BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003215
(838 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Query: 160 IYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYD 219
+YLG A RD+L GIT +LN V CP +F+ + Y+ + ++D+ DI+S +
Sbjct: 11 LYLGSAYHAARRDMLDALGITALLN-VSSDCPNHFEGHYQYKCIPVEDNHKADISSWFME 69
Query: 220 VFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNM 279
+Y + V++ GRV VH G+SRS ++ +AYLM ++ ++AF++VK R I PN
Sbjct: 70 AIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRSIISPNF 129
Query: 280 GFACQLLQCQKRVHA 294
F QLLQ + +V A
Sbjct: 130 SFMGQLLQFESQVLA 144
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 160 IYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYD 219
+ LG A D D LK++ +THILN V + F +DF Y+++ + D P +I S +
Sbjct: 11 LLLGSQDAAHDLDTLKKNKVTHILN-VAYGVENAFLSDFTYKSISILDLPETNILSYFPE 69
Query: 220 VFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNM 279
F++ E+ + K G V VH GVSR+ ++VI +LM E SF AF VK AR PN
Sbjct: 70 CFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNARPSICPNS 129
Query: 280 GFACQLLQCQK 290
GF QL Q+
Sbjct: 130 GFMEQLRTYQE 140
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
Query: 155 KVAEHIYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDIT 214
++ +++LG + + D L+ GIT +LN V CP +F+ F Y+++ ++D+ +I+
Sbjct: 6 EILPYLFLGSCSHSSDLQGLQACGITAVLN-VSASCPNHFEGLFRYKSIPVEDNQMVEIS 64
Query: 215 SILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGI 274
+ + + + V+ GGRV VH G+SRS ++ +AYLM D+AF +VK RG+
Sbjct: 65 AWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGV 124
Query: 275 ADPNMGFACQLLQCQKRV 292
PN F QLLQ + +V
Sbjct: 125 ISPNFSFMGQLLQFETQV 142
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 160 IYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYD 219
+YLG A + L IT +LN V E Y+ + ++DS + DI+S +
Sbjct: 13 LYLGSAYHASKCEFLANLHITALLN-VSRRTSEACMTHLHYKWIPVEDSHTADISSHFQE 71
Query: 220 VFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNM 279
D+ + VREKGG+V VH G+SRS ++ +AYLM + +AF Y+K R + PN
Sbjct: 72 AIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRSMVSPNF 131
Query: 280 GFACQLLQCQKRV 292
GF QLLQ + +
Sbjct: 132 GFMGQLLQYESEI 144
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 154 SKVAEHIYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDI 213
+++ ++LG +VA +R +L+ GIT I+N P + F Y + L D P I
Sbjct: 27 AQITSSLFLGRGSVASNRHLLQARGITCIVNAT-IEIPNFNWPQFEYVKVPLADMPHAPI 85
Query: 214 TSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARG 273
V D V K G VHC GVSRS +L IAYLM +A+ +VKA R
Sbjct: 86 GLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRP 145
Query: 274 IADPNMGFACQLLQCQKRV 292
+ PN+GF QL+ ++++
Sbjct: 146 VIRPNVGFWRQLIDYERQL 164
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 154 SKVAEHIYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDI 213
+K+ +Y+G ARD + L ++ +THIL+ P Y + DSPS+++
Sbjct: 8 NKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARP--MLEGVKYLCIPAADSPSQNL 65
Query: 214 TSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARG 273
T + + + R +G VHC GVSRS +LVIAY+M ++DA V+A R
Sbjct: 66 TRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAGRS 125
Query: 274 IADPNMGFACQLLQCQKR-VHAF 295
A+PN+GF QL + +K VH +
Sbjct: 126 CANPNVGFQRQLQEFEKHEVHQY 148
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 76/143 (53%), Gaps = 10/143 (6%)
Query: 151 KECSKVAEHIYLG--GDAVARDRDILKQHGITHILNCV------GFVCPEYFKADFVYRT 202
+E ++ ++LG A+ +L++HGITHI+ C+ F+ P F+ F Y
Sbjct: 4 REMQEILPGLFLGPYSSAMKSKLPVLQKHGITHII-CIRQNIEANFIKPN-FQQLFRYLV 61
Query: 203 LWLQDSPSEDITSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFD 262
L + D+P E+I ++ + + GG+V VH G+SRS + VIAY+M G +
Sbjct: 62 LDIADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYR 121
Query: 263 DAFQYVKAARGIADPNMGFACQL 285
DAF YV+ R +PN GF QL
Sbjct: 122 DAFAYVQERRFCINPNAGFVHQL 144
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 153 CSKVAEHIYLGGDAVARDRDILKQHGITHILNC--------VGFVCPEYFKADFVYRTLW 204
C++V IY+G +VA+D L++ GITH+LN V Y + Y +
Sbjct: 29 CNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIK 88
Query: 205 LQDSPSEDITSILYDVFDYFED-VREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDD 263
D+ ++++ D+ + + +K GRV VHC +G SRS +LVIAYLM R+
Sbjct: 89 ANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKS 148
Query: 264 AFQYVKAARGIADPNMGFACQLLQCQKRV 292
A V+ R I PN GF QL Q R+
Sbjct: 149 ALSIVRQNREIG-PNDGFLAQLCQLNDRL 176
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 75/149 (50%), Gaps = 10/149 (6%)
Query: 153 CSKVAEHIYLGGDAVARDRDILKQHGITHILNC--------VGFVCPEYFKADFVYRTLW 204
C++V IY+G +VA+D L++ GITH+LN V Y + Y +
Sbjct: 28 CNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIK 87
Query: 205 LQDSPSEDITSILYDVFDYFED-VREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDD 263
D+ ++++ D+ + + +K GRV VHC +G SRS +LVIAYLM R+
Sbjct: 88 ANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKS 147
Query: 264 AFQYVKAARGIADPNMGFACQLLQCQKRV 292
A V+ R I PN GF QL Q R+
Sbjct: 148 ALSIVRQNREIG-PNDGFLAQLCQLNDRL 175
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
Query: 154 SKVAEHIYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDI 213
+++ EH++LG + A + + L+ G+ +ILN + +F F Y + + D + D+
Sbjct: 5 TQIFEHVFLGSEWNASNLEDLQNRGVRYILNVTREI-DNFFPGVFEYHNIRVYDEEATDL 63
Query: 214 TSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARG 273
+ D + + ++ G + VH GVSRS S VIAY M G + D A+ YVK R
Sbjct: 64 LAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRT 123
Query: 274 IADPNMGFACQLLQCQ 289
+ PN F QL + Q
Sbjct: 124 VTKPNPSFMRQLEEYQ 139
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 2/132 (1%)
Query: 154 SKVAEHIYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDI 213
+KV +YLG A+D D L ++ ITHI++ P+ D Y + + D+P I
Sbjct: 9 TKVLPGLYLGNFIDAKDLDQLGRNKITHIISI--HESPQPLLQDITYLRIPVADTPEVPI 66
Query: 214 TSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARG 273
+ ++ R GG VH G+SRST++V AY+M G + D + +KA R
Sbjct: 67 KKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKATRP 126
Query: 274 IADPNMGFACQL 285
IA+PN GF QL
Sbjct: 127 IANPNPGFRQQL 138
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 10/149 (6%)
Query: 153 CSKVAEHIYLGGDAVARDRDILKQHGITHILNC--------VGFVCPEYFKADFVYRTLW 204
C++V IY+G +VA+D L++ GITH+LN V Y + Y +
Sbjct: 29 CNEVTPRIYVGNASVAQDIPKLQKLGITHVLNAAEGRSFMHVNTNANFYKDSGITYLGIK 88
Query: 205 LQDSPSEDITSILYDVFDYFED-VREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDD 263
D+ ++++ D+ + + +K GRV VH +G SRS +LVIAYLM R+
Sbjct: 89 ANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIAYLMMRQKMDVKS 148
Query: 264 AFQYVKAARGIADPNMGFACQLLQCQKRV 292
A V+ R I PN GF QL Q R+
Sbjct: 149 ALSIVRQNREIG-PNDGFLAQLCQLNDRL 176
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 76.6 bits (187), Expect = 5e-14, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 74/138 (53%), Gaps = 6/138 (4%)
Query: 160 IYLGGDAVARDRDILKQHGITHILNCVGFV---CPEYFKA-DFVYRTLWLQDSPSEDITS 215
+YLG +A +R L++ GITH+LN PE ++ Y + DSP+ D++
Sbjct: 9 LYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSI 68
Query: 216 ILYDVFDYFED-VREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGI 274
D+ + + GG++ VHC GVSRS +LV+AYLM + +A + VK RGI
Sbjct: 69 HFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRGI 128
Query: 275 ADPNMGFACQLLQCQKRV 292
PN GF QLL +R+
Sbjct: 129 I-PNRGFLRQLLALDRRL 145
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 154 SKVAEHIYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDI 213
S++ + +Y+ A ++ +L + IT ++N V ++ D Y + + DSP+ +
Sbjct: 21 SQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVVNTLYE-DIQYMQVPVADSPNSRL 79
Query: 214 TSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARG 273
+ D+ V K GR +HC GVSRS +L +AYLM S DA + K+ R
Sbjct: 80 CDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSLLDAHTWTKSCRP 139
Query: 274 IADPNMGFACQLLQ 287
I PN GF QL+
Sbjct: 140 IIRPNSGFWEQLIH 153
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 155 KVAEHIYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFK--ADFVYRTLWLQDSPSED 212
++ +YLG + + D+L++ GI +ILN + P F+ +F Y+ + + D S++
Sbjct: 6 EILPFLYLGCAKDSTNLDVLEEFGIKYILNVTPNL-PNLFENAGEFKYKQIPISDHWSQN 64
Query: 213 ITSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
++ + + ++ R K V VH G+SRS ++ +AYLM + S +DA+ VK +
Sbjct: 65 LSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKK 124
Query: 273 GIADPNMGFACQLLQCQKRV 292
PN F QLL ++ +
Sbjct: 125 SNISPNFNFMGQLLDFERTL 144
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 155 KVAEHIYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFK--ADFVYRTLWLQDSPSED 212
++ ++YLG + + + L + GI +ILN + P +F+ DF Y+ + + D S++
Sbjct: 5 QILPNLYLGSARDSANLESLAKLGIRYILNVTPNL-PNFFEKNGDFHYKQIPISDHWSQN 63
Query: 213 ITSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
++ + ++ ++ + V VHC GVSRS ++ +AYLM + S +DA+ VK +
Sbjct: 64 LSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKK 123
Query: 273 GIADPNMGFACQLLQCQKRV 292
PN F QLL ++ +
Sbjct: 124 SNISPNFNFMGQLLDFERSL 143
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 160 IYLGGDAVARDRDILKQHGITHILNCVGF-----VCPEYFK-ADFVYRTLWLQDSPSEDI 213
+Y+G +A A DR L++ G TH+LN P+Y++ D Y + D P+ D+
Sbjct: 61 LYIGDEATALDRYRLQKAGFTHVLNAAHGRWNVDTGPDYYRDMDIQYHGVEADDLPTFDL 120
Query: 214 TSILYDVFDYFE-DVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
+ Y + + + + ++ VHC G SRS +LV+AYLM + + DA Q V R
Sbjct: 121 SVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAIQQVAKNR 180
Query: 273 GIADPNMGFACQLLQCQKRV 292
+ PN GF QL + K++
Sbjct: 181 CVL-PNRGFLKQLRELDKQL 199
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 6/138 (4%)
Query: 160 IYLGGDAVARDRDILKQHGITHILNCVGFV---CPEYFKA-DFVYRTLWLQDSPSEDITS 215
+YLG +A +R L++ GITH+LN PE ++ Y + DSP+ D++
Sbjct: 10 LYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPAFDMSI 69
Query: 216 ILYDVFDYFED-VREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGI 274
D+ + + GG++ VH GVSRS +LV+AYLM + +A + VK RGI
Sbjct: 70 HFQTAADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLTLVEAIKKVKDHRGI 129
Query: 275 ADPNMGFACQLLQCQKRV 292
PN GF QLL +R+
Sbjct: 130 I-PNRGFLRQLLALDRRL 146
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 160 IYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWLQ-------DSPSED 212
++LG ARD+ L Q GITH++N A F YR + L+ D+P D
Sbjct: 53 LFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDTGAKF-YRGMSLEYYGIEADDNPFFD 111
Query: 213 ITSILYDVFDYFED-VREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAA 271
++ V Y + GRV VHC GVSRS +LV+A+LM E + +A Q V+A
Sbjct: 112 LSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAH 171
Query: 272 RGIADPNMGFACQLLQCQKRV 292
R I PN GF QL R+
Sbjct: 172 RNIC-PNSGFLRQLQVLDNRL 191
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 72.4 bits (176), Expect = 9e-13, Method: Composition-based stats.
Identities = 52/163 (31%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 154 SKVAEHIYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWLQDSPSEDI 213
++VA +++G A ++L + GIT +N V P + + D P+ED+
Sbjct: 13 ARVAPALFIGNARAAGATELLVRAGITLCVN-VSRQQPGPRAPGVAELRVPVFDDPAEDL 71
Query: 214 TSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARG 273
+ L E GG V+C G SRS ++ AYLM G S D AFQ VK+AR
Sbjct: 72 LTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDRAFQMVKSARP 131
Query: 274 IADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDP 316
+A+PN+GF QL + ++ + A I P P DP
Sbjct: 132 VAEPNLGFWAQLQKYEQTLQA-----------QAILPREPIDP 163
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Query: 150 DKECSKVAEHIYLGGDAVARDRDILKQHGITHILNCVGFV-CPEYFKADFVYRTLWLQDS 208
+ E + + ++LG + A+D D +++ I +++N + Y K F Y+ L DS
Sbjct: 5 NAELTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDS 64
Query: 209 PSEDITSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYV 268
+++ + F++ E+ + G + +HC GVSRS ++VIAYLM + DA+++V
Sbjct: 65 NKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFV 124
Query: 269 KAARGIADPNMGFACQLLQCQK 290
K R I PN+ F QLL+ ++
Sbjct: 125 KGKRPIISPNLNFMGQLLEFEE 146
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 77/140 (55%), Gaps = 1/140 (0%)
Query: 152 ECSKVAEHIYLGGDAVARDRDILKQHGITHILNCVGFV-CPEYFKADFVYRTLWLQDSPS 210
E + + ++LG + A+D D +++ I +++N + Y K F Y+ L DS
Sbjct: 3 ELTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNK 62
Query: 211 EDITSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKA 270
+++ + F++ E+ + G + +HC GVSRS ++VIAYLM + DA+++VK
Sbjct: 63 QNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKG 122
Query: 271 ARGIADPNMGFACQLLQCQK 290
R I PN+ F QLL+ ++
Sbjct: 123 KRPIISPNLNFMGQLLEFEE 142
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 160 IYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWLQ-------DSPSED 212
++LG ARD+ L Q GITH++N A F YR + L+ D+P D
Sbjct: 53 LFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDTGAKF-YRGMSLEYYGIEADDNPFFD 111
Query: 213 ITSILYDVFDYFED-VREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAA 271
++ V Y + GRV VHC GVSRS +LV+A+LM E + +A Q V+A
Sbjct: 112 LSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTVQAH 171
Query: 272 RGIADPNMGFACQL 285
R I PN GF QL
Sbjct: 172 RNIC-PNSGFLRQL 184
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 74/140 (52%), Gaps = 3/140 (2%)
Query: 155 KVAEHIYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFK--ADFVYRTLWLQDSPSED 212
++ ++YLG + + + L + GI +ILN + P +F+ DF Y+ + + D S++
Sbjct: 8 QILPNLYLGSARDSANLESLAKLGIRYILNVTPNL-PNFFEKNGDFHYKQIPISDHWSQN 66
Query: 213 ITSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
++ + ++ ++ + V VH GVSRS ++ +AYLM + S +DA+ VK +
Sbjct: 67 LSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKK 126
Query: 273 GIADPNMGFACQLLQCQKRV 292
PN F QLL ++ +
Sbjct: 127 SNISPNFNFMGQLLDFERSL 146
>pdb|3FFN|A Chain A, Crystal Structure Of Calcium-Free Human Gelsolin
pdb|3FFN|B Chain B, Crystal Structure Of Calcium-Free Human Gelsolin
Length = 782
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 327 PTPSALDSRGAFIVHIPAAIYIWIGKHCESIMERDARGAVCQLVRYERAQGRIVIIKEGE 386
P AL+S AF++ P+A Y+W+G + A+ +L+R RAQ V + EG
Sbjct: 583 PKAGALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQ----ELLRVLRAQ--PVQVAEGS 636
Query: 387 EPGYFWDAFSN 397
EP FW+A
Sbjct: 637 EPDGFWEALGG 647
>pdb|2FGH|A Chain A, Atp Bound Gelsolin
pdb|2FGH|B Chain B, Atp Bound Gelsolin
Length = 731
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 327 PTPSALDSRGAFIVHIPAAIYIWIGKHCESIMERDARGAVCQLVRYERAQGRIVIIKEGE 386
P AL+S AF++ P+A Y+W+G + A+ +L+R RAQ V + EG
Sbjct: 532 PKAGALNSNDAFVLKTPSAAYLWVGAGASEAEKTGAQ----ELLRVLRAQ--PVQVAEGS 585
Query: 387 EPGYFWDAFSN 397
EP FW+A
Sbjct: 586 EPDSFWEALGG 596
>pdb|1D0N|A Chain A, The Crystal Structure Of Calcium-Free Equine Plasma
Gelsolin.
pdb|1D0N|B Chain B, The Crystal Structure Of Calcium-Free Equine Plasma
Gelsolin
Length = 729
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 327 PTPSALDSRGAFIVHIPAAIYIWIGKHCESIMERDARGAVCQLVRYERAQGRIVIIKEGE 386
P AL+S AF++ P+A Y+W+G + A+ +L+R RAQ V + EG
Sbjct: 530 PKAGALNSNDAFVLKTPSAAYLWVGAGASEAEKTGAQ----ELLRVLRAQ--PVQVAEGS 583
Query: 387 EPGYFWDAFSN 397
EP FW+A
Sbjct: 584 EPDSFWEALGG 594
>pdb|1P8X|A Chain A, The Calcium-activated C-terminal Half Of Gelsolin
pdb|1P8X|B Chain B, The Calcium-activated C-terminal Half Of Gelsolin
pdb|1P8X|C Chain C, The Calcium-activated C-terminal Half Of Gelsolin
pdb|2FH1|A Chain A, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph
4.5
pdb|2FH1|B Chain B, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph
4.5
pdb|2FH1|C Chain C, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph
4.5
pdb|2FH2|A Chain A, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 4.5
pdb|2FH2|B Chain B, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 4.5
pdb|2FH2|C Chain C, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 4.5
pdb|2FH3|A Chain A, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph 8
pdb|2FH3|B Chain B, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph 8
pdb|2FH3|C Chain C, C-Terminal Half Of Gelsolin Soaked In Low Calcium At Ph 8
pdb|2FH4|A Chain A, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
pdb|2FH4|B Chain B, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
pdb|2FH4|C Chain C, C-Terminal Half Of Gelsolin Soaked In Egta At Ph 8
Length = 344
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 327 PTPSALDSRGAFIVHIPAAIYIWIGKHCESIMERDARGAVCQLVRYERAQGRIVIIKEGE 386
P AL+S AF++ P+A Y+W+G + A+ +L+R RAQ V + EG
Sbjct: 145 PKAGALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQ----ELLRVLRAQ--PVQVAEGS 198
Query: 387 EPGYFWDAFSN 397
EP FW+A
Sbjct: 199 EPDGFWEALGG 209
>pdb|1H1V|G Chain G, Gelsolin G4-G6ACTIN COMPLEX
Length = 331
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 327 PTPSALDSRGAFIVHIPAAIYIWIGKHCESIMERDARGAVCQLVRYERAQGRIVIIKEGE 386
P AL+S AF++ P+A Y+W+G + A+ +L+R RAQ V + EG
Sbjct: 145 PKAGALNSNDAFVLKTPSAAYLWVGTGASEAEKTGAQ----ELLRVLRAQ--PVQVAEGS 198
Query: 387 EPGYFWDAFSN 397
EP FW+A
Sbjct: 199 EPDGFWEALGG 209
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%)
Query: 230 KGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQ 289
K ++ +HC G+SRS +L+IAY+M S ++ +K+ +P++G QL++ +
Sbjct: 116 KREKILIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175
Query: 290 KRVHA 294
++A
Sbjct: 176 VALNA 180
>pdb|1NPH|A Chain A, Gelsolin Domains 4-6 In Active, Actin Free Conformation
Identifies Sites Of Regulatory Calcium Ions
Length = 329
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 327 PTPSALDSRGAFIVHIPAAIYIWIGKHCESIMERDARGAVCQLVRYERAQGRIVIIKEGE 386
P AL+S AF++ P+A Y+W+G S E+ A + +++R + Q ++EG
Sbjct: 143 PKSGALNSNDAFVLKTPSAAYLWVGAGA-SEAEKTAAQELLKVLRSQHVQ-----VEEGS 196
Query: 387 EPGYFWDAFSN 397
EP FW+A
Sbjct: 197 EPDGFWEALGG 207
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 154 SKVAEHIYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADF-VYRTLWLQDSPSED 212
+++ ++I+LG A + D + + I+ IL VG P FK + R + + +
Sbjct: 11 TQIIQYIHLGSFLNAHNVDYIHNNNISSIL-LVGIEVPSLFKDQCDILRLDIVSEEGHQL 69
Query: 213 ITSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
SI + ++ K G V + GV+++ ++VIA+LM+ + SF +AF V+
Sbjct: 70 YDSIPNAIKFIIRSIQRKEG-VLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQGLY 128
Query: 273 GIADPNMGFACQLLQCQKRV 292
+ D GF QL +K++
Sbjct: 129 PLIDIESGFILQLKLFEKKL 148
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 230 KGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQ 289
K ++ +H G+SRS +L+IAY+M S ++ +K+ +P++G QL++ +
Sbjct: 116 KREKILIHSQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175
Query: 290 KRVHA 294
++A
Sbjct: 176 VALNA 180
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%)
Query: 230 KGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQ 289
K ++ +H G+SRS +L+IAY+M S ++ +K+ +P++G QL++ +
Sbjct: 116 KREKILIHXQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWE 175
Query: 290 KRVHA 294
++A
Sbjct: 176 VALNA 180
>pdb|3FG7|A Chain A, The Crystal Structure Of Villin Domain 6
pdb|3FG7|B Chain B, The Crystal Structure Of Villin Domain 6
Length = 398
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 332 LDSRGAFIVHIPAAIYIWIGKHCESIMERDARGAVCQLVRYERAQGRIVIIKEGEEPGYF 391
L+S F++ + Y+W GK C S ER+ V + R + ++V+ EG+EP F
Sbjct: 204 LNSNDVFVLKTQSCCYLWCGKGC-SGDEREMAKMVADTI--SRTEKQVVV--EGQEPANF 258
Query: 392 WDAFSNFLPLMDKSRNGVEIRESTIKMVP 420
W A P + R ++E + + P
Sbjct: 259 WMALGGKAPYANTKR----LQEENLVITP 283
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
Query: 332 LDSRGAFIVHIPAAIYIWIGKHCESIMERDARGAVCQLVRYERAQGR-----IVIIKEGE 386
L+ F++ + ++ WIGKH E+ A Q GR I+++K+G
Sbjct: 308 LEEDDVFLLDVWDQVFFWIGKHANE-EEKKAAATTAQEYLKTHPSGRDPETPIIVVKQGH 366
Query: 387 EP----GYF--WDAF 395
EP G+F WD F
Sbjct: 367 EPPTFTGWFLAWDPF 381
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 205 LQDSPSEDITSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQS---- 260
L D + DI+ DV + ++ V VH GV+RS ++++AYLM + +S
Sbjct: 82 LVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPML 141
Query: 261 -FDDAFQYVKAARGIADPNMGFACQLLQ 287
F + ++ RG N F Q+++
Sbjct: 142 YFLYVYHSMRDLRGAFVENPSFKRQIIE 169
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 205 LQDSPSEDITSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDA 264
L D + DI+ DV + ++ V VHC GV+RS + ++AYL + +S
Sbjct: 99 LVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAXILAYLXSKNKESLPXL 158
Query: 265 -FQYV----KAARGIADPNMGFACQLLQ 287
F YV + RG N F Q+++
Sbjct: 159 YFLYVYHSXRDLRGAFVENPSFKRQIIE 186
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 205 LQDSPSEDITSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQS---- 260
L D + DI+ DV + ++ V VHC GV+RS + ++AYL + +S
Sbjct: 78 LVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAXILAYLXSKNKESSPXL 137
Query: 261 -FDDAFQYVKAARGIADPNMGFACQLLQ 287
F + + RG N F Q+++
Sbjct: 138 YFLYVYHSXRDLRGAFVENPSFKRQIIE 165
>pdb|1YN9|A Chain A, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|B Chain B, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
pdb|1YN9|C Chain C, Crystal Structure Of Baculovirus Rna 5'-Phosphatase
Complexed With Phosphate
Length = 169
Score = 37.4 bits (85), Expect = 0.031, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 193 YFKADFVYRTLWL--QDSPSEDITSILYDVFDYFEDVREK--GGRVFVHCCQGVSRSTSL 248
+ +A +Y+ + + Q P E SI+ + D ++ EK G V VHC G++R+ +
Sbjct: 74 FLRAGLLYKKIQVPGQTLPPE---SIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGYM 130
Query: 249 VIAYLMWREGQSFDDAFQYVKAARG 273
V YLM G + +A + ARG
Sbjct: 131 VCRYLMHTLGIAPQEAIDRFEKARG 155
>pdb|3FG6|A Chain A, Structure Of The C-terminus Of Adseverin
pdb|3FG6|C Chain C, Structure Of The C-terminus Of Adseverin
pdb|3FG6|G Chain G, Structure Of The C-terminus Of Adseverin
pdb|3FG6|E Chain E, Structure Of The C-terminus Of Adseverin
pdb|3FG6|F Chain F, Structure Of The C-terminus Of Adseverin
pdb|3FG6|H Chain H, Structure Of The C-terminus Of Adseverin
pdb|3FG6|D Chain D, Structure Of The C-terminus Of Adseverin
pdb|3FG6|B Chain B, Structure Of The C-terminus Of Adseverin
Length = 371
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 326 DPTPSALDSRGAFIVHIPA-AIYIWIGKHCESIMERDARGAVCQLVRYERAQGRIVIIKE 384
D ++L+S F++ +P + YIW+GK E+ A L + + + I+E
Sbjct: 185 DVDANSLNSNDVFVLKLPQNSGYIWVGKGASQEEEKGAEYVASVL------KCKTLRIQE 238
Query: 385 GEEPGYFWDAFS 396
GEEP FW++
Sbjct: 239 GEEPEEFWNSLG 250
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 12/60 (20%)
Query: 346 IYIWIGKHCESIMERDARGAVCQLVRYERAQGR-----IVIIKEGEEP----GYF--WDA 394
I+IWIGK + ++++ + + + + GR IVIIK+G EP G+F WD+
Sbjct: 310 IFIWIGKDANEVEKKESLKSAKMYLETDPS-GRDKRTPIVIIKQGHEPPTFTGWFLGWDS 368
>pdb|3NME|A Chain A, Structure Of A Plant Phosphatase
pdb|3NME|B Chain B, Structure Of A Plant Phosphatase
Length = 294
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 224 FEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
++ V+ GG +VH G R+ ++ + Y W +G +A + + + R
Sbjct: 99 YKAVKRNGGVTYVHSTAGXGRAPAVALTYXFWVQGYKLXEAHKLLXSKR 147
>pdb|3RZ2|A Chain A, Crystal Of Prl-1 Complexed With Peptide
pdb|3RZ2|B Chain B, Crystal Of Prl-1 Complexed With Peptide
Length = 189
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 174 LKQHGITHILNCVGFVCPEYFKADFVYRT-LWLQDSPSEDITSILYDVFDYFEDV----- 227
LK++G+T I+ VC + V + + + D P +D + D + +
Sbjct: 57 LKKYGVTTIVR----VCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKF 112
Query: 228 -REKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
E G + VHC G+ R+ LV A + G ++DA Q+++ R
Sbjct: 113 REEPGCCIAVHCVAGLGRAPVLV-ALALIEGGMKYEDAVQFIRQKR 157
>pdb|3F41|A Chain A, Structure Of The Tandemly Repeated Protein Tyrosine
Phosphatase Like Phytase From Mitsuokella Multacida
pdb|3F41|B Chain B, Structure Of The Tandemly Repeated Protein Tyrosine
Phosphatase Like Phytase From Mitsuokella Multacida
Length = 629
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 24/133 (18%)
Query: 146 IAFFDKECSKVAEHIYLGGDAVARDRDILKQHGITHILNCVGFVCPEYFKADFVYRTLWL 205
I FD + + + +Y+ + V + +++KQHG YF+ L L
Sbjct: 168 IYRFDDKKNVILSPVYVNYNKVRTEEEMVKQHG------------ANYFR-------LTL 208
Query: 206 QDSPSEDITSILYDVFDYFEDVREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQ--SFDD 263
QD D + D F F K + HC G+ R+T ++ + + + + SFDD
Sbjct: 209 QDHFRPDDPDV--DKFLEFYKSLPKDAWLHYHCYAGMGRTTIFMVMHDILKNAKDVSFDD 266
Query: 264 AFQYVKAARGIAD 276
Q K GI D
Sbjct: 267 IIQRQKLI-GIVD 278
>pdb|1X24|A Chain A, Prl-1 (Ptp4a)
pdb|1X24|B Chain B, Prl-1 (Ptp4a)
Length = 180
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 174 LKQHGITHILNCVGFVCPEYFKADFVYRT-LWLQDSPSEDITSILYDVFDYFEDV----- 227
LK++G+T I+ VC + V + + + D P +D + D + +
Sbjct: 57 LKKYGVTTIVR----VCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKF 112
Query: 228 -REKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
E G + VHC G+ R+ LV A + G ++DA Q+++ R
Sbjct: 113 REEPGCCIAVHCVAGLGRAPVLV-ALALIEGGMKYEDAVQFIRQKR 157
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 32.3 bits (72), Expect = 1.0, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 231 GGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
G V+VHC G SRS ++V AYL+ S ++A + + R
Sbjct: 89 GQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIR 130
>pdb|3EH1|A Chain A, Crystal Structure Of The Human Copii-Coat Protein Sec24b
Length = 751
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 283 CQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLNDP-----TPSALDSRGA 337
CQ+ + Q VH + +L R+ R+ +H+ +++ P + L GA
Sbjct: 586 CQI-KSQPLVHLMKMIHPNLYRIDRLTDEGA---VHVNDRIVPQPPLQKLSAEKLTREGA 641
Query: 338 FIVHIPAAIYIWIGKHCESIMERDARG 364
F++ + YIW+GK C++ D G
Sbjct: 642 FLMDCGSVFYIWVGKGCDNNFIEDVLG 668
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 220 VFDYFEDVREK-----GGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
V D+ V+ K G V VHC G+ R+ LV A + G ++DA Q+++ R
Sbjct: 81 VEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLV-ALALIESGMKYEDAIQFIRQKR 137
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 220 VFDYFEDVREK-----GGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
V D+ V+ K G V VHC G+ R+ LV A + G ++DA Q+++ R
Sbjct: 84 VEDWLSLVKAKFCEAPGSCVAVHCVAGLGRAPVLV-ALALIESGMKYEDAIQFIRQKR 140
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 10/103 (9%)
Query: 174 LKQHGITHI--LNCVGFVCPEYFKADFVYRTLWLQD--SPSEDITSILYDVFDYFEDVRE 229
K H +T I LN + + A F + L+ D +P++ I D+ + E
Sbjct: 214 FKNHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTPTDAIVKEFLDICENAE---- 269
Query: 230 KGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
G + VHC G+ R+ +L+ Y+M + + +V+ R
Sbjct: 270 --GAIAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICR 310
>pdb|1ZCK|A Chain A, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|B Chain B, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|C Chain C, Native Structure Prl-1 (Ptp4a1)
Length = 154
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 174 LKQHGITHILNCVGFVCPEYFKADFVYRT-LWLQDSPSEDITSILYDVFDYFEDV----- 227
LK++G+T I+ VC + V + + + D P +D + D + +
Sbjct: 31 LKKYGVTTIVR----VCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKF 86
Query: 228 -REKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
E G + VHC G+ R+ LV A + G ++DA Q+++ R
Sbjct: 87 REEPGCCIAVHCVAGLGRAPVLV-ALALIEGGXKYEDAVQFIRQKR 131
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 31.6 bits (70), Expect = 2.0, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 227 VREKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
+ EK G + VHC G+ R+ +++ +YL+ EG + A V+ R
Sbjct: 86 LSEKEGNL-VHCVGGIGRTGTILASYLILTEGLEVESAIDEVRLVR 130
>pdb|1RXD|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|C Chain C, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
Length = 159
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 174 LKQHGITHILNCVGFVCPEYFKADFVYRT-LWLQDSPSEDITSILYDVFDYFEDV----- 227
LK++G+T I+ VC + V + + + D P +D + D + +
Sbjct: 36 LKKYGVTTIVR----VCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKF 91
Query: 228 -REKGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAAR 272
E G + VHC G+ R+ LV A + G ++DA Q+++ R
Sbjct: 92 REEPGCCIAVHCVAGLGRAPVLV-ALALIEGGXKYEDAVQFIRQKR 136
>pdb|3TQE|A Chain A, Structure Of The Malonyl Coa-Acyl Carrier Protein
Transacylase (Fabd) From Coxiella Burnetii
Length = 316
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 675 ISPSSVDTAELCHKVSSSANNCVDSGRNYSWREGLK-ANRLDESVPDHCNQMQP 727
+ P+++++ + V S + VD N + EG K A R+ SVP HC QP
Sbjct: 160 VQPANLNSTD--QTVISGHSEAVDRALNXAKTEGAKIAKRIPVSVPSHCPLXQP 211
>pdb|3FPZ|A Chain A, Saccharomyces Cerevisiae Thi4p Is A Suicide Thiamin
Thiazole Synthase
pdb|3FPZ|B Chain B, Saccharomyces Cerevisiae Thi4p Is A Suicide Thiamin
Thiazole Synthase
Length = 326
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Query: 776 SFCHGKSRIQLDNNKELGNIEGSDQNQFGYDILTRMG 812
+FC K + +D N++LG ++G D N +D++ G
Sbjct: 243 AFC-AKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSG 278
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,077,831
Number of Sequences: 62578
Number of extensions: 939345
Number of successful extensions: 2017
Number of sequences better than 100.0: 58
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1932
Number of HSP's gapped (non-prelim): 70
length of query: 838
length of database: 14,973,337
effective HSP length: 107
effective length of query: 731
effective length of database: 8,277,491
effective search space: 6050845921
effective search space used: 6050845921
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)