETFTIYNNEKYKNGFIYKVMRIKSIVS 378
Query: 186 QNIQPTFDELEKFR--------TPGENGESDIA---SLSTLFA----------NRKKGHF 224
+ P+ +EL+KF+ + + DIA S S+ F + F
Sbjct: 379 DGVTPSLEELQKFQDRKENDDYNNDDEEDDDIAMDGSSSSAFGLLDASVIPKLSTSTIQF 438
Query: 225 MKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKV 284
KGD V VI+GDLK L G VE +D+++V I P GL + L EL KYF+ G+HVKV
Sbjct: 439 TKGDTVKVIEGDLKGLMGKVESIDDKSVIILPIHDGLNEPLVFPPSELQKYFKIGDHVKV 498
Query: 285 VSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLV 344
++G G TG+V++VE +LSD +++V D+ ++V+ G ++G+YEL DLV
Sbjct: 499 ITGRYEGETGLVMRVEDMTAYVLSDMNLGELKVRQQDLQGCTQVSEGRLELGNYELHDLV 558
Query: 345 LLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE-KKSNVQDRNKNTVAVK 403
G+I++VE ++F++L + V+ VKL+E+ K + + D N++ V
Sbjct: 559 QYGPQKIGIIVKVERDSFKILD---ETMNVSTVKLQEVLNKRNLRNATTTDSQSNSLVVN 615
Query: 404 DVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR---ANGD 460
D V IV+GP +GKQG + I R LF+ + E+ G +++ + G
Sbjct: 616 DAVEIVDGPYRGKQGSILRISRNFLFLKSKDVYENGGIFVVRANYSTLSGAKNRVGQGYG 675
Query: 461 RNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKG 520
+ + S G + G G GGRGG D+ + TV + G +KG
Sbjct: 676 QQQQQQQQQQSFNNGGGGRGGRGGFGGGAGGGRGGRAGGRGGPDSPLNKTVTITKGNWKG 735
Query: 521 YRGRVVDVKGQSVRVELESQMKVVTVDRSMI----SDNVVVSTPYRDTPRYGMGSETPMH 576
Y G V + V++EL+++ K +TV R I + + + S TPM
Sbjct: 736 YAGTVKECTETHVQIELQAKPKRITVPRGDILMEGARQQQDQWDQQQQMQLAYASRTPMR 795
Query: 577 PSRTPLHPYMTPMRDAGATPIHD---GMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGT 633
+ P TPMR + HD TPMR + + P
Sbjct: 796 EENPGMTPMRTPMRSNNNSGHHDPWSSSATPMRSTGSSNWYSDDMPSHGSGSSGGHQSNN 855
Query: 634 SPQYQPGSPPSRAYEAPTPGSGWA-------STPGGNYSDAGTPRDSSSTYVNAPSPYLP 686
S + + + TP + ++ STPG + + R +T ++ P+P
Sbjct: 856 SNNNNNNNNNNNNNDWSTPQTSYSNFSPFNPSTPGSDMHN----RHDYTTPISIPTPQSY 911
Query: 687 STPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAM-----SPVIGADNE-----GPW--F 734
TP TP++ Y TP P +P T +P D E PW
Sbjct: 912 ETP-----TPSNYHYDQQTPLDVPQSPFTPHAPQTPATPSTPSTNEDQEDEIDNSPWQGI 966
Query: 735 MPDILVRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKI 794
+ + +G+ VV +G C V S+ N +E+E+V P K + + I
Sbjct: 967 GFQVTYKANGDLGVVTTNS----NGFCSVDFLST-NKKMSNIAQSELELVVPSKKELVVI 1021
Query: 795 MGGPHRGATGKLIGVDG----TDGIVKVDVSLDVKILDMAILAKL 835
+ GPH TG L + + GIVK+D +LD K+L MA L KL
Sbjct: 1022 LRGPHATQTGSLFVITTAQSYSSGIVKMDTNLDFKVLKMANLGKL 1066
>gi|332029066|gb|EGI69080.1| Transcription elongation factor SPT5 [Acromyrmex echinatior]
Length = 1072
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 267/895 (29%), Positives = 426/895 (47%), Gaps = 110/895 (12%)
Query: 4 CIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTD 61
C + QI+SV+A + +K YIYIEA K++HVK + +R++ + K +VPI+EM +
Sbjct: 219 CQNSSEPFQIKSVVAPERVKGYIYIEAYKQSHVKVVIENVRSLRMGTWKQEMVPIKEMIE 278
Query: 62 VLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID-------LQA 114
VL V+ + L WVR+K G Y+ DLA++V +D + +V +KL+PRID L+
Sbjct: 279 VLRVKEQT-HLKPKQWVRVKRGIYQDDLAQIVYIDLAQNQVHLKLLPRIDYSRFRGVLRT 337
Query: 115 LANKLEGREV--------AKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGG 166
+ NK +V KKPF P +R G+++ G
Sbjct: 338 IQNKCIESDVLKRKKNKKPAKKPFNPEA------------VRAVGGEITKNGNFYIFEGN 385
Query: 167 MLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASL--STLFANRKKGHF 224
GFLYK + +I +++ PT ELEKF +N E D S F + F
Sbjct: 386 RYNHKGFLYKNFFINNIMVEDVIPTLSELEKFEEAPQNVEIDSNDTPGSGTFEKNQLHSF 445
Query: 225 MKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKV 284
GD VI+ +G+L NL+G + ++ + + P+ K L + L +++ EL KYF G+HVK+
Sbjct: 446 NNGDNVIICEGELTNLQGKIVSINGNTIMVMPKHKELNEVLELHASELRKYFTQGDHVKI 505
Query: 285 VSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLV 344
+G G TG++++VEQ+ +++ SD T ++ V D+ S++ TG+ +G ++ DLV
Sbjct: 506 TAGRYEGDTGLIVRVEQNRIVLFSDLTMHELEVLPRDLQLCSDMATGVDSLGKFQWGDLV 565
Query: 345 LLDNNSFGVIIRVESEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTV 400
LD + G+I+R+E E F VL K + RP+ A+ K RE + + D ++T+
Sbjct: 566 QLDAQTVGIIVRLEHENFHVLSIHGKVIEVRPQ-AVTKRRE-----SRNTIALDFRQSTI 619
Query: 401 AVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGD 460
KD+V++V+GP G+ G ++H+YR F+H + +++ G K+ + GG++
Sbjct: 620 RKKDIVKVVDGPHTGRGGEIKHLYRSFAFLHSKMFVDNGGIFVCKTRHLQLSGGNKTTSI 679
Query: 461 RNGDAYSRFNSLRTPPRI--PQSPGRYSRGGPPAGGRNRGGRGGHDA-----LVGTTVKV 513
+ + F S PRI P P G GGR RG GG A L+GTT+K+
Sbjct: 680 NSMSPVAGFMS----PRIASPMHPSGGGFGRGGGGGRGRGRGGGGGARRDRELIGTTIKI 735
Query: 514 RLGPYKGYRGRVVDVKGQSVRVELESQMK-----VVTVDRSMISDNVVVSTPYRDTPRYG 568
GPYKG G V D + RVE S + VV + ++ +V P R+
Sbjct: 736 TGGPYKGNVGIVKDATETTARVERHSTCQTIRGFVVLKSQRLVIKKELVVLPATTKLRFM 795
Query: 569 MGSETPMHPSRT---PLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDN--- 622
+ RT LH TP T HDG RTP + AW+P +P N
Sbjct: 796 DSVDRRRCIRRTHQKHLHGSRTPHYAGSMTSSHDGSRTPGQSEAWDPTISNTPVSTNDFE 855
Query: 623 -WEDGNPGSWGTSPQYQPGSPPSRAY---------EAPTPGSGW-----ASTPGGNYSDA 667
++ GSW P SP ++ T GS +S NY
Sbjct: 856 EYKMEKGGSWVGYP--SENSPTEGSFIPQTSIMYGSEQTYGSCHSSPIESSIVNSNYESC 913
Query: 668 GTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S+ Y+++ + +L +PG Y+P P +TP G + A
Sbjct: 914 SASSSTSTGYISSYNAFLTPSPG---------DYIPSNPYN-LLTPRLG--------MNA 955
Query: 728 DNEGPWFMPDILVR-RSGEESVV-----GVIREVLPDGSCRVVLGSSGNGDTITALPNEI 781
D+ W DI VR R+ + + GVIR+V D C V L ++ + ++
Sbjct: 956 DDNSNWHTTDIEVRIRNTHDDLALVGQKGVIRQVFGD-ICTVYLPMENRA--VSIVRRQL 1012
Query: 782 EIVPPRKTDKIK-IMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+ V P D++K I+G +R A G L+ +D +G+VK+ ++K + L K+
Sbjct: 1013 DFVVPSCGDRVKVILGEENREAVGTLLSIDYQEGVVKLTTD-EIKFVQFRFLGKM 1066
>gi|357602005|gb|EHJ63237.1| hypothetical protein KGM_02129 [Danaus plexippus]
Length = 1036
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 269/872 (30%), Positives = 407/872 (46%), Gaps = 125/872 (14%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
QI+SV+A + +K +IYIEA K+ HVK + N+ + K +VPI+EMTDVL V +
Sbjct: 242 FQIKSVVAPEGVKGFIYIEAYKQTHVKAIIDKVGNLRMGTWKQEMVPIKEMTDVLRVVKE 301
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V VD + +V +KL+PRID L L E
Sbjct: 302 QSGLKPKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRLRGALRTVQSESEA 361
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK P + + + R + V GD+ G + GFLYK +M +I
Sbjct: 362 AKRKKKRRPAAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTMSAI 416
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGW 243
A+ ++PT ELE+F E + ++A+ + F GD V V GDL NL+
Sbjct: 417 LAEGVKPTLTELERFEEQPEGIDIELAAPAKDDPTSLHS-FSMGDNVEVCSGDLANLQAR 475
Query: 244 VEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHV 303
+ +D + + P L L EL KYF+ G+HVKV++G G TG++++VE H
Sbjct: 476 IIAIDGSMITVMPRHDALKDPLVFKPNELRKYFKQGDHVKVLAGRYEGDTGLIVRVEPHR 535
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQ 363
+++SD T ++ V D+ S++ TG+ +G ++ D+VLLD+ + GVI+R+E E F
Sbjct: 536 AVLVSDVTMHELEVLPRDLQLCSDMATGVDSLGQFQWGDMVLLDSQTVGVIVRLERENFH 595
Query: 364 VL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGP 419
VL K + +P+ AL K RE + + D N++ KD+V++++GP G++G
Sbjct: 596 VLGMQGKVIECKPQ-ALQKRRENRFTM-----ALDSEHNSIQKKDIVKVIDGPHAGREGE 649
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIP 479
++H+YR F+ R + ++ G K+ + GG++ NG A + + PRI
Sbjct: 650 IKHLYRNFAFLQSRMYPDNGGIFVCKTRHLQLAGGAKNAAASNGLALAFMS-----PRI- 703
Query: 480 QSPGRYS---------RGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKG 530
QSP S RGG A R+R L+G T+ D G
Sbjct: 704 QSPMHPSGRGGGRGRGRGGRGAVARDR-------ELIGQTIN-------------RDATG 743
Query: 531 QSVRVELESQMKVVTVDRSMISD----NVVV---STPYRDTPRYGMGSETPMHPS---RT 580
+ RVEL + + ++VDR I+ N + ++ Y TP G+ TP + +T
Sbjct: 744 STARVELHTMCQTISVDRGHIAAAGGPNGIARGGASSYGRTPMRA-GAHTPTYREAGLKT 802
Query: 581 PLHPYMTPMRDAGA--------TPIHDGMRTPMRDRAWN--PYTPMSPPRDNWEDGNPGS 630
PL TP+ +AGA TP H+G RTP AW+ +TP P D
Sbjct: 803 PLQGNATPIYEAGARTPHYGSSTPAHEGGRTPAHP-AWDAAAHTP-RPDHDLLLASASPP 860
Query: 631 WGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPG 690
S + + + TPG+ + S TY SPY PS
Sbjct: 861 PAASSSHYDAAYQQGPFTPQTPGTMYG---------------SDHTY----SPYRPSPS- 900
Query: 691 GQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVR-RSGEE--- 746
PGT G TP SP D + W PD+ VR R G E
Sbjct: 901 ------------PGTYAGYLATPSPAPYSPRSPYTAEDADD-WHAPDLEVRVRGGAEPGL 947
Query: 747 -SVVGVIREVLPDGSCRVVLGSSGNGDTITALPNE-IEIVPPRKTDKIKIMGGPHRGATG 804
G +R V +C V L D + LP +E V P D++K++ G R A G
Sbjct: 948 RGQAGALRSV-SGATCAVYLPLE---DRVLNLPAHLLEPVVPHSGDRVKVIAGEDREAVG 1003
Query: 805 KLIGVDGTDGIVKVDVSLDVKILDMAILAKLA 836
+LI ++ +G+VK S D+KI+ + L K+A
Sbjct: 1004 QLISIENQEGVVKFG-SDDIKIMQLRHLCKMA 1034
>gi|149391811|gb|ABR25840.1| transcription elongation factor spt5 homolog 1 [Oryza sativa Indica
Group]
Length = 219
Score = 313 bits (801), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/227 (70%), Positives = 186/227 (81%), Gaps = 10/227 (4%)
Query: 541 MKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDG 600
MK+VTV R I+D V+TP+R+ PRY +G ETPMHPSRTPLHPY TPMRD GATPIHDG
Sbjct: 1 MKIVTVKRDDIADTPTVATPFRE-PRYPLGGETPMHPSRTPLHPYQTPMRDPGATPIHDG 59
Query: 601 MRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTP 660
MRTPMR R W PMSPPRDNWE+GNP +WG+SP YQPG+PP+R YEAPTPGSGWA+TP
Sbjct: 60 MRTPMR-RGW---APMSPPRDNWEEGNPATWGSSPAYQPGTPPARPYEAPTPGSGWANTP 115
Query: 661 GGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDA 720
G +Y+DA TPR+S+ Y NAPSPY+PSTP GQPMTPNSASYLPGTPGGQPMTPG G+D
Sbjct: 116 GVSYNDAPTPRESN--YGNAPSPYVPSTPVGQPMTPNSASYLPGTPGGQPMTPGNVGMDI 173
Query: 721 MSPVIGADNEGPWFMPDILVR--RSGEESVVGVIREVLPDGSCRVVL 765
MSP+IG + EG W +PD+LV R+G++ GV+REVL DGSCRV L
Sbjct: 174 MSPIIGGEGEGNWLLPDVLVNVLRAGDDG-PGVVREVLADGSCRVAL 219
>gi|159463654|ref|XP_001690057.1| global transcription factor [Chlamydomonas reinhardtii]
gi|158284045|gb|EDP09795.1| global transcription factor [Chlamydomonas reinhardtii]
Length = 1188
Score = 312 bits (800), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 183/472 (38%), Positives = 279/472 (59%), Gaps = 29/472 (6%)
Query: 1 MQKCI---DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
+QKC ++G+ L+I S +ALDHL +IY+EA KE+HV +A +GLR +Y + LVP+
Sbjct: 189 LQKCYTMAERGTPLRIMSAVALDHLPGFIYVEAAKESHVMDAIRGLRTVYIGRGAKLVPL 248
Query: 57 REMTDVLAVESKAID-LSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL 115
EM D + V KA D ++RDTWVR++ G YK DLA+VV+VD+V R VKL+ R+D +
Sbjct: 249 NEMVDAVTVNKKAKDDMARDTWVRVRSGLYKDDLARVVEVDSVAGRAVVKLLHRLDFNQM 308
Query: 116 ANKLEGREVAKKKPF------VPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF 169
AN+ E E KK PF P + N +EAR + V+R ++ + F
Sbjct: 309 ANRTE--EQRKKNPFGRAPTVRPSAKVFNPEEARVAGLLVQRLPAEQGMPCYQVLS-HKF 365
Query: 170 KDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIAS--LSTLFAN-------RK 220
G+L + V +K+++ + P +E+ +F G+ D + LS+L A
Sbjct: 366 VGGYLERRVGIKTLTVLDTLPGLEEVARFNAAASTGDDDAPATDLSSLMATLPTDGTAAT 425
Query: 221 KGHFMKGDAVIVIKGDLKNLKGWVEKV--DEENVHIRPEMKGLPKTLAVNSKELCKYFEP 278
KG FMKGD V ++KGDL+NL V V D V P++KG + + + EL K FE
Sbjct: 426 KGTFMKGDTVRIVKGDLENLTARVTGVSADGTKVTAVPDIKGFGEEVEFDMDELAKVFEV 485
Query: 279 GNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDY 338
G V+V++G G TGMV++VE+ + ++SDTT+E+I+VFA D+ ES V +GI +G+Y
Sbjct: 486 GQRVRVLAGQYGGDTGMVVRVEETLCYLISDTTREEIKVFARDLTESDVVASGIEMLGEY 545
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVL--KGVPDRPEVALVKLREI--KCKLEKKSNVQD 394
+L DLV ++ N+ GVI+++E +A +VL G PD+P+V L +L +I K ++K QD
Sbjct: 546 QLHDLVQINQNTAGVIVKIEKDAARVLTSNGTPDQPDVRLCRLPDIQRKVTFKQKPITQD 605
Query: 395 RNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKS 446
+ N V KD V ++ G K + G V I+RG LF+H + E+ G++ +S
Sbjct: 606 QGGNQVKEKDWVIMLNGRMKERGGSVAFIWRGTLFLHCKDVTENGGYVAVRS 657
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 181/427 (42%), Gaps = 108/427 (25%)
Query: 502 GHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELES-----------QMKVVTVDRS- 549
H VG V+V GPY GYRGRV V++EL++ +++ V RS
Sbjct: 775 AHSQYVGKVVRVTKGPYNGYRGRVKQQTATHVQLELDAVAGRPVTVPMEYVQLGDVPRSG 834
Query: 550 MISDNVVVSTPYRDTP---------------RY------GMGSETPMHPSRTPLHPYMTP 588
++ V YR P RY G +TP H S TP HP MTP
Sbjct: 835 TMAAAVSAEGGYRAGPSGGAYAGGRGGPSDNRYPPQTPAHPGMQTPAHYSMTPAHPSMTP 894
Query: 589 MR------DAGATPIHD--------------GMRTPM--------------RDRAWNP-- 612
A TP H G PM + +A+ P
Sbjct: 895 AHAPYTPAHAPYTPAHHTSGENDDYYGDELPGRHQPMTAPTPGYGGTAHTPQQQAYTPAL 954
Query: 613 ----YTPMSP-----PRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGN 663
YTP P P D+ G G+ +P PG + APTPG A TPGG
Sbjct: 955 TPQGYTPQEPMHAPTPADHHHHGVAGTPNLAP--TPGLARTPYLPAPTPGVDAAPTPGGG 1012
Query: 664 YSDAG-TPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMS 722
+ +AG TP +++T TPG TP +A TP G TPGT GL+A +
Sbjct: 1013 HYEAGYTPGTNAAT----------GTPGLTAPTPANAYTPAFTPSGHAYTPGTPGLEAGT 1062
Query: 723 P-VIG-ADNEGPWFMPDILVRRSGEESVVGVIREVLPDGSCRVVLG-----SSGNGDTIT 775
P V+G ++ G W + V SG +VV R DG+C V G S + D
Sbjct: 1063 PAVVGVVEDFGTWASILVQVPGSGRYAVV---RAAGSDGTCSVQPGNYAPDSGFSADASA 1119
Query: 776 ALPNE----IEIVPPRKTDKIKIMGGPHR---GATGKLIGVDGTDGIVKVDVSLDVKILD 828
AL + +V P K DK+K++ + G TG LIG+D DGIVK DVS D+KILD
Sbjct: 1120 ALETHDARALAVVRPSKRDKVKVIKAESQDVLGVTGTLIGIDNADGIVKCDVSNDMKILD 1179
Query: 829 MAILAKL 835
M LAK+
Sbjct: 1180 MTFLAKV 1186
>gi|193605997|ref|XP_001951771.1| PREDICTED: transcription elongation factor SPT5-like [Acyrthosiphon
pisum]
Length = 1066
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 252/847 (29%), Positives = 406/847 (47%), Gaps = 71/847 (8%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
L+I+S+++ + +K YIYIE+ K+ HVK A + + ++ K +VPI+EMTDVL V
Sbjct: 230 LKIKSIVSPEGVKGYIYIESYKQTHVKSAIENVSSLKMGFWKQQMVPIKEMTDVLKVVKV 289
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ----ALANKLEGREV 124
L WVR+K G YK D+A+V VD + V +KL+PRID AL ++ +
Sbjct: 290 QTGLRSKQWVRLKRGLYKDDIAQVDYVDLAQNHVHLKLLPRIDYTRPRGALRASMDAEAL 349
Query: 125 AKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
+KK P + + + R + V GD+ G + GFLYK M +I+
Sbjct: 350 KRKKKRRPAAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFYMNAIT 404
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
A ++PT ELEKF E + ++ +S + GD V V G+L NL+G V
Sbjct: 405 ADGVKPTLSELEKFEEAPEGIDIELP-VSNKDNSANSQSLSSGDNVEVCTGELINLQGKV 463
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
+D + V I P+ L L + EL K+F+ G+HV+VV G G TG++++VEQ+ +
Sbjct: 464 LSIDGDMVTIMPKHDDLKMPLEFMANELRKFFKQGDHVRVVGGRYEGDTGLIVRVEQNRI 523
Query: 305 IILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
++ SD T ++ V D+ S++ +G+ +G ++ DLV LD + GVI+R+E E +
Sbjct: 524 VLFSDVTMHELEVLPRDLQLCSDMASGVDSLGQFQWGDLVQLDPQNVGVIVRIEREKMHI 583
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
L ++ K + + K E ++ + D +++ KD+V++++GP G G ++H+
Sbjct: 584 LNMA---GKLVEAKPQSLNKKKEHRNTIGVDALGSSIQRKDIVKVIDGPHTGMHGEIKHL 640
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR----ANGDRNGDAYSRFNSLRTPPRIP 479
YR F++ R ++ G + + G S +NG A + S R P P
Sbjct: 641 YRHHAFLYSRLMTDNGGIFVCRLRHIALAGNSTNKQALTAPQNGFASPQITSPRHTPGSP 700
Query: 480 QSPGRYSRGGPPAGGRNRGG-------RGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQS 532
G GG G G R D L+G T+++ GPYKG G V D +
Sbjct: 701 FGAGGGGSGGGGGGRGGGGSGGRFGGVRRDRD-LIGQTIRITGGPYKGAVGMVKDATECT 759
Query: 533 VRVELESQMKVVTVDRSMISDNVVVSTPYRD----------------TPRYGMGSETPMH 576
RVEL S + ++VDR I+ +V P +D TP Y G +TP+
Sbjct: 760 ARVELHSSCQTISVDRRNIT---IVGQPSKDGRLTSSYSRTPANVMMTPGYREGGKTPIQ 816
Query: 577 PSRTPLHPYMTPMRDAGA-TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGN-PGSWGTS 634
S TP + G+ TP HDG +TP +AW+P +P R D P GT
Sbjct: 817 GSMTPNYEVGNRTPHFGSMTPSHDGSKTPT--QAWDPAAGYTPARVTDSDLEYPMDPGTP 874
Query: 635 PQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGG--Q 692
P + + + +P + + GG Y +SS++Y N PSP S+P
Sbjct: 875 YAQTPNTIYGSSDHSYSPYQAISPSGGGGY-------NSSNSYANTPSPINTSSPRSIYH 927
Query: 693 PMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGP-WFMPDILVRRSGEESV--V 749
P S SY +PG +P + + P W DI VR + +
Sbjct: 928 PAPSPSGSYASLMTPSSVSSPGLA-----APSLTSFGLPPGWQTTDIFVRIADSDLAGQT 982
Query: 750 GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGV 809
G+IR+V + +C V L +T + +E + P+ +D +K++ G +R TG ++ +
Sbjct: 983 GIIRDV-SEATCSVYLPEEER--VVTIENDNLEPIMPKPSDYVKVLCGSYRDRTGNMMAI 1039
Query: 810 DGTDGIV 816
+G++G+V
Sbjct: 1040 EGSEGVV 1046
>gi|156553711|ref|XP_001600437.1| PREDICTED: transcription elongation factor SPT5-like [Nasonia
vitripennis]
Length = 1106
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 220/721 (30%), Positives = 368/721 (51%), Gaps = 56/721 (7%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVE 66
S L I+S +A +K +IYIEA K+ HVK A + + N+ K +VP+ EM DVL V
Sbjct: 272 SPLVIKSAVAPKGIKGFIYIEAYKQVHVKAAIENVNNLKLGFWKQQMVPLNEMVDVLRVT 331
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL----EGR 122
S +I++ + WVR+K G YK DLA+V ++ + +V ++L+PRID Q L L E
Sbjct: 332 S-SINIKPNQWVRIKRGIYKDDLAQVDYIELAQNKVHLRLLPRIDYQKLRGALRLMSEEA 390
Query: 123 EVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKS 182
E K+K PP + + + R + V GDY G + GFL+K ++ +
Sbjct: 391 ESTKRKKTRPPAKPFDPEAIRSIGGEVTS-----NGDYLVFEGNHYSRKGFLFKHFNINA 445
Query: 183 ISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRK---KGHFMKGDAVIVIKGDLKN 239
I ++ I+PT +E+E F EN + +++ K +F GD V V +G+L +
Sbjct: 446 IRSEGIKPTLEEIEHFEDSPENIDIELSDAPATGPGAKFDQMCNFSTGDKVKVNEGELIH 505
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
L+G + +D + + P + L + + ++EL KYF G+HVKV++G G TG+++++
Sbjct: 506 LQGKIVSIDGNKIMVMPSHEELNEPIEFMARELRKYFNIGDHVKVLAGKYEGDTGLIVRI 565
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
E++ +++ SD + ++ V ++ ++ +G+ ++G ++ DLV L+ + GVI+R+E
Sbjct: 566 EENRIVLFSDVSMHELEVLPINLQLCPDMASGVDRLGKFQWGDLVQLEPQTVGVIVRLER 625
Query: 360 EAFQVLK---GVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGK 416
+ FQVL V V+L K E + + D ++++ KD+V++++GP G+
Sbjct: 626 DNFQVLSMHGNVVQASPVSLTKYNE-----NRNTTALDMYQDSIRRKDIVKVLDGPHSGR 680
Query: 417 QGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPP 476
+G ++H+YR F++ + ++ G K+ +VGG ++ + + + +P
Sbjct: 681 EGEIKHLYRNFAFLYSKVYIHSGGIFVCKTRHLQLVGGLKSKKELIAELTNY--PFASPT 738
Query: 477 RIPQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRV 535
R SP + +G G D L+GTT+++ GPYKG G V D +VRV
Sbjct: 739 RSDVSP-QQEKGKARVHSSFGGSYPTRDKKLIGTTIRITGGPYKGNIGFVKDATESAVRV 797
Query: 536 ELESQMKVVTVDRSMISDNVVV---STPYRD----------TPRYGM---GSETPMHPSR 579
EL S + ++VDRS I + + TP + TP YG GS+TPMH S+
Sbjct: 798 ELHSPCQTISVDRSHIMNLAQLGPNGTPRNNYTPTYSAGGRTPMYGARQDGSKTPMHGSQ 857
Query: 580 TPLHPYMTPMRDAGA--------TPIH-DGMRTPMRDRAWNPYTPMSPPRDNWED-GNPG 629
TP+ TPM D G+ TP H +G TP AW+P +P R++ D +P
Sbjct: 858 TPMQGAQTPMYDTGSRTPYYGSITPSHSEGGNTPRNTGAWDPTVANTPARNSEYDLDDPD 917
Query: 630 SW-GTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPST 688
SP YQ + Y+ S S + S TP S ++ +P+ Y PS+
Sbjct: 918 DAPSASPMYQESQSSNSMYDPDPSASPMMSVVSPSRSGGITPSHSDMGFM-SPN-YTPSS 975
Query: 689 P 689
P
Sbjct: 976 P 976
>gi|326433915|gb|EGD79485.1| hypothetical protein PTSG_12984 [Salpingoeca sp. ATCC 50818]
Length = 1092
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 279/897 (31%), Positives = 406/897 (45%), Gaps = 117/897 (13%)
Query: 1 MQKCIDKGSELQIRSVIALDHLK-----NYIYIEADKEAHVKEACKGLRN-IYSQKVM-L 53
MQ + KG L I+SVI + +YIY+EA HVK A G+ +Y Q L
Sbjct: 242 MQAAM-KGEPLAIKSVIGYRQQRVVGGRSYIYVEAYSREHVKHAIAGIEELVYGQWTQEL 300
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQ--RVTVKLIPRID 111
V + +L V+ + I++ + WVR+K G Y DLAKVV V+ RV V L+PRID
Sbjct: 301 VEMEARPALLRVKKRKINVKPNQWVRIKRGIYANDLAKVVRVNATVDPPRVEVHLVPRID 360
Query: 112 LQALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDY-FENIGGMLFK 170
L K R+ F PP R N DE + E D + +Y FEN +
Sbjct: 361 LTPQRRKKNARK------FRPPQRLFNRDEIDQAIPDAEVMWDSLRDEYRFEN--NAYTE 412
Query: 171 DGFLYKTVSMKSISAQNIQPTFDELEKFR-TPGENGESDIASLSTLFANRKKGHFMKGDA 229
GFL K + + + I+PT +EL F T + E ++ +L + F GD
Sbjct: 413 SGFLIKRIPISGVLTSAIKPTLEELSMFEMTEDAHVEMELPDEPSL-----QPAFAVGDR 467
Query: 230 VIVIKGDLKNLKGWVEKVD--EENVHIRPEMKGLPKT----LAVNSKELCKYFEPGNHVK 283
V V+ GDLKNL G + ++ + V IRP+ L KT + + E+ K F G+ VK
Sbjct: 468 VEVVGGDLKNLTGEILSINASSQQVEIRPDSDELKKTGITRIPLPISEVRKAFHMGDQVK 527
Query: 284 VVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDL 343
V G G TG+VL+V + +LSD + ++IRV A D+ ++ V +G +G + L DL
Sbjct: 528 VNHGRYKGETGLVLRVTDDFVSVLSDLSLKEIRVLASDLEMTTTVASGRDVLGQFRLHDL 587
Query: 344 VLLDN-NSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKS-NVQDRNKNTVA 401
V +N N G IIR+E+E ++L R + V+ +E++ + + S D+++N +
Sbjct: 588 VQFNNANVVGCIIRIENEQLKILD---QRGQERDVRPQEVRPRQRRGSPQALDKHQNVIG 644
Query: 402 VKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR 461
V+ V+GP KG++G V HI+R +F+ L+ G A ++ VVG S
Sbjct: 645 TGLSVKAVDGPNKGREGKVLHIHRRFVFVRQPSILDRGGIFVANANHLQVVGASTRPAAN 704
Query: 462 NGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGY 521
A S PR S GGR RGGR D L V V GP+KG
Sbjct: 705 MTGAES--------PRAVLSRSTGGAAPRGGGGRGRGGRPRRDPLFHKLVIVTSGPHKGK 756
Query: 522 RGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVV--STPYRDTPRYGMGSETPMHPSR 579
+G V D + R+EL+S + +TVDR I + + +T TP G H ++
Sbjct: 757 QGIVKDATPTNARIELQSLCRTITVDRQAIKEASTLNRATTSLSTPFGGPQMGGVQHGAQ 816
Query: 580 TPLHPYMTPMRDAGATPIHDGMRTP---------------MRDRAWNPYTPMSPPRDNWE 624
TPL+ TP TP + G TP D AWNP P +P D
Sbjct: 817 TPLYGAQTPSYGGSRTPHYTGSETPRLGAETPGSRTPGYDYNDSAWNPNVPNTPAPDTPA 876
Query: 625 DGNP-----GSW-------------------GTSPQYQPGSPPSRAYEAP-TPGSGWAST 659
+P W G + QP +P R+Y A TP W S
Sbjct: 877 GRSPAFQQTAEWDVSDVTSEPASVRAETPHAGPATPGQPNTPGDRSYNAAFTP--AWESG 934
Query: 660 PGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLD 719
G+ AGTP + +P STPG P TP +++P TPG T G GG
Sbjct: 935 YSGSTPTAGTP-----GFGAPATPGTGSTPGMPPATP--GTHMPATPGEAVGTSGAGG-- 985
Query: 720 AMSPVIGADNEGPWFMPDILVR--RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITAL 777
PW +P + VR SG++ + + GS V L +G TA
Sbjct: 986 -----------APWLVPTVSVRVVSSGQQGTISNVD----GGSVSVAL---DDGSATTAP 1027
Query: 778 PNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAK 834
++ + P K D++ +M G +G G L+ +DG +G+VK +KI+ MA L +
Sbjct: 1028 AEDLTPIDPVKNDRVYVMEGDQQGMRGMLVSIDGVEGVVKFFDPPSLKIIPMAQLTR 1084
>gi|328773043|gb|EGF83080.1| hypothetical protein BATDEDRAFT_84603 [Batrachochytrium dendrobatidis
JAM81]
Length = 1068
Score = 300 bits (768), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 282/924 (30%), Positives = 426/924 (46%), Gaps = 154/924 (16%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L+I SV + D L+ Y+YIEA K+AHV A +G+ NIY K+ LVP+ EM D L+++ K +
Sbjct: 195 LEILSVFSRDSLQGYVYIEAMKQAHVMAAIQGVNNIYVSKLQLVPVNEMVDCLSIKGKTL 254
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL------QALANKLEGREV 124
DL + WVR+K G Y GDLA+V++V VKLIPR++ Q + + +G +V
Sbjct: 255 DLKTNAWVRVKRGRYDGDLAQVLEVAESGDTALVKLIPRLEPARGTLGQVQSRRKKGTDV 314
Query: 125 AKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
+ + P F RE I GD+F+ KDG+L KT+ + S+
Sbjct: 315 RQPQKLFQPSDF----NKRE--INAGNGGYTYQGDFFD-------KDGYLEKTMKVTSLL 361
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+ + PT DE+ KF N +++ +L F G+ + VI G+LKN+ G +
Sbjct: 362 TEMVNPTLDEITKFSGGSINEQNNDLALLASANQATTDDFQIGEGITVISGELKNVPGVI 421
Query: 245 EKVDEENVHIRPEMK-GLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHV 303
+ ++ V + P+ GL L ++++ K FE GNHVKVV G TG+++K++ +V
Sbjct: 422 QSIEGGIVTVIPDKSFGLSGPLRYPARDIAKRFEEGNHVKVVGGVHKDETGLIVKIDNNV 481
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQ 363
+ ILSDT+ I VF+ D+ +SEV+ T +G Y+ DLV L + GVI+++E +
Sbjct: 482 VTILSDTSLNPISVFSKDLRTASEVSAVGTSLGQYDTLDLVQLSASDVGVIVKIEKDILL 541
Query: 364 VLKGVPDRPEVALVKLREIKCKLEKKSNV-QDRNKNTVAVKDVVRIVEGPCKG--KQGPV 420
+L + + VK ++I+ K + V D + V D V +V P + G V
Sbjct: 542 ILNQYGN---LLRVKPQQIQSKRDSSRAVTSDSHARPVTAGDHV-VVSDPSSTIKRSGTV 597
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG--------SRANGDRNGDAYSRFNSL 472
HI+R +F+ R +E G I A++S+ VV+GG S A G G+AY+ + +
Sbjct: 598 LHIFRSHVFVKSREIVEDNGIIVARNSNLVVMGGKVPMPAFGSHAPGAGRGNAYNPYAAS 657
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQS 532
+S G G GR R D VG TV + GPYKGY G V D
Sbjct: 658 TGLAGQGRSGGPGGMGRGRGRGRGR------DEFVGKTVTICGGPYKGYLGIVKDATETH 711
Query: 533 VRVELESQMKVVTVD-----------RSMISDNVVVSTPYRDTPRY----GMGSETPMHP 577
RVEL + K + ++ RSM S Y D RY MGS TP +
Sbjct: 712 ARVELHTGNKTINMEKTKLSMHGAESRSMQSQVNAGYNGYAD--RYDRNSNMGSRTPSYS 769
Query: 578 -SRTPLHPYMT------PMRDAGATPIHD-GMRTP------------------------- 604
S+TP++ T P D G TP D G RTP
Sbjct: 770 GSKTPMYRSNTESATPNPHMDGGRTPAWDSGSRTPAWNASSKTPAWEASSRTPARPDSFF 829
Query: 605 -----------MRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSR--AYEAP- 650
+ D A PY P +P D + GT PG+ PS A+ P
Sbjct: 830 PGADHMPYQNALADNADTPYIPSTPAVDGMHGQSHNVTGT-----PGAYPSTPAAHNLPQ 884
Query: 651 TPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPG--GQPMTPNSASYLPGTPGG 708
TP G GG Y + G+ P+ LP TP P P++ + + G G
Sbjct: 885 TPLGGI----GGQYPNMGS----------VPNTGLPQTPFVPATPFNPSTPANVHGDYYG 930
Query: 709 QPMTPGTGGLDAMSPVIGADNEGPWFMPDILVR----------RSGE-ESVVGVIREVLP 757
P GG+D V ++N W I VR R G+ + I+ V
Sbjct: 931 SP----NGGMD----VHVSEN---WLCVGIEVRIIQSQTGRRFRDGQYDGRRAAIKTVEQ 979
Query: 758 DGSCRVVLGSSGN-----GDTITALPNE-IEIVPPRKTDKIKIMGGPHRGATGKLIGVDG 811
+L G G+ I+ +P+E + + P K + K++ G +R TG L+ +D
Sbjct: 980 GNRNAQILFLDGGVDGHGGEVISGVPDECLGPIHPEKKEAFKVLKGEYRDYTGVLLSIDM 1039
Query: 812 TDGIVKVDVSLDVKILDMAILAKL 835
+G+V++D D+ ++DM+ LAK+
Sbjct: 1040 EEGVVRLDGRSDILMMDMSSLAKI 1063
>gi|302847733|ref|XP_002955400.1| hypothetical protein VOLCADRAFT_106802 [Volvox carteri f.
nagariensis]
gi|300259242|gb|EFJ43471.1| hypothetical protein VOLCADRAFT_106802 [Volvox carteri f.
nagariensis]
Length = 2000
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 180/471 (38%), Positives = 270/471 (57%), Gaps = 33/471 (7%)
Query: 6 DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK-VMLVPIREMTDVLA 64
++G+ L+I S +ALDHL +IY+EA KE+HV +A +GLR +Y K LVP+ EM D +
Sbjct: 201 ERGAPLRILSAVALDHLPGFIYVEAAKESHVMDAIRGLRTVYVGKGAKLVPLNEMVDAVT 260
Query: 65 VESKAID-LSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE 123
V KA D ++RDTWVR++ G YK DLA+VVDVD V R T+KL+ R+D A+ N+ E E
Sbjct: 261 VNKKAKDDMARDTWVRVRGGLYKDDLARVVDVDPVAGRATIKLLHRLDFAAMVNRTE--E 318
Query: 124 VAKKKPF------VPPPRFMNVDEARELHIRVER--RRDPMTGDYFENIGGMLFKDGFLY 175
KK PF P P+ N +EAR + V+R +D M + F G+L
Sbjct: 319 QRKKNPFGRAPTVRPIPKVFNPEEARVAGLLVQRLPAQDGMPS---YQVLSHTFVGGYLL 375
Query: 176 KTVSMKSISAQNIQPTFDELEKFRTPGENGESD---------IASLSTLFANRKKGHFMK 226
+ V MK++ + P +E+ +F G+ D +A+L T + KG FMK
Sbjct: 376 RRVGMKTLIVLDTLPGLEEVARFNAGATTGDDDAPATDLSSLMATLPTDGTSAHKGTFMK 435
Query: 227 GDAVIVIK---GDLKNLKGWVEKV--DEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNH 281
GD GDL+NL V + D V P++KG + + EL K F G
Sbjct: 436 GDKARTGARGLGDLENLTARVTGLTADGAKVTAIPDIKGFAEEVEFEPDELTKVFSVGQR 495
Query: 282 VKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELR 341
V+V++G AG TGMV++VE+ + ++SDT +E+I+VFA D+ ES V GI +G+Y+L
Sbjct: 496 VRVLAGQYAGDTGMVVRVEEALCYLISDTNREEIKVFARDLTESEVVAAGIEMLGEYQLH 555
Query: 342 DLVLLDNNSFGVIIRVESEAFQVL--KGVPDRPEVALVKLREI--KCKLEKKSNVQDRNK 397
DLV ++ N+ GV++++E +A +VL G P++P+V L +L +I K ++K QD+
Sbjct: 556 DLVQINQNTAGVVVKIEKDAARVLTNNGTPEQPDVRLYRLTDIQRKVTFKQKPVTQDQAG 615
Query: 398 NTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSS 448
N + KD V I G K + G V +I+RG LF+H + E+ G++ +S S
Sbjct: 616 NPLREKDYVVIQSGRLKDRGGSVVYIWRGTLFLHCKEITENGGYVAVRSFS 666
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 173/447 (38%), Gaps = 154/447 (34%)
Query: 517 PYKGYRGRVVDVKGQSVRVELES--------QMKVVTVD---RSMISDNVVVSTPYRDTP 565
PY GYRGRV V++EL++ M+ VT+ +S + VV +
Sbjct: 798 PYNGYRGRVKQQTATHVQLELDAVAGRPVTVPMEYVTLGEAPKSGTAAAVVTAGYRAGAG 857
Query: 566 ------------RYGM-----------GSETPMHPSRTPLHPYMTPMRDAGATPIHDGMR 602
R+G G +TP H S TP HP MTP A TP H
Sbjct: 858 GYGAAAGRGGDGRWGADGQPPQTPAHPGMQTPAHYSMTPAHPSMTPAH-APYTPAH---- 912
Query: 603 TPMRDRAWNPYTP---MSPPRDN-WEDG----------NPGSWGT--SPQYQPGSP---- 642
PYTP S D W DG PG GT +PQ Q +P
Sbjct: 913 --------APYTPAHHTSGENDGYWGDGGSRHQPMTAPTPGYGGTAPTPQQQAMTPALTP 964
Query: 643 ----PSRAYEAPTPGS------GWAST-----------------------------PGGN 663
P A APTP G A T GG
Sbjct: 965 QGFTPQEAMHAPTPADLHLHPHGVAGTCLLGLENCAVGGVRGVGTVMTLAVVDEDGDGGT 1024
Query: 664 YSDAGTPRDSSSTYVNAPSPYLPS--TPGGQPM--------------TPNSASYLPG--- 704
+ A TP + + Y+ AP+P + + TPGG P TP + PG
Sbjct: 1025 PNLAPTPGLARTPYLAAPTPGVDAAPTPGGAPYDAGGYTPGTHAATGTPGLTAPTPGMPT 1084
Query: 705 ------TPGGQPMTPGT-GGLDAMSP-VIG-ADNEGPWFMPDILVRRSGEESVVGVIREV 755
TP G TPGT GGLD +P V+G ++ G W ILV+ S V+R
Sbjct: 1085 AYTPAFTPSGHIYTPGTPGGLDVGTPAVLGIMEDFGTWG--GILVQTPDGRSC--VVRTA 1140
Query: 756 LPDGSCRVVLG--SSGNGDTITA-LPNE------IEIVPPRKTDKIKIMGGPHR---GAT 803
PDG+ + G S G T+ A P E + +V P K DK+K++ + G T
Sbjct: 1141 QPDGTLSLQPGVYSPDAGFTLDAGAPRETHDARTLTVVRPSKRDKVKVIKAETQDVLGVT 1200
Query: 804 GKLIGVDGTDGIVKVDVSLDVKILDMA 830
G LIG+D DGIVK D+ +LD+A
Sbjct: 1201 GTLIGIDNADGIVKCDLC----VLDLA 1223
>gi|308476957|ref|XP_003100693.1| CRE-SPT-5 protein [Caenorhabditis remanei]
gi|308264505|gb|EFP08458.1| CRE-SPT-5 protein [Caenorhabditis remanei]
Length = 1210
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 287/1039 (27%), Positives = 452/1039 (43%), Gaps = 242/1039 (23%)
Query: 1 MQKCI---DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M+KC+ QI+SV+ + LK IYIEA K++HV A G + ++ +VPI+
Sbjct: 206 MRKCLAVEHTNEPFQIKSVVVKEGLKGMIYIEAFKQSHVMSAIDGFSALNQFQITMVPIK 265
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ---- 113
+M DVL V L ++VR+K YK DLA V VD + RV +KLIPR+D Q
Sbjct: 266 DMVDVLRVVKDIPQLKLGSYVRLKRTMYKDDLAVVDLVDIAQNRVNLKLIPRVDYQRRRG 325
Query: 114 ALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGF 173
A+ + K++P P+ + D +E+ + +T F G ++ GF
Sbjct: 326 AMRTDADKTYKLKRRPM---PKLFDQDAIKEVGGEI------VTDGDFIMFEGNHYRRGF 376
Query: 174 LYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVI 233
LYK + ++ A ++ T ELEKF+ E+ + L T + F+ GD V V
Sbjct: 377 LYKYFPINAVQADGVKATLGELEKFQ---ESSDDLKRELETTSMKDTENPFVPGDIVEVK 433
Query: 234 KGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
G+L NL+G V +D V + P+ + L + + +N+ EL KYF+ G+H KV+SG G T
Sbjct: 434 AGELVNLRGKVMAIDGTKVVMMPDQEDLKEAITLNASELRKYFKEGDHAKVISGRYEGQT 493
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNN-SFG 352
G++++V+ I+L+D E+++V D+ ++VTTG+ +G ++ DLV LD+ + G
Sbjct: 494 GLIVRVKDSTAIVLADLGMEELQVRVRDLQLCADVTTGVDSLGQFQFHDLVQLDHTGNVG 553
Query: 353 VIIRVESEAFQVLK--GVPDR--PEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRI 408
VIIR+E E +VL G+ +R P+ + K K + + V D N++ KD+V++
Sbjct: 554 VIIRLEKENLEVLNMHGIVNRIKPQAIIAK------KDVRFAKVLDSQNNSIEAKDLVKV 607
Query: 409 VEG-PCKGKQ------GPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR 461
+ G K ++ G V + +RG +FI+ R ++ G + + ++ G + N
Sbjct: 608 ISGLNIKERESDEDPVGEVLYAFRGTVFIYARKIAKNGGVMVCRPKQLLLQGAKKTN--- 664
Query: 462 NGDAYSRFNSLRTPPRIPQSPGRYSRGGPPA---GGRNRGGRGGHD-------------- 504
N SR S P SP S G P+ G +RG GG
Sbjct: 665 NTPMVSRMAS----PNPMASPRHSSGGMTPSSHDGMSSRGSTGGQTPRQNQPRHFGTANQ 720
Query: 505 -------ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS---MISDN 554
++G V++ GP KGY G V D +VRVEL +Q + V+VDR+ ++ D
Sbjct: 721 QKVRRDLTIIGKNVRITKGPMKGYFGIVRDATEDTVRVELHAQCRTVSVDRARMMVVGDT 780
Query: 555 VVVS------------TPYRD---TPRYG-----MGSETPMHPS-------RTPLHPYMT 587
+ S TP RD TP YG G++TPM+ + RTP + MT
Sbjct: 781 GITSSGSGTSFYNTAKTPMRDSSKTPMYGSKTPMYGAQTPMYGAMTPHAGDRTPHYGAMT 840
Query: 588 PMRDAGATPIH-DGMRTPM---------------------------RDRAWNPYTPMSPP 619
P G TP + DG RTP R A+ + +P
Sbjct: 841 PAYGGGRTPAYGDGSRTPAYGSKTPAYGDLDEHSSARTPAYGNDNGRTPAYGHDSGRTPA 900
Query: 620 RDNWEDGNPGSWGTS--------------------------PQYQPGSPPSRAYE----- 648
N E+G ++G S P Y G PS +
Sbjct: 901 YGNSENGRTPAYGASTDSGRTPAYDHDSGRTPGYESLPSRTPNYDSGKTPSYTNDFDTPT 960
Query: 649 ----------------APTPGSGWASTPGGNYSDAGTPR--------------DSSSTYV 678
A TP TPG D+G+P SS TY
Sbjct: 961 SPTYDPEPHEPYNNAPARTPAFDSGRTPGYETYDSGSPTYDPEPTGETEDIGDTSSPTYD 1020
Query: 679 NAPSPYLPSTPGG--QPMTPNSASYLPGTPGG--QPMTPGTGG----LDAMSPVIG---- 726
+ P Y TPG P TP +Y TPG PMTPGTGG A SP +G
Sbjct: 1021 SPPHSYSVPTPGAMINPATP--GAYHVDTPGPFVAPMTPGTGGAYDQYVAPSPYMGGGFE 1078
Query: 727 ADN-----------------EGPWFMPDILV-------RRSGEESVV-----GVIREVLP 757
A+N +G W M ++ V R + E++V G + +P
Sbjct: 1079 ANNFNNAGGAIESIPEHFLVQGHWIMSNLYVVIKEHDPRYNDREAIVQNANDGKVDIYIP 1138
Query: 758 DGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVK 817
D C + + +++ P+ D +++ G G +G+++ +DG D +++
Sbjct: 1139 DLKCNLEVDF-----------DQLSPTRPQPGDFARVIFGHDGGHSGQVVSMDGVDALIR 1187
Query: 818 VDVSL-DVKILDMAILAKL 835
+ D++ ++ + K+
Sbjct: 1188 SQSDISDMRSCNIGLCCKM 1206
>gi|320168343|gb|EFW45242.1| transcription factor Tat-CT1 [Capsaspora owczarzaki ATCC 30864]
Length = 1167
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 269/900 (29%), Positives = 418/900 (46%), Gaps = 127/900 (14%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLR--NIYSQKVMLVPIREMTDVLAVESK 68
L I SVIA +H++ +IY+EA K V++A KGL + K L+P ++M DVL+V
Sbjct: 278 LGIVSVIARNHIRGFIYVEAYKNLQVQDAIKGLSVLGMAYYKQQLIPHKDMPDVLSVVQA 337
Query: 69 AIDLSRDTWVRMK-IGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE----GRE 123
L WVR+K + YK DL VV ++ +K+IPR++LQ L + G +
Sbjct: 338 EAVLKVGAWVRLKKLALYKKDLGVVVSME--ADGAYIKIIPRVNLQELNDGTSENKGGFK 395
Query: 124 VAKKKPFVPPPRFMNVDE---ARELHIRVERRRDPMTG---------DYFENIGGMLFKD 171
+K P P ++ + A +L + M G N+ + +D
Sbjct: 396 TKAEKSKRPQPVLLDSTQRGSAPDLFELDDESDSQMFGPGVYRFTGSSSQNNMPEYVTED 455
Query: 172 GFLYKTVSMKSISAQNIQPTFDELEKFR-TPGENGESDIASLSTLFANRKKGHFMKGDAV 230
GF+YK SI N+ PT +EL++F TP E +SD ++ A R+ F+ GD V
Sbjct: 456 GFMYKFFKTDSIDLVNVNPTIEELKRFNATPDELRKSD-----SISAERR---FVVGDRV 507
Query: 231 IVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQA 290
V G+L+ L G V +D + + I P + L V + L K F G+H+KV++G
Sbjct: 508 EVTAGELQYLTGIVRNIDGDAIFILPTQADFKEELRVPASLLRKAFILGDHIKVIAGNHE 567
Query: 291 GATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNS 350
G TG+V +V+ ++ +SD T ++++VFA D ++EVT+G+ K+G +EL DLV LD +
Sbjct: 568 GETGLVTRVDDKIVTFVSDLTMKEMKVFAKDSQIATEVTSGLDKLGQFELYDLVQLDPQT 627
Query: 351 FGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIV 409
I ++E ++F+VL V ++ R I K K ++ D N++ D+V+I+
Sbjct: 628 VACITKIEKDSFKVLD---QNGSVQRIEPRAISQKRNSKFSMSLDGEHNSIQADDIVKIM 684
Query: 410 EGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRF 469
+G G+QG ++HIYR + F+H R +E++G + ++ + V G N + D + F
Sbjct: 685 DGAFTGRQGTIKHIYRSVAFVHCREVIENSGILVCRTRGLLSVSGKGTN-KKFMDPAAPF 743
Query: 470 NSLRTPPRIPQSPGRYSRG-------GPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYR 522
+ P P++ G P G G HD ++G +V +R GPYKG
Sbjct: 744 GASSFVPASPRNGVDRPVGNTGAPTPAPAGGLGRGRGARRHDEMIGKSVVIRSGPYKGLL 803
Query: 523 GRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYG-----MGSETPMHP 577
G V D RVEL ++ K V+VD++ + S P P G MG TP
Sbjct: 804 GIVKDATETVARVELHTKAKTVSVDKAQLR---YPSNPDGSDPMLGGRTPAMGGRTPAFG 860
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMR----TPMRDR--AWNP------------YTPMSPP 619
+TP + TP TP H GM TP AW+P Y
Sbjct: 861 GQTPSYGGQTP-SAGNMTPSHGGMSYGSMTPHSRNTGAWDPSVTNQSRSGNFGYDSHPSD 919
Query: 620 RDNWEDGNPGSWGT-------------SPQYQPGSPPSR--AYEAPTPGSGWASTPGGNY 664
RD ++D NPGS + +P G+P + APTP + +TPGG +
Sbjct: 920 RDRYQDYNPGSVNSYSQTPGMGSVGPQTPMNDIGTPAGTPGVFSAPTPSN--LATPGGYH 977
Query: 665 --SDAGTPRDSSSTYVNAPSPYLPSTPGGQPM-----------TPNSASYLPGTPGG-QP 710
S + TP ++NA +P PS G+ + TP SA TPG P
Sbjct: 978 IPSVSATP----GPHLNAYTPAPPSMHSGRALDAMTPAIHSAPTPMSAM----TPGAMNP 1029
Query: 711 MTPGTGGLDAMSPVIGADNE-------GPWFMPD--ILVRRSGEESVVG---VIREVLPD 758
MTP A++P+ A + G F+ D + + R + + G VI E +
Sbjct: 1030 MTPA-----ALNPMTPAPAQTPAPASIGSPFIRDAEVTISRPNDPRINGHTAVILEARSE 1084
Query: 759 GSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKV 818
S V L S N + + E++ V P + D + GP +G TG L+ + IV +
Sbjct: 1085 DSFLVNLLS--NNEEVLCSSGELQPVAPSRGDDVYFTQGPRQGQTGSLVSLAAGQAIVTI 1142
>gi|219122476|ref|XP_002181570.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406846|gb|EEC46784.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1057
Score = 288 bits (738), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 263/882 (29%), Positives = 399/882 (45%), Gaps = 103/882 (11%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M KC+ +G + I S IA K IY+E+ E V +A +G+R + + LVPI
Sbjct: 229 MNKCVAMARQGRPVGISSAIAA-QSKGKIYLESFSEPAVVDAIQGVRGLLQYTMRLVPIG 287
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
+MT V+ V S+ + ++ WVRM G+YK DLA V DV + V+ +PR+DL LA+
Sbjct: 288 DMTTVMTVTSRKKPVQKNEWVRMTRGHYKHDLALVKDVKESGLKCVVQCVPRLDL-TLAD 346
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGFLYK 176
++K PP +F N E L + R+R P Y + G + DG+L K
Sbjct: 347 LPPAEARMRRKTVRPPQKFFNPQEIAALGRHGLTRQRFPGLNLYCDYFDGNYYHDGYLLK 406
Query: 177 TVSMKSI---SAQNIQPTFDELEKF-RTPGENGESD--------------IASLSTLFAN 218
+++ S+ PT DEL++F R + E D + LS L
Sbjct: 407 EMTVGSMIKACTDEDPPTLDELQRFQRRQSKQNEEDGGDENEGSKMAASLLDELSDLQGR 466
Query: 219 RKKGHFMK--------GDAVIVIKGDLKNLKGWVEKVDEENVHIRP-----EMKGLPKTL 265
G GD + VI+GDL ++G + +D V ++P ++ G + +
Sbjct: 467 TGLGKTKTGGGGGLLIGDTIEVIEGDLIGMRGKLVSLDGTTVKVKPINANVDLGGTDE-I 525
Query: 266 AVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQ------HVLIILSDTTKEDIRVFA 319
+L KY G HVKV G A TG+V+ VEQ ++L+D T ++I V
Sbjct: 526 EFLGNQLRKYIPVGAHVKVTDGRYANETGVVVAVEQLDGETDFTAVVLTDVTNKEISVRT 585
Query: 320 DDVVESSEVTTGITKIGDYELRDLVLLDN----NSFGVIIRVESEAFQVLKGVPDRPEVA 375
+ ES+EV +G K+ YEL DLV+L N GVI+RV E F V+ E+
Sbjct: 586 SQLRESAEVASGQDKLQGYELYDLVVLSGGGSANEVGVIVRVGREDFTVINNHGIVREIR 645
Query: 376 LVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHH 435
+LR + +++ D N + D V +VEGP KGK ++ + R LF+H +
Sbjct: 646 PEELRGKRNSTSQRAVALDVQGNQIRASDSVNVVEGPHKGKTATIKRMSRAQLFLHSQTR 705
Query: 436 LEHAGFICAKSSSCVVVGG-SRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGG 494
+HAG +S SCV+ G ++A G S F + PQS SRGGP G
Sbjct: 706 TDHAGIFVVRSRSCVLAGTRTQARGATPDSGVSPFAT-------PQS---QSRGGPQPG- 754
Query: 495 RNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDN 554
RG R D L+G TV+++ G +KGY G V D V+VEL S++K V V R ++
Sbjct: 755 --RGKR--DDGLIGKTVRIQAGQWKGYLGTVADATATHVQVELHSRLKKVMVVRERVAVA 810
Query: 555 VVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDG-MRTPMRDRAWNPY 613
++ R + P+ P+ + TPM GATP+H G + D W P
Sbjct: 811 GDKFGATQEQNRMVDVNPNPIAPTTPFVAAGQTPMH-GGATPMHGGALDGDTSDEVWQPG 869
Query: 614 TPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDS 673
+ +DG WG++ GSP GW ST P
Sbjct: 870 GAVDQDAVKDDDG----WGSTANDGFGSPKD------GDSDGWGSTSDQPKGWGTYP--- 916
Query: 674 SSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPW 733
+ N +PST G + + + TPG W
Sbjct: 917 -AVKDNTVKKEVPSTNGNGVKREQAKREMEAELDTEE-TPG------------------W 956
Query: 734 FMPDILVRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIK 793
+M + V+ ++ GVI+E+ P VV +T+ A +E+ +VPP + D +
Sbjct: 957 YMERVCVQNKSKDKQ-GVIKEIDPATKAAVVEYEDQTFETLRA--SELAMVPPSEHDTVL 1013
Query: 794 IMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
+ GG G G L+ VDG+D I+K D + + KI++++ LAK+
Sbjct: 1014 VTGGNEIGLEGSLVCVDGSDAILK-DANDEFKIVEISFLAKV 1054
>gi|268536628|ref|XP_002633449.1| C. briggsae CBR-SPT-5 protein [Caenorhabditis briggsae]
Length = 1214
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 253/832 (30%), Positives = 391/832 (46%), Gaps = 139/832 (16%)
Query: 1 MQKCI---DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M+KC+ + QI+SV+ + L+ IYIEA K++HV A +G + + +VPI+
Sbjct: 207 MRKCLAVENSNEPFQIKSVVVKEGLRGMIYIEAFKQSHVMSAIEGFSALNQFNITMVPIK 266
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ---- 113
+M DVL V L ++VR+K YK DLA V VD + RV +KLIPR+D Q
Sbjct: 267 DMVDVLRVVKDIPQLKLGSYVRLKRTMYKDDLAVVDLVDIAQNRVNLKLIPRVDYQRRRG 326
Query: 114 ALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGF 173
A+ + + K++P P+ + D +E+ + +T F G ++ GF
Sbjct: 327 AMRTEADKTYKLKRRPM---PKLFDQDAIKEVGGEI------VTDGDFIMFEGNHYRRGF 377
Query: 174 LYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVI 233
LYK + ++ A ++PT ELEKF+ E+ + L T + F+ GD V V
Sbjct: 378 LYKYFPINAVQADGVKPTLAELEKFQ---ESSDDLKRELETTSLKDTENPFVPGDIVEVK 434
Query: 234 KGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
G+L NL+G V VD V + P+ + L + + +N+ EL KYF+ G+H KV+SG G T
Sbjct: 435 AGELVNLRGKVMTVDGTKVVMMPDQEDLKEAITLNASELRKYFKEGDHAKVISGRYEGQT 494
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNN-SFG 352
G++++V+ I+L+D E+++V D+ ++VTTG+ +G ++ RDLV LD+ + G
Sbjct: 495 GLIVRVKDSTAIVLADLGMEELKVRVRDLQLCADVTTGVDSLGQFQYRDLVQLDHTGTVG 554
Query: 353 VIIRVESEAFQVLK--GVPDR--PEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRI 408
VIIR+E E +VL G +R P+ A++ ++++ + V D N+V KD+VR+
Sbjct: 555 VIIRLEKEHLEVLNMHGTVNRIKPQ-AIISKKDVRF-----AKVLDSQNNSVEAKDIVRV 608
Query: 409 VEGPCKGKQ-------GPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR 461
+ G + G V + +RG +FI+ R ++ G + K ++ G + +
Sbjct: 609 ISGVNYKENESDDDPVGEVLYAFRGTVFIYARKIAKNGGVLVCKPKQLLLQGAKKTS--- 665
Query: 462 NGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRN----RGGRGGHD------------- 504
N +R S P + R+S GG G ++ RG GG
Sbjct: 666 NAPMVARMASPN-----PMASPRHSAGGMTPGSQDGMSSRGSVGGQTPRQNQNRHFGTAN 720
Query: 505 --------ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI----- 551
++G V++ GP KG G V D +VRVEL +Q + ++VDR+ +
Sbjct: 721 QQKVRRDLTIIGKNVRITKGPMKGLFGIVRDATEDTVRVELHTQCRTISVDRARVMVVGD 780
Query: 552 ----------SDNVVVSTPYRDTPRYGM-GSETPMHPSRTPLHPYMTPMRDAGATPIH-D 599
S TP RD+ + M GS+TPM+ ++TP++ MTP D G TP + D
Sbjct: 781 TGITHTSGGSSFYNTAKTPMRDSSKTPMYGSKTPMYGAQTPMY-VMTPAYDGGRTPAYGD 839
Query: 600 GMRTPMRDRAWNPYTPMSPPRDNW----------EDGNPGSWGT----SPQYQPGSPPSR 645
G RTP A+ TP D E G ++G +P Y S +
Sbjct: 840 GGRTP----AYGSKTPAYGDHDEHSSSRTPAYGNESGRTPAYGNESGRTPAYGSDSSRTL 895
Query: 646 AY---------------EAPTPGSGWASTPGGNYSDAG-TP---RDSSSTYVNAPSPYLP 686
AY + P GS + TP D+G TP +DSSS PS
Sbjct: 896 AYGKETGRTPAYGNESSKTPAYGSDSSRTPAYGSVDSGRTPAYDQDSSSHSSKTPSYDSS 955
Query: 687 STP--GGQPMTPNSASYLPG-----------TPGGQP-MTPGTGGLDAMSPV 724
TP G TP S +Y P TPG TPG D+ SP
Sbjct: 956 KTPAYGNDYETPMSPTYEPEPADTYNNAPARTPGFDSGRTPGYETYDSGSPT 1007
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 127/317 (40%), Gaps = 89/317 (28%)
Query: 564 TPRYG-MGSETPMH---PSRTPLHPYMTPMRDAGATPIHD------GMRTPMRDRAWNPY 613
TP YG S+TP + SRTP + + D+G TP +D +TP D + P
Sbjct: 904 TPAYGNESSKTPAYGSDSSRTPAYGSV----DSGRTPAYDQDSSSHSSKTPSYDSSKTPA 959
Query: 614 ------TPMSP-----PRDNWEDG---NPG-SWGTSPQYQPGSPPSRAYEAPTPGSGWAS 658
TPMSP P D + + PG G +P Y+ S Y+ P P +G
Sbjct: 960 YGNDYETPMSPTYEPEPADTYNNAPARTPGFDSGRTPGYETYDSGSPTYD-PEPAAGAED 1018
Query: 659 TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGG--QPMTPNSASYLPGTPGG--QPMTPG 714
G D +PR Y + P Y TPG P TP +Y TPG PMTPG
Sbjct: 1019 DIG----DTSSPR-----YDSPPLSYSAPTPGAMINPATP--GAYHVNTPGPFVAPMTPG 1067
Query: 715 TGG----LDAMSPVIGAD-------------------NEGPWFMPDILVRRSGEESVVGV 751
+GG A SP +G ++G W M ++ V
Sbjct: 1068 SGGGYDQYVAPSPYMGGGYDTNNYSSAGEEKIPDHFLSQGHWVMANLYV----------T 1117
Query: 752 IREVLPDGSCR-VVLGSSGNGDTITALP----------NEIEIVPPRKTDKIKIMGGPHR 800
I+E P + R ++ + NG +P ++I+ P D +++ G
Sbjct: 1118 IKEHDPRYNDREAIVQNVENGRVEIYVPDLKINLEVEFDQIQPTKPAAGDYARVIFGEDG 1177
Query: 801 GATGKLIGVDGTDGIVK 817
G +G+++ +G D +++
Sbjct: 1178 GHSGQVVSKEGCDALIR 1194
>gi|403414129|emb|CCM00829.1| predicted protein [Fibroporia radiculosa]
Length = 1116
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 245/786 (31%), Positives = 379/786 (48%), Gaps = 123/786 (15%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K ID LQI S D L IY+EA V +AC GL IY S+ ++LVPI
Sbjct: 192 MRKAIDLEYSNRPLQIVSAFQRDSLPGMIYVEARSAKQVSDACNGLVGIYPSRGIILVPI 251
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA 116
EM +L ++ + + ++ +WVR++ G Y+GD+A+V+D+ + V +K IPRIDL
Sbjct: 252 EEMASLLQIKKQDLTVTPGSWVRIRRGKYQGDIAQVMDITENGEEVGLKFIPRIDLNPKD 311
Query: 117 N---KLEGREVAKKKP-------FVPPPRFMNVDEARELHIR--VERRRDPMTGDYFENI 164
+ ++ G++ KK P PP RF N +E +++ R V +R F+N
Sbjct: 312 DGSVEIMGKK-RKKGPTGISSSSMRPPQRFFNYEEVVKVYGRKAVSKRNQVYV---FQN- 366
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIAS--LSTLFANRKKG 222
+KDGF+ K + + N+ PT DE+ +F T G++G + A+ LS + +K
Sbjct: 367 --ETYKDGFIEKDFKLAGLQLDNVNPTLDEITRF-THGQDGAENDANVDLSIIAEASRKA 423
Query: 223 H---FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP---EMKGLPKTLAVNSKELCKYF 276
GD V V +G+ + G V ++++ V I+P + G + + + ++ + K F
Sbjct: 424 AISVLQPGDHVEVFEGEQSGVHGTVHSIEQDIVSIQPVGVDFDG--QRIQLPARSVRKRF 481
Query: 277 EPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIG 336
+PG+HVKV++G A TG+V+ V +V+ LSD + +++ VF+ D+ E++EV TG +G
Sbjct: 482 KPGDHVKVMTGQNADETGLVVSVSANVVTFLSDMSMQEVSVFSKDLREAAEVGTGTNVVG 541
Query: 337 DYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DR 395
+YEL DLV LD + GVI + E ++F+VL +V LV+ +I + + + D
Sbjct: 542 NYELHDLVQLDMQTVGVIFKTERDSFRVLD---QNGQVRLVQPHQISMRRDSNRAIATDA 598
Query: 396 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGG 454
+ + V D V+ V+G +G++G V H ++ F+H+R + EH G ++ S V V
Sbjct: 599 EGHELRVNDNVKEVDG--EGRKGRVLHTHQSFFAFLHNRDYNEHGGVFVTRARSLVSV-A 655
Query: 455 SRANGDRNGDA-YSRFNSLRTPPRIPQSPGRYSRGGPPAG--GRNRGGRGGHDALVGTTV 511
+ N + G A S+ N + GG G G GRG D L+G V
Sbjct: 656 PKGNIMKLGAADLSKMNPALS-------------GGAMGGMVGSGNIGRGPRDRLIGVPV 702
Query: 512 KVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS------------DNVVVS- 558
V GP KGY G + D G RVEL + KV+++D+ + +N +
Sbjct: 703 TVVKGPSKGYIGTIKDTNGAIARVELNTGNKVISIDKMKLMWRKPPTGVLEPLENAIAGR 762
Query: 559 -----------TPYRDTPRYGM--GSETP-------MHPSRTPLHPYM----TPMRDAGA 594
PY + +G G++TP +RTP +PY TP +A +
Sbjct: 763 PSQGGGSTRTPNPYNNRSSFGQRTGAQTPWDNRTPAWETNRTP-NPYAAAGKTPAWNAAS 821
Query: 595 ---TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPT 651
P DG RTP AWN + P N GN P P A+ T
Sbjct: 822 RTPNPYADGGRTP----AWNSASRTPNPYTN---GNA---------SPARPAGGAWGGAT 865
Query: 652 PG-SGWASTPGGNYSDAGTPRDSSSTYVNAPS-PYLPSTPGGQPMTPNSASYLPGTPGGQ 709
PG SGW + +P S + APS P+L T G+P P SA TPG
Sbjct: 866 PGRSGWGGAASPRQTGWASPARPSGAWAEAPSGPWLLKTVQGEP--PLSAP----TPGFA 919
Query: 710 PMTPGT 715
P TPG
Sbjct: 920 PYTPGA 925
>gi|17542068|ref|NP_502283.1| Protein SPT-5 [Caenorhabditis elegans]
gi|74965276|sp|Q21338.3|SPT5H_CAEEL RecName: Full=Transcription elongation factor SPT5; AltName:
Full=DRB sensitivity-inducing factor large subunit;
Short=DSIF large subunit
gi|3878373|emb|CAA92685.1| Protein SPT-5 [Caenorhabditis elegans]
Length = 1208
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 240/776 (30%), Positives = 375/776 (48%), Gaps = 106/776 (13%)
Query: 1 MQKCI---DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M+KC+ QI+SV+ + LK IYIEA K++HV A +G + + +VPI+
Sbjct: 203 MRKCLAVEHTNEPFQIKSVVVKEGLKGMIYIEAFKQSHVMSAIEGFSALNQFTITMVPIK 262
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ---- 113
+M DVL V L ++VR+K YK DLA V VD + RV +KLIPR+D Q
Sbjct: 263 DMVDVLRVVKDIPQLKLGSYVRLKRTMYKDDLAVVDLVDIAQNRVNLKLIPRVDYQKRRG 322
Query: 114 ALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGF 173
A+ + K++P P+ + D +E+ + +T F G F+ GF
Sbjct: 323 AMRTDADKNYKLKRRPM---PKLFDQDTIKEVGGEI------VTDGDFLVFEGNHFRRGF 373
Query: 174 LYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVI 233
LYK + +I A ++PT ELEKF+ E+ + L T + F+ GD V V
Sbjct: 374 LYKYFPINAIQADGVKPTLGELEKFQ---ESSDDLKRELETASLKDTENPFVPGDIVEVK 430
Query: 234 KGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
G+L NL+G V VD V + P+ + L + + +N+ EL KYF+ G+H KV+SG G T
Sbjct: 431 AGELVNLRGKVMTVDGTKVVMMPDQEDLKEAITLNAHELRKYFKEGDHAKVISGRYEGHT 490
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNN-SFG 352
G++++V+ I+LSD E+++V D+ ++VTTG+ +G ++ DLV LD+ + G
Sbjct: 491 GLIVRVKDSTAIVLSDLGMEELKVRVRDLQLCADVTTGVDSLGQFQYHDLVQLDHTGNVG 550
Query: 353 VIIRVESEAFQVLK--GVPDR--PEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRI 408
VI+R+E E +VL GV +R P+ A++ ++++ + V D N++ KD+V++
Sbjct: 551 VIVRLEKEHLEVLNMHGVVNRIKPQ-AIIAKKDVRF-----AKVLDSQNNSIEAKDLVKV 604
Query: 409 VEGPCKGKQ-------GPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRAN--- 458
+ GP ++ G V + +RG +F++ R ++ G + K ++ G +
Sbjct: 605 IGGPNAKERETDEDPVGEVLYAFRGTVFVYSRKVTKNGGVLVCKPKQLILQGAKKTTSTP 664
Query: 459 -----GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGR--------------NRGG 499
N A R +S PR PQ R N+
Sbjct: 665 MVSRMASPNPMASPRHSSGGMTPRSPQDGMSSRGSSGGQTPRQGGGGGRGGHFGTANQQK 724
Query: 500 RGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS---MISDNVV 556
L+G V++ GP KG+ G V D +VRVEL +Q + ++VDR+ ++ D +
Sbjct: 725 VRRDLTLIGKNVRIIKGPMKGHFGIVRDATEDTVRVELHTQCRTISVDRARVMVVGDTGI 784
Query: 557 VS-------------TPYRD---TPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIH-D 599
+ TP RD TP Y GS+TPM+ ++TP++ MTP D G TP + +
Sbjct: 785 TAGSGGGSSFYSSSKTPMRDSGKTPMY--GSKTPMYGAQTPMYGSMTPAYDGGRTPAYGE 842
Query: 600 GMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAY----EAPTPGSG 655
G RTP A+ TP + D + S +P Y S + AY A TP G
Sbjct: 843 GGRTP----AYGSKTPA------YGDLDEHSSSRTPAYGNDSSRTPAYGSADGARTPAYG 892
Query: 656 WASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPM---TPN--SASYLPGTP 706
ST GG G+ +S + + TPG + M TPN S+S P P
Sbjct: 893 --STEGGRTPAYGSMDNSRTPAYDDSG----RTPGYESMPSRTPNYDSSSKTPAYP 942
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 147/343 (42%), Gaps = 86/343 (25%)
Query: 564 TPRYGM--GSETPMHPS----RTPLHPYMTPMR-----DAGATPIHDGM--RTPMRDRAW 610
TP YG G+ TP + S RTP + M R D+G TP ++ M RTP D +
Sbjct: 877 TPAYGSADGARTPAYGSTEGGRTPAYGSMDNSRTPAYDDSGRTPGYESMPSRTPNYDSSS 936
Query: 611 NPYTPMSPPRDNWED----GNPGSWGTSPQYQPGSP------PSR--AYEAPTPGSGWAS 658
TP P ++ N SP Y+P +P P+R A+ + TPG
Sbjct: 937 K--TPAYPESEHSARTPAYNNDYDIPLSPAYEPDAPEAYDNAPARTPAFVSRTPGYDTYE 994
Query: 659 TPGGNYS-DAGTPRD------SSSTYVNAPSPYLPSTPGG--QPMTPNSASYLPGTPG-G 708
Y DA T + SS TY + P Y+ TPG P TP +Y TPG
Sbjct: 995 NSSPTYEPDAATKVEEDIGDTSSPTYDSPPHSYVVPTPGAMLNPATP--GAYHVDTPGFA 1052
Query: 709 QPMTPGTGG----LDAMSPVIGADN-------------------EGPWFMPDILV----- 740
PMTPG+GG A SP G D+ +G W + ++ V
Sbjct: 1053 APMTPGSGGAYDQYVAPSPFAGYDSNNYNNADGAIEQIPDHFLAQGVWIVQNLCVQIKDH 1112
Query: 741 --RRSGEESVV-----GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIK 793
R +G E+++ G + +PD C + + + D +T + P+ D +
Sbjct: 1113 EGRFNGREAIIKDVTDGKVDVYMPDHKCNLEV----DFDQLTPM-------KPQPGDDAR 1161
Query: 794 IMGGPHRGATGKLIGVDGTDGIVKVDVSL-DVKILDMAILAKL 835
++ G G +G+L+ +DG + +++ + D++++++ + K+
Sbjct: 1162 VIFGQDAGHSGQLVSMDGFEAVIRSQEDMSDMRVINIGLCCKM 1204
>gi|341893356|gb|EGT49291.1| hypothetical protein CAEBREN_26281 [Caenorhabditis brenneri]
Length = 1148
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 259/899 (28%), Positives = 402/899 (44%), Gaps = 185/899 (20%)
Query: 1 MQKCI---DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M+KC+ QI+SV+ + LK IYIEA K++HV A +G + + +VPI+
Sbjct: 208 MRKCLAVEHTNEPFQIKSVVVKEGLKGMIYIEAFKQSHVMSAIEGFSALNQFTITMVPIK 267
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ---- 113
+M DVL V L ++VR+K +K DLA V VD + RV +KLIPR+D Q
Sbjct: 268 DMVDVLRVVKDIPQLKLGSYVRLKRTMFKDDLAVVDLVDIAQNRVNLKLIPRVDYQRRRG 327
Query: 114 ALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGF 173
A+ + + K++P P+ + D +E+ + +T F G ++ GF
Sbjct: 328 AMRTEADKTYKLKRRPM---PKLFDQDAIKEVGGEI------VTDGDFIMFEGNHYRRGF 378
Query: 174 LYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVI 233
LYK + ++ A ++PT ELEKF+ E+ + L T + F+ GD V V
Sbjct: 379 LYKYFPINAVQADGVKPTLGELEKFQ---ESSDDLKRELETTSLKDTENPFVPGDIVEVK 435
Query: 234 KGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
G+L NL+G V VD V + PE + L + + +N+ EL K+F+ G+H KV++G G T
Sbjct: 436 SGELVNLRGKVMTVDGTKVVMMPEQEDLKEAITLNASELRKHFKEGDHAKVIAGRYEGQT 495
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNN-SFG 352
G++++V+ + I+L+D E+++V D+ ++VTTG+ +G ++ DLV LD + G
Sbjct: 496 GLIVRVKDNTAIVLADLGMEELKVRVRDLQLCADVTTGVDSLGQFQYHDLVQLDTTGTVG 555
Query: 353 VIIRVESEAFQVLK--GVPDR--PEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRI 408
VIIR+E E +VL GV +R P+ A++ ++++ + V D N+V KD+V+I
Sbjct: 556 VIIRLEKEHLEVLNMHGVVNRIKPQ-AIIGKKDVRF-----AKVLDSQNNSVEAKDLVKI 609
Query: 409 VEGPCKGKQ-------GPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR 461
+ GP ++ G V + +R +F++ R +++G + K ++ G + +
Sbjct: 610 IGGPNTKERESDEDPVGEVLYAFRQTVFVYARKIAKNSGVLVCKPKQLLLQGAKKTANNP 669
Query: 462 NGDAYSRFNSLRTPPRIP--QSPGR---YSRGG----------PPAGGRNRGGRGGHD-- 504
+ N + +P P +PG SRG P R+ G
Sbjct: 670 MITRMASPNPMASPRHNPGGMTPGSDSMSSRGSVGSQTPRQNQQPHNQRHFGTANQQKVR 729
Query: 505 ---ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS---MISDNVVVS 558
++G V++ GP KG G V D +VRVEL +Q + ++VDR+ ++ D + +
Sbjct: 730 RDLTIIGKNVRITKGPMKGLFGIVRDATEDTVRVELHTQCRTISVDRARVMVVGDTGITT 789
Query: 559 ------------TPYRD---TPRYG-----MGSETPMHPS-------RTPLHPYMTPMRD 591
TP RD TP YG G++TPM+ + RTP + MTP D
Sbjct: 790 SSGGSSFYSSSKTPMRDSSKTPMYGAKTPMYGAQTPMYGAMTPHAGDRTPHYGSMTPAYD 849
Query: 592 AGATPI--------------------------------HDGMRTPMRDRAWNPYTPMSPP 619
G TP HD RTP + + TP
Sbjct: 850 GGRTPAYGDGGRTPAYGSKTPAYGDIDEHSSARTPAYGHDSGRTPAYGSSDSGRTPSYGS 909
Query: 620 RDNWED---GNPGSWGTSPQYQ------PG------------------------SPPSRA 646
D+ G+ G +P Y+ PG +P S A
Sbjct: 910 TDSGRTPAYGSSSDSGRTPAYENDPGRTPGYDNVPSRTPTYDSSKTPSYNTDFETPMSPA 969
Query: 647 YE-----------APTPGSGWASTPGGNYSDAGTPR------------DSSSTYVNAPSP 683
YE A TP TPG D+G+P SS TY + P
Sbjct: 970 YEPESSDTYNRAPARTPAFDSGRTPGYETYDSGSPTYEPTSATEDIGDTSSPTYDSPPHS 1029
Query: 684 YLPSTPGG--QPMTPNSASYLPGTPGG--QPMTPGTGG----LDAMSPVIGADNEGPWF 734
Y TPG P TP +Y TPG PMTPGTG A SP +G+ + F
Sbjct: 1030 YAAPTPGAMINPATP--GAYHIDTPGPFVAPMTPGTGSAYDQYVAPSPYMGSQFDSNSF 1086
>gi|290982037|ref|XP_002673737.1| predicted protein [Naegleria gruberi]
gi|284087323|gb|EFC40993.1| predicted protein [Naegleria gruberi]
Length = 963
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 242/793 (30%), Positives = 376/793 (47%), Gaps = 129/793 (16%)
Query: 6 DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRN-IYSQKVMLVPIREMTDVLA 64
+K L I S + ++ K IYIEA KE HV+ A +GL + IY + LVP++EM DVL
Sbjct: 153 NKKDRLLITSALFIEGFKGKIYIEAQKEVHVRHAIEGLSHLIYESGIKLVPLKEMPDVLN 212
Query: 65 VE---SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEG 121
V +K D+S WVR+K G YKGD+ KV DVD R V L+PRID G
Sbjct: 213 VNQLSTKIQDISVGKWVRVKRGTYKGDIGKVHDVDKARGYCVVVLVPRIDY-------TG 265
Query: 122 REVAKKKPFVPPPRFMNVDEAREL-HIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
+ K+ PP R N + + +VE +D +T ++ G F DG++YK + +
Sbjct: 266 QSSGKR----PPQRLFNKELLPQTEQEKVEDAKDQITYSVYQ---GNKFHDGYVYKHIHL 318
Query: 181 KSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 240
KS+ ++I PT EL+ + S ST + +K +F +GD V VIKG+L+ +
Sbjct: 319 KSLETKDIIPTNSELQIYY--------QNESPSTAISLSRKTYFKRGDNVRVIKGELRGM 370
Query: 241 KGWVEKVDEEN--VHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVV-SGTQAGATGMVL 297
G + +DEE+ + + P+ + L S +L K+F G +VV +G G +G ++
Sbjct: 371 VGQITNIDEESQVITMLPKSNDINTPLQFTSNQLQKHFSVGQFCRVVGTGKWEGESGYIV 430
Query: 298 KVEQH--VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
+V + +++ ++ + D+ V+++++ E++ V + K+G+Y L D+V LD+ + GVI+
Sbjct: 431 RVSEDDDSIVLYNEVRRCDMNVYSNEIQETTTVASE-NKLGNYSLFDMVRLDSQTMGVIV 489
Query: 356 RVESE---AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ--DRNKNTVAVKDVVRIVE 410
+ +S + ++ V + + VKL+E+ K K+ + D++K+ V + D V++++
Sbjct: 490 KFDSNKNTSDAQVQVVDNNDVLRQVKLQELGRKQNTKAGYKAPDKSKHLVGISDTVKVID 549
Query: 411 GPCK---GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYS 467
P G++G V+ ++R LF +++AG +S C + G RN
Sbjct: 550 -PTSVHFGREGVVKQVFRKFLFCCSIDLIQNAGIFAVPASHCELRGA------RNRQI-- 600
Query: 468 RFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGG-------HDALVGTTVKVRLGPYKG 520
NS Q+ G A G RG + T + GPYKG
Sbjct: 601 -LNS--------QTSG--------AAGNTTNKRGFVFTKRRRNHPFTNKTAIITKGPYKG 643
Query: 521 YRGRVVDVKGQSVRVELESQMKVVTVDRSMIS----------DNVVVSTPYRDTPRYGMG 570
Y G V D + R+EL SQ K++ VD S IS VSTPY ++ G
Sbjct: 644 YLGIVKDATDTTARIELHSQNKIINVDISWISLQDEKEKRKDTYQTVSTPYHNS-----G 698
Query: 571 SETPMHPSRTPLHPYMTPMRDAGATPIHDGM---------RTPMRD-RAWNPYTPMSPPR 620
+ TP P TP RD+ TPIH + TP R AWNP P +P
Sbjct: 699 AATPFMPPSTPWD-----NRDSSKTPIHTSLGHETPIHRPETPSRSGDAWNPRKPNTPMH 753
Query: 621 DNWEDGNPGSWGTSPQ-----YQPG---SPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
D E PG ++P PG +P + AY TPG G TPG + TP
Sbjct: 754 DWQETTTPGGVPSTPHDNYTVNTPGIGMNPITPAY---TPGVGAPITPG--ITTPNTPHG 808
Query: 673 SSSTYVNAPSPYLPSTPGGQ---PMTPNSASYLPGTPGGQPMTPG---TGGLDAMSPVIG 726
+S Y P TPG Q P+TP+ + TPGG TP G ++P +G
Sbjct: 809 DNS------YSYHPITPGIQTPNPVTPHESYNSISTPGGVFQTPNPDMYGYGSVVTPGMG 862
Query: 727 ADNEGPWFMPDIL 739
P+ P ++
Sbjct: 863 HSVSTPYGTPGMM 875
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 77/184 (41%), Gaps = 18/184 (9%)
Query: 553 DNVVVSTP----YRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGAT--PIHDGMRTPMR 606
DN V+TP TP Y G P+ P T + TP D + PI G++TP
Sbjct: 770 DNYTVNTPGIGMNPITPAYTPGVGAPITPGITTPN---TPHGDNSYSYHPITPGIQTPNP 826
Query: 607 DRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSD 666
Y +S P ++ NP +G PG S + TPG T G
Sbjct: 827 VTPHESYNSISTPGGVFQTPNPDMYGYGSVVTPGMGHSVSTPYGTPGMMHHPTTPGMMHH 886
Query: 667 AGTPRDSSSTYVNAPSPYL--PSTPGGQPMTPNSASYLPGTPGGQPMTPG-----TGGLD 719
TP ++ +P L P+TPG PMTP + P TPG PMTPG T G+
Sbjct: 887 PTTPGFIGYPGMHPMTPGLMNPTTPGMHPMTPGMMN--PTTPGMHPMTPGMMHPSTPGMH 944
Query: 720 AMSP 723
M+P
Sbjct: 945 PMTP 948
>gi|193606001|ref|XP_001947840.1| PREDICTED: transcription elongation factor SPT5-like [Acyrthosiphon
pisum]
Length = 919
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 227/732 (31%), Positives = 351/732 (47%), Gaps = 82/732 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
L+I+S+++ + +K YIY+E+ K+ HVK A + + ++ K +VPI+EMTDVL V
Sbjct: 213 LKIKSIVSPEGVKGYIYVESYKQTHVKSAIENVSSLKYGFWKQQMVPIKEMTDVLKVVKV 272
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL------EGR 122
L WVR+K G YK D+A++ VD + +V +KL+PRID L L E
Sbjct: 273 QTSLKSKQWVRLKKGLYKDDIAQIDYVDLAQNQVHLKLLPRIDYTRLRGALRVSIDPEAL 332
Query: 123 EVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKS 182
+ KK+ P + +A I E D GD+ G GFLYK + +
Sbjct: 333 KRKKKRRVSAKPFDLEAIKA----IGGEVTSD---GDFLIFEGNRYSHKGFLYKNFYINA 385
Query: 183 ISAQNIQPTFDELEKFRT--PGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNL 240
I + ++PT ELEKF G + E +++ TL AN + GD V V G+L NL
Sbjct: 386 IMTEGVKPTLLELEKFEDVPEGLDIELTLSNKDTL-ANSQI--LCSGDNVEVCAGELMNL 442
Query: 241 KGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
+G V D + V I P+ + L L EL KYF+ G+HVKVV G G TG++++VE
Sbjct: 443 QGKVLSTDGDTVLIMPKHENLNTPLEFMFNELRKYFKQGDHVKVVGGRYEGDTGLIVRVE 502
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
Q+ +++ SD T ++ V D+ ++ +G+ +G ++ DLV +D + GVI+R+E E
Sbjct: 503 QNRVVLFSDVTMHELEVLPRDLQLCTDTASGVDSLGQFQWGDLVQIDPQNVGVIVRIERE 562
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGP 419
Q+L E K + + K E ++ + D +++ ++V++++GP G G
Sbjct: 563 KMQILNMAGKLVE---AKPQSLNKKKEHRNTIGIDGLGSSIQRNEIVKVIDGPHTGLHGV 619
Query: 420 VEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR--NGDAYSRFNSLRTPPR 477
++H+YR F++ R ++ G + + G S+ + D +S S+
Sbjct: 620 IKHLYRHFAFLYSRLMTDNGGIFVCRLRHIALAGNSKNRQTKITTQDGFSSPQSM----- 674
Query: 478 IPQSPGRYSRG--GPPAGGRNRGGRGGHD-------ALVGTTVKVRLGPYKGYRGRVVDV 528
SP R + G G G G GG L+G T+++ +GPYKG G V D
Sbjct: 675 ---SPWRSTFGQLGVGIGKETFVGTGGRFGGVQRDIGLIGQTIRIIVGPYKGDVGIVKDA 731
Query: 529 KGQSVRVELESQMKVVTVDRSMIS-------DNVVVSTPYR------DTPRYGMGSETPM 575
+ RVEL S + ++VDR I+ D + S+ R TP Y GS P+
Sbjct: 732 TECTARVELHSSCQTISVDRRNITIVLQKTKDGRLTSSYSRTPVNALTTPGYREGSLPPV 791
Query: 576 HPSRTPLHPYMTPMRDAGA-TPIHDGMRTPMRDRAWNPYTPMSPPRDNWED-----GNPG 629
S TP + + G+ TP HDG +TP AW+P + + R ED G+
Sbjct: 792 QGSITPNYEVGNRTPNFGSTTPSHDGSKTPT--HAWDPASGYTFTRVTDEDLEYPLGSDT 849
Query: 630 SWGTSPQYQPGSP--PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPS 687
S+G SP GS Y+ TP SG ST S+Y+N PSP
Sbjct: 850 SFGQSPSTLYGSSVHSYSPYQELTP-SGCNST---------------SSYINTPSPIDTD 893
Query: 688 TPGGQPMTPNSA 699
+P P S+
Sbjct: 894 SPRSLQFYPASS 905
>gi|223996747|ref|XP_002288047.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977163|gb|EED95490.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1158
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 254/899 (28%), Positives = 409/899 (45%), Gaps = 117/899 (13%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
+G L I SV+A K +Y+E+ E V EA +G+R + + VPI +MT V+ V
Sbjct: 306 RGRPLGITSVVAA-QTKGKVYVESYSEPAVMEALQGVRGLMIYSAVKVPISDMTTVMTVV 364
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAK 126
K + + ++ WVRM G++KGDLA V V + + ++ +PR+D L++ +
Sbjct: 365 PKKVPVKKNDWVRMTRGHFKGDLALVKHVRDSGLKCVIQCVPRLD-HTLSDLPPEEAKIR 423
Query: 127 KKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENI-GGMLFKDGFLYKTVSMKSI-- 183
++ PP +F N E + R+R P D + G + DG+L K V++ ++
Sbjct: 424 RRTVRPPQKFYNSQEVASMGKHGLRQRFPGMNDVMCDFYDGNYYHDGYLLKEVTIGTVVK 483
Query: 184 -SAQNIQPTFDELEKFR--------------------TPGENGESDIASLSTLFA----- 217
+ PT DEL++FR + S ++ LS L
Sbjct: 484 PCTADDPPTLDELQRFRHKSRAGDGDGYDDGDEEDENEGSKMAGSLLSELSELQGKTGLA 543
Query: 218 ---NRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP-------EMKGLPKTLAV 267
+ +G M GD + VI+GDL ++G + ++ V +RP ++ G+ + +
Sbjct: 544 SGGSNDRG-LMIGDTIEVIEGDLVGMQGKILSLEGTTVKVRPNNDAALADLGGMDEVEFL 602
Query: 268 NSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH----------VLIILSDTTKEDIRV 317
S ++ K+ G HVKV+ G A TG+V+ VE ++L+D T ++I V
Sbjct: 603 IS-QIRKFIAVGAHVKVMDGRYANETGVVVAVENMDGEEGSDFDCTAVVLTDMTHKEISV 661
Query: 318 FADDVVESSEVTTGITKIGDYELRDLVLLDN----NSFGVIIRVESEAFQVLKGVPDRPE 373
+ ES+E+ +G K+ YEL DLV+L N GVI+RV E F V+ E
Sbjct: 662 RTSQLQESAEIASGQDKLAGYELHDLVVLSGGGSANEVGVIVRVGREEFTVINNHGIARE 721
Query: 374 VALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDR 433
+LR + +++ D N + D V IVEGP KGK ++ + R LF++ +
Sbjct: 722 ARPEELRGKRNSASQRAVALDVQANQIRCGDSVTIVEGPHKGKVATIKRMSRAQLFLYSQ 781
Query: 434 HHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAG 493
E++G +S SCV+ GG++A + + + +P P S
Sbjct: 782 FRSENSGIFVVRSRSCVLTGGAKA----SRSGGAGGAAGESPFSTPMSQSNGRGAAAAMR 837
Query: 494 GRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTV------- 546
++L+G TV+++ G +KGY G V V+VEL S++K V V
Sbjct: 838 AER------DESLLGKTVRIQAGQWKGYLGTVSHTTATHVQVELHSRLKKVMVVKERVHV 891
Query: 547 --DRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGM-RT 603
D+ +D V S T MG TPMH TP+H TPM GATP+HDG T
Sbjct: 892 VGDKFGATDAGVGSNDMGITTVPFMGGITPMHGGETPMHGGATPMH-GGATPMHDGYGAT 950
Query: 604 P-----MRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWAS 658
P M D W P + + ++ WG+ G+ + SG A
Sbjct: 951 PSHSSGMSDDIWRPGGSIDREAEGVDESMNDGWGSG----NGNVIKKQENQFGDSSGDAV 1006
Query: 659 TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGL 718
+ G+ SD G ST+ P T + S + P G GG+
Sbjct: 1007 SGWGDSSDHG-----GSTWT--------------PNTGEAESMVKHDPDG--YGNDAGGM 1045
Query: 719 DAMSPVIGADNEGP-WFMPDILVRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITAL 777
D + + G+ E WFM + V+ + + VI+E+ +GS VV + T+T
Sbjct: 1046 D--TAMEGSGEEAAVWFMERVCVQLK-KNTAQAVIKEI--NGSMAVV--EMEDKSTLTVR 1098
Query: 778 PNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLA 836
E+ +VPP++ D + + GG G G+L+ +DGTD I+K + + + KI+D LAK++
Sbjct: 1099 NGEVSMVPPQEHDMVLVTGGADVGVEGELVCIDGTDAILK-ESNENFKIVDFIHLAKIS 1156
>gi|409047487|gb|EKM56966.1| hypothetical protein PHACADRAFT_93212 [Phanerochaete carnosa
HHB-10118-sp]
Length = 989
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 242/758 (31%), Positives = 366/758 (48%), Gaps = 95/758 (12%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K +D LQI S D L IY+EA V+EAC GL I+ S+ + LVPI
Sbjct: 209 MRKSLDLEFTNRPLQILSAFQRDSLPGMIYVEARSAKMVQEACNGLVGIFPSRGINLVPI 268
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA 116
EM+ +L ++ + + ++ +WVR++ G Y+GDLA+V+D+ + V +K IPRIDL
Sbjct: 269 EEMSSLLQIKKQDVTVAPGSWVRIRRGKYQGDLAQVMDITENGEEVGLKFIPRIDLNPKD 328
Query: 117 NKLEGREVAKKKP--------FVPPPRFMNVDEARELHIR--VERRRDPMTGDYFENIGG 166
+ G + +KKP PP RF N +EA ++ R V +R F+N
Sbjct: 329 EPM-GLDKKRKKPVPGSSGFSMRPPQRFFNYEEAVRVYGRKAVSKRNQVYV---FQND-- 382
Query: 167 MLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIAS--LSTLFANRKKGH- 223
+KDGF+ K + ++ ++ PT DE+ +F T G++G + A+ LS + KK
Sbjct: 383 -TYKDGFIEKDFKISALQLDDVNPTLDEITQF-TRGQDGADNDANVDLSIIAEASKKAAI 440
Query: 224 --FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP---EMKGLPKTLAVNSKELCKYFEP 278
GD + V +G+ + G V V+++ V I+P E G + + + ++ + K F+
Sbjct: 441 AVLQPGDHIEVFEGEQAGVHGTVHAVEQDVVTIQPVGVEFDG--QKIQIPARSVRKRFKA 498
Query: 279 GNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDY 338
G+HVKV++G A TG+V+ V +V+ LSD T +++ F+ D+ E++EV TG +G+Y
Sbjct: 499 GDHVKVMTGQNADETGLVVSVMDNVVTFLSDMTMQEVSCFSKDLREAAEVGTGTNTVGNY 558
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNK 397
EL DLV LD + GVI + E ++F+VL +V LVK +I + + + D
Sbjct: 559 ELHDLVQLDLQTVGVIFKTERDSFRVLD---QNGQVRLVKPHQISMRRDTHRAIAVDSEG 615
Query: 398 NTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ + V D V+ VEG +G++G V H Y+ ++ +R E+ G ++ S V
Sbjct: 616 HEIRVHDNVKEVEG--EGRKGRVLHTYQAFYAWLFNRDVAENGGVFVTRARSLAPV---T 670
Query: 457 ANGDRNGDA-YSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRL 515
G + G S+ N S G GRG D L+G TV+V
Sbjct: 671 PRGLKLGSTDLSKMNPA------------LSGGAQGGMVGGDMGRGPRDRLIGATVQVIQ 718
Query: 516 GPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS-DNVVVSTPYRDTPRYGMGSETP 574
GP KG G V D G RVEL + K++ + + + N+ S D PR +G P
Sbjct: 719 GPQKGIVGIVKDTNGNIARVELSTGNKIIMIPKDKLKRRNIDGSLEMIDVPRIPLG--LP 776
Query: 575 MHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTS 634
P P P M+ GA+P G RTP NPY + NP S +
Sbjct: 777 NIPLGLPKIPGMSAW---GASP--GGGRTP------NPY------QGGGRTANPYSGSQT 819
Query: 635 PQYQPG---SPPSRAYEAPTPG-SGWASTPGGNYSDAGTPRDSSSTYVNAPSPYL----- 685
P + G P+ + A TP S A TP Y+D TP S+S+ P+PY
Sbjct: 820 PAWGGGMDSRTPNPHHPAKTPAWSASAKTP-NPYADGKTPAWSASS--RTPNPYASTGGW 876
Query: 686 ------PSTPGGQPMTPNSASYLPGTPGGQPMTPGTGG 717
PS+ GG PN AS G G P PG GG
Sbjct: 877 GGSTPKPSSWGGATPAPNGASSSWG--GATPARPGWGG 912
>gi|449545795|gb|EMD36765.1| hypothetical protein CERSUDRAFT_137024 [Ceriporiopsis subvermispora
B]
Length = 1041
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 266/931 (28%), Positives = 418/931 (44%), Gaps = 149/931 (16%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K ID+ QI S D L IY+EA V EAC GL ++ S+ ++LVPI
Sbjct: 115 MRKAIDREFSNRPTQILSAFQRDSLPGMIYVEARSAKQVSEACNGLVGVFPSRGIVLVPI 174
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA 116
EM +L ++ + + ++ +WVR+K G Y+GDLA+V+D+ + V +K IPRIDL
Sbjct: 175 EEMASLLQIKKQDLTVTPGSWVRIKRGKYQGDLAQVMDITENGEEVGLKFIPRIDLNPKD 234
Query: 117 N-KLEGREVAKKK--------PFVPPPRFMNVDEARELHIR--VERRRDPMTGDYFENIG 165
+ LE KKK PP RF N +E +++ R V +R F+N
Sbjct: 235 DGALEAMGKRKKKGAPGTASFSMRPPQRFFNYEEVVKVYGRKGVSKRNQVYV---FQND- 290
Query: 166 GMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDI-ASLSTLFANRKKGH- 223
+KDGF+ K + ++ N+ PT DE+ F + E+D LS + +K
Sbjct: 291 --TYKDGFIEKDFRLTALQLDNVNPTLDEITHFTRGRDGAENDSNVDLSIIADAARKAAI 348
Query: 224 --FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP---EMKGLPKTLAVNSKELCKYFEP 278
GD V V +G+ + G V ++++ V I+P + G + + + ++ + K F+P
Sbjct: 349 SVLQPGDHVEVFEGEQTGVHGTVHAIEQDIVTIQPVGVDFDG--QRIQLPARSVRKRFKP 406
Query: 279 GNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDY 338
G+HVKV++G A TG+V+ V +V+ LSD + +++ VF+ D+ E++EV TG +GDY
Sbjct: 407 GDHVKVMAGKNADETGLVVSVADNVVTFLSDMSMQEVSVFSKDLREAAEVGTGTNVVGDY 466
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNK 397
EL DLV LD + GVI + E ++F+VL +V LV+ +I + + + D
Sbjct: 467 ELHDLVQLDLQTVGVIYKTERDSFRVLD---QNGQVRLVQPHQISMRRDSNRAIATDSEG 523
Query: 398 NTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ + + D V+ ++G +G++G V HI++ F+++R + E+ G ++ S V +
Sbjct: 524 HELRINDNVKEIDG--EGRKGRVLHIHQSFFAFLYNRDYQENGGVFVTRARSLVSLAPKG 581
Query: 457 ANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLG 516
S+ N P + G GP GRG D L+GT+V+V G
Sbjct: 582 HLMKLGSTDLSKMN-----PALMGGAGGMVGSGPM-------GRGPRDRLIGTSVRVIKG 629
Query: 517 PYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI--SDNVVVSTPYRDT--------PR 566
P KGY G + D G RVEL + KV+T+D+ + D+ ST D+ PR
Sbjct: 630 PSKGYVGTIKDTNGPIFRVELLTGNKVITIDKEKLIGYDHKTGSTFPLDSRPGGSMGPPR 689
Query: 567 YGMGS------------------ETPM-HPSRTP--------LHPYM---TPMRDAGA-- 594
GS TP + ++TP +PY TP DA A
Sbjct: 690 TSFGSTFSRTPNPYNNSNNNAFGRTPNPYAAKTPGWGDSGRTPNPYAAGKTPAWDAHART 749
Query: 595 -TPIHDGMRTPMRDRAW------NPYTPMS-----------PPRDNWEDGNPG--SWGT- 633
P DG +TP AW NPY S P R W PG WG+
Sbjct: 750 PNPYADGGKTP----AWGGGRTPNPYASGSSGAPGGFGNATPARPTWGGATPGRSGWGSG 805
Query: 634 ------SPQYQPGSPPSRAYEA---PTPGSGWASTPGGNYSDAGTPRDSSS-------TY 677
P G S + TPG+ +S P G+ S A TPRD ++ +Y
Sbjct: 806 GADGWQQPSTLDGDRESSGWTTETVATPGAAGSSFPSGSMS-AYTPRDVATPAAMGHNSY 864
Query: 678 VNAPSPYL------PSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEG 731
+A +P P++ G ++ LP + P M + G
Sbjct: 865 EDARTPAFGLSAPTPASGAGAYSAQETSEELPAK---WLLDPEISSKQNMIVEVKGSFSG 921
Query: 732 P---WFMPDILVRRSGEESVVGVIREVLPDGSCRVVLGSSGN-GDTITALPNEI--EIVP 785
P W D R+ SV + P + RV S + + +P E + P
Sbjct: 922 PNGGWHKGDYEGRQGVVLSVFDTQQPQFPS-TARVRFSSPVDPAHPVQTVPVEYLWPVHP 980
Query: 786 PRKTDKIKIMGGPHRGATGKLIGVDGTDGIV 816
R + + ++ GPH+G K+ DG ++
Sbjct: 981 DRPDEDVLVLQGPHKGQLAKVQVYDGPGSLI 1011
>gi|298705365|emb|CBJ28655.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1000
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 220/727 (30%), Positives = 350/727 (48%), Gaps = 104/727 (14%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVES 67
G + S + K ++Y+EA E VK A GLR IY K+ VPI +MT VL+V S
Sbjct: 189 GQPFGVTSAVVPAGTKGFLYLEAQNEPAVKAAINGLRGIYHSKLRKVPIPDMTAVLSVRS 248
Query: 68 --KAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVA 125
+A + ++ ++R+K Y DLAKVV+V +R V+ IPRIDL +L+ E R
Sbjct: 249 ATRAKPVRQNQFIRLKRKPYTDDLAKVVEVLAGGERAVVQFIPRIDLVSLSADAETRNA- 307
Query: 126 KKKPFVPPPRFMNVDEAREL--HIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKS- 182
+K PP RF N +E ++ V+RRR GD+ + F +GF+ K V++ +
Sbjct: 308 -RKSLRPPQRFFNPEEIKQASDEAMVDRRRFQGHGDHMDYFQNNFFLNGFVVKEVNVSTW 366
Query: 183 ISAQNIQPTFDELEKFRTPGENGE-----------------------SDIASLSTLFANR 219
+ A + PT +E+++F++ E + D+A +
Sbjct: 367 LRADRVNPTLEEIQRFKSRREKRDPGDGDDSDDERNRDAEDKDTEIMEDLAMAQAMEPTS 426
Query: 220 KKGHFMKGDAVIVIKGDLKNLKGWVEKVDEEN-------VHIRPEMKGLP-KTLAVNSKE 271
F KGD V+V+KGDL +L G V +V + VHI+P ++ L + + + +
Sbjct: 427 DAPLFSKGDTVVVVKGDLTDLMGRVLRVRQTGQSQADAVVHIQPLVEELADEVVELKPDQ 486
Query: 272 LCKYFEPGNHVKVVSGTQAGATGMVLKVEQH-----VLIILSDTTKEDIRVFADDVVESS 326
L KY + G HV+++ G G TG +LK+ ++ ++L+D + +++ ++ E+
Sbjct: 487 LEKYIKVGGHVRIIDGRFTGETGTILKIVKNPDGASRAMVLTDMSSKEL-----ELQETP 541
Query: 327 EVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKL 386
EV+TG+ + YEL DLV+L N GV+ RV E +V+ + V ++R +
Sbjct: 542 EVSTGLDSLQGYELYDLVMLGPNEVGVVTRVNREDLEVVNNSGNVKRVRPQEIRGKRNSQ 601
Query: 387 EKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKS 446
+++ V D +N + V +VV +VEG G +G ++HI R LF+H R H ++AG ++
Sbjct: 602 SRRAFVVDTQQNQLEVDNVVEVVEGQHAGSKGTIKHIDRTTLFLHSRTHTQNAGIFPVRA 661
Query: 447 SSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRN---RGGRGGH 503
S ++ G R N + Y G A +N + R +
Sbjct: 662 RSALLAG--RMNRGQAAVGYM--------------------GEINASAKNDIVKDFRNRN 699
Query: 504 DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS---MISDNV----- 555
D ++ TVKV G +KG G+VV+ V+VEL S++K VT+ RS ++ D
Sbjct: 700 DEMLAKTVKVIRGQHKGLMGQVVEATDTHVKVELHSKLKKVTISRSQVKIVGDQTGAYAG 759
Query: 556 ----------VVSTPYR-DTPRYG-----MGSETPMHPSRTPLHPYMTPMRDAGATPIHD 599
V TPY TP +G GS+TPMH S+TP+H TPM + TP+H
Sbjct: 760 NQFQKPVIGEVPGTPYTMQTPMHGSQTPMHGSQTPMHGSQTPMHGSQTPMHGS-QTPVH- 817
Query: 600 GMRTPMRDRA---WNPYTPMSPPRDNWEDGNP-GSWGTSPQYQPGSPPSRAYEAPTPGSG 655
G +TPM TPM + P G+ G +P + +P A + P G+
Sbjct: 818 GSQTPMHGSQTPIHGSQTPMGGSGGGVGNQTPLGAGGQTPLHGSQTPMHGA-QTPIHGAA 876
Query: 656 WASTPGG 662
TP G
Sbjct: 877 GGETPRG 883
>gi|336372831|gb|EGO01170.1| hypothetical protein SERLA73DRAFT_72140 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1158
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 246/814 (30%), Positives = 381/814 (46%), Gaps = 125/814 (15%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K ID LQ+ S D L IY+E+ V +ACKGL IY S+ + LVPI
Sbjct: 211 MRKAIDLEYTAQPLQVLSAFQRDSLPGMIYVESRSSQQVNQACKGLVGIYPSRGITLVPI 270
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA 116
EM +L ++ + + ++ +WVR+K G Y+GDLA+V+D+ + V +K IPRIDL
Sbjct: 271 EEMASLLQIKKQDLTVTPGSWVRIKRGKYQGDLAQVMDITENGEDVGLKFIPRIDLNPKD 330
Query: 117 N-KLEGREVAK----KKPFVPPPRFMNVDEARELHIR--VERRRDPMTGDYFENIGGMLF 169
L+GR+ K PP RF N +E +++ R V +R F+N +
Sbjct: 331 EASLDGRKRKKIGTGPTTMRPPQRFFNYEEVVKVYGRKQVSKRNQVYV---FQND---TY 384
Query: 170 KDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENG--ESDIASLSTLFANRKKGH---F 224
KDGF+ K + ++ +N+ PT DE+ +F T G++G + LS + +K
Sbjct: 385 KDGFIEKDFKLSALVLENVNPTLDEITRF-TRGQDGAENENPVDLSIIAEASRKAAISVL 443
Query: 225 MKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP---EMKGLPKTLAVNSKELCKYFEPGNH 281
GD V V +G+ + G V+ +++E V I ++ G + + + ++ + K F+PG+H
Sbjct: 444 QPGDHVEVFEGEQAGVHGVVDSINQEVVTITAVGVDIDG--QKIDLPARSVRKRFKPGDH 501
Query: 282 VKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELR 341
VKV++G A TG+V+ V +V+ LSD + +++ VF+ D+ E++EV +G +G+YEL
Sbjct: 502 VKVMAGQNADETGLVVSVSDNVVTFLSDMSMQEVSVFSKDLREAAEVGSGTNIVGNYELH 561
Query: 342 DLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEK-KSNVQDRNKNTV 400
DLV LD + GVI + E ++F+VL +V LV+ +I + ++ D + +
Sbjct: 562 DLVQLDLQTVGVIFKTERDSFRVLD---QNGQVRLVQPHQISMRRNSDRAIATDSEGHEI 618
Query: 401 AVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANG 459
D V+ V+G + ++G V H Y+ F+H+R E+ G ++ S +
Sbjct: 619 RTNDNVKEVDG--EARKGRVLHTYQSFFAFLHNRDIAENGGVFVTRARSLASLAPKGTVI 676
Query: 460 DRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYK 519
NG S+ N P G GG G GRG D L+G TV V G +K
Sbjct: 677 KHNGADLSKMN--------PALAGGAQTGGMVGSGTM--GRGPRDRLIGVTVAVVKGAHK 726
Query: 520 GYRGRVVDVKGQSVRVELESQMKVVTVDRSMI----SDNVV------------------- 556
GY G V D G RVEL + KV+T+++ + +D +
Sbjct: 727 GYVGAVKDTNGPIARVELHTGNKVITIEKEKLRRRNNDGSLEPLEGGNFGMGPPRSFNNN 786
Query: 557 -------VSTPYRD-------TPRYG------MGSE--TP--MHPSRTPLHPY----MTP 588
S PY+ TP +G G E TP SRTP +P+ TP
Sbjct: 787 GGHNNNRTSNPYQQGGQAGGRTPGWGRTPNPYAGGEGRTPGWNQSSRTP-NPFGDGGKTP 845
Query: 589 MRDAGA---TPIHDGMRTPMRD---RAWNPYTPMSPPRDNWEDGNP---GSWGTSPQ--- 636
+A + P D +TP + R NPYT W P G G +P+
Sbjct: 846 AWNASSRTPNPYQDSGKTPAWNASSRTPNPYTSGDAGGSAWGSATPKPNGWGGATPRPAG 905
Query: 637 YQPGSPPSRAYEAPTPG-SGW-ASTP----GGNYSDAGTPRDSSSTYVNAPSPYLPSTPG 690
+ +P + TP +GW +TP G S A +SSS V+ PS STP
Sbjct: 906 WGGATPRPTGWGGATPKPTGWGGATPKPASWGGQSPARPVGESSSWGVSDPSSTWNSTP- 964
Query: 691 GQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPV 724
+A+ PG Q TP TG + A +P
Sbjct: 965 -------AAAATPGYIAAQ--TPSTGYIPARTPA 989
>gi|389746036|gb|EIM87216.1| transcription elongation factor Spt5, partial [Stereum hirsutum
FP-91666 SS1]
Length = 886
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 208/673 (30%), Positives = 326/673 (48%), Gaps = 69/673 (10%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K ID LQI S D L IY+EA + V EAC GL IY S+++MLVPI
Sbjct: 211 MRKAIDLEYTNHPLQILSAFQRDSLPGMIYVEARSQKQVVEACNGLVGIYPSRQIMLVPI 270
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA 116
EM +L ++ + + ++ +WVR+K G Y GDLA+V+D+ V +K IPRIDL
Sbjct: 271 EEMASLLQIKKQDLTVTPGSWVRIKRGKYAGDLAQVMDITENGDEVGLKFIPRIDLNPKD 330
Query: 117 NKLEGREVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFK 170
+ + G + KK P RF N +E ++V R+ + +K
Sbjct: 331 DVMLGGQKRKKGATTMATGVRPAQRFFNYEEV----VKVYGRKQISKRNQVYVFQMDTYK 386
Query: 171 DGFLYKTVSMKSISAQNIQPTFDELEKFR--TPGENGESDIASLSTLFANRKKGH--FMK 226
DGF+ K + ++ ++ PT DE+ KF GE G+ + A+RK
Sbjct: 387 DGFVEKDFKLSALQLDDVNPTLDEITKFAKGQDGEGGDHQVDLSIIAEASRKAAIAVLQP 446
Query: 227 GDAVIVIKGDLKNLKGWVEKVDEENVHIRP---EMKGLPKTLAVNSKELCKYFEPGNHVK 283
GD V V +G+ + G V+ + + V + P E+ G + + V ++ + K F+PG+HVK
Sbjct: 447 GDHVEVFEGEQSGVHGIVDSIAGDVVTVSPVGVELDG--QKMQVPARSVRKRFKPGDHVK 504
Query: 284 VVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDL 343
V++G A TG+V+ V ++++ LSD + +++ VF+ D+ E++EV +G +G+YEL DL
Sbjct: 505 VMTGKNADETGLVVAVSENIVTFLSDMSMQEVSVFSKDLREAAEVGSGTNIVGNYELHDL 564
Query: 344 VLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEK-KSNVQDRNKNTVAV 402
V LD + GVI + E ++F+VL +V LV+ +I + + ++ D + + +
Sbjct: 565 VQLDMQTVGVIFKTERDSFRVLD---QNGQVRLVQPHQISMRRDSHRAIATDSEGHELRI 621
Query: 403 KDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR 461
D V+ ++G +G++G V H ++ F+H+R E+ G ++ S V + N +
Sbjct: 622 NDNVKEIDG--EGRKGRVLHTHQSFFAFLHNRDIAENGGVFVTRARSLASV-APKGNVLK 678
Query: 462 NGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGY 521
G S+ N P S G +G GRG D L+G TV GPYKGY
Sbjct: 679 PGTDLSKMN-----------PALNSGGMVGSGNI---GRGPRDRLIGVTVIAIKGPYKGY 724
Query: 522 RGRVVDVKGQSVRVELESQMKVVTVDRSMI---SDNVVVSTPYRDT-------PRYGMGS 571
G + D G RVEL + KV+T+D+ + + N V P + PR G G
Sbjct: 725 HGTIKDTNGPIARVELNAGNKVITIDKDKLRRRNPNGSVEGPLESSGPPSGYNPRVGGGF 784
Query: 572 ETPMHPSRTPLHPYMTP---MRDAGATPIHDGMRTPM-------RDRAWNPYTPMSPPRD 621
+ RTP +PY P R G RTP R AWN + P
Sbjct: 785 PS---QGRTP-NPYAQPPVGGRTPGWGAPPSSTRTPNPYAEQVGRTPAWNSSSRTPNPYA 840
Query: 622 NWEDGNPGSWGTS 634
+ G +W S
Sbjct: 841 TGDGGKTPAWNAS 853
>gi|402221509|gb|EJU01578.1| hypothetical protein DACRYDRAFT_22655 [Dacryopinax sp. DJM-731 SS1]
Length = 1031
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 276/980 (28%), Positives = 409/980 (41%), Gaps = 217/980 (22%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKA 69
L+I S L IY+EA AHV+ A GL ++ S + LVPI EM +L ++ K
Sbjct: 74 LEIMSAFERSSLPGMIYVEARSAAHVRSAAHGLVGVFVSSPINLVPIEEMASLLRIKKKE 133
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL--QALANKLEGREVAKK 127
+++ +WVR++ G Y+GDLA+V DV +R TVK IPRID+ Q L + VA K
Sbjct: 134 VNIDVGSWVRIRRGRYQGDLAQVTDVVEPGERYTVKYIPRIDVSPQDEDKSLGNKAVAGK 193
Query: 128 KPFV----------PPPRFMNVDEARELH-----IRVERRRDPMTGDYFENIGGMLFKDG 172
K PP +F N++E ++ R + R GD + N G
Sbjct: 194 KRVRNALINTVQGRPPQKFFNMEEITRVYGIRSVNRTKNRTFTFQGDEYYN--------G 245
Query: 173 FLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES-----DIASLSTLFANRKKGHFMKG 227
+ K ++ ++QPT +E+ KF PG + E D+ ++ R G
Sbjct: 246 YCLKEYKANQLAVDDVQPTLEEITKFSGPGADDEGVANKMDLNAIREAAQRRATAVLQPG 305
Query: 228 DAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSG 287
D+V V +G + G ++ + +NV I+P +K + + + V +K + K F G HVKV+SG
Sbjct: 306 DSVEVFEGQQSGVYGVLQSMSGDNVLIQPSLKDMSEVIEVPAKSVRKRFLVGEHVKVMSG 365
Query: 288 TQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLD 347
TG+V+ V+ + + LSDT +++I VFA D+ ++EV T +G+Y L DLV LD
Sbjct: 366 KNVDETGLVIMVDGNTVTFLSDTNQQEITVFAKDLRTAAEVGTSNNTVGNYVLHDLVSLD 425
Query: 348 NNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKC-KLEKKSNVQDRNKNTVAVKDVV 406
+ GVI + ++F+VL V V +I + KS D N+ T D +
Sbjct: 426 QTTVGVIFQTGRDSFRVLD---QYGTVHNVHPHQIAMNRNTAKSIALDHNRETFKQGDNM 482
Query: 407 RIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAY 466
V+G G+ G V H+Y F+H+R E+ G A+SS+
Sbjct: 483 VEVDG--AGRSGVVLHVYSFSAFLHNRTIKENGGVFVAQSSNL----------------- 523
Query: 467 SRFNSLRTPPRIPQSP--GRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGR 524
SR ++++ P P S GGP NRG R L+ V + G YKGY G
Sbjct: 524 SRPDAVKRRAFNPSQPNLSSMSIGGPTP--TNRGDR----RLINVLVTIVKGSYKGYAGT 577
Query: 525 VVDVKGQSVRVELESQMKVVTVDRSMISDN------VVVSTPY----------------- 561
+ DV G RVEL+S KV+T+++ + +S P
Sbjct: 578 IKDVNGTQCRVELQSTRKVITIEQEHLRRKDQNGALRTLSEPTDFGGRDWRSGGGGGGGG 637
Query: 562 ---------------RDTP---RYGMGSETP----------------------MHPSRTP 581
TP RYG G +TP S+TP
Sbjct: 638 RGGFSNRASEYGRNGSQTPSGGRYGAGGKTPGWSAAVGRTPNPYADGGKTPAWSSSSKTP 697
Query: 582 LHPYMTPMRDAGATP------------IHDGMRTPMRD---RAWNPYTPMSPPRDNWEDG 626
+PY T D G TP +G +TP + R NPY + D W
Sbjct: 698 -NPYAT---DGGKTPAWSSSSKTPNPYAQEGAKTPAWNTSSRTPNPYAAANAGGDAWNSS 753
Query: 627 N--------------------PGSWGTSPQYQPGSPPSRAY--EAPTPGSGWAS----TP 660
+ PG S + G+ +Y +P+ G+ WA+ T
Sbjct: 754 SRTPNPYAREGGRTPAAGRSVPGGDANSGGSERGTRNGDSYGGRSPSHGTNWATRDSNTG 813
Query: 661 GGNYSDAGTPRDSSST-YVNAPS----------PYLPSTPGGQPMTPNSASYLPGTPGGQ 709
G Y A TP ++ T Y +AP+ PY +TP G P TP A Y TP G
Sbjct: 814 MGGYDSAPTPAVTAPTPYGSAPTPGPYGAPTPGPYTAATPYGAP-TP--APYGAPTPYGG 870
Query: 710 PM-------TPGTGGLDAMSP-VIGADNEGPWFM--PDILVR------RSGEESVVGVIR 753
P TP L A +P AD+ + + DI+VR G ES G++
Sbjct: 871 PTPGPLGAPTPAWNSLSAPTPGAAAADDRKDYLLGAHDIIVRIVPKYTSHGPESWRGLVP 930
Query: 754 E--------VLP-------DGSCRVVLGSSGN--GDTITALPNEIEIVPPRKTDKIKIMG 796
E LP S RV+ N G T +E VPP + + ++
Sbjct: 931 EGSTGRIISTLPLDQGFQSTASVRVITSPDSNAIGTEQTVPLEHLEPVPPEEGGRAYVLQ 990
Query: 797 GPHRGATGKLIGVDGTDGIV 816
G +G T + +D D V
Sbjct: 991 GEFKGMTVTVQTIDEEDAYV 1010
>gi|409077971|gb|EKM78335.1| hypothetical protein AGABI1DRAFT_75877 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1130
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/570 (31%), Positives = 301/570 (52%), Gaps = 46/570 (8%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M+K +D L I S D L IY+EA V EAC GL +Y ++ LVPI
Sbjct: 199 MRKALDVEFTAKPLAILSAFQRDSLPGMIYVEARSSKQVSEACNGLVGVYLTRIHLVPIE 258
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ---- 113
EM +L ++ + ++ +WVR++ G Y GDLA+V+D+ + + V +K IPRIDL
Sbjct: 259 EMASLLQIKKQEQTVTPGSWVRIRRGKYAGDLAQVMDITDTGEDVGLKFIPRIDLNPRDD 318
Query: 114 -ALANKLEGREVAKKKPFVPPPRFMNVDEARELHIR--VERRRDPMTGDYFENIGGMLFK 170
AL K + PP R N +E +++ R V RR D F+N ++
Sbjct: 319 AALDGKKRKKMTGSGANMRPPQRLFNYEEVAKVYGRKSVTRRSDVYV---FQND---TYR 372
Query: 171 DGFLYKTVSMKSISAQNIQPTFDELEKF--RTPGENGESDIASLSTLFANRKKGHFM--K 226
DGF+ K + ++ +++ PT DE+ +F R GE GE+ + A+RK +
Sbjct: 373 DGFIEKDFKVSALILEDVNPTLDEITQFTRRQDGE-GENPVDLSIIAEASRKAAVLVLQP 431
Query: 227 GDAVIVIKGDLKNLKGWVEKVDEENVHIRP---EMKGLPKTLAVNSKELCKYFEPGNHVK 283
GD V V +G+ + G VE+++++ V I +++G + + + ++ + K F+PG+HVK
Sbjct: 432 GDHVEVFEGEQAGIHGVVEEINQDVVTISAIGFDVEG--QKIEIPARSVRKRFKPGDHVK 489
Query: 284 VVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDL 343
V++G A TG+V+ + +++ LSD + +++ VF+ D+ E++EV +G +G+YEL DL
Sbjct: 490 VMTGQNADETGLVVSIADNIVTFLSDMSMQEVSVFSKDLREAAEVGSGTNIVGNYELHDL 549
Query: 344 VLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV-QDRNKNTVAV 402
V LD + GVI + E ++F+VL +V LV+ +I + + V DR+ + + +
Sbjct: 550 VQLDAQTVGVIFKTERDSFRVLD---QNGQVRLVQPHQISMRRDSNRAVATDRDGHEIRI 606
Query: 403 KDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR 461
D ++ VEG +G++G V HIY+ F+H+R +E+ G ++ + + V + + +
Sbjct: 607 NDNMKEVEG--EGRKGRVLHIYQSFYAFLHNRDIIENGGVFVTRTRALLSV-APKGSLVK 663
Query: 462 NGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGY 521
G S+ N P + Q G G GRG D +G TV V GP+KGY
Sbjct: 664 PGADLSKMN-----PALVQPTGGMV-------GSGNMGRGPKDRHIGVTVTVVKGPHKGY 711
Query: 522 RGRVVDVKGQSVRVELESQMKVVTVDRSMI 551
G + D G RVEL + K++ +D+ +
Sbjct: 712 AGTIKDTNGNIARVELRTGNKLIMIDKEKL 741
>gi|426193971|gb|EKV43903.1| hypothetical protein AGABI2DRAFT_226511 [Agaricus bisporus var.
bisporus H97]
Length = 1130
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/570 (31%), Positives = 301/570 (52%), Gaps = 46/570 (8%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M+K +D L I S D L IY+EA V EAC GL +Y ++ LVPI
Sbjct: 199 MRKALDVEFTAKPLAILSAFQRDSLPGMIYVEARSSKQVSEACNGLVGVYLTRIHLVPIE 258
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ---- 113
EM +L ++ + ++ +WVR++ G Y GDLA+V+D+ + + V +K IPRIDL
Sbjct: 259 EMASLLQIKKQEQTVTPGSWVRIRRGKYAGDLAQVMDITDTGEDVGLKFIPRIDLNPRDD 318
Query: 114 -ALANKLEGREVAKKKPFVPPPRFMNVDEARELHIR--VERRRDPMTGDYFENIGGMLFK 170
AL K + PP R N +E +++ R V RR D F+N ++
Sbjct: 319 AALDGKKRKKMTGSGANMRPPQRLFNYEEVAKVYGRKSVTRRSDVYV---FQND---TYR 372
Query: 171 DGFLYKTVSMKSISAQNIQPTFDELEKF--RTPGENGESDIASLSTLFANRKKGHFM--K 226
DGF+ K + ++ +++ PT DE+ +F R GE GE+ + A+RK +
Sbjct: 373 DGFIEKDFKVSALILEDVNPTLDEITQFTRRQDGE-GENPVDLSIIAEASRKAAVLVLQP 431
Query: 227 GDAVIVIKGDLKNLKGWVEKVDEENVHIRP---EMKGLPKTLAVNSKELCKYFEPGNHVK 283
GD V V +G+ + G VE+++++ V I +++G + + + ++ + K F+PG+HVK
Sbjct: 432 GDHVEVFEGEQAGIHGVVEEINQDVVTISAIGFDVEG--QKIEIPARSVRKRFKPGDHVK 489
Query: 284 VVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDL 343
V++G A TG+V+ + +++ LSD + +++ VF+ D+ E++EV +G +G+YEL DL
Sbjct: 490 VMTGQNADETGLVVSIADNIVTFLSDMSMQEVSVFSKDLREAAEVGSGTNIVGNYELHDL 549
Query: 344 VLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV-QDRNKNTVAV 402
V LD + GVI + E ++F+VL +V LV+ +I + + V DR+ + + +
Sbjct: 550 VQLDAQTVGVIFKTERDSFRVLD---QNGQVRLVQPHQISMRRDSNRAVATDRDGHEIRI 606
Query: 403 KDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR 461
D ++ VEG +G++G V HIY+ F+H+R +E+ G ++ + + V + + +
Sbjct: 607 NDNMKEVEG--EGRKGRVLHIYQSFYAFLHNRDIIENGGVFVTRTRALLSV-APKGSLVK 663
Query: 462 NGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGY 521
G S+ N P + Q G G GRG D +G TV V GP+KGY
Sbjct: 664 PGADLSKMN-----PALVQPTGGMV-------GSGNMGRGPKDRHIGVTVTVVKGPHKGY 711
Query: 522 RGRVVDVKGQSVRVELESQMKVVTVDRSMI 551
G + D G RVEL + K++ +D+ +
Sbjct: 712 AGTIKDTNGNIARVELRTGNKLIMIDKEKL 741
>gi|213405082|ref|XP_002173313.1| transcription elongation factor spt5 [Schizosaccharomyces japonicus
yFS275]
gi|212001360|gb|EEB07020.1| transcription elongation factor spt5 [Schizosaccharomyces japonicus
yFS275]
Length = 951
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 244/774 (31%), Positives = 353/774 (45%), Gaps = 113/774 (14%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M+K +D G L I S D L YIYIEA K+AHV A +G+ N+Y Q ++LVPI+
Sbjct: 205 MRKAMDLQYSGRPLDIISAFQRDSLIGYIYIEARKQAHVLAALQGVVNVYPQNMILVPIK 264
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
EM D+L V+ K ++L +VR++ G Y GDLA+V ++ ++L+PR+D
Sbjct: 265 EMPDLLKVQKKTVELLPGAYVRIRRGKYAGDLAQVDNLSENGLNARIRLVPRLDYV---- 320
Query: 118 KLEGREVAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYK 176
+ ++ P P PR N EA + + RR P Y ++DGFL K
Sbjct: 321 -----DAKRRHPTSRPQPRLFNESEALKNNPTKLSRRGPRQFMY----NSEEYEDGFLVK 371
Query: 177 TVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH--FMKGDAVIVIK 234
V + S+ + + PT +E+ +F E+ E D+ SL+ K GH F GD V V
Sbjct: 372 DVRIASLITEGVNPTLEEVSRFHQ--EDEEMDLTSLAQSI---KGGHADFQPGDHVEVYI 426
Query: 235 GDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATG 294
G+ + G VE V V +R GL L V S+ L K F+ G+HVKV+SG TG
Sbjct: 427 GEQAGVSGVVENVHGSIVTLRSP-DGL--KLDVPSRGLRKKFKHGDHVKVISGKYKDDTG 483
Query: 295 MVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVI 354
MV+++ + + SDTT ++ VF D+ E+S T + Y+L DLV LD N+ I
Sbjct: 484 MVVRINKDEVTFFSDTTLSELTVFFRDLGEAS---TAQSINSAYDLHDLVQLDVNTVACI 540
Query: 355 IRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV-QDRNKNTVAVKDVVRIVEGPC 413
V+ + ++V + V + +I K + + V DRN + + + D V+ V G
Sbjct: 541 FSVDRDVYKV---IDQNGGVRTITASQISMKHDHRRGVATDRNGSEIRIGDKVKEVNG-- 595
Query: 414 KGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLR 473
+GKQG + HIYR +F+H+R + E+ G A+S + V A G R ++ N
Sbjct: 596 EGKQGTILHIYRAFVFLHNRDNPENNGVFVARSRNVATVA---AKGARISTDLTKLN--- 649
Query: 474 TPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSV 533
P I R PPA +R G D VG TV++R GP KG G + D +
Sbjct: 650 --PAISNGMPR-----PPAANLSR--TIGRDKAVGATVRIRRGPMKGLMGIIKDTTDLNA 700
Query: 534 RVELESQMKVVTV-----------------------DRSMISDNVVVSTPYRDTPRYGMG 570
RVEL + K VTV +R + S P + P + G
Sbjct: 701 RVELHTGNKTVTVPKDSLMYTTKTGQLISYQEFVERNRGIRSGGPGGGYPGGNMPVWAQG 760
Query: 571 SETPMHP---SRTPLHPYMTPMRDAGATPIHD-GMRTPMRDRAWNP--YTPMSPPRDNWE 624
+ TPM SRTP TP G +TP AWN TP W
Sbjct: 761 ARTPMAQAGGSRTPA------WNSGSKTPAWSMGSKTP----AWNAGSKTPA------WN 804
Query: 625 DGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPY 684
G+ +P + GS + A+ A + W S GG S+A + S + NA S
Sbjct: 805 SGS-----KTPAWNAGS-KTPAWNAGSKTPAWNS--GG--SNAWSTDSSRTPAWNADSSK 854
Query: 685 LPSTPGGQPMTP---NSASYLP--GTPGGQPMTPGTGGLDAMSPVIGADNEGPW 733
P+ TP N +S P G GG+ TP G +P G + PW
Sbjct: 855 TPAWNADSSKTPTWGNDSSKTPAWGNDGGK--TPAWGADGGKTPSYGGFSAAPW 906
>gi|395327509|gb|EJF59908.1| transcription elongation factor Spt5 [Dichomitus squalens LYAD-421
SS1]
Length = 1098
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 248/847 (29%), Positives = 379/847 (44%), Gaps = 132/847 (15%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K +D LQI S D L IY+EA V EA GL I+ S+ ++LVPI
Sbjct: 196 MRKALDLSFSNHPLQILSAFQRDSLPGMIYVEARSAKQVSEAINGLVGIFPSRGIVLVPI 255
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ--- 113
EM +L ++ + + ++ +WVR+K G Y+GDLA+V+D+ + V +K IPRIDL
Sbjct: 256 EEMASLLQIKQQELTVTPGSWVRIKRGKYQGDLAQVMDITENGEEVGLKFIPRIDLNPKD 315
Query: 114 --ALANKLEGREVAKKKPFV--PPPRFMNVDEARELHIR--VERRRDPMTGDYFENIGGM 167
AL K + A F PP RF N +E +++ R V +R F+N
Sbjct: 316 DSALDGKKRKKAGAGLSSFSMRPPQRFFNYEEVVKVYGRKSVAKRNQVYV---FQND--- 369
Query: 168 LFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIAS--LSTLFANRKKGH-- 223
+KDGFL K + ++ ++ PT DE+ +F T G++G + A+ LS + +K
Sbjct: 370 TYKDGFLEKDFRLTALQLDDVNPTLDEITRF-TRGQDGTENEANVDLSIIAEASRKAAIS 428
Query: 224 -FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNH 281
GD V V +G+ + G V ++++ V I PE + + + ++ + K F+PG+H
Sbjct: 429 VLQPGDHVEVFEGEQSGVHGTVHSIEQDVVTIEPEGVDFDGQRVQIPARSVRKRFKPGDH 488
Query: 282 VKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELR 341
VKV++G A TG+V+ V +V+ LSD T +++ VF+ D+ E++EV TG +G+YEL
Sbjct: 489 VKVMTGKNADETGLVVSVLDNVVTFLSDMTMQEVSVFSKDLREAAEVGTGTNIVGNYELH 548
Query: 342 DLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV-QDRNKNTV 400
DLV +D + GVI + E ++F+VL +V LV+ +I + + + D + +
Sbjct: 549 DLVQIDQQTVGVIFKTERDSFRVLD---QNGQVRLVQPHQITMRRDSNRAIAMDSEGHEL 605
Query: 401 AVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANG 459
D V+ V+G + ++G V H ++ F+H+R E+ G ++ S +
Sbjct: 606 RAGDNVKEVDG--EQRKGRVLHTHQSFFAFLHNRDIAENGGVFVTRARSLASLAPKGNVM 663
Query: 460 DRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYK 519
G S+ N + GP D L+G +V V GP K
Sbjct: 664 KLGGTDLSKMNPALSGGAGGMVGSGMMGRGP------------RDRLIGVSVTVIKGPNK 711
Query: 520 GYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS----DNVVVS----------------- 558
GY G V D G RVEL + KV+T+D+ + D + +
Sbjct: 712 GYVGTVKDTNGPHARVELLTGNKVITIDKEKLRRRNPDGSLEALERPMANMAPPRAPGFG 771
Query: 559 -----TPYRD-------TPRYGMGSET--PMHPSRTPLHPYMT----PMRDAGATPIHDG 600
PY TP +G T P + SRTP + P + G TP D
Sbjct: 772 GGQTPNPYNQGGAAGGRTPGWGANGRTPNPYNDSRTPAWSANSRTPNPYAEHGKTPAWDA 831
Query: 601 M-RTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAY-------EAPTP 652
RTP NPY N G+ G +P + S Y A
Sbjct: 832 TARTP------NPY-------------NQGAGGKTPAWNTSSRTPNPYANGANNGAASVW 872
Query: 653 GSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPS-TPGGQPMTPNSASY-LPGTPGGQP 710
G PGG + D+ PR + + Y A +P P+ P TP Y P G P
Sbjct: 873 GGATPGRPGGGF-DSWDPRAAPTPYAAAFTPGAPTPAPYASIQTPGVYEYQTPAQTGSYP 931
Query: 711 MTPGT--GGLDAMSPVIGADNEGPW-FMPDILVRRSGEESVVGVIREVLPDGSCRVVLGS 767
TPG GG M+ E P+ P L+ + V G++ EV R GS
Sbjct: 932 QTPGVMGGGSYGMT-------ESPFDISPKWLLDPELADKVRGIMVEV------RGTFGS 978
Query: 768 SG--NGD 772
+G NGD
Sbjct: 979 AGWHNGD 985
>gi|443896031|dbj|GAC73375.1| RNA polymerase II transcription elongation factor DSIF/SUPT5H/SPT5
[Pseudozyma antarctica T-34]
Length = 948
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 178/566 (31%), Positives = 296/566 (52%), Gaps = 49/566 (8%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK---VMLVPIREMTDVLAVES 67
++I S D + +YIEA + V +AC GL +Y+++ + L+PI EM D+L ++
Sbjct: 220 MRIISAFCRDTIPGKVYIEARRADDVVKACNGLAGVYARQTTSLHLIPISEMADLLKLQK 279
Query: 68 KAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKK 127
++ WVR+K G Y GDLA+V+DV + V +K+IPRIDL + + + +K
Sbjct: 280 VQNEIQVGGWVRIKRGKYAGDLAQVLDVSENGEEVGLKMIPRIDLSPKDSGVYTDSLGRK 339
Query: 128 K-----------PFVPPPRFMNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGFLY 175
+ F PP RF N +E ++ + + +R + F+N ++DG+L
Sbjct: 340 RKKGAGASAATVAFRPPQRFFNPEEVQKAYPKDTPTKRGTVW--VFQNDS---YRDGYLE 394
Query: 176 KTVSMKSISAQNIQPTFDELEKF--RTPGENGESDIASLS-TLFANRKK----GHFMKGD 228
K V + I +N+ PT DE+ KF + E+G S + ++ +L A+ K D
Sbjct: 395 KDVRVTGIITENVNPTLDEITKFAGESSAEDGMSKLGAVDLSLIADASKKATEALLQPKD 454
Query: 229 AVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGL-PKTLAVNSKELCKYFEPGNHVKVVSG 287
V + +G+ + G V+ ++ E + I+ E + L + + V ++ + K F+PG+H+KV+SG
Sbjct: 455 QVEIFEGEQAGMYGTVKAINNEVITIQLEHEDLMDQIVEVPARSVRKRFKPGDHIKVMSG 514
Query: 288 TQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLD 347
A TG+V+KVE +V LSD + +++ VF+ D+ +++EV +G+ I YEL +LV LD
Sbjct: 515 KHADETGLVVKVEDNVTTFLSDLSMQEVSVFSKDIRQAAEVGSGVNVISGYELHNLVQLD 574
Query: 348 NNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE-KKSNVQDRNKNTVAVKDVV 406
+ G+I +E E+F+VL +V +VK +I K + ++ D + N + D+V
Sbjct: 575 AQTVGIIFNIERESFKVLDQT---GQVVIVKPHQISSKKDTSRAFALDHDGNEIRAGDMV 631
Query: 407 RIVEGP-CKGKQGPVEHIYRG-ILFIHDRHHLEHAGFICAKSSSC--VVVGGSRANGDRN 462
+ V GP + + G V HIY+ I+F+H+R + E+ G A++ + + +
Sbjct: 632 KEVSGPFSRLRNGQVLHIYQSMIVFLHNREYTENGGVFIARARTLEPLAPKSVSTKAKKE 691
Query: 463 GDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGR--GGHDALVGTTVKVRLGPYKG 520
GD SR N P + GG R G R GG D G V + GPYK
Sbjct: 692 GDDLSRMN-----------PALSNLGGGANDVRVEGVRRFGGRDMHKGKNVAIIKGPYKT 740
Query: 521 YRGRVVDVKGQSVRVELESQMKVVTV 546
YRGR+ + G R+EL S K +TV
Sbjct: 741 YRGRITETTGNMARIELTSVSKPITV 766
>gi|256080856|ref|XP_002576692.1| suppressor of ty [Schistosoma mansoni]
gi|353232567|emb|CCD79922.1| putative suppressor of ty [Schistosoma mansoni]
Length = 846
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 216/642 (33%), Positives = 314/642 (48%), Gaps = 60/642 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLR----NIYSQKVMLVPIREMTDVLAVE 66
LQI+S A + LK YIY+EA K+ HVK+A G+ ++Y Q+ LVPI EMT+V+ V
Sbjct: 206 LQIKSAFAKEGLKGYIYVEAFKQTHVKQAIDGITALRLSMYKQQ--LVPIEEMTEVVRVV 263
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANK-LEGREVA 125
+ L D WVR+K G Y+ DLA V V++ + V +KL+PRID + N+ E +
Sbjct: 264 KETGQLKPDQWVRIKSGLYRDDLALVEYVEDAQNLVGLKLVPRIDYERKRNRGTETEDDN 323
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K K F P P N A +L RV+R M FE G DGFL+K + ++
Sbjct: 324 KFKRFKRPAPALFN---ASKLSDRVQRDGSSMV---FE--GNRYDADGFLHKQFRINAVF 375
Query: 185 AQNIQPTFDELEKFR-TPGE------NGESDIASLSTLFANRKKGH-FMKGDAVIVIKGD 236
+ I+PT ELE+F TP + S + H F GD V V +GD
Sbjct: 376 TEGIRPTLAELERFHHTPDSLQIAAAAANAAANLTSAVHVEIASNHCFTPGDVVEVCEGD 435
Query: 237 LKNLKGWVEKVDEEN-VHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
LKNL+G V ++ N + ++P L + + EL K+F G+HVKV+SG TG+
Sbjct: 436 LKNLRGKVVSIEGNNRIIVQPNHSDLREPIPFTPVELRKFFNQGDHVKVLSGRHVNETGL 495
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
V++ + + ++LSD + +++V D+ + T + G +L DLV +D + GV++
Sbjct: 496 VIRFDPSLAVVLSDHSMNEMKVAPKDLRLWQDRATTVESSGHVQLMDLVQVDPQTVGVVV 555
Query: 356 RVESEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEG 411
VE + VL K V + AL +L ++ + D N N++ +K VR++E
Sbjct: 556 HVERDQVSVLTCFGKVVNLKSNTALRRLNTVR----RPPQALDHNGNSIQLKQTVRLLEK 611
Query: 412 PCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNS 471
P G G V+H+YR FI+ R HLE+AG + AK+ + S+ G+ +A + S
Sbjct: 612 PYCGLIGEVKHLYRSWAFIYCRTHLENAGLVVAKTRQLSALNTSQG-GNEQSNAENGI-S 669
Query: 472 LRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
++T I G + GG GGR +G R LVG T + G KG G + D
Sbjct: 670 MKT---ITPISGARNFGGNNEGGRGKGSRNERQ-LVGRTALIVKGTLKGLLGIICDATPT 725
Query: 532 SVRVELESQMKVVTVDRSMI----SDNVVVSTPY-RDTPRYGMGSETPMHPSRTPLHPY- 585
V +EL SQ K V V R + S ++ T Y TPR TPM RTP Y
Sbjct: 726 HVVLELHSQFKKVPVARENMALLDSGGRIMDTQYGATTPRI-----TPMREMRTPQLAYG 780
Query: 586 --------MTPMRDAGATP--IHDGMRTPMRDRAWNPYTPMS 617
TP D+ P + GM TP P TP S
Sbjct: 781 AQTPHAASTTPRGDSTPLPSAFNAGMATPKISNLDEPMTPSS 822
>gi|390605232|gb|EIN14623.1| hypothetical protein PUNSTDRAFT_81098 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 967
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 217/744 (29%), Positives = 347/744 (46%), Gaps = 77/744 (10%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K ID G LQI S D L IY+EA V +AC GL ++ ++ LVPI
Sbjct: 36 MRKAIDVEYSGRPLQILSAFERDSLPGMIYVEARSAKQVMDACNGLVGVFFTRPPALVPI 95
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ--- 113
EM +L ++ + + ++ +WVR++ G Y+GDLA+V+D+ + V +K +PRIDL
Sbjct: 96 EEMDKLLQLKKQEVTVTPGSWVRIRRGKYQGDLAQVMDITENGEEVGLKFVPRIDLNPKD 155
Query: 114 -ALANKLEGREVAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKD 171
A+ + ++ A V PP RF N +E ++V R+ + +KD
Sbjct: 156 DMTADGKKRKKTATTATGVRPPQRFFNYEEV----VKVYGRKAVSKRNQVYVFQSDTYKD 211
Query: 172 GFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIAS----LSTLFANRKKGH---F 224
GF+ K + ++ ++ PT DE+ F E G D LS + +K
Sbjct: 212 GFIEKDFRLSALQLDDVVPTLDEISLFSRDQEGGGMDEGGNKIDLSIIAEASRKAAIAVL 271
Query: 225 MKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVK 283
GD + V +G+ ++G VE V + V I + L + + + ++ + K F+PG+HVK
Sbjct: 272 QPGDHIEVFEGEQAGVQGVVEGVQGDLVTITAQGVDLEGQKIDLPARSVRKRFKPGDHVK 331
Query: 284 VVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDL 343
V++G A TG+V+ V +V+ LSD + +++ VFA D+ E++EV + +G+YEL DL
Sbjct: 332 VMNGKNADETGLVVSVMDNVVTFLSDMSMQEVSVFAKDLREAAEVGSSTNIVGNYELHDL 391
Query: 344 VLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEK-KSNVQDRNKNTVAV 402
V LD + GVI + E ++F+VL +V LV+ +I + + ++ D + + V
Sbjct: 392 VQLDLQTVGVIFKTEHDSFRVLD---QHGQVRLVQPHQISMRRDSLRAIATDSEGHELRV 448
Query: 403 KDVVRIVEGPCKGKQGPVEHIYRG-ILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR 461
D V+ V+G +G++G V HI++ F+H+R +E+ G ++ S + + N +
Sbjct: 449 GDNVKEVDG--EGRKGQVLHIHQSHFAFLHNREIVENGGVFVTRARSLASL-APKGNAMK 505
Query: 462 NGDA-YSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKG 520
G S+ N P G S GG G GRG D L+G +V V GP KG
Sbjct: 506 PGVGDLSKMN--------PAMSGGASLGGMVGSGNI--GRGPRDRLIGVSVAVIKGPNKG 555
Query: 521 YRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVST-------PYRDTPRYGMGSET 573
G + D G RVEL + KV+++++ + +++ Y G GS
Sbjct: 556 LHGIIKDTNGPIARVELTANNKVISIEKEKLKRFNLMTKKLENLEGAYSSFSGRGRGSMA 615
Query: 574 PMHPSRTPLHPYMTPMRD------AGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGN 627
P RTP +GATP RTP NPYT + P N
Sbjct: 616 PPQGGRTPAWGGGASGGATPGWGVSGATPGWGASRTP------NPYTTGATPAWNTSSRT 669
Query: 628 PGSW---GTSPQYQPGSPPSRAY---------EAPTPGSGW------ASTPGGNYSDAGT 669
P + G +P + G+ Y TPG W A G S
Sbjct: 670 PNPYANGGKTPAWDAGARTPNPYAGGGGNAAWGGATPGRSWGGGASPAHPTGFGGSTPAR 729
Query: 670 PRDSSSTYVNAPSPYLPSTPGGQP 693
P +S+++ + SP PS G+P
Sbjct: 730 PTNSNTSSWGSASPARPSGGWGEP 753
>gi|392560076|gb|EIW53259.1| transcription elongation factor Spt5 [Trametes versicolor FP-101664
SS1]
Length = 1098
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 237/782 (30%), Positives = 363/782 (46%), Gaps = 123/782 (15%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K +D LQI S D L+ IY+EA V EA GL ++ S+ + LVPI
Sbjct: 198 MRKAVDLEYSNHPLQILSAFQRDSLQGMIYVEARSAKQVSEAINGLVGVFPSRGINLVPI 257
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ--- 113
EM +L ++ + + ++ TWVR+K G Y+GDLA+V+D+ + V +K IPRIDL
Sbjct: 258 EEMASLLQIKQQELTVTPGTWVRIKRGKYQGDLAQVMDITENGEEVGLKFIPRIDLNPKD 317
Query: 114 --ALANKLEGREVAKKKPF--VPPPRFMNVDEARELHIR--VERRRDPMTGDYFENIGGM 167
A+ K + A F PP RF N +E +++ R V +R F+N
Sbjct: 318 DAAIDGKKRKKAGAGLSSFNMRPPQRFFNYEEVVKVYGRKGVAKRNQVYV---FQND--- 371
Query: 168 LFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENG---ESDIASLSTLFANRKKGH- 223
+KDGF+ K + ++ ++ PT DE+ +F T G++G ES++ A+RK
Sbjct: 372 TYKDGFIEKDFRLAALQLDDVNPTLDEITRF-TRGQDGTENESNVDLSIIAEASRKAAIS 430
Query: 224 -FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP---EMKGLPKTLAVNSKELCKYFEPG 279
GD V V +G+ + G V ++ + V I P + G + + + ++ + K F+PG
Sbjct: 431 VLQPGDHVEVFEGEQSGVHGTVHSIEGDVVTIEPVGVDFDG--QRIQLPARSVRKRFKPG 488
Query: 280 NHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYE 339
+HVKV++G A TG+V+ V +V+ LSD T +++ VF+ D+ E++EV TG +G+YE
Sbjct: 489 DHVKVMTGKNADETGLVVSVIDNVVTFLSDMTMQEVSVFSKDLREAAEVGTGTNIVGNYE 548
Query: 340 LRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV-QDRNKN 398
L DLV +D + GVI + E ++F+VL +V LV+ +I + + + D +
Sbjct: 549 LHDLVQIDQQTVGVIFKTERDSFRVLD---QNGQVRLVQPHQITMRRDSNRAIATDSEGH 605
Query: 399 TVAVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRA 457
+ V D V+ V+G + ++G V H ++ F+H+R + E+ G ++ S + +
Sbjct: 606 ELRVGDNVKEVDG--ENRKGRVLHTHQSFFAFLHNRDYSENGGVFVTRARSLASL-APKG 662
Query: 458 NGDRNGDA-YSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLG 516
N + G+ S+ N S G G GRG D L+G +V V G
Sbjct: 663 NILKLGNTDLSKMNPA------------LSGGAGGMVGSGNIGRGPRDRLIGVSVTVIKG 710
Query: 517 PYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMH 576
P KGY G + D G RVEL + KV+T+D+ + R P GS +
Sbjct: 711 PSKGYVGTIKDTNGPHARVELLTGNKVITIDKEKLR---------RRNPD---GSLEALE 758
Query: 577 PSRTPLHPYMTPMRDAGA-----TPIHDGMRTPMRDRAW-------NPYTPMSPPRDNWE 624
S M P R G P + G RTP AW NPYT P
Sbjct: 759 KS----FAAMAPPRAGGFGGQTPNPYNQGGRTP----AWGQTGRTPNPYTNSQTP----- 805
Query: 625 DGNPGSWGTSPQ----YQPGSPPSRAYEAPTPG---SGWASTPGGNYSDAGTPRDSSST- 676
+W S + Y G P+ A TP G TP N S + TP ++
Sbjct: 806 -----AWMASSRTPNPYAEGKTPAWDATARTPNPYTQGGGKTPAWN-SSSRTPNPYANGG 859
Query: 677 ---------------YVNAPSPYLPSTPGGQPM-TPNSASYLP---GTP--GGQPMTPGT 715
+ AP+P+ TPG P P S+ P TP G P TPG
Sbjct: 860 GSSSAWAAGSATPGRWDAAPTPFAAFTPGAAPTPAPYSSIQTPFDYQTPAGGAYPQTPGV 919
Query: 716 GG 717
G
Sbjct: 920 MG 921
>gi|393233981|gb|EJD41548.1| transcription elongation factor Spt5 [Auricularia delicata
TFB-10046 SS5]
Length = 1167
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 212/740 (28%), Positives = 341/740 (46%), Gaps = 79/740 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKA 69
LQI S D L IYIEA + V A +G ++ S+ + LVPI EM +L + K
Sbjct: 208 LQILSAFQHDSLPGMIYIEARGQQAVLTALQGFVGVFLSRGITLVPIDEMASLLQIRKKE 267
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKP 129
+ L+R WVR+K G Y GDLA+V+D+ + V ++ +PRI+L ++L+G++ +
Sbjct: 268 VTLNRGDWVRIKRGRYVGDLAQVIDLSENGEDVGLRFVPRIELNPRDDQLDGKKKGSRTA 327
Query: 130 FV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNI 188
PP R N +E +++ R R P F G + +GF K + +I+ N+
Sbjct: 328 TTRPPQRLFNYEEVIKVYGRKAVTRRPGASSLFV-FQGETYVNGFCEKDFRISAITTDNV 386
Query: 189 QPTFDELEKFRTPGENG---ESDIASLSTLFANRKKGHFM---KGDAVIVIKGDLKNLKG 242
PT +E+E+F E G ES LS + +K + GD V V +G+ + G
Sbjct: 387 APTLEEVERFSARKEFGLEAESGKVDLSVIADAARKAAIVVLQPGDHVEVYEGEQTGVTG 446
Query: 243 WVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQ 301
VE V + V +R E + + + V ++ + K F+PG+HVKV++G +G+V+ V
Sbjct: 447 VVESVMGDIVTLRAEGVDIDGQKIEVPARSVRKRFKPGDHVKVMTGKNVDESGLVVSVAD 506
Query: 302 HVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEA 361
+V+ +SD + +++ VFA D+ E++EV +G+YEL DLV LD + GVI + E ++
Sbjct: 507 NVVTFISDMSMQEVSVFAKDLREAAEVGASTNIVGNYELHDLVQLDPMTVGVIFKTERDS 566
Query: 362 FQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPV 420
F+VL +V V+ +I + K + + D ++V D ++ V+G +G++G +
Sbjct: 567 FRVLD---HHGQVRTVQPHQISMRQNKFTTIATDSEGYELSVGDNLKEVDG--EGRKGRL 621
Query: 421 EHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIP 479
H+Y+ F+H+R E+ G A++ S + R NG ++ N
Sbjct: 622 LHVYQSYFAFLHNREIAENGGVFVARARSLAPL-APRGTSKTNGMDLTKMN--------- 671
Query: 480 QSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELES 539
P P G +RG R D G V + G YKGY G + + G RVEL +
Sbjct: 672 --PAVAGGAAPGTGSFDRGHR---DPFRGVPVTIVQGGYKGYIGTIKETNGVHARVELST 726
Query: 540 QMKVVTVDRSMISDN------VVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAG 593
K +T++RS + V + P R G+ + P M P R
Sbjct: 727 NNKTITIERSKLRRREANGALVALEAPRRGGFGGTRGANV--------MGPAMGPPR--- 775
Query: 594 ATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDG--NPGSWGTSPQYQPGSPPSRAYEAPT 651
TP NPY P W G PG WG G+ P+ T
Sbjct: 776 -TP--------------NPYGPAGGKTPGWGPGGDTPG-WGAG-----GATPAWGNGGRT 814
Query: 652 PGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPM 711
PG G + + TP +++ P+PY GG+ P +A+ GG+
Sbjct: 815 PGWGAGGKTPNAFGSSATPAWQANS--RTPNPYGAGGAGGRTPNPYAAA-----GGGRTP 867
Query: 712 TPGTGGLDAMSPVIGADNEG 731
P GG +P + ++ G
Sbjct: 868 NPYAGGAGGRTPQVPRESSG 887
>gi|323507662|emb|CBQ67533.1| related to SPT5-transcription elongation protein [Sporisorium
reilianum SRZ2]
Length = 945
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 178/564 (31%), Positives = 295/564 (52%), Gaps = 44/564 (7%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK---VMLVPIREMTDVLAVES 67
+++ S D + IY+EA + V +AC GL +Y+++ + L+PI EM D+L ++
Sbjct: 227 MRVISAFCRDTIPGKIYVEARRADDVVKACNGLAGVYARQTTSLHLIPISEMADLLKLQK 286
Query: 68 KAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKK 127
++ WVR+K G Y GDLA+V+DV + V +K+IPRIDL + L + +K
Sbjct: 287 VQNEIQVGGWVRIKRGKYAGDLAQVLDVSENGEEVGLKMIPRIDLNPKDSGLYTDSLGRK 346
Query: 128 K-----------PFVPPPRFMNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGFLY 175
+ F PP RF N +E ++ + R +R F+N ++DG+L
Sbjct: 347 RKKGAGASSATVAFRPPQRFFNPEEVQKAYPRDTPTKRGSQW--VFQNDS---YRDGYLE 401
Query: 176 KTVSMKSISAQNIQPTFDELEKF--RTPGENGESDIASLS-TLFANRKK----GHFMKGD 228
K V + I +N+ PT DE+ KF + E+G + +A++ L A+ K D
Sbjct: 402 KDVRVTGIITENVNPTLDEITKFAGESSLEDGINKLAAVDLNLIADASKKATEALIQPKD 461
Query: 229 AVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGL-PKTLAVNSKELCKYFEPGNHVKVVSG 287
V + +G+ + G V+ ++ E + I+ E + L + + V ++ + K F PG+H+KV+SG
Sbjct: 462 QVEIFEGEQAGVYGTVKAINNEVITIQLEHEDLMDQIVEVPARSVRKRFSPGDHIKVMSG 521
Query: 288 TQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLD 347
A TG+V+KVE +V LSD + +++ VF+ D+ +++EV +G+ I YEL +LV LD
Sbjct: 522 KHADETGLVVKVEDNVTTFLSDLSMQEVSVFSKDIRQAAEVGSGVNVISGYELHNLVQLD 581
Query: 348 NNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE-KKSNVQDRNKNTVAVKDVV 406
+ G+I +E E+F+VL +V VK +I K + ++ DR+ N + D+V
Sbjct: 582 AQTVGIIFNIERESFKVLDQT---GQVVTVKPHQISNKKDTSRAFALDRDGNEIRAGDMV 638
Query: 407 RIVEGP-CKGKQGPVEHIYRG-ILFIHDRHHLEHAGFICAKSSSC--VVVGGSRANGDRN 462
+ V GP + +QG V HIY+ I+F+H+R + E+ G A++ + + ++
Sbjct: 639 KEVAGPFSRLRQGQVLHIYQSMIVFLHNREYTENGGVFIARARALEPLAPKSVSTKTKKD 698
Query: 463 GDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYR 522
G S+ N P + G + G R GGR H G V + GPYK YR
Sbjct: 699 GGDLSKMN-----PALSNLSGGGANDVRVEGVRRIGGRDMHR---GKNVAIIKGPYKTYR 750
Query: 523 GRVVDVKGQSVRVELESQMKVVTV 546
GR+ + G R+EL S K +TV
Sbjct: 751 GRITETTGNVARIELTSVSKPITV 774
>gi|71003211|ref|XP_756286.1| hypothetical protein UM00139.1 [Ustilago maydis 521]
gi|74704992|sp|Q4PIC4.1|SPT5_USTMA RecName: Full=Transcription elongation factor SPT5; AltName:
Full=Chromatin elongation factor SPT5
gi|46096291|gb|EAK81524.1| hypothetical protein UM00139.1 [Ustilago maydis 521]
Length = 1057
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 176/568 (30%), Positives = 292/568 (51%), Gaps = 48/568 (8%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK---VMLVPIREMTDVLAV 65
S ++I S D + +Y+EA + V +AC GL Y+++ + L+PI EM D+L +
Sbjct: 336 SPMRIISAFCRDSIPGRVYVEARRADDVVKACNGLAGAYARQTTSLHLIPISEMADLLKL 395
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVA 125
+ ++ WVR+K G Y GDLA+V+DV + V +K+IPRIDL + L +
Sbjct: 396 QKVQNEIQVGGWVRIKRGKYAGDLAQVLDVSENGEEVGLKMIPRIDLNPKDSGLYTDSLG 455
Query: 126 KKK-----------PFVPPPRFMNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGF 173
+K+ F PP RF N +E ++ + R +R F+N ++DG+
Sbjct: 456 RKRKKGAGSSATTVAFRPPQRFFNPEEVQKAYPRDTPTKRGSQW--VFQNDS---YRDGY 510
Query: 174 LYKTVSMKSISAQNIQPTFDELEKFRTPGEN---------GESDIASLSTLFANRKKGHF 224
L K V + I +N+ PT DE+ KF GE+ G D++ ++ +
Sbjct: 511 LEKDVRVTGIITENVNPTLDEITKF--AGESSIEDGINKLGAVDLSLIADASKKATEALI 568
Query: 225 MKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGL-PKTLAVNSKELCKYFEPGNHVK 283
D V + +G+ + G V+ ++ E + I+ E + L + + V ++ + K F+PG+H+K
Sbjct: 569 QPKDQVEIFEGEQAGVYGTVKAINNEVITIQLEHEDLMDQIVEVPARSVRKRFKPGDHIK 628
Query: 284 VVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDL 343
V+SG A TG+V+KVE +V LSD + +++ VF+ D+ +++EV +G+ I YEL +L
Sbjct: 629 VMSGKHADETGLVVKVEDNVTTFLSDLSMQEVSVFSKDIRQAAEVGSGVNVISGYELHNL 688
Query: 344 VLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE-KKSNVQDRNKNTVAV 402
V LD + G+I +E E+F+VL +V VK +I K + ++ D + N +
Sbjct: 689 VQLDAQTVGIIFNIERESFKVLDQT---GQVVTVKPHQISTKKDTSRAFALDHDGNEIRA 745
Query: 403 KDVVRIVEGP-CKGKQGPVEHIYRG-ILFIHDRHHLEHAGFICAKSSSC--VVVGGSRAN 458
D+V+ V GP + +QG V HIY+ ++F+H+R + E+ G A++ S +
Sbjct: 746 GDMVKEVAGPFSRLRQGQVLHIYQSMVVFLHNREYTENGGVFIARARSLEPLAPKSVSTK 805
Query: 459 GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPY 518
++G S+ N P + G + G R GGR H G V + GPY
Sbjct: 806 TKKDGGDLSKMN-----PALSNLSGGGANDVRVEGVRRFGGRDMHK---GKNVAIIKGPY 857
Query: 519 KGYRGRVVDVKGQSVRVELESQMKVVTV 546
K YRGR+ + G R+EL S K +TV
Sbjct: 858 KTYRGRITETTGNMARIELTSVSKPITV 885
>gi|66806799|ref|XP_637122.1| transcription initiation factor Spt5 [Dictyostelium discoideum AX4]
gi|60465555|gb|EAL63639.1| transcription initiation factor Spt5 [Dictyostelium discoideum AX4]
Length = 1131
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 234/760 (30%), Positives = 359/760 (47%), Gaps = 87/760 (11%)
Query: 126 KKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISA 185
K+K P RF N DE ++ I + + ++G F + G +KDGFL+K + S++
Sbjct: 407 KRKRTRPQARFFNPDEVEKMKIPLNQST-TLSG-LFYILNGDKYKDGFLHKVFRVASVNI 464
Query: 186 QNIQPTFDELEKFR-----------TPGENGESDIASLSTL-FANRKKGHFMKGDAVIVI 233
+ P+ +EL+KF+ P EN ++I+S+ L K HF KGD V VI
Sbjct: 465 DGVVPSLEELQKFQDRGEVQMDEEGQPIENISAEISSVPILPRLQTKSTHFAKGDTVKVI 524
Query: 234 KGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
+GDLKNL VE V+E+ V I P + + A EL KYF+ G+HVK + G G T
Sbjct: 525 QGDLKNLMAIVESVEEDRVLILPIDEQIKDLFAFKPYELQKYFKVGDHVKAIGGRYEGET 584
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGV 353
GMVL+V+ +++LSD T +I+V D+ E +EV TG ++G+YEL DLV + + GV
Sbjct: 585 GMVLRVDDLQVVLLSDLTMSEIKVKPQDLQECTEVATGRLELGNYELHDLVQIGPHKVGV 644
Query: 354 IIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKS-NVQDRNKNTVAVKDVVRIVEGP 412
II+VE ++F+VL + V+ VKL+E+ K KS D + NT+ D++ +V+G
Sbjct: 645 IIKVERDSFKVLD---ESSNVSTVKLQEVGNKRRNKSFTTLDAHHNTITSGDLIEVVDGA 701
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
KGKQG + HI R LFI + E+ G ++ C ++GG++ +
Sbjct: 702 YKGKQGTILHISRNFLFIKSKDIFENGGVFVVRTQYCSLLGGNKNKQSNIQQQQQQQQQQ 761
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQS 532
+ Q RGG GR RGGRG D+ + V ++ G +KGY G V +
Sbjct: 762 QQQQHSSQGGRGGGRGGYNNSGRGRGGRGREDSPLHKVVTIKKGSWKGYVGIVKECTDTM 821
Query: 533 VRVELESQMKVVTVDRSMIS----DNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTP 588
V+VEL++ K + V ++ I+ + D + S TPM P TP
Sbjct: 822 VQVELQTNSKKINVLKTDIALPNERQQMQQQQTNDWDQLYNASRTPMRED-----PSQTP 876
Query: 589 MRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSP------------- 635
MR M TP R +P++ M D + + G+
Sbjct: 877 MR----------MNTPARSSHSDPWS-MRESSDYFSSSSSSGSGSGSSSNNNSSSGGGRD 925
Query: 636 -------QYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAG-TPRDSSST---YVNAPSPY 684
Y G+ P Y +P + G N SD TP D S+ Y N P+P
Sbjct: 926 SGSHNGNDYSSGTTPGTNYSLYSPYTPNTPLDGSNRSDPNYTPYDRSTPSMGYGNDPNP- 984
Query: 685 LPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNE---GPWFMP----D 737
PS TP+ P TP P TP T P D++ P + +
Sbjct: 985 TPSYMSN--YTPHEIPSSPYTPHN-PQTPAT-------PNSSEDHDEEVEPQYWSGTKIE 1034
Query: 738 ILVRRSGEESVVGVIREVLPDGSCRV-VLGSSGNGDTITALPNEIEIVPPRKTDKIKIMG 796
++ + SG+ +VV + L D + RV +L + D ++ +++ +VPP K D++ I+
Sbjct: 1035 VVFKDSGKHAVV---LDNLSDSTVRVEMLDTKEVIDNVSQ--SQLNLVPPAKKDRVVIVK 1089
Query: 797 GPHRGATGKL-IGVDGTDGIVKVDVSLDVKILDMAILAKL 835
G G +G L I D GIVK++ + D K+ M+ + KL
Sbjct: 1090 GKLCGQSGNLFILTDENTGIVKMNSNFDFKVFKMSYIGKL 1129
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 79/111 (71%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDL 72
I+SV+A HL Y+Y+EA++E HV++A KG+ ++ S ++ P++++ +V++ K +DL
Sbjct: 164 IKSVMAPHHLSGYVYVEAEREVHVRQAIKGMTSLVSFTPVITPLKDIIEVISANKKNVDL 223
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE 123
+ WVR+++G YK D+ +++ D + RVTVKLIPR+DL ++A L+ +E
Sbjct: 224 QKGGWVRIRLGKYKADIGQIISYDPSKSRVTVKLIPRLDLPSIAQSLQEKE 274
>gi|299746351|ref|XP_001837913.2| transcription elongation factor SPT5 [Coprinopsis cinerea
okayama7#130]
gi|298407015|gb|EAU83929.2| transcription elongation factor SPT5 [Coprinopsis cinerea
okayama7#130]
Length = 1118
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 218/756 (28%), Positives = 353/756 (46%), Gaps = 78/756 (10%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K ID L I S D L IY+EA V++AC GL +Y S+ + LVPI
Sbjct: 205 MRKSIDMEYTAHPLSILSAFQRDSLPGMIYVEARSAKMVQQACNGLVGVYLSRGIHLVPI 264
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL- 115
EM +L ++ + + + TWVR++ G Y+GDLA+V+D+ + V ++ IPR+DL
Sbjct: 265 EEMASLLTIKKQDLTVQPGTWVRIRRGKYQGDLAQVMDITENGEDVGLRFIPRVDLSPRD 324
Query: 116 ------ANKLEGREVAKKKPFVPPPRFMNVDEARELHIR--VERRRDPMTGDYFENIGGM 167
A+K + PP + N +E ++ R V +R + F+N
Sbjct: 325 ENAAVDASKKRKKSAVTGGATRPPQKLFNYEEVVKVWGRKNVHKRGNTYI---FQND--- 378
Query: 168 LFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESD-IASLSTLFANRKKGH--- 223
++DGF+ K + ++ +++ PT DE+ +F E ++D + LS + KK
Sbjct: 379 TYRDGFIEKDFKLSALILEDVNPTLDEITQFMRRPEGADADSVVDLSVIAEASKKAAIAV 438
Query: 224 FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGN 280
GD V V +G+ + G V+++ E V + +++G + + + ++ + K F+PG+
Sbjct: 439 LQPGDHVEVFEGEQAGVHGIVDEIHNEIVTLTVVGADIEG--QKVEIPARSVRKRFKPGD 496
Query: 281 HVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYEL 340
HVKV+ G TG+V+ V +V+ LSD + +++ VF+ D+ E++EV G +G+YEL
Sbjct: 497 HVKVMQGQNVDETGLVVSVADNVVTFLSDMSMQEVSVFSKDLREAAEVGAGTNTVGNYEL 556
Query: 341 RDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE-KKSNVQDRNKNT 399
DLV LD + GVI + E ++F+VL + LV+ +I + + +++ D + +
Sbjct: 557 HDLVQLDAQTVGVIYKTERDSFRVLD---QNGQTRLVQPHQISMRRDTRRAIASDHHGHE 613
Query: 400 VAVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRAN 458
+ V D V+ V+G + ++G V H ++ F+H+R E+ G ++ S V + +
Sbjct: 614 LRVNDNVKEVDG--EQRKGRVLHTHQSFFAFLHNRDISENGGVFVTRARSLVSLAPKGNS 671
Query: 459 GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPY 518
+N S+ N P I Q G G GRG D +G TV V GP+
Sbjct: 672 MLKNNLDLSKMN-----PNIAQPIGGMV-------GSGAMGRGPRDRHIGLTVMVVKGPH 719
Query: 519 KGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPS 578
KGY G + D G RVEL + KV+TVD+ D + P D Y + P +
Sbjct: 720 KGYAGTIKDTNGNIARVELRTGNKVITVDK----DKLRKMGP--DKKLYQLNDHAPAGAN 773
Query: 579 RTPLHPYMTPMRDAGATPIHDGMRTPM--RDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQ 636
+ + P G+ G RTP + NPY DG +W S +
Sbjct: 774 NS---SWGAPPAWTGSGAAASGGRTPFGGSSKTPNPYAV--------GDGRTPAWSASSR 822
Query: 637 YQPGSPPSRAYEAPTPGSGWASTPGGNYSDAG-TPRDSSSTYVNAPSPYLPSTPGGQPMT 695
+P A TP +S Y+D G TP + S+ P+PY G T
Sbjct: 823 ----TPNPYAEGHKTPAWNASSRTPNPYADGGRTPAWNVSS--RTPNPYATGANAGS-AT 875
Query: 696 PNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEG 731
P S+ TPG P GG P G + G
Sbjct: 876 PGRPSFGGATPG----RPAFGGATPARPSWGDSSWG 907
>gi|388500916|gb|AFK38524.1| unknown [Lotus japonicus]
Length = 197
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 140/180 (77%), Positives = 156/180 (86%), Gaps = 3/180 (1%)
Query: 391 NVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCV 450
+VQD+ KNTV+ KDVVRIVEGPC+GKQGPVEHIYR ILFI DRHHLEHAGFICAK+ SCV
Sbjct: 2 SVQDKLKNTVSSKDVVRIVEGPCRGKQGPVEHIYRRILFIFDRHHLEHAGFICAKAQSCV 61
Query: 451 VVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGP--PAGGRNRGGRGGHDALVG 508
VVGGSR++GDRNGDAYS+ ++ RTPP IP SP R+ RGG +GGR+RGGRGGHD L G
Sbjct: 62 VVGGSRSSGDRNGDAYSKLSAFRTPPPIPDSPKRFPRGGRGFDSGGRHRGGRGGHDGLSG 121
Query: 509 TTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYG 568
TTVKVR GPYKGYRGRV++VKG VRVELESQMKVVTVDR+ ISDNV V TPYRDT RYG
Sbjct: 122 TTVKVRQGPYKGYRGRVIEVKGAMVRVELESQMKVVTVDRNHISDNVAV-TPYRDTTRYG 180
>gi|358334899|dbj|GAA53311.1| transcription elongation factor SPT5, partial [Clonorchis sinensis]
Length = 809
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 206/649 (31%), Positives = 315/649 (48%), Gaps = 75/649 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI-YSQ-KVMLVPIREMTDVLAVESK 68
LQI+S A + LK YIY+EA K+ HVK+A +G+ + SQ K LVPI EMT+V+ V +
Sbjct: 193 LQIKSAFAKEGLKGYIYVEAFKQTHVKQAIEGITALRLSQYKQQLVPISEMTEVMRVVKE 252
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE--VAK 126
+ L D WVR+K G Y+ DLA V V++ + V++KLIPRID ++ E K
Sbjct: 253 SGQLKADQWVRVKSGLYRDDLALVEYVEDAQNLVSLKLIPRIDYDRRRSRATAEEEDSNK 312
Query: 127 KKPFVPPPRFMNV-DEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISA 185
+ F PP+ + ++A + R++R G + G DGFL+K + ++ +
Sbjct: 313 TQRFKRPPQALFAPNKALD---RIQR-----DGSWTIFEGNRYDSDGFLHKQFRISAVVS 364
Query: 186 QNIQPTFDELEKFRTPGENGESDIASLSTL-------FANRKKGH-FMKGDAVIVIKGDL 237
+ I+PT ELE+F ++ + + + + + H F GD V V +GDL
Sbjct: 365 EGIRPTLAELERFHQTPDSLQLAAVAATAVAAAGNVPVTDSTITHCFTPGDVVEVCEGDL 424
Query: 238 KNLKGWVEKVDEEN-VHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
KNL+G V ++ N + ++P L + + EL K+F G+HVKV+SG TG+V
Sbjct: 425 KNLRGRVVSIEGNNRIVVQPNHSDLHEPIPFTPVELRKFFNQGDHVKVLSGRHVNQTGLV 484
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
++ E + ++LSD + +++V D+ + + + G ++ DLV +D + GV++
Sbjct: 485 IRFEPSLAVVLSDHSMNEMKVAPKDLRLWQDRASTLDSSGHVQMMDLVQVDPQTVGVVVN 544
Query: 357 VESEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP 412
VE E VL K V + A LR + + + + DRN N + VK VR++E P
Sbjct: 545 VEPEQVSVLTCFGKVVNLKSNTA---LRRLNTQRRRPAQAMDRNGNLIQVKQTVRLLEKP 601
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
G G V+H+YR FI+ R HLE+AG + A++ V+ NS
Sbjct: 602 HCGLIGEVKHLYRSWAFIYSRTHLENAGLVVAQTRQLAVL-----------------NST 644
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNRG----GRGGHD----ALVGTTVKVRLGPYKGYRGR 524
+ P ++ + P G RN G GRG D L+G T ++ G KG G
Sbjct: 645 QNAPEQQKAVNDFRTITPLNGARNVGFEHDGRGRGDRMERKLIGRTARIVKGTLKGLLGI 704
Query: 525 VVDVKGQSVRVELESQMKVVTVDRS----MISDNVVVSTPY-RDTPRYGMGSETPMHPSR 579
+ D V +EL SQ K V V R + S ++ T Y TPR TPM R
Sbjct: 705 ICDATPTHVVLELHSQFKKVPVARENMALLDSGGRIMDTQYGATTPRV-----TPMREMR 759
Query: 580 TPLHPY---------MTPMRDAGATP--IHDGMRTPMRDRAWNPYTPMS 617
TP Y TP D+ P + G+ TP +P TP S
Sbjct: 760 TPQLAYGAQTPHAASTTPRGDSTPLPSAFNAGLATPKLSNLDDPMTPNS 808
>gi|67678018|gb|AAH97843.1| LOC733281 protein [Xenopus laevis]
Length = 610
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 202/617 (32%), Positives = 306/617 (49%), Gaps = 71/617 (11%)
Query: 279 GNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDY 338
G+HVKV++G G TG++++VE++ +I+ SD T +++V D+ SE +G+ G +
Sbjct: 3 GDHVKVIAGRYEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQH 62
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNK 397
E +LV LD + GVI+R+E E FQVL +V V+ + + K + + V D
Sbjct: 63 EWGELVQLDPQTMGVIVRLERETFQVLNM---HGKVVTVRHQAVNRKKDNRFAVALDSED 119
Query: 398 NTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRA 457
N + VKD+V++++GP G++G + H++R F+H + +E+ G K+ V+ GGS+
Sbjct: 120 NNIHVKDIVKVIDGPHSGREGEIRHLFRNYAFLHCKKLVENGGMFVCKTRYLVLAGGSKP 179
Query: 458 NGDRNGD--AYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRL 515
N ++ + + P P G GG GR +D L+G TV++
Sbjct: 180 RDVTNFTVGGFAPMSPRISSPMHPSGGGPRGGGGGGGAAGRGRGRRDND-LIGQTVRISQ 238
Query: 516 GPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS------------MISDNVVVSTPYRD 563
GPYKGY G V D + RVEL S + ++VDR M S +V
Sbjct: 239 GPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGARRSGGMTSTHVRTPIYGSQ 298
Query: 564 TPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR--- 620
TP YG GS TPM+ S+TPLH TP+HDG RTP + AW+P P +P R
Sbjct: 299 TPMYGTGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRADE 358
Query: 621 ------DNWEDGNPGSWGTSPQYQ-PGSP--PSRAYEAP----TPGSG-----------W 656
D+ +P +G +P Q PG P PS AP TPG+
Sbjct: 359 EYDYRYDDEPSPSPQGYGGTPNPQTPGYPDVPSPQVNAPYHPQTPGTPAMYNTDQFSPYA 418
Query: 657 ASTPGGNYSDAGTPRDSSSTYVNAPSP------YLPST--PGGQPMTPNSASYLPGTPGG 708
A +P G+Y + +P+ S + APSP + P++ P PM AS P G
Sbjct: 419 APSPQGSYQPSPSPQ---SYHQVAPSPVGYQNTHSPASYHPTPSPMA-YQASPSPSPMGY 474
Query: 709 QPMTPGT---GGLDAMSPVIGADN-EGPWFMPDIL--VRRSGEESVV----GVIREVLPD 758
PMTPG GG + +P + W DI VR + ++S V G++R V
Sbjct: 475 SPMTPGAPSPGGYNPHTPGSSIEQISSDWVTTDIQVKVRDTFQDSQVIGQTGIVRSVT-G 533
Query: 759 GSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKV 818
G C V+L S +I+ + +E V P K ++K++ G R ATG L+ +D DGIV++
Sbjct: 534 GLCSVLLQDSEKVISISG--DHLEPVTPTKNSRVKVILGEDREATGVLLSIDNEDGIVRM 591
Query: 819 DVSLDVKILDMAILAKL 835
D+ +KIL++ L KL
Sbjct: 592 DLEEQLKILNLHFLGKL 608
>gi|388852452|emb|CCF53854.1| related to SPT5-transcription elongation protein [Ustilago hordei]
Length = 955
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 175/567 (30%), Positives = 290/567 (51%), Gaps = 47/567 (8%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK---VMLVPIREMTDVLAV 65
S ++I S D + IY+EA + V + C GL +Y+++ + L+PI EM D+L +
Sbjct: 227 SPMRIISAFCRDTIPGRIYVEARRADDVVKTCNGLAGVYARQTTSLHLIPISEMADLLKL 286
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVA 125
+ ++ WVR+K G Y GDLA+V+DV + V +K+IPRIDL + L +
Sbjct: 287 QKVQNEIQVGGWVRIKRGKYAGDLAQVLDVSENGEEVGLKMIPRIDLNPKDSGLYTDSLG 346
Query: 126 KKK-----------PFVPPPRFMNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGF 173
+K+ F PP RF +E ++ + + +R F+N ++DG+
Sbjct: 347 RKRKKGAGSSATTVAFRPPQRFFYPEEVQKAYPKDTPTKRGSQW--VFQNDS---YRDGY 401
Query: 174 LYKTVSMKSISAQNIQPTFDELEKFRTPGEN--------GESDIASLSTLFANRKKGHFM 225
L K V + I +N+ PT DE+ KF GE+ G D++ ++ +
Sbjct: 402 LEKDVRVTGIITENVNPTLDEITKF--AGESSVEDGMKLGAVDLSLIADASKKATEALIQ 459
Query: 226 KGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGL-PKTLAVNSKELCKYFEPGNHVKV 284
D V + +G+ + G V+ ++ E + I+ E + L + + V ++ + K F+PG+H+KV
Sbjct: 460 PKDQVEIFEGEQAGVYGTVKAINNEVITIQLEHEDLMDQIVEVPARSVRKRFKPGDHIKV 519
Query: 285 VSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLV 344
+SG A TG+V+KVE +V LSD + +++ VF+ D+ +++EV +G+ I YEL +LV
Sbjct: 520 MSGKHADETGLVVKVEDNVTTFLSDLSMQEVSVFSKDIRQAAEVGSGVNVISGYELHNLV 579
Query: 345 LLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE-KKSNVQDRNKNTVAVK 403
LD + G+I +E E+F+VL +V VK +I K + ++ D + N V
Sbjct: 580 QLDAQTVGIIFNIERESFKVLDQT---GQVVTVKPHQISTKKDTSRAFALDHDGNEVRAG 636
Query: 404 DVVRIVEGP-CKGKQGPVEHIYRG-ILFIHDRHHLEHAGFICAKSSSC--VVVGGSRANG 459
D+V+ V GP + +QG V HIY+ I+F+H+R + E+ G A++ + +
Sbjct: 637 DMVKEVAGPFSRMRQGQVLHIYQSMIVFLHNREYTENGGVFIARARTLEPLAPKSVSTKT 696
Query: 460 DRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYK 519
+ G S+ N P + G + G R GGR H G V + GPYK
Sbjct: 697 KKEGGDLSKMN-----PALSNLSGGGANDVRVEGVRRLGGRDMHK---GKNVAIIKGPYK 748
Query: 520 GYRGRVVDVKGQSVRVELESQMKVVTV 546
YRGR+ + G R+EL S K +TV
Sbjct: 749 TYRGRITETTGNMARIELTSVSKPITV 775
>gi|403178221|ref|XP_003336662.2| hypothetical protein PGTG_18458 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164061|gb|EFP92243.2| hypothetical protein PGTG_18458 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1340
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 172/570 (30%), Positives = 282/570 (49%), Gaps = 49/570 (8%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKA 69
+L I S D LK YIY+EA E+ V+EA +G +Y + +VP+ EM D+L + +
Sbjct: 321 QLNIISAFYRDSLKGYIYVEARLESDVREAIQGFVGVYKSEFRMVPMDEMPDLLRTKKRE 380
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE-GREVAKKK 128
+ WVR+K G Y GDLA+V +V V ++ +PRIDL + ++ G + K+K
Sbjct: 381 TPIVPGGWVRIKRGKYNGDLAQVTEVLENGDEVGLRFVPRIDLNPKEDGVKVGPDGKKRK 440
Query: 129 ---------PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
F PP + N +E ++ + + R G F G LF++G++ K +
Sbjct: 441 KGNTTSGGIAFRPPQKLFNAEEVKKAYKPGDVTRSQRGGYSFH---GDLFREGYIEKDLK 497
Query: 180 MKSISAQNIQPTFDELEKFR-TPGENGESDIASLSTLFANRKKGH---FMKGDAVIVIKG 235
+ ++ ++ P DE+ KF P ++ S +LS + KK GD + V +G
Sbjct: 498 ISALEIVDVNPRIDEIAKFLGDPSDSDPSRTLNLSQIAELTKKAGTAVLQPGDHIEVFEG 557
Query: 236 DLKNLKGWVEKVDEENVHI------RPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ 289
D K ++G VE +++ENV+I P++KG + + + L K F+PG+HVKV++G
Sbjct: 558 DQKGIQGTVESIEKENVNILPDPLAHPDLKG--AKIEIPASSLRKSFKPGDHVKVMAGQN 615
Query: 290 AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNN 349
TG+V++V + V+ LSD + +++ FA D+ ++EV + G +EL DLV LD
Sbjct: 616 TDETGLVIRVREDVVTFLSDLSCKEVESFARDLRVAAEVGSSANTFGQFELYDLVQLDPQ 675
Query: 350 SFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVV-- 406
+ GVI ++E F+V+ V VK +I K + K + D + +AV D +
Sbjct: 676 TTGVIFKIERNTFKVID---QNGNVRSVKPNQISAKKDSKYAIATDADGYEIAVNDQMKE 732
Query: 407 RIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDA 465
+ V G G+ G V HIYR + F+H E+ G + + V V + D G
Sbjct: 733 KSVGGRTDGRAGRVLHIYRSMYAFLHSHDTTENGGVFVTNARNLVSVAPKGSKKDSGGLD 792
Query: 466 YSRFNSLRTPPRIPQSPGRYSRGGPPAGG----RNRGGRGGHDALVGTTVKVRLGPYKGY 521
++ N P+ R PP GG G R D +G + GP KG
Sbjct: 793 LTKMN--------PEMANR-----PPVGGAMVAAGLGQRFKRDEDIGKLCYIIKGPNKGL 839
Query: 522 RGRVVDVKGQSVRVELESQMKVVTVDRSMI 551
+G + D+ G RVEL + K +T++++ +
Sbjct: 840 QGIIKDINGLLARVELHTNNKTLTIEKTKL 869
>gi|430812601|emb|CCJ30007.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 902
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 218/748 (29%), Positives = 350/748 (46%), Gaps = 82/748 (10%)
Query: 1 MQKCID-KGSE--LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M+K ID + SE ++I SV D ++ YIY+EA K+AH+ ACK + +IY+ +++LVP++
Sbjct: 182 MRKTIDLQHSETPVEIISVFQRDGIEGYIYVEAKKQAHIIHACKDIVSIYTSRIILVPVK 241
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
EM D+L ++ + + L +VR+K G Y GDLA++ ++ VK+IPR+D
Sbjct: 242 EMPDLLKIKKETLKLIPGAYVRIKRGKYTGDLAQIDNISENGMSARVKIIPRLDYSTKDK 301
Query: 118 KLEGREVAKKKPF--------VPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF 169
+ KK + PP F + EA + + F N +
Sbjct: 302 GSTFVGLDTKKRYHNGFSTVSRPPQCFFSEKEAAKSSGNKSLTKRGAKSYIFNNDE---Y 358
Query: 170 KDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGE-NGESDIASLS-TLFANRKKGHFMKG 227
++G+L K + + + + + PT +E+ KF + E N D+ SL+ ++ + F G
Sbjct: 359 ENGYLMKDIKLTGLVIEGVNPTLEEITKFNSGLEDNHNFDLTSLAQSIKTSNVTSVFQPG 418
Query: 228 DAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVS 286
D V V++G+ + G VE ++ E + E +GL + + ++SK L K F+ G+++KVV+
Sbjct: 419 DHVEVLEGEQAGVHGIVEAINNEIITFYSEHEGLKGERIEISSKGLKKRFKQGDNIKVVN 478
Query: 287 GTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL 346
G G TGMV+ V+ +++LSD + +I VF+ D+ E+++ T +Y L DLV L
Sbjct: 479 GKYKGDTGMVICVKDDQVVLLSDFSMTEITVFSKDISEATQSTGTNVASNEYNLHDLVQL 538
Query: 347 DNNSFGVIIRVESEAFQVLKGVPDRPEVALVKL-REIKCKLEKKSNVQ-DRNKNTVAVKD 404
D N+ II++E F+VL D+ ++ L +I K + K++V D+N + V D
Sbjct: 539 DANTVACIIKMEGNLFRVL----DQNGLSRTILPSQISMKHQSKNSVSTDKNGLEIHVGD 594
Query: 405 VVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD 464
VR ++ + K V HI F++DR E+ G K+ + + +G
Sbjct: 595 TVRDIDD--RNKPWTVIHIIHQYAFLYDREVNENNGVFVTKTKNLATITAKGGRITSSGP 652
Query: 465 AYSRFNSLRTPPRIP--QSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYR 522
+R N P I S R+S G D +G TV + LGPYKG
Sbjct: 653 DLNRMNPALQRPTISSIHSIPRFS---------------GRDKAIGETVHICLGPYKGLV 697
Query: 523 GRVVDVKGQSVRVELESQMKVVTVDRS------------MISDNVVVSTPYRDTPRYGMG 570
G V D S RVEL S K +T+D++ M + S R+
Sbjct: 698 GIVKDTTETSARVELHSTQKTITIDKNKLGFKNRYTGKMMSYFEFITSKGGRNNKFDTQN 757
Query: 571 SETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGS 630
S + SR+ + + ++ A ++ G TP +W T M P W N GS
Sbjct: 758 SSLAYNQSRSNIPVWAQSSKNKIAPWVNSGSATP----SW-ANTGMQTPA--W--SNSGS 808
Query: 631 WGTSPQYQPGSPPSRAYE-APTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTP 689
+P + S + AY A TP + TP YS + TP S S +TP
Sbjct: 809 --KTPIWSTTSSQTPAYNRARTPAYSGSKTPA--YSGSKTPAASGS-----------ATP 853
Query: 690 GGQPMTPNSASYLPGTPGGQPMTPGTGG 717
G + N+ S TPG MTP G
Sbjct: 854 GYESSVWNTGS---KTPGYSSMTPAYIG 878
>gi|334321718|ref|XP_001380634.2| PREDICTED: transcription elongation factor SPT5-like [Monodelphis
domestica]
Length = 930
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 187/607 (30%), Positives = 297/607 (48%), Gaps = 50/607 (8%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVML-----VPIREMTDVL 63
S L I+S +A ++LK YIY+EA K +HV +A +GL ++ ++ VPIREMTDVL
Sbjct: 315 SPLLIKSAVAPENLKGYIYVEAYKASHVLQAIEGLVSLRQGRLQQQQQQQVPIREMTDVL 374
Query: 64 AVESK-AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGR 122
V SK L +WVR++ G Y+GDLA+V V+ + V++KLIPRID LA +
Sbjct: 375 KVLSKEGPSLQPKSWVRVRTGLYRGDLAQVSRVEPDQSSVSLKLIPRIDYGLLAGGQQPP 434
Query: 123 EVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKS 182
E K+ + +A + IR R GD+ G GFL KT+S+
Sbjct: 435 EGLAKRRRFQRRPPQQLLDAHK--IRSLGGRLTFDGDFLVFGGNRYSPRGFLLKTLSVSR 492
Query: 183 ISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKG 242
+ + ++PT EL++F E E+ A + + F GD V V G+L +L+G
Sbjct: 493 VLREGVKPTLAELQQFE---ERPEALQALQLAAEDSSAEQSFRPGDKVEVSGGELVHLRG 549
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
V V V + P+ + L + LA + EL K+FE G+H +VVSG G +G VL+ E
Sbjct: 550 RVVSVQGPLVRMLPQHEMLREVLAFPACELRKHFEVGDHAQVVSGRSRGKSGFVLRAEAA 609
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
+++ D KE++RV D + +G+ +L+ +G ++++ S
Sbjct: 610 FVLLFCDLNKEELRVLPRD----------LQLLGNTAPALDLLMQQQRWGQLVQLPSNTV 659
Query: 363 QVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAV-----------KDVVRIVEG 411
+ G+ D ++ + + K +L + V DR N +AV + +VR++EG
Sbjct: 660 GIFVGLDDADTCRVLDM-QGKLQLVRSQAVADRKHNPLAVALDSGQNELRPRALVRVLEG 718
Query: 412 PCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNS 471
P G + + H++RG+ F+H + ++H G K+ ++ RA ++ +
Sbjct: 719 PHSGLEACILHLFRGVAFLHSKKIMDHGGLFVCKTRHLLLSEAGRAPWAKDLPSRDLALG 778
Query: 472 LRTP-PRIPQSPGRYSRGGPPAGGRNRGGRGGH----DALVGTTVKVRLGPYKGYRGRVV 526
R+P P + PG + PA GR G G + LVG TV++ GPYKGY G V
Sbjct: 779 ARSPAPITARPPGAPAGPRDPALGRAAGAGPGQGRRVNDLVGQTVRICQGPYKGYMGMVK 838
Query: 527 DVKGQSVRVELESQMKVVTVDRSMI------SDNVVVSTPY------RDTPRYGMGSETP 574
+ RVEL + + ++V + S STP+ TP Y +GS TP
Sbjct: 839 EATDSVARVELHTTCQTISVQSQRLVRLGTPSSQSRDSTPHATPSYGSQTPIYNLGSFTP 898
Query: 575 MHPSRTP 581
++ RTP
Sbjct: 899 LYGCRTP 905
>gi|443923701|gb|ELU42866.1| transcription elongation factor SPT5 [Rhizoctonia solani AG-1 IA]
Length = 1178
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 238/810 (29%), Positives = 360/810 (44%), Gaps = 116/810 (14%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K +DK + L+I S D L IY+EA V A GL Y S + LVPI
Sbjct: 196 MRKYMDKEHTNNPLEIFSAFQRDSLPGLIYVEAHDAKQVSTALNGLVGAYVSSGIKLVPI 255
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL---- 112
EM+ +L ++ + WVR+K G Y GDLA+V+DV + V +K IPRIDL
Sbjct: 256 DEMSSLLKIKRVETTVQPGAWVRIKRGKYAGDLAQVIDVTENGEEVGLKFIPRIDLTPRD 315
Query: 113 QALANKLEGREVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGG 166
A+ ++ + +KKP + PP RF NV+E + + R F N
Sbjct: 316 DAMGGGVDPKTGKRKKPGMSIPTGRPPQRFFNVEEVTKAYGPRSVGRRQANAYVFMND-- 373
Query: 167 MLFKDGFLYKTVSMKSISAQNIQPTFDELEKF-RTPGENGESDIASLSTLFANRKKGH-- 223
+KDGF+ K + + I NI PT DE+ +F R GE+G LS + +K
Sbjct: 374 -TYKDGFIEKDIRLSGIQTDNINPTLDEIAQFARIHGEDGAPGDVDLSAIAEASRKAATA 432
Query: 224 -FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP---EMKGLPKTLAVNSKELCKYFEPG 279
GD V V +G+ + G VE + E V +R +++G + + V ++ + K F+ G
Sbjct: 433 VLQPGDHVEVFEGEQTGVHGVVESISGEIVLLRATHIDIEG--QKIEVPARSVRKRFKAG 490
Query: 280 NHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYE 339
+HVKV++G TG+V+ V +V+ LSD + +++ VF+ D+ E++EV +G+YE
Sbjct: 491 DHVKVMAGKNTDETGLVVSVTNNVVTFLSDLSLQEVTVFSKDLREAAEVGASTNTVGNYE 550
Query: 340 LRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKN 398
L DLVLL +S GVI + E F+VL + +V+ +I + + + D + +
Sbjct: 551 LHDLVLLGADSVGVIYKTEHSTFRVLD---QNGQTRIVQPHQITLRRDSNRAIATDAHGH 607
Query: 399 TVAVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRA 457
+ V+D ++ V+G ++G V HI++ F+ +R E+ G ++ S V V
Sbjct: 608 EIRVRDNMKEVDGEM--RKGQVLHIHQSTYAFLFNREIAENGGVFVTRARSLVSVA---P 662
Query: 458 NGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGP 517
G G S+ N P G +G R R D L+G V V G
Sbjct: 663 KGPGAGMDLSKMN-----------PAMMGGGMVGSGIMTRAPR---DRLIGVHVMVTKGL 708
Query: 518 YKGYRGRVVDVKGQSVRVELESQMKVVTVDRSM------------ISDNVV--------- 556
KGY G V + G VRVEL + KV+++++ ISD
Sbjct: 709 QKGYVGTVKETNGNLVRVELVTGNKVISIEKDKLRMKGPDGKYIPISDGFSRRNNASNMG 768
Query: 557 -----------------------VSTPYRDTPRYGMGSETP---MHPSRTPLHPYMTPMR 590
++P R Y GS TP SRTP TP+
Sbjct: 769 PPTSTPNSGANSGWGTPSGRGGGAASPGRTQNPYLAGSRTPGWGGDGSRTPFGGGKTPVW 828
Query: 591 DAGATPIHD----GMRTPMRDRAWN-PYTPMSPPRDNWEDGNP------GSWGTSPQYQP 639
++ ATP+H G +TP A N + +P R W P G WG + +
Sbjct: 829 NSSATPMHQSGSFGGKTPGGAGATNGSWGGATPGRSTWGGATPGRPSGQGGWGGATPAR- 887
Query: 640 GSPPSRAYEAPTPGSGW-ASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNS 698
+P A A + G+ W +TP N G +A +PY TPG M+ +
Sbjct: 888 STPWGGATPARSSGNAWGGATPAANKDSWGGATPGRPNGGSAETPYTAPTPGAGLMSAPT 947
Query: 699 ASYLPGTPGGQPMTPGTGGL-DAMSPVIGA 727
PG P P TPG G A +P G+
Sbjct: 948 ----PGAPLSAP-TPGAGAFSSAPTPAFGS 972
>gi|159125111|gb|EDP50228.1| transcription initiation protein spt5 [Aspergillus fumigatus A1163]
Length = 1058
Score = 242 bits (618), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 231/777 (29%), Positives = 375/777 (48%), Gaps = 80/777 (10%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ GS IR + A + + YIY+EA ++A V EA + + N+Y + K++L
Sbjct: 260 IQKRIEERPPGSRKPIRIISAFERGGAMSGYIYVEARRQADVMEALEDMSNVYPRTKMIL 319
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP+REM D+L V+ K+ +L+ WVR+K G Y+GDLA++ +VD VTV+L+PR+D
Sbjct: 320 VPVREMPDLLRVQ-KSEELNPGGWVRIKRGKYQGDLAQIEEVDTNGLDVTVRLVPRLDYG 378
Query: 114 ALANKLEGR---EVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENI 164
N+ G ++ +K+P + PP R + EA++ H + + G + +
Sbjct: 379 L--NEDSGAPVVDIKRKRPGMASGGPRPPQRLFSEAEAKKRHGKYLSATSGLGGKSWSYL 436
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKK 221
G + DGFL K + ++ + +N+ P +E+ F ++G S D+ASL+ TL + +
Sbjct: 437 G-ETYIDGFLIKDMKVQHLITKNVNPRLEEVTMFARGSDDGTSNLDLASLAETLKNSTAE 495
Query: 222 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEP 278
++ GD V V +G+ + L G + V ++ E+ G + + K L K F
Sbjct: 496 ESYLPGDPVEVFRGEQQGLVGRTTSTRGDIVTLQVTEGELAG--QMIEAPVKSLRKRFRE 553
Query: 279 GNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIG 336
G+HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+ S+E TG+ K+G
Sbjct: 554 GDHVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLRLSAE--TGVDGKLG 611
Query: 337 DYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QD 394
+++ DLV LD ++ +++V+ E+ +VL + V +I K+ + + D
Sbjct: 612 MFDVHDLVQLDASTVACVVKVDRESLRVLD---QNGSIRTVLPSQIANKITPRRDAVATD 668
Query: 395 RNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
RN + + D VR + G + G + HIYR LF+H++ E++G + ++++ V V
Sbjct: 669 RNGAEIRIGDTVRELYG--DQRSGVILHIYRSFLFLHNKAQAENSGIVVVRTTNVVTV-- 724
Query: 455 SRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVR 514
S G G ++ N IP + GPP GHD L+G TV+VR
Sbjct: 725 SAKGGRSTGPDLTKMNPALMRSGIPGA-----SMGPPKSF-------GHDRLIGKTVQVR 772
Query: 515 LGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETP 574
GPYKG G V D RVEL S+ K+VT+ + ++ V+ D R G G P
Sbjct: 773 KGPYKGLVGIVKDSTDVQARVELHSRNKLVTIPKDVLIVKDPVTGQTLDMSRKG-GQRVP 831
Query: 575 MHPSRTPLHPY---MTPM--RDAGATPIHDG---MRTPM-------RDRAWN-PYTPMSP 618
S P + TPM D+ TP G RTP R AW + S
Sbjct: 832 YGASAAPPSGWSGGRTPMAAADSSRTPAWGGASSARTPAWAGISGSRTPAWKMDGSRTSN 891
Query: 619 PRDNWEDGNPGSWGTSPQYQPGS-------PPSRAYEAPTPGS---GWASTPGGNYSDAG 668
P D G+ +P + G+ S ++A GS W G + A
Sbjct: 892 PYDGSRTAYGGAGSRTPAWNAGARTPYDSGSGSSGFDAFAAGSRTPAWGGANAGGRTPAW 951
Query: 669 TPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVI 725
+ S+ + Y TPGG P +Y TPG TPG A +P +
Sbjct: 952 SASSSAGSGNRDSRGYDAPTPGGAYSAPTPGAYTAPTPGASAPTPGAWADSAPTPGV 1008
>gi|19114103|ref|NP_593191.1| transcription elongation factor Spt5 [Schizosaccharomyces pombe
972h-]
gi|74581925|sp|O13936.1|SPT5_SCHPO RecName: Full=Transcription elongation factor spt5; AltName:
Full=Chromatin elongation factor spt5
gi|2465160|emb|CAB16890.1| transcription elongation factor Spt5 [Schizosaccharomyces pombe]
Length = 990
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 228/773 (29%), Positives = 356/773 (46%), Gaps = 109/773 (14%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M+K +D S L+I S D L YIY+EA K++HV +A G+ N+Y+ ++LVPI+
Sbjct: 260 MRKAMDLQYTSSPLEIISAFQRDSLVGYIYVEARKQSHVLDALNGVLNVYTNNMILVPIK 319
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
EM D+L V+ + ++L +VR++ G Y GDLA+V ++ V+++PRID ++
Sbjct: 320 EMPDLLKVQKQVVELLPGAYVRIRRGKYAGDLAQVDNLSENGLTARVRIVPRID---YSD 376
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
L+ + A + P R N EA + + +R P F N F+DGFL K
Sbjct: 377 GLKRKNSATR----PQARLFNESEAFKSNPSKFSKRGPRLF-LFNN---EEFEDGFLVKD 428
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH--FMKGDAVIVIKG 235
+ + S+ + + PT DE+ KF N ++ LS+L + K GH F GD V V G
Sbjct: 429 IRISSLITEGVNPTLDEVSKF-----NPNNEDLDLSSLALSVKGGHAEFQPGDHVEVYVG 483
Query: 236 DLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
+ + G VE V +V GL L V S+ L K F G++VKV++G TGM
Sbjct: 484 EQTGVSGVVENV-RGSVITMVSSDGL--RLDVPSRGLRKRFRHGDYVKVIAGKYKDDTGM 540
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
V+++ + + LSDT ++ VF+ D+ E+S + YEL DLV LD N+ I
Sbjct: 541 VVRISKDEVTFLSDTLMTELTVFSRDLGEASSAQAVNSA---YELHDLVQLDVNTVACIF 597
Query: 356 RVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV-QDRNKNTVAVKDVVRIVEGPCK 414
V+ + ++V + V V +I + + V DRN + + D V+ V G +
Sbjct: 598 SVDRDTYKV---IDQNGGVRTVLASQITMRHSNRRGVATDRNGAEIRIGDKVKEVGG--E 652
Query: 415 GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT 474
GKQG + HIYR +F+H+R E+ G A+S + + A G R ++ N
Sbjct: 653 GKQGTILHIYRAFVFLHNRDIAENNGVFSARSRNVATIA---AKGARISADLTKMN---- 705
Query: 475 PPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
P + P PP R G D +G TV++R GP KG G + D + R
Sbjct: 706 -PALSNGPAL-----PPVANLKR--TIGRDKAIGATVRIRRGPMKGLLGVIKDTTDANAR 757
Query: 535 VELESQMKVVTVDRSMI-----SDNVVVSTPYRD-----------------TPRYGMGSE 572
VEL + K+VT+ + + + ++ T + + P + G+
Sbjct: 758 VELHTGNKMVTIPKENLLYTTKTGELISYTEFIERSRGIRPGSISTADGPNVPNWAQGAR 817
Query: 573 TP--MHPSRTPLHPY--MTPMRDAGA-TPI-HDGMRTPMRDR-----AWN-----PYTPM 616
TP + SRTP TP ++G+ TP + G RTP + AWN P
Sbjct: 818 TPAVANGSRTPAWNTGSRTPAWNSGSKTPAWNSGSRTPAWNSGNKTPAWNAGSRTPAWNS 877
Query: 617 SPPRDNWEDGNPG-SWGT---SPQYQPG-----------SPPSRAYEAPTPGSG----WA 657
W GN +W + +P + G +P A + P +G W
Sbjct: 878 GNKTPAWNVGNKTPAWNSGAKTPAWNAGNKTPSWNNGTKTPAWNANQTPMVANGTNTSWG 937
Query: 658 STPG-GNYSDAGTPRDSSSTYVNAPSP--YLPSTPGG-QPMTPNSASYLPGTP 706
TP G +S+ + +S AP+P + TPGG +S Y+P +P
Sbjct: 938 QTPAYGGFSETNWDTEDNSKPYTAPTPGAWAAPTPGGWDDEEGDSPKYVPPSP 990
>gi|70994272|ref|XP_751976.1| transcription initiation protein spt5 [Aspergillus fumigatus Af293]
gi|74671343|sp|Q4WP96.1|SPT5_ASPFU RecName: Full=Transcription elongation factor spt5; AltName:
Full=Chromatin elongation factor spt5
gi|66849610|gb|EAL89938.1| transcription initiation protein spt5 [Aspergillus fumigatus Af293]
Length = 1058
Score = 240 bits (613), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 230/777 (29%), Positives = 374/777 (48%), Gaps = 80/777 (10%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ GS IR + A + + YIY+EA ++A V EA + + N+Y + K++L
Sbjct: 260 IQKRIEERPPGSRKPIRIISAFERGGAMSGYIYVEARRQADVMEALEDMSNVYPRTKMIL 319
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP+REM D+L V+ K+ +L+ WVR+K G Y+GDLA++ +VD VTV+L+PR+D
Sbjct: 320 VPVREMPDLLRVQ-KSEELNPGGWVRIKRGKYQGDLAQIEEVDTNGLDVTVRLVPRLDYG 378
Query: 114 ALANKLEGR---EVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENI 164
N+ G ++ +K+P + PP R + EA++ H + + G + +
Sbjct: 379 L--NEDSGAPVVDIKRKRPGMASGGPRPPQRLFSEAEAKKRHGKYLSATSGLGGKSWSYL 436
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKK 221
G + DGFL K + ++ + +N+ P +E+ F ++G S D+ASL+ TL + +
Sbjct: 437 G-ETYIDGFLIKDMKVQHLITKNVNPRLEEVTMFARGSDDGTSNLDLASLAETLKNSTAE 495
Query: 222 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEP 278
++ GD V V +G+ + L G + V ++ E+ G + + K L K F
Sbjct: 496 ESYLPGDPVEVFRGEQQGLVGRTTSTRGDIVTLQVTEGELAG--QMIEAPVKSLRKRFRE 553
Query: 279 GNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIG 336
G+HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+ S+E TG+ K+G
Sbjct: 554 GDHVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLRLSAE--TGVDGKLG 611
Query: 337 DYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QD 394
+++ DLV LD ++ +++V+ E+ +VL + V +I K+ + + D
Sbjct: 612 MFDVHDLVQLDASTVACVVKVDRESLRVLD---QNGSIRTVLPSQIANKITPRRDAVATD 668
Query: 395 RNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
RN + + D VR + G + G + HIYR LF+H++ E++G + ++++ V V
Sbjct: 669 RNGAEIRIGDTVRELYG--DQRSGVILHIYRSFLFLHNKAQAENSGIVVVRTTNVVTV-- 724
Query: 455 SRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVR 514
S G G ++ N IP + GPP GHD L+G TV+VR
Sbjct: 725 SAKGGRSTGPDLTKMNPALMRSGIPGA-----SMGPPKSF-------GHDRLIGKTVQVR 772
Query: 515 LGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETP 574
GPYKG G V D RVEL S+ K+VT+ + ++ V+ D R G G P
Sbjct: 773 KGPYKGLVGIVKDSTDVQARVELHSRNKLVTIPKDVLIVKDPVTGQTLDMSRKG-GQRVP 831
Query: 575 MHPSRTPLHPY---MTPM--RDAGATPIHDG---MRTPM-------RDRAWN-PYTPMSP 618
S P + TPM D+ TP G RTP R AW + S
Sbjct: 832 YGASAAPPSGWSGGRTPMAAADSSRTPAWGGASSARTPAWAGISGSRTPAWKMDGSRTSN 891
Query: 619 PRDNWEDGNPGSWGTSPQYQPGS-------PPSRAYEAPTPGS---GWASTPGGNYSDAG 668
P D G+ +P + G+ S ++A GS W G + A
Sbjct: 892 PYDGSRTAYGGAGSRTPAWNAGARTPYDSGSGSSGFDAFAAGSRTPAWGGANAGGRTPAW 951
Query: 669 TPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVI 725
+ S+ + Y PGG P +Y TPG TPG A +P +
Sbjct: 952 SASSSAGSGNRDSRGYDAPNPGGAYSAPTPGAYTAPTPGASAPTPGAWADSAPTPGV 1008
>gi|302682782|ref|XP_003031072.1| hypothetical protein SCHCODRAFT_68669 [Schizophyllum commune H4-8]
gi|300104764|gb|EFI96169.1| hypothetical protein SCHCODRAFT_68669 [Schizophyllum commune H4-8]
Length = 1098
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 204/654 (31%), Positives = 335/654 (51%), Gaps = 71/654 (10%)
Query: 1 MQKCIDKGSE---LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K ID + LQI S + L+ Y+YIEA V A GL I+ ++ + LVPI
Sbjct: 185 MRKAIDLEFQPKPLQIYSAFYRESLQGYVYIEARSSRAVSHAINGLIGIFPTRGITLVPI 244
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIG-NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL 115
EMT +L ++ K ++++ WVR+K Y GDLA+V+DV + ++LIPRID++
Sbjct: 245 DEMTSLLQLKQKDLNITPGMWVRLKKPLKYAGDLAQVIDVTENGEEAGLRLIPRIDMRPP 304
Query: 116 ANK-LEGREVAKKK---PFV--PPPRFMNVDEARELHI-RVERRRDPMTGDYFENIGGML 168
++G +KK P V PP NV+ + + R R TG ++ G
Sbjct: 305 DEAPVDGSTKKRKKTAGPGVSRPPQALFNVEAVQSAYGGRAVITRPSTTGRHYI-FAGDT 363
Query: 169 FKDGFLYKTVSMKSISAQNIQPTFDELEKFR---TPGENGESDIASLSTLFANRKKGHFM 225
+K+GFL K + IS ++ P+ DE+ +F + GE+GE ++ +++ A+RK +
Sbjct: 364 YKNGFLEKDFKLSWISTEDANPSLDEITQFTRGMSAGEDGEVNLTAIAE--ASRKAATLV 421
Query: 226 --KGDAVIVIKGDLKNLKGWVEKVDEENVHIRP----EMKGLPKTLAVNSKELCKYFEPG 279
GD V V +G L+G VE++ + + I +++G + + V ++ + K F+PG
Sbjct: 422 LQPGDQVEVFEGAQAGLQGMVEEIRGDIITISAGVGSDVEG--QKIEVTARSVRKRFKPG 479
Query: 280 NHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYE 339
+HVKV++G A TG+V+ V +V+ +SD T +++ VF+ D+ E++EV T +GDYE
Sbjct: 480 DHVKVMAGQNADETGLVVSVSDNVVTFVSDMTMKEVSVFSKDLREAAEVGTSTNIVGDYE 539
Query: 340 LRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV-QDRNKN 398
L DLV L+ ++ GVI R E ++F VL + +V+ +I + + + + D +
Sbjct: 540 LHDLVQLEYSTVGVIFRTERDSFWVLD---QNGQKRMVQPHQIAMRRDSRHAIAADNTGH 596
Query: 399 TVAVKDVVRIVEGP-CKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ ++D+V+ V+G G++G V HI++ F+H+R E+ G K+ S V +
Sbjct: 597 ELRIQDMVKEVDGEVSSGRKGRVLHIHQSFYAFLHNREIPENGGIFVTKTRSLAPV--TP 654
Query: 457 ANGDRNGDAYSRFN-SLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRL 515
N + S+ N +L I Q GRG D +G V +
Sbjct: 655 RNEIKASTDLSKMNPALSASMAIGQI-----------------GRGPRDRDIGLHVCIIK 697
Query: 516 GPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS---DNVVVSTPYRDTP-RYGMGS 571
GP KGY GR+ D G RVEL K++++D+S ++ N + + R+ P R MG
Sbjct: 698 GPQKGYYGRIKDTNGNLARVELTGN-KIISIDKSKLAVKDGNQMQALGDRNRPRRTNMGP 756
Query: 572 ETPMHPSRTPLHPYM-----TPMR-DAGATP---IHDGMRTP---MRDRAWNPY 613
P + S ++PY TPM A TP +++G RTP R NPY
Sbjct: 757 --PSNMSSPSVNPYASQTPGTPMWGSASRTPNPYMNNGGRTPAWSTNSRTPNPY 808
>gi|325087847|gb|EGC41157.1| transcription initiation protein spt5 [Ajellomyces capsulatus H88]
Length = 1083
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 231/817 (28%), Positives = 378/817 (46%), Gaps = 145/817 (17%)
Query: 1 MQKCIDK--GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLV 54
M++ D+ GS IR + A + + YIY+EA K+A V +A + N+Y++ K++L+
Sbjct: 250 MKRIEDRPPGSRRPIRIMSAFERGGTMSGYIYVEARKQADVVDALNDMSNVYTKSKMILI 309
Query: 55 PIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID--L 112
++EM D+L V +K+ +L WVR+K G Y+GDLA++ DV+ VTV+L+PR+D L
Sbjct: 310 SVKEMPDLLRV-TKSEELIPGGWVRIKRGKYQGDLAQLEDVETNGLDVTVRLVPRLDYGL 368
Query: 113 QALANKLEGREVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGG 166
G +V +K+P V PP R + EA++ H + + G + +G
Sbjct: 369 NEDMGAPNG-DVKRKRPGVGSTIARPPQRPFSEAEAKKKHAKYLSATSGLGGKTWNYLGD 427
Query: 167 MLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRK---KGH 223
+ DGFL K + ++ + +N+ P DE+ KF ++G +++ + + + +
Sbjct: 428 N-YVDGFLIKDMKVQHLITKNVNPQLDEVTKFARGADDGTANLDLAALAASLKNTTTEDS 486
Query: 224 FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + + G + V ++ E++G + + V K L K F+ G+
Sbjct: 487 YLPGDTVEVFQGEQQGVVGKTVSTRGDIVSVKVTQGELEG--QQIDVPIKGLRKRFQEGD 544
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDY 338
HVKV+ G++ GMV++++ + +LSD + ++I VF+ D+ E+++ G+ K+G Y
Sbjct: 545 HVKVIGGSRFRDELGMVVRIKDDRVTLLSDMSMQEITVFSKDIREAADA--GVDGKLGMY 602
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRN 396
++ DLV LD + G II+++ E+ +VL V V ++ K+ ++ N DRN
Sbjct: 603 DVHDLVQLDQATVGCIIKLDRESMRVLD---QNGSVRNVLPSQVMNKIPQRRNAVSTDRN 659
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ + D VR G + + G + HI+R LF+ ++ ++AG I ++S+ V S
Sbjct: 660 GSEIRCGDTVREFTG--EQRTGAILHIHRSFLFLKNKDASDNAGIIVTRASNVTTVATSG 717
Query: 457 AN-GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRL 515
R+ +SR N P I Q G G PP G D +G TV +R
Sbjct: 718 GRLASRSAPDFSRMN-----PAI-QKNGMNGSGMPPPKSF------GRDRTIGKTVTIRK 765
Query: 516 GPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS---------------------DN 554
GP+KG G V D RVEL S+ KV+TVD+ M+S
Sbjct: 766 GPFKGLLGIVKDTTDTQARVELHSKNKVITVDKDMLSIKDPITGASIDLSRYGGRGGGGV 825
Query: 555 VVVSTPYRDT--PRYGMGSETPM---HPSRTPLHPYMTPMRDAGATPIHDGMRTPMR--- 606
TP+ + P GS TP+ SRTP + A + G RTP
Sbjct: 826 GRGRTPHSSSAAPPDWSGSRTPLAANDSSRTPAWRSSSSRTPAWGSATASGSRTPAWKAD 885
Query: 607 -DRAWNPY-----------TPMSPPRDNWEDGN--------------------------- 627
R NPY TP W G
Sbjct: 886 GSRTSNPYDASRTAYGGGRTPA------WTSGTKTPYDSSSGFGSSSTSGFDAFAAGSRT 939
Query: 628 ---PGSWGTSPQYQPGS--PP--------SRAYEAPTPGSGWASTPGGNYSDAGTPRDSS 674
PG+ +P + PGS PP Y+APTPG+ +++ G Y A TP ++
Sbjct: 940 PAYPGAGSRTPAWAPGSAAPPPIGHSSGSKGGYDAPTPGADYSAPTPGPYGSASTPGATA 999
Query: 675 ST----YVNAPSPYLPSTPGGQPMTPNSASYLPGTPG 707
+T NAP+P P TP+++ Y PG
Sbjct: 1000 ATPRGWADNAPTPGAIHAP-----TPDASGYSAKRPG 1031
>gi|225558822|gb|EEH07105.1| transcription initiation protein spt5 [Ajellomyces capsulatus G186AR]
Length = 1083
Score = 239 bits (611), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 232/817 (28%), Positives = 379/817 (46%), Gaps = 145/817 (17%)
Query: 1 MQKCIDK--GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLV 54
M++ D+ GS IR + A + + YIY+EA K+A V +A + N+Y++ K++L+
Sbjct: 250 MKRIEDRPPGSRRPIRIMSAFERGGTMSGYIYVEARKQADVVDALNDMSNVYTKSKMILI 309
Query: 55 PIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID--L 112
++EM D+L V +K+ +L WVR+K G Y+GDLA++ DV+ VTV+L+PR+D L
Sbjct: 310 SVKEMPDLLRV-TKSEELIPGGWVRIKRGKYQGDLAQLEDVETNGLDVTVRLVPRLDYGL 368
Query: 113 QALANKLEGREVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGG 166
G +V +K+P V PP R + EA++ H + + G + +G
Sbjct: 369 NEDMGAPNG-DVKRKRPGVGSTIARPPQRPFSEAEAKKKHAKYLSATSGLGGKTWNYLGD 427
Query: 167 MLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRK---KGH 223
+ DGFL K + ++ + +N+ P DE+ KF ++G +++ + + + +
Sbjct: 428 N-YVDGFLIKDMKVQHLITKNVNPQLDEVTKFARGADDGTANLDLAALAASLKNTTTEDS 486
Query: 224 FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + + G + V ++ E++G + + V K L K F+ G+
Sbjct: 487 YLPGDTVEVFQGEQQGVVGKTVSTRGDIVSVKVTQGELEG--QQIDVPIKGLRKRFQEGD 544
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDY 338
HVKV+ G++ GMV++++ + +LSD + ++I VF+ D+ E+++ G+ K+G Y
Sbjct: 545 HVKVIGGSRFRDELGMVVRIKDDRVTLLSDMSMQEITVFSKDIREAADA--GVDGKLGMY 602
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRN 396
++ DLV LD + G II+++ E+ +VL V V ++ K+ ++ N DRN
Sbjct: 603 DVHDLVQLDQATVGCIIKLDRESMRVLD---QNGSVRNVLPSQVMNKIPQRRNAVSTDRN 659
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ + D VR V G + + G + HI+R LF+ ++ ++AG I ++S+ V S
Sbjct: 660 GSGMGCGDTVREVTG--EQRTGAILHIHRSFLFLKNKDASDNAGIIVTRASNVTTVATSG 717
Query: 457 AN-GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRL 515
R+ +SR N P I Q G G PP G D +G TV +R
Sbjct: 718 GRLASRSAPDFSRMN-----PAI-QKNGMNGSGMPPPKSF------GRDRTIGKTVTIRK 765
Query: 516 GPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS---------------------DN 554
GP+KG G V D RVEL S+ KV+TVD+ M+S
Sbjct: 766 GPFKGLLGIVKDTTDTQARVELHSKNKVITVDKDMLSIKDPITGASIDLSRYGGRGGGGV 825
Query: 555 VVVSTPYRDT--PRYGMGSETPM---HPSRTPLHPYMTPMRDAGATPIHDGMRTPMR--- 606
TP+ + P GS TP+ SRTP + A + G RTP
Sbjct: 826 GRGRTPHSSSAAPPDWSGSRTPLAANDSSRTPAWRSSSSRTPAWGSATASGSRTPAWKAD 885
Query: 607 -DRAWNPY-----------TPMSPPRDNWEDGN--------------------------- 627
R NPY TP W G
Sbjct: 886 GSRTSNPYDASRTAYGGGRTPA------WTSGTKTPYDSSSGFGSSSTSGFDAFAAGSRT 939
Query: 628 ---PGSWGTSPQYQPGS--PP--------SRAYEAPTPGSGWASTPGGNYSDAGTPRDSS 674
PG+ +P + PGS PP Y+APTPG+ +++ G Y A TP ++
Sbjct: 940 PAYPGAGSRTPAWAPGSAAPPPIGHSSGSKGGYDAPTPGADYSAPTPGPYGSAPTPGATA 999
Query: 675 ST----YVNAPSPYLPSTPGGQPMTPNSASYLPGTPG 707
+T NAP+P P TP+++ Y PG
Sbjct: 1000 ATPRGWADNAPTPGAIHAP-----TPDASGYSAKRPG 1031
>gi|328861036|gb|EGG10140.1| hypothetical protein MELLADRAFT_115567 [Melampsora larici-populina
98AG31]
Length = 1212
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 177/571 (30%), Positives = 287/571 (50%), Gaps = 51/571 (8%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L+I SV D LK YIY+EA E V++A +G +Y + +VPI EM D+L + +
Sbjct: 213 LRIISVFFRDSLKGYIYVEARLETDVRDAVQGFVGVYRTEFRMVPIEEMPDLLRTKKRET 272
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVA----- 125
+ +WVR+K G Y GDLA+V ++ V ++ +PRIDL K EG +V
Sbjct: 273 PIVNGSWVRIKRGKYAGDLAQVNEIMENADDVGLRFVPRIDLNP---KEEGMQVGPDGKK 329
Query: 126 KKK--------PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
+KK F PP +F N +E ++ + + R G F G FK+G++ K
Sbjct: 330 RKKGSTTSGGLAFRPPQKFFNAEEVKKAYKAADVSRTKNGGYMFR---GDFFKEGYIEKD 386
Query: 178 VSMKSISAQNIQPTFDELEKFR-TPGENGESDI-ASLSTLFANRKKGH---FMKGDAVIV 232
+ + ++ ++ PT DE+ +F P + G+++ +LS + KK GD V V
Sbjct: 387 MRISALEVVDVNPTIDEVARFLGDPSDTGDTNRDLNLSQIAELTKKASVIVLQPGDQVEV 446
Query: 233 IKGDLKNLKGWVEKVDEENVHI------RPEMKGLPKTLAVNSKELCKYFEPGNHVKVVS 286
+GD K ++G V + E V I PE++G + + ++ L K F+PG+HVKV++
Sbjct: 447 FEGDQKGIQGTVHSIANEIVTIDPSPLLHPELRG--AHIEIPARSLRKNFKPGDHVKVMA 504
Query: 287 GTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL 346
G TG+V++V + V+ LSD + +++ VFA D+ ++EV +G G +EL DLV L
Sbjct: 505 GQNVDETGLVIRVREEVVTFLSDLSCKEVEVFARDLRVAAEVGSGANTYGQFELYDLVQL 564
Query: 347 DNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDV 405
D + GVI ++E + F+V+ VK +I K + + + D + +AV D
Sbjct: 565 DPQTTGVIFKIERDTFKVID---QNGNTRNVKPNQISAKKDSRHAIATDADGYEIAVNDQ 621
Query: 406 V--RIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN 462
+ + + G +G++G V HIYR + F+H E+ G + + V V D
Sbjct: 622 MKEKSIGGRTEGRRGRVLHIYRSMYAFLHSHDTTENGGVFVTNARNLVSVAPKGGKKDAG 681
Query: 463 GDAYSRFNSLRTPPRIPQSPGRYSRGG--PPAGGRNRGGRGGHDALVGTTVKVRLGPYKG 520
++ N P+ GR GG P AGG G R D +G + GP KG
Sbjct: 682 ALDLTKMN--------PEMAGRPPVGGVAPVAGG--LGQRFKRDEDIGKLCYIIKGPNKG 731
Query: 521 YRGRVVDVKGQSVRVELESQMKVVTVDRSMI 551
+G + D+ G RVEL + K +TV+++ +
Sbjct: 732 LQGIIKDINGLLARVELHTNNKTLTVEKTKL 762
>gi|34785805|gb|AAH57529.1| Supt5h protein [Danio rerio]
Length = 856
Score = 239 bits (610), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 143/415 (34%), Positives = 242/415 (58%), Gaps = 21/415 (5%)
Query: 3 KCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIRE 58
+C D + LQI+SV+A +H+K YIY+EA K+ HVK A +G+ N+ ++Q+ +VPI+E
Sbjct: 203 QCTD--TPLQIKSVVAPEHVKGYIYVEAYKQTHVKAAIEGVGNLRMGFWNQQ--MVPIKE 258
Query: 59 MTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANK 118
MTDVL V + +L +WVR+K G YK D+A+V V+ + +++K+IPRIDL + +
Sbjct: 259 MTDVLKVVKEVTNLKPKSWVRLKRGLYKDDIAQVDYVEPSQNTISLKMIPRIDLDRIKAR 318
Query: 119 LEGRE-VAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYK 176
+ ++ AK+K F PP R + ++ R L V GD+ + GFL+K
Sbjct: 319 MSMKDWFAKRKKFKRPPQRLFDAEKIRSLGGEVSH-----DGDFMIFEANRYSRKGFLFK 373
Query: 177 TVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGD 236
+ +M ++ + ++PT ELEKF E + ++ + +T ++ + GD V V +G+
Sbjct: 374 SFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTETT--GKEREHNLQAGDNVEVCEGE 431
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
L NL+G + VD + I P+ + L L + EL KYF G+HVKV++G G TG++
Sbjct: 432 LINLQGKILSVDGNKITIMPKHEDLKDPLEFPAHELRKYFRMGDHVKVIAGRYEGDTGLI 491
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
++VE++ +I+ SD T +++V D+ SE +G+ G +E +LV LD + GVI+R
Sbjct: 492 VRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDAGGQHEWGELVQLDPQTVGVIVR 551
Query: 357 VESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVE 410
+E E FQVL +V V+ + + + + + V D +N + VKD+V++++
Sbjct: 552 LERETFQVLNM---HGKVLTVRHQAVNRRKDNRFAVALDSEQNNIHVKDIVKVID 603
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 123/252 (48%), Gaps = 37/252 (14%)
Query: 595 TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQ--YQPG-SPPSRAYEAPT 651
TP + + +P + +NP TP +P N + +P + SPQ YQP SP S AP+
Sbjct: 629 TPGYPEVPSPQVNPQYNPQTPGTPAMYNTDQYSPYA-APSPQGSYQPSPSPQSYHQVAPS 687
Query: 652 P-GSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGG-Q 709
P G +P + P S Y +PSP S G PMTP + S PGG
Sbjct: 688 PVGYQNTHSPASYH-----PTPSPMAYQASPSP---SPVGYSPMTPGAPS-----PGGYN 734
Query: 710 PMTPGTGGLDAMSPVIGADNEGPWFMPDILVR------RSGEESVVGVIREVLPDGSCRV 763
P TPG S + A N+ W DI+VR G + G+IR V G C V
Sbjct: 735 PHTPG-------SNIDQASND--WVTTDIMVRVKDTFLDGGVINQTGIIRSVT-GGMCSV 784
Query: 764 VLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLD 823
L + +I++ +E V P K +K+K++ G R ATG L+ +DG DGIV++++
Sbjct: 785 FLQDTEKVVSISS--EHLEPVTPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMELDEQ 842
Query: 824 VKILDMAILAKL 835
+KIL++ L KL
Sbjct: 843 LKILNLRFLGKL 854
>gi|119500830|ref|XP_001267172.1| transcription initiation protein spt5 [Neosartorya fischeri NRRL 181]
gi|119415337|gb|EAW25275.1| transcription initiation protein spt5 [Neosartorya fischeri NRRL 181]
Length = 1050
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 229/777 (29%), Positives = 377/777 (48%), Gaps = 80/777 (10%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ GS I+ + A + + YIY+EA ++A V EA + + N+Y + K++L
Sbjct: 252 IQKRIEERPPGSRKPIKIISAFERGGAMSGYIYVEARRQADVMEALEDMSNVYPRTKMIL 311
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP+REM D+L V+ K+ +L+ WVR+K G Y+GDLA++ +VD VTV+L+PR+D
Sbjct: 312 VPVREMPDLLRVQ-KSEELNPGGWVRIKRGKYQGDLAQIEEVDTNGLEVTVRLVPRLDYG 370
Query: 114 ALANKLEGR---EVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENI 164
N+ G ++ +K+P + PP R + EA++ H + + G + +
Sbjct: 371 L--NEDSGAPVVDIKRKRPGMASGGPRPPQRLFSEAEAKKRHGKYLSATSGLGGKSWSYL 428
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKK 221
G + DGFL K + ++ + +N+ P +E+ F ++G S D+ASL+ TL + +
Sbjct: 429 G-ETYIDGFLIKDMKVQHLITKNVNPRLEEVTMFARGSDDGTSNLDLASLAETLKNSTAE 487
Query: 222 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEP 278
++ GD V V +G+ + L G + V ++ E+ G + + K L K F
Sbjct: 488 ESYLPGDPVEVFRGEQQGLVGRTTSTRGDIVTLQVTEGELAG--QMIEAPVKSLRKRFRE 545
Query: 279 GNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIG 336
G+HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+ S+E TG+ K+G
Sbjct: 546 GDHVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLRLSAE--TGVDGKLG 603
Query: 337 DYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QD 394
+++ DLV LD ++ +++V+ E+ +VL + V ++ K+ + + D
Sbjct: 604 MFDVHDLVQLDASTVACVVKVDRESLRVLD---QNGSIRTVLPSQVANKITPRRDAVATD 660
Query: 395 RNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
RN + + D VR + G + G + HIYR LF+H++ E++G + ++++ V V
Sbjct: 661 RNGAEIRIGDTVRELYG--DQRSGVILHIYRSFLFLHNKAQAENSGIVVVRTTNVVTV-- 716
Query: 455 SRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVR 514
S G G ++ N IP + S G P + GR+R L+G TV+VR
Sbjct: 717 SAKGGRSTGPDLTKMNPALMRNGIPGA----SMGPPKSFGRDR--------LIGKTVQVR 764
Query: 515 LGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETP 574
GPYKG G V D RVEL S+ K+VT+ + ++ V+ D R G G P
Sbjct: 765 KGPYKGLVGIVKDSTDVQARVELHSRNKLVTIPKDVLIVKDPVTGQTLDMSRKG-GQRVP 823
Query: 575 MHPSRTPLHPYM---TPM--RDAGATPIHDG---MRTPM-------RDRAWN-PYTPMSP 618
S P + TPM D+ TP G RTP R AW + S
Sbjct: 824 YGASAAPPSGWSGGRTPMAAADSSRTPAWGGASSARTPAWAGISGSRTPAWKIDGSRTSN 883
Query: 619 PRDNWEDGNPGSWGTSPQYQPGS-------PPSRAYEAPTPGS---GWASTPGGNYSDAG 668
P D G+ +P + G+ S ++A GS W G + A
Sbjct: 884 PYDGSRTAYGGAGSRTPAWNAGARTPYDSGSGSSGFDAFAAGSRTPAWGGANAGGRTPAW 943
Query: 669 TPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVI 725
+ S+ + Y TPGG P +Y TPG TPG A +P +
Sbjct: 944 SASSSAESGNRDSRGYDAPTPGGAYSAPTPGAYTAPTPGASAPTPGAWADSAPTPGV 1000
>gi|154275548|ref|XP_001538625.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150415065|gb|EDN10427.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1080
Score = 236 bits (603), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 232/817 (28%), Positives = 382/817 (46%), Gaps = 145/817 (17%)
Query: 1 MQKCIDK--GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLV 54
M++ D+ GS IR + A + + YIY+EA K+A V +A + N+Y++ K++L+
Sbjct: 247 MKRIEDRPPGSRRPIRIMSAFERGGTMSGYIYVEARKQADVVDALNDMSNVYTKSKMILI 306
Query: 55 PIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID--L 112
++EM D+L V +K+ +L WVR+K G Y+GDLA++ DV+ VTV+L+PR+D L
Sbjct: 307 SVKEMPDLLRV-TKSEELIPGGWVRIKRGKYQGDLAQLEDVETNGLDVTVRLVPRLDYGL 365
Query: 113 QALANKLEGREVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGG 166
G +V +K+P V PP R + EA++ H + + G + +G
Sbjct: 366 NEDMGAPNG-DVKRKRPGVGSTIARPPQRPFSEAEAKKKHAKYLSATSGLGGKTWNYLGD 424
Query: 167 MLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRK---KGH 223
+ DGFL K + ++ + +N+ P DE+ KF ++G +++ + + + +
Sbjct: 425 N-YVDGFLIKDMKVQHLITKNVNPQLDEVTKFARGADDGTANLDLAALAASLKNTTTEDS 483
Query: 224 FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + + G + V ++ E+KG + + V K L K F+ G+
Sbjct: 484 YLPGDTVEVFQGEQQGVVGKTVSTRGDIVSVKVTQGELKG--QQIDVPIKGLRKRFQEGD 541
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDY 338
HVKV+ G++ GMV++++ + +LSD + ++I VF+ D+ E+++ G+ K+G Y
Sbjct: 542 HVKVIGGSRFRDELGMVVRIKDDRVTLLSDMSMQEITVFSKDIREAADA--GVDGKLGMY 599
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRN 396
++ DLV LD + G II+++ E+ +VL V V ++ K+ ++ N DRN
Sbjct: 600 DVHDLVQLDQATVGCIIKLDRESMRVLD---QNGSVRNVLPSQVMNKIPQRRNAVSTDRN 656
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ + D VR V G + + G + HI+R LF+ ++ ++AG I ++S+ V S
Sbjct: 657 GSEIRCGDTVREVTG--EQRTGAILHIHRSFLFLKNKDASDNAGIIVTRASNVTTVATSG 714
Query: 457 AN-GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRL 515
R+ +S N P I Q G G PP G D +G TV +R
Sbjct: 715 GRLASRSAPDFSTMN-----PAI-QKNGMNGSGMPPPKSF------GRDRTIGKTVTIRK 762
Query: 516 GPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS--DNVVVST-------------- 559
GP+KG G V D RVEL S+ KV+TVD+ M+S D + ++
Sbjct: 763 GPFKGLLGIVKDTTDAQARVELHSKNKVITVDKDMLSIKDPITGASIDLSRYGGRGGGGV 822
Query: 560 -----PYRDT--PRYGMGSETPM---HPSRTPLHPYMTPMRDAGATPIHDGMRTPMR--- 606
P+ + P GS TP+ SRTP + A + G RTP
Sbjct: 823 GRGRIPHNSSAAPPDWSGSRTPLAANDSSRTPAWRSSSSRTPAWGSATASGSRTPAWKAD 882
Query: 607 -DRAWNPY-----------TPMSPPRDNWEDG---------------------------- 626
R NPY TP W G
Sbjct: 883 GSRTSNPYDASRTAYGGGRTPA------WTSGTKTPYDSSSGFGSSSTSGFDAFAAGSRT 936
Query: 627 --NPGSWGTSPQYQPGS--PP--------SRAYEAPTPGSGWASTPGGNYSDAGTPRDSS 674
+PG+ +P + PGS PP Y+APTPG+ +++ G Y A TP ++
Sbjct: 937 PAHPGAGSRTPAWAPGSAAPPPIGHSNGSKGGYDAPTPGADYSAPTPGPYGSAPTPGATA 996
Query: 675 ST----YVNAPSPYLPSTPGGQPMTPNSASYLPGTPG 707
+T NAP+P P TP+++ Y PG
Sbjct: 997 ATPRGWADNAPTPGAIHAP-----TPDASGYSGKRPG 1028
>gi|321250491|ref|XP_003191826.1| pol II protein elongation factor [Cryptococcus gattii WM276]
gi|317458293|gb|ADV20039.1| Pol II protein elongation factor, putative [Cryptococcus gattii
WM276]
Length = 1152
Score = 236 bits (601), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 204/710 (28%), Positives = 335/710 (47%), Gaps = 68/710 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKA 69
+ + SV D + I+IEA + A V A G+ I+ S+ V LVPI EM +L ++ K
Sbjct: 237 IDVISVFCRDSIPGMIFIEARQSASVSAAVNGIVGIFMSKGVNLVPIEEMAPLLKMKKKD 296
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVT-VKLIPRIDLQALANKLEGREVAKKK 128
++L+ WVRMK G + GDLA+VVDVD + V +K IPRIDL + E + K
Sbjct: 297 VNLTPGMWVRMKRGKHAGDLAQVVDVDQITSGVVGIKFIPRIDLTPREKRKERIAIGKPG 356
Query: 129 PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNI 188
PP R D+ R+++ R R+ F+N + DGF K V + +++ +++
Sbjct: 357 GVRPPARLFAYDDVRKIYGRQSVRQGAQGSYLFDND---EYVDGFCIKDVKIPAVATEDV 413
Query: 189 QPTFDELEKFRTPGEN-GESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKV 247
PT +E+ +F ++ + D+++++ N GD + V +G+ L G VE V
Sbjct: 414 NPTLEEISRFTGDDDSTAKFDLSAIADANKNLSTSLLFPGDKIEVYEGEQTGLCGIVETV 473
Query: 248 DEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLII 306
+ + I+ E + +T+ V ++ + K F+ G HVKV+ G A+GMV++V+ ++ +
Sbjct: 474 SSDVIAIKAEGGEVHGQTVEVPARSVRKRFDVGEHVKVLGGKHTDASGMVVEVKGDIVTL 533
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVL- 365
+SD +++I+VF+ D+ ++++ T G Y++ D+V+LD+ + GV+ +VE ++L
Sbjct: 534 MSDLGEQEIKVFSKDLRKAADTTNLTATKGLYDVHDMVMLDSTTAGVVTKVEGGLLRILD 593
Query: 366 -----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
KGV PE V LR + ++ Q N + V D ++ ++G +QG V
Sbjct: 594 QNGAAKGV--SPE--QVSLRRDNKRFAVATDSQG---NDMKVGDSMKEIDGEM--RQGEV 644
Query: 421 EHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIP 479
+I+R I F+++R + ++ G A+++S V V A D ++ N P
Sbjct: 645 INIFRSIFVFLYNREYTDNFGVFVARANSLVSVTPKSAVND-----LTKIN----PALNQ 695
Query: 480 QSP-GRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELE 538
Q P G S P NR + L+ T V V G KG G + DV+G++ RVEL+
Sbjct: 696 QLPYGGASLIPAPTANLNR------NRLINTLVVVTKGTSKGLIGVIKDVQGENARVELK 749
Query: 539 SQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSR--------------TPLHP 584
K ++V+ S + + G+GS + +R T +HP
Sbjct: 750 HNNKTLSVNLSSLKRKDQKTGATFPLEMAGVGSAAGGYGARPNAGQYDINPYGGATAMHP 809
Query: 585 YMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPS 644
M G TP G RTP P P S N + NP + G G PS
Sbjct: 810 SM-----GGQTPALMGGRTPAVRFGQTP-NPYSAGVQNGKTPNPYATGVG-----GKTPS 858
Query: 645 RAY----EAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPG 690
AY + P G+ TP + G P+PY PG
Sbjct: 859 AAYASGGKTPAWGASGGKTPAYGMASGGKTPAYGMQGGKTPNPYAMGPPG 908
>gi|58259115|ref|XP_566970.1| Pol II transcription elongation factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|338819505|sp|P0CR70.1|SPT5_CRYNJ RecName: Full=Transcription elongation factor SPT5; AltName:
Full=Chromatin elongation factor SPT5
gi|57223107|gb|AAW41151.1| Pol II transcription elongation factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 1152
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 225/791 (28%), Positives = 361/791 (45%), Gaps = 106/791 (13%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKA 69
+ + SV D + I+IEA + A V A G+ I+ S+ V LVPI EM +L ++ K
Sbjct: 237 IDVISVFCRDSIPGMIFIEARQSASVSAAVNGIVGIFMSRGVNLVPIEEMAPLLKMKKKD 296
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVT-VKLIPRIDLQALANKLEGREVAKKK 128
++L+ WVRMK G + GDLA+VVDVD + V +K IPRIDL + E + K
Sbjct: 297 VNLTPGMWVRMKRGKHAGDLAQVVDVDQITSGVVGIKFIPRIDLTPREKRKERIAIGKPG 356
Query: 129 PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNI 188
PP R D+ R+++ R R+ F+N + DGF K V + +++ +++
Sbjct: 357 GVRPPARLFAYDDVRKIYGRQSVRQGAQGSYLFDND---EYVDGFCIKDVKIPAVATEDV 413
Query: 189 QPTFDELEKFRTPGEN-GESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKV 247
PT +E+ +F ++ + D+++++ N GD + V +G+ L G VE V
Sbjct: 414 NPTLEEISRFTGDDDSTAKFDLSAIADANKNLSTSLLFPGDKIEVYEGEQTGLYGIVEAV 473
Query: 248 DEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLII 306
+ + I+ E + +T+ V ++ + K F+ G HVKV+ G A+GMV++V+ ++ +
Sbjct: 474 SPDVIAIKAEGGEVHGQTVEVPARSVRKRFDVGEHVKVLGGKHTDASGMVVEVKGDIVTL 533
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLK 366
+SD +++I+VF+ D+ ++++ T G Y++ D+V+LD+ + GV+ +VE ++L
Sbjct: 534 MSDLGEQEIKVFSKDLRKAADTTNLTVTKGLYDVHDMVMLDSTTAGVVTKVEGGLLRILD 593
Query: 367 GVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRG 426
V+ ++ I+ ++ + D N + V D ++ +G +QG V +I+R
Sbjct: 594 QNGAAKSVSPEQV-SIRRDNKRFAVATDSQGNDMKVGDNMKETDGEM--RQGEVFNIFRS 650
Query: 427 IL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSP-GR 484
I F+++R + ++ G A+++S + V A D ++ N P Q P G
Sbjct: 651 IFVFLYNREYTDNFGVFVARANSLISVTPKSAVND-----LTKIN----PALNQQLPYGG 701
Query: 485 YSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVV 544
S P NR + L+ T V V G KG G + DV+G++ RVEL+ K +
Sbjct: 702 ASLMPAPTANLNR------NRLINTLVVVTKGTSKGLIGVIKDVQGENARVELKHNNKTL 755
Query: 545 TVDRSMISDN---------------VVVSTPYRDTPRYGM------GSETPMHPSRTPLH 583
+V+ + + + Y P G G T MHPS
Sbjct: 756 SVNLASLKRKDQKTGATFPLEMAGIASAAGGYGARPNAGQYDINPYGGATAMHPSMGGQT 815
Query: 584 PYM----TPMRDAGATP------IHDGMRTPMRDRAWNPYTP----MSPPRDNWEDGNPG 629
P + TP G TP + +G +TP NPY +P N G
Sbjct: 816 PALMGGRTPAARFGQTPNPYAAGVQNG-KTP------NPYAAGVGGKTPSAANASGGKTP 868
Query: 630 SWGTS----PQY-------------QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
+WG S P Y Q G P+ AY PG TP Y G P
Sbjct: 869 AWGASGGKTPAYGMASGGKTPAYGMQGGKTPN-AYAMAPPGPSGGRTPA--YGAYGRPEA 925
Query: 673 SSST-YVNAP------SPYLPSTPGGQ----PMTPNSASYLPGTPGGQPM-----TPGTG 716
S S V AP +PY TP G P P + P TP G P TPG
Sbjct: 926 SGSRPSVMAPPSAPYSAPYSAPTPAGNGAPTPAIPGNPYTAP-TPYGAPTPYAAPTPGMP 984
Query: 717 GLDAMSPVIGA 727
L A +P GA
Sbjct: 985 SLSAPTPGPGA 995
>gi|239611009|gb|EEQ87996.1| transcription initiation protein spt5 [Ajellomyces dermatitidis ER-3]
gi|327350746|gb|EGE79603.1| transcription initiation protein spt5 [Ajellomyces dermatitidis ATCC
18188]
Length = 1087
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 234/816 (28%), Positives = 379/816 (46%), Gaps = 139/816 (17%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+ YIY+EA K+A V +A + N+Y++ K++L+ ++EM D+L V +K+ L WVR+
Sbjct: 278 MSGYIYVEARKQADVLDALNDMSNVYTKSKMILISVKEMPDLLRV-TKSEQLIPGGWVRI 336
Query: 81 KIGNYKGDLAKVVDVDNVRQRVTVKLIPRID--LQALANKLEGREVAKKKPFV------P 132
K G Y+GDLA++ DV+ VTV+L+PR+D L G +V +K+P P
Sbjct: 337 KRGKYQGDLAQLEDVETNGLDVTVRLVPRLDYGLNEDMGAPNG-DVKRKRPGANSAIARP 395
Query: 133 PPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTF 192
P R + EA++ H R + G + +G + DGFL K + ++ + +N+ P
Sbjct: 396 PQRPFSEAEAKKKHARYLSATSGLGGKTWNYLGDN-YVDGFLIKDMKVQHLITKNVNPQL 454
Query: 193 DELEKFRTPGENGESDIASLSTLFANRK---KGHFMKGDAVIVIKGDLKNLKGWVEKVDE 249
DE+ KF ++G +++ + + + + ++ GD V V +G+ + + G
Sbjct: 455 DEVTKFARGADDGTANLDLAALAASLKNTTTEDSYLPGDTVEVFQGEQQGVVGRTVSTRG 514
Query: 250 ENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLI 305
+ V I+ E++G + + V K L K F+ G+HVKV+ G++ GMV++++ +
Sbjct: 515 DIVSIKVTQGELEG--QQIDVPIKGLRKRFQEGDHVKVIGGSRFRDELGMVVRIKDDRVT 572
Query: 306 ILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
+LSD + ++I VF+ D+ E+++ G+ K+G Y++ DLV LD + G II+++ E+ +V
Sbjct: 573 LLSDMSMQEITVFSKDIREAADA--GVDGKLGMYDVHDLVQLDQATVGCIIKLDRESMRV 630
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEH 422
L V V ++ K+ ++ N DRN + + D VR V G + + G + H
Sbjct: 631 LD---QNGSVRTVLPSQVMNKILQRRNAVSTDRNGSEIRSGDTVREVTG--EQRTGAIIH 685
Query: 423 IYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRAN-GDRNGDAYSRFNSLRTPPRIPQS 481
I+R LF++++ ++AG I ++S+ V S R+ +SR N P I Q
Sbjct: 686 IHRSFLFLNNKDASDNAGIIVTRASNVTTVATSGGRLASRSAPDFSRMN-----PAI-QK 739
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G G PP G D +G TV +R GP+KG G V D RVEL S+
Sbjct: 740 NGMNGSGMPPPKSF------GRDRTIGKTVTIRKGPFKGLLGIVKDTTDAQARVELHSKN 793
Query: 542 KVVTVDRSM--ISDNVVVST-------------------PYRDT--PRYGMGSETPM--- 575
KV+TVD+ M I D + ++ PY + P GS TP+
Sbjct: 794 KVITVDKDMLAIKDPITGASIDLSRYGGRGGGGAGRGRIPYGSSAAPPDWSGSRTPLAAN 853
Query: 576 HPSRTPLHPYMTPMRDAGATPIHDGMRTPMR----DRAWNPY------------------ 613
PSRTP + A + G RTP R NPY
Sbjct: 854 DPSRTPAWRSSSSRTPAWGSATASGSRTPAWKADGSRTSNPYDGSRTAYGGTTFGGGRTP 913
Query: 614 -------TPMS----------PPRDNWEDGN-----PGSWGTSPQYQPGS--PP------ 643
TP D + G+ PG +P + PGS PP
Sbjct: 914 AWTSGTKTPYDSSSGFGGSSTSGFDAFAAGSRTPAYPGGGSRTPAWAPGSAAPPPIGHSS 973
Query: 644 --SRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST----YVNAPSPYLPSTPGGQPMTPN 697
+Y+APTP + +++ G Y A TP +++T NAP+P P TP+
Sbjct: 974 GSKSSYDAPTPSTDYSAPTPGPYGGAPTPGATAATPHGWADNAPTPGAIHAP-----TPD 1028
Query: 698 SASYLPGTPG---GQPMTPGTGG---LDAMSPVIGA 727
++ Y G P GG DA +P +GA
Sbjct: 1029 ASGYSAKRTGELYDAPTPAAIGGGRPYDAPTPAMGA 1064
>gi|134107187|ref|XP_777724.1| hypothetical protein CNBA6020 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819504|sp|P0CR71.1|SPT5_CRYNB RecName: Full=Transcription elongation factor SPT5; AltName:
Full=Chromatin elongation factor SPT5
gi|50260420|gb|EAL23077.1| hypothetical protein CNBA6020 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1152
Score = 234 bits (598), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 225/791 (28%), Positives = 361/791 (45%), Gaps = 106/791 (13%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKA 69
+ + SV D + I+IEA + A V A G+ I+ S+ V LVPI EM +L ++ K
Sbjct: 237 IDVISVFCRDSIPGMIFIEARQSASVSAAVNGIVGIFMSRGVNLVPIEEMAPLLKMKKKD 296
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVT-VKLIPRIDLQALANKLEGREVAKKK 128
++L+ WVRMK G + GDLA+VVDVD + V +K IPRIDL + E + K
Sbjct: 297 VNLTPGMWVRMKRGKHAGDLAQVVDVDQITSGVVGIKFIPRIDLTPREKRKERIAIGKPG 356
Query: 129 PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNI 188
PP R D+ R+++ R R+ F+N + DGF K V + +++ +++
Sbjct: 357 GVRPPARLFAYDDVRKIYGRQSVRQGAQGSYLFDND---EYVDGFCIKDVKIPAVATEDV 413
Query: 189 QPTFDELEKFRTPGEN-GESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKV 247
PT +E+ +F ++ + D+++++ N GD + V +G+ L G VE V
Sbjct: 414 NPTLEEISRFTGDDDSTAKFDLSAIADANKNLSTSLLFPGDKIEVYEGEQTGLYGIVEAV 473
Query: 248 DEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLII 306
+ + I+ E + +T+ V ++ + K F+ G HVKV+ G A+GMV++V+ ++ +
Sbjct: 474 SPDVIAIKAEGGEVHGQTVEVPARSVRKRFDVGEHVKVLGGKHTDASGMVVEVKGDIVTL 533
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLK 366
+SD +++I+VF+ D+ ++++ T G Y++ D+V+LD+ + GV+ +VE ++L
Sbjct: 534 MSDLGEQEIKVFSKDLRKAADTTNLTVTKGLYDVHDMVMLDSTTAGVVTKVEGGLLRILD 593
Query: 367 GVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRG 426
V+ ++ I+ ++ + D N + V D ++ +G +QG V +I+R
Sbjct: 594 QNGAAKSVSPEQV-SIRRDNKRFAVATDSQGNDMKVGDNMKETDGEM--RQGEVFNIFRS 650
Query: 427 IL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSP-GR 484
I F+++R + ++ G A+++S + V A D ++ N P Q P G
Sbjct: 651 IFVFLYNREYTDNFGVFVARANSLISVTPKSAVND-----LTKIN----PALNQQLPYGG 701
Query: 485 YSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVV 544
S P NR + L+ T V V G KG G + DV+G++ RVEL+ K +
Sbjct: 702 ASLMPAPTANLNR------NRLINTLVVVTKGTSKGLIGVIKDVQGENARVELKHNNKTL 755
Query: 545 TVDRSMISDN---------------VVVSTPYRDTPRYGM------GSETPMHPSRTPLH 583
+V+ + + + Y P G G T MHPS
Sbjct: 756 SVNLASLKRKDQKTGATFPLEMAGIASAAGGYGARPNAGQYDINPYGGATAMHPSMGGQT 815
Query: 584 PYM----TPMRDAGATP------IHDGMRTPMRDRAWNPYTP----MSPPRDNWEDGNPG 629
P + TP G TP + +G +TP NPY +P N G
Sbjct: 816 PALMGGRTPAARFGQTPNPYAAGVQNG-KTP------NPYAAGVGGKTPSAANASGGKTP 868
Query: 630 SWGTS----PQY-------------QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
+WG S P Y Q G P+ AY PG TP Y G P
Sbjct: 869 AWGASGGKTPAYGMASGGKTPAYGMQGGKTPN-AYAMAPPGPSGGRTPA--YGAYGRPEA 925
Query: 673 SSST-YVNAP------SPYLPSTPGGQ----PMTPNSASYLPGTPGGQPM-----TPGTG 716
S S V AP +PY TP G P P + P TP G P TPG
Sbjct: 926 SGSRPSVMAPPSAPYSAPYSAPTPAGNGAPTPAIPGNPYTAP-TPYGAPTPYAAPTPGMP 984
Query: 717 GLDAMSPVIGA 727
L A +P GA
Sbjct: 985 SLSAPTPGPGA 995
>gi|406607731|emb|CCH40836.1| Transcription elongation factor [Wickerhamomyces ciferrii]
Length = 1023
Score = 234 bits (597), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 175/583 (30%), Positives = 287/583 (49%), Gaps = 38/583 (6%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVESKA 69
LQI SV D+ Y+Y+EA K V A KG+ +IY + VP+ E D+L A +S
Sbjct: 234 LQILSVFQRDNFTGYVYVEAAKLTAVDHAIKGISDIYGNNKVKVPVEEFPDLLRANKSTE 293
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA-NKLEGREVAKKK 128
+ L+ +VR+K G YKGDLA + ++ VT++++PR+D + + ++ G+
Sbjct: 294 VKLTPGGYVRIKRGKYKGDLAIIDSIEENGLEVTLQVVPRLDYKGMELDEETGKRKRVTS 353
Query: 129 PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNI 188
F PP R + EA E +R T Y G + DGFL+K ++ + Q++
Sbjct: 354 KFRPPQRLFSRKEAVENDPTNLTQRSSNTFSY----KGEEYIDGFLFKLFKVQFLETQDV 409
Query: 189 QPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVD 248
QP+ +E+ KF T G+ E D++S++ N F GD V V++G+ K LKG V
Sbjct: 410 QPSLEEVSKFNT-GDTEELDLSSIAQSVKNSSTVVFRTGDRVQVLQGEQKGLKGDVISTS 468
Query: 249 EENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILS 308
+ V I+P + L + L K F G+H+ V+ G G TG+V+ V++ + +S
Sbjct: 469 NDVVLIKP-ISFSGGNLEFPTNNLRKIFSTGDHISVLRGKHNGHTGIVVSVQEDHVTFIS 527
Query: 309 DTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGV 368
D + +D+ VFA+ + +S++ +T I G Y L DLV ++ + GV+IR + + F +L
Sbjct: 528 DQSHKDVTVFANHLTKSTDTSTLID--GKYGLHDLVRINTTTVGVVIRADKDMFTIL--- 582
Query: 369 PDRPEVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYR 425
+V+ V I K++ +S D ++ D V+ E +QG + HIYR
Sbjct: 583 TQDGKVSAVSPSAIISKVDIGRDQSFATDSTGESIKKGDTVK--ENHGFKRQGVILHIYR 640
Query: 426 GILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRY 485
+LFI+ + E++G + SS V S+ N D + + + P+
Sbjct: 641 SVLFIYSKETTENSGVYVSDISSVSGV-ASKNNFTEKED---KIDLTKMNPKFKAGG--- 693
Query: 486 SRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVT 545
S PP + + GR D + V +RLG YKGYRG V D G RVE ++ K+++
Sbjct: 694 SMAPPPLPIKVQTGR---DKTLNQNVSIRLGEYKGYRGIVKDTNGDIARVEFHTKNKILS 750
Query: 546 VDRS----------MISDNVVVSTPYRDTPRYGMGSETPMHPS 578
+ + +I ++ YRD + G TP H +
Sbjct: 751 ISKHKLAFVDGSGRLIPYEEFINPKYRDFSQPSSGFSTPSHKA 793
>gi|242800831|ref|XP_002483662.1| transcription initiation protein spt5 [Talaromyces stipitatus ATCC
10500]
gi|218717007|gb|EED16428.1| transcription initiation protein spt5 [Talaromyces stipitatus ATCC
10500]
Length = 1024
Score = 233 bits (594), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 233/784 (29%), Positives = 363/784 (46%), Gaps = 92/784 (11%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ G+ ++ + A + + Y+YIE+ ++A V EA GL ++Y + K++L
Sbjct: 228 IQKRIEQRPPGTRHGLKIISAFERGKTMTGYVYIESRRQAEVMEALDGLLDVYPKTKMVL 287
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP++EM D+L V+ K+ +L+ WVR+K G Y+GDLA++ +V+ VTV+L+PR+D
Sbjct: 288 VPVKEMPDLLRVK-KSAELNPGDWVRIKRGKYQGDLAQIEEVETNGLEVTVRLVPRLDY- 345
Query: 114 ALANKLEGREVAKKKPF--------VPPPRFMNVDEARELHIRVERRRDPMTGDYFENIG 165
L L AK+K F PP R + EA + H R ++G + N
Sbjct: 346 GLNEDLSAPADAKRKRFGAANNTAARPPQRLFSEAEASKKHGRHLVGTSNLSGKSW-NYM 404
Query: 166 GMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANR-KKG 222
G + DGFL K + ++ + N+ P +E+ F E+G + D+ASL+ N +
Sbjct: 405 GDTYVDGFLIKEMKIQHLITTNVNPRLEEVTMFARGSEDGAANLDLASLANTLKNTVAED 464
Query: 223 HFMKGDAVIVIKGDLKNLKGWVEKVDEENVHI---RPEMKGLPKTLAVNSKELCKYFEPG 279
+ GD V V KG+ + + G + + + +MKG +T+ K L K F G
Sbjct: 465 AYRPGDQVEVYKGEQQGIIGRTVATRGDIITLEVTEGDMKG--QTIDAPIKTLRKRFREG 522
Query: 280 NHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGD 337
+HVKV+ G++ GMV++V+ + ILSD + E+I VF+ D+ S+E +G+ K+G
Sbjct: 523 DHVKVIGGSRYQDELGMVVQVKGDSVTILSDMSMEEITVFSKDLRLSTE--SGVDGKLGT 580
Query: 338 YELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSN--VQDR 395
+++ DLV LD + II+V+ E+ +V+ V V I K+ K+ + DR
Sbjct: 581 FDVHDLVQLDATTVACIIQVDRESLRVID---QNGSVRNVLPSRIAAKIAKRKDAVATDR 637
Query: 396 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGS 455
N + D VR + G + + G + HI+R LF+H++ E+ G I ++S+ V V S
Sbjct: 638 NGAEIRHGDTVREMYG--EQRSGVIMHIHRSFLFLHNKAQAENTGVIVVRTSNVVTV--S 693
Query: 456 RANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRL 515
G G SR N P I Q PP GG R G D L+G TV +
Sbjct: 694 AKGGRATGPDLSRMN-----PAIMQR--------PPQGGAMPPPRVGRDRLIGKTVGITK 740
Query: 516 GPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYG------- 568
G YKG G V + VRVEL ++ V V R+ + V+ D R G
Sbjct: 741 GSYKGLIGIVRETTEDLVRVELHTKGTKVMVPRTGVVVKDPVTGQTIDMGRGGRPRVPGG 800
Query: 569 ---------MGSETPMHP--SRTPLHPYMTPMRD-AGATPIHDGMRTPMRDRAWNPYTPM 616
GS TP+ SRTP R A G RTP AW
Sbjct: 801 AGGPPQPSWSGSRTPIAAMDSRTPAWGGSLSSRTPAWGGSAASGSRTP----AWKADGSR 856
Query: 617 SPPRDNWEDGNPGSWGT---SPQYQPGSPPSRAYEAPTPGS---GWASTPG-------GN 663
+ G +W + +P S ++A GS W + G N
Sbjct: 857 TAYGGAMGGGRTPAWNSGARTPYSSGSGDSSGGFDAFAAGSRTPAWGTATGSRTPAWSAN 916
Query: 664 YSDAGTPRDSSSTYVNAPSP---YLPSTPGGQPMTPN-SASYLPGTPGGQPMTPGTGGLD 719
++ + +++ +AP+P Y TPG P P AS TP P G L+
Sbjct: 917 HTSSSAATSNNTGRYDAPTPGGDYSAPTPGAYPTAPTPGASGTAATPRWAESVPTPGALN 976
Query: 720 AMSP 723
A +P
Sbjct: 977 APTP 980
>gi|261206062|ref|XP_002627768.1| transcription initiation protein spt5 [Ajellomyces dermatitidis
SLH14081]
gi|239592827|gb|EEQ75408.1| transcription initiation protein spt5 [Ajellomyces dermatitidis
SLH14081]
Length = 1087
Score = 232 bits (592), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 233/816 (28%), Positives = 378/816 (46%), Gaps = 139/816 (17%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+ YIY+EA K+A V +A + N+Y++ K++L+ ++EM D+L V +K+ L WVR+
Sbjct: 278 MSGYIYVEARKQADVLDALNDMSNVYTKSKMILISVKEMPDLLRV-TKSEQLIPGGWVRI 336
Query: 81 KIGNYKGDLAKVVDVDNVRQRVTVKLIPRID--LQALANKLEGREVAKKKPFV------P 132
K G Y+GDLA++ DV+ VTV+L+PR+D L G +V +K+P P
Sbjct: 337 KRGKYQGDLAQLEDVETNGLDVTVRLVPRLDYGLNEDMGAPNG-DVKRKRPGANSAIARP 395
Query: 133 PPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTF 192
P R + EA++ H R + G + +G + DGFL K + ++ + +N+ P
Sbjct: 396 PQRPFSEAEAKKKHARYLSATSGLGGKTWNYLGDN-YVDGFLIKDMKVQHLITKNVNPQL 454
Query: 193 DELEKFRTPGENGESDIASLSTLFANRK---KGHFMKGDAVIVIKGDLKNLKGWVEKVDE 249
DE+ KF ++G +++ + + + + ++ GD V V +G+ + + G
Sbjct: 455 DEVTKFARGADDGTANLDLAALAASLKNTTTEDSYLPGDTVEVFQGEQQGVVGRTVSTRG 514
Query: 250 ENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLI 305
+ V I+ E++G + + V K L K F+ G+HVKV+ G++ GMV++++ +
Sbjct: 515 DIVSIKVTQGELEG--QQIDVPIKGLRKRFQEGDHVKVIGGSRFRDELGMVVRIKDDRVT 572
Query: 306 ILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
+LSD + ++I VF+ D+ E+++ G+ K+G Y++ DLV LD + G II+++ E+ +V
Sbjct: 573 LLSDMSMQEITVFSKDIREAADA--GVDGKLGMYDVHDLVQLDQATVGCIIKLDRESMRV 630
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEH 422
L V V ++ K+ ++ N DRN + + D VR V G + + G + H
Sbjct: 631 LD---QNGSVRTVLPSQVMNKILQRRNAVSTDRNGSEIRSGDTVREVTG--EQRTGAIIH 685
Query: 423 IYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRAN-GDRNGDAYSRFNSLRTPPRIPQS 481
I+R LF++++ ++AG I ++S+ V S R+ +SR N P I Q
Sbjct: 686 IHRSFLFLNNKDASDNAGIIVTRASNVTTVATSGGRLASRSAPDFSRMN-----PAI-QK 739
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G G PP G D +G TV +R GP+KG G V D RVEL S+
Sbjct: 740 NGMNGSGMPPPKSF------GRDRTIGKTVTIRKGPFKGLLGIVKDTTDAQARVELHSKN 793
Query: 542 KVVTVDRSM--ISDNVVVST-------------------PYRDT--PRYGMGSETPM--- 575
KV+TVD+ M I D + ++ PY + P GS TP+
Sbjct: 794 KVITVDKDMLAIKDPITGASIDLSRYGGRGGGGAGRGRIPYGSSAAPPDWSGSRTPLAAN 853
Query: 576 HPSRTPLHPYMTPMRDAGATPIHDGMRTPMR----DRAWNPY------------------ 613
SRTP + A + G RTP R NPY
Sbjct: 854 DASRTPAWRSSSSRTPAWGSATASGSRTPAWKADGSRTSNPYDGSRTAYGGTTFGGGRTP 913
Query: 614 -------TPMS----------PPRDNWEDGN-----PGSWGTSPQYQPGS--PP------ 643
TP D + G+ PG +P + PGS PP
Sbjct: 914 AWTSGTKTPYDSSSGFGGSSTSGFDAFAAGSRTPAYPGGGSRTPAWAPGSAAPPPIGHSS 973
Query: 644 --SRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST----YVNAPSPYLPSTPGGQPMTPN 697
+Y+APTP + +++ G Y A TP +++T NAP+P P TP+
Sbjct: 974 GSKSSYDAPTPSTDYSAPTPGPYGGAPTPGATAATPHGWADNAPTPGAIHAP-----TPD 1028
Query: 698 SASYLPGTPG---GQPMTPGTGG---LDAMSPVIGA 727
++ Y G P GG DA +P +GA
Sbjct: 1029 ASGYSAKRTGELYDAPTPAAIGGGRPYDAPTPAMGA 1064
>gi|115397871|ref|XP_001214527.1| hypothetical protein ATEG_05349 [Aspergillus terreus NIH2624]
gi|114192718|gb|EAU34418.1| hypothetical protein ATEG_05349 [Aspergillus terreus NIH2624]
Length = 1075
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 245/818 (29%), Positives = 381/818 (46%), Gaps = 116/818 (14%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ GS I+ + A + + YIY+EA ++A V EA + + N+Y + KV+L
Sbjct: 260 IQKRIEERPPGSRNPIKIISAFERGGAMSGYIYVEARRQADVLEALQDMSNVYPRSKVIL 319
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP+REM D+L V+ K+ +L WVR+K G Y+GDLA++ +V+ VTV+L+PR+D
Sbjct: 320 VPVREMPDLLRVQ-KSEELMPGGWVRIKRGRYQGDLAQIEEVETNGLAVTVRLVPRLDY- 377
Query: 114 ALANKLEGREVAKKK------PFV--PPPRFMNVDEARELHIRVERRRDPMTGDYFENIG 165
L V K+ P V PP R + EA++ H + + G + +G
Sbjct: 378 GLNEDTSAPVVDSKRKRPGMNPAVARPPQRLFSESEAKKKHAKYLSATSSLGGKSWNYMG 437
Query: 166 GMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANR-KKG 222
F +GFL K + ++ + +N+ P +E+ F E+G S D+ASL+ N+ +
Sbjct: 438 DTYF-EGFLIKDMKVQHLITKNVNPRLEEVTMFARGSEDGTSNLDLASLAETLKNQTAED 496
Query: 223 HFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLA-VNSKELCKYFEPGNH 281
++ GD V V +G+ + L G + V ++ L L K L K F G+H
Sbjct: 497 SYLPGDPVEVFRGEQQGLIGRTSSTRGDIVTVQVTEGDLAGQLIDAPVKTLRKRFREGDH 556
Query: 282 VKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYE 339
VKV+ G++ GMV++V+ + +LSD + ++I VF+ D+ S+E TG+ K+G ++
Sbjct: 557 VKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLRLSAE--TGVDGKLGMFD 614
Query: 340 LRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRNK 397
+ DLV LD ++ I++V+ E+ +VL + V ++ K+ + + DRN
Sbjct: 615 VHDLVQLDASTVACIVKVDRESLKVLD---QNGSIRTVLPTQVTNKITPRRDAVATDRNG 671
Query: 398 NTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRA 457
+ D VR V G + + G + HI+R LF+H++ E++G I ++++ V V S
Sbjct: 672 AEIRHGDTVREVYG--EQRSGVILHIHRSFLFLHNKAQAENSGIIVVRTTNVVTV--SAK 727
Query: 458 NGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGP 517
G G ++ N P G P AGG G D ++G TV VR GP
Sbjct: 728 GGRSTGPDLTKMN-----------PALMRNGMPGAGGMGPPKTFGRDRMIGKTVMVRKGP 776
Query: 518 YKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETP--- 574
+KG G V D RVEL S+ K+V++ + ++ VS D+ R GS P
Sbjct: 777 FKGLVGIVKDSSDAQARVELHSKNKLVSIPKEILVVKDPVSGATVDSSRGKGGSRVPYGA 836
Query: 575 --------MHPSRTPLHP--YMTP---MRDAGATPIHDGM---RTPMR----DRAWNPY- 613
RTP+ TP M + TP GM RTP R NPY
Sbjct: 837 SSGAASSGWQGGRTPMAASGSRTPAWGMSSSARTPAWAGMGGARTPAWKMDGSRTSNPYD 896
Query: 614 --------------TPM--SPPRDNWEDGNPGS-------------W----GTSPQYQPG 640
TP + R ++ G S W G +P + G
Sbjct: 897 GNRTAYGGFASGSRTPAWNAGARTPYDSGAGSSGFDAFAAGSRTPAWHASGGRTPAWSAG 956
Query: 641 SPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPS-TPGGQP-MTPNS 698
+ S + PG A TPGGNYS A TP Y +AP+P + + TPG P P
Sbjct: 957 ATASNG--SKDPGDYDAPTPGGNYS-APTP----GAYASAPTPGMSAPTPGAWPDSAPTP 1009
Query: 699 ASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMP 736
++ TPGG P DA +P P+ P
Sbjct: 1010 GAFNAPTPGG----PSKRAYDAPTPAAWDSGSRPYDAP 1043
>gi|403368039|gb|EJY83850.1| Transcription elongation factor SPT5 [Oxytricha trifallax]
Length = 802
Score = 231 bits (590), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 184/665 (27%), Positives = 304/665 (45%), Gaps = 78/665 (11%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M K ID +G L I SV + ++ +IY+EA KE HVKEA GL I K +L+
Sbjct: 170 MNKSIDFARRGKHLSILSVTCTEKVEGFIYVEAFKEIHVKEAIVGLSVILGGKCLLIQKE 229
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
EM + + + I+L WVR K G Y GDL V V +V ++LIPR+D
Sbjct: 230 EMPGLYQNDKQTINLQIHQWVRPKQGLYGGDLGLVEAT--VDDKVYLRLIPRLDFSKDQL 287
Query: 118 KLEGREVAKKKPFV---PPPRFMNVDEARELHIRVERRRDPMTGD-YFENIGGMLFKDGF 173
+GR+ K F P R N ++ + E R+ P G+ F+ K+GF
Sbjct: 288 NGKGRDDKAKNKFSNQRPSQRIFNKSLVPQMSL--EHRQIPALGNKTFDVYKKQYLKNGF 345
Query: 174 LYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRK--KGHFM------ 225
LYK+ K + N++PT +E+++F + ++ + DI + + + FM
Sbjct: 346 LYKSFPSKQLQIDNVRPTIEEVQQFTSYMKSSKDDINQIDETITGEELIRKTFMQGSSSD 405
Query: 226 --KGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVK 283
KGD + V+KGDL L G V ++ +V +P ++G L + + K+FEPG+ V+
Sbjct: 406 INKGDKIRVVKGDLNGLYGQVVTIEGSDVLFKPTIEGFEDDLRLPMDFVVKHFEPGDQVR 465
Query: 284 VVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGI---------TK 334
V+ G G TG+V+ E + ++R+FA+ + SE+ G+
Sbjct: 466 VIDGKFKGETGIVISSETQFANVALTQNNREVRIFANSLKLKSEIDQGVLGMTGYIDKKN 525
Query: 335 IGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQD 394
Y DL++ + GV+++V+ + +V+ D + L + + K +K+ D
Sbjct: 526 FSKYSANDLIMYNTKYVGVVLQVQDDYLKVINNEGDLQNIKLSDINK-KIDFSRKTTTVD 584
Query: 395 RNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
++NT+ +VVR+ G KG++G V++I++ LF+ D+ + G + + V++
Sbjct: 585 SHRNTLYADNVVRMTNGKYKGRKGVVKYIFKTTLFLWDKEFYQSNGIFVENARNVVIL-- 642
Query: 455 SRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVR 514
GD + + N +GG A R D G +++
Sbjct: 643 --------GDEHMKQN----------------QGGAVANSNRR----FRDVWAGKEIEIT 674
Query: 515 LGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISD-NVVVSTPYRDTPRYG----- 568
G +KGYRGRV + VEL S+ + + ++ S+I + +V S R YG
Sbjct: 675 KGEWKGYRGRVCRADDRQAIVELSSKCRKIPIEISLIKEVDVGKSGTTRGDMTYGGQTVY 734
Query: 569 MGSETPMH---PSRTPLHPYMTPMRDAGATPIHD----GMRTPMRDRAWN---PYTPMSP 618
+TPM PS P P+ + G +D GM +P RA + P P +P
Sbjct: 735 EAGKTPMQYNTPSYYPHSPHWGANQSPGYGTDYDYNNAGM-SPGFSRAGSEHYPNKPQTP 793
Query: 619 PRDNW 623
DNW
Sbjct: 794 RNDNW 798
>gi|388581314|gb|EIM21623.1| transcription elongation factor Spt5, partial [Wallemia sebi CBS
633.66]
Length = 1221
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 204/744 (27%), Positives = 341/744 (45%), Gaps = 75/744 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS-----QKVMLVPIREMTDVLAV 65
L+I S D ++ Y+EA +HV EA KGL +YS +K +L+P+ EM D+L +
Sbjct: 215 LEIYSAFCRDSIQGLFYVEARSPSHVLEAVKGLVGVYSSSAPDRKPLLIPVDEMADLLKI 274
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVA 125
+ + ++ +WVR+K G Y+GDLA+V+D+ + VK +PRIDL +
Sbjct: 275 KKQVKEVKPGSWVRIKRGKYQGDLAQVMDITENGEVAGVKFVPRIDLNPKEDSTSAGAAG 334
Query: 126 KKK--------PFVPPPRFMN-VDEARELHIRVERRRDPMTGD--YFENIGGMLFKDGFL 174
KK+ F PP R N D R R +R GD F+N F+DG L
Sbjct: 335 KKRKKGANSTVSFRPPQRLYNHADIVRVYGSRTSVKR----GDKYVFQND---TFRDGLL 387
Query: 175 YKTVSMKSISAQNIQPTFDELEKFRTPGENGES----DIASLSTLFANRKKGHFMK-GDA 229
K +++ + +++ P DE+ KF + +NGE+ DI A ++ ++ GD
Sbjct: 388 EKDITISGLQTEDVNPQIDEITKFAS--QNGETSSGGDIDLNMMADAVKQSAAILQPGDV 445
Query: 230 VIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGT 288
V + +G L + G + + + V I+ + + + V S+ + K F G+H+KV++G
Sbjct: 446 VEIFEGQLTGISGSIVALRGDVVTIKANVDEYSNQHIEVLSRSVRKTFSTGDHIKVINGK 505
Query: 289 QAGATGMVLKVEQH--VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL 346
TG+V+ + + + +SD +++++ VF+ D+ ++E+ +G+YEL DLV L
Sbjct: 506 YTDETGLVISINEKDSTVTFISDMSQDELSVFSKDIRVAAEIGAAHNTVGNYELHDLVQL 565
Query: 347 DNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDV 405
D + GVI + E F+VL V V R+I + + + V D + + + D+
Sbjct: 566 DQQTAGVIFKTEHNQFKVLD---HNGNVRTVGPRQISMRRDSRRAVATDSENHDLRIGDM 622
Query: 406 VRIVEGPCKGKQGPVEHIYRGI-LFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD 464
V+ ++G + ++G V HI+R + +F+++R E+ G +S+ V N
Sbjct: 623 VKEIQG--EQRKGQVLHIHRSVFIFLYNREISENNGVFITRSTMLASVAPKTLNNS---- 676
Query: 465 AYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGR 524
S S P SP + +GG G G+G D L V++ G YKG G
Sbjct: 677 --SVDLSQMNPAMSSISPQQREKGG--MVGSQMLGKGMRDKLADIPVQIIRGSYKGMIGV 732
Query: 525 VVDVKGQSVRVELESQMKVVTVDRSMI----SDNVVVSTPYRDTPRYGM--GSETPMHPS 578
+ G +R+EL + K++++++ M ++ +V Y PR G HP
Sbjct: 733 IKGTNGNQIRIELTTNSKIISLEKEMCMRRHNNQLVSLDTYVGPPRNQQNGGDRFGAHPR 792
Query: 579 RTPLHP--YMTPMRDAGATPIHDGMRTPMRDRAWNPYTP--MSPPRDNWEDGNPGSWGTS 634
+ + TP ATP G +TP P+ +P W G+ +
Sbjct: 793 DSSMASGGGATPRGYGNATPWQGGGKTPFGQGGATPWGAGGRTPAAGAWAAGS-----KT 847
Query: 635 PQYQPGSPPSRAYEAPTPGSG-WAS---TPGGNYSDAGTPRDSSSTYVNAPSPY-----L 685
P + G+ P A TP +G WA+ TPG TP + A +
Sbjct: 848 PGVRGGATPGWGAGARTPAAGAWAAGSKTPG--VRGGATPGWGAGARTPAAGAWGAGSKT 905
Query: 686 PSTPGGQPMTPNSASYLPGTPGGQ 709
PS G TP A++ TPG Q
Sbjct: 906 PSWNAGS-KTPGGAAWGNNTPGQQ 928
>gi|225679792|gb|EEH18076.1| transcription elongation factor spt5 [Paracoccidioides brasiliensis
Pb03]
Length = 1085
Score = 231 bits (589), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 222/762 (29%), Positives = 374/762 (49%), Gaps = 78/762 (10%)
Query: 1 MQKCIDK--GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLV 54
M++ D+ GS IR + A + + YIY+EA ++A V +A + + N+Y++ K++L+
Sbjct: 247 MKRIEDRPPGSRRPIRIMSAFERGGTMSGYIYVEARRQADVIDALEDMSNVYTKSKMILI 306
Query: 55 PIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID--L 112
++EM D+L V +K+ +L WVR+K G Y+GDLA++ DV+ VTV+L+PR+D L
Sbjct: 307 SVKEMPDLLRV-TKSEELVPGGWVRIKRGKYQGDLAQLEDVETNGLDVTVRLVPRLDYGL 365
Query: 113 QALANKLEGREVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGG 166
+ G + +K+P V PP R + EA++ H + + G + +G
Sbjct: 366 NEDMSAPNG-DAKRKRPGVNNAIARPPQRPFSETEAKKKHAKYLSATSGLGGKTWNYLGD 424
Query: 167 MLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANR---KKGH 223
+ DGFL K + ++ + +N+ P DE+ KF ++G +++ + + + +
Sbjct: 425 N-YVDGFLIKDMKVQHLITKNVNPQLDEVTKFARGADDGTANLDLAALAASLKDTTSEDS 483
Query: 224 FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + + G + V I+ E++G + + V K L K F+ G+
Sbjct: 484 YLPGDTVEVFQGEQQGVVGRTVSTRGDIVSIKVTEGELEG--QQIDVPIKGLRKRFKEGD 541
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDY 338
HVKV+ G++ GMV++++ + +LSD ++I VF+ D+ E+++ G+ K+G Y
Sbjct: 542 HVKVIGGSRFRDELGMVVRIKDDRVTLLSDMNMQEITVFSKDIREAADA--GVDGKLGMY 599
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRN 396
++ DLV LD + G II+++ E+ +VL + V ++ K+ ++ N DRN
Sbjct: 600 DVHDLVQLDQATVGCIIKLDRESMRVLD---QNGSIRNVLPSQVMNKINQRRNAVSTDRN 656
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ + D VR + G + + G + HI+R LF+++R +++AG I ++S+ + S
Sbjct: 657 GSEIRCGDTVREITG--EQRTGVILHIHRSFLFLNNRDAIDNAGIIVTRASNVNTIATSG 714
Query: 457 AN-GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRL 515
G R+ +SR N P + Q G G PP G D +G TV +R
Sbjct: 715 GRLGSRSAPDFSRMN-----PAL-QKNGMNGNGMPPPKSF------GSDRAIGKTVTIRR 762
Query: 516 GPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPM 575
GP+KG G V D RVEL S+ KVVTVD+ M+S ++ D R+G
Sbjct: 763 GPFKGLLGIVKDTTETQARVELHSKNKVVTVDKDMLSMKDPITGASIDMSRFGGRGGGRA 822
Query: 576 HPSRTPLHPYMTPMRDAGA-TPI--HDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWG 632
+ + P AG+ TP+ +D RTP AW + +P W S
Sbjct: 823 GRGSSTYNASAAPPDWAGSRTPMAANDSSRTP----AWRSSSSRTPA---WNAAAASSSR 875
Query: 633 TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQ 692
T GS S Y+ G GG +S + TP ++ T +PY S+ G
Sbjct: 876 TPAWKADGSRTSNPYDGNRTAYG-----GGTFSGSRTPAWTAGTK----TPYDSSS--GF 924
Query: 693 PMTPNS-------ASYLPGTPGGQ-PMTPGTGGLDAMSPVIG 726
++ NS S P PGG TP G A P +G
Sbjct: 925 GVSSNSGFDAFAAGSRTPAYPGGTGSRTPAWGPGSAAPPPVG 966
>gi|226291548|gb|EEH46976.1| transcription elongation factor spt5 [Paracoccidioides brasiliensis
Pb18]
Length = 1085
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 222/762 (29%), Positives = 374/762 (49%), Gaps = 78/762 (10%)
Query: 1 MQKCIDK--GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLV 54
M++ D+ GS IR + A + + YIY+EA ++A V +A + + N+Y++ K++L+
Sbjct: 247 MKRIEDRPPGSRRPIRIMSAFERGGTMSGYIYVEARRQADVIDALEDMSNVYTKSKMILI 306
Query: 55 PIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID--L 112
++EM D+L V +K+ +L WVR+K G Y+GDLA++ DV+ VTV+L+PR+D L
Sbjct: 307 SVKEMPDLLRV-TKSEELVPGGWVRIKRGKYQGDLAQLEDVETNGLDVTVRLVPRLDYGL 365
Query: 113 QALANKLEGREVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGG 166
+ G + +K+P V PP R + EA++ H + + G + +G
Sbjct: 366 NEDMSAPNG-DAKRKRPGVNNAIARPPQRPFSETEAKKKHAKYLSATSGLGGKTWNYLGD 424
Query: 167 MLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANR---KKGH 223
+ DGFL K + ++ + +N+ P DE+ KF ++G +++ + + + +
Sbjct: 425 N-YVDGFLIKDMKVQHLITKNVNPQLDEVTKFARGADDGTANLDLAALAASLKDTTSEDS 483
Query: 224 FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + + G + V I+ E++G + + V K L K F+ G+
Sbjct: 484 YLPGDTVEVFQGEQQGVVGRTVSTRGDIVSIKVTEGELEG--QQIDVPIKGLRKRFKEGD 541
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDY 338
HVKV+ G++ GMV++++ + +LSD ++I VF+ D+ E+++ G+ K+G Y
Sbjct: 542 HVKVIGGSRFRDELGMVVRIKDDRVTLLSDMNMQEITVFSKDIREAADA--GVDGKLGMY 599
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRN 396
++ DLV LD + G II+++ E+ +VL + V ++ K+ ++ N DRN
Sbjct: 600 DVHDLVQLDQATVGCIIKLDRESMRVLD---QNGSIRNVLPSQVMNKINQRRNAVSTDRN 656
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ + D VR + G + + G + HI+R LF+++R +++AG I ++S+ + S
Sbjct: 657 GSEIRCGDTVREITG--EQRTGVILHIHRSFLFLNNRDAIDNAGIIVTRASNVNTIATSG 714
Query: 457 AN-GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRL 515
G R+ +SR N P + Q G G PP G D +G TV +R
Sbjct: 715 GRLGSRSAPDFSRMN-----PAL-QKNGINGNGMPPPKSF------GSDRAIGKTVTIRR 762
Query: 516 GPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPM 575
GP+KG G V D RVEL S+ KVVTVD+ M+S ++ D R+G
Sbjct: 763 GPFKGLLGIVKDTTETQARVELHSKNKVVTVDKDMLSMKDPITGASIDMSRFGGRGGGRA 822
Query: 576 HPSRTPLHPYMTPMRDAGA-TPI--HDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWG 632
+ + P AG+ TP+ +D RTP AW + +P W S
Sbjct: 823 GRGSSTYNASAAPPDWAGSRTPMAANDSSRTP----AWRSSSSRTPA---WNAAAASSSR 875
Query: 633 TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQ 692
T GS S Y+ G GG +S + TP ++ T +PY S+ G
Sbjct: 876 TPAWKADGSRTSNPYDGNRTAYG-----GGTFSGSRTPAWTAGTK----TPYDSSS--GF 924
Query: 693 PMTPNS-------ASYLPGTPGGQ-PMTPGTGGLDAMSPVIG 726
++ NS S P PGG TP G A P +G
Sbjct: 925 GVSSNSGFDAFAAGSRTPAYPGGTGSRTPAWGPGSAAPPPVG 966
>gi|320581144|gb|EFW95366.1| Transcription elongation factor spt5 [Ogataea parapolymorpha DL-1]
Length = 933
Score = 228 bits (582), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 211/740 (28%), Positives = 329/740 (44%), Gaps = 109/740 (14%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAV-ESKAID 71
+ S D+ Y+YIEA + V + +GL +Y+ +LVPI E D+L S +
Sbjct: 213 VFSAFQRDNFSGYVYIEARRLDAVNQIIQGLPGMYANNKVLVPIEEYPDLLRPGRSNEVQ 272
Query: 72 LSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL---QALANKLEGREVAKKK 128
L ++VR+K+G YKGDL V ++ V VKL+PR+D Q + +GR
Sbjct: 273 LQPGSYVRIKVGKYKGDLGIVDNLAENDLEVRVKLVPRLDYGKSQGSLDSGKGRRGPASS 332
Query: 129 PFVPPPRFMNVDEARE---LHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISA 185
F PP R + EA + H+ RR G Y F DGFLYK V ++ +
Sbjct: 333 KFRPPQRLFSEIEASQNDPEHLSTARRE---RGYYIYR--NEEFIDGFLYKDVKIQQVET 387
Query: 186 QNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGDLKNLKGW 243
+N++PT EL F + + D+ S+++ A+ K F D V ++ G+ +KG
Sbjct: 388 RNVKPTLHELTLFNSGSSSEGIDLQSIASSLKDASDKAIVFQPDDRVEIVSGEQAKMKGK 447
Query: 244 VEKVDEENVHIRPEMKGLPKTLAVNS------KELCKYFEPGNHVKVVSGTQAGATGMVL 297
V E + R +++G NS L K F PG+HV V+ G + +G+++
Sbjct: 448 VVSAPEAKI-ARVQLEGNDDREVNNSIVEVPTSTLRKIFLPGDHVTVIYGVHSNESGLIV 506
Query: 298 KVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRV 357
KVE++ + ++SD TK+DI VF + +++S + +T T+ G +EL LV L++ S G++IR
Sbjct: 507 KVEENQVTLVSDQTKKDITVFPNYLMKSIDSSTNSTQTGAFELFQLVKLNSQSVGMVIRA 566
Query: 358 ESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ---DRNKNTVAVKDVVRIVEGPCK 414
E E F VL V V+ + I+ LE + DRN +AV DVV+ V G +
Sbjct: 567 EKEVFTVL---CTDGRVVKVEPKAIQSPLELNKMTEKTTDRNGLEIAVGDVVKEVSG--E 621
Query: 415 GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT 474
++G + HIY LF+ ++ +E+ G I ++ V + S ++ +
Sbjct: 622 RREGNIVHIYLSHLFLKSKNVIENNGIIVVDATEVQTV----------SNKGSILSTFKA 671
Query: 475 PPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
P +P R PPA GG D + V VR GPYKG +G V D G+ R
Sbjct: 672 PDLNKMNPDRLMP--PPAAPIVASKFGGRDITLNQNVSVRKGPYKGKKGIVKDANGEVAR 729
Query: 535 VELESQMKVVTVDRSMI-----------------------------SDNVVVSTPYR--- 562
VE+ + K++ +++S + S P+R
Sbjct: 730 VEMHNPAKIIPINKSDLLFETRPGQFVPYEQYMENYRGRRPGAAFSSGGAPNGGPFRGNG 789
Query: 563 -----------------DTPRYGMGSETPMHPS--RTPL--HPYMTPMRDAGA-TPI-HD 599
TP +G G +TP S +TP + TP +G TP+ +
Sbjct: 790 PELGPGGGRTPAWGSGGKTPAWGSGGKTPAWGSGGKTPAWGNGGKTPSWGSGGKTPVWNS 849
Query: 600 GMRTPMRDR-----AWN-----PYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYE- 648
G +TP + AWN P W DG+ WG +QP + R E
Sbjct: 850 GGKTPAWNSGAKTPAWNSGGKTPAWNSGGKTPAWNDGSGSVWGGRSAWQPDTETPRENEW 909
Query: 649 --APTPGSGWASTPGGNYSD 666
+P G A TP + D
Sbjct: 910 GVSPAVGDWTAPTPAKDDDD 929
>gi|212540742|ref|XP_002150526.1| transcription initiation protein spt5 [Talaromyces marneffei ATCC
18224]
gi|210067825|gb|EEA21917.1| transcription initiation protein spt5 [Talaromyces marneffei ATCC
18224]
Length = 1021
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 233/784 (29%), Positives = 361/784 (46%), Gaps = 93/784 (11%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ G+ ++ + A + + Y+YIEA ++A V EA GL ++Y + K++L
Sbjct: 227 IQKRIEQRPPGTRHGLKIISAFERGKTMTGYVYIEARRQAEVMEALDGLLDVYPKTKMVL 286
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP++EM D+L V+ K+ +L+ WVR+K G Y+GDLA++ +V+ VTV+L+PR+D
Sbjct: 287 VPVKEMPDLLRVK-KSEELNPGDWVRIKRGKYQGDLAQIEEVETNGLEVTVRLVPRLDY- 344
Query: 114 ALANKLEGREVAKKKPF--------VPPPRFMNVDEARELHIRVERRRDPMTGDYFENIG 165
L L K+K F PP R + EA + H R ++G + N
Sbjct: 345 GLNEDLSAPADVKRKRFGAANNTAARPPQRLFSEAEASKKHGRHLVGTSNLSGKSW-NYM 403
Query: 166 GMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANR-KKG 222
G + DGFL K + ++ + N+ P +E+ F E+G + D+ASL+ N +
Sbjct: 404 GDTYVDGFLVKEMKIQHLITTNVNPRLEEVTMFARGSEDGTANIDLASLANTLKNTVAED 463
Query: 223 HFMKGDAVIVIKGDLKNLKGWVEKVDEENVHI---RPEMKGLPKTLAVNSKELCKYFEPG 279
+ GD V V KG+ + + G + + + +MKG + + K L K F G
Sbjct: 464 AYRPGDQVEVYKGEQQGIIGKTVATRGDIITLEVTEGDMKG--QVIDAPIKTLRKRFREG 521
Query: 280 NHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGD 337
+HVKV+ G++ GMV++V+ + ILSD + E+I VF+ D+ S+E +G+ K+G
Sbjct: 522 DHVKVIGGSRYQDELGMVVQVKGDSVTILSDMSMEEITVFSKDLRLSTE--SGVDGKLGT 579
Query: 338 YELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSN--VQDR 395
+++ DLV LD + II+V+ E+ +V+ V V I K+ K+ + DR
Sbjct: 580 FDVHDLVQLDATTVACIIQVDRESLRVID---QNGSVRNVLPSRIASKIAKRKDAVATDR 636
Query: 396 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGS 455
N + D VR + G + + G + HI+R LF+H++ E+ G I ++S+ V V S
Sbjct: 637 NGAEIRHGDTVREMYG--EQRSGVIMHIHRSFLFLHNKAQAENTGVIVVRTSNVVTV--S 692
Query: 456 RANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRL 515
G G SR N P I Q PP GG R G D L+G TV +
Sbjct: 693 AKGGRATGPDLSRMN-----PAIMQR--------PPQGGAMPPPRAGRDRLIGKTVGITK 739
Query: 516 GPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS--MISDNVVVST-------------- 559
G YKG G V + VRVEL ++ V V R+ ++ D + T
Sbjct: 740 GSYKGLIGIVRETTEDLVRVELHTKGTKVMVPRTGVVVKDPITGQTIDMGRGGRPRVPGG 799
Query: 560 -PYRDTPRYGMGSETPMHP--SRTPLHPYMTPMRD-AGATPIHDGMRTPMRDRAWNPYTP 615
P + GS TPM SRTP R A G RTP AW
Sbjct: 800 PGGPPQPNWA-GSRTPMASLDSRTPAWGGSLSSRTPAWGGSAASGSRTP----AWKADGS 854
Query: 616 MSPPRDNWEDGNPGSWGT---SPQYQPGSPPSRAYEAPTPGS---GWAS-----TPGGNY 664
+ G +W + +P ++A GS W + TP
Sbjct: 855 RTAYGGAMGGGRTPAWNSGARTPYDSGSGGSGGGFDAFAAGSRTPAWGAATGSRTPAWTA 914
Query: 665 SDAGTPRDSSST-YVNAPSP---YLPSTPGGQPMTPN-SASYLPGTPGGQPMTPGTGGLD 719
+ P +++T +AP+P Y TPG P P AS TP P G L+
Sbjct: 915 NSNSAPSAAANTGRYDAPTPGGDYSAPTPGAYPTAPTPGASGTASTPRWAESAPTPGALN 974
Query: 720 AMSP 723
A +P
Sbjct: 975 APTP 978
>gi|345571280|gb|EGX54094.1| hypothetical protein AOL_s00004g127 [Arthrobotrys oligospora ATCC
24927]
Length = 1092
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 237/835 (28%), Positives = 378/835 (45%), Gaps = 140/835 (16%)
Query: 1 MQKCID-KGSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQKVM-LVP 55
M+K D KG+ + + L+ ++ +IY+EA ++A V A + N+Y++ M LVP
Sbjct: 226 MKKVQDMKGTRNALNIISVLERGQSMQGFIYVEARRQADVLTALTNIPNVYARSGMILVP 285
Query: 56 IREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL 115
+ EM D+L V+ KA +++ T+VR K G Y+GDLA+VVDV+ Q + ++ +PRID A
Sbjct: 286 VDEMPDLLRVQKKA-EITPGTFVRFKRGKYQGDLAQVVDVEQSGQILNIRAVPRIDYGAR 344
Query: 116 ANKLEGREVAKKK--PFVPPPRFMNVDEARELHIR--VERRRDPMTGDYFENIGGMLFKD 171
+ + K+ PP R + EAR+ H R RR N G ++
Sbjct: 345 DDGTDASGKRKRSVGAVRPPQRLFSEAEARKYHERDLTSTRRG------IFNFQGDTYEG 398
Query: 172 GFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES-DIASLSTLF--ANRKKGHFMKGD 228
G+L K V + ++ +N+ P +E+ KF + G+ ES D+ +LS + K + GD
Sbjct: 399 GYLVKDVRVTALQLENVNPKLEEVTKFASTGDGNESLDLQALSQSLKASTDKYAPYQPGD 458
Query: 229 AVIVIKGDLKNLKGWVEKVDEENVHIRPE---MKGLPKTLAVNSKELCKYFEPGNHVKVV 285
V V G+ + G V +V + V + + +KG K + V K L K F+ G+HVKV+
Sbjct: 459 MVEVYAGEQAGMVGKVTRVRADIVSMNVQEGPLKG--KDIDVPFKGLRKRFKEGDHVKVM 516
Query: 286 SGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLV 344
G++ GMV+K+ + LSD + +I VF+ D+ E+S+ T G Y+L DL+
Sbjct: 517 GGSRYRDEVGMVVKIVDDRVTFLSDLSMGEITVFSRDLREASDSGGMGTAAGKYDLWDLI 576
Query: 345 LLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKL-REIKCKL---EKKSNVQDRNKNTV 400
L+ + +I+++ E+ +VL D+ L ++ K+ K + DRN + +
Sbjct: 577 QLNATTVACVIKIDRESLKVL----DQEGATRTILPSQVAAKIPPRRKDAVATDRNGSDI 632
Query: 401 AVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRH-HLEHAGFICAKSSSCVVVGGSRANG 459
V+D V+ + G + + G + H+YRG FIH + E G A++++ +
Sbjct: 633 RVEDTVKEIAG-GENRSGVIHHLYRGFAFIHSKELQGETGGIFVARTNNLATMIA----- 686
Query: 460 DRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYK 519
+ G S L P + + PG PP R +GG D ++G TV VR GPYK
Sbjct: 687 -KGGRVASSGPDLSKMPEMSKKPG--GNMAPPIIPR----QGGRDRILGQTVHVRQGPYK 739
Query: 520 GYRGRVVDVKGQSVRVELESQMKVVTVDRSMI-----SDNVVVSTPYRDTPRYGM----- 569
G G V D + R+EL S+ K +T+++ + + ++S P+ G
Sbjct: 740 GLLGIVKDATDTTARIELHSKNKTITIEKMKLGFKEGATGRILSYAEFVQPKKGFGDRGS 799
Query: 570 -----------------GSETPMHP-----SRTPLHPYM--------------------T 587
GS TP SRTP + T
Sbjct: 800 NTSYSSGNSSAGGNSWSGSRTPAGSSAWAGSRTPAGAHGGSGGGGRTPAWAGGAGDGGRT 859
Query: 588 PMRDAGA-TPIH---DGMRT--PMRD--RAWNPYTPMSPPRDNWEDGNPG---------- 629
P +G+ TP + DG RT P +D R NPY S D + N G
Sbjct: 860 PAWASGSKTPAYGANDGSRTSDPYKDGSRTSNPYRDGSRTSDPYRGDNDGSRTSYGQPVG 919
Query: 630 ----SWGTSPQYQPGS-PPSRAYEAPTP---GSGWAS---TPGGNYSDAG-----TPRDS 673
S G +P + PG+ P P P G+ W S TP + S + ++
Sbjct: 920 ASGASGGRTPAWNPGNRTPHYGSGEPGPRDSGTAWDSGSKTPARSLSSVNDQWNDSYGNN 979
Query: 674 SSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMT-PGTGGLDAMSPVIGA 727
SST P+ Y ++P S Y TPG ++ P GGL A +P + A
Sbjct: 980 SSTTARTPAGYSATSP------EFSGGYTAATPGASGLSAPTPGGLSAPTPPVSA 1028
>gi|156057685|ref|XP_001594766.1| hypothetical protein SS1G_04574 [Sclerotinia sclerotiorum 1980]
gi|154702359|gb|EDO02098.1| hypothetical protein SS1G_04574 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1084
Score = 228 bits (582), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 232/801 (28%), Positives = 366/801 (45%), Gaps = 125/801 (15%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K +IY+EA ++A + A GL N+Y + K+ LV I+EM D+L V +K+ + +VR+
Sbjct: 284 MKGFIYVEAQRQADILTAMDGLMNVYPRTKMQLVEIKEMPDLLRV-TKSPTVEVGAYVRL 342
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRID--LQALANKLEGREVAKKKPFV---PPP 134
+ Y GDLA+V++V + + V+ +PR+D L N ++G+ +K+P PP
Sbjct: 343 RRPAKYAGDLAQVMEVTDTGLELRVRYVPRLDYGLHEDTNVVDGK---RKRPVAGPRPPQ 399
Query: 135 RFMNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
R + EA++ H + ++ R D T +YF + +G+ K V ++++ +++ PT +
Sbjct: 400 RLFSEAEAKKRHAKHLQGRPDTKTWNYFNE----EYINGYCEKEVKIQALITKDVNPTLE 455
Query: 194 ELEKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEE 250
E+ +F + E+G ++ A ++L A+ ++ GD + V +G+ K + G V +
Sbjct: 456 EVTRFASGAEDGTENLDLNALAASLKASTANASYLPGDVIEVYEGEQKGVVGKAVSVTGD 515
Query: 251 NVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILS 308
V + L +T+ + K L K F G+HVKV+ G++ GMV+K+ + + +LS
Sbjct: 516 IVTMAVSEGALKGQTIEIPIKGLRKRFREGDHVKVIGGSRFRDEVGMVVKIIEDRVTLLS 575
Query: 309 DTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGV 368
D +I VF+ D+ E+S+ + G +G YEL DLV LD ++ G II+V+ E+ VL
Sbjct: 576 DQGNNEITVFSKDLREASD-SGGSGALGKYELWDLVQLDPSTVGCIIKVDRESLVVLD-- 632
Query: 369 PDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRG 426
V +I KLEK+ N DRN + ++D V+ G +G+ G + HI+R
Sbjct: 633 -QNGSNRTVIPSQISNKLEKRRNAVATDRNGAEIKMEDGVKEFGG--EGRAGKILHIHRA 689
Query: 427 ILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYS 486
LF+ E+AG A+++S V S G G+A S + P + +P
Sbjct: 690 YLFLKSSELTENAGVFVARTTSVQSV--SAKGGRIAGNASSSPDLSSMNPAMKLNPKNNG 747
Query: 487 RGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTV 546
+ PP G D +G TV +R GPYKG G V D + RVEL ++ KV++V
Sbjct: 748 QMLPPK-------SFGRDKSIGQTVTIRKGPYKGLLGIVKDTTDTNARVELHTKSKVISV 800
Query: 547 DRSMISDNVVVSTPYRD--------------------------TP----RYGMGSETPM- 575
+ + VS D TP G G TPM
Sbjct: 801 PKDCLGFKDKVSGASIDPSGFRGGPGGGRGGGAPRGRGGFGGATPGPGWDAGAGGRTPMP 860
Query: 576 --HPSRTPLH--------------PYMTPMRDAGATP-----------IHDGMRTPM--- 605
P RTP + + D G TP +DG RT
Sbjct: 861 GGLPERTPAWGRTPHGGGQGGRTPAWKSGATDGGRTPGWANDGSRTVYANDGSRTAYGGG 920
Query: 606 -RDRAWN--PYTPMSPPRDNWEDGNPG---------SWGT-SPQYQPGSPPSRAYEAPTP 652
R AW+ TP DN+ P +WG+ +P YQP + P+
Sbjct: 921 NRTPAWSSGAKTPAYGLSDNFGSKTPAYGGSGSSGDAWGSKTPAYQPNNSNDNWNSGPSN 980
Query: 653 GSGWAS-----TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPM-TPNSASYLPGTP 706
+ W S TPGG S A TP +NAP+P S P M P +Y TP
Sbjct: 981 NNNWGSAYDAPTPGGPLS-APTP-----AAMNAPTPGGYSAPTPAAMNAPTPGAYSAPTP 1034
Query: 707 G-GQPMTPGTGGLDAMSPVIG 726
G P +DA +P G
Sbjct: 1035 APGYWGAPTPQAMDAPTPGQG 1055
>gi|121707137|ref|XP_001271743.1| transcription initiation protein spt5 [Aspergillus clavatus NRRL 1]
gi|119399891|gb|EAW10317.1| transcription initiation protein spt5 [Aspergillus clavatus NRRL 1]
Length = 1045
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 236/798 (29%), Positives = 378/798 (47%), Gaps = 126/798 (15%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ GS ++ + A + + YIY+EA ++A V EA + + N+Y + K++L
Sbjct: 251 IQKRIEERPPGSRKPMKIISAFERGGAMSGYIYVEARRQADVMEALEDMSNVYPRTKMIL 310
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP+REM D+L V+ K+ +L+ WVR+K G Y+GDLA++ +VD VTV+L+PR+D
Sbjct: 311 VPVREMPDLLRVQ-KSEELNPGGWVRIKRGKYQGDLAQIEEVDTNGLEVTVRLVPRLDYG 369
Query: 114 ALANKLEGR-EVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGG 166
+ ++ +K+P + P R + EA++ H + + G + +G
Sbjct: 370 LNEDSSAPVVDIKRKRPGMNTAGPRAPQRLFSEAEAKKRHGKYLSATSGLGGKSWSYLG- 428
Query: 167 MLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKKGH 223
+ DGFL K + ++ + +N+ P +E+ F ++G S D+ASL+ TL + +
Sbjct: 429 ETYIDGFLIKDMKVQHLITKNVNPRLEEVTMFARGSDDGTSNLDLASLAETLKNSTAEES 488
Query: 224 FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + L G + V ++ E+ G +T+ K L K F G+
Sbjct: 489 YLPGDPVEVFRGEQQGLVGRTTSTRGDIVTLQVTEGELAG--QTIDAPVKSLRKRFREGD 546
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDY 338
HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+ S+E G+ K+G +
Sbjct: 547 HVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLRLSAEA--GVDGKLGMF 604
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRN 396
++ DLV LD ++ +++V+ E+ +VL + V ++ K+ + + DRN
Sbjct: 605 DVHDLVQLDASTVACVVKVDRESLRVLD---QNGSIRNVLPSQVANKITPRRDAVATDRN 661
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ D VR V G + + G + HIYR LF+H++ E++G + ++++ V V S
Sbjct: 662 GAEIRHGDTVREVYG--EQRSGVIAHIYRSFLFLHNKSQAENSGIVVVRTTNVVTV--SA 717
Query: 457 ANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLG 516
G G ++ N P + G P GR+R L+G TV+VR G
Sbjct: 718 KGGRSTGPDLNKMN----PAMMRNGMPGGGMGPPKTFGRDR--------LIGKTVQVRKG 765
Query: 517 PYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMH 576
PYKG G V D RVEL S+ K+VT+ + ++ V+ D R G G P
Sbjct: 766 PYKGLVGIVKDSTDMQARVELHSRNKLVTIPKEVLVVKDPVTGQTLDMSRKG-GQRAPYG 824
Query: 577 PSRTP---LHPYMTPM--RDAGATPIHDG---MRTPM-------RDRAW--------NPY 613
S P H TPM D+ TP G RTP R AW NPY
Sbjct: 825 ASAAPPSGWHGGRTPMAAADSSRTPAWGGASSARTPAWAGVGGSRTPAWKMDGSRTSNPY 884
Query: 614 --------------TP-----MSPPRDN------------------WEDGNPG----SWG 632
TP P D+ W N G +WG
Sbjct: 885 DGSRTAYGGGVGSRTPAWNAGARTPYDSGSGSSGFDAFAAGSRTPAWGGANAGGRTPAWG 944
Query: 633 TSPQYQPGSPPSRAY-EAPTPGSGWASTPGGNYSDAGTP---RDSSSTYVNAPSPYLPST 688
+ G SR Y +APTPG +++ G Y+ A TP DS+ T P Y T
Sbjct: 945 GAGSTAGGHKESREYADAPTPGGNYSAPTPGAYASAPTPGAWADSAPT----PGAYNAPT 1000
Query: 689 PGGQPMTPNSASYLPGTP 706
PGG P+S Y TP
Sbjct: 1001 PGG----PSSRPYDAPTP 1014
>gi|238491498|ref|XP_002376986.1| transcription initiation protein spt5 [Aspergillus flavus NRRL3357]
gi|220697399|gb|EED53740.1| transcription initiation protein spt5 [Aspergillus flavus NRRL3357]
Length = 895
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 237/823 (28%), Positives = 386/823 (46%), Gaps = 130/823 (15%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ GS ++ + A + + YIY+EA ++A V +A + + N+Y + K++L
Sbjct: 97 IQKRIEERPMGSRNPMKIISAFERGGAMSGYIYVEARRQADVMDALQDMSNVYPRTKMIL 156
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP+REM D+L V+ K+ +L WVR+K G Y+ DLA++ +V+ VTV+L+PR+D
Sbjct: 157 VPVREMPDLLRVQ-KSEELLPGGWVRIKRGKYQNDLAQIEEVETNGLAVTVRLVPRLDYG 215
Query: 114 ALANKLEGR---EVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENI 164
N+ G + +K+P + PP R + EA++ H + + G + +
Sbjct: 216 M--NEDIGAPFMDPKRKRPGMNPAVARPPQRLFSEAEAKKKHGKYLSATSGLGGKSWSYL 273
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKK 221
G + DGFL K + ++ + +N+ P +E+ F E+G + D+ASL+ TL + +
Sbjct: 274 G-ETYVDGFLIKDMKVQHLITKNVSPRLEEVTMFARGSEDGTANLDLASLAETLKNSTAE 332
Query: 222 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + L G + V ++ L + + K L K F G+
Sbjct: 333 DSYLPGDPVEVFRGEQQGLIGRTTSTRGDIVTLQVTEGDLAGQHIDAPVKSLRKRFREGD 392
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDY 338
HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+ S+E TG+ K+G +
Sbjct: 393 HVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLRLSAE--TGVDGKLGMF 450
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRN 396
++ DLV LD + I++V+ E+ +VL + + ++ K+ + + DRN
Sbjct: 451 DVHDLVQLDAATVACIVKVDRESLRVLD---QNGSIRTILPTQVTNKITPRRDAVATDRN 507
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ D VR V G + + G + HI+R LF+H++ E++G ++++ V V S
Sbjct: 508 GAEIRHGDTVREVYG--EQRNGVILHIHRSFLFLHNKAQAENSGITVVRTTNVVTV--SA 563
Query: 457 ANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLG 516
G G ++ N P SRGGP +G G D ++G TV VR G
Sbjct: 564 KGGRSTGPDLTKMN-----------PALMSRGGP-SGMMGPPKSFGRDRMIGKTVMVRKG 611
Query: 517 PYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSM--ISDNVVVST------------PYR 562
P+KG G V D RVEL S+ K+V++ + + + D V T P
Sbjct: 612 PFKGLVGIVKDAGDVQARVELHSKNKLVSIPKELLVVKDPVTGQTIEMGRGRGGPRVPSA 671
Query: 563 DTPRYGMGSETPM---HPSRTPLHPYMTPMRDAGATPIHDGM---RTPM----------- 605
P G TPM SRTP + R TP GM RTP
Sbjct: 672 APPSGWQGGRTPMAAADSSRTPAWGGASSAR----TPAWAGMGGSRTPAWKNDGSRTSNP 727
Query: 606 -------------RDRAWN-----PYTPMSPPRDNWEDGNPGS----WGT-----SPQY- 637
R AWN PY + +++ GS W +P +
Sbjct: 728 YDGSRTAYGGFGSRTPAWNAGARTPYGGSGSGQSDFDAFAAGSRTPAWNANSGSRTPAWS 787
Query: 638 ----QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST----YVNAPSP--YLPS 687
GS SR Y+APTPG +++ G Y+ A TP S+ T +AP+P +
Sbjct: 788 GATASNGSKDSRGYDAPTPGGAYSAPTPGAYASAPTPGVSAPTPGAWADSAPTPGAFNAP 847
Query: 688 TPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNE 730
TPGG P+ Y TP P DA +P +G D +
Sbjct: 848 TPGG----PSKKPYDAPTPAAWDSRP----YDAPTPAMGGDGD 882
>gi|190348398|gb|EDK40845.2| hypothetical protein PGUG_04943 [Meyerozyma guilliermondii ATCC
6260]
Length = 963
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 180/567 (31%), Positives = 284/567 (50%), Gaps = 47/567 (8%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVE 66
G L I +V D K YIYIEA + + A G+ N+Y + +LVP+RE D+L V+
Sbjct: 250 GRPLDILTVFQRDSFKGYIYIEAKRAEAIDRALAGMVNVYPKNRLLVPVREYPDLLKQVK 309
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-QALANKLEGREVA 125
S +++ +VRM G YKGDLA V ++ V KL+PR+D + +GR +
Sbjct: 310 SSDVEIVPGLYVRMTRGKYKGDLAIVDNLSENGLDVRCKLVPRLDYGKNDTFDRDGRRI- 368
Query: 126 KKKPFVPPPRFMNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K PP R + EAR + R P T Y G + DGFLYK ++ I+
Sbjct: 369 -KSKVRPPARLFSEQEARAYDSEFLSPGRGPRTYIYR----GDDYVDGFLYKDFKLQFIN 423
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+++ PT ELE+F G++G D+++++++ + F GD V V +G+ G V
Sbjct: 424 TKDVNPTLAELERFNV-GDDG-IDVSAVASM-KKEQTSAFQPGDKVEVRRGEQARTVGKV 480
Query: 245 EKVDEENVHIRPEMKGLPK----TLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
V I G P+ L V + +L K F PG+HV+VV+G A TG+V+K+E
Sbjct: 481 TASSLNEVTIMVTDSGDPRFVNQELTVVAADLRKVFAPGDHVRVVAGKHADETGLVIKLE 540
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
+++LSD TK D+RVFA+ +V++++ +T G Y+++DLV L+ ++ GVI++ + +
Sbjct: 541 GDSVVLLSDQTKADVRVFANYLVKATDASTSTETGGMYDIKDLVQLNASTVGVIVKADKD 600
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ---DRNKNTVAVKDVVRIVEGPCKGKQ 417
+++L + VK I KL Q D+N NTV V D VR + K ++
Sbjct: 601 LYELL---TSDGRLTTVKPSGIASKLRMTRREQIATDKNGNTVQVGDTVREL-ATDKKRE 656
Query: 418 GPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPR 477
G V HI++ LFI E+ GF + + V R+G + P
Sbjct: 657 GVVVHIFKNSLFIQSHDVSENLGFFVTNCMNVLAV-------TRDGP--------KGPDL 701
Query: 478 IPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVEL 537
+P + + P R RGG D L+ V V G +KG G+V D R+EL
Sbjct: 702 TKMNPNKVAGPSPAVTAR----RGGRDKLIYKDVIVTGGNHKGLMGKVTDTDDVFARIEL 757
Query: 538 ESQMKVVTVDRSMISDNVVV---STPY 561
++ K + V+++ +S V++ S PY
Sbjct: 758 HTKSKKIKVNKNNLS--VIIRGESIPY 782
>gi|406860218|gb|EKD13278.1| transcription initiation protein spt5 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1846
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 224/745 (30%), Positives = 359/745 (48%), Gaps = 85/745 (11%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K +IY+EA ++A + A GL N+Y + K+MLV I+EM D+L V +K L +VR+
Sbjct: 1056 MKGFIYVEAQRQADIMTALDGLMNVYPRTKMMLVEIKEMPDLLRV-TKTPSLEPGAYVRL 1114
Query: 81 KIG-NYKGDLAKVVDVDNVRQRVTVKLIPRID--LQALANKLEGREVAKKKPFV---PPP 134
K Y GDLA+V+DV + V V+ +PR+D L AN + +K+P PP
Sbjct: 1115 KRPPKYAGDLAQVIDVTDTGLEVRVRYVPRLDYGLHEDANAPQDFGAKRKRPTTGPRPPQ 1174
Query: 135 RFMNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
R + EA++ H + ++ R D T +Y G + +G+ K V ++++ +++ PT +
Sbjct: 1175 RLFSEVEAKKRHAKYLQGRSDTKTWNYL----GDEYINGYCEKEVKIQTLVTKDVNPTLE 1230
Query: 194 ELEKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEE 250
E+ +F + E+G ++ A ++L A+ ++ GD + V +G+ K + G V +
Sbjct: 1231 EVTRFASGAEDGTENLDLNALAASLKASTANASYLPGDVIEVYEGEQKGVVGKAVSVQGD 1290
Query: 251 NVHI---RPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQA-GATGMVLKVEQHVLII 306
V + +++G +T+ V K L K F G+HVKV+ G++ GMV+K+ Q + +
Sbjct: 1291 IVTMAVTEGDLRG--QTIEVPVKGLRKRFREGDHVKVIGGSRFRDEVGMVVKISQDRVTL 1348
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLK 366
L+D + ++ VF+ D+ E+S+ G + +EL DLV LD ++ +++V+ E+ VL
Sbjct: 1349 LTDQSNTEVTVFSKDLREASDSGGGGSLG-QFELWDLVQLDPSTVACVVKVDRESLVVLD 1407
Query: 367 GVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIY 424
+ +V +I KLEK+ + DRN + + D V+ E +G+ G + HI+
Sbjct: 1408 ---QNNQTRMVLPSQISNKLEKRKHAVATDRNGSEIRADDGVK--EHGGEGRSGKIIHIH 1462
Query: 425 RGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG- 483
R LF+ + E+AG +++S V A G R + + + P + ++PG
Sbjct: 1463 RAYLFLRNPAQSENAGVFVTRTTSVATVS---AKGGRLVTSSAPQDLTSMNPAMKRNPGG 1519
Query: 484 --RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
S P + GR+R +G TV +R GPYKG G V + + RVEL ++
Sbjct: 1520 GPNTSMPPPKSFGRDRA--------IGQTVTIRKGPYKGLLGIVKETTDTNARVELHTKS 1571
Query: 542 KVVTVDRSMISDNVVVS---------------TPYRDTPRYGMGSETPMHP------SRT 580
KV+ V + + ++ TP R + R GMGS TP H SRT
Sbjct: 1572 KVINVPKDALGFKDRITGQSIDPMSRGGRGGFTP-RGSSRGGMGSATPGHSWDAGHGSRT 1630
Query: 581 PL--HPYMTPMRDAGATP-IHDGMRTPMRDRAWNP-YTPMSPPRDNWEDGNPGSWGTSPQ 636
P+ TP A TP +G RTP + N TP P D NP G+
Sbjct: 1631 PMPSSTERTPAWGAARTPAAANGGRTPAWKASANDGRTPAWAPADGSRTVNPYD-GSRTA 1689
Query: 637 YQPGS-PPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMT 695
Y G+ P+ A TP G G N + + TP S S TP QP T
Sbjct: 1690 YGAGNRTPAWQSGARTPAYGLQQQDGFN-AGSKTPGYGGSGDSWGGS----KTPAYQPST 1744
Query: 696 PNSASYLPG--------TPGGQPMT 712
NS G TPG QPM+
Sbjct: 1745 SNSNDNTFGNSSWNNAPTPGNQPMS 1769
>gi|50548517|ref|XP_501728.1| YALI0C11561p [Yarrowia lipolytica]
gi|74604476|sp|Q6CC84.1|SPT5_YARLI RecName: Full=Transcription elongation factor SPT5; AltName:
Full=Chromatin elongation factor SPT5
gi|49647595|emb|CAG82038.1| YALI0C11561p [Yarrowia lipolytica CLIB122]
Length = 980
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 233/755 (30%), Positives = 346/755 (45%), Gaps = 99/755 (13%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVESKA 69
L+I SV D YIY+EA + V A KGL N+Y Q ++LVPI+E D+L A +S
Sbjct: 210 LEIMSVFQRDTFTGYIYMEARNQQAVTVALKGLVNVYPQNMILVPIKEYVDLLRATKSAE 269
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANK-LEGREVAKKK 128
+L +VR+K G Y GDLA V ++ V +KL+PR+D A ++G+ K+
Sbjct: 270 TELVPGAYVRLKRGKYGGDLAIVENLSENGLEVRLKLVPRLDYGRNAEAGIDGKR--KRV 327
Query: 129 PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNI 188
+PPPR + EA + R ++R P Y G + GFLYK + ++A+N+
Sbjct: 328 ARIPPPRLFSEQEASQYDPRNLQKRGPNAYVY----AGDEYIGGFLYKDFKITLVNAENV 383
Query: 189 QPTFDELEKFRTPGENGESDIASLS-TLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKV 247
P +EL +F + +G D+ASL+ +L + F GD V V +G+ ++G V
Sbjct: 384 APKLEELTRFNSEETDG-IDLASLAQSLRKSAAAVQFQGGDVVEVSEGEQTGVQGTVIST 442
Query: 248 DEENVHIRPEMKGL-PKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLII 306
+ V + L K + + S+ L K F G+HV+V+SG TG+++ +E + +
Sbjct: 443 HGDIVTVEATTAPLVGKRIDLPSRSLRKKFAIGDHVRVISGNFLDDTGLIVGLEDDSVTL 502
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLK 366
LSD K+++ VFA D+ + S++ G ++GDYEL D V LD G I++VE ++ +VL
Sbjct: 503 LSDLNKKEVTVFAKDLKKVSDI-GGSHQVGDYELHDFVQLDALHVGCIVKVERDSLKVLD 561
Query: 367 GVPDRPEVALVKLREIKCKLEKKSN--VQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIY 424
V V I KL + D N + + + D VR G +G+QG V HIY
Sbjct: 562 ---QEGTVRSVTPSSITMKLTRNMEGLATDSNGSEIKIGDTVRETVG--EGRQGAVLHIY 616
Query: 425 RGILFIHDRHHLEHAGFICAKSS--SCVVVGGSR--ANGDRNGDAYSRFNSLRTPPRIPQ 480
+ LF+ R G AK+ + +V G+R +N G ++ N P
Sbjct: 617 KNTLFLSSR----SLGVFVAKAFKVNTIVAKGARTQSNSQATGPDLTKMN----PAVYNA 668
Query: 481 SPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGP-YKGYRGRVVDVKGQSVRVELES 539
PG+ + PP + +GG D L G V + G +KG +G V + RVEL +
Sbjct: 669 RPGQMA---PPVMPK----QGGFDRLKGKHVAIGPGSQHKGCKGIVKETTDDIARVELHA 721
Query: 540 QMKVVTVDRSMI---SDNVVVSTPYRD----------------------------TPRYG 568
KVV V + + D Y + TP +G
Sbjct: 722 PCKVVNVLKHQLRIYDDYKKTYLSYMEFATPRGMRSGGGRPGGPPGPGGPGSGGQTPSWG 781
Query: 569 MGSETPMHPS--RTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDG 626
G +TP + +TP TP GA G RTP A N +P +
Sbjct: 782 GGGKTPSWGAGGKTPSWGSKTPSW-GGAKTSSWGSRTP----AANAGGAQTPAWGAMGNK 836
Query: 627 NPGSWGTSPQYQP--GSPPSRAYEAP-----TPGSGWASTPGGNYSDAGTPRDSSS---- 675
P SWG S P G + A+ A TP G A TP S AGT SSS
Sbjct: 837 TP-SWGASESRTPAWGGAKTPAWGAAGAGSKTPAFGVARTPSWKSSSAGTYGGSSSRNKG 895
Query: 676 -----TYVNAPSP-YLPSTPG---GQPMTPNSASY 701
+ +AP+P Y +TPG G P TP +A +
Sbjct: 896 WEDLGSGNSAPTPGYAAATPGEMMGAP-TPGAAHH 929
>gi|405117994|gb|AFR92769.1| transcription elongation factor SPT5 [Cryptococcus neoformans var.
grubii H99]
Length = 1151
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 186/672 (27%), Positives = 321/672 (47%), Gaps = 54/672 (8%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKA 69
+ + SV D + I+IEA + A V A G+ I+ S+ V LVPI EM +L ++ K
Sbjct: 236 IDVISVFCRDSIPGMIFIEARQSASVSAAVNGIVGIFMSKGVNLVPIEEMAPLLKMKKKD 295
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVT-VKLIPRIDLQALANKLEGREVAKKK 128
++L+ WVRMK G + GDLA+VVDVD + V +K IPRIDL + E + K
Sbjct: 296 VNLTPGMWVRMKRGKHAGDLAQVVDVDQITSGVVGIKFIPRIDLTPREKRKERIAIGKPG 355
Query: 129 PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNI 188
PP R D+ R+++ R R+ F+N + DGF K V + +++ +++
Sbjct: 356 GVRPPARLFAYDDVRKIYGRQSVRQGAQGSYLFDND---EYVDGFCIKDVKIPAVATEDV 412
Query: 189 QPTFDELEKFRTPGEN-GESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKV 247
PT +E+ +F ++ + D+++++ N GD + V +G+ L G VE V
Sbjct: 413 NPTLEEISRFTGDDDSTAKFDLSAIADANKNLSTSLLFPGDKIEVYEGEQTGLYGIVEAV 472
Query: 248 DEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLII 306
+ + I+ E + +T+ V ++ + K F+ G HVKV+ G A+GMV++V+ ++ +
Sbjct: 473 SPDVIAIKAEGGEVHGQTVEVPARSVRKRFDVGEHVKVLGGKHTDASGMVVEVKGDIVTL 532
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLK 366
+SD +++I+VF+ D+ ++++ T G Y++ D+V+LD+ + G++ +VE ++L
Sbjct: 533 MSDLGEQEIKVFSKDLRKAADTTNLTATKGLYDVHDMVMLDSTTAGLVTKVEGGLLRILD 592
Query: 367 GVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRG 426
V+ ++ I+ ++ + D N + V D ++ +G +QG V +I+R
Sbjct: 593 QNGAAKSVSPEQV-SIRRDNKRFAVATDSQGNDMKVGDNMKETDGEM--RQGEVINIFRS 649
Query: 427 IL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSP-GR 484
I F+++R + ++ G A+++S + V A D ++ N P Q P G
Sbjct: 650 IFVFLYNREYTDNFGVFVARANSLISVTPKSAVND-----LTKIN----PALNQQLPYGG 700
Query: 485 YSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVV 544
S P NR + L+ T V V G KG G + DV+G++ RVEL+ K +
Sbjct: 701 ASLMPAPTANLNR------NRLINTLVVVTKGTSKGLIGVIKDVQGENARVELKHNNKTL 754
Query: 545 TVDRSMISDN---------------VVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPM 589
+V+ + + + Y P G P + T +HP M
Sbjct: 755 SVNLASLKRKDQKTGATFPLETAGIASAAGGYGTRPNAGQYDINP-YGGATAMHPSM--- 810
Query: 590 RDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEA 649
G TP G RTP P P + N + NP + G G PS AY +
Sbjct: 811 --GGQTPALMGGRTPAVRFGQTP-NPYAAGVQNGKTPNPYATGVG-----GKTPSAAYAS 862
Query: 650 PTPGSGWASTPG 661
W ++ G
Sbjct: 863 GGKTPAWGASGG 874
>gi|169773511|ref|XP_001821224.1| transcription elongation factor SPT5 [Aspergillus oryzae RIB40]
gi|110826533|sp|Q2UGU3.1|SPT5_ASPOR RecName: Full=Transcription elongation factor spt5; AltName:
Full=Chromatin elongation factor spt5
gi|83769085|dbj|BAE59222.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391866063|gb|EIT75341.1| RNA polymerase II transcription elongation factor DSIF/SUPT5H/SPT5
[Aspergillus oryzae 3.042]
Length = 1026
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 237/823 (28%), Positives = 386/823 (46%), Gaps = 130/823 (15%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ GS ++ + A + + YIY+EA ++A V +A + + N+Y + K++L
Sbjct: 228 IQKRIEERPMGSRNPMKIISAFERGGAMSGYIYVEARRQADVMDALQDMSNVYPRTKMIL 287
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP+REM D+L V+ K+ +L WVR+K G Y+ DLA++ +V+ VTV+L+PR+D
Sbjct: 288 VPVREMPDLLRVQ-KSEELLPGGWVRIKRGKYQNDLAQIEEVETNGLAVTVRLVPRLDYG 346
Query: 114 ALANKLEGR---EVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENI 164
N+ G + +K+P + PP R + EA++ H + + G + +
Sbjct: 347 M--NEDIGAPFMDPKRKRPGMNPAVARPPQRLFSEAEAKKKHGKYLSATSGLGGKSWSYL 404
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKK 221
G + DGFL K + ++ + +N+ P +E+ F E+G + D+ASL+ TL + +
Sbjct: 405 G-ETYVDGFLIKDMKVQHLITKNVSPRLEEVTMFARGSEDGTANLDLASLAETLKNSTAE 463
Query: 222 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + L G + V ++ L + + K L K F G+
Sbjct: 464 DSYLPGDPVEVFRGEQQGLIGRTTSTRGDIVTLQVTEGDLAGQHIDAPVKSLRKRFREGD 523
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDY 338
HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+ S+E TG+ K+G +
Sbjct: 524 HVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLRLSAE--TGVDGKLGMF 581
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRN 396
++ DLV LD + I++V+ E+ +VL + + ++ K+ + + DRN
Sbjct: 582 DVHDLVQLDAATVACIVKVDRESLRVLD---QNGSIRTILPTQVTNKITPRRDAVATDRN 638
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ D VR V G + + G + HI+R LF+H++ E++G ++++ V V S
Sbjct: 639 GAEIRHGDTVREVYG--EQRNGVILHIHRSFLFLHNKAQAENSGITVVRTTNVVTV--SA 694
Query: 457 ANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLG 516
G G ++ N P SRGGP +G G D ++G TV VR G
Sbjct: 695 KGGRSTGPDLTKMN-----------PALMSRGGP-SGMMGPPKSFGRDRMIGKTVMVRKG 742
Query: 517 PYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSM--ISDNVVVST------------PYR 562
P+KG G V D RVEL S+ K+V++ + + + D V T P
Sbjct: 743 PFKGLVGIVKDAGDVQARVELHSKNKLVSIPKELLVVKDPVTGQTIEMGRGRGGPRVPSA 802
Query: 563 DTPRYGMGSETPM---HPSRTPLHPYMTPMRDAGATPIHDGM---RTPM----------- 605
P G TPM SRTP + R TP GM RTP
Sbjct: 803 APPSGWQGGRTPMAAADSSRTPAWGGASSAR----TPAWAGMGGSRTPAWKNDGSRTSNP 858
Query: 606 -------------RDRAWN-----PYTPMSPPRDNWEDGNPGS----WGT-----SPQY- 637
R AWN PY + +++ GS W +P +
Sbjct: 859 YDGSRTAYGGFGSRTPAWNAGARTPYGGSGSGQSDFDAFAAGSRTPAWNANSGSRTPAWS 918
Query: 638 ----QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST----YVNAPSP--YLPS 687
GS SR Y+APTPG +++ G Y+ A TP S+ T +AP+P +
Sbjct: 919 GATASNGSKDSRGYDAPTPGGAYSAPTPGAYASAPTPGVSAPTPGAWADSAPTPGAFNAP 978
Query: 688 TPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNE 730
TPGG P+ Y TP P DA +P +G D +
Sbjct: 979 TPGG----PSKKPYDAPTPAAWDSRP----YDAPTPAMGGDGD 1013
>gi|146414035|ref|XP_001482988.1| hypothetical protein PGUG_04943 [Meyerozyma guilliermondii ATCC
6260]
Length = 963
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 181/567 (31%), Positives = 283/567 (49%), Gaps = 47/567 (8%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVE 66
G L I +V D K YIYIEA + + A G+ N+Y + +LVP+RE D+L V+
Sbjct: 250 GRPLDILTVFQRDSFKGYIYIEAKRAEAIDRALAGMVNVYPKNRLLVPVREYPDLLKQVK 309
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-QALANKLEGREVA 125
S +++ +VRM G YKGDLA V ++ V KL+PR+D + +GR +
Sbjct: 310 SSDVEIVPGLYVRMTRGKYKGDLAIVDNLSENGLDVRCKLVPRLDYGKNDTFDRDGRRI- 368
Query: 126 KKKPFVPPPRFMNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K PP R + EAR + R P T Y G + DGFLYK ++ I+
Sbjct: 369 -KLKVRPPARLFSEQEARAYDSEFLSPGRGPRTYIYR----GDDYVDGFLYKDFKLQFIN 423
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+++ PT ELE+F G++G D+++++ L + F GD V V +G+ G V
Sbjct: 424 TKDVNPTLAELERFNV-GDDG-IDVSAVA-LMKKEQTSAFQPGDKVEVRRGEQARTVGKV 480
Query: 245 EKVDEENVHIRPEMKGLPK----TLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
+ V I G P+ L V + +L K F PG+HV+VV+G A TG+V+K+E
Sbjct: 481 TALSLNEVTIMVTDSGDPRFVNQELTVVAADLRKVFAPGDHVRVVAGKHADETGLVIKLE 540
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
+++LSD TK D+RVFA+ +V++++ T G Y+++DLV L+ ++ GVI++ + +
Sbjct: 541 GDSVVLLSDQTKADVRVFANYLVKATDALTSTETGGMYDIKDLVQLNASTVGVIVKADKD 600
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ---DRNKNTVAVKDVVRIVEGPCKGKQ 417
+++L + VK I KL Q D+N NTV V D VR + K ++
Sbjct: 601 LYELL---TSDGRLTTVKPSGIASKLRMTRREQIATDKNGNTVQVGDTVREL-ATDKKRE 656
Query: 418 GPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPR 477
G V HI++ LFI E+ GF + + V R+G + P
Sbjct: 657 GVVVHIFKNSLFIQLHDVSENLGFFVTNCMNVLAV-------TRDGP--------KGPDL 701
Query: 478 IPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVEL 537
+P + + P R RGG D L+ V V G +KG G+V D R+EL
Sbjct: 702 TKMNPNKVAGPSPAVTAR----RGGRDKLIYKDVIVTGGNHKGLMGKVTDTDDVFARIEL 757
Query: 538 ESQMKVVTVDRSMISDNVVV---STPY 561
++ K + V+++ +S V++ S PY
Sbjct: 758 HTKSKKIKVNKNNLS--VIIRGESIPY 782
>gi|296423718|ref|XP_002841400.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637638|emb|CAZ85591.1| unnamed protein product [Tuber melanosporum]
Length = 1054
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 177/576 (30%), Positives = 288/576 (50%), Gaps = 49/576 (8%)
Query: 1 MQKCIDKGSELQIRSVIAL-DHLKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIRE 58
++ + + LQI S + + + YIY+EA K+A V A +G+ +Y K++LVPI+E
Sbjct: 207 QEELANTKAPLQITSALERGNTMPGYIYVEAKKQADVMHALQGVSFVYPMTKMILVPIKE 266
Query: 59 MTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL--QALA 116
M D+L V KA +++ TWVR K G Y+GDLA+V +V V ++++PR+D A A
Sbjct: 267 MPDLLFVMKKA-EITPGTWVRFKRGKYQGDLAQVENVLASGLEVKIRMVPRLDYGNGADA 325
Query: 117 NKLEGREVAKKKPF--------VPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGML 168
+ G + K+ PF PP R + EAR+ H + + F +G
Sbjct: 326 DDPSGNK-RKRNPFGKNGSLAGRPPQRLFSEVEARKNHAKYLSQAAQGLKKIFTYLGDE- 383
Query: 169 FKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKK--GHFMK 226
++DG+ K V + I +N+ PT +E+ KF + G++G + L L + KK +
Sbjct: 384 YEDGYYIKDVKLNLIQTENVNPTLEEVSKFASGGDDGTESL-DLHALAQSLKKTVSTYQV 442
Query: 227 GDAVIVIKGDLKNLKGWVEKVDEENVH---IRPEMKGLPKTLAVNSKELCKYFEPGNHVK 283
GD V V G+ L G V + V + +KG K V K L K F PG+HVK
Sbjct: 443 GDTVEVYDGEQNGLVGKAVSVHGDIVTLDVLEGPLKG--KRTEVPFKGLRKRFNPGDHVK 500
Query: 284 VVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRD 342
V G++ GMVL++ + + ++SD +I VF+ D+ E+SE + G+ G Y+L D
Sbjct: 501 VTGGSRFRDEVGMVLRINEDRVTLISDVGMTEITVFSKDLREASE-SGGMETGGKYDLHD 559
Query: 343 LVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSN--VQDRNKNTV 400
LV LD + + +V+ E+ +++ + + + + +I KL + DRN + +
Sbjct: 560 LVQLDATTVACVTKVDRESVRIIDQLGN---IRTIMPSQIASKLSNRRPGVATDRNGSEI 616
Query: 401 AVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAG-FICAKSSSCVVV--GGSRA 457
V D V+ G + + G + HI+R F+H+R +AG F+C ++ + GG
Sbjct: 617 RVGDTVKETGG--ETRSGVILHIFRSFAFLHNREETSNAGVFVCRTNNVATIAAKGGRIT 674
Query: 458 NGDRNGDAYSRFNSLRTPPRIPQSPGRY--SRGGPPAGGRNRGGRGGHDALVGTTVKVRL 515
N G ++ N Q GR + PP GG D +G TV +R
Sbjct: 675 NTQSTGPDLTKMNPAM------QRNGRSLDASAMPPP------RTGGRDRTIGQTVTIRQ 722
Query: 516 GPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI 551
GPYKG G V D + RVEL ++ K+VT++++ +
Sbjct: 723 GPYKGLVGIVKDATDATARVELHTKNKIVTIEKAKL 758
>gi|407928419|gb|EKG21276.1| hypothetical protein MPH_01419 [Macrophomina phaseolina MS6]
Length = 987
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 279/546 (51%), Gaps = 31/546 (5%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+ YIY+EA K+A AC+ + Y + K++LVP++EM D+L V+ K+ +L+ +VR+
Sbjct: 179 MSGYIYVEARKQASALAACENISFCYPRGKMILVPLKEMPDLLRVK-KSKELAEGMYVRV 237
Query: 81 K-IGNYKGDLAKVVDVDNVRQRVTVKLIPRID--LQALANKLEGREVAKKKPFV----PP 133
K G Y GDLA+V +V++ VTV+LIPR+D L N L + +K+P PP
Sbjct: 238 KGNGLYAGDLAQVTEVESNGNEVTVRLIPRLDYGLNDDPNALP--DAKRKRPGTLTSRPP 295
Query: 134 PRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
R N EA++ H++ + + + G + DGFL KTV + + +N+ P +
Sbjct: 296 QRLFNDVEAKKKHMKFLTQENSLAGQRIWIYKKDRYVDGFLEKTVKLNQLQTENVNPRLE 355
Query: 194 ELEKFRTPGENGESDIASLSTLFANRKK---GHFMKGDAVIVIKGDLKNLKGWVEKVDEE 250
E+ KF GE+G ++ + ++ ++ GD V + +G+ + G V +
Sbjct: 356 EVTKFAAGGEDGTENLDLAALAATLKQASTGADYLPGDMVEIYQGEQTGVSGRAVAVHND 415
Query: 251 NVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILS 308
V +R + L +T+ K L K F+ G+HVKVV G++ GMV+KV + +L+
Sbjct: 416 IVTLRVQEGDLKGQTVEAPVKSLRKLFKEGDHVKVVGGSKYHDEVGMVIKVRNDRVTLLT 475
Query: 309 DTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGV 368
D+T +++ VF+ D+ +S+ + G+ Y+L +LV LD ++ II+V+ E+ +VL
Sbjct: 476 DSTNQEVTVFSRDLRVASD-SGGMQGASKYDLFELVQLDASTVACIIKVDRESLRVLD-- 532
Query: 369 PDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRG 426
V + I +++++ N DR+ + + +D V+ E + +QG V HI+R
Sbjct: 533 -QNGTVRTLLPSNISNRVDRRKNAVATDRDGSEIRTEDTVK--EHGGEQRQGRVLHIHRS 589
Query: 427 ILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYS 486
LF+ ++ E+AG ++++ V G S+ N L + Q P
Sbjct: 590 FLFVQNKSRAENAGVFVVRAANVTTVAAKSGKVASAGPDLSKMNPLLQRQDLRQGPNGPG 649
Query: 487 RGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTV 546
PP G D L+G TV VR G YKG G V D RVEL ++ K +T+
Sbjct: 650 SMAPPK-------TMGRDRLIGKTVIVRKGAYKGLLGIVKDTTDLEARVELHTKNKTITI 702
Query: 547 DRSMIS 552
+ +++
Sbjct: 703 PKEILT 708
>gi|295668190|ref|XP_002794644.1| transcription elongation factor spt5 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226286060|gb|EEH41626.1| transcription elongation factor spt5 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1105
Score = 225 bits (574), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 215/736 (29%), Positives = 361/736 (49%), Gaps = 73/736 (9%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+ YIY+EA ++A V +A + N+Y++ K++L+ ++EM D+L V +K+ +L WVR+
Sbjct: 288 MSGYIYVEARRQADVIDALDDMSNVYTKSKMILISVKEMPDLLRV-TKSEELVPGGWVRI 346
Query: 81 KIGNYKGDLAKVVDVDNVRQRVTVKLIPRID--LQALANKLEGREVAKKKPFV------P 132
K G Y+GDLA++ DV+ VTV+L+PR+D L + G + +K+P V P
Sbjct: 347 KRGKYQGDLAQLEDVETNGLDVTVRLVPRLDYGLNEDMSAPNG-DAKRKRPGVNNAIARP 405
Query: 133 PPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTF 192
P R + EA++ H + + G + +G + DGFL K + ++ + +N+ P
Sbjct: 406 PQRPFSETEAKKKHAKYLSATSGLGGKTWNYLGDN-YVDGFLIKDMKVQHLITKNVNPQL 464
Query: 193 DELEKFRTPGENGESDIASLSTLFANR---KKGHFMKGDAVIVIKGDLKNLKGWVEKVDE 249
DE+ KF ++G +++ + + + + ++ GD V V +G+ + + G
Sbjct: 465 DEVTKFARGADDGTANLDLAALAASLKDTTSEDSYLPGDTVEVFQGEQQGVVGRTVSTRG 524
Query: 250 ENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLI 305
+ V I+ E++G + + V K L K F+ G+HVKV+ G++ GMV++++ +
Sbjct: 525 DIVSIKVTEGELEG--QQIDVPIKGLRKRFKEGDHVKVIGGSRFRDELGMVVRIKDDRVT 582
Query: 306 ILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
+LSD ++I VF+ D+ E+++ G+ K+G Y++ DLV LD + G II+++ E+ +V
Sbjct: 583 LLSDMNMQEITVFSKDIREAADA--GVDGKLGMYDVHDLVQLDQATVGCIIKLDRESMRV 640
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEH 422
L + V ++ K+ ++ N DRN + + D VR + G + + G + H
Sbjct: 641 LD---QNGSIRNVLPSQVMNKINQRRNAVSTDRNGSEIRCGDTVREITG--EQRTGVILH 695
Query: 423 IYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRAN-GDRNGDAYSRFNSLRTPPRIPQS 481
I+R LF+++R +++AG I ++S+ + S G R+ +SR N P + Q
Sbjct: 696 IHRSFLFLNNRDAIDNAGIIVTRASNVNTIATSGGRLGSRSAPDFSRMN-----PAL-QK 749
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G G PP D +G TV +R GP+KG G V D RVEL S+
Sbjct: 750 NGMNGNGMPPPKSFV------SDRAIGKTVTIRRGPFKGLLGIVKDTTETQARVELHSKN 803
Query: 542 KVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGA-TPI--H 598
KVVTVD+ M+S ++ D R+G R+ + P AG+ TP+ +
Sbjct: 804 KVVTVDKDMLSMKDPITGASIDISRFGGRGGGGAGRGRSAYNASAAPPDWAGSRTPMAAN 863
Query: 599 DGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWAS 658
D RTP AW + +P W S T GS S Y+ G
Sbjct: 864 DSSRTP----AWRSSSSRTPA---WNAAAASSSRTPAWKADGSRTSNPYDGNRTAYG--- 913
Query: 659 TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNS-------ASYLPGTPGGQ-P 710
GG +S + TP ++ T +PY S+ G ++ NS S P PGG
Sbjct: 914 --GGAFSGSRTPAWTAGTK----TPYDSSS--GFGVSSNSGFDAFAAGSRTPAYPGGTGS 965
Query: 711 MTPGTGGLDAMSPVIG 726
TP G A P +G
Sbjct: 966 RTPAWGPGSAAPPPVG 981
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 71/184 (38%), Gaps = 54/184 (29%)
Query: 559 TPYRDTPRYGMGSETPMHP----SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYT 614
TPY + +G+ S + SRTP +P T G RTP AW P +
Sbjct: 931 TPYDSSSGFGVSSNSGFDAFAAGSRTPAYPGGT------------GSRTP----AWGPGS 974
Query: 615 PMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPG-SGWASTPGGNYSDAGTPR-- 671
PP G G S P Y APTPG G A TPG A TPR
Sbjct: 975 AAPPP--------VGQSGGSKSSYDAPTPGGDYTAPTPGPYGAALTPGAT---AATPRAW 1023
Query: 672 -DSSST--YVNAPSP-------------YLPSTPGGQPMT---PNSASYLPGTPGGQPMT 712
DS+ T ++AP+P Y TP G M+ P A P T G P T
Sbjct: 1024 ADSAPTPGAMHAPTPDVLGYSGKRSGEPYDAPTPAGMSMSGGRPYDAP-TPATGMGIPAT 1082
Query: 713 PGTG 716
PG G
Sbjct: 1083 PGAG 1086
>gi|296818841|ref|XP_002849757.1| transcription elongation factor spt5 [Arthroderma otae CBS 113480]
gi|238840210|gb|EEQ29872.1| transcription elongation factor spt5 [Arthroderma otae CBS 113480]
Length = 1068
Score = 225 bits (573), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 200/670 (29%), Positives = 326/670 (48%), Gaps = 73/670 (10%)
Query: 8 GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVL 63
GS I+ + A + + YIY+EA K+A + +A G+ NIY K+ L+ ++EM D+L
Sbjct: 252 GSRNPIKIISAFERGGTMAGYIYVEARKQADIIDALDGMSNIYVRSKLTLISVKEMPDLL 311
Query: 64 AVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI------DLQALAN 117
V+ K+ +L+ WVR+K G Y+GDLA++ +V+ VTV+L+PR+ D A A
Sbjct: 312 RVK-KSEELTPGGWVRIKRGRYQGDLAQLEEVETNGLNVTVRLVPRLEYGLNEDSNAPAV 370
Query: 118 KLEGREVAKKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYK 176
+ + V PP R + EA++ H + + G + +G + DGFL K
Sbjct: 371 DPKRKRVGASSAIARPPQRLFSEAEAKKRHSKYLSATSSLGGKSWSYLGDT-YVDGFLIK 429
Query: 177 TVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANR-KKGHFMKGDAVIVI 233
+ ++ + +N+ P DE+ KF ++G S D+ASL+ N ++ ++ GD V V
Sbjct: 430 NMKVQHLITKNVNPQLDEVTKFARGADDGTSNLDLASLAATIKNTTEEDAYLVGDTVEVF 489
Query: 234 KGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ- 289
G+ + + G + V I+ E++G + + V +K L K F G+HVKV+ G++
Sbjct: 490 TGEQRGVVGQTVSTRGDIVTIKVLEGELRG--QHIDVPTKGLRKRFSEGDHVKVIGGSKY 547
Query: 290 AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELRDLVLLDN 348
GMV++++ + IL+D T ++I VF+ D+ E+ ++ G+ K+G Y++ DLV +D
Sbjct: 548 RDELGMVVRIKDDRVTILTDMTMQEITVFSKDLREADDI--GVDGKLGQYDVHDLVQIDQ 605
Query: 349 NSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVV 406
+ G +++++ E+ +V+ +V +I K+E++ + DRN + + D V
Sbjct: 606 TTVGCVVKLDRESMRVID---QNGSTQIVLPSQILGKIEQRRHAVTTDRNGSEIKCGDTV 662
Query: 407 RIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAY 466
+ V G + + G + HI+R LF + ++AG + ++ + V S + R+
Sbjct: 663 KEVTG--EQRSGTILHIHRAFLFCTSKVVGDNAGIMVTRAINVTTVATSGSKLSRSAPDL 720
Query: 467 SRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVV 526
S+ N P + Q G G PP G D LVG TV +R GPYKG G V
Sbjct: 721 SKMN-----PAL-QKNGMNGSGMPPPR------TFGRDRLVGKTVHIRKGPYKGLLGIVK 768
Query: 527 DVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTP----RYGMGS----ETPMHPS 578
D RVEL S KVV V++ +N+ V P P R+G G P +
Sbjct: 769 DTTDVIARVELHSVSKVVPVEK----ENLAVKDPITGQPVDINRFGGGRGGAPRVPQSMA 824
Query: 579 RTPLHPYMTPMRDAGATPIH--DGMRTPM------RDRAWNPYTPMSPPRDNWE------ 624
P + G TPI D RTP R AWN T P E
Sbjct: 825 TGRAGPQDAAWQ-GGRTPIAMGDSSRTPAWRASSSRTPAWNAGTGSRTPAWKAEGARTAN 883
Query: 625 --DGNPGSWG 632
DGN S+G
Sbjct: 884 PYDGNRTSYG 893
>gi|320035888|gb|EFW17828.1| transcription elongation factor spt5 [Coccidioides posadasii str.
Silveira]
Length = 1051
Score = 225 bits (573), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 205/671 (30%), Positives = 327/671 (48%), Gaps = 73/671 (10%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+ Y+YIEA K+A V +A L N++ K+ L+ ++EM D+L V+ K+ +L WVR+
Sbjct: 275 MSGYVYIEARKQADVMDALDNLSNVFIRSKLTLISVKEMPDLLRVQ-KSEELQPGGWVRI 333
Query: 81 KIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN-KLEGREVAKKKP------FVPP 133
K G Y+GDLA++ +V+ VTV+L+PR+D + ++ + +K+P PP
Sbjct: 334 KRGKYQGDLAQIEEVETNGLEVTVRLVPRLDYGLNDDVQIPNGDTKRKRPGGKSAVARPP 393
Query: 134 PRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
R + EA++ H R + G + +G + DGFL K + ++ + +N+ P D
Sbjct: 394 QRLFSEAEAKKRHSRYLSAAAGLGGKSWTYLGDT-YIDGFLIKDMKIQHLITKNVNPQLD 452
Query: 194 ELEKFRTPGENG--ESDIASLS-TLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEE 250
E+ KF ++G D+ASL+ +L + ++ GD V V G+ K + G V +
Sbjct: 453 EVTKFARGADDGTVNLDLASLAASLKDTTGEDSYVPGDTVEVFSGEQKGVVGRVIAGRAD 512
Query: 251 NVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLII 306
V I+ E++G + L V K L K F G+HVKV+ G++ GMV++++ + +
Sbjct: 513 IVSIKVVEGELEG--QRLEVPVKGLRKRFREGDHVKVIGGSKYRDELGMVVRIKDDRVTL 570
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELRDLVLLDNNSFGVIIRVESEAFQVL 365
L+D + ++I VF+ D+ E+ +V G+ K+G Y++ DLV LD + G II+++ E+ +V+
Sbjct: 571 LTDMSMQEITVFSKDLREAEDV--GVDGKLGQYDVHDLVQLDQTTVGCIIKLDRESMKVI 628
Query: 366 KGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
V + + K+E + N DRN + D VR V G + + G + H+
Sbjct: 629 D---QHGSVRTLLPSRVLGKIEHRRNAVTTDRNGAEIKYGDTVREVAG--EQRLGVILHV 683
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R LF+ + ++AG I +++S+ V V S + G S+ N P + Q G
Sbjct: 684 HRAFLFLQSKVVGDNAGIIVSRASNVVTVATSGGSLAPRGPDLSKMN-----PAL-QRNG 737
Query: 484 RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKV 543
G PP G D VG TV +R GPYKG G V D RVEL S KV
Sbjct: 738 MNGSGMPPPRTV------GRDRTVGKTVTIRKGPYKGLLGIVKDTTDDIARVELHSVSKV 791
Query: 544 VTVDRSMISDNVVVSTPYRDTP---------RYGMGSETPMHPSRTPLHPYMTPMRDAGA 594
V V++ +N+ + P P G TP S P P G
Sbjct: 792 VPVEK----ENLTIKDPITGQPIDLRQFGRGAGRGGPRTPQGTSAAP--PRAQSAWQGGR 845
Query: 595 TPI--HDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQP-GSPPSRAYEAPT 651
TPI D RTP AW + +P W G+ +P ++ GS AY+A
Sbjct: 846 TPIAAKDSSRTP----AWRASSSRTPA---WNAAASGA--RTPAWKTDGSRTVNAYDA-- 894
Query: 652 PGSGWASTPGG 662
G+ ST GG
Sbjct: 895 ---GYKSTLGG 902
Score = 43.5 bits (101), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 23/156 (14%)
Query: 564 TPRYGMGSETPMHPSRTPLHPYMTPMRDA---GA-TPIHDGMRTPMRDRAWNPYTPMS-- 617
TP + GS+TP H S + DA GA TP H G R AW + S
Sbjct: 904 TPAWAAGSKTPHHASSGFGGSSSSSGFDAFLAGARTPAHTGTLGGSRTPAWGHSSGSSGK 963
Query: 618 -----PPRDNWEDGNPGSWGTSPQYQPGSPPSRAYE--APTPGSGWASTPGGNYSDAGTP 670
P ++ +P ++GT+P P R + APTPG+ A TPG +G P
Sbjct: 964 AFDAPTPGGDYAAPSPAAFGTAPTPGATGPTPRPWNDAAPTPGATSAPTPGA----SGYP 1019
Query: 671 RDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP 706
ST +A LP+TPG + Y GTP
Sbjct: 1020 ----STSTSAGGMGLPATPGA--LDDGGPRYEEGTP 1049
>gi|224077938|ref|XP_002305464.1| predicted protein [Populus trichocarpa]
gi|222848428|gb|EEE85975.1| predicted protein [Populus trichocarpa]
Length = 147
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/146 (76%), Positives = 128/146 (87%), Gaps = 2/146 (1%)
Query: 694 MTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILV--RRSGEESVVGV 751
MTP SASYLPGTPGGQ MTPGT GLD MSPVIG D EGPWF+PDILV R+ +E VG+
Sbjct: 1 MTPGSASYLPGTPGGQLMTPGTNGLDMMSPVIGGDGEGPWFIPDILVNVHRTTDEPTVGI 60
Query: 752 IREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDG 811
IREVL DGSC++ LG++GNG+T+TALP+EIEIV PRK+DKIKI+GG HRG TGKLIGVDG
Sbjct: 61 IREVLQDGSCKIALGANGNGETLTALPSEIEIVVPRKSDKIKILGGAHRGVTGKLIGVDG 120
Query: 812 TDGIVKVDVSLDVKILDMAILAKLAQ 837
TDGIVK++ +LDVKILDMAILAKLAQ
Sbjct: 121 TDGIVKLEDTLDVKILDMAILAKLAQ 146
>gi|392590273|gb|EIW79602.1| transcription elongation factor Spt5 [Coniophora puteana RWD-64-598
SS2]
Length = 1196
Score = 224 bits (571), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 169/598 (28%), Positives = 294/598 (49%), Gaps = 75/598 (12%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K +D + LQI S D L +Y+EA V ACKGL +Y S+ ++LVPI
Sbjct: 216 MRKALDLEYTAAPLQILSAFQRDSLPGMVYVEARSAQQVNVACKGLVGVYPSRGIVLVPI 275
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL- 115
EM +L ++ + ++ +WVR++ G Y+GDLA+V+D+ + V +K +PRIDL
Sbjct: 276 EEMASLLQIKKQEQTVTPGSWVRVRRGKYQGDLAQVMDITENGEDVGLKFVPRIDLNPKD 335
Query: 116 ANKLEGREVAKKKPFV-------------------PPPRFMNVDEARELHIR--VERRRD 154
N ++GR+ +KK F PP RF N +E +++ R V +R
Sbjct: 336 ENSIDGRK--RKKAFESGGAVTGGGGGAGGSFSMRPPQRFFNFEEVVKVYGRKNVSKRNQ 393
Query: 155 PMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKF-------------RTP 201
F+N ++DGF+ K + ++ N+ P+ DE+ KF
Sbjct: 394 VYV---FQND---TYRDGFIEKDFKLSALQLDNVNPSLDEITKFTRGAGEGGAAGGLDGA 447
Query: 202 GENGESDIASLSTLFANRKKGH---FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP-- 256
G + + LS + +K GD V V +G+ + G V+ + ++ V I
Sbjct: 448 GGSAGENTVDLSIIAEASRKAAIAVLQPGDHVEVFEGEQSGVHGVVDSISQDVVTIVAVG 507
Query: 257 -EMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDI 315
++ G + + V ++ + K F+PG+HVKV++G A TG+V+ V +V+ LSD + +++
Sbjct: 508 VDVDG--QKVDVPARSVRKRFKPGDHVKVMAGKNADETGLVVAVSDNVVTFLSDMSMQEV 565
Query: 316 RVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVA 375
VF+ D+ E++EV +G +G+YEL DLV LD + GVI + E ++F+VL +V
Sbjct: 566 SVFSKDLREAAEVGSGTNIVGNYELHDLVQLDMQTVGVIFKTERDSFRVLD---QNGQVR 622
Query: 376 LVKLREIKCKLEK-KSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDR 433
LV+ +I + + ++ D + + V D ++ V+G + ++G V H+++ F+H+R
Sbjct: 623 LVQPHQISMRRDSTRAIATDSEGHEIRVNDNMKEVDG--EARKGRVLHVHQSFYAFLHNR 680
Query: 434 HHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAG 493
E+ G ++ + + +++ + G S+ N L GP
Sbjct: 681 EIAENGGVFVTRTRALASL-APKSSIVKTGLDASKQNPLLAGGGGGMVGSGTMGRGP--- 736
Query: 494 GRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI 551
D +G + V G YKGY G + D G RVEL + KV+++D+ +
Sbjct: 737 ---------RDRDIGAPITVVQGSYKGYHGLIKDTNGTIARVELNTGNKVISIDKGKL 785
>gi|254572547|ref|XP_002493383.1| Protein that forms a complex with Spt4p [Komagataella pastoris
GS115]
gi|238033181|emb|CAY71204.1| Protein that forms a complex with Spt4p [Komagataella pastoris
GS115]
gi|328352603|emb|CCA39001.1| Transcription elongation factor spt5 [Komagataella pastoris CBS
7435]
Length = 908
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 210/699 (30%), Positives = 327/699 (46%), Gaps = 85/699 (12%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKV-MLVPIREMTDVLA-VESK 68
L+I S D K ++YIEA K + +A KG N++S LV I E D+L V+S
Sbjct: 257 LEIYSAFQRDSFKGHVYIEARKAEAINDALKGNVNVFSNNSKFLVGIVEYKDLLRPVKSS 316
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID----LQALA-----NKL 119
+ L+R ++VR+K G +KGDLA+V +V +KL+PR+D L L+ +
Sbjct: 317 DVKLTRGSYVRVKNGKFKGDLAQVDEVLENGLEARLKLVPRLDYGKDLSHLSTSSSVDST 376
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
+ R F P R + EAR + R RD F GG + +GFLYKT
Sbjct: 377 KNRRKFYTSKFRPAQRLFSEAEARVHEPTIRRDRDG-----FVTYGGEEYYEGFLYKTFR 431
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKG--HFMKGDAVIVIKGDL 237
++++ +I PT +EL F++ E+ D+++++ K F GD V +I G+L
Sbjct: 432 LQNLIVNSINPTLNELSLFQSNEESTTIDLSTIADSLKETAKNLVSFQPGDNVEIINGEL 491
Query: 238 KNLKGWVEKVDEE---NVHIRPEMKGL-PKTLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
+L G V V++ +V + + + +T+ + + +L K F G+HV+V+ G T
Sbjct: 492 NHLTGTVSSVNQSTIVSVRLHSDDDTINSETVEIPTSDLRKIFNVGDHVRVIHGKHTDDT 551
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGV 353
G++++V + +S+ TK + VF++ +++S++ T I + G +EL DLV ++++ G+
Sbjct: 552 GLIVEVNGDKVEFISNQTKRTVIVFSNYLIKSTDSTVSINESGRFELHDLVQVNSDLVGI 611
Query: 354 IIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ---DRNKNTVAVKDVVRIVE 410
+IR + ++F VL D ++L + I KL N Q D N V V D VR
Sbjct: 612 VIRAQKDSFDVL--CSDGKLLSLPPV-SIYSKLNLNPNQQIAIDSNGVEVKVGDTVREFT 668
Query: 411 GPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRAN---GDRNGDAYS 467
G + +QG + H+YR LF+ R +E+ G + SS+ V S++N G +G S
Sbjct: 669 G--ERRQGTILHVYRNFLFLRSREIVENQG-VFVTSSNRVKTITSKSNGTGGQISGPDLS 725
Query: 468 RFNSLRT--PPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRV 525
R N R PP IP + R + G D + TVK+R G YKG G V
Sbjct: 726 RMNPSRVIPPPSIPVANQRMT---------------GRDPTLNKTVKIRQGGYKGKIGIV 770
Query: 526 VDVKGQSVRVELESQMKVVTVDRSMISDNVVVST----PYRD-TPRYGMGSETPMHP--- 577
+ G RVEL + K + + S + ++ ST PY D G P H
Sbjct: 771 KEANGDRFRVELHNPNKTIPIPCSFL---LIESTHGWVPYEDFVASDRRGGNIPRHEISG 827
Query: 578 -SRTPLHPYMTPMRDAGATPIH-DGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSP 635
+ P H G TP G +TP AW G+ GS G +P
Sbjct: 828 HVQQPQHGRAPAWGSGGKTPAWGSGGKTP----AW---------------GSGGSGGKTP 868
Query: 636 QY-QPGSPPSRAYEAPTPGSGWAS-TPGGNYSDAGTPRD 672
+ G P+ A TP G S TP + D RD
Sbjct: 869 AWGSGGKTPTWGSGAKTPAWGSGSKTPAWSGLDEEDRRD 907
>gi|310796509|gb|EFQ31970.1| hypothetical protein GLRG_07114 [Glomerella graminicola M1.001]
Length = 1052
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 223/755 (29%), Positives = 356/755 (47%), Gaps = 89/755 (11%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA++ + A G+ N+Y + K++LV I++M D+L V +K L WVR+
Sbjct: 258 MKGYIYVEANRSTDIMVALDGMFNVYPRSKMILVDIKDMPDLLRV-TKTPTLEPGAWVRL 316
Query: 81 -KIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL----QALANKLEGREVAKKKPF----- 130
K + GDLA+V+DV V+ IPR+D ALA+ L + +K+P
Sbjct: 317 RKPAKHAGDLAQVIDVTENGLEARVRFIPRLDYGMRDDALASALTA-DGKRKRPIGMAGP 375
Query: 131 VPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQP 190
PP R N EAR+ H R + +P T + N G F++GF K + ++ + ++ P
Sbjct: 376 RPPQRLFNETEARKRHPR-HIQGNPTTKVW--NYMGDEFENGFQVKDIKIQQLVVTDVNP 432
Query: 191 TFDELEKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKV 247
T +E+ +F + E+G ++ A S+L + ++ GD + V +G+ K + G V
Sbjct: 433 TLEEVTRFASGAEDGTENLDLKALASSLKDSNINVAYLPGDIIEVYEGEQKGVVGKATNV 492
Query: 248 DEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQA-GATGMVLKVEQHVLI 305
+ V ++ L + + V +K L K F G+HVKV SG++ GMV+K+ + +
Sbjct: 493 QGDIVTMQVTEGVLAGQVIEVPTKGLRKRFRIGDHVKVTSGSRFRDEVGMVVKISEDRVT 552
Query: 306 ILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVL 365
L+D T ++ VF+ D+ E+S++ G +G YEL DLV LD + G I++V+ E+ VL
Sbjct: 553 FLTDQTNTEVTVFSKDLREASDIG-GQGSLGQYELFDLVQLDPTTVGCIVKVDRESVVVL 611
Query: 366 KGVPDRPEVALVKLREIKCKLEKK--SNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
D +V +I KL K+ + DR + + + DVVR G + +QG + HI
Sbjct: 612 DQNGDARQVMP---SQIANKLPKRKIAVAADRTGSEIRLDDVVREYGG--QQRQGKIIHI 666
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSP- 482
+R +F+H+ E+AG K+ + + A G R A + + P + ++P
Sbjct: 667 HRAYVFLHNNDSNENAGVFVTKAGNVNTIA---AKGGRVLSAGPNLDQMN--PAMKRNPN 721
Query: 483 GRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMK 542
G S+ PP GG D + TV +R G YKG G V D RVEL ++ K
Sbjct: 722 GSESKMAPPKS------FGGRDRAIDKTVIIRKGGYKGLLGIVKDATDTHARVELHTKSK 775
Query: 543 VVTVDRSMIS-DNVVVSTPYRDTPRYG-----------------MGSETPMH---PSRTP 581
+TV + +S + + R G TP+ P RTP
Sbjct: 776 TITVPKDHLSFKDKITGAKIEINGRGRGGHSGPPGGGRGGHGDWQGGRTPVATNGPERTP 835
Query: 582 LHPYMTPMRDAGATPI-------HDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWG-- 632
TP G TP + G RTP AW R + DGN ++G
Sbjct: 836 AWGSRTPAPTGGRTPAWKSSGPDYSGSRTP----AW-----ADGSRTAYGDGNRTAYGGG 886
Query: 633 -TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGG 691
+P +Q G+ + A++A GS + GG+ +G+ + Y + +P P GG
Sbjct: 887 SRTPAWQSGA-KTPAHDAFGLGSKTPAYGGGDAWGSGS---KTPAYGSGSAP-TPGASGG 941
Query: 692 QP--MTPNSASYLPGTPGGQPM-TPGTGGLDAMSP 723
TP + Y TPGG + P G L+A +P
Sbjct: 942 DSWGYTPGQSGYDAPTPGGALLGAPTPGALNAPTP 976
>gi|255940628|ref|XP_002561083.1| Pc16g07580 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585706|emb|CAP93428.1| Pc16g07580 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1015
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 248/829 (29%), Positives = 379/829 (45%), Gaps = 163/829 (19%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIY-SQKVML 53
+QK I++ GS IR + A + ++ + Y EA ++A V E G+ Y SQK+ L
Sbjct: 222 IQKRIEERPPGSRNPIRIISAFERGNIMQGWFYCEARRQADVTEGLDGINFYYPSQKLTL 281
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID-- 111
VP++EM D+L V K+ +L W+R+K G Y GDLA++ +V+ VTV+L+PR+D
Sbjct: 282 VPVKEMPDLLRVH-KSEELLPGGWIRIKRGKYMGDLAQIEEVETNGLNVTVRLVPRLDYG 340
Query: 112 LQALANKLEGREVAKKKPFV----PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGM 167
L A + +K+ V PP R + EA++ H + + G + N
Sbjct: 341 LNDDAFGAPAADAKRKRGAVNTVRPPQRLFSETEAKKKHAKYLSSTSGLGGKSW-NYLNE 399
Query: 168 LFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKKGHF 224
+ DGFL K + ++ ++A+N+ P +E+ F GE+G + D+ASL+ TL + + +
Sbjct: 400 NYVDGFLIKDMRVQHLNAKNVNPRLEEVTMFARGGEDGTANLDLASLAETLKNSTAEESY 459
Query: 225 MKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNH 281
GD V V +G+ + L G + V ++ E+ G +T+ + L K F G+H
Sbjct: 460 QPGDPVEVYRGEQQGLIGRTVSTRGDIVSLQVTEGELAG--QTIDAPVRTLRKRFREGDH 517
Query: 282 VKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYEL 340
VKV+ G++ GMV++V+ + +LSD + ++I +F+ D+ S+E+ ++G Y++
Sbjct: 518 VKVIGGSRYQNELGMVVQVKDDTVTLLSDMSMQEITIFSKDLRLSAEMAAD-GQLGIYDV 576
Query: 341 RDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSN--VQDRNKN 398
DLV LD + +I+V+ E+ +V V + + +I K+ + + DRN
Sbjct: 577 HDLVQLDAATVACVIKVDRESLRV---VDQNGSIRNILPTQIANKITPRRDAVATDRNGA 633
Query: 399 TVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRAN 458
+ D VR V G + + G + HI+R LF+H++ E+AG + + VV S
Sbjct: 634 EIRSGDTVREVYG--EQRSGVIRHIHRSFLFLHNKAQAENAGI--SVVRTTNVVTVSARG 689
Query: 459 GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPY 518
G G ++ N P Q+PG + PP R G D L+G TV +R G Y
Sbjct: 690 GRPTGPDLTKMN----PALAMQTPGGGTAMPPP--------RRGRDHLIGKTVTIRKGRY 737
Query: 519 KGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHP- 577
KG G V D S +VEL + K V V R ++ TP P
Sbjct: 738 KGLVGIVRDADDNSAQVELYTSNKPVHVPRDIL---------------------TPKDPV 776
Query: 578 SRTPLH--------------PYMT--PMRD---AGATPI--HDGMRTPMRDRAWNPYTPM 616
S+ PL PY + P RD G TPI D RTP AWN +
Sbjct: 777 SKQPLSMGRGRGGGGPGGRTPYTSGGPGRDGWAGGRTPIAAADSSRTP----AWNSASAR 832
Query: 617 SPPRDN--------WE----------DGNPGSWG----TSPQYQPGSP----PSRAYEAP 650
+P W+ +GN ++G +P + GS S ++A
Sbjct: 833 TPAWGGLSGSRTPAWKNDGSRTANPYEGNRTAYGGVGSRTPSWTSGSKTPYDSSSGFDAF 892
Query: 651 TPGS---GW---------------------------ASTPGGNYSDAGTPRDSSSTYVNA 680
GS GW A TPGGNYS A TP Y A
Sbjct: 893 ASGSRTPGWNAGANTGSRTPGWNSMAAGRDQRDFDDAPTPGGNYS-APTP----GAYA-A 946
Query: 681 PSPYLPSTPGGQPM---TPNSASYLPGTPGGQPMTPGTGGLDAMSPVIG 726
P+P P TPGG P TP A P TPGG P TP DA +P +G
Sbjct: 947 PTPGAP-TPGGWPESAPTPGGAFSAP-TPGGAP-TPAA--FDAPTPAMG 990
>gi|347827342|emb|CCD43039.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1081
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 234/824 (28%), Positives = 372/824 (45%), Gaps = 133/824 (16%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K +IY+EA ++A + A GL N+Y + K+MLV I+EM D+L V +K+ + +VR+
Sbjct: 280 MKGFIYVEAQRQADILTAMDGLMNVYPRTKMMLVEIKEMPDLLRV-TKSPTVEVGAYVRL 338
Query: 81 KIG-NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFV---PPPRF 136
+ Y GDLA+V++V + + V+ +PR+D + G + +K+P PP R
Sbjct: 339 RRPVKYAGDLAQVLEVTDTGLELRVRYVPRLDYGLHEDTSVGADGKRKRPVAGPRPPQRL 398
Query: 137 MNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDEL 195
+ EA++ H + ++ R D T +YF + +G+ K V ++++ +++ PT +E+
Sbjct: 399 FSEAEAKKRHAKHLQGRPDTKTWNYFNE----EYINGYCEKEVKIQALITKDVNPTLEEV 454
Query: 196 EKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
+F + E+G ++ A ++L A+ ++ GD + V +G+ K + G V + V
Sbjct: 455 TRFASGAEDGTENLDLNALAASLKASTANASYLPGDVIEVYEGEQKGVVGKAVSVTGDIV 514
Query: 253 HIRPEMKGL-PKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDT 310
+ L +T+ + K L K F G+HVKV+ G++ GMV+K+ + + +LSD
Sbjct: 515 TMAVSEGALRGQTIEIPIKGLRKRFREGDHVKVIGGSRFRDEVGMVVKIIEDRVTLLSDQ 574
Query: 311 TKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPD 370
+I VF+ D+ E+S+ + G +G YEL DLV LD ++ II+V+ E+ VL
Sbjct: 575 NNNEITVFSKDLREASD-SGGSGALGKYELWDLVQLDPSTVACIIKVDRESLVVLD---Q 630
Query: 371 RPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL 428
V +I KLEK+ N DRN + ++D V+ G + + G + HI+R L
Sbjct: 631 NGSNRTVIPSQISNKLEKRRNAVATDRNGAEIKMEDTVKEFGG--EARSGRILHIHRAYL 688
Query: 429 FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRG 488
F+ E+AG A+++S V A G R + S + P + +P +
Sbjct: 689 FLKSSELSENAGIFVARTTSVQSV---SAKGGRITENASSPDLNSMNPAMKLNPKNNGQM 745
Query: 489 GPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDR 548
PP G D +G TV +R GPYKG G V D + RVEL ++ KV++V +
Sbjct: 746 LPPK-------SFGRDKSIGQTVTIRKGPYKGLLGIVKDTTDTNARVELHTKSKVISVPK 798
Query: 549 SMISDNVVVSTPYRD--------------------------TP----RYGMGSETPM--- 575
+ +S D TP G G TPM
Sbjct: 799 DCLGFKDKISGASVDPNGFRGGPGGGRGGGAPRGRGGFGGATPGPGWDSGAGGRTPMPGG 858
Query: 576 HPSRTPLH--------------PYMTPMRDAGATP------------IHDGMRTPM---- 605
P RTP + + D G TP +DG RT
Sbjct: 859 LPERTPAWGRTPHGGAQGGRTPAWKSGSTDGGRTPGWSNDGSRTVYAANDGSRTAYGGGN 918
Query: 606 RDRAWN--PYTPMSPPRDNW--------EDGNPG-SWGT-SPQYQPGSPPSR-------- 645
R AW+ TP DN+ GN G +WG+ +P YQP +
Sbjct: 919 RTPAWSSGAKTPAYGLSDNYGSKTPAYGGSGNSGDAWGSKTPAYQPNNANDNWNSGQSNN 978
Query: 646 -----AYEAPTPGSGWASTPGGNYSDAGTPRDSSS---TYVNAPSP--YLPSTPG----G 691
AY+APTPG G S P +A TP S+ +NAP+P Y TP G
Sbjct: 979 NNWGTAYDAPTPG-GPLSAPTPAAMNAPTPGGYSAPTPAAMNAPTPGAYSAPTPAPGYWG 1037
Query: 692 QPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFM 735
P + PG PG P G A +P ++GP ++
Sbjct: 1038 APTPQAMDAPTPG-PGYYAGAPTPGAYAADTPAGNWQDDGPRYV 1080
>gi|303321271|ref|XP_003070630.1| KOW motif containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240110326|gb|EER28485.1| KOW motif containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 1051
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 204/670 (30%), Positives = 327/670 (48%), Gaps = 73/670 (10%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+ Y+YIEA K+A V +A L N++ K+ L+ ++EM D+L V+ K+ +L WVR+
Sbjct: 275 MSGYVYIEARKQADVMDALDNLSNVFIRSKLTLISVKEMPDLLRVQ-KSEELQPGGWVRI 333
Query: 81 KIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN-KLEGREVAKKKP------FVPP 133
K G Y+GDLA++ +V+ VTV+L+PR+D + ++ + +K+P PP
Sbjct: 334 KRGKYQGDLAQIEEVETNGLEVTVRLVPRLDYGLNDDVQIPNGDTKRKRPGGKSAVARPP 393
Query: 134 PRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
R + EA++ H R + G + +G + DGFL K + ++ + +N+ P D
Sbjct: 394 QRLFSEAEAKKRHGRYLSAAAGLGGKSWTYLGDT-YIDGFLIKDMKIQHLITKNVNPQLD 452
Query: 194 ELEKFRTPGENG--ESDIASLS-TLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEE 250
E+ KF ++G D+ASL+ +L + ++ GD V V G+ K + G V +
Sbjct: 453 EVTKFARGADDGTVNLDLASLAASLKDTTGEDSYVPGDTVEVFSGEQKGVVGRVIAGRAD 512
Query: 251 NVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLII 306
V I+ E++G + L V K L K F G+HVKV+ G++ GMV++++ + +
Sbjct: 513 IVSIKVVEGELEG--QRLEVPVKGLRKRFREGDHVKVIGGSKYRDELGMVVRIKDDRVTL 570
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELRDLVLLDNNSFGVIIRVESEAFQVL 365
L+D + ++I VF+ D+ E+ +V G+ K+G Y++ DLV LD + G II+++ E+ +V+
Sbjct: 571 LTDMSMQEITVFSKDLREAEDV--GVDGKLGQYDVHDLVQLDQTTVGCIIKLDRESMKVI 628
Query: 366 KGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
V + + K+E + N DRN + D VR V G + + G + H+
Sbjct: 629 D---QHGSVRTLLPSRVLGKIEHRRNAVTTDRNGAEIKYGDTVREVAG--EQRLGVILHV 683
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R LF+ + ++AG I +++S+ V V S + G S+ N P + Q G
Sbjct: 684 HRAFLFLQSKVVGDNAGIIVSRASNVVTVATSGGSLAPRGPDLSKMN-----PAL-QRNG 737
Query: 484 RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKV 543
G PP G D VG TV +R GPYKG G V D RVEL S KV
Sbjct: 738 MNGSGMPPPRTV------GRDRTVGKTVTIRKGPYKGLLGIVKDTTDDIARVELHSVSKV 791
Query: 544 VTVDRSMISDNVVVSTPYRDTP---------RYGMGSETPMHPSRTPLHPYMTPMRDAGA 594
V V++ +N+ + P P G TP S P P G
Sbjct: 792 VPVEK----ENLTIKDPITGQPIDLRQFGRGAGRGGPRTPQGTSAAP--PRAQSAWQGGR 845
Query: 595 TPI--HDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQP-GSPPSRAYEAPT 651
TPI +D RTP AW + +P W G+ +P ++ GS AY+A
Sbjct: 846 TPIAANDSSRTP----AWRASSSRTPA---WNAAASGA--RTPAWKTDGSRTVNAYDA-- 894
Query: 652 PGSGWASTPG 661
G+ ST G
Sbjct: 895 ---GYKSTLG 901
Score = 43.1 bits (100), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 23/156 (14%)
Query: 564 TPRYGMGSETPMHPSRTPLHPYMTPMRDA---GA-TPIHDGMRTPMRDRAWNPYTPMS-- 617
TP + GS+TP H S + DA GA TP H G R AW + S
Sbjct: 904 TPAWAAGSKTPHHASSGFGGSSSSSGFDAFLAGARTPAHTGTLGGSRTPAWGHSSGSSGK 963
Query: 618 -----PPRDNWEDGNPGSWGTSPQYQPGSPPSRAYE--APTPGSGWASTPGGNYSDAGTP 670
P ++ +P ++GT+P P R + APTPG+ A TPG +G P
Sbjct: 964 AFDAPTPGGDYAAPSPAAFGTAPTPGATGPTPRPWNDAAPTPGATSAPTPGA----SGYP 1019
Query: 671 RDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP 706
ST +A LP+TPG + Y GTP
Sbjct: 1020 ----STSTSAGGMGLPATPGA--LDDGGPRYEEGTP 1049
>gi|294654359|ref|XP_456409.2| DEHA2A01628p [Debaryomyces hansenii CBS767]
gi|218511835|sp|Q6BZG0.2|SPT5_DEBHA RecName: Full=Transcription elongation factor SPT5; AltName:
Full=Chromatin elongation factor SPT5
gi|199428819|emb|CAG84361.2| DEHA2A01628p [Debaryomyces hansenii CBS767]
Length = 967
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 207/740 (27%), Positives = 338/740 (45%), Gaps = 84/740 (11%)
Query: 2 QKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTD 61
++ + + + L+I +V D K YIYIEA K ++ A G+ NIY+++ +LVP+RE D
Sbjct: 269 KRTLARSNPLEILTVFQRDSFKGYIYIEAKKPEAIERALTGMVNIYAKQRLLVPVREYPD 328
Query: 62 VL-AVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN-KL 119
+L V+S +++ +VR+ G YK DLA V ++ V KL+PR+D +
Sbjct: 329 LLKQVKSSDVEIVPGIYVRITRGKYKNDLAIVDNLSENGLDVRCKLVPRLDYGKNDDFDK 388
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+G+ + K P PR + EAR ++ R P Y G + +GFL+K
Sbjct: 389 DGKRIRSKTK--PIPRLFSEQEARMYDGEYLQSGRGPRAFIYR----GEEYNEGFLFKDF 442
Query: 179 SMKSISAQNIQPTFDELEKFRT--PGENGESDIASLSTLFANR-------KKGHFMKGDA 229
++ I +++ P +EL++F+T P E+G D+A+++ N+ + F GD
Sbjct: 443 KLQFIQTKDVHPKLEELDRFQTGDPEEDG-LDLAAIAASLKNKNNSEGAGRSSAFQPGDK 501
Query: 230 VIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPK----TLAVNSKELCKYFEPGNHVKVV 285
V + +G+ G V + I G PK L V + +L K F G+HV+V+
Sbjct: 502 VEIRRGEQAKTIGKVLSTSLNEITILVTDSGDPKFVNQRLTVPANDLRKLFSAGDHVRVI 561
Query: 286 SGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKI-GDYELRDLV 344
G + TG+V+K++ +I+LSD TK+D+RVFA+ ++++++ ++ G Y+L DLV
Sbjct: 562 EGKHSDETGLVIKIDNDSVILLSDQTKQDVRVFANYLIKATDASSNTDVTGGKYDLNDLV 621
Query: 345 LLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ---DRNKNTVA 401
L+ ++ GVI++ E +F+VL + V I KLE Q DRN +TV
Sbjct: 622 QLNVSTVGVIVKAEKSSFEVL---TSEGRLMSVNPAGIASKLELSRREQIATDRNGSTVK 678
Query: 402 VKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAG-FICAKSSSCVVVGGSRANGD 460
+ D V+ V G K ++G + HIY+ LFI LE+ G F+ + +
Sbjct: 679 IGDTVKEVLGDKK-REGAILHIYKNSLFIKSNEILENLGVFVTNCMNVSTITTKDSIVSK 737
Query: 461 RNGDAYSRFN-SLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYK 519
G +R N +L+ P I AG + R GG D L+ V V G YK
Sbjct: 738 SLGPDLNRMNPNLKLPNPIAN-----------AGLKTR--VGGRDKLIYKDVLVNSGNYK 784
Query: 520 GYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVV--------------STPYRDTP 565
G G+V + R+EL ++ K + V ++ +S V+V S P P
Sbjct: 785 GLMGKVTEADEVYARIELHTKSKKIKVTKNSLS--VLVRGEAIPYLRFIGASSGPGNSNP 842
Query: 566 RYGMGSETPMHPSRTPLH--PYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNW 623
G + P++TP + GATP G T AW
Sbjct: 843 SGNFGGASFNQPAKTPAFSSGGKSSWGSGGATPSVGGGAT-----AWGS----------- 886
Query: 624 EDGNPGSW--GTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAP 681
G SW G +P Y G+ + A S W + G + ++ S+
Sbjct: 887 -GGAQSSWGGGKTPAYNSGNASTWGGNAG-GASAWGNNNGNASTWGSNSKNGGSSTWGGN 944
Query: 682 SPYLPSTPGGQPMTPNSASY 701
S + S GG+ N +++
Sbjct: 945 STWGNSNKGGKSSWGNGSAW 964
>gi|119180397|ref|XP_001241674.1| hypothetical protein CIMG_08837 [Coccidioides immitis RS]
gi|392866464|gb|EAS27920.2| transcription initiation protein spt5 [Coccidioides immitis RS]
Length = 1048
Score = 222 bits (565), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 203/670 (30%), Positives = 327/670 (48%), Gaps = 73/670 (10%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+ Y+Y+EA K+A V +A L N++ K+ L+ ++EM D+L V+ K+ +L WVR+
Sbjct: 272 MSGYVYVEARKQADVMDALDNLSNVFIRSKLTLISVKEMPDLLRVQ-KSEELQPGGWVRI 330
Query: 81 KIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN-KLEGREVAKKKP------FVPP 133
K G Y+GDLA++ +V+ VTV+L+PR+D + ++ + +K+P PP
Sbjct: 331 KRGKYQGDLAQIEEVETNGLEVTVRLVPRLDYGLNDDVQIPNGDTKRKRPGGKSAVARPP 390
Query: 134 PRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
R + EA++ H R + G + +G + DGFL K + ++ + +N+ P D
Sbjct: 391 QRLFSEAEAKKRHGRYLSAAAGLGGKSWTYLGDT-YIDGFLIKDMKIQHLITKNVNPQLD 449
Query: 194 ELEKFRTPGENG--ESDIASLS-TLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEE 250
E+ KF ++G D+ASL+ +L + ++ GD V V G+ K + G V +
Sbjct: 450 EVTKFARGADDGTVNLDLASLAASLKDTTGEDSYVPGDTVEVFSGEQKGVVGRVIAGRAD 509
Query: 251 NVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLII 306
V I+ E++G + L V K L K F G+HVKV+ G++ GMV++++ + +
Sbjct: 510 IVSIKVVEGELEG--QRLEVPVKGLRKRFREGDHVKVIGGSKYRDELGMVVRIKDDRVTL 567
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELRDLVLLDNNSFGVIIRVESEAFQVL 365
L+D + ++I VF+ D+ E+ +V G+ K+G Y++ DLV LD + G II+++ E+ +V+
Sbjct: 568 LTDMSMQEITVFSKDLREAEDV--GVDGKLGQYDVHDLVQLDQTTVGCIIKLDRESMKVI 625
Query: 366 KGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
V + + K+E + N DRN + D VR V G + + G + H+
Sbjct: 626 D---QHGSVRNLLPSRVLGKIEHRRNAVTTDRNGAEIKYGDTVREVAG--EQRLGVILHV 680
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R LF+ + ++AG I +++S+ V V S + G S+ N P + Q G
Sbjct: 681 HRAFLFLQSKVVGDNAGIIVSRASNVVTVATSGGSLAPRGPDLSKMN-----PAL-QRNG 734
Query: 484 RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKV 543
G PP G D VG TV +R GPYKG G V D RVEL S KV
Sbjct: 735 MNGSGMPPPRTV------GRDRTVGKTVTIRKGPYKGLLGIVKDTTDDIARVELHSVSKV 788
Query: 544 VTVDRSMISDNVVVSTPYRDTP---------RYGMGSETPMHPSRTPLHPYMTPMRDAGA 594
V V++ +N+ + P P G TP S P P G
Sbjct: 789 VPVEK----ENLTIKDPITGQPIDLRQFGRGAGRGGPRTPQGTSAAP--PRAQSAWQGGR 842
Query: 595 TPI--HDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQP-GSPPSRAYEAPT 651
TPI +D RTP AW + +P W G+ +P ++ GS AY+A
Sbjct: 843 TPIAANDSSRTP----AWRASSSRTPA---WNAAASGA--RTPAWKTDGSRTVNAYDA-- 891
Query: 652 PGSGWASTPG 661
G+ ST G
Sbjct: 892 ---GYKSTLG 898
Score = 43.9 bits (102), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 66/156 (42%), Gaps = 23/156 (14%)
Query: 564 TPRYGMGSETPMHPSRTPLHPYMTPMRDA---GA-TPIHDGMRTPMRDRAWNPYTPMS-- 617
TP + GS+TP H S + DA GA TP H G R AW + S
Sbjct: 901 TPAWAAGSKTPHHASSGFGGSSSSSGFDAFLAGARTPAHTGALGGSRTPAWGHSSGSSGK 960
Query: 618 -----PPRDNWEDGNPGSWGTSPQYQPGSPPSRAYE--APTPGSGWASTPGGNYSDAGTP 670
P ++ +P ++GT+P P R + APTPG+ A TPG +G P
Sbjct: 961 AFDAPTPGGDYAAPSPAAFGTAPTPGATGPTPRPWNDAAPTPGATSAPTPGA----SGYP 1016
Query: 671 RDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP 706
ST +A LP+TPG + Y GTP
Sbjct: 1017 ----STSTSAGGMGLPATPGA--LDDGGPRYEEGTP 1046
>gi|350632224|gb|EHA20592.1| hypothetical protein ASPNIDRAFT_50479 [Aspergillus niger ATCC 1015]
Length = 1049
Score = 221 bits (563), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 224/773 (28%), Positives = 367/773 (47%), Gaps = 83/773 (10%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ GS I+ + A + + YIY+EA ++A V +A + + N+Y + K++L
Sbjct: 245 IQKRIEERPPGSRNPIKIMSAFERGGAMAGYIYVEARRQADVMDALQDMTNVYPRTKMIL 304
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP+REM D+L V+ K+ +L WVR+K G Y+GDLA++ +V+ VTV+LIPR+D
Sbjct: 305 VPVREMPDLLRVQ-KSEELMPGGWVRIKRGKYQGDLAQIEEVETNGLAVTVRLIPRLDYG 363
Query: 114 ALANKLEGREVA---KKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENI 164
N+ G ++ +K+P + PP R + EA++ H + + G + N
Sbjct: 364 --MNEDIGAPISDPKRKRPGMNPAVARPPQRAFSEAEAKKKHAKYLSATSGLGGKSW-NY 420
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKK 221
G + DGFL K + ++ + +N+ P +E+ F E+G S D+ASL+ TL + +
Sbjct: 421 LGETYVDGFLIKDLKVQHLITKNVNPRLEEVTMFARGSEDGTSNLDLASLAETLKNSAAE 480
Query: 222 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + L G + V + L +T+ K L K F G+
Sbjct: 481 DSYLPGDPVEVFRGEQQGLIGRTSSTRGDIVTLLVTEGDLAGQTIDAPVKSLRKRFREGD 540
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDY 338
HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+ S+E TG+ K+G +
Sbjct: 541 HVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLRLSAE--TGVDGKLGMF 598
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKL--EKKSNVQDRN 396
++ DLV LD + I++V+ E+ +VL + + ++ K+ K + DRN
Sbjct: 599 DVHDLVQLDAATVACIVKVDRESLRVLD---QNGSIRTILPTQVANKITPRKDAVATDRN 655
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ D VR V G + + G + HI+R LF+H++ E++G + ++++ V V S
Sbjct: 656 GAEIRHGDTVREVYG--EQRNGVIIHIHRSFLFLHNKAQAENSGIVVVRTTNVVTV--SA 711
Query: 457 ANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLG 516
G G ++ N +P GPP G D ++G TV VR G
Sbjct: 712 KGGRSTGPDLTKMNPALMRNGVPG-----GMMGPPQKSF------GRDRMIGKTVMVRKG 760
Query: 517 PYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMH 576
P+KG G V D RVEL S+ K++++ + ++ V+ D R G P
Sbjct: 761 PFKGLVGIVKDSTDMQARVELHSKNKLISIPKDILVVKDPVTGQTIDMGRGRGGPRVPHG 820
Query: 577 PSRTPLHPYM---TPM--RDAGATPIHDG---MRTPM-------RDRAW--------NPY 613
S P + TPM D+ TP G RTP R AW NPY
Sbjct: 821 GSGGPPSAWQGGRTPMGAGDSSRTPAWGGPSSSRTPAWAGMGGSRTPAWKQDGSRTSNPY 880
Query: 614 TPMSPPRDNWEDGNPGSWGT---SPQYQPGSPPSRAYEAPTPGSGWASTPGGN----YSD 666
+ P +W +P G+ A+ A + W S+ GN ++
Sbjct: 881 DGSQTAYGGFGSRTP-AWNAGARTPYVGSGNSDFDAFAAGSRTPAWGSSNAGNRTPAWAG 939
Query: 667 AGTPRDSSSTYVNAPSP--YLPSTPG--GQPMTPNSASYLPGTPGGQPMTPGT 715
A + +AP+P Y TPG G TP ++ PG TPG
Sbjct: 940 ASASNGTKDRGYDAPTPGGYSAPTPGAYGSAPTPGVSAPTPGAWADSAPTPGA 992
>gi|393216414|gb|EJD01904.1| transcription elongation factor Spt5 [Fomitiporia mediterranea
MF3/22]
Length = 935
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 220/765 (28%), Positives = 352/765 (46%), Gaps = 136/765 (17%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPI 56
M+K +D+ LQI S D L IY+EA V +A GL ++ S+ + LVPI
Sbjct: 199 MRKAMDQEFTAKPLQILSAFQRDSLPGMIYVEARSSQQVSQAINGLVGVFLSRGITLVPI 258
Query: 57 REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ--- 113
EM +L ++ K I ++ +WVR++ G Y GDLA+V+D+ + V +K +PRIDL
Sbjct: 259 EEMATLLQIKKKDIVVTPGSWVRIRRGKYSGDLAQVLDIAESGEEVGLKFVPRIDLNPKD 318
Query: 114 ------ALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGM 167
KL+G ++ PP RF N +E ++V RR +
Sbjct: 319 EIVSADGKKRKLKGSGMSSVSR--PPQRFFNYEEV----VKVYGRRAVAKRNQVYVFNND 372
Query: 168 LFKDGFLYKTVSMKSISAQNIQPTFDELEKF--RTPGENGESDIASLSTLFANRKKGH-- 223
F+DG++ K + ++ +N+ PT DE+ KF R G E+++ LS + KK
Sbjct: 373 TFRDGYIEKDFKLATLILENVNPTLDEIMKFTRREDGAENEANV-DLSIIAETAKKEAIQ 431
Query: 224 -FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP---EMKGLPKTLAVNSKELCKYFEPG 279
GD V V +G+ + G VE + + V +R +++G + + V ++ + K F+ G
Sbjct: 432 VLQPGDHVEVFEGEQTGVHGVVESIANDVVTLRAIGVDIEG--QKVDVPARSVRKRFKVG 489
Query: 280 NHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYE 339
+HVKV+SG A TG+V+ V +V+ LSD T +++ VF+ D+ E++EV +G+YE
Sbjct: 490 DHVKVMSGQNADETGLVVSVVDNVVTFLSDMTMQELSVFSKDLREAAEVGLSTNIVGNYE 549
Query: 340 LRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKN 398
L DLV LD+ + GVI + E ++F+VL +V LV+ +I + + + D +
Sbjct: 550 LHDLVQLDSQTVGVIFKTERDSFRVLD---QNGQVRLVQPHQIAMRRDSNRAIATDAEGH 606
Query: 399 TVAVKDVVRIVEGPCKGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRA 457
+ + D V+ V+G + ++G V HI++ F+ +R E+ G ++ S V + +
Sbjct: 607 ELRINDNVKEVDG--EERKGQVLHIHQSFYAFLFNREISENDGVFVTRARSLVSL-APKG 663
Query: 458 NGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGR--NRGGRGGHDALVGTTVKVRL 515
N + G + + P + G GG ++ RG D LVG TV V
Sbjct: 664 NAPKPG----AMDLTKMNPAL---------SGGAVGGMVGSQMSRGPRDNLVGQTVVVIK 710
Query: 516 GPYKGYRGRVVDVKGQSVRVELESQMKVVTVDR--------------------------- 548
GP KG+ G V D G RVEL+ +V+T+D+
Sbjct: 711 GPQKGFVGIVKDTNGPVARVELQMGNRVITIDKMKLKRKNPDGTTGNLEKGLVDKGALGK 770
Query: 549 ----------------SMISDNVVVSTPYRD--------TPRYGMG----------SETP 574
+ + N+ STP + TP +G G S TP
Sbjct: 771 AFSRLMMPPPSFGGSLAGLGGNMARSTPTANPYNNGGGRTPGWGAGRTPNPYASDSSRTP 830
Query: 575 MHPSRTPLHPYMTPMRDAGATPIHD-GMRTPMRDRAWN--PYTPMSPPRDNWEDGNPG-S 630
+RTP +PY +D TP + G RTP AWN TP D ++GN +
Sbjct: 831 GWGARTP-NPY---TQDGSRTPAWNAGARTP----AWNHPARTPNPYTADREKEGNRTPA 882
Query: 631 W----GTSPQYQP------GSPPSRAYEAPTPGSGWASTPGGNYS 665
W G +P +QP G S +++ G A T G +S
Sbjct: 883 WNINVGRTPAHQPDNSNDWGGGSSPRWQSGQSTWGGADTWGETFS 927
>gi|341884145|gb|EGT40080.1| hypothetical protein CAEBREN_29120 [Caenorhabditis brenneri]
Length = 1330
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 150/476 (31%), Positives = 260/476 (54%), Gaps = 37/476 (7%)
Query: 1 MQKC--IDKGSE-LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M+KC ++ +E QI+SV+ + LK IYIEA K++HV A +G + + +VPI+
Sbjct: 223 MRKCLAVEHTNEPFQIKSVVVKEGLKGMIYIEAFKQSHVMSAIEGFSALNQFTITMVPIK 282
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ---- 113
+M DVL V L ++VR+K +K DLA V VD + RV +KLIPR+D Q
Sbjct: 283 DMVDVLRVVKDIPQLKLGSYVRLKRTMFKDDLAVVDLVDIAQNRVNLKLIPRVDYQRRRG 342
Query: 114 ALANKLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGF 173
A+ + + K++P P+ + D +E+ + +T F G ++ GF
Sbjct: 343 AMRTEADKTYKLKRRPM---PKLFDQDAIKEVGGEI------VTDGDFIMFEGNHYRRGF 393
Query: 174 LYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVI 233
LYK + ++ A ++PT ELEKF+ ++ + ++ + S + F+ GD V V
Sbjct: 394 LYKYFPINAVQADGVKPTLGELEKFQESSDDLKRELETTSL---KDTENPFVPGDIVEVK 450
Query: 234 KGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
G+L NL+G V VD V + PE + L + + +N+ EL K+F+ G+H KV++G G T
Sbjct: 451 SGELVNLRGKVMTVDGTKVVMMPEQEDLKEAITLNASELRKHFKEGDHAKVIAGRYEGQT 510
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNN-SFG 352
G++++V+ + I+L+D E+++V D+ ++VTTG+ +G ++ DLV LD + G
Sbjct: 511 GLIVRVKDNTAIVLADLGMEELKVRVRDLQLCADVTTGVDSLGQFQYHDLVQLDTTGTVG 570
Query: 353 VIIRVESEAFQVLK--GVPDR--PEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRI 408
VIIR+E E +VL GV +R P+ A++ ++++ + V D N+V KD+V+I
Sbjct: 571 VIIRLEKEHLEVLNMHGVVNRIKPQ-AIIGKKDVRF-----AKVLDSQNNSVEAKDLVKI 624
Query: 409 VEGPCKGKQ-------GPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRA 457
+ GP ++ G V + +R +F++ R +++G + K ++ G +
Sbjct: 625 IGGPNTKERESDEDPVGEVLYAFRQTVFVYARKIAKNSGVLVCKPKQLLLQGAKKT 680
>gi|134058612|emb|CAK38596.1| unnamed protein product [Aspergillus niger]
Length = 1052
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 224/773 (28%), Positives = 367/773 (47%), Gaps = 83/773 (10%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ GS I+ + A + + YIY+EA ++A V +A + + N+Y + K++L
Sbjct: 238 IQKRIEERPPGSRNPIKIMSAFERGGAMAGYIYVEARRQADVMDALQDMTNVYPRTKMIL 297
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP+REM D+L V+ K+ +L WVR+K G Y+GDLA++ +V+ VTV+LIPR+D
Sbjct: 298 VPVREMPDLLRVQ-KSEELMPGGWVRIKRGKYQGDLAQIEEVETNGLAVTVRLIPRLDYG 356
Query: 114 ALANKLEGREVA---KKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENI 164
N+ G ++ +K+P + PP R + EA++ H + + G + N
Sbjct: 357 --MNEDIGAPISDPKRKRPGMNPAVARPPQRAFSEAEAKKKHAKYLSATSGLGGKSW-NY 413
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKK 221
G + DGFL K + ++ + +N+ P +E+ F E+G S D+ASL+ TL + +
Sbjct: 414 LGETYVDGFLIKDLKVQHLITKNVNPRLEEVTMFARGSEDGTSNLDLASLAETLKNSAAE 473
Query: 222 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + L G + V + L +T+ K L K F G+
Sbjct: 474 DSYLPGDPVEVFRGEQQGLIGRTSSTRGDIVTLLVTEGDLAGQTIDAPVKSLRKRFREGD 533
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDY 338
HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+ S+E TG+ K+G +
Sbjct: 534 HVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLRLSAE--TGVDGKLGMF 591
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKL--EKKSNVQDRN 396
++ DLV LD + I++V+ E+ +VL + + ++ K+ K + DRN
Sbjct: 592 DVHDLVQLDAATVACIVKVDRESLRVLD---QNGSIRTILPTQVANKITPRKDAVATDRN 648
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ D VR V G + + G + HI+R LF+H++ E++G + ++++ V V S
Sbjct: 649 GAEIRHGDTVREVYG--EQRNGVIIHIHRSFLFLHNKAQAENSGIVVVRTTNVVTV--SA 704
Query: 457 ANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLG 516
G G ++ N +P GPP G D ++G TV VR G
Sbjct: 705 KGGRSTGPDLTKMNPALMRNGVPG-----GMMGPPQKSF------GRDRMIGKTVMVRKG 753
Query: 517 PYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMH 576
P+KG G V D RVEL S+ K++++ + ++ V+ D R G P
Sbjct: 754 PFKGLVGIVKDSTDMQARVELHSKNKLISIPKDILVVKDPVTGQTIDMGRGRGGPRVPHG 813
Query: 577 PSRTPLHPYM---TPM--RDAGATPIHDG---MRTPM-------RDRAW--------NPY 613
S P + TPM D+ TP G RTP R AW NPY
Sbjct: 814 GSGGPPSAWQGGRTPMGAGDSSRTPAWGGPSSSRTPAWAGMGGSRTPAWKQDGSRTSNPY 873
Query: 614 TPMSPPRDNWEDGNPGSWGT---SPQYQPGSPPSRAYEAPTPGSGWASTPGGN----YSD 666
+ P +W +P G+ A+ A + W S+ GN ++
Sbjct: 874 DGSQTAYGGFGSRTP-AWNAGARTPYVGSGNSDFDAFAAGSRTPAWGSSNAGNRTPAWAG 932
Query: 667 AGTPRDSSSTYVNAPSP--YLPSTPG--GQPMTPNSASYLPGTPGGQPMTPGT 715
A + +AP+P Y TPG G TP ++ PG TPG
Sbjct: 933 ASASNGTKDRGYDAPTPGGYSAPTPGAYGSAPTPGVSAPTPGAWADSAPTPGA 985
>gi|317038158|ref|XP_001401698.2| transcription elongation factor SPT5 [Aspergillus niger CBS 513.88]
Length = 1053
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 224/773 (28%), Positives = 367/773 (47%), Gaps = 83/773 (10%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ GS I+ + A + + YIY+EA ++A V +A + + N+Y + K++L
Sbjct: 239 IQKRIEERPPGSRNPIKIMSAFERGGAMAGYIYVEARRQADVMDALQDMTNVYPRTKMIL 298
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP+REM D+L V+ K+ +L WVR+K G Y+GDLA++ +V+ VTV+LIPR+D
Sbjct: 299 VPVREMPDLLRVQ-KSEELMPGGWVRIKRGKYQGDLAQIEEVETNGLAVTVRLIPRLDYG 357
Query: 114 ALANKLEGREVA---KKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENI 164
N+ G ++ +K+P + PP R + EA++ H + + G + N
Sbjct: 358 --MNEDIGAPISDPKRKRPGMNPAVARPPQRAFSEAEAKKKHAKYLSATSGLGGKSW-NY 414
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKK 221
G + DGFL K + ++ + +N+ P +E+ F E+G S D+ASL+ TL + +
Sbjct: 415 LGETYVDGFLIKDLKVQHLITKNVNPRLEEVTMFARGSEDGTSNLDLASLAETLKNSAAE 474
Query: 222 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + L G + V + L +T+ K L K F G+
Sbjct: 475 DSYLPGDPVEVFRGEQQGLIGRTSSTRGDIVTLLVTEGDLAGQTIDAPVKSLRKRFREGD 534
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDY 338
HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+ S+E TG+ K+G +
Sbjct: 535 HVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLRLSAE--TGVDGKLGMF 592
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKL--EKKSNVQDRN 396
++ DLV LD + I++V+ E+ +VL + + ++ K+ K + DRN
Sbjct: 593 DVHDLVQLDAATVACIVKVDRESLRVLD---QNGSIRTILPTQVANKITPRKDAVATDRN 649
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ D VR V G + + G + HI+R LF+H++ E++G + ++++ V V S
Sbjct: 650 GAEIRHGDTVREVYG--EQRNGVIIHIHRSFLFLHNKAQAENSGIVVVRTTNVVTV--SA 705
Query: 457 ANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLG 516
G G ++ N +P GPP G D ++G TV VR G
Sbjct: 706 KGGRSTGPDLTKMNPALMRNGVPG-----GMMGPPQKSF------GRDRMIGKTVMVRKG 754
Query: 517 PYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMH 576
P+KG G V D RVEL S+ K++++ + ++ V+ D R G P
Sbjct: 755 PFKGLVGIVKDSTDMQARVELHSKNKLISIPKDILVVKDPVTGQTIDMGRGRGGPRVPHG 814
Query: 577 PSRTPLHPYM---TPM--RDAGATPIHDG---MRTPM-------RDRAW--------NPY 613
S P + TPM D+ TP G RTP R AW NPY
Sbjct: 815 GSGGPPSAWQGGRTPMGAGDSSRTPAWGGPSSSRTPAWAGMGGSRTPAWKQDGSRTSNPY 874
Query: 614 TPMSPPRDNWEDGNPGSWGT---SPQYQPGSPPSRAYEAPTPGSGWASTPGGN----YSD 666
+ P +W +P G+ A+ A + W S+ GN ++
Sbjct: 875 DGSQTAYGGFGSRTP-AWNAGARTPYVGSGNSDFDAFAAGSRTPAWGSSNAGNRTPAWAG 933
Query: 667 AGTPRDSSSTYVNAPSP--YLPSTPG--GQPMTPNSASYLPGTPGGQPMTPGT 715
A + +AP+P Y TPG G TP ++ PG TPG
Sbjct: 934 ASASNGTKDRGYDAPTPGGYSAPTPGAYGSAPTPGVSAPTPGAWADSAPTPGA 986
>gi|378725862|gb|EHY52321.1| hypothetical protein HMPREF1120_00535 [Exophiala dermatitidis
NIH/UT8656]
Length = 1108
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 219/805 (27%), Positives = 362/805 (44%), Gaps = 119/805 (14%)
Query: 1 MQKCID-KGSELQIRSVIALDH----LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLV 54
M+K ++ +GS +R A + + YI++EA ++ V +A + ++Y + K+ LV
Sbjct: 273 MKKFVESQGSRNPMRICSAFERGDGPMAGYIFVEARRKVDVDDALTNVADVYPRSKMNLV 332
Query: 55 PIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID--L 112
P++EM D+L V +K+ +L +VR+K G Y+GDL + V+ VTV+L+PR+ +
Sbjct: 333 PVKEMPDLLRV-NKSKELEVGGYVRIKRGLYQGDLGMIESVETNGLEVTVRLVPRLTYGM 391
Query: 113 QALANKLEGREVAKKKPFV----------PPPRFMNVDEARELHIRVERRRDPMTGDYFE 162
+ + +K+P PP R N +EAR+ H R ++ +TG +
Sbjct: 392 DEDQQRPGAVDAKRKRPNAFGGLNSVANRPPQRLFNENEARKRHDRFLQQNRGLTGRSW- 450
Query: 163 NIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANRK 220
+ G L++DGFL K ++ + N+ P DE+ K +G D+ SL+ N
Sbjct: 451 SYKGELYEDGFLIKDFKLQHLITDNVNPRLDEITKLTKTAADGSELLDLESLAHSLRNTA 510
Query: 221 -KGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHI---RPEMKGLPKTLAVNSKELCKYF 276
+G ++ GD V V +G+ K + G +E V + I E+ G + + V K L K F
Sbjct: 511 AEGSYLPGDEVEVYEGEQKGIVGRIEAVTGNIISIMVTEGELTG--QLVEVPVKGLRKRF 568
Query: 277 EPGNHVKVVSGTQA-GATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKI 335
G++VK++ G++ GMVL+++ + +L++ + ++I VF+ D+ E+++
Sbjct: 569 REGDNVKIIGGSKYRDEVGMVLRIKDDKVTVLTNESNDEITVFSKDLREATDAGGAGAGA 628
Query: 336 GDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--Q 393
++++DLV +D+ + G +IR + E+ ++L D+ ++ ++E + N
Sbjct: 629 SKFDVQDLVQIDSTTAGCVIRSDRESVRIL----DQNGSVTTRIPSQLMRIEARRNAVAT 684
Query: 394 DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVG 453
D+N + + V DVVR E +GK G + HI+RG +F H++ ++E+AG A+ S+ +
Sbjct: 685 DKNGSEIRVGDVVR--ESGGEGKSGTILHIHRGFVFAHNKLNIENAGIWVARCSNVITTA 742
Query: 454 GSRANGDRNGDAYSRFN---SLRTPPRI---PQSPGRYSRGGPPAGGRNRGGRGGHDALV 507
S+ N L+ P PQ PGR D L
Sbjct: 743 AKGGRITAPATDLSKMNPALQLKRPDMSMAPPQRPGR-------------------DPLQ 783
Query: 508 GTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTV---DRSMISDNVVVSTPYRDT 564
G V + GPYKG+R V D R+EL+++ K + V D S++ N T Y D
Sbjct: 784 GRFVHINKGPYKGHRALVKDTTAGEARLELQTKNKTINVSKFDLSVVDTNTQNKTRYEDW 843
Query: 565 PRY-----GMGSETPMHPSRTPLHPYMTPMRDAGATP--IHDGMRTPM-----RDRAWNP 612
R GM + M SR P + G TP + DG RTP R AW
Sbjct: 844 IRSRGGPSGMRAGQGMPGSRIPDSGF------GGRTPMGVMDGGRTPAWGAASRTPAWGG 897
Query: 613 YTPMSPPRDNWEDGNPGSW----GTSPQYQ---------PGSPPSRAYEAPTPGSGWAST 659
S E G +W G+ Y PG+ + P +G A T
Sbjct: 898 PNSSSA----LESGRTPAWKGPSGSQTAYGGGGMTSYGGPGNYSTTGSRTPAWTAG-AKT 952
Query: 660 PGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTP--------------NSASYLPGT 705
P G G+ +S A S P+ TP + SY T
Sbjct: 953 PYGADHGFGSSNNSGFDAFAAGS-RTPAYTASSSRTPAWGGPGASASAPTPAARSYDAPT 1011
Query: 706 PGGQPMTPGTGGL---DAMSPVIGA 727
PG TP G DA +P +GA
Sbjct: 1012 PGISAPTPAASGHYDDDAYTPYLGA 1036
>gi|429854633|gb|ELA29633.1| transcription initiation protein spt5 [Colletotrichum
gloeosporioides Nara gc5]
Length = 1000
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 213/703 (30%), Positives = 332/703 (47%), Gaps = 84/703 (11%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA++ + A G+ N+Y + K++LV I++M D+L V +K L WVR+
Sbjct: 260 MKGYIYVEANRSTDIMVALDGMFNVYPRSKMILVDIKDMPDLLRV-TKTPTLEPGAWVRL 318
Query: 81 -KIGNYKGDLAKVVDVDNVRQRVTVKLIPRID-------LQALANKLEGREVAKKKPFVP 132
K + GDLA+V+DV V+ IPR+D L AL + + + P
Sbjct: 319 RKPAKHAGDLAQVIDVTENGLEARVRFIPRLDYGMRDDALAALTSDGKRKRPVGVPGPRP 378
Query: 133 PPRFMNVDEARELHIRVERRRDPMT------GDYFENIGGMLFKDGFLYKTVSMKSISAQ 186
P R N EAR+ H R + +P T GD FEN GF K + ++ +
Sbjct: 379 PQRLFNETEARKRHPR-HIQGNPTTKVWTYMGDEFEN--------GFQVKDIKIQQLVVT 429
Query: 187 NIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH----FMKGDAVIVIKGDLKNLKG 242
++ PT +E+ +F + E+G ++ L L A+ K + ++ GD + V G+ K + G
Sbjct: 430 DVNPTLEEVTRFASGAEDGTENL-DLKALAASLKDSNINVTYLPGDVIEVYDGEQKGVVG 488
Query: 243 WVEKVDEENVHIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVE 300
V + V ++ E + + + V +K L K F+ G+HVKV SG++ GMV+K+
Sbjct: 489 KATNVQGDIVTMQVTEGDLVGQVIEVPTKGLRKRFKIGDHVKVTSGSRFRDEVGMVVKIS 548
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
+ + L+D T ++ VF+ D+ E+S++ G +G YEL DLV LD + G I++V+ E
Sbjct: 549 EDRVTFLTDQTNTEVTVFSKDLREASDIG-GQGALGQYELFDLVQLDPTTVGCIVKVDRE 607
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
+ VL D +V +I KL K++ DRN + + + DVVR E + +QG +
Sbjct: 608 SVVVLDQNGDTRQVMP---SQIANKLPKRN--ADRNGSEIRLDDVVR--EYGAQQRQGKI 660
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
HI+R +F+H ++ E+AG K+S+ + A G R A + + P + +
Sbjct: 661 IHIHRAYVFLHSNNNNENAGVFVTKASNVTTIA---AKGGRVLSAGPNLDQMN--PAMKR 715
Query: 481 SPG-RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELES 539
+PG S+ PP G D + TV +R G YKG G V D RVEL +
Sbjct: 716 NPGGAESKMAPPK-------TFGRDRSINQTVIIRKGGYKGLLGIVKDATETHARVELHT 768
Query: 540 QMKVVTVDRSMIS---DNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGA-- 594
+ K +TV + +S N P TP+ +GA
Sbjct: 769 KSKTITVPKDHLSFKDKNTGAKIDINGRGPRPGQGGAPGGGRGGDWQGGRTPVASSGAER 828
Query: 595 -------TPIHDGMRTPMRDRAWNPY-----TPMSPPRDNWEDGNPGSWGTSPQYQPGSP 642
TP G RTP + Y TP W DG+ ++G PG+
Sbjct: 829 TPAWGSRTPAPTGGRTPAWKSSSQDYGSGSRTPA------WADGSRTAYGDGSAPTPGAS 882
Query: 643 PSRAYEAPTPG-SGW-ASTPGGNYSDAGTPRDSSSTYVNAPSP 683
S ++ TPG SG+ A TPGGN A TP +NAP+P
Sbjct: 883 GSDSW-GYTPGNSGYDAPTPGGNLLGAPTP-----GALNAPTP 919
>gi|367048231|ref|XP_003654495.1| hypothetical protein THITE_2145375 [Thielavia terrestris NRRL 8126]
gi|347001758|gb|AEO68159.1| hypothetical protein THITE_2145375 [Thielavia terrestris NRRL 8126]
Length = 1076
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 227/791 (28%), Positives = 358/791 (45%), Gaps = 121/791 (15%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA ++ V A G+ N+Y + K+MLV I++M D+L V +K +L WVR+
Sbjct: 285 MKGYIYVEARRQNDVMIALDGILNVYPRTKMMLVEIKDMPDLLRV-TKTPNLEPGAWVRL 343
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEG------REVAKKKPFVPP 133
K + GDLA+V+DV V+ IPR+D + L R+ PP
Sbjct: 344 KKPAKHAGDLAQVLDVTENGLEARVRFIPRLDYGVRDDALSSLTPDGKRKRPGMPGPRPP 403
Query: 134 PRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
R + EAR+ H R + +P T + G F++GF K + ++ + +++ PT +
Sbjct: 404 QRLFSEVEARKRHPR-HIQGNPQTNTW--TYMGEDFENGFQVKDIKIQHLEVKDVNPTLE 460
Query: 194 ELEKFRTPGENGESDIASLSTLFANRKKGH--FMKGDAVIVIKGDLKNLKGWVEKVDEEN 251
E+ KF + E+G ++ L L A+ K + ++ GD + V +G+ + + G V V +
Sbjct: 461 EVTKFASGSEDGTENL-DLKALAASLKDNNVTYVPGDVIEVFEGEQRGVVGRVTNVQGDI 519
Query: 252 VHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSD 309
V ++ L +T+ V +K L K F G+HVKV+ G++ GM++K+ + + +++D
Sbjct: 520 VTLKVTEGDLAGQTIEVPNKGLRKRFRTGDHVKVIGGSRFRDEVGMIVKIVEDRVTLVTD 579
Query: 310 TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVP 369
T +I VF+ D+ E+S++ G +G Y L DLV LD + G I++V+ E+ VL
Sbjct: 580 QTNTEITVFSKDLREASDIG-GQGSLGQYSLLDLVQLDPTTVGCIVKVDRESMVVLD--- 635
Query: 370 DRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGI 427
E V +I KL K+ DRN + + + DVVR G + +QG + HI+R
Sbjct: 636 QNGETRQVLPSQIANKLPKRRTAVAADRNGSEIRLDDVVREYGG--QQRQGKIIHIHRSF 693
Query: 428 LFIHDRHHLEHAGFICAKSSSCVVVG--GSRANGDRNGDAYSRFNSLRTPPRIPQSPGRY 485
+F+H E+AG ++ + + G R N G S N P + ++P
Sbjct: 694 VFLHSNATTENAGVFVTRAGNVTTIAAKGGRINNANTGPDLSTMN-----PALKRNPAGN 748
Query: 486 SRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVT 545
+ PP G D + TV +R G YKG G V D RVEL + K++T
Sbjct: 749 NNMPPPK-------SFGPDRAINQTVSIRRGGYKGLMGIVKDTTDSHARVELHGRNKIIT 801
Query: 546 VDRS-MISDNVVVSTP---YRDTPRYGM----------------GSETPMHP-------- 577
V ++ +I + V P Y + R G GS TPM
Sbjct: 802 VPKADLIFRDKVTGKPIDIYSRSGRGGFGAPARGGFGGPGEWSGGSRTPMGAGGGERTPA 861
Query: 578 --------------------SRTP--------LHPYMTPMRDAGATPIHDGMRTPMRDRA 609
SRTP ++PY G + G RTP A
Sbjct: 862 WGSSKSIARTPAWGRAETSGSRTPAWGDGSRTVNPYDGNRTAYGGATAYGGSRTP----A 917
Query: 610 WNPYTPMSPPRDNWEDGNP----GSWGTSPQYQPGSPPSRAYEAPTPGS----GWASTP- 660
W+ + +P D + G+ G+ G+ P P+ APTPG+ W TP
Sbjct: 918 WS-SSAKTPAHDGFGHGSKTPAYGAGGSDPWGS--KTPAYGVSAPTPGASGADSWGYTPG 974
Query: 661 --GGNYS-DAGTPRDSSSTYVNAPSPYLPSTPG-GQPMTPNSASYLPGTPGGQPMTPGTG 716
GG+++ DA TP + AP+P + P G P A+ TPG G G
Sbjct: 975 PSGGSHAFDAPTP----GAGLGAPTPAALNAPTPGAYSAPTPAAISAPTPGA--WQGGWG 1028
Query: 717 GLDAMSPVIGA 727
A +P +GA
Sbjct: 1029 ADAAPTPAVGA 1039
>gi|398397301|ref|XP_003852108.1| hypothetical protein MYCGRDRAFT_71868 [Zymoseptoria tritici IPO323]
gi|339471989|gb|EGP87084.1| hypothetical protein MYCGRDRAFT_71868 [Zymoseptoria tritici IPO323]
Length = 987
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 217/756 (28%), Positives = 344/756 (45%), Gaps = 113/756 (14%)
Query: 26 IYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGN 84
+Y+EA ++ V A G+ +++ K +++P+ EM D+L SK+ DL +VR + G
Sbjct: 261 LYVEAWRQDDVTSAFDGITHVFMGTKPLMIPLEEMPDLLRT-SKSKDLEPGMYVRPRRGL 319
Query: 85 YKGDLAKVVDVDNVRQRVTVKLIPRIDL------QALANKLE--GREVAKKKPFV----- 131
Y GDLA+V DV+ +KL+PR+D A A +E G+ K+K
Sbjct: 320 YAGDLAQVDDVEQNGTTAVLKLVPRLDYGLTEDANAAAPTMEPDGQGGVKRKRVQKPIGQ 379
Query: 132 -PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQP 190
P R + EAR+ H + + ++ + N + DGFL +T + ++ +++ P
Sbjct: 380 RPSARLFSETEARKKHSKYLSKAGGLSNSSW-NYQNKTYVDGFLLETFKISALQVEDVNP 438
Query: 191 TFDELEKFRTPGENGES--DIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVD 248
T +E+ KF +G D+ +LS ++ GD V + +G+ K G +V
Sbjct: 439 TLEEVTKFVAGDGDGTENLDLVALSATLKTSAGADYLPGDKVEIFRGEQKGATGRAVEVY 498
Query: 249 EENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLII 306
E V +R E + +T+ ++L K F G+HVKV+ G++ GMV++ + I
Sbjct: 499 GEVVKMRVEQGQMAGQTIEAPIRDLRKMFREGDHVKVIGGSKYQDEVGMVVRTNGEQITI 558
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLK 366
L+D+T+++I +FA D+ E+++ + G+ Y+L DLV LD ++ G + +V+ E+ +VL
Sbjct: 559 LTDSTQQEISLFAKDLREATD-SGGVVGASKYDLFDLVQLDASTVGCVTKVDRESLRVLD 617
Query: 367 GVPDRPEVALVKLREIKCKLEKKSN---VQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
+ + + I K+EKK + D N + D ++ V G +G+ G V +
Sbjct: 618 QLGNSRNLLPSN---ISNKIEKKRDQAPATDHLGNEIKSDDTIKEVGG--EGRSGKVLQV 672
Query: 424 YRGILFIHDRH-HLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSP 482
RG +F R ++AG A++S+ V A G R G ++ N+ P +
Sbjct: 673 QRGFVFAQSRELRGDNAGVFVARTSNVETVA---AKGGRIGPDLTKMNTALRP-----NG 724
Query: 483 GRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMK 542
G + PP + G D +VG TVK+R G +KG G V D S VEL ++ K
Sbjct: 725 GGAAPMPPPM-------QKGRDRVVGRTVKIRKGQHKGLIGIVKDSTDSSCLVELHAKNK 777
Query: 543 VVTVDRSMIS-----DNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPY--MTPMR----- 590
+ VD++M+S VVV D +G G PS+TP P TP R
Sbjct: 778 KINVDKAMLSVIDPDTGVVVCA---DARAFGTG-----RPSQTPGRPMGAATPFRGGPPT 829
Query: 591 --DAGATPIH---DGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY-------- 637
G TP + G RTP + TP + G++G + Y
Sbjct: 830 GMSGGRTPAYAAAGGGRTPAWKQDAGGRTPAYATGGGGQTAYGGNFGGATSYGGATSYGG 889
Query: 638 -------------------QPGSPPS--------RAYEAPTPGSGWASTPGGNYSDAGTP 670
P PS EAPTPG A TP GNY+ A TP
Sbjct: 890 ATSYGGGGSGSTWNANGGRTPAPYPSGGRTPAYQSGMEAPTPGFHSAPTP-GNYASAPTP 948
Query: 671 RDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP 706
Y +P +TPGG P TP A+Y P TP
Sbjct: 949 ----GAYGQYQTPAAYATPGGFPETP--AAYSPETP 978
>gi|401885772|gb|EJT49860.1| hypothetical protein A1Q1_01012 [Trichosporon asahii var. asahii CBS
2479]
gi|406695564|gb|EKC98867.1| hypothetical protein A1Q2_06838 [Trichosporon asahii var. asahii CBS
8904]
Length = 1514
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 162/563 (28%), Positives = 280/563 (49%), Gaps = 51/563 (9%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVES 67
S + + SV D L IY+EA + A V A +G+ +Y S+ + LVPI EM +L ++
Sbjct: 587 SGIPVISVFYRDSLPGLIYLEARQSADVNSALQGIVGVYLSRGIQLVPIEEMAPLLRIKK 646
Query: 68 KAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVT-VKLIPRIDLQALANKLE---GRE 123
K IDL WVR+K G + GDLA+V+D+D + V VK +PRID+ K E +
Sbjct: 647 KEIDLVPGMWVRLKRGKHTGDLAQVIDIDQLTSGVVGVKFVPRIDMTPREKKTERLGNGK 706
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
F PP + N +E R ++ + R F+ G + DGF YK + + +
Sbjct: 707 GGLGGNFRPPQKLFNYEEVRRVYGKQNVRHGQGNSHIFD---GDEYIDGFCYKDMKIALL 763
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGW 243
+ +++QPT +E+ F G D+++++ + GD V V +G+L + G
Sbjct: 764 TTEDVQPTLEEVSTFSGEDATGRIDLSTIADANRSISASFLTPGDQVEVFEGELTGILGK 823
Query: 244 VEKVDEENVHIRP---EMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
VE ++ + + I+ E+ G +T+ V ++ + K F+ G HVK+ +G A +GM++ V
Sbjct: 824 VETIEGDTISIKAIGGEIHG--QTVEVPARSVRKKFDVGEHVKITNGKNANVSGMIVDVN 881
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTG-----ITKIGDYELRDLVLLDNNSFGVII 355
V+ ++SD +++I+VF+ DV ++++V +G + G YE +LV+LD+ + GVI
Sbjct: 882 GEVVTLMSDQGQQEIKVFSKDVRKAADVASGDSATVTQQQGLYEPHELVMLDSTTAGVIT 941
Query: 356 RVESEAFQVL--KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPC 413
+VE +VL G+ V LR + + D + D ++ +G
Sbjct: 942 KVEGSMLRVLDQNGMHRTVSTNEVTLRRDNARYAVAT---DSTGAELRCGDKMKETDG-- 996
Query: 414 KGKQGPVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGD---RNGDAYSRF 469
+ ++G V +I R I F+H+R + E+ G A+++S V + +A+ D +N ++
Sbjct: 997 ENRRGEVINISRSIFVFLHNREYSENNGVFVARATSLVSL-TPKASTDLTKQNPALNAQL 1055
Query: 470 NSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK 529
+ + P PP NR ++ T V V G YKG G + DV
Sbjct: 1056 HQMNLMP-------------PPQSVGNR-------RIINTPVVVTRGTYKGLLGTIKDVV 1095
Query: 530 GQS-VRVELESQMKVVTVDRSMI 551
G + RVEL + K +T+ + +
Sbjct: 1096 GAAEARVELATNNKTITIQTAFL 1118
>gi|425765660|gb|EKV04330.1| Transcription initiation protein spt5 [Penicillium digitatum Pd1]
Length = 1026
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 242/817 (29%), Positives = 376/817 (46%), Gaps = 130/817 (15%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIY-SQKVML 53
+QK I++ GS IR + A + ++ + Y EA ++A V E + Y SQK+ L
Sbjct: 224 IQKRIEERPAGSRNPIRIISAFERGNIMQGWFYCEARRQADVIEGLDAINFYYPSQKLTL 283
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID-- 111
VP++EM D+L V+ K+ +L W+R+K G Y GDLA++ +V+ VTV+L+PR+D
Sbjct: 284 VPVKEMPDLLRVQ-KSEELLPGGWIRIKRGKYIGDLAQIEEVETNGLNVTVRLVPRLDYG 342
Query: 112 LQALANKLEGREVAKKKPFV----PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGM 167
+ A + +K+ V PP R + EA++ H + + G + +
Sbjct: 343 MNDDAFGAPAPDAKRKRGAVSTVRPPQRLFSETEAKKKHAKYLSSTSGLGGKSWNYLNDN 402
Query: 168 LFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKKGHF 224
+ DGFL K + ++ ++A+N+ P +E+ F GE+G + D+ASL+ TL + + +
Sbjct: 403 -YVDGFLIKDMRVQHLNAKNVNPRLEEVTMFARGGEDGTANLDLASLAETLKNSTAEDSY 461
Query: 225 MKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNH 281
GD V V +G+ + L G + V ++ E+ G +T+ + L K F G+H
Sbjct: 462 QPGDPVEVYRGEQQGLIGRTVSTRGDIVSLQVTEGELAG--QTIDAPVRTLRKRFREGDH 519
Query: 282 VKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYEL 340
VKV+ G++ GMV++V+ + +LSD + ++I +F+ D+ S+E+ ++G Y++
Sbjct: 520 VKVIGGSRYQNELGMVVQVKDDTVTLLSDMSMQEITIFSKDLRLSAEMAAD-GQLGIYDV 578
Query: 341 RDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKN 398
DLV LD + +I+V+ E+ +V V + + +I K+ + + DRN
Sbjct: 579 HDLVQLDAATVACVIKVDRESLRV---VDQNGSIRNILPTQIANKITPRRDAVATDRNGA 635
Query: 399 TVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRAN 458
+ D VR V G + + G + HI+R LF+H++ E+AG A + VV S
Sbjct: 636 EIRSGDTVREVYG--EQRSGVIRHIHRSFLFLHNKAQAENAGI--AVVRTTNVVTVSARG 691
Query: 459 GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPY 518
G G ++ N P ++PG + PP R G D L+G TV +R G Y
Sbjct: 692 GRPTGPDLTKMN----PALAMRTPGGGAAMPPP--------RRGRDQLIGKTVTIRKGRY 739
Query: 519 KGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPS 578
KG G V D S +VEL + K V + R +++ VS + G G
Sbjct: 740 KGLVGIVRDADDSSAQVELYTSNKPVHIPRDILTPKDPVS---KQPLSMGRGRGGGGPGG 796
Query: 579 RTPLHPYMTPMRDA---GATPI--HDGMRTPMRDRAWNPYTPMSPPRDN--------WE- 624
RTP P RD+ G TPI D RTP AWN +P W+
Sbjct: 797 RTPHTSSGGPRRDSWAGGRTPIAAADSSRTP----AWNGAAARTPAWGGVSGSRTPAWKN 852
Query: 625 ---------DGNPGSWG----TSPQYQPGSP----PSRAYEAPTPGS---GW-------- 656
DGN ++G +P + GS S ++A GS GW
Sbjct: 853 DGSRTANPYDGNRTAYGGVGSRTPSWTSGSKTPYDSSSGFDAFASGSRTPGWNAGGANTG 912
Query: 657 --------------------ASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPM-- 694
A TPGGNYS A TP Y AP+P P TPGG P
Sbjct: 913 GRTPGWNSMSASRDQREFDDAPTPGGNYS-APTP----GAYA-APTPGAP-TPGGWPESA 965
Query: 695 -TPNSASYLPGTPGGQPM----TPGTGGLDAMSPVIG 726
TP A P TPGG P DA +P +G
Sbjct: 966 PTPGGAFSAP-TPGGPSKRDYDAPTPAAFDAPTPTMG 1001
>gi|402086018|gb|EJT80916.1| transcription elongation factor spt-5 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1042
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 222/772 (28%), Positives = 360/772 (46%), Gaps = 136/772 (17%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA++ + A G+ N+Y + K+MLV I++M D+L V +K L WVR+
Sbjct: 252 MKGYIYVEANRSTDILMALDGMLNVYPRTKMMLVEIKDMPDLLRV-TKTPTLEPGAWVRL 310
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDL----QALANKL--EGREVAKKKPFVPP 133
+ + GDLA+V+DV V+ IPR+D +A+++ L +G+ P V P
Sbjct: 311 RRPFKHAGDLAQVMDVTENGLEARVRFIPRLDYGVRDEAVSSALTADGKRKRAVGPGVKP 370
Query: 134 P-RFMNVDEARELHIRVERRRDPMTGDYFENI---GGMLFKDGFLYKTVSMKSISAQNIQ 189
P R + EAR+ H R +TG+ N+ G F++GF K + ++ ++ +++
Sbjct: 371 PQRLFSEVEARKRHPR------NVTGNAQSNVWTYNGEEFENGFQVKDIKIQQLTVKDVN 424
Query: 190 PTFDELEKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEK 246
P+ +E+ KF + ++G ++ A ++L N ++ GD + V G+ K + G
Sbjct: 425 PSLEEVSKFASGADDGTENLDLKALAASLQGNMSNVAYLAGDIIEVYDGEQKGVVGRATS 484
Query: 247 VDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQH 302
+ + V ++ ++KG +T+ V +K L K F G+HVKV+ G++ GMV+K+
Sbjct: 485 IQGDIVTLQVTEGDLKG--QTIEVPTKGLRKRFSEGDHVKVIGGSRFRDEVGMVVKISGD 542
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
+ +L+D T +I VF+ D+ E+S++ G +G Y L DL+ LD + G I++++ E+
Sbjct: 543 RVTLLTDQTNTEITVFSKDLREASDIG-GQGSLGQYSLLDLIQLDPTTVGCIVKIDRESL 601
Query: 363 QVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEH 422
VL D ++A ++ K K + DRN + + + DVV+ G + +QG + H
Sbjct: 602 TVLDQNGDIRQLAPSQVTN-KLPKRKTAVAADRNGSEIRLDDVVKEFGG--QRRQGKIIH 658
Query: 423 IYRGILFIHDRHHLEHAGFICAKSSS--CVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
I+R +++H E+AG ++S+ + G R N G + N P
Sbjct: 659 IHRSFVYLHSSTTSENAGVFVTRASNVNTIAAKGGRVNTTSLGPDLNAMN--------PA 710
Query: 481 SPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQ 540
+ G PA + R G D +G TV VR G YKG G V D RVEL ++
Sbjct: 711 LKRNVAGNGMPAPQQQR--SMGRDRALGQTVSVRRGGYKGLLGIVKDTTDTHARVELHTK 768
Query: 541 MKVVTVDRS--MISDNVV---------------------------VSTPYRD-TPRY--G 568
K++ V ++ + D + +T Y TP G
Sbjct: 769 NKIIMVPKADLIFKDKITGRPIDINVRGGSRGGFGGGSGGRGGYGGATDYGGRTPSAGDG 828
Query: 569 MGSETPMHPSRTPLH-PYMTPMRDAGA-TPI------------HDGMRTPM------RDR 608
G TP S+ H P +GA TP +DG RT R
Sbjct: 829 AGGRTPAWGSKPTSHTPAWGRSEPSGARTPAWAIADGSRTVNPYDGSRTAYGGGSGSRTP 888
Query: 609 AWNPYTPMSPPRDNWEDGN----------------------PG-----SWGTSPQYQPG- 640
AW+ +P D++ G+ PG +WG Y PG
Sbjct: 889 AWSLGGSKTPAHDSFSGGSKTPAWNPSGSKTPAYGGLSAPTPGASTSDAWG----YTPGP 944
Query: 641 SPPSRAYEAPTPGSGW-ASTPGGNYSDAGTPRDSSSTYVNAPSPYLPS-TPG 690
S S AY+APTPG+G A TPGG +A TP S Y +AP+P + + TPG
Sbjct: 945 SGGSHAYDAPTPGAGLGAPTPGG--LNAPTP----SAYPSAPTPAVSAPTPG 990
>gi|240281702|gb|EER45205.1| transcription initiation protein spt5 [Ajellomyces capsulatus H143]
Length = 806
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 216/746 (28%), Positives = 353/746 (47%), Gaps = 95/746 (12%)
Query: 43 LRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQR 101
+ N+Y++ K++L+ ++EM D+L V +K+ +L WVR+K G Y+GDLA++ DV+
Sbjct: 1 MSNVYTKSKMILISVKEMPDLLRV-TKSEELIPGGWVRIKRGKYQGDLAQLEDVETNGLD 59
Query: 102 VTVKLIPRID--LQALANKLEGREVAKKKPFV------PPPRFMNVDEARELHIRVERRR 153
VTV+L+PR+D L G +V +K+P V PP R + EA++ H +
Sbjct: 60 VTVRLVPRLDYGLNEDMGAPNG-DVKRKRPGVGSTIARPPQRPFSEAEAKKKHAKYLSAT 118
Query: 154 DPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLS 213
+ G + +G + DGFL K + ++ + +N+ P DE+ KF ++G +++ +
Sbjct: 119 SGLGGKTWNYLGDN-YVDGFLIKDMKVQHLITKNVNPQLDEVTKFARGADDGTANLDLAA 177
Query: 214 TLFANRK---KGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAV 267
+ + + ++ GD V V +G+ + + G + V ++ E++G + + V
Sbjct: 178 LAASLKNTTTEDSYLPGDTVEVFQGEQQGVVGKTVSTRGDIVSVKVTQGELEG--QQIDV 235
Query: 268 NSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESS 326
K L K F+ G+HVKV+ G++ GMV++++ + +LSD + ++I VF+ D+ E++
Sbjct: 236 PIKGLRKRFQEGDHVKVIGGSRFRDELGMVVRIKDDRVTLLSDMSMQEITVFSKDIREAA 295
Query: 327 EVTTGIT-KIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCK 385
+ G+ K+G Y++ DLV LD + G II+++ E+ +VL V V ++ K
Sbjct: 296 DA--GVDGKLGMYDVHDLVQLDQATVGCIIKLDRESMRVLD---QNGSVRNVLPSQVMNK 350
Query: 386 LEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFIC 443
+ ++ N DRN + + D VR G + + G + HI+R LF+ ++ ++AG I
Sbjct: 351 IPQRRNAVSTDRNGSEIRCGDTVREFTG--EQRTGAILHIHRSFLFLKNKDASDNAGIIV 408
Query: 444 AKSSSCVVVGGSRAN-GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGG 502
++S+ V S R+ +SR N P I Q G G PP G
Sbjct: 409 TRASNVTTVATSGGRLASRSAPDFSRMN-----PAI-QKNGMNGSGMPPPKSF------G 456
Query: 503 HDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYR 562
D +G TV +R GP+KG G V D RVEL S+ KV+TVD+ M+S V+T
Sbjct: 457 RDRTIGKTVTIRKGPFKGLLGIVKDTTDTQARVELHSKNKVITVDKDMLSIKEYVTT--- 513
Query: 563 DTPRYGMGSETPMHPSRTPL------------------HPYMTPMRDAGATPIHDGMRTP 604
+P +G HP R+P+ TP + A P G RTP
Sbjct: 514 -SPPTKLGCNAD-HP-RSPITGASIDLSRYGGRGGGGVGRGRTPHSSSAAPPDWSGSRTP 570
Query: 605 M------RDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWAS 658
+ R AW + +P W T GS S Y+A G
Sbjct: 571 LAANDSSRTPAWRSSSSRTP---AWGSATASGSRTPAWKADGSRTSNPYDASRTAYGGGR 627
Query: 659 TPGGNYSDAGTPRDSSSTYVN---------APSPYLPSTPGGQPMTPNSASYLPGTPGGQ 709
TP S TP DSSS + + A P+ PG TP ++ PG+
Sbjct: 628 TPAWT-SGTKTPYDSSSGFGSSSTSGFDAFAAGSRTPAYPGAGSRTP---AWAPGSAAPP 683
Query: 710 PM---TPGTGGLDAMSPVIGADNEGP 732
P+ + GG DA +P GAD P
Sbjct: 684 PIGHSSGSKGGYDAPTP--GADYSAP 707
>gi|425779110|gb|EKV17200.1| Transcription initiation protein spt5 [Penicillium digitatum PHI26]
Length = 980
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 231/785 (29%), Positives = 364/785 (46%), Gaps = 119/785 (15%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIY-SQKVML 53
+QK I++ GS IR + A + ++ + Y EA ++A V E + Y SQK+ L
Sbjct: 224 IQKRIEERPAGSRNPIRIISAFERGNIMQGWFYCEARRQADVIEGLDAINFYYPSQKLTL 283
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID-- 111
VP++EM D+L V+ K+ +L W+R+K G Y GDLA++ +V+ VTV+L+PR+D
Sbjct: 284 VPVKEMPDLLRVQ-KSEELLPGGWIRIKRGKYIGDLAQIEEVETNGLNVTVRLVPRLDYG 342
Query: 112 LQALANKLEGREVAKKKPFV----PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGM 167
+ A + +K+ V PP R + EA++ H + + G + +
Sbjct: 343 MNDDAFGAPAPDAKRKRGAVSTVRPPQRLFSETEAKKKHAKYLSSTSGLGGKSWNYLNDN 402
Query: 168 LFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKKGHF 224
+ DGFL K + ++ ++A+N+ P +E+ F GE+G + D+ASL+ TL + + +
Sbjct: 403 -YVDGFLIKDMRVQHLNAKNVNPRLEEVTMFARGGEDGTANLDLASLAETLKNSTAEDSY 461
Query: 225 MKGDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNH 281
GD V V +G+ + L G + V ++ E+ G +T+ + L K F G+H
Sbjct: 462 QPGDPVEVYRGEQQGLIGRTVSTRGDIVSLQVTEGELAG--QTIDAPVRTLRKRFREGDH 519
Query: 282 VKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYEL 340
VKV+ G++ GMV++V+ + +LSD + ++I +F+ D+ S+E+ ++G Y++
Sbjct: 520 VKVIGGSRYQNELGMVVQVKDDTVTLLSDMSMQEITIFSKDLRLSAEMAAD-GQLGIYDV 578
Query: 341 RDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKN 398
DLV LD + +I+V+ E+ +V V + + +I K+ + + DRN
Sbjct: 579 HDLVQLDAATVACVIKVDRESLRV---VDQNGSIRNILPTQIANKITPRRDAVATDRNGA 635
Query: 399 TVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRAN 458
+ D VR V G + + G + HI+R LF+H++ E+AG A + VV S
Sbjct: 636 EIRSGDTVREVYG--EQRSGVIRHIHRSFLFLHNKAQAENAGI--AVVRTTNVVTVSARG 691
Query: 459 GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPY 518
G G ++ N P ++PG + PP R G D L+G TV +R G Y
Sbjct: 692 GRPTGPDLTKMN----PALAMRTPGGGAAMPPP--------RRGRDQLIGKTVTIRKGRY 739
Query: 519 KGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRY----------- 567
KG G V D S +VEL + K V + R +++ V P +P
Sbjct: 740 KGLVGIVRDADDSSAQVELYTSNKPVHIPRDILTPKEYVLFPNSLSPWAVEEEVVVLEGE 799
Query: 568 ------GMGSET--PMHPSRTPL--HPYM----TPMRD------AGATPIHDGMRTPMRD 607
+ ET P+ R PL HP + +R+ +G G RTP
Sbjct: 800 LRTLLPAVLGETVGPVVEPRLPLPIHPELPLGTVLLRELLLGVASGFDAFASGSRTP--- 856
Query: 608 RAWNP-----------YTPMSPPRDNWE-DGNPGSWGTSPQYQPGSPPSRAYEAPTPGS- 654
WN + MS RD E D P G PG AY APTPG+
Sbjct: 857 -GWNAGGANTGGRTPGWNSMSASRDQREFDDAPTPGGNYSAPTPG-----AYAAPTPGAP 910
Query: 655 ---GW---ASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGG 708
GW A TPGG +S A TP S +AP+P P TP T GG
Sbjct: 911 TPGGWPESAPTPGGAFS-APTPGGPSKRDYDAPTPAAFDAP-----TP--------TMGG 956
Query: 709 QPMTP 713
TP
Sbjct: 957 MAATP 961
>gi|302507360|ref|XP_003015641.1| hypothetical protein ARB_05952 [Arthroderma benhamiae CBS 112371]
gi|291179209|gb|EFE34996.1| hypothetical protein ARB_05952 [Arthroderma benhamiae CBS 112371]
Length = 1079
Score = 218 bits (555), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 222/773 (28%), Positives = 360/773 (46%), Gaps = 90/773 (11%)
Query: 8 GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVL 63
GS I+ + A + + YIY+EA K+A + +A G+ NIY K+ L+ ++EM D+L
Sbjct: 262 GSRNPIKIISAFERGGTMAGYIYVEARKQADIIDALDGMSNIYVRSKMTLISVKEMPDLL 321
Query: 64 AVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI------DLQALAN 117
V+ K+ +L+ WVR+K G Y+GDLA++ +V+ VTV+L+PR+ D A A
Sbjct: 322 RVK-KSEELTPGGWVRIKRGRYQGDLAQLEEVETNGLNVTVRLVPRLEYGLNEDSNAPAL 380
Query: 118 KLEGREVAKKKPFV--PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLY 175
+ + + + PP R + EA++ H + + G + +G + DGFL
Sbjct: 381 DPKRKRIGGGSSAIARPPQRLFSEAEAKKRHSKYLSATSSLGGKSWSYLGDT-YVDGFLI 439
Query: 176 KTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANR-KKGHFMKGDAVIV 232
K + ++ + +N+ P DE+ KF ++G S D+ASL+ N ++ ++ GD V V
Sbjct: 440 KNMKVQHLITKNVNPQLDEVTKFARGADDGTSNLDLASLAATIKNTTEEDAYLVGDTVEV 499
Query: 233 IKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ 289
G+ + + G + V I+ E++G + + V +K L K F G+HVKV+ G++
Sbjct: 500 FAGEQRGVVGQTVATRGDIVTIKVTQGELQG--QHIDVPTKGLRKRFSEGDHVKVIGGSK 557
Query: 290 -AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELRDLVLLD 347
GMV++++ + IL+D T ++I VF+ D+ E+ ++ G+ K+G Y++ DLV +D
Sbjct: 558 YRDELGMVVRIKDDRVTILTDMTMQEITVFSKDLREADDI--GVDGKLGQYDVHDLVQID 615
Query: 348 NNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDV 405
+ G +++++ E+ +V+ +V + K+E + + DRN + + D
Sbjct: 616 QTTVGCVVKLDRESMRVID---QNGSTQIVLPSRVLGKIEHRRHAVTTDRNGSEIKCGDT 672
Query: 406 VRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDA 465
V+ V G + + G + HI+R LF + ++AG + ++ + V S + R+
Sbjct: 673 VKEVTG--EQRTGTILHIHRAFLFCTSKVVGDNAGIMVTRAINVTTVATSGSKLGRSAPD 730
Query: 466 YSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRV 525
S+ N P + Q G G PP G D LVG TV +R GP+KG G V
Sbjct: 731 LSKMN-----PAL-QKNGMNGSGMPPPR------TFGRDRLVGKTVHIRRGPFKGLLGIV 778
Query: 526 VDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRY-GMGSETPMHPSR--TPL 582
D RVEL S KVV V++ +S ++ D R+ G G P P T
Sbjct: 779 KDTTDIIARVELHSVSKVVPVEKENLSVKDPITGQPVDINRFGGRGGGAPRVPQSMATGR 838
Query: 583 HPYMTPMRDAGATPIH--DGMRTPM------RDRAWNPYTPMSPPRDNWE--------DG 626
G TPI D RTP R AWN P E DG
Sbjct: 839 AGPQDAAWQGGRTPIAMGDSSRTPAWRASSSRTPAWNAAVGSRTPAWKAEGSRTANPYDG 898
Query: 627 NPGSW----GTSPQYQPGS-PPSRA------------YEAPTPGSGWASTPGGNYSDAG- 668
N S+ G +P + G+ P A ++A GS PG +++G
Sbjct: 899 NRTSYGGFGGRTPAWTSGTKTPHDAGSGFSGGSSNSGFDAFMAGSRTPGHPGAMAANSGS 958
Query: 669 -TP------RDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPG-TPGGQPMTP 713
TP SS NA + TPGG P+ A + TPG TP
Sbjct: 959 RTPAWGHSGSSSSHLSANAGRAFDAPTPGGDYAAPSPAPFASAPTPGATAATP 1011
>gi|340966775|gb|EGS22282.1| hypothetical protein CTHT_0018030 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1062
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 232/789 (29%), Positives = 356/789 (45%), Gaps = 124/789 (15%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA ++ V A G+ N+Y + K+MLV I++M D+L V +K L WVR+
Sbjct: 266 MKGYIYVEARRQTDVLIALDGMLNVYPRTKMMLVEIKDMPDLLRV-TKTPTLEPGAWVRL 324
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRID--LQALANKLEGREVAKKKPFVPPPR-- 135
K + GDLA+V+DV V+ IPR+D ++ A+ + +K+P +P PR
Sbjct: 325 KRPAKHAGDLAQVLDVTENGLEARVRFIPRLDYGVRDDASSNLTPDGKRKRPGMPAPRPP 384
Query: 136 --FMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
+ EAR+ + R +P T + G F++GF K + ++ + +++ PT +
Sbjct: 385 QRLFSEAEARKRNPRY-LSGNPQTNTW--TYMGEEFENGFQVKDIKIQWLETKDVNPTLE 441
Query: 194 ELEKFRTPGENGES--DIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEEN 251
E+ KF + GE+G D+ +L T + ++ GD + V +G+ + G V +
Sbjct: 442 EVTKFASGGEDGTENLDLKALYTSLKDSNNVTYVPGDVIEVYEGEQAGVIGKAISVQGDI 501
Query: 252 VHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIIL 307
V +R E+ G +TL V +K L K F+ G+HVKV+ G++ GMV+ + + +L
Sbjct: 502 VTLRVTEGELAG--QTLEVPNKGLRKRFQLGDHVKVIGGSRFRDEVGMVVNITDDRVTLL 559
Query: 308 SDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKG 367
SD T +I VF+ D+ E+S++ G +G Y L DLV LD + GVI++V+ E+ VL
Sbjct: 560 SDQTNTEITVFSKDLREASDIG-GQGSLGQYSLLDLVQLDPTTVGVIVKVDRESMVVLDQ 618
Query: 368 VPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYR 425
D +V +I KL K+ DRN + + + DVVR G + +QG + HIYR
Sbjct: 619 NGDTRQVMP---SQIANKLPKRRTAVAADRNGSEIRLDDVVREYGG--QQRQGKIIHIYR 673
Query: 426 GILFIHDRHHLEHAGFICAKSSSCVVVG--GSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+F+H E+AG ++ + + V G R N + D S N P + ++P
Sbjct: 674 SYVFLHSNATTENAGVFVTRAGNVMTVAAKGGRVNANAGPD-LSAMN-----PALKRNPN 727
Query: 484 RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKV 543
+ PP G D + V +R G YKG G V D RVEL S+ KV
Sbjct: 728 GTNNNMPPPKQSL-----GPDRALNQHVSIRRGVYKGMMGIVKDTTETHARVELHSKNKV 782
Query: 544 VTVDRS-MISDNVVVSTPY--------------------------------RDTPRYGMG 570
VTV ++ +I + + P TP +G
Sbjct: 783 VTVPKADLIFRDKITGKPIDIYSRGGRPAPSSSGRPGDYSGGRTLMGASGGERTPAWGSS 842
Query: 571 SETPMHP---------SRTP--------LHPYMTPMRDAGATPIHDGMRTPMRDRAWNPY 613
T P SRTP ++PY G + G RTP AW+
Sbjct: 843 KSTARTPAWGRPETSGSRTPAWGDGSRTVNPYDGSRTAYGGATAYGGSRTP----AWS-S 897
Query: 614 TPMSPPRDNWEDGNPG-SW--GTSPQYQPGSPPSRAY--EAPTPGSG---------WAST 659
+ +P D + G+ +W S + P + AY APTPG+ W T
Sbjct: 898 SAKTPAHDGFGHGSKTPAWSASASSSHDPWGSKTPAYGVSAPTPGASGSANSASDPWGYT 957
Query: 660 PGGNYSDAGTPRDSSSTYVNAPSP---YLPSTPGGQPMTPNSASYLPGTPGG-QPMTPGT 715
PG + SSS +AP+P TPG P +Y TP TPG
Sbjct: 958 PGAS--------GSSSHGYDAPTPGAALSAPTPGAALSAPTPGAYSAPTPAAISAPTPGA 1009
Query: 716 --GGLDAMS 722
GG A S
Sbjct: 1010 WQGGWGADS 1018
>gi|327297829|ref|XP_003233608.1| transcription elongation factor spt5 [Trichophyton rubrum CBS 118892]
gi|326463786|gb|EGD89239.1| transcription elongation factor spt5 [Trichophyton rubrum CBS 118892]
Length = 1079
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 222/773 (28%), Positives = 360/773 (46%), Gaps = 90/773 (11%)
Query: 8 GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVL 63
GS I+ + A + + YIY+EA K+A + +A G+ NIY K+ L+ ++EM D+L
Sbjct: 262 GSRNPIKIISAFERGGTMAGYIYVEARKQADIIDALDGMSNIYVRSKMTLISVKEMPDLL 321
Query: 64 AVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI------DLQALAN 117
V+ K+ +L+ WVR+K G Y+GDLA++ +V+ VTV+L+PR+ D A A
Sbjct: 322 RVK-KSEELTPGGWVRIKRGRYQGDLAQLEEVETNGLNVTVRLVPRLEYGLNEDSNAPAL 380
Query: 118 KLEGREVAKKKPFV--PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLY 175
+ + + + PP R + EA++ H + + G + +G + DGFL
Sbjct: 381 DPKRKRIGGGSSAIARPPQRLFSEAEAKKRHSKYLSATSSLGGKSWSYLGDT-YVDGFLI 439
Query: 176 KTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANR-KKGHFMKGDAVIV 232
K + ++ + +N+ P DE+ KF ++G S D+ASL+ N ++ ++ GD V V
Sbjct: 440 KNMKVQHLITKNVNPQLDEVTKFARGADDGTSNLDLASLAATIKNTTEEDAYLVGDTVEV 499
Query: 233 IKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ 289
G+ + + G + V I+ E++G + + V +K L K F G+HVKV+ G++
Sbjct: 500 FAGEQRGVVGQTVATRGDIVTIKVTQGELQG--QHIDVPTKGLRKRFSEGDHVKVIGGSK 557
Query: 290 -AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELRDLVLLD 347
GMV++++ + IL+D T ++I VF+ D+ E+ ++ G+ K+G Y++ DLV +D
Sbjct: 558 YRDELGMVVRIKDDRVTILTDMTMQEITVFSKDLREADDI--GVDGKLGQYDVHDLVQID 615
Query: 348 NNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDV 405
+ G +++++ E+ +V+ +V + K+E + + DRN + + D
Sbjct: 616 QTTVGCVVKLDRESMRVID---QNGSTQIVLPSRVLGKIEHRRHAVTTDRNGSEIKCGDT 672
Query: 406 VRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDA 465
V+ V G + + G + HI+R LF + ++AG + ++ + V S + R+
Sbjct: 673 VKEVTG--EQRTGTILHIHRAFLFCTSKVVGDNAGIMVTRAINVTTVATSGSKLGRSAPD 730
Query: 466 YSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRV 525
S+ N P + Q G G PP G D LVG TV +R GP+KG G V
Sbjct: 731 LSKMN-----PAL-QKNGMNGSGMPPPR------TFGRDRLVGKTVHIRRGPFKGLLGIV 778
Query: 526 VDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRY-GMGSETPMHPSR--TPL 582
D RVEL S KVV V++ +S ++ D R+ G G P P T
Sbjct: 779 KDTTDIIARVELHSVSKVVPVEKENLSVKDPITGQPVDINRFGGRGGGAPRVPQSMATGR 838
Query: 583 HPYMTPMRDAGATPIH--DGMRTPM------RDRAWNPYTPMSPPRDNWE--------DG 626
G TPI D RTP R AWN P E DG
Sbjct: 839 AGPQDAAWQGGRTPIAMGDSSRTPAWRASSSRTPAWNAAVGSRTPAWKAEGSRTANPYDG 898
Query: 627 NPGSW----GTSPQYQPGS-PPSRA------------YEAPTPGSGWASTPGGNYSDAG- 668
N S+ G +P + G+ P A ++A GS PG +++G
Sbjct: 899 NRTSYGGFGGRTPAWTSGTKTPHDAGSGFSGGSSNSGFDAFMAGSRTPGHPGAMAANSGS 958
Query: 669 -TP------RDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPG-TPGGQPMTP 713
TP SS NA + TPGG P+ A + TPG TP
Sbjct: 959 RTPAWGHSGSSSSHLSTNAGRAFDAPTPGGDYTAPSPAPFGSAPTPGATAATP 1011
>gi|315040279|ref|XP_003169517.1| transcription elongation factor spt5 [Arthroderma gypseum CBS
118893]
gi|311346207|gb|EFR05410.1| transcription elongation factor spt5 [Arthroderma gypseum CBS
118893]
Length = 1082
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 190/643 (29%), Positives = 316/643 (49%), Gaps = 67/643 (10%)
Query: 8 GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVL 63
GS I+ + A + + YIY+EA K+A + +A G+ NIY + K+ L+ ++EM D+L
Sbjct: 264 GSRNPIKIISAFERGGTMAGYIYVEARKQADIIDALDGMSNIYVRSKLTLISVKEMPDLL 323
Query: 64 AVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID--LQALANK--- 118
V+ K+ +L+ WVR+K G Y+GDLA++ +V+ VTV+L+PR++ L +N
Sbjct: 324 RVK-KSEELTPGGWVRIKRGRYQGDLAQLEEVETNGLNVTVRLVPRLEYGLNEDSNAPAM 382
Query: 119 ---------LEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF 169
G VA+ PP R + EA++ H + + G + +G +
Sbjct: 383 DPKRKRIGGAGGSAVAR-----PPQRLFSEAEAKKRHSKYLSATSSLGGKSWSYLGDT-Y 436
Query: 170 KDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANR-KKGHFMK 226
DGFL K + ++ + +N+ P DE+ KF ++G S D+ASL+ N ++ ++
Sbjct: 437 VDGFLIKNMKVQHLITKNVNPQLDEVTKFARGADDGTSNLDLASLAATIKNTTEEDAYLV 496
Query: 227 GDAVIVIKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVK 283
GD V V G+ + + G + V I+ E++G + + V +K L K F G+HVK
Sbjct: 497 GDTVEVFTGEQRGVVGQTVATRGDIVTIKVTEGELQG--QHIDVPTKGLRKRFSEGDHVK 554
Query: 284 VVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELR 341
V+ G++ GMV++++ + IL+D ++I VF+ D+ E+ ++ G+ K+G Y++
Sbjct: 555 VIGGSKYRDELGMVVRIKDDRVTILTDMAMQEITVFSKDLREADDI--GVDGKLGQYDVH 612
Query: 342 DLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNT 399
DLV +D + G +++++ E+ +VL +V + K+E++ + DRN +
Sbjct: 613 DLVQIDQTTVGCVVKLDRESMRVLD---QNGSTQIVLPSRVLGKIEQRRHAVTTDRNGSE 669
Query: 400 VAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANG 459
+ D V+ V G + + G + HI+R LF + ++AG + ++ + V S +
Sbjct: 670 IKCGDTVKEVTG--EQRTGTILHIHRAFLFCTSKVVGDNAGIMVTRAINVTTVATSGSKL 727
Query: 460 DRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYK 519
R+ S+ N P + Q G G PP G D LVG TV +R GP+K
Sbjct: 728 GRSAPDLSKMN-----PAL-QKNGMNGSGMPPPR------TFGRDRLVGKTVHIRKGPFK 775
Query: 520 GYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRY-GMGSETPMHPS 578
G G V D RVEL S KVV V++ +S ++ D R+ G G P P
Sbjct: 776 GLLGIVKDTTDIIARVELHSVSKVVPVEKENLSVKDPITGQPVDINRFGGRGGGAPRVPQ 835
Query: 579 R--TPLHPYMTPMRDAGATPIH--DGMRTPM------RDRAWN 611
T G TPI D RTP R AWN
Sbjct: 836 SMATGRAGPQDAAWQGGRTPISTGDSSRTPAWRASSSRTPAWN 878
>gi|358366178|dbj|GAA82799.1| transcription initiation protein Spt5 [Aspergillus kawachii IFO
4308]
Length = 1050
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 229/782 (29%), Positives = 369/782 (47%), Gaps = 101/782 (12%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I++ GS I+ + A + + YIY+EA ++A V +A + + N+Y + K++L
Sbjct: 238 IQKRIEERPPGSRNPIKIMSAFERGGAMAGYIYVEARRQADVMDALQDMTNVYPRTKMIL 297
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP+REM D+L V+ K+ +L WVR+K G Y+GDLA++ +V+ VTV+LIPR+D
Sbjct: 298 VPVREMPDLLRVQ-KSEELMPGGWVRIKRGKYQGDLAQIEEVETNGLAVTVRLIPRLDYG 356
Query: 114 ALANKLEGREVA---KKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENI 164
N+ G +A +K+P + PP R + EA++ H + + G + N
Sbjct: 357 --MNEDIGAPIADPKRKRPGMNPAVARPPQRAFSEAEAKKKHAKYLSATSGLGGKSW-NY 413
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKK 221
G + DGFL K + ++ + +N+ P +E+ F E+G S D+ASL+ TL + +
Sbjct: 414 LGETYVDGFLIKDLKVQHLITKNVNPRLEEVTMFARGSEDGTSNLDLASLAETLKNSAAE 473
Query: 222 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + L G + V + L +T+ K L K F G+
Sbjct: 474 DSYLPGDPVEVFRGEQQGLIGRTSSTRGDIVTLLVTEGDLAGQTIDAPVKSLRKRFREGD 533
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDY 338
HVKV+ G++ GMV++V+ + +LSD + ++I VF+ D+ S+E TG+ K+G +
Sbjct: 534 HVKVIGGSRYQDELGMVVQVKDDTVTLLSDMSMQEITVFSKDLRLSAE--TGVDGKLGMF 591
Query: 339 ELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKL--EKKSNVQDRN 396
++ DLV LD + I++V+ E+ +VL + + ++ K+ K + DRN
Sbjct: 592 DVHDLVQLDAATVACIVKVDRESLRVLD---QNGSIRTILPTQVANKITPRKDAVATDRN 648
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+ D VR V G + + G + HI+R LF+H++ E++G + ++++ V V S
Sbjct: 649 GAEIRHGDTVREVYG--EQRNGVILHIHRSFLFLHNKAQAENSGIVVVRTTNVVTV--SA 704
Query: 457 ANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRG---------GHDALV 507
G G ++ N PA RN G G D ++
Sbjct: 705 KGGRSTGPDLTKMN--------------------PALMRNGMPGGMMGPPQKSFGRDRMI 744
Query: 508 GTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRY 567
G TV VR GP+KG G V D RVEL S+ K++++ + ++ V+ D R
Sbjct: 745 GKTVMVRKGPFKGLVGIVKDSTDVQARVELHSKNKLISIPKDILVVKDPVTGQTIDMGRG 804
Query: 568 GMGSETPMHPSRTPLHPYM---TPM--RDAGATPIHDG---MRTPM-------RDRAW-- 610
G P S P + TPM D+ TP G RTP R AW
Sbjct: 805 RGGPRVPHGGSGGPPSAWQGGRTPMGAGDSSRTPAWGGPSSSRTPAWAGMSGSRTPAWKQ 864
Query: 611 ------NPYTPMSPPRDNWEDGNPGSWGT---SPQYQPGSPPSRAYEAPTPGSGWASTPG 661
NPY + P +W +P G+ A+ A + W S+
Sbjct: 865 DGSRTSNPYDGSQTAYGGFGSRTP-AWNAGARTPYVGSGNSDFDAFAAGSRTPAWGSSNA 923
Query: 662 GNYSDA-GTPRDSSSTY---VNAPSP--YLPSTPG--GQPMTPNSASYLPGTPGGQPMTP 713
GN + A G S+ T +AP+P Y TPG G TP ++ PG TP
Sbjct: 924 GNRTPAWGGATASNGTKDRGYDAPTPGGYSAPTPGAYGSAPTPGVSAPTPGAWADSAPTP 983
Query: 714 GT 715
G
Sbjct: 984 GA 985
>gi|302653362|ref|XP_003018508.1| hypothetical protein TRV_07454 [Trichophyton verrucosum HKI 0517]
gi|291182159|gb|EFE37863.1| hypothetical protein TRV_07454 [Trichophyton verrucosum HKI 0517]
Length = 1099
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 169/567 (29%), Positives = 292/567 (51%), Gaps = 45/567 (7%)
Query: 8 GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVL 63
GS I+ + A + + YIY+EA K+A + +A G+ NIY K+ L+ ++EM D+L
Sbjct: 262 GSRNPIKIISAFERGGTMAGYIYVEARKQADIIDALDGMSNIYVRSKMTLISVKEMPDLL 321
Query: 64 AVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI------DLQALAN 117
V+ K+ +L+ WVR+K G Y+GDLA++ +V+ VTV+L+PR+ D A A
Sbjct: 322 RVK-KSEELTPGGWVRIKRGRYQGDLAQLEEVETNGLNVTVRLVPRLEYGLNEDSNAPAL 380
Query: 118 KLEGREVAKKKPFV--PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLY 175
+ + + + PP R + EA++ H + + G + +G + DGFL
Sbjct: 381 DPKRKRIGGGSSAIARPPQRLFSEAEAKKRHSKYLSATSSLGGKSWSYLGDT-YVDGFLI 439
Query: 176 KTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANR-KKGHFMKGDAVIV 232
K + ++ + +N+ P DE+ KF ++G S D+ASL+ N ++ ++ GD V V
Sbjct: 440 KNMKVQHLITKNVNPQLDEVTKFARGADDGTSNLDLASLAATIKNTTEEDAYLVGDTVEV 499
Query: 233 IKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ 289
G+ + + G + V I+ E++G + + V +K L K F G+HVKV+ G++
Sbjct: 500 FAGEQRGVVGQTVATRGDIVTIKVTQGELQG--QHIDVPTKGLRKRFSEGDHVKVIGGSK 557
Query: 290 -AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELRDLVLLD 347
GMV++++ + IL+D T ++I VF+ D+ E+ ++ G+ K+G Y++ DLV +D
Sbjct: 558 YRDELGMVVRIKDDRVTILTDMTMQEITVFSKDLREADDI--GVDGKLGQYDVHDLVQID 615
Query: 348 NNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDV 405
+ G +++++ E+ +V+ +V + K+E + + DRN + + D
Sbjct: 616 QTTVGCVVKLDRESMRVID---QNGSTQIVLPSRVLGKIEHRRHAVTTDRNGSEIKCGDT 672
Query: 406 VRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDA 465
V+ V G + + G + HI+R LF + ++AG + ++ + V S + R+
Sbjct: 673 VKEVTG--EQRTGTILHIHRAFLFCTSKVVGDNAGIMVTRAINVTTVATSGSKLGRSAPD 730
Query: 466 YSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRV 525
S+ N P + Q G G PP G D LVG TV +R GP+KG G V
Sbjct: 731 LSKMN-----PAL-QKNGMNGSGMPPPR------TFGRDRLVGKTVHIRRGPFKGLLGIV 778
Query: 526 VDVKGQSVRVELESQMKVVTVDRSMIS 552
D RVEL S KVV V++ +S
Sbjct: 779 KDTTDIIARVELHSVSKVVPVEKENLS 805
>gi|259487039|tpe|CBF85391.1| TPA: transcription initiation protein spt5 (AFU_orthologue;
AFUA_4G08500) [Aspergillus nidulans FGSC A4]
Length = 920
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 227/777 (29%), Positives = 358/777 (46%), Gaps = 123/777 (15%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I+ GS I+ + A + + YIY+EA ++A V +A + + N+Y + K++L
Sbjct: 123 IQKRIEDRPPGSRNPIKIISAFERGGAMSGYIYVEARRQADVMDALQDMSNVYPRTKMIL 182
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP++EM D+L V+ K+ +L+ WVR+K G Y DLA++ +V+ VTV+L+PR+D
Sbjct: 183 VPVKEMPDLLRVQ-KSEELNPGGWVRIKRGKYMNDLAQIEEVETNGLAVTVRLVPRLDYG 241
Query: 114 ALANKLEGREV---AKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENI 164
N+ G + +K+P PP R + EA++ H + + + N
Sbjct: 242 M--NEDSGAPIMDPKRKRPGANPAVARPPQRLFSEAEAKKKHSKYLTATAGLGAKSW-NY 298
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKK 221
G + DGFL K + ++ + +N+ P +E+ F ENG S D+ASL+ TL + +
Sbjct: 299 LGETYIDGFLIKDMKVQHLITKNVNPRLEEVTMFARDSENGTSNLDLASLAETLKNSTAE 358
Query: 222 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHI---RPEMKGLPKTLAVNSKELCKYFEP 278
++ GD V V KG+ + L G + V I E+ G +T+ K L K F
Sbjct: 359 ESYLPGDPVEVFKGEQQGLVGRTSSTRGDIVTILVTEGELAG--QTIEAPVKTLRKRFRE 416
Query: 279 GNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIG 336
G+HVKV+ G++ GMV++V + +LSD + ++I VF+ D+ S+E TG+ K+G
Sbjct: 417 GDHVKVIGGSRYQDELGMVVQVRDDTVTLLSDMSMQEITVFSKDLRLSAE--TGVDGKLG 474
Query: 337 DYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QD 394
+++ DLV LD + I++V+ E+ +VL + + ++ K+ + + D
Sbjct: 475 MFDVHDLVQLDAATVACIVKVDRESLRVLD---QNGSIRTILPSQVTNKITPRRDAVATD 531
Query: 395 RNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
RN + D VR V G + + G + HI+R LFIH++ E+AG + ++++ V V
Sbjct: 532 RNGAEIRHGDTVREVYG--EQRSGVILHIHRSFLFIHNKAQAENAGIVVVRTTNVVTV-- 587
Query: 455 SRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAG--GRNRGGRGGHDALVGTTVK 512
S G G S+ N R G P G G D L+G TV
Sbjct: 588 SAKGGRPTGPDLSKMNPA------------LMRNGAPGGMMAPPPSKTFGRDRLLGKTVL 635
Query: 513 VRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPY----------R 562
V+ GP+KG G V D RVEL S+ K+VT+ + ++ VV P R
Sbjct: 636 VKKGPFKGLLGIVKDTTDVQARVELHSKNKLVTIPKELL----VVKDPVTGQTIDIGRGR 691
Query: 563 DTPRY----------GMGSETPM---HPSRTPLHPYMTPMRDAGATPIHDGMRTPM---- 605
PR G TPM SRTP R + G RTP
Sbjct: 692 GGPRVPQNSAAPSSGWQGGRTPMAAADSSRTPAWGAAMSSRTPAWSGAGLGSRTPAWKAD 751
Query: 606 -----------RDRAWN-----PYTPMSPPRDNWEDGN---PGS----WGT-----SPQY 637
R AWN PY D + GS WG +P +
Sbjct: 752 GSRTAYGGAGSRTPAWNAGARTPYGGGFGSGSGNSDFDAFAAGSRTPAWGAASGSRTPAW 811
Query: 638 QPGSPPS-----RAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTP 689
+ + +AY+APTPG+ +++ G Y A TP S+ T P + S P
Sbjct: 812 SASANTTSRNDNKAYDAPTPGATYSAPTPGAYGGAPTPGLSAPT----PGAWADSAP 864
>gi|67522483|ref|XP_659302.1| hypothetical protein AN1698.2 [Aspergillus nidulans FGSC A4]
gi|74597994|sp|Q5BCN2.1|SPT5_EMENI RecName: Full=Transcription elongation factor spt5; AltName:
Full=Chromatin elongation factor spt5
gi|40745662|gb|EAA64818.1| hypothetical protein AN1698.2 [Aspergillus nidulans FGSC A4]
Length = 1016
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 227/777 (29%), Positives = 358/777 (46%), Gaps = 123/777 (15%)
Query: 1 MQKCIDK---GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVML 53
+QK I+ GS I+ + A + + YIY+EA ++A V +A + + N+Y + K++L
Sbjct: 219 IQKRIEDRPPGSRNPIKIISAFERGGAMSGYIYVEARRQADVMDALQDMSNVYPRTKMIL 278
Query: 54 VPIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQ 113
VP++EM D+L V+ K+ +L+ WVR+K G Y DLA++ +V+ VTV+L+PR+D
Sbjct: 279 VPVKEMPDLLRVQ-KSEELNPGGWVRIKRGKYMNDLAQIEEVETNGLAVTVRLVPRLDYG 337
Query: 114 ALANKLEGREV---AKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENI 164
N+ G + +K+P PP R + EA++ H + + + N
Sbjct: 338 M--NEDSGAPIMDPKRKRPGANPAVARPPQRLFSEAEAKKKHSKYLTATAGLGAKSW-NY 394
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLS-TLFANRKK 221
G + DGFL K + ++ + +N+ P +E+ F ENG S D+ASL+ TL + +
Sbjct: 395 LGETYIDGFLIKDMKVQHLITKNVNPRLEEVTMFARDSENGTSNLDLASLAETLKNSTAE 454
Query: 222 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHI---RPEMKGLPKTLAVNSKELCKYFEP 278
++ GD V V KG+ + L G + V I E+ G +T+ K L K F
Sbjct: 455 ESYLPGDPVEVFKGEQQGLVGRTSSTRGDIVTILVTEGELAG--QTIEAPVKTLRKRFRE 512
Query: 279 GNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIG 336
G+HVKV+ G++ GMV++V + +LSD + ++I VF+ D+ S+E TG+ K+G
Sbjct: 513 GDHVKVIGGSRYQDELGMVVQVRDDTVTLLSDMSMQEITVFSKDLRLSAE--TGVDGKLG 570
Query: 337 DYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QD 394
+++ DLV LD + I++V+ E+ +VL + + ++ K+ + + D
Sbjct: 571 MFDVHDLVQLDAATVACIVKVDRESLRVLD---QNGSIRTILPSQVTNKITPRRDAVATD 627
Query: 395 RNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
RN + D VR V G + + G + HI+R LFIH++ E+AG + ++++ V V
Sbjct: 628 RNGAEIRHGDTVREVYG--EQRSGVILHIHRSFLFIHNKAQAENAGIVVVRTTNVVTV-- 683
Query: 455 SRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAG--GRNRGGRGGHDALVGTTVK 512
S G G S+ N R G P G G D L+G TV
Sbjct: 684 SAKGGRPTGPDLSKMNPA------------LMRNGAPGGMMAPPPSKTFGRDRLLGKTVL 731
Query: 513 VRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPY----------R 562
V+ GP+KG G V D RVEL S+ K+VT+ + ++ VV P R
Sbjct: 732 VKKGPFKGLLGIVKDTTDVQARVELHSKNKLVTIPKELL----VVKDPVTGQTIDIGRGR 787
Query: 563 DTPRY----------GMGSETPM---HPSRTPLHPYMTPMRDAGATPIHDGMRTPM---- 605
PR G TPM SRTP R + G RTP
Sbjct: 788 GGPRVPQNSAAPSSGWQGGRTPMAAADSSRTPAWGAAMSSRTPAWSGAGLGSRTPAWKAD 847
Query: 606 -----------RDRAWN-----PYTPMSPPRDNWEDGN---PGS----WGT-----SPQY 637
R AWN PY D + GS WG +P +
Sbjct: 848 GSRTAYGGAGSRTPAWNAGARTPYGGGFGSGSGNSDFDAFAAGSRTPAWGAASGSRTPAW 907
Query: 638 QPGSPPS-----RAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTP 689
+ + +AY+APTPG+ +++ G Y A TP S+ T P + S P
Sbjct: 908 SASANTTSRNDNKAYDAPTPGATYSAPTPGAYGGAPTPGLSAPT----PGAWADSAP 960
>gi|150863731|ref|XP_001382298.2| hypothetical protein PICST_70551 [Scheffersomyces stipitis CBS
6054]
gi|149384987|gb|ABN64269.2| transcription initiation protein SPT5 [Scheffersomyces stipitis CBS
6054]
Length = 974
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 194/689 (28%), Positives = 326/689 (47%), Gaps = 83/689 (12%)
Query: 2 QKCIDKGSE-LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
++ +D+ + L I +V D K YIYIEA + + +A G+ NIY + +LVP++E
Sbjct: 248 KRTLDRSNAPLDILTVFQRDAFKGYIYIEAKRPDAIDKALVGMVNIYVRDKLLVPVKEYP 307
Query: 61 DVL-AVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN-K 118
D+L V+S ++L +VR+ G YK DLA V ++ V KL+PR+D
Sbjct: 308 DLLKQVKSSDVELVPGIYVRITRGKYKNDLAIVDNLSENGLDVRCKLVPRLDYGKFDEFD 367
Query: 119 LEGREVAKKKPFVPPPRFMNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGFLYKT 177
+GR + K P PR + EAR+ ++ R P + Y G + +GFLYK
Sbjct: 368 KDGRRIRSKAR--PLPRLFSEQEARQYDREFLQPGRGPRSYVYR----GDEYIEGFLYKD 421
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANRK----KGHFMKGDAVI 231
++ I +++ PT +EL++F+T G N E D+A+++ N+K F GD V
Sbjct: 422 FKLQFIQTKDVHPTLEELDRFQT-GNNEEEGFDLAAIAASLKNKKGEGKSTAFQPGDKVE 480
Query: 232 VIKGDLKNLKGWVEKVDEENVHIRPEMKGLPK----TLAVNSKELCKYFEPGNHVKVVSG 287
+ +G+ G V + + I G PK L V + +L K F G+HV++V G
Sbjct: 481 IRRGEQAKTVGVVVEASLNEITISVTDSGDPKFVNQKLTVPASDLRKIFNEGDHVRIVEG 540
Query: 288 TQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGD-YELRDLVLL 346
TG+V+K++ ++++SD T+ED+RVFA+ +V++++ ++ + I Y+++DLV L
Sbjct: 541 KHFDETGLVIKIDGDSVVLVSDQTREDVRVFANYLVKATDASSNMDTINSKYDIKDLVEL 600
Query: 347 DNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ---DRNKNTVAVK 403
+ S GVI++ E F+VL + VK I KL+ Q DRN T+ +
Sbjct: 601 NAASVGVIVKAEKNIFEVL---TSDGRLLSVKPSGISSKLKMSRREQIATDRNGFTIKIG 657
Query: 404 DVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAK--SSSCVVVGGSRANGDR 461
D V+ V G K ++G + HIY+ LFI +E+ G + S + S + +
Sbjct: 658 DTVKEVLGDKK-REGAILHIYKNSLFIKSNEIVENLGIFVTNRMNVSTISTKDSMVSKNL 716
Query: 462 NGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGY 521
D S +L+ P P AGG + GG + L+ V V G YKG
Sbjct: 717 GPDLTSMNPNLKLP-------------NPSAGGF-KPRAGGREKLLYKDVAVTSGSYKGL 762
Query: 522 RGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVV---STPYR---------------- 562
+G+V++ R+EL ++ K + V+++ + NV++ + PY
Sbjct: 763 KGKVIETDDVYARIELHTKSKKIKVNKNNL--NVLIRGEAIPYLRFIGAAPSESREFNKP 820
Query: 563 DTPRYGMGSETPMHPSRTP-------------LHPYMTPMRDAGATPIHDGMRTPMRDRA 609
+ P + G + + + TP + + G TP + G + A
Sbjct: 821 NAPAFTSGERSSWNGNATPGVGANSAWGGASSSWGGASSAWNGGKTPAYSGGNSTWGGAA 880
Query: 610 --WN-PYTPMSPPRDNW-EDGNPGSWGTS 634
WN TP + W +G+ +WG+S
Sbjct: 881 STWNGGKTPNAGGTSEWGANGSNSTWGSS 909
>gi|336466991|gb|EGO55155.1| hypothetical protein NEUTE1DRAFT_85268 [Neurospora tetrasperma FGSC
2508]
gi|350288394|gb|EGZ69630.1| transcription elongation factor Spt5 [Neurospora tetrasperma FGSC
2509]
Length = 989
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 236/800 (29%), Positives = 357/800 (44%), Gaps = 139/800 (17%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQKVM-LVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA ++ + A G+ N+Y + M LV I++M D+L V K +L WVR+
Sbjct: 219 MKGYIYVEAQRQNDILVALDGILNVYPRSNMHLVEIKDMPDLLRV-IKTPNLEPGAWVRL 277
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN---KLEG-REVAKKKPFVPPPR 135
K + GDLA+V+DV V+ IPR+D + + +G R+ PP R
Sbjct: 278 KKPAKHVGDLAQVIDVTENGLEARVRFIPRLDYGVRDDPVFQADGKRKRPGVPGPRPPQR 337
Query: 136 FMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDEL 195
+ EAR+ H R + +P T + N G F++GF K + ++ + +++ PT +E+
Sbjct: 338 LFSEAEARKRHPRY-LQGNPQTNSW--NYNGDDFENGFQVKDIKIQQLEVKDVNPTLEEV 394
Query: 196 EKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
KF + E+G ++ A +TL + K ++ GD + V +G+ + + G V + V
Sbjct: 395 TKFASGAEDGTENLDLKALAATLKDSAKSVAYVPGDIIEVYEGEQQGVIGKATNVQGDIV 454
Query: 253 HIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQA-GATGMVLKVEQHVLIILSDT 310
++ L +T+ V +K L K F G+HVKV+ G++ GMV+K+ + +L+D
Sbjct: 455 TLQVTEGDLAGRTIDVPNKGLRKRFRIGDHVKVIGGSRFRDEVGMVVKIVDDRVTLLTDQ 514
Query: 311 TKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPD 370
T +I VF+ D+ E+S++ G +G Y L DLV LD + G I++V+ E+ VL D
Sbjct: 515 TNTEITVFSKDLREASDIG-GQGSLGQYSLLDLVQLDATTVGCIVKVDRESVVVLDQNGD 573
Query: 371 RPEVALVKLREIKCKLEKK--SNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL 428
+V + +I KL K+ + DRN + + + DVVR G + +QG + HI+R +
Sbjct: 574 TKQV---QPSQITNKLPKRKFAVAADRNGSEIRLDDVVREYGG--QQRQGKIIHIHRSYI 628
Query: 429 FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN----GDAYSRFNSLRTPPRIPQSPGR 484
F+H E+AG +++S V A G RN G S N P + ++P
Sbjct: 629 FLHTTTTNENAGVFVTRANSVTTVA---AKGGRNTATAGPDLSAMN-----PALKRNPAA 680
Query: 485 YSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVV 544
+ P G D + TV +R G YKG G V D RVEL S+ K++
Sbjct: 681 SGKQMPAPR------TFGPDRAINQTVVIRRGGYKGLLGIVKDTTDTHARVELHSRGKII 734
Query: 545 TVDRSMIS--DNVV---------------------------VSTPYRD-----TPRYGMG 570
T+ ++ +S D V TP TP +G
Sbjct: 735 TIPKADLSFKDKVTGKTIDINQRGGSRGGFGGGGRGGGEFGSRTPMASGGSDRTPAWGSS 794
Query: 571 SETPMHP--------SRTP--------LHPY---MTPMRDAGA-------TPI-HDGMRT 603
T P SRTP ++PY TP A A TP H G RT
Sbjct: 795 RSTARTPAWNRDAGGSRTPAWNDGSRTVNPYDGSRTPYGGATAYGGIGSRTPAWHSGSRT 854
Query: 604 PMRDR-AWNPYTP-MSPPRDNWEDGNPG-------------SWGTSPQYQPGSPPSRAYE 648
P D TP S D+W PG +WG +P G S AY+
Sbjct: 855 PAPDSFGHGSKTPAWSAGSDSWGSKTPGYGASAPTPGASGDTWGYTPGASGGGNSSSAYD 914
Query: 649 APTPGSGW-ASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPG 707
APTPG G A TPG +NAP+P G P A+ TPG
Sbjct: 915 APTPGGGLSAPTPG--------------AALNAPTP-------GAYSAPTPAAVSAPTPG 953
Query: 708 GQPMTPGTGGLDAMSPVIGA 727
G+GG +P GA
Sbjct: 954 AWQGGWGSGGDAVSAPTPGA 973
>gi|164424652|ref|XP_959276.2| hypothetical protein NCU06929 [Neurospora crassa OR74A]
gi|161789040|sp|Q7S3C4.2|SPT5_NEUCR RecName: Full=Transcription elongation factor spt-5; AltName:
Full=Chromatin elongation factor spt-5
gi|157070605|gb|EAA30040.2| hypothetical protein NCU06929 [Neurospora crassa OR74A]
Length = 1052
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 238/798 (29%), Positives = 358/798 (44%), Gaps = 137/798 (17%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQKVM-LVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA ++ + A G+ N+Y + M LV I++M D+L V K +L WVR+
Sbjct: 285 MKGYIYVEAQRQNDILVALDGILNVYPRSNMHLVEIKDMPDLLRV-IKTPNLEPGAWVRL 343
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN---KLEG-REVAKKKPFVPPPR 135
K + GDLA+V+DV V+ IPR+D + + +G R+ PP R
Sbjct: 344 KKPAKHAGDLAQVIDVTENGLEARVRFIPRLDYGVRDDPVFQADGKRKRPGVPGPRPPQR 403
Query: 136 FMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDEL 195
+ EAR+ H R + +P T + N G F++GF K + ++ + +N+ PT +E+
Sbjct: 404 LFSEAEARKRHPRY-LQGNPQTNSW--NYNGDDFENGFQVKDIKIQQLEVKNVNPTLEEV 460
Query: 196 EKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
KF + E+G ++ A +TL + K ++ GD + V +G+ + + G V + V
Sbjct: 461 TKFASGAEDGTENLDLKALAATLKDSAKSVAYVPGDIIEVYEGEQQGVIGKATNVQGDIV 520
Query: 253 HIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDT 310
++ L +T+ V +K L K F G+HVKV+ G++ GMV+K+ + +L+D
Sbjct: 521 TLQVTEGDLAGRTIDVPNKGLRKRFRIGDHVKVIGGSRFRDEVGMVVKIVDDRVTLLTDQ 580
Query: 311 TKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPD 370
T +I VF+ D+ E+S++ G +G Y L DLV LD + G I++V+ E+ VL D
Sbjct: 581 TNTEITVFSKDLREASDIG-GQGSLGQYSLLDLVQLDATTVGCIVKVDRESVVVLDQNGD 639
Query: 371 RPEVALVKLREIKCKLEKK--SNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL 428
+V + +I KL K+ + DRN + + + DVVR G + +QG + HI+R +
Sbjct: 640 TKQV---QPSQITNKLPKRKFAVAADRNGSEIRLDDVVREYGG--QQRQGKIIHIHRSYI 694
Query: 429 FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN----GDAYSRFNSLRTPPRIPQSPGR 484
F+H E+AG +++S V A G RN G S N P + ++P
Sbjct: 695 FLHTTTTNENAGVFVTRANSVTTVA---AKGGRNTATAGPDLSAMN-----PALKRNPTA 746
Query: 485 YSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVV 544
+ P G D + TV +R G YKG G V D RVEL S+ K++
Sbjct: 747 SGKQMPAPR------TFGPDRAINQTVVIRRGGYKGLLGIVKDTTDTHARVELHSRGKII 800
Query: 545 TVDRSMIS--DNVV---------------------------VSTPYRD-----TPRYGMG 570
T+ ++ +S D V TP TP +G
Sbjct: 801 TIPKADLSFKDKVTGKTIDINQRGGSRGGFGGGGRGGGEFGSRTPMASGGSDRTPAWGSS 860
Query: 571 -SETPMHP-----SRTP--------LHPY---MTPMRDAGA-------TPI-HDGMRTPM 605
S TP SRTP ++PY TP A A TP H G RTP
Sbjct: 861 RSRTPAWNRDAGGSRTPAWNDGSRTVNPYDGSRTPYGGATAYGGIGSRTPAWHSGSRTPA 920
Query: 606 RDR-AWNPYTP-MSPPRDNWEDGNPG-------------SWGTSPQYQPGSPPSRAYEAP 650
D TP S D+W PG +WG +P G S AY+AP
Sbjct: 921 PDSFGHGSKTPAWSAGSDSWGSKTPGYGASAPTPGASGDAWGYTPGASGGGNSSSAYDAP 980
Query: 651 TPGSGW-ASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQ 709
TPG G A TPG +NAP+P G P A+ TPG
Sbjct: 981 TPGGGLSAPTPG--------------AALNAPTP-------GAYSAPTPAAVSAPTPGAW 1019
Query: 710 PMTPGTGGLDAMSPVIGA 727
G+GG +P GA
Sbjct: 1020 QGGWGSGGDAVSAPTPGA 1037
>gi|258578061|ref|XP_002543212.1| Spt5p protein [Uncinocarpus reesii 1704]
gi|237903478|gb|EEP77879.1| Spt5p protein [Uncinocarpus reesii 1704]
Length = 1052
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 202/681 (29%), Positives = 326/681 (47%), Gaps = 69/681 (10%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+ YIY+EA K+A V +A + L N++ K+ L+ ++EM D+L V+ K+ +L WVR+
Sbjct: 274 MSGYIYVEARKQADVMDALENLSNVFIRSKLTLISVKEMPDLLRVQ-KSEELQPGGWVRI 332
Query: 81 KIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN-KLEGREVAKKKP-------FVP 132
K G Y+GDLA++ +V+ VTV+L+PR+D + + + +K+P P
Sbjct: 333 KRGKYQGDLAQIEEVETNGLEVTVRLVPRLDYGLNDDVHIPNGDSKRKRPGGANAAVARP 392
Query: 133 PPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTF 192
P R + EA++ H R + G + +G + DGFL K + ++ + +N+ P
Sbjct: 393 PQRLFSEAEAKKRHGRYLSAAAGLGGKSWTYLGDT-YIDGFLIKDMKIQHLITKNVNPQL 451
Query: 193 DELEKFRTPGENGES--DIASLSTLFANRK-KGHFMKGDAVIVIKGDLKNLKGWVEKVDE 249
E+ KF ++G + D+ASL+ N + ++ GD V V G+ + + G V
Sbjct: 452 GEVTKFARGADDGTANLDLASLAASLKNTTGEDSYVPGDTVEVFSGEQRGVVGKVLSGRA 511
Query: 250 ENVHI---RPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLI 305
+ V I E++G + L V K L K F G+HVKV+ G++ GMV++++ +
Sbjct: 512 DIVSITVTEGELEG--QRLEVPVKGLRKRFSEGDHVKVIGGSKYRDELGMVVRIKDDRVT 569
Query: 306 ILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELRDLVLLDNNSFGVIIRVESEAFQV 364
+L+D + ++I VF+ D+ E+ + G+ K+G Y++ DLV LD + G II+++ E+ +V
Sbjct: 570 LLTDMSMQEITVFSKDLREADDA--GVDGKLGQYDVHDLVQLDQTTVGCIIKLDRESMKV 627
Query: 365 LKGVPDRPEVALVKLREI-KCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
+ L+ R I K +L + + DRN + D VR V G + + G + H+
Sbjct: 628 IDQHGSIRN--LLPSRVIGKIELRRNAVTTDRNGAEIKYGDTVREVTG--EQRLGVILHV 683
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R LF+ + ++AG I +++S+ V V S + G S+ N P + Q G
Sbjct: 684 HRAFLFMQSKVVGDNAGIIVSRASNVVTVATSGGSLAPRGPDLSKMN-----PAL-QKNG 737
Query: 484 RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKV 543
G PP G D VG TV +R GPYKG G + D RVEL S KV
Sbjct: 738 LNGSGMPPPRTV------GRDRTVGKTVTIRKGPYKGLLGIIKDTTDDIARVELHSVSKV 791
Query: 544 VTVDRSMISDNVVVSTPYRDTP------RYGMGSETPMHPSRTPLHPYMTPMRDAGATPI 597
V V++ +N+ + P P G G P + P G TP+
Sbjct: 792 VPVEK----ENLTIKDPITGQPIDLRQFGRGAGRGGSRIPQSSAAPPRSQSSWQGGRTPM 847
Query: 598 --HDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPG----SWGTSPQYQPGSPPSRAYEAPT 651
D RTP AW + +P W G SW T GS AY+A
Sbjct: 848 AASDSSRTP----AWRASSSRTPA---WNAAASGARTPSWKTD-----GSRTVNAYDAGY 895
Query: 652 PGSGWASTPGGNYSDAGTPRD 672
+ + TP + + TPRD
Sbjct: 896 KTTLGSRTPAW-AAGSKTPRD 915
>gi|260943478|ref|XP_002616037.1| hypothetical protein CLUG_03278 [Clavispora lusitaniae ATCC 42720]
gi|238849686|gb|EEQ39150.1| hypothetical protein CLUG_03278 [Clavispora lusitaniae ATCC 42720]
Length = 1026
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 178/586 (30%), Positives = 285/586 (48%), Gaps = 69/586 (11%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVE 66
G L++ SV D K YIY+EA K ++ A G+ NIY+++ ++VP+ E D+L V+
Sbjct: 259 GKPLEVLSVFQRDAFKGYIYMEAKKPEAIERALNGMVNIYAKQRIIVPVSEYPDLLKQVK 318
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-EGREVA 125
S +++ +VR+ G YKGDLA V ++ V K++PR+D + EG+ +
Sbjct: 319 SSDVEIVPGIYVRITRGKYKGDLAVVDNLSENGLEVRCKVVPRLDYGKNDDFTPEGKRIR 378
Query: 126 KKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFE--------NIGGMLFKDGFLYKT 177
K P PR + EAR GDY + G + +GFLYK
Sbjct: 379 SK--VRPVPRLFSEQEAR-----------MYDGDYLQPGRGPRSYIYRGDEYIEGFLYKD 425
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRK--KGH-------FMKGD 228
++ I +++ PT +EL++F+T N E D L+ + A+ K + H F GD
Sbjct: 426 FKLQFIQTKDVHPTLEELDRFQTG--NTEEDGMDLAAVAASLKSSRNHEGGRASAFQPGD 483
Query: 229 AVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPK----TLAVNSKELCKYFEPGNHVKV 284
V V +G+ G V V V +R P+ + V + +L K F PG+HVKV
Sbjct: 484 KVEVRRGEQAKTIGVVMGVSLNEVTMRVTESADPQFVGQEVTVTTSDLRKVFSPGDHVKV 543
Query: 285 VSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKI-GDYELRDL 343
V G A TG+V+K++ +++LSD +KED+RVFA+ ++++++ ++ G Y ++DL
Sbjct: 544 VEGKHADQTGLVIKIDGDSVVLLSDQSKEDVRVFANYLIKATDTSSSADMANGQYGIKDL 603
Query: 344 VLLDNNSFGVIIRVESEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNT 399
V L+ + GVI++ + F VL + V +P KLR + ++ DR+
Sbjct: 604 VQLNAQTVGVIVQADKGLFGVLTQDGRVVSVKPTGIAAKLRMTR----REQVATDRHGLP 659
Query: 400 VAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANG 459
+ V D VR E K+G + HI++ LFI E+ G + + + + +
Sbjct: 660 IRVGDTVR--ESGDAKKEGVIVHIHKNTLFIESHELQENLGLFVSSALNVSTIATKNSMV 717
Query: 460 DRN-GDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPY 518
R G SR N P I +P P G R GG D L+ V V G Y
Sbjct: 718 SRTLGPDLSRMN-----PNIKAAP-------VPTAGVTRA--GGRDKLLYKDVVVNNGNY 763
Query: 519 KGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVV---STPY 561
KG G+VV+ R+EL ++ K + V+++ +S V+V S PY
Sbjct: 764 KGLMGKVVETDDTDARIELHTKAKKIKVNKTKLS--VMVRGESVPY 807
>gi|167523304|ref|XP_001745989.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775790|gb|EDQ89413.1| predicted protein [Monosiga brevicollis MX1]
Length = 923
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 221/828 (26%), Positives = 349/828 (42%), Gaps = 180/828 (21%)
Query: 24 NYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVESKAIDLSRDTWVR 79
+YIYIEA + A VKEA G+ + Y QK LVP+ +M VLA++ + + + WVR
Sbjct: 248 SYIYIEAYRPAAVKEAITGIMALRYGQYDQK--LVPMDDMPRVLAIQKQTVTVKPGAWVR 305
Query: 80 MKIGNYKGDLAKVVDV--DNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVPPPRFM 137
+K G Y+ DLAKVV+V + R +VTV L+PR+DL A A A K+ F P
Sbjct: 306 LKRGVYRDDLAKVVEVTSNEKRTQVTVHLLPRLDLNADATTRNSTVRAPKRRFDP----- 360
Query: 138 NVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEK 197
DE R + +R DY +F G+L V + S+ +++ T DE+ +
Sbjct: 361 --DEVRAIRGDDAVQRASTVDDYTFEFERNIFIKGYLRHRVPLTSLQIEDVNATLDEIAE 418
Query: 198 FRTPGENGESDIASLSTLFANRK-KGHFMKGDAVIVIKGDLKNLKGWVEKVDEE-NVHIR 255
F G D A + + + K +F+ GD VI +G+LKN G +E + E+ V +R
Sbjct: 419 F-----EGTDDSAVAAAIEEDESSKTNFVVGDRVIAYRGNLKNAFGVIETIREDGTVVLR 473
Query: 256 PEMKGLPKT--LAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKE 313
E + L + V ++L K+F P +HVKV G G TG+VL+V + +L D T +
Sbjct: 474 VENQELRDLDRIPVPKEDLRKHFRPADHVKVQRGRYEGQTGLVLEVNDQRVTVLIDLTMK 533
Query: 314 DIRVFADDVVESSEVTTGITKIGDYELRDLV-LLDNNSFGVIIRVESEAFQVLKGVPDRP 372
I + D+ + TG+ G + L DLV + + GVII +E + F++L
Sbjct: 534 QIESLSRDLEICETIGTGLDAHGQFALFDLVQMTQAATVGVIIAIERDEFKILDQNGQEK 593
Query: 373 EVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHD 432
+ +++ I K + ++ D +N VA + R+V+GP KG+ G V++I+RG +F+ D
Sbjct: 594 TIKSQQVKPIGRKHQPQTF--DSQQNVVARDSMARVVDGPNKGRSGKVKYIHRGYVFLQD 651
Query: 433 RHHLEHAG-FICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPP 491
R EH G F+C GR+ +
Sbjct: 652 RGSTEHNGIFVCR--------------------------------------GRHLQ---- 669
Query: 492 AGGRNRGGRGGHDALVG----TTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVD 547
GH +V TTV+V L R R++ +K Q V+ ++ D
Sbjct: 670 ----------GHQGIVTDATETTVRVELHA----RNRIISLKTQHVK-----EIPAFRSD 710
Query: 548 RSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRD 607
+ D P + GS +H +RTP + TP+ TP + G TP +
Sbjct: 711 QGQF-----------DKPGWA-GS---IHGARTPFNSAQTPLYTGAETPRYTGAETPHGN 755
Query: 608 RAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDA 667
+ P PR +G + G +P P P +A TPG TPG
Sbjct: 756 Q--TPRMGSQTPRGAHTNG--PAQGMTPGLTPSLTPGFTPQAYTPG----FTPG------ 801
Query: 668 GTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
AP+P + STP
Sbjct: 802 -----------MAPTPGVASTP------------------------------------MV 814
Query: 728 DNEGPWFMPDILVRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPR 787
D + W I+V G + + DG V+ G +T+ A +E+ PP
Sbjct: 815 DEKPIWLHKGIMVELRGRSGYIASV-----DGYETTVVLDDGATETVRA--DELSTRPPA 867
Query: 788 KTDKIKIMGG--PHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILA 833
K D + ++ G H + + +D +G+++ D+ I+ + LA
Sbjct: 868 KDDTVFVLPGSPSHPESVALFVTIDHDEGVIR--KGADLAIVPLQFLA 913
>gi|361124222|gb|EHK96330.1| putative Transcription elongation factor SPT5 [Glarea lozoyensis
74030]
Length = 1039
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 216/754 (28%), Positives = 341/754 (45%), Gaps = 124/754 (16%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K +IY+EA + + + A GL N+Y + K+ ++ I+EM D+L V K L +VR+
Sbjct: 264 MKGFIYVEAQRASDIMAALDGLMNVYPRTKMQMIAIKEMPDLLRVH-KTPPLEPGAYVRL 322
Query: 81 KIG-NYKGDLAKVVDVDNVRQRVTVKLIPRIDL---QALANKLEGREVAKKKPFV---PP 133
K Y GDLA+V+DV + + V+ +PR+D + L L+G +K+ PP
Sbjct: 323 KRPPKYAGDLAQVIDVTDTGLELRVRYVPRLDYGLHEDLNAPLDGPNGKRKRAPAGPRPP 382
Query: 134 PRFMNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTF 192
RF + EA++ H + + T Y+ G + +GF K + +++I ++ PT
Sbjct: 383 SRFFSEVEAKKRHAKYLTGNPQTKTWTYY----GDEYVNGFCEKDIKIQAIQVADVTPTL 438
Query: 193 DELEKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDE 249
+E+ +F + G++G +I A ++L A+ ++ GD V V +G+ K +KG +
Sbjct: 439 EEVTRFSSGGDDGTENIDLNALAASLKASTANASYLPGDIVEVYEGEQKGVKGKAVSIQG 498
Query: 250 ENVH---IRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQA-GATGMVLKVEQHVLI 305
+ V + ++G +T+ V K L K F G+HVKV+ G++ GMV+K+ + +
Sbjct: 499 DIVTMAVLEGALRG--QTIEVPVKGLRKRFREGDHVKVIGGSRYRDEVGMVVKIAEDRVT 556
Query: 306 ILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVL 365
ILSD +I VF+ D+ E+S+ + G + +G YEL DLV LD + +++V+ E+ VL
Sbjct: 557 ILSDQNNSEITVFSKDLREASD-SGGASSLGQYELWDLVQLDPATVACVVKVDRESLVVL 615
Query: 366 KGVPDRPEVALVKLREIKCKLEKKSN---VQDRNKNTVAVKDVVRIVEGPCKGKQGPVEH 422
+ V +I K+EK+ DR + + D V+ E + + G V H
Sbjct: 616 D---QNNQTRTVMPSQISNKIEKQRRGAVATDRGGAQINMDDNVK--EHGGEMRTGKVIH 670
Query: 423 IYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSP 482
YR LF+ + +AG ++S+ V A G A NS+ P + ++P
Sbjct: 671 SYRTYLFLRNPAQSTNAGIFVTRTSAVNSV---TAKGIVQASAGPDLNSMN--PAMKRNP 725
Query: 483 GRYSRG--GPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQ 540
+ G PP G D +G TV +R GPYKG G V + + RVEL ++
Sbjct: 726 AGGAGGDMAPPK-------SFGRDRSIGQTVTIRKGPYKGLLGIVKETSDNNARVELHTK 778
Query: 541 MKVVTVDRSMIS--DNVVVS------------------------------------TPYR 562
K V V + ++ D + + TP
Sbjct: 779 NKTVNVPKDALAFKDKLTGASIDPGTRGGRGGFTPRGGRGGFGGATPGGGGWDGGRTPGG 838
Query: 563 D---TPRYGMGSETPMHPSRTPL-HPYMTPMRDAGA-TP--------IHDGMRTPMRD-- 607
D TP +G G P +RT TP AG TP + G +TP
Sbjct: 839 DTGRTPAWGAGRINPYDGNRTSYGGGNRTPAWSAGGKTPAYGMSNDAFNAGSKTPGYSGG 898
Query: 608 ----RAWNPYTPM---SPPRDNWEDGNP---GSWGTSPQYQPGSPPSRAYEAPTPGSGWA 657
AW TP +P DNW N SWG S AY+APTPG+
Sbjct: 899 TSGGDAWGSKTPAYQPTPAADNWGSSNHSGGNSWG-----------SNAYDAPTPGAAM- 946
Query: 658 STPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGG 691
S P +A TP S+ P+PY TPGG
Sbjct: 947 SAPTPAAINAPTPGAYSAP---TPAPYSAPTPGG 977
>gi|336261360|ref|XP_003345469.1| hypothetical protein SMAC_07456 [Sordaria macrospora k-hell]
gi|380088145|emb|CCC13820.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1069
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 232/795 (29%), Positives = 363/795 (45%), Gaps = 127/795 (15%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQKVM-LVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA ++ + A G+ N+Y + M LV I++M D+L V K +L WVR+
Sbjct: 282 MKGYIYVEAQRQNDILVALDGILNVYPRSNMHLVEIKDMPDLLRV-IKTPNLEPGAWVRL 340
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN---KLEG-REVAKKKPFVPPPR 135
K + GDLA+V+DV V+ IPR+D + + +G R+ PP R
Sbjct: 341 KKPAKHAGDLAQVIDVTENGLEARVRFIPRLDYGVRDDPVFQADGKRKRPGVPGPRPPQR 400
Query: 136 FMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDEL 195
+ EAR+ H R + +P T + N G F++GF K + ++ + +N+ P+ +E+
Sbjct: 401 LFSEAEARKRHPR-HLQGNPQTNSW--NYNGDDFENGFQVKDIKIQQLEVKNVNPSLEEV 457
Query: 196 EKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
KF + E+G ++ A +TL + K ++ GD + V +G+ + + G V + V
Sbjct: 458 TKFASGAEDGTENLDLKALAATLKDSAKSVAYVPGDIIEVYEGEQQGVIGKATNVQGDIV 517
Query: 253 HIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDT 310
++ L +T+ V +K L K F G+HVKV+ G++ GMV+K+ + +L+D
Sbjct: 518 TLQVTEGDLAGRTIDVPNKGLRKRFRIGDHVKVIGGSRFRDEVGMVVKIVDDRVTLLTDQ 577
Query: 311 TKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPD 370
T +I VF+ D+ E+S++ G +G Y L DLV LD + G I++V+ E+ VL D
Sbjct: 578 TNTEITVFSKDLREASDIG-GQGSLGQYSLLDLVQLDATTVGCIVKVDRESVVVLDQNGD 636
Query: 371 RPEVALVKLREIKCKLEKK--SNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL 428
+V + +I KL K+ + DRN + + + DVVR G + +QG + H++R +
Sbjct: 637 TKQV---QPSQITNKLPKRKFAVAADRNGSEIRLDDVVREYGG--QQRQGKIIHVHRSYI 691
Query: 429 FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN-GDAYSRFNSLRTPPRIPQSPGRYSR 487
F+H E+AG +++ V A G RN A +S+ P + ++P +
Sbjct: 692 FLHTTTTNENAGVFVTRANGVTTVA---AKGGRNTATAGPDLSSMN--PALKRNPA--AN 744
Query: 488 GGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVD 547
G A R G D + TV +R G +KG G V D RVEL S+ K++T+
Sbjct: 745 GKQMAAPRTFG----PDRAINQTVVIRRGGHKGLLGIVKDTTDTHARVELHSKGKIITIP 800
Query: 548 RSMIS--DNVV---------------------------VSTPYRD-----TPRYGMGSET 573
++ +S D + TP TP +G T
Sbjct: 801 KADLSFKDKITGKTIDINQRGGSRGGFGGGGRGGGEFGSRTPMASGGSDRTPAWGSSRST 860
Query: 574 PMHP--------SRTP--------LHPY---MTPMRDAGA-------TPI-HDGMRTPMR 606
P SRTP ++PY TP A A TP H G RTP
Sbjct: 861 ARTPAWNRDAGGSRTPAWNDGSRTVNPYDGSRTPYGGATAYGGIGSRTPAWHSGSRTPAP 920
Query: 607 D-RAWNPYTP-MSPPRDNWEDGNPGSWGTSPQ---------YQPGS---PPSRAYEAPTP 652
D TP S D+W PG ++P Y PG+ S AY+APTP
Sbjct: 921 DGFGHGSKTPAWSAGSDSWGSKTPGYGASAPTPGASGDAWGYTPGAGGGNSSSAYDAPTP 980
Query: 653 GSGW-ASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMT-PNSASYLPGTPGGQP 710
G G A TPG +NAP+P S P P++ P ++ G G
Sbjct: 981 GGGLSAPTPG--------------AALNAPTPGAYSAPTPAPVSAPTPGAWQGGWGSGDA 1026
Query: 711 MT-PGTGGLDAMSPV 724
++ P G L A +P
Sbjct: 1027 VSAPTPGALGAPTPA 1041
>gi|440639963|gb|ELR09882.1| hypothetical protein GMDG_04360 [Geomyces destructans 20631-21]
Length = 1060
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 218/780 (27%), Positives = 349/780 (44%), Gaps = 108/780 (13%)
Query: 10 ELQIRSVI----ALDHLKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLA 64
EL I S A +K YIY+EA ++A ++ A GL N+Y + K++LV I+EM D+L
Sbjct: 258 ELSIISAFERANAAAPIKGYIYVEAQRQAEIESALDGLMNVYPRTKMLLVEIKEMPDLLR 317
Query: 65 VESKAIDLSRDTWVRMKI-GNYKGDLAKVVDVDNVRQRVTVKLIPRID------LQALAN 117
V SK L +VR+K Y GDLA+VVDV V V+ +PR+D +
Sbjct: 318 V-SKTAPLEPGAYVRLKRPAKYAGDLAQVVDVTENGLEVRVRFVPRLDYGLHEDMNTPGL 376
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGD---YFENIGGMLFKDGFL 174
+G+ PPPR + EA++ H R +TG+ N G + +G+
Sbjct: 377 DAQGKRKRANAGPRPPPRLFSDVEAKKRHARY------LTGNPQTKIWNYMGDEYNNGYC 430
Query: 175 YKTVSMKSISAQNIQPTFDELEKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVI 231
K V ++ I +++ PT +E+ +F + ++G ++ A ++L A+ ++ GD +
Sbjct: 431 EKDVKIQQIQVKDVNPTLEEVTRFASGADDGTENLDLNALAASLKASTANASYLPGDIIE 490
Query: 232 VIKGDLKNLKGWVEKVDEENVHIRPE---MKGLPKTLAVNSKELCKYFEPGNHVKVVSGT 288
V +G+ K + G + + V + +KG +T+ V +K L K F G+HVKV+ G+
Sbjct: 491 VYEGEQKGVFGKAIAIQADIVTMAVTDGVLKG--QTIEVPTKGLRKRFRQGDHVKVIGGS 548
Query: 289 Q-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLD 347
+ GMV+K+ Q + +L+D ++ VF+ D+ ESS+ + G +G +EL DLV LD
Sbjct: 549 RFRDEVGMVVKIVQDRVTLLTDQGNNEVTVFSKDLRESSD-SGGAGSLGQFELWDLVQLD 607
Query: 348 NNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKK--SNVQDRNKNTVAVKDV 405
+ II+V+ E+ VL + V +I KLE++ + DRN + V DV
Sbjct: 608 PATVACIIKVDRESLTVLD---QNEQTRTVMPSQIANKLERRKFAVATDRNGSEVRTDDV 664
Query: 406 VR-IVEGPCKGKQGPVEHIYRGILFIH-DRHHLEHAGFICAKSSSCVVVGGSRANGDRNG 463
V+ I +G G+QG + HI+R LF+H E+AG ++++ + S G
Sbjct: 665 VKEIGDG---GRQGKIMHIHRSFLFLHHSAEQNENAGVFVVRTTNIATI--SATGGRIIA 719
Query: 464 DAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRG 523
A +S+ ++ G P GR+R +G TV ++ GPYKG G
Sbjct: 720 SAGPDLSSMNPAIKLNPQGGNMDMPPPKFVGRDRS--------IGQTVTIKKGPYKGLLG 771
Query: 524 RVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYG--MGSETPMHPSRTP 581
V + + RVEL ++ K V V + ++ ++D PR G + +
Sbjct: 772 IVKETTDTTARVELHTKSKTVNVPKDALA--------FKD-PRTGNTIDPNSRGGYRGGG 822
Query: 582 LHPYMTPMRDAGATPIHDGM-------------RTPMRDRA-----------WNPYTPMS 617
GATP +G RTP RA W
Sbjct: 823 GGSRGGRGGFGGATPSGNGWDGGRTPGGAGGSDRTPAWGRAAASNGGGRTPAWKAAADAG 882
Query: 618 PPRDNWEDGNP----GSWGTSPQYQPGSPPSRAY--------------EAPTPGSGWAST 659
W+DG+ G+ +P +Q G + AY + P GSG +
Sbjct: 883 GRTPAWQDGSRTVAYGAGNRTPAWQAGGK-TPAYGGFGSGSDGFAAGSKTPAYGSGGSDA 941
Query: 660 PG-GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPM-TPGTGG 717
G G+ + A + + S+T + Y TPG Q P TPG TPG G
Sbjct: 942 WGSGSKTPAYSSNEPSNTSSWGANSYDAPTPGAQVTAPTPGGLNAPTPGAYSAPTPGASG 1001
>gi|367031594|ref|XP_003665080.1| hypothetical protein MYCTH_2308407 [Myceliophthora thermophila ATCC
42464]
gi|347012351|gb|AEO59835.1| hypothetical protein MYCTH_2308407 [Myceliophthora thermophila ATCC
42464]
Length = 1084
Score = 209 bits (532), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 214/753 (28%), Positives = 337/753 (44%), Gaps = 81/753 (10%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA ++ + A G+ ++Y + K++LV +++M D+L V +K L WVR+
Sbjct: 284 MKGYIYVEARRQNDILIALDGVLDVYPRTKMILVELKDMPDLLRV-NKTPSLEPGAWVRL 342
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEG------REVAKKKPFVPP 133
K + GDLA+V+DV V+ IPR+D + R+ PP
Sbjct: 343 KRPAKHAGDLAQVLDVTENGLEARVRFIPRLDYGVRDDTSSSLTADGKRKRPGMPGPRPP 402
Query: 134 PRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
R + EAR+ H R + +P T + G F++GF K + ++ + +++ PT +
Sbjct: 403 QRLFSEAEARKRHPRY-IQGNPQTNTW--TYMGEDFENGFQVKDIKIQHLEIKDVNPTLE 459
Query: 194 ELEKFRTPGENGESDIASLSTLFANRKKGH----FMKGDAVIVIKGDLKNLKGWVEKVDE 249
E+ KF + E+G ++ L L A+ K + ++ GD + V +G+ + + G V
Sbjct: 460 EVTKFASGSEDGTENL-DLKALAASLKDSNASSAYLPGDVIEVYEGEQQGVVGKAVSVQG 518
Query: 250 ENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIIL 307
+ V ++ L +T+ V +K L K F+ G+HVKV+ G++ GMV+K+ + IL
Sbjct: 519 DIVTLKVTEGDLAGQTIEVPNKGLRKRFKTGDHVKVIGGSRFRDEVGMVVKIVDDRVTIL 578
Query: 308 SDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKG 367
+D T ++ VF+ D+ E+S++ G +G Y L DLV LD + I++V+ E+ VL
Sbjct: 579 TDQTNTEVTVFSKDLREASDIG-GQGSLGQYSLLDLVQLDPTTVACIVKVDRESMVVLDQ 637
Query: 368 VPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYR 425
D +V +I KL K+ DRN + + + DVVR G + +QG + HI+R
Sbjct: 638 NGDTRQVMP---SQIANKLPKRRTAVAADRNGSEIRLDDVVREYGG--QQRQGKIIHIHR 692
Query: 426 GILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRY 485
+F+H E+AG ++ + V A G R + S + P + ++P +
Sbjct: 693 SFIFLHSNATTENAGVFVTRAGNVTTVA---AKGGRTANTNSGPDLSTMNPALKRNPAQN 749
Query: 486 SRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVT 545
PP G D +G TV +R G YKG G V D RVEL + K+VT
Sbjct: 750 QPMQPPK-------TFGRDRALGQTVSIRRGGYKGLMGIVKDTTDTDARVELHGKNKIVT 802
Query: 546 VDRS--MISDNVVVST--------------------PYRDTPRYGMGSETPMHPSRTPLH 583
V ++ + D V T D P GS TPM
Sbjct: 803 VPKADLIFKDKVTGKTIDIYSRSGGPGFGGLGRGGFGSGDRP---GGSRTPMGAGGGERT 859
Query: 584 PYMTPMRDAGATPI-----HDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQ 638
P + A TP G RTP P R + DG+ ++G + Y
Sbjct: 860 PAWGVSKAAARTPAWGRAEASGSRTPAWGDGSRTVNPYDGSRTAYGDGSRTAYGGATSYG 919
Query: 639 PGSPPSRAYEAPTP---GSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMT 695
P+ + A TP G G S S + P S + A +P P GG
Sbjct: 920 GSRTPAWSSSAKTPAHDGFGHGSKTPAYGSSSSDPWGSKTPAYGASAP-TPGASGG---- 974
Query: 696 PNSASYLPGTPGGQPM----TPGTGGLDAMSPV 724
+S Y PG GG TPG GL A +P
Sbjct: 975 -DSWGYTPGPSGGSHAYDAPTPGA-GLGAPTPA 1005
>gi|340518220|gb|EGR48462.1| transcription elongation factor 5 [Trichoderma reesei QM6a]
Length = 1057
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 215/761 (28%), Positives = 353/761 (46%), Gaps = 101/761 (13%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K+++Y+E ++ + A G+ N+Y K+ LV I++M ++L V +K L WVR+
Sbjct: 270 MKSFVYVETQRQTDILVALDGILNVYPHSKLTLVDIKDMPELLRV-TKTPTLEPGAWVRL 328
Query: 81 -KIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL----QAL-ANKLEGREVAKKKPFV--- 131
K + GDLA+V+DV V+ IPR+D +AL A +G+ K+ P +
Sbjct: 329 RKPAKHNGDLAQVIDVTENGLEARVRFIPRLDYGMRDEALSAVTADGKR--KRAPGMGPR 386
Query: 132 PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPT 191
PP R + EAR+ H R + +P T + G F++GF K V ++ + ++ P+
Sbjct: 387 PPQRLFSEVEARKRHPR-HIQGNPTTNTW--TYMGEEFENGFQVKDVKIQQLVVTDVNPS 443
Query: 192 FDELEKFRTPGENGESDIASLSTLFANRKKGH----FMKGDAVIVIKGDLKNLKGWVEKV 247
+E+ +F + ++G ++ L L A+ K + ++ GD + V G+ + + G V
Sbjct: 444 LEEVTRFASGADDGTENL-DLKALAASLKDSNTLVTYLPGDIIEVYAGEQRGVVGKATNV 502
Query: 248 DEENVHI---RPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHV 303
+ V + ++KG +++ V K L K F+ G+HVKV+ G++ G V+K+ +
Sbjct: 503 QGDIVTMFVTEGDLKG--QSIEVPIKGLRKRFKIGDHVKVIGGSKFQDEVGTVVKISEDR 560
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQ 363
+ +L+D T ++ VF+ D+ E+S++ G +G YEL DLV LD + G I++V+ E+
Sbjct: 561 VTLLTDHTNNEVTVFSKDLREASDIG-GQGSLGQYELHDLVQLDPTTVGCIVKVDRESLV 619
Query: 364 VLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
VL D +V ++ K K++ DR + + + DVV+ G + +QG + HI
Sbjct: 620 VLDQFGDTRQVMPSQIPN-KLPKRKQAVAADREGSEIRLDDVVKEFSG--QQRQGKIIHI 676
Query: 424 YRGILFIHDRHHLEHAGFICAKSS--SCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQS 481
+R +F+H E+AG K+S + + G R N +G S N P
Sbjct: 677 HRSYVFLHTHATNENAGVFVTKASMVNTIAAKGGRVNAAASGPDLSTMN----PALKIHK 732
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G ++ GR+R + TV ++ G YKG G V D RVEL ++
Sbjct: 733 NGTENKPIAKTFGRDRA--------INQTVIIKKGYYKGLLGIVKDTTDTHARVELHTKN 784
Query: 542 KVVTVDRSMISDNVVVSTPYRD-------------------TPRYGMGSETPMHP---SR 579
K +T+ + +S ++ D P + GS TPM R
Sbjct: 785 KTITLPKDSLSYKDKITGTTIDINGRGRPTPGGAGRGSGDRVPGWQGGSRTPMGAGGSDR 844
Query: 580 TPLHPYMTPMRDAGATPI-----HDGMRTPMR---DRAWNPYTPMSPPRDNWEDGNPGSW 631
P TPM G TP + G RTP R NPY DG+ ++
Sbjct: 845 VPAWGSRTPMA-GGRTPAWKGQDYSGSRTPAWADGSRTVNPY-----------DGSRTAY 892
Query: 632 GT---SPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTY----VNAPSPY 684
G+ +P +Q G+ A +A GS TP Y+ G +S S V+AP+P
Sbjct: 893 GSGSRTPAWQAGARTPAAGDAFGAGS---RTPA--YAGGGDSWNSGSKTPAWGVSAPTPG 947
Query: 685 LPSTP--GGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSP 723
G P +SA+Y TPGG P G L A +P
Sbjct: 948 ASGNDSWGYTPAATSSAAYDAPTPGGAMSAPTPGALSAPTP 988
>gi|392576996|gb|EIW70126.1| hypothetical protein TREMEDRAFT_71529 [Tremella mesenterica DSM
1558]
Length = 1058
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 194/689 (28%), Positives = 321/689 (46%), Gaps = 75/689 (10%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQK-VMLVPIREMTDVLAVESKA 69
+++ S D L I++EA + V A KG+ ++ K V VP EM +L ++ K
Sbjct: 230 IEVLSCFFRDSLDGMIFLEARHISAVNLAIKGIIGVFLGKGVKRVPTEEMAPLLKIKKKD 289
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRV-TVKLIPRIDLQALANKLEGREVAKKK 128
++L++ WVRMK G Y GDLA+V DVD + V T+K +PRIDL + E K
Sbjct: 290 VELTQGMWVRMKRGKYTGDLAQVADVDQLTSGVVTIKFLPRIDLTPREKRKERNATNGKA 349
Query: 129 PFV---PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISA 185
PP DE R+++ + R FE G + DGF Y+ V + +
Sbjct: 350 AGSTNRPPAAPFQYDEVRKVYGKNSIRGGQGGSHIFE---GDEYIDGFCYRDVKLNLVQT 406
Query: 186 QNIQPTFDELEKFRTPGEN-GESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
+++ PT +E+ KF N + D+++++ + + GD V V +G+ L G V
Sbjct: 407 EDVHPTLEEVSKFSGDETNEAKIDLSAIADANKHVSASALVPGDKVEVHEGEQAGLTGIV 466
Query: 245 EKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHV 303
V + + IR E L +T+ V +K + K F+ G HVKV++G A TGMV++V+ +
Sbjct: 467 IGVLPDTISIRAEGGDLHGQTIEVPAKSVRKRFDVGEHVKVLNGKNADVTGMVVEVKGDI 526
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQ 363
+ ++SD + +++VF D+ ++++ + Y+L D+++LD+ + VI +++ +
Sbjct: 527 VTLMSDQNEREVQVFTKDIRRAADLGDSTVRNSVYDLHDMIMLDSTTAAVIFKIDGNVLR 586
Query: 364 VLKGVPDRPEVALVKLREIKCKLEKK--SNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVE 421
VL V V +++ + + K + D N + V ++++ EG + +QG V
Sbjct: 587 VLD---QNGTVRTVSPQQVALRRDNKQYAVATDAQGNEMRVGNLMKETEG--ENRQGEVI 641
Query: 422 HIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQ 480
+I+R I F+ +R + E+ A++ S + V + D ++ N P Q
Sbjct: 642 NIFRSIFVFLFNRDYAENGHVFVARAQSLLSVTPKSSASD-----LAKMN----PALNAQ 692
Query: 481 SP-GRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELES 539
P G S PP N+ + LV T V V G KG G + DV+G + RVEL++
Sbjct: 693 LPFGGASLMPPPMATVNK------NRLVNTLVVVVKGTSKGLMGIIKDVQGDNARVELKT 746
Query: 540 QMKVVTVDRSMISDNVVVSTPYRDTPR--------YGMGS-ETPMHP-SRTPLHPYMTPM 589
K +T++ + I R P+ YG G+ T P ++PY P
Sbjct: 747 NNKTLTINLASIK---------RKDPKTGNTYPLEYGGGTFGTAGRPLGNYDVNPYAPPT 797
Query: 590 RDAGATPIHD-GMRTPMR--DRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPG----SP 642
+ G TP + G RTP NPY GNP G +P Y +P
Sbjct: 798 -NGGMTPGYAVGGRTPAARFGETPNPYA---------TGGNPYGGGRTPAYGLAGGGRTP 847
Query: 643 PSRAYEAPTPGSGWAS---TPGGNYSDAG 668
+ TP GWA+ TP + D G
Sbjct: 848 AAGLAGGKTP--GWAAGGKTPARGFGDGG 874
>gi|358390672|gb|EHK40077.1| hypothetical protein TRIATDRAFT_252337 [Trichoderma atroviride IMI
206040]
Length = 1056
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 209/763 (27%), Positives = 353/763 (46%), Gaps = 104/763 (13%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K+++Y+E ++ + A G+ N+Y K+ LV I++M ++L V +K L WVR+
Sbjct: 266 MKSFVYVETQRQTDILVALDGILNVYPHSKLTLVDIKDMPELLRV-TKTPTLEPGAWVRL 324
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDL----QAL-ANKLEGREVAKKKPFV--- 131
+ + GDLA+V+DV V+ IPR+D +AL A +G+ K+ P +
Sbjct: 325 RRPQKHNGDLAQVIDVTENGLEARVRFIPRLDYGMRDEALSAVSADGKR--KRPPGMGPK 382
Query: 132 PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPT 191
PP R + EAR+ H R + +P T + N G F++GF K V ++ + ++ P+
Sbjct: 383 PPQRLFSEIEARKRHPR-NIQGNPTTNTWTYN--GEEFENGFQVKDVKIQQLVVTDVNPS 439
Query: 192 FDELEKFRTPGENGESDIASLSTLFANRKKGH----FMKGDAVIVIKGDLKNLKGWVEKV 247
+E+ +F + ++G ++ L L A+ K + ++ GD + V G+ + + G V
Sbjct: 440 LEEVTRFASGADDGTENL-DLKALAASLKDSNTLVTYLPGDIIEVYAGEQRGVVGRATNV 498
Query: 248 DEENVHI---RPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHV 303
+ V + ++KG +++ V K L K F+ G+HVKV+ G++ G V+K+ +
Sbjct: 499 QGDIVTMFVTEGDLKG--QSIEVPIKGLRKRFKIGDHVKVIGGSKFQDEVGTVVKISEDR 556
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQ 363
+ +L+D T ++ VF+ D+ E+S++ G +G YEL DLV LD + G I++V+ E+
Sbjct: 557 VTLLTDQTNNEVTVFSKDLREASDIG-GQGSLGQYELHDLVQLDPTTVGCIVKVDRESLV 615
Query: 364 VLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
VL D +V ++ K K++ DR + + + DVV+ G + +QG + HI
Sbjct: 616 VLDQFGDTRQVMPSQIPN-KLPKRKQAVAADREGSEIRLDDVVKEFSG--QQRQGKIIHI 672
Query: 424 YRGILFIHDRHHLEHAGFICAKSS--SCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQS 481
+R +F+H E+AG K+S + + G R N +G + N P
Sbjct: 673 HRSYVFLHTHATNENAGVFVTKASMVNTIAAKGGRVNAAASGPDLTTMN----PALKIHK 728
Query: 482 PGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQM 541
G ++ + GR+R + TV ++ G YKG G V D RVEL ++
Sbjct: 729 NGTENKPIAKSFGRDRA--------INQTVIIKKGAYKGLLGIVKDTTDSHARVELHTKN 780
Query: 542 KVVTVDRSMISD-------NVVVSTPYRD-------------TPRYGMGSETPM---HPS 578
K +TV R ++ N+ ++ P + GS TPM
Sbjct: 781 KTITVPRDSLNFKDKNTGLNIDINGRGGRSASGGAGRGSGDRVPGWQGGSRTPMGSGGSD 840
Query: 579 RTPLHPYMTPMRDAGATPI-----HDGMRTPMR---DRAWNPYTPMSPPRDNWEDGNPGS 630
R P TP G TP + G RTP R NPY DG+ +
Sbjct: 841 RVPAWGSRTPAA-GGRTPAWKGQDYSGSRTPAWADGSRTVNPY-----------DGSRTA 888
Query: 631 WGT---SPQYQPGSPPSRAYEAPTPGSGWAS---TP----GGNYSDAGTPRDSSSTYVNA 680
+G+ +P +Q G+ P PG + + TP GG+ ++G+ +
Sbjct: 889 YGSGSRTPAWQAGA------RTPAPGDAFGAGSRTPAYAGGGDSWNSGSKTPAWGASAPT 942
Query: 681 PSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSP 723
P + G P NS++Y TPGG P G L A +P
Sbjct: 943 PGASGNDSWGYTPAATNSSAYDAPTPGGAMSAPTPGALSAPTP 985
>gi|346322278|gb|EGX91877.1| transcription initiation protein spt5 [Cordyceps militaris CM01]
Length = 1036
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 216/761 (28%), Positives = 342/761 (44%), Gaps = 101/761 (13%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K +YIEA ++ + A G+ N+Y + K+ LV I++M ++L V +K L W RM
Sbjct: 255 MKGIVYIEAQRQTDILVALDGVLNVYPRTKMTLVDIKDMPELLRV-TKTATLQPGAWCRM 313
Query: 81 KIG-NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPF----VPPPR 135
+ + GDLA+V+ V V+ IPR+D + + ++ +K+ F PP R
Sbjct: 314 RRPIKHNGDLAQVLAVTENGLEARVRFIPRLDYGVRDDNMT-QDGKRKRAFGAGPKPPQR 372
Query: 136 FMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDEL 195
+ EAR+ H R + +P T + G F++GF K V ++ + ++ PT +E+
Sbjct: 373 LFSEVEARKRHPRY-IQGNPTTNTW--TYMGDEFENGFQVKDVKIQQLILTDVNPTLEEV 429
Query: 196 EKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
+F + E+G ++ A ++L + K ++ GD + V G+ K + G V + V
Sbjct: 430 TRFASGAEDGTENLDLKALAASLKDSNTKVTYLPGDVIEVYSGEQKGVVGKATNVQGDIV 489
Query: 253 HIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDT 310
+ L +T+ V K L K F+ G+HVKV+ G++ G V+K+ + + +L+D
Sbjct: 490 TMTVTEGDLAGQTIEVPIKGLRKRFKVGDHVKVIGGSRFQDEVGTVVKISEDKVTLLTDQ 549
Query: 311 TKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPD 370
T ++ VF+ D+ E+S++ G +G YEL DLV LD + G +++V+ ++ VL D
Sbjct: 550 TNNEVTVFSKDLREASDIG-GQGSLGQYELHDLVQLDMTTVGCVVKVDRDSMVVLDQFGD 608
Query: 371 RPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFI 430
+V ++ K K++ DR + + + DVV+ G + +QG + HI+R +F+
Sbjct: 609 TRQVMPSQISN-KIPKRKQAVAADREGSEIRLDDVVKEYTG--QQRQGKIIHIHRSYVFL 665
Query: 431 HDRHHLEHAGFICAKSS--SCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRG 488
H E+AG KSS + V G R N +G S N P G ++
Sbjct: 666 HTNDTNENAGVFVTKSSLVNTVAAKGGRVNAATSGPDLSSMN----PALKIHKNGSENKP 721
Query: 489 GPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDR 548
P G D + TV ++ G YKG G V D RVEL ++ K++TV R
Sbjct: 722 ITPVK------MFGRDKAINQTVIIKKGAYKGLLGIVKDSTDTHCRVELHTKSKIITVPR 775
Query: 549 SMISDNVVVSTPYRD----------------TPRYGMGSETPMH---PSRTPLHPYMTPM 589
++ S D P + GS TP R P TPM
Sbjct: 776 DSLNFKDKTSGASIDINGRGRGAPGGGRGDRMPSWQGGSRTPAPGGVSDRVPAWGSRTPM 835
Query: 590 RDAGATPI-----HDGMRTPMR---DRAWNPYTPMSPPRDNWEDGNPGSWGT---SPQYQ 638
G TP + G RTP R NPY DG+ ++G+ +P +Q
Sbjct: 836 ATGGRTPAWKGQDYSGSRTPAWADGSRTVNPY-----------DGSRTAYGSGSRTPAWQ 884
Query: 639 PGS---PPSRAY------EAPTPGSGW------------ASTPG--GNYSDAGTPRDSSS 675
G+ P A+ A T G W A TPG GN S TP S+
Sbjct: 885 SGARTPAPGDAFGAGSRTPAYTGGDSWNSGSKTPAWGTSAPTPGASGNDSWGYTPGASAG 944
Query: 676 TYVNAPSPYLP---STPGGQPMTPNSASYLPGTPGGQPMTP 713
Y +AP+P P TPG P +Y TP TP
Sbjct: 945 AY-DAPTPGGPLGAPTPGAF-AAPTPGAYSAPTPAASAPTP 983
>gi|149248452|ref|XP_001528613.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448567|gb|EDK42955.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1058
Score = 207 bits (526), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 263/563 (46%), Gaps = 69/563 (12%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVESKA 69
L I +V D + Y+YIEA + + +A +G+ NIY++ +LV ++E D+L V+S
Sbjct: 306 LDILTVFQRDSFRGYVYIEAKRPDAIDKALQGMVNIYTRDKLLVSVKEYPDLLKQVKSSD 365
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKP 129
++L +VR+ G YKGDLA V ++ V K++PR+D E V K +
Sbjct: 366 VELKPGVYVRIARGKYKGDLAIVDNLSENGLDVRCKVVPRLDYGRNDEVDEDGRVIKLRL 425
Query: 130 FVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIG------------GMLFKDGFLYKT 177
PP RF DP F+ + G + DG+LYK
Sbjct: 426 KPPPQRF-----------------DPQAAKMFDGLNLQQKGARVYVYKGEEYVDGYLYKD 468
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH------FMKGDAVI 231
++ I Q++QPT ELEKF+ D+ + N+ G F GD V
Sbjct: 469 FKLQYIQTQDVQPTLGELEKFQAGSNEDALDLKQIVDSMRNKSSGETSQSTPFQPGDKVE 528
Query: 232 VIKGDLKNLKGWVEKVDEENVHIRPEMKGLP----KTLAVNSKELCKYFEPGNHVKVVSG 287
V +G+ G V + + I+ P K L + +L K F+ G+HV++V G
Sbjct: 529 VRRGEQAKTVGTVVEASLREIIIKVTNSSDPQFINKRLTIPPSDLRKIFDEGDHVRIVEG 588
Query: 288 TQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITK-----IGDYELRD 342
+ TG+V+K+E ++++SD +KED++VFA+ +V++++ ++ + K Y+++D
Sbjct: 589 KHSDETGLVIKIEGDSVLLVSDQSKEDVKVFANYLVKATDASSTVEKRVGSGASKYDIKD 648
Query: 343 LVLLDNNSFGVIIRVESEAFQVLKG----VPDRPEVALVKLREIKCKLEKKSNVQDRNKN 398
LV L + GVI++ ES F+VL + RP K+++ + ++ DRN
Sbjct: 649 LVELSAATVGVIVKAESNIFEVLTSDGRLIDVRPSAIASKVKQSR----REQIATDRNGF 704
Query: 399 TVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAK--SSSCVVVGGSR 456
T+ V D V+ G KG++G + HIY+ LF+ +E+ G A S V S
Sbjct: 705 TIKVGDTVKESSGE-KGREGVILHIYKNTLFVKSNDIIENLGIFVANRMGVSTVSTKDSM 763
Query: 457 ANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLG 516
+ D S +++ P + G + R GG D L+ V + +G
Sbjct: 764 VSKSFGPDLTSMNPNIKAPENLAMQ-----------GLKTRA--GGRDKLLYKDVAITVG 810
Query: 517 PYKGYRGRVVDVKGQSVRVELES 539
YKG +G+V + RVEL +
Sbjct: 811 SYKGLKGKVSEADDVYARVELHT 833
>gi|448110902|ref|XP_004201715.1| Piso0_001914 [Millerozyma farinosa CBS 7064]
gi|359464704|emb|CCE88409.1| Piso0_001914 [Millerozyma farinosa CBS 7064]
Length = 1030
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 208/747 (27%), Positives = 343/747 (45%), Gaps = 100/747 (13%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVESKA 69
L+I +V D + YIYIEA K ++ A G+ N+Y+++ +LVP+RE D+L V+S
Sbjct: 328 LEILTVFQRDSFRGYIYIEAKKPEAIERALAGMVNVYAKQRLLVPVREYPDLLKQVKSSD 387
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-QALANKLEGREVAKKK 128
+++ +VR+ G YK DLA V ++ V KL+PR+D + +G+ + K
Sbjct: 388 VEIVPGIYVRITRGKYKNDLAIVDNLSENGLDVRCKLVPRLDYGKNDEFDKDGKRIRSKA 447
Query: 129 PFVPPPRFMNVDEARELHI--RVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQ 186
P PR N EA+ +H ++ R P T Y G + DGFLYK ++ I +
Sbjct: 448 R--PIPRLFNESEAK-MHDPEHLQHGRGPRTFIYR----GEEYIDGFLYKDFKLQYIQTK 500
Query: 187 NIQPTFDELEKFRTPG-ENGESDIASLSTLFANRK----KGHFMKGDAVIVIKGDLKNLK 241
++ P +EL++F+ E+ D+A+++ N+ F GD V V +G+
Sbjct: 501 DVHPRLEELDRFQAGNTEDDGLDLAAIAASLKNKNLDSNSTSFQPGDKVEVRRGEQARTV 560
Query: 242 GWV--EKVDEENVHIRP--EMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVL 297
G V ++E ++I + + + + L V + +L K F G+HV+V G TG+V+
Sbjct: 561 GKVIGTSLNEVTLNITDSGDSRLVNQHLTVPASDLRKVFAAGDHVRVTDGKHIDETGLVI 620
Query: 298 KVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGD-YELRDLVLLDNNSFGVIIR 356
K+E +++LSD T++DIRVFA+ ++++++ ++ G+ ++++DLV L+ ++ GVI+
Sbjct: 621 KIENDSVVLLSDQTQQDIRVFANYLIKATDASSNANASGNKFDIKDLVKLNASTVGVIVE 680
Query: 357 VESEAFQVLKGVPDRPEVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEGPC 413
E +AF++ + VK I KL+ ++ D+N V + D V+ G
Sbjct: 681 AEKDAFKL---ITSEGRTITVKPSGIASKLDLGRREQVATDKNGMPVKIGDTVKETLGDK 737
Query: 414 KGKQGPVEHIYRGILFIHDRHHLEHAGFICAK--SSSCVVVGGSRANGDRNGDAYSRFNS 471
K ++G + HIY+ LFI LE+ G + S + GS + + D N
Sbjct: 738 K-REGVIIHIYKTSLFIKSNDILENLGIFVTNCMNVSTITTKGSMVSKNLGPD----LNR 792
Query: 472 LRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
+ ++P P A + G D L+ V V G YKG G+V D
Sbjct: 793 MNPNLKLPN---------PIATAGLKTKIGNRDRLLNHDVIVNSGNYKGLMGKVRDADDT 843
Query: 532 SVRVELESQMKVVTVDRSMISDNVVV---STPYRDTPRYGMGSETPMHPSRTPLHPYMTP 588
R+EL S+ K + V ++ + NV+V S PY R+ +G+ + +
Sbjct: 844 FARIELHSKSKTIKVAKNSL--NVLVRGESVPY---LRF-IGASGGAQGNANNWNS---- 893
Query: 589 MRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTS--PQYQP------- 639
AG T + + AW M+P GN SWG S P Y
Sbjct: 894 ---AGRTKFNAPAFSSGSGSAWGKNGGMTPAA-----GNLSSWGGSKTPAYNAKNASEWG 945
Query: 640 GSPPSRAY------------------EAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAP 681
G+ + A+ A T G+G AST G S+ST+ +A
Sbjct: 946 GNGGASAWGGNGGASAWGGGASTWGGGASTWGNGGASTWGSG---------SASTWGSAK 996
Query: 682 SPYLPSTPGGQPMTPNSASYLPGTPGG 708
+ ST GG NS T GG
Sbjct: 997 NTGSNSTWGGSSTWDNSKRGKNSTWGG 1023
>gi|302890018|ref|XP_003043894.1| transcription initiation protein [Nectria haematococca mpVI 77-13-4]
gi|256724812|gb|EEU38181.1| transcription initiation protein [Nectria haematococca mpVI 77-13-4]
Length = 1053
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 220/789 (27%), Positives = 351/789 (44%), Gaps = 130/789 (16%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K +IY+EA ++ + A + N+Y K++LV I++M ++ V+ K L+ WVR+
Sbjct: 265 MKGFIYVEALRQTDIMRALDSMLNVYPHSKMVLVEIKDMPELFRVQ-KTPTLAPGAWVRL 323
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEG--REVAKKKPF------V 131
K + GDLA+V+DV V+ IPR+D + G + +K+PF
Sbjct: 324 KRPMKHSGDLAQVIDVTENGLEARVRFIPRLDYGMRDDAFTGVTADGKRKRPFGASAGPR 383
Query: 132 PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPT 191
PP R + EAR+ H R + +P T + G F++GF K + ++ ++ ++P+
Sbjct: 384 PPQRLFSEIEARKRHPR-HIQGNPTTNTW--QYMGDEFENGFQVKDIKIQQLTVAGVEPS 440
Query: 192 FDELEKFRTPGENGESDIASLSTLFANRK----KGHFMKGDAVIVIKGDLKNLKGWVEKV 247
+E+ +F + E+G ++ L L A+ K + ++ GD V V G+ K + G +V
Sbjct: 441 LEEVTRFASNAEDGTENL-DLKALAASLKDSGARATYLPGDIVEVYTGEQKGVVGKAMRV 499
Query: 248 DEENVHIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLI 305
+ V I E + + + V + L K F G+HVKV+ G++ GMV+K++ +
Sbjct: 500 QTDVVSITVTEGDLVGQEIDVPIRALRKRFRVGDHVKVIGGSKFRDEVGMVVKIQDDRVT 559
Query: 306 ILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVL 365
+LSD T +I VF+ D+ E+S++ G +G Y L DLV LD + G +++V+ E+ VL
Sbjct: 560 LLSDQTNAEITVFSKDLREASDIG-GQGSLGQYSLHDLVQLDPTTVGCVVKVDRESLVVL 618
Query: 366 KGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
D +V +I KL K+ N DRN + + +DVV+ G + +QG + HI
Sbjct: 619 DQFGDNRQVMP---SQIANKLPKRKNAVAADRNGSEIRFEDVVKEYTG--QQRQGKIIHI 673
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+R +F+H E+AG K+S + ++ G + N++ ++ ++ G
Sbjct: 674 HRSYVFLHTNDSKENAGVFVTKASMVNTIA-AKGGRVSGGSSGPDLNAMNPALKLHKN-G 731
Query: 484 RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKV 543
++ P G D + TV ++ G YKG G V D RVEL ++ K
Sbjct: 732 NENKPVQPVKSF------GRDKAIDQTVIIKKGAYKGLLGIVKDTTDTHARVELHTKSKT 785
Query: 544 VTVDRSMIS-------DNVVVSTPYRD------------TPRYGMGSETPMH---PSRTP 581
+TV + +S + +S R P + GS TPM R P
Sbjct: 786 ITVPKDCLSFKNKTTGATIEISGRGRGGYSGGAGRGGDRVPGWQGGSRTPMASGGSDRVP 845
Query: 582 LHPYMTPMRDAGATP---IHD--GMRTPMR---DRAWNPYTPMSPPRDNWEDGNPGSWGT 633
TP G TP HD G RTP R NPY DGN ++G+
Sbjct: 846 AWGSRTPAA-GGRTPAWKAHDMSGARTPAWADGSRTVNPY-----------DGNRTAYGS 893
Query: 634 ---SPQYQPG-----------------------------SPPSRAYEAPTPGS----GWA 657
+P +Q G P+ APTPG+ W
Sbjct: 894 GSRTPAWQAGGRTPAPGDAFGAGSRTPAYGGGDSWGSGSKTPAWGVSAPTPGASGNDSWG 953
Query: 658 STPG--GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG- 714
TPG G+ DA TP + AP+P G P +Y TP TPG
Sbjct: 954 YTPGASGSAYDAPTP----GAALGAPTP-------GAMNAPTPGAYSAPTPAVNAPTPGG 1002
Query: 715 -TGGLDAMS 722
GG A S
Sbjct: 1003 WQGGWGADS 1011
>gi|354547033|emb|CCE43766.1| hypothetical protein CPAR2_214100 [Candida parapsilosis]
Length = 918
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 160/554 (28%), Positives = 271/554 (48%), Gaps = 53/554 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVESKA 69
L I +V D K YIYIEA + + +A +G+ N++ + +LV ++E D+L V+S
Sbjct: 222 LDILTVFQRDSFKGYIYIEAKRSDAIDKALQGMVNVFLKDKLLVSVKEYPDLLKQVKSSD 281
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE-GREVAKKK 128
I++ +VR+ G YKGDLA V ++ V K++PR+D E G+ + K
Sbjct: 282 IEIVPGIYVRITRGKYKGDLAIVENLSENGLDVLCKVVPRLDYGKNDEFTEDGKRI--KS 339
Query: 129 PFVPPPRFMNVDEAR-----ELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
PPPR N +A+ L R RR DY +DGFLYK ++ I
Sbjct: 340 TIRPPPRLFNAQDAKMYDPSNLQQRSSRRYTYKGDDY---------EDGFLYKDFKLQYI 390
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRK------KGHFMKGDAVIVIKGDL 237
+++ PT EL+ F+T ++ D+A ++ N+K F GD V V +G+
Sbjct: 391 QTKDVHPTLAELDLFQTGKDSDGIDLAKIAASLKNKKLNDGKQSTAFQPGDKVEVRRGEQ 450
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPK----TLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
G V + + I G PK L V + +L K F G+HV++V G T
Sbjct: 451 AKTVGLVVETALNEIKITVTDSGDPKFVNQKLTVPANDLRKIFNEGDHVRIVEGKHFDET 510
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGI-TKIGDYELRDLVLLDNNSFG 352
G+V+K++ +I++SD TKED+RVFA+ +V++++ ++ + K Y+++DLV L ++ G
Sbjct: 511 GLVIKIDGDSVILVSDQTKEDVRVFANFLVKATDASSNVDNKNFKYDIKDLVELSASTVG 570
Query: 353 VIIRVESEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRI 408
VI++ E +++L + + +P K+ + + ++ D+N T+ V D V+
Sbjct: 571 VIVKAEKNIYEILTTDGRLINVKPTAIASKVTQTR----REQIATDKNGFTIRVGDTVKE 626
Query: 409 VEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAK--SSSCVVVGGSRANGDRNGDAY 466
G KG++G + HIY+ LFI +E+ G + S + S + D
Sbjct: 627 SVGD-KGREGAILHIYKNALFIKSNEIIENLGIFVTNRMNVSTIATKDSMISKSLGPDLT 685
Query: 467 SRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVV 526
S +L+ P ++ G + R G D L+ V ++ G YKG +G+VV
Sbjct: 686 SMNPNLKLPDQL-----------AIQGLKTR--VHGRDKLLYKDVAIKSGSYKGLKGKVV 732
Query: 527 DVKGQSVRVELESQ 540
+ R+EL ++
Sbjct: 733 EADDVYARIELHTK 746
>gi|449298791|gb|EMC94806.1| hypothetical protein BAUCODRAFT_132609 [Baudoinia compniacensis
UAMH 10762]
Length = 1028
Score = 205 bits (522), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 163/559 (29%), Positives = 280/559 (50%), Gaps = 56/559 (10%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+ +Y+EA++ V AC+G+ ++ S K M+VP+ +M +L + K L +VR+
Sbjct: 281 MAGMLYVEANRAEEVIAACEGINFVFMSHKPMMVPVGDMPALLKTQ-KEKQLEPGMYVRV 339
Query: 81 KIGNYKGDLAKVVDVDNVRQRVTVKLIPRID----------LQALANKLEGREVAKKKPF 130
+ G Y GDLA+V DV+ VTV+L+PR+D ++ + + R+ K +
Sbjct: 340 RRGLYMGDLAQVHDVEANSTDVTVRLVPRLDYGLNEDVNAPVEEILPNGQKRKRTKAQVQ 399
Query: 131 VPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQP 190
PPPR + EAR+ H + R+ ++G+ + + DGFL ++ + ++ +++ P
Sbjct: 400 RPPPRLFSEIEARKKHAKYLSRQGNLSGNTW-TYQNKEYVDGFLIESFRLGALQIEDVNP 458
Query: 191 TFDELEKFRTP-GENGESDIASLSTLFANRKK--GHFMKGDAVIVIKGDLKNLKGWVEKV 247
T +E+ F T GE+G ++ + +K G F+ GD V + +G+ K + G +V
Sbjct: 459 TLEEVTHFATSSGEDGGENLDLAALAATLKKSSAGEFLPGDRVELFRGEQKGVTGESVQV 518
Query: 248 DEENVHIR--PEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHV 303
V I+ P L K + + L K F G+HVKV+ G++ GMV++++
Sbjct: 519 YNNIVKIQVDPGFGSLSGKVIEASIDTLRKMFREGDHVKVIGGSKYVDEVGMVVRMKDDR 578
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQ 363
+ IL+D +++I VF+ D+ +++ + G Y+L DLV LD + G+++RV+ E+ +
Sbjct: 579 VTILTDAEQKEITVFSRDLRVATD-SGGAAMDSKYDLFDLVQLDAATVGIVVRVDRESLR 637
Query: 364 VLKGVPDRPEVALVKL-REIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPV 420
VL D+ +A L I KLEK+ DR+ N + + D ++ G + K G V
Sbjct: 638 VL----DQNGMAKTLLPSAIANKLEKRRTAVATDRDGNEMKMDDTIKEYSG--EQKTGRV 691
Query: 421 EHIYRGILFIHDRHHLEHAGFICAKSSSCVVV---GGSRANG----DRNGDAYSRFNSLR 473
H+ +F +R E+AG + S+ +VV GG AN + A + N
Sbjct: 692 LHLRGNSVFAQNRERTENAGIWVGRHSNVLVVAAKGGKPANAGVDLTKMNPALGKPNGGA 751
Query: 474 TPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSV 533
+P PQS GR D L+G TVK+R GP KG G V D +
Sbjct: 752 SPMPPPQSKGR-------------------DRLIGKTVKIRSGPNKGMIGIVKDAGAEEA 792
Query: 534 RVELESQMKVVTVDRSMIS 552
+VEL ++ K + V + M++
Sbjct: 793 KVELHAKNKTIPVKKDMLA 811
>gi|344303242|gb|EGW33516.1| hypothetical protein SPAPADRAFT_137836 [Spathaspora passalidarum
NRRL Y-27907]
Length = 941
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 203/754 (26%), Positives = 328/754 (43%), Gaps = 101/754 (13%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVESKA 69
L I +V D + YIYIEA + + +A G+ N+Y + +LVP++E D+L V+S
Sbjct: 234 LDILTVFQRDAFRGYIYIEAKRPDAIDKALSGMVNVYIRDKLLVPVKEYPDLLKQVKSTD 293
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKP 129
++L +VR+ G YKGDLA V ++ V KL+PR+D ++ + +
Sbjct: 294 VELVPGIYVRITRGKYKGDLAIVDNLSENGLDVRCKLVPRLDY-GRNDEFDQNGKRIRSK 352
Query: 130 FVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQ 189
P PR + EA+ R Y + + DGFLYK ++ + +++
Sbjct: 353 VRPMPRLFSEQEAKMYDNEGLVHRSSRNYLYRND----EYIDGFLYKDFKLQFVQTKDVH 408
Query: 190 PTFDELEKFRTPGENGESDIASLSTLFANRKKGH------FMKGDAVIVIKGDLKNLKGW 243
PT +EL++F+T E D+A+++ N+ + F GD V + +G+ G
Sbjct: 409 PTLEELDRFQTGNEEDGLDLAAIAASLKNKNQADGKQSTAFQPGDKVEIRRGEQAKTVGI 468
Query: 244 VEKVDEENVHIRPEMKGLPK----TLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
V + + I G PK L V +L K F G+HV++V G TG+V+K+
Sbjct: 469 VLEASLNEIVITVTDSGDPKFVNQRLTVPPNDLRKIFNEGDHVRIVEGKHFDETGLVIKI 528
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGD-YELRDLVLLDNNSFGVIIRVE 358
+ ++++SD T+ED+RVFA+ +V++++ +T Y+++DLV L+ ++ GVI++ E
Sbjct: 529 DGDSVVLVSDQTREDVRVFANYLVKATDASTNADSANSMYDIKDLVELNASTVGVIVKAE 588
Query: 359 SEAFQVLKGVPDRPEVALVKLR----EIKCKLEKKSNV-QDRNKNTVAVKDVVRIVEGPC 413
F++L + L+ +R K KL ++ V DRN T+ V D VR G
Sbjct: 589 KNIFEILT-----SDGRLLNVRPSGIASKLKLSRREQVATDRNGLTIKVGDTVRESLGDK 643
Query: 414 KGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN-GDAYSRFN-S 471
K ++G + HIY+ LFI +E+ G + + + +N G S N +
Sbjct: 644 K-REGVILHIYKNSLFIKSNEIIENLGIFVTNRMNVNTITTKDSIMSKNLGPDLSSMNPN 702
Query: 472 LRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
L+ P G + GG D L+ V V G YKG +G+V +
Sbjct: 703 LKLPNPAASVTGFKTH------------VGGRDKLLYKDVAVTSGSYKGLKGKVTETDDI 750
Query: 532 SVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRD 591
R+EL ++ K + V ++ + NV++ R PY +R
Sbjct: 751 YARIELHTKSKKIKVPKNNL--NVLI---------------------RGEAVPY---LRF 784
Query: 592 AGATPIHDGMRTP-----------MRDRAWNPYTPMSPPRDNWEDGNPGSW--GTSPQYQ 638
GA+P + P AWN + W G SW G +P Y
Sbjct: 785 IGASPAQQQQQQPGGYNKPKAPAFSSGSAWNGGGAATGAGSTW-GGGASSWQGGKTPSYG 843
Query: 639 PGSP--------------PSRAYEAPTPGSGW-ASTPGGNYSDAGTPRDSSSTYVNAPSP 683
S + P S W AST G+ S G S+ST+ A
Sbjct: 844 SASTWGGAPGGGSGGGASAWSGGKTPGSNSAWGASTGAGDNSTWGGSGGSNSTWGGARKG 903
Query: 684 YLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGG 717
ST G N + + G GG T G+GG
Sbjct: 904 N-NSTWGAGADKGNGSKW--GGNGGNS-TWGSGG 933
>gi|326470197|gb|EGD94206.1| hypothetical protein TESG_01728 [Trichophyton tonsurans CBS 112818]
Length = 1080
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 182/638 (28%), Positives = 309/638 (48%), Gaps = 54/638 (8%)
Query: 8 GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVL 63
GS I+ + A + + YIY+E K+A + +A G+ NIY K+ L+ ++EM D+L
Sbjct: 263 GSRNPIKIISAFERGGTMAGYIYVEVRKQADIIDALDGMSNIYVRSKMTLISVKEMPDLL 322
Query: 64 AVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI------DLQALAN 117
V+ K+ +L+ W R+ Y+GDLA++ VTV+L+PR+ D A A
Sbjct: 323 RVK-KSEELTPGGWFRIMRVRYQGDLAQLKKSRQNGLNVTVRLVPRLEYGLNEDSNAPAL 381
Query: 118 KLEGREVAKKKPFV--PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLY 175
+ + + + PP R + EA++ H + + G + +G + DGFL
Sbjct: 382 DPKRKRIGGGSSAIARPPQRLFSEAEAKKRHSKYLSATSSLGGKSWSYLGDT-YVDGFLI 440
Query: 176 KTVSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANR-KKGHFMKGDAVIV 232
K + ++ + +N+ P DE+ KF ++G S D+ASL+ N ++ ++ GD V V
Sbjct: 441 KNMKVQHLITKNVNPQLDEVTKFARGADDGTSNLDLASLAATIKNTTEEDAYLVGDTVEV 500
Query: 233 IKGDLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ 289
G+ + + G + V I+ E++G + + V +K L K F G+HVKV+ G++
Sbjct: 501 FAGEQRGVVGQTVATRGDIVTIKVTQGELQG--QHIDVPTKGLRKRFSEGDHVKVIGGSK 558
Query: 290 -AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGIT-KIGDYELRDLVLLD 347
GMV++++ + IL+D T ++I VF+ D+ E+ ++ G+ K+G Y++ DLV +D
Sbjct: 559 YRDELGMVVRIKDDRVTILTDMTMQEITVFSKDLREADDI--GVDGKLGQYDVHDLVQID 616
Query: 348 NNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDV 405
+ G +++++ E+ +V+ +V + K+E++ + DRN + + D
Sbjct: 617 QTTVGCVVKLDRESMRVID---QNGSTQIVLPSRVLGKIEQRRHAVTTDRNGSEIKCGDT 673
Query: 406 VRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDA 465
V+ V G + + G + HI+R LF + ++AG + ++ + V S + R+
Sbjct: 674 VKEVTG--EQRTGTILHIHRAFLFCTSKVVGDNAGIMVTRAINVTTVATSGSKLGRSAPD 731
Query: 466 YSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRV 525
S+ N P + Q G G PP G D LVG TV +R GP+KG G V
Sbjct: 732 LSKMN-----PAL-QKNGMNGSGMPPPR------TFGRDRLVGKTVHIRRGPFKGLLGIV 779
Query: 526 VDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRY-GMGSETPMHPSR--TPL 582
D RVEL S KVV V++ +S ++ D R+ G G P P T
Sbjct: 780 KDTTDIIARVELHSVSKVVPVEKENLSVKDPITGQPVDINRFGGRGGGAPRVPQSMATGR 839
Query: 583 HPYMTPMRDAGATPIH--DGMRTPMRDRAWNPYTPMSP 618
G TPI D RTP AW + +P
Sbjct: 840 AGPQDAAWQGGRTPIAMGDSSRTP----AWRASSSRTP 873
>gi|320593338|gb|EFX05747.1| transcription initiation protein spt5 [Grosmannia clavigera kw1407]
Length = 1090
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 276/552 (50%), Gaps = 49/552 (8%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQK-VMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA ++ + A G+ N+Y + ++LV I++M D+ + +K L WVR+
Sbjct: 286 MKGYIYVEALRQTDIMTALDGMLNVYPRNNLILVEIKDMPDLFRI-TKTPTLEPGAWVRL 344
Query: 81 KIG-NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGREVAKKKPFV--- 131
+ Y GDLA+V+DV V+ IPR+D L EG+ K+ P V
Sbjct: 345 RRPVKYSGDLAQVMDVTENGLEARVRYIPRLDYGVRDESLALMTAEGKR--KRVPGVAGP 402
Query: 132 -PPPRFMNVDEARELHIR-VERRRDPMT----GDYFENIGGMLFKDGFLYKTVSMKSISA 185
PP R + EAR+ + R + P T GDYFEN GFL K + ++ +
Sbjct: 403 RPPQRLFSEAEARKRNPRNMMAHAQPNTWTFNGDYFEN--------GFLVKDIKLQQLVV 454
Query: 186 QNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH----FMKGDAVIVIKGDLKNLK 241
+++ PT +E+ KF E+G ++ L L A+ K + ++ GD V V +G+ K +
Sbjct: 455 KDVNPTLEEVTKFALGAEDGTENL-DLKALAASLKDSNANVTYVPGDVVEVYEGEQKGVV 513
Query: 242 GWVEKVDEENVHI---RPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
G + + V I +++G +T+ +K L K F G+HV+V+ G GMV+K
Sbjct: 514 GKAVSIVGDIVTIDVTEGDLRG--QTIEAPTKGLRKRFRAGDHVRVIGGRFRDDVGMVVK 571
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
+E+ + +L+D +I VF+ DV E+S+ T G +G + L DLV LD ++ G I++++
Sbjct: 572 IEEDRVTLLTDQNNSEITVFSKDVREASD-TGGQGTLGQFSLLDLVQLDLSTVGCIVKID 630
Query: 359 SEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
E+ VL D +V ++ K K + D + + + + DVV+ E + +QG
Sbjct: 631 RESLVVLDQNGDTRQVMPSQISN-KLPKNKMAVAADHSGSEIRLDDVVK--EQGGQRRQG 687
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT-PPR 477
+ HI+R +F+H E+AG ++S+ V A G R A S L + P
Sbjct: 688 KIIHIHRSFVFMHSNATTENAGVFVTRASNVNTVA---AKGGRVSAAASAGPDLDSMNPA 744
Query: 478 IPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVEL 537
+ ++PG + A R G D VG TV VR G YKG G V D RVEL
Sbjct: 745 LKRNPGGANGNAMQAPQRVF----GRDRAVGQTVTVRRGGYKGLLGIVKDTTDTLARVEL 800
Query: 538 ESQMKVVTVDRS 549
++ K +TV ++
Sbjct: 801 HTKSKTITVPKA 812
>gi|448096881|ref|XP_004198538.1| Piso0_001914 [Millerozyma farinosa CBS 7064]
gi|359379960|emb|CCE82201.1| Piso0_001914 [Millerozyma farinosa CBS 7064]
Length = 1049
Score = 203 bits (517), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 169/575 (29%), Positives = 283/575 (49%), Gaps = 52/575 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVESKA 69
L+I +V D + YIYIEA K ++ A G+ N+Y+++ +LVP+RE D+L V+S
Sbjct: 347 LEILTVFQRDSFRGYIYIEAKKPEAIERALAGMVNVYAKQRLLVPVREYPDLLKQVKSSD 406
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-QALANKLEGREVAKKK 128
+++ +VR+ G YK DLA V ++ V KL+PR+D + +G+ + K
Sbjct: 407 VEIVPGIYVRITRGKYKNDLAIVDNLSENGLDVRCKLVPRLDYGKNDEFDKDGKRIKSKA 466
Query: 129 PFVPPPRFMNVDEARELHI--RVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQ 186
P PR N EA+ +H ++ R P + Y G + DGFLYK ++ I +
Sbjct: 467 R--PIPRLFNESEAK-MHDPEHLQHGRGPRSFIYR----GEEYIDGFLYKDFKLQFIQTK 519
Query: 187 NIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-------FMKGDAVIVIKGDLKN 239
++ P +EL++F+ N E D L+ + A+ K + F GD V V +G+
Sbjct: 520 DVHPRLEELDRFQAG--NTEDDGLDLTAIAASLKNKNLDSNSTSFQPGDKVEVRRGEQAR 577
Query: 240 LKGWVEKVDEENVHIRPEMKG----LPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
G V + V + G + + L V + +L K F G+HV+V G TG+
Sbjct: 578 TVGKVIGISLNEVTLNITDSGDSRLVNQHLTVPASDLRKVFAAGDHVRVTDGKHVDETGL 637
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGD-YELRDLVLLDNNSFGVI 354
V+K+E +++LSD T++DIRVFA+ ++++++ ++ G+ ++++DLV L+ ++ GVI
Sbjct: 638 VIKIENDSVVLLSDQTQQDIRVFANYLIKATDASSNANASGNKFDIKDLVKLNASTVGVI 697
Query: 355 IRVESEAFQVLKGVPDRPEVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEG 411
+ E +AF++ + VK I KL+ ++ D+N V + D V+ G
Sbjct: 698 VEAEKDAFKL---ITSEGRTITVKPSGIASKLDLGRREQVATDKNGLPVKIGDTVKETLG 754
Query: 412 PCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAK--SSSCVVVGGSRANGDRNGDAYSRF 469
K ++G + HIY+ LFI LE+ G + S + GS + + D
Sbjct: 755 DKK-REGVIIHIYKTSLFIKSNDILENLGIFVTNCMNVSTITTKGSIVSKNLGPD----L 809
Query: 470 NSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK 529
N + ++P P A + G D L+ V V G YKG G+V D
Sbjct: 810 NRMNPNLKLPN---------PIATTGLKTKIGNRDRLLNHDVIVNSGNYKGLMGKVRDAD 860
Query: 530 GQSVRVELESQMKVVTVDRSMISDNVVV---STPY 561
R+EL S+ K + V ++ + NV+V S PY
Sbjct: 861 DTFARIELHSKSKTIKVSKNSL--NVLVRGESVPY 893
>gi|389634731|ref|XP_003715018.1| transcription elongation factor spt-5 [Magnaporthe oryzae 70-15]
gi|351647351|gb|EHA55211.1| transcription elongation factor spt-5 [Magnaporthe oryzae 70-15]
gi|440470527|gb|ELQ39594.1| transcription elongation factor spt-5 [Magnaporthe oryzae Y34]
gi|440488508|gb|ELQ68233.1| transcription elongation factor spt-5 [Magnaporthe oryzae P131]
Length = 1026
Score = 202 bits (515), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 216/752 (28%), Positives = 336/752 (44%), Gaps = 116/752 (15%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K Y+Y+EA++ + A GL N+Y + K++LV I++M D+L V+ K +L VR+
Sbjct: 251 MKGYVYVEANRSTDIMVALDGLLNVYPRTKMLLVEIKDMPDLLRVQ-KTPELKVGDHVRL 309
Query: 81 KIG-NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVP----PPR 135
K Y GDLA V +V V V +PR+D + E K+K F P P R
Sbjct: 310 KRPPRYAGDLAVVRNVTENGLEVQVAFLPRLDYGQRDDAFTKTEDGKRKRFAPGPRPPQR 369
Query: 136 FMNVDEARELHIRV-ERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDE 194
N EAR+ R+ +P DY G F++G L + ++ + +++ T E
Sbjct: 370 PFNESEARKHDARLLSGSLEPGVFDYM----GDHFENGLLIRDYKIQQLQTKDVVATPSE 425
Query: 195 LEKFRTPGENGES--DIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
+ F ++G D+ L++ + ++ GD++ V G+ K + G V V
Sbjct: 426 IMLFAQVAQDGTEHLDLTPLASSLEDTNV-TYLPGDSIEVYDGEQKGVVGKAVNVQGGVV 484
Query: 253 HIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTT 311
++ L + + V +K L K F G+HVKVV G+ G GMV++VE++ + I++D T
Sbjct: 485 TLKVTEGDLAGQVIEVPTKGLRKRFRIGDHVKVVGGSNKGEVGMVVQVEENRVSIVTDQT 544
Query: 312 KEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDR 371
K + VF+ D+ E+S+ + G IG Y L+DLV LD + I++++ E VL D
Sbjct: 545 KATLTVFSKDLREASD-SGGQGSIGQYSLQDLVQLDVTTVACILKIDGENLTVLDQNGDS 603
Query: 372 PEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIH 431
+V + ++ + +K + DRN V + DVV+ + G + +QG + HI+RG ++
Sbjct: 604 RQVPVSQIAN-RIPPKKLAVAADRNGAEVRLDDVVKEIVG--QRRQGKIIHIHRGYCYLQ 660
Query: 432 DRHHLEHAGFICAKSSSCVVVG--GSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGG 489
E++G ++S+ V G RAN + D + +L+ P Q+P
Sbjct: 661 SDSVKENSGIFVTRASNVTTVAAKGGRANNNSLPDLTAMNPALKRNPSGMQAPQPK---- 716
Query: 490 PPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS 549
P GR+R +G TV VR G YKG G V D RVEL ++ K++ V ++
Sbjct: 717 -PQLGRDRA--------LGQTVSVRRGGYKGLLGIVKDTTETHARVELHTKNKIIMVPKA 767
Query: 550 --MISDNVV----------------------------VSTPYRD-TPR--YGMGSETPMH 576
+ D V ST Y TP G G TP
Sbjct: 768 DLVFKDKVTGRPIDIFSRGGMGGRGGGNAGNRGGGFGGSTSYGGRTPAGDGGRGGRTPAW 827
Query: 577 PSRTPLHPYMTPMRDAGATPI------------HDGMRTPM----RDRAWNPYTPMSPPR 620
S + P + G TP +DG RT R AW + P
Sbjct: 828 ESSSSRTPAWSRADAGGRTPAWPSADGSRTVNPYDGSRTAYGSGSRTPAWMSGSKTPAPH 887
Query: 621 DNWED---------------------GNPGSWGTSPQYQPG-SPPSRAYEAPTPGSGW-A 657
D++ N +WG Y PG S S AY+APTPG+G A
Sbjct: 888 DSFSSNSAWSSGAKTPYGASAPTPAASNNDTWG----YTPGPSGSSNAYDAPTPGAGLGA 943
Query: 658 STPGGNYSDAGTPRDSSS---TYVNAPSPYLP 686
TPG DA TP S+ ++AP+P P
Sbjct: 944 PTPGA--LDAPTPGAYSAPTPGAMSAPTPAAP 973
>gi|367005769|ref|XP_003687616.1| hypothetical protein TPHA_0K00480 [Tetrapisispora phaffii CBS 4417]
gi|357525921|emb|CCE65182.1| hypothetical protein TPHA_0K00480 [Tetrapisispora phaffii CBS 4417]
Length = 993
Score = 202 bits (513), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 157/561 (27%), Positives = 283/561 (50%), Gaps = 53/561 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ K IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 260 KLKILSIFERDNFKGRIYIEAPKQSVIEKFCNGVPDIYVSQKILIPVQELPLLLKPTKSD 319
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ L +VR+K G YKGDLA V + V +K++PR+D + + + A+
Sbjct: 320 DVTLEEGNYVRIKRGIYKGDLAIVDQISENNLEVMLKIVPRLDYGKYDEIDPITQQRKAR 379
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+ + PP + N +D+A L+ R +R DY DG+LYK+
Sbjct: 380 RATYANRPPSQLFNPTLALRLDQA-NLYKRDDRHFTYKNEDYV---------DGYLYKSY 429
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH--FMKGDAVIVIKGD 236
++ + +NIQPT +EL +F + ++G D+A++S + + F GD V ++ G+
Sbjct: 430 RIQHVETKNIQPTVEELARFGS--KDGSIDLATISQTIKKAQVANIIFHPGDRVEILNGE 487
Query: 237 LKNLKGWVEKVDEENVHIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
+ KG + K + +R PE++ P V++ L K F+PG+HV VV+G G G+
Sbjct: 488 QRGSKGIIIKTTTDIATVRLPEIQLKPLEFPVST--LRKIFQPGDHVTVVNGDHQGDAGL 545
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
VL ++Q + +S+ T+E+I + A+++ +S + T + +Y L D++ L + II
Sbjct: 546 VLAIKQGQVTFMSNQTREEITITANNLTKSMDSTPTSS---EYSLHDIIELSAKTVACII 602
Query: 356 RVESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEG 411
+ + F++ + + +V+ + L ++ + S V D+ N + + D IVE
Sbjct: 603 QAGHDLFKI---IDETGKVSTITKGSILSKVNVARARVSTVDDKG-NEIKIGDT--IVEV 656
Query: 412 PCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNS 471
++G V +I +F + +E+AG S+ V ++ D N
Sbjct: 657 IGARREGQVLYIQNQQIFAMSKKIIENAGVFVVSPSNVEAV----SSKDNMLGGSIDLNK 712
Query: 472 LRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
L +P S+ GPP + + RGG D +G TV++R YKG G V DV G
Sbjct: 713 L--------NPEVISKMGPPPVAKAQQSRGGRDVALGKTVRIRSAGYKGQLGIVKDVNGD 764
Query: 532 SVRVELESQMKVVTVDRSMIS 552
+ +EL S+ K +TVD+ ++
Sbjct: 765 TATIELHSKNKNITVDKKKLT 785
>gi|156387914|ref|XP_001634447.1| predicted protein [Nematostella vectensis]
gi|156221530|gb|EDO42384.1| predicted protein [Nematostella vectensis]
Length = 512
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/344 (37%), Positives = 203/344 (59%), Gaps = 17/344 (4%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+S IA++ LK YIYIEA K+ HVK+A +G + + QK +VPI EMTDVL V
Sbjct: 179 LQIKSAIAVEGLKGYIYIEAFKQTHVKQAIEGFGTLRLGKWQQK--MVPITEMTDVLKVV 236
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL---QALANKLEGRE 123
+ + + WVR+K G YK DLA+V V+ R +VT+K+IPRID + + E E
Sbjct: 237 KEVVTVKPKQWVRLKRGIYKDDLAQVDYVNTARNQVTLKMIPRIDYARTRGIPKSAEDPE 296
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
K+K PP + + D R + + + GD+ GG ++ GFLYKT++M +I
Sbjct: 297 KRKRKR-KPPQKLFDADSVRSVGGDISQ-----DGDFMLFEGGR-YRGGFLYKTLAMSAI 349
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGW 243
+ I+PT ELE+F E+ E ++ S+ ++ + F GDAV VI+G+LKNL+G
Sbjct: 350 VTEGIKPTLQELERFEAAPEDVELELPVKSSKDSDEVQHTFAVGDAVEVIEGELKNLRGK 409
Query: 244 VEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHV 303
+ V+ E + I P + L L + EL K+F+ G+HVKV+ G G TG++++VE HV
Sbjct: 410 IISVEGEKITIMPNHEDLKDALDFPAHELGKHFKMGDHVKVIGGRYEGDTGLIVRVEDHV 469
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLD 347
++ SD T +++V D+ S+ ++G+ +G ++ D+V L+
Sbjct: 470 -VLFSDLTMHELKVLPKDLQLCSDRSSGVDSMGQHQFGDMVQLE 512
>gi|380016442|ref|XP_003692194.1| PREDICTED: transcription elongation factor SPT5-like isoform 3 [Apis
florea]
Length = 1014
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 251/512 (49%), Gaps = 58/512 (11%)
Query: 366 KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYR 425
K + RP+ L K RE + + D +NT+ KD+V++V+GP G+ G ++H+YR
Sbjct: 520 KVIEARPQ-GLTKRRE-----NRNAVALDSQQNTIQKKDIVKVVDGPHAGRGGEIKHLYR 573
Query: 426 GILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRY 485
F+H R +++ G K+ + GG+++N + + F S PRI SP
Sbjct: 574 SFAFLHSRMFVDNGGIFVCKTRHLQLSGGNKSN-ISSMSPMTGFMS----PRI-ASPMHP 627
Query: 486 SRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVT 545
S GG G GG L+GTT+K+ GPYKG G V D + RVEL S + ++
Sbjct: 628 SGGGGGRGRGRGGGARRDRELIGTTIKITGGPYKGNVGIVKDAIDTTARVELHSTCQTIS 687
Query: 546 VDRSMISDNVVVS-----TPYRDTPRYGMGSETPMHP---SRTPLHPYMTPMRDAGA--- 594
VDRS I++ V++ + Y TP YG G +TPM+ S+TP+H TPM + G+
Sbjct: 688 VDRSHIANVAVLTKDGGFSSYNRTPAYG-GGQTPMYARDGSKTPMHGSQTPMYENGSRTP 746
Query: 595 -----TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEA 649
TP HDG RTP + AW+P +P R N DG G SP Y PG PP+
Sbjct: 747 HYGSMTPSHDGSRTPGQSGAWDPAVTNTPARTNDFDGYSMEEGGSPGYAPGYPPTGGPFT 806
Query: 650 P-TPGSGWAS-------TPGGNYSDAGTPRDSSSTYVNAPSPY---LPSTPGGQPMTPNS 698
P TPG+ + S P + + + T S + YV PSP ++P G TP+
Sbjct: 807 PQTPGTMYGSEQSFSSYQPSPSPAGSATASPSPAGYVATPSPSGTGYTTSPHGAFATPSP 866
Query: 699 ASYLPGTPG--GQPMTPGT--GGLDA--MSPVIGADNEGPWFMPDILVR-RSGEESVV-- 749
Y P TPG G P P T GLD + VIG W DI VR R +
Sbjct: 867 MGYSPMTPGVAGSPYNPQTPGAGLDTGVGAGVIGGTE---WHTTDIEVRIRDSHQDPALA 923
Query: 750 ---GVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKL 806
GVIR + G C V L + + E+E V P + D++K++ G R A G L
Sbjct: 924 GQQGVIRGISVSGMCAVFLPVEDR--VVNLVCEELEPVVPSRGDRVKVIIGEDREAVGTL 981
Query: 807 IGVDGTDGIVKVDVSLDVKILDMAILAKLAQP 838
+ +D +G+VK++ +VK+L + L K+ P
Sbjct: 982 LSIDNQEGVVKLNKD-EVKMLHLRFLCKMKAP 1012
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 164/334 (49%), Gaps = 39/334 (11%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--QKVMLVPIREMTDVLAVESK 68
LQI+SV+A + +K YIYIEA K+ HVK A + + N+ K +VPI+EMTDVL V +
Sbjct: 269 LQIKSVVAPEGVKGYIYIEAYKQPHVKAAIENVGNLRMGIWKQQMVPIKEMTDVLRVVKE 328
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
L WVR+K G YK D+A+V VD + +V +KL+PRID L E
Sbjct: 329 QTGLKAKQWVRLKRGIYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRPRGALRTAQSESEA 388
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+ +KK P + + + R + V GD+ G + GFLYK + +I
Sbjct: 389 LKRKKKRRPAAKPFDPEAIRAIGGEVTS-----DGDFLIFEGNRYSRKGFLYKNFTTSAI 443
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKK------GHFMKGDAVIVIKGDL 237
A+ ++PT ELE+F E E D++ A+ K F GD V V +G+L
Sbjct: 444 IAEGVKPTLSELERFEEAPEGVELDLSGAPGTGASGNKEDSAVTHSFSTGDNVEVCEGEL 503
Query: 238 KNLKGWVEKVD----EENVHIRPEMKGLPK------TLAVNSKELCKYFEPGNHVKVVSG 287
NL+G + +D + + RP+ GL K +A++S++ + + VKVV G
Sbjct: 504 INLQGKIVSIDGTMHGKVIEARPQ--GLTKRRENRNAVALDSQQ--NTIQKKDIVKVVDG 559
Query: 288 TQAGATGMVLKVEQHVLIILSDTTKEDIRVFADD 321
AG G + + + + S R+F D+
Sbjct: 560 PHAGRGGEIKHLYRSFAFLHS-------RMFVDN 586
>gi|322706040|gb|EFY97622.1| transcription initiation protein spt5 [Metarhizium anisopliae ARSEF
23]
Length = 1048
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 220/791 (27%), Positives = 350/791 (44%), Gaps = 124/791 (15%)
Query: 1 MQKCIDKGSELQIRSVI----ALDHLKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVP 55
+++ I EL I + A +K +IY+EA ++ + A G+ N+Y + K+ LV
Sbjct: 232 IEERIGTKDELAITAAFERGGAQSVMKGFIYVEAQRQTDILVALDGMLNVYPRSKMTLVD 291
Query: 56 IREMTDVLAVESKAIDLSRDTWVRMKI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-- 112
I++M ++L V +K L WVR++ + GDLA+V+DV V+ IPR+D
Sbjct: 292 IKDMPELLRV-TKTPTLEPGAWVRLRRPAKHGGDLAQVLDVTENGLEARVRFIPRLDYGM 350
Query: 113 --QALANKLEGREVAKKKPFV----PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGG 166
+AL++ + +K+P PP R + EAR+ H R + +P T + + G
Sbjct: 351 RDEALSST--SSDGKRKRPGAAGPRPPQRLFSEIEARKRHPRY-IQGNPSTNTW--SYMG 405
Query: 167 MLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH--- 223
F++GF K V ++ + ++ P+ +E+ +F + E+G ++ L L A+ K +
Sbjct: 406 DEFENGFQVKDVKIQQLVVTDVNPSLEEVTRFASGAEDGTENL-DLKALAASLKDSNTLV 464
Query: 224 -FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNH 281
++ GD + V G+ K + G V + V + L +T+ V K L K F+ G+H
Sbjct: 465 TYLPGDIIEVYSGEQKGVVGKATNVQGDIVTMSVTEGDLEGQTIEVPIKGLRKRFKIGDH 524
Query: 282 VKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYEL 340
VKV+ G++ G V+K+ + + +L+D T ++ VF+ D+ E+S++ G +G + L
Sbjct: 525 VKVIGGSKFRDEVGTVVKISEDRVTLLTDQTNTEVTVFSKDLREASDIG-GQGSLGQFSL 583
Query: 341 RDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTV 400
DLV LD + G I++++ E+ VL D ++ ++ K K++ DR + +
Sbjct: 584 HDLVQLDPTTVGCIVKIDRESLVVLDQYGDTRQLMPSQISN-KLPKRKQAVAADREGSEI 642
Query: 401 AVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSS--SCVVVGGSRAN 458
+ DVV+ G + +QG + HI+R +F+H E+AG KSS + V G R N
Sbjct: 643 RLDDVVKEFTG--QHRQGKIIHIHRSYVFLHTNDSNENAGVFVTKSSMVNTVAAKGGRVN 700
Query: 459 GDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPY 518
+G S N P G S+ P G D + T ++ GPY
Sbjct: 701 AASSGPDLSAMN----PALKIHKNGGNSKPSQPVK------MFGRDRAINQTAIIKKGPY 750
Query: 519 KGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS--DNVVVST----------------- 559
KG G V D RVEL ++ K +TV R +S D +T
Sbjct: 751 KGLLGIVKDTTDTHARVELHTKGKTITVPRDSLSFKDKTTGATIDINGRGRGAPGGGFAR 810
Query: 560 -PYRDTPRYGMGSETPM---HPSRTPLHPYMTPMRDAGATPI-----HDGMRTPMR---D 607
P + GS TP+ R P TP G TP + G RTP
Sbjct: 811 GGGDKIPGWQGGSRTPIGTGSSDRVPAWGSRTPAA-GGRTPAWKAQDYSGSRTPAWADGS 869
Query: 608 RAWNPY------------TPMSPPRDNWEDGNP--------GSWGTSPQYQPGSP----- 642
R NPY TP W+ G G+ +P Y G
Sbjct: 870 RTVNPYDGSRTAYGSGSRTPA------WQSGARTPAVGDAFGAGSRTPAYAGGGADGWAS 923
Query: 643 ----PSRAYEAPTPGS----GWASTPG---GNYSDAGTPRDS----SSTYVNAPSP--YL 685
P+ APTPG+ W TPG G Y DA TP + + +NAP+P Y
Sbjct: 924 GSKTPAWGASAPTPGASGNDSWGYTPGATTGAY-DAPTPGAAIGAPTPGAMNAPTPGAYS 982
Query: 686 PSTPGGQPMTP 696
TP TP
Sbjct: 983 APTPAASAPTP 993
>gi|342888249|gb|EGU87614.1| hypothetical protein FOXB_01899 [Fusarium oxysporum Fo5176]
Length = 1048
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 216/803 (26%), Positives = 342/803 (42%), Gaps = 136/803 (16%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K ++Y+EA ++ + + + N+Y K++LV I++M ++ V SK L WVR+
Sbjct: 262 MKGFVYVEARRQTDILKGLDSMLNVYPHSKMILVDIKDMPELFRV-SKTPTLEPGAWVRL 320
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEG--REVAKKKPF-----VP 132
+ + GDLA+V+DV V+ IPR+D + + +K+PF P
Sbjct: 321 RRPMKHNGDLAQVIDVTENGLEARVRFIPRLDYGMRDDAFSSVTADGKRKRPFGMAGPKP 380
Query: 133 PPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTF 192
P R + EAR+ H R + +P G + G F++GF K + ++ + ++ P+
Sbjct: 381 PQRLFSEVEARKRHPR-HIQGNPTAGTW--TYMGDEFENGFQVKDIKIQQLITTDVNPSL 437
Query: 193 DELEKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDE 249
+E+ +F + E+G ++ A +L + ++ GD V V G+ K + G +V
Sbjct: 438 EEVTRFASGAEDGTENLDLKALAHSLKDSNALATYLPGDIVEVYTGEQKGVVGKAMRVHS 497
Query: 250 ENVHIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIIL 307
+ V I E + + + V + L K F+ G+HVKV+ G++ GMV+ ++ + +L
Sbjct: 498 DVVSITVTEGDLVGQEIDVPIRSLRKRFKIGDHVKVIGGSKFRDEVGMVVNIKDDQVTLL 557
Query: 308 SDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKG 367
+D T ++ VF+ D+ E+S++ G +G Y L DLV LD + G +++V+ E+ VL
Sbjct: 558 TDQTNSEVTVFSKDLREASDIG-GQGSLGQYSLHDLVQLDPTTVGCVVKVDRESLVVLDQ 616
Query: 368 VPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGI 427
D +V ++ K K + DR+ + + ++DVV+ G + +QG + HI+R
Sbjct: 617 FGDTRQVMPSQIAN-KLPKRKTAVAADRSGSEIRLEDVVKEYTG--QQRQGKIIHIHRSY 673
Query: 428 LFIHDRHHLEHAGFICAKSS--SCVVVGGSRANGDRNGDAYSRFN---------SLRTPP 476
+F+H E+AG K+S + V G R G + N + P
Sbjct: 674 VFLHTNDSKENAGVFVTKASMVNTVAAKGGRVAAASAGPDLTAMNPALKLHKNGTENKPV 733
Query: 477 RIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVE 536
+ P+S GR D + TV +R G YKG G V D RVE
Sbjct: 734 QQPRSFGR-------------------DKAIEQTVIIRKGAYKGLLGIVKDTTDTHARVE 774
Query: 537 LESQMKVVTVDRSMISDNVVVSTPYRD----------------------TPRYGMGSETP 574
L ++ K +TV + +S ++ D P + GS TP
Sbjct: 775 LHTKSKTITVPKDSLSFKNKLTGATIDIASRGGRGGYGGGAGRGGGGDRVPGWQGGSRTP 834
Query: 575 MHPS---RTPLHPYMTPMRDAGATPIH-----DGMRTPMR---DRAWNPYTPMSPPRDNW 623
M S R P TP +G TP G RTP R NPY
Sbjct: 835 MAGSSSERVPAWGSRTPAAASGRTPAWKAPDMSGARTPAWADGSRTVNPY---------- 884
Query: 624 EDGNP---GSWGTSPQYQPG------------------------------SPPSRAYEAP 650
DGN GS G +P +Q G P+ AP
Sbjct: 885 -DGNRTAYGSGGRTPAWQAGGRTPAPGDAFGAGSRTPAYGGGGDSWGSGSKTPAWGVSAP 943
Query: 651 TPG-SGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPG-GQPMTPNSASYLPGTPGG 708
TPG SG S G DA TP + AP+P S P G P A+ TPG
Sbjct: 944 TPGASGNDSWGGSGAYDAPTP----GVGLGAPTPGALSAPTPGAYSAPTPAAISAPTPGA 999
Query: 709 QPMTPGTGGLDAMSPVIGADNEG 731
G G A +P GA G
Sbjct: 1000 S-WQGGWGADSAPTPAAGAPTPG 1021
>gi|322699745|gb|EFY91504.1| transcription initiation protein spt5 [Metarhizium acridum CQMa
102]
Length = 1048
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 218/789 (27%), Positives = 347/789 (43%), Gaps = 120/789 (15%)
Query: 1 MQKCIDKGSELQIRSVI----ALDHLKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVP 55
+++ I EL I + A +K +IY+EA ++ + A G+ N+Y + K+ LV
Sbjct: 232 IEERIGTKDELAITAAFERGGAQSVMKGFIYVEAQRQTDILVALDGMLNVYPRSKMTLVD 291
Query: 56 IREMTDVLAVESKAIDLSRDTWVRMKI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQA 114
I++M ++L V +K L WVR++ + GDLA+V+DV V+ IPR+D
Sbjct: 292 IKDMPELLRV-TKTPTLEPGAWVRLRRPAKHGGDLAQVLDVTENGLEARVRFIPRLDYGM 350
Query: 115 LANKLEG--REVAKKKPFV----PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGML 168
L + +K+P PP R + EAR+ H R + +P T + + G
Sbjct: 351 RDEALSSLSSDGKRKRPGAAGPRPPQRLFSEIEARKRHPRY-IQGNPSTNTW--SYMGDE 407
Query: 169 FKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH----F 224
F++GF K V ++ + ++ P+ +E+ +F + E+G ++ L L A+ K + +
Sbjct: 408 FENGFQVKDVKIQQLVVTDVNPSLEEVTRFASGAEDGTENL-DLKALAASLKDSNTLVTY 466
Query: 225 MKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVK 283
+ GD + V G+ K + G V + V + L +T+ V K L K F+ G+HVK
Sbjct: 467 LPGDIIEVYSGEQKGVVGKATNVQGDIVTMSVTEGDLEGQTIEVPIKGLRKRFKIGDHVK 526
Query: 284 VVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRD 342
V+ G++ G V+K+ + + +L+D T ++ VF+ D+ E+S++ G +G + L D
Sbjct: 527 VIGGSKFRDEVGTVVKISEDRVTLLTDQTNTEVTVFSKDLREASDIG-GQGSLGQFSLHD 585
Query: 343 LVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAV 402
LV LD + G I++++ E+ VL D ++ ++ K K++ DR + + +
Sbjct: 586 LVQLDPTTVGCIVKIDRESLVVLDQYGDTRQLMPSQISN-KLPKRKQAVAADREGSEIRL 644
Query: 403 KDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSS--SCVVVGGSRANGD 460
DVV+ G + +QG + HI+R +F+H E+AG KSS + V G R N
Sbjct: 645 DDVVKEFTG--QHRQGKIIHIHRSYVFLHTNDSNENAGVFVTKSSMVNTVAAKGGRVNAA 702
Query: 461 RNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKG 520
+G S N +I ++ G P G D + T ++ GPYKG
Sbjct: 703 SSGPDLSAMNPAL---KIHKNGGNDKPSQPVK-------MFGRDRAINQTAIIKKGPYKG 752
Query: 521 YRGRVVDVKGQSVRVELESQMKVVTVDRSMIS--DNVVVST------------------P 560
G V D RVEL ++ K +TV R +S D +T
Sbjct: 753 LLGIVKDTTDTHARVELHTKGKTITVPRDSLSFKDKTTGATIDINGRGRGAPGGGFARGG 812
Query: 561 YRDTPRYGMGSETPM---HPSRTPLHPYMTPMRDAGATPI-----HDGMRTPMR---DRA 609
P + GS TP+ R P TP G TP + G RTP R
Sbjct: 813 GDKMPGWQGGSRTPIGTGSSDRVPAWGSRTPAA-GGRTPAWKAQDYSGSRTPAWADGSRT 871
Query: 610 WNPY------------TPMSPPRDNWEDGNP--------GSWGTSPQYQPGSP------- 642
NPY TP W+ G G+ +P Y G
Sbjct: 872 VNPYDGSRTAYGSGSRTPA------WQSGARTPALGDAFGAGSRTPAYAGGGADGWASGS 925
Query: 643 --PSRAYEAPTPGS----GWASTPG---GNYSDAGTPRDS----SSTYVNAPSP--YLPS 687
P+ APTPG+ W TPG G Y DA TP + + +NAP+P Y
Sbjct: 926 KTPAWGASAPTPGASGTDSWGYTPGATTGGY-DAPTPGAAIGAPTPGAMNAPTPGAYSAP 984
Query: 688 TPGGQPMTP 696
TP TP
Sbjct: 985 TPAASAPTP 993
>gi|224100723|ref|XP_002311988.1| hypothetical protein POPTRDRAFT_765239 [Populus trichocarpa]
gi|222851808|gb|EEE89355.1| hypothetical protein POPTRDRAFT_765239 [Populus trichocarpa]
Length = 1853
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 101/224 (45%), Positives = 149/224 (66%), Gaps = 4/224 (1%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G++LQI S ++DH+K YIYIEADK+ + EACKGL +IYS ++ VP
Sbjct: 159 MQKFVDLKSLGTKLQIISAFSIDHVKGYIYIEADKQIDIIEACKGLCSIYSSRMAPVPKN 218
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E++ +L++ +S W R+K GNYKGDLA++V V++VR++ TVKLIPRIDLQALA
Sbjct: 219 EVSHLLSIRKSCNQVSEGMWARVKNGNYKGDLAQIVAVNDVRKKATVKLIPRIDLQALAQ 278
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
K G +AKKK +P PR ++ E E ++ RRD TG FE + G++ KDG+LYK
Sbjct: 279 KF-GGGLAKKKAAIPAPRLISSSELEEFRPLIQYRRDRDTGKMFEVLDGLMLKDGYLYKR 337
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKK 221
VS+ S+S ++ P+ +EL KF++ N ++ L+ ++ +KK
Sbjct: 338 VSIDSLSCLSVLPSEEELLKFKSSENNESENLEWLAQIYVGQKK 381
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 76/117 (64%), Gaps = 2/117 (1%)
Query: 338 YELRDLVLLDNNSFGVIIRVE-SEAFQVLKGVPDRPEVALVKLREIKCK-LEKKSNVQDR 395
+EL DLV FG+I+ +E E++++LK P++P+V V LR++K + K D
Sbjct: 405 FELYDLVCFGRKDFGLIVGMEKDESYKILKHGPEKPDVVTVALRDLKNGPTDMKFTALDH 464
Query: 396 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVV 452
+K T++V D V+++EGP K +QG V+ IYRGI+FI+D++ E G+ C+K+ C +
Sbjct: 465 HKKTMSVNDTVKVLEGPLKDRQGIVKQIYRGIIFIYDQNETEDCGYFCSKAQMCEKI 521
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 501 GGHDAL--VGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISD 553
G D L +G T+++R+GP KGY +V+ ++ V V+L SQ KV+TV +S+
Sbjct: 592 GDKDGLFSIGQTLRIRVGPLKGYLCQVLAIRYSDVTVKLGSQQKVLTVKSEHLSE 646
>gi|400603307|gb|EJP70905.1| transcription initiation protein [Beauveria bassiana ARSEF 2860]
Length = 1050
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 210/765 (27%), Positives = 344/765 (44%), Gaps = 90/765 (11%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K +YIEA ++ + A G+ N+Y + K+ LV I++M ++L V +K L W RM
Sbjct: 264 MKGIVYIEAQRQTDILVALDGILNVYPRTKMTLVDIKDMPELLRV-TKTPTLEPGAWCRM 322
Query: 81 KIG-NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEG--REVAKKKPF----VPP 133
+ + GDLA+V+ V V+ IPR+D + L ++ +K+ F PP
Sbjct: 323 RRPIKHNGDLAQVLAVTENGLEARVRFIPRLDYGMRDDALGSLSQDGKRKRAFGGGPKPP 382
Query: 134 PRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
R + EAR+ H R + +P T + G F++GF K V ++ + ++ PT +
Sbjct: 383 QRLFSEVEARKRHPRY-IQGNPTTNTW--TYMGDEFENGFQVKDVKIQQLILVDVNPTLE 439
Query: 194 ELEKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEE 250
E+ +F + E+G ++ A ++L + K ++ GD + V G+ K + G V +
Sbjct: 440 EVTRFASGAEDGTENLDLKALAASLKDSNTKVTYLPGDVIEVYSGEQKGVVGKATNVQGD 499
Query: 251 NVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILS 308
V + L +T+ V K L K F+ G+HVKV+ G++ G V+K+ + + +L+
Sbjct: 500 IVTMTVTEGDLAGQTIEVPIKGLRKRFKIGDHVKVIGGSRFQDEVGTVVKISEDKVTLLT 559
Query: 309 DTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGV 368
D T ++ VF+ D+ E+S++ G +G Y L DLV LD + G +++V+ ++ VL
Sbjct: 560 DHTNNEVTVFSKDLREASDIG-GQGSLGQYSLHDLVQLDMTTVGCVVKVDRDSMVVLDQF 618
Query: 369 PDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL 428
D +V ++ K K++ DR + + + DVV+ G + +QG + HI+R +
Sbjct: 619 GDTRQVMPSQISN-KIPQRKQAVAADREGSEIRLDDVVKEYTG--QQRQGKIIHIHRSYV 675
Query: 429 FIHDRHHLEHAGFICAKSS--SCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYS 486
F+H E+AG K+S + V G R N +G + N P G +
Sbjct: 676 FLHTNDSNENAGVFVTKASLVNTVAAKGGRVNAAASGPDLTTMN----PALKVHKNGSEN 731
Query: 487 RGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTV 546
+ P G D + TV ++ G YKG G V D RVEL ++ K+VTV
Sbjct: 732 KPITPIK------MFGRDKAINQTVIIKKGAYKGLLGIVKDSTDTHCRVELHTKSKIVTV 785
Query: 547 DRSMIS-------DNVVVSTPYRDTPRYGMGSETPMHP------------SRTPLHPYMT 587
R ++ ++ ++ R P +G G P R P T
Sbjct: 786 PRDSLNFKDKTSGASIDINGRGRGAPGFGRGDRMPSWQGGSRTPAAGGAGDRVPAWGSRT 845
Query: 588 PMRDAGATPI-----HDGMRTPMR---DRAWNPYTPMSPPRDNWEDGNPGSWGT---SPQ 636
P G TP + G RTP R NPY DG+ ++G+ +P
Sbjct: 846 PAAAGGRTPAWKGQDYSGSRTPAWADGSRTVNPY-----------DGSRTAYGSGSRTPA 894
Query: 637 YQPGSPPSRAYEAPTPGSGWAS---TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQP 693
+Q G+ P PG + + TP Y G DS ++ PS + S P
Sbjct: 895 WQSGA------RTPAPGDAFGAGSRTPA--YGGGGG--DSWASGSKTPS-WGASAPTPGA 943
Query: 694 MTPNSASYLPGTPGGQPMTPGTGG-LDAMSP-VIGADNEGPWFMP 736
M ++ Y PG G P GG L A +P GA G + P
Sbjct: 944 MGNDTWGYTPGAGAGAYDAPTPGGALGAPTPGAFGAPTPGAYSAP 988
>gi|68466615|ref|XP_722503.1| potential RNA Pol II transcription elongation factor [Candida
albicans SC5314]
gi|68466898|ref|XP_722364.1| potential RNA Pol II transcription elongation factor [Candida
albicans SC5314]
gi|74587680|sp|Q5ALX3.1|SPT5_CANAL RecName: Full=Transcription elongation factor SPT5; AltName:
Full=Chromatin elongation factor SPT5
gi|46444334|gb|EAL03609.1| potential RNA Pol II transcription elongation factor [Candida
albicans SC5314]
gi|46444482|gb|EAL03756.1| potential RNA Pol II transcription elongation factor [Candida
albicans SC5314]
Length = 956
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 168/572 (29%), Positives = 286/572 (50%), Gaps = 48/572 (8%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AV 65
+G+ L I +V D YIYIEA + + +A G+ N++ + +LVP++E D+L V
Sbjct: 241 QGNPLDILTVFQRDAFTGYIYIEAKRPDAIDKALVGMVNVFVRDKLLVPVKEYPDLLKQV 300
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-QALANKLEGREV 124
+S +++ +VR+K G Y+GDLA V ++ V +++PR+D Q +G+ +
Sbjct: 301 KSSDVEIRPGIYVRIKRGIYRGDLAIVDNLSENGLDVRCQVVPRLDYGQNDEIGPDGKVI 360
Query: 125 AKKKPFVPPPRFMNVDEARELH-IRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
K P P + +AR +++ R P + Y G + DG+LYK ++ I
Sbjct: 361 --KSKIKPLPALFSEQKARMYDPYKLQMGRVPNSFIY----RGNEYYDGYLYKDFKLQFI 414
Query: 184 SAQNIQPTFDELEKFRTPG-ENGESDIASLSTLFAN-----RKKGHFMKGDAVIVIKGDL 237
+++ PT +EL++F+ E+G + A +TL N + F GD V + +G+
Sbjct: 415 QTKDVNPTLEELDRFQNQNDEDGLNLQAIAATLKGNNAGEGKSSTAFQPGDKVEIRRGEQ 474
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPK----TLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
G V + + I+ G P+ L V + +L K F G+HV++V G T
Sbjct: 475 AKTIGIVVETALNEITIKVTDSGDPRFVDQRLTVPANDLRKIFYEGDHVRIVEGKHFDET 534
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGD-YELRDLVLLDNNSFG 352
G+V+K++ ++I+SD TKED+RVFA+ +V++++ ++ + Y+++DLV L + G
Sbjct: 535 GLVIKIDGDSVVIVSDQTKEDVRVFANYLVKATDASSNFDLLNSKYDIKDLVELSGLTVG 594
Query: 353 VIIRVESEAFQVLKGVPDRPEVALVKLRE--IKCKLEKKSNVQ---DRNKNTVAVKDVVR 407
VII+ E F VL + L+ +R+ I KL++ Q DRN T+ V D V+
Sbjct: 595 VIIKAEKNIFDVLT-----TDGRLISVRQSGIASKLKQSRREQVATDRNGTTIRVGDTVK 649
Query: 408 IVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAK--SSSCVVVGGSRANGDRNGDA 465
+ G K ++G + HIY+ LFI +E+ G A + + V S + D
Sbjct: 650 ELLGE-KSREGAILHIYKNALFIKSNEIVENLGIFVANRMNVTTVATKDSTVSKSLGPDL 708
Query: 466 YSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRV 525
S +LR P + AG + R GG D L+ V V G YKG +G+V
Sbjct: 709 TSMNPNLRLPNPV-----------AVAGLKTR--VGGRDKLLYKDVAVTSGSYKGLKGKV 755
Query: 526 VDVKGQSVRVELESQMKVVTVDRSMISDNVVV 557
+ R+EL ++ K + V ++ + NV+V
Sbjct: 756 TEADDLYARIELHTKSKKIKVLKNNL--NVIV 785
>gi|281201347|gb|EFA75559.1| transcription initiation factor Spt5 [Polysphondylium pallidum
PN500]
Length = 680
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/346 (34%), Positives = 192/346 (55%), Gaps = 23/346 (6%)
Query: 126 KKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISA 185
K+K PP F N ++ + +++D Y +GG + +GFL K + ++S+
Sbjct: 21 KRKKIRPPQVFFNYNDLSAKGYDIAKKQD---SSYL--MGGEKYYNGFLLKVMRVRSLIT 75
Query: 186 QNIQPTFDELEKFRTP--------GENGESDIASLSTLFAN------RKKGHFMKGDAVI 231
+ P+ +EL+KF+ G++ E S L A + +F KGD V
Sbjct: 76 DGVVPSLEELQKFQNRPEVENDGYGDDSEQPSTMNSILDAQIIPKVAARPINFSKGDTVK 135
Query: 232 VIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAG 291
VI+GDLKNL G V+ VD+++V + P L + L + EL KYF+ G+HVKV+SG G
Sbjct: 136 VIEGDLKNLMGIVDSVDDKSVAVLPLHDSLSEILIFHPSELQKYFKIGDHVKVISGRYEG 195
Query: 292 ATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSF 351
TG+VL+VE ++LSD T +I+V D+ E +E+ TG ++G+YEL DLV +
Sbjct: 196 ETGLVLRVEDIAAVLLSDLTITEIKVRPQDLQECTEIATGKLELGNYELHDLVQITPQKV 255
Query: 352 GVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKS-NVQDRNKNTVAVKDVVRIVE 410
G+I++VE ++F++L + V VKL+E+ K KS D + NT+ DVV +++
Sbjct: 256 GIIVKVERDSFKILD---ENSNVTTVKLQEVGNKRRTKSITTLDTHHNTLNANDVVEVID 312
Query: 411 GPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
G +GKQG + HI R LF+ + E+ G +++ C ++GGS+
Sbjct: 313 GQYRGKQGVILHISRNFLFLKSKDVFENGGIFVVRANYCSLLGGSK 358
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 140/348 (40%), Gaps = 102/348 (29%)
Query: 504 DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS------DNVVV 557
D+ + TV ++ G +KGY G V + V+VEL++ + + V R+ I
Sbjct: 414 DSPLHKTVTIKTGSWKGYVGIVRECTDTMVQVELQTNSRRINVQRNNILLPGERLHQQTQ 473
Query: 558 STPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMS 617
S + + + + S TPM +P MTPMR + TP R+++ +P+ +
Sbjct: 474 SNDWDSSSQIYLASRTPMREE----NPAMTPMR----------INTPARNQSSDPWGSQT 519
Query: 618 PPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTY 677
P R GS S +YE PTP +G + P
Sbjct: 520 PHR-------------------GS--SISYEQPTP-TGNDNVP----------------- 540
Query: 678 VNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEG-PWFMP 736
PSP+ P Y P TP TP T +D D EG PW
Sbjct: 541 ---PSPFTP--------------YAPQTPA----TPSTPSIDEQD----DDLEGTPWKGT 575
Query: 737 DILV------RRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEI-EIVPPRKT 789
+I V SG+ +VV + DG V L +G + + EI E+V P K
Sbjct: 576 EIEVTFKPGTEHSGQTAVVKECK----DGIVTVELA---DGKFVKNVSQEILELVQPAKK 628
Query: 790 DKIKIMGGPHRGATGKLIGV---DGTDGIVKVDVSLDVKILDMAILAK 834
+++ ++ G + G+TG L + GIVK+D + D K+ M L K
Sbjct: 629 ERVVVIKGQYIGSTGTLFVISPGSTISGIVKMDSNSDFKVFKMGHLGK 676
>gi|448514638|ref|XP_003867163.1| Spt5 protein [Candida orthopsilosis Co 90-125]
gi|380351501|emb|CCG21725.1| Spt5 protein [Candida orthopsilosis Co 90-125]
Length = 930
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 158/548 (28%), Positives = 265/548 (48%), Gaps = 43/548 (7%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AVESKA 69
L I +V D + YIYIEA + + A +G+ N++ + +LV ++E D+L V+S
Sbjct: 226 LDILTVFQRDSFRGYIYIEAKRSDAIDRALEGMVNVFLRDKLLVSVKEYPDLLKQVKSSD 285
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE-GREVAKKK 128
+++ +VR+ G YKGDLA V ++ V K++PR+D E G+ + K
Sbjct: 286 VEIVPGIYVRITRGKYKGDLAIVENLSENGLDVLCKVVPRLDYGKNDEFTEDGKRI--KS 343
Query: 129 PFVPPPRFMNVDEARELH-IRVERR---RDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
PPPR + +A+ V++R R GD +E DGFLYK ++ I
Sbjct: 344 TIRPPPRLFSGKDAKTYDPANVQQRGEKRFTYKGDEYE--------DGFLYKDFKLQYIQ 395
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLFANRK------KGHFMKGDAVIVIKGDLK 238
+++ PT EL+ F+T ++ D+A ++ N+K F GD V V +G+
Sbjct: 396 TKDVHPTLAELDLFQTGKDSDGIDLAKIAASLKNKKLNDGKQSTAFQPGDKVEVRRGEQA 455
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPK----TLAVNSKELCKYFEPGNHVKVVSGTQAGATG 294
G V + + I G PK L V + +L K F G+HV++V G TG
Sbjct: 456 KTVGLVVETALNEIKITVTDSGDPKFVNQKLTVPANDLRKIFNEGDHVRIVEGKHFDETG 515
Query: 295 MVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGI-TKIGDYELRDLVLLDNNSFGV 353
+V+K++ +I++SD TKED+RVFA+ +V++++ ++ + K Y+++DLV L ++ GV
Sbjct: 516 LVIKIDGDSVILVSDQTKEDVRVFANFLVKATDASSNVDNKNFKYDIKDLVELSASTVGV 575
Query: 354 IIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPC 413
I++ E F++L V + + ++ D+N T+ + D V+ G
Sbjct: 576 IVKAEKNIFEILTTDGRLINVKPTAIASKVTQTRREQIATDKNGFTIRIGDTVKESVGD- 634
Query: 414 KGKQGPVEHIYRGILFIHDRHHLEHAGFICAK--SSSCVVVGGSRANGDRNGDAYSRFNS 471
KG++G + HIY+ LFI +E+ G + S V S + D S +
Sbjct: 635 KGREGAILHIYKNALFIKSNEIIENLGIFVTNRMNVSTVATKDSMVSKSFGPDLTSMNPN 694
Query: 472 LRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
L+ P ++ G + R G D L+ V + G YKG +G+VV+
Sbjct: 695 LKLPDQLALQ-----------GLKTR--VQGRDKLLYKDVAITNGSYKGLKGKVVEADDI 741
Query: 532 SVRVELES 539
RVEL +
Sbjct: 742 YARVELHT 749
>gi|452989893|gb|EME89648.1| hypothetical protein MYCFIDRAFT_114530, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 986
Score = 199 bits (505), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 204/765 (26%), Positives = 340/765 (44%), Gaps = 120/765 (15%)
Query: 26 IYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGN 84
IY+EA HV A G+ N++ K ++P+ EM D+L V+ K+ +L + R K G
Sbjct: 257 IYVEARLADHVTAALDGITNVFMGTKPFMIPVEEMPDLLKVK-KSKELQPGMYCRPKRGL 315
Query: 85 YKGDLAKVVDVDNVRQRVTVKLIPRID--LQALANKL-------EGREVAKKKPF----- 130
Y GDLA + +V+ V +KLIPR+D L AN + +G+ K+K
Sbjct: 316 YSGDLAMIEEVEANGTEVQLKLIPRLDYGLTEDANAMAAGALEPDGQGGMKRKRVPPQFK 375
Query: 131 -VPPPRFMNVDEARELHIRVERRRDPMTGDYFENI---GGMLFKDGFLYKTVSMKSISAQ 186
PP R + ++A++ H R R G NI G + +GFL T + + +
Sbjct: 376 QRPPARLFSENDAKKKHSRYLSR----PGGIITNIWTYQGKEYVNGFLVDTFRIAHLQTE 431
Query: 187 NIQPTFDELEKFRTPGENGES--DIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWV 244
N+ PT +E+ KF E+G D+A+L+ ++ GD V + +G+ K + G
Sbjct: 432 NVNPTLEEVTKFAASTEDGTENLDLAALAQTLKASAGADYLPGDKVEIFRGEQKGVTGRA 491
Query: 245 EKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQH 302
+V + + I+ + L + + ++L K F+ G+HVKV+ G++ GMV++++
Sbjct: 492 SEVYNDVIKIKVDSGSLAGQVVEAPIRDLRKNFKEGDHVKVIGGSKYQEEVGMVVRIKDD 551
Query: 303 VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAF 362
+ IL+D+ +++I VFA D+ E+++ + G Y+L DLV LD ++ G +++V+ E+
Sbjct: 552 RVTILTDSNQQEISVFAKDLREATD-SGGTVGTSQYDLFDLVQLDASTVGCVVKVDRESL 610
Query: 363 QVL-------KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKG 415
++L +P + K RE ++++ N +K+ +I E +G
Sbjct: 611 RILDQLGAIRNALPSSISNKIEKRREGAPAVDQQGN---------EIKNEDKIKEYGGEG 661
Query: 416 KQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTP 475
++G V H++RG +F R ++AG A++++ +V+ A G R G + T
Sbjct: 662 REGKVLHVHRGYVFAQSRELRDNAGVFVARTNNVLVMA---AKGGRMGGGVD-LTKMNTA 717
Query: 476 PRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRV 535
+ P G P GR+R L+G TV++++G YK ++G V + V
Sbjct: 718 LKGPGGAGGAGMPPPMQKGRDR--------LIGQTVRIKVGNYKAHKGIVKETDAHGALV 769
Query: 536 ELESQMKVVTVDRSMISDNVVVSTP----YRDTPRYGMGSETPMHPSRTPLHPY------ 585
E+ + K + + ++ V+ T D +G G P
Sbjct: 770 EIHGKTKKLNFPKEKLA--VIHPTTGEKICEDASTFGTGRGAGPPGRPPPSGMPPGRVPT 827
Query: 586 --MTPMRDAGATPIH---DGMRTPM-RDRAWN---------------------------- 611
+ PM G TP + DG RTP+ R AW
Sbjct: 828 YGVPPMATGGRTPAYAMGDGGRTPVGRTPAWQGSGGQTAYGGGGMTSYGGQTSYGGATSY 887
Query: 612 ----PYTPMSPPRDNWEDGNPGS-WGTSPQYQPGS----PPSRAYEAPTPGSGW-ASTPG 661
+ W NP + G +P Y S P EAPTPG+ + A TPG
Sbjct: 888 GGGSAWGGGGGAASTW---NPNAGGGRTPAYIANSGSKTPAYGGLEAPTPGADYSAPTPG 944
Query: 662 GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP 706
Y+D TP P+ +TPGG P TP A Y TP
Sbjct: 945 ATYTDQPTPGAFRGGQYQTPANC--ATPGGFPETP--APYSAETP 985
>gi|408393063|gb|EKJ72333.1| hypothetical protein FPSE_07505 [Fusarium pseudograminearum CS3096]
Length = 1041
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 205/754 (27%), Positives = 340/754 (45%), Gaps = 92/754 (12%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K ++Y+EA ++ + + + N+Y K++LV I++M ++ + SK L WVR+
Sbjct: 261 MKGFVYVEARRQTDILKGLDSMMNVYPHSKMILVDIKDMPELFRI-SKTPTLEPGAWVRL 319
Query: 81 KIG-NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPF----VPPPR 135
+ + GDLA+V+DV V+ IPR+D + L + +K+PF PP R
Sbjct: 320 RRPPKHNGDLAQVIDVTENGLEARVRFIPRLDYGMRDDALSA-DGKRKRPFGNGPKPPQR 378
Query: 136 FMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDEL 195
+ EAR+ + R + +P TG + N F++GF + V ++ ++ ++ P+ +E+
Sbjct: 379 LFSEIEARKRNPRA-IQGNPSTGTWTYN--NEEFENGFQVRDVKIQQLTVTDVNPSLEEV 435
Query: 196 EKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
+F + E+G ++ A +L + ++ GD V V G+ K + G +V + V
Sbjct: 436 TRFASGAEDGTENLDLKALAHSLKDSNALATYLPGDVVEVYTGEQKGVVGKAMRVHSDVV 495
Query: 253 HIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDT 310
I E + + + + V + L K F+ G+HVKV+ G++ GMV+ + + IL+D
Sbjct: 496 SITVTEGELVGQEIDVPIRALRKRFDVGDHVKVIGGSKFRDEVGMVVNIRDDKVTILTDQ 555
Query: 311 TKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLK--GV 368
T +I VF+ D+ E+S++ G +G Y L DLV LD + G +++V+ E+ L G
Sbjct: 556 TNTEITVFSKDLREASDIG-GQGSLGQYSLHDLVQLDPTTVGCVVKVDRESLVALDQFGT 614
Query: 369 PDRPEVALVKLREIKCKLEKKSNVQ--DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRG 426
P + V +I K+ K+ DR+ + + ++DVV+ G + +QG + HI+R
Sbjct: 615 PRQ-----VMPSQISNKIPKRKTAVAVDRHGSEIRLEDVVKEYTG--QQRQGKIIHIHRS 667
Query: 427 ILFIHDRHHLEHAGFICAKSS--SCVVVGGSRAN-GDRNGDAYSRFNSLRTPPRIPQSPG 483
+F+H + EHAG K++ + V G R N G + N P G
Sbjct: 668 YIFLHSNDNKEHAGVFVTKANMVNTVAAKGGRVNTAAATGPDLTAMN----PALKLHKNG 723
Query: 484 RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKV 543
++ PP G D + TV ++ G YKG G V D RVEL ++ K
Sbjct: 724 SENKPVPPPRSF------GKDKAIEQTVVIKKGAYKGLLGIVKDTTDTHARVELHTKSKT 777
Query: 544 VTVDRSMISDNVVVSTPYRD----------------------TPRYGMGSETPM---HPS 578
+TV + ++ ++ D P + GS TPM +
Sbjct: 778 ITVPKDCLAFKNRMTGATIDIASRGGRGGYGGGAGRGGGGDRVPGWQSGSRTPMAGGNSD 837
Query: 579 RTPLHPYMTPMRDAGATPIH-----DGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGT 633
R P TP +G TP G RTP AW + P D GS G
Sbjct: 838 RVPAWGSRTPAA-SGRTPAWKAQDMSGARTP----AWADGSRTVNPYDGSRTAY-GSGGR 891
Query: 634 SPQYQPGSPPSRAYEAPTPGSGWAS---TPGGNYSDAGTPRDSSSTY-VNAPSPYLPSTP 689
+P +Q G P PG + + TP D+ + + V AP+ P
Sbjct: 892 TPAWQAGG------RTPAPGDAFGAGSRTPAYGGGDSWGSGSKTPAWGVTAPT---PGAS 942
Query: 690 GGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSP 723
GG P SY TPGG P G ++A +P
Sbjct: 943 GGDAWGP--GSYDAPTPGGALGAPTPGAMNAPTP 974
>gi|255724010|ref|XP_002546934.1| hypothetical protein CTRG_01240 [Candida tropicalis MYA-3404]
gi|240134825|gb|EER34379.1| hypothetical protein CTRG_01240 [Candida tropicalis MYA-3404]
Length = 980
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 158/568 (27%), Positives = 283/568 (49%), Gaps = 41/568 (7%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AV 65
+G+ L I +V D YIYIEA + + A +G+ N++ + +LVP++E D+L V
Sbjct: 223 QGTPLDILTVFQRDAFTGYIYIEAKRPDAIDRALEGMVNVFMRDKLLVPVKEYPDLLKQV 282
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVA 125
++ +++ +VR+K G YKGDLA V ++ V K++PR+D + + L+
Sbjct: 283 KTTDVEVVPGIYVRIKRGAYKGDLAIVDNLSENGLDVRCKVVPRLDY-GVNDTLDKNGKR 341
Query: 126 KKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISA 185
K P + +AR E+ ++ +F + DGFLYK ++ +
Sbjct: 342 VKSKIRPQQALFSEHKARTYD--PEKLQNGSGRGHFR-YANNDYIDGFLYKDFRIQFLQT 398
Query: 186 QNIQPTFDELEKFRTPGENGESDIASLSTLFANRK-----KGHFMKGDAVIVIKGDLKNL 240
Q++ P+ +EL+K + + ++A+++ N K F GD V + +G+
Sbjct: 399 QDVHPSLEELDKLQIKTDEDGLNLAAIAATLKNNKGDGKSSTAFQPGDKVEIRRGEQAKT 458
Query: 241 KGWVEKVDEENVHIRPEMKGLPK----TLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
G V + V I+ G PK L V + +L K F G+HV+VV G TG+V
Sbjct: 459 IGLVTEAALTEVTIKVTDSGDPKFVNQRLTVPASDLRKIFNEGDHVRVVEGRHLDETGLV 518
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKI-GDYELRDLVLLDNNSFGVII 355
+K++ +I +SD T+ED++VFA+ ++++++ ++ + ++ +Y+++DLV L + + GVI+
Sbjct: 519 IKIDGDSVIFVSDQTREDVKVFANYLIKATDASSNVDQMKSNYDIKDLVELSSLTVGVIV 578
Query: 356 RVESEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEG 411
+ E F VL + + +P K+ I+ + E+ + DR+ T+ V D V+ + G
Sbjct: 579 KAEKNIFGVLTTDGRLIDVKPSGIASKI--IQSRREQVAT--DRHGMTIRVGDTVKELLG 634
Query: 412 PCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRN-GDAYSRFN 470
K ++G + HIY+ LFI +E+ G A + V A ++ G + N
Sbjct: 635 D-KSREGAIVHIYKNSLFIKSTEVIENLGIFVANRMNVTTVSTKDAMVSKSLGPDLTSMN 693
Query: 471 -SLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK 529
+LR P P A + GG D L+ V+V G YKG +G+V D
Sbjct: 694 PNLRLP-------------NPSAMAGLKTRIGGRDKLIYKDVQVTSGSYKGLKGKVTDAD 740
Query: 530 GQSVRVELESQMKVVTVDRSMISDNVVV 557
+ R+EL ++ K + V + + NV+V
Sbjct: 741 DEFARIELHTKSKKIKVRKQHL--NVMV 766
>gi|346974077|gb|EGY17529.1| transcription elongation factor SPT5 [Verticillium dahliae VdLs.17]
Length = 1062
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 222/768 (28%), Positives = 339/768 (44%), Gaps = 138/768 (17%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA + + A G+ N+Y + K++LV I++ D+L V +K L WVR+
Sbjct: 267 MKGYIYVEAARSGDIMAALDGMLNVYPRSKLILVEIKDRPDLLRV-TKTATLEPGAWVRL 325
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDL--------QALANKLEGREVAKKKPFV 131
K + GDL +VVDV V+ IPR+D Q A+ R V P
Sbjct: 326 KRPQKHAGDLGQVVDVTESGLEARVRFIPRLDYGVRDDSATQITADGKRKRPVGMPGPR- 384
Query: 132 PPPRFMNVDEARELHIRVERRRDPMT------GDYFENIGGMLFKDGFLYKTVSMKSISA 185
PP R N EAR+ H R + +P T GD FEN GF K ++ +
Sbjct: 385 PPQRLFNEAEARKRHPRF-IQGNPQTKIWTYMGDDFEN--------GFQVKEYKIQQLVV 435
Query: 186 QNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH----FMKGDAVIVIKGDLKNLK 241
++ PT +E+ +F + E+G ++ L L A+ K + ++ GD + V +G+ K +
Sbjct: 436 TDVNPTLEEVTRFASGAEDGTENL-DLKALAASLKDSNTNVTYLPGDVIEVYEGEQKGVV 494
Query: 242 GWVEKVDEENVHIRPEMKGL--PKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLK 298
G V + V + ++G+ + + V +K L K F+ G+HVKV+ G++ GMV+K
Sbjct: 495 GRATTVSGDIVTLE-VIEGVLAGQVIEVPTKGLRKRFKEGDHVKVIGGSRFRDEVGMVVK 553
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
++ + ++D T ++ VF+ DV E+S++ G +G Y L DLV LD + G I++V+
Sbjct: 554 IQDDRVTFVTDQTNMEVTVFSKDVREASDMG-GQGSLGQYSLLDLVQLDPTTVGCIVKVD 612
Query: 359 SEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
E+ VL D +V ++ K K + DRN + + + DVVR E + +QG
Sbjct: 613 RESVAVLDQNGDARQVVPSQITN-KLPQRKIAVAADRNGSEIRLDDVVR--EWGGQQRQG 669
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR---NGDAYSRFNSLRTP 475
+ HIYR +++H + E+AG ++ + + A G R +G + N
Sbjct: 670 KIIHIYRSYIYLHSHDNKENAGVFVTRAGNVTTIA---AKGGRVVPSGPNLDQMNPAMK- 725
Query: 476 PRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRV 535
R+P G + PP G D +G TV ++ G YKG G V D RV
Sbjct: 726 -RLPA--GSDGKMAPPKSF-------GRDRALGQTVIIKKGGYKGLLGIVKDTTETHARV 775
Query: 536 ELESQMKVVTVDRSMIS-----DNVVVS------------------------------TP 560
EL ++ K V+V + +S V+ TP
Sbjct: 776 ELHTKSKTVSVPKDHLSYKDKNTGAVIDIGGRGGRGRGGGFGSGGGRGGGDSGWQGGRTP 835
Query: 561 YRDTPRY-GMGSETPM--HPSRTPLHPYM--------TPMRDAGATPIH--DGMRTPM-- 605
T R GS TP H RTP TP G+ + DG RT
Sbjct: 836 MAGTERTPAWGSRTPAANHGGRTPAWKSSGSGDLGSRTPAWADGSRTAYGGDGSRTAYGS 895
Query: 606 --RDRAWN--PYTPMSPPRDNWEDGN------PGSWGT---SPQYQPGSPP--------- 643
R AW TP +P D + G+ +WG+ +P Y S P
Sbjct: 896 GNRTPAWQSGARTP-APGGDAFGLGSRTPAYGADTWGSGSKTPAYGGASAPTPAASGGDS 954
Query: 644 ------SRAYEAPTPGSGW-ASTPGG-NYSDAGTPRDSSSTYVNAPSP 683
S AY+APTPG+G A TPG N G + VNAP+P
Sbjct: 955 WGGYSASAAYDAPTPGAGLSAPTPGALNAPTPGAYSAPTPGAVNAPTP 1002
>gi|238881953|gb|EEQ45591.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 947
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 167/572 (29%), Positives = 286/572 (50%), Gaps = 48/572 (8%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AV 65
+G+ L I +V D YIYIEA + + +A G+ N++ + +LVP++E D+L V
Sbjct: 238 QGNPLDILTVFQRDAFTGYIYIEAKRPDAIDKALVGMVNVFVRDKLLVPVKEYPDLLKQV 297
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-QALANKLEGREV 124
+S +++ +VR+K G Y+GDLA V ++ V +++PR+D Q +G+ +
Sbjct: 298 KSSDVEIRPGIYVRIKRGIYRGDLAIVDNLSENGLDVRCQVVPRLDYGQNDEIGPDGKVI 357
Query: 125 AKKKPFVPPPRFMNVDEARELH-IRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
K P P + +AR +++ R P + Y G + DG+LYK ++ I
Sbjct: 358 --KSKIKPLPALFSEQKARMYDPYKLQMGRVPNSFIY----RGNEYYDGYLYKDFKLQFI 411
Query: 184 SAQNIQPTFDELEKFRTPG-ENGESDIASLSTLFAN-----RKKGHFMKGDAVIVIKGDL 237
+++ PT +EL++F+ E+G + A +TL N + F GD V + +G+
Sbjct: 412 QTKDVNPTLEELDRFQNQNDEDGLNLQAIAATLKGNNAGEGKSSTAFQPGDKVEIRRGEQ 471
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPK----TLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
G V + + I+ G P+ L V + +L K F G+HV++V G T
Sbjct: 472 AKTIGIVVETALNEITIKVTDSGDPRFVDQRLTVPANDLRKIFYEGDHVRIVEGKHFDET 531
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGD-YELRDLVLLDNNSFG 352
G+V+K++ ++I+SD TKED+RVFA+ +V++++ ++ + Y+++DLV L + G
Sbjct: 532 GLVIKIDGDSVVIVSDQTKEDVRVFANYLVKATDASSNFDLLNSKYDIKDLVELSGLTVG 591
Query: 353 VIIRVESEAFQVLKGVPDRPEVALVKLRE--IKCKLEKKSNVQ---DRNKNTVAVKDVVR 407
VII+ E F VL + L+ +R+ I KL++ Q DRN T+ V D V+
Sbjct: 592 VIIKAEKNIFDVLT-----TDGRLISVRQSGIASKLKQSRREQVATDRNGMTIRVGDTVK 646
Query: 408 IVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAK--SSSCVVVGGSRANGDRNGDA 465
+ G K ++G + HIY+ LFI +E+ G A + + + S + D
Sbjct: 647 ELLGE-KSREGAILHIYKNALFIKSNEIVENLGIFVANRMNVTTIATKDSTVSKSLGPDL 705
Query: 466 YSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRV 525
S +LR P + AG + R GG D L+ V V G YKG +G+V
Sbjct: 706 TSMNPNLRLPNPV-----------AVAGLKTR--VGGRDKLLYKDVAVTSGSYKGLKGKV 752
Query: 526 VDVKGQSVRVELESQMKVVTVDRSMISDNVVV 557
+ R+EL ++ K + V ++ + NV+V
Sbjct: 753 TEADDLYARIELHTKSKKIKVLKNNL--NVIV 782
>gi|46126293|ref|XP_387700.1| hypothetical protein FG07524.1 [Gibberella zeae PH-1]
gi|116256791|sp|Q4I5I4.1|SPT5_GIBZE RecName: Full=Transcription elongation factor SPT5; AltName:
Full=Chromatin elongation factor SPT5
Length = 1042
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 205/754 (27%), Positives = 339/754 (44%), Gaps = 92/754 (12%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K ++Y+EA ++ + + + N+Y K++LV I++M ++ + SK L WVR+
Sbjct: 262 MKGFVYVEARRQTDILKGLDSMMNVYPHSKMILVDIKDMPELFRI-SKTPTLEPGAWVRL 320
Query: 81 KIG-NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPF----VPPPR 135
+ + GDLA+V+DV V+ IPR+D + L + +K+PF PP R
Sbjct: 321 RRPPKHNGDLAQVIDVTENGLEARVRFIPRLDYGMRDDALSA-DGKRKRPFGNGPKPPQR 379
Query: 136 FMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDEL 195
+ EAR+ + R + +P TG + N F++GF + V ++ ++ ++ P+ +E+
Sbjct: 380 LFSEIEARKRNPRA-IQGNPSTGTWTYN--NEEFENGFQVRDVKIQQLTVTDVNPSLEEV 436
Query: 196 EKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
+F + E+G ++ A +L + ++ GD V V G+ K + G +V + V
Sbjct: 437 TRFASGAEDGTENLDLKALAHSLKDSNALATYLPGDVVEVYTGEQKGVVGKAMRVHSDVV 496
Query: 253 HIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDT 310
I E + + + + V + L K F G+HVKV+ G++ GMV+ + + IL+D
Sbjct: 497 SITVTEGELVGQEIDVPIRALRKRFNVGDHVKVIGGSKFRDEVGMVVNIRDDKVTILTDQ 556
Query: 311 TKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLK--GV 368
T +I VF+ D+ E+S++ G +G Y L DLV LD + G +++V+ E+ L G
Sbjct: 557 TNTEITVFSKDLREASDIG-GQGSLGQYSLHDLVQLDPTTVGCVVKVDRESLVALDQFGT 615
Query: 369 PDRPEVALVKLREIKCKLEKKSNVQ--DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRG 426
P + V +I K+ K+ DR+ + + ++DVV+ G + +QG + HI+R
Sbjct: 616 PRQ-----VMPSQISNKIPKRKTAVAVDRHGSEIRLEDVVKEYTG--QQRQGKIIHIHRS 668
Query: 427 ILFIHDRHHLEHAGFICAKSS--SCVVVGGSRAN-GDRNGDAYSRFNSLRTPPRIPQSPG 483
+F+H + EHAG K++ + V G R N G + N P G
Sbjct: 669 YIFLHSNDNKEHAGVFVTKANMVNTVAAKGGRVNTAAATGPDLTAMN----PALKLHKNG 724
Query: 484 RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKV 543
++ PP G D + TV ++ G YKG G V D RVEL ++ K
Sbjct: 725 SENKPVPPPRSF------GKDKAIEQTVVIKKGAYKGLLGIVKDTTDTHARVELHTKSKT 778
Query: 544 VTVDRSMISDNVVVSTPYRD----------------------TPRYGMGSETPM---HPS 578
+TV + ++ ++ D P + GS TPM +
Sbjct: 779 ITVPKDCLAFKNRMTGATIDIASRGGRGGYGGGAGRGGGGDRVPGWQSGSRTPMAGGNSD 838
Query: 579 RTPLHPYMTPMRDAGATPIH-----DGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGT 633
R P TP +G TP G RTP AW + P D GS G
Sbjct: 839 RVPAWGSRTPAA-SGRTPAWKAQDMSGARTP----AWADGSRTVNPYDGSRTAY-GSGGR 892
Query: 634 SPQYQPGSPPSRAYEAPTPGSGWAS---TPGGNYSDAGTPRDSSSTY-VNAPSPYLPSTP 689
+P +Q G P PG + + TP D+ + + V AP+ P
Sbjct: 893 TPAWQAGG------RTPAPGDAFGAGSRTPAYGGGDSWGSGSKTPAWGVTAPT---PGAS 943
Query: 690 GGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSP 723
GG P SY TPGG P G ++A +P
Sbjct: 944 GGDAWGP--GSYDAPTPGGALGAPTPGAMNAPTP 975
>gi|296085968|emb|CBI31409.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 197 bits (502), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 150/232 (64%), Gaps = 6/232 (2%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G++LQI S +++H+K +IYIEADK+ + EACKGL +IY+ +V VP
Sbjct: 154 MQKYVDLQSLGTKLQIISAFSVEHVKGFIYIEADKQCDINEACKGLCSIYTSRVAPVPKN 213
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E+T +L+V SK ++S TW RMK G YKGDLA++V V + +++ TVKLIPRIDLQA+A
Sbjct: 214 EVTHLLSVRSKCNEISEGTWARMKNGKYKGDLAQIVVVSDAQKKATVKLIPRIDLQAMAE 273
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
K G AKK+ P PR ++ E E ++ RRD TG FE + G + KDG+LYK
Sbjct: 274 KFGGGVSAKKRN-NPAPRLISSSELEEFRPLIQYRRDRDTGKLFEILDGQMLKDGYLYKK 332
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGES-DIASLSTLFANRKKGHFMKGD 228
VS+ S+S + P+ +EL KF TP N ES D+ LS L+ RK+ K D
Sbjct: 333 VSIDSLSCWGVTPSEEELHKF-TPSSNEESVDLEWLSQLYGERKQKRTTKSD 383
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/223 (34%), Positives = 127/223 (56%), Gaps = 5/223 (2%)
Query: 335 IGDYELRDLVLLDNNSFGVIIRVESE-AFQVLKGVPDRPEVALVKLREIKCKL-EKKSNV 392
+ +EL DLV FG++I +E + +++LK P+ P V V L E+K L E K
Sbjct: 398 VNSFELHDLVCFGRKDFGIVIGMEKDDNYKILKDGPEGPVVQTVVLHELKNPLFENKFTA 457
Query: 393 QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSC--V 450
D++ T+++ D ++++EGP KG+QG V+ IYRG++F++D + E+ G+ C+KS C +
Sbjct: 458 LDQHMKTISINDTLKVLEGPLKGRQGLVKKIYRGVIFLYDENETENNGYFCSKSQMCEKI 517
Query: 451 VVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTT 510
+ G N S F + P+ P SP + + NRG + G + VG T
Sbjct: 518 KLYGDACNEKGGESGPSGFEDFTSSPQSPLSPKKPWQARENNRDFNRGDKDGMFS-VGQT 576
Query: 511 VKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISD 553
+++R+GP KGY RV+ ++ V V+L+SQ KV+TV +S+
Sbjct: 577 LRIRVGPLKGYLCRVLAIRYSDVTVKLDSQHKVLTVKCEHLSE 619
>gi|241950785|ref|XP_002418115.1| chromatin elongation factor, putative; transcription elongation
factor, putative [Candida dubliniensis CD36]
gi|223641454|emb|CAX43415.1| chromatin elongation factor, putative [Candida dubliniensis CD36]
Length = 942
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 166/570 (29%), Positives = 284/570 (49%), Gaps = 44/570 (7%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL-AV 65
+G+ L I +V D YIYIEA + + +A G+ N++ + +LVP++E D+L V
Sbjct: 238 QGNPLDILTVFQRDAFTGYIYIEAKRPDAIDKALVGMVNVFVRDKLLVPVKEYPDLLKQV 297
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-QALANKLEGREV 124
+S +++ +VR+K G Y+GDLA V ++ V +++PR+D Q +G+ +
Sbjct: 298 KSSDVEIRPGIYVRIKRGIYRGDLAIVDNLSENGLDVRCQVVPRLDYGQNDEIGPDGKVI 357
Query: 125 AKKKPFVPPPRFMNVDEARELH-IRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
K P P + +AR +++ R P + Y G + DG+LYK ++ I
Sbjct: 358 --KSKIKPMPALFSEQKARMYDPYKLQMGRVPNSFIYR----GNEYYDGYLYKDFKLQFI 411
Query: 184 SAQNIQPTFDELEKFRTPG-ENGESDIASLSTLFAN-----RKKGHFMKGDAVIVIKGDL 237
+++ PT +EL++F+ E+G + A +TL N + F GD V + +G+
Sbjct: 412 QTKDVNPTLEELDRFQNQNDEDGLNLQAIAATLKGNNASEGKSSTAFQPGDKVEIRRGEQ 471
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPK----TLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
G V + + I+ G P+ L V + +L K F G+HV++V G T
Sbjct: 472 AKTIGVVVETALNEITIKVTDSGDPRFVDQRLTVPANDLRKIFYEGDHVRIVEGKHFDET 531
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGD-YELRDLVLLDNNSFG 352
G+V+K++ ++I+SD TKED+RVFA+ +V++++ ++ + + Y+++DLV L + G
Sbjct: 532 GLVIKIDGDSVVIVSDQTKEDVRVFANYLVKATDASSNFDLLSNKYDIKDLVELSGLTVG 591
Query: 353 VIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ---DRNKNTVAVKDVVRIV 409
VI++ E F VL + VK I KL++ Q DRN T+ V D V+ +
Sbjct: 592 VIVKAEKNIFDVL---TTDGRLISVKQSGIASKLKQSRREQVATDRNGMTIRVGDTVKEL 648
Query: 410 EGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAK--SSSCVVVGGSRANGDRNGDAYS 467
G K ++G + HIY+ LFI +E+ G A + + + S + D S
Sbjct: 649 LGE-KSREGAILHIYKNALFIKSNEIVENLGIFVANRMNVTTIATKDSMVSKSLGPDLTS 707
Query: 468 RFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVD 527
+LR P + AG + R GG D L+ V V G YKG +G+V +
Sbjct: 708 MNPNLRLPNPV-----------AVAGLKTR--VGGRDKLLYKDVAVTSGSYKGLKGKVTE 754
Query: 528 VKGQSVRVELESQMKVVTVDRSMISDNVVV 557
R+EL ++ K + V ++ + NV+V
Sbjct: 755 ADDLYARIELHTKSKKIKVLKNNL--NVIV 782
>gi|359486871|ref|XP_002272748.2| PREDICTED: uncharacterized protein LOC100256388 [Vitis vinifera]
Length = 2667
Score = 197 bits (500), Expect = 3e-47, Method: Composition-based stats.
Identities = 109/232 (46%), Positives = 150/232 (64%), Gaps = 6/232 (2%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G++LQI S +++H+K +IYIEADK+ + EACKGL +IY+ +V VP
Sbjct: 1181 MQKYVDLQSLGTKLQIISAFSVEHVKGFIYIEADKQCDINEACKGLCSIYTSRVAPVPKN 1240
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E+T +L+V SK ++S TW RMK G YKGDLA++V V + +++ TVKLIPRIDLQA+A
Sbjct: 1241 EVTHLLSVRSKCNEISEGTWARMKNGKYKGDLAQIVVVSDAQKKATVKLIPRIDLQAMAE 1300
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
K G AKK+ P PR ++ E E ++ RRD TG FE + G + KDG+LYK
Sbjct: 1301 KFGGGVSAKKRN-NPAPRLISSSELEEFRPLIQYRRDRDTGKLFEILDGQMLKDGYLYKK 1359
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGES-DIASLSTLFANRKKGHFMKGD 228
VS+ S+S + P+ +EL KF TP N ES D+ LS L+ RK+ K D
Sbjct: 1360 VSIDSLSCWGVTPSEEELHKF-TPSSNEESVDLEWLSQLYGERKQKRTTKSD 1410
Score = 134 bits (336), Expect = 3e-28, Method: Composition-based stats.
Identities = 110/413 (26%), Positives = 177/413 (42%), Gaps = 35/413 (8%)
Query: 335 IGDYELRDLVLLDNNSFGVIIRVESE-AFQVLKGVPDRPEVALVKLREIKCKL-EKKSNV 392
+ +EL DLV FG++I +E + +++LK P+ P V V L E+K L E K
Sbjct: 1425 VNSFELHDLVCFGRKDFGIVIGMEKDDNYKILKDGPEGPVVQTVVLHELKNPLFENKFTA 1484
Query: 393 QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSC--V 450
D++ T+++ D ++++EGP KG+QG V+ IYRG++F++D + E+ G+ C+KS C +
Sbjct: 1485 LDQHMKTISINDTLKVLEGPLKGRQGLVKKIYRGVIFLYDENETENNGYFCSKSQMCEKI 1544
Query: 451 VVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTT 510
+ G N S F + P+ P SP + + NRG + G + VG T
Sbjct: 1545 KLYGDACNEKGGESGPSGFEDFTSSPQSPLSPKKPWQARENNRDFNRGDKDGMFS-VGQT 1603
Query: 511 VKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMG 570
+++R+GP KGY RV+ ++ V V+L+SQ KV+TV +S + G
Sbjct: 1604 LRIRVGPLKGYLCRVLAIRYSDVTVKLDSQHKVLTVKCEHLS----------EVRGKGFS 1653
Query: 571 SETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGS 630
+P + L + A DG T WN + ++W +
Sbjct: 1654 VSISDNPESSSLKSFGLLGTQDSARDWVDGAGTSAESDRWNTGETSAESENSWNKSATTA 1713
Query: 631 WGTSP----QYQPGSPPSRAYEAPTPGSGWA------STPGGNYSDAGTPRDSSSTYVNA 680
G+S + S +A + G+ W S GG++ D S+ N
Sbjct: 1714 LGSSVADGWEKAKLSNVDQAGSSKGAGNNWGDKTVADSDQGGSWGKGENCLDKSAATTNF 1773
Query: 681 PSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPW 733
G T N + G + G GG V D G W
Sbjct: 1774 ----------GSSATDNWGKAKLSSSGQAGSSKGAGGNWDNKIVADGDQVGGW 1816
>gi|302416395|ref|XP_003006029.1| transcription elongation factor SPT5 [Verticillium albo-atrum
VaMs.102]
gi|261355445|gb|EEY17873.1| transcription elongation factor SPT5 [Verticillium albo-atrum
VaMs.102]
Length = 1034
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 168/557 (30%), Positives = 272/557 (48%), Gaps = 57/557 (10%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA + + A G+ N+Y + K++LV I++ D+L V +K L WVR+
Sbjct: 267 MKGYIYVEAARSGDIMAALDGMLNVYPRSKLILVEIKDRPDLLRV-TKTATLEPGAWVRL 325
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDL--------QALANKLEGREVAKKKPFV 131
K + GDL +VVDV V+ IPR+D Q A+ R V P
Sbjct: 326 KRPQKHAGDLGQVVDVTESGLEARVRFIPRLDYGVRDDSATQITADGKRKRPVGMPGPR- 384
Query: 132 PPPRFMNVDEARELHIRVERRRDPMT------GDYFENIGGMLFKDGFLYKTVSMKSISA 185
PP R N EAR+ H R + +P T GD FEN GF K ++ +
Sbjct: 385 PPQRLFNEAEARKRHPRFIQG-NPQTKIWTYMGDDFEN--------GFQVKEYKIQQLVV 435
Query: 186 QNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH----FMKGDAVIVIKGDLKNLK 241
++ PT +E+ +F + E+G ++ L L A+ K + ++ GD + V +G+ K +
Sbjct: 436 TDVNPTLEEVTRFASGAEDGTENL-DLKALAASLKDSNTNVTYLPGDVIEVYEGEQKGVV 494
Query: 242 GWVEKVDEENVHIRPEMKGL--PKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLK 298
G V + V + ++G+ + + V +K L K F+ G+HVKV+ G++ GMV+K
Sbjct: 495 GRATTVSGDIVTLE-VIEGVLAGQVIEVPTKGLRKRFKEGDHVKVIGGSRFRDEVGMVVK 553
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
++ + ++D T ++ VF+ DV E+S++ G +G Y L DLV LD + G I++V+
Sbjct: 554 IQDDRVTFVTDQTNMEVTVFSKDVREASDMG-GQGSLGQYSLLDLVQLDPTTVGCIVKVD 612
Query: 359 SEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
E+ VL D +V ++ K K + DRN + + + DVVR E + +QG
Sbjct: 613 RESVAVLDQNGDARQVVPSQITN-KLPQRKIAVAADRNGSEIRLDDVVR--EWGGQQRQG 669
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDR---NGDAYSRFNSLRTP 475
+ HIYR +++H + E+AG ++ + + A G R +G + N
Sbjct: 670 KIIHIYRSYIYLHSHDNKENAGVFVTRAGNVTTIA---AKGGRVVPSGPNLDQMNPAMK- 725
Query: 476 PRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRV 535
R+P G + PP G D +G TV ++ G YKG G V D RV
Sbjct: 726 -RLPA--GSDGKMAPPKSF-------GRDRALGQTVIIKKGGYKGLLGIVKDTTETHARV 775
Query: 536 ELESQMKVVTVDRSMIS 552
EL ++ K V+V + +S
Sbjct: 776 ELHTKSKTVSVPKDHLS 792
>gi|453089787|gb|EMF17827.1| transcription elongation factor Spt5 [Mycosphaerella populorum
SO2202]
Length = 987
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 208/776 (26%), Positives = 334/776 (43%), Gaps = 138/776 (17%)
Query: 26 IYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGN 84
IY+EA + V A G+ N++ K L+PI EM +L V+ K+ L +VR K G
Sbjct: 244 IYVEARRLDDVTAALDGITNVFMGTKPQLIPIEEMPALLRVK-KSKTLEPGMYVRPKRGL 302
Query: 85 YKGDLAKVVDVDNVRQRVTVKLIPRIDL-------QALANKLEGREVAKKK----PFV-- 131
Y DLA V +V+ V +KLIPR+D A + +G+ K+K PF
Sbjct: 303 YANDLAMVEEVEANGTEVKLKLIPRLDYGQTEDANAAAVMEPDGQGGMKRKRVVQPFKQR 362
Query: 132 PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPT 191
PP R + EA+ H R ++ P G+ + G +++GF + + +++ PT
Sbjct: 363 PPARLFSETEAKRKHGRYLSKK-PTIGNVW-TYQGKEYEEGFYVDFFKVAHLQVEDVNPT 420
Query: 192 FDELEKFRTPGENGESDIASLSTLFANRKK--GHFMKGDAVIVIKGDLKNLKGWVEKVDE 249
+E+ KF E+G ++ + + ++ GD V + +G+ K + G +V
Sbjct: 421 LEEVTKFAAATEDGTENLDLAALAATLKAGAGADYLPGDKVEIFRGEQKGVNGRATQVYN 480
Query: 250 ENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKV-EQHVLII 306
E + I + L + + K+L K F G+HVKV+ G++ GMV+++ + + I
Sbjct: 481 EVIKISVDSGPLAGQVIEAPIKDLRKLFREGDHVKVIGGSKYQDEVGMVVRIRDDDRITI 540
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLK 366
L+D+ +++I VF+ D+ E+++ + G+ Y+L DLV LD ++ +++V+ E+ +VL
Sbjct: 541 LTDSNQQEITVFSKDLREATD-SGGVVGASKYDLFDLVQLDASTVACVVKVDRESLRVLD 599
Query: 367 GVPDRPEVALVKLREIKCKLEKKSN---VQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
+ V + + K+EK+ D N + +D ++ G + +QG V H+
Sbjct: 600 QLGS---VRALLPSAVSNKIEKRREGAPATDHQGNEIKPEDTIKEYGG--EARQGKVLHV 654
Query: 424 YRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPR----IP 479
+RG +F R E+AG A++++ + V A G R G ++ N P +P
Sbjct: 655 HRGYVFAQSRESRENAGVFVARTNNVLTVA---AKGGRVGPDLTKMNQALKGPNAGAPLP 711
Query: 480 QSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELES 539
P P GR+R LVG TVK+++GP K G V + VEL S
Sbjct: 712 MPP-------PMQRGRDR--------LVGRTVKIKVGPMKAMIGIVKESSDAGALVELHS 756
Query: 540 QMKVVTVDRSMIS---------------DNVVVSTPYRDTPRYGMGSETPMHPSRTPLHP 584
+ K +T+ + ++ + MGS TP P
Sbjct: 757 KNKKLTMPKEKLAVIDPTSGQVICPNANEFGFGGPRGPPGRGPPMGSATPSRPGYG---- 812
Query: 585 YMTPMRDAGATPIH---DGMRTPMRDRAWNPYTPMSPPRDNWEDGNPG------------ 629
PM G TP + G RTP AW +P W+ G G
Sbjct: 813 -APPMASGGRTPAYAMAGGGRTP----AWKGDGGRTP---AWQAGGGGQTAYGAGGTTSY 864
Query: 630 ---------------------------SW------GTSPQY---QPGSPPSRA---YEAP 650
+W G +P Y G P+ + EAP
Sbjct: 865 GGQTSYGGATSYGGGSVWGGGGGGAQSAWNPNAGGGRTPAYVANSGGKTPAYSGSGLEAP 924
Query: 651 TPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP 706
TPG+ A TPG Y D TP N P+ Y +TPGG P TP A Y TP
Sbjct: 925 TPGAYSAPTPGAGYGDQPTPGAYRGAAYNTPANY--ATPGGVPETP--APYSAETP 976
>gi|171680028|ref|XP_001904960.1| hypothetical protein [Podospora anserina S mat+]
gi|170939640|emb|CAP64867.1| unnamed protein product [Podospora anserina S mat+]
Length = 1007
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 273/546 (50%), Gaps = 39/546 (7%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQKVM-LVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K Y+YIEA ++ + + G+ N+Y + M LVPI++M D+L V K L+ WVRM
Sbjct: 212 MKGYVYIEALRQNDILLSLDGILNVYPRTKMDLVPIKDMPDLLRV-IKTPSLTPGAWVRM 270
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL--EG-REVAKKKPFVPPPRF 136
K + GDLA+V+DV V+ IPR+D + + +G R+ PP R
Sbjct: 271 KRPAKHAGDLAQVLDVTENGLEARVRFIPRLDYGVREDGIGPDGKRKRPGIPGPRPPQRL 330
Query: 137 MNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELE 196
+ EAR+ + R + +P T + G F++GF K + ++ + +++ PT +E+
Sbjct: 331 FSEAEARKKNPR-HLQGNPQTNSW--TFMGDEFENGFQVKDIKIQLLDVKDVNPTLEEVT 387
Query: 197 KFRTPGENGESDIASLSTLFANRKKGH----FMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
+F E+G ++ L L A+ K ++ GD + V +G+ + + G V + V
Sbjct: 388 RFAGGSEDGTENL-DLKALAASLKDSSSNVAYVPGDVIEVYEGEQRGVVGKAVDVRGDIV 446
Query: 253 HIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDT 310
+R L +T+ V +K L K F+ G+HVKV+ G++ GMV+ + Q + +L+D
Sbjct: 447 TLRVTEGNLAGQTIEVPNKGLRKLFKIGDHVKVIGGSRFRDEVGMVVNISQDRVTLLTDQ 506
Query: 311 TKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPD 370
T ++ VF+ D+ +S++ G +G Y L DLV LD + G I++V+ E+ VL
Sbjct: 507 TNNEVTVFSKDLRAASDIG-GQGSLGQYSLLDLVQLDATTVGCIVKVDRESVGVLD---Q 562
Query: 371 RPEVALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL 428
EV V +I KL K+ DR+ + + + DVVR G + +QG + HI+R +
Sbjct: 563 NGEVRQVMPSQITNKLPKRRTAVAADRSGSEIRLDDVVREYGG--QQRQGKIIHIHRSFI 620
Query: 429 FIHDRHHLEHAGFICAKSSS--CVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYS 486
F+H E+AG ++ + + G R N G + N P + +SP +
Sbjct: 621 FLHTNTTNENAGVFVTRAGNVNTIAAKGGRINSG-GGPDLTAMN-----PAMKRSPAENN 674
Query: 487 RGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTV 546
R P G D + TV +R G YKG G V D RVEL ++ K++TV
Sbjct: 675 RMAAPK-------SFGPDRAINQTVTIRRGGYKGLLGIVKDTTDTHARVELHTKSKIITV 727
Query: 547 DRSMIS 552
++ ++
Sbjct: 728 PKADLA 733
>gi|254582008|ref|XP_002496989.1| ZYRO0D12804p [Zygosaccharomyces rouxii]
gi|238939881|emb|CAR28056.1| ZYRO0D12804p [Zygosaccharomyces rouxii]
Length = 1049
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 161/565 (28%), Positives = 282/565 (49%), Gaps = 59/565 (10%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY+ + +L+P++E+ +L +S
Sbjct: 310 KLKIMSIFQRDNYTGRIYIEAPKQSVIEKFCYGVPDIYTSQKLLIPVQELPLLLKPSKSD 369
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID------LQALANKLEGR 122
+ L ++VR+K G YKGDLA V + V +K++PR+D + + N+ +GR
Sbjct: 370 DVSLEEGSYVRIKRGIYKGDLAVVDQISENNLEVMLKIVPRLDYGKFDEVDPVTNQKKGR 429
Query: 123 E--VAKKKP--FVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
A + P P + +D+A L+ R + DY DG+LYK+
Sbjct: 430 RPTFAHRPPAQLFNPTMALRLDQA-NLYKRDDNHFVYKNEDYV---------DGYLYKSF 479
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH--FMKGDAVIVIKGD 236
++ + +NIQPT +EL KF + + G D+ ++S + F +GD V V+ G+
Sbjct: 480 RIQHVETKNIQPTVEELAKFGS--KEGTVDLTTISQTIKKSQAARVTFQQGDRVEVLSGE 537
Query: 237 LKNLKGWVEKVDEENVHIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
+ +G V K + ++ P+ P V++ L K FEPG+HV V+SG G G+
Sbjct: 538 QRGSRGIVVKTSGDIATVKVPDFPLKPLEFPVST--LRKIFEPGDHVTVISGDHQGDAGL 595
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
V+ V+Q + +S+ TKE+I + A+++ +S + T + +Y L D+V L + II
Sbjct: 596 VVLVQQGQVTFMSNQTKEEITITANNLTKSMDSTPTSS---EYALHDIVELSAKNVACII 652
Query: 356 RVESEAFQVLKGVPDRPEVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEGP 412
+ + F+VL + +V+ + I K+ + D N N + + D V VE
Sbjct: 653 QAGHDIFKVLD---ESGKVSTITKGSILSKINTSRARVAAVDSNGNEIKIGDTV--VEKV 707
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
++G + +I +F+ + +E+AG + V S+ N L
Sbjct: 708 GARREGQILYIQSQQIFVMSKKIVENAGVFVVNPMNVEAVA-------------SKDNIL 754
Query: 473 RTPPRIPQ-SPGRYSRGGPPAGGRNRG----GRGGHDALVGTTVKVRLGPYKGYRGRVVD 527
+ + + +P +SR GPP+ +N+ R G D +G TV++R YKG G V D
Sbjct: 755 NSSLDLSKMNPEVFSRMGPPS--KNKSPQPQFRMGRDLALGKTVRIRSAGYKGQLGIVKD 812
Query: 528 VKGQSVRVELESQMKVVTVDRSMIS 552
V G + VEL S+ K VT+D+ ++
Sbjct: 813 VNGDNASVELHSKNKHVTIDKRKLT 837
>gi|358381621|gb|EHK19296.1| hypothetical protein TRIVIDRAFT_132655, partial [Trichoderma virens
Gv29-8]
Length = 999
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 217/802 (27%), Positives = 347/802 (43%), Gaps = 129/802 (16%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K+++Y+E ++ + A G+ N+Y K+ LV I++M ++L V +K L WVR+
Sbjct: 207 MKSFVYVETQRQTDILVALDGILNVYPHSKLTLVDIKDMPELLRV-TKTPTLEPGAWVRL 265
Query: 81 KIG-NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEG------REVAKKKPFVPP 133
+ + GDLA+V+DV V+ IPR+D L R+ PP
Sbjct: 266 RRPPKHSGDLAQVIDVTENGLEARVRFIPRLDYGMRDEALSAVTADGKRKRPPGMGPRPP 325
Query: 134 PRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
R + EAR+ H R + +P T + G F++GF K V ++ + ++ P+ +
Sbjct: 326 QRLFSEIEARKRHPR-HIQGNPTTNTW--TYMGDEFENGFQVKDVKIQQLVVTDVNPSLE 382
Query: 194 ELEKFRTPGENGESDIASLSTLFANRKKGH----FMKGDAVIVIKGDLKNLKGWVEKVDE 249
E+ +F + ++G ++ L L A+ K + ++ GD + V G+ + + G V
Sbjct: 383 EVTRFASGADDGTENL-DLKALAASLKDSNTLVTYLPGDIIEVYAGEQRGVVGKATNVQG 441
Query: 250 ENVHI---RPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLI 305
+ V + ++KG +++ V K L K F+ G+HVKV+ G++ G V+K+ + +
Sbjct: 442 DIVTMFVTEGDLKG--QSIEVPIKGLRKRFKIGDHVKVIGGSKFQDEVGTVVKISEDRVT 499
Query: 306 ILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVL 365
+L+D T ++ VF+ D+ E+S++ G +G YEL DLV LD + G I++V+ E+ VL
Sbjct: 500 LLTDHTNNEVTVFSKDLREASDIG-GQGSLGQYELHDLVQLDPTTVGCIVKVDRESLVVL 558
Query: 366 KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYR 425
D +V ++ K K++ DR + + + DVV+ G + +QG + HI+R
Sbjct: 559 DQFGDTRQVMPSQIPN-KLPKRKQAVAADREGSEIRLDDVVKEFSG--QQRQGKIIHIHR 615
Query: 426 GILFIHDRHHLEHAGFICAKSS--SCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPG 483
+F+H E+AG K+S + + G R N +G + N P G
Sbjct: 616 SYVFLHTHATNENAGVFVTKASMVNTIAAKGGRVNAAASGPDLTTMN----PALKIHKNG 671
Query: 484 RYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKV 543
++ A GR+R + TV ++ G YKG G V D RVEL ++ K
Sbjct: 672 TENKPLAKAFGRDRA--------INQTVIIKKGAYKGLLGIVKDTTDTHARVELHTKNKT 723
Query: 544 VTVDRSMISD-------NVVVSTPYRDT------------PRYGMGSETPMHP------- 577
+TV R ++ N+ ++ R P + GS TPM
Sbjct: 724 ITVPRDCLNFKDKNTGMNIDINGRGRPAPGGAGRGSGDRVPGWQGGSRTPMGSGGADRVP 783
Query: 578 ---SRTPLHPYMTPM-----RDAGATPI----------HDGMRTPM----RDRAWNPYTP 615
SRTP TP TP +DG RT R AW
Sbjct: 784 AWGSRTPATGGRTPAWKGQDYSGSRTPAWADGSRTVNPYDGSRTAYGSGSRTPAWQAGAR 843
Query: 616 MSPPRDNWEDGN--PG------------------SWGTSP-----------QYQPGSPPS 644
P D + G+ P +WG S Y PG+ S
Sbjct: 844 TPAPGDAFGAGSRTPAYAGGGGGGESWSSGSKTPAWGVSAPTPGASGNESWGYTPGATSS 903
Query: 645 RAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPG 704
AY+APTPG G S P A TP NAP+P + TP G +
Sbjct: 904 SAYDAPTPG-GAMSAPTPGALSAPTP-----GAYNAPTPGVAPTPAGGWQGGWGGTDSAP 957
Query: 705 TPGGQPMTP---GTGGLDAMSP 723
TP TP G GG A +P
Sbjct: 958 TPAAGAPTPSASGYGGYSAPTP 979
>gi|365763727|gb|EHN05253.1| Spt5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1063
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 276/563 (49%), Gaps = 55/563 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 319 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPNKSD 378
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + V +K++PR+D + + ++
Sbjct: 379 DVALEEGSYVRIKRGIYKGDLAMVDQISENNLEVMLKIVPRLDYGKFDEIDPTTQQRKSR 438
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+ F PP+ N +D+A L+ R +R DY DG+LYK++
Sbjct: 439 RPTFAHRAPPQLFNPTMALRLDQA-NLYKRDDRHFTYKNEDYI---------DGYLYKSL 488
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + +NIQPT +EL +F + + G D+ S+S A K F GD + V+ G+
Sbjct: 489 RIQHVETKNIQPTVEELARFGS--KEGAVDLTSVSQSIKKAQAAKVTFQPGDRIEVLNGE 546
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
+ KG V + ++ I+ + G L L K FEPG+HV V++G G G+V
Sbjct: 547 QRGSKGIVTRTTKDIATIK--LNGFTTPLEFPISTLRKIFEPGDHVTVINGEHQGDAGLV 604
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
L VEQ + +S T ++ + A+++ +S + T + +Y L D+V L + II+
Sbjct: 605 LMVEQGQVTFMSTQTSREVTITANNLSKSIDTTATSS---EYALHDIVELSAKNVACIIQ 661
Query: 357 VESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP 412
+ F+V + + +V+ + L +I + S+V D N N + + D IVE
Sbjct: 662 AGHDIFKV---IDETGKVSTITKGSILSKINTARARVSSV-DANGNEIKIGDT--IVEKV 715
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
++G V +I +F+ + +E+AG S+ V S+ N N S+ N
Sbjct: 716 GSRREGQVLYIQTQQIFVVSKKIVENAGVFVVNPSNVEAV-ASKDNMLSNKMDLSKMN-- 772
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNR---GGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK 529
P S+ GPP+ + RGG + +G TV++R YKG G V DV
Sbjct: 773 ---------PEIISKMGPPSSKTFQQPIQSRGGREVALGKTVRIRSAGYKGQLGIVKDVN 823
Query: 530 GQSVRVELESQMKVVTVDRSMIS 552
G VEL S+ K +T+D+ ++
Sbjct: 824 GDKATVELHSKNKHITIDKHKLT 846
>gi|259148566|emb|CAY81811.1| Spt5p [Saccharomyces cerevisiae EC1118]
Length = 1067
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 276/563 (49%), Gaps = 55/563 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 323 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPNKSD 382
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + V +K++PR+D + + ++
Sbjct: 383 DVALEEGSYVRIKRGIYKGDLAMVDQISENNLEVMLKIVPRLDYGKFDEIDPTTQQRKSR 442
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+ F PP+ N +D+A L+ R +R DY DG+LYK++
Sbjct: 443 RPTFAHRAPPQLFNPTMALRLDQA-NLYKRDDRHFTYKNEDYI---------DGYLYKSL 492
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + +NIQPT +EL +F + + G D+ S+S A K F GD + V+ G+
Sbjct: 493 RIQHVETKNIQPTVEELARFGS--KEGAVDLTSVSQSIKKAQAAKVTFQPGDRIEVLNGE 550
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
+ KG V + ++ I+ + G L L K FEPG+HV V++G G G+V
Sbjct: 551 QRGSKGIVTRTTKDIATIK--LNGFTTPLEFPISTLRKIFEPGDHVTVINGEHQGDAGLV 608
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
L VEQ + +S T ++ + A+++ +S + T + +Y L D+V L + II+
Sbjct: 609 LMVEQGQVTFMSTQTSREVTITANNLSKSIDTTATSS---EYALHDIVELSAKNVACIIQ 665
Query: 357 VESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP 412
+ F+V + + +V+ + L +I + S+V D N N + + D IVE
Sbjct: 666 AGHDIFKV---IDETGKVSTITKGSILSKINTARARVSSV-DANGNEIKIGDT--IVEKV 719
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
++G V +I +F+ + +E+AG S+ V S+ N N S+ N
Sbjct: 720 GSRREGQVLYIQTQQIFVVSKKIVENAGVFVVNPSNVEAV-ASKDNMLSNKMDLSKMN-- 776
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNR---GGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK 529
P S+ GPP+ + RGG + +G TV++R YKG G V DV
Sbjct: 777 ---------PEIISKMGPPSSKTFQQPIQSRGGREVALGKTVRIRSAGYKGQLGIVKDVN 827
Query: 530 GQSVRVELESQMKVVTVDRSMIS 552
G VEL S+ K +T+D+ ++
Sbjct: 828 GDKATVELHSKNKHITIDKHKLT 850
>gi|190408229|gb|EDV11494.1| transcription elongation factor SPT5 [Saccharomyces cerevisiae
RM11-1a]
Length = 1063
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 276/563 (49%), Gaps = 55/563 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 319 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPNKSD 378
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + V +K++PR+D + + ++
Sbjct: 379 DVALEEGSYVRIKRGIYKGDLAMVDQISENNLEVMLKIVPRLDYGKFDEIDPTTQQRKSR 438
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+ F PP+ N +D+A L+ R +R DY DG+LYK++
Sbjct: 439 RPTFAHRAPPQLFNPTMALRLDQA-NLYKRDDRHFTYKNEDYI---------DGYLYKSL 488
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + +NIQPT +EL +F + + G D+ S+S A K F GD + V+ G+
Sbjct: 489 RIQHVETKNIQPTVEELARFGS--KEGAVDLTSVSQSIKKAQAAKVTFQPGDRIEVLNGE 546
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
+ KG V + ++ I+ + G L L K FEPG+HV V++G G G+V
Sbjct: 547 QRGSKGIVTRTTKDIATIK--LNGFTTPLEFPISTLRKIFEPGDHVTVINGEHQGDAGLV 604
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
L VEQ + +S T ++ + A+++ +S + T + +Y L D+V L + II+
Sbjct: 605 LMVEQGQVTFMSTQTSREVTITANNLSKSIDTTATSS---EYALHDIVELSAKNVACIIQ 661
Query: 357 VESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP 412
+ F+V + + +V+ + L +I + S+V D N N + + D IVE
Sbjct: 662 AGHDIFKV---IDETGKVSTITKGSILSKINTARARVSSV-DANGNEIKIGDT--IVEKV 715
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
++G V +I +F+ + +E+AG S+ V S+ N N S+ N
Sbjct: 716 GSRREGQVLYIQTQQIFVVSKKIVENAGVFVVNPSNVEAV-ASKDNMLSNKMDLSKMN-- 772
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNR---GGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK 529
P S+ GPP+ + RGG + +G TV++R YKG G V DV
Sbjct: 773 ---------PEIISKMGPPSSKTFQQPIQSRGGREVALGKTVRIRSAGYKGQLGIVKDVN 823
Query: 530 GQSVRVELESQMKVVTVDRSMIS 552
G VEL S+ K +T+D+ ++
Sbjct: 824 GDKATVELHSKNKHITIDKHKLT 846
>gi|256273511|gb|EEU08445.1| Spt5p [Saccharomyces cerevisiae JAY291]
Length = 1063
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 275/563 (48%), Gaps = 55/563 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 319 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPNKSD 378
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + V +K++PR+D + + ++
Sbjct: 379 DVALEEGSYVRIKRGIYKGDLAMVDQISENNLEVMLKIVPRLDYGKFDEIDPTTQQRKSR 438
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+ F PP+ N +D+A L+ R +R DY DG+LYK+
Sbjct: 439 RPTFAHRAPPQLFNPTMALRLDQA-NLYKRDDRHFTYKNEDYI---------DGYLYKSF 488
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + +NIQPT +EL +F + + G D+ S+S A K F GD + V+ G+
Sbjct: 489 RIQHVETKNIQPTVEELARFGS--KEGAVDLTSVSQSIKKAQAAKVTFQPGDRIEVLNGE 546
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
+ KG V + ++ I+ + G L L K FEPG+HV V++G G G+V
Sbjct: 547 QRGSKGIVTRTTKDIATIK--LNGFTTPLEFPISTLRKIFEPGDHVTVINGEHQGDAGLV 604
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
L VEQ + +S T ++ + A+++ +S + T + +Y L D+V L + II+
Sbjct: 605 LMVEQGQVTFMSTQTSREVTITANNLSKSIDTTATSS---EYALHDIVELSAKNVACIIQ 661
Query: 357 VESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP 412
+ F+V + + +V+ + L +I + S+V D N N + + D IVE
Sbjct: 662 AGHDIFKV---IDETGKVSTITKGSILSKINTARARVSSV-DANGNEIKIGDT--IVEKV 715
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
++G V +I +F+ + +E+AG S+ V S+ N N S+ N
Sbjct: 716 GSRREGQVLYIQTQQIFVVSKKIVENAGVFVVNPSNVEAV-ASKDNMLSNKMDLSKMN-- 772
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNR---GGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK 529
P S+ GPP+ + RGG + +G TV++R YKG G V DV
Sbjct: 773 ---------PEIISKMGPPSSKTFQQPIQSRGGREVALGKTVRIRSAGYKGQLGIVKDVN 823
Query: 530 GQSVRVELESQMKVVTVDRSMIS 552
G VEL S+ K +T+D+ ++
Sbjct: 824 GDKATVELHSKNKHITIDKHKLT 846
>gi|323353003|gb|EGA85303.1| Spt5p [Saccharomyces cerevisiae VL3]
Length = 1063
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 275/563 (48%), Gaps = 55/563 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 319 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPNKSD 378
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + V +K++PR+D + + ++
Sbjct: 379 DVALEEGSYVRIKRGIYKGDLAMVDQISENNLEVMLKIVPRLDYGKFDEIDPTTQQRKSR 438
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+ F PP+ N +D+A L+ R +R DY DG+LYK+
Sbjct: 439 RPTFAHRAPPQLFNPTMALRLDQA-NLYKRDDRHFTYKNEDYI---------DGYLYKSX 488
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + +NIQPT +EL +F + + G D+ S+S A K F GD + V+ G+
Sbjct: 489 RIQHVETKNIQPTVEELARFGS--KEGAVDLTSVSQSIKKAQAAKVTFQPGDRIEVLNGE 546
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
+ KG V + ++ I+ + G L L K FEPG+HV V++G G G+V
Sbjct: 547 QRGSKGIVTRTTKDIATIK--LNGFTTPLEFPISTLRKIFEPGDHVTVINGEHQGDAGLV 604
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
L VEQ + +S T ++ + A+++ +S + T + +Y L D+V L + II+
Sbjct: 605 LMVEQGQVTFMSTQTSREVTITANNLSKSIDTTATSS---EYALHDIVELSAKNVACIIQ 661
Query: 357 VESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP 412
+ F+V + + +V+ + L +I + S+V D N N + + D IVE
Sbjct: 662 AGHDIFKV---IDETGKVSTITKGSILSKINTARARVSSV-DANGNEIKIGDT--IVEKV 715
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
++G V +I +F+ + +E+AG S+ V S+ N N S+ N
Sbjct: 716 GSRREGQVLYIQTQQIFVVSKKIVENAGVFVVNPSNVEAV-ASKDNMLSNKMDLSKMN-- 772
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNR---GGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK 529
P S+ GPP+ + RGG + +G TV++R YKG G V DV
Sbjct: 773 ---------PEIISKMGPPSSKTFQQPIQSRGGREVALGKTVRIRSAGYKGQLGIVKDVN 823
Query: 530 GQSVRVELESQMKVVTVDRSMIS 552
G VEL S+ K +T+D+ ++
Sbjct: 824 GDKATVELHSKNKHITIDKHKLT 846
>gi|413955133|gb|AFW87782.1| hypothetical protein ZEAMMB73_838818 [Zea mays]
Length = 508
Score = 193 bits (490), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/123 (73%), Positives = 106/123 (86%)
Query: 193 DELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
D L +F+ PG++ D+ASLSTL ANRKKGHFMKGDAVIVIKGDLKNL+GWVEKV++E V
Sbjct: 287 DMLVQFKKPGDDMNGDMASLSTLLANRKKGHFMKGDAVIVIKGDLKNLEGWVEKVEDETV 346
Query: 253 HIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTK 312
HIRP++ LPKTLA N KELCKYF+PG+HVKV+ G Q GATGMV+KVE HVLIILSDTTK
Sbjct: 347 HIRPKISDLPKTLAFNEKELCKYFKPGDHVKVILGVQEGATGMVVKVEGHVLIILSDTTK 406
Query: 313 EDI 315
E +
Sbjct: 407 EHV 409
>gi|6323632|ref|NP_013703.1| Spt5p [Saccharomyces cerevisiae S288c]
gi|134853|sp|P27692.1|SPT5_YEAST RecName: Full=Transcription elongation factor SPT5; AltName:
Full=Chromatin elongation factor SPT5
gi|172680|gb|AAA35085.1| SPT5 protein [Saccharomyces cerevisiae]
gi|854480|emb|CAA89942.1| Spt5p [Saccharomyces cerevisiae]
gi|285813993|tpg|DAA09888.1| TPA: Spt5p [Saccharomyces cerevisiae S288c]
gi|392297148|gb|EIW08248.1| Spt5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1063
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 275/563 (48%), Gaps = 55/563 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 319 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPNKSD 378
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + V +K++PR+D + + ++
Sbjct: 379 DVALEEGSYVRIKRGIYKGDLAMVDQISENNLEVMLKIVPRLDYGKFDEIDPTTQQRKSR 438
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+ F PP+ N +D+A L+ R +R DY DG+LYK+
Sbjct: 439 RPTFAHRAPPQLFNPTMALRLDQA-NLYKRDDRHFTYKNEDYI---------DGYLYKSF 488
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + +NIQPT +EL +F + + G D+ S+S A K F GD + V+ G+
Sbjct: 489 RIQHVETKNIQPTVEELARFGS--KEGAVDLTSVSQSIKKAQAAKVTFQPGDRIEVLNGE 546
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
+ KG V + ++ I+ + G L L K FEPG+HV V++G G G+V
Sbjct: 547 QRGSKGIVTRTTKDIATIK--LNGFTTPLEFPISTLRKIFEPGDHVTVINGEHQGDAGLV 604
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
L VEQ + +S T ++ + A+++ +S + T + +Y L D+V L + II+
Sbjct: 605 LMVEQGQVTFMSTQTSREVTITANNLSKSIDTTATSS---EYALHDIVELSAKNVACIIQ 661
Query: 357 VESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP 412
+ F+V + + +V+ + L +I + S+V D N N + + D IVE
Sbjct: 662 AGHDIFKV---IDETGKVSTITKGSILSKINTARARVSSV-DANGNEIKIGDT--IVEKV 715
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
++G V +I +F+ + +E+AG S+ V S+ N N S+ N
Sbjct: 716 GSRREGQVLYIQTQQIFVVSKKIVENAGVFVVNPSNVEAV-ASKDNMLSNKMDLSKMN-- 772
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNR---GGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK 529
P S+ GPP+ + RGG + +G TV++R YKG G V DV
Sbjct: 773 ---------PEIISKMGPPSSKTFQQPIQSRGGREVALGKTVRIRSAGYKGQLGIVKDVN 823
Query: 530 GQSVRVELESQMKVVTVDRSMIS 552
G VEL S+ K +T+D+ ++
Sbjct: 824 GDKATVELHSKNKHITIDKHKLT 846
>gi|151946151|gb|EDN64382.1| RNA polymerase II elongation factor [Saccharomyces cerevisiae
YJM789]
gi|349580275|dbj|GAA25435.1| K7_Spt5p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1063
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 161/563 (28%), Positives = 275/563 (48%), Gaps = 55/563 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 319 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPNKSD 378
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + V +K++PR+D + + ++
Sbjct: 379 DVALEEGSYVRIKRGIYKGDLAMVDQISENNLEVMLKIVPRLDYGKFDEIDPTTQQRKSR 438
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+ F PP+ N +D+A L+ R +R DY DG+LYK+
Sbjct: 439 RPTFAHRAPPQLFNPTMALRLDQA-NLYKRDDRHFTYKNEDYI---------DGYLYKSF 488
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + +NIQPT +EL +F + + G D+ S+S A K F GD + V+ G+
Sbjct: 489 RIQHVETKNIQPTVEELARFGS--KEGAVDLTSVSQSIKKAQAAKVTFQPGDRIEVLNGE 546
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
+ KG V + ++ I+ + G L L K FEPG+HV V++G G G+V
Sbjct: 547 QRGSKGIVTRTTKDIATIK--LNGFTTPLEFPISTLRKIFEPGDHVTVINGEHQGDAGLV 604
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
L VEQ + +S T ++ + A+++ +S + T + +Y L D+V L + II+
Sbjct: 605 LMVEQGQVTFMSTQTSREVTITANNLSKSIDTTATSS---EYALHDIVELSAKNVACIIQ 661
Query: 357 VESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP 412
+ F+V + + +V+ + L +I + S+V D N N + + D IVE
Sbjct: 662 AGHDIFKV---IDETGKVSTITKGSILSKINTARARVSSV-DANGNEIKIGDT--IVEKV 715
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
++G V +I +F+ + +E+AG S+ V S+ N N S+ N
Sbjct: 716 GSRREGQVLYIQTQQIFVVSKKIVENAGVFVVNPSNVEAV-ASKDNMLSNKMDLSKMN-- 772
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNR---GGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK 529
P S+ GPP+ + RGG + +G TV++R YKG G V DV
Sbjct: 773 ---------PEIISKMGPPSSKTFQQPIQSRGGREVALGKTVRIRSAGYKGQLGIVKDVN 823
Query: 530 GQSVRVELESQMKVVTVDRSMIS 552
G VEL S+ K +T+D+ ++
Sbjct: 824 GDKATVELHSKNKHITIDKHKLT 846
>gi|356574169|ref|XP_003555224.1| PREDICTED: uncharacterized protein LOC100818587 [Glycine max]
Length = 1495
Score = 192 bits (489), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 102/225 (45%), Positives = 149/225 (66%), Gaps = 6/225 (2%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK D G++L+I+S ++DH+K ++YIEA+K+ + EAC+G+ IY +V VP
Sbjct: 167 MQKFADLYSLGTKLKIKSAFSVDHMKGFVYIEAEKQYDINEACQGIPGIYVTRVAPVPNS 226
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E+ ++ +V S+ ++S W R+K GNYKGDLA+VV V+N R++VTVKLIPRIDLQALA
Sbjct: 227 EVYNLFSVRSRTPEISEGMWARIKGGNYKGDLAQVVSVNNTRKKVTVKLIPRIDLQALAA 286
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
K G +++K VP PR ++ E E ++ +RD TG FE + G++ KDG++YK
Sbjct: 287 KF-GGGYSRQKMAVPAPRLISSSELEEFRPLIQIKRDRDTGKVFEVLDGLMLKDGYVYKK 345
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGES-DIASLSTLFANRKK 221
+S S+S + PT DEL KF P EN ES D+ LS L+ ++KK
Sbjct: 346 ISPDSLSLWGVVPTEDELLKF-GPSENNESNDLEWLSQLYGDKKK 389
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 122/232 (52%), Gaps = 29/232 (12%)
Query: 338 YELRDLVLLDNNSFGVIIRVESEA-FQVLKGVPDRPEVALVKLREIKCKL-EKKSNVQDR 395
+EL DLV FGVI+ ++ + +++LK D P+ V EIK L + K D+
Sbjct: 415 FELYDLVCFGKKDFGVIVGMDKDDIYKILKEGSDGPDAVTVDRHEIKSGLFDLKLTALDQ 474
Query: 396 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGS 455
+ T+ V D VR++EGP KGKQG V+HIYRGI+F++D + E+ G++ KS+ C V
Sbjct: 475 HSKTILVNDTVRVLEGPTKGKQGIVKHIYRGIVFLYDGNEEENGGYLTCKSNKCEKV--K 532
Query: 456 RANGDRNG--------------DAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRG 501
A GD +G + S + P + ++ ++R G
Sbjct: 533 LAVGDCSGKDSEPGPLVFEDQPSSPRSPLSPKKPWQARENNREFNR-----------GDN 581
Query: 502 GHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISD 553
+ +G T+++R+GP KGY RV+ ++ V V+L+SQ KV+TV +S+
Sbjct: 582 NNMFTIGQTLRIRIGPLKGYICRVIALRRADVTVKLDSQQKVLTVKCEHLSE 633
>gi|255586801|ref|XP_002534015.1| suppressor of ty, putative [Ricinus communis]
gi|223525980|gb|EEF28368.1| suppressor of ty, putative [Ricinus communis]
Length = 1547
Score = 192 bits (488), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 146/225 (64%), Gaps = 6/225 (2%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G++LQI S ++DH+K +++IEADK+ + EACKGL +IYS +V +P
Sbjct: 188 MQKFVDLKSLGTKLQIISAFSVDHVKGFVFIEADKQCDINEACKGLCSIYSTRVAPIPKN 247
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E++ VL+V SK+ + W R+K G YKGDLA++V V++ R+R TVKLIPRIDLQALA
Sbjct: 248 EVSHVLSVRSKSNAVREGMWARVKSGKYKGDLAQIVTVNDARKRATVKLIPRIDLQALAQ 307
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
K G V+ K P PR ++ E E V+ RRD TG + E + G++ KDG+LYK
Sbjct: 308 KF-GGGVSMKNAATPAPRLISSSELEEFRPLVQHRRDRDTGLFVEVLDGLMLKDGYLYKR 366
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGESD-IASLSTLFANRKK 221
VS+ S+S + P+ +EL KF+ P EN ESD L L+ + KK
Sbjct: 367 VSVDSLSCWGVVPSEEELLKFQ-PSENTESDNTEWLKQLYGSPKK 410
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 150/306 (49%), Gaps = 19/306 (6%)
Query: 324 ESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE-SEAFQVLKGVPDRPEVALVKLREI 382
E E ++G +EL DLV FGVII +E + +++LK P+ P V V +I
Sbjct: 421 EKGESSSGSGIQHSFELYDLVCFSRKDFGVIIGMEKDDYYKILKEGPEAPVVVTVARNDI 480
Query: 383 KCK-LEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGF 441
K + + D ++V D+V++VEGP K +QG V+ IYRGI+F+HD++ E+ G+
Sbjct: 481 KKGPSDMRFTALDHRTKIISVNDMVKVVEGPLKDRQGTVKQIYRGIIFMHDQNETENGGY 540
Query: 442 ICAKSSSCVVVGGS-RANGDRNGDAYS-RFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGG 499
C+K+ C + S ++ G++ S F + + P+ P SP R + NRG
Sbjct: 541 FCSKAQLCEKIKLSFDVCNEKGGESSSFSFEDIPSSPKSPLSPKRPWQTKDNNWDFNRGE 600
Query: 500 RGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVST 559
+ G + +G T+++R+GP KGY RV+ ++ V V+++S+ K+ TV +S+
Sbjct: 601 KDGMFS-IGQTLRIRVGPLKGYLCRVLAIRYSDVTVKVDSKHKIFTVKCEHLSE------ 653
Query: 560 PYRDTPRYGMGSETPMH--PSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMS 617
G S TP+ P + P+ + G+ DG T WN +
Sbjct: 654 ------IRGKSSATPLSEDPGSSSFKPFDLLGTEGGSKGWTDGAGTSADGDRWNAGGITA 707
Query: 618 PPRDNW 623
D W
Sbjct: 708 ESEDGW 713
>gi|444319054|ref|XP_004180184.1| hypothetical protein TBLA_0D01570 [Tetrapisispora blattae CBS 6284]
gi|387513226|emb|CCH60665.1| hypothetical protein TBLA_0D01570 [Tetrapisispora blattae CBS 6284]
Length = 1068
Score = 192 bits (487), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 160/561 (28%), Positives = 269/561 (47%), Gaps = 49/561 (8%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +I+ + +L+P++E+ +L +S
Sbjct: 320 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGIPDIFITQKILIPVQELPLLLKPSKSD 379
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + V +K++PR+D + + + +
Sbjct: 380 DVSLEEGSYVRIKRGIYKGDLAVVDQISENNLEVMLKIVPRLDYGKFDEIDPVTNQRKPR 439
Query: 127 KKPFV--PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
+ F PP+ N A L +RD D+ + DG+LYK+ ++ I
Sbjct: 440 RTTFATRSPPQLFNPTMALRLDQANLYKRD----DHHFTYKNEDYIDGYLYKSYKIQHIE 495
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGDLKNLKG 242
A+NIQPT +EL +F + ++G D+ S+S A + F GD+V ++ G+ + KG
Sbjct: 496 AKNIQPTVEELARFGS--KDGNVDLTSISQAIKKAQAARVTFQAGDSVEILNGEQRGSKG 553
Query: 243 WVEKVDEENVHIR-PEMKG---LPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
V K E ++ PE P +L L K F+PG+HV VV G G G+VL
Sbjct: 554 IVTKTTTEIATVKIPEFSSALEFPISL------LRKIFKPGDHVTVVDGDHQGDAGLVLL 607
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
V++ + +S+ TKE++ + A+++ +S + T + +Y L D+V L + II+
Sbjct: 608 VKKGQVTFMSNQTKEEVTITANNLSKSIDSTPTSS---EYALYDMVELSAKNVACIIQAG 664
Query: 359 SEAFQVLKGVPDRPEVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEGPCKG 415
+ F+V + D +V+ + I K+ K D N N + + D V VE
Sbjct: 665 HDIFKV---IDDTGKVSTITKGSILNKINTARTKVTTVDNNGNEIKIGDTV--VEKLGAR 719
Query: 416 KQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTP 475
++G V +I +F+ + +E+AG + V +N SR N
Sbjct: 720 REGQVLYIETQNIFVMSKKIIENAGVFIVNQLNIEAVSSKDSNMLSTKIDLSRLN----- 774
Query: 476 PRIPQSPGRYSRGGPPAGG----RNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
P + PP G + GR G + G TV++R YKG G V DV G
Sbjct: 775 ------PDVMASMKPPGQGMRPVSQQQGRVGREVAFGKTVRIRAAGYKGQLGIVKDVNGD 828
Query: 532 SVRVELESQMKVVTVDRSMIS 552
VEL S+ K +TVD+ ++
Sbjct: 829 KATVELHSKNKHITVDKRKLT 849
>gi|367008886|ref|XP_003678944.1| hypothetical protein TDEL_0A04010 [Torulaspora delbrueckii]
gi|359746601|emb|CCE89733.1| hypothetical protein TDEL_0A04010 [Torulaspora delbrueckii]
Length = 999
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 189/703 (26%), Positives = 319/703 (45%), Gaps = 96/703 (13%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 248 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYVSQKLLIPVQELPLLLKPNKSD 307
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL------ANKLEGR 122
+ L ++VR+K G YKGDLA V + V +K++PR+D N+ + R
Sbjct: 308 DVALEEGSYVRIKRGIYKGDLAVVDQISENNLEVMLKIVPRLDYGKFDDVDPSTNQRKAR 367
Query: 123 E--VAKKKP--FVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
A + P P + +D+A L+ R + DY DG+LYK+
Sbjct: 368 RPTFAHRAPAQLFNPTMALRLDQA-NLYKRDDHHFTYRNDDYV---------DGYLYKSF 417
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + +NIQPT +EL +F + + G D+ S+S A + F GD V V+ G+
Sbjct: 418 RIQHVETKNIQPTVEELARFGS--KEGAVDLTSISQTIKKAQAARVTFQPGDRVEVLNGE 475
Query: 237 LKNLKGWVEKVDEENVHIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
+ KG V K + ++ PE P ++S L K FEPG+HV VVSG G G+
Sbjct: 476 QRGSKGIVIKTASDVATVKVPEFPTKPLEFLMSS--LRKVFEPGDHVTVVSGEHQGDAGL 533
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
VL V+ + +S+ T+E++ + A+++ +S + T ++ + L D+V L + II
Sbjct: 534 VLTVKHGQVTFMSNQTREEVTITANNLTKSIDSTPTSSQ---FALHDIVELSAKNAACII 590
Query: 356 RVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNK---NTVAVKDVVRIVEGP 412
+ + F+V + D +V+ + I K+ N + + D V +E
Sbjct: 591 QAGHDIFKV---IDDSGKVSTITKGSILNKINTARARVAAVDAGGNEIKIGDTV--MEKV 645
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
++G V +I +F+ + LE+AG + + S+ N L
Sbjct: 646 GARREGQVLYIQSQQIFVMSKKILENAGVFLVNPMNVEAIA-------------SKDNML 692
Query: 473 RTPPRIPQ-SPGRYSRGGPPAGGR----NRGGRGGHDALVGTTVKVRLGPYKGYRGRVVD 527
+ + + +P S+ GPP+ R + R G D +G TV++R YKG G V D
Sbjct: 693 SSKLDLNKINPDFVSKMGPPSQARLQQPQQQVRMGRDLALGKTVRIRSAGYKGQLGIVKD 752
Query: 528 VKGQSVRVELESQMKVVTVDRSMIS------------DNVV----------VSTPYRDTP 565
V G++ VEL S+ K +T+D+ ++ D +V + Y P
Sbjct: 753 VNGENATVELHSKNKHITIDKHRLTYYNREGGEGVTYDELVNRRGKLPQARIGPSYVSAP 812
Query: 566 RYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWED 625
R+ M + + + PL MTP + DG +TP A N + W
Sbjct: 813 RH-MATGGNLGATNQPLAGGMTPGWSS-----FDGGKTP----AVNSHGAGGGGASTW-- 860
Query: 626 GNPGSWGTSPQY--QPGSPPSR---AYEAPTPGSGWASTPGGN 663
G+ +WG + + QP S A G+G ST GGN
Sbjct: 861 GSTSTWGGASAWGGQPAGGASSWGGASAWNGQGTGATSTWGGN 903
>gi|366996310|ref|XP_003677918.1| hypothetical protein NCAS_0H02610 [Naumovozyma castellii CBS 4309]
gi|342303788|emb|CCC71571.1| hypothetical protein NCAS_0H02610 [Naumovozyma castellii CBS 4309]
Length = 965
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 158/561 (28%), Positives = 275/561 (49%), Gaps = 49/561 (8%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 243 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYINQKLLIPVQELPLLLKPNKSD 302
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID------LQALANKLEGR 122
+ L+ +VR+K G YKGDLA V + V +K+IPR+D + + N+ + R
Sbjct: 303 DVSLAEGNYVRIKRGIYKGDLAMVDQISENNLEVMLKMIPRLDYGKFDEIDPVTNQRKPR 362
Query: 123 EVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKS 182
PPP+ N A L +RD D+ + DG+LYK+ ++
Sbjct: 363 RATY--AHRPPPQLFNPTMALRLDQANLYKRD----DHHFTYKNDDYIDGYLYKSFRIQY 416
Query: 183 ISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH--FMKGDAVIVIKGDLKNL 240
+ +NIQPT +EL +F + ++G D+ S+S + F GD V ++ G+ +
Sbjct: 417 VETKNIQPTVEELARFGS--KDGAVDLTSISQAIKKAQAAQVTFQPGDRVEILNGEQRGS 474
Query: 241 KGWVEKVDEENVHIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
KG + + +R P + P + S L K FEPG+HV V+SG G G+VL V
Sbjct: 475 KGIIVSTTTDIATVRLPNYQYKPLEFPILS--LRKIFEPGDHVTVISGEHEGDAGLVLMV 532
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
+Q + +S+ T+E++ + A+++ +S + T + +Y L D+V L + II+
Sbjct: 533 KQGQVTFMSNQTREEVTITANNLSKSIDSTPTSS---EYALHDIVELSAKNVACIIQAGH 589
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEGPCKGK 416
+ F+V + + +V+ + I K++ + D N N V + D V VE +
Sbjct: 590 DIFKV---IDETGKVSTITKGSILNKVDTARARVTTVDGNGNEVKIGDSV--VEKLGARR 644
Query: 417 QGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPP 476
+G V +I +FI + +E+AG ++ V S+ N L +
Sbjct: 645 EGQVLYIQTQQIFIVSKKIIENAGVFVVNPANVEAVS-------------SKENILNSKL 691
Query: 477 RIPQ-SPGRYSRGGPPAGG----RNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
+ + +P S GPP+ + + R G + +G TV++R YKG G V DV G+
Sbjct: 692 DLNKMNPDIVSTMGPPSSSQPMIKPQQSRMGREVALGKTVRIRSAGYKGQLGIVKDVNGE 751
Query: 532 SVRVELESQMKVVTVDRSMIS 552
VEL S+ K +TVD+ ++
Sbjct: 752 KATVELHSKNKHITVDKHKLA 772
>gi|353241383|emb|CCA73202.1| related to SPT5-transcription elongation protein [Piriformospora
indica DSM 11827]
Length = 680
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 144/430 (33%), Positives = 221/430 (51%), Gaps = 35/430 (8%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
KG+ LQI S + YIY+E+ + V AC L I+ + +LVPI EM +L ++
Sbjct: 198 KGNPLQIISAFERTSIPGYIYVESRSKEAVISACSNLVGIFRRDPILVPIGEMAPLLQLK 257
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
K L WVR+K G Y+GDLA+V+DV + + ++ +PRIDL + EG + A
Sbjct: 258 QKEFTLQPGAWVRLKRGKYQGDLAQVMDVTDTGEEAGIRFLPRIDLTP--REFEGGDGSA 315
Query: 126 KKKPFV------PPPRFMNVDEARELH-IRVERRRDP---MTGDYFENIGGMLFKDGFLY 175
K+K V PP R N +E +++ + RR P GD + N GFL
Sbjct: 316 KRKRAVAATVGRPPARPFNPEEVLKVYGKKTTIRRGPSWIFNGDTYTN--------GFLE 367
Query: 176 KTVSMKSISAQNIQPTFDELEKFRTPGENGES--------DIASLSTLFANRKKGHFMKG 227
K V + ++ +N+QP DEL F G++GE ++ASL+ G
Sbjct: 368 KDVRVSALVTENVQPRLDELSAFLGDGKDGEKAAGGDGALNLASLAAEIRRPIMVALQPG 427
Query: 228 DAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP--KTLAVNSKELCKYFEPGNHVKVV 285
D V V +G+ +G V+ V + V IR E L T+ V ++ + K F PG+HVKV+
Sbjct: 428 DQVEVYQGEQIGTRGIVDSVLGDIVTIRGEGLELEGKMTIEVPARHVRKRFSPGDHVKVM 487
Query: 286 SGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVL 345
+G TGMVL V ++ +SD T+ +I VF+ D+ ++EV + +G+YEL DLV
Sbjct: 488 AGVNTDETGMVLSVNGDLVTFMSDLTESEITVFSKDLRTAAEVGSSSNVVGNYELHDLVQ 547
Query: 346 LDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKD 404
LD + GVI R E ++F+VL + LV+ +I + + + V D N + V D
Sbjct: 548 LDMQTVGVIYRTERDSFRVLD---QHGQTRLVQPHQITMRKDSRRAVSTDAEGNELRVGD 604
Query: 405 VVRIVEGPCK 414
V+ V+G +
Sbjct: 605 NVKEVDGEVR 614
>gi|67623669|ref|XP_668117.1| spt5-like transcription initiation protein [Cryptosporidium hominis
TU502]
gi|54659311|gb|EAL37894.1| spt5-like transcription initiation protein [Cryptosporidium
hominis]
Length = 821
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 164/566 (28%), Positives = 262/566 (46%), Gaps = 51/566 (9%)
Query: 3 KCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDV 62
+C +G EL I S + YIY+EA+ V EA +G + + ++P++EMT V
Sbjct: 87 ECQKQGKELPILSAYVASSYRGYIYVEAEAPNFVNEALQGFTGVRLSSIKIIPVKEMTRV 146
Query: 63 LAVESKAID-LSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE- 120
+V+ + + L R++WVR++ G Y GDLA++ +VD V ++L+PR+D+ AL K +
Sbjct: 147 FSVDMQEKEQLMRESWVRVRSGIYGGDLAQIYEVDEHEANVILRLVPRLDVPALIRKSQN 206
Query: 121 GREVAKKKPFV-PPPRFMNVDEARELHIRVE----RRRDPMTGDYFENIGGMLFKDGFLY 175
++V+ K + PP + + D+ L VE R FE G L K
Sbjct: 207 SQDVSFSKSRIRPPAKLFDRDKVESLGGVVELTHLRGTVKFANQLFEQEKGYLLK----- 261
Query: 176 KTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKG 235
K + + + +QPT +E+++F + E +I S TL +K F GD V + +G
Sbjct: 262 KMKANRLVVGDAVQPTIEEIKRFFGVSDLSEVNIDS-KTLLKTQKSTSFFVGDTVTITRG 320
Query: 236 DLKNLKGWVEKVDEENVHIRPEMKGLP--KTLAVNSKEL------CKYFEPGNHVKVVSG 287
+L +K V V N I ++ LP K+L + L CK F+ G+ V++V G
Sbjct: 321 ELIGIKAKVVAV---NSGINKSLEVLPIDKSLGITEPILTQVDLVCKSFDVGDSVQIVEG 377
Query: 288 TQAGATGMVLKVEQH--VLIILSDTTKEDIRV---FADDVVESSEVTTGITKIGDYELRD 342
G +G+V +Q+ V II + IR F V + VT+G++ + + L D
Sbjct: 378 VNEGESGLVTSFDQNYTVAIIYPLNGAQPIRCPTNFLKKVSQDVVVTSGLSTVDGFSLDD 437
Query: 343 LVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKK--SNVQDRNKNTV 400
LV L N GVI+ V + L+ + E +K EI K + D N N
Sbjct: 438 LVQLYNGKVGVIVFVGRN--KNLRLLTSTGETITIKSSEISSKRNTSLMHRIPDHNGNIF 495
Query: 401 AVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGD 460
VK V+I+EG GK G VEHI++ FI + L+ G+ + + + + +
Sbjct: 496 GVKSTVQILEGANSGKSGKVEHIWKSTCFIKLQSKLDDGGYFTCEGRQLLTLKTAES--- 552
Query: 461 RNGDAYSRFNSLRTPPRIPQ--------SPGRYSRGGPPAGGRNRGGRGGHDALVGTTVK 512
SR ++ P P+ S G Y R NR G G DA + V+
Sbjct: 553 ------SRMDAAIKPTNGPKKGNSGGGNSGGGYRRVYGMGLHSNRRG-GPDDAFINQKVR 605
Query: 513 VRLGPYKGYRGRVVDVKGQSVRVELE 538
+ G +K G + KG +V V L+
Sbjct: 606 ILRGKHKALLGSIRGFKGNNVEVLLD 631
>gi|17861616|gb|AAL39285.1| GH15359p [Drosophila melanogaster]
Length = 462
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 147/473 (31%), Positives = 236/473 (49%), Gaps = 32/473 (6%)
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLK 238
M +I + ++PT ELE+F E E ++ + T+ + H F GD V V GDL+
Sbjct: 1 MSAILSDGVKPTLAELERFEESPE--EVNLEIMGTVKDDPTMAHSFSMGDNVEVCVGDLE 58
Query: 239 NLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
NL+ + +D + + P+ + L L + EL KYF+ G+H +V++G G TG++++
Sbjct: 59 NLQAKIVAIDGTMITVMPKHQDLKDPLIFKASELRKYFKTGDHARVLAGRYEGETGLIIR 118
Query: 299 VEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVE 358
VE ++++SD T ++ V D+ S+V TG+ +G ++ D+V LD+ + GVI+R+E
Sbjct: 119 VEPTRVVLVSDLTNHELEVLPRDLQLCSDVATGVDCLGQFQWGDMVQLDSQNVGVIVRLE 178
Query: 359 SEAFQVL----KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCK 414
E F VL K + +P AL K +E + + D ++N + +DVV+++EGP
Sbjct: 179 RENFHVLGMNGKCIECKP-TALHKRKE-----NRHTVALDADQNQIRRRDVVKVMEGPHA 232
Query: 415 GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR-FNSLR 473
G+ G ++H+YR + F+H R + E+ G K+ + GGS+ G F S
Sbjct: 233 GRSGEIKHLYRSLAFLHCRMYTENGGIFVCKTRHLQLAGGSKTTVSNAGIVGGLGFMS-- 290
Query: 474 TPPRI--PQSPGRYSRGGPPAGGRNRGGRGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKG 530
PRI P P A G G R D ++G T+K+ GPYKG G V D
Sbjct: 291 --PRIQSPMHPSGGRGARGGARGGRGGFRVTRDREILGKTIKISGGPYKGAVGIVKDATE 348
Query: 531 QSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMR 590
+ RVEL + + ++VDR+ I+ +V T + G S P+RTP + TP
Sbjct: 349 STARVELHTSCQTISVDRNHIA---IVGV----TGKEGSVSTYGRTPARTPGYGAQTPSY 401
Query: 591 DAGA--TPIHDGMRTPMRDR-AWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPG 640
A TP+ G +TP D PY M+P D G+ ++ G
Sbjct: 402 TAAGSKTPL-VGSQTPNWDTDTRTPYGTMTPIARWQHDTTSWRLGSHGKHNAG 453
>gi|356534382|ref|XP_003535734.1| PREDICTED: putative transcription elongation factor SPT5 homolog
2-like [Glycine max]
Length = 712
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/232 (44%), Positives = 152/232 (65%), Gaps = 6/232 (2%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK D G++L+I+S A+DH+K ++YIEA+K+ + EAC+G+ IY +V VP
Sbjct: 166 MQKFADLDSLGTKLKIKSAFAVDHMKGFVYIEAEKQYDINEACQGIPGIYVTRVAPVPNS 225
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E+ + +V S+ ++S W R+K GNYKGDLA+VV V+N R++VTVKLIPRIDLQALA
Sbjct: 226 EVYHLFSVRSRTPEISEGMWARIKGGNYKGDLAQVVSVNNTRKKVTVKLIPRIDLQALAA 285
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
K G +++K VP PR ++ E E ++ +RD TG FE + G++ KDG++YK
Sbjct: 286 KFGG-GYSRQKMAVPAPRLISSSELEEFRPLIQIKRDRDTGKVFEVLDGLMLKDGYVYKK 344
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGES-DIASLSTLFANRKKGHFMKGD 228
VS+ S+S + PT +EL KF P EN ES D+ LS L+ ++KK ++ D
Sbjct: 345 VSLDSLSLWGVVPTEEELLKF-GPCENNESNDLEWLSQLYGDKKKKRVIRPD 395
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 119/221 (53%), Gaps = 7/221 (3%)
Query: 338 YELRDLVLLDNNSFGVIIRVESE-AFQVLKGVPDRPEVALVKLREIKCKL-EKKSNVQDR 395
+EL DLV FGVI+ ++ + +++LK D P ++ EIK L + K D+
Sbjct: 414 FELYDLVCFGKKDFGVIVGMDKDDIYKILKEGSDGPAAVTIERHEIKSGLFDLKLTALDQ 473
Query: 396 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGS 455
T+ V D VR++EGP KGKQG V+HIYRGI+F++D + E+ G++ KS+ C V
Sbjct: 474 QSKTILVNDTVRVLEGPSKGKQGIVKHIYRGIVFLYDGNEEENGGYLTCKSNMCEKV--K 531
Query: 456 RANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRG-GRGGHDAL--VGTTVK 512
A GD +G + + A NR RG ++ + +G T++
Sbjct: 532 VAVGDCSGKDSEPAPLVFEDQPSSPRSPLSPKKPWQARENNREFNRGDNNNMFSIGQTLR 591
Query: 513 VRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISD 553
+R+GP KGY RV+ ++ V V+L+SQ KV+TV +S+
Sbjct: 592 IRIGPLKGYICRVIALRRADVTVKLDSQQKVLTVKCEHLSE 632
>gi|32399041|emb|CAD98281.1| spt5-like transcription initiation protein, possible
[Cryptosporidium parvum]
Length = 968
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 162/565 (28%), Positives = 259/565 (45%), Gaps = 49/565 (8%)
Query: 3 KCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDV 62
+C +G EL I S + YIY+EA+ V EA +G + + ++P++EMT V
Sbjct: 234 ECQKQGKELPILSAYVASSYRGYIYVEAEAPNFVNEALQGFTGVRLSSIKIIPVKEMTRV 293
Query: 63 LAVESKAID-LSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE- 120
+V+ + + L R++WVR++ G Y GDLA++ +VD V ++L+PR+D+ AL K +
Sbjct: 294 FSVDMQEKEQLMRESWVRVRSGIYGGDLAQIYEVDEHEANVILRLVPRLDVPALIRKSQN 353
Query: 121 GREVAKKKPFV-PPPRFMNVDEARELHIRVE----RRRDPMTGDYFENIGGMLFKDGFLY 175
++V+ K + PP + + D+ L VE R FE G L K
Sbjct: 354 SQDVSFSKSRIRPPAKLFDRDKVESLGGVVELTHLRGTVKFANQLFEQEKGYLLK----- 408
Query: 176 KTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKG 235
K + + + +QPT +E+++F + E +I S TL +K F GD V + +G
Sbjct: 409 KMKANRLVVGDAVQPTIEEIKRFFGVSDLSEVNIDS-KTLLKTQKSTSFFVGDTVTITRG 467
Query: 236 DLKNLKGWVEKVDEENVHIRPEMKGLP--KTLAVNSKEL------CKYFEPGNHVKVVSG 287
+L +K V V N I ++ LP K+L + L CK F+ G+ V++V G
Sbjct: 468 ELIGIKAKVVAV---NSGINKSLEVLPIDKSLGITEPILTQVDLVCKSFDIGDSVQIVEG 524
Query: 288 TQAGATGMVLKVEQH--VLIILSDTTKEDIRV---FADDVVESSEVTTGITKIGDYELRD 342
G +G+V +Q+ V II + IR F V + VT+G++ + + L D
Sbjct: 525 VNEGESGLVTSFDQNYTVAIIYPLNGAQPIRCPTNFLKKVSQDVVVTSGLSTVDGFSLDD 584
Query: 343 LVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKK--SNVQDRNKNTV 400
LV L N GVI+ V + L+ + E +K EI K + D N N
Sbjct: 585 LVQLYNGKVGVIVFVGRN--KNLRLLTSTGESITIKSSEISSKRNTSLMHRIPDHNGNIF 642
Query: 401 AVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGD 460
VK V+I+EG GK G VEHI++ FI L+ G+ + + + + +
Sbjct: 643 GVKSTVQILEGANSGKSGKVEHIWKSTCFIKLPSKLDDGGYFTCEGRQLLTLKTAES--- 699
Query: 461 RNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRG------GRGG-HDALVGTTVKV 513
SR ++ P P+ GR G RGG DA + V++
Sbjct: 700 ------SRMDAATKPTNGPKKGNSGGGNSGGGYGRVYGMGLHSNRRGGPDDAFINQKVRI 753
Query: 514 RLGPYKGYRGRVVDVKGQSVRVELE 538
G +K G + KG +V V L+
Sbjct: 754 LRGKHKALLGSIRGFKGNNVEVLLD 778
>gi|66475956|ref|XP_627794.1| 5kows transcription initiation protein SPT5 [Cryptosporidium parvum
Iowa II]
gi|46229321|gb|EAK90170.1| 5kows transcription initiation protein SPT5 [Cryptosporidium parvum
Iowa II]
Length = 888
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 162/565 (28%), Positives = 259/565 (45%), Gaps = 49/565 (8%)
Query: 3 KCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDV 62
+C +G EL I S + YIY+EA+ V EA +G + + ++P++EMT V
Sbjct: 154 ECQKQGKELPILSAYVASSYRGYIYVEAEAPNFVNEALQGFTGVRLSSIKIIPVKEMTRV 213
Query: 63 LAVESKAID-LSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE- 120
+V+ + + L R++WVR++ G Y GDLA++ +VD V ++L+PR+D+ AL K +
Sbjct: 214 FSVDMQEKEQLMRESWVRVRSGIYGGDLAQIYEVDEHEANVILRLVPRLDVPALIRKSQN 273
Query: 121 GREVAKKKPFV-PPPRFMNVDEARELHIRVE----RRRDPMTGDYFENIGGMLFKDGFLY 175
++V+ K + PP + + D+ L VE R FE G L K
Sbjct: 274 SQDVSFSKSRIRPPAKLFDRDKVESLGGVVELTHLRGTVKFANQLFEQEKGYLLK----- 328
Query: 176 KTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKG 235
K + + + +QPT +E+++F + E +I S TL +K F GD V + +G
Sbjct: 329 KMKANRLVVGDAVQPTIEEIKRFFGVSDLSEVNIDS-KTLLKTQKSTSFFVGDTVTITRG 387
Query: 236 DLKNLKGWVEKVDEENVHIRPEMKGLP--KTLAVNSKEL------CKYFEPGNHVKVVSG 287
+L +K V V N I ++ LP K+L + L CK F+ G+ V++V G
Sbjct: 388 ELIGIKAKVVAV---NSGINKSLEVLPIDKSLGITEPILTQVDLVCKSFDIGDSVQIVEG 444
Query: 288 TQAGATGMVLKVEQH--VLIILSDTTKEDIRV---FADDVVESSEVTTGITKIGDYELRD 342
G +G+V +Q+ V II + IR F V + VT+G++ + + L D
Sbjct: 445 VNEGESGLVTSFDQNYTVAIIYPLNGAQPIRCPTNFLKKVSQDVVVTSGLSTVDGFSLDD 504
Query: 343 LVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKK--SNVQDRNKNTV 400
LV L N GVI+ V + L+ + E +K EI K + D N N
Sbjct: 505 LVQLYNGKVGVIVFVGRN--KNLRLLTSTGESITIKSSEISSKRNTSLMHRIPDHNGNIF 562
Query: 401 AVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGD 460
VK V+I+EG GK G VEHI++ FI L+ G+ + + + + +
Sbjct: 563 GVKSTVQILEGANSGKSGKVEHIWKSTCFIKLPSKLDDGGYFTCEGRQLLTLKTAES--- 619
Query: 461 RNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRG------GRGG-HDALVGTTVKV 513
SR ++ P P+ GR G RGG DA + V++
Sbjct: 620 ------SRMDAATKPTNGPKKGNSGGGNSGGGYGRVYGMGLHSNRRGGPDDAFINQKVRI 673
Query: 514 RLGPYKGYRGRVVDVKGQSVRVELE 538
G +K G + KG +V V L+
Sbjct: 674 LRGKHKALLGSIRGFKGNNVEVLLD 698
>gi|449465322|ref|XP_004150377.1| PREDICTED: uncharacterized protein LOC101208989 [Cucumis sativus]
Length = 1690
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 141/220 (64%), Gaps = 4/220 (1%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G++LQI+S ++H+K +IY+EA ++ + EACKG+ IYS +V VP
Sbjct: 158 MQKFVDLHSFGNKLQIKSAFCVEHVKGFIYVEAPRQYDLIEACKGITGIYSTRVASVPEN 217
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
+++ +L+V S+ +++ T R+K G YKGDLA++V V+N R+R TVKL+PRIDLQA+A
Sbjct: 218 DISQLLSVRSRVSEVTVGTMARVKNGKYKGDLAQIVAVNNARKRATVKLVPRIDLQAMAE 277
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
K G AKK P PR +N E E ++ RRD TG FE + GM+ KDG+LYK
Sbjct: 278 KFGGGAAAKKTA-NPAPRLINSSELAEFRPLMQFRRDRETGKLFEFLDGMMLKDGYLYKK 336
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFA 217
+S+ S+S + P+ DEL KF+ N +D+ LS L+
Sbjct: 337 ISLDSLSCWGVMPSEDELLKFKPSESNESNDLEWLSQLYG 376
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 120/228 (52%), Gaps = 15/228 (6%)
Query: 335 IGDYELRDLVLLDNNSFGVIIRV--ESEAFQVLKGVPDRPEVALVKLREIKC-KLEKKSN 391
GD+ +LV FG+I+ + +++++LK PD V V+ +E+K L+ K
Sbjct: 407 FGDH---NLVCFGRKDFGMILGTSEKDDSYKILKDSPDGSVVVNVQRKELKSGALDAKFT 463
Query: 392 VQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVV 451
D N ++V D V+++EG K KQG V+H+YR LF++D + +++ G+ C KS+ C
Sbjct: 464 AADHNGKIISVSDNVKVLEGSLKDKQGIVKHVYRHTLFVYDENEVDNDGYFCCKSNMCEK 523
Query: 452 VG------GSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDA 505
+ G + D+ + F+S P P+ P G NR R
Sbjct: 524 IKISYDVPGGKVEDDKGFSGFEDFSSSPKSPLSPKKPWAEKETGRE---YNRDDRADGMF 580
Query: 506 LVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISD 553
+G T+++R+GP KGY RV+ V+ + V V+L+SQ KV+TV +S+
Sbjct: 581 SIGQTLRIRVGPLKGYLCRVIAVRKRDVTVKLDSQQKVLTVRSDFLSE 628
>gi|401624358|gb|EJS42418.1| spt5p [Saccharomyces arboricola H-6]
Length = 1060
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 159/563 (28%), Positives = 273/563 (48%), Gaps = 55/563 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L++ S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 316 KLKVLSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPNKSD 375
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + V +K++PR+D + + ++
Sbjct: 376 DVALEEGSYVRIKRGIYKGDLAMVDQISENNLEVMLKIVPRLDYGKFDEIDPTTQQRKSR 435
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+ F PP+ N +D+A L+ R +R DY DG+LYK+
Sbjct: 436 RPTFAHRAPPQLFNPTMALRLDQA-NLYKRDDRHFTYKNEDYI---------DGYLYKSF 485
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + +NIQPT +EL +F + + G D+ S+S A K F GD + V+ G+
Sbjct: 486 RIQHVETKNIQPTVEELARFGS--KEGAVDLTSVSQSIKKAQAAKVTFQPGDRIEVLNGE 543
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
+ KG V + ++ I+ + G L L K FEPG+HV V++G G G+V
Sbjct: 544 QRGSKGIVTRTTKDIATIK--LNGFTTPLEFPISTLRKIFEPGDHVTVINGEHQGDAGLV 601
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
L VE + +S T ++ + A+++ +S + T + +Y L D+V L + II+
Sbjct: 602 LLVEHGQVTFMSTQTSREVTITANNLSKSIDTTATSS---EYALHDIVELSAKNVACIIQ 658
Query: 357 VESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP 412
+ F+V + + +V+ + L +I + S+V D N N V + D IVE
Sbjct: 659 AGHDIFKV---IDETGKVSTITKGSILSKINTARSRVSSV-DANGNEVKIGDT--IVEKV 712
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
++G V +I +F+ + +E+AG S+ V S+ N N S+ N
Sbjct: 713 GSRREGQVLYIQTQQIFVVSKKIVENAGVFVVNPSNVEAV-ASKDNMLSNQMDLSKMN-- 769
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNR---GGRGGHDALVGTTVKVRLGPYKGYRGRVVDVK 529
P S+ GPP+ + R G + +G TV++R YKG G V DV
Sbjct: 770 ---------PEIVSKMGPPSSKTFQQPIQSRMGREVALGKTVRIRSAGYKGQLGIVKDVN 820
Query: 530 GQSVRVELESQMKVVTVDRSMIS 552
G VEL S+ K +T+D+ ++
Sbjct: 821 GDKATVELHSKNKHITIDKHKLT 843
>gi|410078179|ref|XP_003956671.1| hypothetical protein KAFR_0C05450 [Kazachstania africana CBS 2517]
gi|372463255|emb|CCF57536.1| hypothetical protein KAFR_0C05450 [Kazachstania africana CBS 2517]
Length = 982
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 177/636 (27%), Positives = 300/636 (47%), Gaps = 79/636 (12%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ ++ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 244 KLKILSIFQRENYHGRIYIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPNKSD 303
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID------LQALANKLEGR 122
+ L +VR+K G YKGDLA V + V +K++PR+D + + N+ + R
Sbjct: 304 DVSLEAGNYVRIKRGVYKGDLAMVDQISENNLEVLLKIVPRLDYGKFDEIDPVTNQRKPR 363
Query: 123 EV--AKKKP--FVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
A + P P + +D+A L R ER DY DG+L+K+
Sbjct: 364 RATFAHRSPPQLFNPTMALRLDQA-NLFKRDERHFTYKNEDYI---------DGYLFKSY 413
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + ++IQPT +EL +F + ++G D+ ++S + K F GD V ++ G+
Sbjct: 414 RIQYVETKSIQPTVEELARFGS--KDGTVDLTNISQTIKKSQASKITFQPGDRVEILTGE 471
Query: 237 LKNLKGWVEKVDEENVHIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
+ KG V K + ++ PE P +++ L K FEPG+HV V++G G G+
Sbjct: 472 QRGSKGIVTKTTTDIATVKLPEFPLKPLEFPIST--LRKIFEPGDHVAVINGDHQGDAGL 529
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
VL V + + +S+ T++++ + A+++ +S + T + DY L ++ L S II
Sbjct: 530 VLMVNRGQVTFMSNQTRQEVTITANNLSKSIDSTPTSS---DYSLHAIIELSAKSVACII 586
Query: 356 RVESEAFQVLKGVPDRPEVALVKLREIKCKLE-KKSNVQ--DRNKNTVAVKDVVRIVEGP 412
+ + F+VL + +V + I K+E K V D N N + + D+ IVE
Sbjct: 587 QAGHDIFKVLD---EYGKVLTITKDSILRKIEPSKVRVATVDSNGNEIKIGDL--IVETL 641
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
++G V I +F+ + +E+AG SS+ V S+ N + +R N
Sbjct: 642 GARREGQVLFIQNQQVFVVSKKIIENAGVFVVNSSNIEAVA-SKDNILNDKLDLTRLN-- 698
Query: 473 RTPPRIPQSPGRYSRGGPP-AGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
P S+ GPP AG + R G + +G TV++R YKG G V DV G
Sbjct: 699 ---------PNVISKMGPPSAGAPAQNLRMGREVAIGKTVRIRSAGYKGQLGIVKDVNGD 749
Query: 532 SVRVELESQMKVVTVDRSMIS------------DNVV----------VSTPYRDTPRY-G 568
VEL S+ K +++D+ ++ D +V + Y TPR+
Sbjct: 750 KATVELHSKNKHISIDKRKLTYYNREGGEGITYDELVSRRGRVPQAKIGPSYVSTPRHMA 809
Query: 569 MGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTP 604
G E P P + MTP G DG +TP
Sbjct: 810 AGREFPSGPGQGVTAGGMTP----GWNNSFDGGKTP 841
>gi|451852234|gb|EMD65529.1| hypothetical protein COCSADRAFT_306692 [Cochliobolus sativus
ND90Pr]
Length = 1023
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 146/546 (26%), Positives = 267/546 (48%), Gaps = 39/546 (7%)
Query: 25 YIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM-KI 82
++Y+EAD + V E +G++N++ +P +E D+L + +A L +VRM +
Sbjct: 248 FLYVEADSKQAVVELIEGIQNVFMGSGQFSIPPKERPDLLRKKKRA-PLEVGKFVRMLRP 306
Query: 83 GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFV------PPPRF 136
YKGDLAKVV+V V+L+PR+D + + +K+ F PP +
Sbjct: 307 PTYKGDLAKVVEVSTNGLDCVVQLVPRLDYGLNDDANAAGDNKRKRGFFGRQTERPPAKL 366
Query: 137 MNVDEARELHIRVERRRDPMTGDYFE---NIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
N EA++ H++ MTG + G +++GFL K V + +S + + P +
Sbjct: 367 FNEAEAKKRHMK----HLSMTGSGNQRAYTYKGEDYQNGFLIKEVKVNWVSTEKVNPKME 422
Query: 194 ELEKFRTPGENGESDIASLSTLFANRKK---GHFMKGDAVIVIKGDLKNLKGWVEKVDEE 250
EL+ F +G + L+ A + F GD V + G+ K ++G V +
Sbjct: 423 ELQFFSVQNADGTETMDLLAVQAAQKAADSGSAFAAGDNVEIYTGEQKGIRGTTVTVTGD 482
Query: 251 NVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLII 306
V +R E++G + + K L K F G+HVKV+ G++ G+V +++ + +
Sbjct: 483 IVTLRVSEGELRG--RRIDAPVKTLRKLFRDGDHVKVIGGSKYVDEVGLVTRIKDDKITL 540
Query: 307 LSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLK 366
L D+T+++I VF+ D+ +++ + + +++L D V +D ++ G ++RV+ E +++
Sbjct: 541 LCDSTQQEITVFSKDLKRAAD-SANVGADSNFDLYDFVQIDASTIGCVVRVDREVLRIVD 599
Query: 367 GVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRG 426
D + ++ +I + K + DR+ + + +D V+ E +G+QG V +I+RG
Sbjct: 600 QQGDVRTLLHTQVSQIVGR-NKHAVATDRDGSEIRHEDDVK--EHGGEGRQGKVLYIHRG 656
Query: 427 ILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYS 486
LF+ +R +E+ G +S++ V + G S N P + +
Sbjct: 657 TLFVRNRELVENQGIFVVRSNNVVTMAAKSGRAQAQGPDLSGIN-----PALNAGANGNA 711
Query: 487 RGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTV 546
PP R GR D L+G TV +R G YKG G V D R+EL ++ K V+V
Sbjct: 712 NAMPPP--RASFGR---DKLIGKTVTIRKGAYKGLLGIVKDTMNDEARIELHTKNKQVSV 766
Query: 547 DRSMIS 552
+ +++
Sbjct: 767 KKELLT 772
>gi|169596208|ref|XP_001791528.1| hypothetical protein SNOG_00859 [Phaeosphaeria nodorum SN15]
gi|160701253|gb|EAT92354.2| hypothetical protein SNOG_00859 [Phaeosphaeria nodorum SN15]
Length = 1622
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 182/701 (25%), Positives = 316/701 (45%), Gaps = 93/701 (13%)
Query: 25 YIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM-KI 82
Y+Y+EAD + + + G+ N++ + ++E D+L + +A L + +VRM +
Sbjct: 855 YLYVEADTQQAMVDIIDGVTNVFMGSGQTAISVKERPDLLRKKKRA-PLEQGKFVRMLRP 913
Query: 83 GNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-------QALANK-----LEGREVAKKKPF 130
YKGDLAK+V+V + V+L+PR+D A NK GR V +
Sbjct: 914 PTYKGDLAKIVEVGSNGLDCVVQLVPRLDYGLNEDANAAADNKRKRGGFFGRNVER---- 969
Query: 131 VPPPRFMNVDEARELHIRV-------ERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
PP + + EA++ H++ + R GD ++N GFL K V + +
Sbjct: 970 -PPAKLFSDTEAKKRHMKHLTMSGSGQARTYHYKGDDYQN--------GFLIKDVKVNWV 1020
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH---FMKGDAVIVIKGDLKNL 240
S + + P +EL+ F +G + L+ A + + F +GD V + G+ K +
Sbjct: 1021 STERVNPKMEELQFFSIQNADGTETLDLLAVQAAQKASENGSAFAQGDNVEIYTGEQKGI 1080
Query: 241 KGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMV 296
+G V + + +R E++G + + K L K F G+HVKV+ G++ G+V
Sbjct: 1081 RGTTVTVVGDILTLRVTDGELRG--RKIDAPVKTLRKLFREGDHVKVIGGSRYVDEVGLV 1138
Query: 297 LKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
K+ + +LSD+T+ +I VF+ D+ +++ T + +++L DLV +D ++ G ++R
Sbjct: 1139 TKIRDDKITLLSDSTQAEITVFSKDLKRAADSAT-VGADSNFDLYDLVQIDASTIGCVVR 1197
Query: 357 VESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGK 416
V+ E +V+ D + ++ ++ + K + DR+ + + D V+ G + +
Sbjct: 1198 VDREVLKVVDQQGDVRTLLHTQVSQVMGR-NKHAVATDRDGSEIRHDDDVKEFSG--ENR 1254
Query: 417 QGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPP 476
QG V +I+RG LF+ +R +E+ G +SS+ V + G S N P
Sbjct: 1255 QGKVIYIHRGTLFVRNRELVENQGIFVVRSSNVVTMAAKSGRAQAQGPDLSGLN----PA 1310
Query: 477 RIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVE 536
Q+ + PP RN G D L+G TV +R G YKG G V D R+E
Sbjct: 1311 LNAQNGNAGAAMAPP---RNLG----RDKLIGKTVVIRKGAYKGLLGIVKDTMNDEARIE 1363
Query: 537 LESQMKVVTVDRSMISDNVVVSTPYR-DTPRYGMGSETPMHPSRTPLHPYMTPMRDAGAT 595
L ++ K ++V + +++ + P + +G G P + +G+T
Sbjct: 1364 LHTKNKQISVKKELLT----IKDPITGNNMEFGSGK-----------FPNRSRGGFSGST 1408
Query: 596 PIHD-GMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPG- 653
P H+ G RTP AW ++ G+ SWG++P TPG
Sbjct: 1409 PSHNGGGRTP----AWG---------NSSGRGSAPSWGSTPAGGRTPGWGGGSGGRTPGW 1455
Query: 654 ---SGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGG 691
G + GG+ S D S T + Y ST G
Sbjct: 1456 GGDGGRTAYGGGDGSRTAYGGDGSRTAYGGATAYGGSTSYG 1496
>gi|451997446|gb|EMD89911.1| hypothetical protein COCHEDRAFT_1178001 [Cochliobolus
heterostrophus C5]
Length = 1021
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 145/544 (26%), Positives = 264/544 (48%), Gaps = 35/544 (6%)
Query: 25 YIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM-KI 82
++Y+EAD + V E +G++N++ +P +E D+L + +A L +VRM +
Sbjct: 248 FLYVEADSKQAVVELIEGIQNVFMGSGQFSIPPKERPDLLRKKKRA-PLEVGKFVRMLRP 306
Query: 83 GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFV------PPPRF 136
YKGDLAKVV+V V+L+PR+D + + +K+ F PP +
Sbjct: 307 PTYKGDLAKVVEVSTNGLDCVVQLVPRLDYGLNDDANAAADNKRKRGFFGRQTERPPAKL 366
Query: 137 MNVDEARELHIRVERRRDPMTGDYFE---NIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
N EA++ H++ MTG + G +++GFL K V + +S + + P +
Sbjct: 367 FNEAEAKKRHMK----HLSMTGSGNQRAYTYKGEDYQNGFLIKEVKVNWVSTEKVNPKME 422
Query: 194 ELEKFRTPGENGESDIASLSTLFANRKK---GHFMKGDAVIVIKGDLKNLKGWVEKVDEE 250
EL+ F +G + L+ A + F GD V + G+ K ++G V +
Sbjct: 423 ELQFFSVQNADGTETMDLLAVQAAQKAADSGSAFAAGDNVEIYTGEQKGIRGTTVTVTGD 482
Query: 251 NVHIRPEMKGL-PKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILS 308
V +R L + + K L K F G+HVKV+ G++ G+V +++ + +L
Sbjct: 483 IVTLRVSEGDLRGRRIDAPVKTLRKLFRDGDHVKVIGGSKYVDEVGLVTRIKDDKITLLC 542
Query: 309 DTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGV 368
D+T+++I VF+ D+ +++ + + +++L D V +D ++ G ++RV+ E +++
Sbjct: 543 DSTQQEITVFSKDLKRAAD-SANVGADSNFDLYDFVQIDASTIGCVVRVDREVLRIVDQQ 601
Query: 369 PDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL 428
D + ++ +I + K + DR+ + + +D V+ E +G+QG V +I+RG L
Sbjct: 602 GDVRTLLHTQVSQIVGR-NKHAVATDRDGSEIRHEDDVK--EHGGEGRQGKVLYIHRGTL 658
Query: 429 FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRG 488
F+ +R +E+ G +S++ V + G S N P + +
Sbjct: 659 FVRNRELVENQGIFVVRSNNVVTMAAKSGRAQAQGPDLSGIN-----PALNAGANGNANA 713
Query: 489 GPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDR 548
PP R GR D L+G TV +R G YKG G V D R+EL ++ K V+V +
Sbjct: 714 MPPP--RASFGR---DKLIGKTVTIRKGAYKGLLGIVKDTMNDEARIELHTKNKQVSVKK 768
Query: 549 SMIS 552
+++
Sbjct: 769 ELLT 772
Score = 40.8 bits (94), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 44/113 (38%), Gaps = 32/113 (28%)
Query: 630 SWGTSP---QYQPG---SPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP 683
+WG SP +PG +P AY APTPG+ A TPGG
Sbjct: 923 AWGGSPGNAASKPGGLSAPTPGAYNAPTPGAYAAPTPGGY------------------GA 964
Query: 684 YLPSTPGGQPM-TPNSASYLPGTPG-------GQPMTPGTGGLDAMSPVIGAD 728
Y TPGG PM P +Y TPG G P GG D +P D
Sbjct: 965 YSAPTPGGPPMDAPTPGNYSAPTPGDSSGGRYGAATAPTPGGWDVATPAPSGD 1017
>gi|302307559|ref|NP_984283.2| ADR187Wp [Ashbya gossypii ATCC 10895]
gi|442570042|sp|Q759T6.2|SPT5_ASHGO RecName: Full=Transcription elongation factor SPT5; AltName:
Full=Chromatin elongation factor SPT5
gi|299789057|gb|AAS52107.2| ADR187Wp [Ashbya gossypii ATCC 10895]
gi|374107498|gb|AEY96406.1| FADR187Wp [Ashbya gossypii FDAG1]
Length = 958
Score = 184 bits (468), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 158/561 (28%), Positives = 267/561 (47%), Gaps = 54/561 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 223 KLKILSIFQRDSFSGRIYIEAPKQSVIEKFCNGVPDIYVNQKLLIPVQELPLLLKPSKSD 282
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL--QALANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + + +K++PR+D + ++ AK
Sbjct: 283 DVRLEPGSYVRIKRGIYKGDLAVVEQLSDNNLECMLKVVPRLDYGKNDEVDPDTQQKKAK 342
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
K F PPP+ N +D+A L+ R E+ DY DG+L K
Sbjct: 343 KVSFAQRPPPQLFNPTMALRMDQA-NLYKRDEKHFTYRNEDYI---------DGYLIKVF 392
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + NI PT +EL +F + ++G D+ ++S A K F GD V ++ G+
Sbjct: 393 KIQYLKTANIHPTVEELARFGS--KDGAVDLTTISQTIKKAQASKAMFQPGDRVEILNGE 450
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGL-PKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
+ KG+V + + + + + G K L L K FEPG+HV V+SG G G+
Sbjct: 451 QRGSKGYVTRTSTDIISV--SLTGFNAKPLGFPVSSLRKIFEPGDHVSVMSGDHQGDAGL 508
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
VL V+ + +SD T+E++ + A+++ +S + T + DY L D+V L + +I
Sbjct: 509 VLIVKNGQVTFVSDQTRENLTISANNLTKSMDSTPTSS---DYALHDIVELSAKNVACVI 565
Query: 356 RVESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEG 411
+ + F+VL D +V+ V L++I + + V D N + + D V VE
Sbjct: 566 QAGHDIFKVLD---DSGKVSTVTKGSILKKINTTRSRIAAV-DGNGKEIKIGDTV--VEK 619
Query: 412 PCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNS 471
++G V ++ +FI + +E+AG + V R S+ +
Sbjct: 620 VGARREGQVLYVQSHQIFIVSKKIVENAGVFVVNPMNVEAV------ASRENLIASKLDL 673
Query: 472 LRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
+ P I G S+ P G D + TV++R YKG G V DV G
Sbjct: 674 TKMNPEIAAKMGPPSQTAQPVS-------VGRDVALNKTVRIRSAGYKGQLGIVKDVNGD 726
Query: 532 SVRVELESQMKVVTVDRSMIS 552
VEL S+ K +TVD+ ++
Sbjct: 727 MATVELHSKNKHITVDKRKLT 747
>gi|449531751|ref|XP_004172849.1| PREDICTED: putative transcription elongation factor SPT5 homolog
1-like, partial [Cucumis sativus]
Length = 620
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 141/219 (64%), Gaps = 4/219 (1%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G++LQI+S ++H+K +IY+EA ++ + EACKG+ IYS +V VP
Sbjct: 98 MQKFVDLHSFGNKLQIKSAFCVEHVKGFIYVEAPRQYDLIEACKGITGIYSTRVASVPEN 157
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
+++ +L+V S+ +++ T R+K G YKGDLA++V V+N R+R TVKL+PRIDLQA+A
Sbjct: 158 DISQLLSVRSRVSEVTVGTMARVKNGKYKGDLAQIVAVNNARKRATVKLVPRIDLQAMAE 217
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
K G AKK P PR +N E E ++ RRD TG FE + GM+ KDG+LYK
Sbjct: 218 KFGGGAAAKKTA-NPAPRLINSSELAEFRPLMQFRRDRETGKLFEFLDGMMLKDGYLYKK 276
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF 216
+S+ S+S + P+ DEL KF+ N +D+ LS L+
Sbjct: 277 ISLDSLSCWGVMPSEDELLKFKPSESNESNDLEWLSQLY 315
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 120/228 (52%), Gaps = 15/228 (6%)
Query: 335 IGDYELRDLVLLDNNSFGVIIRV--ESEAFQVLKGVPDRPEVALVKLREIKC-KLEKKSN 391
GD+ +LV FG+I+ + +++++LK PD V V+ +E+K L+ K
Sbjct: 347 FGDH---NLVCFGRKDFGMILGTSEKDDSYKILKDSPDGSVVVNVQRKELKSGALDAKFT 403
Query: 392 VQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVV 451
D N ++V D V+++EG K KQG V+H+YR LF++D + +++ G+ C KS+ C
Sbjct: 404 AADHNGKIISVSDNVKVLEGSLKDKQGIVKHVYRHTLFVYDENEVDNDGYFCCKSNMCEK 463
Query: 452 VG------GSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDA 505
+ G + D+ + F+S P P+ P G NR R
Sbjct: 464 IKISYDVPGGKVEDDKGFSGFEDFSSSPKSPLSPKKPWAEKETGREY---NRDDRADGMF 520
Query: 506 LVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISD 553
+G T+++R+GP KGY RV+ V+ + V V+L+SQ KV+TV +S+
Sbjct: 521 SIGQTLRIRVGPLKGYLCRVIAVRKRDVTVKLDSQQKVLTVRSDFLSE 568
>gi|50289139|ref|XP_446999.1| hypothetical protein [Candida glabrata CBS 138]
gi|74609840|sp|Q6FRZ5.1|SPT5_CANGA RecName: Full=Transcription elongation factor SPT5; AltName:
Full=Chromatin elongation factor SPT5
gi|49526308|emb|CAG59932.1| unnamed protein product [Candida glabrata]
Length = 1010
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 155/562 (27%), Positives = 272/562 (48%), Gaps = 53/562 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 271 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPSKSD 330
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + V +K++PR+D + + + ++
Sbjct: 331 DVALEEGSYVRVKRGIYKGDLAMVDQISENNLEVMLKIVPRLDYGKFDEIDPVTQQRKSR 390
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+ F P P+ N +D+A L+ R +R DY DG+LYK+
Sbjct: 391 RPTFAHRPAPQLFNPTMALRLDQA-NLYKRDDRHFTYKNEDYI---------DGYLYKSF 440
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + +NIQPT +EL +F + + G D+ ++S A K F GD V ++ G+
Sbjct: 441 RIQHVETKNIQPTVEELARFGS--KEGAVDLTAISQSIKKAQAAKVSFQPGDRVEILNGE 498
Query: 237 LKNLKGWVEKVDEENVHIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
+ +G V K + PE P V++ L K FEPG+HV V++G G G+
Sbjct: 499 QRGSRGIVAKSTTTIATVNLPEFPLKPLEFPVSA--LRKIFEPGDHVMVINGEHQGDAGL 556
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
VL ++Q + +S+ T+E++ + A+++ +S + T + +Y L D+V L + II
Sbjct: 557 VLTIKQGQVTFMSNQTREEVTITANNLSKSIDSTPTSS---EYSLHDIVELSAKNVACII 613
Query: 356 RVESEAFQVLKGVPDRPEVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEGP 412
+ + F+V + + +V+ + I K+ + D + N + + D IVE
Sbjct: 614 QAGHDIFKV---IDETGKVSTITKGSILSKINTSRSRLTTVDSSGNEIKIGD--SIVEKI 668
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
++G V +I +F+ + +E+AG + + S+ N N S+ N
Sbjct: 669 GARREGQVLYIQSQQIFVVSKKIVENAGVFVVNPVNVEAI-ASKDNMLNNKLDLSKMN-- 725
Query: 473 RTPPRIPQSPGRYSRGGPPAGGRNRGG--RGGHDALVGTTVKVRLGPYKGYRGRVVDVKG 530
P S+ GPP R G + +G TV+VR YKG G V DV G
Sbjct: 726 ---------PDIISKMGPPKSSMPSAAPVRTGREVALGKTVRVRSAGYKGQLGIVKDVNG 776
Query: 531 QSVRVELESQMKVVTVDRSMIS 552
VEL S+ K +T+D+ ++
Sbjct: 777 DKATVELHSKNKHITIDKRKLT 798
>gi|452847877|gb|EME49809.1| hypothetical protein DOTSEDRAFT_40962 [Dothistroma septosporum
NZE10]
Length = 1011
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 155/562 (27%), Positives = 265/562 (47%), Gaps = 64/562 (11%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+ +Y+EA ++ + + +G+ +I+ K ++P+ EM D+L + K L +VR
Sbjct: 270 MSGSLYVEAMRQDDIMSSLEGITHIFFGTKPQMIPVEEMPDLLRAK-KQKRLEPGMYVRP 328
Query: 81 KIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL------QALANKLEGREVAKKKPFV--- 131
K G Y GDLA+V ++ V ++L+PR+D A + +G+ K+K
Sbjct: 329 KRGLYAGDLAQVDSIEPNGTEVFLRLVPRLDYGLTEDASAPVMESDGQGGTKRKRVQRAV 388
Query: 132 ---PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKD-----------GFLYKT 177
P R + EAR+ H R Y GG L ++ GFL
Sbjct: 389 GQRPAARLFSEVEARKRHTR-----------YLSKSGGNLSRNAWQYQGKEYVAGFLVDP 437
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKG--HFMKGDAVIVIKG 235
+ ++ N+ PT +E+ KF E+G ++ + + ++ GD V + +G
Sbjct: 438 FKIGTLETANVNPTLEEVTKFAAGNEDGTENLDLAALAATLKTSAGADYLPGDKVQIYRG 497
Query: 236 DLKNLKGWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGAT 293
+ + L G +V E V IR + L +T+ ++L K F G+HVKV+ G++
Sbjct: 498 EQRGLTGRAVEVYGEVVRIRIDEGQLRGQTVEAPIRDLRKLFREGDHVKVIGGSKYQDEV 557
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGV 353
GMV++ + + IL+D+ + +I VFA D+ E+++ + G+ Y+L DLV LD ++ G
Sbjct: 558 GMVVRTKDDRVTILTDSNQTEITVFAKDLREATD-SGGVVGASKYDLFDLVQLDASTVGC 616
Query: 354 IIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSN---VQDRNKNTVAVKDVVRIVE 410
II+V+ E+ +VL V + I K+E++ + DR+ N + V D VR
Sbjct: 617 IIKVDRESLRVLDQFG---SVRTILPSSISNKIERRRDQGPAADRSGNEIKVGDTVREYG 673
Query: 411 GPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFN 470
G + K GPV H++R +F R ++AG A+ C V + A G R G ++ N
Sbjct: 674 G--ESKSGPVLHVHRSYVFAQSRESRDNAGVWVAR---CGNVEIAAAKGGRVGPDLTKMN 728
Query: 471 SLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKG 530
+ P +P PP + G D L+G T+K+R G KG G V D
Sbjct: 729 TALRGPNAGVAPM------PPPQQK------GRDRLIGKTIKIRAGTSKGMIGIVKDTTD 776
Query: 531 QSVRVELESQMKVVTVDRSMIS 552
+EL ++ K +T+ + I+
Sbjct: 777 DQAIIELHAKNKKLTIAKDKIA 798
>gi|399219228|emb|CCF76115.1| unnamed protein product [Babesia microti strain RI]
Length = 943
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 171/563 (30%), Positives = 263/563 (46%), Gaps = 68/563 (12%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
+G +L + S A D L NY+YIEAD + V +A GLRN+Y V +VP+ EM V V
Sbjct: 211 RGIDLGVFSSFASDTLTNYLYIEADNKRDVIDALTGLRNVYINSVKMVPLSEMPSVFNVV 270
Query: 67 SKAIDLSR-DTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID------LQALANKL 119
+ R D +VR++ G YKGDL +V +VD RVT++LIPR+D LQ+ + L
Sbjct: 271 LPDASIPRIDEYVRVRTGLYKGDLGQVFEVDVNNGRVTLRLIPRLDMPTNDQLQSSSQSL 330
Query: 120 E------------GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDY----FEN 163
E G + K PP F N E E +E P T Y FE+
Sbjct: 331 EPTVKNVSANGSTGTGFSGMKR--PPKNFFNRLEVEEAGGLLEVGFYPGTVRYNNHTFED 388
Query: 164 IGGMLFKDGFLYKTVSMKSI-SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKG 222
G +L++ +S+K I + +++ T EL++F N D +L A R G
Sbjct: 389 SGHILYR-------ISLKGIVTGAHVEATLKELKEFNQR-RNVSFDQEALKVTKAKRTLG 440
Query: 223 HFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHV 282
+ G+ V VIKG+L NLKG + V V + E G+ + V + KYFE G+ V
Sbjct: 441 LYKLGERVKVIKGELTNLKGKIIGVSTNYVKVDTEELGID-SFDVPWGDFVKYFEEGDSV 499
Query: 283 KVVSGTQAGATGMVLKVE--QHVLIILSDTTKEDIRVFADDV-VESSEVTTG--ITKIGD 337
+ +SG AG TG++ V+ ++ S + ++ R +++ + SE T G + +
Sbjct: 500 RAISGINAGETGLISLVDLPNRSAVVFSPLSGQEFRCSLENLSLTRSEGTGGQKLLSLNG 559
Query: 338 YELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV-QDRN 396
Y + DLV L N + GV++ ++ ++ K + ++ + L +I CK V +D N
Sbjct: 560 YTMGDLVQLTNGTIGVLVYIDKN--RIAKFLTVNSQLIVGNLSQILCKRNNADQVTKDAN 617
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLE-HAG----FICAKSSSCVV 451
+V K V I +GP KGK V HI++ +F+ + AG ++ S +C+
Sbjct: 618 MASVRCKCNVIISKGPLKGKNALVLHIWQSWVFLMLADYARGKAGAIHQYVTETSVTCL- 676
Query: 452 VGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRY--SRGGPPAGGRNRGGRGGH---DAL 506
G+ N P QSP S G N RGG +
Sbjct: 677 ----------EGEDVICLN----PHTSSQSPTHSLGSNDKKQFDGTNNNTRGGSRYINPF 722
Query: 507 VGTTVKVRLGPYKGYRGRVVDVK 529
+G TVK+ +G YKG +V V+
Sbjct: 723 IGKTVKILVGRYKGLLADIVKVE 745
>gi|189202904|ref|XP_001937788.1| transcription elongation factor spt5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984887|gb|EDU50375.1| transcription elongation factor spt5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1020
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 145/547 (26%), Positives = 269/547 (49%), Gaps = 43/547 (7%)
Query: 25 YIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIG 83
++Y+EAD + V E +G++N++ +P +E D+L + +A L +VRM+
Sbjct: 246 FLYVEADSKQAVVELIEGIQNVFMGSGQFSIPPKERPDLLRKKKRA-PLEVGKFVRMQRP 304
Query: 84 -NYKGDLAKVVDVDNVRQRVTVKLIPRIDL-------QALANKLEGREVAKKKPFVPPPR 135
YKGDLAKVV+V V+L+PR+D A+ NK + R K+ PP +
Sbjct: 305 PTYKGDLAKVVEVSTNGLDCVVQLVPRLDYGLNDDANAAVDNKRK-RGFFGKQTERPPAK 363
Query: 136 FMNVDEARELHIRVERRRDPMTGDYFE---NIGGMLFKDGFLYKTVSMKSISAQNIQPTF 192
N EA++ H++ MTG + G +++GFL K V + +S + + P
Sbjct: 364 LFNEAEAKKRHMK----HLSMTGSGNQRAYTYKGEDYQNGFLIKEVKVNWVSTEKVNPKM 419
Query: 193 DELEKFRTPGENGESDIASLSTLFANRKK---GHFMKGDAVIVIKGDLKNLKGWVEKVDE 249
+EL+ F +G + ++ A + F G+ V + G+ K ++G V
Sbjct: 420 EELQFFSIQNADGTETMDLMAVQAAQKAADSGSAFAAGENVEIYTGEQKGIRGTTVTVTG 479
Query: 250 ENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLI 305
+ + +R ++KG + + K L K F G+HVKV+ G++ G+V ++ +
Sbjct: 480 DILTLRVSEGDLKG--RRIDAPVKTLRKLFRDGDHVKVIGGSKYVDEVGLVTRIRDDKIT 537
Query: 306 ILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVL 365
+L D+T+++I VF+ D+ +++ + + +++L D V +D ++ G ++RV+ E +++
Sbjct: 538 LLCDSTQQEITVFSKDLKRAAD-SANVGADSNFDLYDFVQIDASTIGCVVRVDREVLRIV 596
Query: 366 KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYR 425
D + ++ +I + K + DR+ + + +D V+ G + +QG V +I+R
Sbjct: 597 DQQGDVRTLLHTQVSQIVGR-NKHAVATDRDGHEIRHEDDVKEYGG--EQRQGKVLYIHR 653
Query: 426 GILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRY 485
G+LF+ +R +E+ G +S++ V + G S N P + + G
Sbjct: 654 GVLFVRNRELVENQGIFVVRSNNVVTMAAKSGRAQAQGPDLSGIN-----PAL--NAGAN 706
Query: 486 SRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVT 545
+ G PP G D L+G TV +R G YKG G V D R+EL ++ K V+
Sbjct: 707 TTGMPPPRAFT-----GRDRLIGKTVVIRKGAYKGLLGIVKDTMNDEARIELHTKNKQVS 761
Query: 546 VDRSMIS 552
V + +++
Sbjct: 762 VKKELLT 768
>gi|156368739|ref|XP_001627850.1| predicted protein [Nematostella vectensis]
gi|156214810|gb|EDO35787.1| predicted protein [Nematostella vectensis]
Length = 490
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 165/497 (33%), Positives = 237/497 (47%), Gaps = 51/497 (10%)
Query: 373 EVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIH 431
+V VK + + + E +S V D +NT+ VKD+VR+V+GP G QG ++H+YR F++
Sbjct: 8 KVIQVKHQAVTKRRENRSAVALDAEQNTIQVKDIVRVVDGPHLGLQGEIKHLYRSFAFLY 67
Query: 432 DRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGR------- 484
+ +E++G I K+ V+ GG + + + PRI SP R
Sbjct: 68 SKMVIENSGIIVCKTRHVVLAGGGKVHFNATTGFGGFGTFAPASPRI-SSPARDGGGGNV 126
Query: 485 -YSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKV 543
P A GR RG G +L+ TV++ GPYKGY G V D + RVEL S K
Sbjct: 127 RGGGQSPRAVGRGRGRGGRDTSLIMQTVRICQGPYKGYIGIVKDATETTARVELHSNCKT 186
Query: 544 VTVDRSMISD----NVVVSTPYRDTPRYGM---GSETPMH-PSRTPLHPYMTPMRD---- 591
++VDRS ++ V ++ + TP YG GS+TP + SRTP++ TP D
Sbjct: 187 ISVDRSRLAHVSGPAKVGASLHSRTPMYGSQTPGSQTPSYAASRTPMYGSQTPTHDGSRT 246
Query: 592 ----AGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAY 647
TP HD RTP+ AW+P P +P R+ +D + G ++P G P+
Sbjct: 247 PHYGGSMTPSHDPSRTPLHGGAWDPTLPNTPARN--DDFDYGFDASTPSPAAGYAPNTPN 304
Query: 648 EAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP--YL-PSTPGGQPMTPNSASYLPG 704
A G G TP + S Y +PSP Y P TPGG + P S +Y P
Sbjct: 305 PATPGGYGGPYTPNTPGPAMYGSEPTYSPYTQSPSPAGYANPMTPGGG-LPPVSPAYNPH 363
Query: 705 TPGGQPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGEESVVGVIRE-----VLPDG 759
TPG P T G G W DI VR + ++ + + G
Sbjct: 364 TPGAGLEEPSTSG------------PGEWVTTDIEVRINENYEDPQLLDKVGVVRDVVGG 411
Query: 760 SCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVD 819
C V L G +I+ + I+ V P K DK+K++ G +R TG LI +D DGI+K+D
Sbjct: 412 VCTVYLPDEGR--SISTVGAHIDAVQPDKQDKVKVIVGDYRERTGTLINIDDKDGIIKMD 469
Query: 820 VSLDVKILDMAILAKLA 836
++KIL + LAKLA
Sbjct: 470 RPEELKILPLDYLAKLA 486
>gi|209882518|ref|XP_002142695.1| KOW motif family protein [Cryptosporidium muris RN66]
gi|209558301|gb|EEA08346.1| KOW motif family protein [Cryptosporidium muris RN66]
Length = 939
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 156/576 (27%), Positives = 272/576 (47%), Gaps = 42/576 (7%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKA 69
+L I S A + + +YIEA+ + V++A +GL + + L+P++EMT V +V+ +
Sbjct: 221 KLPILSAYAASNFRGCLYIEAEAPSDVRDALEGLSGVRLSSIKLIPVKEMTQVFSVDMQE 280
Query: 70 IDL-SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEG---REVA 125
+L +RD+WVR++ G Y GDLA++ +VD V V+L+PR+D+ AL K +G +
Sbjct: 281 KELLTRDSWVRIRSGLYAGDLAQIYEVDEHESNVIVRLVPRLDIPALIRKSQGIIDKNFG 340
Query: 126 KKKPFVPPPRFMNVDEARELHIRVE----RRRDPMTGDYFENIGGMLFKDGFLYKTVSMK 181
K+ P + + D+ L VE R FE G L K K S +
Sbjct: 341 NKR-IRPQAKLFDRDKVENLGGIVELTHLRGTAKFANQLFELDKGYLLK-----KMRSNR 394
Query: 182 SISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLK 241
I+ + P+ +E++ F + + I + + L +++K +F GD + +++G+L N K
Sbjct: 395 LITGTLVNPSIEEIQTFYEGIDISDIPIHTQAIL-SSKKSANFFVGDIITILRGELTNTK 453
Query: 242 GWVEKVDEEN---VHIRPEMK--GLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
+ ++ N + + P K G+ K + + + KYFE G+ V ++ GT +G+V
Sbjct: 454 ARITSINNLNKGILEVLPIDKSLGITKPILIQQDLVSKYFEIGDSVLIIEGTHESESGLV 513
Query: 297 --LKVEQHVLIILSDTTKEDIRV---FADDVVESSEVTTGITKIGDYELRDLVLLDNNSF 351
L++ + +I + IR F V ++ ++ ++ I + L DLV L + +
Sbjct: 514 TGLEMNNTIAVIYPLSGTIPIRCPTNFLKRVSQNIVASSSLSTIDGFSLDDLVQLSDGTV 573
Query: 352 GVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKK--SNVQDRNKNTVAVKDVVRIV 409
GVI V + LK + E++ +K EI K + V D N K +V ++
Sbjct: 574 GVITFVGRN--RNLKVLNSNGEISTIKSSEISSKRHTSLVTRVTDHNGTIFGAKSMVSVL 631
Query: 410 EGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRF 469
+GP +GK G VEHI++ I F+ L+ G+I S S V+ R+ D
Sbjct: 632 DGPDEGKSGRVEHIWKSICFVKIPIKLDDGGYIVCDSRSLTVI--------RSNDDNLNN 683
Query: 470 NSLRTPPRIPQSPGRYSRGGPPAGG--RNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVD 527
++ T QS G G G N +G D V V++ G +K G +
Sbjct: 684 SNTHTKLTKVQSFGHGGFGRIRGMGLISNSRKQGPDDMFVNQKVRILRGRHKALLGSIRG 743
Query: 528 VKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRD 563
KG ++ + L+ V + R D V++ TP +
Sbjct: 744 FKGNNIEILLDIGPHTVVLRR---EDVVMIGTPINN 776
>gi|50303257|ref|XP_451570.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74607578|sp|Q6CWW9.1|SPT5_KLULA RecName: Full=Transcription elongation factor SPT5; AltName:
Full=Chromatin elongation factor SPT5
gi|49640702|emb|CAH01963.1| KLLA0B00891p [Kluyveromyces lactis]
Length = 1036
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 194/753 (25%), Positives = 331/753 (43%), Gaps = 80/753 (10%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ G+ ++YS + +L+P++E+ +L +S
Sbjct: 277 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFVNGVPDVYSNQKLLIPVQELPLLLKPTKSD 336
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE---GREVA 125
+ L ++VR+K G YK DLA + + +K++PR+D ++++ + A
Sbjct: 337 EVRLDVGSYVRIKRGIYKNDLAVIDQISQNNLEALLKIVPRLDY-GKNDEIDPDTNQRKA 395
Query: 126 KKKPFV--PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
K+ F PPP+ N A L +RD Y + + DG+L+K+ ++ +
Sbjct: 396 KRATFASRPPPQLFNPTMALRLDQANLFKRDDRHFTYRKED----YVDGYLFKSFKIQYL 451
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGDLKNLK 241
+NIQPT +EL +F + + G+ D+A+++ A K F GD V V+ G+ + +
Sbjct: 452 DTKNIQPTVEELSRFGS--KEGDVDLAAIAQTMKKAQASKAMFQPGDRVEVLTGEQRGSR 509
Query: 242 GWVEKVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
G V + ++ + ++ + G K+L L K FE G+HV V++G G G+VL V+
Sbjct: 510 GVVTRSSKDVISVK--LSGFSDKSLEFPIASLRKIFELGDHVTVIAGEHEGNAGLVLLVQ 567
Query: 301 QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE 360
+ +SD T+E++ + A+++ +S + T + +Y L D+V L + +I+ +
Sbjct: 568 NGQVTFVSDQTRENLTISANNLSKSMDSTPTSS---EYALHDIVELSAKNVACVIQAGHD 624
Query: 361 AFQVLKGVPDRPEVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEGPCKGKQ 417
F++ + D +VA V I K+ K D N + + DVVR E ++
Sbjct: 625 IFKI---IDDSGKVATVTKGSILAKINVARAKVAAVDGNGREIKIGDVVR--EKIGSRRE 679
Query: 418 GPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPR 477
G V ++ +FI + E+AG + V S+ N + S+ N
Sbjct: 680 GQVLYVQNQHIFIRSKTITENAGVFVVNPMNVEAV-ASKENLMSSALDLSKIN------- 731
Query: 478 IPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVEL 537
P S+ GPP + + G D + TV++R YKG G V DV G +EL
Sbjct: 732 ----PNIASKMGPPQTTQ-QTRLVGRDVALNKTVRIRSAGYKGQLGIVKDVNGDKATIEL 786
Query: 538 ESQMKVVTVDR---SMISDNVVVSTPYRD-TPRYGMGSETPMHPS--RTPLHPYMTPMRD 591
S+ K +T+D+ + S Y + R G T + PS P H M
Sbjct: 787 HSKNKHITIDKRKLTYFSHEGGEGITYDELVSRRGRTPHTRLGPSYVSAPRH-----MAA 841
Query: 592 AGATPIHD-----GMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY--------- 637
GA + G TP WN + P ++G SWG + +
Sbjct: 842 GGAVATNTPQQLPGGMTP----GWNAFDGGKTPAVG-QNGGTSSWGGASTWGGQGPGGAS 896
Query: 638 ----QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQP 693
G+ + + T G AST G S G ++S A S + GG
Sbjct: 897 AWGGAAGNTSTWGGQGATSTWGGASTWGNKSSYGGASSWAASGESGAASAW----GGGNK 952
Query: 694 MTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIG 726
+ S G GG G+G S G
Sbjct: 953 SSYGGTSTWGGNQGGVSAWGGSGNKSQRSKNTG 985
>gi|15237667|ref|NP_196049.1| kow domain-containing transcription factor 1 [Arabidopsis thaliana]
gi|332003341|gb|AED90724.1| kow domain-containing transcription factor 1 [Arabidopsis thaliana]
Length = 1493
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 138/215 (64%), Gaps = 3/215 (1%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVES 67
G++L+I SV ++DH+K +I+IEADKE V EACK L IY+ +++L+P E ++L V+
Sbjct: 176 GTKLEIISVFSVDHVKGFIFIEADKEHDVLEACKSLVGIYATRMVLLPKAETPNLLTVQK 235
Query: 68 KAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKK 127
K +S TW R+K G YKGDLA++V V + R + +KLIPRID+QAL K G V +
Sbjct: 236 KTKKVSEGTWARVKNGKYKGDLAQIVAVSDTRNKALIKLIPRIDIQALTQKY-GGGVTVQ 294
Query: 128 KPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQN 187
K P PR ++ E E ++ RRD TG FE++ ++ KDG+LYK VS+ SIS+
Sbjct: 295 KGQTPAPRLISSSELEEFRPLIQVRRDRDTGITFEHLDSLMLKDGYLYKKVSLDSISSWG 354
Query: 188 IQPTFDELEKFRTPGENGES-DIASLSTLFANRKK 221
+ PT DEL KF TP + E+ D+ +S ++ +K
Sbjct: 355 VIPTKDELLKF-TPVDRKETGDVEWISEIYGEERK 388
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 124/233 (53%), Gaps = 14/233 (6%)
Query: 338 YELRDLVLLDNNSFGVIIRVE--SEAFQVLKGVPDRPEVALVKLREIKCK-LEKKSNVQD 394
YEL +LV FG+I+ V+ + ++VLK D P V V +E++ + K D
Sbjct: 437 YELYNLVCFSRKDFGLIVGVDDKGDGYKVLKEGIDGPVVVTVGKKEMQNGPFDSKFTALD 496
Query: 395 RNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSC--VVV 452
NK ++V DVV+I +GP +GKQG V +YRGI+F++D E+ G+ C KS SC V +
Sbjct: 497 LNKKQISVNDVVKISKGPSEGKQGVVRQVYRGIIFLYDESEEENGGYFCCKSQSCEKVKL 556
Query: 453 GGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRG--GHDALVGTT 510
+N G + F + P+ P SP + + P N +G G +G
Sbjct: 557 FTEESNEKTGGFDGTAFEDFVSSPKSPLSPEKEWQ---PRERYNSSNQGDIGSTYSIGQK 613
Query: 511 VKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISD----NVVVST 559
+++R+GP KGY RV+ ++ V V+L+SQ K+ TV +++ N V+ST
Sbjct: 614 LRIRVGPLKGYLCRVIALRYSDVTVKLDSQHKIFTVKSEHLAEVRDRNTVLST 666
>gi|363751507|ref|XP_003645970.1| hypothetical protein Ecym_4073 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889605|gb|AET39153.1| hypothetical protein Ecym_4073 [Eremothecium cymbalariae
DBVPG#7215]
Length = 980
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 154/560 (27%), Positives = 269/560 (48%), Gaps = 54/560 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 238 KLKILSIFQRDSFSGRIYIEAPKQSVIEKFCNGVPDIYVNQKLLIPVQELPLLLKPSKSD 297
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL--QALANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + + +K++PR+D + ++ AK
Sbjct: 298 DVRLEPGSYVRIKRGIYKGDLAVVEQISDNNLECMLKVVPRLDYGKNDEVDPDTKQKKAK 357
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+ F PPP+ N +D+A L+ R E+ DY DG+L K
Sbjct: 358 RATFSQRPPPQLFNPTMALRMDQA-NLYKRDEKHFTYRNEDYI---------DGYLIKVF 407
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + ++NI P +EL +F + ++G D+ ++S A + F GD V ++ G+
Sbjct: 408 KIQYLKSKNIHPAVEELARFGS--KDGAVDLTTISQTIKKAQASRAMFQPGDRVEILSGE 465
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGL-PKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
+ KG V + + + ++ + G K L L K FEPG+HV V+SG G G+
Sbjct: 466 QRGSKGIVIRTSTDIISVK--LIGFNAKPLGFLISSLRKIFEPGDHVSVMSGDHQGDAGL 523
Query: 296 VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVII 355
VL V+ + +SD T+E++ + A+++ +S + T G+Y L D+V L + +I
Sbjct: 524 VLSVKNGQVTFVSDQTRENLTISANNLTKSMDST---PTSGEYALHDIVELSAKNVACVI 580
Query: 356 RVESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEG 411
+ + F+VL D +V+ V L++I + ++V D + + + D V VE
Sbjct: 581 QAGHDIFKVLD---DSGKVSTVTKGSILKKINTSRSRIASV-DGSGKEIKIGDTV--VEK 634
Query: 412 PCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNS 471
++G V ++ +FI + +E+AG + V ++ S+ +
Sbjct: 635 LGARREGQVLYVQSHQIFIVSKKIVENAGVFVVNPINVEAV------ASKDNLIASKLDL 688
Query: 472 LRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
+ P I G S+ P R G D + TV+V YKG G V DV G
Sbjct: 689 SKMNPEIAAKMGPPSQSAQPI-------RVGRDMALNKTVRVCSAGYKGQLGIVKDVNGD 741
Query: 532 SVRVELESQMKVVTVDRSMI 551
VEL S+ K +TVD+ +
Sbjct: 742 LATVELHSKNKHITVDKHKL 761
>gi|297806403|ref|XP_002871085.1| hypothetical protein ARALYDRAFT_487210 [Arabidopsis lyrata subsp.
lyrata]
gi|297316922|gb|EFH47344.1| hypothetical protein ARALYDRAFT_487210 [Arabidopsis lyrata subsp.
lyrata]
Length = 1476
Score = 175 bits (444), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 138/215 (64%), Gaps = 3/215 (1%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVES 67
G++LQI SV +LDH+K +I+IEADKE V EACK L IY+ +++L+P E ++L V+
Sbjct: 176 GTKLQIISVFSLDHVKGFIFIEADKEHDVLEACKSLTGIYATRMVLLPKAETPNLLTVQR 235
Query: 68 KAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKK 127
K +S TW R+K G YKGDLA++V V + + + +KLIPRID+QAL K G V +
Sbjct: 236 KTKKVSEGTWARVKNGKYKGDLAQIVAVSDTKSKALIKLIPRIDIQALTQKY-GGGVTVQ 294
Query: 128 KPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQN 187
K P PR ++ E E ++ RRD TG FE++ M+ KDG+LYK VS+ SIS+
Sbjct: 295 KGQSPAPRLISSSELEEFRPLIQVRRDRDTGITFEHLDSMMLKDGYLYKKVSLDSISSWG 354
Query: 188 IQPTFDELEKFRTPGENGES-DIASLSTLFANRKK 221
+ P+ +E+ KF TP + E+ D+ +S ++ +K
Sbjct: 355 VIPSKEEILKF-TPVDRKETGDVEWISEIYGEERK 388
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 118/243 (48%), Gaps = 15/243 (6%)
Query: 338 YELRDLVLLDNNSFGVIIRVE--SEAFQVLKGVPDRPEVALVKLREIKCK-LEKKSNVQD 394
YEL +LV FG+I+ V+ + ++VLK D P V V +E++ + K D
Sbjct: 421 YELYNLVCFSRKDFGLIVGVDDKGDGYKVLKEGLDGPVVVTVGKKEMQNGPFDSKFTALD 480
Query: 395 RNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSC--VVV 452
N +++ DV GKQG V +YRGI+FI+D E+ G+ C KS SC V +
Sbjct: 481 LNNKQISINDV---------GKQGVVRQVYRGIIFIYDESEEENGGYFCCKSHSCEKVKL 531
Query: 453 GGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVK 512
+N G S F + P+ P SP + + N+G R G +G ++
Sbjct: 532 FTEDSNEKTGGFDASAFGDSVSSPKSPLSPEKEWQPRERYNNSNQGDR-GSTYSIGQKLR 590
Query: 513 VRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSE 572
+R+GP KGY RV+ ++ V V+L+SQ KV TV + + +T + G+GS
Sbjct: 591 IRVGPLKGYLCRVIALRYSDVTVKLDSQHKVFTVKSEHLVEVRDRNTALSTSGDAGIGSF 650
Query: 573 TPM 575
P
Sbjct: 651 QPF 653
>gi|330935119|ref|XP_003304828.1| hypothetical protein PTT_17536 [Pyrenophora teres f. teres 0-1]
gi|311318365|gb|EFQ87072.1| hypothetical protein PTT_17536 [Pyrenophora teres f. teres 0-1]
Length = 818
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 142/544 (26%), Positives = 263/544 (48%), Gaps = 37/544 (6%)
Query: 25 YIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIG 83
++Y+EAD + V E +G++N++ +P +E D+L + +A L +VRM+
Sbjct: 246 FLYVEADSKQAVVELIEGIQNVFMGSGQFSIPPKERPDLLRKKKRA-PLEVGKFVRMQRP 304
Query: 84 -NYKGDLAKVVDVDNVRQRVTVKLIPRIDL------QALANKLEGREVAKKKPFVPPPRF 136
YKGDLAKVV+V V+L+PR+D A + R K+ PP +
Sbjct: 305 PTYKGDLAKVVEVSTNGLDCVVQLVPRLDYGLNDDANAAVDNKRKRGFFGKQTERPPAKL 364
Query: 137 MNVDEARELHIRVERRRDPMTGDYFE---NIGGMLFKDGFLYKTVSMKSISAQNIQPTFD 193
N EA++ H++ MTG + G +++GFL K V + +S + + P +
Sbjct: 365 FNEAEAKKRHMK----HLSMTGSGNQRAYTYKGEDYQNGFLIKEVKVNWVSTEKVNPKME 420
Query: 194 ELEKFRTPGENGESDIASLSTLFANRKK---GHFMKGDAVIVIKGDLKNLKGWVEKVDEE 250
EL+ F +G + ++ A + F G+ V + G+ K ++G V +
Sbjct: 421 ELQFFSIQNADGTETMDLMAVQAAQKAADSGSAFAAGENVEIYTGEQKGIRGTTVTVTGD 480
Query: 251 NVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILS 308
+ +R L + + K L K F G+HVKV+ G++ G+V ++ + +L
Sbjct: 481 ILTLRVSEGDLRGRRIDAPVKTLRKLFRDGDHVKVIGGSKYVDEVGLVTRIRDDKITLLC 540
Query: 309 DTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGV 368
D+T+++I VF+ D+ +++ + + +++L D V +D ++ G ++RV+ E +++
Sbjct: 541 DSTQQEITVFSKDLKRAAD-SANVGADSNFDLYDFVQIDASTIGCVVRVDREVLRIVDQQ 599
Query: 369 PDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGIL 428
D + ++ +I + K + DR+ + + +D V+ G + +QG V +I+RG+L
Sbjct: 600 GDVRTLLHTQVSQIVGR-NKHAVATDRDGHEIRHEDDVKEYGG--ENRQGKVLYIHRGVL 656
Query: 429 FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRG 488
F+ +R +E+ G +S++ V + G S N P + + G + G
Sbjct: 657 FVRNRELVENQGIFVVRSNNVVTMAAKSGRAQAQGPDLSGIN-----PAL--NAGANNTG 709
Query: 489 GPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDR 548
PP G D L+G TV +R G YKG G V D R+EL ++ K V+V +
Sbjct: 710 MPPPRAHT-----GRDRLIGKTVVIRKGAYKGLLGIVKDTMNDEARIELHTKNKQVSVKK 764
Query: 549 SMIS 552
+++
Sbjct: 765 ELLT 768
>gi|396469210|ref|XP_003838360.1| similar to transcription initiation protein spt5 [Leptosphaeria
maculans JN3]
gi|312214927|emb|CBX94881.1| similar to transcription initiation protein spt5 [Leptosphaeria
maculans JN3]
Length = 1013
Score = 175 bits (443), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 146/547 (26%), Positives = 264/547 (48%), Gaps = 41/547 (7%)
Query: 25 YIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLAVESKAIDLSRDTWVRM-KI 82
++Y+EAD +A V E +G++N++ +P +E D+L + +A L +VRM +
Sbjct: 244 FLYVEADSKAAVIELLEGIQNVFMGSDQFSIPPKERPDLLRKKKRA-PLEVGKFVRMLRP 302
Query: 83 GNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-------QALANKLEGREVAKKKPFVPPPR 135
YKGDLAKVV+V V+L+PR+D A+ NK + ++ PP +
Sbjct: 303 PTYKGDLAKVVEVSTNGLDCVVQLVPRLDYGLNEDANAAIDNKRKRGGFFGRQTERPPAK 362
Query: 136 FMNVDEARELHIRVERRRDPMTGDYFE---NIGGMLFKDGFLYKTVSMKSISAQNIQPTF 192
N EA++ H++ MTG + G +++GFL K V + +S + + P
Sbjct: 363 LFNEAEAKKRHMK----HLSMTGSGNQRAYTYKGEDYQNGFLIKEVKVNWVSTEKVNPRM 418
Query: 193 DELEKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDE 249
+EL+ F +G + A + A F GD V + G+ K ++G V
Sbjct: 419 EELQFFSVQNADGSETLDLVAVQAAQKAADSGAAFAAGDNVEIYTGEQKGIRGSTVTVIG 478
Query: 250 ENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLI 305
+ V +R E++G + + K L K F G+HVKV+ G++ G+V +++ +
Sbjct: 479 DIVTLRVSEGELRG--RRIDAPVKTLRKLFREGDHVKVIGGSKYVDEVGLVTRIKDDKIT 536
Query: 306 ILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVL 365
+L D+T+ +I VF+ D+ +++ + + +++L DLV +D ++ G ++RV+ E +V+
Sbjct: 537 LLCDSTQAEITVFSKDLKRAAD-SANLGADSNFDLYDLVQIDASTIGCVVRVDREVLRVV 595
Query: 366 KGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYR 425
D + ++ ++ + K + DR+ + + +D V+ G +G+ G V I+R
Sbjct: 596 DQHGDVRTLLQTQVSQV-VGINKHAVATDRDGSEIRHEDDVKEFAG--EGRHGKVLFIHR 652
Query: 426 GILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRY 485
G LF+ +R +E+ G +S++ + + G S N P + G
Sbjct: 653 GTLFVRNRELVENQGIFVVRSTNVITMAAKSGRAQAQGPDLSGLN-----PALNAGAGAN 707
Query: 486 SRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVT 545
PP G D L+G TV +R G YKG G V D R+EL ++ K V+
Sbjct: 708 GAAMPPPRSF------GRDKLIGKTVVIRKGAYKGLLGIVKDTMNDEARIELHTKNKQVS 761
Query: 546 VDRSMIS 552
V + +++
Sbjct: 762 VKKELLT 768
>gi|218197068|gb|EEC79495.1| hypothetical protein OsI_20547 [Oryza sativa Indica Group]
Length = 1564
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 130/201 (64%), Gaps = 4/201 (1%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G+++ I S ALDH++ ++++EA+K V EACKG ++Y ++ VP+
Sbjct: 179 MQKYVDLQKFGTKVPIISAFALDHVRGFVFVEAEKACDVTEACKGFCSVYISRINSVPVA 238
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E+ +L+ +K +S TWVRMK G YKGDLA+VV D R+RV +KLIPR+DL+A++
Sbjct: 239 EVPSLLSSRAKPFAISPGTWVRMKTGIYKGDLAQVVSADEGRKRVMIKLIPRVDLRAISK 298
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
K+ G + K+ +P PR ++ E +ER+ D T D++E + G++FKDGFLYK
Sbjct: 299 KI-GGAIPLKEAAIPAPRLISSQELEFFGSHIERKHDRQTNDFYEVLDGLMFKDGFLYKR 357
Query: 178 VSMKSISAQNIQPTFDELEKF 198
V++ S+ IQPT EL KF
Sbjct: 358 VALSSLIYWGIQPTETELLKF 378
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 132/333 (39%), Gaps = 96/333 (28%)
Query: 338 YELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIK--CKLEKKSNVQDR 395
+ L DLVL FGV+I E + ++LKG P+ V V+ ++IK C +K D
Sbjct: 444 FNLHDLVLFGRRDFGVVIAFEKDGLRILKGGPEGSAV-TVRKQDIKDVC-ADKMLTAVDH 501
Query: 396 NKNTVAVKDVVRIVEGPCK-----GKQ--GPVEHIYR----------------------- 425
K + + D V ++EGP + GKQ +E+++R
Sbjct: 502 KKKIICINDTVNVLEGPFQRDGAMGKQPGMALENLHRSKRDVRRGLRERWGDGMEIEVSR 561
Query: 426 ----------------------------GILFIHDRHHLEHAGFICAKSSSCVVVG---- 453
GILFIH+ E++GF CA+ SSC V
Sbjct: 562 VPKSSTVTVLRTGHDGEGKQGVVKHLYMGILFIHNESESENSGFFCAQCSSCENVKKRKE 621
Query: 454 -GSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDAL--VGTT 510
S G+ + + F+ + R + P R +R + L +G
Sbjct: 622 LASFTFGNSDNNPIPMFSYEQNEQRDNERPYRSTR----------------EQLFSIGEM 665
Query: 511 VKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS------DNV--VVSTPY- 561
+++R GP KGY RVV + V V+L+S +K+VTV +S DN S P+
Sbjct: 666 LRIRKGPMKGYLCRVVRIFRNDVTVKLDSLLKIVTVQAEFLSVPAKRGDNSSGAPSGPFG 725
Query: 562 --RDTPRYGMGSETPMHPSRTPLHPYMTPMRDA 592
D P + G + S P P+++A
Sbjct: 726 SEADKPSWDNGLPSFGSDSWQPFSSAALPVQNA 758
>gi|164657273|ref|XP_001729763.1| hypothetical protein MGL_3307 [Malassezia globosa CBS 7966]
gi|159103656|gb|EDP42549.1| hypothetical protein MGL_3307 [Malassezia globosa CBS 7966]
Length = 1088
Score = 173 bits (439), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 202/722 (27%), Positives = 295/722 (40%), Gaps = 130/722 (18%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQ--KVMLVPIREMTDVLAV 65
G L+I S D L I++EA + V +A GL Y+ K LVPI EM D+L +
Sbjct: 265 GRPLRIYSAFCRDSLDGQIFVEARRADDVLDAFDGLAGAYTTNTKPFLVPILEMADLLKL 324
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL---EGR 122
+ K ++ WVR+K G Y GDLA+V+DV + V VKL+PRIDL + G
Sbjct: 325 QKKNTEVPVGGWVRIKRGKYAGDLAQVLDVAENGEEVGVKLVPRIDLTPQEHDTYTDRGG 384
Query: 123 EVAKKKPFVPPPRFMNVDEARELHI-----RVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
A++ P R R + R R + P GG F+DG+L K
Sbjct: 385 TQAEEAPSTRRSRRWASVRHRVFSMPKRYRRRTRTKSPTKRGGVWVFGGETFRDGYLEKD 444
Query: 178 VSMKSISAQNIQPTFDELEKF--RTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKG 235
V M +I +++ P+ DE+ KF TP E D+
Sbjct: 445 VRMNAIQVEDVHPSLDEVLKFTGETPAEGAGVDL-------------------------- 478
Query: 236 DLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKY-FEPGNHVKVVSGTQAGATG 294
NL LA SK+ + +PG+HV+V G QAG G
Sbjct: 479 ---NL------------------------LADASKQTSEATLQPGDHVEVFEGEQAGVAG 511
Query: 295 MVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKI------GDY--ELRDLVLL 346
+V + V+ + +D ++ ++ + GD+ EL DLV +
Sbjct: 512 IVDAMSGDVVTL----------ELPNDALDGQKIEVPAKCVRKQFRPGDHVKELHDLVQI 561
Query: 347 DNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDV 405
D + GV+ ++E E F+VL V +K +I + + K +V D N + V V D+
Sbjct: 562 DAQTAGVMFKIERETFKVLD---QHGHVVTLKPHQISMRRDSKRSVALDYNGHEVHVGDM 618
Query: 406 VRIVEGP-CKGKQGPVEHIYR-GILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNG 463
V+ VE P + +QG V HIY+ ++F+H+R + E+ G +++ + +
Sbjct: 619 VKEVEWPLTQFRQGQVLHIYQSALVFVHNRTYKENGGLFIVRANHIEPLAPTNVK----- 673
Query: 464 DAYSRFNSLRTPPRI--PQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGY 521
RT P P + G A G RGGR D G TV + GPYK Y
Sbjct: 674 --------PRTDPSQMNPALKAMDADAGANASGPRRGGR---DIYAGKTVAIVRGPYKTY 722
Query: 522 RGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTP 581
RG + + G RVEL + K++TV D++V P R +G P
Sbjct: 723 RGIIKETTGGMARVELHTMSKILTVPL----DHMVEKNPVTGESRRLVGPAAPAAAPAMA 778
Query: 582 LHPY----MTP--MRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDG---NPGSWG 632
++PY MTP A G +TP A+NPY P G NP
Sbjct: 779 MNPYAGGGMTPAYAGAAAGLAGAAGGKTP----AYNPYDGSRTPAYGVGMGQTPNPYGSA 834
Query: 633 TSPQYQPGSPPSRAYEAPTPGS-GWASTP----GGNYSDAGTPRDSSSTYVNAPSPYLPS 687
+P Y + Y TP G A+TP GG P + P+PY
Sbjct: 835 RTPAYPGMAHTPNPYGGRTPAYPGMAATPNPYGGGLMGQTPNPYGGGAPMGQTPNPYSAP 894
Query: 688 TP 689
TP
Sbjct: 895 TP 896
>gi|403214304|emb|CCK68805.1| hypothetical protein KNAG_0B03630 [Kazachstania naganishii CBS
8797]
Length = 959
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 153/567 (26%), Positives = 261/567 (46%), Gaps = 59/567 (10%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VE 66
G +L+I S+ D IYIEA K++ +++ C G+ IY Q+ L+P++E+ L +
Sbjct: 209 GKKLKILSIFQRDFNVGTIYIEAPKQSVIEKFCNGIPEIYPQRKKLIPVQELPATLKPNK 268
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL--------QALANK 118
S + L +VR+K G Y+GDLA V + V +K++PR+D Q K
Sbjct: 269 SDDVPLEEGNYVRIKRGVYRGDLAIVDQISENNLEVMLKIVPRLDYGKSDIVDPQTKQRK 328
Query: 119 LEGREVAKK--KPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYK 176
++ A + + P + D+A L+ R + DY DGFLYK
Sbjct: 329 MKNPTYANRPSRQLFNPTMALKEDQA-NLYKRDDHHFTYRNEDYI---------DGFLYK 378
Query: 177 TVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRK--KGHFMKGDAVIVIK 234
+ ++ + ++ P FD+ F + ++G+ D+ +S + K F GD V ++
Sbjct: 379 SFRIQYVDTKDAIPEFDDTTWFES--KDGKVDLTRISQTVKKHQASKVTFQAGDRVEILS 436
Query: 235 GDLKNLKGWVEKVDEENVHIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
G+ + KG+V K E ++ P++ L ++ L K FE G++V VVSG G +
Sbjct: 437 GEQRGSKGFVTKTTTEIATVKLPDLNPLEFPIST----LRKIFETGDNVTVVSGNHQGDS 492
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGV 353
G+V+ V Q + +S T++D+ + A+++ +S + T + +Y L D+V L
Sbjct: 493 GLVVSVRQGQVTFMSTQTRQDVTITANNLSKSIDSTATSS---EYALHDIVELSAKKVAC 549
Query: 354 IIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVE 410
II+ + F+V + D +V+ + I K+ + D N + + D+V VE
Sbjct: 550 IIQATHDFFKV---IDDAGKVSTINKWTILSKINPARTRVATVDSKGNEIKIGDMV--VE 604
Query: 411 GPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFN 470
++G V I+ LF + LE+AG SS+ + S+ N
Sbjct: 605 KLGARREGQVLFIHNQQLFAMSKKILENAGVFVVNSSNIEAMA-------------SKSN 651
Query: 471 SLRTPPRIPQSPGRYSRGGPPAGGRNRG-----GRGGHDALVGTTVKVRLGPYKGYRGRV 525
L T + + + G P + R G + +G TVKVR YKG G V
Sbjct: 652 ILNTRLDLNKMNPDFVSGMHPPSSTSTAPIAAPARMGREVALGKTVKVRTPGYKGALGIV 711
Query: 526 VDVKGQSVRVELESQMKVVTVDRSMIS 552
DV G VEL ++ K +TVD+ ++
Sbjct: 712 KDVSGDRATVELHTKNKHITVDKRKLT 738
>gi|52353367|gb|AAU43935.1| unknown protein [Oryza sativa Japonica Group]
Length = 1152
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 130/201 (64%), Gaps = 4/201 (1%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G+++ I S ALDH++ ++++EA+K V EACKG ++Y ++ VP+
Sbjct: 181 MQKYVDLQKFGTKVPIISAFALDHVRGFVFVEAEKACDVTEACKGFCSVYISRINSVPVA 240
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E+ +L+ +K +S TWVRMK G YKGDLA+VV D R+RV +KLIPR+DL+A++
Sbjct: 241 EVPSLLSSRAKPFAISPGTWVRMKTGIYKGDLAQVVSADEGRKRVMIKLIPRVDLRAISK 300
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
K+ G + K+ +P PR ++ E +ER+ D T D++E + G++FKDGFLYK
Sbjct: 301 KI-GGAIPLKEAAIPAPRLISSQELEFFGSHIERKHDRQTNDFYEVLDGLMFKDGFLYKR 359
Query: 178 VSMKSISAQNIQPTFDELEKF 198
V++ S+ IQPT EL KF
Sbjct: 360 VALSSLIYWGIQPTETELLKF 380
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/271 (30%), Positives = 125/271 (46%), Gaps = 30/271 (11%)
Query: 338 YELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNK 397
+ L DLVL FGV+I E + ++LKG P+ V + K +K D K
Sbjct: 446 FNLHDLVLFGRRDFGVVIAFEKDGLRILKGGPEGSAVTVRKQDIKDVCADKMLTAVDHKK 505
Query: 398 NTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVG---- 453
+ + D V ++EGP +GKQG V+H+Y GILFIH+ E++GF CA+ SSC V
Sbjct: 506 KIICINDTVNVLEGPFQGKQGVVKHLYMGILFIHNESESENSGFFCAQCSSCENVKKRKE 565
Query: 454 -GSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVK 512
S G+ + + F+ + R + P R +R +G ++
Sbjct: 566 LASFTFGNSDDNPIPMFSYEQNEQRDNERPYRSTR--------------EQLFSIGEMLR 611
Query: 513 VRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS------DNV--VVSTPY--- 561
+R GP KGY RVV + V V+L+S +K+VTV +S DN S P+
Sbjct: 612 IRKGPMKGYLCRVVRIFRNDVTVKLDSLLKIVTVQAEFLSVPAKRGDNSSGAPSGPFGSE 671
Query: 562 RDTPRYGMGSETPMHPSRTPLHPYMTPMRDA 592
D P + G + S P P+++A
Sbjct: 672 ADKPSWDNGLPSFGSDSWQPFSSAALPVQNA 702
>gi|222632160|gb|EEE64292.1| hypothetical protein OsJ_19129 [Oryza sativa Japonica Group]
Length = 1559
Score = 173 bits (438), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/201 (42%), Positives = 130/201 (64%), Gaps = 4/201 (1%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G+++ I S ALDH++ ++++EA+K V EACKG ++Y ++ VP+
Sbjct: 181 MQKYVDLQKFGTKVPIISAFALDHVRGFVFVEAEKACDVTEACKGFCSVYISRINSVPVA 240
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E+ +L+ +K +S TWVRMK G YKGDLA+VV D R+RV +KLIPR+DL+A++
Sbjct: 241 EVPSLLSSRAKPFAISPGTWVRMKTGIYKGDLAQVVSADEGRKRVMIKLIPRVDLRAISK 300
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
K+ G + K+ +P PR ++ E +ER+ D T D++E + G++FKDGFLYK
Sbjct: 301 KI-GGAIPLKEAAIPAPRLISSQELEFFGSHIERKHDRQTNDFYEVLDGLMFKDGFLYKR 359
Query: 178 VSMKSISAQNIQPTFDELEKF 198
V++ S+ IQPT EL KF
Sbjct: 360 VALSSLIYWGIQPTETELLKF 380
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 132/333 (39%), Gaps = 96/333 (28%)
Query: 338 YELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIK--CKLEKKSNVQDR 395
+ L DLVL FGV+I E + ++LKG P+ V V+ ++IK C +K D
Sbjct: 446 FNLHDLVLFGRRDFGVVIAFEKDGLRILKGGPEGSAV-TVRKQDIKDVC-ADKMLTAVDH 503
Query: 396 NKNTVAVKDVVRIVEGPCK-----GKQ--GPVEHIYR----------------------- 425
K + + D V ++EGP + GKQ +E+++R
Sbjct: 504 KKKIICINDTVNVLEGPFQRDGAMGKQPGMALENLHRSKRDVRRGLRERWGDGMEIEVSR 563
Query: 426 ----------------------------GILFIHDRHHLEHAGFICAKSSSCVVVG---- 453
GILFIH+ E++GF CA+ SSC V
Sbjct: 564 VPKSSTVTVLRTGHDGEGKQGVVKHLYMGILFIHNESESENSGFFCAQCSSCENVKKRKE 623
Query: 454 -GSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDAL--VGTT 510
S G+ + + F+ + R + P R +R + L +G
Sbjct: 624 LASFTFGNSDDNPIPMFSYEQNEQRDNERPYRSTR----------------EQLFSIGEM 667
Query: 511 VKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS------DNV--VVSTPY- 561
+++R GP KGY RVV + V V+L+S +K+VTV +S DN S P+
Sbjct: 668 LRIRKGPMKGYLCRVVRIFRNDVTVKLDSLLKIVTVQAEFLSVPAKRGDNSSGAPSGPFG 727
Query: 562 --RDTPRYGMGSETPMHPSRTPLHPYMTPMRDA 592
D P + G + S P P+++A
Sbjct: 728 SEADKPSWDNGLPSFGSDSWQPFSSAALPVQNA 760
>gi|365984345|ref|XP_003669005.1| hypothetical protein NDAI_0C01010 [Naumovozyma dairenensis CBS 421]
gi|343767773|emb|CCD23762.1| hypothetical protein NDAI_0C01010 [Naumovozyma dairenensis CBS 421]
Length = 992
Score = 172 bits (436), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 147/553 (26%), Positives = 265/553 (47%), Gaps = 33/553 (5%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 250 KLKILSIFQRDNYVGRIYIEAPKQSVIEKFCNGVPDIYIAQKLLIPVQELPLLLKPNKSD 309
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ LS +VR+K G Y+GDLA V + V +K++PR+D + + + +K
Sbjct: 310 DVTLSEGNYVRIKRGIYRGDLALVDQISENNLDVMLKIVPRLDYGKFDEIDPVTNQRKSK 369
Query: 127 KKPFV--PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
+ + P + N A L +RD D+ + DG+LYK+ ++ +
Sbjct: 370 RATYAHRAPAQLFNPTMALRLDQANLYKRD----DHHFTYKNEDYIDGYLYKSFRIQYVE 425
Query: 185 AQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGDLKNLKG 242
+NIQPT +EL KF + ++G D+ ++S A + F GD V ++ G+ + KG
Sbjct: 426 TKNIQPTVEELAKFGS--KDGAVDLTTISQTIKKAQAARVTFQPGDRVEILSGEQRGSKG 483
Query: 243 WVEKVDEENVHIR-PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQ 301
V + ++ P P V S L K FEPG+HV +++G G G+VL V+Q
Sbjct: 484 IVVGTTTDIATVKLPSYPLKPLEFPVLS--LRKIFEPGDHVTIINGEHQGDAGLVLMVDQ 541
Query: 302 HVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEA 361
+ +S+ +E++ + A+++ +S + T + +Y L D++ L + II+ +
Sbjct: 542 GQVTFMSNQNREEVTITANNLSKSIDSTPTSS---EYSLHDIIELSAKNVACIIQAGHDI 598
Query: 362 FQVLKGVPDRPEVALVKLREIKCKLE---KKSNVQDRNKNTVAVKDVVRIVEGPCKGKQG 418
F+V + + +V+ + I K+ + D N N + + D IVE ++G
Sbjct: 599 FKV---IDETGKVSTITKGTILGKVNTARSRVTTVDGNGNEIKIGD--SIVEKLGARREG 653
Query: 419 PVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRI 478
V +I +F+ + E+AG ++ V + ++ + + P I
Sbjct: 654 QVLYIQTQQIFVVSKKIAENAGVFVVNPANVETVSA------KENLLNNKLDLNKMNPDI 707
Query: 479 PQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELE 538
G P + R G + +G TV++RL YKG G V DV G VEL
Sbjct: 708 ISQMGPPGSSSPNTTFQKPQMRTGREVALGKTVRIRLAGYKGQLGIVKDVNGDKATVELH 767
Query: 539 SQMKVVTVDRSMI 551
S+ K +TVD++ +
Sbjct: 768 SKNKHITVDKTKL 780
>gi|116203851|ref|XP_001227736.1| hypothetical protein CHGG_09809 [Chaetomium globosum CBS 148.51]
gi|88175937|gb|EAQ83405.1| hypothetical protein CHGG_09809 [Chaetomium globosum CBS 148.51]
Length = 971
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 200/723 (27%), Positives = 310/723 (42%), Gaps = 148/723 (20%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA ++ + A G+ ++Y + K++LV +++M D+L V K +L WVR+
Sbjct: 280 MKGYIYVEARRQNDIMIALDGVLDVYPRTKMVLVELKDMPDLLRV-MKTPNLEPGAWVRL 338
Query: 81 KI-GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEG---REVAKKKPFVPPPRF 136
K Y GDLA+V+DV V+ IPR+D L G R+ PP R
Sbjct: 339 KKPAKYAGDLAQVLDVTENGLEARVRYIPRLDYGVRDEILTGDGKRKRPGMPGPRPPQRL 398
Query: 137 MNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELE 196
+ EAR+ R + + +P T + N G F++GFL K + ++ + +++ PT +E+
Sbjct: 399 FSEVEARKRQPR-QIQGNPQTNTWIYN--GDDFENGFLVKDIKIQQLDVKDVNPTLEEVT 455
Query: 197 KFRTPGENGESDIASLSTLFANRKKGH----FMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
KF + E+G ++ L L A+ K + ++ GD + V +G+ + + G V V + V
Sbjct: 456 KFASGSEDGTENL-DLKALAASLKDSNTNVAYVPGDVIEVYEGEQRGVVGKVANVQGDIV 514
Query: 253 HIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQA-GATGMVLKVEQHVLIILSDT 310
+R L +T+ V +K L K F+ G+HVKV+ G++ GM++K+ + +L+D
Sbjct: 515 TLRVTEGDLAGQTIEVPNKGLRKLFKTGDHVKVIGGSRFRDEVGMIVKIVDDRITLLTDQ 574
Query: 311 TKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPD 370
T ++ VF+ D+ E+S++ G IG Y L DLV LD + I++V D
Sbjct: 575 TNTEVTVFSKDLREASDIG-GQGSIGQYSLLDLVQLDPTTVACIVKV------------D 621
Query: 371 RPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFI 430
R E +V R + + D N T
Sbjct: 622 R-ESMVVWTRTV---------IPDSNATT------------------------------- 640
Query: 431 HDRHHLEHAGFICAKSS--SCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRG 488
E+AG ++ S + G RA +G S N P + ++P +
Sbjct: 641 ------ENAGVFVTRAGNVSTIAAKGGRATNPNSGPDLSAMN-----PALKRNPAQNQAM 689
Query: 489 GPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDR 548
PP G D +G TV +R G YK G V D RVEL + K+V++ +
Sbjct: 690 QPPK-------TFGRDRALGQTVSIRRGGYKALMGIVKDTSETHARVELHGKNKIVSIAK 742
Query: 549 S--MISDNVVVST---------------------PYRDTPRYGMGSETPMHP---SRTPL 582
+ + D V T D P GS TPM RTP
Sbjct: 743 ADLIFKDRVTGKTIDIYSRSGRGGFGGGAGRGGFGAGDRP---GGSRTPMGAGGGERTPA 799
Query: 583 ------HPYMTPM---RDAGATPIHDGM----RTPM----RDRAWNPYTP---MSPPRDN 622
Y+ P +A TP HDG +TP + W TP +S P
Sbjct: 800 WGAPKGEFYLLPCVQGLNANYTPAHDGFGHGSKTPAYGAGNNDPWGSKTPAYGVSAPTPG 859
Query: 623 WEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGW-ASTPGG-NYSDAGTPRDSSSTYVNA 680
+ SWG +P G AY+APTPG+G A TP N G + V A
Sbjct: 860 ASGAD--SWGYTPGASGG-----AYDAPTPGAGLGAPTPAALNAPTPGAYSAPTPAAVGA 912
Query: 681 PSP 683
P+P
Sbjct: 913 PTP 915
>gi|385304962|gb|EIF48961.1| putative rna pol ii transcription elongation factor [Dekkera
bruxellensis AWRI1499]
Length = 961
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 158/579 (27%), Positives = 266/579 (45%), Gaps = 57/579 (9%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVLA-VESKAI 70
+ S D + YIY+EA + V G+ IY + +LVPI E D+L + +
Sbjct: 51 VYSAFQRDDFEGYIYVEARRIDVVDRILSGIPGIYITXGKVLVPIDEYPDLLRPGKPEDH 110
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGR--EVAKKK 128
++ ++VR++ G YKGDL V ++ + VKLIPR+D L GR K
Sbjct: 111 EVKPGSYVRIRSGKYKGDLGIVDNLADNGLEARVKLIPRLDYGRGVGSLTGRGHRGYHKG 170
Query: 129 PFVPPPRFMNVDEAREL---HIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISA 185
PP + + A + H+ R T F + DG+L+K +SM +
Sbjct: 171 MARPPQKLFSQYSASQYDPEHLTTAR-----TERNFFVYRNEEYIDGYLFKDISMTHLVM 225
Query: 186 QNIQPTFDELEKFRTPGENGESDI----------ASLSTLFANRKKGH-----FMKGDAV 230
++I+PT ELE F +N I ++ + + KK F GD +
Sbjct: 226 KDIRPTLRELELFGMGKDNNAQXIDNEAEGGSMPVDINKMARSLKKXQISSILFQPGDRI 285
Query: 231 IVIKGDLKNLKGWVEKVDEENVHIRPEMKGLP--KTLAVNSKELCKYFEPGNHVKVVSGT 288
+V G+ + G V V ++ +K P + + V + L K F PG+HV VV G
Sbjct: 286 VVSSGEQTGMHGHVTSVAGNGKIVQVILKDGPAKEEVEVPASALRKVFLPGDHVTVVRGV 345
Query: 289 QAGATGMVLKVEQHVLIILSDTTKEDIRVFADDV------------VESSEVTTGITKIG 336
+G +GM+++V++ + ++SD T +D+ VFA+ + ES+E G
Sbjct: 346 HSGESGMIVQVQRKQVTLISDQTGKDVTVFANYLQRSVDRGALNMATESTEQEDADDGDG 405
Query: 337 D----YELRDLVLLDNNSFGVIIRVESEAFQVLK--GVPDRPEVALVKLREIKCKLEKKS 390
+ +EL +V L+ G++IRVE A +L+ G R E + + KL++ +
Sbjct: 406 ESSATFELHQIVRLNPTDVGLVIRVEKNALTILRTDGFTVRVEPEQI---QSAVKLDRMT 462
Query: 391 N-VQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSC 449
DR N V V DV++ + G + +QG V H++R LF+ + +E++G + +
Sbjct: 463 EKTTDRFGNEVKVGDVIKEIHG--EKRQGNVLHVFRTTLFVRSKSIVENSGLFVVDADTV 520
Query: 450 VVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGT 509
++ + A+ N A + + + P +P R + P + GG D +
Sbjct: 521 QIL-SAHADISTNSPAVAISGAFKMPDLSRMNPNRMAH---PQINVSSXKFGGRDPTIHQ 576
Query: 510 TVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDR 548
V VR GPYKG +G V D G RVE+ + K+V +++
Sbjct: 577 YVSVRKGPYKGKKGLVKDANGSMARVEMHNPAKIVAINK 615
>gi|357438257|ref|XP_003589404.1| Global transcription factor group [Medicago truncatula]
gi|355478452|gb|AES59655.1| Global transcription factor group [Medicago truncatula]
Length = 239
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/133 (66%), Positives = 106/133 (79%), Gaps = 6/133 (4%)
Query: 1 MQKCI---DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M KC+ ++ S + + S IALDHLKNYIY+EADKEAHV+E +++ LVPIR
Sbjct: 106 MVKCVIGRERESAVCLISAIALDHLKNYIYVEADKEAHVREVLSS--QYIGRQITLVPIR 163
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
EMTDVL+VESKAIDL+RDTW+RMKIG Y+G + ++VDNVRQ+VTVKLIPRIDLQALAN
Sbjct: 164 EMTDVLSVESKAIDLARDTWIRMKIGTYEGGPCQ-MNVDNVRQKVTVKLIPRIDLQALAN 222
Query: 118 KLEGREVAKKKPF 130
KLEGREV KKK F
Sbjct: 223 KLEGREVVKKKTF 235
>gi|255717859|ref|XP_002555210.1| KLTH0G04004p [Lachancea thermotolerans]
gi|238936594|emb|CAR24773.1| KLTH0G04004p [Lachancea thermotolerans CBS 6340]
Length = 1085
Score = 169 bits (427), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 152/561 (27%), Positives = 269/561 (47%), Gaps = 60/561 (10%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE-SK 68
+L+I S+ D+ IYIEA K++ +++ G+ +IY + +L+P++E+ +L + S
Sbjct: 336 KLKIMSIFQRDNYSGRIYIEAPKQSVIEKFTTGVPDIYPAQKLLIPVQELPLLLKPDKSD 395
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID------LQALANKLEGR 122
+ L ++VR+K G YKGDLA V + V +K++PR+D + A N +
Sbjct: 396 DVRLEEGSYVRIKRGIYKGDLAVVDQISENNLEVLLKIVPRLDYGKNDEIDADTNTRK-- 453
Query: 123 EVAKKKPFV---PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGF 173
+K+P PPP+ N +D+A L+ R +R DY DG+
Sbjct: 454 ---QKRPTFAQRPPPQLFNPTMALRMDQA-NLYKRDDRHFTYRNDDYV---------DGY 500
Query: 174 LYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVI 231
L+K+ ++ + +NIQP+ +EL +F + + G D+ ++S A K F GD V
Sbjct: 501 LFKSFRIQYLETKNIQPSVEELARFGS--KEGNLDLTTISQTIKKAQAAKVTFQIGDRVE 558
Query: 232 VIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAG 291
V+ G+ K KG+V + + + + G+ K L L K FE G+HV VV G G
Sbjct: 559 VLSGEQKGSKGFVTRTSMDIIAVNLPQLGM-KALEFPISSLRKIFEAGDHVTVVGGDHQG 617
Query: 292 ATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSF 351
G+VL V+ + +SD T+ ++ + A+++ +S + T + +Y L D+V L +
Sbjct: 618 DAGLVLAVKNGQVTFVSDQTRANLTISANNLSKSMDSTPTSS---EYALHDIVELSAKNV 674
Query: 352 GVIIRVESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVR 407
+I+ + F++L D +V+ + L++I + + V ++ + + + D V
Sbjct: 675 ACVIQAGHDIFKIL---DDTGKVSTITKGSILKKINTARSRLTTVDNKGRE-IKIGDTV- 729
Query: 408 IVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYS 467
VE ++G V +I +FI + E+AG + V A+ D
Sbjct: 730 -VEKVGARREGQVLYIQTQQIFIVSKKITENAGVFVVNPMNVEAV----ASKDNLIAGVG 784
Query: 468 RFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVD 527
+ R P + ++ PP + G D +G TV++R YKG G V D
Sbjct: 785 SMDLSRMNPDV------VAKMRPPQQSAQQASV-GRDVALGKTVRIRSAGYKGQLGIVKD 837
Query: 528 VKGQSVRVELESQMKVVTVDR 548
V G+ +EL S+ K +T+D+
Sbjct: 838 VNGEKATIELHSKNKHITMDK 858
>gi|224109844|ref|XP_002315331.1| predicted protein [Populus trichocarpa]
gi|222864371|gb|EEF01502.1| predicted protein [Populus trichocarpa]
Length = 1697
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 137/235 (58%), Gaps = 32/235 (13%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G++LQI S A+DH ACKGL +IYS +V P
Sbjct: 150 MQKFVDLKSLGTKLQIISAFAIDH-----------------ACKGLCSIYSSRVAPFPKN 192
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E++ ++++ ++ TW R+K GNYKGDLA++V V++VR++ TVKLIPRID QALA
Sbjct: 193 EVSHLISIRRGCNQVTEGTWARVKNGNYKGDLAQIVAVNDVRKKATVKLIPRIDFQALAQ 252
Query: 118 KL----------EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGM 167
K G +AKKK +P PR ++ E E ++ RRD TG FE + G+
Sbjct: 253 KFVNGGFLHYVPMGGGLAKKKAAIPAPRLISSSELEEFRPLIQYRRDRDTGKMFEVLDGL 312
Query: 168 LFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES-DIASLSTLFANRKK 221
+ KDG+LYK VS+ S+S + P+ +EL KF+ P EN ES ++ L+ ++ +KK
Sbjct: 313 MLKDGYLYKRVSIDSLSCMGVIPSEEELLKFK-PSENNESENLEWLAQIYVGQKK 366
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 130/226 (57%), Gaps = 17/226 (7%)
Query: 338 YELRDLVLLDNNSFGVIIRVE-SEAFQVLKGVPDRPEVALVKLREIKCKL-EKKSNVQDR 395
+EL +LV FG+++ +E +++++LK ++P+V V LR++K L + K D
Sbjct: 389 FELYNLVCFGRKDFGLVVGMEKDDSYKILKHGLEKPDVVTVALRDLKNGLTDMKFTALDH 448
Query: 396 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGS 455
+K T++V D V+++EGP K +QG V+ IYRGI+FI+D++ E G+ C+K+ C + S
Sbjct: 449 HKKTISVNDSVKVLEGPLKDRQGIVKQIYRGIIFIYDQNETEDGGYFCSKAQMCEKIKLS 508
Query: 456 -RANGDRNGDA----YSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRG-GRGGHDAL--V 507
A ++G++ + F S P P+ P + S NR +G D L +
Sbjct: 509 FDACCGKDGESGSLDFEDFPSSPKSPLSPKRPWQASE-------NNRNFNQGDKDGLFFI 561
Query: 508 GTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISD 553
G T+++R+GP KGY +V+ ++ V V+L SQ KV+TV +S+
Sbjct: 562 GQTLRIRIGPLKGYLCQVLAIRYSDVTVKLGSQQKVLTVKSEHLSE 607
>gi|422295799|gb|EKU23098.1| transcription initiation protein spt5, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 161 bits (407), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/468 (28%), Positives = 220/468 (47%), Gaps = 31/468 (6%)
Query: 23 KNYIYIEADKEAHVKEACKG-LRNIYSQKVMLVPIREMTDVLAVESKAID--LSRDTWVR 79
K ++ IEA EA A + R I SQ++ +V R M LAV K L WVR
Sbjct: 43 KGHVLIEARNEADASAAIRANSRFILSQRLEVVEYRYMATSLAVSEKVAPRPLRDGQWVR 102
Query: 80 MKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA-NKLEGREVAKKKPFVPPPRFMN 138
K G YKGDLA+V+ + +V ++++PRI+ + +A N G P P+F +
Sbjct: 103 FKRGLYKGDLARVMAILEGGSKVVIEMVPRINYEDMARNPRAGNIYVVSAASRPGPKFFS 162
Query: 139 VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKF 198
EARE + + R + P + + + +G+L K V +S+ A+NI + +E+ KF
Sbjct: 163 ASEAREHEVVLHRGKIPGLNMPCDVACNLHYMNGYLVKEVKPESLQAENINASVEEVTKF 222
Query: 199 ------RTPGENGESDIASLS-----TLFANRKKGH-FMKGDAVIVIKGDLKNLKGWVEK 246
G E + + T RK F +GDAV V+ G+L+NL V
Sbjct: 223 GLGALAEDDGRGHEERLQAAQREAEETQEQQRKNLRVFEQGDAVKVVAGELRNLVCRVLG 282
Query: 247 VD--EENVHIRPEM--KGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQH 302
D V +RP GLP + + + +L + E G HVKV+ G AG TGMV + H
Sbjct: 283 SDPTTGTVSVRPVNPNLGLPVKIELQASQLANHVEVGQHVKVLDGLFAGETGMVQALLSH 342
Query: 303 ----------VLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFG 352
++ +L+D +++RV V ES++V TG++ + Y L D+V FG
Sbjct: 343 DEHGAPVPEPIVSVLTDGENKELRVRLGQVKESADVATGMSSLSGYSLHDMVCYGYQRFG 402
Query: 353 VIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVE-G 411
VI+ + E+ +VL V L +L+ + + ++ D N + V+D V + + G
Sbjct: 403 VIVWLGRESVKVLDSSGVVQSVPLGELQGNRNRRSHQAAAYDSMNNRMQVEDQVLVTDRG 462
Query: 412 PCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANG 459
K+G ++HI L+I + ++G ++ + + R N
Sbjct: 463 EHFQKRGAIKHILGSSLWIFTKQETRNSGLFVVRTRAVTLQNLIRKNA 510
>gi|380487091|emb|CCF38271.1| transcription elongation factor SPT5 [Colletotrichum higginsianum]
Length = 693
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 225/422 (53%), Gaps = 33/422 (7%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K YIY+EA++ + A G+ N+Y + K++LV I++M D+L V +K L WVR+
Sbjct: 259 MKGYIYVEANRSTDIMVALDGMFNVYPRSKMILVDIKDMPDLLRV-TKTPTLEPGAWVRL 317
Query: 81 -KIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL----QALANKL--EGREVAKKKPF--- 130
K + GDLA+V+DV V+ IPR+D ALA+ L +G+ +K+P
Sbjct: 318 RKPAKHAGDLAQVIDVTENGLEARVRFIPRLDYGMRDDALASALTLDGK---RKRPIGMA 374
Query: 131 --VPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNI 188
PP R N EAR+ H R + +P T + N G F++GF K + ++ + ++
Sbjct: 375 GPRPPQRLFNETEARKRHPR-HIQGNPTTKVW--NYMGDEFENGFQVKDIKIQQLVVTDV 431
Query: 189 QPTFDELEKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVE 245
PT +E+ +F + E+G ++ A S+L + ++ GD + V +G+ K + G
Sbjct: 432 NPTLEEVTRFASGAEDGTENLDLKALASSLKDSNINVTYLPGDIIEVYEGEQKGVVGKAT 491
Query: 246 KVDEENVHIRPEMKGLP-KTLAVNSKELCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHV 303
V + V ++ L + + V +K L K F G+HVKV SG++ GMV+K+ +
Sbjct: 492 NVQGDIVTMQVTEGVLAGQVIEVPTKGLRKRFRVGDHVKVTSGSRFRDEVGMVVKISEDR 551
Query: 304 LIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQ 363
+ L+D T ++ VF+ D+ E+S++ G +G YEL DLV LD + G I++V+ E+
Sbjct: 552 VTFLTDQTNTEVTVFSKDLREASDIG-GQGSLGQYELFDLVQLDPTTVGCIVKVDRESVV 610
Query: 364 VLKGVPDRPEVALVKLREIKCKLEKK--SNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVE 421
VL D +V +I KL K+ + DRN + + + DVVR G + +QG +
Sbjct: 611 VLDQNGDTRQVM---PSQIANKLPKRKIAVAADRNGSEIRLDDVVREYGG--QQRQGKII 665
Query: 422 HI 423
H+
Sbjct: 666 HM 667
>gi|340052470|emb|CCC46750.1| putative transcription initiation protein [Trypanosoma vivax Y486]
Length = 733
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 217/462 (46%), Gaps = 41/462 (8%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKA 69
+L I SV +LDH++ YIYIEA ++A V+ A GL ++ + + LV E+ ++
Sbjct: 244 DLGIISVFSLDHVQEYIYIEAHRKAFVENALNGLEGLFCRNISLVSPTELLQMMEQRHST 303
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKP 129
+ ++VR++ Y+ D+A+VV+VD+ +RVTVK++PR D L EV +
Sbjct: 304 DKIHVGSFVRLRQKQYRLDIAQVVEVDHTSRRVTVKVVPREDF--LGKSYIKSEVRPPQR 361
Query: 130 FVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF-KDGFLYKTVSMKSISA--Q 186
P NV +ER G+Y+ G + F KDG+L +S + + A +
Sbjct: 362 LFVPSLATNV---------LER------GEYY-FWGQLKFDKDGYLLLNISQRMVIAGSK 405
Query: 187 NIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH--FMKGDAVIVIKGDLKNLKGWV 244
+PT +EL F +N + T FA+ H G+ V V G L+ + G +
Sbjct: 406 MEKPTVEELAVFH---DNDRERVRQTITRFAHSNPQHSELRIGNTVRVASGQLQGMIGAI 462
Query: 245 EKV--DEENVHIRPEMKGLPKT--LAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
E + D V + + G + L V K+FE G HV V SG AG +G V+K
Sbjct: 463 ENIFTDTSTVALSYRVPGKAASIKLRVELSACVKHFEEGAHVIVDSGDHAGESGTVVKTS 522
Query: 301 QHVLIILSD--TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL-DNNSFGVIIRV 357
V+ ILSD T + V A+D +S+ V + +G ++L DLVLL D +S G I+R+
Sbjct: 523 DDVVYILSDRATASREFVVRANDCRQSNLVGSFSHTLGSWKLFDLVLLPDASSVGCIVRL 582
Query: 358 ESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCK--- 414
VL DR E + +IK DR N + V I P
Sbjct: 583 NRNDVCVL---TDRRETRYLSAVQIKAVTAGTRRTTDRLSNIITRGSEVNIEADPSLPYY 639
Query: 415 --GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
G+ G VE ++ LF+ R E+AG ++ +V GG
Sbjct: 640 LVGQTGRVEQVFNTTLFVRVRGVRENAGLTVVSANHVLVFGG 681
>gi|407866804|gb|EKG08392.1| transcription initiation protein, putative [Trypanosoma cruzi]
Length = 719
Score = 154 bits (389), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 143/463 (30%), Positives = 216/463 (46%), Gaps = 43/463 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKA 69
+L I SV LDH+K YIYIEA ++ V+ A KGL ++ K+ LV E+ ++
Sbjct: 230 DLGIISVFCLDHVKEYIYIEAHRKVFVENALKGLDGLFRYKITLVNPSELMQMMERRPSP 289
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL-ANKLEGREVAKKK 128
L ++VR++ Y+ DLA+VV+V + +VTVK++PR D NK+E R
Sbjct: 290 EKLRVGSFVRLRQRQYRLDLAQVVEVHPISNQVTVKVVPREDFVGKPFNKIEMR------ 343
Query: 129 PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF-KDGFLYKTVSMKS-ISAQ 186
PPRF L V+ R GD++ G + F K+G+L KTVS + IS
Sbjct: 344 ---LPPRFF----VPTLAAYVQER-----GDFY-RWGDLTFDKEGYLLKTVSSRMVISGT 390
Query: 187 NIQ-PTFDELEKFRTPGENGESDIASLSTLFAN--RKKGHFMKGDAVIVIKGDLKNLKGW 243
++ PT +E+ F N + FA+ + G+ V V+ G L+ G
Sbjct: 391 KMENPTVEEIALF---FNNDRERVREAVARFASVGHQGADLRIGNTVRVVSGQLRETVGT 447
Query: 244 VEKV--DEENVHIRPEMKGL--PKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
+E + D V + + G P + V K+F G HV V SG +AG +G V+
Sbjct: 448 IENIFLDTNTVSLLCPVPGRKEPIKVRVELAACVKHFALGTHVIVSSGERAGESGTVVNS 507
Query: 300 EQHVLIILSD--TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL-DNNSFGVIIR 356
V+ I SD T ++ V A D +S+ + + G + L DLV+L D +S G I+R
Sbjct: 508 SGDVVYIFSDRATASRELTVCASDCHQSNLIGSFGHTSGSWRLFDLVMLADTSSVGCIVR 567
Query: 357 VESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP---- 412
+ VL DR E V +IK + DR N V V I P
Sbjct: 568 INRNDICVL---TDRSETRYVSPMQIKAAVASPRQTTDRLNNIVTRGAEVIIQTSPNTPY 624
Query: 413 -CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
G+ G VE ++ LF+ R E+AG + + S +++GG
Sbjct: 625 HLVGQTGRVEQLFGSTLFVRVRSVKENAGLVVLDARSVLLIGG 667
>gi|71649546|ref|XP_813491.1| transcription initiation protein [Trypanosoma cruzi strain CL
Brener]
gi|70878379|gb|EAN91640.1| transcription initiation protein, putative [Trypanosoma cruzi]
Length = 720
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 214/462 (46%), Gaps = 41/462 (8%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKA 69
+L I SV LDH+K YIYIEA ++ V+ A GL ++ K+ LV E+ ++
Sbjct: 231 DLGIISVFCLDHVKEYIYIEAHRKVFVENALNGLDGLFRYKITLVNPSELMQMMERRPSP 290
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKP 129
L ++VR++ Y+ DLA+VV+V + +VTVK++PR D + KK
Sbjct: 291 EKLRVGSFVRLRQRQYRLDLAQVVEVHPISNQVTVKVVPREDFVG--------KPFKKIE 342
Query: 130 FVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF-KDGFLYKTVSMKS-ISAQN 187
PPRF L V+ R GD++ G + F K+G+L KTVS + IS
Sbjct: 343 IRLPPRFF----VPTLAAYVQER-----GDFYR-WGDLTFDKEGYLLKTVSSRMVISGTK 392
Query: 188 IQ-PTFDELEKFRTPGENGESDIASLSTLFAN--RKKGHFMKGDAVIVIKGDLKNLKGWV 244
++ PT +E+ F N + FA+ + G+ V V+ G L+ G +
Sbjct: 393 MENPTVEEIALF---FNNDRERVREAVARFASVGHQGADLRIGNTVRVVSGQLRETVGTI 449
Query: 245 EKV--DEENVHIRPEMKGL--PKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
E + D V + + G P + V K+F G HV V SG +AG +G V+K
Sbjct: 450 ENIFLDTNTVSLSCPVPGRKEPIKVRVELAACVKHFALGTHVIVSSGERAGESGTVVKSS 509
Query: 301 QHVLIILSD--TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL-DNNSFGVIIRV 357
VL I SD T ++ V A D +S+ + + G + L DLV+L D +S G I+R+
Sbjct: 510 GDVLYIFSDRATASRELTVCASDCHQSNLIGSFGHTSGSWRLFDLVMLADTSSVGCIVRI 569
Query: 358 ESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP----- 412
VL DR E + +IK + DR N V V I P
Sbjct: 570 NRNDICVL---TDRSETRYLSPMQIKAAVASPRQTTDRLNNIVTRGAEVIIQTSPNTPYH 626
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
G+ G VE ++ LF+ R E+AG + + S +++GG
Sbjct: 627 LVGQTGRVEQLFGSTLFVRVRSVKENAGLVVLDARSVLLIGG 668
>gi|294938792|ref|XP_002782201.1| histidyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
gi|239893699|gb|EER13996.1| histidyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
Length = 1267
Score = 153 bits (387), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 222/470 (47%), Gaps = 43/470 (9%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL--- 63
KG + I S A D LK YIYIE H+K G+R I + V +VP EM V
Sbjct: 265 KGVKTGILSAFASDSLKGYIYIEGKSVNHIKRFVTGIRQINTNSVKVVPATEMLGVFRSA 324
Query: 64 --AVESKAIDLSRDTWVRMKIG-NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQA----LA 116
A + + + L WVR+K Y DLA+VV+ ++ V VK+ PRI+ +
Sbjct: 325 QEAAKGRFVPLKMGEWVRIKRHPIYSNDLAQVVECFDMD--VEVKIRPRINYEEDPREAH 382
Query: 117 NKLEGREVAKKKPFVPPPRFMNVDEARE-----LHIRVERRRDPMTGDYFENIGGMLFKD 171
+ L GR KK P F + EA RV R + F+ +KD
Sbjct: 383 SALFGRRTTKKPR--PHASFFDPIEAENRGGQGAVERVRYRTATNPNEVFDQYRNERYKD 440
Query: 172 GFLYKTVSMKSI-SAQNIQPTFDELEKFR-TPGENGESDIA------SLSTLFANRKKGH 223
G+LY+ ++ + ++QP+ E+ +F + GE S+S +R
Sbjct: 441 GYLYRRFKRNALLTGDDVQPSITEISEFLGSAAAGGEGQALLAAAAASMSEASGSRAAAA 500
Query: 224 FMKGDAVIVIKGDLKNLKGWVEKVDEEN--VHIRPEMKGLPKTLAVNSKELCKYFEPGNH 281
GD+V+V GD+KNL+G V +D + V++ P T+A+ K+L K+F+ G+H
Sbjct: 501 LSVGDSVVVNGGDMKNLRGRVVTIDTDRRRVNVDPGHGRAQVTVAI--KDLSKHFDMGDH 558
Query: 282 VKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELR 341
VK++ G AG TG V+K++ V IL+D +++ + ++ +S+V+ GI KIG Y++
Sbjct: 559 VKILDGASAGDTGTVIKLDGSVATILTDNEPREVKCQSSNLKLTSDVSKGIEKIGQYKVG 618
Query: 342 DLVLLD---NNSFGVIIRVESEAFQV-LKGVPDRPEVALVKLREIKCKLEKKSNV---QD 394
DLV L+ ++ GVI+ + + + G +RP V + SNV D
Sbjct: 619 DLVTLNVSGSSGVGVIVSIAASGTTAKIIGNDNRPRNVPVG----SLGRHRDSNVVFLMD 674
Query: 395 RNKNTVAVKDVVRIVE-GPCKGKQGPVEHIYRGILFIHDRHHLEHAGFIC 443
N N +++I+ P GK V+HI + ++ LE G +
Sbjct: 675 VNNNPFKPGALLKILAPHPLAGKGAQVKHIMNNVAWVKVNDRLEDGGIVA 724
>gi|71661514|ref|XP_817777.1| transcription initiation protein [Trypanosoma cruzi strain CL
Brener]
gi|70882989|gb|EAN95926.1| transcription initiation protein, putative [Trypanosoma cruzi]
Length = 720
Score = 150 bits (378), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 139/462 (30%), Positives = 213/462 (46%), Gaps = 41/462 (8%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKA 69
+L I SV LDH+K YIYIEA ++ V+ A GL ++ K+ LV E+ ++
Sbjct: 231 DLGIISVFCLDHVKEYIYIEAHRKVFVENALNGLDGLFRYKITLVNPSELMQMMERRPSP 290
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKP 129
L ++VR++ Y+ DLA+VV+V + +VTVK++PR D + KK
Sbjct: 291 EKLRVGSFVRLRQRQYRLDLAQVVEVHPISNQVTVKVVPREDFVG--------KPFKKIE 342
Query: 130 FVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF-KDGFLYKTVSMKS-ISAQN 187
PPRF L V+ R GD++ G + F K+G+L KTVS + IS
Sbjct: 343 IRLPPRFF----VPTLAAYVQER-----GDFYR-WGDLTFDKEGYLLKTVSSRMVISGTK 392
Query: 188 IQ-PTFDELEKFRTPGENGESDIASLSTLFAN--RKKGHFMKGDAVIVIKGDLKNLKGWV 244
++ PT +E+ F N + FA+ + G+ V V+ G L+ G +
Sbjct: 393 MKNPTVEEIALF---FNNDRERVREAVARFASVGHRGADLRIGNTVRVVSGQLRETVGTI 449
Query: 245 EKV--DEENVHIRPEMKGL--PKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE 300
E + D V + + G P + V K+F G HV V SG +AG +G V+
Sbjct: 450 ENIFLDTNTVSLSCPVPGRKEPIKVRVELAACVKHFALGTHVIVSSGERAGESGTVVNSS 509
Query: 301 QHVLIILSD--TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL-DNNSFGVIIRV 357
V+ I SD T ++ V A D +S+ + + G + L DLV+L D +S G I+R+
Sbjct: 510 GDVVYIFSDRATASRELTVCASDCHQSNLIGSFGHTSGSWRLFDLVMLADTSSVGCIVRI 569
Query: 358 ESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP----- 412
VL DR E + +IK + DR N V V I P
Sbjct: 570 NRNDICVL---TDRSETRYLSPMQIKAAVASPRQTMDRLNNIVTRGAEVIIQTSPNTPYH 626
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
G+ G VE ++ LF+ R E+AG + + S +++GG
Sbjct: 627 LVGQTGRVEQLFGSTLFVRVRSVKENAGLVVLDARSVLLIGG 668
>gi|403222662|dbj|BAM40793.1| transcription factor [Theileria orientalis strain Shintoku]
Length = 1003
Score = 149 bits (375), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 158/598 (26%), Positives = 258/598 (43%), Gaps = 96/598 (16%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
MQK +G + I S + + Y+YIEAD + V EA RNI + LVP+ EM
Sbjct: 182 MQK---EGKHMGIYSCFVPEGVTGYLYIEADNKQAVTEALAEFRNINLTTLKLVPMNEMA 238
Query: 61 DVLAVESKAIDL-SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL-ANK 118
+V ++ + + +VR+K G Y GDL +V + D VT+KLIPRID + L A K
Sbjct: 239 NVFTSGNENLYFPNVGEYVRVKFGRYAGDLGQVYESDETNNTVTLKLIPRIDPELLGAGK 298
Query: 119 LE--GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDP---------------MTGDYF 161
+E G E + + V +E +RV R+ ++G
Sbjct: 299 MEEGGYEDQNESALLN----QTVGHLKETKLRVNARQKSSQKFPKSFFDREAIELSGGLI 354
Query: 162 EN--------IGGMLFKDG--FLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIA- 210
E+ GM F D L K + + +N+ T EL++F N ++ I
Sbjct: 355 EHGLIPGTFRYQGMSFLDSGHILVKFSAKRLACGENVNATLAELKEF-----NVDTTITE 409
Query: 211 SLSTLFANRKKGHFMK-GDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNS 269
+L + K H K G+ + V+KG+L ++ G + +D+E V ++PE K LP +N
Sbjct: 410 ALEKISKAPNKVHLYKLGENIRVVKGELTSVVGKIVAIDKEEVEVQPEDKELP-NFRINL 468
Query: 270 KELCKYFEPGNHVKVVSGTQAGATGMVLKV--EQHVLIILSDTTKEDIRVFADDVV---- 323
+ K G++V+ + G+ G +G+V+ V + ++ S T ++ + + +
Sbjct: 469 NSVVKNLVEGDNVRAIGGSNEGQSGLVVLVNDKNRTALVFSPQTGQEFKCSLEHLSMIPK 528
Query: 324 ----ESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKL 379
+SS G+ + + DL+ G+I V+ + L + D E V
Sbjct: 529 EGQGDSSHRVGGVN---GFVVSDLIQTTTGHVGIITAVDRNSMLTL--LTDTGEKVAVPA 583
Query: 380 REIKCKLEKKSN-VQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEH 438
+I+CK N +D N + + +V+GP K K G V H++R +F+ LE+
Sbjct: 584 SQIQCKRTSFGNTTKDFNNQAIEPRSRAMVVKGPYKHKGGQVLHVWRNSVFL----TLEN 639
Query: 439 AGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRG 498
ICA S C+ G+ N PQ R R P
Sbjct: 640 GEIICAASQDCLKSSGTIETTKTNN--------------APQG-ARIVRKNP-------- 676
Query: 499 GRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS--MISDN 554
L+G TVK+ G YKG G ++ V+ + L+ + K V +S +I DN
Sbjct: 677 -------LLGKTVKILQGRYKGLLGDIIHVEPTQFTILLKVKPKTVRYPKSDCVIMDN 727
>gi|440301943|gb|ELP94325.1| transcription elongation factor SPT5, putative [Entamoeba invadens
IP1]
Length = 809
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 175/734 (23%), Positives = 306/734 (41%), Gaps = 114/734 (15%)
Query: 6 DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAV 65
+K + + SV K +Y+EA + +AC+G+R+IY + ++ ++L +
Sbjct: 140 NKDRPMHMFSVFVPVEKKGVLYVEALDKPKFVDACEGVRDIYVNTCTQLTDEQIKELL-I 198
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN-------- 117
++ +T+VR+ G+YK D+ VV ++ +++ V+L+PR D+Q
Sbjct: 199 SRVPDNIEVNTYVRVATGDYKNDIGVVVQIEE-NKKIKVRLVPRFDIQKYQTIAKKKLEL 257
Query: 118 ----------------KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYF 161
K+EG+ K+ + P+ + + +A E E + D M G
Sbjct: 258 MKEEDEEGGGVKKRRFKVEGKNNTKQ---MFDPQKLGIADAVE-----EIKNDDMEGVTI 309
Query: 162 ENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKK 221
G + DGF+YK+ + S+ NI PT +EL +F G A F K
Sbjct: 310 YKFNGQTYYDGFVYKSFPVSSLQFNNIVPTDEELIQFNV----GNEMQAKGKLRFG--KT 363
Query: 222 GHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNH 281
+F GD V +I D + + V E + + L + ++ YF G+
Sbjct: 364 RNFKVGDLVTIINSDERVYGKKSKIVQSEGEFVVVVGNEIKDPLRMTFADVQIYFNSGDR 423
Query: 282 VKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELR 341
VKV G G TG++ ++ + +L+D K I V D+ + E+ I ++ Y +
Sbjct: 424 VKVTDGMYKGETGIIDSLKDDEVFVLTDRKKALIVVSMIDIENTKEIGQQINELNGYSVN 483
Query: 342 DLVLLDNNSFGVIIRVESE---------AFQVLKGVPDRPEVALVKLREIKCKLEKKSNV 392
D V L + + G+++ + ++ A Q +K P + + R+ +CK
Sbjct: 484 DFVQLSSGA-GLVLEILADSNRLVILNDANQTIKIEPSLVQGKFPERRDARCK------- 535
Query: 393 QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYR-GILFIHDRHHLEHAGFICAKSSSC-- 449
D +N V++ D V+IV G KG++ + HI++ +F+ LE+ +I A+S
Sbjct: 536 -DCRRNFVSLGDKVKIVGGNYKGREATLIHIFQFSKVFLTCPGVLENNSYIVAQSKEIQG 594
Query: 450 --VVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALV 507
+ DR + + + + P R SRG +
Sbjct: 595 PNTLHNAVVQRQDRRIERHDDRDKFQEP--------RSSRGL------------SFREMK 634
Query: 508 GTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS--DNVVVSTPYRDTP 565
G V + G YK Y+G++V++KG +EL++ + + +++ DN T R
Sbjct: 635 GKKVTISEGIYKNYKGKIVNMKGNQFVIELDANQRNINLEQEQFKVLDNSNNGTFQRS-- 692
Query: 566 RYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTP--MSPPRDNW 623
YG +TP PS M + +TP TP R+ + P TP +P + +
Sbjct: 693 -YGNFQQTPFTPSS-------NMMSNTPSTPA-----TPGRN-VFTPATPAVQTPSQSAF 738
Query: 624 EDGN--PGSWGTSPQYQPGSPPSRAYEAPTPGSGWAS-----TPGGNYSDAGTPRDSSST 676
+ N P +P+Y +P A TPG G S TPG PR +
Sbjct: 739 TNVNQTPRFLAQTPKYTVSTPMQMA-PPMTPGVGRMSDQPPMTPGVGRMTDQPPRTPAQQ 797
Query: 677 YVNAPSPYLPSTPG 690
Y + P TPG
Sbjct: 798 YFKSE---FPQTPG 808
>gi|156087497|ref|XP_001611155.1| KOW motif family protein [Babesia bovis]
gi|154798409|gb|EDO07587.1| KOW motif family protein [Babesia bovis]
Length = 864
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 154/570 (27%), Positives = 259/570 (45%), Gaps = 73/570 (12%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
+G +L I S A D +K++IY+EAD ++ + +A LRN+ K+ +VPI E++ + A+E
Sbjct: 186 QGRKLGIYSCFAPDEIKSFIYVEADTKSAIIDAFSDLRNLNLSKLKMVPINEVSTIYAME 245
Query: 67 SKAIDLSR-DTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREV- 124
S+ + +VR+K G Y GDLA+V + D + V VK+IPR LQ + EG V
Sbjct: 246 SRQQTVPLIGEYVRIKTGRYAGDLAQVHESDELNGTVVVKVIPR--LQEDSKNFEGLNVD 303
Query: 125 ----------------AKKKPFVPPPRFMNVDEARELH-IRVERRRDPMTGDYFENIGGM 167
K K FV R + EA EL +E+ P T Y M
Sbjct: 304 DKGSEFNFNKANMVKKTKSKIFV--KRLFD-REAVELKGGLIEQGFTPGTFRY----NNM 356
Query: 168 LFKD-GFLYKTVSMKSISA-QNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFM 225
F D GFL +S++ I + T EL++F N E + +++ + F
Sbjct: 357 TFLDAGFLLLRISVRRIVVGSAVDATLSELKEF-----NLEDNYGNVANVINTSNLHLFR 411
Query: 226 KGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVV 285
G+ + V +G+L N+ G + + + + I+PE + +P + + KYF+ G++V+++
Sbjct: 412 LGEKIRVTRGELINVIGHIASMHNDEIEIQPEDESIP-NFKIQPSCVMKYFQEGDNVRII 470
Query: 286 SGTQAGATGM--VLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTT--GITKIGDYELR 341
G G +G+ ++ E+ ++ S E +V D +V+ E + + + Y L
Sbjct: 471 DGINRGESGLISIVDFEKKTAVVFSPQKSEQFKVKLDYLVKVKETVSFESLGSLNGYFLG 530
Query: 342 DLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKS-NVQDRNKNTV 400
DL+ G+I+ + F VL + E V + +I CK + +D N T+
Sbjct: 531 DLIQSSKGEVGIIVSISKSCFTVL--LDTNVEAKWV-MSDILCKRSSFGYSSKDVNNATL 587
Query: 401 AVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGD 460
+ V IV GP K KQG V+H+++ F+ LE ++ S VV+ S +
Sbjct: 588 YTHNKVLIVNGPYKNKQGVVKHLWKNKCFV----QLEKNVYLVVDSG--VVLNMSIS--- 638
Query: 461 RNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGH--DALVGTTVKVRLGPY 518
TP Q R P G +R + +G TVK+ +G +
Sbjct: 639 ------------ETPNFAEQ------REAPERGLESRYKNKIRVPNKFIGKTVKILVGRH 680
Query: 519 KGYRGRVVDVKGQSVRVELESQMKVVTVDR 548
KG G V+ V + L+ + VV + +
Sbjct: 681 KGLLGDVISVDQSEFTIILKVKPMVVRIKK 710
>gi|428672200|gb|EKX73114.1| conserved hypothetical protein [Babesia equi]
Length = 898
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 154/607 (25%), Positives = 265/607 (43%), Gaps = 72/607 (11%)
Query: 3 KCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDV 62
K +G + I S D + YIY+EAD +A V EA R I + +VP+ EM +V
Sbjct: 193 KMQSEGRNMGIYSCFVPDGVSGYIYVEADTKAVVLEALAEFRQINLNTIKIVPMNEMLNV 252
Query: 63 LAVESKAIDLSR-DTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID-----LQAL- 115
+ ++ + D +VR+K G Y GDL +V + D + +T+KLIPR+D L++L
Sbjct: 253 FTTGTDSVYIPMVDEYVRVKFGRYGGDLGQVFESDELSSAITIKLIPRLDPEVYNLRSLD 312
Query: 116 --------ANKLEGREVAK----KKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFEN 163
N + +V K +K PP +F + + +E+ P T Y
Sbjct: 313 GDRLDADNINDFDAYKVGKDTKLRKNRKPPRKFFDRESVELNGGFIEQGITPGTYKY--- 369
Query: 164 IGGMLFKDGFLYKTVSMKS-ISAQNIQPTFDELEKFRTPGENGE-SDIASLSTLFANRKK 221
G + G + +++K I+ ++ T EL++F +G S+ + A +K
Sbjct: 370 QGFTFLESGHILIRMNVKRVITGDSVNATLTELKEFNIDKIDGNISETVGMGISRAPKKL 429
Query: 222 GHFMK-GDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGN 280
H+ K G+ V VIKG+L ++ G + +D E V I+P+ +P ++ + K+FE G+
Sbjct: 430 LHYYKLGECVRVIKGELVSIIGKIISIDNEEVEIQPKNDEVP-AFKIHYTSIIKHFEEGD 488
Query: 281 HVKVVSGTQAGATGMVLKVEQ--HVLIILSDTTKEDIRV---FADDVVESSEVTTGITKI 335
+V+ + G G TG++ + + + +I S + ++ + + + + + +
Sbjct: 489 NVRAIGGMNEGETGLISMINEANKIAVIFSPQSGQEFKCGLEYLTCIPKEGASSNALGAF 548
Query: 336 GDYELRDLVLLDNNSFGVIIRVE-SEAFQVLKGVPDRPEVALVKLREIKCKLEKKSN-VQ 393
Y + DLV + G++I ++ S F +L D ++ ++ CK N +
Sbjct: 549 NGYSINDLVQTSTGTVGIVIGIDRSGMFSIL--TEDGTKIKCTA-SQVICKRSSFGNTCK 605
Query: 394 DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVG 453
D N + +K V +V G + K G V H+++ +F+ LE I S SC
Sbjct: 606 DFNHQPIELKSRVMVVRGAYRHKSGQVLHLWKNTVFL----FLESGETISVHSESC---- 657
Query: 454 GSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKV 513
L T P R G +G LVG TVK+
Sbjct: 658 ------------------LATTHSAPIYNNREKIAG------KKGAVFRKSPLVGKTVKI 693
Query: 514 RLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSET 573
G +KG G + +V+ + L+ + KVV R D VVV + T R S +
Sbjct: 694 LQGRHKGLFGDITNVEPTQFTILLKIKAKVV---RYPKGDCVVVDN-WHTTMREQSRSFS 749
Query: 574 PMHPSRT 580
+ PS T
Sbjct: 750 SLKPSIT 756
>gi|407393447|gb|EKF26602.1| transcription initiation protein, putative [Trypanosoma cruzi
marinkellei]
Length = 720
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 139/463 (30%), Positives = 214/463 (46%), Gaps = 43/463 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKA 69
+L I SV LDH+K YIYIEA ++ V+ A GL ++ + LV E+ ++
Sbjct: 231 DLGIISVFCLDHVKEYIYIEAHRKVFVENALNGLDGLFRYNITLVNPSELMQMMEQRPSP 290
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL-ANKLEGREVAKKK 128
L ++VR++ Y+ DLA+VV+V+ +VTVK++PR D NK+E R
Sbjct: 291 EKLRVGSFVRLRQRQYRLDLAQVVEVNPTSNQVTVKVVPREDFVGKPFNKIEIR------ 344
Query: 129 PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF-KDGFLYKTVSMKS-ISAQ 186
PPRF A + R GD++ G + F K+G+L KTVS + IS
Sbjct: 345 ---LPPRFFVPTLAAYVQDR---------GDFYR-WGDLTFDKEGYLLKTVSSRMVISGT 391
Query: 187 NI-QPTFDELEKFRTPGENGESDIASLSTLFAN--RKKGHFMKGDAVIVIKGDLKNLKGW 243
+ +PT +E+ F N + FA+ ++ G+ V V+ G L+ G
Sbjct: 392 KMDKPTVEEIALF---FNNDRERVREAVARFASVGQQGADLRIGNTVRVVSGQLRETVGT 448
Query: 244 VEKV--DEENVHIRPEMKGL--PKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
+E + D V + + G P + V K+F G HV V +G +AG +G V+K
Sbjct: 449 IENIFLDTNTVSLSCPVPGRKEPIKVRVELAACVKHFAVGTHVIVSNGERAGESGTVVKS 508
Query: 300 EQHVLIILSD--TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL-DNNSFGVIIR 356
V+ I SD T ++ V A D +S+ + + G + L DLV+L D +S G I R
Sbjct: 509 SGDVVYIFSDRATASRELAVCASDCHQSNLLGSFGHTSGSWRLFDLVMLADTSSVGCIFR 568
Query: 357 VESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP---- 412
+ VL DR E + +IK + DR N V V I P
Sbjct: 569 INRNDICVL---TDRSETRYLSPMQIKAAVATPRQTTDRLNNIVTRGAEVIIQASPNTPY 625
Query: 413 -CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
G+ G VE ++ LF+ R E+AG + + S +++GG
Sbjct: 626 HLVGQTGRVEQLFGSTLFVRVRSVKENAGLVVLDARSVLLIGG 668
>gi|432105211|gb|ELK31567.1| Transcription elongation factor SPT5 [Myotis davidii]
Length = 276
Score = 146 bits (368), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 147/251 (58%), Gaps = 6/251 (2%)
Query: 180 MKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
M ++ + ++PT ELEKF E + ++ + ST K+ +F GD V V +G+L N
Sbjct: 1 MSAVITEGVKPTLSELEKFEDQPEGIDLEVVTEST--GKEKEHNFQPGDNVEVCEGELIN 58
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
L+G + VD + I P+ + L L ++EL KYF+ G+HVKV +G G TG+++++
Sbjct: 59 LQGKILSVDGNKITIVPKHEDLKDMLEFPAQELRKYFKMGDHVKVTAGRFEGDTGLIVRM 118
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
E++ +I+ SD T +++V D+ SE+ +G+ G ++ +LV LD + GVI+R+E
Sbjct: 119 EENFVILFSDLTMHELKVLPRDLQLCSEMASGVDVGGQHDWGELVQLDPQTVGVIVRLER 178
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQG 418
E FQVL +V V+ + + K + + V D +N + VKD+V++++GP G++G
Sbjct: 179 ETFQVLNMY---GKVVTVRHQAVTRKKDTRFAVALDSEQNNIHVKDIVKVIDGPHSGREG 235
Query: 419 PVEHIYRGILF 429
+ H++R F
Sbjct: 236 EIRHLFRSFAF 246
>gi|25012655|gb|AAN71423.1| RE49559p [Drosophila melanogaster]
gi|220945972|gb|ACL85529.1| Spt5-PB [synthetic construct]
Length = 962
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 146/487 (29%), Positives = 220/487 (45%), Gaps = 64/487 (13%)
Query: 383 KCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFI 442
K K + + D ++N + +DVV+++EGP G+ G ++H+YR + F+H R + E+ G
Sbjct: 502 KRKENRHTVALDADQNQIRRRDVVKVMEGPHAGRSGEIKHLYRSLAFLHCRMYTENGGIF 561
Query: 443 CAKSSSCVVVGGSRANGDRNGDAYSR-FNSLRTPPRI--PQSPGRYSRGGPPAGGRNRGG 499
K+ + GGS+ G F S PRI P P A G G
Sbjct: 562 VCKTRHLQLAGGSKTTVSNAGIVGGLGFMS----PRIQSPMHPSGGRGARGGARGGRGGF 617
Query: 500 RGGHD-ALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVV-- 556
R D ++G T+K+ GPYKG G V D + RVEL + + ++VDR+ I+ V
Sbjct: 618 RVTRDREILGKTIKISGGPYKGAVGIVKDATESTARVELHTSCQTISVDRNHIAIVGVTG 677
Query: 557 ----VSTPYRDTPRY-GMGSETPMHP---SRTPLHPYMTPMRDAGA-------TPIHDGM 601
VST R R G G++TP + S+TPL TP D TP HDG
Sbjct: 678 KEGSVSTYGRTPARTPGYGAQTPSYTAAGSKTPLVGSQTPNWDTDTRTPYGTMTPSHDGS 737
Query: 602 RTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPP---SRAYEAPTPGSGWAS 658
TP R AW+P +P R+N D + SP Y P +P + + TPG+ + S
Sbjct: 738 MTP-RHGAWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPGYQMTSQFAPQTPGTLYGS 796
Query: 659 TPGGNYSDAGTPRDSSST---YVNAPSP--YLPSTPGGQPMTPNSASYLPGTPGGQPMTP 713
+ + S Y+N PSP Y P+TPGG P +P Y P TPG
Sbjct: 797 DRSYSPFNPSPSPAPSPYPVGYMNTPSPSTYSPNTPGGIPQSP----YNPQTPGAS---- 848
Query: 714 GTGGLDAMSPVIGADNEGPWFMPDILVRRSGEESV-----VGVIREVLPDGSCRVVLGSS 768
LD+ + G W DI VR + G+IR V +G C V L
Sbjct: 849 ----LDS--------SMGDWCTTDIEVRIHTHDDTDLVGQTGIIRTV-SNGVCSVFLRQE 895
Query: 769 GNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILD 828
+++ + + V P D+ KI+ G R + G+++ DG + +++ ++K+L
Sbjct: 896 DR--SVSIVSEHLAPVLPCNGDEFKIIYGDDRESVGRVLSKDGDVFVCRINE--EIKLLP 951
Query: 829 MAILAKL 835
+ L K+
Sbjct: 952 INFLCKM 958
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/327 (30%), Positives = 160/327 (48%), Gaps = 31/327 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY--SQKVMLVPIREMTDVLAVESK 68
LQI+S+IA + +K YIY+EA K+ HVK + N+ K +VPI+EMTDVL V +
Sbjct: 247 LQIKSIIAPEGVKGYIYLEAYKQTHVKTCIDNVGNLRMGKWKQEMVPIKEMTDVLKVVKE 306
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL-----EGRE 123
+ L WVR+K G YK D+A+V VD + +V +KL+PRID + L E +
Sbjct: 307 QVGLKVKQWVRLKRGLYKDDIAQVDYVDLAQNQVHLKLLPRIDYTRMRGALRTTATESDD 366
Query: 124 VAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI 183
+KK P + + + R + V GD+ G + GFLYK +M +I
Sbjct: 367 SKRKKKRRPAAKPFDPEAVRAIGGEVHS-----DGDFLLFEGNRYSRKGFLYKNFTMSAI 421
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
+ ++PT ELE+F E E ++ + T+ + H F GD V V GDL+NL+
Sbjct: 422 LSDGVKPTLAELERFEESPE--EVNLEIMGTVKDDPTMAHSFSMGDNVEVCVGDLENLQA 479
Query: 243 WVEKVD-----------EENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAG 291
+ +D +H R E + T+A+++ + + VKV+ G AG
Sbjct: 480 KIVAIDGTMNGKCIECKPTALHKRKENR---HTVALDADQ--NQIRRRDVVKVMEGPHAG 534
Query: 292 ATGMVLKVEQHVLIILSDTTKEDIRVF 318
+G + + + + + E+ +F
Sbjct: 535 RSGEIKHLYRSLAFLHCRMYTENGGIF 561
>gi|242063212|ref|XP_002452895.1| hypothetical protein SORBIDRAFT_04g034550 [Sorghum bicolor]
gi|241932726|gb|EES05871.1| hypothetical protein SORBIDRAFT_04g034550 [Sorghum bicolor]
Length = 119
Score = 145 bits (366), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 74/118 (62%), Positives = 90/118 (76%), Gaps = 2/118 (1%)
Query: 721 MSPVIGADNEGPWFMPDILVR--RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALP 778
MSPVIG + G W +PD+LV R G+E V++EVLPDGSCRV LG G GD +
Sbjct: 1 MSPVIGGEAAGSWLLPDVLVNVSRGGDEVSNAVVKEVLPDGSCRVSLGPLGEGDELIVTA 60
Query: 779 NEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLA 836
NE+E+V P+K +K+KIM GP RGATGKLIG+DG+DGIVKV+ SLDVKI+DMAIL KLA
Sbjct: 61 NELEVVRPKKNEKLKIMNGPLRGATGKLIGLDGSDGIVKVEGSLDVKIVDMAILGKLA 118
>gi|67482217|ref|XP_656458.1| transcription initiation factor SPT5 [Entamoeba histolytica
HM-1:IMSS]
gi|56473661|gb|EAL51076.1| transcription initiation factor SPT5, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449708344|gb|EMD47826.1| transcription initiation factor SPT5, putative [Entamoeba
histolytica KU27]
Length = 774
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 161/645 (24%), Positives = 284/645 (44%), Gaps = 70/645 (10%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K + + SV +YIEA E +AC G+R++Y + + +++ ++L V
Sbjct: 143 KDRTMHLFSVFVPKEKTGIVYIEAMTERKFADACDGVRDLYINTIHALNDKQIEELL-VS 201
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL---QALANKL---- 119
+ +++VR+ YKGDL VV+ ++V VKL+PR ++ Q +A K+
Sbjct: 202 RMPTTIEPNSYVRINAEPYKGDLGVVVETTE-NKKVIVKLVPRFNIAHFQEIAKKMRLKK 260
Query: 120 ----EGREVAKKKPFVP----PPRFMNVDEARELHIRVE----------RRRDPMTGDYF 161
G E + + P PP+ +N+ ++L VE + MT +F
Sbjct: 261 EREANGEEDVEDEEKNPRKRVPPKALNL--TKQLFNPVELGISDVCLPDEDENGMTVYHF 318
Query: 162 ENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKK 221
LF DGF++KT M + +I PT +E +F GE A + K+
Sbjct: 319 ---NKTLFYDGFIFKTYKMSQLVFNDIVPTQEEAVQF----AQGEEMPAKGKLRY--EKE 369
Query: 222 GHFMKGDAVIVIKGD--LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPG 279
++ +GD VI+I D ++ K + +D + + + P TL+ +++ YF G
Sbjct: 370 RNYKEGDLVIIINPDEHVQGKKTKIVHIDGDKIIVMGNELDTPITLS--KEDVSIYFNVG 427
Query: 280 NHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYE 339
+ VKV G A TG++ ++ + + +D K I V D+ + E+ IT + Y
Sbjct: 428 DRVKVTDGMYANETGIIEAIKGDEVFVFTDKKKSSICVSQIDLENTEEINQEITVLNGYY 487
Query: 340 LRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKK--SNVQDRNK 397
+ D V L + G+I+ + + ++L + D + V I+ K +++ + +DRN+
Sbjct: 488 VNDFVQL-SEGVGLILEILPQNNKLL-VLNDSNKTQEVDPSVIQGKFQERRDARCRDRNR 545
Query: 398 NTVAVKDVVRIVEGPCKGKQGPVEHIYRGI-LFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
N V++ D+V IV G G+ + HIY+ +F+ LE+ +I
Sbjct: 546 NYVSLGDLVNIVSGVYSGRVAKILHIYQFTKIFVQCPGVLENNSYIVV------------ 593
Query: 457 ANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLG 516
N D G S +S+ R + + R G V VR G
Sbjct: 594 TNKDIVGPNASHQSSISKAERRNERREDRREDRNGFEDPSSANRISFRDFKGKKVIVREG 653
Query: 517 PYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMH 576
PYKGY+G + ++KG+ +EL + +++ +++ S R P+ +
Sbjct: 654 PYKGYQGTIRNIKGKDFMIELSANQRIIKLEQEAFG--TCDSNTCR--PQVSHMATPGQQ 709
Query: 577 PSRTPLHPYMTPMRDAG---ATPIHDGMRTPMRDRAWNPYTPMSP 618
P R +P TP ++ TP+ + TPM NP TPM+P
Sbjct: 710 PMRVTNYPPSTPAMNSQYTTQTPMPNYHNTPM----LNPATPMTP 750
>gi|238581656|ref|XP_002389680.1| hypothetical protein MPER_11159 [Moniliophthora perniciosa FA553]
gi|215452209|gb|EEB90610.1| hypothetical protein MPER_11159 [Moniliophthora perniciosa FA553]
Length = 367
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 169/316 (53%), Gaps = 22/316 (6%)
Query: 240 LKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
+ G VE++ ++ V I P + + + + ++ + K F+PG+HVKV++G A TG+V+ V
Sbjct: 3 VHGVVEQISQDVVTITPVGLDIEQKVELPARSVRKRFKPGDHVKVMAGKNADETGLVVSV 62
Query: 300 EQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVES 359
+V+ LSD + +++ VF+ D+ E++EV +G +GDYEL DLV LD + GVI + E
Sbjct: 63 ADNVVTFLSDMSMQEVSVFSKDLREAAEVGSGTNIVGDYELHDLVQLDPQTVGVIFKTER 122
Query: 360 EAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKGKQG 418
++F+VL + LV +I + + + D + + + D ++ V+G +G++G
Sbjct: 123 DSFRVLD---QNGQARLVHPHQISMRRDSNRAIATDSEGHELRINDNMKEVDG--EGRKG 177
Query: 419 PVEHIYRGIL-FIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPR 477
V HI++ F+H+R +E+ G ++ S + + + N ++ P
Sbjct: 178 RVLHIHQSFYAFLHNRDVVENGGVFVTRARSLISLA-------------PKGNLIKMAPG 224
Query: 478 IPQSPGRYSRGGPPAG--GRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRV 535
S + P G G GRG D L+G +V V GP+KGY G + D G RV
Sbjct: 225 TDLSKMNPALAAPTGGMVGSRPMGRGPRDRLIGVSVTVIKGPHKGYVGTIKDTNGPIARV 284
Query: 536 ELESQMKVVTVDRSMI 551
EL + K+++++++ +
Sbjct: 285 ELHTGNKIISIEKAKL 300
>gi|403342330|gb|EJY70483.1| Transcription elongation factor SPT5 [Oxytricha trifallax]
Length = 1156
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 150/601 (24%), Positives = 260/601 (43%), Gaps = 93/601 (15%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAV--ESKAI 70
I S+ D + +YIEA +HVK +G+ IY QK+ ++P +EMT +L V E
Sbjct: 469 ILSIFNCDKTQGCLYIEAYNMSHVKSIIQGMTGIYKQKIDMIPYKEMTQLLKVCSEINET 528
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL---QALANKLEGREVA-K 126
L WVR+K G Y GDL V++ R VKLIPRI + + N LE A +
Sbjct: 529 TLQAHQWVRVKNGPYAGDLG-FVEMIEGGDRALVKLIPRIRVTQNELGQNVLELYHKAWQ 587
Query: 127 KKPF------VPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSM 180
KK F P R N + + R +P+ ++F +F++GFLY +
Sbjct: 588 KKEFGGVAGQNVPQRLFNPQNVKNECTK--DRFEPLQKNFF-IWKEQMFRNGFLYYFFKI 644
Query: 181 KSISAQNIQPTFDELEKFRTP----------GENGESDIASLSTLFANRKKGHFMK---G 227
+ ++P E+++F+ + E DI +T+ K + G
Sbjct: 645 NKLIIDKVEPRLAEVKRFQKDQTHTSTMDYLSDQDEWDIMDDATVMKTIKNDGLQQLEVG 704
Query: 228 DAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSG 287
D V VI + K +KG + K+D E + + +P L + E+ KYFE G V+V++G
Sbjct: 705 DRVEVINKNQKGIKGTILKIDNEEFILIKTLDKVPYELKMKQSEVIKYFECGESVRVIAG 764
Query: 288 TQAGATGMVLKVEQHVLIILSD--TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVL 345
T +G +G++ +E ++L D TT E++++ ++ E + K+ DY + ++
Sbjct: 765 THSGESGIITAIEAKHAVVLMDGATTSENLKILLSNLKSKKEDMEHV-KLRDYIQKSVIE 823
Query: 346 LDNN--------------------------------SFGVIIRVESEAFQVLKGVPDRPE 373
+ N S G II+V + LK + +
Sbjct: 824 IKYNAGEMIMYQSTHCSQLSTSSSSCVNASSTVSGPSLGYIIQVNPD---YLKVINSHNQ 880
Query: 374 VALVKLREIKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGP-CKGKQGPVEHIYRGILFI 430
V +VK + K+ + N DRN NT+A + +V+I +G GK V+ + +LF+
Sbjct: 881 VQMVKQASVTKKIFPRRNTFALDRNHNTIASRSIVKIYDGSQLNGKCAEVKGFCKDVLFV 940
Query: 431 HDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGP 490
+ + L I + + VV+ G ++ + + G
Sbjct: 941 YLKGQLVQTNGIYSILTRNVVLAGQ---------------------DFVKNVQQENHKGF 979
Query: 491 PAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSM 550
G ++R + ++ + V + G YKG +GRV+ +VE+ ++ V + R M
Sbjct: 980 ILGQQDRKQKDR--KIIRSYVAITAGEYKGLKGRVLFADELICKVEILAKDLKVQLPRGM 1037
Query: 551 I 551
+
Sbjct: 1038 V 1038
>gi|413949802|gb|AFW82451.1| hypothetical protein ZEAMMB73_133619 [Zea mays]
Length = 1564
Score = 142 bits (359), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 124/226 (54%), Gaps = 34/226 (15%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G+++ I + ALDH++ ++++EA+K V EACKG ++Y+ ++ VP
Sbjct: 177 MQKFVDLRKIGTKVPIITAFALDHIRGFVFVEAEKACDVTEACKGFCSVYTSRITSVPAA 236
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E+ +L+ +K ++SR TW+RMK GNYKGDLA
Sbjct: 237 EVPSLLSSRTKPFEISRGTWIRMKNGNYKGDLA--------------------------- 269
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
+G V+ K VP PR ++ E +E +RD TG+ FE + G++FKDGFLYK
Sbjct: 270 --QGGAVSLKGAAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKK 327
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANRKK 221
V++ S+ IQPT EL KF + N S D+ LS ++ ++K+
Sbjct: 328 VALSSLIYWGIQPTETELLKFSSSPSNRASADDLDWLSGMYGSKKR 373
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 122/233 (52%), Gaps = 15/233 (6%)
Query: 323 VESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREI 382
+++S T + ++ L DLVL FGVI+ VE + F++LKG P+ V + K
Sbjct: 396 LKASTSTENYDENDEFNLHDLVLYGRKDFGVIVAVEKDGFRILKGGPEGSAVKVRKQDIK 455
Query: 383 KCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFI 442
K ++K D K T+++ D V +VEGP +GKQG V+H+Y GILFI++ E+ GF
Sbjct: 456 KGCVDKMFTAVDHQKKTISINDTVNVVEGPFQGKQGVVKHLYLGILFIYNESESENCGFF 515
Query: 443 CAKSSSCVVVGGSRANGDRNGDAYSRFNSLR-TPPRIPQSPGRYSRGGPPAGGRNRGGRG 501
CA+S SC + R G S S T P P+ Y + G R R
Sbjct: 516 CAQSGSCEKI--------RKGLGSSTTESSDFTTPMFPEPA--YEQNGHRD--TERPYRS 563
Query: 502 GHDAL--VGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS 552
+ L +G +++R GP KGY RVV + V V+L+S +K+VTV ++S
Sbjct: 564 TREQLFSIGQMLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLS 616
>gi|242088405|ref|XP_002440035.1| hypothetical protein SORBIDRAFT_09g024890 [Sorghum bicolor]
gi|241945320|gb|EES18465.1| hypothetical protein SORBIDRAFT_09g024890 [Sorghum bicolor]
Length = 1569
Score = 142 bits (358), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 123/226 (54%), Gaps = 34/226 (15%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G+++ I + ALDH++ ++++EA+K V EACKG ++Y ++ VP
Sbjct: 180 MQKFVDLRKIGTKVPIITAFALDHIRGFVFVEAEKACDVTEACKGFCSVYVSRITSVPAA 239
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E+ +L+ +K LSR TWVRMK GNYKGDLA
Sbjct: 240 EVPSLLSSRTKPFVLSRGTWVRMKNGNYKGDLA--------------------------- 272
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
+G V+ K+ VP PR ++ E +E +RD TG+ FE + G++FKDGFLYK
Sbjct: 273 --QGGAVSLKEAAVPAPRLISSQELEFFRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKK 330
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANRKK 221
V++ S+ IQPT EL KF + N S D+ LS ++ ++K+
Sbjct: 331 VALSSLIYWGIQPTETELLKFSSSPTNRASADDLDWLSGMYGSKKR 376
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 112/223 (50%), Gaps = 25/223 (11%)
Query: 338 YELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNK 397
+ L DLVL FGVII VE + F++LKG P+ V + K K ++K D K
Sbjct: 414 FNLHDLVLYGRKDFGVIIAVEKDGFRILKGGPEGSAVTVRKQDIKKVCVDKMFTAVDHQK 473
Query: 398 NTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRA 457
T+++ D V +V+GP +G QG V+H+Y GILFI++ E+ GF CA+S SC +
Sbjct: 474 KTISINDTVNVVDGPFQGNQGVVKHLYLGILFIYNESESENCGFFCAQSGSCEKI----- 528
Query: 458 NGDRNGDAYSRFNSLRTP------PRIPQSPGRYSRGGPPAGGRNRGGRGGHDAL--VGT 509
R G S S P P Q+ R + R R + L VG
Sbjct: 529 ---RKGLGSSTTESSDFPTPMFSEPTYEQNEHRDTE---------RPYRSTREQLFSVGQ 576
Query: 510 TVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS 552
+++R GP KGY RVV + V V+L+S +K VTV ++S
Sbjct: 577 MLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKTVTVQADLLS 619
>gi|261326598|emb|CBH09559.1| transcription initiation protein, putative [Trypanosoma brucei
gambiense DAL972]
Length = 715
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 132/463 (28%), Positives = 216/463 (46%), Gaps = 43/463 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKA 69
+L I SV DH+K YIYIE+ ++A V+ A GL ++ + LV E+ ++
Sbjct: 226 DLGIISVFCFDHVKEYIYIESHRKAFVENAINGLVGLFRSNISLVNPSELMQMMEHRPSE 285
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQA-LANKLEGREVAKKK 128
+ ++VR++ Y+ D+A+V+ VD+ +RVTVK++PR D NK E R ++
Sbjct: 286 DKIRVGSFVRLRRRQYRLDIAQVIAVDSASRRVTVKVVPREDFVGKTCNKPEVR--MPQR 343
Query: 129 PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFK-DGFLYKTVSMKSI--SA 185
FVP L + R + T G ++F +G+L+ +VS+ +
Sbjct: 344 LFVP-----------NLAVGAHNRGEMYTW------GDLIFDGEGYLHLSVSLSQVISGV 386
Query: 186 QNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH--FMKGDAVIVIKGDLKNLKGW 243
+ +PT +EL F + N + AS FA+ +G GD V V+ G L+ G
Sbjct: 387 KMEKPTVEELAAFFSSDLNRVREAAS---HFASNGRGSAGLRIGDMVRVVSGQLRETVGT 443
Query: 244 VEKV--DEENVHI--RPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
+E + D V + R MKG L V K+F G HV + G AG +G V+K
Sbjct: 444 IENIFLDTNTVALSCRVPMKGETIKLRVELPLCVKHFTEGTHVVIDGGVHAGESGTVVKA 503
Query: 300 EQHVLIILSD--TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL-DNNSFGVIIR 356
V+ + SD T ++ V ADD S+ V + G ++L DLV+L D++S ++R
Sbjct: 504 LGDVVHVFSDRATATRELVVRADDCHRSNLVGSFGHTSGSWKLFDLVMLPDSSSVACVVR 563
Query: 357 VESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCK-- 414
+ VL DR E + +IK L + D+ N + V I
Sbjct: 564 LNRNDVCVL---TDRMETRYLSTTQIKPVLTGRRQTTDQLANMITRGSEVIIQNDDSSPY 620
Query: 415 ---GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
G+ G VE ++ LF+ + E++G + +S +++GG
Sbjct: 621 HLDGQTGRVEQVFNTTLFVRVKTVKENSGLVAVDASCVLLIGG 663
>gi|407043793|gb|EKE42154.1| transcription initiation factor SPT5, putative [Entamoeba nuttalli
P19]
Length = 776
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 160/647 (24%), Positives = 285/647 (44%), Gaps = 72/647 (11%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K + + SV +YIEA E +AC G+R++Y + + +++ ++L V
Sbjct: 143 KDRTMHLFSVFVPKEKTGIVYIEAMTERKFADACDGVRDLYINTIHALNDKQIEELL-VS 201
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL---QALANKL---E 120
+ +++VR+ YKGDL VV+ ++V VKL+PR ++ Q +A K+ +
Sbjct: 202 RMPTTIEPNSYVRINAEPYKGDLGVVVETTE-NKKVIVKLVPRFNIAHFQEIAKKMRLKK 260
Query: 121 GREVAKKKPFVP-----------PPRFMNVDEARELHIRVE----------RRRDPMTGD 159
RE ++ PP+ +N+ ++L VE + MT
Sbjct: 261 EREANGEEDVEEDEKEKNPRKRVPPKALNL--TKQLFNPVELGISDVCLPDEDENGMTVY 318
Query: 160 YFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANR 219
+F LF DGF++KT M + +I PT +E +F GE A +
Sbjct: 319 HF---NKTLFYDGFIFKTYKMSQLVFNDIVPTQEEAVQF----AQGEEMPAKGKLRY--E 369
Query: 220 KKGHFMKGDAVIVIKGD--LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFE 277
K+ ++ +GD VI+I D ++ K + +D + + + P TL+ +++ YF
Sbjct: 370 KERNYKEGDLVIIINPDEHVQGKKTKIVHIDGDKIIVMGNELDTPITLS--KEDVSIYFN 427
Query: 278 PGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGD 337
G+ VKV G A TG++ ++ + + +D K I V D+ + E+ IT +
Sbjct: 428 VGDRVKVTDGMYANETGIIEAIKGDEVFVFTDKKKSSICVSQIDLENTEEINQEITVLNG 487
Query: 338 YELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKK--SNVQDR 395
Y + D V L + G+I+ + + ++L + D + V I+ K +++ + +DR
Sbjct: 488 YYVNDFVQL-SEGVGLILEILPQNNKLL-VLNDNNKTQEVDPSVIQGKFQERRDARCRDR 545
Query: 396 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGI-LFIHDRHHLEHAGFICAKSSSCVVVGG 454
N+N V++ D+V IV G G+ + HIY+ +F+ LE+ +I
Sbjct: 546 NRNYVSLGDLVNIVSGVYSGRVAKILHIYQFTKIFVQCPGVLENNSYIVV---------- 595
Query: 455 SRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVR 514
N D G S +S+ R + + R G V VR
Sbjct: 596 --TNKDIVGPNASHQSSISKSERRNERREDRREDRNGFEDPSSANRISFRDFKGKKVIVR 653
Query: 515 LGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETP 574
GPYKGY+G + ++KG+ +EL + +++ +++ S+ R P+ +
Sbjct: 654 EGPYKGYQGTIRNIKGKDFMIELSANQRIIKLEQEAFG--TCDSSTCR--PQVSHMATPG 709
Query: 575 MHPSRTPLHPYMTPMRDAG---ATPIHDGMRTPMRDRAWNPYTPMSP 618
P R +P TP ++ TP+ + TPM NP TPM+P
Sbjct: 710 QQPMRVTNYPPSTPAMNSQYTTQTPMPNYHNTPM----LNPATPMTP 752
>gi|85001582|ref|XP_955504.1| transcription factor [Theileria annulata strain Ankara]
gi|65303650|emb|CAI76028.1| transcription factor, putative [Theileria annulata]
Length = 926
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 161/584 (27%), Positives = 257/584 (44%), Gaps = 81/584 (13%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVES 67
G L I S D + Y+YIEAD + V EA R I + LVPI EM++V
Sbjct: 201 GKNLGIYSCFVPDGVTGYLYIEADNKTTVIEALSEFRQISLNTLKLVPINEMSNVFTTGF 260
Query: 68 KAIDLSR-DTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANK------LE 120
+ + R +VR+K G Y GDL +V + D VT+KLIPRID L+N +
Sbjct: 261 DNVYIPRVGEFVRVKFGRYAGDLGQVYESDENTSTVTLKLIPRIDPSILSNNDNFNDGFD 320
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDP--MTGDYFEN--------IGGMLFK 170
G + V +N + + ++ RD + G E+ GM F
Sbjct: 321 GIDSINSIGTVGTAAPVNGVKKNIKYNKMLFDRDAVELNGGLIEHGIIPGTFRYQGMTFL 380
Query: 171 D-GFLYKTVSMKSISAQN-IQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGD 228
D G + + S K + Q+ + PT EL +F T ++ +++ S T A K + GD
Sbjct: 381 DSGHILQKFSSKRLVTQDAVNPTLAELREFST--DSSLTEVLSHVTRSAGSKSALYKLGD 438
Query: 229 AVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGT 288
V V+KG+L ++ G + V+ E V ++P+ K LP +N + K G++V+ + G+
Sbjct: 439 RVKVVKGELMSVTGKIIGVEAEEVEVQPDDKELPN-FRINLNSVIKDLVEGDNVRAIGGS 497
Query: 289 QAGATGMVLKV--EQHVLIILSDTTKEDIRVFADDVV---------ESSEVTTGITKIGD 337
G TG+V+ V + ++ S T E+ + + + E S+V I
Sbjct: 498 NEGKTGLVVMVNAKNRSALVFSPQTGEEFKSTLEHLALIPREGLGDEGSKV----GGING 553
Query: 338 YELRDLVLLDNNSFGVIIRVE-SEAFQVLKGVPDRPEVALVKLREIKCK-LEKKSNVQDR 395
+ + DLV + GVII VE S + +L +R +V+ +I CK S+ +D
Sbjct: 554 FVVTDLVQTTSGEVGVIISVERSGSVTILTDGNNRLKVS---PGQITCKRTSVGSSSRDF 610
Query: 396 NKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGS 455
N + + V +V G + K G V H++R LF+ + + I S+ C+
Sbjct: 611 NNQPIEPRQRVMVVRGNYRNKTGQVLHLWRNTLFLSVENDV-----IVVSSTDCL----- 660
Query: 456 RANGDRNGDAYSRFNSLRTPPRIPQSP---GRYSRGGPPAGGRNRGGRGGHDALVGTTVK 512
R G+A S T P +P + R P L+G TVK
Sbjct: 661 -----RAGNA----TSTATKPVTTNAPIGNVKLVRKNP---------------LIGKTVK 696
Query: 513 VRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS--MISDN 554
+ G YKG G ++ V+ + L+ + K V +S +I DN
Sbjct: 697 ILQGRYKGLLGDIIHVEPTQFTILLKVKPKTVRYPKSECVILDN 740
>gi|413945949|gb|AFW78598.1| hypothetical protein ZEAMMB73_452233 [Zea mays]
Length = 1499
Score = 141 bits (355), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 124/226 (54%), Gaps = 42/226 (18%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G+++ I + ALDH++ ++++EA+K +V EACKG ++Y+ ++ VP
Sbjct: 113 MQKFVDLRKIGTKVPIITAFALDHIRGFVFVEAEKAGYVTEACKGFCSVYTSRITSVPAT 172
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E+ +L+ +K ++SR TW+RMK GNYKGDLA
Sbjct: 173 EVPSLLSSRTKPFEISRGTWIRMKNGNYKGDLA--------------------------- 205
Query: 118 KLEGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKT 177
+G V+ K+ VP PRF +E +RD TG+ FE + G++FKDGFLYK
Sbjct: 206 --QGGAVSLKEAAVPAPRF--------FRPHIEIKRDRQTGEVFEVLDGLMFKDGFLYKK 255
Query: 178 VSMKSISAQNIQPTFDELEKFRTPGENGES--DIASLSTLFANRKK 221
V++ S+ IQPT EL KF + N S D+ LS ++ ++K+
Sbjct: 256 VALSSLIYWGIQPTETELLKFSSSPSNRASADDLDWLSGMYGSKKR 301
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/288 (32%), Positives = 139/288 (48%), Gaps = 40/288 (13%)
Query: 337 DYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRN 396
++ L DLVL FGVII VE + F++LKG P+ V + K K ++K D +
Sbjct: 338 EFNLHDLVLYGRKDFGVIIAVEKDGFRILKGGPEGSAVTVRKQDIKKGCVDKMFTAVDHH 397
Query: 397 KNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
K T+++ D V +VEGP +GKQG V+H+Y GILFI + E+ GF CA+S SC +
Sbjct: 398 KKTISINDTVNVVEGPFQGKQGLVKHLYLGILFIFNESESENCGFFCAQSGSCEKIRKGL 457
Query: 457 ANGDRNGDAYSRFNSLRTP----PRIPQSPGRYSRGGPPAGGRNRGGRGGHDAL--VGTT 510
G + + + TP P Q+ R + G P R + L +G
Sbjct: 458 ------GSSTTENSDFPTPMFSEPAYEQNEHRNTEG--PY-------RSTREQLFSIGQM 502
Query: 511 VKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS------DNVVVSTPYR-- 562
+++R GP KGY RVV + V V+L+S +K+VTV ++S DN+ + +
Sbjct: 503 LRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQADLLSVPANRGDNLSGAPASKFG 562
Query: 563 --DTPRYGM---------GSETPMHPSRTPLHPYMTPMRDAGATPIHD 599
DTP +G G + S P P+++AGA D
Sbjct: 563 SQDTPFFGSEAGKTSWDRGLPSFGSDSWQPFSSSTLPVQNAGAESEAD 610
>gi|84043778|ref|XP_951679.1| transcription initiation protein [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|33348636|gb|AAQ15961.1| transcription initiation protein, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|62359715|gb|AAX80146.1| transcription initiation protein, putative [Trypanosoma brucei]
Length = 715
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 217/463 (46%), Gaps = 43/463 (9%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKA 69
+L I SV DH+K YIYIE+ ++A V+ A GL ++ + LV E+ ++
Sbjct: 226 DLGIISVFCFDHVKEYIYIESHRKAFVENAINGLVGLFRSNISLVNPSELMQMMEHRPSE 285
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQA-LANKLEGREVAKKK 128
+ ++VR++ Y+ D+A+V+ VD+ +RVTVK++PR D NK E R ++
Sbjct: 286 DKIRVGSFVRLRRRQYRLDIAQVIAVDSASRRVTVKVVPREDFVGKTCNKPEVR--MPQR 343
Query: 129 PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFK-DGFLYKTVSMKSI--SA 185
FVP L + R G+ + G ++F +G+L+ +VS+ +
Sbjct: 344 LFVP-----------NLAVGAHNR-----GEMYA-WGDLIFDGEGYLHLSVSLSQVISGV 386
Query: 186 QNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH--FMKGDAVIVIKGDLKNLKGW 243
+ +PT +EL F + N + AS FA+ +G GD V V+ G L+ G
Sbjct: 387 KMEKPTVEELAAFFSSDLNRVREAAS---HFASNGRGSAGLRIGDMVRVVSGQLRETVGT 443
Query: 244 VEKV--DEENVHI--RPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV 299
+E + D V + R M+G L V K+F G HV + G AG +G V+K
Sbjct: 444 IENIFLDTNTVALSCRVPMRGETIKLRVELPLCVKHFTEGTHVVIDGGVHAGESGTVVKA 503
Query: 300 EQHVLIILSD--TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL-DNNSFGVIIR 356
V+ + SD T ++ V ADD S+ V + G ++L DLV+L D++S ++R
Sbjct: 504 LGDVVHVFSDRATATRELVVRADDCHRSNLVGSFGHTSGSWKLFDLVMLPDSSSVACVVR 563
Query: 357 VESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCK-- 414
+ VL DR E + +IK L + D+ N + V I
Sbjct: 564 LNRNDVCVL---TDRMETRYLSTTQIKPVLTGRRQTTDQLANMITRGSEVIIQNDDSSPY 620
Query: 415 ---GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
G+ G VE ++ LF+ + E++G + +S +++GG
Sbjct: 621 HLDGQTGRVEQVFNTTLFVRVKTVKENSGLVAVDASCVLLIGG 663
>gi|342180065|emb|CCC89541.1| putative transcription initiation protein [Trypanosoma congolense
IL3000]
Length = 720
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 209/461 (45%), Gaps = 39/461 (8%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKA 69
+L I SV LDH+K YIYIE+ +++ V+ A GL ++ + LV E+ +L
Sbjct: 231 DLGIISVFCLDHVKEYIYIESHRKSFVENALNGLDGVFRSNISLVNPSELMQMLEHRPTG 290
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQA-LANKLEGREVAKKK 128
+ ++VR++ Y+ DLA+VV +D +RV VK++PR D + NK E R ++
Sbjct: 291 DKIRIGSFVRLRRNPYRLDLAQVVSIDTTARRVAVKVVPREDFVGKVYNKPELR--MPQR 348
Query: 129 PFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF-KDGFLYKTVSMKSISA-- 185
FVP ++V E +HI G + F +DG+L ++S I A
Sbjct: 349 LFVPSL-ALDVRERGGMHI----------------WGDLTFDRDGYLRLSMSYNVIIAGP 391
Query: 186 QNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVE 245
+ +PT +EL F + G A+ + GD V V+ G L+ G +E
Sbjct: 392 KMEKPTVEELATFFN-NDRGRVRDAAARLDSGGQMVTELHLGDVVRVVSGQLRGTTGVIE 450
Query: 246 KV--DEENVHIRPEMKGL--PKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQ 301
+ D + + G P L V K+F G HV + G AG +G V+K
Sbjct: 451 NIFMDTNTAALSCPVPGRKDPIKLRVELAACVKHFAEGAHVIIDKGEYAGESGTVVKASG 510
Query: 302 HVLIILSD--TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLL-DNNSFGVIIRVE 358
V+ + SD T ++ V A D +S+ V + G ++L DLV+L D++S I+R+
Sbjct: 511 EVVHVFSDRATAVRELVVCASDCRQSNLVGSFSHTCGSWKLFDLVMLSDSSSVACIVRLN 570
Query: 359 SEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCK---- 414
VL DR E ++K L K DR N + V I
Sbjct: 571 RNNVCVL---TDRMETRYASTSQLKAVLSGKRQTTDRFANIITRGCEVVIKNDNTSPYHL 627
Query: 415 -GKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGG 454
G+ G VE ++ LF+ R E++G + + S +++GG
Sbjct: 628 DGQTGRVEQVFNTTLFVRVRSVKENSGLVVFDAPSVLLIGG 668
>gi|207342472|gb|EDZ70229.1| YML010Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 629
Score = 134 bits (336), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 168/325 (51%), Gaps = 27/325 (8%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESK 68
+L+I S+ D+ IYIEA K++ +++ C G+ +IY + +L+P++E+ +L +S
Sbjct: 319 KLKILSIFQRDNYTGRIYIEAPKQSVIEKFCNGVPDIYISQKLLIPVQELPLLLKPNKSD 378
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL--ANKLEGREVAK 126
+ L ++VR+K G YKGDLA V + V +K++PR+D + + ++
Sbjct: 379 DVALEEGSYVRIKRGIYKGDLAMVDQISENNLEVMLKIVPRLDYGKFDEIDPTTQQRKSR 438
Query: 127 KKPFV--PPPRFMN------VDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTV 178
+ F PP+ N +D+A L+ R +R DY DG+LYK++
Sbjct: 439 RPTFAHRAPPQLFNPTMALRLDQAN-LYKRDDRHFTYKNEDYI---------DGYLYKSL 488
Query: 179 SMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLF--ANRKKGHFMKGDAVIVIKGD 236
++ + +NIQPT +EL +F + + G D+ S+S A K F GD + V+ G+
Sbjct: 489 RIQHVETKNIQPTVEELARFGS--KEGAVDLTSVSQSIKKAQAAKVTFQPGDRIEVLNGE 546
Query: 237 LKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV 296
+ KG V + ++ I+ + G L L K FEPG+HV V++G G G+V
Sbjct: 547 QRGSKGIVTRTTKDIATIK--LNGFTTPLEFPISTLRKIFEPGDHVTVINGEHQGDAGLV 604
Query: 297 LKVEQHVLIILSDTTKEDIRVFADD 321
L VEQ + +S T ++ + A++
Sbjct: 605 LMVEQGQVTFMSTQTSREVTITANN 629
>gi|449015811|dbj|BAM79213.1| similar to transcription initiation protein SPT5 [Cyanidioschyzon
merolae strain 10D]
Length = 1733
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 124/241 (51%), Gaps = 44/241 (18%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
+QKC+D+ G L I ++A DHL+ +YIEA +E V++A KGL ++Y K+ LVP++
Sbjct: 580 LQKCVDRANQGQPLAITGIVAPDHLRGCLYIEAPRENDVRDAIKGLHHLYQTKITLVPLK 639
Query: 58 EMTDVLAVE--SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL 115
EM +V++V ++ L WVR++ G Y GDLA+V + +V V+L+PR+DL AL
Sbjct: 640 EMVEVVSVRPTTERQKLIPGQWVRLRRGLYAGDLAQVYQIRE--DQVIVRLVPRLDLTAL 697
Query: 116 ANK---------------------------------LEGREVAKKKPFVPPPR-FMNVDE 141
A K R + V PPR + D+
Sbjct: 698 ARKPRYGAVDAVDRDDMENVDDAATKGAPSRQVGEAAAARRGGSRTSGVRPPRKLFDRDQ 757
Query: 142 -ARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSI--SAQNIQPTFDELEKF 198
AR LH+ V RRD TG++F+ F+ G LYK VS K+I A P+ DELE F
Sbjct: 758 VARILHVNVFARRDSRTGEWFDEFENDQFRYGLLYKRVSRKNIIHGAAMTPPSIDELEPF 817
Query: 199 R 199
+
Sbjct: 818 Q 818
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 121/443 (27%), Positives = 182/443 (41%), Gaps = 116/443 (26%)
Query: 218 NRKKGHFMKGDAVIVIKGDLKNLKGWVEKV-DEENVHIRP-------EMKGLPKTLAVNS 269
NR + F KGD V V +GDL+NL G V+ V + V I+P + P ++ V +
Sbjct: 915 NRHR--FRKGDRVRVRRGDLRNLIGIVDSVLPDARVLIQPTPATGEHDASTTPASVQVLA 972
Query: 270 KELCKYFEPGNHVKVVSGTQAGATGMVLKV-------------------EQHVLIILSDT 310
+L KYF G+HV++ +G AG TG+V+ Q + +L+D
Sbjct: 973 ADLEKYFAIGDHVRISAGKHAGLTGLVVATAYQDQDTDKSTDNADNDNDAQASVTVLADV 1032
Query: 311 TKEDIRVFADDVVESSEVTTGITKI-----GDYELRDLV--------------------- 344
T E +RV A + ESS + T G Y L DLV
Sbjct: 1033 TNEVVRVSAHLLSESSGEQSAATAAKLIAGGLYHLFDLVTLHSEPRHAWLILRSLLGHAS 1092
Query: 345 ---LLDNNSFGVII---------RVESEAFQVLKGVPDRPEVALVKLREIKCKLE----K 388
L+ N + G ++ + E QV+ V E+ V +++I+ + + +
Sbjct: 1093 STDLMANGANGTMLSARGAVALAQAAVERVQVMNEV---GEIKTVSVQDIRGRRDGSTAR 1149
Query: 389 KSNVQ--DRNKNTVAVKDVVRIVEG--PCKGKQGPVEHIYRGILFIHDRHHLEHAGFICA 444
S ++ D + V D VRIV P + ++ V +++ LF+ R HL++AG + A
Sbjct: 1150 TSQLRTLDAAQQPVGAGDAVRIVGARHPHRNREALVMYVFGNRLFLRIREHLDNAGMVVA 1209
Query: 445 KSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGG--------------- 489
S + + A A + SL P P S R S G
Sbjct: 1210 SGSEVQRLTQAPAAEVNASGAGTVSTSL--PFVAPTSGWRPSMGTAFGRGGIGSGGLGNS 1267
Query: 490 --------PPAGGRNRGGR-------------GGHDALVGTTVKVRLGPYKGYRGRVVDV 528
P GG + G + GG D L+ V V GP+KG GRV+D
Sbjct: 1268 TAPLSSSRAPFGGSDSGRKPTPGAVRGGGRGGGGGDPLLHRWVAVTRGPHKGLSGRVLDA 1327
Query: 529 KGQSVRVELESQMKVVTVDRSMI 551
SVR+ELES MK +TV R +
Sbjct: 1328 SDTSVRLELESSMKTITVARDAV 1350
>gi|147857295|emb|CAN81369.1| hypothetical protein VITISV_035253 [Vitis vinifera]
Length = 663
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 62/123 (50%), Positives = 90/123 (73%), Gaps = 3/123 (2%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M K +D G++LQI ++DH+K +IYIEADK+ + EACKGL +IY+ +V VP
Sbjct: 430 MHKYVDLQSLGTKLQIIFAFSVDHVKGFIYIEADKQCDINEACKGLCSIYTSRVAPVPKN 489
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
E+T +L+V SK+I+ S+ TW RMK G YKG+LA++V + + +++ T+KLIPRIDLQA+A
Sbjct: 490 EVTHLLSVRSKSIESSKGTWARMKNGKYKGNLAQIVVMSDAQKKATIKLIPRIDLQAMAE 549
Query: 118 KLE 120
K E
Sbjct: 550 KFE 552
>gi|71026572|ref|XP_762952.1| transcription factor [Theileria parva strain Muguga]
gi|68349904|gb|EAN30669.1| transcription factor, putative [Theileria parva]
Length = 1011
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 151/609 (24%), Positives = 245/609 (40%), Gaps = 95/609 (15%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVES 67
G L I S D + Y+YIEAD + V EA R I + LVPI EM++V +
Sbjct: 269 GKNLGIYSCFVPDGVTGYLYIEADNKTVVTEALSEFRQINLNTLKLVPINEMSNVFTTGA 328
Query: 68 KAIDLSRDTW------------VRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL 115
++ + VR+K G Y GDL +V + D VT+KL+PRID L
Sbjct: 329 LRCEVRSHIYYLNVYVPRVGELVRVKFGRYSGDLGQVYESDENSSTVTLKLVPRIDPTLL 388
Query: 116 -----ANKLEGREVAK--------------KKPFVPPPRFMNVDEARELHIRVERRRDPM 156
N L G + + ++ + + +R M
Sbjct: 389 HTEHDVNSLNGVDSVNVDSVNGVNSVNGVNVNNVSSGSNAVTQNKKKYNKMMFDREMVEM 448
Query: 157 TGDYFEN--------IGGMLFKDG--FLYKTVSMKSISAQNIQPTFDELEKFRTPGENGE 206
G E+ GM F D L K S + ++ ++ PT EL +F T +
Sbjct: 449 NGGLIEHGLIPGTFRYQGMTFVDSGHILLKFSSKRLVTQDSVNPTLAELREFST--DESL 506
Query: 207 SDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLA 266
S++ S T K + GD V VIKG+L ++ G + V+ + V ++P+ LP
Sbjct: 507 SEVLSHVTRSTGAKSSLYKLGDRVKVIKGELTSVTGKITSVEGDEVEVQPDDSELPN-FR 565
Query: 267 VNSKELCKYFEPGNHVKVVSGTQAGATGMVLKV--EQHVLIILSDTTKEDIRVFADDVV- 323
++ L K G++V+ + GT G TG+++ V + ++ S T E+ + + +
Sbjct: 566 ISLNSLIKNLVEGDNVRAIGGTNEGKTGLIVMVNPKNRSALVFSPQTGEEFKSTLEHLSL 625
Query: 324 ---ESSEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESE-AFQVLKGVPDRPEVALVKL 379
E + I + + DLV GVI+ V+ + +L +R +V
Sbjct: 626 IPREGLGDEAKVGGINGFVVTDLVQTTEGDVGVIVSVDRNGSVTLLTEDNNRIKVT---P 682
Query: 380 REIKCK-LEKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEH 438
+I CK S+ +D N + + V +V+G + K G V H++R LF+ LE+
Sbjct: 683 GQITCKRTSVGSSSRDFNNQPIEPRQRVMVVKGSYRNKTGQVLHLWRNTLFV----SLEN 738
Query: 439 AGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRG 498
+ A S C+ G + T P P + R P
Sbjct: 739 DVIVVA-SGDCLRAGAAAT----------------TKPNPPTGTAKLVRKNP-------- 773
Query: 499 GRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVS 558
L+G TVK+ G YKG G ++ V+ + L+ + K V +S + VV
Sbjct: 774 -------LIGKTVKILQGRYKGLLGDIIHVEPTQFTILLKVKPKTVRYPKS----DCVVL 822
Query: 559 TPYRDTPRY 567
+ RY
Sbjct: 823 DNWHQNVRY 831
>gi|358053888|dbj|GAB00021.1| hypothetical protein E5Q_06723 [Mixia osmundae IAM 14324]
Length = 1362
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 139/533 (26%), Positives = 231/533 (43%), Gaps = 68/533 (12%)
Query: 208 DIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVD--EENVHIRPEMKGLPKTL 265
D+ L+ + + + GD V +G L+ +G + + E + E TL
Sbjct: 564 DLQVLAQAYKRGSESGYTIGDTVEAWRGALRGAQGVITALSGLEAQIAFNTEAGATSATL 623
Query: 266 AVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVES 325
+++ +L K F G+HVKV+ G TG+++ +++ ++ ++SD + +++ VF+ D+ E+
Sbjct: 624 SID--DLRKRFRVGDHVKVLRGVSVDETGLIISIDKDLVTLMSDLSLQELIVFSKDIKEA 681
Query: 326 SEVTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKL-REIKC 384
+EV T + ++G+Y+L DLV LD ++ GVI +VE +FQ+L D+ + K REI
Sbjct: 682 AEVGTTVNEVGEYKLHDLVQLDEHTTGVIYQVEPHSFQIL----DQAGNSRRKTSREIAT 737
Query: 385 KLEKKSNVQ-DRNKNTVAVKDVVRIVEGPCKG--KQGPVEHIYRGIL-FIHDRHHLEHAG 440
+ + + D + + +V++ G KQG + H+YR I FI++R G
Sbjct: 738 VRDGRMFIATDADGRQLQRGQLVKVGRNSIDGQSKQGTLLHVYRSIYAFIYNREISTTGG 797
Query: 441 FICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGR 500
A +++ V V D SR N P + P S R
Sbjct: 798 VFVANANTLVPVAPVATKLD-----VSRMN----PQMLNALPKESSV-----------VR 837
Query: 501 GGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTP 560
GG + V +R GP KG G + ++ G +VEL S+ K+ ++ + +S ++V
Sbjct: 838 GGREPARFKRVVIRSGPDKGLEGMIKNINGDMCQVELSSRTKLASIAKEKLS--IIV--- 892
Query: 561 YRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPR 620
RD +T + R P+ + + G RD A P T +
Sbjct: 893 -RD--------QTDLMSKRI-----TKPLLEWEVEQLQRGGSNFSRDTASMPSTNYATQT 938
Query: 621 DNWEDGNPGSWGTSPQYQ-----PGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSS 675
+ G G +P Q G P + A TPG + ST + TP +S
Sbjct: 939 NGGRTGGYGRSAATPGGQFGGQTMGQTPGLSRSAATPGGMFGSTSQTPFGGGKTPGAAS- 997
Query: 676 TYVNAPSPYLPSTPGGQPMTPNSASYLPG-----TPGGQPMTPG---TGGLDA 720
+ PS P G P+ N+ PG TP MTPG TG DA
Sbjct: 998 --LWNPSSKTPFGGGKTPLISNATGRTPGASFAQTPAFGGMTPGGAMTGRTDA 1048
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYS--------------QKVMLVPIRE 58
++S + +K YIYIEA E +E+ +GL Y + + L+ +
Sbjct: 285 VQSAFQRESVKGYIYIEAPSEGDARESVRGLIGAYPNNTPANTAQRRAAVRNIFLIDHED 344
Query: 59 MTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANK 118
+L + + WVR+ G Y GDLA V ++ + V ++++PRIDL +
Sbjct: 345 RQALLTMRKVEEPVQVGAWVRLVKGKYAGDLALVANMVENTENVVLQIVPRIDLNPPTVE 404
Query: 119 L----EGREVAKKKPFV-------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGM 167
+G++ +KKP + P NVD + + + RD YF+N
Sbjct: 405 YVVGPDGKK--RKKPVMAVSASTRPSQALFNVDAVKTAYGKKAVTRDGGI-YYFQND--- 458
Query: 168 LFKDGFLYKTVSMKSISAQNIQPTFDEL 195
+ G LYK +I +++ P E+
Sbjct: 459 EYSGGLLYKEFRQSAIQTKDVNPQLSEI 486
>gi|147800936|emb|CAN71178.1| hypothetical protein VITISV_026389 [Vitis vinifera]
Length = 544
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 61/119 (51%), Positives = 86/119 (72%), Gaps = 3/119 (2%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M K +D G++LQI S ++DH+K +IYIEADK+ + E CKGL +IY+ +V VP
Sbjct: 376 MSKYVDLQSVGTKLQIISAFSVDHVKGFIYIEADKQCDINEPCKGLCSIYTSRVAPVPKN 435
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALA 116
E+T +L+V SK I++S TW RMK G YKGDLA++V V + +++ TVKLIPRIDLQ ++
Sbjct: 436 EVTHLLSVRSKCIEISEGTWARMKNGKYKGDLAQIVVVSDAQKKATVKLIPRIDLQQIS 494
>gi|33316728|gb|AAQ04623.1|AF443184_4 Spt5p [Paracoccidioides brasiliensis]
Length = 568
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 191/349 (54%), Gaps = 26/349 (7%)
Query: 1 MQKCIDK--GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLV 54
M++ D+ GS IR + A + + YIY+EA ++A V +A + + N+Y++ K++L+
Sbjct: 219 MKRIEDRPPGSRRPIRIMSAFERGGTMSGYIYVEARRQADVIDALEDMSNVYTKSKMILI 278
Query: 55 PIREMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID--L 112
++EM D+L V +K+ +L VR+K G Y+GDLA++ DV+ VTV+L+PR+D L
Sbjct: 279 SVKEMPDLLRV-TKSEELVPGGRVRIKRGKYQGDLAQLEDVETNGLDVTVRLVPRLDYGL 337
Query: 113 QALANKLEGREVAKKKPFV------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGG 166
+ G + +K+P V PP R + EA++ H + + G + +G
Sbjct: 338 NEDMSAPNG-DAKRKRPGVNNAIARPPQRPFSETEAKKKHAKYLSATSGLGGKTWNYLGD 396
Query: 167 MLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANR---KKGH 223
+ DGFL K + +K + +N+ P DE+ KF ++G +++ + + + +
Sbjct: 397 N-YVDGFLIKDMKVKHLITKNVNPQLDEVTKFARGADDGTANLDLAALAASLKDTTSEDS 455
Query: 224 FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP---EMKGLPKTLAVNSKELCKYFEPGN 280
++ GD V V +G+ + + G + V I+ E++G + + V K L K F+ G+
Sbjct: 456 YLPGDTVEVFQGEQQGVVGRTVSTRGDIVSIKVTEGELEG--QQIDVPIKGLRKRFKEGD 513
Query: 281 HVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEV 328
HVKV+ G++ GMV++++ + +LSD ++I VF+ D+ E+++
Sbjct: 514 HVKVIGGSRFRDELGMVVRIKDDRVTLLSDMNMQEITVFSKDIREAADA 562
>gi|389584708|dbj|GAB67440.1| trancription factor [Plasmodium cynomolgi strain B]
Length = 1286
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 169/790 (21%), Positives = 304/790 (38%), Gaps = 133/790 (16%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVP----------- 55
K ++ I+ V D+LK YIY+EAD +K G + I ++ +VP
Sbjct: 276 KDNDFNIKGVYVSDNLKGYIYVEADSLYMLKRFLLGFKFINLNEITIVPVIIPKVNEYVR 335
Query: 56 ------IREMTDVLAVESKAI--------DLSRDTWVRMKIGNYKGDL---------AKV 92
+ ++ + V K I + D + K GNY L + +
Sbjct: 336 IKRGVYMNDIGQIFEVHEKGIYAIVRLIPRIQYDKYNHFKKGNYHLSLTTSSMSKGPSSM 395
Query: 93 VDVDNVRQRVTVKLIPRIDLQALANK--------LEGREVAKKKPFVPPPRFMNVDEARE 144
D N + + DL ++ + G EV + + +DEA
Sbjct: 396 FDEHNGKSESYYLGDNKFDLNNHGSRAIIPAGVIMPGGEV--RNAAATNEQLEMLDEA-- 451
Query: 145 LHIRVERRRDPMTGDYF-----ENIGG----------------MLFKDGFLYKTVSMKSI 183
L I+ +++++ F E IGG + ++G+L K +++K +
Sbjct: 452 LQIKRKKKKERPLKKLFDREEIEQIGGVIEHGPYPRTIKYQNNIFEENGYLLKKMNIKYL 511
Query: 184 SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGDAVIVIKGDLKNLKG 242
++N T E+ F N E +S F N+ H F KG+ V ++KG+L NL G
Sbjct: 512 ISENANITLTEIRDFNKNNTNEEDINLHVSKSFINKNSLHLFKKGERVKIMKGELYNLIG 571
Query: 243 WVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV--LKVE 300
+ V + + I P+ L K ++ KYF G++V V++G G +G++ L +
Sbjct: 572 TISNVSDNVLTINPD--NLAKNFKFLPTDVTKYFLEGDNVTVINGIHKGKSGLISLLDYK 629
Query: 301 QHVLIILSDTTKEDIRVFADDVV----ESSEVTTGITKIGDYELRDLVLLDNNSFGVIIR 356
++V +I S + + R D+ +SE GI + + + DL+ L + G++
Sbjct: 630 ENVALIFSPSLNTEFRSSIQDLSACEHSTSEGLGGINSLNGFSIGDLIELSDRQIGILTY 689
Query: 357 VESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV-QDRNKNTVAVKDVVRIVEGPCKG 415
++ + ++ + + + I K V +D N N + KDV+++V G K
Sbjct: 690 IDKN--KHIRVLTSHNKTLHTTIGTITSKRSAVGQVCKDENGNIIQAKDVIQVVRGIHKN 747
Query: 416 KQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRT- 474
K V +I++ +F +E GF+ + +C++ G N + + N RT
Sbjct: 748 KVAVVNYIWKNKVFAKINKKIEDNGFVVLDNENCILTG----NQNEKKRIITHNNLFRTN 803
Query: 475 PPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVR 534
+P+ Y + +G TVK+ G YKG G V+D +
Sbjct: 804 SSMLPRRNNTYQ------------------SFIGKTVKILSGVYKGLLGDVIDAERDEFT 845
Query: 535 VELESQMKVVTVDRS--MISD------NVVVSTPYRDTPRYGMGS-------ETPM---- 575
+ L+ + K + RS I+D NV Y + G+G +TP
Sbjct: 846 LLLKIKPKTIRQKRSECAIADSFREHYNVTDDRYYNERESNGLGGALGGERLDTPSARWR 905
Query: 576 -HPSRTPLHP---YMTPMRDAGATPIHDGMRTPM--RDRAWNPYTPMSPPRDNWEDGNPG 629
R+P H Y + + D R R + + + W +
Sbjct: 906 NRSDRSPRHDRIGYESSLYSESVRKGADWRRNEFGGRHDGYRGAYSGNYDEERWRGSHRP 965
Query: 630 SWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTP 689
G +P + P + + A + + W N S+ +SS + P P+ +
Sbjct: 966 PEGDAPGHDPVARAANGANASSHAAPW------NQSNGWKGTNSSHQHSPPPLPHSRNES 1019
Query: 690 GGQPMTPNSA 699
GG N A
Sbjct: 1020 GGGFRVENDA 1029
>gi|401424645|ref|XP_003876808.1| transcription elongation regulator-like protein [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322493051|emb|CBZ28336.1| transcription elongation regulator-like protein [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 702
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 124/466 (26%), Positives = 212/466 (45%), Gaps = 40/466 (8%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K +L I SV ALDH+K YIY+EA ++ V+ GL ++ + +V +E+ +
Sbjct: 209 KKVDLGIISVFALDHVKEYIYVEASRKRFVENVLNGLDGVFRFNIAVVDPKELLQTMETR 268
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-QALANKLEGREVA 125
+ +VR++ Y+GDLA+V +D +T K++PR D Q NK R
Sbjct: 269 PSTQKVRVGDYVRLRQRFYRGDLAQVTGLDPDGVHITCKVVPREDFVQKPFNKATKR--- 325
Query: 126 KKKPFVPPPRFMNVDEARELHIRVERRRDPMTGD-YFENIGGMLFKDGFLYKTVSMKSI- 183
PRF +A + +R ER + GD +F+ ++G+L KTVS + +
Sbjct: 326 ------LEPRFFTPRQA--VGVR-ERENSYIWGDLHFD-------REGYLLKTVSTRMVI 369
Query: 184 -SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKG 242
AQ QP+ +EL +F + E +L A + H GD+V V G L+N G
Sbjct: 370 SGAQLEQPSTEELARFY--NDQREKVERALKAAEAAAQVPHISIGDSVRVTTGQLRNTIG 427
Query: 243 WVEKV----DEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
VE V + + + P + V K+F G HV V G AG +G V+K
Sbjct: 428 VVENVFTNTNTAVLTCTAPGRVQPIKVQVELSACTKHFSEGAHVVVERGEHAGESGTVVK 487
Query: 299 VEQHVLIILSDTTK--EDIRVFADDVVESSEVTTGITKIGDYELRDLV-LLDNNSFGVII 355
++++ D +++V A+D +S + + G +++ DLV + + N G I+
Sbjct: 488 SWGSIVLLFPDRAAAGAELKVEANDCHQSKLGSVSVHSKGVWQVFDLVSITEPNCVGCIV 547
Query: 356 RVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP--- 412
R+ VL + +V + ++ D +NT++ V I + P
Sbjct: 548 RLNRNDVDVL---TENNDVRTLSYAQVNALGRDTRQTTDCRENTLSRGAEVHIQKHPWTP 604
Query: 413 --CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+G+ G +EHI+ +F+ R HA + K+ +++GG +
Sbjct: 605 IGLEGQTGRIEHIFHRTIFVRCRASPLHANIVALKAECVLLIGGRK 650
>gi|90076348|dbj|BAE87854.1| unnamed protein product [Macaca fascicularis]
Length = 497
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 119/193 (61%), Gaps = 13/193 (6%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 210 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 267
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGRE-VA 125
+ +L +WVR+K G YK D+A+V V+ + +++K+IPRID + ++ ++ A
Sbjct: 268 KEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFA 327
Query: 126 KKKPFV-PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSIS 184
K+K F PP R + ++ R L V GD+ G + GFL+K+ +M ++
Sbjct: 328 KRKKFKRPPQRLFDAEKIRFLGGDV-----ASDGDFLIFEGNRYSRKGFLFKSFAMSAVI 382
Query: 185 AQNIQPTFDELEK 197
+ ++PT ELEK
Sbjct: 383 TEGVKPTLSELEK 395
>gi|15236477|ref|NP_192576.1| KOW domain-containing protein [Arabidopsis thaliana]
gi|5731757|emb|CAB52558.1| putative protein [Arabidopsis thaliana]
gi|7267477|emb|CAB77961.1| putative protein [Arabidopsis thaliana]
gi|21689639|gb|AAM67441.1| unknown protein [Arabidopsis thaliana]
gi|332657231|gb|AEE82631.1| KOW domain-containing protein [Arabidopsis thaliana]
Length = 141
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 77/105 (73%), Gaps = 3/105 (2%)
Query: 734 FMPDILVRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIK 793
FMPDILV E VGVIR+V DG C+V LGS G GDTI +E+EIV PRK+D +K
Sbjct: 40 FMPDILVTVHNSE--VGVIRDV-SDGMCKVSLGSGGEGDTIMVPSSELEIVRPRKSDHVK 96
Query: 794 IMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQP 838
I+GG + G T KLIG+DG D IVK+D +LDVKILD+A+LAK QP
Sbjct: 97 ILGGSYLGLTCKLIGIDGLDAIVKIDGNLDVKILDLALLAKFVQP 141
>gi|389593571|ref|XP_003722039.1| transcription elongation regulator-like protein [Leishmania major
strain Friedlin]
gi|321438541|emb|CBZ12300.1| transcription elongation regulator-like protein [Leishmania major
strain Friedlin]
Length = 700
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 123/466 (26%), Positives = 209/466 (44%), Gaps = 40/466 (8%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K +L I SV ALDH+K YIY+EA ++ V+ GL ++ + +V +E+ +
Sbjct: 207 KKVDLGIISVFALDHVKEYIYVEASRKRFVENVLNGLDGVFRFNIAVVDPKELLQTMETR 266
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-QALANKLEGREVA 125
+ +VR++ Y+GDLA+V + +T K++PR D Q NK R
Sbjct: 267 PSTQKVRVGDYVRLRQRFYRGDLAQVTALHPDGVHITCKVVPREDFVQKPFNKATKR--- 323
Query: 126 KKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF-KDGFLYKTVSMKSI- 183
PRF +A + +R M Y G + F ++G+L KTVS + +
Sbjct: 324 ------LEPRFFTPRQA--VGVR------EMENSYI--WGDLHFDREGYLLKTVSTRMVI 367
Query: 184 -SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKG 242
AQ QP+ +EL +F + E +L A + H GD+V V G L+N G
Sbjct: 368 SGAQLEQPSTEELARFY--NDQREKVERALKAAEAAAQVPHISIGDSVRVTTGQLRNTIG 425
Query: 243 WVEKV--DEENVHIRPEMKG--LPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
VE V + + + G P + V K+F G HV V G AG +G V+K
Sbjct: 426 VVENVFTNTNTAVLTCTVPGRVQPIKVQVELSACTKHFSEGAHVVVERGEHAGESGTVVK 485
Query: 299 VEQHVLIILSDTTK--EDIRVFADDVVESSEVTTGITKIGDYELRDLV-LLDNNSFGVII 355
++++ D +++V A+D +S + + G +++ DLV + + N G I+
Sbjct: 486 SWGSIVLLFPDRAAVGAELKVEANDCHQSKLGSVSVHSKGVWQVFDLVSITEPNCVGCIV 545
Query: 356 RVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP--- 412
R+ VL + +V + ++ D +NT++ V I + P
Sbjct: 546 RLNRNDVDVL---TENNDVRTLSYAQVNAVGRDTRQTTDCRENTLSRGAEVHIQKHPWTP 602
Query: 413 --CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+G+ G +EHI+ +F+ R HA + K+ +++GG +
Sbjct: 603 IGLEGQTGRIEHIFHRTIFVRCRASPLHANIVALKAECVLLIGGRK 648
>gi|156100867|ref|XP_001616127.1| trancription factor [Plasmodium vivax Sal-1]
gi|148805001|gb|EDL46400.1| trancription factor, putative [Plasmodium vivax]
Length = 1213
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 185/427 (43%), Gaps = 40/427 (9%)
Query: 155 PMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLST 214
P T Y NI ++G+L K +++K + ++N T E+ F N E +S
Sbjct: 475 PRTIKYQNNI---FEENGYLLKKMNIKYLISENANITLTEIRDFNKNNTNEEDINLHVSK 531
Query: 215 LFANRKKGH-FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELC 273
F N+ H F KG+ V ++KG+L NL G + V E + I P+ L K ++
Sbjct: 532 SFINKNSLHLFKKGERVKIMKGELYNLIGTITNVSENVLTINPD--NLAKNFKFLPSDVT 589
Query: 274 KYFEPGNHVKVVSGTQAGATGMV--LKVEQHVLIILSDTTKEDIRVFADDVV----ESSE 327
KYF G++V V++G G +G++ L +++V +I S + + R D+ SSE
Sbjct: 590 KYFLEGDNVTVINGIHKGKSGLISLLDYKENVALIFSPSLNTEFRSSIQDLSACEHSSSE 649
Query: 328 VTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE 387
GI + + + DL+ L + G++ ++ + ++ + + + I K
Sbjct: 650 GLGGINSLNGFSIGDLIELTDRQIGILTYIDRN--KHIRVLTSNNKTLHTTIGTITSKRS 707
Query: 388 KKSNV-QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKS 446
V +D N N + KDV+++V G K K V +I++ +F +E GF+ +
Sbjct: 708 AIGQVCKDENGNIIQAKDVIQVVRGIHKNKVAVVNYIWKNKVFAKINKKIEDNGFVVLDN 767
Query: 447 SSCVVVGGSRANGD-RNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDA 505
+C++ G + R NS P R+ + +
Sbjct: 768 ENCILTGNQNEKKKIVTHNNLFRVNSSMLPRRVNT----------------------YQS 805
Query: 506 LVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS--MISDNVVVSTPYRD 563
+G TVK+ G YKG G V+D + + L+ + K + R+ I+D+ + D
Sbjct: 806 FIGKTVKILSGVYKGLLGDVIDAERDEFTLLLKIKPKTIRQKRTECAIADSFRENYNLTD 865
Query: 564 TPRYGMG 570
Y G
Sbjct: 866 DRYYNEG 872
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAV- 65
K ++ I+ V D+LK YIY+EAD +K G + I ++ +VP++E+T + ++
Sbjct: 254 KDNDFNIKGVYVSDNLKGYIYVEADSLYMLKRFLLGFKFINLNEITIVPVQELTSIFSMC 313
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID 111
SK I + +VR+K G Y D+ ++ +V V+LIPRI+
Sbjct: 314 HSKVIIPKVNEYVRIKRGVYMNDIGQIFEVHEKGIYAIVRLIPRIE 359
>gi|154340088|ref|XP_001566001.1| transcription elongation regulator-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134063319|emb|CAM45525.1| transcription elongation regulator-like protein [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 693
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 121/466 (25%), Positives = 207/466 (44%), Gaps = 40/466 (8%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K +L I SV ALDH+K YIY+EA ++ V+ GL ++ + +V +E+ +
Sbjct: 200 KKVDLGIISVFALDHVKEYIYVEASRKRFVENVLNGLDGVFRFNIAVVDPKELLQTMETR 259
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-QALANKLEGREVA 125
+ +VR++ Y+GDLA+V + +T K++PR D Q NK R
Sbjct: 260 PSTQKVRVGDYVRLRQRFYRGDLAQVTALHPDGVHITCKVVPREDFVQKPFNKATKR--- 316
Query: 126 KKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLF-KDGFLYKTVSMKSI- 183
PRF +A ++ M Y G + F ++G+L KTVS + +
Sbjct: 317 ------LEPRFFTPRQAVDVR--------EMENSYV--WGDLHFDREGYLLKTVSTRMVV 360
Query: 184 -SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKG 242
AQ QP+ +EL +F + E +L A + GD+V V G L+N G
Sbjct: 361 SGAQLEQPSIEELARF--YNDQREKVERALRAAEAAAQVPPISIGDSVRVTTGQLRNTIG 418
Query: 243 WVEKV--DEENVHIRPEMKG--LPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLK 298
VE V + + + G P + V K+F G HV V G AG +G V+K
Sbjct: 419 VVENVFTNTNTAVLTCTVPGRVQPIKVQVELSACTKHFSEGAHVVVERGEHAGESGTVVK 478
Query: 299 VEQHVLIILSDTTK--EDIRVFADDVVESSEVTTGITKIGDYELRDLV-LLDNNSFGVII 355
++++ D +++V A+D +S + + G +++ DLV + + N G I+
Sbjct: 479 SWGSIVLLFPDRAAVGAELKVEANDCHQSKLGSVSVHSKGVWQVFDLVSITEPNCVGCIV 538
Query: 356 RVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP--- 412
R+ VL + +V + ++ D +NT++ V I + P
Sbjct: 539 RLNRSDVDVL---TENNDVRTLSYAQVNAVGRDTRQTTDCRENTLSRGAEVHIQKHPWTP 595
Query: 413 --CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+G+ G +EHI+ +F+ R HA + K+ +++GG +
Sbjct: 596 IGLEGQTGRIEHIFHRTIFVRCRASPLHANIVALKAECVLLIGGRK 641
>gi|146091153|ref|XP_001466459.1| transcription elongation regulator-like protein [Leishmania
infantum JPCM5]
gi|134070821|emb|CAM69179.1| transcription elongation regulator-like protein [Leishmania
infantum JPCM5]
Length = 700
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 124/469 (26%), Positives = 208/469 (44%), Gaps = 46/469 (9%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K +L I SV ALDH+K YIY+EA ++ V+ GL ++ + +V +E+ +
Sbjct: 207 KKVDLGIISVFALDHVKEYIYVEASRKRFVENVLNGLDGVFRFNIAVVDPKELLQTMETR 266
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-QALANKLEGREVA 125
+ +VR++ Y+GDLA+V + +T K++PR D Q NK R
Sbjct: 267 PSTQKVRVGDYVRLRQRFYRGDLAQVTALHPDGVHITCKVVPREDFVQKPFNKATKR--- 323
Query: 126 KKKPFVPPPRFMNVDE---ARELHIRVERRRDPMTGDYFENIGGMLF-KDGFLYKTVSMK 181
PRF + ARE M Y G + F ++G+L KTVS +
Sbjct: 324 ------LEPRFFTPRQAVGARE-----------MENSYV--WGDLHFDREGYLLKTVSTR 364
Query: 182 SI--SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
+ AQ QP+ +EL +F + E +L A + + GD+V V G L+N
Sbjct: 365 MVVSGAQMEQPSTEELARFY--NDQREKVERALKAAEAAAQVPNISIGDSVRVTTGQLRN 422
Query: 240 LKGWVEKV--DEENVHIRPEMKG--LPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
G VE V + + M G P + V K+F G HV V G AG +G
Sbjct: 423 TIGVVENVFTNTNTAVLTCTMPGRVQPIKVQVELSACTKHFSEGAHVVVERGEHAGESGT 482
Query: 296 VLKVEQHVLIILSD--TTKEDIRVFADDVVESSEVTTGITKIGDYELRDLV-LLDNNSFG 352
V+K ++++ D T +++V A+D +S + + G +++ DLV + + N G
Sbjct: 483 VVKSWGSIVLLFPDRATVGAELKVEANDCHQSKLGSVSVHSKGVWQVFDLVSITEPNCVG 542
Query: 353 VIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP 412
I+R+ VL + +V + ++ D +NT++ V I + P
Sbjct: 543 CIVRLNRNDVDVL---TENNDVRTLSYAQVNAVGRDTRQTTDCLENTLSRGAEVHIQKHP 599
Query: 413 -----CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+G+ G +EHI+ +F+ HA + K+ +++GG +
Sbjct: 600 WTPIGLEGQTGRIEHIFHRTIFVRCHASPLHANIVALKAECVLLIGGRK 648
>gi|308477179|ref|XP_003100804.1| hypothetical protein CRE_15485 [Caenorhabditis remanei]
gi|308264616|gb|EFP08569.1| hypothetical protein CRE_15485 [Caenorhabditis remanei]
Length = 698
Score = 116 bits (291), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 177/717 (24%), Positives = 278/717 (38%), Gaps = 218/717 (30%)
Query: 313 EDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNN-SFGVIIRVESEAFQVLK--GVP 369
E+++V D+ ++VTTG+ +G ++ DLV LD+ + GVIIR+E E +VL GV
Sbjct: 2 EELQVRVRDLQLCADVTTGVDSLGQFQFHDLVQLDHTGNVGVIIRLEKENLEVLNMHGV- 60
Query: 370 DRPEVALVKLREIKCKLE-KKSNVQDRNKNTVAVKDVVRIVEG-PCKGKQ------GPVE 421
V+ +K + I K + + + V D N++ KD+V+++ G K ++ G V
Sbjct: 61 ----VSRIKPQAIIAKKDVRFAKVLDSQNNSIEAKDLVKVISGLNIKERESDEDPVGEVL 116
Query: 422 HIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQS 481
+ +RG +FI+ R ++ G + + ++ G +AN N SR S P P+
Sbjct: 117 YAFRGTVFIYARKIAKNGGVMVCRPKQLLLQGAKKAN---NAPMISRMASP-NPMASPRH 172
Query: 482 PGRYSRGGPPAGGRNRGGRGGHD---------------------ALVGTTVKVRLGPYKG 520
G +RG GG ++G V++ GP KG
Sbjct: 173 SSSGMTSSSHDGMSSRGSTGGQTPRQNQPRHFGTANQQKVRRDLTIIGKNVRITKGPMKG 232
Query: 521 YRGRVVDVKGQSVRVELESQMKVVTVDRS---MISDNVVVS------------TPYRD-- 563
+ G V D +VRVEL +Q + V+VDR+ ++ D + S TP RD
Sbjct: 233 HFGIVRDATEDTVRVELHAQCRTVSVDRARMMVVGDTGITSSGSGTSFYNTAKTPMRDSS 292
Query: 564 -------------------------------------------TPRYGMGSETPMHPSRT 580
TP YG GS TP + S+T
Sbjct: 293 KTPMYGSKTPMYGAQTPMYGAMTPHAGDRTPHYGAMTPAYGGRTPAYGDGSRTPAYGSKT 352
Query: 581 PLHPYM-------TPM--RDAGATPI--HDGMRTPMRDRAWNPYTPM---------SPPR 620
P + + TP D G TP H RTP + N TP +P
Sbjct: 353 PAYGDLDEHSSARTPAYGNDNGRTPAYGHGSGRTPAYGNSENGRTPAYGGSTDSGRTPAY 412
Query: 621 DNWEDGNPGSWG-----------------------TSPQYQPGSPPSRAYE---APTPGS 654
D+ PG TSP Y P P+ Y A TP
Sbjct: 413 DHDSGRTPGYESLPSRTPNYDSSKTPSYTNDFDTPTSPTYDP--EPNEPYNNAPARTPAF 470
Query: 655 GWASTPGGNYSDAGTPR--------------DSSSTYVNAPSPYLPSTPGG--QPMTPNS 698
TPG D+G+P SS TY + P Y TPG P TP
Sbjct: 471 DSGRTPGYETYDSGSPTYDPEPTGETEDIGDTSSPTYDSPPHSYSVPTPGAMINPATP-- 528
Query: 699 ASYLPGTPGG--QPMTPGTGGLD----AMSPVIG----ADN-----------------EG 731
+Y TPG PMTPG+GG A SP +G A+N +G
Sbjct: 529 GAYHVDTPGPFVAPMTPGSGGAYDQYVAPSPYMGGGFEANNFNNAGGAIESIPEHFLVQG 588
Query: 732 PWFMPDILV-------RRSGEESVV-----GVIREVLPDGSCRVVLGSSGNGDTITALPN 779
W M ++ V R + E++V G + +PD C + + +
Sbjct: 589 HWIMSNLYVVIKEHDPRYNDREAIVQNVNDGKVDIYIPDLKCNLEVDF-----------D 637
Query: 780 EIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSL-DVKILDMAILAKL 835
++ P+ D +++ G G +G+++ +DG D +++ + D++ ++ + K+
Sbjct: 638 QLSPTRPQPGDFARVIFGHDGGHSGQVVSMDGVDALIRSQSDISDMRSCNIGLCCKM 694
>gi|86170855|ref|XP_966098.1| trancription factor, putative [Plasmodium falciparum 3D7]
gi|46361063|emb|CAG25350.1| trancription factor, putative [Plasmodium falciparum 3D7]
Length = 1280
Score = 116 bits (290), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 116/508 (22%), Positives = 216/508 (42%), Gaps = 49/508 (9%)
Query: 120 EGREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVS 179
E ++ KKK P + + DE + +E P T Y NI ++G++ K ++
Sbjct: 515 EALQLRKKKKERPLQKLFDRDEIERIGGVIETGPYPRTIKYQNNI---FEENGYILKKMN 571
Query: 180 MKSISAQNIQPTFDELEKF-RTPGENGESDIASLSTLFANRKKGHFMKGDA-VIVIKGDL 237
+K + +N T E+ +F + G GE ++ F N+ H K D V ++KG+L
Sbjct: 572 IKYLITENANITLTEIREFNKNNGMAGEKATLGITKSFINKNSLHLFKKDERVKILKGEL 631
Query: 238 KNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMV- 296
NL G + V++ + I P+ L K ++ KYF G++V V++G G +G++
Sbjct: 632 CNLIGTITAVNDNVLTINPD--NLAKQFKFLPSDVTKYFIEGDNVTVINGLHKGKSGLIS 689
Query: 297 -LKVEQHVLIILSDTTKEDIRVFADDV---VESSEVTTGITKIGDYELRDLVLLDNNSFG 352
+ +++V +I S + ++R D+ + +SE G+ + + + DL+ L++ G
Sbjct: 690 LIDYKENVALIFSPSLNTELRCSIQDLSLSINNSEGLGGVHTLNGFSVGDLIELNDRQIG 749
Query: 353 VIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV----QDRNKNTVAVKDVVRI 408
V+ ++ K + I C K+S V +D N N V +D ++I
Sbjct: 750 VLTYIDKN-----KHIRVLTNNNTTLHTTIGCITSKRSAVGQVGRDENNNIVQSRDNIQI 804
Query: 409 VEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR 468
V G + K + +I++ +F +E GF+ + +C +VG +
Sbjct: 805 VRGAHRNKVAVIMYIWKNKIFGKINKKIEDNGFVVLECQNCSLVGNP-----------AE 853
Query: 469 FNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDV 528
+ T + +S Y R ++ +G TVK+ G YKG V+D
Sbjct: 854 KKKIITNNNLFRSNTNYLRKN-----------NNFNSFIGKTVKILTGVYKGLLADVIDA 902
Query: 529 KGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPY-MT 587
+ + L ++K TV + I +S Y+D E + ++ L P M
Sbjct: 903 ERDEFTLLL--KIKPKTVRQKRIE--CAISDSYKDQNACEENDEMDI-ENKNKLKPLQMF 957
Query: 588 PMRDAGATPIHDGMRTPMRDRAWNPYTP 615
+ D HD P ++++ P
Sbjct: 958 QLSDQKKNKFHDSFYNPREKKSFDKLPP 985
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 8/133 (6%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K ++ I+ + D+LK YIYIEAD +K+ G + I ++ +VPI+E+T + +
Sbjct: 284 KDNDFNIKGIYVSDNLKGYIYIEADSLYMLKKFLLGFKFINLNEISIVPIQELTSIFTMC 343
Query: 67 SKAIDLSR-DTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVA 125
I++ + + +VR+K G Y D+ ++ ++ V+LIPRI + N A
Sbjct: 344 HSKINIPKVNEYVRIKRGLYINDIGQIYEIHEKGIYAIVRLIPRITYEHFMN-------A 396
Query: 126 KKKPFVPPPRFMN 138
KK + +N
Sbjct: 397 KKSKYYNQKSSLN 409
>gi|398017772|ref|XP_003862073.1| transcription elongation regulator-like protein [Leishmania
donovani]
gi|322500301|emb|CBZ35379.1| transcription elongation regulator-like protein [Leishmania
donovani]
Length = 700
Score = 115 bits (289), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 123/469 (26%), Positives = 207/469 (44%), Gaps = 46/469 (9%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K +L I SV ALDH+K YIY+EA ++ V+ GL ++ + +V +E+ +
Sbjct: 207 KKVDLGIISVFALDHVKEYIYVEASRKRFVENVLNGLDGVFRFNIAVVDPKELLQTMETR 266
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDL-QALANKLEGREVA 125
+ +VR++ Y+GDLA+V + +T K++PR D Q NK R
Sbjct: 267 PSTQKVRVGDYVRLRQRFYRGDLAQVTALHPDGVHITCKVVPREDFVQKPFNKATKR--- 323
Query: 126 KKKPFVPPPRFMNVDE---ARELHIRVERRRDPMTGDYFENIGGMLF-KDGFLYKTVSMK 181
PRF + ARE M Y G + F ++G+L KTVS +
Sbjct: 324 ------LEPRFFTPRQAVGARE-----------MENSYV--WGDLHFDREGYLLKTVSTR 364
Query: 182 SI--SAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKN 239
+ AQ QP+ +EL +F + E +L A + + GD+V V G L+N
Sbjct: 365 MVVSGAQMEQPSTEELARFY--NDQREKVERALKAAEAAAQVPNISIGDSVRVTTGQLRN 422
Query: 240 LKGWVEKV--DEENVHIRPEMKG--LPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGM 295
G VE V + + M G P + V K+F G HV V G AG +G
Sbjct: 423 TIGVVENVFTNTNTAVLTCTMPGRVQPIKVQVELSACTKHFSEGAHVVVERGEHAGESGT 482
Query: 296 VLKVEQHVLIILSDTTK--EDIRVFADDVVESSEVTTGITKIGDYELRDLV-LLDNNSFG 352
V+K ++++ D +++V A+D +S + + G +++ DLV + + N G
Sbjct: 483 VVKSWGSIVLLFPDRAAVGAELKVEANDCHQSKLGSVSVHSKGVWQVFDLVSITEPNCVG 542
Query: 353 VIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGP 412
I+R+ VL + +V + ++ D +NT++ V I + P
Sbjct: 543 CIVRLNRNDVDVL---TENNDVRTLSYAQVNAVGRDTRQTTDCLENTLSRGAEVHIQKHP 599
Query: 413 -----CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSR 456
+G+ G +EHI+ +F+ HA + K+ +++GG +
Sbjct: 600 WTPIGLEGQTGRIEHIFHRTIFVRCHASPLHANIVALKAECVLLIGGRK 648
>gi|221058114|ref|XP_002261565.1| transcription factor [Plasmodium knowlesi strain H]
gi|194247570|emb|CAQ40970.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 1249
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 175/399 (43%), Gaps = 38/399 (9%)
Query: 155 PMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLST 214
P T Y NI ++G+L K +++K + ++N T E+ F N E +S
Sbjct: 472 PRTIKYQNNI---FEENGYLLKKMNIKYLISENANITLTEIRDFNKNNSNEEDINLHVSK 528
Query: 215 LFANRKKGH-FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELC 273
F N+ H F KG+ V ++KG+L NL G + V + + I P+ L K ++
Sbjct: 529 SFINKNSLHLFKKGERVKIMKGELYNLIGTITNVSDNVLTINPD--NLAKNFKFLPSDVT 586
Query: 274 KYFEPGNHVKVVSGTQAGATGMV--LKVEQHVLIILSDTTKEDIRVFADDVV----ESSE 327
KYF G++V V++G G +G++ L +++V +I S + + R D+ SSE
Sbjct: 587 KYFLEGDNVTVINGIHKGKSGLISLLDYKENVALIFSPSLNTEFRSSIQDLSACEHSSSE 646
Query: 328 VTTGITKIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLE 387
GI + + + DL+ L + G++ ++ + ++ + + I K
Sbjct: 647 GLGGINSLNGFSIGDLIELSDRQIGILTYIDKN--KHIRVLTSHNTTLHTTIGTITSKRS 704
Query: 388 KKSNV-QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKS 446
V +D N N + KD++++V G K K V +I++ +F +E GF+ S
Sbjct: 705 AIGQVCKDENGNIIQAKDIIQVVRGIHKNKVAVVNYIWKNKVFAKINKKIEDNGFVVMDS 764
Query: 447 SSCVVVGGSRANGDRNGDAYSRFNSLRTPPR-IPQSPGRYSRGGPPAGGRNRGGRGGHDA 505
+C++ G N + + N R IP+ Y +
Sbjct: 765 HNCILTG----NPNEKKRIVTHNNLFRANTSIIPRRNNTYQ------------------S 802
Query: 506 LVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVV 544
+G TVK+ G YKG G V+D + + L+ + K +
Sbjct: 803 FIGKTVKILSGVYKGLLGDVIDAERDEFTLLLKIKPKTI 841
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 1/116 (0%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAV- 65
K ++ I+ V D+LK YIY+EAD +K G + I ++ +VP++E+T + ++
Sbjct: 248 KDNDFNIKGVYVSDNLKGYIYVEADSLYMLKRFLLGFKFINLNEMTIVPVQELTSIFSMC 307
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEG 121
SK I + +VR+K G Y D+ ++ +V V+LIPRI+ + +G
Sbjct: 308 HSKVIIPKVNEYVRIKRGVYMNDIGQIFEVHEKGIYAIVRLIPRIEYDKYNHSKKG 363
>gi|326481035|gb|EGE05045.1| transcription elongation factor spt5 [Trichophyton equinum CBS
127.97]
Length = 865
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/317 (30%), Positives = 157/317 (49%), Gaps = 33/317 (10%)
Query: 272 LCKYFEPGNHVKVVSGTQ-AGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTT 330
L K F G+HVKV+ G++ GMV++++ + IL+D T ++I VF+ D+ E+ ++
Sbjct: 368 LEKRFSEGDHVKVIGGSKYRDELGMVVRIKDDRVTILTDMTIQEITVFSKDLREADDI-- 425
Query: 331 GIT-KIGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKK 389
G+ K+G Y++ DLV +D + G +++++ E+ +V+ +V + K+E++
Sbjct: 426 GVDGKLGQYDVHDLVQIDQTTVGCVVKLDRESMRVID---QNGSTQIVLPSRVLGKIEQR 482
Query: 390 SNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSS 447
+ DRN + + D V+ V G + + G + HI+R LF + ++AG + ++
Sbjct: 483 RHAVTTDRNGSEIKCGDTVKEVTG--EQRTGTILHIHRAFLFCTSKVVGDNAGIMVTRAI 540
Query: 448 SCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALV 507
+ V S + R+ S+ N P + Q G G PP G D LV
Sbjct: 541 NVTTVATSGSKLGRSAPDLSKMN-----PAL-QKNGMNGSGMPPPR------TFGRDRLV 588
Query: 508 GTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRY 567
G TV +R GP+KG G V D RVEL S KVV V++ +S V TP
Sbjct: 589 GKTVHIRRGPFKGLLGIVKDTTDIIARVELHSVSKVVPVEKENLS---VKETPI----AM 641
Query: 568 GMGSETP---MHPSRTP 581
G S TP SRTP
Sbjct: 642 GDSSRTPAWRASSSRTP 658
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 8 GSELQIRSVIALDH---LKNYIYIEADKEAHVKEACKGLRNIY-SQKVMLVPIREMTDVL 63
GS I+ + A + + YIY+EA K+A + +A G+ NIY K+ L+ ++EM D+L
Sbjct: 263 GSRNPIKIISAFERGGTMAGYIYVEARKQADIIDALDGMSNIYVRSKMTLISVKEMPDLL 322
Query: 64 AVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID 111
V+ K+ +L+ WVR+K G Y+GDLA++ +V+ VTV+L+PR++
Sbjct: 323 RVK-KSEELTPGGWVRIKRGRYQGDLAQLEEVETNGLNVTVRLVPRLE 369
>gi|401408159|ref|XP_003883528.1| hypothetical protein NCLIV_032830 [Neospora caninum Liverpool]
gi|325117945|emb|CBZ53496.1| hypothetical protein NCLIV_032830 [Neospora caninum Liverpool]
Length = 1130
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 190/385 (49%), Gaps = 38/385 (9%)
Query: 6 DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVL- 63
+KGS+ +I S A D LK Y+Y+EA + +KEA +GLR I + ++ +VP+ EMT V
Sbjct: 211 EKGSDCEIYSCYASDDLKGYVYVEAFSQYAIKEALQGLRLIRTYGEIKMVPLEEMTAVFN 270
Query: 64 AVESKAIDL-SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGR 122
+V S+A + R+ +VR+K G Y D+A++ V+ VTV+LIPR+DL AL ++ +
Sbjct: 271 SVRSRAPYIPQRNDFVRVKRGLYANDIAQIHQVEEQGIVVTVRLIPRLDLNALLDRDKRG 330
Query: 123 EVAKKKPFV---------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKD-G 172
+ ++K RF + DE +VE+ P T + GM F++ G
Sbjct: 331 DFSRKSDMAALKRMGGVRAQKRFFDRDEVDARGGQVEQGVLPGTVRF----AGMTFEESG 386
Query: 173 FLYKTVSMKS-ISAQNIQPTFDELEKFRTPGENG--ESDIASLS---TLFANRKKGHFMK 226
+L + ++++ + P+ E+ +F G+ G E D+ + + F R++ +
Sbjct: 387 YLLRRMAVRHLLVGSAAAPSLAEVTEF-VQGQQGKEEEDLHEIRRPLSSFLKRQRSAYRL 445
Query: 227 GDAVIVIKGDLKNLKGWVEKVDEEN--------VHIRPEMKGLPKTLAVNSKELCKYFEP 278
G+ V VI G+L+ ++G + + +E V + E K L + + + + K +
Sbjct: 446 GERVRVIGGELQGMRGKIGERRQEPEDDDEEEAVEVILEDKKLGPVM-LKTSHVVKDLQL 504
Query: 279 GNHVKVVSGTQAGATGMVLKVE--QHVLIILSDTTKEDIRVFADDVVESSEV---TTGIT 333
G +V+ V G AG +G++ V+ + + S + + + + + G++
Sbjct: 505 GENVRAVGGVNAGHSGLITSVDFSKQTATVFSPAAGLEFTCGLESLTAAPDAGLGEEGLS 564
Query: 334 KIGDYELRDLVLLDNNSFGVIIRVE 358
+ + L D V L GV++ ++
Sbjct: 565 SVRGFHLGDFVELTGGEKGVLVFID 589
>gi|380488411|emb|CCF37390.1| transcription initiation protein [Colletotrichum higginsianum]
Length = 510
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 127/455 (27%), Positives = 194/455 (42%), Gaps = 95/455 (20%)
Query: 295 MVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLVLLDNNSFGVI 354
MV+K+ + + L+ T ++ VF+ D+ E+S++ G +G YEL DLV LD + G I
Sbjct: 1 MVVKISEDRVTFLTXQTNTEVTVFSKDLREASDIG-GQGSLGQYELFDLVQLDPTTVGCI 59
Query: 355 IRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKK--SNVQDRNKNTVAVKDVVRIVEGP 412
++V+ E+ VL D +V +I KL K+ + DRN + + + DVVR G
Sbjct: 60 VKVDRESVVVLDQNGDTRQV---MPSQIANKLPKRKIAVAADRNGSEIRLDDVVREYGG- 115
Query: 413 CKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSL 472
+ +QG + HI+R +F+H+ E+AG K+ + + A G R A + +
Sbjct: 116 -QQRQGKIIHIHRAYVFLHNNDSNENAGVFVTKAGNVNTIA---AKGGRVLSAGPNLDQM 171
Query: 473 RTPPRIPQSP-GRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQ 531
P + ++P G S+ PP ++ GGR D + TV +R G YKG G V D
Sbjct: 172 N--PAMKRNPNGSESKMAPP---KSFGGR---DRAIDKTVIIRKGGYKGLLGIVKDATDT 223
Query: 532 SVRVELESQMKVVTVDRSMIS-DNVVVSTPYRDTPRYG-----------------MGSET 573
RVEL ++ K +TV + +S + + R G T
Sbjct: 224 HARVELHTKSKTITVPKDHLSFKDKITGAKIEINGRGRGGHSGPPGGGRGGHGDWQGGRT 283
Query: 574 PMHPS---RTPLHPYMTPMRDAGATPI-------HDGMRTPMRDRAWNPYTPMSPPRDNW 623
P+ S RTP TP +G TP + G RTP AW R +
Sbjct: 284 PVASSSSERTPAWGSRTPAPASGRTPAWKSSGPDYSGSRTP----AW-----ADGSRTAY 334
Query: 624 EDGNPGSWGT---SPQYQPGS----------------------------PPSRAYEAPTP 652
DGN ++G +P +Q G+ P+ APTP
Sbjct: 335 GDGNRTAYGGGSRTPAWQSGAKTPAHDAFGLGSKTPAYGGGDAWGSGSKTPAYGGSAPTP 394
Query: 653 GS----GWASTPGGNYSDAGTPRDSSSTYVNAPSP 683
G+ W TPG + DA TP + AP+P
Sbjct: 395 GASGSDSWGYTPGQSGYDAPTP---GGALLGAPTP 426
>gi|221488576|gb|EEE26790.1| supt5h protein, putative [Toxoplasma gondii GT1]
Length = 1130
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 192/392 (48%), Gaps = 54/392 (13%)
Query: 6 DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVL- 63
+KG + +I S A D LK Y+Y+EA + +KEA +GLR I + ++ +VP+ EMT V
Sbjct: 222 EKGKDCEIYSCYASDDLKGYVYVEAFSQYAIKEALQGLRLIRTYGEIKMVPLEEMTAVFN 281
Query: 64 AVESKAIDL-SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGR 122
+V S+A + R+ +VR+K G Y D+A++ V+ VTV+LIPR+DL AL ++ +
Sbjct: 282 SVRSRAPYIPQRNDFVRVKRGLYANDIAQIHQVEEQGMVVTVRLIPRLDLNALLDREKRG 341
Query: 123 EVAKKKPFV---------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKD-G 172
+ ++K RF + DE +VE+ P T + GM F++ G
Sbjct: 342 DFSRKSDMATLKQMGGVRAQKRFFDRDEVDARGGQVEQGILPGTVRF----AGMTFEESG 397
Query: 173 FLYKTVSMKS-ISAQNIQPTFDELEKFRTPGENGESDIASLS---TLFANRKKGHFMKGD 228
+L + ++++ + P+ E+ +F G++ E D+ + + F R++ + G+
Sbjct: 398 YLLRRMAVRHLLVGSAAAPSLAEVTEFVQQGKD-EDDLHEIRRPLSSFLKRQRSAYRLGE 456
Query: 229 AVIVIKGDLKNLKGWVEKVDE--------ENVHIRPEMKGLPKTLAVNSKELCKYFEPGN 280
V VI G+L+ ++G + + + E+V + + + L + + + + K + G
Sbjct: 457 RVRVIGGELQGMRGKIGERRQEPEDDDEEESVEVIFDDRKLGPVM-LKASHVVKDLQLGE 515
Query: 281 HVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDV-------VESSEVT---- 329
+V+ V G AG +G++ + D K+ VF+ +ES V
Sbjct: 516 NVRAVGGVNAGHSGLITSI---------DLAKQTATVFSPAAGLEFTCGLESLTVAPDAG 566
Query: 330 ---TGITKIGDYELRDLVLLDNNSFGVIIRVE 358
G++ + + L D V L + GV++ ++
Sbjct: 567 LGEEGLSSVRGFHLGDFVELTSGEKGVLVFID 598
>gi|221509076|gb|EEE34645.1| supt5h protein, putative [Toxoplasma gondii VEG]
Length = 1130
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 192/392 (48%), Gaps = 54/392 (13%)
Query: 6 DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVL- 63
+KG + +I S A D LK Y+Y+EA + +KEA +GLR I + ++ +VP+ EMT V
Sbjct: 222 EKGKDCEIYSCYASDDLKGYVYVEAFSQYAIKEALQGLRLIRTYGEIKMVPLEEMTAVFN 281
Query: 64 AVESKAIDL-SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGR 122
+V S+A + R+ +VR+K G Y D+A++ V+ VTV+LIPR+DL AL ++ +
Sbjct: 282 SVRSRAPYIPQRNDFVRVKRGLYANDIAQIHQVEEQGMVVTVRLIPRLDLNALLDREKRG 341
Query: 123 EVAKKKPFV---------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKD-G 172
+ ++K RF + DE +VE+ P T + GM F++ G
Sbjct: 342 DFSRKSDMATLKQMGGVRAQKRFFDRDEVDARGGQVEQGILPGTVRF----AGMTFEESG 397
Query: 173 FLYKTVSMKS-ISAQNIQPTFDELEKFRTPGENGESDIASLS---TLFANRKKGHFMKGD 228
+L + ++++ + P+ E+ +F G++ E D+ + + F R++ + G+
Sbjct: 398 YLLRRMAVRHLLVGSAAAPSLAEVTEFVQQGKD-EDDLHEIRRPLSSFLKRQRSAYRLGE 456
Query: 229 AVIVIKGDLKNLKGWVEKVDE--------ENVHIRPEMKGLPKTLAVNSKELCKYFEPGN 280
V VI G+L+ ++G + + + E+V + + + L + + + + K + G
Sbjct: 457 RVRVIGGELQGMRGKIGERRQEPEDDDEEESVEVIFDDRKLGPVM-LKASHVVKDLQLGE 515
Query: 281 HVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDV-------VESSEVT---- 329
+V+ V G AG +G++ + D K+ VF+ +ES V
Sbjct: 516 NVRAVGGVNAGHSGLITSI---------DLAKQTATVFSPAAGLEFTCGLESLTVAPDAG 566
Query: 330 ---TGITKIGDYELRDLVLLDNNSFGVIIRVE 358
G++ + + L D V L + GV++ ++
Sbjct: 567 LGEEGLSSVRGFHLGDFVELTSGEKGVLVFID 598
>gi|237837723|ref|XP_002368159.1| supt5h protein, putative [Toxoplasma gondii ME49]
gi|211965823|gb|EEB01019.1| supt5h protein, putative [Toxoplasma gondii ME49]
Length = 1130
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 102/392 (26%), Positives = 192/392 (48%), Gaps = 54/392 (13%)
Query: 6 DKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVL- 63
+KG + +I S A D LK Y+Y+EA + +KEA +GLR I + ++ +VP+ EMT V
Sbjct: 222 EKGKDCEIYSCYASDDLKGYVYVEAFSQYAIKEALQGLRLIRTYGEIKMVPLEEMTAVFN 281
Query: 64 AVESKAIDL-SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGR 122
+V S+A + R+ +VR+K G Y D+A++ V+ VTV+LIPR+DL AL ++ +
Sbjct: 282 SVRSRAPYIPQRNDFVRVKRGLYANDIAQIHQVEEQGMVVTVRLIPRLDLNALLDREKRG 341
Query: 123 EVAKKKPFV---------PPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKD-G 172
+ ++K RF + DE +VE+ P T + GM F++ G
Sbjct: 342 DFSRKSDMATLKQMGGVRAQKRFFDRDEVDARGGQVEQGILPGTVRF----AGMTFEESG 397
Query: 173 FLYKTVSMKS-ISAQNIQPTFDELEKFRTPGENGESDIASLS---TLFANRKKGHFMKGD 228
+L + ++++ + P+ E+ +F G++ E D+ + + F R++ + G+
Sbjct: 398 YLLRRMAVRHLLVGSAAAPSLAEVTEFVQQGKD-EDDLHEIRRPLSSFLKRQRSAYRLGE 456
Query: 229 AVIVIKGDLKNLKGWVEKVDE--------ENVHIRPEMKGLPKTLAVNSKELCKYFEPGN 280
V VI G+L+ ++G + + + E+V + + + L + + + + K + G
Sbjct: 457 RVRVIGGELQGMRGKIGERRQEPEDDDEEESVEVIFDDRKLGPVM-LKASHVVKDLQLGE 515
Query: 281 HVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDV-------VESSEVT---- 329
+V+ V G AG +G++ + D K+ VF+ +ES V
Sbjct: 516 NVRAVGGVNAGHSGLITSI---------DLAKQTATVFSPAAGLEFTCGLESLTVAPDAG 566
Query: 330 ---TGITKIGDYELRDLVLLDNNSFGVIIRVE 358
G++ + + L D V L + GV++ ++
Sbjct: 567 LGEEGLSSVRGFHLGDFVELTSGEKGVLVFID 598
>gi|68065598|ref|XP_674782.1| trancription factor [Plasmodium berghei strain ANKA]
gi|56493577|emb|CAH97788.1| trancription factor, putative [Plasmodium berghei]
Length = 815
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 166/378 (43%), Gaps = 53/378 (14%)
Query: 170 KDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH-FMKGD 228
++G+L K +++K + ++N T E+ F N E +S F N+ H F KG+
Sbjct: 468 ENGYLLKKMNIKYLISENANITLTEIRDFNKNNTNEEDINLHISKSFINKNSLHLFKKGE 527
Query: 229 AVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGT 288
V ++KG+L NL G + ++E + + P+ L K ++ KYF G++V V++G
Sbjct: 528 RVKIMKGELFNLIGTITNINENVLSVNPD--NLAKEFKFLPSDVTKYFTEGDNVTVINGL 585
Query: 289 QAGATGMV--LKVEQHVLIILSDTTKEDIRVFADDV---VESSEVTT----GITKIGDYE 339
G +G++ L ++++ +I S + + R D+ + SS T G+ + +
Sbjct: 586 HKGKSGLISLLDYKENIALIFSPSLNTEFRSSIQDLTGTISSSNNTVEGLGGVNTLNGFS 645
Query: 340 LRDLVLLDNNSFGVI--------IRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSN 391
+ DL+ L++ GV+ IRV + + ++L + +I CK
Sbjct: 646 IGDLIELNDRQIGVLTYIDKNKHIRVLTNSNKILHTTIGSITYKRSAIGQI-CK------ 698
Query: 392 VQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVV 451
D N N + KD +++++G K K V +I++ +F +E GF+ +C++
Sbjct: 699 --DENGNIIQSKDTIQLIKGAHKNKMAIVSYIWKNKIFAKINKKIEDNGFVVVDCENCLL 756
Query: 452 VGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTV 511
G N + ++ N R N + + +G TV
Sbjct: 757 SG----NVNEKKKIITQHNLFR--------------------NNNMQRKNTFQSFIGKTV 792
Query: 512 KVRLGPYKGYRGRVVDVK 529
K+ G YKG V+D +
Sbjct: 793 KILSGVYKGLLADVIDAE 810
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAV- 65
+ ++ I+ + D LK YIYIEAD +K G + I ++ +VP++E+T + A+
Sbjct: 242 QSNDFNIKGIYVSDDLKGYIYIEADSLYMLKRFLIGFKFINLNEISIVPVQELTSIFAMS 301
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI 110
SK + + +VR+K G Y D+ ++ +V V+LIPRI
Sbjct: 302 HSKVVIPKVNEYVRIKRGVYANDIGQIFEVHEKGIYAIVRLIPRI 346
>gi|83317252|ref|XP_731079.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23491005|gb|EAA22644.1| similar to suppressor of Ty 5 homolog [Plasmodium yoelii yoelii]
Length = 1212
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 174/402 (43%), Gaps = 53/402 (13%)
Query: 165 GGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGH- 223
+ ++G+L K +++K + ++N T E+ F N E +S F N+ H
Sbjct: 476 NNIFEENGYLLKKMNIKYLISENANITLTEIRDFNKNNTNEEDINLHISKSFINKNSLHL 535
Query: 224 FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVK 283
F KG+ V ++KG+L NL G + ++E + + P+ L K ++ KYF G++V
Sbjct: 536 FKKGERVKIMKGELFNLIGTITNINENVLSVNPD--NLAKEFKFLPTDVTKYFTEGDNVT 593
Query: 284 VVSGTQAGATGMV--LKVEQHVLIILSDTTKEDIRVFADDV---VESSEVTT----GITK 334
V++G G +G++ L ++++ +I S + + R D+ + SS T G+
Sbjct: 594 VINGLHKGKSGLISLLDYKENIALIFSPSLNTEFRSSIQDLTGTISSSSNTVEGLGGVNT 653
Query: 335 IGDYELRDLVLLDNNSFGVI--------IRVESEAFQVLKGVPDRPEVALVKLREIKCKL 386
+ + + DL+ L++ GV+ IRV + + ++L + +I CK
Sbjct: 654 LNGFSIGDLIELNDRQIGVLTYIDKNKHIRVLTNSNKILHTTIGSITYKRSAIGQI-CK- 711
Query: 387 EKKSNVQDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKS 446
D N N + KD +++++G K K V +I++ +F +E GF+
Sbjct: 712 -------DENGNIIQSKDTIQLIKGAHKNKTAIVSYIWKNKIFAKINKKIEDNGFVVVDC 764
Query: 447 SSCVVVGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDAL 506
+C++ G N + ++ N R N + +
Sbjct: 765 ENCLLSG----NVNEKKKIITQHNLFR--------------------NNNMQRKNTFQSF 800
Query: 507 VGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDR 548
+G TVK+ G YKG V+D + + L+ + K + R
Sbjct: 801 IGKTVKILSGVYKGLLADVIDAERDEFTLLLKIKPKTIRQKR 842
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAV- 65
+ SE I+ + D LK YIYIEAD +K G + I + +VP++E+T + A+
Sbjct: 255 QSSEFNIKGIYVSDDLKGYIYIEADSLYMLKRFLLGFKFINLNDISIVPVQELTSIFAMS 314
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI 110
SK + + +VR+K G Y D+ ++ +V V+LIPRI
Sbjct: 315 HSKVVIPKVNEYVRIKRGVYANDIGQIFEVHEKGIYAIVRLIPRI 359
>gi|154314433|ref|XP_001556541.1| hypothetical protein BC1G_05310 [Botryotinia fuckeliana B05.10]
Length = 510
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 131/233 (56%), Gaps = 14/233 (6%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQ-KVMLVPIREMTDVLAVESKAIDLSRDTWVRM 80
+K +IY+EA ++A + A GL N+Y + K+MLV I+EM D+L V +K+ + +VR+
Sbjct: 280 MKGFIYVEAQRQADILTAMDGLMNVYPRTKMMLVEIKEMPDLLRV-TKSPTVEVGAYVRL 338
Query: 81 KIG-NYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFV---PPPRF 136
+ Y GDLA+V++V + + V+ +PR+D + G + +K+P PP R
Sbjct: 339 RRPVKYAGDLAQVLEVTDTGLELRVRYVPRLDYGLHEDTSVGADGKRKRPVAGPRPPQRL 398
Query: 137 MNVDEARELHIR-VERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDEL 195
+ EA++ H + ++ R D T +YF + +G+ K V ++++ +++ PT +E+
Sbjct: 399 FSEAEAKKRHAKHLQGRPDTKTWNYFNE----EYINGYCEKEVKIQALITKDVNPTLEEV 454
Query: 196 EKFRTPGENGESDI---ASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVE 245
+F + E+G ++ A ++L A+ ++ GD + V +G+ K + G+ +
Sbjct: 455 TRFASGAEDGTENLDLNALAASLKASTANASYIPGDVIEVYEGEQKGVVGFTQ 507
>gi|123476898|ref|XP_001321619.1| KOW motif family protein [Trichomonas vaginalis G3]
gi|121904449|gb|EAY09396.1| KOW motif family protein [Trichomonas vaginalis G3]
Length = 900
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 175/733 (23%), Positives = 286/733 (39%), Gaps = 125/733 (17%)
Query: 25 YIYIEADKEAHVKEACKGLRNIYSQKVML-VPIREMTDVLAVESKAIDLSRDTWVRM--- 80
+IY+EA A C L I + M + EM + + +D +V +
Sbjct: 191 FIYVEARTLADANTLCSELPFIMNLNRMKNLKYSEMAKAMTIPRTEVDFHPGNFVEILKD 250
Query: 81 -KIGNY-KGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL--EGREVAKKKPFVP---- 132
+ G + KGD+ +V++++ R +V VKLIPRID + + E + A K+ +P
Sbjct: 251 SQSGYFVKGDIGQVINININRNKVMVKLIPRIDYDRIESDTLPEKKSKAAKEVRIPQADF 310
Query: 133 -PPRFMNVDEARELHIRVERRRDPMTGDY---FENIGGMLFKDGFLYKTVSMKSIS-AQN 187
P R +N + +++ GD F+ LF FLY + K +
Sbjct: 311 QPERIINHATITDTTLQI--------GDSTVEFKEYDNALFYGPFLYHEIETKKLQKVAY 362
Query: 188 IQPTFDELEKFRTPGENGESDI----ASLSTLFANRKKGHFMKGD-AVIVIKGDLKNLKG 242
IQ F +KF+ + E I ++ + F +GD A I+ + +++
Sbjct: 363 IQMDFG--KKFQDNFYDFEQRIPYFKNNMYSALGLTNSTTFNQGDIARILEPHEYQDVIV 420
Query: 243 WVEKVDEENVHIRP---------EMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGAT 293
V V +H+ P + G+ + S L KYF G+ VK+++G G
Sbjct: 421 DVLGVQGNIIHVAPRATNEVEKAQYDGI--EFDIQSDLLEKYFHEGDRVKIIAGANRGKI 478
Query: 294 GMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTT-GITK--------IGDYELRDLV 344
G+VL V+ T I++ + D + S +V T+ +G Y L D V
Sbjct: 479 GIVLGVDMK-------TFTAQIQITSIDAIVSEKVANLAHTRREEEIQIVLGQYRLNDFV 531
Query: 345 LLDNNSFGVIIRVESE-AFQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVK 403
+L + GVI R+E++ AF +L D L I CK + V+ N + +
Sbjct: 532 VLLDKQRGVIWRIENDIAFILL----DTGVAISADLSRILCK-ARDDTVRASNGKAITIS 586
Query: 404 DVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNG 463
VV++ + + V H +F+ + G S V
Sbjct: 587 SVVKVKD---ERYNATVIHTTHSKVFLQSQQKQTMGGLFVRPPSDITV------------ 631
Query: 464 DAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRG 523
TP + S G +GG +L G T+K+ GPYKG
Sbjct: 632 --------FTTPKNVAPSAG--------SGGFVIQRPKQDLSLKGQTIKIIKGPYKGLLA 675
Query: 524 RVVDVKGQSVRVELESQMKVVTVDRS--MISDNVVVSTPYRDTPR--YGMGSETPMH--P 577
V + G+ + V L + K+V + R+ M + VV D + + + P P
Sbjct: 676 DVKEATGEDMHVILHTTKKIVRLFRTNGMFT---VVKKDNNDFMKRLFSKDDDLPAESAP 732
Query: 578 SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQY 637
S T Y P T + P N Y + P + +P S+G++
Sbjct: 733 STTQQQTYDAPTYAQTTT-----QQEPAPSNYGNAYNSVYSP----QSASP-SYGSTTY- 781
Query: 638 QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP-YLP-STPGGQPMT 695
GSP S AY P G+ S+ G +Y G+P S+ Y SP +P +PG QP
Sbjct: 782 --GSPSSYAYNQPY--GGYGSSYGDSY---GSPASSAYAYGGQASPAAVPYGSPGAQPYG 834
Query: 696 PNSASYLPGTPGG 708
+A+ G+P
Sbjct: 835 SPAAAQPYGSPAA 847
>gi|145519103|ref|XP_001445418.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412873|emb|CAK78021.1| unnamed protein product [Paramecium tetraurelia]
Length = 806
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 147/672 (21%), Positives = 271/672 (40%), Gaps = 128/672 (19%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA-VESKA 69
L+I SV AL I+IEA+ E HV A +GL + LV + ++ E +
Sbjct: 171 LEIVSVFALKKFPAAIFIEANFEQHVMRAIEGLTIVRQCPPELVESEQCPNMFKPAEVEQ 230
Query: 70 IDLSRDTWVRMKIGN-YKGDLAKVVDVDNVRQRVTVKLIPRIDL--QAL----------- 115
ID+ WVR++ N Y GDLA+V+ VD R+ + +K++PR L ++L
Sbjct: 231 IDIEEGQWVRVRQHNIYSGDLARVMQVDQERKLIKLKVVPRQKLLMKSLEEEEENKKKNS 290
Query: 116 --------ANKLEGRE------VAKKKPFVPPPRFMNVDEAREL-----HIR-----VER 151
++ + +E + +PF +F + A+ L +IR ++
Sbjct: 291 KKNNANADQSRFQMKEEEGEPPIEDNEPFQRGSKFKFLKRAKYLQEQRKYIRGPKIPIQM 350
Query: 152 RRDPMTGDYFENIGGMLF-----------KDGFLYKTVSMKSISAQNIQPTFDELEKFRT 200
+ + D E + KDGF T+ + + NI+PT ++L+ F
Sbjct: 351 TKKSINDDNDEPTSQFFYTTIRDEWTSAKKDGFEIITLPVHQVLTGNIKPTVEDLQYFYP 410
Query: 201 PGENGESDIASLSTLFAN--RKKGHFMKGDAVIVIKGDLKNLKGWVEKV--DEENVHIRP 256
++ + L + +K GD + + K+ + V ++ DE + I
Sbjct: 411 DVQDYRLILQKLHSSLKQVVEQKSQIQIGDYITLTHDQAKSSRYKVSQILQDENKLIISK 470
Query: 257 EMKGLPKT--------LAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVE-------- 300
+K L ++ +L F+ V +VSG G +G ++K++
Sbjct: 471 TVKNKNNNEKRNYEYKLDISEAKLA--FKLYQQVSIVSGPNTGLSGTIIKMDDLTAQIST 528
Query: 301 ---QHVLIILSDTTKEDIRVFADDVVESSEVTTGITKIGDYELRDLV---LLDNNSFGVI 354
+ V ++SD + + D+ E+ + G K G ++ DLV L+DN+ G I
Sbjct: 529 EAGRIVDALISDLQSQKNVIKKMDIEENPDAGAGQQKPG-FKRNDLVKFGLIDND-IGCI 586
Query: 355 IRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSN-VQDRNKNTVAVKDVVRIVEGPC 413
+ + + VL ++ + I+ + ++N V++ N + +D+V I++G
Sbjct: 587 LNISNNEVSVLDLT---NQIKNINKLAIRNSINTRNNVVKNMYGNDIRQQDLVVILDGFY 643
Query: 414 KGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLR 473
K + V H+YR LF+ + G I K+++C +V S+
Sbjct: 644 KNNKATVLHVYRDYLFLFNGKFDNTQGVIIEKANNCGLVSSSK----------------- 686
Query: 474 TPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSV 533
+ P A ++ L G V +R G ++ YRG V +V +
Sbjct: 687 -------------KPDPGANTISQMPNEDWKNLRGQMVTIRKGQWQSYRGMVQEVTSRVA 733
Query: 534 RVELESQMKVVTVDRSMI-SDNVVVSTPYRDTPRYGMGSETPMHPS-------------R 579
++L ++ VV V I S++ TP++ G T + +
Sbjct: 734 TIQLSAKNLVVKVPLECIKSESSNSHLQVGKTPQHHPGMSTRVWDDLEGVQQSAMRGGYQ 793
Query: 580 TPLHPYMTPMRD 591
+P Y TPMR+
Sbjct: 794 SPYITYQTPMRN 805
>gi|224077932|ref|XP_002305463.1| hypothetical protein POPTRDRAFT_648691 [Populus trichocarpa]
gi|222848427|gb|EEE85974.1| hypothetical protein POPTRDRAFT_648691 [Populus trichocarpa]
Length = 64
Score = 93.6 bits (231), Expect = 4e-16, Method: Composition-based stats.
Identities = 43/53 (81%), Positives = 51/53 (96%)
Query: 362 FQVLKGVPDRPEVALVKLREIKCKLEKKSNVQDRNKNTVAVKDVVRIVEGPCK 414
QVLKGVP+RP+VALV+LREIKCK+EKK+NVQDR KNTV+VKDVVRI++GPCK
Sbjct: 5 LQVLKGVPERPDVALVRLREIKCKIEKKTNVQDRYKNTVSVKDVVRIIDGPCK 57
>gi|396082554|gb|AFN84163.1| transcription elongation factor Spt5 [Encephalitozoon romaleae
SJ-2008]
Length = 573
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 153/332 (46%), Gaps = 65/332 (19%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDL 72
I S+I D LK Y+YIEA ++ HV +A LR + +V +VP +EM + + S+ I
Sbjct: 109 IFSIICKDGLKGYLYIEAFQKQHVIDALDSLRGVSRNRVSVVPQKEMIEAITYHSQKIC- 167
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVP 132
W R++ G YK DL K+++ D + V ++ IPRID +K+ F P
Sbjct: 168 --GEWGRIRKGKYKNDLVKIIEFDE--EMVRIRAIPRID-------------GEKRLFNP 210
Query: 133 PP-RFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPT 191
+ +V ++R +I +RD + DGFL K V S+ +++PT
Sbjct: 211 ENFKSGSVIKSRGYYI---YKRDT-------------YVDGFLEKDVLRSSVDF-DVEPT 253
Query: 192 FDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEEN 251
F+ELE+F+ ++ +S GD V V +G+L +KG V ++ +
Sbjct: 254 FEELEEFQ--------EVCPISV------------GDKVRVTRGELIGIKGVVRSIN-GS 292
Query: 252 VHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTT 311
+ + G V S L K+F+ G V + G G+V+K ++ +I
Sbjct: 293 IAVVESNDG---KFEVQSSGLMKHFDIGESV-----SYKGENGVVVKADKREYVIAIRDF 344
Query: 312 KEDIRVFADDVVESSEVTTGITKIGDYELRDL 343
E+++V DD+ + KI YE + +
Sbjct: 345 TEELKVSIDDLKGPVAASAKNEKISGYERKKI 376
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 19/105 (18%)
Query: 503 HDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYR 562
D L+ V+++ G YKG+ G V +V R++L S MK V +++ I + P R
Sbjct: 378 RDPLINKEVQIQSGEYKGHSGVVKEVDRNMCRIQLNSNMKFVIMEKDFI------TVPSR 431
Query: 563 DT----PRYGMGSETPMHPSRTPLHP---YMTP-MRDAGATPIHD 599
+ PRY T + SRTP + Y TP + GA + D
Sbjct: 432 EISNRPPRY-----TGLTGSRTPGYKTPGYKTPGYKTPGAYSLED 471
>gi|297724235|ref|NP_001174481.1| Os05g0506200 [Oryza sativa Japonica Group]
gi|255676476|dbj|BAH93209.1| Os05g0506200, partial [Oryza sativa Japonica Group]
Length = 586
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 394 DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVG 453
D K + + D V ++EGP +GKQG V+H+Y GILFIH+ E++GF CA+ SSC V
Sbjct: 6 DHKKKIICINDTVNVLEGPFQGKQGVVKHLYMGILFIHNESESENSGFFCAQCSSCENVK 65
Query: 454 -----GSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDAL-- 506
S G+ + + F+ + R + P R +R + L
Sbjct: 66 KRKELASFTFGNSDDNPIPMFSYEQNEQRDNERPYRSTR----------------EQLFS 109
Query: 507 VGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS------DNV--VVS 558
+G +++R GP KGY RVV + V V+L+S +K+VTV +S DN S
Sbjct: 110 IGEMLRIRKGPMKGYLCRVVRIFRNDVTVKLDSLLKIVTVQAEFLSVPAKRGDNSSGAPS 169
Query: 559 TPY---RDTPRYGMGSETPMHPSRTPLHPYMTPMRDA 592
P+ D P + G + S P P+++A
Sbjct: 170 GPFGSEADKPSWDNGLPSFGSDSWQPFSSAALPVQNA 206
>gi|296087214|emb|CBI33588.3| unnamed protein product [Vitis vinifera]
Length = 124
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M K +D G++LQI ++DH+K +IYIEADK+ + EACKGL IY+ +V V
Sbjct: 24 MNKYVDLQSLGTKLQIIYAFSVDHVKGFIYIEADKQCDINEACKGLCIIYTSRVAPVLKN 83
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAK 91
E+T +L+V SK I+ S TW RMK G YKGDLA+
Sbjct: 84 EVTHLLSVRSKCIESSEGTWARMKNGKYKGDLAQ 117
>gi|401828288|ref|XP_003888436.1| SPT5-like transcription initiation protein [Encephalitozoon hellem
ATCC 50504]
gi|392999708|gb|AFM99455.1| SPT5-like transcription initiation protein [Encephalitozoon hellem
ATCC 50504]
Length = 578
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 144/311 (46%), Gaps = 65/311 (20%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDL 72
+ S++ D LK Y+Y+EA ++ HV +A + LR + +V +VP +EM + + S+ I
Sbjct: 109 VFSIVCKDGLKGYLYVEAFQKQHVIDALESLRGVSRNRVSVVPQKEMIEAITYHSQKI-- 166
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVP 132
W R++ G YK DL K+++ D + V ++ +PRID +KK F P
Sbjct: 167 -CGEWGRIRKGKYKNDLVKIIEFDE--EMVRIRAVPRID-------------GEKKLFNP 210
Query: 133 PP-RFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPT 191
+ +V ++R +I +RD + DGFL K V S+ +++PT
Sbjct: 211 ENFKSGSVIKSRGYYI---YKRDT-------------YVDGFLEKDVLRSSVDF-DVEPT 253
Query: 192 FDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEEN 251
F+ELE+F+ + +S GD V V +G+L +KG V+ ++
Sbjct: 254 FEELEEFQ--------QVCPISA------------GDKVRVTQGELIGMKGTVQSINGSI 293
Query: 252 VHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTT 311
I + V S L K+F+ G V + G G+V+K + +I
Sbjct: 294 AVIESK----DGKFEVQSSGLMKHFDIGETV-----SYKGENGVVVKADNKECVIAIRDF 344
Query: 312 KEDIRVFADDV 322
E++RV DD+
Sbjct: 345 TEELRVSIDDL 355
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 54/107 (50%), Gaps = 18/107 (16%)
Query: 503 HDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYR 562
D L+ V+++ G YKG+ G V +V R++L S MK VTV+R I +T YR
Sbjct: 378 RDPLINKEVQIQSGEYKGHNGVVKEVDRNMCRIQLNSNMKFVTVERDYI------TTSYR 431
Query: 563 DTP----RYG--MGSETPMHPS---RTPLHPYMTP-MRDAGATPIHD 599
+ RY +GS TP + + +TP Y TP + GA + D
Sbjct: 432 EASSRQLRYNEFIGSRTPGYKTPGYKTP--GYRTPGYKTPGAYSLED 476
>gi|361068961|gb|AEW08792.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|361068963|gb|AEW08793.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169972|gb|AFG68197.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169974|gb|AFG68198.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169976|gb|AFG68199.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169978|gb|AFG68200.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169980|gb|AFG68201.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169982|gb|AFG68202.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169984|gb|AFG68203.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169986|gb|AFG68204.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169988|gb|AFG68205.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169990|gb|AFG68206.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169992|gb|AFG68207.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169994|gb|AFG68208.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169996|gb|AFG68209.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383169998|gb|AFG68210.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383170000|gb|AFG68211.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383170002|gb|AFG68212.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
gi|383170004|gb|AFG68213.1| Pinus taeda anonymous locus CL1640Contig1_03 genomic sequence
Length = 68
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 57/67 (85%)
Query: 770 NGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDM 829
+G+ +TA +EI+I+PP+K+DKIKI+ G RG TGKLIG+DG DGIVK+D +LD+KILDM
Sbjct: 2 DGEVVTAAASEIDIIPPKKSDKIKIINGEQRGGTGKLIGIDGADGIVKMDETLDIKILDM 61
Query: 830 AILAKLA 836
+ LAKLA
Sbjct: 62 SNLAKLA 68
>gi|19074993|ref|NP_586499.1| similarity to putative transcription factor SPT5 [Encephalitozoon
cuniculi GB-M1]
gi|19069718|emb|CAD26103.1| similarity to putative transcription factor SPT5 [Encephalitozoon
cuniculi GB-M1]
Length = 571
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 143/311 (45%), Gaps = 65/311 (20%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDL 72
+ S+I D LK Y+Y+EA ++ HV +A + LR + +V +VP +EM + + + I
Sbjct: 107 VFSIICKDGLKGYLYVEAFQKQHVVDALESLRGVSRSRVSVVPQKEMIEAMTYHEQRIC- 165
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVP 132
W R++ G YK DLAK+++ D + V ++ IPRID +KK F P
Sbjct: 166 --GEWGRIRNGKYKNDLAKIIESDG--EMVRIRTIPRID-------------GEKKLFNP 208
Query: 133 PP-RFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPT 191
+ +V ++R +I +RD + DGFL K V SI +++PT
Sbjct: 209 ENFKSGSVIKSRGYYI---YKRDT-------------YVDGFLEKDVLKNSIDF-DVEPT 251
Query: 192 FDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEEN 251
F+ELE+F +S GD V V +G+L +KG V +
Sbjct: 252 FEELEEFHQA--------CPISV------------GDKVRVTRGELIGMKGVVRSIS-GT 290
Query: 252 VHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTT 311
+ + G V S L K+F+ G V + G G+V+K+E I+ +
Sbjct: 291 IAVVESRDG---KFEVQSSGLVKHFDLGETV-----SYKGENGVVVKIEGKDCIVATRDF 342
Query: 312 KEDIRVFADDV 322
E+++V DD+
Sbjct: 343 TEELKVSIDDL 353
Score = 46.2 bits (108), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 504 DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS--DNVVVSTPY 561
D L+ V+++ G YKG+ G V +V R++L S MK VTV++S I+ +S P
Sbjct: 377 DPLINKEVQIQCGEYKGHGGVVKEVDRNICRIQLNSNMKFVTVEKSRIAVLGREGLSKPL 436
Query: 562 RDTPRYGMGSETPMHPS---RTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPY 613
R + +GS+TP + + RTP Y TP A P D + D NPY
Sbjct: 437 RYSE--AIGSKTPGYKTPGYRTP--GYKTPSACALEDPGIDWL-----DEKDNPY 482
>gi|449328586|gb|AGE94863.1| putative transcription factor spt5 [Encephalitozoon cuniculi]
Length = 571
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 143/311 (45%), Gaps = 65/311 (20%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDL 72
+ S+I D LK Y+Y+EA ++ HV +A + LR + +V +VP +EM + + + I
Sbjct: 107 VFSIICKDGLKGYLYVEAFQKQHVVDALESLRGVSRSRVSVVPQKEMIEAMTYHEQRI-- 164
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVP 132
W R++ G YK DLAK+++ D + V ++ IPRID +KK F P
Sbjct: 165 -CGEWGRIRNGKYKNDLAKIIESDG--EMVRIRTIPRID-------------GEKKLFNP 208
Query: 133 PP-RFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPT 191
+ +V ++R +I +RD + DGFL K V SI +++PT
Sbjct: 209 ENFKSGSVIKSRGYYI---YKRDT-------------YVDGFLEKDVLKNSIDF-DVEPT 251
Query: 192 FDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEEN 251
F+ELE+F +S GD V V +G+L +KG V +
Sbjct: 252 FEELEEFHQA--------CPISV------------GDKVRVTRGELIGMKGVVRSIS-GT 290
Query: 252 VHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTT 311
+ + G V S L K+F+ G V + G G+V+K+E I+ +
Sbjct: 291 IAVVESRDG---KFEVQSSGLVKHFDLGETV-----SYKGENGVVVKIEGKDCIVATRDF 342
Query: 312 KEDIRVFADDV 322
E+++V DD+
Sbjct: 343 TEELKVSIDDL 353
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 14/115 (12%)
Query: 504 DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS--DNVVVSTPY 561
D L+ V+++ G YKG+ G V +V R++L S MK VTV++S+I+ +S P
Sbjct: 377 DPLINKEVQIQCGEYKGHGGVVKEVDRNICRIQLNSNMKFVTVEKSLIAVLGREGLSKPL 436
Query: 562 RDTPRYGMGSETPMHPS---RTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPY 613
R + +GS+TP + + RTP Y TP A P D + D NPY
Sbjct: 437 RYSE--AIGSKTPGYKTPGYRTP--GYKTPSVCALEDPGIDWL-----DEKDNPY 482
>gi|167540091|ref|XP_001733557.1| suppressor of ty [Entamoeba dispar SAW760]
gi|165893855|gb|EDR21974.1| suppressor of ty, putative [Entamoeba dispar SAW760]
Length = 727
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 153/350 (43%), Gaps = 28/350 (8%)
Query: 275 YFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVTTGITK 334
YF G+ VKV G A TG++ ++ + + +D K I V D+ + E+ IT
Sbjct: 376 YFNVGDRVKVTDGMYANETGIIEAIKGDEVFVFTDKKKASICVSQIDLENTEEINQEITV 435
Query: 335 IGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKK--SNV 392
+ Y + D V L + G+I+ + + ++L + D + V I+ K +++ +
Sbjct: 436 LNGYYVNDFVQL-SEGVGLILEILPQNNRLL-VLNDNNKTQEVDPSVIQGKFQERRDARC 493
Query: 393 QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGI-LFIHDRHHLEHAGFICAKSSSCVV 451
+DRN+N V++ D+V IV G G+ + HIY+ +F+ LE+ +I
Sbjct: 494 RDRNRNYVSLGDLVNIVSGVYSGRVAKILHIYQFTKIFVQCPGVLENNSYIVV------- 546
Query: 452 VGGSRANGDRNGDAYSRFNSLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTV 511
N D G S +S+ R + + R G V
Sbjct: 547 -----TNKDIVGPNASHQSSISKAERRNERREDRREDRNNFEDPSSVNRISFRDFKGKKV 601
Query: 512 KVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGS 571
VR GPYKGY+G + ++KG+ +EL + +++ +++ S+ R P+ +
Sbjct: 602 IVREGPYKGYQGTIRNIKGKDFMIELSANQRIIKLEQEAFG--TCDSSTCR--PQISHMA 657
Query: 572 ETPMHPSRTPLHPYMTPMRDAG---ATPIHDGMRTPMRDRAWNPYTPMSP 618
P R +P TP ++ TP+ + TPM NP TPM+P
Sbjct: 658 TPGQQPMRVTNYPPSTPAMNSQYTTQTPMPNYHNTPM----LNPATPMTP 703
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
Query: 26 IYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDLSRDTWVRMKIGNY 85
+YIEA E +AC G+R++Y + + +++ ++L V + +++VR+ Y
Sbjct: 162 VYIEAMTERKFADACDGVRDLYINTIHALNDKQIEELL-VSRMPTTIEPNSYVRINAEPY 220
Query: 86 KGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKK 127
KGDL VV+ ++V VKL+PR ++ +E+AKK
Sbjct: 221 KGDLGVVVETTE-NKKVIVKLVPRFNIAHF------QEIAKK 255
>gi|296084419|emb|CBI24807.3| unnamed protein product [Vitis vinifera]
Length = 227
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Query: 1 MQKCIDK---GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
MQK +D G++LQI SV +++H+K +IYIEADK+ + E+CKGL IY+ +V V
Sbjct: 58 MQKYVDLQSLGTKLQIISVFSVEHVKGFIYIEADKQCDINESCKGLCTIYTSRVAPVTKN 117
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDV 95
E+T +L++ SK + S TW MK G YKGDLA++V V
Sbjct: 118 EVTHLLSIRSKCNESSEGTWAPMKNGKYKGDLAQIVVV 155
>gi|303391625|ref|XP_003074042.1| transcription elongation factor Spt5 [Encephalitozoon intestinalis
ATCC 50506]
gi|303303191|gb|ADM12682.1| transcription elongation factor Spt5 [Encephalitozoon intestinalis
ATCC 50506]
Length = 579
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 145/311 (46%), Gaps = 65/311 (20%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDL 72
I S++ D LK Y+Y+EA ++ H+ +A + LR + +V +VP +EM + + + I
Sbjct: 110 IFSIVCKDGLKGYLYVEAFQKQHIIDALESLRGVSRNRVSVVPPKEMIEAMTYHEQKIC- 168
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVP 132
W R++ G YK DL K+++ D + V ++ +PRID +KK F P
Sbjct: 169 --GEWGRIRKGKYKNDLVKIIEYDE--EMVRIRAVPRID-------------GEKKLFNP 211
Query: 133 PP-RFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPT 191
+ +V ++R ++ +RD + DGFL K V +KS +++PT
Sbjct: 212 DNFKSGSVIKSRGYYV---YKRDT-------------YVDGFLEKDV-LKSSVDFDVEPT 254
Query: 192 FDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEEN 251
F+ELE+F+ I +S GD V V +G+L +KG V ++
Sbjct: 255 FEELEEFQ--------QICPISV------------GDKVRVTRGELIGVKGIVRSINGSI 294
Query: 252 VHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTT 311
+ +G + S L K F+ G V + G G+V+K+++ II
Sbjct: 295 AVV----EGKDGKFEIQSTGLVKNFDVGEMV-----SYKGENGVVVKIDKKSCIIAIRDF 345
Query: 312 KEDIRVFADDV 322
E+++V DD+
Sbjct: 346 TEELKVNIDDL 356
>gi|429961359|gb|ELA40904.1| hypothetical protein VICG_02044 [Vittaforma corneae ATCC 50505]
Length = 584
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 145/321 (45%), Gaps = 64/321 (19%)
Query: 2 QKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTD 61
++ ++ + ++ S++ D LK YIYIE+ K+ V++ +RN+ ++ +VP +EM +
Sbjct: 98 ERIYERAKDAEVCSIVQKDGLKGYIYIESYKKQAVEDVLSTVRNVSRKRFTVVPFKEMVE 157
Query: 62 VLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEG 121
++ + I + R+K G Y+GDL ++ ++N V VK IPRI+ L + +
Sbjct: 158 AISYKKNII---VSDFARIKGGKYRGDLVQI--LENYEDVVKVKAIPRIN--NLKRRFDP 210
Query: 122 REVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMK 181
E + F + N D +++G L K + +K
Sbjct: 211 SEFRGEAVFKDGGYYYNRD---------------------------FYRNGCLEK-IMLK 242
Query: 182 SISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLK 241
S +++PTF EL E D+ KG+F + V V+KGDLKN+
Sbjct: 243 SNLDFDVEPTFAEL---------SELDL-----------KGNFDVNETVKVLKGDLKNIV 282
Query: 242 GWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQ 301
G V+ + + NV +K + VN +L K+FE G + G G+VL V+
Sbjct: 283 GVVDSI-KGNVAT---LKKDGRIYEVNVDDLEKFFEVGQE-----ASYRGENGVVLSVQG 333
Query: 302 HVLIILSDTTKEDIRVFADDV 322
+I+ D ++ DDV
Sbjct: 334 RRIILGMDGFTREVECSIDDV 354
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 777 LPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVK 817
L +EIE P K DK+ IM G RG G LI + G G+V+
Sbjct: 525 LSHEIEFCEPEKYDKVIIMEGDRRGTDGTLISISGDRGVVR 565
>gi|269860187|ref|XP_002649816.1| transcription initiation protein SPT5 [Enterocytozoon bieneusi
H348]
gi|220066757|gb|EED44229.1| transcription initiation protein SPT5 [Enterocytozoon bieneusi
H348]
Length = 592
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 145/310 (46%), Gaps = 64/310 (20%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDL 72
I +++ D LK YIYIE+ K++ V EA ++N+Y ++ VPI EM DVL + + +
Sbjct: 125 ITAILQKDGLKGYIYIESFKKSAVDEAVSKVKNVYKNRIAAVPIAEMVDVLNSKKEYM-- 182
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVP 132
+ + R+K G YKGDLA++ ++N +++IPRID K+
Sbjct: 183 -INEYGRVKNGKYKGDLAQI--LENYEDSCQIRIIPRID--------------GKQCLFD 225
Query: 133 PPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTF 192
P +F N R+ G Y+ N +KDGFL K V S+ N + +
Sbjct: 226 PDKFQNKAIFRD-------------GGYYYNRD--FYKDGFLIKMVLKDSLDF-NTEVSV 269
Query: 193 DELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
+EL+KF+ +I+ L G+ VI+GDLK G + V+ +
Sbjct: 270 EELKKFQ--------NISPLKI------------GERAKVIRGDLKGFLGQIVSVNGNSY 309
Query: 253 HIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTK 312
I KT +++ +L + + G+ + + G G+VLK+ + +++ +
Sbjct: 310 TIT----NGKKTFDIDTLDLKRDVQLGD-----TFSYKGKNGIVLKINGNTVVLGIRNME 360
Query: 313 EDIRVFADDV 322
+++V DD+
Sbjct: 361 AEMKVSVDDL 370
Score = 40.0 bits (92), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 506 LVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTP 565
L+G +VK+ G +KG G V ++ S R+ L S + V V+RS I + +V S ++
Sbjct: 394 LIGKSVKITHGEFKGLIGTVKEINRMSCRIRLGSNSEYVMVNRSAIKE-IVKSNAKINSA 452
Query: 566 RYGMGSETPMHPSRTPLHPYMTP 588
R +G +TP +TP Y TP
Sbjct: 453 RDDIGLKTPGF--KTP--GYTTP 471
>gi|357128813|ref|XP_003566064.1| PREDICTED: uncharacterized protein LOC100838678 [Brachypodium
distachyon]
Length = 1118
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 82/167 (49%), Gaps = 25/167 (14%)
Query: 394 DRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVG 453
D K +++ D V+++EGP +GKQG V+H+Y GILFIH+ E+ GF CA+ SC +
Sbjct: 6 DHQKKIISINDTVKVLEGPAQGKQGVVKHLYMGILFIHNDSESENNGFFCAQCGSCENIK 65
Query: 454 GSRANGDRNGDAYSRFN------SLRTPPRIPQSPGRYSRGGPPAGGRNRGGRGGHDAL- 506
R + S F+ S +T R P R + L
Sbjct: 66 KRRELASSEDNPISMFSDSPFMPSEQTEQRNNDRPYRA-----------------REQLF 108
Query: 507 -VGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS 552
+G +++R GP KGY RVV + V V+L+S +K+VTV +S
Sbjct: 109 SIGEMLRIRKGPMKGYLCRVVRIFRNDVTVKLDSLLKIVTVQAEFLS 155
>gi|432889364|ref|XP_004075240.1| PREDICTED: transcription elongation factor SPT5-like [Oryzias
latipes]
Length = 938
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 122/250 (48%), Gaps = 35/250 (14%)
Query: 595 TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQ--YQPG-SPPSRAYEAPT 651
TP + + +P + +NP TP +P N E +P + SPQ YQP SP S P+
Sbjct: 713 TPGYPEVPSPQVNPQYNPQTPGTPAMYNTEQYSPYA-APSPQGSYQPSPSPQSYHQVVPS 771
Query: 652 PGSGWASTPGGNYSDAGT-PRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGG-Q 709
P G+ +T +S A P S Y +PSP S G PMTP + S PGG
Sbjct: 772 P-VGYQNT----HSPASYHPTPSPMAYQASPSP---SPVGYSPMTPGAPS-----PGGYN 818
Query: 710 PMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSGE----ESVVGVIREVLPDGSCRVVL 765
P TPG+ S W DILVR +GVIR V C V +
Sbjct: 819 PHTPGSNIEQGSSD---------WVTTDILVRVKDSFMDLMGQMGVIRSV-SGAMCSVFM 868
Query: 766 GSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVK 825
S +I++ +++E V P K +K+K++ G R ATG L+ +DG DGIV++++ +K
Sbjct: 869 QESEKVVSISS--DQLEPVTPTKNNKVKVILGEDREATGILLSIDGDDGIVRMELDDQLK 926
Query: 826 ILDMAILAKL 835
IL++ L +L
Sbjct: 927 ILNLRFLGRL 936
>gi|133777599|gb|AAI23816.1| SUPT5H protein [Bos taurus]
Length = 340
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 115/249 (46%), Gaps = 34/249 (13%)
Query: 608 RAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRA---------YEAPTPGSGWAS 658
A NP TP P +P S +PQY P +P + A Y AP+P +
Sbjct: 106 EASNPQTPGYP--------DPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQP 157
Query: 659 TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT--- 715
+P P + ++P+ Y P+ PM AS P G PMTPG
Sbjct: 158 SPSPQSYHQVAPSPAGYQNTHSPASYHPTP---SPMA-YQASPSPSPVGYSPMTPGAPSP 213
Query: 716 GGLDAMSPVIGAD-NEGPWFMPDILVRRSG---EESVVG---VIREVLPDGSCRVVLGSS 768
GG + +P G + N W DI V+ + VVG VIR V G C V L S
Sbjct: 214 GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDS 272
Query: 769 GNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILD 828
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+ +KIL+
Sbjct: 273 EKVVSISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILN 330
Query: 829 MAILAKLAQ 837
+ L KL +
Sbjct: 331 LRFLGKLLE 339
>gi|378756372|gb|EHY66396.1| hypothetical protein NERG_00036 [Nematocida sp. 1 ERTm2]
Length = 556
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 136/302 (45%), Gaps = 50/302 (16%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAV-E 66
+++ I +V+ + +K YIYIEA ++ V +A G+ + + +P +EM DVL + E
Sbjct: 142 ANKINITAVLTNEIVKGYIYIEAYQKQAVLQAIDGIFGAFKTNITQIPNKEMADVLYIPE 201
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI-DLQALANKLEGREVA 125
+ ++R+ G + G++A++ + + +++VKL+P+I D L N
Sbjct: 202 LDPVIYKEGNYLRVIKGAHSGEIAQIDSLGTGKDKISVKLVPKINDKHKLFN-------- 253
Query: 126 KKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISA 185
P N E ++ + M +KDG+L K++ + ++A
Sbjct: 254 --------PNDFNKSEIYKMSSSTWVYKKEM------------YKDGYLLKSIPVVYLTA 293
Query: 186 QNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKG-HFMKGDAVIVIKGDLKNLKGWV 244
+P GE ST + G HF+K + V V+ G LK G V
Sbjct: 294 --------------SPAITGEEK-RWFSTAENKKTSGSHFVKDEIVEVMFGGLKGAVGKV 338
Query: 245 EKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVL 304
V+EENV I K K + V E+ K + G+ V VVSG + G G V+ + + L
Sbjct: 339 LVVEEENVTI----KIGDKKIVVARDEIQKKYAIGDEVLVVSGRKRGKCGFVVGISDNKL 394
Query: 305 II 306
+I
Sbjct: 395 MI 396
>gi|339263752|ref|XP_003366997.1| transcription elongation factor SPT5 [Trichinella spiralis]
gi|316963844|gb|EFV49246.1| transcription elongation factor SPT5 [Trichinella spiralis]
Length = 277
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 29/201 (14%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L I+S+I + LK IYIEA K HV A +G+ +Y V +VPI+E DV V
Sbjct: 77 LLIKSIIVKEGLKGMIYIEAYKMPHVMRAIEGVSTLYKNNVRMVPIKETPDVFKVIKDTS 136
Query: 71 DLSRDTWVRMKIGNYKGDLAKV--------------------VD-VDNVRQRVTVKLIPR 109
L +VR+K YK D+A++ VD VD ++ + +KLIPR
Sbjct: 137 ALKPGVFVRVKRSVYKDDIAQIFTSAIAIAERCCDKLDKKVLVDWVDLSQKSIHLKLIPR 196
Query: 110 IDLQALANKLEG---REVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGG 166
ID + + + KK+ PP + ++D R + V + G+++ G
Sbjct: 197 IDYTRMRGAMRSAGETDAPKKRKARPPAKLFDLDAVRAIGGEVGK-----DGEFYVFEGN 251
Query: 167 MLFKDGFLYKTVSMKSISAQN 187
+ GFLYK++++ ++ N
Sbjct: 252 RYSRQGFLYKSMAISAVILSN 272
>gi|300706954|ref|XP_002995706.1| hypothetical protein NCER_101325 [Nosema ceranae BRL01]
gi|239604905|gb|EEQ82035.1| hypothetical protein NCER_101325 [Nosema ceranae BRL01]
Length = 566
Score = 76.3 bits (186), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 126/272 (46%), Gaps = 60/272 (22%)
Query: 12 QIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAID 71
+I S+IA D LK YIYIEA ++ V ++ + +R I+ K+ +VP EM + ++ + D
Sbjct: 108 KICSIIAKDGLKGYIYIEAYQKQQVLDSFEKIRGIFRNKLSIVPQNEMIEAISYKD---D 164
Query: 72 LSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI-DLQALANKLEGREVAKKKPF 130
LS + R+K G YKGDL +++ + V V+++PRI +++ L + +E ++
Sbjct: 165 LSNVEFGRLKKGKYKGDLVQIIGSNG--DMVKVRVMPRINEIKKLFDPVEYKDEV----- 217
Query: 131 VPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQP 190
+ E ++I +RD L+ +G+L K + S+ +I+P
Sbjct: 218 --------IKEGDNIYI---YKRD-------------LYVNGYLEKEILRSSVDL-DIEP 252
Query: 191 TFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEE 250
F+ELE+F + F GD V VIKG+L KG V+ V
Sbjct: 253 NFNELEQFNI--------------------RKRFDAGDKVKVIKGELIGTKGVVKSVTGP 292
Query: 251 NVHIRPEMKGLPKTLAVNSKELCKYFEPGNHV 282
I E K + S L KY+ G V
Sbjct: 293 MTIIVAE----GKNFEIFSNFLDKYYNIGEEV 320
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 503 HDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYR 562
D L+ V++R G YKGY G V D+ R+++ S +K V+V R + + ++ +
Sbjct: 377 RDNLINKQVQIRKGQYKGYIGIVKDIYMNKCRIQISSNLKYVSVPREDLVEFIINNEIEN 436
Query: 563 DTPRY--GMGSETPMHPSRTPLHPYMTPMRD 591
T R + ++TP + P++ + RD
Sbjct: 437 VTKRTFSSIVTKTPAYEPDGPINLNIDKNRD 467
>gi|118346425|ref|XP_976854.1| KOW motif family protein [Tetrahymena thermophila]
gi|89288458|gb|EAR86446.1| KOW motif family protein [Tetrahymena thermophila SB210]
Length = 778
Score = 74.3 bits (181), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 141/634 (22%), Positives = 248/634 (39%), Gaps = 119/634 (18%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVL---AVESKA 69
I S+ + +++ IYIE + V + K+ LV I E + E ++
Sbjct: 170 IYSISYVPSVESLIYIEGVNKRAVINFLDKYPDCNCNKIELVNIEEFQAIFEDQGKEQES 229
Query: 70 IDLSRDTWVRM----KIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVA 125
+ +VR+ + +Y D+ ++ + RV VKLIPR+ ++ + K E
Sbjct: 230 YNAEVGQFVRISRKARNSDYINDIGQIHFIKK-NNRVVVKLIPRVRIEDMRKKYEQMNKN 288
Query: 126 KKK----PFV----------------------------------------PPPRFMNVDE 141
KK FV P +F ++DE
Sbjct: 289 SKKRNQDSFVQVEGDAEDDQANKKGKFPYNKFGNQPVVPTRTVDEILKTRPEQQFFSLDE 348
Query: 142 AR----ELHIRVERRRDPMTGDYFENIGGMLFKD-GFLYKTVSMKSISAQNIQPTFDELE 196
E + V P EN LF+ G++YKT + K + + +EL+
Sbjct: 349 YEKDWSECYKAVSEEYRP------ENESTNLFQHCGYVYKTFNCKDLIFNEQLKSLEELK 402
Query: 197 KFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRP 256
KF E E + L + F+ GD V++ LKG + + +E +
Sbjct: 403 KFYPHLELDEIMNQNGRFLKMANNQTTFVVGDPVLIDN----TLKGKIISLGKETAKVLI 458
Query: 257 EMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIR 316
+ K L K+L KYFE G+ VKV+SGT G TG VL + V + +D I
Sbjct: 459 KKKKLSIEEEYPLKQLVKYFEDGSRVKVISGTSEGITGTVLSTKGDVCEVFTDNNNT-IE 517
Query: 317 VFADDVVESSEVTTGITKI-----GDYEL----RDLVLLDN-NSFGVIIRVESEAFQVLK 366
V D+ + E + KI D L +DLV L N+ G+I+ + + ++L
Sbjct: 518 VRTKDLAITGEASQDAEKIVVNESSDRNLGLKKKDLVKLTGFNNVGLILDISKDYIKIL- 576
Query: 367 GVPDRPEVALVKLREIKCKLEKKSNV-QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYR 425
++ V I K++ + + ++ N + + I +G G Q V H+Y+
Sbjct: 577 --DQNGKIKNVSSFSINTKIDTRKYIGKNAEGNNITNNSNIIIKQGQYSGYQCQVIHVYK 634
Query: 426 GILFIH-----DRHHLEHAGFICAKSSSCVVVGGSRANGDRNGD-AYSRFNSLRTPPRIP 479
++F+ D + +E+ + ++++ V+ R D Y + ++L+ P +
Sbjct: 635 SLVFLFNPKFRDTYTVENINNVSLQTTNPVI---QRQEAKIAYDMKYGKQDNLK-PDDMK 690
Query: 480 QSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELES 539
Q GR R ++G G YKG++ V D++ ++VE+ S
Sbjct: 691 QYVGRQMR------------------IIG-------GKYKGFQCTVTDIRNDQIKVEINS 725
Query: 540 QMKVVTVDRS--MISDNVVVSTPYRDTPRYGMGS 571
+ V + + + +D Y TP Y S
Sbjct: 726 KFITVFIPKCDLIATDKGQTELEYGKTPSYNAQS 759
>gi|357504733|ref|XP_003622655.1| Transcription elongation factor SPT5 [Medicago truncatula]
gi|355497670|gb|AES78873.1| Transcription elongation factor SPT5 [Medicago truncatula]
Length = 241
Score = 73.9 bits (180), Expect = 4e-10, Method: Composition-based stats.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 15/130 (11%)
Query: 194 ELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENVH 253
E + F GE+G KK F KGD V+V G+ + V+KV+E V
Sbjct: 123 EEQNFTQSGESG--------------KKQQFRKGDIVMVTDGETEGKIKVVDKVEEGYVL 168
Query: 254 IRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKE 313
IR + L + V + ++ K+F+ G+ VKVVSGT G TG V+KV+QH ++L T++
Sbjct: 169 IRA-IDHLSGSYEVQTSQIRKHFKEGDRVKVVSGTDEGETGFVVKVDQHDHLVLFTDTRK 227
Query: 314 DIRVFADDVV 323
+I V ADD V
Sbjct: 228 EICVLADDAV 237
Score = 59.7 bits (143), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 7/69 (10%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
MQKC I S ++ L +Y+EA KE+ VKEACKG++ +Y +K++ VP+ EM
Sbjct: 59 MQKC-------TIFSAFVVESLPKCVYVEAHKESDVKEACKGVQTLYCKKIIAVPMNEMN 111
Query: 61 DVLAVESKA 69
D++ + SK+
Sbjct: 112 DLMTLASKS 120
>gi|6475006|dbj|BAA87321.1| Hypothetical nuclear protein [Schizosaccharomyces pombe]
Length = 111
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 1 MQKCID---KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIR 57
M+K +D S L+I S D L YIY+EA K++HV +A G+ N+Y+ ++LVPI+
Sbjct: 21 MRKAMDLQYTSSPLEIISAFQRDSLVGYIYVEARKQSHVLDALNGVLNVYTNNMILVPIK 80
Query: 58 EMTDVLAVESKAIDLSRDTWVRMKIGNYKGD 88
EM D+L V+ + ++L +VR++ G Y GD
Sbjct: 81 EMPDLLKVQKQVVELLPGAYVRIRRGKYAGD 111
>gi|340507762|gb|EGR33676.1| transcription initiation protein spt5, putative [Ichthyophthirius
multifiliis]
Length = 681
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 12/204 (5%)
Query: 172 GFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVI 231
G++YKT + K + + P DE++KF G+ E + L + F+ GD V+
Sbjct: 278 GYVYKTFNCKDLDLK-YSPKLDEIKKFYPFGDIQEYLKDNYKNLKLADQYTKFIPGDQVL 336
Query: 232 VIKGDLKNLKGWVEKVDEENVHIRP-EMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQA 290
V G K LK V V+ + V I + K L + +K+L K F G VKV+SG
Sbjct: 337 VTNGQQKGLKAQVVAVNGDLVKIVALDKKYKDLELDLQAKDLVKNFNDGQRVKVISGNHQ 396
Query: 291 GATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSEVT--------TGITKIGDYELRD 342
G TG++LK E ++ I +D K I D+ S E+ I+ + + D
Sbjct: 397 GKTGVILKTENYICYIFTD-NKNTIECKPKDLAVSGEINIDYSQSRGNDISNNLNLKKHD 455
Query: 343 LVLLD-NNSFGVIIRVESEAFQVL 365
LV L+ NS G+++ + S+ ++L
Sbjct: 456 LVKLNGQNSVGLVLSISSDFIKIL 479
>gi|308451868|ref|XP_003088830.1| hypothetical protein CRE_20631 [Caenorhabditis remanei]
gi|308245173|gb|EFO89125.1| hypothetical protein CRE_20631 [Caenorhabditis remanei]
Length = 562
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 123/492 (25%), Positives = 182/492 (36%), Gaps = 177/492 (35%)
Query: 506 LVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRS---MISDNVVVS---- 558
++G V++ GP KGY G V D +VRVEL +Q + V+VDR+ ++ D + S
Sbjct: 82 IIGKNVRITKGPMKGYFGIVRDATEDTVRVELHAQCRTVSVDRARMMVVGDTGITSSGSG 141
Query: 559 --------TPYRD---TPRYG-----MGSETPMHPS-------RTPLHPYMTPM------ 589
TP RD TP YG G++TPM+ + RTP + MTP
Sbjct: 142 TSFYNTAKTPMRDSSKTPMYGSKTPMYGAQTPMYGAMTPHAGDRTPHYGAMTPAYGGRTP 201
Query: 590 ---------------------------------RDAGATPI--HDGMRTPMRDRAWNPYT 614
D G TP HD RTP + N T
Sbjct: 202 AYGDGSRTPAYGSKTPAYGDLDEHSSARTPAYGNDNGRTPAYGHDSGRTPAYGNSENGRT 261
Query: 615 PM---------SPPRDNWEDGNPGSWG-----------------------TSPQYQPGSP 642
P +P D+ PG TSP Y P
Sbjct: 262 PAYGGSTDSGRTPAYDHDSGRTPGYESLPSRTPNYDSSKTPSYTNDFDTPTSPTYDP--E 319
Query: 643 PSRAYE---APTPGSGWASTPGGNYSDAGTPR--------------DSSSTYVNAPSPYL 685
P+ Y A TP TPG D+G+P SS TY + P Y
Sbjct: 320 PNEPYNNAPARTPAFDSGRTPGYETYDSGSPTYDPEPTGETEDIGDTSSPTYDSPPHSYS 379
Query: 686 PSTPGG--QPMTPNSASYLPGTPGG--QPMTPGTGGLD----AMSPVIG----ADN---- 729
TPG P TP +Y TPG PMTPGTGG A SP +G A+N
Sbjct: 380 VPTPGAMINPATP--GAYHVDTPGPFVAPMTPGTGGAYDQYVAPSPYMGGGFEANNFNNA 437
Query: 730 -------------EGPWFMPDILV-------RRSGEESVV-----GVIREVLPDGSCRVV 764
+G W M ++ V R + E++V G + +PD C +
Sbjct: 438 GGAIESIPEHFLVQGHWIMSNLYVVIKEHDPRYNDREAIVQNVNDGKVDIYIPDLKCNLE 497
Query: 765 LGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSL-D 823
+ +++ P+ D +++ G G +G+++ +DG D +++ + D
Sbjct: 498 VDF-----------DQLSPTRPQPGDFARVIFGHDGGHSGQVVSMDGVDALIRSQSDISD 546
Query: 824 VKILDMAILAKL 835
++ ++ + K+
Sbjct: 547 MRSCNIGLCCKM 558
>gi|440493599|gb|ELQ76051.1| RNA polymerase II transcription elongation factor DSIF/SUPT5H/SPT5,
partial [Trachipleistophora hominis]
Length = 579
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 137/318 (43%), Gaps = 63/318 (19%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDL 72
I SVI D L Y+Y+E+ + V A + + +V +VP+ EM +V+ I L
Sbjct: 43 IYSVIIKDGLPGYVYLESFHKQSVLNAIDTCKFV-GGRVNVVPLDEMVEVMTYRKNEIVL 101
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVP 132
++VRMK G YK D+ +V+ + + V V+L+PRID ++ FVP
Sbjct: 102 F--SYVRMKKGRYKDDVGMIVEKIS-DEMVRVRLVPRID-------------GVRRLFVP 145
Query: 133 PPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTF 192
E + IRV R M ++++ + GFL + V + + P+
Sbjct: 146 --------EEHDNVIRVSRGF-VMNKEFYD-------EKGFLERNVKVSDLRLGE-SPSI 188
Query: 193 DELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKVDEENV 252
+EL F K + G+ V V KG+L+ L G ++ E +
Sbjct: 189 NELRDF---------------------KSREYEVGECVTVKKGELRTLSGRIKTKRENEL 227
Query: 253 HIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTK 312
I+ + +T V+ +++ K G+ V G + TG+V+ V+ I+ D
Sbjct: 228 VIQTDT----RTYTVSERDVQKDVRLGDEV----GVKNEGTGVVVHVQGQSAIVALDNFS 279
Query: 313 EDIRVFADDVVESSEVTT 330
++ V D++ EV T
Sbjct: 280 RELCVPVDELTRPQEVYT 297
>gi|154314435|ref|XP_001556542.1| hypothetical protein BC1G_05311 [Botryotinia fuckeliana B05.10]
Length = 459
Score = 68.6 bits (166), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 382 IKCKLEKKSNV--QDRNKNTVAVKDVVRIVEGPCKGKQGPVEHIYRGILFIHDRHHLEHA 439
I KLEK+ N DRN + ++D V+ G + + G + HI+R LF+ E+A
Sbjct: 20 ISNKLEKRRNAVATDRNGAEIKMEDTVKEFGG--EARSGRILHIHRAYLFLKSSELSENA 77
Query: 440 GFICAKSSSCVVVGGSRANGDRNGDAYSR--FNSLRTPPRIPQSPGRYSRGGPPAGGRNR 497
G A+++S V A G R + S NS+ P + +P + PP
Sbjct: 78 GIFVARTTSVQSV---SAKGGRITENASSPDLNSMN--PAMKLNPKNNGQMLPPK----- 127
Query: 498 GGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI 551
G D +G TV +R GPYKG G V D + RVEL ++ KV++V + +
Sbjct: 128 --SFGRDKSIGQTVTIRKGPYKGLLGIVKDTTDTNARVELHTKSKVISVPKDCL 179
>gi|296477821|tpg|DAA19936.1| TPA: suppressor of Ty 5 homolog [Bos taurus]
Length = 324
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 105/232 (45%), Gaps = 34/232 (14%)
Query: 608 RAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRA---------YEAPTPGSGWAS 658
A NP TP P +P S +PQY P +P + A Y AP+P +
Sbjct: 106 EASNPQTPGYP--------DPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQP 157
Query: 659 TPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGT--- 715
+P P + ++P+ Y P+ PM AS P G PMTPG
Sbjct: 158 SPSPQSYHQVAPSPAGYQNTHSPASYHPTP---SPMA-YQASPSPSPVGYSPMTPGAPSP 213
Query: 716 GGLDAMSPVIGAD-NEGPWFMPDILVRRSG---EESVVG---VIREVLPDGSCRVVLGSS 768
GG + +P G + N W DI V+ + VVG VIR V G C V L S
Sbjct: 214 GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVT-GGMCSVYLKDS 272
Query: 769 GNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDV 820
+I++ +E + P K +K+K++ G R ATG L+ +DG DGIV++D+
Sbjct: 273 EKVVSISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDL 322
>gi|70922074|ref|XP_734261.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56506837|emb|CAH77630.1| hypothetical protein PC000393.02.0 [Plasmodium chabaudi chabaudi]
Length = 214
Score = 67.8 bits (164), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 103/210 (49%), Gaps = 14/210 (6%)
Query: 224 FMKGDAVIVIKGDLKNLKGWVEKVDEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVK 283
F KG+ V ++KG+L NL G + +++ + + P+ L K ++ KYF G++V
Sbjct: 5 FKKGERVKIMKGELFNLIGTITNINDSVLSVNPD--NLAKEFKFLPSDVTKYFTEGDNVT 62
Query: 284 VVSGTQAGATGMV--LKVEQHVLIILSDTTKEDIRVFADDV---VESSEVTT----GITK 334
V++G G +G++ L ++++ +I S + + R D+ + SS T G+
Sbjct: 63 VINGLHKGKSGLISLLDYKENIALIFSPSLNTEFRSSIQDLTGTISSSSNTVEGLGGVNT 122
Query: 335 IGDYELRDLVLLDNNSFGVIIRVESEAFQVLKGVPDRPEVALVKLREIKCKLEKKSNV-Q 393
+ + + DL+ L++ GV+ ++ + ++ + + ++ + I K + +
Sbjct: 123 LNGFSIGDLIELNDRQIGVLTYIDKN--KHIRVLTNSNKILHTTIGSITYKRSAIGQICK 180
Query: 394 DRNKNTVAVKDVVRIVEGPCKGKQGPVEHI 423
D N N + KD +++ +G K K V +I
Sbjct: 181 DENGNIIQSKDTIQLTKGAHKNKTAIVSYI 210
>gi|429964542|gb|ELA46540.1| hypothetical protein VCUG_01973 [Vavraia culicis 'floridensis']
Length = 636
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/320 (25%), Positives = 137/320 (42%), Gaps = 73/320 (22%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDL 72
I SV+ D L Y+Y+E+ + V A + + S++V +VP+ EM +VL I L
Sbjct: 112 IFSVVIKDGLPGYVYLESFYKQSVLNAIDTCKFV-SKRVNVVPLDEMVEVLTYRKNEIVL 170
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKKKPFVP 132
++VR+K G YK D+ +V + + V VKL+PRID +K FVP
Sbjct: 171 F--SYVRVKKGRYKDDIGMIVGKIS-DEMVRVKLVPRID-------------GVRKLFVP 214
Query: 133 PPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKD-----GFLYKTVSMKSISAQN 187
E E I++ N G M K+ GFL + V + +
Sbjct: 215 --------EDYENVIKI-------------NNGFMFSKEFYNEKGFLERNVRVSDLRLGE 253
Query: 188 IQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKV 247
P+ EL+ F K + G++V+V KG+L+ LKG ++
Sbjct: 254 -NPSVSELKDF---------------------KDKEYEIGESVMVKKGELRTLKGTIKTK 291
Query: 248 DEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIIL 307
E + I+ + +T V+ +++ K G+ V G + TG+V+ V+ I+
Sbjct: 292 RENELVIQTD----SRTYTVSERDVQKNVGLGDEV----GVKNEGTGVVVHVQGQNAIVA 343
Query: 308 SDTTKEDIRVFADDVVESSE 327
D ++ V D++ E
Sbjct: 344 LDNFSREVSVPIDELTRPQE 363
Score = 46.6 bits (109), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 124/336 (36%), Gaps = 82/336 (24%)
Query: 500 RGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVST 559
R D L+ V V G YKG+ G V DV +V V+L S +K V V +S I ++
Sbjct: 375 RARRDPLMNNKVTVIRGCYKGFDGVVKDVHRDNVLVQLVSNLKRVEVKKSEI---MLTED 431
Query: 560 PYRDTPRYG-MGSETPMHPSRTPLHPYMTPMRDAGATPIHDGM--RTPMRDRAWNPYTPM 616
+R+ P MG+ RTP+ P+ G TP G +TP Y
Sbjct: 432 RWREGPSVSDMGA-------RTPV-----PIAFGGKTPDLSGAGGKTP----GLELYASH 475
Query: 617 SPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST 676
PR DGN P PSR +P
Sbjct: 476 GTPR---PDGNMSYRTPRGARTPYRTPSRGGHSP-------------------------- 506
Query: 677 YVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMP 736
P TPG TP+ + +P P P T +A +P + G
Sbjct: 507 ---------PRTPGIGSRTPHRE--MHKSPYKTPRAPETVEEEASAPQSVSAYRGTQ--- 552
Query: 737 DILVRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMG 796
L ++ + +I E + + ++ LG + E V P K D++ ++
Sbjct: 553 --LQYQNKLVEALDIIDETVITSTSKIKLG-------------QCEFVRPSKYDRVIVLR 597
Query: 797 GPHRGATGKLIGVDGTDGIVKVDVS--LDVKILDMA 830
G HRG++G L+ + G V+ S + V + D++
Sbjct: 598 GGHRGSSGILVRISDNKGTVRCAESGAISVNVEDIS 633
>gi|300121151|emb|CBK21532.2| unnamed protein product [Blastocystis hominis]
Length = 361
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 26 IYIEADKEAHVKEACKGLRNIYSQK---VMLVPIREMTDVLAVESKAIDLSRDTWVRMKI 82
IYIEA E V++ G+ S + L+PI E T ++ + + +VR+
Sbjct: 42 IYIEAFDETMVRKVVSGMNVFLSARRNAFQLIPITERTKLIDNPRPNKPIPLNAFVRVGK 101
Query: 83 GNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQAL-ANKLEGREVAKKKPFVPPPRFMNVDE 141
G Y+GDL +VV + ++V +KL+PRID+ V + P RF
Sbjct: 102 GLYRGDLGQVVRRMDDTEQVVLKLVPRIDMSEFEGGSYSAASVRPEAKLFDPSRFP---- 157
Query: 142 ARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTP 201
RV RR G F G ++DG L+K +MK + +++ T +E+++ ++
Sbjct: 158 ----EGRVSRRNIAKFGGLFFEYKGNYYRDGLLFKEFAMKDVKKEDVNATEEEMKEIKSV 213
Query: 202 GENG 205
N
Sbjct: 214 RTNS 217
>gi|47196177|emb|CAF88423.1| unnamed protein product [Tetraodon nigroviridis]
Length = 143
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 78/155 (50%), Gaps = 22/155 (14%)
Query: 686 PSTPGGQPMTPNSASYLPGTPGG-QPMTPGTGGLDAMSPVIGADNEGPWFMPDILVRRSG 744
PS G PMTP + S PGG P TPG+ S W DILVR
Sbjct: 5 PSPVGYSPMTPGAPS-----PGGYNPHTPGSNIEQGSSD---------WVTTDILVRVKD 50
Query: 745 E----ESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHR 800
+GVIR V G C V + S +I++ + +E V P K +K+K++ G R
Sbjct: 51 SFMDLMGQMGVIRSVT-GGMCSVFMQESEKVVSISS--DHLEPVTPTKNNKVKVIMGEDR 107
Query: 801 GATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKL 835
ATG L+ +DG DGIV++++ +KIL++ L +L
Sbjct: 108 EATGILLSIDGDDGIVRMELDDQLKILNLRFLGRL 142
>gi|432105213|gb|ELK31569.1| Transcription elongation factor SPT5 [Myotis davidii]
Length = 279
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 32/233 (13%)
Query: 627 NPGSWGTSPQYQPGSPPSRA---------YEAPTPGSGWASTPGGNYSDAGTPRDSSSTY 677
+P S +PQY P +P + A Y +P+P + +P +P +
Sbjct: 56 DPSSPQVNPQYNPQTPGTPAMYNTDQFFPYASPSPQGTYQPSPSPQSYHQVSPSPAGYQN 115
Query: 678 VNAPSPYLPSTPGGQPM------TPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGAD-NE 730
++P+ Y P+ PM +P+ Y P TPG P GG + P G + N
Sbjct: 116 THSPASYHPTP---SPMAYQARPSPSPVGYSPMTPGA----PSPGGYNPHRPGSGIEQNF 168
Query: 731 GPWFMPDILVR------RSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNEIEIV 784
W DI V+ + + GVI V+ G C V ++ +E +
Sbjct: 169 SDWVTTDIQVKVRDTYLDTQVVGLTGVICSVM-GGMCSVY--PKDREKVVSIFSEHLEPI 225
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAKLAQ 837
P K +K+K++ G R A G L+ ++G DGI+ +D+ KIL++ L KL +
Sbjct: 226 TPTKNNKVKVILGEDREAKGVLLSINGEDGIIHMDLDEQFKILNLRFLGKLLE 278
>gi|296086749|emb|CBI32898.3| unnamed protein product [Vitis vinifera]
Length = 251
Score = 63.9 bits (154), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 8 GSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVES 67
G++LQI SV +DH+K IYIEADK+ + EACKGL IY+ +V VP E+T + +
Sbjct: 78 GTKLQIISVFLVDHVKGCIYIEADKQCDINEACKGLCTIYTSRVAPVPKNEVTKFIKYDK 137
Query: 68 K 68
K
Sbjct: 138 K 138
>gi|387594751|gb|EIJ89775.1| hypothetical protein NEQG_00545 [Nematocida parisii ERTm3]
gi|387596401|gb|EIJ94022.1| hypothetical protein NEPG_00687 [Nematocida parisii ERTm1]
Length = 552
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 143/319 (44%), Gaps = 46/319 (14%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAV-ES 67
++L I + + + +K YIY+EA ++ V +A G+ + + +P +EM DVL + E
Sbjct: 137 NKLNITAALTNELVKGYIYVEAYQKQQVLQAIDGIFGAFKTNITQIPNKEMADVLYIPEL 196
Query: 68 KAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAKK 127
+ ++R+ G + G++AK+ + + ++ V L+P+I+ K
Sbjct: 197 DPVIYKEGNYLRVVKGVHSGEIAKIDSLGTGKDKIMVMLVPKIN-------------HKH 243
Query: 128 KPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQN 187
K F P N E ++ + M +KDG L K + + ++A
Sbjct: 244 KLF--NPNDFNKSEIYKMSKSTWVYKKEM------------YKDGHLLKGLPISYLAAT- 288
Query: 188 IQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKGDLKNLKGWVEKV 247
E +K+ EN + IA + F+K + V ++ G LK G V V
Sbjct: 289 -PAVTKEEKKWFDTAENKK--IAGV----------LFVKDEVVEIVYGGLKGAIGKVLSV 335
Query: 248 DEENVHIRPEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIIL 307
EE+ I+ K + +L+ E+ K + G+ V VVSG + G G ++ +E + L+I
Sbjct: 336 GEEDALIKIGDKKIKVSLS----EIRKKYAIGDEVLVVSGRKRGKCGFIVGIEGNKLMIG 391
Query: 308 SDTTKEDIRVFADDVVESS 326
+ ++I ++V SS
Sbjct: 392 INNFTDEIEAEIEEVKLSS 410
>gi|432105210|gb|ELK31566.1| Transcription elongation factor SPT5 [Myotis davidii]
Length = 307
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 49/66 (74%), Gaps = 6/66 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 241 LQIKSVVASEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 298
Query: 67 SKAIDL 72
+ +L
Sbjct: 299 KEVANL 304
>gi|70933389|ref|XP_738075.1| trancription factor [Plasmodium chabaudi chabaudi]
gi|56513993|emb|CAH74940.1| trancription factor, putative [Plasmodium chabaudi chabaudi]
Length = 358
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAV- 65
+ S+ I+ + D LK YIYIEAD +K G + I + +VP++E+T + A+
Sbjct: 144 QSSDFNIKGIYVSDDLKGYIYIEADSLYMLKRFLLGFKFINLNDISIVPVQELTSIFAMS 203
Query: 66 ESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI 110
SK + + +VR+K G Y D+ ++ +V V+LIPRI
Sbjct: 204 HSKVVIPKVNEYVRIKRGVYANDIGQIFEVHEKGIYAIVRLIPRI 248
>gi|270346534|pdb|3H7H|B Chain B, Crystal Structure Of The Human Transcription Elongation
Factor Dsif, Hspt4HSPT5 (176-273)
Length = 106
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 49/66 (74%), Gaps = 6/66 (9%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNI----YSQKVMLVPIREMTDVLAVE 66
LQI+SV+A +H+K YIY+EA K+ HVK+A +G+ N+ ++Q+ +VPI+EMTDVL V
Sbjct: 39 LQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQ--MVPIKEMTDVLKVV 96
Query: 67 SKAIDL 72
+ +L
Sbjct: 97 KEVANL 102
>gi|780365|gb|AAB05843.1| ORF, partial [Rattus norvegicus]
Length = 134
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 522 RGRVVDVKGQSVRVELESQMKVVTVDRSMISD----------NVVVSTPY--RDTPRYGM 569
RG V D + RVEL S + ++VDR ++ + TP TP YG
Sbjct: 1 RGVVKDATESTARVELHSTCQTISVDRQRLTTVDSQRPGGMTSTYGRTPMYGSQTPMYGS 60
Query: 570 GSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWE 624
GS TPM+ S+TPL TP+HDG RTP + W+P P +P R E
Sbjct: 61 GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGGWDPNNPNTPSRAEEE 115
>gi|307213972|gb|EFN89195.1| Transcription elongation factor SPT5 [Harpegnathos saltator]
Length = 275
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 65/144 (45%), Gaps = 18/144 (12%)
Query: 518 YKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVST------PYRDTPRYGMGS 571
YKG V D VRVEL S + +V+RS I+ NV V T Y TP Y G
Sbjct: 73 YKGDISIVKDATETIVRVELYSICQTTSVNRSHIA-NVGVPTKDGRFSSYNRTPAYVAGG 131
Query: 572 ETPMHP---SRTPLHPYMTPMRDAGA--------TPIHDGMRTPMRDRAWNPYTPMSPPR 620
+ M+ S+TP H TPM + G+ T H+G+R P W+P P R
Sbjct: 132 QMSMYARDRSKTPTHGSQTPMYENGSRTPHYGLMTLSHNGLRIPGHSGVWDPAVINIPAR 191
Query: 621 DNWEDGNPGSWGTSPQYQPGSPPS 644
N DG SP Y PG PP+
Sbjct: 192 TNDSDGYSMEECDSPGYAPGYPPT 215
>gi|357489405|ref|XP_003614990.1| hypothetical protein MTR_5g062110 [Medicago truncatula]
gi|355516325|gb|AES97948.1| hypothetical protein MTR_5g062110 [Medicago truncatula]
Length = 325
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 149 VERRRDPMTGDYFENIGGMLFKDGFLYKTVSMKSISAQNIQPTFDELEKFRTPGENGES- 207
++ + D TG F + GML KDGFLYK VS+ S++ ++ PT +EL KF P +N ES
Sbjct: 27 IQIKHDRETGKVFHVLDGMLLKDGFLYKKVSLDSLNFWDVVPTEEELLKF-GPSKNSESN 85
Query: 208 DIASLSTLFANRKK 221
D+ LS ++ + KK
Sbjct: 86 DMEWLSNIYGDSKK 99
>gi|296110023|ref|YP_003616972.1| NusG antitermination factor [methanocaldococcus infernus ME]
gi|295434837|gb|ADG14008.1| NusG antitermination factor [Methanocaldococcus infernus ME]
Length = 146
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 57/97 (58%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L + S++A D LK YI++EAD E +K KG+ + ++P+ E+ +L+ +
Sbjct: 28 LNVSSILASDQLKGYIFVEADNEEELKTLIKGVPKVKGYVRGVIPLEEIEPLLSPKKIVE 87
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
++ + V + G +KG+ AKV+ VD ++ +T++LI
Sbjct: 88 EIEKGDVVEIVAGPFKGERAKVIRVDKNKEEITLELI 124
>gi|323449540|gb|EGB05427.1| hypothetical protein AURANDRAFT_72223 [Aureococcus anophagefferens]
Length = 1143
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 22 LKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDLSRDT----- 76
L+ +IY+E+ E + A KGLR + + +VP M D++AV S +D S +
Sbjct: 625 LRGFIYVESRSEPAARAAVKGLRLLRGWSMKMVP---MGDMVAVVSTDLDTSGGSSKRRY 681
Query: 77 -----WVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALAN 117
W R+ Y+GDL ++V + + + LIPR+D+ AN
Sbjct: 682 NKVGDWARVSRDKYRGDLCRIVALGDGGSSAVIMLIPRVDISNRAN 727
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 117/318 (36%), Gaps = 68/318 (21%)
Query: 365 LKGVPDRPEVALVKLREIKCKLEKKS--NVQ-DRNKNTVAVKDVVRIVEGPCKGKQGPVE 421
L+ + R E+ +V+ EI KL ++S NV D V D V + +G G V
Sbjct: 736 LEILTSRGELRVVRPAEIARKLNQESARNVSLDSKDEHVRETDHVILDDGSDVGNIATVV 795
Query: 422 HIYRGILFI----HDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSRFNSLRTPPR 477
+R L++ G I K+ V V G+R +G+ D Y R
Sbjct: 796 RAHRASLWLLKTASGAASAPRGGLIVRKARE-VHVAGNRTSGNALADTYMGLGKQRIV-- 852
Query: 478 IPQSPGRYSRGGPPAGGRNRGGRGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVEL 537
+ +++ G GR RG G D +G TV++ G YKG G V V VEL
Sbjct: 853 ---NEDQFNDKGDSGRGRGRGAPGMRDPFLGRTVRICKGNYKGLAGIVTTATSSHVTVEL 909
Query: 538 ESQMKVVTVDRSMIS------------------------DNVVVSTPYRD---------T 564
++ + VT R + + +VSTP+ T
Sbjct: 910 HTRNRSVTQLRECVKLVTGAAGGEPELAVQRRVAEQEAYNADLVSTPFLTQATPLLGGAT 969
Query: 565 PRYG-----------------MGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMR- 606
P+YG G TP H ++TP + TP ATP H G TP
Sbjct: 970 PQYGAATPRHTTPSRGNATPTWGGATPAHGAQTPHYGSQTPGY-GNATPSHGGTMTPSHY 1028
Query: 607 ---DRAWNPYTPMSPPRD 621
D W P SP +
Sbjct: 1029 GGLDDVWRPRVVASPSHN 1046
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 83/187 (44%), Gaps = 36/187 (19%)
Query: 667 AGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPG----TPG-GQPMTPG-TGGLDA 720
A TPR ++ + NA + +TP TP+ S PG TP G MTP GGLD
Sbjct: 974 AATPRHTTPSRGNATPTWGGATPAHGAQTPHYGSQTPGYGNATPSHGGTMTPSHYGGLDD 1033
Query: 721 MSPVIGADNEGPWFMPDILVRRSGEESVVGVIREVLPDGSCRVVLGSSGNGDTITALPNE 780
+ + P ++ S S L DG V N T+ AL N
Sbjct: 1034 V------------WRPRVVASPSHNIST----EAELDDGEVCKVTNIHNNMATV-ALKNS 1076
Query: 781 -----------IEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDM 829
+ + P+ +K++++ G + +L+ ++ +DGI+K+D + + KI+D
Sbjct: 1077 PAMTRTLPVSALHRIAPKAGNKVRVVDGSN-VYDAELLSIEESDGIIKLD-NGEYKIIDF 1134
Query: 830 AILAKLA 836
+ +AK+A
Sbjct: 1135 SAIAKIA 1141
>gi|159164269|pdb|2DO3|A Chain A, Solution Structure Of The Third Kow Motif Of Transcription
Elongation Factor Spt5
Length = 69
Score = 54.3 bits (129), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 42/59 (71%)
Query: 269 SKELCKYFEPGNHVKVVSGTQAGATGMVLKVEQHVLIILSDTTKEDIRVFADDVVESSE 327
++EL KYF+ G+HVKV++G G TG++++VE++ +I+ SD T +++V D+ SE
Sbjct: 11 AQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSE 69
>gi|296088798|emb|CBI38248.3| unnamed protein product [Vitis vinifera]
Length = 146
Score = 53.9 bits (128), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/40 (60%), Positives = 31/40 (77%)
Query: 80 MKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKL 119
MK G YKGDLA++V V + +++ VKLIPRIDLQA+A K
Sbjct: 1 MKNGKYKGDLAQIVVVSDAQKKAIVKLIPRIDLQAMAEKF 40
>gi|409074683|gb|EKM75075.1| hypothetical protein AGABI1DRAFT_132613 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 716
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 128/305 (41%), Gaps = 19/305 (6%)
Query: 2 QKCIDKGSELQI--RSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREM 59
Q+C+ I RS+ A L IY+EA + A V C+G+ + + + E
Sbjct: 137 QRCLQGMYAHSIPPRSIFAPIGLIGRIYVEAKRLADVYTLCRGMLGVRWWEGRKIDNIEA 196
Query: 60 TDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID-LQALANK 118
+L + + WVR++ Y D+A + +V + R+ V ++PRI L +++
Sbjct: 197 MRLLQRPMPSFKPEENGWVRLRKKPYTRDVAVIREVLP-QGRLQVVVVPRIHPLPETSSQ 255
Query: 119 LEGREVAKK-KPFVPPPRFMNVDEARELHIRVERRRDPMTGDY--FENIGGMLFKDGFLY 175
+G K+ KP P F + E R R TG + + + G+L
Sbjct: 256 NQGPAAKKRPKPSAQPVDFPALIELG------SRLRIEGTGPFTIYRYRRRVFDSSGYLL 309
Query: 176 KTVSMKSISAQNIQPTFDELEKFRTPGENGESDIASLSTLFANRKKGHFMKGDAVIVIKG 235
T+ + PT +++ F + I+ F + GD V+++
Sbjct: 310 LTLKADEYDHVEVTPTVAQVKLF---ANSASIPISVKLKAFRCAEGRQLHIGDEVVIVAS 366
Query: 236 DLKNLKGWVEKVDEENVHIR---PEMKGLPKTLAVNSKELCKYFEPGNHVKVVSGTQAGA 292
+ G VE V + +V+IR P L + + + ++F+ G+ V+V +G+ AGA
Sbjct: 367 EHAGRVGEVEAVLDTHVYIRLSDPSDSNLYENIQIPHDLARRHFKIGDDVRVKAGSYAGA 426
Query: 293 TGMVL 297
+ L
Sbjct: 427 EHLKL 431
>gi|365989502|ref|XP_003671581.1| hypothetical protein NDAI_0H01640 [Naumovozyma dairenensis CBS 421]
gi|343770354|emb|CCD26338.1| hypothetical protein NDAI_0H01640 [Naumovozyma dairenensis CBS 421]
Length = 554
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 24/202 (11%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
+Q +D G E I S+ +IE + +K + L IY+ KV L I ++
Sbjct: 52 LQFEVDDGKE--IFSMFLRKTYSGKFFIECKENTDMKSIWETLPEIYATKVTLKAITSLS 109
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLE 120
+L E L + +V +K G Y GD+A + ++ +Q+V +K++PRID + ++L
Sbjct: 110 VLLDPEYF---LLKGDYVFIKEGFYAGDIAVIDEILQDKQKVLLKVVPRIDYKNTCSELL 166
Query: 121 GREVAKKKPFVPPPRFMNVDEARELHIRVERRRDPMTGDYFEN----IGGMLFKDGFLYK 176
E P R N +A + DP + N G +++DG+L +
Sbjct: 167 LNE-------RPIRRLFNHGKA--------SKYDPNKIEKITNKRFLFRGKMYRDGYLIQ 211
Query: 177 TVSMKSISAQNIQPTFDELEKF 198
T + + N+ PT ++++ F
Sbjct: 212 TYDILELQVDNVLPTSEDIKFF 233
>gi|207342468|gb|EDZ70226.1| YML010Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 406
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 25/207 (12%)
Query: 353 VIIRVESEAFQVLKGVPDRPEVALVK----LREIKCKLEKKSNVQDRNKNTVAVKDVVRI 408
II+ + F+V + + +V+ + L +I + S+V D N N + + D I
Sbjct: 1 CIIQAGHDIFKV---IDETGKVSTITKGSILSKINTARARVSSV-DANGNEIKIGDT--I 54
Query: 409 VEGPCKGKQGPVEHIYRGILFIHDRHHLEHAGFICAKSSSCVVVGGSRANGDRNGDAYSR 468
VE ++G V +I +F+ + +E+AG S+ V S+ N N S+
Sbjct: 55 VEKVGSRREGQVLYIQTQQIFVVSKKIVENAGVFVVNPSNVEAV-ASKDNMLSNKMDLSK 113
Query: 469 FNSLRTPPRIPQSPGRYSRGGPPAGGRNR---GGRGGHDALVGTTVKVRLGPYKGYRGRV 525
N P I S+ GPP+ + RGG + +G TV++R YKG G V
Sbjct: 114 MN-----PEI------ISKMGPPSSKTFQQPIQSRGGREVALGKTVRIRSAGYKGQLGIV 162
Query: 526 VDVKGQSVRVELESQMKVVTVDRSMIS 552
DV G VEL S+ K +T+D+ ++
Sbjct: 163 KDVNGDKATVELHSKNKHITIDKHKLT 189
>gi|21280517|gb|AAM45151.1|AF395110_1 RNA polymerase II largest subunit [Naegleria gruberi]
Length = 1590
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 587 TPMRDAG-ATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDG--NPGSWGTSPQYQPGSPP 643
TP +G ATP H G+ TP A +P W G P SP+YQ G P
Sbjct: 1460 TPYHTSGLATPYHGGVATPYHGGASSP----------WTQGAMTPLGRTPSPEYQGGFSP 1509
Query: 644 SRAYEAPTPGSGWASTPG--GNYSDA--GTPRDSSSTYVNAPSPYLPSTPGGQPMTPN-- 697
S A +P + ++PG G YS + G +S Y + Y P++P P +PN
Sbjct: 1510 SPYNSAFSPVASSPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYS 1569
Query: 698 --SASYLPGTPGGQPMTPG 714
S +Y P +P P +P
Sbjct: 1570 PTSPAYSPTSPNYSPTSPA 1588
>gi|170290957|ref|YP_001737773.1| NusG antitermination factor [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170175037|gb|ACB08090.1| NusG antitermination factor [Candidatus Korarchaeum cryptofilum
OPF8]
Length = 159
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 12 QIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAID 71
++RS+I + KNY+++EA++E V++ GL + VP +E+ D+L+ E+ ++
Sbjct: 35 KVRSIIFVPKFKNYLFVEAEREYEVRKLIAGLSKLRLASSSPVPPQEIEDILSSETAGME 94
Query: 72 LSRDTWVRMKIGNYKGDLAKVVDV-DNVRQRVTVKLI 107
+ V++ GN+KG A V+ + + +T+KL+
Sbjct: 95 IEPGDIVKIIKGNFKGYRAVVIATPEGKSKMLTLKLL 131
>gi|409073658|gb|EKM74202.1| hypothetical protein AGABI1DRAFT_133512 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 440
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 14 RSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVM-LVPIREMTDVLAVESKAIDL 72
+S+ + L I+ E++ V+ CKG++ I K+ LV + + L +
Sbjct: 200 KSIFSRISLPGRIFFESNSLNSVRLLCKGIKGINLNKIAKLVDPTQWVEYLTMPHAGYVP 259
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRID 111
DTWVRMK G +KGD+A V VD R + IPRID
Sbjct: 260 KTDTWVRMKKGIHKGDIAFVGLVDPHSLRAVLLYIPRID 298
>gi|149056474|gb|EDM07905.1| suppressor of Ty 5 homolog (S. cerevisiae), isoform CRA_c [Rattus
norvegicus]
Length = 78
Score = 50.1 bits (118), Expect = 0.005, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 761 CRVVLGSSGNGDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDV 820
C V L S +I++ +E + P K +K+K++ G R ATG L+ +DG DGI+++D+
Sbjct: 2 CSVYLKDSEKVVSISS--EHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIIRMDL 59
Query: 821 S-LDVKILDMAILAKLAQ 837
+KIL++ L KL +
Sbjct: 60 EDQQIKILNLRFLGKLLE 77
>gi|159467413|ref|XP_001691886.1| DNA-directed RNA polymerase II, largest subunit [Chlamydomonas
reinhardtii]
gi|158278613|gb|EDP04376.1| DNA-directed RNA polymerase II, largest subunit [Chlamydomonas
reinhardtii]
Length = 1789
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 69/161 (42%), Gaps = 16/161 (9%)
Query: 559 TPYRDTP-RYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMS 617
TP R TP R + PM PS L P +P +G +P+H G +P PMS
Sbjct: 1491 TPGRMTPSRSPARTPGPMSPSHL-LSPMHSPFVGSGFSPMHPGAFSPAHGGGVG--GPMS 1547
Query: 618 PPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTY 677
P + +PG TSP+Y P SP AY +P S S A +P +S Y
Sbjct: 1548 P---GYSPTSPGYSPTSPRYSPTSP---AYSPTSPAYSPTSPAYSPTSPAYSP--TSPAY 1599
Query: 678 VNAPSPYLPSTPGGQP----MTPNSASYLPGTPGGQPMTPG 714
Y P++P P +P S +Y P +P P +P
Sbjct: 1600 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1640
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 66/160 (41%), Gaps = 12/160 (7%)
Query: 564 TPRYGMGSETPMHPSRTPLHPYMTPM--RDAGATPIHDGMRTPMR--DRAWNPYTP-MSP 618
+P +G G PM P +P P +P R + +P + A++P +P SP
Sbjct: 1535 SPAHGGGVGGPMSPGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1594
Query: 619 PRDNWEDGNPGSWGTSPQYQPGSPP----SRAYEAPTPGSGWASTPGGNYSDAGTPRDSS 674
+ +P TSP Y P SP S AY +P S S A +P +S
Sbjct: 1595 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP--TS 1652
Query: 675 STYVNAPSPYLPS-TPGGQPMTPNSASYLPGTPGGQPMTP 713
Y A SP P +P M+P S Y P +P P +P
Sbjct: 1653 PAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSP 1692
>gi|432105212|gb|ELK31568.1| Transcription elongation factor SPT5 [Myotis davidii]
Length = 121
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 504 DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS----------- 552
+ L+G TV++ G KGY G V D + +VEL S + ++VDR ++
Sbjct: 31 NELIGQTVRISQGGDKGYIGVVKDATESTAQVELHSTCQTISVDRQWLTTVGSRHPGGMN 90
Query: 553 DNVVVSTPY-RDTPRYGMGSETPMHPSRTPL 582
+T Y TP YG GS TPM+ S+TP
Sbjct: 91 STYGRTTMYGSQTPMYGSGSCTPMYGSQTPC 121
>gi|118431766|ref|NP_148437.2| transcription antitermination protein NusG [Aeropyrum pernix K1]
gi|152031650|sp|Q9Y9W3.2|NUSG_AERPE RecName: Full=Putative transcription antitermination protein NusG
gi|116063088|dbj|BAA81187.2| putative transcription antitermination protein NusG [Aeropyrum
pernix K1]
Length = 151
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L IRS+I +K Y+ +EA V +A +GLR++ ++ +++ E+ ++ E +
Sbjct: 35 LDIRSIIVPPRIKGYVILEAHDPGDVYDATRGLRHVKRRRPLILKFEEVMKLVKPEVEIP 94
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
L V + G +KG A+V+DV+ + +VTV L+
Sbjct: 95 ALKPGQVVEIVAGAFKGMKARVIDVNQSKGQVTVSLL 131
>gi|290983563|ref|XP_002674498.1| RNA polymerase II [Naegleria gruberi]
gi|284088088|gb|EFC41754.1| RNA polymerase II [Naegleria gruberi]
Length = 1757
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 15/142 (10%)
Query: 587 TPMRDAG-ATPIHDGMRTPMRDRAWNPYT--PMSPPRDNWEDGNPGSWGTSPQYQPGSPP 643
TP +G ATP H G+ TP A +P+T M+P G + SP SP
Sbjct: 1503 TPYHTSGLATPYHGGVATPYHGGASSPWTQGAMTPLGRTPSPEYQGGFSPSPYNSAFSPV 1562
Query: 644 SRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP--------YLPSTPGGQPMT 695
+ + +P G++ + GNYS SS + SP Y P++P P +
Sbjct: 1563 ASSPTSPGHQGGYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTS 1622
Query: 696 PN----SASYLPGTPGGQPMTP 713
PN S +Y P +P P +P
Sbjct: 1623 PNYSPTSPAYSPTSPAYSPTSP 1644
>gi|326431524|gb|EGD77094.1| polymerase II polypeptide A [Salpingoeca sp. ATCC 50818]
Length = 1834
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 65/148 (43%), Gaps = 27/148 (18%)
Query: 568 GMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGN 627
G G+ TP +RTP H +P G TPI G TP D A++ +SP R D +
Sbjct: 1516 GEGAATPWTSARTPAHFAASPSIVGGQTPIM-GQFTP--DHAFD--GTLSPGRSPVAD-S 1569
Query: 628 PGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP-YLP 686
PG SP Y P SP Y +PG +P +DA A SP Y P
Sbjct: 1570 PGFGAMSPSYNPASP---RYAPQSPG----YSPTSPRADA------------AASPMYSP 1610
Query: 687 STPGGQPMTPNSASYLPGTPGGQPMTPG 714
++PG P +P P +P P +PG
Sbjct: 1611 TSPGYSPTSPKPGQS-PTSPSYSPTSPG 1637
>gi|12642610|gb|AAK00309.1|AF315819_1 DNA-dependent RNA polymerase II largest subunit RPB1 [Botryocladia
uvarioides]
Length = 1712
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 72/189 (38%), Gaps = 33/189 (17%)
Query: 577 PSRTPLHPYMTPMRDAGA-TPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDG--------- 626
P ++P YM PM GA +P A +P P SP N G
Sbjct: 1520 PLQSPRGDYMPPMSPGGAASPYVSASPGRASPYATSPAYPQSPGSYNAGSGFAPASPAYK 1579
Query: 627 ----NPGSWG----------------TSPQYQPGSPPSRAYEAP-TPGSGWASTPGGNYS 665
PG +G TSP + P SP + P PG+G S G +Y+
Sbjct: 1580 VTSPAPGGYGGAYQSPARSPGAQYSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYN 1639
Query: 666 DAGTPRDSSSTYVNAPSP--YLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSP 723
A +P S + SP Y P++P P +P + Y P TP P G +A SP
Sbjct: 1640 AAASPGYQSGINYSPGSPHTYSPNSPVFTPRSPAAHGYSPSTPQYNPQGSNPYGQNAGSP 1699
Query: 724 VIGADNEGP 732
G N+ P
Sbjct: 1700 APGNANQSP 1708
>gi|301090036|ref|XP_002895253.1| DNA-directed RNA polymerase II largest subunit [Phytophthora
infestans T30-4]
gi|262101000|gb|EEY59052.1| DNA-directed RNA polymerase II largest subunit [Phytophthora
infestans T30-4]
Length = 1858
Score = 48.5 bits (114), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 92/229 (40%), Gaps = 31/229 (13%)
Query: 504 DALVGTTVKVRLGPYK----GYRGRVVDVKGQSVRVELES---QMKVVTVDRSMISDN-- 554
D L G + V LG G V+D K + +E E+ Q + +D S +
Sbjct: 1485 DPLTGVSENVMLGQLAPLGTGIMDLVLDAKKLANAIEYEASEIQQVMQGLDNEWRSPDQG 1544
Query: 555 --VVVSTPYRDTPRYGMGSETPMHP---SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRA 609
++TP+ TP G + +P P S +P +PM A+P G A
Sbjct: 1545 PGTPMATPFASTP--GFSASSPFSPGGGSFSPAAGAFSPM----ASPASPGFMA--ASPA 1596
Query: 610 WNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGT 669
+P +P++P + +P TSP Y P SP AY +P S S A +
Sbjct: 1597 HSPASPLNPTSPAYSPMSPAYSPTSPAYSPTSP---AYSPTSPAYSPTSPAYSPTSPAYS 1653
Query: 670 PRDSSSTYVNAPSPYLPSTPGGQP----MTPNSASYLPGTPGGQPMTPG 714
P +S Y Y P++P P +P S +Y P +P P +P
Sbjct: 1654 P--TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1700
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 17/151 (11%)
Query: 573 TPMHPSRTPLHPYMTPMRDAGA--TPIHDGMRTPMRDRAWNPYTP-MSPPRDNWEDGNPG 629
+P P+ +P P +P A + +P + A++P +P SP + +P
Sbjct: 1681 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP-----AYSPTSPAYSPTSPAYSPTSPA 1735
Query: 630 SWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPS--PYLPS 687
TSP Y P SP AY +P A +P +P S ++ +P+ Y P+
Sbjct: 1736 YSPTSPAYSPTSP---AYSPTSPAYTPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1792
Query: 688 TPGGQP----MTPNSASYLPGTPGGQPMTPG 714
+P P +P S +Y P +PG P +P
Sbjct: 1793 SPAYSPTSPAYSPTSPAYSPTSPGYSPTSPS 1823
>gi|348676924|gb|EGZ16741.1| RNA polymerase II large subunit [Phytophthora sojae]
Length = 1852
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 92/229 (40%), Gaps = 31/229 (13%)
Query: 504 DALVGTTVKVRLGPYK----GYRGRVVDVKGQSVRVELES---QMKVVTVDRSMISDN-- 554
D L G + V LG G V+D K + +E E+ Q + +D S +
Sbjct: 1485 DPLTGVSENVMLGQLAPLGTGIMDLVLDAKKLANAIEYEASEIQQVMQGLDNEWRSPDQG 1544
Query: 555 --VVVSTPYRDTPRYGMGSETPMHP---SRTPLHPYMTPMRDAGATPIHDGMRTPMRDRA 609
++TP+ TP G + +P P S +P +PM A+P G A
Sbjct: 1545 PGTPMATPFASTP--GFSASSPFSPGGGSFSPAAGAFSPM----ASPASPGFMA--ASPA 1596
Query: 610 WNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGT 669
+P +P++P + +P TSP Y P SP AY +P S S A +
Sbjct: 1597 HSPASPLNPTSPAYSPMSPAYSPTSPAYSPTSP---AYSPTSPAYSPTSPAYSPTSPAYS 1653
Query: 670 PRDSSSTYVNAPSPYLPSTPGGQP----MTPNSASYLPGTPGGQPMTPG 714
P +S Y Y P++P P +P S +Y P +P P +P
Sbjct: 1654 P--TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1700
>gi|299755292|ref|XP_001828577.2| RNA polymerase II large subunit [Coprinopsis cinerea okayama7#130]
gi|298411158|gb|EAU93247.2| RNA polymerase II large subunit [Coprinopsis cinerea okayama7#130]
Length = 1745
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 66/146 (45%), Gaps = 32/146 (21%)
Query: 573 TPMHPSRTPLHPY---MTPMRDAGAT-PIHDGMRTPMRDRAWNP-YTPMSPPRDNWEDGN 627
+P P P PY +P + AT P +D R +A +P Y+P SP +
Sbjct: 1569 SPTSPGMVPRSPYGAPTSPFSNQYATSPFYDSRR-----QATSPTYSPTSPIAGL---TS 1620
Query: 628 PGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPS 687
P TSP + P SP Y +P G ++P NYS A +PS Y P+
Sbjct: 1621 PAYSPTSPGFSPTSP--NGYSPQSPNFGSPASP--NYSPA------------SPS-YSPA 1663
Query: 688 TPGGQPMTPNSASYLPGTPGGQPMTP 713
+P G M+P S Y P +PG PM+P
Sbjct: 1664 SPAG--MSPTSPRYSPASPGASPMSP 1687
>gi|353244374|emb|CCA75777.1| hypothetical protein PIIN_09767 [Piriformospora indica DSM 11827]
Length = 513
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 500 RGGHDALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMI 551
RG D L+G +K+ G KGY+G + DV GQ RVEL + +++T+++ +
Sbjct: 22 RGPRDRLIGVNIKIIKGTQKGYQGIIKDVNGQHCRVELSTNNRIITIEKDKL 73
>gi|14520220|ref|NP_125694.1| transcription antitermination protein NusG [Pyrococcus abyssi GE5]
gi|5457435|emb|CAB48926.1| nusG transcription antitermination protein [Pyrococcus abyssi GE5]
gi|380740734|tpe|CCE69368.1| TPA: transcription antitermination protein NusG [Pyrococcus abyssi
GE5]
Length = 152
Score = 47.4 bits (111), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L I +++A +K YI+IEA +++ V EA +G+R+ +P E+ L +
Sbjct: 31 LPIYAILAPSKVKGYIFIEAPEKSVVDEAIRGIRHARGVLPREIPFSEIEHFLEEKPAVS 90
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
L V + G +KG+ AKVV VD + + V+LI
Sbjct: 91 GLEPGDIVELISGPFKGEKAKVVRVDESKDEIVVELI 127
>gi|389851507|ref|YP_006353741.1| transcription antitermination protein NusG [Pyrococcus sp. ST04]
gi|388248813|gb|AFK21666.1| transcription antitermination protein NusG [Pyrococcus sp. ST04]
Length = 152
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L I +++A +K YI+IEA ++ V EA +G+R+ +P E+ L +
Sbjct: 31 LPIYAILAPSKVKGYIFIEAPNKSAVDEAIRGIRHARGVLPGEIPFSEIEHFLEEKPAVS 90
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
L V + G +KG+ AKVV VD + + V+LI
Sbjct: 91 GLEPGDIVELISGPFKGEKAKVVRVDESKDEIVVELI 127
>gi|260796451|ref|XP_002593218.1| hypothetical protein BRAFLDRAFT_120136 [Branchiostoma floridae]
gi|229278442|gb|EEN49229.1| hypothetical protein BRAFLDRAFT_120136 [Branchiostoma floridae]
Length = 1934
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 609 AWNPYTPMSPPRDNWED-GNP---GSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNY 664
A +P MSP W+ G P G+W SP G P A +P+ S + Y
Sbjct: 1504 AGSPTASMSPQMTPWQQVGTPAYGGAW--SPGLGSGMTPGAAGFSPSAASDASGMSPAGY 1561
Query: 665 SDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPN----SASYLPGTPGGQ-PMTPG 714
S A +P S SPY+PS PGG PM+P+ S +Y+P +PGG P +PG
Sbjct: 1562 SPAWSPTPGSPGSPGPASPYIPS-PGG-PMSPSYSPASPAYMPRSPGGMTPQSPG 1614
>gi|402086759|gb|EJT81657.1| hypothetical protein GGTG_01635 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1765
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 9/145 (6%)
Query: 568 GMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMR-DRAWNP-YTPMSPPRDNWED 625
G + P PS +P P +P +G H +P + + +P Y+P+SP +
Sbjct: 1627 GFRATNPTSPSYSPTSPGYSPASPSGGGAKHYSPTSPNQFNSPTSPSYSPVSP---GYSP 1683
Query: 626 GNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWAST-PGGNYSDAGTPRDSSSTYVNAPSPY 684
+P TSP Y P SP + +P ++ T P + S A +S Y + +
Sbjct: 1684 ASPNLHATSPNYSPASP---KWSPTSPTGAYSPTSPALHRSPAQNQSPTSPGYSPSSPTF 1740
Query: 685 LPSTPGGQPMTPNSASYLPGTPGGQ 709
P TPGG+ N SY P +PG +
Sbjct: 1741 SPRTPGGRGAGGNQDSYSPTSPGHE 1765
>gi|397472018|ref|XP_003807558.1| PREDICTED: uncharacterized protein LOC100968526 [Pan paniscus]
Length = 2602
Score = 47.4 bits (111), Expect = 0.034, Method: Composition-based stats.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 624 EDGNPGSWGTSPQYQPGSP----PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVN 679
E +PG SP+++P SP S +E+ +PG P ++ DS S
Sbjct: 2107 EPQSPGFEPQSPEFEPQSPRFEPESPGFESRSPG---LVPPSPEFAPRSPESDSQSPEFE 2163
Query: 680 APSP-YLPSTPGGQPMTPN----SASYLPGTPGGQPMTPG 714
+ SP Y P +PG +P +P S Y P +PG +P +PG
Sbjct: 2164 SQSPRYEPQSPGYEPRSPGYEPRSPGYEPRSPGYEPRSPG 2203
>gi|332158453|ref|YP_004423732.1| transcription antitermination protein NusG [Pyrococcus sp. NA2]
gi|331033916|gb|AEC51728.1| transcription antitermination protein NusG [Pyrococcus sp. NA2]
Length = 152
Score = 47.4 bits (111), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L + +++A +K YI++EA +++ V EA +G+R+ VP E+ L +
Sbjct: 31 LPVYAILAPSKVKGYIFVEAPEKSVVDEAIRGIRHARGVLPREVPFSEIEHFLEEKPAVS 90
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
L V + G +KG+ AKVV VD + + V+LI
Sbjct: 91 GLEPGDIVELISGPFKGEKAKVVRVDEAKDEIVVELI 127
>gi|408404909|ref|YP_006862892.1| transcription antitermination protein NusG [Candidatus
Nitrososphaera gargensis Ga9.2]
gi|408365505|gb|AFU59235.1| putative transcription antitermination protein NusG [Candidatus
Nitrososphaera gargensis Ga9.2]
Length = 221
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDL 72
IRSV+ LD K YI +EA EA G+R++ Q +P +++ L + +L
Sbjct: 107 IRSVMVLDSFKGYIIVEAPDSNVAYEALAGIRHVRGQIRGDLPFKDIEGYLVKKPMVSEL 166
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
+ D V + G +K AK+ VD RQ TV L+
Sbjct: 167 NVDDTVEVIAGPFKSMKAKITRVDYERQEATVVLL 201
>gi|14589965|ref|NP_142025.1| transcription antitermination protein NusG [Pyrococcus horikoshii
OT3]
gi|3256387|dbj|BAA29070.1| 155aa long hypothetical transcription termination-antitermination
factor [Pyrococcus horikoshii OT3]
Length = 155
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K L I +++A +K YI+IEA +++ V EA +G+R+ +P E+ L +
Sbjct: 30 KTYNLPIYAILAPSKVKGYIFIEAPEKSVVDEAIRGIRHARGVLPGEIPFSEIEHFLEEK 89
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
L V + G +KG+ AKVV VD + + V+LI
Sbjct: 90 PAVSGLEPGDIVELISGPFKGEKAKVVRVDESKDEIVVELI 130
>gi|375081936|ref|ZP_09729009.1| transcription antitermination protein NusG [Thermococcus litoralis
DSM 5473]
gi|374743376|gb|EHR79741.1| transcription antitermination protein NusG [Thermococcus litoralis
DSM 5473]
Length = 151
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K L IR+++A ++ YI++EA ++A V EA +G+R+ + E+ L +
Sbjct: 27 KTYNLPIRAILAPSKVRGYIFVEAAEKAAVDEAIRGIRHAKGTLPGEIAFSEIEHFLEEK 86
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
V + G +KG+ AKVV VD + + V+LI
Sbjct: 87 PAVSGFEPGDIVELIAGPFKGEKAKVVRVDEAKDEIVVELI 127
>gi|115492277|ref|XP_001210766.1| DNA-directed RNA polymerase II largest subunit [Aspergillus terreus
NIH2624]
gi|114197626|gb|EAU39326.1| DNA-directed RNA polymerase II largest subunit [Aspergillus terreus
NIH2624]
Length = 1742
Score = 46.6 bits (109), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 59/125 (47%), Gaps = 18/125 (14%)
Query: 609 AWNPYTPM----SPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPG 661
A++P +P SP ++ +PG TSP Y P SP P+ +PT S ++P
Sbjct: 1619 AYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSPTSPA 1678
Query: 662 GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPGTGGLD 719
G R+ S T +P Y P++PG P +P SY P +P GG P +PG G
Sbjct: 1679 -----LGAGRNMSPTSPTSPK-YTPTSPGWSPTSPQ--SYSPTSPNIGGSPTSPG-GAYS 1729
Query: 720 AMSPV 724
SP
Sbjct: 1730 PTSPT 1734
>gi|261403043|ref|YP_003247267.1| transcription antitermination protein NusG [Methanocaldococcus
vulcanius M7]
gi|261370036|gb|ACX72785.1| NusG antitermination factor [Methanocaldococcus vulcanius M7]
Length = 147
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESK 68
+L + S++A + LK Y+ +EA+ + V+E KG+ I + I E+ +L +
Sbjct: 26 EQLDVHSILASESLKGYVLVEAETKGDVEELIKGMPRIRGIVPGTISIEEIEPLLTPKKI 85
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKL 106
++ + V + G +KG+ AKV+ VD ++ VT++L
Sbjct: 86 IENIEKGDVVEIIAGPFKGERAKVIRVDKHKEEVTLEL 123
>gi|374636732|ref|ZP_09708286.1| NusG antitermination factor [Methanotorris formicicus Mc-S-70]
gi|373558024|gb|EHP84391.1| NusG antitermination factor [Methanotorris formicicus Mc-S-70]
Length = 146
Score = 46.2 bits (108), Expect = 0.070, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 51/97 (52%)
Query: 10 ELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKA 69
+L + S++A ++LK YI +EA+ V+E +G + + E+ +L
Sbjct: 27 KLDVYSILATENLKGYILVEAENRGVVEELVRGAFKVKGIVPGTTSVDELEHLLTPRKLV 86
Query: 70 IDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKL 106
D+ + V + G +KG+ A+V+ VD ++ +T++L
Sbjct: 87 EDIEKGDLVELVAGLFKGERARVIRVDKNKEEITIEL 123
>gi|3511287|gb|AAC62246.1| DNA-dependent RNA polymerase II largest subunit, partial [Breviata
anathema]
Length = 1690
Score = 46.2 bits (108), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 17/142 (11%)
Query: 573 TPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWG 632
+P P+ +P P +P A+P + +P A Y+P SP + +P
Sbjct: 1507 SPASPAYSPASPAYSP-----ASPAYSPA-SPAYSPASPAYSPASP---AYSPASPAYSP 1557
Query: 633 TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQ 692
SP Y P SP AY +P AS S A +P +S Y A Y P++P
Sbjct: 1558 ASPAYSPASP---AYSPASPAYSPASPAYSPASPAYSP--ASPAYSPASPAYSPASPAYS 1612
Query: 693 PMTPNSASYLPGTPGGQPMTPG 714
P +P +Y P +P P +P
Sbjct: 1613 PASP---AYSPASPAYSPASPA 1631
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 615 PMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSS 674
P SP + +P SP Y P SP AY +P AS S A +P +S
Sbjct: 1498 PGSPAAAGYSPASPAYSPASPAYSPASP---AYSPASPAYSPASPAYSPASPAYSP--AS 1552
Query: 675 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG 714
Y A Y P++P P +P +Y P +P P +P
Sbjct: 1553 PAYSPASPAYSPASPAYSPASP---AYSPASPAYSPASPA 1589
Score = 40.0 bits (92), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 564 TPRYGMGS--ETPMHPSRTPLHPYMTPMRDAG--ATPIHDGMRTPMRDRAWNPYTPMSPP 619
+P Y S +P P+ +P P +P A A+P + +P A Y+P SP
Sbjct: 1559 SPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPA-SPAYSPASPAYSPASP- 1616
Query: 620 RDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVN 679
+ +P SP Y P SP AY +P AS G S A +P +S Y
Sbjct: 1617 --AYSPASPAYSPASPAYSPASP---AYSPASPAYSPASPAYGPASPAYSP--ASPAYSP 1669
Query: 680 APSPYLPSTPGGQPMTP 696
A Y P++P P P
Sbjct: 1670 ASPAYSPASPAYDPAEP 1686
>gi|209880239|ref|XP_002141559.1| DNA-directed RNA polymerase II subunit RPB1 [Cryptosporidium muris
RN66]
gi|209557165|gb|EEA07210.1| DNA-directed RNA polymerase II subunit RPB1, putative
[Cryptosporidium muris RN66]
Length = 1927
Score = 46.2 bits (108), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 64/155 (41%), Gaps = 17/155 (10%)
Query: 573 TPMHPSRTPLHPYMTPMR-DAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW 631
+P P+ +P P +P + T H +P Y+P SP ++ +P
Sbjct: 1700 SPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSP---HYSPTSPNYS 1756
Query: 632 GTSPQYQPGSP---PSRAYEAPT-----PGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP 683
TSP Y P SP P+ + +PT P S S NYS + +S N SP
Sbjct: 1757 PTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASP 1816
Query: 684 -YLPSTPGGQPMTPN----SASYLPGTPGGQPMTP 713
Y PS+P P +PN S Y P P P +P
Sbjct: 1817 NYSPSSPHYNPASPNYSPSSPQYNPALPNYSPSSP 1851
Score = 40.4 bits (93), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPT-----PGSGWASTPGGNY 664
Y+P SP N+ +P TSP Y P SP P+ + +PT P S S NY
Sbjct: 1699 YSPTSP---NYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNY 1755
Query: 665 SDAGTPRDSSSTYVNAPSP-YLPSTPGGQPMTPN----SASYLPGTPGGQPMTPG 714
S +S + SP Y P++P P +P+ S +Y P +P P +P
Sbjct: 1756 SPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPS 1810
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 60/147 (40%), Gaps = 21/147 (14%)
Query: 564 TPRYGMGS--ETPMHPSRTPLHPYMTPMR-DAGATPIHDGMRTPMRDRAWNPYTPMSPPR 620
+P Y S +P P+ +P P+ +P + T H +P Y+P SP
Sbjct: 1738 SPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSP-- 1795
Query: 621 DNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNA 680
N+ +P TSP Y P SP Y +P AS NYS SS Y A
Sbjct: 1796 -NYSPSSPHYSPTSPSYNPASP---NYSPSSPHYNPASP---NYS------PSSPQYNPA 1842
Query: 681 PSPYLPSTPGGQPMTPNSASYLPGTPG 707
Y PS+P P +PN Y P +P
Sbjct: 1843 LPNYSPSSPQYNPTSPN---YSPSSPN 1866
>gi|346430391|emb|CCC55647.1| NusG antitermination factor [uncultured archaeon]
Length = 151
Score = 46.2 bits (108), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L++RSV+ L + Y+ +EAD V EA G++N+ S ++ I E+ VL + I
Sbjct: 35 LKVRSVLVLPKARGYLVLEADGIEDVNEAISGMKNVKSVVPGMMRIEELEPVLTRVKEEI 94
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
L V + G +KG A+VV + ++ TV L+
Sbjct: 95 KLEPGDLVEVVSGPFKGMRARVVRFEEGKKEATVNLV 131
>gi|18978362|ref|NP_579719.1| transcription antitermination protein NusG [Pyrococcus furiosus DSM
3638]
gi|397652364|ref|YP_006492945.1| transcription antitermination protein NusG [Pyrococcus furiosus
COM1]
gi|320089854|pdb|3P8B|B Chain B, X-Ray Crystal Structure Of Pyrococcus Furiosus
Transcription Elongation Factor Spt45
gi|320089856|pdb|3P8B|D Chain D, X-Ray Crystal Structure Of Pyrococcus Furiosus
Transcription Elongation Factor Spt45
gi|18894196|gb|AAL82114.1| transcription antitermination protein nusG [Pyrococcus furiosus DSM
3638]
gi|393189955|gb|AFN04653.1| transcription antitermination protein NusG [Pyrococcus furiosus
COM1]
Length = 152
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 9/122 (7%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L I +++A +K YI++EA + V EA +G+R+ VP +E+ L +
Sbjct: 31 LPIYAILAPSRVKGYIFVEAPNKGVVDEAIRGIRHARGVLPGEVPFKEIEHFLEEKPAVS 90
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI---------DLQALANKLEG 121
L V + G +KG AKVV +D + V V+ I I D L +KL+
Sbjct: 91 GLEPGDLVEVIAGPFKGQKAKVVKIDESKDEVVVQFIDAIVPIPVTIKGDYVRLISKLQK 150
Query: 122 RE 123
E
Sbjct: 151 EE 152
>gi|396481989|ref|XP_003841371.1| similar to DNA-directed RNA polymerase ii largest subunit
[Leptosphaeria maculans JN3]
gi|312217945|emb|CBX97892.1| similar to DNA-directed RNA polymerase ii largest subunit
[Leptosphaeria maculans JN3]
Length = 1875
Score = 45.8 bits (107), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 12/114 (10%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSP--PSRAYEAPTPGSGWASTPGGNYSDAGTP 670
+ MSP +PG TSP Y P SP S + A +P G+ ++P + +P
Sbjct: 1692 FATMSPGFSGTSPVSPGFSPTSPAYSPTSPGISSPQFAATSP--GYMASPTSPHYSPTSP 1749
Query: 671 RDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPV 724
R S T +PS Y P++P G +P S Y P +P P +P GG A SP
Sbjct: 1750 RYGSPT---SPS-YSPTSPAG--YSPTSPQYSPSSPNYSPTSPSFGG--ATSPA 1795
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 21/154 (13%)
Query: 573 TPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPM--SPPRDNWEDGNPGS 630
+P P+ +P P ++ + A +P + M +P ++P +P SP ++ +P
Sbjct: 1710 SPTSPAYSPTSPGISSPQFAATSPGY--MASPTSPH-YSPTSPRYGSPTSPSYSPTSPAG 1766
Query: 631 WG-TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYL---- 685
+ TSPQY P SP Y +P G A++P YS +S + SP
Sbjct: 1767 YSPTSPQYSPSSP---NYSPTSPSFGGATSPA--YSPTSPQYSPTSPQYSPTSPQYQASG 1821
Query: 686 ----PSTPGGQPMTPNSASYLPGTPGGQ--PMTP 713
P++P +P S Y P +P GQ P +P
Sbjct: 1822 DRRSPTSPTSPQYSPTSPRYSPTSPAGQFSPTSP 1855
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 62/145 (42%), Gaps = 30/145 (20%)
Query: 564 TPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNW 623
+PRYG +P PS +P P AG +P +P + Y+P SP
Sbjct: 1748 SPRYG----SPTSPSYSPTSP-------AGYSPT-----SPQYSPSSPNYSPTSPSFGGA 1791
Query: 624 EDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP 683
+P TSPQY P SP +PT AS D +P +S + SP
Sbjct: 1792 T--SPAYSPTSPQYSPTSP----QYSPTSPQYQAS------GDRRSPTSPTSPQYSPTSP 1839
Query: 684 -YLPSTPGGQPMTPNSASYLPGTPG 707
Y P++P GQ +P S Y P +PG
Sbjct: 1840 RYSPTSPAGQ-FSPTSPRYSPTSPG 1863
>gi|337285270|ref|YP_004624744.1| transcription antitermination protein NusG [Pyrococcus yayanosii
CH1]
gi|334901204|gb|AEH25472.1| transcription antitermination protein NusG [Pyrococcus yayanosii
CH1]
Length = 151
Score = 45.8 bits (107), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 51/97 (52%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L + +++A +K YI++EA ++ V EA +G+R+ +P +E+ L +
Sbjct: 31 LPLYAILAPSKVKGYIFVEAPHKSAVDEAIRGIRHARGVLPKDIPFKEIEHFLEEKPAVS 90
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
L V + G +KG+ AKVV VD + + V+LI
Sbjct: 91 GLEPGDIVELISGPFKGEKAKVVRVDEGKDEIVVELI 127
>gi|449687727|ref|XP_002164354.2| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
1, partial [Hydra magnipapillata]
Length = 1595
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 11/130 (8%)
Query: 609 AWNPYTPMSPPRDNWEDGNPGSWGT--SPQYQPGSPPSRAYEAPTPGSGWAS-TPGGNYS 665
A +P MSP W G+ +G SP G P A +P+ S + +P G +S
Sbjct: 1063 AASPSNAMSPQMTPWNQGHTPGYGDGWSPALGSGMTPGAASFSPSAHSDASGFSPAGGFS 1122
Query: 666 DAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQP----MTPGTGGLDAM 721
A +P+DS S SPY+PS P M+P SY P +P P M+P + G
Sbjct: 1123 PAWSPQDSMSLGSPDSSPYIPS-PSRNVMSP---SYSPNSPAFNPQSPAMSPSSPGYSPT 1178
Query: 722 SPVIGADNEG 731
SP+ + G
Sbjct: 1179 SPLYSPTSPG 1188
>gi|397629004|gb|EJK69153.1| hypothetical protein THAOC_09623 [Thalassiosira oceanica]
Length = 134
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 19/126 (15%)
Query: 719 DAMSPVIGADNE--GPWFMPDILVR-RSGEESVVGVIREVLPDGSCRVVLGSSG-----N 770
D S + G ++E WFM + V +S ++S VIREV V + G N
Sbjct: 19 DMESTIEGGNDEQAAAWFMERVCVTLKSTQQS--AVIREVQGGNVALVEIDGGGSQKVRN 76
Query: 771 GDTITALPNEIEIVPPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMA 830
GD + +V P + D + + GG G G+L+ +DGTD I+K + + + KI+D
Sbjct: 77 GD--------VTMVVPAEHDTVLVTGGAEVGVEGELVCIDGTDAILK-ESNDNFKIVDFV 127
Query: 831 ILAKLA 836
L K++
Sbjct: 128 HLVKIS 133
>gi|326634532|pdb|3QQC|D Chain D, Crystal Structure Of Archaeal Spt45 BOUND TO THE RNAP
CLAMP DOMAIN
Length = 163
Score = 45.8 bits (107), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAI 70
L I +++A +K YI++EA + V EA +G+R+ VP +E+ L +
Sbjct: 31 LPIYAILAPSRVKGYIFVEAPNKGVVDEAIRGIRHARGVLPGEVPFKEIEHFLEEKPAVS 90
Query: 71 DLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI 110
L V + G +KG AKVV +D + V V+ I I
Sbjct: 91 GLEPGDLVEVIAGPFKGQKAKVVKIDESKDEVVVQFIDAI 130
>gi|402218945|gb|EJT99020.1| subunit of DNA dependent RNA-polymerase [Dacryopinax sp. DJM-731 SS1]
Length = 1770
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 67/181 (37%), Gaps = 38/181 (20%)
Query: 584 PYMTPMRDAGAT-PIHDGMRT-------------PMRDRAWNPYTPMSPPRDNWEDGNPG 629
P++T AGAT P +D RT P YTP SP + +P
Sbjct: 1576 PFITSPLGAGATSPFYDPRRTAAMATSPTYSPTSPALQMTSPAYTPTSPA---YTPTSPN 1632
Query: 630 SWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYL-PST 688
TSP + P SP RA +P S S YS +S + SP+L P++
Sbjct: 1633 FSPTSPSFSPTSPNPRAATGYSPTSPQYSPTSPQYSPTSPQYTPTSPQYSPTSPHLSPTS 1692
Query: 689 PGGQP------------------MTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNE 730
P P M+P S SY P +P P +P G A SP G
Sbjct: 1693 PRYSPTSPVHGASTQFSPTSPAMMSPTSPSYSPASPAYSPTSPAYEG--AASPARGNQQN 1750
Query: 731 G 731
G
Sbjct: 1751 G 1751
>gi|389631979|ref|XP_003713642.1| DNA-directed RNA polymerase II largest subunit [Magnaporthe oryzae
70-15]
gi|351645975|gb|EHA53835.1| DNA-directed RNA polymerase II largest subunit [Magnaporthe oryzae
70-15]
Length = 1757
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 611 NPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTP 670
N Y+P SP + +P SP + PG S Y +P ++P +YS
Sbjct: 1650 NHYSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNAHYSP---- 1705
Query: 671 RDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPV 724
+S ++ +P+ P++PG P +P S S+ P +PG +GG D+ SP
Sbjct: 1706 --TSPSFQRSPAQASPTSPG--PYSPTSPSFSPRSPGRNNR---SGGQDSYSPT 1752
>gi|253723236|pdb|2E70|A Chain A, Solution Structure Of The Fifth Kow Motif Of Human
Transcription Elongation Factor Spt5
Length = 71
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 504 DALVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMIS 552
+ L+G TV++ GPYKGY G V D + RVEL S + ++VDR ++
Sbjct: 17 NELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLT 65
>gi|440467914|gb|ELQ37108.1| DNA-directed RNA polymerase II subunit RPB1 [Magnaporthe oryzae Y34]
gi|440478660|gb|ELQ59479.1| DNA-directed RNA polymerase II subunit RPB1 [Magnaporthe oryzae P131]
Length = 1745
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 53/114 (46%), Gaps = 11/114 (9%)
Query: 611 NPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTP 670
N Y+P SP + +P SP + PG S Y +P ++P +YS
Sbjct: 1638 NHYSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNAHYSP---- 1693
Query: 671 RDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPV 724
+S ++ +P+ P++PG P +P S S+ P +PG +GG D+ SP
Sbjct: 1694 --TSPSFQRSPAQASPTSPG--PYSPTSPSFSPRSPGRNNR---SGGQDSYSPT 1740
>gi|66359288|ref|XP_626822.1| DNA-directed RNA polymerase,possible RNA polymerase A/beta'/A''
subunit, long PHYSPTS repeat at
gi|46228363|gb|EAK89262.1| putative DNA-directed RNA polymerase,possible RNA polymerase
A/beta'/A'' subunit, long PHYSPTS repeat at C-terminus
[Cryptosporidium parvum Iowa II]
Length = 1902
Score = 45.8 bits (107), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 573 TPMHPSRTPLHPYMTPMR-DAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW 631
+P P +P P+ +P T H +P Y+P SP ++ +P
Sbjct: 1690 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP---HYSPTSPHYS 1746
Query: 632 GTSPQYQPGSP---PSRAYEAPT-----PGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP 683
TSP Y P SP P+ + +PT P S S +YS SS + + SP
Sbjct: 1747 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSP 1806
Query: 684 -YLPSTPGGQPMTPN---SASYLPGTPGGQPMTPG 714
Y P++P P +PN ++ Y P +P P +P
Sbjct: 1807 QYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPN 1841
Score = 40.4 bits (93), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 17/155 (10%)
Query: 564 TPRYGMGS--ETPMHPSRTPLHPYMTPMR-DAGATPIHDGMRTPMRDRAWNPYTPMSPPR 620
+P Y S +P P +P P+ +P T H +P Y+P SP
Sbjct: 1700 SPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP-- 1757
Query: 621 DNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPT-----PGSGWASTPGGNYSDAGTPRD 672
++ +P TSP Y P SP P+ + +PT P S S YS +
Sbjct: 1758 -HYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYN 1816
Query: 673 SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPG 707
+S + S Y P++P P +PN Y P +P
Sbjct: 1817 PASPNYSPTSHYSPTSPNYNPTSPN---YSPSSPN 1848
>gi|406700979|gb|EKD04138.1| DNA-directed RNA polymerase ii largest subunit [Trichosporon asahii
var. asahii CBS 8904]
Length = 1771
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 23/154 (14%)
Query: 564 TPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNW 623
+PRY +P PS +P P +P A+P + G RT ++P +P P
Sbjct: 1599 SPRY-----SPTSPSYSPTSPAYSP-----ASPAYGGGRT---SPGYSPTSPAYSPTSPM 1645
Query: 624 EDGNPGSWGTSPQYQPGSPP----SRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVN 679
+P TSPQY P SP S AY +P + A++P YS +S +
Sbjct: 1646 GATSPRYSPTSPQYSPASPAFSPTSPAYSPTSPQAFQATSP--KYSPTSPAFSPTSPSYS 1703
Query: 680 APSP-YLPSTPGGQPMTPNSASYLPGTPGGQPMT 712
SP Y P++P P +P +Y P +P P +
Sbjct: 1704 PTSPVYSPTSPSYSPASP---AYSPTSPVYSPTS 1734
>gi|67597591|ref|XP_666157.1| DNA-directed RNA polymerase II largest chain [Cryptosporidium hominis
TU502]
gi|54657094|gb|EAL35927.1| DNA-directed RNA polymerase (EC 2.7.7.6) II largest chain
[Cryptosporidium hominis]
Length = 1895
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 16/155 (10%)
Query: 573 TPMHPSRTPLHPYMTPMR-DAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSW 631
+P P +P P+ +P T H +P Y+P SP ++ +P
Sbjct: 1683 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP---HYSPTSPHYS 1739
Query: 632 GTSPQYQPGSP---PSRAYEAPT-----PGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP 683
TSP Y P SP P+ + +PT P S S +YS SS + + SP
Sbjct: 1740 PTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSP 1799
Query: 684 -YLPSTPGGQPMTPN---SASYLPGTPGGQPMTPG 714
Y P++P P +PN ++ Y P +P P +P
Sbjct: 1800 QYSPTSPNYNPASPNYSPTSHYSPTSPNYNPTSPN 1834
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 62/155 (40%), Gaps = 17/155 (10%)
Query: 564 TPRYGMGS--ETPMHPSRTPLHPYMTPMR-DAGATPIHDGMRTPMRDRAWNPYTPMSPPR 620
+P Y S +P P +P P+ +P T H +P Y+P SP
Sbjct: 1693 SPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP-- 1750
Query: 621 DNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPT-----PGSGWASTPGGNYSDAGTPRD 672
++ +P TSP Y P SP P+ + +PT P S S YS +
Sbjct: 1751 -HYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYN 1809
Query: 673 SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPG 707
+S + S Y P++P P +PN Y P +P
Sbjct: 1810 PASPNYSPTSHYSPTSPNYNPTSPN---YSPSSPN 1841
>gi|57641354|ref|YP_183832.1| transcription antitermination protein NusG [Thermococcus
kodakarensis KOD1]
gi|57159678|dbj|BAD85608.1| transcription antitermination protein [Thermococcus kodakarensis
KOD1]
Length = 152
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVM--LVPIREMTDVLA 64
K L + ++++ +K YI+IEA ++ V+EA +G+R ++++V+ +P E+ L
Sbjct: 28 KTYNLPLYAILSPSKVKGYIFIEAPNKSAVEEAIRGIR--HAKRVLPGEIPFSEIEHFLE 85
Query: 65 VESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI 110
+ V + G +KG+ AKVV VD + + V+L+ +
Sbjct: 86 EKPAVSGFEPGDIVELIAGPFKGEKAKVVRVDESKDEIVVELVSSV 131
>gi|401881990|gb|EJT46265.1| DNA-directed RNA polymerase ii largest subunit [Trichosporon asahii
var. asahii CBS 2479]
Length = 1787
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 23/154 (14%)
Query: 564 TPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNW 623
+PRY +P PS +P P +P A+P + G RT ++P +P P
Sbjct: 1599 SPRY-----SPTSPSYSPTSPAYSP-----ASPAYGGGRT---SPGYSPTSPAYSPTSPM 1645
Query: 624 EDGNPGSWGTSPQYQPGSPP----SRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVN 679
+P TSPQY P SP S AY +P + A++P YS +S +
Sbjct: 1646 GATSPRYSPTSPQYSPASPAFSPTSPAYSPTSPQAFQATSP--KYSPTSPAFSPTSPSYS 1703
Query: 680 APSP-YLPSTPGGQPMTPNSASYLPGTPGGQPMT 712
SP Y P++P P +P +Y P +P P +
Sbjct: 1704 PTSPVYSPTSPSYSPASP---AYSPTSPVYSPTS 1734
>gi|289192633|ref|YP_003458574.1| NusG antitermination factor [Methanocaldococcus sp. FS406-22]
gi|288939083|gb|ADC69838.1| NusG antitermination factor [Methanocaldococcus sp. FS406-22]
Length = 147
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESK 68
+L + S++A + LK Y+ +EA+ + V+E KG+ + + I E+ +L +
Sbjct: 26 EQLNVYSILASESLKGYVLVEAETKGDVEELIKGMPRVRGIVPGTIAIEEIEPLLTPKKI 85
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKL 106
++ + V + G +KG+ AKV+ VD ++ VT++L
Sbjct: 86 IENIEKGDVVEIIAGPFKGERAKVIRVDKNKEEVTLEL 123
>gi|390462987|ref|XP_003732945.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 isoform 2
[Callithrix jacchus]
Length = 1899
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1782 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1835
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1836 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1892
Query: 728 DN 729
D+
Sbjct: 1893 DD 1894
>gi|410906965|ref|XP_003966962.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like, partial
[Takifugu rubripes]
Length = 1628
Score = 45.4 bits (106), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 611 NPYTPMSPPRDNWEDGNPGSWGT-SPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGT 669
+P + MSP W G ++G SP G P A +P+ S AS YS A +
Sbjct: 1506 SPMSGMSPAMTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASD-ASGFSPGYSPAWS 1564
Query: 670 PRDSSSTYVNAPSPYLPSTPGGQPMTPN----SASYLPGTPGG-QPMTPG 714
P S SPY+PS PGG M+PN S +Y P +PGG P +PG
Sbjct: 1565 PTPGSPGSPGPASPYIPS-PGG-AMSPNYSPTSPAYEPRSPGGYTPQSPG 1612
>gi|327401544|ref|YP_004342383.1| NusG antitermination factor [Archaeoglobus veneficus SNP6]
gi|327317052|gb|AEA47668.1| NusG antitermination factor [Archaeoglobus veneficus SNP6]
Length = 151
Score = 45.4 bits (106), Expect = 0.14, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 57/122 (46%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K EL + S++A LK Y+ +EA+K + +A +GL ++ V E+ L
Sbjct: 26 KKYELGVYSILAPKELKGYVIVEAEKMEDLLKAIRGLPHVKGVVKGEVNFSEIEHFLTPR 85
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRIDLQALANKLEGREVAK 126
A + V + G +KG+LA V VD + +TV+LI + + K + V
Sbjct: 86 KAAEQIKEGFTVEIISGPFKGELAVVKRVDEAKNEITVELIEAVVPIPVTVKADHVRVVD 145
Query: 127 KK 128
KK
Sbjct: 146 KK 147
>gi|326672374|ref|XP_003199653.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Danio rerio]
Length = 1921
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 17/122 (13%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1806 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPTYTPTS 1859
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1860 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP------TYSPAISP 1913
Query: 728 DN 729
D+
Sbjct: 1914 DD 1915
>gi|256811382|ref|YP_003128751.1| transcription antitermination protein NusG [Methanocaldococcus
fervens AG86]
gi|256794582|gb|ACV25251.1| NusG antitermination factor [Methanocaldococcus fervens AG86]
Length = 147
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 54/98 (55%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESK 68
+L + S++A + LK Y+ +EA+ + V+E KG+ + V I E+ +L +
Sbjct: 26 EQLDVYSILASESLKGYVLVEAESKGDVEELIKGMPRVRGIVPGTVAIEEIEPLLTPKKI 85
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKL 106
++ + V + G +KG+ AKV+ VD ++ VT++L
Sbjct: 86 IENIEKGDVVEIIAGPFKGERAKVIRVDKNKEEVTLEL 123
>gi|126309154|ref|XP_001364909.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 isoform 2
[Monodelphis domestica]
Length = 1932
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1815 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1868
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1869 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1925
Query: 728 DN 729
D+
Sbjct: 1926 DD 1927
>gi|6677795|ref|NP_033115.1| DNA-directed RNA polymerase II subunit RPB1 [Mus musculus]
gi|200794|gb|AAA40071.1| RNA polymerase II [Mus musculus]
Length = 1932
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1815 YTPASP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1868
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1869 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1925
Query: 728 DN 729
D+
Sbjct: 1926 DD 1927
>gi|238487198|ref|XP_002374837.1| DNA-dependent RNA polymerase II largest subunit, putative
[Aspergillus flavus NRRL3357]
gi|317143741|ref|XP_001819667.2| DNA-directed RNA polymerase II subunit RPB1 [Aspergillus oryzae
RIB40]
gi|220699716|gb|EED56055.1| DNA-dependent RNA polymerase II largest subunit, putative
[Aspergillus flavus NRRL3357]
Length = 1744
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 65/158 (41%), Gaps = 34/158 (21%)
Query: 564 TPRYGMGSE--TPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRD 621
+PR+ M S +P PS P P +P A Y SP
Sbjct: 1597 SPRFSMTSPGFSPASPSFAPTSPAYSPTSPA--------------------YGQASPTSP 1636
Query: 622 NWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYV 678
++ +PG TSP Y P SP P+ +PT S ++P + G R S T
Sbjct: 1637 SYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSP----AIGGAARHLSPTSP 1692
Query: 679 NAPSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPG 714
+P Y P++PG P +P +Y P +P G P +PG
Sbjct: 1693 TSPK-YTPTSPGWSPTSPQ--TYSPTSPNFAGSPTSPG 1727
>gi|15668548|ref|NP_247346.1| transcription antitermination protein NusG [Methanocaldococcus
jannaschii DSM 2661]
gi|2499343|sp|Q57818.1|NUSG_METJA RecName: Full=Putative transcription antitermination protein NusG
gi|1591079|gb|AAB98361.1| LSU ribosomal protein L24A [Methanocaldococcus jannaschii DSM 2661]
Length = 147
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESK 68
+L + S++A + LK Y+ +EA+ + V+E KG+ + + I E+ +L +
Sbjct: 26 EQLDVYSILASESLKGYVLVEAETKGDVEELIKGMPRVRGIVPGTIAIEEIEPLLTPKKI 85
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKL 106
++ + V + G +KG+ AKV+ VD ++ VT++L
Sbjct: 86 IENIEKGDVVEIIAGPFKGERAKVIRVDKHKEEVTLEL 123
>gi|9955855|dbj|BAB12227.1| RNA polymerase II largest subunit [Aspergillus oryzae]
gi|83767526|dbj|BAE57665.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391867452|gb|EIT76698.1| RNA polymerase II, large subunit [Aspergillus oryzae 3.042]
Length = 1748
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 65/158 (41%), Gaps = 34/158 (21%)
Query: 564 TPRYGMGSE--TPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRD 621
+PR+ M S +P PS P P +P A Y SP
Sbjct: 1597 SPRFSMTSPGFSPASPSFAPTSPAYSPTSPA--------------------YGQASPTSP 1636
Query: 622 NWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYV 678
++ +PG TSP Y P SP P+ +PT S ++P + G R S T
Sbjct: 1637 SYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSP----AIGGAARHLSPTSP 1692
Query: 679 NAPSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPG 714
+P Y P++PG P +P +Y P +P G P +PG
Sbjct: 1693 TSPK-YTPTSPGWSPTSPQ--TYSPTSPNFAGSPTSPG 1727
>gi|444722932|gb|ELW63604.1| DNA-directed RNA polymerase II subunit RPB1 [Tupaia chinensis]
Length = 1801
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1684 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1737
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1738 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1794
Query: 728 DN 729
D+
Sbjct: 1795 DD 1796
>gi|301628367|ref|XP_002943327.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like, partial
[Xenopus (Silurana) tropicalis]
Length = 1946
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1829 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1882
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1883 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1939
Query: 728 DN 729
D+
Sbjct: 1940 DD 1941
>gi|119610588|gb|EAW90182.1| polymerase (RNA) II (DNA directed) polypeptide A, 220kDa, isoform
CRA_b [Homo sapiens]
Length = 1511
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1394 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1447
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1448 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1504
Query: 728 DN 729
D+
Sbjct: 1505 DD 1506
>gi|403223272|dbj|BAM41403.1| DNA-directed RNA polymerase [Theileria orientalis strain Shintoku]
Length = 1645
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 59/142 (41%), Gaps = 11/142 (7%)
Query: 573 TPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWG 632
+PM P+ +P + +P A A+P + +P Y+P SP + +P
Sbjct: 1495 SPMSPT-SPAYSVTSPTYGAAASPTYLAA-SPSYSPTSPAYSPTSPA---YSPTSPAYSP 1549
Query: 633 TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQ 692
TSP Y P SP AY +P S S A +P + Y Y P++P
Sbjct: 1550 TSPSYSPTSP---AYSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYSPTSPAYSPTSPAYS 1606
Query: 693 PMTPNSASYLPGTPGGQPMTPG 714
P +P +Y P +P P +P
Sbjct: 1607 PTSP---AYSPTSPAYSPTSPN 1625
>gi|341581834|ref|YP_004762326.1| transcription antitermination protein NusG [Thermococcus sp. 4557]
gi|340809492|gb|AEK72649.1| transcription antitermination protein NusG [Thermococcus sp. 4557]
Length = 152
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K L + +++A +K YI+IEA ++ V EA KG+R+ V E+ L +
Sbjct: 28 KTYNLPVYAILAPSKVKGYIFIEAPSKSAVDEAIKGIRHAKGTLPGEVKFEEIEHFLEEK 87
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI 110
V + G +KG+ AKVV VD + + V+LI I
Sbjct: 88 PAVSGFEPGDIVELISGPFKGEKAKVVRVDEAKDEIVVELIGSI 131
>gi|825713|emb|CAA52862.1| RNA polymerase II largest subunit [Homo sapiens]
Length = 1970
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|348523738|ref|XP_003449380.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like
[Oreochromis niloticus]
Length = 1966
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 17/122 (13%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1851 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPTYTPTS 1904
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1905 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP------TYSPAISP 1958
Query: 728 DN 729
D+
Sbjct: 1959 DD 1960
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 611 NPYTPMSPPRDNWEDGNPGSWGT-SPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGT 669
+P + MSP W G ++G SP G P A +P+ S AS YS A +
Sbjct: 1506 SPMSGMSPAMTPWNTGATPAYGAWSPSVGSGMTPGGAGFSPSAASD-ASGFSPGYSPAWS 1564
Query: 670 PRDSSSTYVNAPSPYLPSTPGGQPMTPN----SASYLPGTPGG-QPMTPG 714
P S SPY+PS PGG M+PN S +Y P +PGG P +PG
Sbjct: 1565 PTPGSPGSPGPASPYIPS-PGGA-MSPNYSPTSPAYEPRSPGGYTPQSPG 1612
>gi|332847192|ref|XP_511300.3| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Pan
troglodytes]
Length = 1907
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1790 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1843
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1844 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1900
Query: 728 DN 729
D+
Sbjct: 1901 DD 1902
>gi|68370162|ref|XP_682682.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 isoform 1
[Danio rerio]
Length = 1972
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 17/122 (13%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1857 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPTYTPTS 1910
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1911 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP------TYSPAISP 1964
Query: 728 DN 729
D+
Sbjct: 1965 DD 1966
>gi|344290440|ref|XP_003416946.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Loxodonta
africana]
Length = 1970
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|281352199|gb|EFB27783.1| hypothetical protein PANDA_013866 [Ailuropoda melanoleuca]
Length = 1989
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1872 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1925
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1926 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1982
Query: 728 DN 729
D+
Sbjct: 1983 DD 1984
>gi|395836506|ref|XP_003791195.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Otolemur
garnettii]
Length = 1970
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|2443334|dbj|BAA22376.1| RNA polymerase II largest subunit [Cricetulus griseus]
Length = 1970
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|351701567|gb|EHB04486.1| DNA-directed RNA polymerase II subunit RPB1 [Heterocephalus glaber]
gi|417406836|gb|JAA50059.1| Putative rna polymerase i large subunit [Desmodus rotundus]
Length = 1970
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|301778185|ref|XP_002924473.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like
[Ailuropoda melanoleuca]
Length = 1970
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|281185484|sp|P24928.2|RPB1_HUMAN RecName: Full=DNA-directed RNA polymerase II subunit RPB1; Short=RNA
polymerase II subunit B1; AltName: Full=DNA-directed RNA
polymerase II subunit A; AltName: Full=DNA-directed RNA
polymerase III largest subunit; AltName:
Full=RNA-directed RNA polymerase II subunit RPB1
Length = 1970
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|4505939|ref|NP_000928.1| DNA-directed RNA polymerase II subunit RPB1 [Homo sapiens]
gi|345842509|ref|NP_001230931.1| polymerase (RNA) II (DNA directed) polypeptide A [Cricetulus griseus]
gi|332251063|ref|XP_003274666.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Nomascus
leucogenys]
gi|403274932|ref|XP_003929214.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Saimiri
boliviensis boliviensis]
gi|36124|emb|CAA45125.1| RNA polymerase II largest subunit [Homo sapiens]
gi|2443336|dbj|BAA22377.1| RNA polymerase II largest subunit [Cricetulus griseus]
gi|14328881|dbj|BAB60684.1| RNA polymerase II largest subunit [Cricetulus griseus]
gi|119610587|gb|EAW90181.1| polymerase (RNA) II (DNA directed) polypeptide A, 220kDa, isoform
CRA_a [Homo sapiens]
gi|223460954|gb|AAI37232.1| Polymerase (RNA) II (DNA directed) polypeptide A, 220kDa [Homo
sapiens]
Length = 1970
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|432105605|gb|ELK31799.1| DNA-directed RNA polymerase II subunit RPB1 [Myotis davidii]
Length = 1970
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|402898581|ref|XP_003912299.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Papio anubis]
Length = 1970
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|345800197|ref|XP_857844.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB1 isoform 3 [Canis lupus familiaris]
Length = 1970
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|329663165|ref|NP_001193242.1| DNA-directed RNA polymerase II subunit RPB1 [Bos taurus]
Length = 1970
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|395748505|ref|XP_002827010.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB1 [Pongo abelii]
Length = 1967
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1850 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1903
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1904 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1960
Query: 728 DN 729
D+
Sbjct: 1961 DD 1962
>gi|296201388|ref|XP_002748007.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 isoform 1
[Callithrix jacchus]
Length = 1937
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1820 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1873
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1874 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1930
Query: 728 DN 729
D+
Sbjct: 1931 DD 1932
>gi|431894008|gb|ELK03814.1| DNA-directed RNA polymerase II subunit RPB1 [Pteropus alecto]
Length = 1975
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1858 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1911
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1912 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1968
Query: 728 DN 729
D+
Sbjct: 1969 DD 1970
>gi|133327|sp|P08775.3|RPB1_MOUSE RecName: Full=DNA-directed RNA polymerase II subunit RPB1; Short=RNA
polymerase II subunit B1; AltName: Full=DNA-directed RNA
polymerase II subunit A; AltName: Full=DNA-directed RNA
polymerase III largest subunit
Length = 1970
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPASP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|327287678|ref|XP_003228555.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Anolis
carolinensis]
Length = 1969
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1852 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1905
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1906 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1962
Query: 728 DN 729
D+
Sbjct: 1963 DD 1964
>gi|395533542|ref|XP_003768816.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Sarcophilus
harrisii]
Length = 1921
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1804 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1857
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1858 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1914
Query: 728 DN 729
D+
Sbjct: 1915 DD 1916
>gi|126309152|ref|XP_001364837.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 isoform 1
[Monodelphis domestica]
Length = 1970
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1963
Query: 728 DN 729
D+
Sbjct: 1964 DD 1965
>gi|451846374|gb|EMD59684.1| hypothetical protein COCSADRAFT_164565 [Cochliobolus sativus ND90Pr]
Length = 1737
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 573 TPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPM--SPPRDNWEDGNPGS 630
+P P +P P + R A +P + M +P ++P +P SP ++ +P
Sbjct: 1573 SPTSPGYSPTSPGIASPRFAATSPGY--MASPTSPH-YSPTSPRYGSPTSPSYSPTSPAG 1629
Query: 631 WG-TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTP 689
+ TSPQY P SP Y +P + GG S A +P +S Y Y P++P
Sbjct: 1630 YSPTSPQYSPTSP---NYSPTSP-----TFMGGATSPAYSP--TSPQYSPTSPQYSPTSP 1679
Query: 690 GGQ-------PMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMP 736
Q P +P S Y P +P P +P G SP + GP + P
Sbjct: 1680 QYQAGSDRRSPTSPTSPQYSPTSPRYSPTSPA-GAFSPTSPRYSPTSPGPAYSP 1732
Score = 40.0 bits (92), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 62/147 (42%), Gaps = 33/147 (22%)
Query: 564 TPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNW 623
+PRYG +P PS +P P AG +P +P Y+P SP N+
Sbjct: 1611 SPRYG----SPTSPSYSPTSP-------AGYSPT-----SPQ-------YSPTSP---NY 1644
Query: 624 EDGNPGSWG--TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAP 681
+P G TSP Y P SP Y +P S SD +P +S +
Sbjct: 1645 SPTSPTFMGGATSPAYSPTSP---QYSPTSPQYSPTSPQYQAGSDRRSPTSPTSPQYSPT 1701
Query: 682 SP-YLPSTPGGQPMTPNSASYLPGTPG 707
SP Y P++P G +P S Y P +PG
Sbjct: 1702 SPRYSPTSPAGA-FSPTSPRYSPTSPG 1727
>gi|451994492|gb|EMD86962.1| hypothetical protein COCHEDRAFT_1217961 [Cochliobolus heterostrophus
C5]
Length = 1737
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 73/174 (41%), Gaps = 24/174 (13%)
Query: 573 TPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPM--SPPRDNWEDGNPGS 630
+P P +P P + R A +P + M +P ++P +P SP ++ +P
Sbjct: 1573 SPTSPGYSPTSPGIASPRFAATSPGY--MASPTSPH-YSPTSPRYGSPTSPSYSPTSPAG 1629
Query: 631 WG-TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTP 689
+ TSPQY P SP Y +P + GG S A +P +S Y Y P++P
Sbjct: 1630 YSPTSPQYSPTSP---NYSPTSP-----TFMGGATSPAYSP--TSPQYSPTSPQYSPTSP 1679
Query: 690 GGQ-------PMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWFMP 736
Q P +P S Y P +P P +P G SP + GP + P
Sbjct: 1680 QYQAGSDRRSPTSPTSPQYSPTSPRYSPTSPA-GAFSPTSPRYSPTSPGPAYSP 1732
Score = 40.0 bits (92), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 62/147 (42%), Gaps = 33/147 (22%)
Query: 564 TPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNW 623
+PRYG +P PS +P P AG +P +P Y+P SP N+
Sbjct: 1611 SPRYG----SPTSPSYSPTSP-------AGYSPT-----SPQ-------YSPTSP---NY 1644
Query: 624 EDGNPGSWG--TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAP 681
+P G TSP Y P SP Y +P S SD +P +S +
Sbjct: 1645 SPTSPTFMGGATSPAYSPTSP---QYSPTSPQYSPTSPQYQAGSDRRSPTSPTSPQYSPT 1701
Query: 682 SP-YLPSTPGGQPMTPNSASYLPGTPG 707
SP Y P++P G +P S Y P +PG
Sbjct: 1702 SPRYSPTSPAGA-FSPTSPRYSPTSPG 1727
>gi|390960570|ref|YP_006424404.1| transcription antitermination protein NusG [Thermococcus sp. CL1]
gi|390518878|gb|AFL94610.1| transcription antitermination protein NusG [Thermococcus sp. CL1]
Length = 152
Score = 44.3 bits (103), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K L + +++A +K YI++EA ++ V EA KG+R+ V E+ L +
Sbjct: 28 KTYNLPVYAILAPSKVKGYIFVEAPSKSAVDEAIKGIRHAKGTLPGEVKFEEIEHFLEEK 87
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI 110
V + G +KG+ AKVV VD + + V+LI I
Sbjct: 88 PAVSGFEPGDIVELISGPFKGEKAKVVRVDEAKDEIVVELIGSI 131
>gi|293340189|ref|XP_002724554.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 isoform 2
[Rattus norvegicus]
gi|293351610|ref|XP_002727769.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 isoform 1
[Rattus norvegicus]
Length = 1932
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1815 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1868
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTP 713
+S TY Y P++P P +P ++Y P +PG P +P
Sbjct: 1869 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP 1914
>gi|340924320|gb|EGS19223.1| hypothetical protein CTHT_0058480 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1756
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 46/111 (41%), Gaps = 21/111 (18%)
Query: 627 NPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP--- 683
+P TSP Y P SP + + +PT +AS +YS +S ++A SP
Sbjct: 1631 SPNYSPTSPSYSPASPAATRHYSPTSPQQFASPTSPSYSPTSPTYSPASPNLHATSPSYS 1690
Query: 684 -------------YLPSTPG-----GQPMTPNSASYLPGTPGGQPMTPGTG 716
Y P++P GQ +P S Y P +P P TPG G
Sbjct: 1691 PASPTWSPTSPDAYSPTSPSFHRSPGQQASPTSPGYSPTSPAFSPRTPGRG 1741
>gi|212223324|ref|YP_002306560.1| transcription antitermination protein NusG [Thermococcus onnurineus
NA1]
gi|212008281|gb|ACJ15663.1| transcription antitermination protein [Thermococcus onnurineus NA1]
Length = 152
Score = 44.3 bits (103), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K L + +++A +K YI++EA ++ V EA KG+R+ V E+ L +
Sbjct: 28 KTYNLPVYAILAPSKVKGYIFVEAPSKSAVDEAIKGIRHAKGTLPGEVRFEEIEHFLEEK 87
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI 110
V + G +KG+ AKVV VD + + V+LI I
Sbjct: 88 PAVSGFEPGDIVELIAGPFKGEKAKVVRVDEAKDEIVVELIGSI 131
>gi|356574186|ref|XP_003555232.1| PREDICTED: uncharacterized protein LOC100777969 [Glycine max]
Length = 967
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 506 LVGTTVKVRLGPYKGYRGRVVDVKGQSVRVELESQMKVVTVDRSMISD 553
+G T+++R+GP KGY RV+ ++ V V+L+SQ KV+TV +S+
Sbjct: 60 TIGQTLRIRIGPLKGYICRVIALRRADVTVKLDSQQKVLTVKCEHLSE 107
>gi|119610589|gb|EAW90183.1| polymerase (RNA) II (DNA directed) polypeptide A, 220kDa, isoform
CRA_c [Homo sapiens]
Length = 1549
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1432 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1485
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1486 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1542
Query: 728 DN 729
D+
Sbjct: 1543 DD 1544
>gi|255513719|gb|EET89984.1| NusG antitermination factor [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 150
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPI--RE 58
+Q + KG + I S+I ++ L+ YI +EA E + R+I + ++ P+ +
Sbjct: 19 LQSKLSKG-DAPIYSIIVIEGLRGYIIVEAQDELACRNFITKERSI--KGIIPKPMDPAD 75
Query: 59 MTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
+ ++A +S A D+SR+ V G +KG AKV+ VD ++ +TV+L+
Sbjct: 76 VEKLIATKSTAQDISRNDIVEFTSGPFKGYKAKVLKVDELKSDITVELM 124
>gi|189197231|ref|XP_001934953.1| DNA-directed RNA polymerase II subunit RPB1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187980901|gb|EDU47527.1| DNA-directed RNA polymerase II subunit RPB1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1742
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 27/182 (14%)
Query: 570 GSETPMHPSRTPLHPYMTPMRDAGATPIHDG-----MRTPMRDRAWNPYTPM--SPPRDN 622
G +P+ P +P P +P A+P M +P ++P +P SP +
Sbjct: 1568 GFTSPVSPGFSPTSPGYSPTSPGTASPRFAATSPGYMASPTSPH-YSPTSPRYGSPTSPS 1626
Query: 623 WEDGNPGSWG-TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAP 681
+ +P + TSPQY P SP Y +P + GG S A +P +S Y
Sbjct: 1627 YSPTSPAGYSPTSPQYSPTSP---NYSPTSP-----TFMGGATSPAYSP--TSPQYSPTS 1676
Query: 682 SPYLPSTPGGQ-------PMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWF 734
Y P++P Q P +P S Y P +P P +P G SP + GP +
Sbjct: 1677 PQYSPTSPQYQATSDRRSPTSPTSPQYSPTSPRYSPTSPA-GSFSPTSPRYSPTSPGPAY 1735
Query: 735 MP 736
P
Sbjct: 1736 SP 1737
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 558 STPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPM- 616
++P +PR+ S M +P + +P + +P + +P ++P +P
Sbjct: 1587 TSPGTASPRFAATSPGYMASPTSPHYSPTSPRYGSPTSPSY----SPTSPAGYSPTSPQY 1642
Query: 617 SPPRDNWEDGNPGSWG--TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSS 674
SP N+ +P G TSP Y P SP Y +P S SD +P +
Sbjct: 1643 SPTSPNYSPTSPTFMGGATSPAYSPTSP---QYSPTSPQYSPTSPQYQATSDRRSPTSPT 1699
Query: 675 STYVNAPSP-YLPSTPGGQPMTPNSASYLPGTPG 707
S + SP Y P++P G +P S Y P +PG
Sbjct: 1700 SPQYSPTSPRYSPTSPAGS-FSPTSPRYSPTSPG 1732
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 13/127 (10%)
Query: 598 HDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWA 657
+DG R+P + +T MSP + +PG TSP Y P SP + + G+
Sbjct: 1551 YDGGRSP----GGSGFTGMSPGFTS--PVSPGFSPTSPGYSPTSPGTASPRFAATSPGYM 1604
Query: 658 STPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGG 717
++P + +PR S T +PS Y P++P G +P S Y P +P P +P G
Sbjct: 1605 ASPTSPHYSPTSPRYGSPT---SPS-YSPTSPAG--YSPTSPQYSPTSPNYSPTSPTFMG 1658
Query: 718 LDAMSPV 724
A SP
Sbjct: 1659 -GATSPA 1664
>gi|109488292|ref|XP_343923.3| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 isoform 2
[Rattus norvegicus]
gi|109491096|ref|XP_001079162.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 isoform 1
[Rattus norvegicus]
Length = 1970
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPTSP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTP 713
+S TY Y P++P P +P ++Y P +PG P +P
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP 1952
>gi|358057836|dbj|GAA96338.1| hypothetical protein E5Q_03004 [Mixia osmundae IAM 14324]
Length = 2471
Score = 43.9 bits (102), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 76/195 (38%), Gaps = 56/195 (28%)
Query: 565 PRYGMGSETPMHPS-RTPLH------PYM------TPMRD------AGA---TPIHDGMR 602
P M E MH + RTPL PYM TPM D +GA +P++ G
Sbjct: 1499 PAMNMMDEMFMHKTGRTPLQGQGHSTPYMDVGDGRTPMVDMSFDGLSGAGQFSPVNTG-- 1556
Query: 603 TPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQ----------------YQPGSPPSRA 646
M D + Y S + G PG TSPQ Y P SP +
Sbjct: 1557 EVMLDGSMTAYGFGSGQTSPYSIGGPGDLNTSPQGAYSPTSPGYSPASPSYVPTSPNAMG 1616
Query: 647 YEAP----TPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQP----MTPNS 698
+P +P S W + GN S A +P +P+ Y P++P P +P+S
Sbjct: 1617 ATSPMFRTSPTSPWVNGALGNTSPAYSP--------TSPNHYSPASPNFSPASPRFSPSS 1668
Query: 699 ASYLPGTPGGQPMTP 713
+ P +P P +P
Sbjct: 1669 PRFSPASPNFSPASP 1683
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 66/157 (42%), Gaps = 28/157 (17%)
Query: 570 GSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPM-RDRAWNP------------YTPM 616
G+ +P P +P P P +P G +PM R +P Y+P
Sbjct: 1591 GAYSPTSPGYSPASPSYVP-----TSPNAMGATSPMFRTSPTSPWVNGALGNTSPAYSPT 1645
Query: 617 SPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST 676
SP +++ +P SP++ P SP +P S S NY+ G R S ++
Sbjct: 1646 SP--NHYSPASPNFSPASPRFSPSSPRF------SPASPNFSPASPNYAPNGQRRASPTS 1697
Query: 677 YVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTP 713
+P+ + +P GQ +P S SY P +P P +P
Sbjct: 1698 PQFSPAGH--RSPTGQRYSPTSPSYSPTSPAFSPTSP 1732
>gi|2145091|gb|AAB58418.1| RNA polymerase II largest subunit [Mus musculus]
Length = 1966
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P SP Y TP S S TP
Sbjct: 1853 YTPASP---KYSPTSPKYSPTSPKYSPTSP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1906
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTP 713
+S TY Y P++P P +P ++Y P +PG P +P
Sbjct: 1907 PKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP 1952
>gi|321259651|ref|XP_003194546.1| DNA-directed RNA polymerase II largest subunit [Cryptococcus gattii
WM276]
gi|317461017|gb|ADV22759.1| DNA-directed RNA polymerase II largest subunit, putative
[Cryptococcus gattii WM276]
Length = 1786
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 611 NPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDA 667
+PY+P SP + +P TSPQY P SP P+ +PT S ++P A
Sbjct: 1643 SPYSPTSPA---YSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAP--FQA 1697
Query: 668 GTPRDSSSTYVNAPSP--YLPSTPGGQP----MTPNSASYLPGTPGGQPMTPGTGG 717
+PR S ++ +P+ Y P++P P +P S +Y P +P P +P GG
Sbjct: 1698 TSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGG 1753
>gi|330931381|ref|XP_003303389.1| hypothetical protein PTT_15561 [Pyrenophora teres f. teres 0-1]
gi|311320680|gb|EFQ88526.1| hypothetical protein PTT_15561 [Pyrenophora teres f. teres 0-1]
Length = 1738
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 27/182 (14%)
Query: 570 GSETPMHPSRTPLHPYMTPMRDAGATPIHDG-----MRTPMRDRAWNPYTPM--SPPRDN 622
G +P+ P +P P +P A+P M +P ++P +P SP +
Sbjct: 1568 GFTSPVSPGFSPTSPGYSPTSPGTASPRFAATSPGYMASPTSPH-YSPTSPRYGSPTSPS 1626
Query: 623 WEDGNPGSWG-TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAP 681
+ +P + TSPQY P SP Y +P + GG S A +P +S Y
Sbjct: 1627 YSPTSPAGYSPTSPQYSPTSP---NYSPTSP-----TFMGGATSPAYSP--TSPQYSPTS 1676
Query: 682 SPYLPSTPGGQ-------PMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPWF 734
Y P++P Q P +P S Y P +P P +P G SP + GP +
Sbjct: 1677 PQYSPTSPQYQATSDRRSPTSPTSPQYSPTSPRYSPTSPA-GSFSPTSPRYSPTSPGPAY 1735
Query: 735 MP 736
P
Sbjct: 1736 SP 1737
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Query: 558 STPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPM- 616
++P +PR+ S M +P + +P + +P + +P ++P +P
Sbjct: 1587 TSPGTASPRFAATSPGYMASPTSPHYSPTSPRYGSPTSPSY----SPTSPAGYSPTSPQY 1642
Query: 617 SPPRDNWEDGNPGSWG--TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSS 674
SP N+ +P G TSP Y P SP Y +P S SD +P +
Sbjct: 1643 SPTSPNYSPTSPTFMGGATSPAYSPTSP---QYSPTSPQYSPTSPQYQATSDRRSPTSPT 1699
Query: 675 STYVNAPSP-YLPSTPGGQPMTPNSASYLPGTPG 707
S + SP Y P++P G +P S Y P +PG
Sbjct: 1700 SPQYSPTSPRYSPTSPAGS-FSPTSPRYSPTSPG 1732
Score = 39.3 bits (90), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 13/133 (9%)
Query: 592 AGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPT 651
+G +DG R+P + +T MSP + +PG TSP Y P SP + +
Sbjct: 1545 SGGFSPYDGGRSP----GGSGFTGMSPGFTS--PVSPGFSPTSPGYSPTSPGTASPRFAA 1598
Query: 652 PGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPM 711
G+ ++P + +PR S T +PS Y P++P G +P S Y P +P P
Sbjct: 1599 TSPGYMASPTSPHYSPTSPRYGSPT---SPS-YSPTSPAG--YSPTSPQYSPTSPNYSPT 1652
Query: 712 TPGTGGLDAMSPV 724
+P G A SP
Sbjct: 1653 SPTFMG-GATSPA 1664
>gi|118575540|ref|YP_875283.1| ribosomal protein L24A [Cenarchaeum symbiosum A]
gi|118194061|gb|ABK76979.1| ribosomal protein L24A [Cenarchaeum symbiosum A]
Length = 131
Score = 43.5 bits (101), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESK 68
+++ I+SV +D+LK Y+ +EA+ +A G+R+I Q + +++ L +S
Sbjct: 13 NKIDIQSVFVVDNLKGYVVVEANDPNAAYQATDGVRHIKGQLRGELDFKDIEGYLVKKST 72
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
L +D V + G +KG A + +D+ ++ TV L+
Sbjct: 73 VTSLEKDQTVEITGGPFKGMKASITRIDHEKEEATVVLL 111
>gi|58267574|ref|XP_570943.1| DNA-directed RNA polymerase ii largest subunit [Cryptococcus
neoformans var. neoformans JEC21]
gi|134112243|ref|XP_775097.1| hypothetical protein CNBE3710 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257749|gb|EAL20450.1| hypothetical protein CNBE3710 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227177|gb|AAW43636.1| DNA-directed RNA polymerase ii largest subunit, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 1786
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 611 NPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDA 667
+PY+P SP + +P TSPQY P SP P+ +PT S ++P A
Sbjct: 1643 SPYSPTSPA---YSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAP--FQA 1697
Query: 668 GTPRDSSSTYVNAPSP--YLPSTPGGQP----MTPNSASYLPGTPGGQPMTPGTGG 717
+PR S ++ +P+ Y P++P P +P S +Y P +P P +P GG
Sbjct: 1698 TSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGG 1753
>gi|240102542|ref|YP_002958851.1| transcription antitermination protein NusG [Thermococcus
gammatolerans EJ3]
gi|239910096|gb|ACS32987.1| Ribosomal protein L26E (rpl26E) [Thermococcus gammatolerans EJ3]
Length = 152
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K L + +++A +K YI++EA ++ V EA KG+R+ V E+ L +
Sbjct: 28 KTYNLPVYAILAPSKVKGYIFVEAPSKSAVDEAIKGIRHARGTLPGEVKFEEIEHFLEEK 87
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
V + G +KG+ AKVV VD + + V+LI
Sbjct: 88 PAVSGFEPGDIVELISGPFKGEKAKVVRVDESKDEIVVELI 128
>gi|409096639|ref|ZP_11216663.1| transcription antitermination protein NusG [Thermococcus zilligii
AN1]
Length = 152
Score = 43.5 bits (101), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K L I +++ +K YI+IEA ++ V EA KG+R+ V E+ L +
Sbjct: 28 KTHNLPIYAILVPSKVKGYIFIEAPNKSAVDEAIKGIRHAKGTLPGEVKFSEIEHFLEEK 87
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
V + G +KG+ AKVV VD + + V+LI
Sbjct: 88 PAVSGFEPGDIVELISGPFKGEKAKVVRVDETKDEIVVELI 128
>gi|453086034|gb|EMF14076.1| DNA-dependent RNA polymerase II largest subunit [Mycosphaerella
populorum SO2202]
Length = 1780
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 586 MTPMRDAGATPIHDGMRTPMRDRAWN------PYTPMSPPRDNWEDG-----------NP 628
M+PM D TP M +PM + + ++P+ P + G +P
Sbjct: 1493 MSPMADGAMTPYD--MGSPMSESGFTGPDYGASFSPIINPGQDEGGGLTAYGGFDGGMSP 1550
Query: 629 GSWGTSPQYQPGSPPSRAYEAPTPGSGWASTP-----GGNYS--DAGTPRDSSSTYVNAP 681
G SP Y P SP S +PG G +P GG +S G S + + +P
Sbjct: 1551 YRGGMSPGYAPQSPFSAGMSPASPGYGGGYSPSSPSFGGGFSPQSPGAALTSPAYQMGSP 1610
Query: 682 SPYLPSTPGGQPMTPNSASYLPGTPGG 708
+ Y P++P P +PN + P GG
Sbjct: 1611 AGYSPASPAYSPTSPNYSPSSPAWSGG 1637
>gi|298675983|ref|YP_003727733.1| NusG antitermination factor [Methanohalobium evestigatum Z-7303]
gi|298288971|gb|ADI74937.1| NusG antitermination factor [Methanohalobium evestigatum Z-7303]
Length = 157
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
M + + +L IR+VIA D LK Y+ +EA A V++A + + + + I E+T
Sbjct: 27 MVAQVTRKDKLDIRAVIAPDELKGYVLVEALDSATVEQAIQRVPHAKALVKGQSSIDEIT 86
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKL 106
L + ++ T + + G +KG+ A+V VD + +TV+L
Sbjct: 87 HFLTPKPTVTGITEGTIIEITSGPFKGEKARVKRVDEGHEEITVEL 132
>gi|115910670|ref|XP_788781.2| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform 3
[Strongylocentrotus purpuratus]
Length = 1921
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 577 PSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQ 636
PS++ + P MTP + GATP+H +PM P P P N S G SP
Sbjct: 1508 PSQS-MSPQMTPW-NQGATPMHGASWSPMMGSGMTPGGPGFSP------ANSESTGFSPA 1559
Query: 637 YQPGSPPSRAYEAPTPGSGWASTPGGNY--SDAGTPRDSSSTYVNAPSPYLPSTPGGQPM 694
Y P P + +PGS A++P Y S AG S S + P P+TP
Sbjct: 1560 YSPAWSP----QPQSPGSP-ANSP---YIPSPAGPMSPSYSPASPSYLPASPATPQSPGY 1611
Query: 695 TPNSASYLPGTPG 707
+P S SY P +PG
Sbjct: 1612 SPTSPSYSPTSPG 1624
>gi|402465815|gb|EJW01464.1| hypothetical protein EDEG_03952 [Edhazardia aedis USNM 41457]
Length = 884
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 13 IRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESKAIDL 72
I SVI L YIYIE+ V + +GL+ + + VP+ EM D L +++ + L
Sbjct: 208 ILSVIVKPDLVGYIYIESYSRQAVIDVLQGLKYVSGSRTSAVPLNEMIDALTIKTTPV-L 266
Query: 73 SRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLIPRI 110
++ + ++K G YK ++ ++ N + V V ++P+I
Sbjct: 267 AK--YAKIKRGKYKNEVCEIKKQIN-SEMVKVAIVPQI 301
>gi|299116996|emb|CBN73767.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1904
Score = 43.5 bits (101), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 17/151 (11%)
Query: 573 TPMHPSRTPLHPYMTPMRDAGA--TPIHDGMRTPMRDRAWNPYTP-MSPPRDNWEDGNPG 629
+P P+ +P P +P A + +P + A++P +P SP + +P
Sbjct: 1687 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP-----AYSPTSPAYSPTSPAYSPTSPA 1741
Query: 630 SWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTP 689
TSP Y P SP AY +P S S A +P +S Y Y P++P
Sbjct: 1742 YSPTSPAYSPTSP---AYSPTSPAYSPTSPAYSPTSPAYSP--TSPAYSPTSPAYSPTSP 1796
Query: 690 GGQP----MTPNSASYLPGTPGGQPMTPGTG 716
P +P S +Y P +P P +PG G
Sbjct: 1797 AYSPTSPAYSPTSPAYSPTSPAYSPTSPGAG 1827
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 22/126 (17%)
Query: 573 TPMHPSRTPLHPYMTPMRDAGA--TPIHDGMRTPMRDRAWNPYTP-MSPPRDNWEDGNPG 629
+P P+ +P P +P A + +P + A++P +P SP + +P
Sbjct: 1757 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP-----AYSPTSPAYSPTSPAYSPTSPA 1811
Query: 630 SWGTSPQYQPGSP----PSRAYEAP--TPGSGWASTPGGN---YSDAGTPRDSSSTYVNA 680
TSP Y P SP P+ ++P +PG+G A++P G YS GT S Y A
Sbjct: 1812 YSPTSPAYSPTSPGAGSPASPEDSPGTSPGAGGATSPAGGTSPYSPMGT-----SPYAGA 1866
Query: 681 PSPYLP 686
SPY P
Sbjct: 1867 SSPYSP 1872
>gi|302835796|ref|XP_002949459.1| hypothetical protein VOLCADRAFT_80692 [Volvox carteri f. nagariensis]
gi|300265286|gb|EFJ49478.1| hypothetical protein VOLCADRAFT_80692 [Volvox carteri f. nagariensis]
Length = 1879
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 77/180 (42%), Gaps = 25/180 (13%)
Query: 558 STPYRDTP-RYGMGSETPMHPSR--TPLH-PYM-----TPMRDAGATPIHDGMRTPMRDR 608
+TP R TP R + PM PS +P+H P++ +P+ +P+H G PM
Sbjct: 1494 ATPGRYTPGRSPHRTPGPMSPSHMLSPMHSPFIGGGAFSPIVGGAFSPVH-GSGAPMSP- 1551
Query: 609 AWNPYTP-MSPPRDNWEDGNPGSWGTSPQYQPGSPP----SRAYEAPTPGSGWASTPGGN 663
++P +P SP + +P TSP Y P SP S AY +P S
Sbjct: 1552 GYSPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 1611
Query: 664 YSDAGTPRD-----SSSTYVNAPSPYLPSTPGGQP----MTPNSASYLPGTPGGQPMTPG 714
S A +P +S Y Y P++P P +P S +Y P +P P +PG
Sbjct: 1612 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPG 1671
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 63/150 (42%), Gaps = 13/150 (8%)
Query: 570 GSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTP-MSPPRDNWEDGNP 628
G+ +P+H S P+ P +P G +P A++P +P SP + +P
Sbjct: 1537 GAFSPVHGSGAPMSPGYSPT-SPGYSPTSPAYSP--TSPAYSPTSPAYSPTSPAYSPTSP 1593
Query: 629 GSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPST 688
TSP Y P SP AY +P S S A +P +S Y Y P++
Sbjct: 1594 AYSPTSPAYSPTSP---AYSPTSPAYSPTSPAYSPTSPAYSP--TSPAYSPTSPAYSPTS 1648
Query: 689 PGGQP----MTPNSASYLPGTPGGQPMTPG 714
P P +P S +Y P +PG P +P
Sbjct: 1649 PAYSPTSPAYSPTSPAYSPTSPGFSPTSPA 1678
>gi|242011533|ref|XP_002426503.1| U2 snRNP component prp10, putative [Pediculus humanus corporis]
gi|212510629|gb|EEB13765.1| U2 snRNP component prp10, putative [Pediculus humanus corporis]
Length = 1336
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 94/228 (41%), Gaps = 43/228 (18%)
Query: 522 RGRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETP-MHPSR- 579
RGR V+ VE+ K +T D + +TP + GSETP P +
Sbjct: 201 RGRWDQVQD----VEVAPSKKKITATFFDKDDATPAHAKWDETPGHPKGSETPGATPGQS 256
Query: 580 ------TPLHPY---MTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGS 630
TP H TP R+ TP H+ + R+R W+ +P + G+
Sbjct: 257 TRMWDATPGHATPGAATPGRE---TPGHEKGASSRRNR-WDE----TPKTERETPGHNSG 308
Query: 631 WGTSPQY-QPGSPPSRAYEAPTPG-----SGWASTPGGNYSDAGTPRDSSSTYVNAPSPY 684
W +P+ + G+ E PTP S W TPG TP ++ + P+
Sbjct: 309 WAETPRTDRTGTTGELIEETPTPSASKRRSRWDETPGAQL----TPSLTTPGGLATPAGL 364
Query: 685 LPSTPGGQPMTPNSAS---YLPGTP---GGQPM---TPGTGGLDAMSP 723
P TP G P+TP+ A+ PGT G + M TP G L AM+P
Sbjct: 365 TPQTP-GTPITPHGATPSMMTPGTATPTGAKAMAMATPTPGHLAAMTP 411
>gi|333910724|ref|YP_004484457.1| NusG antitermination factor [Methanotorris igneus Kol 5]
gi|333751313|gb|AEF96392.1| NusG antitermination factor [Methanotorris igneus Kol 5]
Length = 146
Score = 43.1 bits (100), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 11 LQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVP----IREMTDVLAVE 66
L + S++A ++LK YI +EA+ V+E +G + +VP I E+ +L
Sbjct: 28 LDVYSILATENLKGYILVEAENRGVVEELVRGAFKVKG----IVPGTTSIDELEHLLTPR 83
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKL 106
D+ + V + G +KG+ A+V+ VD ++ +T++L
Sbjct: 84 KLVEDIEKGDLVELVAGPFKGERARVIRVDKHKEEITIEL 123
>gi|20094259|ref|NP_614106.1| transcription antitermination protein NusG [Methanopyrus kandleri
AV19]
gi|19887296|gb|AAM02036.1| Transcription antiterminator NusG [Methanopyrus kandleri AV19]
Length = 163
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 63/113 (55%), Gaps = 13/113 (11%)
Query: 2 QKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIY-----SQKVMLVPI 56
+K ++G E +++VIA + L+ Y+ IE V+E LR++ ++ ++ P+
Sbjct: 32 RKVKEEGIETGLKAVIAPEELRGYVIIE------VEELTDELRDLIHDLPDTRGIVEKPM 85
Query: 57 --REMTDVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
E+ A + +A+++S V + G +KG+ A+VV VD R+ +TV+L+
Sbjct: 86 DFEEIEHYFAPKPEAVEISEGDVVEILSGPFKGEKARVVSVDESRREITVELL 138
>gi|223478648|ref|YP_002582908.1| transcription antitermination protein NusG [Thermococcus sp. AM4]
gi|214033874|gb|EEB74700.1| transcription antitermination protein NusG [Thermococcus sp. AM4]
Length = 152
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K L + +++A +K YI++EA ++ V EA KG+R+ V E+ L +
Sbjct: 28 KTYNLPVYAILAPSKVKGYIFVEAPSKSAVDEAIKGIRHARGTLPGEVRFEEIEHFLEEK 87
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
V + G +KG+ AKVV VD + + V+LI
Sbjct: 88 PAVSGFEPGDIVELISGPFKGEKAKVVRVDESKDEIVVELI 128
>gi|315229956|ref|YP_004070392.1| NusG-like transcription antitermination protein [Thermococcus
barophilus MP]
gi|315182984|gb|ADT83169.1| NusG-like transcription antitermination protein [Thermococcus
barophilus MP]
Length = 152
Score = 42.7 bits (99), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K L I +++ +K YI+IEA ++ V EA +G+R+ V E+ L +
Sbjct: 28 KTYNLPIYAILTPSKVKGYIFIEAPSKSAVDEAIRGIRHARGTLPGEVAFSEIEHFLEEK 87
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
V + G +KG+ AKV+ VD + + V+LI
Sbjct: 88 PAVSGFEPGDIVELIAGPFKGEKAKVIRVDEAKDEIVVELI 128
>gi|167045425|gb|ABZ10080.1| putative KOW motif protein [uncultured marine crenarchaeote
HF4000_APKG10F15]
Length = 129
Score = 42.7 bits (99), Expect = 0.81, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 53/101 (52%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K ++ I+SV+ L LK Y+ +EA + + +A +G+R+I Q + E+ L +
Sbjct: 9 KMEKINIQSVLLLSDLKGYVVVEAQDVSAMFDAIQGIRHIRGQLRGELTYNEIDKYLIKK 68
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
S +L+ + V + G +KG A + ++ ++ TV L+
Sbjct: 69 STVSELAVENTVEIIAGPFKGMKATITRLEKEKEEATVILL 109
>gi|405120884|gb|AFR95654.1| DNA-directed RNA polymerase II largest subunit [Cryptococcus
neoformans var. grubii H99]
Length = 1786
Score = 42.7 bits (99), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 611 NPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDA 667
+PY+P SP + +P TSPQY P SP P+ +PT S ++P A
Sbjct: 1643 SPYSPTSPA---YSPTSPMGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSPAP--FQA 1697
Query: 668 GTPRDSSSTYVNAPSP--YLPSTPGGQP----MTPNSASYLPGTPGGQPMTPGTGG 717
+PR S ++ +P+ Y P++P P +P S +Y P +P P +P GG
Sbjct: 1698 TSPRYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPTYGG 1753
>gi|169601108|ref|XP_001793976.1| hypothetical protein SNOG_03409 [Phaeosphaeria nodorum SN15]
gi|111067494|gb|EAT88614.1| hypothetical protein SNOG_03409 [Phaeosphaeria nodorum SN15]
Length = 264
Score = 42.4 bits (98), Expect = 0.95, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 61/179 (34%), Gaps = 20/179 (11%)
Query: 560 PYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPP 619
P P MG P P P P M+ + A A+P P D+ P PM PP
Sbjct: 7 PSVSDPDADMGDSPPSSPRFLPPQPGMSQVPPAYASPYPHPF-APQGDQGQGP--PMHPP 63
Query: 620 RDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDA--GTPRDSSSTY 677
+ P Q PP R PGG Y TP S+S+Y
Sbjct: 64 FTHLPTHIVRQNPYGPLPQSLQPPDRMLPPDHNLCATQGQPGGTYFQGYGQTPTPSASSY 123
Query: 678 VNAPSPY------LPSTPGG-------QPMTPNSASYLPGTPGGQPMTPGTGGLDAMSP 723
N P+P+ +P PG P+T AS LP P P +G P
Sbjct: 124 HNTPAPHAVEGDDIPWAPGHGEVRRFVAPLTDEQASQLP--QAASPYPPASGNPTGGGP 180
>gi|194389262|dbj|BAG65619.1| unnamed protein product [Homo sapiens]
Length = 1935
Score = 42.4 bits (98), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 49/122 (40%), Gaps = 14/122 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
YTP SP + +P TSP+Y P P Y TP S S TP
Sbjct: 1818 YTPTSP---KFSPTSPKYSPTSPKYSPTGP---TYSPTTPKYSPTSPTYSPTSPVYTPTS 1871
Query: 673 -----SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPVIGA 727
+S TY Y P++P P +P ++Y P +PG P +P SP I
Sbjct: 1872 PKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP---TYSLTSPAISP 1928
Query: 728 DN 729
D+
Sbjct: 1929 DD 1930
>gi|145351142|ref|XP_001419944.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580177|gb|ABO98237.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1646
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 63/159 (39%), Gaps = 37/159 (23%)
Query: 591 DAGATPIHDGMRTPMRDRA--WNPYTP---MSP-----PRDN------WEDG-------N 627
D TP H GM TP RD W +P +SP P D + DG +
Sbjct: 1457 DGSRTPGHGGMMTPGRDGTPGWGSKSPSFLLSPGGHQSPFDTSMAFSPYSDGMAFSPGMS 1516
Query: 628 PGSWG----TSPQYQPGSPP----SRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVN 679
PG +G TSP Y P SP S AY +P S S A +P +S Y
Sbjct: 1517 PGGFGGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP--TSPAYSP 1574
Query: 680 APSPYLPSTPGGQP----MTPNSASYLPGTPGGQPMTPG 714
Y P++P P +P S +Y P +P P +P
Sbjct: 1575 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1613
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 67/167 (40%), Gaps = 19/167 (11%)
Query: 559 TPYRD-TPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTP--MRDRAWNPYTP 615
TP RD TP +G S + + P+ T M +P DGM M + Y+P
Sbjct: 1469 TPGRDGTPGWGSKSPSFLLSPGGHQSPFDTSM---AFSPYSDGMAFSPGMSPGGFGGYSP 1525
Query: 616 MSPPRDNWEDGNPGSWGTSPQYQPGSPP----SRAYEAPTPGSGWASTPGGNYSDAGTPR 671
SP + +P TSP Y P SP S AY +P S S A +P
Sbjct: 1526 TSPA---YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP- 1581
Query: 672 DSSSTYVNAPSPYLPSTPGGQP----MTPNSASYLPGTPGGQPMTPG 714
+S Y Y P++P P +P S +Y P +P P +P
Sbjct: 1582 -TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1627
>gi|427777531|gb|JAA54217.1| Putative rna polymerase i large subunit [Rhipicephalus pulchellus]
Length = 1941
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
Y+P SP + +P TSPQY P SP +P S S YS
Sbjct: 1840 YSPTSP---TYTPSSPKYSPTSPQYSPTSPQY------SPTSPKYSPTSPKYSP------ 1884
Query: 673 SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTP 713
+S TY Y P++P P +P +SY P +PG P +P
Sbjct: 1885 TSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGYSPSSP 1925
>gi|303272485|ref|XP_003055604.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463578|gb|EEH60856.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1694
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 69/176 (39%), Gaps = 39/176 (22%)
Query: 558 STPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTP-- 615
+TP R T G+GS +P ++P A A+P D MR ++PYT
Sbjct: 1475 TTPARGTTPGGVGSASPSF--------LLSP--QAHASPFDDTMR-------FSPYTEGG 1517
Query: 616 ----------MSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYE--APTPGSGWASTPGGN 663
SP + +P TSP Y P SP AY +P P S S
Sbjct: 1518 GGGGGGDGMGFSPTSPGYSPTSPAYSPTSPAYSPTSP---AYSPTSPAPTSPAYSPTSPA 1574
Query: 664 YSDAGTPRDSSSTYVNAPSP-YLPSTPGGQP----MTPNSASYLPGTPGGQPMTPG 714
YS +S + SP Y P++P P +P S +Y P +P P +P
Sbjct: 1575 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1630
>gi|255941856|ref|XP_002561697.1| Pc16g13990 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586320|emb|CAP94069.1| Pc16g13990 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1733
Score = 42.4 bits (98), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 56/125 (44%), Gaps = 17/125 (13%)
Query: 609 AWNPYTPM----SPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPG 661
A++P +P SP ++ +PG TSP Y P SP P+ +PT S ++P
Sbjct: 1609 AYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPA 1668
Query: 662 GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPGTGGLD 719
G R S T +P Y P++PG P +P SY P +P G P +P +
Sbjct: 1669 -----IGGARHLSPTSPTSPK-YTPTSPGWSPTSPQ--SYSPTSPNFSGSPTSPTSPAYS 1720
Query: 720 AMSPV 724
SP
Sbjct: 1721 PTSPA 1725
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 13/108 (12%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
++P SP ++ +P TSP Y SP S +Y +PG S NYS
Sbjct: 1596 FSPASP---TFQPTSPAYSPTSPAYGQASPTSPSYSPTSPG---FSPTSPNYSPTSPSFS 1649
Query: 673 SSSTYVNAPSP-YLPSTP--GG----QPMTPNSASYLPGTPGGQPMTP 713
+S + SP Y P++P GG P +P S Y P +PG P +P
Sbjct: 1650 PASPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSP 1697
>gi|393219057|gb|EJD04545.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Fomitiporia mediterranea MF3/22]
Length = 1782
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 17/125 (13%)
Query: 564 TPRYG--MGSETPMHPSRTPLHPYMTPM--RDAGATPIHDGMRTPMRDRAWNPYTPMSPP 619
+PRY S +P P +P P +P R + +P+H +P ++P +P SP
Sbjct: 1667 SPRYSPQSPSFSPTSPRYSPTSPSFSPASPRYSPTSPVHQSPTSP----KYSPTSPQSPA 1722
Query: 620 RDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWA-STPGGNYS-DAGTPRDSSSTY 677
+ +P TSP Y P SP AY +P W+ S+P N + GT R S+ Y
Sbjct: 1723 SPKYSPTSPAYSPTSPTYSPASP---AYSPTSP--QWSPSSPAQNSNMQNGTTRHSA--Y 1775
Query: 678 VNAPS 682
+PS
Sbjct: 1776 STSPS 1780
>gi|321464303|gb|EFX75312.1| hypothetical protein DAPPUDRAFT_306846 [Daphnia pulex]
Length = 1895
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 609 AWNPYTP-MSPPRDNWEDGNPGSWGTSPQYQPGSPP-SRAYEAPTPGSGWASTPGGNYSD 666
A++P +P SP ++ G+P SP+Y P SP S A +P S S YS
Sbjct: 1751 AYSPSSPKYSPTSPSYSPGSPQYTPASPKYSPTSPTYSPTSPAYSPSSPKYSPTSPRYSP 1810
Query: 667 AGTPRDS--SSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTP 713
A +P+ S S +Y A Y PS+P P +P SY P +P P +P
Sbjct: 1811 A-SPKYSPTSPSYSPASPAYSPSSPNYSPTSP---SYSPASPKYSPTSP 1855
Score = 41.2 bits (95), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 61/142 (42%), Gaps = 29/142 (20%)
Query: 564 TPRYGMGS--ETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTP-MSPPR 620
+P Y GS TP P +P P +P +P A++P +P SP
Sbjct: 1763 SPSYSPGSPQYTPASPKYSPTSPTYSP-----TSP------------AYSPSSPKYSPTS 1805
Query: 621 DNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDS--SSTYV 678
+ +P TSP Y P SP A +P S S +YS A +P+ S S TY
Sbjct: 1806 PRYSPASPKYSPTSPSYSPASP------AYSPSSPNYSPTSPSYSPA-SPKYSPTSPTYS 1858
Query: 679 NAPSPYLPSTPGGQPMTPNSAS 700
AP+ Y P++P P +P S
Sbjct: 1859 PAPTGYSPTSPSYSPTSPTYES 1880
>gi|328711807|ref|XP_001946059.2| PREDICTED: splicing factor 3B subunit 1-like isoform 1
[Acyrthosiphon pisum]
Length = 1349
Score = 42.0 bits (97), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 73/182 (40%), Gaps = 40/182 (21%)
Query: 558 STPYRDTPRYGMG--SETPMHPSRTPLHPYMTP---MRDAGATPIHD----GMRTPMRDR 608
STP+ +TP+ G+ ETP P TP R ATP H G TP RD
Sbjct: 214 STPWEETPKGGLSRWDETPGPTKMGAETPGATPGQSTRMWDATPGHTTPAAGAATPGRDT 273
Query: 609 AWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPG--SGWASTPGGN--- 663
+ + R N D P + E TPG SGWA TP +
Sbjct: 274 PGHIGATQTSVRRNRWDETPKT-----------------ERATPGHNSGWAETPRTDRGG 316
Query: 664 ---YSDAGTPRDSS--STYVNAPSPYLPS-TPGGQPMTPNSASYLPG-TPGGQPMTPGTG 716
D TP S S + PS PS TPG +TP +A+ G TP G MTP G
Sbjct: 317 IDLIQDTPTPSASKRRSRWDETPSQMTPSATPGS--LTPGAATPKVGVTPSGASMTPTPG 374
Query: 717 GL 718
G+
Sbjct: 375 GM 376
>gi|449303065|gb|EMC99073.1| hypothetical protein BAUCODRAFT_85149 [Baudoinia compniacensis UAMH
10762]
Length = 1789
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 13/168 (7%)
Query: 544 VTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGAT--PIHDGM 601
+ +D+ M+ V + R MG+ +PM + TP + +P+ + G P +
Sbjct: 1478 ILLDQEMLK---TVVSAQRPIGAAAMGAASPMDGAATP-YDMGSPLAEGGYAGGPDYSAS 1533
Query: 602 RTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPG 661
+P+ D ++ + +P S G SP Y P SP S +PG G++ T
Sbjct: 1534 FSPIIDAGQADSGGLTGYGGGFGGASPYSGGMSPGYAPTSPFSSGMSPTSPGYGYSPTSP 1593
Query: 662 GNYSDAGTPRDSSST---YVNAPSPYLPSTPGGQPMTPNSASYLPGTP 706
YS D +++ +V +P + P++P TP S +Y P +P
Sbjct: 1594 AGYSPTSPGFDGATSPVYHVTSPR-FSPASPA---YTPTSPTYSPTSP 1637
>gi|353235719|emb|CCA67728.1| probable RPO21-DNA-directed RNA polymerase II, 215 KD subunit
[Piriformospora indica DSM 11827]
Length = 1796
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 70/177 (39%), Gaps = 29/177 (16%)
Query: 573 TPMHPSRTPLHPY------MTPMRDAGATPIHDGMRTPMRDRAWNP------YTPMSPPR 620
+P P+ T + PY +P +P D R A++P Y+P SP
Sbjct: 1568 SPTSPNITAMSPYHHMAGATSPFSPMQQSPWFDRTRASATSPAYSPGMTSPGYSPTSP-- 1625
Query: 621 DNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPT-----PGSGWASTPGGNYSDAGTPRD 672
+ +PG TSP Y P SP P+ +PT P S S YS
Sbjct: 1626 -RYSPTSPGYSPTSPVYSPTSPKYSPTSPKYSPTSPRYSPTSPKYSPTSPRYSPTSPTYS 1684
Query: 673 SSSTYVNAPSP-YLPSTPGGQP----MTPNSASYLPGTPGGQPMTPGT-GGLDAMSP 723
+S + + SP Y P++P P +P S Y P +P P +P G+ SP
Sbjct: 1685 PTSPHYSPTSPKYSPTSPRYSPTSPKYSPTSPRYSPTSPQYSPTSPARPAGMSPASP 1741
>gi|241301792|ref|XP_002407502.1| DNA-directed RNA polymerase II largest subunit, putative [Ixodes
scapularis]
gi|215497181|gb|EEC06675.1| DNA-directed RNA polymerase II largest subunit, putative [Ixodes
scapularis]
Length = 1937
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 15/101 (14%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
Y+P SP + +P TSPQY P SP +P S S YS
Sbjct: 1845 YSPTSP---TYTPSSPKYSPTSPQYSPTSPQY------SPTSPKYSPTSPKYSP------ 1889
Query: 673 SSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTP 713
+S TY Y P++P P +P +SY P +PG P +P
Sbjct: 1890 TSPTYSPTSPKYSPTSPTYSPTSPKGSSYSPTSPGYSPSSP 1930
>gi|116754720|ref|YP_843838.1| transcription antitermination protein NusG [Methanosaeta
thermophila PT]
gi|116666171|gb|ABK15198.1| LSU ribosomal protein L24A [Methanosaeta thermophila PT]
Length = 153
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%)
Query: 5 IDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLA 64
+ + +L IR+++ D LK Y+ +EA V++A +G+ + S E+ L
Sbjct: 26 VARKEKLDIRAILVPDVLKGYVLVEASAPEIVEQAIQGVPHARSVIKGASSFAEIEHFLT 85
Query: 65 VESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKL 106
+ + +S V + G +KG++A+V VD ++ +TV+L
Sbjct: 86 PKPAVVGISEGAIVELISGPFKGEMARVKRVDIAKEEITVEL 127
>gi|409051067|gb|EKM60543.1| hypothetical protein PHACADRAFT_246551 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1753
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 74/180 (41%), Gaps = 26/180 (14%)
Query: 560 PYRDTPRYGMGSETPMHPSRTP--------LHPYMTPMRDAGAT-PIHDG--MRTPMRDR 608
P+ +P G GS +P P +P PY+ AGAT P +P DR
Sbjct: 1540 PFGQSP-MGAGSMSPAAPGYSPSSPNVYSPTSPYVPQSPFAGATSPFGTSPYATSPFYDR 1598
Query: 609 AWNPYTP-MSPPRDNWEDGNPGSWGTSPQYQPGSP------PSRAYEAPT--PGSGWAST 659
+ P +P SP +PG TSP+Y P SP P + ++P+ P S S
Sbjct: 1599 SRGPTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSP 1658
Query: 660 PGGNYSDAGTPRDSSSTYVNAP-----SPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG 714
++S A +S +P SP P +P +P S +Y P +P P +P
Sbjct: 1659 TSPSFSPASPRYSPTSPAQMSPASPKYSPTSPVSPASPKYSPTSPTYSPASPAYSPASPA 1718
>gi|428671620|gb|EKX72538.1| DNA-directed RNA polymerase II largest subunit, putative [Babesia
equi]
Length = 1733
Score = 41.6 bits (96), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 67/159 (42%), Gaps = 26/159 (16%)
Query: 564 TPRYGMGSET-----PMHPSRTPLHPYMTPMRDAGA--TPIHDGMRTPMRDRAWNPYTP- 615
+P Y S T P P+ +P P +P A + +P + A++P +P
Sbjct: 1571 SPAYSPASPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP-----AYSPTSPA 1625
Query: 616 MSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSS 675
SP + +P TSP Y P SP AY +P G++ T S A +P +S
Sbjct: 1626 YSPTSPAYSPTSPAYSPTSPAYSPTSP---AYSPTSPKIGYSPT-----SPAYSP--TSP 1675
Query: 676 TYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG 714
Y Y P++P P +P +Y P +P P +P
Sbjct: 1676 AYSPTSPAYSPTSPAYSPTSP---AYSPTSPAYSPTSPN 1711
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 16/165 (9%)
Query: 556 VVSTPYRDT-PRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYT 614
V TP T P Y S P+ P+ +P P T + +P + A++P +
Sbjct: 1550 TVQTPRSPTSPGYAPLSPNPLSPAYSPASP--TSPAYSPTSPAYSPTSP-----AYSPTS 1602
Query: 615 P-MSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDS 673
P SP + +P TSP Y P SP AY +P S S A +P
Sbjct: 1603 PAYSPTSPAYSPTSPAYSPTSPAYSPTSP---AYSPTSPAYSPTSPAYSPTSPAYSPTSP 1659
Query: 674 SSTYVNAPSPYLPSTPGGQP----MTPNSASYLPGTPGGQPMTPG 714
Y Y P++P P +P S +Y P +P P +P
Sbjct: 1660 KIGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPA 1704
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 88/242 (36%), Gaps = 39/242 (16%)
Query: 501 GGHDALVGTTVKVRLGPYKGYRGRVVDV---------KGQSVRVELESQMKVVTVDRSMI 551
G D L G T V +G Y D+ Q++++ +S M S +
Sbjct: 1434 GEVDQLKGITENVIMGQLCPYGTGCFDIMIDEAKLRDANQNLQMVPDSAMSGFISPDSSL 1493
Query: 552 SDNVVVS--------TPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRT 603
S NV +S +P +P Y +P+ + +P M A ++T
Sbjct: 1494 SPNVSMSPGKINSMLSPLPFSPSYAALMISPVVAANSPSFGSMNIDTSALGGSFSPTVQT 1553
Query: 604 PMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGN 663
P R Y P+SP NP SP Y P SP S AY +P S
Sbjct: 1554 P-RSPTSPGYAPLSP--------NP----LSPAYSPASPTSPAYSPTSPAYSPTSPAYSP 1600
Query: 664 YSDAGTPRD-----SSSTYVNAPSPYLPSTPGGQP----MTPNSASYLPGTPGGQPMTPG 714
S A +P +S Y Y P++P P +P S +Y P +P P +P
Sbjct: 1601 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPK 1660
Query: 715 TG 716
G
Sbjct: 1661 IG 1662
>gi|422727796|gb|AFX61755.2| RNA polymerase I largest subunit, partial [Ascosphaera torchioi]
Length = 1651
Score = 41.6 bits (96), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 69/156 (44%), Gaps = 29/156 (18%)
Query: 564 TPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNW 623
+PR MGS PS +P P P A +P G R + +P SP N+
Sbjct: 1510 SPR-AMGS-----PSFSPASPTFVPASPA-YSPTSPGFRAGV--------SPTSP---NY 1551
Query: 624 EDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNA 680
+PG +SP Y P SP P+ +PT + ++P S T R S T +
Sbjct: 1552 SPTSPGFSPSSPNYSPTSPSFSPASPIFSPTSPTYSPTSPALGPS---TGRHLSPTSPTS 1608
Query: 681 PSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPG 714
P Y P++PG P +P +Y P +P G P +PG
Sbjct: 1609 PK-YTPTSPGWSPTSPE--TYSPTSPNFAGSPTSPG 1641
>gi|67517057|ref|XP_658413.1| hypothetical protein AN0809.2 [Aspergillus nidulans FGSC A4]
gi|40746483|gb|EAA65639.1| hypothetical protein AN0809.2 [Aspergillus nidulans FGSC A4]
gi|259488909|tpe|CBF88741.1| TPA: DNA-directed RNA polymerase Fragment (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q873Q6] [Aspergillus
nidulans FGSC A4]
Length = 1745
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
++P SP ++ +P TSP Y SP S +Y +PG S NYS
Sbjct: 1605 FSPASP---SFAPTSPAYSPTSPAYGQASPTSPSYSPTSPG---FSPTSPNYSPTSPSFS 1658
Query: 673 SSSTYVNAPSP-YLPSTP--GG----QPMTPNSASYLPGTPGGQPMTPGT 715
+S + SP Y P++P GG P +P S Y P +PG P +P T
Sbjct: 1659 PTSPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQT 1708
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 609 AWNPYTPM----SPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPG 661
A++P +P SP ++ +PG TSP Y P SP P+ +PT S ++P
Sbjct: 1618 AYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTSPA 1677
Query: 662 GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPG 714
G R S T +P Y P++PG P +P +Y P +P G P +PG
Sbjct: 1678 -----IGGARHLSPTSPTSPK-YTPTSPGWSPTSPQ--TYSPTSPNFAGSPTSPG 1724
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 627 NPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP-YL 685
+PG SP + P SP AY +P G AS +YS +S + SP Y
Sbjct: 1602 SPGFSPASPSFAPTSP---AYSPTSPAYGQASPTSPSYS-------PTSPGFSPTSPNYS 1651
Query: 686 PSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGLDAMSPV 724
P++P P +P ++ P +P P +P GG +SP
Sbjct: 1652 PTSPSFSPTSP---AFSPTSPSYSPTSPAIGGARHLSPT 1687
>gi|358370099|dbj|GAA86711.1| DNA-dependent RNA polymerase II largest subunit [Aspergillus kawachii
IFO 4308]
Length = 1747
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 609 AWNPYTPM----SPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPG 661
A++P +P SP ++ +PG TSP Y P SP P+ +PT S ++P
Sbjct: 1619 AYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSP- 1677
Query: 662 GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPG 714
+ G R S T +P Y P++PG P +P +Y P +P G P +PG
Sbjct: 1678 ---AVGGVGRHLSPTSPTSPK-YTPTSPGWSPTSPQ--TYSPTSPNFAGSPTSPG 1726
>gi|119494984|ref|XP_001264289.1| DNA-dependent RNA polymerase II largest subunit, putative
[Neosartorya fischeri NRRL 181]
gi|119412451|gb|EAW22392.1| DNA-dependent RNA polymerase II largest subunit, putative
[Neosartorya fischeri NRRL 181]
Length = 1750
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 609 AWNPYTPM----SPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPG 661
A++P +P SP ++ +PG TSP Y P SP P+ +PT S ++P
Sbjct: 1619 AYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSP- 1677
Query: 662 GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPG 714
+ G R S T +P Y P++PG P +P +Y P +P G P +PG
Sbjct: 1678 ---AIGGAGRHLSPTSPTSPK-YTPTSPGWSPTSPQ--TYSPTSPNFAGSPTSPG 1726
>gi|145230824|ref|XP_001389676.1| DNA-directed RNA polymerase II subunit RPB1 [Aspergillus niger CBS
513.88]
gi|134055799|emb|CAK37321.1| unnamed protein product [Aspergillus niger]
Length = 1747
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 609 AWNPYTPM----SPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPG 661
A++P +P SP ++ +PG TSP Y P SP P+ +PT S ++P
Sbjct: 1619 AYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSP- 1677
Query: 662 GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPG 714
+ G R S T +P Y P++PG P +P +Y P +P G P +PG
Sbjct: 1678 ---AVGGVGRHLSPTSPTSPK-YTPTSPGWSPTSPQ--TYSPTSPNFAGSPTSPG 1726
>gi|70996164|ref|XP_752837.1| DNA-dependent RNA polymerase II largest subunit [Aspergillus
fumigatus Af293]
gi|66850472|gb|EAL90799.1| DNA-dependent RNA polymerase II largest subunit, putative
[Aspergillus fumigatus Af293]
gi|159131590|gb|EDP56703.1| DNA-dependent RNA polymerase II largest subunit, putative
[Aspergillus fumigatus A1163]
Length = 1750
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 609 AWNPYTPM----SPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPG 661
A++P +P SP ++ +PG TSP Y P SP P+ +PT S ++P
Sbjct: 1619 AYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSP- 1677
Query: 662 GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPG 714
+ G R S T +P Y P++PG P +P +Y P +P G P +PG
Sbjct: 1678 ---AIGGAGRHLSPTSPTSPK-YTPTSPGWSPTSPQ--TYSPTSPNFAGSPTSPG 1726
>gi|30984464|ref|NP_851896.1| large tegument protein [Macacine herpesvirus 1]
gi|30844278|gb|AAP41454.1| very large tegument protein [Macacine herpesvirus 1]
Length = 3288
Score = 41.6 bits (96), Expect = 2.1, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 46/125 (36%), Gaps = 18/125 (14%)
Query: 639 PGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNS 698
P P + + E PTP +G TP G P SS P TP G+P TP
Sbjct: 470 PAGPTTASSEPPTP-AGRPPTPAGRPPTPANPTASSE----------PPTPAGRPPTPAG 518
Query: 699 ASYLPGTP--GGQPMTPGTGGLDAMS-----PVIGADNEGPWFMPDILVRRSGEESVVGV 751
P P +P TP G A S P + +E D L R E G
Sbjct: 519 RPPTPANPTASSEPPTPNPEGAPAPSSNEQPPAAASTDEATQKALDALRDRQPPEPPCGS 578
Query: 752 IREVL 756
+ E+L
Sbjct: 579 LTELL 583
>gi|121701053|ref|XP_001268791.1| DNA-dependent RNA polymerase II largest subunit, putative
[Aspergillus clavatus NRRL 1]
gi|119396934|gb|EAW07365.1| DNA-dependent RNA polymerase II largest subunit, putative
[Aspergillus clavatus NRRL 1]
Length = 1765
Score = 41.6 bits (96), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 609 AWNPYTPM----SPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPG 661
A++P +P SP ++ +PG TSP Y P SP P+ +PT S ++P
Sbjct: 1626 AYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSP- 1684
Query: 662 GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPG 714
+ G R S T +P Y P++PG P +P +Y P +P G P +PG
Sbjct: 1685 ---AIGGAGRHLSPTSPTSPK-YTPTSPGWSPTSPQ--TYSPTSPNFAGSPTSPG 1733
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 57/132 (43%), Gaps = 32/132 (24%)
Query: 613 YTPMSP----PRDNWEDG---NPGSWGTSPQYQPGSPPSRAYEAPTPGSGWAS------- 658
Y+P++P PR N G +PG SP + P SP AY +P G AS
Sbjct: 1589 YSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPTSP---AYSPTSPAYGQASPTSPSYS 1645
Query: 659 --TPGG-----NYSDAGTPRDSSSTYVNAPSP-YLPSTP--GG-----QPMTPNSASYLP 703
+PG NYS +S + SP Y P++P GG P +P S Y P
Sbjct: 1646 PTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTP 1705
Query: 704 GTPGGQPMTPGT 715
+PG P +P T
Sbjct: 1706 TSPGWSPTSPQT 1717
>gi|350638666|gb|EHA27022.1| DNA-directed RNA polymerase II, largest subunit [Aspergillus niger
ATCC 1015]
Length = 1743
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 609 AWNPYTPM----SPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPG 661
A++P +P SP ++ +PG TSP Y P SP P+ +PT S ++P
Sbjct: 1619 AYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSP- 1677
Query: 662 GNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPG 714
+ G R S T +P Y P++PG P +P +Y P +P G P +PG
Sbjct: 1678 ---AVGGVGRHLSPTSPTSPK-YTPTSPGWSPTSPQ--TYSPTSPNFAGSPTSPG 1726
>gi|297603848|ref|NP_001054670.2| Os05g0151000 [Oryza sativa Japonica Group]
gi|222630225|gb|EEE62357.1| hypothetical protein OsJ_17146 [Oryza sativa Japonica Group]
gi|255676030|dbj|BAF16584.2| Os05g0151000 [Oryza sativa Japonica Group]
Length = 1834
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 31/223 (13%)
Query: 504 DALVGTTVKVRLGPYK--GYRGRVVDVKGQSVRVELESQM--KVVTVDRSMISDNV--VV 557
D L G + + LG G G + + Q ++ +E Q+ V +D M++ +
Sbjct: 1440 DPLRGVSENIMLGQLAPIGTGGCDLYLNDQMLKQAIELQLPSYVEGLDFGMMTSACSPIS 1499
Query: 558 STPYRD---TPRYGMGSETPMHPSRT--PLHPYMTPMRDAGATPIHD-GMRTPMRDRAWN 611
TPY +P Y + + P+ PY+ M +P+ G TP ++
Sbjct: 1500 GTPYHQGMMSPSYLLSPDIRASPTAADAQFSPYVGGM---AFSPVSSPGNYTPSSGGGYS 1556
Query: 612 PYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPR 671
P P+ P PGS+ +S Y P SP Y +P S ++P +Y P
Sbjct: 1557 PSPPVCTP-------GPGSFTSSSPYNPVSP---FYSPASPLSCPLTSP--SYVPTSLPH 1604
Query: 672 DSSSTYVNAPSP-YLPSTPGGQPMTPNSASYLPGTPGGQPMTP 713
+S +A SP Y PS+P +P S SY P +P P +P
Sbjct: 1605 SPTSPIYSATSPIYSPSSP---IYSPTSLSYSPTSPVYSPTSP 1644
>gi|295664232|ref|XP_002792668.1| DNA-directed RNA polymerase II subunit RPB1 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226278782|gb|EEH34348.1| DNA-directed RNA polymerase II subunit RPB1 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1748
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 68/168 (40%), Gaps = 32/168 (19%)
Query: 549 SMISDNVVVSTPYRDT---PRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPM 605
S + DN+ + TP D+ P GSETP Y P G +P G R+P
Sbjct: 1515 SPLQDNMYIGTPDPDSAFSPIRQAGSETPAG-----FTEYQAPGFSGGFSP--HGARSP- 1566
Query: 606 RDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYS 665
Y+P SP + TSP P PS Y +PG S P S
Sbjct: 1567 ----GGGYSPSSP------------FNTSPT-SPRYSPSSGYSPTSPGMSITS-PRFMSS 1608
Query: 666 DAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTP 713
+P +S + Y P++PG Q +P S SY P +PG P +P
Sbjct: 1609 PGFSP--ASPVFAPTSPAYSPTSPGYQ-QSPTSPSYSPTSPGFSPTSP 1653
Score = 41.2 bits (95), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 18/116 (15%)
Query: 609 AWNPYTP---MSPPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTP-- 660
A++P +P SP ++ +PG TSP Y P SP P+ +PT S ++P
Sbjct: 1624 AYSPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAL 1683
Query: 661 GGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTP--GGQPMTPG 714
GG+ T R S T +P Y P++PG P +P +Y P +P G P +PG
Sbjct: 1684 GGS-----TGRHLSPTSPTSPK-YTPTSPGWSPTSPE--TYSPTSPNFSGSPTSPG 1731
>gi|410670701|ref|YP_006923072.1| transcription antitermination protein NusG [Methanolobus
psychrophilus R15]
gi|409169829|gb|AFV23704.1| transcription antitermination protein NusG [Methanolobus
psychrophilus R15]
Length = 155
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
M + + L IR++IA D LK Y+ IEA + V++A + + + + I E++
Sbjct: 23 MITQVARKDHLDIRAIIAPDELKGYVLIEAPEPGVVEQAIQTVPHARTVVKGRSSIEEIS 82
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKL 106
L + ++ + + G +KG+ A+V VD + +TV+L
Sbjct: 83 HFLTPKPTVTGITEGAIIEITSGPFKGERARVKRVDEGHEEITVEL 128
>gi|147918706|ref|YP_687571.1| transcription antitermination protein NusG [Methanocella arvoryzae
MRE50]
gi|110622967|emb|CAJ38245.1| 50S ribosomal protein L26E [Methanocella arvoryzae MRE50]
Length = 164
Score = 41.2 bits (95), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 6/105 (5%)
Query: 5 IDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVML---VPIREMTD 61
+ + L IRSV+ + LK Y+ +E+ A + E C ++NI K ++ I E+
Sbjct: 35 VTRKENLDIRSVLVPEELKGYVLVESPM-AEIVEDC--IKNIPHAKAVVRGASSITEVQH 91
Query: 62 VLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKL 106
LA + +S V + G +KG+ A+V +D ++ +TV+L
Sbjct: 92 FLAPKPTVTGISEGDIVELTAGPFKGEKARVKRIDEAKEEITVEL 136
>gi|54291834|gb|AAV32202.1| putative RNA polymerase II [Oryza sativa Japonica Group]
Length = 1741
Score = 41.2 bits (95), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 31/223 (13%)
Query: 504 DALVGTTVKVRLGPYK--GYRGRVVDVKGQSVRVELESQM--KVVTVDRSMISDNV--VV 557
D L G + + LG G G + + Q ++ +E Q+ V +D M++ +
Sbjct: 1387 DPLRGVSENIMLGQLAPIGTGGCDLYLNDQMLKQAIELQLPSYVEGLDFGMMTSACSPIS 1446
Query: 558 STPYRD---TPRYGMGSETPMHPSRT--PLHPYMTPMRDAGATPIHD-GMRTPMRDRAWN 611
TPY +P Y + + P+ PY+ M +P+ G TP ++
Sbjct: 1447 GTPYHQGMMSPSYLLSPDIRASPTAADAQFSPYVGGM---AFSPVSSPGNYTPSSGGGYS 1503
Query: 612 PYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPR 671
P P+ P PGS+ +S Y P SP Y +P S ++P +Y P
Sbjct: 1504 PSPPVCTP-------GPGSFTSSSPYNPVSP---FYSPASPLSCPLTSP--SYVPTSLPH 1551
Query: 672 DSSSTYVNAPSP-YLPSTPGGQPMTPNSASYLPGTPGGQPMTP 713
+S +A SP Y PS+P +P S SY P +P P +P
Sbjct: 1552 SPTSPIYSATSPIYSPSSP---IYSPTSLSYSPTSPVYSPTSP 1591
>gi|324120524|dbj|BAJ78653.1| RNA polymerase II largest subunit [Ephemera japonica]
Length = 1660
Score = 40.8 bits (94), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 67/166 (40%), Gaps = 36/166 (21%)
Query: 570 GSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPG 629
GS TP + + P+MTP + G TP + +P P P P G+
Sbjct: 1508 GSATP-----SSMSPHMTPW-NQGGTPSYASAWSPGLGSGMTPGGPGFSP-----SGSSD 1556
Query: 630 SWGTSPQY------QPGSP-----PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYV 678
+ G SP Y QPGSP PS + P+P + NYS + +S +
Sbjct: 1557 ASGLSPNYSSAWSPQPGSPSASPGPSMSPYIPSPAGALSP----NYSPSSPAYAPASPSL 1612
Query: 679 NAPSP-YLPSTPGG---------QPMTPNSASYLPGTPGGQPMTPG 714
SP Y P++P P+ P S SY P +PG +PG
Sbjct: 1613 TPSSPNYSPTSPSCLTSPSYSPTSPIYPASPSYSPTSPGFSVASPG 1658
>gi|328849370|gb|EGF98552.1| hypothetical protein MELLADRAFT_50989 [Melampsora larici-populina
98AG31]
Length = 1786
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 64/153 (41%), Gaps = 19/153 (12%)
Query: 573 TPMHPSRTPLHPYMTPMRDAGATPIHD--GMRTPMRDRAWNPYTPMSPPRDNWEDGNPGS 630
TP P+ P+M G +P G+ +P A ++P SP N+ +P
Sbjct: 1581 TPTSPAWGGASPWMPSGTSPGYSPTSPRMGLTSPRFSPASPNFSPASP---NFSPASPAF 1637
Query: 631 WGTSPQYQPG----SPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSP-YL 685
TSP + P SP S Y A G G A++P YS SS + SP +
Sbjct: 1638 SPTSPSFSPASPRFSPSSPNYSA---GIGLATSP--RYSPTSPAMSPSSPKFSPASPAFS 1692
Query: 686 PSTPGGQPMT----PNSASYLPGTPGGQPMTPG 714
P++P P T P S ++ P +P P +P
Sbjct: 1693 PASPKYSPATQRWSPQSPAFSPASPKYSPASPA 1725
>gi|378729993|gb|EHY56452.1| DNA-directed RNA polymerase II subunit A [Exophiala dermatitidis
NIH/UT8656]
Length = 1762
Score = 40.4 bits (93), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 92/222 (41%), Gaps = 36/222 (16%)
Query: 523 GRVVDVKGQSVRVELESQMKVVTVDRSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPL 582
G + D +G S + L V T ++ D ++S D G+G + S+ L
Sbjct: 1433 GELDDCRGVSENLILGQVAPVGTGAMEILLDENMLSQVVSDNANLGLGGAIGVKGSQQLL 1492
Query: 583 H----PY--MTPMRDAG--ATPIHDGMRTPMRDRA-------------------WNPYTP 615
PY +PM+D G +P + +P+R ++PY
Sbjct: 1493 DGAATPYDMGSPMQDTGYLGSPDYGASFSPIRASGAETPGGFTDYQPGFGGAGGFSPYGA 1552
Query: 616 MSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPG-GNYSDAGTPRDSS 674
SP + +P GTSP PG P+ Y +P G A++PG G S + +P +S
Sbjct: 1553 RSP--GGYSPASPFG-GTSPT-SPGFSPTAGYSPTSPMFG-ATSPGFGPTSPSFSP--AS 1605
Query: 675 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTG 716
+ Y P++PG Q +P S SY P +P P +P G
Sbjct: 1606 PAFTPTSPAYSPTSPGYQ-ASPTSPSYSPTSPNYSPTSPAYG 1646
>gi|443926162|gb|ELU44885.1| AtMMH-1 [Rhizoctonia solani AG-1 IA]
Length = 726
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 65/157 (41%), Gaps = 34/157 (21%)
Query: 585 YMTPMRDAGATP-IHDGMRTPMRDRAWNP---YTPM--SPPRDNWEDG-NPGSWGTSPQY 637
Y P+ +TP + M P W+P YTP S + G NP G PQY
Sbjct: 105 YPAPIPGTTSTPRVITNMIKPAAQGVWSPGQGYTPAPASAAPGGYNTGYNPAVGGVQPQY 164
Query: 638 QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPN 697
PG TPG+G +P + A TP + +A P++ STPG TP
Sbjct: 165 -PG----------TPGTGAPYSPSPTSTYAATPVKPTVPLRSAIPPHVRSTPG----TPA 209
Query: 698 SAS-YLPGTPGGQPMTPGTGGLDAMSPVIGADNEGPW 733
S S YLPGT G P+ P +GA PW
Sbjct: 210 SPSTYLPGTGGHTPL-----------PAVGAAPYAPW 235
>gi|336477897|ref|YP_004617038.1| NusG antitermination factor [Methanosalsum zhilinae DSM 4017]
gi|335931278|gb|AEH61819.1| NusG antitermination factor [Methanosalsum zhilinae DSM 4017]
Length = 156
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 1 MQKCIDKGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMT 60
M I K L IRS++A D LK YI IE+ + + V++A + + + S + E+
Sbjct: 26 MLTQIAKKDRLDIRSILAPDELKGYILIESPRASIVEQAIQTVPHARSIVKGQSSLDEIM 85
Query: 61 DVLAVESKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKL 106
L + ++ + + G +KG+ A+V VD + +TV+L
Sbjct: 86 HFLTPKPTVTGITEGAIIEITSGPFKGEKARVKRVDEGHEEITVEL 131
>gi|71019559|ref|XP_760010.1| hypothetical protein UM03863.1 [Ustilago maydis 521]
gi|46099536|gb|EAK84769.1| hypothetical protein UM03863.1 [Ustilago maydis 521]
Length = 1774
Score = 40.4 bits (93), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 46/105 (43%), Gaps = 16/105 (15%)
Query: 613 YTPMSPPRDNWEDGNP-GSWG--TSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGT 669
Y+P SP + +P G +G TSPQY P SP + +P NYS A
Sbjct: 1624 YSPSSPAGAGYSPSSPAGRYGAATSPQYSPASP---KFSPTSP----------NYSPASP 1670
Query: 670 PRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG 714
+S + SP + GG+ +P S +Y P +P P +P
Sbjct: 1671 AYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTSPQYSPASPA 1715
>gi|13542274|ref|NP_111962.1| transcription antitermination protein NusG [Thermoplasma volcanium
GSS1]
gi|14325707|dbj|BAB60610.1| transcription termination-antitermination factor [nusG]
[Thermoplasma volcanium GSS1]
Length = 288
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 12 QIRSVIALDHLKNYIYIEA---DKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESK 68
++ +++A +K YI++E D+ +++ + +G + + S K+ L E+ L +
Sbjct: 174 EVFAIMAPYEIKGYIFVETMHPDRISYLAKDIRGYKGMVSGKIDL---EEIAHYLTPKPA 230
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
L + V + G +KG+ AK++ +D+V++ VTV+L+
Sbjct: 231 VSGLELGSLVELVEGPFKGEKAKIISIDSVKEEVTVQLV 269
>gi|340344249|ref|ZP_08667381.1| NusG antitermination factor [Candidatus Nitrosoarchaeum koreensis
MY1]
gi|339519390|gb|EGP93113.1| NusG antitermination factor [Candidatus Nitrosoarchaeum koreensis
MY1]
Length = 152
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 53/99 (53%)
Query: 9 SELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESK 68
+++ I+SV+ +D+LK Y+ IEA + A +G+R+I Q + +++ L +S
Sbjct: 33 NKMNIQSVLLVDNLKGYVVIEAINPSDAYMAVEGIRHIRGQLRGELEFKDIEGYLVKKST 92
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
L+ D V + G +KG A + +D ++ TV L+
Sbjct: 93 VSQLTVDNIVEITGGPFKGMKATITRIDVDKEEATVVLL 131
>gi|68366436|ref|XP_684311.1| PREDICTED: splicing factor 3B subunit 1 isoform 1 [Danio rerio]
Length = 1315
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 72/185 (38%), Gaps = 51/185 (27%)
Query: 570 GSETPMH-PSRTPLHPYM--TPMR-----DAGATPIHDGMRTPMRDRAWNP---YTPM-- 616
GSETP H P TP + TP R GATP R W P +TP
Sbjct: 227 GSETPGHTPGHTPSNSRWDETPGRPKGSETPGATP---------STRMWEPTPSHTPAGA 277
Query: 617 -SPPRDNWEDGNPGSWGTSPQYQPG---SPPSRAYEAPTPGSGWASTP---GGNYSDAGT 669
+P RD PG G + + P E P GSGWA TP G+ S T
Sbjct: 278 ATPGRDTPGHATPGHGGATSSVRKNRWDETPKTERETPGHGSGWAETPRTDRGDESVGET 337
Query: 670 PR-----------DSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPGTGGL 718
P ++ ++ + + +P L TPG P+ GTP TP G L
Sbjct: 338 PTPGASKRKSRWDETPASQMGSSTPLL--TPGKTPL---------GTPAMNMATPTPGHL 386
Query: 719 DAMSP 723
+M+P
Sbjct: 387 MSMTP 391
>gi|324120564|dbj|BAJ78673.1| RNA polymerase II largest subunit [Bemisia tabaci]
Length = 1793
Score = 40.4 bits (93), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 57/141 (40%), Gaps = 36/141 (25%)
Query: 582 LHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGS 641
+ P MTP + GATP + + +P P P P G+ + G SP Y
Sbjct: 1504 MSPQMTPW-NVGATPGYGSVWSPAVGSGMTPGGPNFSP-----SGSSDASGMSPGY---- 1553
Query: 642 PPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPS-----PYLPSTPGGQP--- 693
W+ TPG G+P + S ++ +P+ Y PS+P P
Sbjct: 1554 -------------AWSPTPGS----PGSPGPAMSPFIPSPASGMSQSYSPSSPAYAPTSP 1596
Query: 694 -MTPNSASYLPGTPGGQPMTP 713
MTP S +Y P +P P +P
Sbjct: 1597 SMTPTSPNYSPTSPSYSPTSP 1617
>gi|432953481|ref|XP_004085416.1| PREDICTED: splicing factor 3B subunit 1-like [Oryzias latipes]
Length = 1314
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 78/209 (37%), Gaps = 58/209 (27%)
Query: 553 DNVVVSTPYRDTPR-------YGMGSETPMH-PSRTPLHPYM--TPMR-----DAGATPI 597
D TP TP+ G+ETP H P+ TP + TP R GATP
Sbjct: 202 DQTADQTPSNSTPKKVSSWDQADAGAETPGHTPAHTPSNSRWDETPGRPKGSETPGATP- 260
Query: 598 HDGMRTPMRDRAWNP---YTPM---SPPRDNWEDGNPGSWGTSPQYQPG---SPPSRAYE 648
R W+P +TP +P RD PG G + + P E
Sbjct: 261 --------SSRMWDPTPSHTPAGAATPGRDTPGHATPGHGGATGSVRKNRWDETPKTERE 312
Query: 649 APTPGSGWASTP---GGNYSDAGTPRDSSS-----------TYVNAPSPYLPSTPGGQPM 694
P GSGWA TP G S TP +S + + + +P L TPG P+
Sbjct: 313 TPGHGSGWAETPRTDRGEESVGETPTPGASKRKSRWDLTPASQMGSSTPLL--TPGKTPL 370
Query: 695 TPNSASYLPGTPGGQPMTPGTGGLDAMSP 723
GTP TP G L +M+P
Sbjct: 371 ---------GTPAMNMATPTPGHLMSMTP 390
>gi|324501099|gb|ADY40494.1| Splicing factor 3B subunit 1 [Ascaris suum]
Length = 1352
Score = 40.0 bits (92), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 66/175 (37%), Gaps = 26/175 (14%)
Query: 548 RSMISDNVVVSTPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRD 607
R I+ + + TPR ETP H S TPM A A +TP R+
Sbjct: 231 RISITSTISAAAAEVATPRVARWDETPAHASGVD----ATPMSGAKAWDATPTTQTPRRN 286
Query: 608 RAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAY------EAPTPG---SGW-- 656
R W+ TP RD G G +P + +P + E P+ S W
Sbjct: 287 R-WDE-TPRESVRDGMTPGGMTPGGMTPGWGAETPRDTRFDDVKVEETPSESKRRSRWDL 344
Query: 657 ---ASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGG 708
A+TP A TP + PS + PST G MTP+ TPGG
Sbjct: 345 TPSAATPATPAGGAATPSTAQMAGATTPSGFTPSTVVGG-MTPSMM-----TPGG 393
>gi|302927295|ref|XP_003054466.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735407|gb|EEU48753.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1750
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 23/114 (20%)
Query: 626 GNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNA----- 680
+P +SP Y P SP S + +PT + + S NYS A +S ++A
Sbjct: 1623 ASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTS 1682
Query: 681 --------------PSPYLPSTPG----GQPMTPNSASYLPGTPGGQPMTPGTG 716
P Y P++P G +P S SY P +P P TPG G
Sbjct: 1683 PSYSPASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTSPAFSPRTPGPG 1736
>gi|395326417|gb|EJF58827.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Dichomitus squalens LYAD-421 SS1]
Length = 1749
Score = 40.0 bits (92), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 67/160 (41%), Gaps = 13/160 (8%)
Query: 558 STPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMS 617
++PY + G+ +PM S P+ R GAT +P + Y+P S
Sbjct: 1566 TSPYLAQSPFA-GATSPMGTSPYATSPFYD--RSHGATSPTYSPTSPALNLTSPGYSPTS 1622
Query: 618 PPRDNWEDGNPGSWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSS 674
P + +P TSP+Y P SP P+ +PT S ++P + + +S
Sbjct: 1623 P---RYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPRYSPTSPAQMSPTS 1679
Query: 675 STYVNAPSPYLPSTPGGQPMTPNSASYLPGTPGGQPMTPG 714
Y SP P++P +P S +Y P +P P +P
Sbjct: 1680 PKY----SPTSPTSPASPRYSPTSPAYSPTSPAYSPASPA 1715
>gi|16082397|ref|NP_394879.1| transcription antitermination protein NusG [Thermoplasma
acidophilum DSM 1728]
gi|10640767|emb|CAC12545.1| probable transcription termination-antitermination factor related
protein [Thermoplasma acidophilum]
Length = 299
Score = 39.7 bits (91), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 12 QIRSVIALDHLKNYIYIEA---DKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVESK 68
++ +++A +K YI++E D+ +++ +G + + S K+ L E+ L +
Sbjct: 185 EVYAIMAPYEIKGYIFVETMHPDRISYLARDIRGYKGMVSGKIDL---EEIAHYLTPKPA 241
Query: 69 AIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
L + V + G +KG+ AK++ +D+V++ VTV+L+
Sbjct: 242 VSGLELGSLVELVEGPFKGEKAKIISIDSVKEEVTVQLV 280
>gi|324500036|gb|ADY40031.1| DNA-directed RNA polymerase II subunit RPB1 [Ascaris suum]
Length = 1840
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 93/235 (39%), Gaps = 50/235 (21%)
Query: 503 HDALVGTTVKVRLGPYK----GYRGRVVDVKGQSVRVELESQMKVVTVDRSM-ISDNVVV 557
D + G + + LG G ++DV+ ++L+ + RS+ +S N
Sbjct: 1460 QDFIKGVSENIMLGQLARGGTGCFDLLIDVENCKQGMQLQPACPLSASTRSLWLSGNSPA 1519
Query: 558 STPYRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMS 617
++ TP Y SE P+ TP TP + I +G +P W+P +P+
Sbjct: 1520 ASRAMVTPAYA--SERSCTPNITPTSAVFTP------SGISEGF-SPYGHANWSPSSPLH 1570
Query: 618 -PPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSST 676
RD +P +G++P Y P SP ++PG +S
Sbjct: 1571 ISDRDTDYPSSPCQFGSTPGYGPTSP------------SLGTSPG--FSPI--------- 1607
Query: 677 YVNAPSPYLPSTP---GGQPMTPNSASYLPGTPGGQPMT-----PGTGGLDAMSP 723
+PS YLPS+P PM SA Y P + PM+ P + G +SP
Sbjct: 1608 ---SPS-YLPSSPDYAATSPMVTPSAGYSPKSLSHSPMSLVYYNPSSSGCSPISP 1658
>gi|290984021|ref|XP_002674726.1| RNA polymerase II largest subunit [Naegleria gruberi]
gi|284088318|gb|EFC41982.1| RNA polymerase II largest subunit [Naegleria gruberi]
Length = 1650
Score = 39.7 bits (91), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 19/120 (15%)
Query: 580 TPLHPYMTPMRDAGATPI-HDGMRTPMRDRAWNPYTPMSPPRDNWEDGNP-GSWGTSPQY 637
+P +P+ ++P H+ +P + ++P +P N+ +P GS Y
Sbjct: 1497 SPYTSAFSPITSIASSPTSHNASYSPSANHNYSPSSPA-----NYSPSSPLGS------Y 1545
Query: 638 QPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTPN 697
P SP R Y +P G S +P + T +N+P Y PS+P P++PN
Sbjct: 1546 SPSSPNYRDYSPTSP------LINGPMSPIYSPSSPAYTPMNSPGRYSPSSPAFSPLSPN 1599
>gi|242398372|ref|YP_002993796.1| NusG transcription antitermination protein [Thermococcus sibiricus
MM 739]
gi|242264765|gb|ACS89447.1| NusG transcription antitermination protein [Thermococcus sibiricus
MM 739]
Length = 155
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 7 KGSELQIRSVIALDHLKNYIYIEADKEAHVKEACKGLRNIYSQKVMLVPIREMTDVLAVE 66
K L I ++++ ++ YI++EA ++A V E +G+R+ + E+ L +
Sbjct: 31 KTYSLPIMAILSPSKVRGYIFVEATEKAAVDEVIRGIRHAKGTLPGPISFIEIEHFLEEK 90
Query: 67 SKAIDLSRDTWVRMKIGNYKGDLAKVVDVDNVRQRVTVKLI 107
V + G +KG+ AKVV VD + + V+LI
Sbjct: 91 PAVSGFEPGDIVELIAGPFKGEKAKVVRVDESKDEIVVELI 131
>gi|321458590|gb|EFX69656.1| hypothetical protein DAPPUDRAFT_328912 [Daphnia pulex]
Length = 1326
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 72/177 (40%), Gaps = 32/177 (18%)
Query: 557 VSTP----YRDTPRYGMGSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNP 612
V TP + +TP GSETP TP R ATP HD R R+R W+
Sbjct: 245 VETPAVARWDETPSRSKGSETPAAGGVTP------GSRLWDATPGHDDSRK--RNR-WDE 295
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
TP + + G W +P+ G + E PTP AS + + TP +
Sbjct: 296 -TPKTERAGEFTPGFGSGWAETPRTDRGGDTIQ--ETPTPS---ASKRRSRWDE--TPAN 347
Query: 673 SSSTYVNAPSPYLPSTPGGQP--MTPNSASYLPGTPGGQP----MTPGTGGLDAMSP 723
SS+T +P PS G MTP A TP GQ TP G L M+P
Sbjct: 348 SSATPSGGMTPQTPSLSGAMTPRMTPGGA-----TPIGQKAMAMATPTPGHLVTMTP 399
>gi|303317798|ref|XP_003068901.1| DNA-directed RNA polymerase II largest subunit, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240108582|gb|EER26756.1| DNA-directed RNA polymerase II largest subunit, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 1746
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 40/166 (24%)
Query: 549 SMISDNVVVSTPYRDT---PRYGMGSETPMHPSRTPLHPYMTPMRDAGAT---PIHDGMR 602
S + +N+ +S+P D+ P GSETP AG T P G
Sbjct: 1513 SPMQENMYISSPDPDSQFSPIGQTGSETP-----------------AGFTEYQPPGFGGF 1555
Query: 603 TPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGG 662
+P R+ Y+P SP + TSP PG PS Y +PG S P
Sbjct: 1556 SPAGARSPGGYSPTSP------------FNTSPT-SPGYSPSSGYSPTSPGMSITS-PRY 1601
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPG-GQPMTPNSASYLPGTPG 707
S +P +S T+ Y P++PG GQ +P S SY P +PG
Sbjct: 1602 MTSPGFSP--ASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPG 1645
>gi|303286809|ref|XP_003062694.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456211|gb|EEH53513.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 496
Score = 39.7 bits (91), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 11/110 (10%)
Query: 733 WFMPDILVRRSGEESVVG-------VIREVLPDGSCRVVLGSSGNGDTITALPNE-IEIV 784
W P I VR + G V+ +V+ C + L NG+ ++ +P +E
Sbjct: 381 WLYPAIRVRIVSKSFQSGRLYLKKAVVVDVVSPRECTLELE---NGEVLSNVPQRALETA 437
Query: 785 PPRKTDKIKIMGGPHRGATGKLIGVDGTDGIVKVDVSLDVKILDMAILAK 834
P++ ++ ++ G HRG GKL+ G G V+++ V L + +A+
Sbjct: 438 LPKRGGRVAVLAGAHRGKRGKLLEKSGDAGSVQLNDDFSVHSLSLDAIAE 487
>gi|320038943|gb|EFW20878.1| DNA-directed RNA polymerase II largest subunit [Coccidioides
posadasii str. Silveira]
Length = 1750
Score = 39.7 bits (91), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 40/166 (24%)
Query: 549 SMISDNVVVSTPYRDT---PRYGMGSETPMHPSRTPLHPYMTPMRDAGAT---PIHDGMR 602
S + +N+ +S+P D+ P GSETP AG T P G
Sbjct: 1513 SPMQENMYISSPDPDSQFSPIGQTGSETP-----------------AGFTEYQPPGFGGF 1555
Query: 603 TPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGG 662
+P R+ Y+P SP + TSP PG PS Y +PG S P
Sbjct: 1556 SPAGARSPGGYSPTSP------------FNTSPT-SPGYSPSSGYSPTSPGMSITS-PRY 1601
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPG-GQPMTPNSASYLPGTPG 707
S +P +S T+ Y P++PG GQ +P S SY P +PG
Sbjct: 1602 MTSPGFSP--ASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPG 1645
>gi|119186393|ref|XP_001243803.1| hypothetical protein CIMG_03244 [Coccidioides immitis RS]
gi|392870516|gb|EAS32326.2| DNA-directed RNA polymerase II largest subunit [Coccidioides immitis
RS]
Length = 1750
Score = 39.7 bits (91), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 40/166 (24%)
Query: 549 SMISDNVVVSTPYRDT---PRYGMGSETPMHPSRTPLHPYMTPMRDAGAT---PIHDGMR 602
S + +N+ +S+P D+ P GSETP AG T P G
Sbjct: 1513 SPMQENMYISSPDPDSQFSPIGQTGSETP-----------------AGFTEYQPPGFGGF 1555
Query: 603 TPMRDRAWNPYTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGG 662
+P R+ Y+P SP + TSP PG PS Y +PG S P
Sbjct: 1556 SPAGARSPGGYSPTSP------------FNTSPT-SPGYSPSSGYSPTSPGMSITS-PRY 1601
Query: 663 NYSDAGTPRDSSSTYVNAPSPYLPSTPG-GQPMTPNSASYLPGTPG 707
S +P +S T+ Y P++PG GQ +P S SY P +PG
Sbjct: 1602 MTSPGFSP--ASPTFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPG 1645
>gi|413915248|gb|AFW21486.1| RNA polymerase II largest subunit [Neotyphodium aotearoae]
Length = 1737
Score = 39.3 bits (90), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 75/211 (35%), Gaps = 64/211 (30%)
Query: 564 TPRYGMGSETPMHPSRTPLHPYMT-----PMRDAGATPIHDGMRTPMRDRAWNP-YTPMS 617
+P G GSETP T PY+T P + +P + GM + N Y+P S
Sbjct: 1528 SPIQGAGSETP-----TGFGPYLTRGATSPFSTSPTSPFNAGMAVGYSPSSPNAGYSPTS 1582
Query: 618 PPRDN---------------------------WEDGNPGSWGTSPQYQPGSPPSRAYEAP 650
P D +P TSP Y P SP S + +P
Sbjct: 1583 PLLDGGAGRYATSPSFSPSSPSFSPTSPMLRPTSPASPNYSPTSPSYSPTSPTSPRHYSP 1642
Query: 651 TPGSGWASTPGGNYSDAGTPRDSSSTYVN----------------------APSPYLPS- 687
T + + S +YS A +S ++ A SP PS
Sbjct: 1643 TSPAQFNSPTSPSYSPASPNYSPASPNLHGAGPTSPSYSPASPSWSPTSPEAYSPTSPSF 1702
Query: 688 --TPGGQPMTPNSASYLPGTPGGQPMTPGTG 716
+PG Q +P S SY P +P P TPG G
Sbjct: 1703 QRSPGNQ-QSPTSPSYSPTSPAFSPRTPGPG 1732
>gi|316997013|dbj|BAJ52634.1| RNA polymerase II largest subunit [Ephydatia fluviatilis]
Length = 1146
Score = 39.3 bits (90), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 637 YQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLPSTPGGQPMTP 696
+ P + + + +P+ GW+ P Y+ SS Y A Y P++PGG P
Sbjct: 1046 FSPAASETSGF-SPSYSPGWSPNPASPYAPRSPGFPSSPGYSPASPQYSPASPGG----P 1100
Query: 697 NSASYLPGTPGGQPMTP 713
S +Y P +PG P +P
Sbjct: 1101 TSPTYSPSSPGYSPTSP 1117
>gi|425770649|gb|EKV09117.1| DNA-directed RNA polymerase [Penicillium digitatum Pd1]
gi|425771955|gb|EKV10383.1| DNA-directed RNA polymerase [Penicillium digitatum PHI26]
Length = 1733
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 10/105 (9%)
Query: 616 MSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSS 675
SP ++ +P TSP Y SP S +Y +PG S NYS +S
Sbjct: 1596 FSPSSPTFQSTSPVYSPTSPAYGRASPTSPSYSPTSPG---FSPTSPNYSPTSPSFSPAS 1652
Query: 676 TYVNAPSP-YLPSTPG------GQPMTPNSASYLPGTPGGQPMTP 713
+ SP Y P++P P +P S Y P +PG P +P
Sbjct: 1653 PAFSPTSPSYSPTSPAISGARHLSPTSPTSPKYTPTSPGWSPTSP 1697
>gi|452844541|gb|EME46475.1| hypothetical protein DOTSEDRAFT_70470 [Dothistroma septosporum NZE10]
Length = 1773
Score = 39.3 bits (90), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Query: 613 YTPMSPPRDNWEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGNYSDAGTPRD 672
Y+P SP +P TSPQY P SP Y +PT + ++P + AG+
Sbjct: 1665 YSPTSPAHAPGSATSPKYSPTSPQYSPTSP---QY-SPTSPAYSPTSPAYRSNGAGSSNS 1720
Query: 673 SSSTYVNAPSP-YLPSTPGGQPMTPNSA-SYLPGTPGGQPMTPG 714
+S + SP Y P++P +PNS Y P +P P +P
Sbjct: 1721 PTSPSYSPRSPVYSPTSPAQDADSPNSPDKYSPTSPQHSPTSPA 1764
>gi|392572014|gb|EIW65186.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Trametes versicolor FP-101664 SS1]
Length = 1748
Score = 39.3 bits (90), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 62/148 (41%), Gaps = 13/148 (8%)
Query: 570 GSETPMHPSRTPLHPYMTPMRDAGATPIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPG 629
G +PM S P+ R GAT +P + Y+P SP + +P
Sbjct: 1575 GGTSPMGTSPYATSPFYD--RSHGATSPTYSPTSPALNLTSPGYSPTSP---RYSPTSPS 1629
Query: 630 SWGTSPQYQPGSP---PSRAYEAPTPGSGWASTPGGNYSDAGTPRDSSSTYVNAPSPYLP 686
TSP+Y P SP P+ +PT S ++P YS TP S T SP P
Sbjct: 1630 FSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASP--RYSP--TPAQMSPTSPKY-SPTSP 1684
Query: 687 STPGGQPMTPNSASYLPGTPGGQPMTPG 714
++P +P S +Y P +P P +P
Sbjct: 1685 ASPASPRYSPTSPTYSPASPAYSPASPA 1712
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,819,068,322
Number of Sequences: 23463169
Number of extensions: 743899669
Number of successful extensions: 2422813
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 7063
Number of HSP's that attempted gapping in prelim test: 2339803
Number of HSP's gapped (non-prelim): 54298
length of query: 838
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 687
effective length of database: 8,816,256,848
effective search space: 6056768454576
effective search space used: 6056768454576
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)