Query 003217
Match_columns 838
No_of_seqs 448 out of 2554
Neff 7.6
Searched_HMMs 13730
Date Mon Mar 25 17:31:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003217.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/003217hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i9za_ d.151.1.2 (A:) Synapto 100.0 3.9E-54 2.9E-58 473.8 24.9 266 528-836 1-272 (345)
2 d1vyhc1 b.69.4.1 (C:92-408) Pl 100.0 1.8E-30 1.3E-34 271.6 36.3 284 191-524 17-317 (317)
3 d1nr0a1 b.69.4.1 (A:2-312) Act 100.0 6.8E-30 5E-34 275.1 38.6 263 141-525 28-310 (311)
4 d1erja_ b.69.4.1 (A:) Tup1, C- 100.0 6.7E-30 4.9E-34 279.2 38.7 292 134-526 64-386 (388)
5 d1gxra_ b.69.4.1 (A:) Groucho/ 100.0 3.1E-29 2.2E-33 271.4 39.9 273 134-525 53-335 (337)
6 d1nr0a2 b.69.4.1 (A:313-611) A 100.0 1.6E-28 1.2E-32 259.2 33.5 266 191-525 12-297 (299)
7 d1tbga_ b.69.4.1 (A:) beta1-su 100.0 6.7E-28 4.9E-32 256.3 36.6 270 191-524 55-340 (340)
8 d1nexb2 b.69.4.1 (B:370-744) C 100.0 6.5E-28 4.7E-32 256.7 31.5 293 191-532 12-317 (355)
9 d1p22a2 b.69.4.1 (A:253-545) F 100.0 6.3E-27 4.6E-31 241.9 33.2 258 191-524 15-293 (293)
10 d2ovrb2 b.69.4.1 (B:2365-2706) 100.0 1.3E-26 9.2E-31 245.2 36.3 73 191-273 16-88 (342)
11 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 100.0 3.9E-27 2.8E-31 258.6 32.2 272 191-527 7-360 (371)
12 d1vyhc1 b.69.4.1 (C:92-408) Pl 100.0 9.5E-26 6.9E-30 235.3 38.3 298 113-485 5-317 (317)
13 d1gxra_ b.69.4.1 (A:) Groucho/ 100.0 1.9E-26 1.4E-30 249.2 33.1 242 190-530 50-299 (337)
14 d1nexb2 b.69.4.1 (B:370-744) C 100.0 8.6E-26 6.2E-30 240.1 37.6 330 116-525 3-352 (355)
15 d1pgua2 b.69.4.1 (A:327-613) A 100.0 7.8E-27 5.7E-31 244.9 26.7 248 191-525 13-286 (287)
16 d1nr0a1 b.69.4.1 (A:2-312) Act 99.9 1.2E-26 8.9E-31 249.4 28.7 236 191-529 17-271 (311)
17 d1erja_ b.69.4.1 (A:) Tup1, C- 99.9 8.9E-26 6.5E-30 246.2 34.0 244 191-531 62-343 (388)
18 d1pgua1 b.69.4.1 (A:2-326) Act 99.9 1.8E-25 1.3E-29 241.0 32.6 242 191-525 63-325 (325)
19 d2imqx1 d.151.1.2 (X:3-282) Sa 99.9 4.9E-27 3.6E-31 247.9 17.0 230 550-836 3-233 (280)
20 d1tbga_ b.69.4.1 (A:) beta1-su 99.9 7.5E-23 5.5E-27 216.8 37.2 269 133-485 56-340 (340)
21 d2ovrb2 b.69.4.1 (B:2365-2706) 99.9 4.1E-23 3E-27 217.9 31.4 267 232-533 7-295 (342)
22 d1sq9a_ b.69.4.1 (A:) Antivira 99.9 3.9E-23 2.9E-27 228.2 32.0 277 134-502 16-335 (393)
23 d1yfqa_ b.69.4.2 (A:) Cell cyc 99.9 1.7E-23 1.3E-27 220.0 26.7 277 191-525 11-321 (342)
24 d1nr0a2 b.69.4.1 (A:313-611) A 99.9 3.8E-23 2.8E-27 217.5 27.8 243 232-530 3-258 (299)
25 d1k8kc_ b.69.4.1 (C:) Arp2/3 c 99.9 1.2E-22 9E-27 222.3 28.7 291 135-487 10-359 (371)
26 d1sq9a_ b.69.4.1 (A:) Antivira 99.9 1.3E-22 9.5E-27 223.9 26.8 269 191-531 14-324 (393)
27 d1pgua1 b.69.4.1 (A:2-326) Act 99.9 1.4E-22 1E-26 218.0 25.8 246 191-530 17-285 (325)
28 d1p22a2 b.69.4.1 (A:253-545) F 99.9 5E-20 3.6E-24 189.4 31.2 229 232-527 6-247 (293)
29 d1yfqa_ b.69.4.2 (A:) Cell cyc 99.9 8.7E-21 6.3E-25 199.0 25.6 290 134-505 13-337 (342)
30 d1k32a3 b.69.9.1 (A:320-679) T 99.9 1.4E-20 9.9E-25 201.5 22.9 315 134-531 6-349 (360)
31 d1qksa2 b.70.2.1 (A:136-567) C 99.8 5.4E-19 3.9E-23 198.4 22.9 332 148-529 39-405 (432)
32 d1pgua2 b.69.4.1 (A:327-613) A 99.8 2.9E-18 2.1E-22 178.8 26.1 248 134-486 15-286 (287)
33 d1hzua2 b.70.2.1 (A:118-543) C 99.8 5.5E-18 4E-22 188.9 29.1 321 148-530 39-400 (426)
34 d1l0qa2 b.69.2.3 (A:1-301) Sur 99.8 3.6E-16 2.6E-20 162.4 33.6 251 148-528 9-276 (301)
35 d1hzua2 b.70.2.1 (A:118-543) C 99.8 2.4E-17 1.8E-21 183.5 24.1 279 201-534 30-348 (426)
36 d1k32a3 b.69.9.1 (A:320-679) T 99.7 7.1E-17 5.1E-21 172.1 22.5 320 87-500 10-358 (360)
37 d1pbyb_ b.69.2.2 (B:) Quinohem 99.7 2.2E-15 1.6E-19 158.4 30.1 279 148-496 8-319 (337)
38 d1jmxb_ b.69.2.2 (B:) Quinohem 99.6 5.8E-15 4.2E-19 155.8 23.9 155 142-352 8-183 (346)
39 d1qksa2 b.70.2.1 (A:136-567) C 99.6 4.5E-15 3.3E-19 166.0 22.9 306 135-496 64-412 (432)
40 d1pbyb_ b.69.2.2 (B:) Quinohem 99.6 7.4E-15 5.4E-19 154.3 20.3 283 204-530 2-313 (337)
41 d1jmxb_ b.69.2.2 (B:) Quinohem 99.6 2.7E-15 2E-19 158.4 14.8 289 197-532 2-327 (346)
42 d2bbkh_ b.69.2.1 (H:) Methylam 99.5 7.4E-13 5.4E-17 140.9 25.6 278 197-531 7-336 (355)
43 d1l0qa2 b.69.2.3 (A:1-301) Sur 99.5 2.5E-12 1.8E-16 132.7 29.0 230 137-495 36-283 (301)
44 d2madh_ b.69.2.1 (H:) Methylam 99.5 5.5E-12 4E-16 135.3 31.6 275 191-532 20-355 (373)
45 d2madh_ b.69.2.1 (H:) Methylam 99.5 2.1E-11 1.5E-15 130.7 32.8 294 140-506 30-369 (373)
46 d1ri6a_ b.69.11.1 (A:) Putativ 99.4 3.3E-11 2.4E-15 126.3 26.6 144 148-344 11-162 (333)
47 d2bbkh_ b.69.2.1 (H:) Methylam 99.3 6.7E-11 4.9E-15 125.4 25.1 104 140-273 11-140 (355)
48 d1ri6a_ b.69.11.1 (A:) Putativ 99.3 2.4E-10 1.8E-14 119.4 25.4 271 205-526 6-306 (333)
49 d1mdah_ b.69.2.1 (H:) Methylam 99.1 7.7E-10 5.6E-14 119.0 18.0 282 191-530 19-349 (368)
50 d2bgra1 b.70.3.1 (A:39-508) Di 99.0 9.6E-09 7E-13 114.1 22.9 107 142-273 27-143 (470)
51 d1mdah_ b.69.2.1 (H:) Methylam 98.9 1.3E-08 9.6E-13 109.1 17.3 70 196-273 69-157 (368)
52 d1qnia2 b.69.3.1 (A:10-450) Ni 98.4 5.3E-07 3.8E-11 98.9 13.3 100 426-525 224-340 (441)
53 d2p4oa1 b.68.6.3 (A:4-305) Hyp 98.3 7.5E-05 5.5E-09 77.2 27.4 69 193-271 29-98 (302)
54 d2bgra1 b.70.3.1 (A:39-508) Di 98.3 2.6E-05 1.9E-09 85.5 24.6 113 196-348 21-148 (470)
55 d1qnia2 b.69.3.1 (A:10-450) Ni 98.3 1.9E-07 1.4E-11 102.5 6.7 54 193-254 73-128 (441)
56 d1q7fa_ b.68.9.1 (A:) Brain tu 98.3 0.0006 4.4E-08 69.3 31.4 108 422-530 159-276 (279)
57 d2ddra1 d.151.1.3 (A:7-305) Sp 98.2 1.7E-06 1.2E-10 88.6 10.9 71 672-777 120-196 (299)
58 d1zwxa1 d.151.1.3 (A:41-333) S 98.2 1.9E-06 1.4E-10 88.0 10.4 48 671-718 119-172 (293)
59 d2dg1a1 b.68.6.1 (A:6-324) Lac 97.7 0.0073 5.3E-07 62.3 27.5 59 193-259 41-99 (319)
60 d2dg1a1 b.68.6.1 (A:6-324) Lac 97.5 0.04 2.9E-06 56.4 30.4 55 423-477 231-294 (319)
61 d1rwia_ b.68.9.1 (A:) Serine/t 97.5 0.013 9.4E-07 58.2 25.0 104 423-528 143-253 (260)
62 d2hqsa1 b.68.4.1 (A:163-431) T 97.5 0.033 2.4E-06 54.4 28.0 57 191-256 38-98 (269)
63 d2ghsa1 b.68.6.1 (A:20-314) Re 97.5 0.036 2.6E-06 56.2 28.9 225 198-476 24-259 (295)
64 d1pjxa_ b.68.6.1 (A:) Diisopro 97.4 0.018 1.3E-06 59.1 26.1 105 424-528 176-300 (314)
65 d1pjxa_ b.68.6.1 (A:) Diisopro 97.4 0.032 2.4E-06 57.1 27.5 65 423-487 229-298 (314)
66 d1q7fa_ b.68.9.1 (A:) Brain tu 97.2 0.12 9.1E-06 51.2 30.2 65 422-487 202-272 (279)
67 d1wdua_ d.151.1.1 (A:) Endonuc 97.2 0.00021 1.5E-08 69.7 7.2 110 554-703 3-112 (228)
68 d1vyba_ d.151.1.1 (A:) Endonuc 97.0 0.00075 5.5E-08 65.9 9.3 112 554-703 6-119 (236)
69 d1jofa_ b.69.10.1 (A:) 3-carbo 97.0 0.0088 6.4E-07 62.9 18.2 105 422-526 195-340 (365)
70 d2p4oa1 b.68.6.3 (A:4-305) Hyp 97.0 0.076 5.5E-06 53.5 25.0 111 133-272 28-144 (302)
71 d2f1na1 d.151.1.1 (A:1-250) Cy 97.0 0.00084 6.1E-08 66.3 9.1 39 676-718 119-158 (250)
72 d1k32a2 b.68.7.1 (A:39-319) Tr 96.9 0.067 4.9E-06 52.1 23.1 64 425-489 197-263 (281)
73 d1rwia_ b.68.9.1 (A:) Serine/t 96.8 0.26 1.9E-05 48.1 27.0 69 193-270 58-127 (260)
74 d1jofa_ b.69.10.1 (A:) 3-carbo 96.8 0.026 1.9E-06 59.1 19.8 78 243-344 146-227 (365)
75 d2a40b1 d.151.1.1 (B:1-260) De 96.3 0.0017 1.2E-07 62.3 5.5 41 677-719 111-154 (260)
76 d2ghsa1 b.68.6.1 (A:20-314) Re 95.8 1.1 7.7E-05 44.6 25.4 88 421-508 149-249 (295)
77 d1sr4b_ d.151.1.1 (B:) Cytolet 95.5 0.038 2.8E-06 53.4 11.6 38 554-594 5-47 (261)
78 d1xfda1 b.70.3.1 (A:127-591) D 91.7 4.5 0.00033 42.7 20.6 102 147-272 33-144 (465)
79 d2hqsa1 b.68.4.1 (A:163-431) T 91.5 5.7 0.00041 37.3 27.0 21 236-256 33-54 (269)
80 d1hd7a_ d.151.1.1 (A:) DNA rep 86.9 0.24 1.8E-05 48.1 4.8 37 553-593 18-55 (275)
81 d1npea_ b.68.5.1 (A:) Nidogen 85.0 17 0.0012 34.7 29.1 73 192-272 36-111 (263)
82 d1akoa_ d.151.1.1 (A:) DNA-rep 84.5 0.12 8.9E-06 49.0 1.0 35 555-593 2-36 (268)
83 d1xfda1 b.70.3.1 (A:127-591) D 78.5 14 0.00099 38.7 15.3 68 194-269 116-202 (465)
84 d1k32a2 b.68.7.1 (A:39-319) Tr 71.2 4.5 0.00033 38.1 8.2 63 426-489 5-78 (281)
85 d1npea_ b.68.5.1 (A:) Nidogen 68.4 49 0.0036 31.1 25.6 79 446-525 152-236 (263)
86 d1ijqa1 b.68.5.1 (A:377-642) L 63.6 61 0.0044 30.4 30.3 78 191-272 29-109 (266)
87 d1k3ia3 b.69.1.1 (A:151-537) G 52.8 60 0.0044 31.4 13.3 72 194-271 22-107 (387)
88 d1utca2 b.69.6.1 (A:4-330) Cla 52.3 96 0.007 30.2 13.8 163 143-347 114-292 (327)
89 d1k3ia3 b.69.1.1 (A:151-537) G 45.4 45 0.0033 32.5 10.8 86 441-526 53-155 (387)
90 d1flga_ b.70.1.1 (A:) Ethanol 42.1 14 0.001 39.9 6.3 58 213-279 466-524 (582)
91 d2ad6a1 b.70.1.1 (A:1-571) Met 38.9 22 0.0016 38.2 7.3 28 251-278 474-501 (571)
92 d1kb0a2 b.70.1.1 (A:1-573) Qui 36.3 27 0.002 37.3 7.6 27 253-279 489-515 (573)
93 d1ijqa1 b.68.5.1 (A:377-642) L 34.9 1.7E+02 0.012 27.0 29.8 88 440-527 143-238 (266)
94 d1utca2 b.69.6.1 (A:4-330) Cla 34.5 2E+02 0.015 27.7 15.4 31 478-508 175-205 (327)
95 d2ad6a1 b.70.1.1 (A:1-571) Met 30.8 2.9E+02 0.021 28.5 25.0 76 440-516 444-527 (571)
96 d1flga_ b.70.1.1 (A:) Ethanol 30.2 24 0.0017 37.8 5.8 42 202-254 496-541 (582)
97 d1kv9a2 b.70.1.1 (A:1-560) Qui 28.0 49 0.0036 35.0 7.9 28 251-278 468-495 (560)
98 d1tl2a_ b.67.1.1 (A:) Tachylec 27.2 79 0.0058 28.7 7.7 67 191-261 133-200 (235)
99 d1v04a_ b.68.6.2 (A:) Serum pa 27.0 1.5E+02 0.011 28.7 11.0 70 193-271 151-237 (340)
100 d1et9a1 b.40.2.2 (A:1-95) Stre 23.5 14 0.001 27.7 1.3 22 572-593 54-77 (95)
101 d1w6sa_ b.70.1.1 (A:) Methanol 21.8 59 0.0043 34.7 7.0 27 252-278 483-510 (596)
102 d1s0yb_ d.80.1.1 (B:) Trans-3- 20.1 36 0.0026 23.3 2.8 25 693-718 2-26 (55)
No 1
>d1i9za_ d.151.1.2 (A:) Synaptojanin, IPP5C domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00 E-value=3.9e-54 Score=473.77 Aligned_cols=266 Identities=29% Similarity=0.498 Sum_probs=231.9
Q ss_pred CCCCchhhhhhhhccccccccccceeeEEEEEEeCCCCCCcccccccccCC-CCCceEEEEEeecc-cCccchhhhhhhh
Q 003217 528 PGPLDSILCKELAGKEFLYTRMENLKILAGTWNVGQGRASQDALISWLGSA-ASDVGIVVVGLQEV-EMGAGFLAMSAAK 605 (838)
Q Consensus 528 ~~~~d~~~~~~l~~r~~~y~~~~~~~i~~~twNv~~~~~~~~~l~~wl~~~-~~~~di~vig~QE~-~~~~~~~~~~~~~ 605 (838)
++|+++++.+++.+++.+|+...+++|+++|||||+.+|+ ++|.+||... ...+|||||||||+ ++..+.+.
T Consensus 1 ~d~~~~~~~~~l~~r~~~~~~~~~l~I~v~TWNv~~~~~~-~~l~~~l~~~~~~~~DI~viglQEi~~~~~~~~~----- 74 (345)
T d1i9za_ 1 YDPIHEYVNHELRKRENEFSEHKNVKIFVASYNLNGCSAT-TKLENWLFPENTPLADIYVVGFQEIVQLTPQQVI----- 74 (345)
T ss_dssp CCHHHHHHHHHHHHTGGGTEEEEEEEEEEEEEECTTCCCC-SCCHHHHSCSSSCCCSEEEEEEECSSCCC----------
T ss_pred CCcHHHHHHHHHHHHHHhhcCCCceEEEEEEEcCCCccCC-cchHHhhccCCCCCCCEEEEEcccCCccchhhhc-----
Confidence 4678889999999999999999999999999999988874 6899999864 34589999999998 46543321
Q ss_pred hhccCCCCcchhhHHHHHhhhcC----CCCCEEEEeeeecccEEEEEEEecCCcCccCceeeceeecccCcccCCCceeE
Q 003217 606 ETVGLEGSAVGHWWLDMIGKILD----DGSTFERVGSRQLAGLLIAVWVRKNLKDYVGDVDVAAVPCGFGRAIGNKGAVG 681 (838)
Q Consensus 606 ~~~~~~~~~~~~~w~~~~~~~l~----~~~~y~~v~s~~l~g~~l~vf~r~~~~~~i~~v~~~~v~~G~~~~~gnKG~v~ 681 (838)
.+.+...+.|.+.+.+.++ .+..|+++.+.+|+|+.|+||+|+++.++|++|+++.+++|++|.+||||||+
T Consensus 75 ----~~~~~~~~~w~~~~~~~~~~~~~~~~~Y~~v~~~~~~g~~l~vf~r~~~~~~i~~v~~~~~~~g~~g~~gnKGaV~ 150 (345)
T d1i9za_ 75 ----SADPAKRREWESCVKRLLNGKCTSGPGYVQLRSGQLVGTALMIFCKESCLPSIKNVEGTVKKTGLGGVSGNKGAVA 150 (345)
T ss_dssp ----CCCHHHHHHHHHHHHHHHHHTCCSSCCEEEEEEEEETTEEEEEEEEGGGGGGEEEEEEEEEECCCC----CCEEEE
T ss_pred ----ccCchhhHHHHHHHHHhccccccCCCCeEEEEEecccCcEEEEEEcchhccccccceeEEEecCcCCcccCCceEE
Confidence 1222345789999887763 35689999999999999999999999999999999999999999999999999
Q ss_pred EEEEEcCeEEEEEeccccCCcchHHHHHHHHHHHHHhcCcCCCCCcccccccCCCceeeecccCCCCCCCcccCCCCcCc
Q 003217 682 LRVRVYDRIMCFVNCHFAAHLEAVNRRNADFDHVYRTMTFCRPSNLCSAAAAGASSVVQMLRSTNPLSGLTVEGVPELSE 761 (838)
Q Consensus 682 i~~~i~~~~~~Fv~~HLaa~~~~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 761 (838)
+||++++++||||||||+||++++++||+||..|+++|.|..+. .+.+
T Consensus 151 vr~~i~~t~l~fvn~HL~ag~~~~~~R~~~~~~i~~~l~~~~~~--------------------------------~~~~ 198 (345)
T d1i9za_ 151 IRFDYEDTGLCFITSHLAAGYTNYDERDHDYRTIASGLRFRRGR--------------------------------SIFN 198 (345)
T ss_dssp EEEEETTEEEEEEEEECCCCSSCHHHHHHHHHHHHHHCCCGGGC--------------------------------CTTS
T ss_pred EEEEECCEEEEEEEecccCcccchHHHHHHHHHHHHhhcccccc--------------------------------cccc
Confidence 99999999999999999999999999999999999999876422 2467
Q ss_pred ccEEEEeccceeeecCCChHHHHHHhhhcchHHHhhccchHHHHhcCCCcCCcccCCCCCCCCCcccCCCCCccC
Q 003217 762 ADMVIFLGDFNYRLDGITYDEARDFISQRCFDWLRERDQLRAEMEAGNVFQGMREADIKFPPTYKFEKHLAGLAG 836 (838)
Q Consensus 762 ~d~vf~~GDlNyRi~~~~~~~~~~~i~~~~~~~Ll~~DQL~~~~~~~~~f~gf~E~~I~F~PTYK~~~~~~~~~~ 836 (838)
+|++||+||||||++. +.+++.+++.+++++.|+++|||+.+|+.+.+|.+|.|++|+|||||||+.+++.|.-
T Consensus 199 ~d~v~~~GDlN~R~~~-~~~~~~~~i~~~~~~~l~~~dql~~~~~~~~~~~~~~E~~I~F~PTyk~~~~~~~yd~ 272 (345)
T d1i9za_ 199 HDYVVWFGDFNYRISL-TYEEVVPCIAQGKLSYLFEYDQLNKQMLTGKVFPFFSELPITFPPTYKFDIGTDIYDT 272 (345)
T ss_dssp SSEEEEEEECCCCBSS-CHHHHHHHHHTTCHHHHHTTBHHHHHHHTTSSSTTCBCCCCCSCCCBCBCTTSSCBCC
T ss_pred CceeEEeccccccccC-chhhhHhhhhccchhHHHHHHHHHhhhhccCcccCcccCCCCCCCCCeEECCCCccCC
Confidence 8999999999999996 9999999999999999999999999999999999999999999999999999998854
No 2
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=1.8e-30 Score=271.65 Aligned_cols=284 Identities=15% Similarity=0.193 Sum_probs=202.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEEC
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPW 269 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~ 269 (838)
.++|+||+|+|++++|+||+.||+||+||+.++ +...++++|.++|++++++|++. +++++.++++.+|+.
T Consensus 17 ~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~--------~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (317)
T d1vyhc1 17 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETG--------DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 88 (317)
T ss_dssp SSCEEEEEECSSSSEEEEEESSSCEEEEETTTC--------CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC--------CEEEEEeCCCCcEEEEeeecccccccccccccccccccc
Confidence 889999999999999999999999999999987 67788999999999999999998 689999999999998
Q ss_pred CCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEEE
Q 003217 270 EAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKVF 348 (838)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~l 348 (838)
........... + ...+..+...+++..+++++ ++.+++||+++++.+.++
T Consensus 89 ~~~~~~~~~~~-------------------~----------~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 139 (317)
T d1vyhc1 89 QGFECIRTMHG-------------------H----------DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 139 (317)
T ss_dssp TSSCEEECCCC-------------------C----------SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ccccccccccc-------------------c----------cccceeeeccCCCceEEeeccCcceeEeecccceeeeEE
Confidence 65433222111 1 23455666677777777666 678999999999999998
Q ss_pred ecCCceEEeeecccCccccc----ccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEec--cCc---cccCC
Q 003217 349 NIDGQIENRVDMSLLPDFAM----EDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAA--KGG---FGDDN 419 (838)
Q Consensus 349 ~~~~~~~~~~~~s~~~~~~~----~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~--~g~---~~~~~ 419 (838)
..+......+.+++.....+ +..++ ++.... ... ...+.++...+..+.. ... .....
T Consensus 140 ~~~~~~~~~~~~~~~~~~l~~~~~d~~v~--~~~~~~-~~~----------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 206 (317)
T d1vyhc1 140 TGHREWVRMVRPNQDGTLIASCSNDQTVR--VWVVAT-KEC----------KAELREHRHVVECISWAPESSYSSISEAT 206 (317)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEE--EEETTT-CCE----------EEEECCCSSCEEEEEECCSCGGGGGGGCC
T ss_pred ccCCCcceeeecccCCCEEEEEeCCCeEE--EEeecc-cee----------eEEEecCCCCceEEEEeeccccceeeccc
Confidence 87766544444444322111 11111 111100 000 0011122222222211 000 00011
Q ss_pred CceEEEEEcCCCcEEEEECCCeEEEEcC-CCCeeeEeecCCccEEEEEE--cCCEEEEEeeCCeEEEEeCC-Cccccccc
Q 003217 420 RRTEALTTSIDGMIWTGGANGLLLQWDP-NGNRLQDFQYLPFAVQCLCT--FGSQIWVGYMNGIVQVLDLE-GNLLGGWV 495 (838)
Q Consensus 420 ~~v~ala~S~dg~l~Sgs~DgtIrlWD~-~g~~l~tl~~H~~~V~sls~--dG~~LasGs~DgtIrlWD~~-g~~i~~l~ 495 (838)
.........+...+++|+.|++|++||. +++++.++.+|...|.+++. +|++|++|+.||+|+|||+. ++++.++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 286 (317)
T d1vyhc1 207 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLN 286 (317)
T ss_dssp SCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEE
T ss_pred cceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCCEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEc
Confidence 1111111223334789999999999999 78999999999999998865 68899999999999999987 78999999
Q ss_pred ccccCEEEEEe--CCCEEEEEcCCCCeeeee
Q 003217 496 AHSSPVIKMAV--GAGYIFTLANHGGIRGWN 524 (838)
Q Consensus 496 gH~~~V~sla~--dg~~l~S~S~DgtIrlWd 524 (838)
+|.+.|++|++ ++++|+|||.|++|++||
T Consensus 287 ~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 287 AHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 99999999985 678999999999999997
No 3
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.98 E-value=6.8e-30 Score=275.08 Aligned_cols=263 Identities=11% Similarity=0.126 Sum_probs=205.7
Q ss_pred cCCEEEEecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 003217 141 TEEQLWAGGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGHRDGRIMCWKM 220 (838)
Q Consensus 141 ~~~~l~~g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs~DGtIrvWd~ 220 (838)
+++.|+.+.++.|.+||+.+..... .|. .| ..+|.|++|+|+|++|+||+.||+|++||+
T Consensus 28 ~g~~l~~~~~~~v~i~~~~~~~~~~-----------------~~~--~H-~~~v~~~~~sp~g~~latg~~dg~i~iwd~ 87 (311)
T d1nr0a1 28 AGDKIQYCNGTSVYTVPVGSLTDTE-----------------IYT--EH-SHQTTVAKTSPSGYYCASGDVHGNVRIWDT 87 (311)
T ss_dssp TSSEEEEEETTEEEEEETTCSSCCE-----------------EEC--CC-SSCEEEEEECTTSSEEEEEETTSEEEEEES
T ss_pred CCCEEEEEeCCEEEEEECCCCceeE-----------------EEc--CC-CCCEEEEEEeCCCCeEeccccCceEeeeee
Confidence 4667777788899999997643221 122 23 779999999999999999999999999999
Q ss_pred CCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeC--CCcEEEEECCCcceeeecCCCceeeeEEEEeeceeec
Q 003217 221 NARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSE--GGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDL 297 (838)
Q Consensus 221 ~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~--DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 297 (838)
.++. ......+.+|.++|.+|+|+|+|+ |++++. +..++||++++++....+.
T Consensus 88 ~~~~------~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~------------------ 143 (311)
T d1nr0a1 88 TQTT------HILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT------------------ 143 (311)
T ss_dssp SSTT------CCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCC------------------
T ss_pred eccc------cccccccccccCcccccccccccccccccccccccccccccccccccccccc------------------
Confidence 8862 123356889999999999999998 677765 5679999998754322221
Q ss_pred ccceeccceeeeecCCeEEEEEcCCCC-EEEEeC-CCcEEEEeccCccEEEEEecCCceEEeeecccCcccccccceeeE
Q 003217 298 RSHLSVNGFSSILTSDIKNLLSDHSRA-KVWSAG-FLSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAMEDEFKTK 375 (838)
Q Consensus 298 ~~~~~~~~~~~~~s~~v~~las~~~~~-~V~s~s-~~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~ 375 (838)
+| ...+.++++++++. .+++++ +++|++||+++++++..+.
T Consensus 144 -~h----------~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~-------------------------- 186 (311)
T d1nr0a1 144 -GQ----------ARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-------------------------- 186 (311)
T ss_dssp -CC----------SSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC--------------------------
T ss_pred -cc----------ccccccccccccceeeecccccccccccccccccccccccc--------------------------
Confidence 12 34577788877665 466665 6789999999877644332
Q ss_pred EEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCceEEEEEcCCCc-EEEEECCCeEEEEcC-CCCeee
Q 003217 376 IVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRRTEALTTSIDGM-IWTGGANGLLLQWDP-NGNRLQ 453 (838)
Q Consensus 376 ~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~v~ala~S~dg~-l~Sgs~DgtIrlWD~-~g~~l~ 453 (838)
.|...|.++.++|++. +++|+.|++|++||. +++.+.
T Consensus 187 -----------------------------------------~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~ 225 (311)
T d1nr0a1 187 -----------------------------------------EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTG 225 (311)
T ss_dssp -----------------------------------------CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred -----------------------------------------cccccccccccCccccccccccccccccccccccccccc
Confidence 1233456788899987 789999999999999 677776
Q ss_pred Eee-------cCCccEEEEEE--cCCEEEEEeeCCeEEEEeCC-Ccccccccccc---cCEEEEEeCCCEEEEEcCCCCe
Q 003217 454 DFQ-------YLPFAVQCLCT--FGSQIWVGYMNGIVQVLDLE-GNLLGGWVAHS---SPVIKMAVGAGYIFTLANHGGI 520 (838)
Q Consensus 454 tl~-------~H~~~V~sls~--dG~~LasGs~DgtIrlWD~~-g~~i~~l~gH~---~~V~sla~dg~~l~S~S~DgtI 520 (838)
++. +|...|+++++ +|++|++|+.||+|+|||++ +++++++..|. ..+.++.++++++++++.||.|
T Consensus 226 ~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~dG~i 305 (311)
T d1nr0a1 226 VFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 305 (311)
T ss_dssp ECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCE
T ss_pred cccccccccccccccccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECCCEE
Confidence 664 58899999876 68999999999999999987 78888887664 4677888999999999999999
Q ss_pred eeeec
Q 003217 521 RGWNV 525 (838)
Q Consensus 521 rlWdl 525 (838)
++||.
T Consensus 306 ~~wd~ 310 (311)
T d1nr0a1 306 NFVNP 310 (311)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 99995
No 4
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.98 E-value=6.7e-30 Score=279.23 Aligned_cols=292 Identities=18% Similarity=0.191 Sum_probs=211.1
Q ss_pred eeEEEEec--CCEEEEecCCCEEEEeCCCCccccccccccccCC-CCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEe
Q 003217 134 FLRTIVCT--EEQLWAGGENGLRVWNLKELYDESESDSVSVSKS-KGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGH 210 (838)
Q Consensus 134 ~~~~l~~~--~~~l~~g~d~~vrvWd~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs 210 (838)
.+.+++.+ ++.|.+|+|++|+|||+.+...... .. ..... .............+ ...|.|++|+|+|++|++|+
T Consensus 64 ~V~~l~fs~dg~~lasg~d~~i~iW~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~~~V~~l~~s~~~~~l~s~~ 140 (388)
T d1erja_ 64 VVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVAR-LS-DDSAANKDPENLNTSSSPSS-DLYIRSVCFSPDGKFLATGA 140 (388)
T ss_dssp CCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEE-EC-C-----------------CC-CCBEEEEEECTTSSEEEEEE
T ss_pred cEEEEEECCCCCEEEEEeCCeEEEEEecccceEee-ec-ccccccccccccccccccCC-CCCEEEEEECCCCCcceecc
Confidence 46666655 4466678899999999976543321 00 00000 00000000111122 67899999999999999999
Q ss_pred CCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEECCCcceeeecCCCceeeeEEE
Q 003217 211 RDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPWEAIEKALSLKPEERHTAALI 289 (838)
Q Consensus 211 ~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~ 289 (838)
.||+|++|+...+ +....+.+|...|+++++++++. +++|+.++.|++||..+.........
T Consensus 141 ~dg~v~i~~~~~~--------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--------- 203 (388)
T d1erja_ 141 EDRLIRIWDIENR--------KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI--------- 203 (388)
T ss_dssp TTSCEEEEETTTT--------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC---------
T ss_pred ccccccccccccc--------ccccccccccccccccccccccccccccccceeeeeeecccccccccccc---------
Confidence 9999999999887 67778899999999999999987 78999999999999976432221110
Q ss_pred EeeceeecccceeccceeeeecCCeEEEE-EcCCCCEEEEeC-CCcEEEEeccCccEEEEEecCCceEEeeecccCcccc
Q 003217 290 VERSYIDLRSHLSVNGFSSILTSDIKNLL-SDHSRAKVWSAG-FLSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFA 367 (838)
Q Consensus 290 ~~~s~~~l~~~~~~~~~~~~~s~~v~~la-s~~~~~~V~s~s-~~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~ 367 (838)
......++ ...++..+++++ ++.|++||..++..+..+.....
T Consensus 204 ---------------------~~~~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-------------- 248 (388)
T d1erja_ 204 ---------------------EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENE-------------- 248 (388)
T ss_dssp ---------------------SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------------------
T ss_pred ---------------------ccccccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccc--------------
Confidence 11222233 334556677665 67899999999887665421100
Q ss_pred cccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCceEEEEEcCCCc-EEEEECCCeEEEEc
Q 003217 368 MEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRRTEALTTSIDGM-IWTGGANGLLLQWD 446 (838)
Q Consensus 368 ~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~v~ala~S~dg~-l~Sgs~DgtIrlWD 446 (838)
....|...|.+++++|++. |++|+.|++|++||
T Consensus 249 ----------------------------------------------~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd 282 (388)
T d1erja_ 249 ----------------------------------------------SGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 282 (388)
T ss_dssp ------------------------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ----------------------------------------------cccCCCCCEEEEEECCCCCEEEEEECCCcEEEEe
Confidence 0123455678899999987 78999999999999
Q ss_pred C-CC------------CeeeEeecCCccEEEEEE--cCCEEEEEeeCCeEEEEeCC-CcccccccccccCEEEEEe----
Q 003217 447 P-NG------------NRLQDFQYLPFAVQCLCT--FGSQIWVGYMNGIVQVLDLE-GNLLGGWVAHSSPVIKMAV---- 506 (838)
Q Consensus 447 ~-~g------------~~l~tl~~H~~~V~sls~--dG~~LasGs~DgtIrlWD~~-g~~i~~l~gH~~~V~sla~---- 506 (838)
+ ++ .+......|...|.++++ +|++|++|+.||+|++||+. ++++.++.+|.+.|.+++.
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~ 362 (388)
T d1erja_ 283 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGS 362 (388)
T ss_dssp C---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSC
T ss_pred ccCCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCc
Confidence 8 33 234556678999999876 68999999999999999987 8899999999999999863
Q ss_pred ----CCCEEEEEcCCCCeeeeecC
Q 003217 507 ----GAGYIFTLANHGGIRGWNVT 526 (838)
Q Consensus 507 ----dg~~l~S~S~DgtIrlWdl~ 526 (838)
++++|+|||.||+||+|+++
T Consensus 363 ~~spd~~~l~s~s~Dg~I~iW~~~ 386 (388)
T d1erja_ 363 SLGPEYNVFATGSGDCKARIWKYK 386 (388)
T ss_dssp TTCTTCEEEEEEETTSEEEEEEEE
T ss_pred ccCCCCCEEEEEeCCCEEEEEeee
Confidence 67799999999999999974
No 5
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=3.1e-29 Score=271.35 Aligned_cols=273 Identities=14% Similarity=0.187 Sum_probs=209.1
Q ss_pred eeEEEEec--CCEEEEecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEeC
Q 003217 134 FLRTIVCT--EEQLWAGGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGHR 211 (838)
Q Consensus 134 ~~~~l~~~--~~~l~~g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs~ 211 (838)
.+.+++.+ +..|.+++|+.|+|||+.+...... ...+....| .++|.|++|+|+|++|++|+.
T Consensus 53 ~V~~v~fs~~g~~latg~dg~V~iWd~~~~~~~~~--------------~~~~~~~~h-~~~I~~v~~s~dg~~l~s~~~ 117 (337)
T d1gxra_ 53 VVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSP--------------VSQLDCLNR-DNYIRSCKLLPDGCTLIVGGE 117 (337)
T ss_dssp CCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSC--------------SEEEECSCT-TSBEEEEEECTTSSEEEEEES
T ss_pred cEEEEEECCCCCEEEEEECCEEEEEEccCCcccce--------------eEEeeecCC-CCcEEEEEEcCCCCEEEEeec
Confidence 45556655 4477778899999999976432211 000111123 778999999999999999999
Q ss_pred CCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEECCCcceeeecCCCceeeeEEEE
Q 003217 212 DGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPWEAIEKALSLKPEERHTAALIV 290 (838)
Q Consensus 212 DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~ 290 (838)
||+|++||+.... .+....+.+|...|.+++|+|++. +++++.|+.|++|++.+.+......
T Consensus 118 dg~i~iwd~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~~~----------- 180 (337)
T d1gxra_ 118 ASTLSIWDLAAPT------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ----------- 180 (337)
T ss_dssp SSEEEEEECCCC--------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-----------
T ss_pred ccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccccccccc-----------
Confidence 9999999987642 144566889999999999999998 7899999999999997654322111
Q ss_pred eeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEEEecCCceEEeeecccCcccccc
Q 003217 291 ERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAME 369 (838)
Q Consensus 291 ~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~ 369 (838)
.+ ...+.++++++.+..+++++ ++.+++||+++++.++.+..
T Consensus 181 --------~~----------~~~v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~------------------- 223 (337)
T d1gxra_ 181 --------GH----------TDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF------------------- 223 (337)
T ss_dssp --------CC----------SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-------------------
T ss_pred --------cc----------ccccccccccccccccccccccccccccccccceeeccccc-------------------
Confidence 11 44677888888888777776 67899999999887654421
Q ss_pred cceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCceEEEEEcCCCc-EEEEECCCeEEEEcCC
Q 003217 370 DEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRRTEALTTSIDGM-IWTGGANGLLLQWDPN 448 (838)
Q Consensus 370 ~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~v~ala~S~dg~-l~Sgs~DgtIrlWD~~ 448 (838)
...|.+++++|++. +++|+.|+.|++||++
T Consensus 224 -------------------------------------------------~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~ 254 (337)
T d1gxra_ 224 -------------------------------------------------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVN 254 (337)
T ss_dssp -------------------------------------------------SSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred -------------------------------------------------ccceEEEEEcccccccceecccccccccccc
Confidence 12245677888876 7899999999999995
Q ss_pred CCeeeEeecCCccEEEEEE--cCCEEEEEeeCCeEEEEeCC-CcccccccccccCEEEEEe--CCCEEEEEcCCCCeeee
Q 003217 449 GNRLQDFQYLPFAVQCLCT--FGSQIWVGYMNGIVQVLDLE-GNLLGGWVAHSSPVIKMAV--GAGYIFTLANHGGIRGW 523 (838)
Q Consensus 449 g~~l~tl~~H~~~V~sls~--dG~~LasGs~DgtIrlWD~~-g~~i~~l~gH~~~V~sla~--dg~~l~S~S~DgtIrlW 523 (838)
.........|...|+++++ +|++|++|+.||+|++||+. ++++..+ .|.+.|+++++ ++++|+|+|.|++|++|
T Consensus 255 ~~~~~~~~~~~~~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~-~~~~~v~~~~~s~d~~~l~t~s~D~~I~vW 333 (337)
T d1gxra_ 255 KPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp SSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred ccccccccccccccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEc-cCCCCEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 4444456789999999875 78899999999999999987 6666554 58899999885 68899999999999999
Q ss_pred ec
Q 003217 524 NV 525 (838)
Q Consensus 524 dl 525 (838)
|+
T Consensus 334 dl 335 (337)
T d1gxra_ 334 EV 335 (337)
T ss_dssp EE
T ss_pred EE
Confidence 96
No 6
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.97 E-value=1.6e-28 Score=259.23 Aligned_cols=266 Identities=15% Similarity=0.168 Sum_probs=195.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEe-ccccccEEEEEEecCCCEEEeeCCCcEEEEEC
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSW-QAHRGPVLSLCISSYGDLWSGSEGGGIKIWPW 269 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l-~gH~~~V~slafs~dG~L~SgS~DgtIrvWd~ 269 (838)
.++|.||+|+|+|++|+||+.||+|++||+.++ +....+ .+|.++|++|+|+|+|++++++.|+++++|+.
T Consensus 12 ~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~--------~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v~~~~~ 83 (299)
T d1nr0a2 12 NKAITALSSSADGKTLFSADAEGHINSWDISTG--------ISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPA 83 (299)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECS
T ss_pred CCCcEEEEECCCCCEEEEEcCCCeEEEEECCCC--------cEEEEEcCCCCCcEEEEEeeccceeecccceeeEEEecc
Confidence 889999999999999999999999999999987 455555 57999999999999999999999999999998
Q ss_pred CCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeCCCcEEEEeccCccEEEEEe
Q 003217 270 EAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAGFLSFALWDARTRELLKVFN 349 (838)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s~~tI~lWD~~tg~~l~~l~ 349 (838)
...... .. ... .......+..++.++++..+.++.++.+++|+... ......
T Consensus 84 ~~~~~~-~~---~~~----------------------~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~--~~~~~~ 135 (299)
T d1nr0a2 84 GGSGVD-SS---KAV----------------------ANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK--LTEVPI 135 (299)
T ss_dssp SSSSSC-TT---SCC----------------------EEECSSCEEEEEECTTSSCEEEEESSEEEEEETTE--EEEEEC
T ss_pred CCcccc-cc---ccc----------------------ccccccccccccccccccccccccccccccccccc--cccccc
Confidence 542210 00 000 00113456777888888888888888999998542 222211
Q ss_pred cCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEec--cC-----ccccCCCce
Q 003217 350 IDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAA--KG-----GFGDDNRRT 422 (838)
Q Consensus 350 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~--~g-----~~~~~~~~v 422 (838)
.+. ...+.+.+++..+++|..++..+++. .+ ....|...|
T Consensus 136 ~~~---------------------------------~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i 182 (299)
T d1nr0a2 136 SYN---------------------------------SSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEI 182 (299)
T ss_dssp SSC---------------------------------EEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCE
T ss_pred ccc---------------------------------cccccccccccccccccccccccccccccccccccccccccccc
Confidence 110 01123334444455666666555543 11 123467789
Q ss_pred EEEEEcCCCc-EEEEECCCeEEEEcC-CCCe---eeEeecCCccEEEEEE--cCCEEEEEeeCCeEEEEeCC-Cc--ccc
Q 003217 423 EALTTSIDGM-IWTGGANGLLLQWDP-NGNR---LQDFQYLPFAVQCLCT--FGSQIWVGYMNGIVQVLDLE-GN--LLG 492 (838)
Q Consensus 423 ~ala~S~dg~-l~Sgs~DgtIrlWD~-~g~~---l~tl~~H~~~V~sls~--dG~~LasGs~DgtIrlWD~~-g~--~i~ 492 (838)
.+++++|++. +++|+.|+.|++||+ ++.. +..+.+|..+|+++++ +|++|++|+.||+|+|||++ ++ .+.
T Consensus 183 ~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 262 (299)
T d1nr0a2 183 TSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPII 262 (299)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCCcceEE
Confidence 9999999987 789999999999999 5544 3556789999999865 78899999999999999987 33 233
Q ss_pred cccc-cccCEEEEE-eCCCEEEEEcCCCCeeeeec
Q 003217 493 GWVA-HSSPVIKMA-VGAGYIFTLANHGGIRGWNV 525 (838)
Q Consensus 493 ~l~g-H~~~V~sla-~dg~~l~S~S~DgtIrlWdl 525 (838)
...+ |...|.++. .++++|+|+|.|++||+||+
T Consensus 263 ~~~~~~~~~v~~~~~~~~~~l~s~s~D~~i~iWdl 297 (299)
T d1nr0a2 263 IKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297 (299)
T ss_dssp ETTSSTTSCEEEEEEEETTEEEEEETTSCEEEEEC
T ss_pred EecCCCCCcEEEEEECCCCEEEEEeCCCEEEEEec
Confidence 3334 456677776 47889999999999999997
No 7
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.97 E-value=6.7e-28 Score=256.25 Aligned_cols=270 Identities=18% Similarity=0.211 Sum_probs=195.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEEC
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPW 269 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~ 269 (838)
.++|+||+|+|++++|+||+.||+|++||+.++ +....+.+|..+|++++|+|+|. +++|+.|+++++|+.
T Consensus 55 ~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~--------~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~~i~~~~~ 126 (340)
T d1tbga_ 55 LAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTT--------NKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEETTTT--------EEEEEEECSCSCEEEEEECTTSSEEEEEETTCCEEEEES
T ss_pred CCCEEEEEECCCCCEEEEEECCCceeeeecccc--------eeEEEEecccccEEeeEeeccceeeeeecccceeecccc
Confidence 889999999999999999999999999999987 67788999999999999999998 789999999999998
Q ss_pred CCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeCCCcEEEEeccCccEEEEEe
Q 003217 270 EAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAGFLSFALWDARTRELLKVFN 349 (838)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s~~tI~lWD~~tg~~l~~l~ 349 (838)
........ ... .+.++ ...............+....+.+...|+..+........
T Consensus 127 ~~~~~~~~------~~~---------~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (340)
T d1tbga_ 127 KTREGNVR------VSR---------ELAGH----------TGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT 181 (340)
T ss_dssp SSSCSCCC------EEE---------EECCC----------SSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEE
T ss_pred cccccccc------cce---------ecccc----------ccccccccccccccccccccccccccccccccccccccc
Confidence 65321110 000 00111 111222222222333334445677777776655544332
Q ss_pred cCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEec--c----CccccCCCceE
Q 003217 350 IDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAA--K----GGFGDDNRRTE 423 (838)
Q Consensus 350 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~--~----g~~~~~~~~v~ 423 (838)
....... ...+.+.....+.|..++..+++. . ..+..|...|.
T Consensus 182 ~~~~~~~-------------------------------~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~ 230 (340)
T d1tbga_ 182 GHTGDVM-------------------------------SLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDIN 230 (340)
T ss_dssp CCSSCEE-------------------------------EEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEE
T ss_pred ccceeEe-------------------------------eeccccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeE
Confidence 2221110 011112222334555566555553 1 23456788899
Q ss_pred EEEEcCCCc-EEEEECCCeEEEEcC-CCCeeeEee--cCCccEEEEEE--cCCEEEEEeeCCeEEEEeCC-Ccccccccc
Q 003217 424 ALTTSIDGM-IWTGGANGLLLQWDP-NGNRLQDFQ--YLPFAVQCLCT--FGSQIWVGYMNGIVQVLDLE-GNLLGGWVA 496 (838)
Q Consensus 424 ala~S~dg~-l~Sgs~DgtIrlWD~-~g~~l~tl~--~H~~~V~sls~--dG~~LasGs~DgtIrlWD~~-g~~i~~l~g 496 (838)
+++++|++. +++|+.|++|++||. ..+.+..+. .|...|.++++ +|++|++|+.||+|++||+. ++++.++.+
T Consensus 231 ~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 310 (340)
T d1tbga_ 231 AICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAG 310 (340)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcC
Confidence 999999987 789999999999999 566666554 56678988865 68899999999999999986 789999999
Q ss_pred cccCEEEEEe--CCCEEEEEcCCCCeeeee
Q 003217 497 HSSPVIKMAV--GAGYIFTLANHGGIRGWN 524 (838)
Q Consensus 497 H~~~V~sla~--dg~~l~S~S~DgtIrlWd 524 (838)
|.+.|++|++ ++++|+|||.||+|++||
T Consensus 311 H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 311 HDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 9999999985 778999999999999997
No 8
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.96 E-value=6.5e-28 Score=256.68 Aligned_cols=293 Identities=12% Similarity=0.096 Sum_probs=191.5
Q ss_pred CCC-eEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCCEEEeeCCCcEEEEEC
Q 003217 191 VSS-VMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGDLWSGSEGGGIKIWPW 269 (838)
Q Consensus 191 ~~~-V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~L~SgS~DgtIrvWd~ 269 (838)
... +.|+.++ +++|+||+.||+|++||+.++ +.+.++++|.++|++|+|+|++.|+||+.|++|++|++
T Consensus 12 ~~~vitc~~~~--~~~l~tgs~Dg~i~vWd~~~~--------~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~iw~~ 81 (355)
T d1nexb2 12 MTSVITCLQFE--DNYVITGADDKMIRVYDSINK--------KFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDI 81 (355)
T ss_dssp SSSCEEEEEEE--TTEEEEEETTTEEEEEETTTT--------EEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEEEET
T ss_pred CCCcEEEEEEC--CCEEEEEeCCCeEEEEECCCC--------cEEEEEECCCCCEEEEEEcCCCEEEEEecccccccccc
Confidence 555 4787775 689999999999999999987 77889999999999999999888999999999999999
Q ss_pred CCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEEE
Q 003217 270 EAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKVF 348 (838)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~l 348 (838)
............... .........+++..+++++ +++|++||+.++..+...
T Consensus 82 ~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~~~ 134 (355)
T d1nexb2 82 KKGCCTHVFEGHNST---------------------------VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDH 134 (355)
T ss_dssp TTTEEEEEECCCSSC---------------------------EEEEEEEEETTEEEEEEEETTSEEEEEECCC-------
T ss_pred ccccccccccccccc---------------------------ccccccccccccceeeeecCCCcEEEEEccCCceeccc
Confidence 764433222111000 0112223333444455544 678999999987765443
Q ss_pred ecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEec--cC----ccccCCCce
Q 003217 349 NIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAA--KG----GFGDDNRRT 422 (838)
Q Consensus 349 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~--~g----~~~~~~~~v 422 (838)
......... ......... ........ ... .....+.+...+.+..++..+++. .+ .+..+...+
T Consensus 135 ~~~~~~~~~-~~~~~~~~~-----~~~~~~~~--~~~--v~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 204 (355)
T d1nexb2 135 GEEHDYPLV-FHTPEENPY-----FVGVLRGH--MAS--VRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRI 204 (355)
T ss_dssp ----CCCEE-ESCTTTCTT-----EEEEEECC--SSC--EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred cccceeccc-eeccccccc-----eeeeeeec--ccc--ccccccccceeeeecccceeeeeecccccceeeeecccccc
Confidence 221111000 000000000 00000000 000 112223344555666666555543 11 223455677
Q ss_pred EEEEEcCCCc-EEEEECCCeEEEEcC-CCCeeeEeecCCccEEEEEEcCCEEEEEeeCCeEEEEeCCCcccccccccccC
Q 003217 423 EALTTSIDGM-IWTGGANGLLLQWDP-NGNRLQDFQYLPFAVQCLCTFGSQIWVGYMNGIVQVLDLEGNLLGGWVAHSSP 500 (838)
Q Consensus 423 ~ala~S~dg~-l~Sgs~DgtIrlWD~-~g~~l~tl~~H~~~V~sls~dG~~LasGs~DgtIrlWD~~g~~i~~l~gH~~~ 500 (838)
.++.+++++. +++++.|++|++||. ++.++..+.+|...|.++++++++|++|+.||+|++||++.. ...+.+|...
T Consensus 205 ~~~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~-~~~~~~~~~~ 283 (355)
T d1nexb2 205 YSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDY-SRKFSYHHTN 283 (355)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCCCEEEECSSEEEEECTTSEEEEEETTTC-CEEEEEECTT
T ss_pred ccccccccceeeecccccceEEeeeccccccccccccccccccccccccceeeeeeccccccccccccc-ceecccccCC
Confidence 7888998877 789999999999999 789999999999999999999999999999999999998732 3456677777
Q ss_pred EEEEE---eCCCEEEEEcCCCCeeeeecCCCCCCc
Q 003217 501 VIKMA---VGAGYIFTLANHGGIRGWNVTSPGPLD 532 (838)
Q Consensus 501 V~sla---~dg~~l~S~S~DgtIrlWdl~s~~~~d 532 (838)
+.++. .+++.++++ .|++|++||+++...+.
T Consensus 284 ~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~ 317 (355)
T d1nexb2 284 LSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVH 317 (355)
T ss_dssp CCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCC
T ss_pred ceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEE
Confidence 76543 466666655 58999999998765543
No 9
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=6.3e-27 Score=241.89 Aligned_cols=258 Identities=21% Similarity=0.257 Sum_probs=182.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEEC
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPW 269 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~ 269 (838)
...|+|+.+ +|++|+||+.||+||+||+.++ +...++++|+++|++|+| +++ |+|||.|++|++|++
T Consensus 15 ~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~--------~~~~~l~~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~ 82 (293)
T d1p22a2 15 SKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL--------ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDV 82 (293)
T ss_dssp CCCEEEEEC--CSSEEEEEESSSCEEEEESSSC--------CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEES
T ss_pred CCCEEEEEE--cCCEEEEEeCCCeEEEEECCCC--------cEEEEEecCCCCEeeeec--ccceeeccccccccccccc
Confidence 668999865 6899999999999999999987 678899999999999987 455 789999999999999
Q ss_pred CCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeCCCcEEEEeccCccEEE---
Q 003217 270 EAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAGFLSFALWDARTRELLK--- 346 (838)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s~~tI~lWD~~tg~~l~--- 346 (838)
..+.......... ..........+..+....++.+.+||..+.....
T Consensus 83 ~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (293)
T d1p22a2 83 NTGEMLNTLIHHC------------------------------EAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR 132 (293)
T ss_dssp SSCCEEEEECCCC------------------------------SCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEE
T ss_pred ccccccccccccc------------------------------cccccccccccceeecccccceeEeeccccccccccc
Confidence 7654332221110 0111112222223333446789999998765322
Q ss_pred EEecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEecc--C----ccccCCC
Q 003217 347 VFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAK--G----GFGDDNR 420 (838)
Q Consensus 347 ~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~--g----~~~~~~~ 420 (838)
.+..+........ +. ......++.++..+++.. + .+..+..
T Consensus 133 ~~~~~~~~v~~~~-------------------------------~~--~~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~ 179 (293)
T d1p22a2 133 VLVGHRAAVNVVD-------------------------------FD--DKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 179 (293)
T ss_dssp EECCCSSCEEEEE-------------------------------EE--TTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred cccccccccccce-------------------------------ec--ccccccccCCCceeeecCCCCcEEEEEccccc
Confidence 2222211111000 00 111223333443333321 1 1233455
Q ss_pred ceEEEEEcCCCcEEEEECCCeEEEEcC-CCCeeeEeecCCccEEEEEEcCCEEEEEeeCCeEEEEeCC----------Cc
Q 003217 421 RTEALTTSIDGMIWTGGANGLLLQWDP-NGNRLQDFQYLPFAVQCLCTFGSQIWVGYMNGIVQVLDLE----------GN 489 (838)
Q Consensus 421 ~v~ala~S~dg~l~Sgs~DgtIrlWD~-~g~~l~tl~~H~~~V~sls~dG~~LasGs~DgtIrlWD~~----------g~ 489 (838)
.+..+.+++ ..+++++.|++|++||+ +++++..+.+|...|.+++.++.+|++|+.||+|++||+. ..
T Consensus 180 ~v~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 258 (293)
T d1p22a2 180 GIACLQYRD-RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTL 258 (293)
T ss_dssp CEEEEEEET-TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTT
T ss_pred ccccccCCC-CeEEEecCCCEEEEEecccceeeeeecccceeeeeccccceEEEEEcCCCEEEEEECCCCccccccCCce
Confidence 566666543 36899999999999999 7889999999999999999999999999999999999953 13
Q ss_pred ccccccccccCEEEEEeCCCEEEEEcCCCCeeeee
Q 003217 490 LLGGWVAHSSPVIKMAVGAGYIFTLANHGGIRGWN 524 (838)
Q Consensus 490 ~i~~l~gH~~~V~sla~dg~~l~S~S~DgtIrlWd 524 (838)
++.++.+|.+.|++|++++++|+|+|.|++||+||
T Consensus 259 ~~~~~~~H~~~V~~v~~d~~~l~s~s~Dg~i~iWD 293 (293)
T d1p22a2 259 CLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWD 293 (293)
T ss_dssp EEEEECCCSSCCCCEEECSSCEEECCSSSEEEEEC
T ss_pred eeEEecCCCCCEEEEEEcCCEEEEEecCCEEEEeC
Confidence 57889999999999999999999999999999997
No 10
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96 E-value=1.3e-26 Score=245.21 Aligned_cols=73 Identities=22% Similarity=0.262 Sum_probs=63.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCCEEEeeCCCcEEEEECC
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGDLWSGSEGGGIKIWPWE 270 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~L~SgS~DgtIrvWd~~ 270 (838)
.++|.+ +++++|++|+||+.||+||+||+.++ +.+.++.+|.++|++++|+++ .|+|||.|+++++|+..
T Consensus 16 ~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~--------~~~~~~~~h~~~V~~v~~~~~-~l~s~s~D~~~~~~~~~ 85 (342)
T d2ovrb2 16 DDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTG--------KCLRTLVGHTGGVWSSQMRDN-IIISGSTDRTLKVWNAE 85 (342)
T ss_dssp TTSCEE-EEEEETTEEEEEETTSCEEEEETTTC--------CEEEECCCCSSCEEEEEEETT-EEEEEETTSCEEEEETT
T ss_pred CCceEE-EEEECCCEEEEEeCCCeEEEEECCCC--------CEEEEEeCCCCCEEEEEeCCC-ccccceecccccccccc
Confidence 777754 24556899999999999999999987 678899999999999999974 68999999999999986
Q ss_pred Ccc
Q 003217 271 AIE 273 (838)
Q Consensus 271 ~~~ 273 (838)
...
T Consensus 86 ~~~ 88 (342)
T d2ovrb2 86 TGE 88 (342)
T ss_dssp TTE
T ss_pred ccc
Confidence 643
No 11
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.96 E-value=3.9e-27 Score=258.61 Aligned_cols=272 Identities=12% Similarity=0.107 Sum_probs=192.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEEC
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPW 269 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~ 269 (838)
..||.|++|+|+|++||+|+.||.|++||.+++. +..+..|+||.++|++|+|+|+|+ |+|||.|++|+|||+
T Consensus 7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~------~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~ 80 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK------WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTL 80 (371)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE------EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCC------EEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEee
Confidence 4689999999999999999999999999998752 245677899999999999999998 789999999999999
Q ss_pred CCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEEE
Q 003217 270 EAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKVF 348 (838)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~l 348 (838)
.+........ +..+ ...+.++.+++++..+++++ +++|++|+.........+
T Consensus 81 ~~~~~~~~~~-----------------~~~~----------~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~ 133 (371)
T d1k8kc_ 81 KGRTWKPTLV-----------------ILRI----------NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC 133 (371)
T ss_dssp ETTEEEEEEE-----------------CCCC----------SSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEE
T ss_pred cccccccccc-----------------cccc----------cccccccccccccccceeecccCcceeeeeecccccccc
Confidence 6533211110 0011 44678888888888888776 678999998765432221
Q ss_pred ----ecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEecc------------
Q 003217 349 ----NIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAK------------ 412 (838)
Q Consensus 349 ----~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~------------ 412 (838)
..+...+.. +.|.+++...++|+.++..+++..
T Consensus 134 ~~~~~~~~~~v~~-------------------------------v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~ 182 (371)
T d1k8kc_ 134 KHIKKPIRSTVLS-------------------------------LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPT 182 (371)
T ss_dssp EEECTTCCSCEEE-------------------------------EEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCB
T ss_pred ccccccccccccc-------------------------------ccccccccceeccccCcEEEEEeeccCccccccccc
Confidence 122222222 333333333344444444333320
Q ss_pred --------C----ccccCCCceEEEEEcCCCc-EEEEECCCeEEEEcC-CCCeeeEeecCCccEEEEEE--cCCEEEEEe
Q 003217 413 --------G----GFGDDNRRTEALTTSIDGM-IWTGGANGLLLQWDP-NGNRLQDFQYLPFAVQCLCT--FGSQIWVGY 476 (838)
Q Consensus 413 --------g----~~~~~~~~v~ala~S~dg~-l~Sgs~DgtIrlWD~-~g~~l~tl~~H~~~V~sls~--dG~~LasGs 476 (838)
+ ....|...|.+++|+|+|. |++++.|++|++||+ +++++.++.+|..+|.++++ +|++|++|+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g~ 262 (371)
T d1k8kc_ 183 PWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGH 262 (371)
T ss_dssp TTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEET
T ss_pred cccccccceeeeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeecccccceeeeecCCCCEEEEEc
Confidence 0 1234566789999999987 789999999999999 78999999999999998864 677777654
Q ss_pred eCCeEEEEeC--C-Ccc--c-------------------------------------ccccccccCEEEEEe--CC----
Q 003217 477 MNGIVQVLDL--E-GNL--L-------------------------------------GGWVAHSSPVIKMAV--GA---- 508 (838)
Q Consensus 477 ~DgtIrlWD~--~-g~~--i-------------------------------------~~l~gH~~~V~sla~--dg---- 508 (838)
|+.+++|+. . +.+ . .....|.+.|.+|++ .+
T Consensus 263 -d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~ 341 (371)
T d1k8kc_ 263 -DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKC 341 (371)
T ss_dssp -TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSC
T ss_pred -CCceEEEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccceecccccCCEEEEEEeCCCCcce
Confidence 777777642 1 110 0 011249999999874 21
Q ss_pred CEEEEEcCCCCeeeeecCC
Q 003217 509 GYIFTLANHGGIRGWNVTS 527 (838)
Q Consensus 509 ~~l~S~S~DgtIrlWdl~s 527 (838)
..++|+|.||+||+||+.+
T Consensus 342 ~~~~T~g~Dg~v~iW~~~~ 360 (371)
T d1k8kc_ 342 SQFCTTGMDGGMSIWDVRS 360 (371)
T ss_dssp SEEEEEETTSEEEEEEHHH
T ss_pred EEEEEEcCCCeEEEEeCCc
Confidence 3688999999999999743
No 12
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.95 E-value=9.5e-26 Score=235.28 Aligned_cols=298 Identities=14% Similarity=0.168 Sum_probs=217.6
Q ss_pred CCCCCceeecCCCCCccccCceeEEEEec--CCEEEE-ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeec
Q 003217 113 PARPPSLEVKPHPLRETQIGCFLRTIVCT--EEQLWA-GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVK 189 (838)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~l~~-g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 189 (838)
|..|+...++.|- ..+.+|+.+ ++.|.+ +.|++|||||+.+...... + ..|
T Consensus 5 p~~~~~~~L~GH~-------~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~-----------------~--~~h 58 (317)
T d1vyhc1 5 PRPPEKYALSGHR-------SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERT-----------------L--KGH 58 (317)
T ss_dssp CCSSCSCEEECCS-------SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEE-----------------E--CCC
T ss_pred CCCCccEEEcCCC-------CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEE-----------------E--eCC
Confidence 4444444555552 356777765 445665 5699999999976543211 2 123
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEE
Q 003217 190 GVSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWP 268 (838)
Q Consensus 190 g~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd 268 (838)
..+|.+++++|++.+++++..++++..|+.... +....+.+|...+.++.|++++. +++++.|+.+++||
T Consensus 59 -~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 129 (317)
T d1vyhc1 59 -TDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--------ECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 129 (317)
T ss_dssp -SSCEEEEEECTTSSEEEEEETTSCCCEEETTSS--------CEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred -CCcEEEEeeeccccccccccccccccccccccc--------ccccccccccccceeeeccCCCceEEeeccCcceeEee
Confidence 779999999999999999999999999998875 56677889999999999999998 78999999999999
Q ss_pred CCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEE
Q 003217 269 WEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKV 347 (838)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~ 347 (838)
+.++.....+. ++ ...+.+++..+++..+++++ ++.|++||..+++++..
T Consensus 130 ~~~~~~~~~~~-------------------~~----------~~~~~~~~~~~~~~~l~~~~~d~~v~~~~~~~~~~~~~ 180 (317)
T d1vyhc1 130 VQTGYCVKTFT-------------------GH----------REWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 180 (317)
T ss_dssp TTTCCEEEEEE-------------------CC----------SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred cccceeeeEEc-------------------cC----------CCcceeeecccCCCEEEEEeCCCeEEEEeeccceeeEE
Confidence 97654322221 11 34567778888888888776 67899999999999988
Q ss_pred EecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEec--c----CccccCCCc
Q 003217 348 FNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAA--K----GGFGDDNRR 421 (838)
Q Consensus 348 l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~--~----g~~~~~~~~ 421 (838)
+..+......+.+++.......... ...........+.....+..++..+++. . ..+..|...
T Consensus 181 ~~~~~~~i~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~ 249 (317)
T d1vyhc1 181 LREHRHVVECISWAPESSYSSISEA-----------TGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 249 (317)
T ss_dssp ECCCSSCEEEEEECCSCGGGGGGGC-----------CSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred EecCCCCceEEEEeeccccceeecc-----------ccceeeeeccCCceeEeccCCCEEEEEECCCCcEEEEEeCCCCC
Confidence 8877665555555443222110000 0000011122233445677777666654 1 234567888
Q ss_pred eEEEEEcCCCc-EEEEECCCeEEEEcC-CCCeeeEeecCCccEEEEEE--cCCEEEEEeeCCeEEEEe
Q 003217 422 TEALTTSIDGM-IWTGGANGLLLQWDP-NGNRLQDFQYLPFAVQCLCT--FGSQIWVGYMNGIVQVLD 485 (838)
Q Consensus 422 v~ala~S~dg~-l~Sgs~DgtIrlWD~-~g~~l~tl~~H~~~V~sls~--dG~~LasGs~DgtIrlWD 485 (838)
|.+++++|++. |++|+.||+|++||+ ++++++++.+|...|+++++ +|++|++|+.||+|+|||
T Consensus 250 v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg~i~iWd 317 (317)
T d1vyhc1 250 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317 (317)
T ss_dssp EEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEeC
Confidence 99999999987 889999999999999 78999999999999999876 688999999999999997
No 13
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.95 E-value=1.9e-26 Score=249.25 Aligned_cols=242 Identities=19% Similarity=0.280 Sum_probs=187.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEE
Q 003217 190 GVSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWP 268 (838)
Q Consensus 190 g~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd 268 (838)
|..+|.|++|+|+|++|+||+ ||+|++||+.++. ...........+|.++|++|+|+|||+ |++|+.|++|++||
T Consensus 50 H~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~---~~~~~~~~~~~~h~~~I~~v~~s~dg~~l~s~~~dg~i~iwd 125 (337)
T d1gxra_ 50 HGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPG---NKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTT---CCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCc---ccceeEEeeecCCCCcEEEEEEcCCCCEEEEeeccccccccc
Confidence 378999999999999999998 8999999998752 111122334578999999999999998 78999999999999
Q ss_pred CCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEE
Q 003217 269 WEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKV 347 (838)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~ 347 (838)
+......... .+..+ ...+..++.++++..+++++ +..|++||+.++++...
T Consensus 126 ~~~~~~~~~~-----------------~~~~~----------~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~~~~~~~ 178 (337)
T d1gxra_ 126 LAAPTPRIKA-----------------ELTSS----------APACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ 178 (337)
T ss_dssp CCCC--EEEE-----------------EEECS----------SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred cccccccccc-----------------ccccc----------cccccccccccccccccccccccccccccccccccccc
Confidence 8653221110 00111 34566777777888887766 57899999998876443
Q ss_pred EecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCceEEEEE
Q 003217 348 FNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRRTEALTT 427 (838)
Q Consensus 348 l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~v~ala~ 427 (838)
... +...+.++++
T Consensus 179 ~~~-------------------------------------------------------------------~~~~v~~l~~ 191 (337)
T d1gxra_ 179 FQG-------------------------------------------------------------------HTDGASCIDI 191 (337)
T ss_dssp ECC-------------------------------------------------------------------CSSCEEEEEE
T ss_pred ccc-------------------------------------------------------------------cccccccccc
Confidence 221 2233556778
Q ss_pred cCCCc-EEEEECCCeEEEEcC-CCCeeeEeecCCccEEEEEE--cCCEEEEEeeCCeEEEEeCCCcccccccccccCEEE
Q 003217 428 SIDGM-IWTGGANGLLLQWDP-NGNRLQDFQYLPFAVQCLCT--FGSQIWVGYMNGIVQVLDLEGNLLGGWVAHSSPVIK 503 (838)
Q Consensus 428 S~dg~-l~Sgs~DgtIrlWD~-~g~~l~tl~~H~~~V~sls~--dG~~LasGs~DgtIrlWD~~g~~i~~l~gH~~~V~s 503 (838)
++++. +++|+.|++|++||+ ++++++.+ .|...|+++++ ++++|++|+.|+.|++||++........+|.+.|.+
T Consensus 192 s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~-~~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~ 270 (337)
T d1gxra_ 192 SNDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLS 270 (337)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEE
T ss_pred cccccccccccccccccccccccceeeccc-ccccceEEEEEcccccccceeccccccccccccccccccccccccccce
Confidence 88876 789999999999999 68887776 47889999876 578999999999999999985555567899999999
Q ss_pred EEe--CCCEEEEEcCCCCeeeeecCCCCC
Q 003217 504 MAV--GAGYIFTLANHGGIRGWNVTSPGP 530 (838)
Q Consensus 504 la~--dg~~l~S~S~DgtIrlWdl~s~~~ 530 (838)
+++ ++++++|++.|++|++||+....+
T Consensus 271 v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~ 299 (337)
T d1gxra_ 271 LKFAYCGKWFVSTGKDNLLNAWRTPYGAS 299 (337)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCCE
Confidence 985 788999999999999999876443
No 14
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95 E-value=8.6e-26 Score=240.06 Aligned_cols=330 Identities=12% Similarity=0.145 Sum_probs=206.3
Q ss_pred CCceeecCCCCCccccCceeEEEEecCCEEEE-ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCe
Q 003217 116 PPSLEVKPHPLRETQIGCFLRTIVCTEEQLWA-GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSV 194 (838)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~-g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V 194 (838)
|...+++.|. ..-+.+++.+++.|++ +.|++|+|||+.+...... + ..| .++|
T Consensus 3 p~~~tL~GH~------~~vitc~~~~~~~l~tgs~Dg~i~vWd~~~~~~~~~-----------------l--~~H-~~~V 56 (355)
T d1nexb2 3 PQRTTLRGHM------TSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQ-----------------L--SGH-DGGV 56 (355)
T ss_dssp CEEEEEECCS------SSCEEEEEEETTEEEEEETTTEEEEEETTTTEEEEE-----------------E--ECC-SSCE
T ss_pred CCcEEECCcC------CCcEEEEEECCCEEEEEeCCCeEEEEECCCCcEEEE-----------------E--ECC-CCCE
Confidence 3445566663 1224456778888887 4689999999976543321 2 234 7899
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEec--cccccEEEEEEecCCC-EEEeeCCCcEEEEECCC
Q 003217 195 MCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQ--AHRGPVLSLCISSYGD-LWSGSEGGGIKIWPWEA 271 (838)
Q Consensus 195 ~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~--gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~~~ 271 (838)
.||+|+|+ ++|+||+.||+|++|+.... ....... .+...+..+.+++++. +++++.|++|++|++.+
T Consensus 57 ~~l~~s~~-~~l~s~s~D~~i~iw~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~ 127 (355)
T d1nexb2 57 WALKYAHG-GILVSGSTDRTVRVWDIKKG--------CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPK 127 (355)
T ss_dssp EEEEEETT-TEEEEEETTCCEEEEETTTT--------EEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC
T ss_pred EEEEEcCC-CEEEEEeccccccccccccc--------ccccccccccccccccccccccccceeeeecCCCcEEEEEccC
Confidence 99999985 68999999999999999886 3333333 3345566677888887 78999999999999976
Q ss_pred cceeeecCCCceeeeEEEEeeceeecccceeccce--eeeecCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEEE
Q 003217 272 IEKALSLKPEERHTAALIVERSYIDLRSHLSVNGF--SSILTSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKVF 348 (838)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~--~~~~s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~l 348 (838)
................. .......... .......+... ...+..++.+. +..|++||+.+++.+..+
T Consensus 128 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~ 197 (355)
T d1nexb2 128 ESSVPDHGEEHDYPLVF--------HTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYIL 197 (355)
T ss_dssp -----------CCCEEE--------SCTTTCTTEEEEEECCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred Cceeccccccceeccce--------eccccccceeeeeeecccccccc--ccccceeeeecccceeeeeecccccceeee
Confidence 43221111000000000 0000000000 00011222222 22345555544 678999999999887776
Q ss_pred ecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEec--c----CccccCCCce
Q 003217 349 NIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAA--K----GGFGDDNRRT 422 (838)
Q Consensus 349 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~--~----g~~~~~~~~v 422 (838)
..+...... ..+.+.+.....+..++..+++. . ..+..|...|
T Consensus 198 ~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~v 246 (355)
T d1nexb2 198 SGHTDRIYS-------------------------------TIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALV 246 (355)
T ss_dssp CCCSSCEEE-------------------------------EEEETTTTEEEEEETTSCEEEEETTTCCEEEEECCCSSCC
T ss_pred ecccccccc-------------------------------ccccccceeeecccccceEEeeeccccccccccccccccc
Confidence 544332111 12223333444555555444443 1 1344577788
Q ss_pred EEEEEcCCCcEEEEECCCeEEEEcC-CCCeeeEeecCCccEEEE---EEcCCEEEEEeeCCeEEEEeCC-Ccccc-cccc
Q 003217 423 EALTTSIDGMIWTGGANGLLLQWDP-NGNRLQDFQYLPFAVQCL---CTFGSQIWVGYMNGIVQVLDLE-GNLLG-GWVA 496 (838)
Q Consensus 423 ~ala~S~dg~l~Sgs~DgtIrlWD~-~g~~l~tl~~H~~~V~sl---s~dG~~LasGs~DgtIrlWD~~-g~~i~-~l~g 496 (838)
.++++++ ..|++|+.||+|++||+ ++.+ .+..|...+.++ .+++.+|++| .|++|+|||++ |+++. .+.+
T Consensus 247 ~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~~~~~~ 322 (355)
T d1nexb2 247 GLLRLSD-KFLVSAAADGSIRGWDANDYSR--KFSYHHTNLSAITTFYVSDNILVSG-SENQFNIYNLRSGKLVHANILK 322 (355)
T ss_dssp CEEEECS-SEEEEECTTSEEEEEETTTCCE--EEEEECTTCCCCCEEEECSSEEEEE-ETTEEEEEETTTCCBCCSCTTT
T ss_pred ccccccc-ceeeeeecccccccccccccce--ecccccCCceEEEEEcCCCCEEEEE-eCCEEEEEECCCCCEEEEEecC
Confidence 8888875 46899999999999999 4543 455566655543 4566666665 59999999987 78774 6789
Q ss_pred cccCEEEEEeCCCE-EEEEcCCCCeeeeec
Q 003217 497 HSSPVIKMAVGAGY-IFTLANHGGIRGWNV 525 (838)
Q Consensus 497 H~~~V~sla~dg~~-l~S~S~DgtIrlWdl 525 (838)
|.+.|++++++++. +++++.||++++|.+
T Consensus 323 ~~~~V~~v~~~~~~~~~~~s~dg~~~l~~~ 352 (355)
T d1nexb2 323 DADQIWSVNFKGKTLVAAVEKDGQSFLEIL 352 (355)
T ss_dssp TCSEEEEEEEETTEEEEEEESSSCEEEEEE
T ss_pred CCCCEEEEEEcCCeEEEEEECCCcEEEEEE
Confidence 99999999987765 557889999777654
No 15
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95 E-value=7.8e-27 Score=244.92 Aligned_cols=248 Identities=15% Similarity=0.148 Sum_probs=185.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCCEEEeeCCCcEEEEECC
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGDLWSGSEGGGIKIWPWE 270 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~L~SgS~DgtIrvWd~~ 270 (838)
..+|.||+|+| |+||+.||+|++||+.++ .++|++.|.++++++++.++|+|.|++||+|+..
T Consensus 13 ~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~-------------~~~h~~~V~~~~~~~~~~~~s~s~D~~v~~w~~~ 75 (287)
T d1pgua2 13 NKGITALTVNP----LISGSYDGRIMEWSSSSM-------------HQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGIT 75 (287)
T ss_dssp SSCEEEEETTT----TEEEETTSCEEETTTTEE-------------ECCCCSCEEEEECCSTTCCEEEETTTEEEETTEE
T ss_pred CCceEEEEECc----EEEEeCCCeEEEEECCCC-------------CCCCCCCEEEEEecCCCeEEEEeecccccccccc
Confidence 88999999987 999999999999998764 2589999999999998889999999999999974
Q ss_pred CcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeCCCcEEEEeccCccEEEEEec
Q 003217 271 AIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAGFLSFALWDARTRELLKVFNI 350 (838)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s~~tI~lWD~~tg~~l~~l~~ 350 (838)
..+ + ......++..+++..+.++.++.+.+|+..+++.++.+..
T Consensus 76 ~~~----~--------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (287)
T d1pgua2 76 KHE----F--------------------------------GSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL 119 (287)
T ss_dssp EEE----C--------------------------------SSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred ccc----c--------------------------------ccceeeeeeccCCceEEEeecccceeeeccceeeeeeccc
Confidence 311 0 1134455556666667777778899999999998887764
Q ss_pred CCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCC-cEEEEec-c-----C-ccccCCCce
Q 003217 351 DGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAAD-AVRRVAA-K-----G-GFGDDNRRT 422 (838)
Q Consensus 351 ~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~-~v~~v~~-~-----g-~~~~~~~~v 422 (838)
+.... .+ .+.+...+++..+ ...+++. . . ....+...+
T Consensus 120 ~~~~~---~~-------------------------------~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~v 165 (287)
T d1pgua2 120 NSPGS---AV-------------------------------SLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKP 165 (287)
T ss_dssp SSCEE---EE-------------------------------EECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCE
T ss_pred cceee---ee-------------------------------eccCcceeeeccccceeeeeeccccceeeeeeeccCCce
Confidence 43221 01 1111112222222 2222221 0 0 112355678
Q ss_pred EEEEEcCCCc-EEEEECCCeEEEEcC-CCCee-eEeecCCccEEEEEE------------cCCEEEEEeeCCeEEEEeCC
Q 003217 423 EALTTSIDGM-IWTGGANGLLLQWDP-NGNRL-QDFQYLPFAVQCLCT------------FGSQIWVGYMNGIVQVLDLE 487 (838)
Q Consensus 423 ~ala~S~dg~-l~Sgs~DgtIrlWD~-~g~~l-~tl~~H~~~V~sls~------------dG~~LasGs~DgtIrlWD~~ 487 (838)
.+++++|++. |++|+.||.|++||+ +++.+ ..+.+|..+|+++++ ++.+|++|+.|++|+|||++
T Consensus 166 ~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~ 245 (287)
T d1pgua2 166 SYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK 245 (287)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred eEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCeEEEEECC
Confidence 9999999997 889999999999999 56554 347789999999864 35699999999999999985
Q ss_pred --CcccccccccccCEEEEEe-CCCEEEEEcCCCCeeeeec
Q 003217 488 --GNLLGGWVAHSSPVIKMAV-GAGYIFTLANHGGIRGWNV 525 (838)
Q Consensus 488 --g~~i~~l~gH~~~V~sla~-dg~~l~S~S~DgtIrlWdl 525 (838)
++++..+.+|.+.|+++++ ++..++|+|.|++||+|++
T Consensus 246 ~~~~~~~~~~~h~~~V~~v~~~~~~~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 246 RPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNV 286 (287)
T ss_dssp CTTCCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEEEE
T ss_pred CCCeEEEEeCCCCCCeEEEEECCCCEEEEEECCCeEEEEEE
Confidence 4678889999999999985 3457999999999999996
No 16
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.95 E-value=1.2e-26 Score=249.38 Aligned_cols=236 Identities=14% Similarity=0.096 Sum_probs=188.2
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEEC
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPW 269 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~ 269 (838)
.+.+.+++++|+|+.|+.++ ++.|.+|++.++ .....+.+|++.|++++|+|+|+ |+||+.||+|+|||+
T Consensus 17 r~~~~~~a~~~~g~~l~~~~-~~~v~i~~~~~~--------~~~~~~~~H~~~v~~~~~sp~g~~latg~~dg~i~iwd~ 87 (311)
T d1nr0a1 17 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSL--------TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDT 87 (311)
T ss_dssp TTCCCCCEECTTSSEEEEEE-TTEEEEEETTCS--------SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEES
T ss_pred CCCeEEEEEcCCCCEEEEEe-CCEEEEEECCCC--------ceeEEEcCCCCCEEEEEEeCCCCeEeccccCceEeeeee
Confidence 44667899999999999985 667999999886 55677899999999999999998 789999999999999
Q ss_pred CCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeCC---CcEEEEeccCccEEE
Q 003217 270 EAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAGF---LSFALWDARTRELLK 346 (838)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s~---~tI~lWD~~tg~~l~ 346 (838)
.+........ +..| ...+.++++++++..++++++ ..+++||..+++.+.
T Consensus 88 ~~~~~~~~~~-----------------~~~~----------~~~v~~v~~s~d~~~l~~~~~~~~~~~~v~~~~~~~~~~ 140 (311)
T d1nr0a1 88 TQTTHILKTT-----------------IPVF----------SGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNG 140 (311)
T ss_dssp SSTTCCEEEE-----------------EECS----------SSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCB
T ss_pred eccccccccc-----------------cccc----------cCccccccccccccccccccccccccccccccccccccc
Confidence 7754322110 1111 456888889888888887764 358899988765422
Q ss_pred EEecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCceEEEE
Q 003217 347 VFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRRTEALT 426 (838)
Q Consensus 347 ~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~v~ala 426 (838)
+ +..|...|.+++
T Consensus 141 ~-------------------------------------------------------------------l~~h~~~v~~v~ 153 (311)
T d1nr0a1 141 N-------------------------------------------------------------------LTGQARAMNSVD 153 (311)
T ss_dssp C-------------------------------------------------------------------CCCCSSCEEEEE
T ss_pred c-------------------------------------------------------------------cccccccccccc
Confidence 2 123344566788
Q ss_pred EcCCCc--EEEEECCCeEEEEcC-CCCeeeEeecCCccEEEEEE--cCCEEEEEeeCCeEEEEeCC-Cccc-------cc
Q 003217 427 TSIDGM--IWTGGANGLLLQWDP-NGNRLQDFQYLPFAVQCLCT--FGSQIWVGYMNGIVQVLDLE-GNLL-------GG 493 (838)
Q Consensus 427 ~S~dg~--l~Sgs~DgtIrlWD~-~g~~l~tl~~H~~~V~sls~--dG~~LasGs~DgtIrlWD~~-g~~i-------~~ 493 (838)
|+|++. +++|+.|++|++||+ +++++..+..|...|+++.+ +|++|++|+.|+.|++||.. ++.+ ..
T Consensus 154 ~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~ 233 (311)
T d1nr0a1 154 FKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLK 233 (311)
T ss_dssp ECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSS
T ss_pred ccccceeeecccccccccccccccccccccccccccccccccccCccccccccccccccccccccccccccccccccccc
Confidence 888875 688999999999999 67899999999999999976 68899999999999999986 4332 23
Q ss_pred ccccccCEEEEEe--CCCEEEEEcCCCCeeeeecCCCC
Q 003217 494 WVAHSSPVIKMAV--GAGYIFTLANHGGIRGWNVTSPG 529 (838)
Q Consensus 494 l~gH~~~V~sla~--dg~~l~S~S~DgtIrlWdl~s~~ 529 (838)
..+|.+.|.++++ ++++|+|||.|++|++||+.+..
T Consensus 234 ~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~ 271 (311)
T d1nr0a1 234 NVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK 271 (311)
T ss_dssp SCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred cccccccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 4589999999985 68999999999999999987643
No 17
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.95 E-value=8.9e-26 Score=246.15 Aligned_cols=244 Identities=22% Similarity=0.305 Sum_probs=177.9
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCcc-----CCC-----CCcceeEEeccccccEEEEEEecCCC-EEEee
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLL-----DSD-----DGFGEVLSWQAHRGPVLSLCISSYGD-LWSGS 259 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~-----~~~-----~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS 259 (838)
.++|+||+|+|+|++|+||+ |++|++||+.++.. ... ..........+|...|++|+|+|+|+ |++|+
T Consensus 62 ~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s~~ 140 (388)
T d1erja_ 62 TSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGA 140 (388)
T ss_dssp SSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcceecc
Confidence 88999999999999999997 89999999988631 000 00000112346788899999999998 78999
Q ss_pred CCCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-CCcEEEEe
Q 003217 260 EGGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-FLSFALWD 338 (838)
Q Consensus 260 ~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-~~tI~lWD 338 (838)
.||+|++|+....+...... +| ...+.++...+.+..+.+++ ++.+++||
T Consensus 141 ~dg~v~i~~~~~~~~~~~~~-------------------~h----------~~~v~~~~~~~~~~~~~~~~~~~~i~~~d 191 (388)
T d1erja_ 141 EDRLIRIWDIENRKIVMILQ-------------------GH----------EQDIYSLDYFPSGDKLVSGSGDRTVRIWD 191 (388)
T ss_dssp TTSCEEEEETTTTEEEEEEC-------------------CC----------SSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cccccccccccccccccccc-------------------cc----------cccccccccccccccccccccceeeeeee
Confidence 99999999987644322211 11 44677777777777777665 57899999
Q ss_pred ccCccEEEEEecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccccC
Q 003217 339 ARTRELLKVFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDD 418 (838)
Q Consensus 339 ~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~ 418 (838)
..+.........+...
T Consensus 192 ~~~~~~~~~~~~~~~~---------------------------------------------------------------- 207 (388)
T d1erja_ 192 LRTGQCSLTLSIEDGV---------------------------------------------------------------- 207 (388)
T ss_dssp TTTTEEEEEEECSSCE----------------------------------------------------------------
T ss_pred cccccccccccccccc----------------------------------------------------------------
Confidence 9887764433221100
Q ss_pred CCceEEEEEcCCCc-EEEEECCCeEEEEcC-CCCeeeEe-------ecCCccEEEEEE--cCCEEEEEeeCCeEEEEeCC
Q 003217 419 NRRTEALTTSIDGM-IWTGGANGLLLQWDP-NGNRLQDF-------QYLPFAVQCLCT--FGSQIWVGYMNGIVQVLDLE 487 (838)
Q Consensus 419 ~~~v~ala~S~dg~-l~Sgs~DgtIrlWD~-~g~~l~tl-------~~H~~~V~sls~--dG~~LasGs~DgtIrlWD~~ 487 (838)
+....+++++. +++|+.|++|++||. ++..+..+ .+|...|+++.+ +|++|++|+.||+|++||+.
T Consensus 208 ---~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~ 284 (388)
T d1erja_ 208 ---TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQ 284 (388)
T ss_dssp ---EEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ---ccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEecc
Confidence 01122334554 789999999999999 67766554 368899999875 68899999999999999975
Q ss_pred -C------------cccccccccccCEEEEEe--CCCEEEEEcCCCCeeeeecCCCCCC
Q 003217 488 -G------------NLLGGWVAHSSPVIKMAV--GAGYIFTLANHGGIRGWNVTSPGPL 531 (838)
Q Consensus 488 -g------------~~i~~l~gH~~~V~sla~--dg~~l~S~S~DgtIrlWdl~s~~~~ 531 (838)
+ .+......|...|.++++ ++++|++|+.||+|++||+.+..++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~sg~~dg~i~vwd~~~~~~~ 343 (388)
T d1erja_ 285 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 343 (388)
T ss_dssp --------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEE
T ss_pred CCccccccccccccceeeecccccceEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE
Confidence 2 234566789999999985 7889999999999999998876544
No 18
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.94 E-value=1.8e-25 Score=241.03 Aligned_cols=242 Identities=15% Similarity=0.184 Sum_probs=176.9
Q ss_pred CCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEe--eCCCcEE
Q 003217 191 VSSVMCMVGDE--ASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSG--SEGGGIK 265 (838)
Q Consensus 191 ~~~V~~la~s~--dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~Sg--S~DgtIr 265 (838)
..+|.|++|+| +|.+|+||+.||+||+||+..+.............+..|.++|.+|+|+++|+ |+++ +.|+.++
T Consensus 63 ~~~v~~v~fsP~~~g~~lasgs~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~ 142 (325)
T d1pgua1 63 SSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGV 142 (325)
T ss_dssp TSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEE
T ss_pred CCCEEEEEEeeCCCCCEEEEEeCCCCEEEeeecCCcceeeeecccccccccccCcEEEEEECCCCCccceeeccccceEE
Confidence 56899999997 67899999999999999987642100000111233567999999999999998 5544 4578999
Q ss_pred EEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCC-EEEEeC-CCcEEEEeccCcc
Q 003217 266 IWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRA-KVWSAG-FLSFALWDARTRE 343 (838)
Q Consensus 266 vWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~-~V~s~s-~~tI~lWD~~tg~ 343 (838)
+|+++++.....+. +| ...+.++++.+.+. .+++++ ++.+++||..+++
T Consensus 143 ~~~~~~~~~~~~~~-------------------~h----------~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 193 (325)
T d1pgua1 143 FISWDSGNSLGEVS-------------------GH----------SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK 193 (325)
T ss_dssp EEETTTCCEEEECC-------------------SC----------SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE
T ss_pred EEeecccccceeee-------------------ec----------ccccccccccccccceEEEeecccccccccccccc
Confidence 99997754332222 12 34567777776654 455554 6889999988766
Q ss_pred EEEEEecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCceE
Q 003217 344 LLKVFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRRTE 423 (838)
Q Consensus 344 ~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~v~ 423 (838)
....+.. +..+...|.
T Consensus 194 ~~~~~~~----------------------------------------------------------------~~~~~~~v~ 209 (325)
T d1pgua1 194 FSASDRT----------------------------------------------------------------HHKQGSFVR 209 (325)
T ss_dssp EEEEECS----------------------------------------------------------------SSCTTCCEE
T ss_pred cceeccc----------------------------------------------------------------ccCCCCccE
Confidence 5332210 112344567
Q ss_pred EEEEcCCC-c-EEEEECCCeEEEEcC-CCCeeeEeecCCccEE----EEE-EcCCEEEEEeeCCeEEEEeCC-Ccccccc
Q 003217 424 ALTTSIDG-M-IWTGGANGLLLQWDP-NGNRLQDFQYLPFAVQ----CLC-TFGSQIWVGYMNGIVQVLDLE-GNLLGGW 494 (838)
Q Consensus 424 ala~S~dg-~-l~Sgs~DgtIrlWD~-~g~~l~tl~~H~~~V~----sls-~dG~~LasGs~DgtIrlWD~~-g~~i~~l 494 (838)
+++|+||+ . +++|+.|++|++||+ ++++++++.+|..+|. +++ ++|++|++|+.|++|+|||++ +++++.+
T Consensus 210 ~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~~~~~ 289 (325)
T d1pgua1 210 DVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKW 289 (325)
T ss_dssp EEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EeeeccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 88899873 4 789999999999999 7999999999887764 444 478999999999999999997 7888888
Q ss_pred cccccCE----EEEEe-CCCEEEEEcCCCCeeeeec
Q 003217 495 VAHSSPV----IKMAV-GAGYIFTLANHGGIRGWNV 525 (838)
Q Consensus 495 ~gH~~~V----~sla~-dg~~l~S~S~DgtIrlWdl 525 (838)
..|...+ .++.+ .+.+++|+|.||+|++||+
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~l~s~s~dg~i~vwdl 325 (325)
T d1pgua1 290 TLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325 (325)
T ss_dssp ECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEET
T ss_pred EecCCcccCeEEEEEECCCCEEEEEECCCEEEEEEC
Confidence 7776542 34444 3458999999999999995
No 19
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]}
Probab=99.94 E-value=4.9e-27 Score=247.91 Aligned_cols=230 Identities=17% Similarity=0.280 Sum_probs=180.2
Q ss_pred cceeeEEEEEEeCCCCCCcccccccccCC-CCCceEEEEEeecccCccchhhhhhhhhhccCCCCcchhhHHHHHhhhcC
Q 003217 550 ENLKILAGTWNVGQGRASQDALISWLGSA-ASDVGIVVVGLQEVEMGAGFLAMSAAKETVGLEGSAVGHWWLDMIGKILD 628 (838)
Q Consensus 550 ~~~~i~~~twNv~~~~~~~~~l~~wl~~~-~~~~di~vig~QE~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~ 628 (838)
..++|.+.|||||+.++. .++.+|+... ..+||||||||||+.+.... ....+.|.+.+.+.+.
T Consensus 3 ~~~~v~I~TwNv~~~~~~-~~~~~~l~~i~~~~pDI~vI~lQE~~~~~~~--------------~~~~~~~~~~~~~~~~ 67 (280)
T d2imqx1 3 AQLSVHTVSWNSGHERAP-TNLEELLGLNSGETPDVIAVAVQGFGFQTDK--------------PQQGPACVKNFQSLLT 67 (280)
T ss_dssp SEEEEEEEEEEEETCCCC-SCCHHHHTCTTSCCCSEEEEEEEESCTTTCT--------------TCCHHHHHHHHHHHHH
T ss_pred CceEEEEEEECCCCCcCC-cCHHHHhcccccCCCCEEEEEeEecCccccc--------------cchhHHHHHHHHHHhc
Confidence 467899999999988764 5677777643 35799999999999653211 1123567777777764
Q ss_pred CCCCEEEEeeeecccEEEEEEEecCCcCccCceeeceeecccCcccCCCceeEEEEEEcCeEEEEEeccccCCcchHHHH
Q 003217 629 DGSTFERVGSRQLAGLLIAVWVRKNLKDYVGDVDVAAVPCGFGRAIGNKGAVGLRVRVYDRIMCFVNCHFAAHLEAVNRR 708 (838)
Q Consensus 629 ~~~~y~~v~s~~l~g~~l~vf~r~~~~~~i~~v~~~~v~~G~~~~~gnKG~v~i~~~i~~~~~~Fv~~HLaa~~~~~~~R 708 (838)
...|..+...+++++.+++|+|.++..+. +....+.+|+++.++|||+|.+++.+.++.|+|+|+||.++..+..+|
T Consensus 68 -~~~y~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~i~~~~~~~in~hl~~~~~~~~~~ 144 (280)
T d2imqx1 68 -SKGYTKLKNTITETMGLTVYCLEKHLDQN--TLKNETIIVTVDDQKKSGGIVTSFTIYNKRFSFTTSRMSDEDVTSTNT 144 (280)
T ss_dssp -HTTEEEEEEEECSSEEEEEEEEGGGCCTT--TCCCEEEEEECSTTSCSEEEEEEEEETTEEEEEEEEECCTTCCCTTSS
T ss_pred -cCCeeEEEeeeeeceEEEEEEcccccccc--eecceeEeccCCcccCCcEEEEEEEECCEEEEeecccCCccchhHHHH
Confidence 35799999999999999999999998664 445567778888899999999999999999999999999887664444
Q ss_pred HHHHHHHHHhcCcCCCCCcccccccCCCceeeecccCCCCCCCcccCCCCcCcccEEEEeccceeeecCCChHHHHHHhh
Q 003217 709 NADFDHVYRTMTFCRPSNLCSAAAAGASSVVQMLRSTNPLSGLTVEGVPELSEADMVIFLGDFNYRLDGITYDEARDFIS 788 (838)
Q Consensus 709 n~d~~~I~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vf~~GDlNyRi~~~~~~~~~~~i~ 788 (838)
..+.... . ........++++||+||||+|... ......+.+.
T Consensus 145 ~~~~~~~--~-----------------------------------~~~~~~~~~~~vi~~GD~N~~~~~-~~~~~~~~~~ 186 (280)
T d2imqx1 145 KYAYDTR--L-----------------------------------DYSKKDDPSDFLFWIGDLNVRVET-NATHAKSLVD 186 (280)
T ss_dssp SSSCCGG--G-----------------------------------CTTSSSSCCSEEEEEEECSCCBCS-CHHHHHHHHH
T ss_pred HHHHHHh--h-----------------------------------hhhhhccCCCeeEEeccccccccc-ccHHHHhhhh
Confidence 3221100 0 001123467899999999999997 7778888888
Q ss_pred hcchHHHhhccchHHHHhcCCCcCCcccCCCCCCCCCcccCCCCCccC
Q 003217 789 QRCFDWLRERDQLRAEMEAGNVFQGMREADIKFPPTYKFEKHLAGLAG 836 (838)
Q Consensus 789 ~~~~~~Ll~~DQL~~~~~~~~~f~gf~E~~I~F~PTYK~~~~~~~~~~ 836 (838)
...++.++..|||.... .+.+|.+|+|++++|.||||+..+.+.|.+
T Consensus 187 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ft~~~~~~~~~~~~~~ 233 (280)
T d2imqx1 187 QNNIDGLMAFDQLKKAK-EQKLFDGWTEPQVTFKPTYKFKPNTDEYDL 233 (280)
T ss_dssp TTCHHHHHTTBTHHHHH-HTTSSTTCBCCCCCSCCCBCBCTTSSCBCT
T ss_pred cccchhhHHHHHHHHhh-hcchhhccccCCCCCCCcccccCccccCCC
Confidence 88999999999998876 468999999999999999999998887653
No 20
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.92 E-value=7.5e-23 Score=216.78 Aligned_cols=269 Identities=16% Similarity=0.157 Sum_probs=197.0
Q ss_pred ceeEEEEec--CCEEEE-ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEE
Q 003217 133 CFLRTIVCT--EEQLWA-GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSG 209 (838)
Q Consensus 133 ~~~~~l~~~--~~~l~~-g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSG 209 (838)
..+.+|+.+ +..|.+ +.|++|+|||+.+...... ...| ..+|.+++|+|++.++++|
T Consensus 56 ~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~~~~~~-------------------~~~~-~~~v~~v~~~~~~~~l~~~ 115 (340)
T d1tbga_ 56 AKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA-------------------IPLR-SSWVMTCAYAPSGNYVACG 115 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE-------------------EECS-CSCEEEEEECTTSSEEEEE
T ss_pred CCEEEEEECCCCCEEEEEECCCceeeeecccceeEEE-------------------Eecc-cccEEeeEeeccceeeeee
Confidence 357777765 335655 5699999999976543211 1234 7799999999999999999
Q ss_pred eCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCCEEEeeCCCcEEEEECCCcceeeecCCCceeeeEEE
Q 003217 210 HRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGDLWSGSEGGGIKIWPWEAIEKALSLKPEERHTAALI 289 (838)
Q Consensus 210 s~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~L~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~ 289 (838)
+.|++|++|+..... ........+.+|...+.......+..+..+..|.+.+.|............
T Consensus 116 ~~d~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 181 (340)
T d1tbga_ 116 GLDNICSIYNLKTRE----GNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT---------- 181 (340)
T ss_dssp ETTCCEEEEESSSSC----SCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEE----------
T ss_pred cccceeecccccccc----cccccceeccccccccccccccccccccccccccccccccccccccccccc----------
Confidence 999999999987642 223445678899998888888777778899999999999875532211110
Q ss_pred EeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEEEecCCceEEeeecccCccccc
Q 003217 290 VERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAM 368 (838)
Q Consensus 290 ~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~ 368 (838)
.....+......+....++++. +++|++||+++++++.++.+|...+..+.
T Consensus 182 -------------------~~~~~~~~~~~~~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~h~~~i~~v~--------- 233 (340)
T d1tbga_ 182 -------------------GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAIC--------- 233 (340)
T ss_dssp -------------------CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECCCSSCEEEEE---------
T ss_pred -------------------ccceeEeeeccccccceeEEeecCceEEEEECCCCcEEEEEeCCCCCeEEEE---------
Confidence 0123455555666666666655 67899999999999988876654433333
Q ss_pred ccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccC--------ccccCCCceEEEEEcCCCc-EEEEECC
Q 003217 369 EDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKG--------GFGDDNRRTEALTTSIDGM-IWTGGAN 439 (838)
Q Consensus 369 ~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g--------~~~~~~~~v~ala~S~dg~-l~Sgs~D 439 (838)
+.+++...++|..++..+++... ....+...+.++++++++. |++|+.|
T Consensus 234 ----------------------~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~g~~d 291 (340)
T d1tbga_ 234 ----------------------FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD 291 (340)
T ss_dssp ----------------------ECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECSSSCEEEEEETT
T ss_pred ----------------------ECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEEEECCCCCEEEEEECC
Confidence 33333444555556555554310 1223556788999999987 7899999
Q ss_pred CeEEEEcC-CCCeeeEeecCCccEEEEEE--cCCEEEEEeeCCeEEEEe
Q 003217 440 GLLLQWDP-NGNRLQDFQYLPFAVQCLCT--FGSQIWVGYMNGIVQVLD 485 (838)
Q Consensus 440 gtIrlWD~-~g~~l~tl~~H~~~V~sls~--dG~~LasGs~DgtIrlWD 485 (838)
|+|++||+ +++++.++.+|..+|+++++ +|++|++|+.||+|+|||
T Consensus 292 g~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~iWd 340 (340)
T d1tbga_ 292 FNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEEEeC
Confidence 99999999 79999999999999999976 688999999999999997
No 21
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.92 E-value=4.1e-23 Score=217.91 Aligned_cols=267 Identities=16% Similarity=0.247 Sum_probs=176.2
Q ss_pred ceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeee
Q 003217 232 GEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSIL 310 (838)
Q Consensus 232 ~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~ 310 (838)
+....|+||+++|.+ +++++|+ |+|||.||+|||||+.+++...++. +|
T Consensus 7 ~~~~~l~GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~~~~~~~~-------------------~h---------- 56 (342)
T d2ovrb2 7 KSPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLV-------------------GH---------- 56 (342)
T ss_dssp CCCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECC-------------------CC----------
T ss_pred CcCEEECCcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCCCEEEEEe-------------------CC----------
Confidence 667789999999866 4677787 8999999999999998765433322 22
Q ss_pred cCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEEEecCCceEEeeecccCcccccccceeeEEEecCCCCcce---
Q 003217 311 TSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQ--- 386 (838)
Q Consensus 311 s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~--- 386 (838)
...|.++.+.+ ..+++++ |+++++|+................................+..+.++... ..+..
T Consensus 57 ~~~V~~v~~~~--~~l~s~s~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~ 133 (342)
T d2ovrb2 57 TGGVWSSQMRD--NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE-TGQCLHVL 133 (342)
T ss_dssp SSCEEEEEEET--TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESS-SCCEEEEE
T ss_pred CCCEEEEEeCC--CccccceecccccccccccccceecccccceeEeeeecccccccccccceeEEEeecc-cccceeee
Confidence 34566677654 3666665 68999999988776554433322111111111000000001111111111 00000
Q ss_pred -----eeeeEeecCcceeeecCCcEEEEecc------CccccCCCceEEEEEcCCCc-EEEEECCCeEEEEcC-CCCeee
Q 003217 387 -----SSFGFFQRSRNAIMGAADAVRRVAAK------GGFGDDNRRTEALTTSIDGM-IWTGGANGLLLQWDP-NGNRLQ 453 (838)
Q Consensus 387 -----~s~~~~~~~~~~~~g~~~~v~~v~~~------g~~~~~~~~v~ala~S~dg~-l~Sgs~DgtIrlWD~-~g~~l~ 453 (838)
............+.+..++..+++.. ..+..+...+..+.+ ++. +++|+.||+|++||+ .+++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~~~~~ 211 (342)
T d2ovrb2 134 MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIH 211 (342)
T ss_dssp ECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred ecccccceeeccccceeeeecCCCeEEEeecccceeeEEEcCcccccccccC--CCCEEEEEeCCCeEEEeecccceeee
Confidence 01112223345566666666665541 123345555544444 444 899999999999999 789999
Q ss_pred EeecCCccEEEEEEcCCEEEEEeeCCeEEEEeCC-Ccc---cccccccccCEEEEEeCCCEEEEEcCCCCeeeeecCCCC
Q 003217 454 DFQYLPFAVQCLCTFGSQIWVGYMNGIVQVLDLE-GNL---LGGWVAHSSPVIKMAVGAGYIFTLANHGGIRGWNVTSPG 529 (838)
Q Consensus 454 tl~~H~~~V~sls~dG~~LasGs~DgtIrlWD~~-g~~---i~~l~gH~~~V~sla~dg~~l~S~S~DgtIrlWdl~s~~ 529 (838)
++.+|...|.++++++++|++|+.|++|++||.. .+. +.....|...+.++.++++++++++.||+||+||+.+..
T Consensus 212 ~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s~Dg~i~iwd~~tg~ 291 (342)
T d2ovrb2 212 TLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGE 291 (342)
T ss_dssp EECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTTCC
T ss_pred EecccccceeEEecCCCEEEEEcCCCEEEEEecccccccccccccceeeeceeecccCCCeeEEEcCCCEEEEEECCCCC
Confidence 9999999999999999999999999999999986 444 344456788999999999999999999999999998765
Q ss_pred CCch
Q 003217 530 PLDS 533 (838)
Q Consensus 530 ~~d~ 533 (838)
.+..
T Consensus 292 ~i~~ 295 (342)
T d2ovrb2 292 FIRN 295 (342)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5433
No 22
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.92 E-value=3.9e-23 Score=228.15 Aligned_cols=277 Identities=13% Similarity=0.121 Sum_probs=178.7
Q ss_pred eeEEEEecCCEEEE-ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCe------EEEEEcC-CCCE
Q 003217 134 FLRTIVCTEEQLWA-GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSV------MCMVGDE-ASGV 205 (838)
Q Consensus 134 ~~~~l~~~~~~l~~-g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V------~~la~s~-dg~~ 205 (838)
.+.+++..++.+.+ +.|++|||||..+...... .........+ ...+ .++..+. ++.+
T Consensus 16 ~I~~v~~~~~~l~S~S~D~~iriWd~~~~~~~~~-------------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 81 (393)
T d1sq9a_ 16 DIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENP-------------KDKSYSHFVH-KSGLHHVDVLQAIERDAFELCL 81 (393)
T ss_dssp CEEEEEECSSEEEEEETTSEEEEEESBCCTTCCG-------------GGGEEEEECC-TTCEEEEEEEEEEETTTEEEEE
T ss_pred ccEEEEEeCCEEEEEECCCeEEEEECCCCCCCcc-------------cceeEeeeec-cCCceEeeeEeeeccCCCCCcE
Confidence 46677777777776 6799999999765332110 0000001011 1121 2222221 2357
Q ss_pred EEEEeCCCcEEEEECCCCccCCCCCccee------EEeccccccEEEEEEecCC-----C-EEEeeCCCcEEEEECCCcc
Q 003217 206 VWSGHRDGRIMCWKMNARLLDSDDGFGEV------LSWQAHRGPVLSLCISSYG-----D-LWSGSEGGGIKIWPWEAIE 273 (838)
Q Consensus 206 LaSGs~DGtIrvWd~~~g~~~~~~~~~~~------~~l~gH~~~V~slafs~dG-----~-L~SgS~DgtIrvWd~~~~~ 273 (838)
+++++.||+|++|++..... ..... .....|...+.++++.+++ . +++++.||+|++|++....
T Consensus 82 ~~s~~~dg~v~~w~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~vw~~~~~~ 157 (393)
T d1sq9a_ 82 VATTSFSGDLLFYRITREDE----TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFA 157 (393)
T ss_dssp EEEEETTSCEEEEEEEECTT----TCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSS
T ss_pred EEEEeCCCcEEEEEccCCCc----eeeeeccccceeeeccCCCceEEEEEecCCCcccccEEEEEcCCCcEEEEEeecCC
Confidence 88999999999999765420 00000 1113456778888888764 2 6899999999999985422
Q ss_pred ee-eecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEEEecC
Q 003217 274 KA-LSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKVFNID 351 (838)
Q Consensus 274 ~~-~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~l~~~ 351 (838)
.. ............+ ...... .......+.++++++++ .+++++ |++|+|||+.+++++..+...
T Consensus 158 ~~~~~~~~~~~~~~~~--~~~~~~----------~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~~~~~~ 224 (393)
T d1sq9a_ 158 DESNSLTLNWSPTLEL--QGTVES----------PMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQ 224 (393)
T ss_dssp SHHHHTTTCCCCEEEE--EEEECC----------SSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred cccceeeeeeccceec--ccceec----------ccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeecccccccccccc
Confidence 11 1111100000000 000000 00112346677887765 777776 689999999999887655321
Q ss_pred CceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCceEEEEEcCCC
Q 003217 352 GQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRRTEALTTSIDG 431 (838)
Q Consensus 352 ~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~v~ala~S~dg 431 (838)
. .+..|...|.+|+|+|||
T Consensus 225 ~-------------------------------------------------------------~l~~h~~~V~~l~~spdg 243 (393)
T d1sq9a_ 225 H-------------------------------------------------------------SMINNSNSIRSVKFSPQG 243 (393)
T ss_dssp C----------------------------------------------------------------CCCCCEEEEEECSST
T ss_pred c-------------------------------------------------------------ccccccceEEEccccccc
Confidence 0 123466678899999999
Q ss_pred c-EEEEECCCe---EEEEcC-CCCeeeEee-------------cCCccEEEEEE--cCCEEEEEeeCCeEEEEeCC-Ccc
Q 003217 432 M-IWTGGANGL---LLQWDP-NGNRLQDFQ-------------YLPFAVQCLCT--FGSQIWVGYMNGIVQVLDLE-GNL 490 (838)
Q Consensus 432 ~-l~Sgs~Dgt---IrlWD~-~g~~l~tl~-------------~H~~~V~sls~--dG~~LasGs~DgtIrlWD~~-g~~ 490 (838)
+ |++|+.|++ |++||+ +|++++++. +|.+.|++|++ +|++|++|+.|++|+|||++ |++
T Consensus 244 ~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~ 323 (393)
T d1sq9a_ 244 SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKER 323 (393)
T ss_dssp TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE
T ss_pred ceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCE
Confidence 8 789998874 999999 788888774 79999999976 78999999999999999987 899
Q ss_pred cccccccccCEE
Q 003217 491 LGGWVAHSSPVI 502 (838)
Q Consensus 491 i~~l~gH~~~V~ 502 (838)
+.++.||.+.|.
T Consensus 324 ~~~l~gH~~~v~ 335 (393)
T d1sq9a_ 324 ITTLNMHCDDIE 335 (393)
T ss_dssp EEEEECCGGGCS
T ss_pred EEEECCcCCccc
Confidence 999999998875
No 23
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.91 E-value=1.7e-23 Score=219.96 Aligned_cols=277 Identities=10% Similarity=0.028 Sum_probs=177.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC--EEEeeCCCcEEEEE
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD--LWSGSEGGGIKIWP 268 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~--L~SgS~DgtIrvWd 268 (838)
...|.+|+|+|++++|+|||.||+||+||++++. .........+|.++|++++|+|++. |+||+.|++|++|+
T Consensus 11 ~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~-----~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~w~ 85 (342)
T d1yfqa_ 11 KDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA-----KNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTT-----TEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEEC
T ss_pred CCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCC-----cceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceeeee
Confidence 6789999999999999999999999999997752 1122334458999999999999764 78999999999999
Q ss_pred CCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEE-eCCCcEEEEeccCccEEEE
Q 003217 269 WEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWS-AGFLSFALWDARTRELLKV 347 (838)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s-~s~~tI~lWD~~tg~~l~~ 347 (838)
+............. ..........++...+++ +.++++++||++++.....
T Consensus 86 ~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~ 137 (342)
T d1yfqa_ 86 LIGSPSFQALTNNE----------------------------ANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVI 137 (342)
T ss_dssp SSSSSSEEECBSCC----------------------------CCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCE
T ss_pred cccccccccccccc----------------------------cccccccccccccccccccccccccceeecccccccee
Confidence 97644322221100 001111222223344444 4478999999976543222
Q ss_pred EecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccC--c-------cccC
Q 003217 348 FNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKG--G-------FGDD 418 (838)
Q Consensus 348 l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g--~-------~~~~ 418 (838)
+...... .. . ........+.......+.+..++..+++... . ....
T Consensus 138 ~~~~~~~------~~---~----------------~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~ 192 (342)
T d1yfqa_ 138 AVKNLNS------NN---T----------------KVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGL 192 (342)
T ss_dssp EEEESCS------SS---S----------------SSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSC
T ss_pred eeccccc------cc---c----------------cceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeeccc
Confidence 2110000 00 0 0000011122223344556666655555311 0 0112
Q ss_pred CCceEEEEE-cCCCc-EEEEECCCeEEEEcCCC-Ce------e---------eEeecCCccEEEEEE--cCCEEEEEeeC
Q 003217 419 NRRTEALTT-SIDGM-IWTGGANGLLLQWDPNG-NR------L---------QDFQYLPFAVQCLCT--FGSQIWVGYMN 478 (838)
Q Consensus 419 ~~~v~ala~-S~dg~-l~Sgs~DgtIrlWD~~g-~~------l---------~tl~~H~~~V~sls~--dG~~LasGs~D 478 (838)
...+.+... +.++. +++++.||.+.+|+... .. . ....+|...|++|++ ++++|++|+.|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~~~lasg~~D 272 (342)
T d1yfqa_ 193 KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSD 272 (342)
T ss_dssp SSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETT
T ss_pred ccceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCccEEEEECCC
Confidence 223444443 44444 78999999999998732 11 1 112357778998875 68899999999
Q ss_pred CeEEEEeCC-Cccccccc-ccccCEEEEEeCCCEEEEEcCCCCeeeeec
Q 003217 479 GIVQVLDLE-GNLLGGWV-AHSSPVIKMAVGAGYIFTLANHGGIRGWNV 525 (838)
Q Consensus 479 gtIrlWD~~-g~~i~~l~-gH~~~V~sla~dg~~l~S~S~DgtIrlWdl 525 (838)
|+|+|||++ ++.+..+. .|...|.+++++|+.+++++.|+++++|..
T Consensus 273 g~v~vWD~~~~~~l~~~~~~~~~~~~~~s~~~~~l~~a~sdd~~~~~~~ 321 (342)
T d1yfqa_ 273 GIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp SCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEEECTHHHHCSS
T ss_pred CEEEEEECCCCcEEEEecCCCCCEEEEEEeCCCEEEEEEcCCcEEEeee
Confidence 999999997 66777775 567778899999999999999999999974
No 24
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=99.91 E-value=3.8e-23 Score=217.52 Aligned_cols=243 Identities=12% Similarity=0.074 Sum_probs=168.7
Q ss_pred ceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeee
Q 003217 232 GEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSIL 310 (838)
Q Consensus 232 ~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~ 310 (838)
.....++||+++|++|+|+|||+ |+|||.||+||+||+++++....+.. .|
T Consensus 3 ~~~~~~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~~~~~~~~------------------~h---------- 54 (299)
T d1nr0a2 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPD------------------VH---------- 54 (299)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSC------------------SC----------
T ss_pred ccceEcCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcC------------------CC----------
Confidence 34567899999999999999998 78999999999999987543322211 11
Q ss_pred cCCeEEEEEcCCCCEEEEeCCCcEEEEeccCccEEEEEecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeee
Q 003217 311 TSDIKNLLSDHSRAKVWSAGFLSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFG 390 (838)
Q Consensus 311 s~~v~~las~~~~~~V~s~s~~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~ 390 (838)
...+.++++.+++..+.++.++++++|+....... . ...... . .......+.
T Consensus 55 ~~~v~~v~~~~~g~~~~~~~d~~v~~~~~~~~~~~-~---~~~~~~----------------------~--~~~~~~~~~ 106 (299)
T d1nr0a2 55 ATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVD-S---SKAVAN----------------------K--LSSQPLGLA 106 (299)
T ss_dssp SSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSC-T---TSCCEE----------------------E--CSSCEEEEE
T ss_pred CCcEEEEEeeccceeecccceeeEEEeccCCcccc-c---cccccc----------------------c--ccccccccc
Confidence 34577888888887777778899999998653320 0 000000 0 000011223
Q ss_pred EeecCcceeeecCCcEEEEeccC-ccccCCCceEEEEEcCCCc-EEEEECCCeEEEEcCC-CCeee-EeecCCccEEEEE
Q 003217 391 FFQRSRNAIMGAADAVRRVAAKG-GFGDDNRRTEALTTSIDGM-IWTGGANGLLLQWDPN-GNRLQ-DFQYLPFAVQCLC 466 (838)
Q Consensus 391 ~~~~~~~~~~g~~~~v~~v~~~g-~~~~~~~~v~ala~S~dg~-l~Sgs~DgtIrlWD~~-g~~l~-tl~~H~~~V~sls 466 (838)
+.+++..+..+..+.+..+.... .-......+.+++++|++. +++|+.|+.|++||++ +++.. ....|..+|++++
T Consensus 107 ~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~ 186 (299)
T d1nr0a2 107 VSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVA 186 (299)
T ss_dssp ECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 33333333344333333332210 0112334567889999987 7899999999999994 54433 3447899999997
Q ss_pred E--cCCEEEEEeeCCeEEEEeCC-Cc---ccccccccccCEEEEEe--CCCEEEEEcCCCCeeeeecCCCCC
Q 003217 467 T--FGSQIWVGYMNGIVQVLDLE-GN---LLGGWVAHSSPVIKMAV--GAGYIFTLANHGGIRGWNVTSPGP 530 (838)
Q Consensus 467 ~--dG~~LasGs~DgtIrlWD~~-g~---~i~~l~gH~~~V~sla~--dg~~l~S~S~DgtIrlWdl~s~~~ 530 (838)
+ ++++|++|+.|+.|++||+. +. ....+.+|...|.++++ +++++++++.|++|++||+..+..
T Consensus 187 ~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~ 258 (299)
T d1nr0a2 187 FSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD 258 (299)
T ss_dssp ECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTS
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccceEEEcCCCEEEEEECCCCCc
Confidence 6 68899999999999999986 43 35678899999999984 788999999999999999876543
No 25
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.90 E-value=1.2e-22 Score=222.32 Aligned_cols=291 Identities=12% Similarity=0.049 Sum_probs=192.9
Q ss_pred eEEEEec--CCEEEE-ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEeC
Q 003217 135 LRTIVCT--EEQLWA-GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGHR 211 (838)
Q Consensus 135 ~~~l~~~--~~~l~~-g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs~ 211 (838)
+.+++.+ ++.|.+ +.|+.|+|||+.+.... + ...++ .| .++|.||+|+|++++|+||+.
T Consensus 10 It~~~~s~dg~~la~~~~~~~i~iw~~~~~~~~-~--------------~~~l~--gH-~~~V~~l~fsp~~~~l~s~s~ 71 (371)
T d1k8kc_ 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWV-Q--------------VHELK--EH-NGQVTGVDWAPDSNRIVTCGT 71 (371)
T ss_dssp CCEEEECTTSSEEEEECSSSEEEEEEEETTEEE-E--------------EEEEE--CC-SSCEEEEEEETTTTEEEEEET
T ss_pred eEEEEECCCCCEEEEEeCCCEEEEEECCCCCEE-E--------------EEEec--CC-CCCEEEEEECCCCCEEEEEEC
Confidence 5566654 445555 45789999998643211 0 01122 23 789999999999999999999
Q ss_pred CCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEECCCcceeeecCCCceeeeEEEE
Q 003217 212 DGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPWEAIEKALSLKPEERHTAALIV 290 (838)
Q Consensus 212 DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~ 290 (838)
|++|++||+.++. .+....+.+|...|++++|+|+++ |++|+.|++|++|+++..........
T Consensus 72 D~~i~vWd~~~~~------~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~---------- 135 (371)
T d1k8kc_ 72 DRNAYVWTLKGRT------WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH---------- 135 (371)
T ss_dssp TSCEEEEEEETTE------EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEE----------
T ss_pred CCeEEEEeecccc------cccccccccccccccccccccccccceeecccCcceeeeeecccccccccc----------
Confidence 9999999998752 234566789999999999999998 88999999999999865332111000
Q ss_pred eeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEEEecCCceEEeeecccCcccccc
Q 003217 291 ERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAME 369 (838)
Q Consensus 291 ~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~ 369 (838)
..+.+ ...+.++++++++..+++++ |++|++||+..+.......... .......
T Consensus 136 -----~~~~~----------~~~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~---------~~~~~~~- 190 (371)
T d1k8kc_ 136 -----IKKPI----------RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTP---------WGSKMPF- 190 (371)
T ss_dssp -----ECTTC----------CSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBT---------TBSCCCT-
T ss_pred -----ccccc----------ccccccccccccccceeccccCcEEEEEeeccCcccccccccc---------ccccccc-
Confidence 00111 34678888888888888876 6899999987654311110000 0000000
Q ss_pred cceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEecc------CccccCCCceEEEEEcCCCcEEEEECCCeEE
Q 003217 370 DEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAK------GGFGDDNRRTEALTTSIDGMIWTGGANGLLL 443 (838)
Q Consensus 370 ~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~------g~~~~~~~~v~ala~S~dg~l~Sgs~DgtIr 443 (838)
.. .+.........+..+.|.+++..++++..++..++|.. ..+..|...|.+++|++|+.+++++.|+.++
T Consensus 191 ~~---~~~~~~~~~~~v~~~~~s~~g~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~s~~fs~d~~~la~g~d~~~~ 267 (371)
T d1k8kc_ 191 GE---LMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPV 267 (371)
T ss_dssp TC---EEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEETTSSCE
T ss_pred ee---eeeeccCccCcEEEEEeecccccccccccCCcceEEeeecccceeeeecccccceeeeecCCCCEEEEEcCCceE
Confidence 00 00111122333456778888777888888888877751 2344577789999999999987777788777
Q ss_pred EEcC-C--CCeeeE---------------------------------------eecCCccEEEEEE--cC----CEEEEE
Q 003217 444 QWDP-N--GNRLQD---------------------------------------FQYLPFAVQCLCT--FG----SQIWVG 475 (838)
Q Consensus 444 lWD~-~--g~~l~t---------------------------------------l~~H~~~V~sls~--dG----~~LasG 475 (838)
+|.. . +.+... ...|.+.|+++++ .+ ..+++|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~H~~~I~~i~~~~~~~~~~~~~~T~ 347 (371)
T d1k8kc_ 268 LFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTT 347 (371)
T ss_dssp EEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEE
T ss_pred EEEeeCCCceEEEeeeecCccccccccccceeeEecccceeEEeccccccceecccccCCEEEEEEeCCCCcceEEEEEE
Confidence 7654 1 111000 0138889999865 22 379999
Q ss_pred eeCCeEEEEeCC
Q 003217 476 YMNGIVQVLDLE 487 (838)
Q Consensus 476 s~DgtIrlWD~~ 487 (838)
+.||+|+|||++
T Consensus 348 g~Dg~v~iW~~~ 359 (371)
T d1k8kc_ 348 GMDGGMSIWDVR 359 (371)
T ss_dssp ETTSEEEEEEHH
T ss_pred cCCCeEEEEeCC
Confidence 999999999975
No 26
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.90 E-value=1.3e-22 Score=223.93 Aligned_cols=269 Identities=14% Similarity=0.125 Sum_probs=166.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEe----cCC---C-EEEeeCCC
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCIS----SYG---D-LWSGSEGG 262 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs----~dG---~-L~SgS~Dg 262 (838)
.+.|+||++++ ++|+|||.|++||+||..+.. ...+.........|...+..+... .++ . +++++.||
T Consensus 14 ~~~I~~v~~~~--~~l~S~S~D~~iriWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~dg 89 (393)
T d1sq9a_ 14 DADIFSVSACN--SFTVSCSGDGYLKVWDNKLLD--NENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSG 89 (393)
T ss_dssp SSCEEEEEECS--SEEEEEETTSEEEEEESBCCT--TCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTS
T ss_pred cCccEEEEEeC--CEEEEEECCCeEEEEECCCCC--CCcccceeEeeeeccCCceEeeeEeeeccCCCCCcEEEEEeCCC
Confidence 78999999874 799999999999999987642 112223344445666655444321 122 2 56999999
Q ss_pred cEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCC-----CCEEEE-eCCCcEEE
Q 003217 263 GIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHS-----RAKVWS-AGFLSFAL 336 (838)
Q Consensus 263 tIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~-----~~~V~s-~s~~tI~l 336 (838)
+|++|++...........+. .. .+.... ....+..++.... +..+.+ +.++++++
T Consensus 90 ~v~~w~~~~~~~~~~~~~~~---------~~--~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~v 150 (393)
T d1sq9a_ 90 DLLFYRITREDETKKVIFEK---------LD--LLDSDM--------KKHSFWALKWGASNDRLLSHRLVATDVKGTTYI 150 (393)
T ss_dssp CEEEEEEEECTTTCCEEEEE---------EC--CSCTTG--------GGSCEEEEEEECCC----CEEEEEEETTSCEEE
T ss_pred cEEEEEccCCCceeeeeccc---------cc--eeeecc--------CCCceEEEEEecCCCcccccEEEEEcCCCcEEE
Confidence 99999975432211110000 00 000000 0112222222221 223333 44789999
Q ss_pred EeccCccEEEEEecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccc
Q 003217 337 WDARTRELLKVFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFG 416 (838)
Q Consensus 337 WD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~ 416 (838)
||+....... . ...... ... .... + ......
T Consensus 151 w~~~~~~~~~-------~----~~~~~~------------------~~~---~~~~--------~---------~~~~~~ 181 (393)
T d1sq9a_ 151 WKFHPFADES-------N----SLTLNW------------------SPT---LELQ--------G---------TVESPM 181 (393)
T ss_dssp EEEESSSSHH-------H----HTTTCC------------------CCE---EEEE--------E---------EECCSS
T ss_pred EEeecCCccc-------c----eeeeee------------------ccc---eecc--------c---------ceeccc
Confidence 9975422100 0 000000 000 0000 0 000111
Q ss_pred cCCCceEEEEEcCCCcEEEEECCCeEEEEcC-CCCeeeE------eecCCccEEEEEE--cCCEEEEEeeCC---eEEEE
Q 003217 417 DDNRRTEALTTSIDGMIWTGGANGLLLQWDP-NGNRLQD------FQYLPFAVQCLCT--FGSQIWVGYMNG---IVQVL 484 (838)
Q Consensus 417 ~~~~~v~ala~S~dg~l~Sgs~DgtIrlWD~-~g~~l~t------l~~H~~~V~sls~--dG~~LasGs~Dg---tIrlW 484 (838)
.+...+.+++++||+.+++|+.|++|++||+ +++++.+ +.+|..+|++|++ +|++|++|+.|+ .|+||
T Consensus 182 ~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lw 261 (393)
T d1sq9a_ 182 TPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY 261 (393)
T ss_dssp SSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEE
T ss_pred CCCCcEEEEEECCCCEEEEEeCCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeec
Confidence 2334467899999999999999999999999 6776654 4579999999875 799999999987 59999
Q ss_pred eCC-Ccccccc-------------cccccCEEEEEe--CCCEEEEEcCCCCeeeeecCCCCCC
Q 003217 485 DLE-GNLLGGW-------------VAHSSPVIKMAV--GAGYIFTLANHGGIRGWNVTSPGPL 531 (838)
Q Consensus 485 D~~-g~~i~~l-------------~gH~~~V~sla~--dg~~l~S~S~DgtIrlWdl~s~~~~ 531 (838)
|++ ++++.++ .||++.|++|++ |+++|+|+|.|++||+||+.+..++
T Consensus 262 d~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~ 324 (393)
T d1sq9a_ 262 ETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERI 324 (393)
T ss_dssp ETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEEEEEECCCCCEE
Confidence 987 6555544 589999999985 7889999999999999999876544
No 27
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.90 E-value=1.4e-22 Score=218.02 Aligned_cols=246 Identities=15% Similarity=0.143 Sum_probs=178.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCC-cEEEEECCCCccCCCCCcceeEEeccc-cccEEEEEEec--CCC-EEEeeCCCcEE
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDG-RIMCWKMNARLLDSDDGFGEVLSWQAH-RGPVLSLCISS--YGD-LWSGSEGGGIK 265 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DG-tIrvWd~~~g~~~~~~~~~~~~~l~gH-~~~V~slafs~--dG~-L~SgS~DgtIr 265 (838)
.+.+.+++|+|+|..|+.++.+. .|+.|+.... .......+.|| ..+|++|+|+| +|+ |+||+.||+||
T Consensus 17 ~~~~t~l~~~~~~~~la~~~~~~~~i~~~~~~~~------~~~~~~~~~gh~~~~v~~v~fsP~~~g~~lasgs~Dg~i~ 90 (325)
T d1pgua1 17 RNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDS------KVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVI 90 (325)
T ss_dssp TTCCCCCEEETTTTEEEEEETTEEEEEECCSSCC------SSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEEeCCCC------CccceEEEeCCCCCCEEEEEEeeCCCCCEEEEEeCCCCEE
Confidence 44678899999999999987665 3677775442 22456778888 57899999998 455 68999999999
Q ss_pred EEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC---CCcEEEEeccCc
Q 003217 266 IWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG---FLSFALWDARTR 342 (838)
Q Consensus 266 vWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s---~~tI~lWD~~tg 342 (838)
|||+........... .. ..........+..++.++++..+++++ +..+++|+..++
T Consensus 91 iWd~~~~~~~~~~~~---~~------------------~~~~~~~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~ 149 (325)
T d1pgua1 91 VWGWTFDKESNSVEV---NV------------------KSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG 149 (325)
T ss_dssp EEEEEEEGGGTEEEE---EE------------------EEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTC
T ss_pred EeeecCCcceeeeec---cc------------------ccccccccCcEEEEEECCCCCccceeeccccceEEEEeeccc
Confidence 999865332111100 00 000011245678888888888777654 346889998888
Q ss_pred cEEEEEecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCce
Q 003217 343 ELLKVFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRRT 422 (838)
Q Consensus 343 ~~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~v 422 (838)
+++..+.+ |...|
T Consensus 150 ~~~~~~~~-------------------------------------------------------------------h~~~v 162 (325)
T d1pgua1 150 NSLGEVSG-------------------------------------------------------------------HSQRI 162 (325)
T ss_dssp CEEEECCS-------------------------------------------------------------------CSSCE
T ss_pred ccceeeee-------------------------------------------------------------------ccccc
Confidence 77655432 22334
Q ss_pred EEEEEcCCCc--EEEEECCCeEEEEcC-CCCeeeE---eecCCccEEEEEE--c-CCEEEEEeeCCeEEEEeCC-Ccccc
Q 003217 423 EALTTSIDGM--IWTGGANGLLLQWDP-NGNRLQD---FQYLPFAVQCLCT--F-GSQIWVGYMNGIVQVLDLE-GNLLG 492 (838)
Q Consensus 423 ~ala~S~dg~--l~Sgs~DgtIrlWD~-~g~~l~t---l~~H~~~V~sls~--d-G~~LasGs~DgtIrlWD~~-g~~i~ 492 (838)
.++++++++. +++++.|++|++||. .++.... +..|...|.++++ + +.+|++|+.|+.|++||++ ++++.
T Consensus 163 ~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~ 242 (325)
T d1pgua1 163 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLK 242 (325)
T ss_dssp EEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEE
T ss_pred ccccccccccceEEEeecccccccccccccccceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccc
Confidence 5667777764 678999999999998 5554444 4467888999976 3 5799999999999999987 78889
Q ss_pred cccccccCE----EEEE-eCCCEEEEEcCCCCeeeeecCCCCC
Q 003217 493 GWVAHSSPV----IKMA-VGAGYIFTLANHGGIRGWNVTSPGP 530 (838)
Q Consensus 493 ~l~gH~~~V----~sla-~dg~~l~S~S~DgtIrlWdl~s~~~ 530 (838)
++.+|...| .++. +++++++|++.|++|++||+.+..+
T Consensus 243 ~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~~i~iwd~~~~~~ 285 (325)
T d1pgua1 243 YIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKC 285 (325)
T ss_dssp ECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEE
T ss_pred cccccccccccceeeeeccCCCEEEEEeCCCeEEEEECCCCCE
Confidence 999888765 4454 4789999999999999999876443
No 28
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.87 E-value=5e-20 Score=189.40 Aligned_cols=229 Identities=16% Similarity=0.202 Sum_probs=163.8
Q ss_pred ceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeee
Q 003217 232 GEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSIL 310 (838)
Q Consensus 232 ~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~ 310 (838)
+.+....+|...|+|+.| ||+ |+|||.||+|||||+.+++...++. +|
T Consensus 6 ~~i~~~~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~~~~~~l~-------------------~H---------- 54 (293)
T d1p22a2 6 QRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILT-------------------GH---------- 54 (293)
T ss_dssp CCEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEEC-------------------CC----------
T ss_pred EEEeccCCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCCcEEEEEe-------------------cC----------
Confidence 455566788999998765 677 8999999999999998765433332 22
Q ss_pred cCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEEEecCCceEEeeecccCcccccccceeeEEEecCCCCcceeee
Q 003217 311 TSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSF 389 (838)
Q Consensus 311 s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~ 389 (838)
...|.++.. ++..|++++ |++|++|++.++...................
T Consensus 55 ~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 104 (293)
T d1p22a2 55 TGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN---------------------------- 104 (293)
T ss_dssp SSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC----------------------------
T ss_pred CCCEeeeec--ccceeeccccccccccccccccccccccccccccccccccc----------------------------
Confidence 345666655 456777776 6789999999988766554322211000000
Q ss_pred eEeecCcceeeecCCcEEEEec---------cCccccCCCceEEEEEcCCCcEEEEECCCeEEEEcC-CCCeeeEeecCC
Q 003217 390 GFFQRSRNAIMGAADAVRRVAA---------KGGFGDDNRRTEALTTSIDGMIWTGGANGLLLQWDP-NGNRLQDFQYLP 459 (838)
Q Consensus 390 ~~~~~~~~~~~g~~~~v~~v~~---------~g~~~~~~~~v~ala~S~dg~l~Sgs~DgtIrlWD~-~g~~l~tl~~H~ 459 (838)
....+.+..++..+++. ...+..+...+..+.+.++ .+++++.|++|++||. +++++..+.+|.
T Consensus 105 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~s~d~~i~~~d~~~~~~~~~~~~~~ 178 (293)
T d1p22a2 105 -----NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIKVWNTSTCEFVRTLNGHK 178 (293)
T ss_dssp -----TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETT-EEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred -----ccceeecccccceeEeeccccccccccccccccccccccceeccc-ccccccCCCceeeecCCCCcEEEEEcccc
Confidence 00111122222222211 0012334555555555443 4788999999999999 789999999999
Q ss_pred ccEEEEEEcCCEEEEEeeCCeEEEEeCC-CcccccccccccCEEEEEeCCCEEEEEcCCCCeeeeecCC
Q 003217 460 FAVQCLCTFGSQIWVGYMNGIVQVLDLE-GNLLGGWVAHSSPVIKMAVGAGYIFTLANHGGIRGWNVTS 527 (838)
Q Consensus 460 ~~V~sls~dG~~LasGs~DgtIrlWD~~-g~~i~~l~gH~~~V~sla~dg~~l~S~S~DgtIrlWdl~s 527 (838)
..|..+.+++.++++|+.|++|++||+. .+.+..+.+|...|..+..++.++++++.|++|++||+..
T Consensus 179 ~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~sg~~dg~i~iwd~~~ 247 (293)
T d1p22a2 179 RGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 247 (293)
T ss_dssp SCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHH
T ss_pred cccccccCCCCeEEEecCCCEEEEEecccceeeeeecccceeeeeccccceEEEEEcCCCEEEEEECCC
Confidence 9999999999999999999999999987 6788999999999999999999999999999999999754
No 29
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.87 E-value=8.7e-21 Score=199.03 Aligned_cols=290 Identities=10% Similarity=0.048 Sum_probs=175.8
Q ss_pred eeEEEEec--CCEEEE-ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceee-ecCCCCeEEEEEcCCC-CEEEE
Q 003217 134 FLRTIVCT--EEQLWA-GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKES-VKGVSSVMCMVGDEAS-GVVWS 208 (838)
Q Consensus 134 ~~~~l~~~--~~~l~~-g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~~~V~~la~s~dg-~~LaS 208 (838)
.+.+|+.+ ++.|.+ +.|++|||||+.+..... .+... .| .++|.|++|+|++ .+|+|
T Consensus 13 ~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~-----------------~~~~~~~h-~~~V~~v~f~~~~~~~l~s 74 (342)
T d1yfqa_ 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV-----------------DLLQSLRY-KHPLLCCNFIDNTDLQIYV 74 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEE-----------------EEEEEEEC-SSCEEEEEEEESSSEEEEE
T ss_pred CEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcce-----------------EEEEecCC-CCCEEEEEEeCCCCCEEEE
Confidence 46667664 556666 569999999986532211 11111 23 7899999999864 68999
Q ss_pred EeCCCcEEEEECCCCccCCCCCcceeEEeccc-cccEEEEEEecCCC-EEEeeCCCcEEEEECCCcceeeecCCCceeee
Q 003217 209 GHRDGRIMCWKMNARLLDSDDGFGEVLSWQAH-RGPVLSLCISSYGD-LWSGSEGGGIKIWPWEAIEKALSLKPEERHTA 286 (838)
Q Consensus 209 Gs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH-~~~V~slafs~dG~-L~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~ 286 (838)
|+.||+|++|++..+ ........| ........+.+++. +++++.|+++++||+.+..........
T Consensus 75 g~~d~~v~~w~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wd~~~~~~~~~~~~~----- 141 (342)
T d1yfqa_ 75 GTVQGEILKVDLIGS--------PSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKN----- 141 (342)
T ss_dssp EETTSCEEEECSSSS--------SSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEE-----
T ss_pred cccccceeeeecccc--------cccccccccccccccccccccccccccccccccccceeeccccccceeeecc-----
Confidence 999999999999886 333444333 33444445555554 789999999999998543211100000
Q ss_pred EEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEE-eCCCcEEEEeccCccEEEEEec---CCceEEeeeccc
Q 003217 287 ALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWS-AGFLSFALWDARTRELLKVFNI---DGQIENRVDMSL 362 (838)
Q Consensus 287 ~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s-~s~~tI~lWD~~tg~~l~~l~~---~~~~~~~~~~s~ 362 (838)
...+ .. ............+..+++ +.++.|++||+.+++....+.. ...........+
T Consensus 142 ----------~~~~--~~------~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (342)
T d1yfqa_ 142 ----------LNSN--NT------KVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLP 203 (342)
T ss_dssp ----------SCSS--SS------SSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECS
T ss_pred ----------cccc--cc------cceeeeeeeeccCCceeeecCCCcEEEEecccCcccceeeeecccccceeeeEeec
Confidence 0000 00 001112222233444444 4478999999987654222111 000000000000
Q ss_pred CcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEec---------------------cCccccCCCc
Q 003217 363 LPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAA---------------------KGGFGDDNRR 421 (838)
Q Consensus 363 ~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~---------------------~g~~~~~~~~ 421 (838)
........+..++...++. ......+...
T Consensus 204 ------------------------------~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (342)
T d1yfqa_ 204 ------------------------------KEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP 253 (342)
T ss_dssp ------------------------------GGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCC
T ss_pred ------------------------------CCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCccccc
Confidence 0011112222232222221 1122345667
Q ss_pred eEEEEEcCCCc-EEEEECCCeEEEEcC-CCCeeeEee-cCCccEEEEEEcCCEEEEEeeCCeEEEEeCCCcccccccccc
Q 003217 422 TEALTTSIDGM-IWTGGANGLLLQWDP-NGNRLQDFQ-YLPFAVQCLCTFGSQIWVGYMNGIVQVLDLEGNLLGGWVAHS 498 (838)
Q Consensus 422 v~ala~S~dg~-l~Sgs~DgtIrlWD~-~g~~l~tl~-~H~~~V~sls~dG~~LasGs~DgtIrlWD~~g~~i~~l~gH~ 498 (838)
+.+++|+|++. |+||+.||+|++||+ +++++.++. .|...+.+++++|+++++|+.|+++++|... ..++..|.
T Consensus 254 v~~l~~sp~~~~lasg~~Dg~v~vWD~~~~~~l~~~~~~~~~~~~~~s~~~~~l~~a~sdd~~~~~~~~---~~~~~~~~ 330 (342)
T d1yfqa_ 254 VNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLATSDDTFKTNAAI---DQTIELNA 330 (342)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEEECTHHHHCSSS---CTTSCCCC
T ss_pred ceeEEecCCccEEEEECCCCEEEEEECCCCcEEEEecCCCCCEEEEEEeCCCEEEEEEcCCcEEEeeee---CCCccCCC
Confidence 88999999987 899999999999999 788898886 4677889999999999999999999988743 34566777
Q ss_pred cCEEEEE
Q 003217 499 SPVIKMA 505 (838)
Q Consensus 499 ~~V~sla 505 (838)
..|+.+.
T Consensus 331 ~~i~~~~ 337 (342)
T d1yfqa_ 331 SSIYIIF 337 (342)
T ss_dssp CEEEEEE
T ss_pred CeEEEEc
Confidence 7777654
No 30
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.85 E-value=1.4e-20 Score=201.49 Aligned_cols=315 Identities=7% Similarity=-0.002 Sum_probs=187.9
Q ss_pred eeEEEEe-cCCEEEEecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEeCC
Q 003217 134 FLRTIVC-TEEQLWAGGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGHRD 212 (838)
Q Consensus 134 ~~~~l~~-~~~~l~~g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs~D 212 (838)
|...+.. +++.+..++++.|++||+.+.... ...| ...|.+++|+|||+.|++++.|
T Consensus 6 ~~~~fSP~dG~~~a~~~~g~v~v~d~~~~~~~---------------------~~~~-~~~v~~~~~spDg~~l~~~~~~ 63 (360)
T d1k32a3 6 FAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVL---------------------KVPE-PLRIRYVRRGGDTKVAFIHGTR 63 (360)
T ss_dssp GEEEEEECGGGCEEEEETTEEEEECTTSSBEE---------------------ECSC-CSCEEEEEECSSSEEEEEEEET
T ss_pred hcccccCCCCCEEEEEECCeEEEEECCCCcEE---------------------EccC-CCCEEEEEECCCCCEEEEEEcC
Confidence 5667776 677777778899999998654321 1123 6789999999999999887655
Q ss_pred C--cEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEECCCcceeeecCCCceeeeEEE
Q 003217 213 G--RIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPWEAIEKALSLKPEERHTAALI 289 (838)
Q Consensus 213 G--tIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~ 289 (838)
. .|++||.+++ +...+.+|.+.|.+++|+|||+ |++++.|+.+++|++++......+..+
T Consensus 64 ~g~~v~v~d~~~~---------~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 126 (360)
T d1k32a3 64 EGDFLGIYDYRTG---------KAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR-------- 126 (360)
T ss_dssp TEEEEEEEETTTC---------CEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS--------
T ss_pred CCCEEEEEECCCC---------cEEEeeCCCceEEeeeecccccccceeccccccccccccccceeeeeecc--------
Confidence 4 7999999985 4567889999999999999998 789999999999999775432222111
Q ss_pred EeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEe-----------CCCcEEEEeccCccEEEEEecCCceEEee
Q 003217 290 VERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSA-----------GFLSFALWDARTRELLKVFNIDGQIENRV 358 (838)
Q Consensus 290 ~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~-----------s~~tI~lWD~~tg~~l~~l~~~~~~~~~~ 358 (838)
...+..+++++++..++.+ .+..+++||+.+++.......... ...+
T Consensus 127 ---------------------~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~-~~~~ 184 (360)
T d1k32a3 127 ---------------------EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSH-DYAP 184 (360)
T ss_dssp ---------------------SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSB-EEEE
T ss_pred ---------------------cccccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeecccccc-cccc
Confidence 1123334445555544422 123688999999887655433322 2223
Q ss_pred ecccCcccccccceeeEEEecCCCCcceeeeeEeecCcc-eeeecCCcEEEEeccCccccCCCceEEEEEcCCCc-EEEE
Q 003217 359 DMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRN-AIMGAADAVRRVAAKGGFGDDNRRTEALTTSIDGM-IWTG 436 (838)
Q Consensus 359 ~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~-~~~g~~~~v~~v~~~g~~~~~~~~v~ala~S~dg~-l~Sg 436 (838)
.+++.....+. .+.. .. +..+..... ........+..+. .+...+..+.+++++. ++++
T Consensus 185 ~~spdg~~l~~-------~s~~--~~----~~~~d~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~s~~~~~~~~~ 245 (360)
T d1k32a3 185 AFDADSKNLYY-------LSYR--SL----DPSPDRVVLNFSFEVVSKPFVIP------LIPGSPNPTKLVPRSMTSEAG 245 (360)
T ss_dssp EECTTSCEEEE-------EESC--CC----CCEECSSSSCEECCSCBEEEEEE------SSTTCCCGGGCCCGGGSCCCC
T ss_pred cccCCCCEEEE-------EeCC--Cc----eEcccccccceeeccccceEEEe------cccCccccceECCCcCccccc
Confidence 33332221110 0000 00 000000000 0000000011110 0111111233455554 3333
Q ss_pred ECCC-----eEEEEcCCCCeeeEeecCCccEEEEEE--cC---CEEEEEeeCCeEEEEeCCCcccccccccccCEEEEE-
Q 003217 437 GANG-----LLLQWDPNGNRLQDFQYLPFAVQCLCT--FG---SQIWVGYMNGIVQVLDLEGNLLGGWVAHSSPVIKMA- 505 (838)
Q Consensus 437 s~Dg-----tIrlWD~~g~~l~tl~~H~~~V~sls~--dG---~~LasGs~DgtIrlWD~~g~~i~~l~gH~~~V~sla- 505 (838)
..+. .+..++..+.....+..+.+.+..+.. .+ .++++++.++.|++||++++.+. .|.+.|.+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~---~~~~~v~~~~~ 322 (360)
T d1k32a3 246 EYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT---EVKNNLTDLRL 322 (360)
T ss_dssp CCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE---EEEEEEEEEEE
T ss_pred ceeecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEE---EecCCcCEEEE
Confidence 3221 233444444344555666666666543 23 37888889999999999864433 3445587776
Q ss_pred -eCCCEEEEEcCCCCeeeeecCCCCCC
Q 003217 506 -VGAGYIFTLANHGGIRGWNVTSPGPL 531 (838)
Q Consensus 506 -~dg~~l~S~S~DgtIrlWdl~s~~~~ 531 (838)
+||++|++++.||+|++||+..+...
T Consensus 323 SpDG~~l~~~~~Dg~i~v~d~~~~~~~ 349 (360)
T d1k32a3 323 SADRKTVMVRKDDGKIYTFPLEKPEDE 349 (360)
T ss_dssp CTTSCEEEEEETTSCEEEEESSCTTSC
T ss_pred CCCCCEEEEEECCCeEEEEECCCCCcc
Confidence 58999999999999999999876553
No 31
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.81 E-value=5.4e-19 Score=198.43 Aligned_cols=332 Identities=8% Similarity=-0.024 Sum_probs=200.7
Q ss_pred ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCC
Q 003217 148 GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDS 227 (838)
Q Consensus 148 g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~ 227 (838)
+.|++|+|||.++...... +.....|..++|||||++|++++.||+|++||+.++..
T Consensus 39 ~d~g~v~v~D~~t~~v~~~---------------------~~~g~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~-- 95 (432)
T d1qksa2 39 RDAGQIALIDGSTYEIKTV---------------------LDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP-- 95 (432)
T ss_dssp TTTTEEEEEETTTCCEEEE---------------------EECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--
T ss_pred cCCCEEEEEECCCCcEEEE---------------------EeCCCCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCc--
Confidence 5688999999987654321 11123689999999999999999999999999988620
Q ss_pred CCCcceeEEeccccccEEEEEEecCCC-E-EEeeCCCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccc
Q 003217 228 DDGFGEVLSWQAHRGPVLSLCISSYGD-L-WSGSEGGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNG 305 (838)
Q Consensus 228 ~~~~~~~~~l~gH~~~V~slafs~dG~-L-~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~ 305 (838)
....++....+|.+.+.+++|||||+ | ++++.|++|+|||.++++......... .....
T Consensus 96 -~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~------------------~~~~~ 156 (432)
T d1qksa2 96 -TTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRG------------------MTYDE 156 (432)
T ss_dssp -CEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCE------------------ECTTT
T ss_pred -eEEEEEecCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCC------------------ccccc
Confidence 11112333457888999999999998 5 689999999999998765433221110 01111
Q ss_pred eeeeecCCeEEEEEcCCCCEE-EEeC-CCcEEEEeccCccEEEEEec-CCceEEeeecccCccccc---ccceeeEEEec
Q 003217 306 FSSILTSDIKNLLSDHSRAKV-WSAG-FLSFALWDARTRELLKVFNI-DGQIENRVDMSLLPDFAM---EDEFKTKIVTS 379 (838)
Q Consensus 306 ~~~~~s~~v~~las~~~~~~V-~s~s-~~tI~lWD~~tg~~l~~l~~-~~~~~~~~~~s~~~~~~~---~~~~~~~~~s~ 379 (838)
....+.+....+++++++..+ ++.. .+.|.+||..+++.+++... .+.....+.+++.....+ .....+.++..
T Consensus 157 ~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~g~~~~~~~~spdg~~~~va~~~~~~v~v~d~ 236 (432)
T d1qksa2 157 QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDT 236 (432)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEET
T ss_pred eeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcccCccccceECCCCCEEEEeccccceEEEeec
Confidence 122235566677777777654 4444 36899999998876554332 233223445555443221 01111111111
Q ss_pred CCCCccee-------------eeeEe-e-cCcceeeec-CCcEEEEec--cCccccCCCceEEEEEcCCCc-EEEEECCC
Q 003217 380 SKKDKAQS-------------SFGFF-Q-RSRNAIMGA-ADAVRRVAA--KGGFGDDNRRTEALTTSIDGM-IWTGGANG 440 (838)
Q Consensus 380 ~~~~~~~~-------------s~~~~-~-~~~~~~~g~-~~~v~~v~~--~g~~~~~~~~v~ala~S~dg~-l~Sgs~Dg 440 (838)
. ..+... ...+. + .+......+ .++...++. ......+..++...++++++. +++++.++
T Consensus 237 ~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~ 315 (432)
T d1qksa2 237 K-EGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPN 315 (432)
T ss_dssp T-TTEEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTT
T ss_pred c-cceEEEEeccCccccccCcccceecCCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCC
Confidence 0 000000 00010 0 011111111 133332222 123334566788889999876 78999999
Q ss_pred eEEEEcCCCCeeeEeecCCccEEEEE-EcCCEEEEEeeCCeEEEEeCCCcccccccccccCEEEEEe--CCCEEEEEc--
Q 003217 441 LLLQWDPNGNRLQDFQYLPFAVQCLC-TFGSQIWVGYMNGIVQVLDLEGNLLGGWVAHSSPVIKMAV--GAGYIFTLA-- 515 (838)
Q Consensus 441 tIrlWD~~g~~l~tl~~H~~~V~sls-~dG~~LasGs~DgtIrlWD~~g~~i~~l~gH~~~V~sla~--dg~~l~S~S-- 515 (838)
++++|+... +..|.....+++ +||+.+++|+.|+++++||... ...+..|...|.++++ ||++++...
T Consensus 316 ~~~lw~~~~-----~~~~~~~~~sv~vpDg~~la~~s~d~~~k~w~~~~--~~~l~~~~~~v~~~~fS~DG~~v~~S~~~ 388 (432)
T d1qksa2 316 SQYLYVDAT-----LNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAE--WAGITEGQPRVVQGEFNKDGTEVWFSVWN 388 (432)
T ss_dssp CSEEEEECT-----TCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHH--HHTCCSSCCEEEEEEECTTSSEEEEEEEC
T ss_pred ccceeeccc-----CCCCCCeeeEEEEEechhhcccccCCceEeccccc--ccccCCCCCcEEEeEECCCCCEEEEEEec
Confidence 999998632 122332222232 7999999999999999999741 1334467778888874 888775332
Q ss_pred ---CCCCeeeeecCCCC
Q 003217 516 ---NHGGIRGWNVTSPG 529 (838)
Q Consensus 516 ---~DgtIrlWdl~s~~ 529 (838)
.|+.|+|||..+..
T Consensus 389 ~~~~~g~i~i~D~~T~k 405 (432)
T d1qksa2 389 GKDQESALVVVDDKTLE 405 (432)
T ss_dssp CTTSCCEEEEEETTTTE
T ss_pred CCCCCCcEEEEECCCce
Confidence 46789999977653
No 32
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.80 E-value=2.9e-18 Score=178.80 Aligned_cols=248 Identities=8% Similarity=-0.020 Sum_probs=169.0
Q ss_pred eeEEEEecCCEEEE-ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEeCC
Q 003217 134 FLRTIVCTEEQLWA-GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGHRD 212 (838)
Q Consensus 134 ~~~~l~~~~~~l~~-g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs~D 212 (838)
.+++|+.+. |++ +.|++|++||+.+.. ..| .+.|.|++++++ +.++|++.|
T Consensus 15 ~I~~l~~s~--l~sgs~Dg~v~~Wd~~~~~------------------------~~h-~~~V~~~~~~~~-~~~~s~s~D 66 (287)
T d1pgua2 15 GITALTVNP--LISGSYDGRIMEWSSSSMH------------------------QDH-SNLIVSLDNSKA-QEYSSISWD 66 (287)
T ss_dssp CEEEEETTT--TEEEETTSCEEETTTTEEE------------------------CCC-CSCEEEEECCST-TCCEEEETT
T ss_pred ceEEEEECc--EEEEeCCCeEEEEECCCCC------------------------CCC-CCCEEEEEecCC-CeEEEEeec
Confidence 455666544 555 669999999986521 123 678999999865 568999999
Q ss_pred CcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCCEEEeeCCCcEEEEECCCcceeeecCCCceeeeEEEEee
Q 003217 213 GRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGDLWSGSEGGGIKIWPWEAIEKALSLKPEERHTAALIVER 292 (838)
Q Consensus 213 GtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~L~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (838)
++||+|++... . +...+..+++++++.++..+.++.+.+|+..++.....+..
T Consensus 67 ~~v~~w~~~~~------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 119 (287)
T d1pgua2 67 DTLKVNGITKH------------E---FGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRL------------ 119 (287)
T ss_dssp TEEEETTEEEE------------E---CSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEEC------------
T ss_pred ccccccccccc------------c---cccceeeeeeccCCceEEEeecccceeeeccceeeeeeccc------------
Confidence 99999987652 1 13356788899999876666777888998866443221110
Q ss_pred ceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-C-CcEEEEeccCccEEEEEecCCceEEeeecccCccccccc
Q 003217 293 SYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-F-LSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAMED 370 (838)
Q Consensus 293 s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-~-~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~~ 370 (838)
.....++ .+.+..++.++ + +.+++|++.+.+....+...
T Consensus 120 ------------------~~~~~~~--~~~~~~~~v~~~~~~~v~~~~~~~~~~~~~~~~~------------------- 160 (287)
T d1pgua2 120 ------------------NSPGSAV--SLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTP------------------- 160 (287)
T ss_dssp ------------------SSCEEEE--EECSSEEEEEETTTSCEEEEETTEEEEEEECSSC-------------------
T ss_pred ------------------cceeeee--eccCcceeeeccccceeeeeeccccceeeeeeec-------------------
Confidence 1112222 22344444443 3 47999998765543332110
Q ss_pred ceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEecc-------CccccCCCceEEEEEcCCC-----------c
Q 003217 371 EFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAK-------GGFGDDNRRTEALTTSIDG-----------M 432 (838)
Q Consensus 371 ~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~-------g~~~~~~~~v~ala~S~dg-----------~ 432 (838)
.......+.|.+++..+++|..++..+++.. ..+..|...|.+++++|++ .
T Consensus 161 -----------~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~ 229 (287)
T d1pgua2 161 -----------LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDL 229 (287)
T ss_dssp -----------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCE
T ss_pred -----------cCCceeEEEeccCccccccccccccccceeecccccccccccccccccceeeecccccccccccCCCCe
Confidence 0112234556666666777877776666641 2345678889999988754 4
Q ss_pred EEEEECCCeEEEEcC-C-CCeeeEeecCCccEEEEEE-cCCEEEEEeeCCeEEEEeC
Q 003217 433 IWTGGANGLLLQWDP-N-GNRLQDFQYLPFAVQCLCT-FGSQIWVGYMNGIVQVLDL 486 (838)
Q Consensus 433 l~Sgs~DgtIrlWD~-~-g~~l~tl~~H~~~V~sls~-dG~~LasGs~DgtIrlWD~ 486 (838)
+++|+.|++|++||+ + +++++.+.+|...|+++++ ++..|++++.|++|++||+
T Consensus 230 l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~~l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 230 VATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKRWNV 286 (287)
T ss_dssp EEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEEEEE
T ss_pred eEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCCEEEEEECCCeEEEEEE
Confidence 889999999999998 5 5788888999999999975 3457999999999999985
No 33
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.80 E-value=5.5e-18 Score=188.85 Aligned_cols=321 Identities=10% Similarity=0.003 Sum_probs=176.5
Q ss_pred ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCC
Q 003217 148 GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDS 227 (838)
Q Consensus 148 g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~ 227 (838)
+.|++|+|||+++.+.... +.+...+..++|||||++|++++.||+|++||+.++.+
T Consensus 39 ~~dg~v~vwD~~t~~~~~~---------------------l~~g~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~-- 95 (426)
T d1hzua2 39 RDAGQIALVDGDSKKIVKV---------------------IDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEP-- 95 (426)
T ss_dssp TTTTEEEEEETTTCSEEEE---------------------EECCSSEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--
T ss_pred cCCCEEEEEECCCCcEEEE---------------------EeCCCCeeEEEECCCCCEEEEEeCCCCEEEEEccCCce--
Confidence 4589999999987654321 11134689999999999999999999999999998731
Q ss_pred CCCcceeEEeccccccEEEEEEecCCC-E-EEeeCCCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccc
Q 003217 228 DDGFGEVLSWQAHRGPVLSLCISSYGD-L-WSGSEGGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNG 305 (838)
Q Consensus 228 ~~~~~~~~~l~gH~~~V~slafs~dG~-L-~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~ 305 (838)
.....+....+|.+.+.+++|+|||+ | ++++.++++++||..+.........+.. ....
T Consensus 96 -~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~------------------~~~~ 156 (426)
T d1hzua2 96 -TKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGM------------------TVDT 156 (426)
T ss_dssp -EEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEE------------------CSSS
T ss_pred -eEEEEEeCCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCC------------------Cccc
Confidence 00011233457888999999999998 5 4677899999999987543322211100 1111
Q ss_pred eeeeecCCeEEEEEcCCCCEEEEeCC--CcEEEEeccCccEEEE-EecCCceEEeeecccCcccccccceeeEEEecCCC
Q 003217 306 FSSILTSDIKNLLSDHSRAKVWSAGF--LSFALWDARTRELLKV-FNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKK 382 (838)
Q Consensus 306 ~~~~~s~~v~~las~~~~~~V~s~s~--~tI~lWD~~tg~~l~~-l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~ 382 (838)
....+.+....++.++++..++.... +.+.+++..++..+.. ...++.......+++..... .+....
T Consensus 157 ~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~a~~~- 227 (426)
T d1hzua2 157 QTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYF--------MTAANN- 227 (426)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEECTTSCEE--------EEEETT-
T ss_pred eeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeECCCCcEE--------Eeeeec-
Confidence 12222444556666666665554332 3455555554432211 11122211122222211110 000000
Q ss_pred CcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCceEEEEEcCCCcEE--EEECCCeEEEEcC--------CCCee
Q 003217 383 DKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRRTEALTTSIDGMIW--TGGANGLLLQWDP--------NGNRL 452 (838)
Q Consensus 383 ~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~v~ala~S~dg~l~--Sgs~DgtIrlWD~--------~g~~l 452 (838)
... +.. +......+......+.. .+............+.++ +.+.|+.+.+|+. .++++
T Consensus 228 ~~~---~~~-------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~~~ 296 (426)
T d1hzua2 228 SNK---VAV-------IDSKDRRLSALVDVGKT-PHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKV 296 (426)
T ss_dssp CSE---EEE-------EETTTTEEEEEEECSSC-CCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTSEE
T ss_pred ccc---eee-------eecccccEEEEeccCCc-ccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccceEe
Confidence 000 000 00000000000000000 000111111111112222 2234556666654 24788
Q ss_pred eEeecCCccEEEEE--EcCCEEEE-------EeeCCeEEEEeCC-Cccccc---------ccccccCEEEEE--eCCCEE
Q 003217 453 QDFQYLPFAVQCLC--TFGSQIWV-------GYMNGIVQVLDLE-GNLLGG---------WVAHSSPVIKMA--VGAGYI 511 (838)
Q Consensus 453 ~tl~~H~~~V~sls--~dG~~Las-------Gs~DgtIrlWD~~-g~~i~~---------l~gH~~~V~sla--~dg~~l 511 (838)
.++.+|...|.+++ +||++||+ |+.|++|+|||++ +++..+ +..|...|++++ +||+++
T Consensus 297 ~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~~~~~~~~~~~~~~~rv~~~~fSpDGk~i 376 (426)
T d1hzua2 297 AELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEV 376 (426)
T ss_dssp EEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCCEEEEEECSSSSEE
T ss_pred EEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEEeccchhcccCCCCccEEEEEECCCCCEE
Confidence 99999999998775 58999994 5678999999986 554332 335566788877 488876
Q ss_pred -EEE----cCCCCeeeeecCCCCC
Q 003217 512 -FTL----ANHGGIRGWNVTSPGP 530 (838)
Q Consensus 512 -~S~----S~DgtIrlWdl~s~~~ 530 (838)
+|+ +.|++|++||..+...
T Consensus 377 ~vs~~~~~~~~~~i~v~D~~T~k~ 400 (426)
T d1hzua2 377 WFSVWNGKNDSSALVVVDDKTLKL 400 (426)
T ss_dssp EEEECCCTTSCCEEEEEETTTTEE
T ss_pred EEEEecCCCCCCeEEEEECCCCeE
Confidence 453 4688899999877543
No 34
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.76 E-value=3.6e-16 Score=162.35 Aligned_cols=251 Identities=9% Similarity=0.075 Sum_probs=171.3
Q ss_pred ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCccC
Q 003217 148 GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVV-WSGHRDGRIMCWKMNARLLD 226 (838)
Q Consensus 148 g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~L-aSGs~DGtIrvWd~~~g~~~ 226 (838)
+.|++|+|||+++.+.... +.....+..++|+|||++| ++++.+++|++||+.++
T Consensus 9 ~~~~~v~v~D~~t~~~~~~---------------------i~~g~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~--- 64 (301)
T d1l0qa2 9 SESDNISVIDVTSNKVTAT---------------------IPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN--- 64 (301)
T ss_dssp TTTTEEEEEETTTTEEEEE---------------------EECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT---
T ss_pred CCCCEEEEEECCCCeEEEE---------------------EECCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCC---
Confidence 4578999999987653321 1112356789999999987 57778999999999987
Q ss_pred CCCCcceeEEeccccccEEEEEEecCCC-E-EEeeCCCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceecc
Q 003217 227 SDDGFGEVLSWQAHRGPVLSLCISSYGD-L-WSGSEGGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVN 304 (838)
Q Consensus 227 ~~~~~~~~~~l~gH~~~V~slafs~dG~-L-~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~ 304 (838)
+.+.++..|.. +.+++|+++|. + ++++.++.+++|+..+.+....+..
T Consensus 65 -----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 114 (301)
T d1l0qa2 65 -----NVIATVPAGSS-PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT------------------------ 114 (301)
T ss_dssp -----EEEEEEECSSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC------------------------
T ss_pred -----ceeeeeecccc-ccccccccccccccccccccceeeecccccceeeeeccc------------------------
Confidence 66777777764 57899999997 3 5778899999999976543222111
Q ss_pred ceeeeecCCeEEEEEcCCCCEEEEeC--CCcEEEEeccCccEEEEEecCCceEEeeecccCcccccccceeeEEEecCCC
Q 003217 305 GFSSILTSDIKNLLSDHSRAKVWSAG--FLSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKK 382 (838)
Q Consensus 305 ~~~~~~s~~v~~las~~~~~~V~s~s--~~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~ 382 (838)
.....++++++++..++.+. +.++.+|+..++..+..+..+.
T Consensus 115 ------~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------ 158 (301)
T d1l0qa2 115 ------GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR------------------------------ 158 (301)
T ss_dssp ------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS------------------------------
T ss_pred ------cccceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCC------------------------------
Confidence 22345566677777655443 4678899998887765543211
Q ss_pred CcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCceEEEEEcCCCc-EEEEEC-CCeEEEEcCC-CCeeeEeecCC
Q 003217 383 DKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRRTEALTTSIDGM-IWTGGA-NGLLLQWDPN-GNRLQDFQYLP 459 (838)
Q Consensus 383 ~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~v~ala~S~dg~-l~Sgs~-DgtIrlWD~~-g~~l~tl~~H~ 459 (838)
.+..+++++++. +++++. ++.+.+|+.. .+....+..+.
T Consensus 159 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (301)
T d1l0qa2 159 --------------------------------------SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA 200 (301)
T ss_dssp --------------------------------------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS
T ss_pred --------------------------------------CceEEEeeccccceeeecccccccccccccceeeeecccccC
Confidence 122345666665 555554 4667788874 45555555444
Q ss_pred ccEEEE--EEcCCEEEEEee---CCeEEEEeCC-CcccccccccccCEEEEE--eCCCEE-EEEcCCCCeeeeecCCC
Q 003217 460 FAVQCL--CTFGSQIWVGYM---NGIVQVLDLE-GNLLGGWVAHSSPVIKMA--VGAGYI-FTLANHGGIRGWNVTSP 528 (838)
Q Consensus 460 ~~V~sl--s~dG~~LasGs~---DgtIrlWD~~-g~~i~~l~gH~~~V~sla--~dg~~l-~S~S~DgtIrlWdl~s~ 528 (838)
. +..+ ..+|+.++++.. +++|++||+. ++++..+..+ ..+.+|+ +||+++ ++++.|++|++||+.+.
T Consensus 201 ~-~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~va~spdg~~l~va~~~~~~i~v~D~~t~ 276 (301)
T d1l0qa2 201 A-PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATN 276 (301)
T ss_dssp E-EEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred C-cceeeccccccccccccccceeeeeeeeecCCCeEEEEEcCC-CCEEEEEEeCCCCEEEEEECCCCeEEEEECCCC
Confidence 3 4444 447887776654 4689999987 6777766554 4577777 478876 58889999999998654
No 35
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=99.75 E-value=2.4e-17 Score=183.55 Aligned_cols=279 Identities=10% Similarity=-0.038 Sum_probs=171.6
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEECCCcceeeec-
Q 003217 201 EASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPWEAIEKALSL- 278 (838)
Q Consensus 201 ~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~~~~~~~~~~- 278 (838)
+.+-++++++.||+|++||+.++ +.+.++.+|. .+.+|+|||||+ |++++.|++|++||+.+++.....
T Consensus 30 ~~~~~~V~~~~dg~v~vwD~~t~--------~~~~~l~~g~-~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~ 100 (426)
T d1hzua2 30 LPNLFSVTLRDAGQIALVDGDSK--------KIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE 100 (426)
T ss_dssp GGGEEEEEETTTTEEEEEETTTC--------SEEEEEECCS-SEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred CCeEEEEEEcCCCEEEEEECCCC--------cEEEEEeCCC-CeeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEE
Confidence 34446788999999999999997 6778888875 589999999999 789999999999999876533211
Q ss_pred -CCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC--CCcEEEEeccCccEEEEEecCCceE
Q 003217 279 -KPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG--FLSFALWDARTRELLKVFNIDGQIE 355 (838)
Q Consensus 279 -~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s--~~tI~lWD~~tg~~l~~l~~~~~~~ 355 (838)
.....+ ..-+..+++++++..+++++ +.++++||..+++++..+..+....
T Consensus 101 i~~~~~~--------------------------~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~~~~~~~ 154 (426)
T d1hzua2 101 IKIGIEA--------------------------RSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTV 154 (426)
T ss_dssp EECCSEE--------------------------EEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECS
T ss_pred EeCCCCC--------------------------cceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEeeccCCCc
Confidence 100000 01112233456777665543 5789999999999988876544321
Q ss_pred EeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecC-Cc-EEEEec-cC-----ccccCCCceEEEEE
Q 003217 356 NRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAA-DA-VRRVAA-KG-----GFGDDNRRTEALTT 427 (838)
Q Consensus 356 ~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~-~~-v~~v~~-~g-----~~~~~~~~v~ala~ 427 (838)
....+....... .+.+.+++...+.... .+ +..+.. .+ ....+...+..+++
T Consensus 155 ~~~~~~~~~~~~--------------------~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (426)
T d1hzua2 155 DTQTYHPEPRVA--------------------AIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGGW 214 (426)
T ss_dssp SSCCEESCCCEE--------------------EEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEECCSSEEEEEE
T ss_pred cceeecCCCcee--------------------EEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEeccCCccEeeeE
Confidence 111111111000 0111111111111110 11 111111 00 11234556778999
Q ss_pred cCCCc-EEEEE-CCCeEEEEcC-CCCeeeEeecC----CccEEEEEEcCC-EE--EEEeeCCeEEEEeCC--------Cc
Q 003217 428 SIDGM-IWTGG-ANGLLLQWDP-NGNRLQDFQYL----PFAVQCLCTFGS-QI--WVGYMNGIVQVLDLE--------GN 489 (838)
Q Consensus 428 S~dg~-l~Sgs-~DgtIrlWD~-~g~~l~tl~~H----~~~V~sls~dG~-~L--asGs~DgtIrlWD~~--------g~ 489 (838)
+|+++ ++++. .+..+.+|+. +++.+..+... ......+...+. .+ ++.+.|+.+.+|+.. ++
T Consensus 215 ~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~~~~~~~~~~~~~~~ 294 (426)
T d1hzua2 215 DSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWK 294 (426)
T ss_dssp CTTSCEEEEEETTCSEEEEEETTTTEEEEEEECSSCCCCSCCEEEEETTTEEEEEEECTTTCEEEEEECCTTTCTTTBTS
T ss_pred CCCCcEEEeeeecccceeeeecccccEEEEeccCCcccccceeeeecCCCCceEEeccCCCceEEEeeccccccccccce
Confidence 99998 44444 5677999999 67777666532 222222333333 22 233458899999853 35
Q ss_pred ccccccccccCEEEEE--eCCCEEE-------EEcCCCCeeeeecCCCCCCchh
Q 003217 490 LLGGWVAHSSPVIKMA--VGAGYIF-------TLANHGGIRGWNVTSPGPLDSI 534 (838)
Q Consensus 490 ~i~~l~gH~~~V~sla--~dg~~l~-------S~S~DgtIrlWdl~s~~~~d~~ 534 (838)
+..++.+|...|.+++ +|+++++ +++.|++|++||+.+......+
T Consensus 295 ~~~~l~g~~~~v~~v~~sPdg~~l~v~~~~~~s~~~~~tv~vwd~~t~~~~~~~ 348 (426)
T d1hzua2 295 KVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQV 348 (426)
T ss_dssp EEEEEECSSSCCCCEECCTTCSEEEECCTTCSSHHHHTCEEEEETTCTTSCCEE
T ss_pred EeEEEecCCCceeEEEcCCCCceEEEeecCCCCcccCCEEEEEECCCCCcCeEE
Confidence 6788999999999888 5788888 5678999999999887665443
No 36
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=99.73 E-value=7.1e-17 Score=172.11 Aligned_cols=320 Identities=12% Similarity=0.064 Sum_probs=177.7
Q ss_pred CCC-cCcccccCCCcccccCcccccCCCCCCCceeecCCCCCccccCceeEEEEec--CCEEEE-ecCC--CEEEEeCCC
Q 003217 87 SSS-LPEYIGKGGDIPMFKPPVRAALHPARPPSLEVKPHPLRETQIGCFLRTIVCT--EEQLWA-GGEN--GLRVWNLKE 160 (838)
Q Consensus 87 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~l~~-g~d~--~vrvWd~~~ 160 (838)
|+| -.++|+.++...+|-.++... +.+.+ +|+ ..++.++.+ ++.|+. +.+. .|++||+++
T Consensus 10 fSP~dG~~~a~~~~g~v~v~d~~~~------~~~~~-~~~-------~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~ 75 (360)
T d1k32a3 10 FSPLDGDLIAFVSRGQAFIQDVSGT------YVLKV-PEP-------LRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRT 75 (360)
T ss_dssp EEECGGGCEEEEETTEEEEECTTSS------BEEEC-SCC-------SCEEEEEECSSSEEEEEEEETTEEEEEEEETTT
T ss_pred ccCCCCCEEEEEECCeEEEEECCCC------cEEEc-cCC-------CCEEEEEECCCCCEEEEEEcCCCCEEEEEECCC
Confidence 555 566776555434544433221 11222 343 235555554 445554 4443 799999976
Q ss_pred CccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccc
Q 003217 161 LYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAH 240 (838)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH 240 (838)
..... +. .+ ...|.+++|+|+|++|++++.|+.+++|+++++ +....+..|
T Consensus 76 ~~~~~------------------~~--~~-~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 126 (360)
T d1k32a3 76 GKAEK------------------FE--EN-LGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG--------KPTVIERSR 126 (360)
T ss_dssp CCEEE------------------CC--CC-CCSEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECS
T ss_pred CcEEE------------------ee--CC-CceEEeeeecccccccceecccccccccccccc--------ceeeeeecc
Confidence 43221 11 12 678999999999999999999999999999987 566778899
Q ss_pred cccEEEEEEecCCC-EEE----------eeCCCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeee
Q 003217 241 RGPVLSLCISSYGD-LWS----------GSEGGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSI 309 (838)
Q Consensus 241 ~~~V~slafs~dG~-L~S----------gS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~ 309 (838)
...+.+++|+|||+ |+. ++.++.+++|++.+++... +..+
T Consensus 127 ~~~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~-~~~~---------------------------- 177 (360)
T d1k32a3 127 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFA-ATTE---------------------------- 177 (360)
T ss_dssp SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEE-CSCS----------------------------
T ss_pred cccccchhhccceeeeeeeccccccceeeccccceeeeccccCceee-eccc----------------------------
Confidence 99999999999998 542 4456679999997643221 1110
Q ss_pred ecCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEEEecCCceEEeeecccCcccccccceeeEEEecCCCCcceee
Q 003217 310 LTSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSS 388 (838)
Q Consensus 310 ~s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s 388 (838)
...+..++.++++..|+.++ +..+++||........ . .......+.+......... ++..........
T Consensus 178 -~~~~~~~~~spdg~~l~~~s~~~~~~~~d~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~-------~s~~~~~~~~~~ 246 (360)
T d1k32a3 178 -NSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSF--E-VVSKPFVIPLIPGSPNPTK-------LVPRSMTSEAGE 246 (360)
T ss_dssp -SSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEEC--C-SCBEEEEEESSTTCCCGGG-------CCCGGGSCCCCC
T ss_pred -ccccccccccCCCCEEEEEeCCCceEcccccccceee--c-cccceEEEecccCccccce-------ECCCcCcccccc
Confidence 12344566677777777665 5788899987655321 0 0100011111110000000 000000000000
Q ss_pred eeEeecCcceeeecCCcEEEEec-cC---ccccCCCceEEEEEcCCC---c-EEEEECCCeEEEEcCCCCeeeEeecCCc
Q 003217 389 FGFFQRSRNAIMGAADAVRRVAA-KG---GFGDDNRRTEALTTSIDG---M-IWTGGANGLLLQWDPNGNRLQDFQYLPF 460 (838)
Q Consensus 389 ~~~~~~~~~~~~g~~~~v~~v~~-~g---~~~~~~~~v~ala~S~dg---~-l~Sgs~DgtIrlWD~~g~~l~tl~~H~~ 460 (838)
.. ..+....+..+.. .+ .+..+...+..+.+...+ . +++++.++.|++||+++..+..+ .+
T Consensus 247 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~---~~ 315 (360)
T d1k32a3 247 YD--------LNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEV---KN 315 (360)
T ss_dssp CC--------CTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEE---EE
T ss_pred ee--------ecccccceeecccCcCceeEeeecCCCceEEEEEecCCCeeEEEecCCCCEEEEEECCCCeEEEe---cC
Confidence 00 0000000000000 00 001111222233333332 2 56788899999999965444444 34
Q ss_pred cEEEE--EEcCCEEEEEeeCCeEEEEeCC-CcccccccccccC
Q 003217 461 AVQCL--CTFGSQIWVGYMNGIVQVLDLE-GNLLGGWVAHSSP 500 (838)
Q Consensus 461 ~V~sl--s~dG~~LasGs~DgtIrlWD~~-g~~i~~l~gH~~~ 500 (838)
.|.++ ++||++|++++.||+|++||++ +....++.-+..+
T Consensus 316 ~v~~~~~SpDG~~l~~~~~Dg~i~v~d~~~~~~~~~~~~d~~~ 358 (360)
T d1k32a3 316 NLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVETDKRP 358 (360)
T ss_dssp EEEEEEECTTSCEEEEEETTSCEEEEESSCTTSCEECCCCSSC
T ss_pred CcCEEEECCCCCEEEEEECCCeEEEEECCCCCcceEEEecccc
Confidence 57666 4589999999999999999987 5555555444443
No 37
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.71 E-value=2.2e-15 Score=158.43 Aligned_cols=279 Identities=11% Similarity=0.046 Sum_probs=163.6
Q ss_pred ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCccC
Q 003217 148 GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVV-WSGHRDGRIMCWKMNARLLD 226 (838)
Q Consensus 148 g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~L-aSGs~DGtIrvWd~~~g~~~ 226 (838)
+.|++|+|||+++...... +....+ ...+.+++++|||++| ++++.|+.|.+||+.++
T Consensus 8 ~~d~~v~v~D~~s~~~~~~-----------------i~~~~~-~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~--- 66 (337)
T d1pbyb_ 8 ARPDKLVVIDTEKMAVDKV-----------------ITIADA-GPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG--- 66 (337)
T ss_dssp ETTTEEEEEETTTTEEEEE-----------------EECTTC-TTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC---
T ss_pred cCCCEEEEEECCCCeEEEE-----------------EECCCC-CCCccEEEECCCCCEEEEEECCCCeEEEEECCCC---
Confidence 5689999999987654321 100001 3356789999999987 57788999999999997
Q ss_pred CCCCcceeEEecccc-----ccEEEEEEecCCC-EEEee------------CCCcEEEEECCCcceeeecCCCceeeeEE
Q 003217 227 SDDGFGEVLSWQAHR-----GPVLSLCISSYGD-LWSGS------------EGGGIKIWPWEAIEKALSLKPEERHTAAL 288 (838)
Q Consensus 227 ~~~~~~~~~~l~gH~-----~~V~slafs~dG~-L~SgS------------~DgtIrvWd~~~~~~~~~~~~~~~~~~~~ 288 (838)
+.+..+..|. ..+..++|+|||+ +++++ .+..+.+||..+.+....+.
T Consensus 67 -----~~~~~~~~~~~~~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--------- 132 (337)
T d1pbyb_ 67 -----ETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE--------- 132 (337)
T ss_dssp -----CEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE---------
T ss_pred -----cEEEEEecCCCcccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEecc---------
Confidence 5566655543 3445789999998 55554 35677777776543221110
Q ss_pred EEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeCCCcEEEEeccCccEEEEEecCCceEEeeecccCccccc
Q 003217 289 IVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAGFLSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAM 368 (838)
Q Consensus 289 ~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s~~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~ 368 (838)
....+..+++++++..+++++ ..+.+||..++++..++..+.... ....++......
T Consensus 133 ---------------------~~~~~~~~~~s~dg~~l~~~~-~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 189 (337)
T d1pbyb_ 133 ---------------------APRQITMLAWARDGSKLYGLG-RDLHVMDPEAGTLVEDKPIQSWEA-ETYAQPDVLAVW 189 (337)
T ss_dssp ---------------------CCSSCCCEEECTTSSCEEEES-SSEEEEETTTTEEEEEECSTTTTT-TTBCCCBCCCCC
T ss_pred ---------------------ccCCceEEEEcCCCCEEEEEc-CCcceeeeecCcEEEEeecCCccc-cceecCCcceee
Confidence 012344567778888887765 457899999999888775432210 000111000000
Q ss_pred ccceeeEEEecCCCCccee---eeeEeecCcceeeecCC-cEEEEec-cC-----ccccCCCceEEEEEcCCCcEEEEEC
Q 003217 369 EDEFKTKIVTSSKKDKAQS---SFGFFQRSRNAIMGAAD-AVRRVAA-KG-----GFGDDNRRTEALTTSIDGMIWTGGA 438 (838)
Q Consensus 369 ~~~~~~~~~s~~~~~~~~~---s~~~~~~~~~~~~g~~~-~v~~v~~-~g-----~~~~~~~~v~ala~S~dg~l~Sgs~ 438 (838)
.......... ....++.. ....+... ++..+.. .+ .+..+...+..+++++++..+.+.
T Consensus 190 ---------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 258 (337)
T d1pbyb_ 190 ---------NQHESSGVMATPFYTARKDID-PADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA- 258 (337)
T ss_dssp ---------CCCTTTTEEEEEEEEEBTTSC-TTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-
T ss_pred ---------ccccccceeeeeeeeeeeccc-eeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc-
Confidence 0000000000 00000000 00011111 1111111 11 122344556677888888765444
Q ss_pred CCeEEEEcC-CCCeeeEeecCCccEEEEEE--cCCEEEEEeeCCeEEEEeCC-Ccccccccc
Q 003217 439 NGLLLQWDP-NGNRLQDFQYLPFAVQCLCT--FGSQIWVGYMNGIVQVLDLE-GNLLGGWVA 496 (838)
Q Consensus 439 DgtIrlWD~-~g~~l~tl~~H~~~V~sls~--dG~~LasGs~DgtIrlWD~~-g~~i~~l~g 496 (838)
+++|++||+ +++++..+. +...+.++++ ||++|++|+.|++|+|||++ ++.+.++..
T Consensus 259 ~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~v~~i~~ 319 (337)
T d1pbyb_ 259 YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred cccEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcEEEEEEC
Confidence 688999999 678887775 4566777754 79999999999999999987 666665543
No 38
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.65 E-value=5.8e-15 Score=155.82 Aligned_cols=155 Identities=10% Similarity=0.061 Sum_probs=95.3
Q ss_pred CCEEEE-ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEE
Q 003217 142 EEQLWA-GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVV-WSGHRDGRIMCWK 219 (838)
Q Consensus 142 ~~~l~~-g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~L-aSGs~DGtIrvWd 219 (838)
++.|++ +.|++|.|||+++.+.... + .+.+...+.+++|+|||++| ++++.++.|++||
T Consensus 8 ~~~l~~~~~~~~v~v~D~~t~~~~~t-----------------~--~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d 68 (346)
T d1jmxb_ 8 HEYMIVTNYPNNLHVVDVASDTVYKS-----------------C--VMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGID 68 (346)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEE-----------------E--ECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CcEEEEEcCCCEEEEEECCCCCEEEE-----------------E--EcCCCCCcceEEECCCCCEEEEEECCCCcEEEEe
Confidence 334554 5689999999987654321 1 11113456789999999987 5667899999999
Q ss_pred CCCCccCCCCCcceeEEecc------ccccEEEEEEecCCC-EEEee------------CCCcEEEEECCCcceeeecCC
Q 003217 220 MNARLLDSDDGFGEVLSWQA------HRGPVLSLCISSYGD-LWSGS------------EGGGIKIWPWEAIEKALSLKP 280 (838)
Q Consensus 220 ~~~g~~~~~~~~~~~~~l~g------H~~~V~slafs~dG~-L~SgS------------~DgtIrvWd~~~~~~~~~~~~ 280 (838)
+.++ +....+.. +...+..++|+|||+ |+.++ .+..+++|+..+++....+..
T Consensus 69 ~~t~--------~~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 140 (346)
T d1jmxb_ 69 LDTC--------KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT 140 (346)
T ss_dssp TTTT--------EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE
T ss_pred CccC--------eeeeeecccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEe
Confidence 9987 44444422 223466899999998 55443 477788888765432111100
Q ss_pred CceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeCCCcEEEEeccCccEEEEEecCC
Q 003217 281 EERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAGFLSFALWDARTRELLKVFNIDG 352 (838)
Q Consensus 281 ~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s~~tI~lWD~~tg~~l~~l~~~~ 352 (838)
+.. ...+..+..++++ +++..+ ..+.+||+.+++.+..+..+.
T Consensus 141 -------------------~~~--------~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 183 (346)
T d1jmxb_ 141 -------------------FPM--------PRQVYLMRAADDG-SLYVAG-PDIYKMDVKTGKYTVALPLRN 183 (346)
T ss_dssp -------------------EEC--------CSSCCCEEECTTS-CEEEES-SSEEEECTTTCCEEEEECSTT
T ss_pred -------------------eec--------cCceEEEEecCCC-EEEEeC-CcceEEEccCCCEEEEEecCC
Confidence 000 0112223333333 343333 458899999999988876543
No 39
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]}
Probab=99.64 E-value=4.5e-15 Score=165.96 Aligned_cols=306 Identities=9% Similarity=-0.009 Sum_probs=176.6
Q ss_pred eEEEEe--cCCEEEE-ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCce-eeecCCCCeEEEEEcCCCCEE-EEE
Q 003217 135 LRTIVC--TEEQLWA-GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFK-ESVKGVSSVMCMVGDEASGVV-WSG 209 (838)
Q Consensus 135 ~~~l~~--~~~~l~~-g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~g~~~V~~la~s~dg~~L-aSG 209 (838)
...++. +++.+++ +.|++|++||+.+...... .... ...+ .+.+.+.+|+|||++| +++
T Consensus 64 ~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~---------------~~i~~~~~~-~~~~~s~~~SpDG~~l~vs~ 127 (432)
T d1qksa2 64 VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV---------------AEIKIGSEA-RSIETSKMEGWEDKYAIAGA 127 (432)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE---------------EEEECCSEE-EEEEECCSTTCTTTEEEEEE
T ss_pred eeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEE---------------EEEecCCCC-CCeEEecccCCCCCEEEEEc
Confidence 334444 4667876 5689999999976432110 0000 0011 4467777889999975 788
Q ss_pred eCCCcEEEEECCCCccCCCCCcceeEEecc-----------ccccEEEEEEecCCC--EEEeeCCCcEEEEECCCcceee
Q 003217 210 HRDGRIMCWKMNARLLDSDDGFGEVLSWQA-----------HRGPVLSLCISSYGD--LWSGSEGGGIKIWPWEAIEKAL 276 (838)
Q Consensus 210 s~DGtIrvWd~~~g~~~~~~~~~~~~~l~g-----------H~~~V~slafs~dG~--L~SgS~DgtIrvWd~~~~~~~~ 276 (838)
+.|++|++||.+++ +....+.+ +.+.+.+++++++|. +++.+.++.|.+|+..+.+...
T Consensus 128 ~~~~~v~i~d~~t~--------~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~ 199 (432)
T d1qksa2 128 YWPPQYVIMDGETL--------EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLK 199 (432)
T ss_dssp EETTEEEEEETTTC--------CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEE
T ss_pred CCCCeEEEEeCccc--------cceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcce
Confidence 89999999999987 44444443 345677899999997 3688889999999986543211
Q ss_pred ecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC--CCcEEEEeccCccEEEEEecCCce
Q 003217 277 SLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG--FLSFALWDARTRELLKVFNIDGQI 354 (838)
Q Consensus 277 ~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s--~~tI~lWD~~tg~~l~~l~~~~~~ 354 (838)
. ..+ .. ......+++++++..+++++ ...+.+||..+++.+..+......
T Consensus 200 ~--------~~i-------------~~-------g~~~~~~~~spdg~~~~va~~~~~~v~v~d~~~~~~~~~~~~g~~~ 251 (432)
T d1qksa2 200 T--------TEI-------------SA-------ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQT 251 (432)
T ss_dssp E--------EEE-------------EC-------CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSS
T ss_pred E--------EEE-------------cc-------cCccccceECCCCCEEEEeccccceEEEeecccceEEEEeccCccc
Confidence 0 000 00 11245677888888766665 357899999999887765432110
Q ss_pred E---EeeecccCccc-----ccccceeeEEEecCCCC-----cceeeeeEeecCcceeeecCCcEEEEeccCccccCCCc
Q 003217 355 E---NRVDMSLLPDF-----AMEDEFKTKIVTSSKKD-----KAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRR 421 (838)
Q Consensus 355 ~---~~~~~s~~~~~-----~~~~~~~~~~~s~~~~~-----~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~ 421 (838)
. ....+...... ....+..+.++...... .......+.+.+....++..+...++|....+..+...
T Consensus 252 ~~~~~~~~~~~~~~g~~~~~~~lg~~~v~~~~~~~~~~~~~~~~v~~~~~~~~g~~~~~~s~p~~~~lw~~~~~~~~~~~ 331 (432)
T d1qksa2 252 PHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEI 331 (432)
T ss_dssp BCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHH
T ss_pred cccCcccceecCCCCceecccccCCceEEecccccccccccccEEEEEEEcCCCCeEEEEecCCccceeecccCCCCCCe
Confidence 0 00000000000 00001111122111000 01112223333344444443333334433333333333
Q ss_pred eEEEEEcCCCc-EEEEECCCeEEEEcC-CCCeeeEeecCCccEEEEEE--cCCEEEEEe-----eCCeEEEEeCC-Cccc
Q 003217 422 TEALTTSIDGM-IWTGGANGLLLQWDP-NGNRLQDFQYLPFAVQCLCT--FGSQIWVGY-----MNGIVQVLDLE-GNLL 491 (838)
Q Consensus 422 v~ala~S~dg~-l~Sgs~DgtIrlWD~-~g~~l~tl~~H~~~V~sls~--dG~~LasGs-----~DgtIrlWD~~-g~~i 491 (838)
..++++ ||+. +++++.|+++++||+ ++.+ +..|...|.++++ ||++||++. .+|.|+|||.+ +++.
T Consensus 332 ~~sv~v-pDg~~la~~s~d~~~k~w~~~~~~~---l~~~~~~v~~~~fS~DG~~v~~S~~~~~~~~g~i~i~D~~T~k~~ 407 (432)
T d1qksa2 332 SGSVAV-FDIKAMTGDGSDPEFKTLPIAEWAG---ITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELK 407 (432)
T ss_dssp HTCEEE-EEGGGCCCSSSCCCEEEECHHHHHT---CCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEE
T ss_pred eeEEEE-EechhhcccccCCceEecccccccc---cCCCCCcEEEeEECCCCCEEEEEEecCCCCCCcEEEEECCCceEE
Confidence 334555 7776 899999999999998 5533 2356777887754 899887764 46899999987 5665
Q ss_pred ccccc
Q 003217 492 GGWVA 496 (838)
Q Consensus 492 ~~l~g 496 (838)
..+++
T Consensus 408 ~~i~~ 412 (432)
T d1qksa2 408 HVIKD 412 (432)
T ss_dssp EEECC
T ss_pred eEecC
Confidence 65554
No 40
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.61 E-value=7.4e-15 Score=154.35 Aligned_cols=283 Identities=8% Similarity=0.002 Sum_probs=157.3
Q ss_pred CEEEEEeCCCcEEEEECCCCccCCCCCcceeEEecc--ccccEEEEEEecCCC-E-EEeeCCCcEEEEECCCcceeeecC
Q 003217 204 GVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQA--HRGPVLSLCISSYGD-L-WSGSEGGGIKIWPWEAIEKALSLK 279 (838)
Q Consensus 204 ~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~g--H~~~V~slafs~dG~-L-~SgS~DgtIrvWd~~~~~~~~~~~ 279 (838)
+++++++.|++|++||+.++ +.+.++.. +...+.+++|+|||+ | ++++.|+.|++||+.+++...++.
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~--------~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~ 73 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKM--------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRID 73 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT--------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred eEEEEEcCCCEEEEEECCCC--------eEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEe
Confidence 47899999999999999987 55666643 445688999999998 5 578899999999998865433322
Q ss_pred CCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-------------CCcEEEEeccCccEEE
Q 003217 280 PEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-------------FLSFALWDARTRELLK 346 (838)
Q Consensus 280 ~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-------------~~tI~lWD~~tg~~l~ 346 (838)
....... ......+++++++..++.+. ...+.+||..+++++.
T Consensus 74 ~~~~~~~------------------------~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 129 (337)
T d1pbyb_ 74 LSTPEER------------------------VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK 129 (337)
T ss_dssp CCBTTEE------------------------EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE
T ss_pred cCCCccc------------------------ccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEE
Confidence 1100000 00111244455555554442 3468899999999988
Q ss_pred EEecCCceEEeeecccCccccc--ccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCc--e
Q 003217 347 VFNIDGQIENRVDMSLLPDFAM--EDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRR--T 422 (838)
Q Consensus 347 ~l~~~~~~~~~~~~s~~~~~~~--~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~--v 422 (838)
.+.....+ ..+.+++.....+ ..+.. ++... ..+...++.... .........++.. ++.. ...... .
T Consensus 130 ~~~~~~~~-~~~~~s~dg~~l~~~~~~~~--~~d~~-~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~---~~~~~~~~~ 200 (337)
T d1pbyb_ 130 AFEAPRQI-TMLAWARDGSKLYGLGRDLH--VMDPE-AGTLVEDKPIQS-WEAETYAQPDVLA-VWNQ---HESSGVMAT 200 (337)
T ss_dssp EEECCSSC-CCEEECTTSSCEEEESSSEE--EEETT-TTEEEEEECSTT-TTTTTBCCCBCCC-CCCC---CTTTTEEEE
T ss_pred eccccCCc-eEEEEcCCCCEEEEEcCCcc--eeeee-cCcEEEEeecCC-ccccceecCCcce-eecc---ccccceeee
Confidence 87654432 2233333322211 11111 01000 000000000000 0000000000000 0000 000000 1
Q ss_pred EEEE-EcCCCcEEEEECCCeEEEEcC-CCCeeeE-eecCCccEEEEEE--cCCEEEEEeeCCeEEEEeCC-Ccccccccc
Q 003217 423 EALT-TSIDGMIWTGGANGLLLQWDP-NGNRLQD-FQYLPFAVQCLCT--FGSQIWVGYMNGIVQVLDLE-GNLLGGWVA 496 (838)
Q Consensus 423 ~ala-~S~dg~l~Sgs~DgtIrlWD~-~g~~l~t-l~~H~~~V~sls~--dG~~LasGs~DgtIrlWD~~-g~~i~~l~g 496 (838)
.... .........++.++.+.+||. +++.... +..|...+.++.. ++.+++++ ++.|++||++ ++++..+ .
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~~~~~~~-~ 277 (337)
T d1pbyb_ 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV-P 277 (337)
T ss_dssp EEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEE-E
T ss_pred eeeeeeeccceeeecccCccEEEEEcCCCcEEEEEecCCCcceEEEEecccceEEEEc--cccEEEEECCCCcEEEEE-c
Confidence 1111 112222333444567999999 6765543 5556666666654 56677664 6899999998 5666655 3
Q ss_pred cccCEEEEE--eCCCEEEEEcCCCCeeeeecCCCCC
Q 003217 497 HSSPVIKMA--VGAGYIFTLANHGGIRGWNVTSPGP 530 (838)
Q Consensus 497 H~~~V~sla--~dg~~l~S~S~DgtIrlWdl~s~~~ 530 (838)
|...+.+|+ +||+++++++.|++|++||+.+...
T Consensus 278 ~~~~~~~~~~s~dG~~l~v~~~~~~i~v~D~~t~~~ 313 (337)
T d1pbyb_ 278 LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp CSSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcE
Confidence 556677777 4899999999999999999877543
No 41
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]}
Probab=99.60 E-value=2.7e-15 Score=158.42 Aligned_cols=289 Identities=7% Similarity=-0.107 Sum_probs=158.4
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEec-cccccEEEEEEecCCC-E-EEeeCCCcEEEEECCCcc
Q 003217 197 MVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQ-AHRGPVLSLCISSYGD-L-WSGSEGGGIKIWPWEAIE 273 (838)
Q Consensus 197 la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~-gH~~~V~slafs~dG~-L-~SgS~DgtIrvWd~~~~~ 273 (838)
+++++++++|++++.|++|.+||+.++ +.+.+++ .|...+.+|+|+|||+ | ++++.+++|++||+.+++
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~--------~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~ 73 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASD--------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 73 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTT--------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCC--------CEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCe
Confidence 467899999999999999999999997 6667665 4666788999999998 4 678899999999998764
Q ss_pred eeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-------------CCcEEEEecc
Q 003217 274 KALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-------------FLSFALWDAR 340 (838)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-------------~~tI~lWD~~ 340 (838)
............. . ......+++++++..++.++ +..+.+||..
T Consensus 74 ~~~~~~~~~~~~~-------------------~----~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~ 130 (346)
T d1jmxb_ 74 NTFHANLSSVPGE-------------------V----GRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTA 130 (346)
T ss_dssp EEEEEESCCSTTE-------------------E----EECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGG
T ss_pred eeeeecccccccc-------------------c----CCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecc
Confidence 3322211100000 0 00112244555666555442 3468889988
Q ss_pred CccEEEEEecC--CceEEeeecccCcccc-cccceeeEEEecCCCCcceee---------eeEeecCcceeeec-CCcEE
Q 003217 341 TRELLKVFNID--GQIENRVDMSLLPDFA-MEDEFKTKIVTSSKKDKAQSS---------FGFFQRSRNAIMGA-ADAVR 407 (838)
Q Consensus 341 tg~~l~~l~~~--~~~~~~~~~s~~~~~~-~~~~~~~~~~s~~~~~~~~~s---------~~~~~~~~~~~~g~-~~~v~ 407 (838)
+++....+..+ +........+...... ...+.. ++... ..+.... +.+.+.+...+... ..+..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (346)
T d1jmxb_ 131 DGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIY--KMDVK-TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEF 207 (346)
T ss_dssp GGGGBCCSEEEECCSSCCCEEECTTSCEEEESSSEE--EECTT-TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEE
T ss_pred cceeeeEEEeeeccCceEEEEecCCCEEEEeCCcce--EEEcc-CCCEEEEEecCCCccceEEeccccEEEEEecCCCce
Confidence 87654332211 0000000011100000 000000 00000 0000000 00111111111000 00000
Q ss_pred EEeccCccccCCCceEEEEEcCCCc-EEEEECCCeEEEEcC-CCCee-eEeecCCccEEEEEE--cCCEEEEEeeCCeEE
Q 003217 408 RVAAKGGFGDDNRRTEALTTSIDGM-IWTGGANGLLLQWDP-NGNRL-QDFQYLPFAVQCLCT--FGSQIWVGYMNGIVQ 482 (838)
Q Consensus 408 ~v~~~g~~~~~~~~v~ala~S~dg~-l~Sgs~DgtIrlWD~-~g~~l-~tl~~H~~~V~sls~--dG~~LasGs~DgtIr 482 (838)
.+. .....+.++.. +.++..++.+.+||. ++... ..+..|...+.++.. ++.+++++. ++.|+
T Consensus 208 ~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~ 275 (346)
T d1jmxb_ 208 SML-----------YTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLA 275 (346)
T ss_dssp EEE-----------EEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-ESEEE
T ss_pred Eee-----------eeeeeeccCceeEeeccCCceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEec-CCeEE
Confidence 000 00111222222 455666778999999 56543 445667877777654 566777655 46899
Q ss_pred EEeCC-CcccccccccccCEEEEE--eCCCEEEEEcCCCCeeeeecCCCCCCc
Q 003217 483 VLDLE-GNLLGGWVAHSSPVIKMA--VGAGYIFTLANHGGIRGWNVTSPGPLD 532 (838)
Q Consensus 483 lWD~~-g~~i~~l~gH~~~V~sla--~dg~~l~S~S~DgtIrlWdl~s~~~~d 532 (838)
+||+. ++++.... +...+.+++ +||+++++++.|++|++||+.+...+.
T Consensus 276 v~d~~~~~~~~~~~-~~~~~~~va~s~DG~~l~v~~~d~~v~v~D~~t~~~i~ 327 (346)
T d1jmxb_ 276 KYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVK 327 (346)
T ss_dssp EEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEE
T ss_pred EEECCCCcEEEEEc-CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECccCCEEE
Confidence 99987 66666554 334577776 589999999999999999987754443
No 42
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.52 E-value=7.4e-13 Score=140.91 Aligned_cols=278 Identities=9% Similarity=-0.009 Sum_probs=159.7
Q ss_pred EEEcCCCCEEEEEe-----CCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEE----------eeC
Q 003217 197 MVGDEASGVVWSGH-----RDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWS----------GSE 260 (838)
Q Consensus 197 la~s~dg~~LaSGs-----~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~S----------gS~ 260 (838)
.+.+|||++++... .+++|.+||..++ +.+.++..+..+ .++|||||+ |+. ++.
T Consensus 7 ~a~spdg~~~~v~~~~~~~~~~~v~v~D~~tg--------~~~~~~~~g~~~--~~a~SpDg~~l~v~~~~~~~~~~g~~ 76 (355)
T d2bbkh_ 7 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG--------RVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGER 76 (355)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT--------EEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEE
T ss_pred EeeCCCCCEEEEEecccCCCcCeEEEEECCCC--------cEEEEEECCCCC--ceEEcCCCCEEEEEeCCCccccccCC
Confidence 35578999988753 4668999999997 566677666555 799999998 653 345
Q ss_pred CCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC---CCcEEEE
Q 003217 261 GGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG---FLSFALW 337 (838)
Q Consensus 261 DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s---~~tI~lW 337 (838)
|+.|++||+.+++....+...... ...+ ......+++++++..++.++ +..+.+|
T Consensus 77 d~~v~v~D~~t~~~~~~~~~~~~~------------------~~~~----~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~ 134 (355)
T d2bbkh_ 77 TDYVEVFDPVTLLPTADIELPDAP------------------RFLV----GTYPWMTSLTPDGKTLLFYQFSPAPAVGVV 134 (355)
T ss_dssp EEEEEEECTTTCCEEEEEEETTCC------------------CCCB----SCCGGGEEECTTSSEEEEEECSSSCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEecCCcc------------------eeec----CCCCceEEEecCCCeeEEecCCCCceeeee
Confidence 889999999876533221110000 0000 01122355667777665543 3578899
Q ss_pred eccCccEEEEEecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeec-CCc-EEEEeccCcc
Q 003217 338 DARTRELLKVFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGA-ADA-VRRVAAKGGF 415 (838)
Q Consensus 338 D~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~-~~~-v~~v~~~g~~ 415 (838)
|..+++.+.++.........+... ...+.+.+++...++.. ..+ +.........
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~dg~~~~v~~~~~~~~~~~~~~~~~ 190 (355)
T d2bbkh_ 135 DLEGKAFKRMLDVPDCYHIFPTAP------------------------DTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH 190 (355)
T ss_dssp ETTTTEEEEEEECCSEEEEEEEET------------------------TEEEEEETTSCEEEEECCSSSCCEEEECCCCS
T ss_pred ecCCCcEeeEEecCCcceEeecCC------------------------cceEEEcCCCCEEEEEecCCCeEEEEeccccc
Confidence 999999988776543221100000 00112222222212111 111 1111110001
Q ss_pred ccCCCceEEEEE-cCCCcEEEEECCCeEEEEcCC-CC--eeeEeecCC------------ccEEEEEEcCCEEEEEeeC-
Q 003217 416 GDDNRRTEALTT-SIDGMIWTGGANGLLLQWDPN-GN--RLQDFQYLP------------FAVQCLCTFGSQIWVGYMN- 478 (838)
Q Consensus 416 ~~~~~~v~ala~-S~dg~l~Sgs~DgtIrlWD~~-g~--~l~tl~~H~------------~~V~sls~dG~~LasGs~D- 478 (838)
..+...+...++ .+++.++.++.++.+.+|+.. ++ ++.....|. .....+++++.+++....+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~ 270 (355)
T d2bbkh_ 191 PEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR 270 (355)
T ss_dssp CTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred ceecceeeeccccCCCCeEEEecCCCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccC
Confidence 112222233333 455568888999999999994 43 222222221 2234556688887776544
Q ss_pred ---------CeEEEEeCC-CcccccccccccCEEEEE--eCCC--EEEEEcCCCCeeeeecCCCCCC
Q 003217 479 ---------GIVQVLDLE-GNLLGGWVAHSSPVIKMA--VGAG--YIFTLANHGGIRGWNVTSPGPL 531 (838)
Q Consensus 479 ---------gtIrlWD~~-g~~i~~l~gH~~~V~sla--~dg~--~l~S~S~DgtIrlWdl~s~~~~ 531 (838)
..|.+||+. ++.+..+..+ ..+.+++ +||+ .+++++.|++|++||+++...+
T Consensus 271 ~~~~~~~~~~~v~v~d~~t~~~~~~~~~~-~~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~ 336 (355)
T d2bbkh_ 271 DEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEEL 336 (355)
T ss_dssp CTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEE
T ss_pred CceeecCCCCeEEEEeCCCCcEEEEecCC-CCEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEE
Confidence 479999987 6777766543 4466766 5777 3568889999999998876543
No 43
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]}
Probab=99.52 E-value=2.5e-12 Score=132.67 Aligned_cols=230 Identities=11% Similarity=0.124 Sum_probs=149.1
Q ss_pred EEEe--cCCEEEEe--cCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEE-EEeC
Q 003217 137 TIVC--TEEQLWAG--GENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVW-SGHR 211 (838)
Q Consensus 137 ~l~~--~~~~l~~g--~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~La-SGs~ 211 (838)
.++. +++.||++ .++.|++||+.+...... +.....+..++++++++.++ ++..
T Consensus 36 ~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (301)
T d1l0qa2 36 GAVISPDGTKVYVANAHSNDVSIIDTATNNVIAT---------------------VPAGSSPQGVAVSPDGKQVYVTNMA 94 (301)
T ss_dssp EEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEE---------------------EECSSSEEEEEECTTSSEEEEEETT
T ss_pred EEEEeCCCCEEEEEECCCCEEEEEECCCCceeee---------------------eeccccccccccccccccccccccc
Confidence 4444 45677753 478999999987543211 11123567899999998655 5567
Q ss_pred CCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-E-EEeeCCCcEEEEECCCcceeeecCCCceeeeEEE
Q 003217 212 DGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-L-WSGSEGGGIKIWPWEAIEKALSLKPEERHTAALI 289 (838)
Q Consensus 212 DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L-~SgS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~ 289 (838)
++.+++|+..++ +....+.. ...+.+++|+|||. + ++++.|+++++|+..+......+..
T Consensus 95 ~~~~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 156 (301)
T d1l0qa2 95 SSTLSVIDTTSN--------TVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV--------- 156 (301)
T ss_dssp TTEEEEEETTTT--------EEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC---------
T ss_pred cceeeecccccc--------eeeeeccc-cccceEEEeecCCCeeeeeeccccceeeeeccccceeeeccc---------
Confidence 778999999886 44454444 45678899999998 4 5788899999999976433221110
Q ss_pred EeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeCC--CcEEEEeccCccEEEEEecCCceEEeeecccCcccc
Q 003217 290 VERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAGF--LSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFA 367 (838)
Q Consensus 290 ~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s~--~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~ 367 (838)
......++..+++..++.+.. ..+.+|+....+....+..+.
T Consensus 157 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 200 (301)
T d1l0qa2 157 ---------------------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA--------------- 200 (301)
T ss_dssp ---------------------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---------------
T ss_pred ---------------------CCCceEEEeeccccceeeecccccccccccccceeeeecccccC---------------
Confidence 123455666667776666542 456677766655433332111
Q ss_pred cccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCceEEEEEcCCCc-EEEEE---CCCeEE
Q 003217 368 MEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRRTEALTTSIDGM-IWTGG---ANGLLL 443 (838)
Q Consensus 368 ~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~v~ala~S~dg~-l~Sgs---~DgtIr 443 (838)
.+..+++++++. ++.++ .+++|+
T Consensus 201 -----------------------------------------------------~~~~~~~~~~g~~~~v~~~~~~~~~v~ 227 (301)
T d1l0qa2 201 -----------------------------------------------------APSGIAVNPEGTKAYVTNVDKYFNTVS 227 (301)
T ss_dssp -----------------------------------------------------EEEEEEECTTSSEEEEEEECSSCCEEE
T ss_pred -----------------------------------------------------Ccceeeccccccccccccccceeeeee
Confidence 122345666665 43333 346899
Q ss_pred EEcC-CCCeeeEeecCCccEEEEE--EcCCEEE-EEeeCCeEEEEeCC-Cccccccc
Q 003217 444 QWDP-NGNRLQDFQYLPFAVQCLC--TFGSQIW-VGYMNGIVQVLDLE-GNLLGGWV 495 (838)
Q Consensus 444 lWD~-~g~~l~tl~~H~~~V~sls--~dG~~La-sGs~DgtIrlWD~~-g~~i~~l~ 495 (838)
+||+ +++++.++..+. .+.+++ +||++|+ +++.|++|++||++ ++++.++.
T Consensus 228 v~D~~t~~~~~~~~~~~-~~~~va~spdg~~l~va~~~~~~i~v~D~~t~~~~~~~~ 283 (301)
T d1l0qa2 228 MIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283 (301)
T ss_dssp EEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eeecCCCeEEEEEcCCC-CEEEEEEeCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence 9999 788888876544 467765 4889875 66679999999987 67766653
No 44
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.51 E-value=5.5e-12 Score=135.33 Aligned_cols=275 Identities=7% Similarity=-0.109 Sum_probs=155.8
Q ss_pred CCCeEEEEEcCCCCEEEEE-----eCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEe------
Q 003217 191 VSSVMCMVGDEASGVVWSG-----HRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSG------ 258 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSG-----s~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~Sg------ 258 (838)
.+++.+++++|||+.++.. +.++.+.+||.+++ +.+.++.+|..+ .++|||||+ |+++
T Consensus 20 ~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg--------~~~~~~~~~~~~--~~a~SpDG~~l~va~~~~~~ 89 (373)
T d2madh_ 20 DGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSG--------SILGHVNGGFLP--NPVAAHSGSEFALASTSFSR 89 (373)
T ss_pred CCCccccccCCCCCEEEEEcccccCCCceEEEEECCCC--------CEEEEEeCCCCc--cEEEcCCCCEEEEEeecCCc
Confidence 6789999999999998864 23457889998887 566677776654 799999998 5554
Q ss_pred ----eCCCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEE--EEeC-C
Q 003217 259 ----SEGGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKV--WSAG-F 331 (838)
Q Consensus 259 ----S~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V--~s~s-~ 331 (838)
+.+++|++||+.+++.............. . ......+++++++..+ +... +
T Consensus 90 ~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~--------------------~--~~~~~~~~~s~dg~~~~v~~~~~~ 147 (373)
T d2madh_ 90 IAKGKRTDYVEVFDPVTFLPIADIELPDAPRFD--------------------V--GPYSWMNANTPNNADLLFFQFAAG 147 (373)
T ss_pred ccccccceEEEEEECCCCcEEEEEecCCcceeE--------------------e--ccCCCcEEEEeCCCcEEEEEEcCC
Confidence 45788999999876543222211111000 0 1111223344444433 3322 3
Q ss_pred CcEEEEeccCccEEEEEecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEec
Q 003217 332 LSFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAA 411 (838)
Q Consensus 332 ~tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~ 411 (838)
..+.+|+..+++.+......... .+++..... .+....++...++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~----~~s~~g~~~------------------------------~v~~~~dg~~~~~~ 193 (373)
T d2madh_ 148 PAVGLVVQGGSSDDQLLSSPTCY----HIHPGAPST------------------------------FYLLCAQGGLAKTD 193 (373)
T ss_pred CceEEeeccCCeEEEEeccceeE----EEecCCCcE------------------------------EEEEcCCCeEEEEE
Confidence 46788888887765544322111 111111100 01111111111110
Q ss_pred -----------cCc-cccCCCceEEEEEcCCCcEEEEECCCeEEEEcCC-CCe--eeEeecCCcc------------EEE
Q 003217 412 -----------KGG-FGDDNRRTEALTTSIDGMIWTGGANGLLLQWDPN-GNR--LQDFQYLPFA------------VQC 464 (838)
Q Consensus 412 -----------~g~-~~~~~~~v~ala~S~dg~l~Sgs~DgtIrlWD~~-g~~--l~tl~~H~~~------------V~s 464 (838)
... ..........+.+++++.++..+.++++.+|+.. +.. +..+..+... ..+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (373)
T d2madh_ 194 HAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVA 273 (373)
T ss_pred cCCceeeEEEeeeccccCccceeeeEEECCCceEEEecCCceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeE
Confidence 000 0111122334567777777777788889999984 322 2222222111 112
Q ss_pred EEEcCC----------EEEEEeeCCeEEEEeCC-CcccccccccccCEEEEEe--CCCE--EEEEcCCCCeeeeecCCCC
Q 003217 465 LCTFGS----------QIWVGYMNGIVQVLDLE-GNLLGGWVAHSSPVIKMAV--GAGY--IFTLANHGGIRGWNVTSPG 529 (838)
Q Consensus 465 ls~dG~----------~LasGs~DgtIrlWD~~-g~~i~~l~gH~~~V~sla~--dg~~--l~S~S~DgtIrlWdl~s~~ 529 (838)
+++++. .+++...++.|.+||+. ++.+..+. |...+.++++ ||+. +++++.|++|++||+.+..
T Consensus 274 ~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~ 352 (373)
T d2madh_ 274 YLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGD 352 (373)
T ss_pred EecCCCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec-CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCC
Confidence 233343 44556667899999987 66666553 5566777774 7874 4689999999999998765
Q ss_pred CCc
Q 003217 530 PLD 532 (838)
Q Consensus 530 ~~d 532 (838)
.+.
T Consensus 353 ~~~ 355 (373)
T d2madh_ 353 QDQ 355 (373)
T ss_pred EEE
Confidence 543
No 45
>d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]}
Probab=99.47 E-value=2.1e-11 Score=130.72 Aligned_cols=294 Identities=10% Similarity=-0.064 Sum_probs=156.3
Q ss_pred ecCCEEEEe------cCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEe---
Q 003217 140 CTEEQLWAG------GENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGH--- 210 (838)
Q Consensus 140 ~~~~~l~~g------~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs--- 210 (838)
.+++++|+. .++.|.+||.++.+.... +. .+....++|+|||++|++++
T Consensus 30 pdg~~~~~~~~~~~~~~~~v~v~D~~tg~~~~~---------------------~~-~~~~~~~a~SpDG~~l~va~~~~ 87 (373)
T d2madh_ 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGH---------------------VN-GGFLPNPVAAHSGSEFALASTSF 87 (373)
T ss_pred CCCCEEEEEcccccCCCceEEEEECCCCCEEEE---------------------Ee-CCCCccEEEcCCCCEEEEEeecC
Confidence 456677753 245788999876543321 12 22233689999999999875
Q ss_pred -------CCCcEEEEECCCCccCCCCCcceeEEeccccccE-------EEEEEecCCC-E--EEeeCCCcEEEEECCCcc
Q 003217 211 -------RDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPV-------LSLCISSYGD-L--WSGSEGGGIKIWPWEAIE 273 (838)
Q Consensus 211 -------~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V-------~slafs~dG~-L--~SgS~DgtIrvWd~~~~~ 273 (838)
.|+.|++||..++ +....+..|.... ..++|++||+ + +....++.+.+|+..+.+
T Consensus 88 ~~~~~~~~~~~v~v~D~~t~--------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~ 159 (373)
T d2madh_ 88 SRIAKGKRTDYVEVFDPVTF--------LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVVQGGSS 159 (373)
T ss_pred CcccccccceEEEEEECCCC--------cEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEEcCCCceEEeeccCCe
Confidence 4678999999987 5555555555443 4578889887 3 344556788888875532
Q ss_pred eeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEE--EEeCCCcEEEEeccCccEEEEEecC
Q 003217 274 KALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKV--WSAGFLSFALWDARTRELLKVFNID 351 (838)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V--~s~s~~tI~lWD~~tg~~l~~l~~~ 351 (838)
.... .....++++.+++..+ ....++++.+||..+++........
T Consensus 160 ~~~~---------------------------------~~~~~~~~~s~~g~~~~v~~~~dg~~~~~~~~~~~~~~~~~~~ 206 (373)
T d2madh_ 160 DDQL---------------------------------LSSPTCYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGA 206 (373)
T ss_pred EEEE---------------------------------eccceeEEEecCCCcEEEEEcCCCeEEEEEcCCceeeEEEeee
Confidence 1100 0112233344444433 2334678999999998887665432
Q ss_pred CceE------EeeecccCccccc-ccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEecc-Cc---cc-cCC
Q 003217 352 GQIE------NRVDMSLLPDFAM-EDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAK-GG---FG-DDN 419 (838)
Q Consensus 352 ~~~~------~~~~~s~~~~~~~-~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~-g~---~~-~~~ 419 (838)
.... ............. ..+.++..+.... .... .. ..+............. +. .. ...
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~d 277 (373)
T d2madh_ 207 MLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISA-AGAT-NK-------APIDALSGGRKADTWRPGGWQQVAYLKS 277 (373)
T ss_pred ccccCccceeeeEEECCCceEEEecCCceEEEEEcCC-CeEE-EE-------EeeccccCcEEeeeeccCcceeeEEecC
Confidence 1100 0000000000000 0000000111000 0000 00 0000000001000000 00 00 000
Q ss_pred CceEEEEEcCCCcEEEEECCCeEEEEcC-CCCeeeEeecCCccEEEEE--EcCCE--EEEEeeCCeEEEEeCC-Cccccc
Q 003217 420 RRTEALTTSIDGMIWTGGANGLLLQWDP-NGNRLQDFQYLPFAVQCLC--TFGSQ--IWVGYMNGIVQVLDLE-GNLLGG 493 (838)
Q Consensus 420 ~~v~ala~S~dg~l~Sgs~DgtIrlWD~-~g~~l~tl~~H~~~V~sls--~dG~~--LasGs~DgtIrlWD~~-g~~i~~ 493 (838)
.....+...++..+++...+++|.+||. +++.+..+. +...+.+++ +||++ +++++.|++|+|||++ |+.+++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~v~~~d~~t~~~~~~~~-~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~ 356 (373)
T d2madh_ 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCeEEEecCCCceEEeecCCCeEEEEECCCCcEEEEec-CCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEE
Confidence 1111122223334566777889999999 788888775 455677665 58884 3577889999999997 899999
Q ss_pred ccccccCEEEEEe
Q 003217 494 WVAHSSPVIKMAV 506 (838)
Q Consensus 494 l~gH~~~V~sla~ 506 (838)
+.+|......|+.
T Consensus 357 ~~~~g~~P~~l~~ 369 (373)
T d2madh_ 357 TVELGSGPQVLSV 369 (373)
T ss_pred ECCCCCCCcEEEE
Confidence 9887776666654
No 46
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.39 E-value=3.3e-11 Score=126.26 Aligned_cols=144 Identities=14% Similarity=0.215 Sum_probs=89.4
Q ss_pred ecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCccC
Q 003217 148 GGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGH-RDGRIMCWKMNARLLD 226 (838)
Q Consensus 148 g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs-~DGtIrvWd~~~g~~~ 226 (838)
+.|++|+|||+........ . ....+.+.|.+|+|+|||++|++++ .|+.|++|++...
T Consensus 11 ~~~~~I~v~~~~~~~~l~~-----------------~-~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~--- 69 (333)
T d1ri6a_ 11 PESQQIHVWNLNHEGALTL-----------------T-QVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPD--- 69 (333)
T ss_dssp GGGTEEEEEEECTTSCEEE-----------------E-EEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTT---
T ss_pred CCCCcEEEEEEcCCCCeEE-----------------E-EEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCC---
Confidence 3588999999864221110 1 1111256789999999999986555 5899999999875
Q ss_pred CCCCcceeEEec---cccccEEEEEEecCCC-EEEee-CCCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccce
Q 003217 227 SDDGFGEVLSWQ---AHRGPVLSLCISSYGD-LWSGS-EGGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHL 301 (838)
Q Consensus 227 ~~~~~~~~~~l~---gH~~~V~slafs~dG~-L~SgS-~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~ 301 (838)
....++. .+...+..|+|+|||+ |++++ .+++|++|+........... ...+
T Consensus 70 -----~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~-----------------~~~~- 126 (333)
T d1ri6a_ 70 -----DGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVD-----------------VVEG- 126 (333)
T ss_dssp -----TCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEE-----------------EECC-
T ss_pred -----CCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccccccceeccc-----------------ccCC-
Confidence 2222222 2345577899999998 66665 57899999875532111100 0000
Q ss_pred eccceeeeecCCeEEEEEcCCCCEEEEeCC--CcEEEEeccCccE
Q 003217 302 SVNGFSSILTSDIKNLLSDHSRAKVWSAGF--LSFALWDARTREL 344 (838)
Q Consensus 302 ~~~~~~~~~s~~v~~las~~~~~~V~s~s~--~tI~lWD~~tg~~ 344 (838)
...+..+.+++++..++.+.. ..|.+|+..+...
T Consensus 127 ---------~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~ 162 (333)
T d1ri6a_ 127 ---------LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH 162 (333)
T ss_dssp ---------CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred ---------CccceEEEeeecceeeeccccccceeeEEEeccCCc
Confidence 122334556677776666553 4688998876543
No 47
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.34 E-value=6.7e-11 Score=125.37 Aligned_cols=104 Identities=7% Similarity=-0.068 Sum_probs=70.6
Q ss_pred ecCCEEEEe------cCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEE----
Q 003217 140 CTEEQLWAG------GENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSG---- 209 (838)
Q Consensus 140 ~~~~~l~~g------~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSG---- 209 (838)
.++.++|+. .+++|.+||.++...... +. .+.+..++|||||++|+..
T Consensus 11 pdg~~~~v~~~~~~~~~~~v~v~D~~tg~~~~~---------------------~~-~g~~~~~a~SpDg~~l~v~~~~~ 68 (355)
T d2bbkh_ 11 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGM---------------------ID-GGFLPNPVVADDGSFIAHASTVF 68 (355)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEE---------------------EE-ECSSCEEEECTTSSCEEEEEEEE
T ss_pred CCCCEEEEEecccCCCcCeEEEEECCCCcEEEE---------------------EE-CCCCCceEEcCCCCEEEEEeCCC
Confidence 366677763 355799999987543321 22 2233468999999988864
Q ss_pred ------eCCCcEEEEECCCCccCCCCCcceeEEecccc-------ccEEEEEEecCCC-EE--EeeCCCcEEEEECCCcc
Q 003217 210 ------HRDGRIMCWKMNARLLDSDDGFGEVLSWQAHR-------GPVLSLCISSYGD-LW--SGSEGGGIKIWPWEAIE 273 (838)
Q Consensus 210 ------s~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~-------~~V~slafs~dG~-L~--SgS~DgtIrvWd~~~~~ 273 (838)
..|+.|++||+.++ +....+..|. .....++|+++|+ ++ +.+.+..+++|+..+++
T Consensus 69 ~~~~~g~~d~~v~v~D~~t~--------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~ 140 (355)
T d2bbkh_ 69 SRIARGERTDYVEVFDPVTL--------LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKA 140 (355)
T ss_dssp EETTEEEEEEEEEEECTTTC--------CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTE
T ss_pred ccccccCCCCEEEEEECCCC--------CEEEEEecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCc
Confidence 45889999999987 4444443222 1235679999998 44 45677899999997754
No 48
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]}
Probab=99.28 E-value=2.4e-10 Score=119.43 Aligned_cols=271 Identities=10% Similarity=0.083 Sum_probs=144.2
Q ss_pred EEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EE-EeeCCCcEEEEECCCcceeeecCCCc
Q 003217 205 VVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LW-SGSEGGGIKIWPWEAIEKALSLKPEE 282 (838)
Q Consensus 205 ~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~-SgS~DgtIrvWd~~~~~~~~~~~~~~ 282 (838)
.+++++.|++|++|+++... . ........|.+.|.+|+|||||+ |+ +++.|++|++|++......+....
T Consensus 6 v~v~~~~~~~I~v~~~~~~~-----~-l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~-- 77 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEG-----A-LTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAA-- 77 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTS-----C-EEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE--
T ss_pred EEEECCCCCcEEEEEEcCCC-----C-eEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEee--
Confidence 45788899999999997641 0 12233447889999999999998 64 666799999999976433222110
Q ss_pred eeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC--CCcEEEEeccCccEEEEEec--CCceEEee
Q 003217 283 RHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG--FLSFALWDARTRELLKVFNI--DGQIENRV 358 (838)
Q Consensus 283 ~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s--~~tI~lWD~~tg~~l~~l~~--~~~~~~~~ 358 (838)
+.. .......+++++++..|++++ +.++.+|+............ +......+
T Consensus 78 -----------------~~~-------~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v 133 (333)
T d1ri6a_ 78 -----------------ESA-------LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSA 133 (333)
T ss_dssp -----------------EEE-------CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCC
T ss_pred -----------------ecc-------cCCCceEEEEcCCCCEEeecccCCCceeeeccccccceecccccCCCccceEE
Confidence 000 012344578888888888775 35788998877665433221 11111111
Q ss_pred ecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCc-EEEEeccCccccCCCceEEEEEcCCCcE--EE
Q 003217 359 DMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADA-VRRVAAKGGFGDDNRRTEALTTSIDGMI--WT 435 (838)
Q Consensus 359 ~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~-v~~v~~~g~~~~~~~~v~ala~S~dg~l--~S 435 (838)
.+++.....+ .... .... +..+ ...... ...................+++++++.. ++
T Consensus 134 ~~s~d~~~~~--------~~~~-~~~~---i~~~-------~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~~~~~~~~ 194 (333)
T d1ri6a_ 134 NISPDNRTLW--------VPAL-KQDR---ICLF-------TVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCV 194 (333)
T ss_dssp EECTTSSEEE--------EEEG-GGTE---EEEE-------EECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEE
T ss_pred Eeeecceeee--------cccc-ccce---eeEE-------EeccCCcceeeeceeeeeecCCCccEEEEeccceeEEee
Confidence 2222211110 0000 0000 0000 000000 0000000001112234567889998874 34
Q ss_pred EECCCeEEEEcCC--CC---eeeEeec------CCccEE--EEEEcCCEEEEEe-eCCeEEEEeCC-Cccccccc---cc
Q 003217 436 GGANGLLLQWDPN--GN---RLQDFQY------LPFAVQ--CLCTFGSQIWVGY-MNGIVQVLDLE-GNLLGGWV---AH 497 (838)
Q Consensus 436 gs~DgtIrlWD~~--g~---~l~tl~~------H~~~V~--sls~dG~~LasGs-~DgtIrlWD~~-g~~i~~l~---gH 497 (838)
....+...+|+.. .. ...++.. ...... .+++||++++... .++++.+|++. ........ .+
T Consensus 195 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (333)
T d1ri6a_ 195 NELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT 274 (333)
T ss_dssp ETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC
T ss_pred ccccCceEEEeecccccceeeeeeeeeeecCCCccccceeEEEecccCceeeecccCCeEEEEEEcCCCCEEEEEEEeCC
Confidence 4456678888763 22 1222211 122333 3456888666554 57899999976 22222222 23
Q ss_pred ccCEEEEE--eCCCEEEEE-cCCCCeeeeecC
Q 003217 498 SSPVIKMA--VGAGYIFTL-ANHGGIRGWNVT 526 (838)
Q Consensus 498 ~~~V~sla--~dg~~l~S~-S~DgtIrlWdl~ 526 (838)
...+.+|+ +||++|+.+ +.+++|++|++.
T Consensus 275 ~~~p~~~a~spDGk~l~va~~~~~~v~v~~id 306 (333)
T d1ri6a_ 275 ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 306 (333)
T ss_dssp SSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCeeEEEEeCCCCEEEEEECCCCeEEEEEEE
Confidence 34455555 689987755 567899999763
No 49
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=99.09 E-value=7.7e-10 Score=119.02 Aligned_cols=282 Identities=10% Similarity=-0.084 Sum_probs=147.5
Q ss_pred CCCeEEEEEcCCCCEE---EEEeCCCcEE--EEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEE-------
Q 003217 191 VSSVMCMVGDEASGVV---WSGHRDGRIM--CWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWS------- 257 (838)
Q Consensus 191 ~~~V~~la~s~dg~~L---aSGs~DGtIr--vWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~S------- 257 (838)
.++...++..++++.. ++.+.+|+.+ +||..++ +.+....+|..+ .++|+|||+ |+.
T Consensus 19 ~g~~~~~a~~~~~~~~~v~~~~~~~g~~~~~~~d~~~~--------~~~~~~~~~~~~--~~a~spDg~~i~~~~~~~~~ 88 (368)
T d1mdah_ 19 DGSSCDHGPGAISRRSHITLPAYFAGTTENWVSCAGCG--------VTLGHSLGAFLS--LAVAGHSGSDFALASTSFAR 88 (368)
T ss_dssp CCCCBCCCCCCCTTEEEEEECTTTCSSEEEEEEETTTT--------EEEEEEEECTTC--EEEECTTSSCEEEEEEEETT
T ss_pred CCCccccccCCCCcceeEEeeccCCCcceEEEEeCCCC--------cEEEEEeCCCCC--cceECCCCCEEEEEcccCcc
Confidence 3455555667788753 3345667655 5577776 556666666655 589999998 654
Q ss_pred ---eeCCCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC--CC
Q 003217 258 ---GSEGGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG--FL 332 (838)
Q Consensus 258 ---gS~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s--~~ 332 (838)
|+.|++|++||..+++....+........ .. -.....+++++++..++.+. ++
T Consensus 89 ~~~g~~d~~v~v~D~~t~~~~~~i~~p~~~~~---------------~~-------g~~p~~~a~SpDGk~l~va~~~~~ 146 (368)
T d1mdah_ 89 SAKGKRTDYVEVFDPVTFLPIADIELPDAPRF---------------SV-------GPRVHIIGNCASSACLLFFLFGSS 146 (368)
T ss_dssp TTSSSEEEEEEEECTTTCCEEEEEEETTSCSC---------------CB-------SCCTTSEEECTTSSCEEEEECSSS
T ss_pred ccccccCCeEEEEECCCCcEeeeecCCcccee---------------cc-------cCCccceEECCCCCEEEEEeCCCC
Confidence 34588999999987653322210000000 00 00112356677887776654 47
Q ss_pred cEEEEeccCccEEEEEecCCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeec-CCcEEEE-e
Q 003217 333 SFALWDARTRELLKVFNIDGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGA-ADAVRRV-A 410 (838)
Q Consensus 333 tI~lWD~~tg~~l~~l~~~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~-~~~v~~v-~ 410 (838)
++.+||+.++++++.+..+......+.... . .+.+.+++....+.. ..+.... .
T Consensus 147 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~----~--------------------~v~~~~Dg~~~~~~~~~~~~~~~~~ 202 (368)
T d1mdah_ 147 AAAGLSVPGASDDQLTKSASCFHIHPGAAA----T--------------------HYLGSCPASLAASDLAAAPAAAGIV 202 (368)
T ss_dssp CEEEEEETTTEEEEEEECSSCCCCEEEETT----E--------------------EECCCCTTSCEEEECCSSCCCCEEC
T ss_pred eEEEEECCCCcEeEEeeccCcceEccCCCc----e--------------------EEEEcCCCCEEEEEecCCceeeeee
Confidence 899999999999887755432110000000 0 000111111111100 0000000 0
Q ss_pred ccCccccCCCceEEEEEcCCCcEEEEECCCeEEEEcCCCCeee---E------------eecCCccEEEEEEcCCEEEEE
Q 003217 411 AKGGFGDDNRRTEALTTSIDGMIWTGGANGLLLQWDPNGNRLQ---D------------FQYLPFAVQCLCTFGSQIWVG 475 (838)
Q Consensus 411 ~~g~~~~~~~~v~ala~S~dg~l~Sgs~DgtIrlWD~~g~~l~---t------------l~~H~~~V~sls~dG~~LasG 475 (838)
....+..+...+..+.+.+++.++... ++.+.+++..+..+. . +..+......+++++..++..
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~a~~~~~~~~~v~ 281 (368)
T d1mdah_ 203 GAQCTGAQNCSSQAAQANYPGMLVWAV-ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMIL 281 (368)
T ss_dssp CCCSCTTSCBCSCCEEETTTTEEEECB-SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred ecccccccccceeecccccCcEEEEec-CCCEEEEeecCCceEEEeecccccceeeeeeecCCCceeEEEcCCCCEEEEE
Confidence 001111222233344555666543322 334555554221111 1 111222345667788877665
Q ss_pred eeC---------CeEEEEeCC-CcccccccccccCEEEEE--eCCCE--EEEEcCCCCeeeeecCCCCC
Q 003217 476 YMN---------GIVQVLDLE-GNLLGGWVAHSSPVIKMA--VGAGY--IFTLANHGGIRGWNVTSPGP 530 (838)
Q Consensus 476 s~D---------gtIrlWD~~-g~~i~~l~gH~~~V~sla--~dg~~--l~S~S~DgtIrlWdl~s~~~ 530 (838)
..+ ..|++||.. ++.+..+..+ ..+.+++ +||+. +++.+.|++|++||..+...
T Consensus 282 ~~~~~~~~~~~~~~v~v~D~~t~~~~~~~~~~-~~~~~~a~spDG~~~ly~s~~~~~~v~v~D~~tgk~ 349 (368)
T d1mdah_ 282 TVEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD 349 (368)
T ss_dssp EEECSSCTTSCEEEEEEEESSSCCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred ecCCCceeecCCceEEEEECCCCcEeEEecCC-CceeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCE
Confidence 432 369999987 6777776543 4566666 58863 45888999999999877543
No 50
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=99.00 E-value=9.6e-09 Score=114.07 Aligned_cols=107 Identities=12% Similarity=0.008 Sum_probs=78.8
Q ss_pred CCEEEEecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEe---------CC
Q 003217 142 EEQLWAGGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGH---------RD 212 (838)
Q Consensus 142 ~~~l~~g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs---------~D 212 (838)
+++++...|++|.+||+.+.....- .....|.. + ..+|.++.|||||+.|+.++ .+
T Consensus 27 d~~~~~~~~~~~~~~~~~t~~~~~~------------~~~~~~~~--~-~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~ 91 (470)
T d2bgra1 27 DHEYLYKQENNILVFNAEYGNSSVF------------LENSTFDE--F-GHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (470)
T ss_dssp SSEEEEESSSCEEEEETTTCCEEEE------------ECTTTTTT--S-SSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred CCEEEEEcCCcEEEEECCCCCEEEE------------Echhhhhh--c-cCccceeEECCCCCEEEEEECCcceeeeccC
Confidence 3455556688999999987653211 00111211 1 45799999999999999885 35
Q ss_pred CcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEECCCcc
Q 003217 213 GRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPWEAIE 273 (838)
Q Consensus 213 GtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~~~~~ 273 (838)
+.+.+||++++ ....+..|.+.+..+.|||||+ |+. ..|+.+.+|+..+++
T Consensus 92 ~~~~l~d~~~~---------~~~~l~~~~~~~~~~~~SPDG~~ia~-~~~~~l~~~~~~~g~ 143 (470)
T d2bgra1 92 ASYDIYDLNKR---------QLITEERIPNNTQWVTWSPVGHKLAY-VWNNDIYVKIEPNLP 143 (470)
T ss_dssp EEEEEEETTTT---------EECCSSCCCTTEEEEEECSSTTCEEE-EETTEEEEESSTTSC
T ss_pred ceEEEEECCCC---------cccccccCCccccccccccCcceeeE-eecccceEEECCCCc
Confidence 78899999985 4566888999999999999998 555 457789999988754
No 51
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]}
Probab=98.88 E-value=1.3e-08 Score=109.11 Aligned_cols=70 Identities=6% Similarity=-0.126 Sum_probs=52.2
Q ss_pred EEEEcCCCCEEEEEe----------CCCcEEEEECCCCccCCCCCcceeEEeccccc-------cEEEEEEecCCC-EEE
Q 003217 196 CMVGDEASGVVWSGH----------RDGRIMCWKMNARLLDSDDGFGEVLSWQAHRG-------PVLSLCISSYGD-LWS 257 (838)
Q Consensus 196 ~la~s~dg~~LaSGs----------~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~-------~V~slafs~dG~-L~S 257 (838)
.++++|||+.|+..+ .|++|++||..++ +....+..|.. ....++|||||+ |+.
T Consensus 69 ~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~--------~~~~~i~~p~~~~~~~g~~p~~~a~SpDGk~l~v 140 (368)
T d1mdah_ 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF--------LPIADIELPDAPRFSVGPRVHIIGNCASSACLLF 140 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC--------CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEE
T ss_pred cceECCCCCEEEEEcccCccccccccCCeEEEEECCCC--------cEeeeecCCccceecccCCccceEECCCCCEEEE
Confidence 478999999998754 4788999999987 45554443322 123689999998 665
Q ss_pred ee-CCCcEEEEECCCcc
Q 003217 258 GS-EGGGIKIWPWEAIE 273 (838)
Q Consensus 258 gS-~DgtIrvWd~~~~~ 273 (838)
++ .+++|.+||+.+++
T Consensus 141 a~~~~~~v~~~d~~~~~ 157 (368)
T d1mdah_ 141 FLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp EECSSSCEEEEEETTTE
T ss_pred EeCCCCeEEEEECCCCc
Confidence 54 67999999998754
No 52
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=98.43 E-value=5.3e-07 Score=98.95 Aligned_cols=100 Identities=14% Similarity=0.086 Sum_probs=63.7
Q ss_pred EEcCCCcEEEEECCCeEEEEcC-CCCeeeEeecCCccE-EEEEEcCCEEEE-EeeCCeEEEEeCCC--c-------cccc
Q 003217 426 TTSIDGMIWTGGANGLLLQWDP-NGNRLQDFQYLPFAV-QCLCTFGSQIWV-GYMNGIVQVLDLEG--N-------LLGG 493 (838)
Q Consensus 426 a~S~dg~l~Sgs~DgtIrlWD~-~g~~l~tl~~H~~~V-~sls~dG~~Las-Gs~DgtIrlWD~~g--~-------~i~~ 493 (838)
++++||+.+..+.++.+.+++. ..+.+.++..+.++- ..+++||+++++ |..+++|.|||++. + ...+
T Consensus 224 ~~~~dGk~~~v~~~~v~vvd~~~~~~v~~~IPvgksPhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~ 303 (441)
T d1qnia2 224 AAVKAGNFKTIGDSKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDT 303 (441)
T ss_dssp HHHHTTCCBCCTTCCCCEEECSSSCSSEEEECCBSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGG
T ss_pred EEecCCCEEEeCCCCcEEEEcccCCceEEEEeCCCCccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceE
Confidence 3567777544455778888887 456677766544431 245779998765 55799999999752 1 1233
Q ss_pred ccccccC---EEEEEeCCC--EEEEEcCCCCeeeeec
Q 003217 494 WVAHSSP---VIKMAVGAG--YIFTLANHGGIRGWNV 525 (838)
Q Consensus 494 l~gH~~~---V~sla~dg~--~l~S~S~DgtIrlWdl 525 (838)
+.++... ....++|++ ...|...|..|..|++
T Consensus 304 ~~~~~~~glgplh~~fd~~g~~yts~~~ds~v~kw~~ 340 (441)
T d1qnia2 304 IVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNI 340 (441)
T ss_dssp EEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEEEH
T ss_pred EEeecccccCcccceecCCceEEEcccccceEEEecc
Confidence 3333322 122345554 4568899999999997
No 53
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=98.35 E-value=7.5e-05 Score=77.17 Aligned_cols=69 Identities=17% Similarity=0.213 Sum_probs=54.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCCEE-EeeCCCcEEEEECCC
Q 003217 193 SVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGDLW-SGSEGGGIKIWPWEA 271 (838)
Q Consensus 193 ~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~L~-SgS~DgtIrvWd~~~ 271 (838)
.+..++++|||+++++...+++|..|+.++. ...+..+.+.+.+++|++||+|+ +...++.+.+|+...
T Consensus 29 ~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~----------~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~ 98 (302)
T d2p4oa1 29 FLENLASAPDGTIFVTNHEVGEIVSITPDGN----------QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVK 98 (302)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC----------EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred CcCCEEECCCCCEEEEeCCCCEEEEEeCCCC----------EEEEEcCCCCcceEEEcCCCCeEEEecCCceEEEEEecc
Confidence 5778999999999999999999988887653 23344456789999999999964 666778888887644
No 54
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=98.33 E-value=2.6e-05 Score=85.47 Aligned_cols=113 Identities=5% Similarity=0.007 Sum_probs=82.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeE-----EeccccccEEEEEEecCCC-EEEee---------C
Q 003217 196 CMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVL-----SWQAHRGPVLSLCISSYGD-LWSGS---------E 260 (838)
Q Consensus 196 ~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~-----~l~gH~~~V~slafs~dG~-L~SgS---------~ 260 (838)
.+.+.+++++++. .|+.|.+||+.++ ++.. ++..|...|.++.|||||+ |+.++ .
T Consensus 21 ~~~W~~d~~~~~~--~~~~~~~~~~~t~--------~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~ 90 (470)
T d2bgra1 21 SLRWISDHEYLYK--QENNILVFNAEYG--------NSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (470)
T ss_dssp CCEECSSSEEEEE--SSSCEEEEETTTC--------CEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred CCEeCCCCEEEEE--cCCcEEEEECCCC--------CEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeecc
Confidence 3667788888765 5889999999997 3333 3456678999999999998 66654 3
Q ss_pred CCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeCCCcEEEEecc
Q 003217 261 GGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAGFLSFALWDAR 340 (838)
Q Consensus 261 DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s~~tI~lWD~~ 340 (838)
++.+.|||+++++. ..+.. + ...+....++++|.+|+...+..+.+|+..
T Consensus 91 ~~~~~l~d~~~~~~-~~l~~-------------------~----------~~~~~~~~~SPDG~~ia~~~~~~l~~~~~~ 140 (470)
T d2bgra1 91 TASYDIYDLNKRQL-ITEER-------------------I----------PNNTQWVTWSPVGHKLAYVWNNDIYVKIEP 140 (470)
T ss_dssp EEEEEEEETTTTEE-CCSSC-------------------C----------CTTEEEEEECSSTTCEEEEETTEEEEESST
T ss_pred CceEEEEECCCCcc-ccccc-------------------C----------CccccccccccCcceeeEeecccceEEECC
Confidence 56788999977532 11111 1 234566778888988888888899999999
Q ss_pred CccEEEEE
Q 003217 341 TRELLKVF 348 (838)
Q Consensus 341 tg~~l~~l 348 (838)
+++..+..
T Consensus 141 ~g~~~~~t 148 (470)
T d2bgra1 141 NLPSYRIT 148 (470)
T ss_dssp TSCCEECC
T ss_pred CCceeeee
Confidence 99876543
No 55
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]}
Probab=98.33 E-value=1.9e-07 Score=102.52 Aligned_cols=54 Identities=6% Similarity=0.012 Sum_probs=40.8
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCccCCCCCcceeEEe-ccccccEEEEEEecCCC
Q 003217 193 SVMCMVGDEASGVVWSGH-RDGRIMCWKMNARLLDSDDGFGEVLSW-QAHRGPVLSLCISSYGD 254 (838)
Q Consensus 193 ~V~~la~s~dg~~LaSGs-~DGtIrvWd~~~g~~~~~~~~~~~~~l-~gH~~~V~slafs~dG~ 254 (838)
...+..++|||++|+... .+++|.+||+.+. +....+ ..+...+.+++|+|||+
T Consensus 73 ~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~--------k~~~ii~iP~g~gphgi~~spdg~ 128 (441)
T d1qnia2 73 HISMTDGRYDGKYLFINDKANTRVARIRLDIM--------KTDKITHIPNVQAIHGLRLQKVPK 128 (441)
T ss_dssp EEEEETTEEEEEEEEEEETTTTEEEEEETTTT--------EEEEEEECTTCCCEEEEEECCSSB
T ss_pred CcceecccCCCCEEEEEcCCCCEEEEEECCCC--------cEeeEEecCCCCCccceEEeccCC
Confidence 455566688999997665 6778999999986 343333 34667899999999997
No 56
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=98.25 E-value=0.0006 Score=69.25 Aligned_cols=108 Identities=8% Similarity=0.092 Sum_probs=74.2
Q ss_pred eEEEEEcCCCcEE-EEECCCeEEEEcCCCCeeeEee--cCCccEEEEEEc--CCEEEEEe-eCCeEEEEeCCCccccccc
Q 003217 422 TEALTTSIDGMIW-TGGANGLLLQWDPNGNRLQDFQ--YLPFAVQCLCTF--GSQIWVGY-MNGIVQVLDLEGNLLGGWV 495 (838)
Q Consensus 422 v~ala~S~dg~l~-Sgs~DgtIrlWD~~g~~l~tl~--~H~~~V~sls~d--G~~LasGs-~DgtIrlWD~~g~~i~~l~ 495 (838)
...++++++|.++ +....+.|+++|.+|+.+.++. ++......|+.| |+.+++-+ .++.|.+++.+|+++.++.
T Consensus 159 ~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~~~G~~~~~~~ 238 (279)
T d1q7fa_ 159 PNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALE 238 (279)
T ss_dssp EEEEEECSSSEEEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEE
T ss_pred cceeeeccceeEEeeeccccceeeeecCCceeeeecccccccCCcccccccCCeEEEEECCCCcEEEEECCCCCEEEEEe
Confidence 3456778888865 4445678999999999888874 344556777764 66444422 3557999999999877765
Q ss_pred ccc--cCEEEEE--eCCCEEEEEcCCCCeeeeecCCCCC
Q 003217 496 AHS--SPVIKMA--VGAGYIFTLANHGGIRGWNVTSPGP 530 (838)
Q Consensus 496 gH~--~~V~sla--~dg~~l~S~S~DgtIrlWdl~s~~~ 530 (838)
... ...+.|+ .||. ++.++.++.|++|......|
T Consensus 239 ~~~~~~~p~~vav~~dG~-l~V~~~n~~v~~fr~~~~~~ 276 (279)
T d1q7fa_ 239 SKVKHAQCFDVALMDDGS-VVLASKDYRLYIYRYVQLAP 276 (279)
T ss_dssp ESSCCSCEEEEEEETTTE-EEEEETTTEEEEEECSCCCC
T ss_pred CCCCCCCEeEEEEeCCCc-EEEEeCCCeEEEEEeeeecC
Confidence 432 3456666 4665 45556789999999766544
No 57
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
Probab=98.23 E-value=1.7e-06 Score=88.55 Aligned_cols=71 Identities=18% Similarity=0.293 Sum_probs=49.5
Q ss_pred cccCCCceeEEEEEEcCeEEEEEeccccCCcc------hHHHHHHHHHHHHHhcCcCCCCCcccccccCCCceeeecccC
Q 003217 672 RAIGNKGAVGLRVRVYDRIMCFVNCHFAAHLE------AVNRRNADFDHVYRTMTFCRPSNLCSAAAAGASSVVQMLRST 745 (838)
Q Consensus 672 ~~~gnKG~v~i~~~i~~~~~~Fv~~HLaa~~~------~~~~Rn~d~~~I~~~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 745 (838)
....++|++.+.+.+.+..|+++|+||.++.. ....|...++.+...+.=.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~~~~~~~~~~~~r~~q~~~~~~~~~~~----------------------- 176 (299)
T d2ddra1 120 DNLSNKGFVYTKIKKNDRFVHVIGTHLQAEDSMCGKTSPASVRTNQLKEIQDFIKNK----------------------- 176 (299)
T ss_dssp --CCCCEEEEEEEEETTEEEEEEEEECCCC-------CHHHHHHHHHHHHHHHHHHH-----------------------
T ss_pred ccccceeEEEEEEecCCeEEEEEEccccCCCCccchhhhHHHHHHHHHHHhhhhhhh-----------------------
Confidence 35678999999999999999999999998743 2344666666665544100
Q ss_pred CCCCCCcccCCCCcCcccEEEEeccceeeecC
Q 003217 746 NPLSGLTVEGVPELSEADMVIFLGDFNYRLDG 777 (838)
Q Consensus 746 ~~~~~~~~~~~~~~~~~d~vf~~GDlNyRi~~ 777 (838)
.....+.|+++||||.+-..
T Consensus 177 ------------~~~~~~~vi~~GDfN~~~~~ 196 (299)
T d2ddra1 177 ------------NIPNNEYVLIGGDMNVNKIN 196 (299)
T ss_dssp ------------TCCTTSCEEEEEECCCCCTT
T ss_pred ------------cccccceEEEEecCCCCccc
Confidence 01234579999999998654
No 58
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]}
Probab=98.20 E-value=1.9e-06 Score=87.99 Aligned_cols=48 Identities=13% Similarity=0.154 Sum_probs=36.2
Q ss_pred CcccCCCceeEEEEEEcCeEEEEEeccccCCcc------hHHHHHHHHHHHHHh
Q 003217 671 GRAIGNKGAVGLRVRVYDRIMCFVNCHFAAHLE------AVNRRNADFDHVYRT 718 (838)
Q Consensus 671 ~~~~gnKG~v~i~~~i~~~~~~Fv~~HLaa~~~------~~~~Rn~d~~~I~~~ 718 (838)
.....+||.+.+++.+.+..++|+|+||.++.. ....|..+++.+...
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~~~~~~~~~~~~r~~~~~~~~~~ 172 (293)
T d1zwxa1 119 ADRLSNKGFAYVKIMKNGKPYHIIGTHTQADDSLISKDTSRAIRAEQMQEIQTF 172 (293)
T ss_dssp GGGGBCCEEEEEEEEETTEEEEEEEEECCCCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccceEEEEEEecCCceEEEEEeeeeccCCccchhHHHHHHHHHHHHhhhh
Confidence 345678999999999999999999999988743 234466666665544
No 59
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=97.69 E-value=0.0073 Score=62.26 Aligned_cols=59 Identities=12% Similarity=0.102 Sum_probs=44.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCCEEEee
Q 003217 193 SVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGDLWSGS 259 (838)
Q Consensus 193 ~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~L~SgS 259 (838)
.+-.++||++|++.++-...++|..|+.+++ .....+.........|+|++||+|+.++
T Consensus 41 ~lEG~~~D~~G~Ly~~D~~~g~I~ri~p~g~--------~~~~~~~~~~~~p~gla~~~dG~l~va~ 99 (319)
T d2dg1a1 41 QLEGLNFDRQGQLFLLDVFEGNIFKINPETK--------EIKRPFVSHKANPAAIKIHKDGRLFVCY 99 (319)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTC--------CEEEEEECSSSSEEEEEECTTSCEEEEE
T ss_pred CcEeCEECCCCCEEEEECCCCEEEEEECCCC--------eEEEEEeCCCCCeeEEEECCCCCEEEEe
Confidence 3467899999998888889999999998875 2233334445667899999999976544
No 60
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]}
Probab=97.53 E-value=0.04 Score=56.42 Aligned_cols=55 Identities=9% Similarity=0.105 Sum_probs=39.8
Q ss_pred EEEEEcCCCcEEEEE-CCCeEEEEcCCCCeeeEeec------CCccEEEEEEc--CCEEEEEee
Q 003217 423 EALTTSIDGMIWTGG-ANGLLLQWDPNGNRLQDFQY------LPFAVQCLCTF--GSQIWVGYM 477 (838)
Q Consensus 423 ~ala~S~dg~l~Sgs-~DgtIrlWD~~g~~l~tl~~------H~~~V~sls~d--G~~LasGs~ 477 (838)
..++++.+|.||.+. .++.|.++|.+|+.+.++.. +...++|+++. +..+++.+.
T Consensus 231 dGl~vD~~G~l~Va~~~~g~V~~~~p~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~t~~ 294 (319)
T d2dg1a1 231 DSCCIDSDDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 294 (319)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred eeeeEcCCCCEEEEEcCCCEEEEECCCCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEEEEEcC
Confidence 357788999987665 57899999999998888763 34456787763 456665543
No 61
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.48 E-value=0.013 Score=58.21 Aligned_cols=104 Identities=11% Similarity=-0.003 Sum_probs=62.8
Q ss_pred EEEEEcCCCcEEEE-ECCCeEEEEcCCCCeeeEee-cCCccEEEEEEc--CCEEEEEeeCCeEEEEeCCCccccccc-cc
Q 003217 423 EALTTSIDGMIWTG-GANGLLLQWDPNGNRLQDFQ-YLPFAVQCLCTF--GSQIWVGYMNGIVQVLDLEGNLLGGWV-AH 497 (838)
Q Consensus 423 ~ala~S~dg~l~Sg-s~DgtIrlWD~~g~~l~tl~-~H~~~V~sls~d--G~~LasGs~DgtIrlWD~~g~~i~~l~-gH 497 (838)
..++++++|.++.+ ..++.|..+|.++....++. ........|+.| |...++-...+.|..++..+.....+. ..
T Consensus 143 ~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~~~~~~~~ 222 (260)
T d1rwia_ 143 DGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTG 222 (260)
T ss_dssp CEEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTTEEEEECTTCSCCEECCCCS
T ss_pred ceeeecCCCCEeeeccccccccccccccceeeeeeccccCCCccceeeeeeeeeeeecCCCEEEEEeCCCCeEEEEccCC
Confidence 45778888887554 45677999999765554443 344556777775 555555555788998988755433332 22
Q ss_pred ccCEEEEEe--CCCEEEEEcCCCCeeeeecCCC
Q 003217 498 SSPVIKMAV--GAGYIFTLANHGGIRGWNVTSP 528 (838)
Q Consensus 498 ~~~V~sla~--dg~~l~S~S~DgtIrlWdl~s~ 528 (838)
-....+|+. +|...++-..++.| +.+.+.
T Consensus 223 ~~~P~~i~~d~~g~l~vad~~~~rI--~~i~~~ 253 (260)
T d1rwia_ 223 LNTPLAVAVDSDRTVYVADRGNDRV--VKLTSL 253 (260)
T ss_dssp CCCEEEEEECTTCCEEEEEGGGTEE--EEECCC
T ss_pred CCCeEEEEEeCCCCEEEEECCCCEE--EEEeCC
Confidence 245567776 45555554555544 444443
No 62
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=97.48 E-value=0.033 Score=54.42 Aligned_cols=57 Identities=9% Similarity=-0.062 Sum_probs=41.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCC---cEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EE
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDG---RIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LW 256 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DG---tIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~ 256 (838)
...+..-+|||||+.||-..... .+.+.+..++ ....+..+.+.+....++|+|+ ++
T Consensus 38 ~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~spdg~~i~ 98 (269)
T d2hqsa1 38 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANG---------AVRQVASFPRHNGAPAFSPDGSKLA 98 (269)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC---------CEEEEECCSSCEEEEEECTTSSEEE
T ss_pred CCceeeeEECCCCCEEEEEEeeccCcceeeeecccC---------ceeEEeeeecccccceecCCCCeee
Confidence 55788899999999998655443 3445555553 3445556788889999999998 44
No 63
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=97.47 E-value=0.036 Score=56.22 Aligned_cols=225 Identities=13% Similarity=0.100 Sum_probs=117.0
Q ss_pred EEcC-CCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCCEEEeeCCCcEEEEECCCcceee
Q 003217 198 VGDE-ASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGDLWSGSEGGGIKIWPWEAIEKAL 276 (838)
Q Consensus 198 a~s~-dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~L~SgS~DgtIrvWd~~~~~~~~ 276 (838)
.+++ ++.+.|+=-..++|..||.+++. ...+. ....+.++++.++|.||.|+.+ .|.++|..+++...
T Consensus 24 ~wd~~~~~l~wvDi~~~~I~r~d~~~g~---------~~~~~-~~~~~~~i~~~~dg~l~va~~~-gl~~~d~~tg~~~~ 92 (295)
T d2ghsa1 24 TFDPASGTAWWFNILERELHELHLASGR---------KTVHA-LPFMGSALAKISDSKQLIASDD-GLFLRDTATGVLTL 92 (295)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEETTTTE---------EEEEE-CSSCEEEEEEEETTEEEEEETT-EEEEEETTTCCEEE
T ss_pred eEECCCCEEEEEECCCCEEEEEECCCCe---------EEEEE-CCCCcEEEEEecCCCEEEEEeC-ccEEeecccceeeE
Confidence 4665 56677887678899999998862 22221 2457889999999998877775 57888987654321
Q ss_pred ecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeCC------CcEEEEeccCccEEEEEec
Q 003217 277 SLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAGF------LSFALWDARTRELLKVFNI 350 (838)
Q Consensus 277 ~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s~------~tI~lWD~~tg~~l~~l~~ 350 (838)
-...+.. . +......+..+++| .+|.+.. ..-.+|.+..++....+..
T Consensus 93 l~~~~~~------------------~-------~~~~~nd~~vd~~G-~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~ 146 (295)
T d2ghsa1 93 HAELESD------------------L-------PGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVAKGKVTKLFAD 146 (295)
T ss_dssp EECSSTT------------------C-------TTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEETTEEEEEEEE
T ss_pred EeeeecC------------------C-------CcccceeeEECCCC-CEEEEeccccccccceeEeeecCCcEEEEeec
Confidence 1111000 0 01113344556555 4555531 1345666666765444321
Q ss_pred CCceEEeeecccCcccccccceeeEEEecCCCCcceeeeeEeecCcceeeecCCcEEEEeccCccccCCCceEEEEEcCC
Q 003217 351 DGQIENRVDMSLLPDFAMEDEFKTKIVTSSKKDKAQSSFGFFQRSRNAIMGAADAVRRVAAKGGFGDDNRRTEALTTSID 430 (838)
Q Consensus 351 ~~~~~~~~~~s~~~~~~~~~~~~~~~~s~~~~~~~~~s~~~~~~~~~~~~g~~~~v~~v~~~g~~~~~~~~v~ala~S~d 430 (838)
-. ..+.+.++..... +. +...... .+..+.+... .....+.. .+ .+ .+.+.......++++.+
T Consensus 147 ~~-~~Ng~~~s~d~~~-------l~-~~dt~~~-~I~~~~~d~~-~~~~~~~~-~~-~~----~~~~~~g~pdG~~vD~~ 209 (295)
T d2ghsa1 147 IS-IPNSICFSPDGTT-------GY-FVDTKVN-RLMRVPLDAR-TGLPTGKA-EV-FI----DSTGIKGGMDGSVCDAE 209 (295)
T ss_dssp ES-SEEEEEECTTSCE-------EE-EEETTTC-EEEEEEBCTT-TCCBSSCC-EE-EE----ECTTSSSEEEEEEECTT
T ss_pred cC-CcceeeecCCCce-------EE-Eeecccc-eeeEeeeccc-ccccccce-EE-Ee----ccCcccccccceEEcCC
Confidence 11 1111222221111 00 1111000 0000000000 00000000 00 00 01122334567888999
Q ss_pred CcEEEEE-CCCeEEEEcCCCCeeeEeecCCccEEEEEEc---CCEEEEEe
Q 003217 431 GMIWTGG-ANGLLLQWDPNGNRLQDFQYLPFAVQCLCTF---GSQIWVGY 476 (838)
Q Consensus 431 g~l~Sgs-~DgtIrlWD~~g~~l~tl~~H~~~V~sls~d---G~~LasGs 476 (838)
|.||.+. ..+.|..+|.+|+.+..+......++++++- .+.|++.+
T Consensus 210 GnlWva~~~~g~V~~~dp~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvTt 259 (295)
T d2ghsa1 210 GHIWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 259 (295)
T ss_dssp SCEEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred CCEEeeeeCCCceEEecCCCcEeeEecCCCCceEEEEEeCCCCCEEEEEE
Confidence 9998876 4567999999999998888766778888874 45666554
No 64
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=97.43 E-value=0.018 Score=59.13 Aligned_cols=105 Identities=5% Similarity=-0.050 Sum_probs=61.1
Q ss_pred EEEEcCCC-----cEEE-EECCCeEEEEcC--CCCee-----eEeec-CCccEEEEEEc--CCEEEEEeeCCeEEEEeCC
Q 003217 424 ALTTSIDG-----MIWT-GGANGLLLQWDP--NGNRL-----QDFQY-LPFAVQCLCTF--GSQIWVGYMNGIVQVLDLE 487 (838)
Q Consensus 424 ala~S~dg-----~l~S-gs~DgtIrlWD~--~g~~l-----~tl~~-H~~~V~sls~d--G~~LasGs~DgtIrlWD~~ 487 (838)
.+++++++ .|+. -+..+.|..+|+ .|... ..+.+ +....-.++.| |+..++....+.|.+||.+
T Consensus 176 Gi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~pdGiavD~~GnlyVa~~~~g~I~~~dp~ 255 (314)
T d1pjxa_ 176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred eeEECCCCCcceeEEEEEeecccceEEeeccCccccceeeEEEEccccccccceeeEEecCCcEEEEEcCCCEEEEEeCC
Confidence 45565554 3543 345677877776 33221 11211 11223356664 6543444457899999988
Q ss_pred -CcccccccccccCEEEEEe--CCC-EEEEEcCCCCeeeeecCCC
Q 003217 488 -GNLLGGWVAHSSPVIKMAV--GAG-YIFTLANHGGIRGWNVTSP 528 (838)
Q Consensus 488 -g~~i~~l~gH~~~V~sla~--dg~-~l~S~S~DgtIrlWdl~s~ 528 (838)
++.+..+..+...+.++++ |++ ..++.+.+++|...++..+
T Consensus 256 ~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~~~ 300 (314)
T d1pjxa_ 256 GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECCCC
Confidence 4566667777778888887 444 4467777776666555443
No 65
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]}
Probab=97.39 E-value=0.032 Score=57.08 Aligned_cols=65 Identities=12% Similarity=0.109 Sum_probs=48.0
Q ss_pred EEEEEcCCCcEEEEE-CCCeEEEEcCC-CCeeeEeecCCccEEEEEE--cCCEEEEEe-eCCeEEEEeCC
Q 003217 423 EALTTSIDGMIWTGG-ANGLLLQWDPN-GNRLQDFQYLPFAVQCLCT--FGSQIWVGY-MNGIVQVLDLE 487 (838)
Q Consensus 423 ~ala~S~dg~l~Sgs-~DgtIrlWD~~-g~~l~tl~~H~~~V~sls~--dG~~LasGs-~DgtIrlWD~~ 487 (838)
..++++.+|.||.+. ..+.|.+||.+ ++.+.++..+....+++++ |++.|++.+ ..+.|...|+.
T Consensus 229 dGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 229 DGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred eeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence 357788999987655 56789999995 5666677766677888877 566676654 56888888864
No 66
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=97.23 E-value=0.12 Score=51.19 Aligned_cols=65 Identities=9% Similarity=0.033 Sum_probs=46.3
Q ss_pred eEEEEEcCCCcEEEEE--CCCeEEEEcCCCCeeeEeecCC--ccEEEEEE--cCCEEEEEeeCCeEEEEeCC
Q 003217 422 TEALTTSIDGMIWTGG--ANGLLLQWDPNGNRLQDFQYLP--FAVQCLCT--FGSQIWVGYMNGIVQVLDLE 487 (838)
Q Consensus 422 v~ala~S~dg~l~Sgs--~DgtIrlWD~~g~~l~tl~~H~--~~V~sls~--dG~~LasGs~DgtIrlWD~~ 487 (838)
...|+++++|.|+.+. .++.|.+++.+|+.+.++.... .....|+. +| +|++++.++.|++|.-.
T Consensus 202 P~giavD~~G~i~Vad~~~~~~v~~f~~~G~~~~~~~~~~~~~~p~~vav~~dG-~l~V~~~n~~v~~fr~~ 272 (279)
T d1q7fa_ 202 PIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDG-SVVLASKDYRLYIYRYV 272 (279)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTT-EEEEEETTTEEEEEECS
T ss_pred CcccccccCCeEEEEECCCCcEEEEECCCCCEEEEEeCCCCCCCEeEEEEeCCC-cEEEEeCCCeEEEEEee
Confidence 3467888999977664 2447999999999888876432 24456655 55 56666789999999843
No 67
>d1wdua_ d.151.1.1 (A:) Endonuclease domain of TRAS1 retrotransposon (ORF2) {Silkworm (Bombyx mori) [TaxId: 7091]}
Probab=97.22 E-value=0.00021 Score=69.69 Aligned_cols=110 Identities=15% Similarity=0.100 Sum_probs=59.0
Q ss_pred eEEEEEEeCCCCCCcccccccccCCCCCceEEEEEeecccCccchhhhhhhhhhccCCCCcchhhHHHHHhhhcCCCCCE
Q 003217 554 ILAGTWNVGQGRASQDALISWLGSAASDVGIVVVGLQEVEMGAGFLAMSAAKETVGLEGSAVGHWWLDMIGKILDDGSTF 633 (838)
Q Consensus 554 i~~~twNv~~~~~~~~~l~~wl~~~~~~~di~vig~QE~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~~y 633 (838)
+-|.||||+..+.....|..++.. .++||++ |||.-.... .....+ .+..+
T Consensus 3 ~rV~~~Nv~~~~~~~~~l~~~i~~--~~~DIi~--lQE~~~~~~------------------------~~~~~~-~~~~~ 53 (228)
T d1wdua_ 3 YRVLQANLQRKKLATAELAIEAAT--RKAAIAL--IQEPYVGGA------------------------KSMKGF-RGVRV 53 (228)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHH--HTCSEEE--EESCCC------------------------------CCC-SSCEE
T ss_pred EEEEeeccCCChHHHHHHHHHHHh--cCCCEEE--EECCCcCCC------------------------Cccccc-cceEE
Confidence 467899999877666777777764 4567765 999632110 000111 01112
Q ss_pred EEEeeeecccEEEEEEEecCCcCccCceeeceeecccCcccCCCceeEEEEEEcCeEEEEEeccccCCcc
Q 003217 634 ERVGSRQLAGLLIAVWVRKNLKDYVGDVDVAAVPCGFGRAIGNKGAVGLRVRVYDRIMCFVNCHFAAHLE 703 (838)
Q Consensus 634 ~~v~s~~l~g~~l~vf~r~~~~~~i~~v~~~~v~~G~~~~~gnKG~v~i~~~i~~~~~~Fv~~HLaa~~~ 703 (838)
.......-+.....+++++... ...... .......+.+++......++++|+|+.+...
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-----~~~~~~~~~~~i~~~~~~i~v~~~y~~~~~~ 112 (228)
T d1wdua_ 54 FQSTAQGDGTVKAAIAVFDHDL------DVIQYP-----QLTTNNIVVVGIRTRAWEITLVSYYFEPDKP 112 (228)
T ss_dssp EECCCCTTCCCCEEEEECCSSC------EEEECT-----TTCCSSEEEEEEECSSCEEEEEEEECCTTSC
T ss_pred EeccCCCCCCcceEEEEEcccc------ceeccc-----CCCCCCEEEEEEEcCCccEEEEEEEeCCccc
Confidence 2222222222233444554322 111110 1124467778888888999999999987643
No 68
>d1vyba_ d.151.1.1 (A:) Endonuclease domain of LINE-1 reverse transcriptase homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.03 E-value=0.00075 Score=65.94 Aligned_cols=112 Identities=14% Similarity=0.151 Sum_probs=58.1
Q ss_pred eEEEEEEeCCCCC--CcccccccccCCCCCceEEEEEeecccCccchhhhhhhhhhccCCCCcchhhHHHHHhhhcCCCC
Q 003217 554 ILAGTWNVGQGRA--SQDALISWLGSAASDVGIVVVGLQEVEMGAGFLAMSAAKETVGLEGSAVGHWWLDMIGKILDDGS 631 (838)
Q Consensus 554 i~~~twNv~~~~~--~~~~l~~wl~~~~~~~di~vig~QE~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~l~~~~ 631 (838)
|-+.||||++-+- ....+.+||.. .+||| |+|||+-....-. .+ ... .....
T Consensus 6 ~kv~s~Nv~g~~~~~~~~~i~~~i~~--~~~DI--i~LQE~~~~~~~~----~~--~~~----------------~~~~~ 59 (236)
T d1vyba_ 6 ITILTLNINGLNSAIKRHRLASWIKS--QDPSV--CCIQETHLTCRDT----HR--LKI----------------KGWRK 59 (236)
T ss_dssp EEEEEEECSCCCSHHHHHHHHHHHHH--HCCSE--EEEECCCCCTTSG----GG--CCC----------------TTCCE
T ss_pred eEEEEEEcCCccchhhHHHHHHHHHH--CCCeE--EEEEcccCccccc----hh--hhh----------------cccce
Confidence 7789999975532 13467778875 34665 5799974321000 00 000 00111
Q ss_pred CEEEEeeeecccEEEEEEEecCCcCccCceeeceeecccCcccCCCceeEEEEEEcCeEEEEEeccccCCcc
Q 003217 632 TFERVGSRQLAGLLIAVWVRKNLKDYVGDVDVAAVPCGFGRAIGNKGAVGLRVRVYDRIMCFVNCHFAAHLE 703 (838)
Q Consensus 632 ~y~~v~s~~l~g~~l~vf~r~~~~~~i~~v~~~~v~~G~~~~~gnKG~v~i~~~i~~~~~~Fv~~HLaa~~~ 703 (838)
.|.........| .++|++..+.... ..+.... ..-.+.+.+.+.+..++++|.|+.....
T Consensus 60 ~~~~~~~~~~~g--~~i~~k~~~~~~~-----~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~y~~~~~~ 119 (236)
T d1vyba_ 60 IYQANGKQKKAG--VAILVSDKTDFKP-----TKIKRDK-----EGHYIMVKGSIQQEELTILNIYAPNTGA 119 (236)
T ss_dssp EEEECCSSSSCC--EEEEECTTCCCEE-----EEEEECT-----TSSEEEEEEEETTEEEEEEEEECCSSSH
T ss_pred EEEeeccccccc--eeeEeeccccccc-----ccccccc-----cccceeeeeeeccCcceeEEeccccccc
Confidence 122222223334 3567776543211 1111211 1224567788889999999999976543
No 69
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=97.00 E-value=0.0088 Score=62.90 Aligned_cols=105 Identities=8% Similarity=0.102 Sum_probs=58.6
Q ss_pred eEEEEEcCCCc-EEE-EECCCeEEEEcCC-CC--eeeEeec-----------------CCccEE--EEEEcCCEEEEEee
Q 003217 422 TEALTTSIDGM-IWT-GGANGLLLQWDPN-GN--RLQDFQY-----------------LPFAVQ--CLCTFGSQIWVGYM 477 (838)
Q Consensus 422 v~ala~S~dg~-l~S-gs~DgtIrlWD~~-g~--~l~tl~~-----------------H~~~V~--sls~dG~~LasGs~ 477 (838)
...++|+|||+ +++ .-.+++|.+|+.+ ++ .+..... +..... .+++||++|+++..
T Consensus 195 Pr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr 274 (365)
T d1jofa_ 195 PRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSR 274 (365)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEE
T ss_pred eEEEEECCCCceEEEeccCCCEEEEEEecCCCceEEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcc
Confidence 45678899988 434 4457889999883 22 2222110 111222 34678999988753
Q ss_pred ------CCeEEEEeCC--Ccccccc-----cccccCEEEE--Ee-CCCEEEEE-cCCCCeeeeecC
Q 003217 478 ------NGIVQVLDLE--GNLLGGW-----VAHSSPVIKM--AV-GAGYIFTL-ANHGGIRGWNVT 526 (838)
Q Consensus 478 ------DgtIrlWD~~--g~~i~~l-----~gH~~~V~sl--a~-dg~~l~S~-S~DgtIrlWdl~ 526 (838)
...|..|++. +.+.... .........| .+ +|++|+.+ ..+++|.+|++.
T Consensus 275 ~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~G~~p~~i~~~p~~G~~l~va~~~s~~v~v~~~~ 340 (365)
T d1jofa_ 275 ANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp ESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred cCCCccceEEEEEEecCCCceeeEeEeeEEEcCCCCccEEEecCCCCCEEEEEeCCCCeEEEEEEe
Confidence 2247777754 3321111 1111223334 44 68877654 678999999864
No 70
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]}
Probab=97.00 E-value=0.076 Score=53.51 Aligned_cols=111 Identities=11% Similarity=0.006 Sum_probs=74.3
Q ss_pred ceeEEEEecCC-EEEEe--cCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEE
Q 003217 133 CFLRTIVCTEE-QLWAG--GENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSG 209 (838)
Q Consensus 133 ~~~~~l~~~~~-~l~~g--~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSG 209 (838)
.++..++.+.+ .||++ .++.|+.||...... .+.. . .+.+.+++++++|++++++
T Consensus 28 ~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~-------------------~~~~--~-~~~~~gla~~~dG~l~v~~ 85 (302)
T d2p4oa1 28 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ-------------------IHAT--V-EGKVSGLAFTSNGDLVATG 85 (302)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE-------------------EEEE--C-SSEEEEEEECTTSCEEEEE
T ss_pred CCcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEE-------------------EEEc--C-CCCcceEEEcCCCCeEEEe
Confidence 46777777654 67764 366777777542111 0111 1 4578999999999999999
Q ss_pred eCCCcEEEEECCCCccCCCCCcceeEEe--ccccccEEEEEEecCCCEE-EeeCCCcEEEEECCCc
Q 003217 210 HRDGRIMCWKMNARLLDSDDGFGEVLSW--QAHRGPVLSLCISSYGDLW-SGSEGGGIKIWPWEAI 272 (838)
Q Consensus 210 s~DGtIrvWd~~~g~~~~~~~~~~~~~l--~gH~~~V~slafs~dG~L~-SgS~DgtIrvWd~~~~ 272 (838)
..++.+.+|+..... .....+ .......+.+++.++|+++ +-+.++.|..++..+.
T Consensus 86 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~ 144 (302)
T d2p4oa1 86 WNADSIPVVSLVKSD-------GTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 144 (302)
T ss_dssp ECTTSCEEEEEECTT-------SCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred cCCceEEEEEecccc-------cceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCC
Confidence 999999888876542 112222 2345678999999999965 6667787777777553
No 71
>d2f1na1 d.151.1.1 (A:1-250) Cytolethal distending toxin subunit B {Escherichia coli [TaxId: 562]}
Probab=96.98 E-value=0.00084 Score=66.30 Aligned_cols=39 Identities=15% Similarity=0.248 Sum_probs=23.4
Q ss_pred CCceeEEEEEEcCeEEEEEeccccCCcc-hHHHHHHHHHHHHHh
Q 003217 676 NKGAVGLRVRVYDRIMCFVNCHFAAHLE-AVNRRNADFDHVYRT 718 (838)
Q Consensus 676 nKG~v~i~~~i~~~~~~Fv~~HLaa~~~-~~~~Rn~d~~~I~~~ 718 (838)
+.+.+.+.+ ..+.++|.||.++.+ +-.++.+....+.+.
T Consensus 119 ~r~~~~~~~----~~~~v~n~Hl~~~~~~~~~~~~~~~~~~~~~ 158 (250)
T d2f1na1 119 GRPLLGIRI----GNDAFFTAHAIAMRNNDAPALVEEVYNFFRD 158 (250)
T ss_dssp CCCEEEEEE----TTEEEEEEECCSSSSCSHHHHHHHHHHHHHT
T ss_pred ccceeeEee----ceEEEEEEEcCCCCchhHHHHHHHHHHHHHH
Confidence 445555554 468899999987743 333344445555444
No 72
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=96.91 E-value=0.067 Score=52.13 Aligned_cols=64 Identities=14% Similarity=0.200 Sum_probs=41.1
Q ss_pred EEEcCCCcEEEEECCC--eEEEEcCCCCeeeEeec-CCccEEEEEEcCCEEEEEeeCCeEEEEeCCCc
Q 003217 425 LTTSIDGMIWTGGANG--LLLQWDPNGNRLQDFQY-LPFAVQCLCTFGSQIWVGYMNGIVQVLDLEGN 489 (838)
Q Consensus 425 la~S~dg~l~Sgs~Dg--tIrlWD~~g~~l~tl~~-H~~~V~sls~dG~~LasGs~DgtIrlWD~~g~ 489 (838)
...+++..++....++ .|.++|++|+.++.++. ....+..+++||++|+- ..++.|.++|+++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~lt~~~~~~~~~~SpDG~~I~f-~~~~~l~~~d~~~g 263 (281)
T d1k32a2 197 PVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILF-SKGGSIYIFNPDTE 263 (281)
T ss_dssp EEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEE-EETTEEEEECTTTC
T ss_pred eeeeccccceecccccccceEEEeCCCCceEEeecCCCcccccCcCCCCEEEE-EeCCEEEEEECCCC
Confidence 3444554444443333 46677887665555554 33467788999998776 45788999998743
No 73
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=96.82 E-value=0.26 Score=48.11 Aligned_cols=69 Identities=10% Similarity=0.056 Sum_probs=43.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCCEEEe-eCCCcEEEEECC
Q 003217 193 SVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGDLWSG-SEGGGIKIWPWE 270 (838)
Q Consensus 193 ~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~L~Sg-S~DgtIrvWd~~ 270 (838)
....++++++|.+.++....+.+++++-.++ .......+ .....+|+++++|+|+.+ .....+.+.+..
T Consensus 58 ~p~gvav~~~g~i~v~d~~~~~i~~~~~~~~--------~~~~~~~~-~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~ 127 (260)
T d1rwia_ 58 QPQGLAVDGAGTVYVTDFNNRVVTLAAGSNN--------QTVLPFDG-LNYPEGLAVDTQGAVYVADRGNNRVVKLAAG 127 (260)
T ss_dssp SCCCEEECTTCCEEEEETTTEEEEECTTCSC--------CEECCCCS-CCSEEEEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred CceEEEEcCCCCEEEeeeeeceeeeeeeccc--------eeeeeeee-eeecccccccccceeEeeccccccccccccc
Confidence 3456899999998888777777776654443 22222222 345689999999997644 344445555543
No 74
>d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]}
Probab=96.80 E-value=0.026 Score=59.14 Aligned_cols=78 Identities=4% Similarity=-0.101 Sum_probs=46.7
Q ss_pred cEEEEEEecCCC-EEEee-CCCcEEEEECCCcceeeecCCCceeeeEEEEeeceeecccceeccceeeeecCCeEEEEEc
Q 003217 243 PVLSLCISSYGD-LWSGS-EGGGIKIWPWEAIEKALSLKPEERHTAALIVERSYIDLRSHLSVNGFSSILTSDIKNLLSD 320 (838)
Q Consensus 243 ~V~slafs~dG~-L~SgS-~DgtIrvWd~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~ 320 (838)
.+.+++|+|||+ |++++ ....|.+|+.......... ... ... .+....+.++++
T Consensus 146 h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g~~~~~-------~~~------~~~-----------~~g~gPr~i~f~ 201 (365)
T d1jofa_ 146 GIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELV-------GSV------DAP-----------DPGDHPRWVAMH 201 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEE-------EEE------ECS-----------STTCCEEEEEEC
T ss_pred cceEEEECCCCCEEEEeeCCCCEEEEEEccCCCceeec-------cce------eec-----------CCCCceEEEEEC
Confidence 478999999998 65554 3457888776432111000 000 000 012345778888
Q ss_pred CCCCEEEEeC--CCcEEEEeccCccE
Q 003217 321 HSRAKVWSAG--FLSFALWDARTREL 344 (838)
Q Consensus 321 ~~~~~V~s~s--~~tI~lWD~~tg~~ 344 (838)
+++..++... +.+|.+||..++..
T Consensus 202 pdg~~~yv~~e~~~~V~v~~~~~~~~ 227 (365)
T d1jofa_ 202 PTGNYLYALMEAGNRICEYVIDPATH 227 (365)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTTC
T ss_pred CCCceEEEeccCCCEEEEEEecCCCc
Confidence 8888887765 36788998876553
No 75
>d2a40b1 d.151.1.1 (B:1-260) Deoxyribonuclease I {Cow (Bos taurus) [TaxId: 9913]}
Probab=96.30 E-value=0.0017 Score=62.35 Aligned_cols=41 Identities=12% Similarity=0.133 Sum_probs=24.0
Q ss_pred CceeEEEEEEcC---eEEEEEeccccCCcchHHHHHHHHHHHHHhc
Q 003217 677 KGAVGLRVRVYD---RIMCFVNCHFAAHLEAVNRRNADFDHVYRTM 719 (838)
Q Consensus 677 KG~v~i~~~i~~---~~~~Fv~~HLaa~~~~~~~Rn~d~~~I~~~l 719 (838)
+......+.... ..+.+++.|+... ....|.+....+++.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 154 (260)
T d2a40b1 111 REPAVVKFSSHSTKVKEFAIVALHSAPS--DAVAEINSLYDVYLDV 154 (260)
T ss_dssp SCCEEEEEECTTSSSSEEEEEECCCCGG--GHHHHHHHHHHHHHHH
T ss_pred ccceeeeeecccccceEEEEEeeccccc--hhhHHHHHHHHHHHHH
Confidence 344444444433 5788889998764 3444555666666654
No 76
>d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]}
Probab=95.82 E-value=1.1 Score=44.64 Aligned_cols=88 Identities=14% Similarity=0.079 Sum_probs=59.1
Q ss_pred ceEEEEEcCCCc-E-EEEECCCeEEEEcCCC---Ce---eeE---eecCCccEEEEEEcCC-EEEEEe-eCCeEEEEeCC
Q 003217 421 RTEALTTSIDGM-I-WTGGANGLLLQWDPNG---NR---LQD---FQYLPFAVQCLCTFGS-QIWVGY-MNGIVQVLDLE 487 (838)
Q Consensus 421 ~v~ala~S~dg~-l-~Sgs~DgtIrlWD~~g---~~---l~t---l~~H~~~V~sls~dG~-~LasGs-~DgtIrlWD~~ 487 (838)
....+++++++. + ++-+..+.|..++.+. .. ... +.+.......++.|.. .||++. ..+.|..||.+
T Consensus 149 ~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp~ 228 (295)
T d2ghsa1 149 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD 228 (295)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred CcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecCC
Confidence 345688999986 4 5555677888887632 11 111 2223334556777633 577665 47789999999
Q ss_pred CcccccccccccCEEEEEeCC
Q 003217 488 GNLLGGWVAHSSPVIKMAVGA 508 (838)
Q Consensus 488 g~~i~~l~gH~~~V~sla~dg 508 (838)
|+++..+......++++++.|
T Consensus 229 G~~~~~i~lP~~~~T~~~FGG 249 (295)
T d2ghsa1 229 GNHIARYEVPGKQTTCPAFIG 249 (295)
T ss_dssp CCEEEEEECSCSBEEEEEEES
T ss_pred CcEeeEecCCCCceEEEEEeC
Confidence 999888887777899998743
No 77
>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B {Haemophilus ducreyi [TaxId: 730]}
Probab=95.45 E-value=0.038 Score=53.41 Aligned_cols=38 Identities=18% Similarity=0.319 Sum_probs=23.0
Q ss_pred eEEEEEEeCCCCCCcc-----cccccccCCCCCceEEEEEeecccC
Q 003217 554 ILAGTWNVGQGRASQD-----ALISWLGSAASDVGIVVVGLQEVEM 594 (838)
Q Consensus 554 i~~~twNv~~~~~~~~-----~l~~wl~~~~~~~di~vig~QE~~~ 594 (838)
+-++|||+.+.....+ .+...+. ...++| ||+|||+..
T Consensus 5 ~rv~TwNi~~~~~~~~~~~~~~~~~~~~-~~~~~D--Ii~LQEv~~ 47 (261)
T d1sr4b_ 5 FKVATWNLQGSSAVNESKWNINVRQLLS-GEQGAD--ILMVQEAGS 47 (261)
T ss_dssp SCEEEEECCCCSSSSHHHHHHHHHHHHC-STTCCS--EEEEESCCS
T ss_pred CEEEEEeCCcCCCCccccccHHHHHHHH-hcCCCC--EEEEEccCc
Confidence 5589999986544322 1222222 245678 579999964
No 78
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.70 E-value=4.5 Score=42.65 Aligned_cols=102 Identities=8% Similarity=-0.070 Sum_probs=60.1
Q ss_pred EecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEE---------eCCCcEEE
Q 003217 147 AGGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSG---------HRDGRIMC 217 (838)
Q Consensus 147 ~g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSG---------s~DGtIrv 217 (838)
...++.|.+||+.+...... ..... +. .-.+....+|||++.|+.+ +..+.+-+
T Consensus 33 ~~~~g~i~~~~~~~~~~~~l------------~~~~~----~~-~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i 95 (465)
T d1xfda1 33 REQKGTVRLWNVETNTSTVL------------IEGKK----IE-SLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (465)
T ss_dssp CCSSSCEEEBCGGGCCCEEE------------ECTTT----TT-TTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred EeCCCcEEEEECCCCCEEEE------------EcCcc----cc-ccccceeEECCCCCeEEEEEcccceeEeeccccEEE
Confidence 34577899999876433111 00000 11 2245567899999988776 34567888
Q ss_pred EECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-EEEeeCCCcEEEEECCCc
Q 003217 218 WKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-LWSGSEGGGIKIWPWEAI 272 (838)
Q Consensus 218 Wd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L~SgS~DgtIrvWd~~~~ 272 (838)
+|+.++. ...+....+..+.+....|||||+ |+-.. ++-|.+.+..++
T Consensus 96 ~d~~~~~------~~~l~~~~~~~~~l~~~~wSPDG~~iafv~-~~nl~~~~~~~~ 144 (465)
T d1xfda1 96 SKIPHGD------PQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGK 144 (465)
T ss_dssp EESSSCC------CEECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSS
T ss_pred EEccCCc------eeeccCccCCccccceeeeccCCceEEEEe-cceEEEEecCCC
Confidence 9998862 111211223344566678999998 65443 556777776553
No 79
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=91.50 E-value=5.7 Score=37.26 Aligned_cols=21 Identities=24% Similarity=0.208 Sum_probs=16.1
Q ss_pred EeccccccEEEEEEecCCC-EE
Q 003217 236 SWQAHRGPVLSLCISSYGD-LW 256 (838)
Q Consensus 236 ~l~gH~~~V~slafs~dG~-L~ 256 (838)
.+..+...+.+-+|||||+ |+
T Consensus 33 ~l~~~~~~~~sP~wSPDGk~IA 54 (269)
T d2hqsa1 33 VVHRSPQPLMSPAWSPDGSKLA 54 (269)
T ss_dssp EEEEESSCEEEEEECTTSSEEE
T ss_pred EEecCCCceeeeEECCCCCEEE
Confidence 3344567888999999998 65
No 80
>d1hd7a_ d.151.1.1 (A:) DNA repair endonuclease Hap1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.87 E-value=0.24 Score=48.11 Aligned_cols=37 Identities=27% Similarity=0.452 Sum_probs=23.8
Q ss_pred eeEEEEEEeCCCCC-CcccccccccCCCCCceEEEEEeeccc
Q 003217 553 KILAGTWNVGQGRA-SQDALISWLGSAASDVGIVVVGLQEVE 593 (838)
Q Consensus 553 ~i~~~twNv~~~~~-~~~~l~~wl~~~~~~~di~vig~QE~~ 593 (838)
.|-+.||||++-+. ....+.+||.. .+||| |||||+-
T Consensus 18 ~mki~S~NvnGlr~~~~~~~~~~i~~--~~pDI--i~LQE~k 55 (275)
T d1hd7a_ 18 TLKICSWNVDGLRAWIKKKGLDWVKE--EAPDI--LCLQETK 55 (275)
T ss_dssp CEEEEEEECSSHHHHHHTTHHHHHHH--HCCSE--EEEECCC
T ss_pred cEEEEEEEeccHHhhhhccHHHHHHh--CCCCE--EEEEccc
Confidence 47899999986321 12334567774 45676 5799973
No 81
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=84.99 E-value=17 Score=34.68 Aligned_cols=73 Identities=12% Similarity=0.214 Sum_probs=49.4
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCC-CE-EEeeCCCcEEEEE
Q 003217 192 SSVMCMVGDEASG-VVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYG-DL-WSGSEGGGIKIWP 268 (838)
Q Consensus 192 ~~V~~la~s~dg~-~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG-~L-~SgS~DgtIrvWd 268 (838)
..+.+|+||...+ +.|+=..++.|+.-+++++. .......-...+.+|+++.-+ +| |+-...+.|.+.+
T Consensus 36 ~~~~~ld~D~~~~~iywsd~~~~~I~~~~l~g~~--------~~~v~~~~~~~p~~iAvD~~~~~lY~~d~~~~~I~~~~ 107 (263)
T d1npea_ 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE--------PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAK 107 (263)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCC--------CEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CcEEEEEEEeCCCEEEEEECCCCeEEEEEcccCC--------cEEEEEeccccccEEEEeccCCeEEEeccCCCEEEEEe
Confidence 3577899997665 45555677889988988752 222222223568999998755 46 5767778899988
Q ss_pred CCCc
Q 003217 269 WEAI 272 (838)
Q Consensus 269 ~~~~ 272 (838)
++..
T Consensus 108 ~dg~ 111 (263)
T d1npea_ 108 MDGT 111 (263)
T ss_dssp TTSC
T ss_pred cCCc
Confidence 8653
No 82
>d1akoa_ d.151.1.1 (A:) DNA-repair enzyme exonuclease III {Escherichia coli [TaxId: 562]}
Probab=84.46 E-value=0.12 Score=49.05 Aligned_cols=35 Identities=26% Similarity=0.302 Sum_probs=25.8
Q ss_pred EEEEEEeCCCCCCcccccccccCCCCCceEEEEEeeccc
Q 003217 555 LAGTWNVGQGRASQDALISWLGSAASDVGIVVVGLQEVE 593 (838)
Q Consensus 555 ~~~twNv~~~~~~~~~l~~wl~~~~~~~di~vig~QE~~ 593 (838)
-+.||||++-+...+.+.+||.. .+|| ||||||+-
T Consensus 2 ki~S~NvnG~r~r~~~i~~~i~~--~~~D--Ii~LQEv~ 36 (268)
T d1akoa_ 2 KFVSFNINGLRARPHQLEAIVEK--HQPD--VIGLQETK 36 (268)
T ss_dssp EEEEEECSCGGGCHHHHHHHHHH--HCCS--EEEEECCC
T ss_pred EEEEEEeCCHHHhHHHHHHHHHH--CCCC--EEEEEeee
Confidence 47899998755555678888874 3566 56899984
No 83
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.51 E-value=14 Score=38.66 Aligned_cols=68 Identities=9% Similarity=-0.005 Sum_probs=40.7
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccE-----------------EEEEEecCCC-E
Q 003217 194 VMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPV-----------------LSLCISSYGD-L 255 (838)
Q Consensus 194 V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V-----------------~slafs~dG~-L 255 (838)
+.-..|||||+.||-.. ++.+-+.+..++. ....+-.|-.+.| .++.|||||+ |
T Consensus 116 l~~~~wSPDG~~iafv~-~~nl~~~~~~~~~-------~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~i 187 (465)
T d1xfda1 116 LQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQ-------AIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRL 187 (465)
T ss_dssp CSBCCBCSSTTCEEEEE-TTEEEEESSSSSC-------CEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEE
T ss_pred cceeeeccCCceEEEEe-cceEEEEecCCCc-------eEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeE
Confidence 44467899998887765 4556666666542 1112222222222 4778999998 6
Q ss_pred EEee-CCCcEEEEEC
Q 003217 256 WSGS-EGGGIKIWPW 269 (838)
Q Consensus 256 ~SgS-~DgtIrvWd~ 269 (838)
+... .+..|+.+.+
T Consensus 188 af~~~D~s~V~~~~~ 202 (465)
T d1xfda1 188 AYAAINDSRVPIMEL 202 (465)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred EEEEecccccceeec
Confidence 6444 5566777765
No 84
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Probab=71.20 E-value=4.5 Score=38.06 Aligned_cols=63 Identities=14% Similarity=0.006 Sum_probs=39.8
Q ss_pred EEcCC--Cc-EEEEECCCeEEEEcCCCCeeeEeecCCccEEE--EEEcCCEEEEEee-CC-----eEEEEeCCCc
Q 003217 426 TTSID--GM-IWTGGANGLLLQWDPNGNRLQDFQYLPFAVQC--LCTFGSQIWVGYM-NG-----IVQVLDLEGN 489 (838)
Q Consensus 426 a~S~d--g~-l~Sgs~DgtIrlWD~~g~~l~tl~~H~~~V~s--ls~dG~~LasGs~-Dg-----tIrlWD~~g~ 489 (838)
..||| |. ++..+ ++.|.+.|+.|...+.++.+...+.. +++||++||-... ++ .|.++++.+.
T Consensus 5 ~~sPdi~G~~v~f~~-~~dl~~~d~~~g~~~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g 78 (281)
T d1k32a2 5 LLNPDIHGDRIIFVC-CDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENG 78 (281)
T ss_dssp CEEEEEETTEEEEEE-TTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTT
T ss_pred ccCCCCCCCEEEEEe-CCcEEEEECCCCCEEEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCC
Confidence 35677 76 54444 45677779966556667776666664 4678998885432 22 4666777643
No 85
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Probab=68.40 E-value=49 Score=31.10 Aligned_cols=79 Identities=6% Similarity=-0.151 Sum_probs=45.5
Q ss_pred cCCCCeeeEee-cCCccEEEEEEc--CCEEEEEe-eCCeEEEEeCCCccccc-ccccccCEEEEEeCCCEEEEEcC-CCC
Q 003217 446 DPNGNRLQDFQ-YLPFAVQCLCTF--GSQIWVGY-MNGIVQVLDLEGNLLGG-WVAHSSPVIKMAVGAGYIFTLAN-HGG 519 (838)
Q Consensus 446 D~~g~~l~tl~-~H~~~V~sls~d--G~~LasGs-~DgtIrlWD~~g~~i~~-l~gH~~~V~sla~dg~~l~S~S~-Dgt 519 (838)
+++|.-.+.+. ..-.....|+.| +++|+... ..+.|..-|+.|.-.+. +.+- ....+|+.++++|++... .++
T Consensus 152 ~~dG~~~~~i~~~~~~~P~glaiD~~~~~lYw~d~~~~~I~~~~~~g~~~~~v~~~~-~~P~~lav~~~~lYwtd~~~~~ 230 (263)
T d1npea_ 152 HMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGL-QYPFAVTSYGKNLYYTDWKTNS 230 (263)
T ss_dssp ETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECC-CSEEEEEEETTEEEEEETTTTE
T ss_pred cCCCCCceeeeeecccccceEEEeecCcEEEEEeCCCCEEEEEECCCCCeEEEECCC-CCcEEEEEECCEEEEEECCCCE
Confidence 44554333332 222455677775 56775544 57899999998643222 2222 234678888888887754 455
Q ss_pred eeeeec
Q 003217 520 IRGWNV 525 (838)
Q Consensus 520 IrlWdl 525 (838)
|..-|.
T Consensus 231 I~~~~~ 236 (263)
T d1npea_ 231 VIAMDL 236 (263)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 554444
No 86
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.58 E-value=61 Score=30.40 Aligned_cols=78 Identities=13% Similarity=0.158 Sum_probs=46.7
Q ss_pred CCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-E-EEeeCCCcEEEE
Q 003217 191 VSSVMCMVGDEASG-VVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-L-WSGSEGGGIKIW 267 (838)
Q Consensus 191 ~~~V~~la~s~dg~-~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L-~SgS~DgtIrvW 267 (838)
...+..|+||+..+ +.|+=..++.|+.-++++.. ... .........-..+.+||++.-+. | |+-+..++|.+.
T Consensus 29 ~~~~~~id~d~~~~~lYw~D~~~~~I~~~~l~~~~---~~~-~~~~~~~~~~~~p~glAvD~~~~~lY~~d~~~~~I~v~ 104 (266)
T d1ijqa1 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH---GVS-SYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVA 104 (266)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC------------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCEEEEEEecCCC---CCc-ceEEEEeCCCCCcceEEEeeccceEEEEecCCCEEEeE
Confidence 34577899998665 55565567778877776421 000 11111222234567899987655 5 677778899999
Q ss_pred ECCCc
Q 003217 268 PWEAI 272 (838)
Q Consensus 268 d~~~~ 272 (838)
++++.
T Consensus 105 ~~~g~ 109 (266)
T d1ijqa1 105 DTKGV 109 (266)
T ss_dssp ETTSS
T ss_pred ecCCc
Confidence 88653
No 87
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=52.80 E-value=60 Score=31.44 Aligned_cols=72 Identities=7% Similarity=0.128 Sum_probs=44.6
Q ss_pred eEEEEEcCCCCEEEEEeCCC-----------cEEEEECCCCccCCCCCcceeEEe-ccccccEEEEEEecCCCE-EEeeC
Q 003217 194 VMCMVGDEASGVVWSGHRDG-----------RIMCWKMNARLLDSDDGFGEVLSW-QAHRGPVLSLCISSYGDL-WSGSE 260 (838)
Q Consensus 194 V~~la~s~dg~~LaSGs~DG-----------tIrvWd~~~g~~~~~~~~~~~~~l-~gH~~~V~slafs~dG~L-~SgS~ 260 (838)
+...+.-.+|++++-|+.+. .+.+||..++. ....... ..|.....+.++.+||++ +.|+.
T Consensus 22 ~~~a~~~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~------w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~ 95 (387)
T d1k3ia3 22 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI------VSDRTVTVTKHDMFCPGISMDGNGQIVVTGGN 95 (387)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC------BCCCEEEECSCCCSSCEEEECTTSCEEEECSS
T ss_pred cEEEEEeeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCc------EeecCCCCCCcccceeEEEEecCCcEEEeecC
Confidence 33444556889888888532 36789998852 1222222 233333345678899995 56654
Q ss_pred C-CcEEEEECCC
Q 003217 261 G-GGIKIWPWEA 271 (838)
Q Consensus 261 D-gtIrvWd~~~ 271 (838)
+ .++.+||..+
T Consensus 96 ~~~~~~~yd~~~ 107 (387)
T d1k3ia3 96 DAKKTSLYDSSS 107 (387)
T ss_dssp STTCEEEEEGGG
T ss_pred CCcceeEecCcc
Confidence 4 6899999865
No 88
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=52.26 E-value=96 Score=30.18 Aligned_cols=163 Identities=10% Similarity=0.136 Sum_probs=84.4
Q ss_pred CEEEEecCCCEEEEeCCCCccccccccccccCCCCCCCCCCceeeecCCCCeEEEEEcCCCCEEEEEe---CC----CcE
Q 003217 143 EQLWAGGENGLRVWNLKELYDESESDSVSVSKSKGEDGTAPFKESVKGVSSVMCMVGDEASGVVWSGH---RD----GRI 215 (838)
Q Consensus 143 ~~l~~g~d~~vrvWd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~~~V~~la~s~dg~~LaSGs---~D----GtI 215 (838)
+.|-+-++..|+.|+++....+. +.=.|++ .+. ..-|..-..|++.++++.-+ .| |.+
T Consensus 114 ~~L~lVT~taVYHW~~~g~s~P~-----k~fdR~~---------~L~-~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~m 178 (327)
T d1utca2 114 NTVALVTDNAVYHWSMEGESQPV-----KMFDRHS---------SLA-GCQIINYRTDAKQKWLLLTGISAQQNRVVGAM 178 (327)
T ss_dssp SEEEEECSSEEEEEESSSSCCCE-----EEEECCG---------GGT-TCEEEEEEECTTSCEEEEEEEEEETTEEEEEE
T ss_pred CEEEEEcCCceEEEcccCCCCch-----hhhhhcc---------ccc-CceEEEEEECCCCCEEEEEeEecCCCceeEEE
Confidence 34444678899999985321111 0000111 122 44577777888888766532 33 577
Q ss_pred EEEECCCCccCCCCCcceeEEeccccccEEEEEEecCC---CEE-E---eeCCCcEEEEECCCcce-eeecCCCceeeeE
Q 003217 216 MCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYG---DLW-S---GSEGGGIKIWPWEAIEK-ALSLKPEERHTAA 287 (838)
Q Consensus 216 rvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG---~L~-S---gS~DgtIrvWd~~~~~~-~~~~~~~~~~~~~ 287 (838)
.++..+. +..+.+.||.+.-..+.+..+. +|+ - ++..+.+.|-++.+... ...+ .....
T Consensus 179 QLYS~er---------~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~~~kLhIiEig~~~~g~~~f---~kk~v- 245 (327)
T d1utca2 179 QLYSVDR---------KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF---PKKAV- 245 (327)
T ss_dssp EEEETTT---------TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSCCCTTCCCC---CCEEE-
T ss_pred EEEEecc---------CcCccccceeeeeEEEEcCCCCCCceEEEEEECCCCCcEEEEEEcCCCccCCCCC---cceeE-
Confidence 8999987 4577789998777666654433 232 2 23335666666643110 0000 00000
Q ss_pred EEEeeceeecccceeccceeeeecCCeEEEEEcCCCCEEEEeC-CCcEEEEeccCccEEEE
Q 003217 288 LIVERSYIDLRSHLSVNGFSSILTSDIKNLLSDHSRAKVWSAG-FLSFALWDARTRELLKV 347 (838)
Q Consensus 288 ~~~~~s~~~l~~~~~~~~~~~~~s~~v~~las~~~~~~V~s~s-~~tI~lWD~~tg~~l~~ 347 (838)
++. ..... ...--.++..++.-+.|...+ .+-|.++|+.||.++-.
T Consensus 246 --------di~--fppea----~~DFPvamqvs~kygiiyviTK~G~i~lyDleTgt~i~~ 292 (327)
T d1utca2 246 --------DVF--FPPEA----QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 292 (327)
T ss_dssp --------ECC--CCTTC----TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred --------EEE--CCccc----cCCcEEEEEeeccCCEEEEEecCcEEEEEEcccccEEEE
Confidence 000 00000 011123344444444554444 57799999999998654
No 89
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]}
Probab=45.41 E-value=45 Score=32.46 Aligned_cols=86 Identities=9% Similarity=-0.029 Sum_probs=45.4
Q ss_pred eEEEEcC-CCCee--eEee-cCCc--cEEEEEEcCCEEEEEeeC-CeEEEEeCCCc---ccccccccccCEEE-EEeCCC
Q 003217 441 LLLQWDP-NGNRL--QDFQ-YLPF--AVQCLCTFGSQIWVGYMN-GIVQVLDLEGN---LLGGWVAHSSPVIK-MAVGAG 509 (838)
Q Consensus 441 tIrlWD~-~g~~l--~tl~-~H~~--~V~sls~dG~~LasGs~D-gtIrlWD~~g~---~i~~l~gH~~~V~s-la~dg~ 509 (838)
.+.+||+ ++.-. ..+. .|.. .-..+..+|+.++.|+.+ .++.+||.... ....+......-.. +..||+
T Consensus 53 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~~~w~~~~~~~~~r~~~~~~~~~dG~ 132 (387)
T d1k3ia3 53 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR 132 (387)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC
T ss_pred EEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCccCcccccccccccccccceeeecCCc
Confidence 3778999 55322 2222 2221 222344588888888754 68999997632 12222211111122 235888
Q ss_pred EEEEEcCCC------CeeeeecC
Q 003217 510 YIFTLANHG------GIRGWNVT 526 (838)
Q Consensus 510 ~l~S~S~Dg------tIrlWdl~ 526 (838)
.++.++.+. .+.+||..
T Consensus 133 v~v~GG~~~~~~~~~~v~~yd~~ 155 (387)
T d1k3ia3 133 VFTIGGSWSGGVFEKNGEVYSPS 155 (387)
T ss_dssp EEEECCCCCSSSCCCCEEEEETT
T ss_pred eeeeccccccccccceeeeecCC
Confidence 887776432 35555543
No 90
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=42.09 E-value=14 Score=39.89 Aligned_cols=58 Identities=14% Similarity=0.220 Sum_probs=34.9
Q ss_pred CcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCC-CEEEeeCCCcEEEEECCCcceeeecC
Q 003217 213 GRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYG-DLWSGSEGGGIKIWPWEAIEKALSLK 279 (838)
Q Consensus 213 GtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG-~L~SgS~DgtIrvWd~~~~~~~~~~~ 279 (838)
|.|..+|+.+| +..-+..-+ .++.+=.++-.| .+++|+.||.++.+|.++++...++.
T Consensus 466 G~l~AiD~~TG--------~i~W~~~~~-~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~~~ 524 (582)
T d1flga_ 466 GSLRAMDPVSG--------KVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp EEEEEECTTTC--------CEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CeEEEEcCCCC--------cEEeecCCC-CCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEEEE
Confidence 46777777776 333322222 122211122334 46789999999999999998776553
No 91
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=38.89 E-value=22 Score=38.17 Aligned_cols=28 Identities=14% Similarity=0.177 Sum_probs=22.8
Q ss_pred cCCCEEEeeCCCcEEEEECCCcceeeec
Q 003217 251 SYGDLWSGSEGGGIKIWPWEAIEKALSL 278 (838)
Q Consensus 251 ~dG~L~SgS~DgtIrvWd~~~~~~~~~~ 278 (838)
..|.++.|+.|+.++.+|.++++...++
T Consensus 474 agglVf~G~~dg~l~A~Da~tGe~lW~~ 501 (571)
T d2ad6a1 474 KGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 4455678999999999999998876654
No 92
>d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]}
Probab=36.35 E-value=27 Score=37.34 Aligned_cols=27 Identities=15% Similarity=0.199 Sum_probs=22.0
Q ss_pred CCEEEeeCCCcEEEEECCCcceeeecC
Q 003217 253 GDLWSGSEGGGIKIWPWEAIEKALSLK 279 (838)
Q Consensus 253 G~L~SgS~DgtIrvWd~~~~~~~~~~~ 279 (838)
|.++.|+.|+.++.+|.++++...++.
T Consensus 489 glVF~G~~dg~l~A~Da~TGe~LW~~~ 515 (573)
T d1kb0a2 489 NVVFQGTADGRLVAYHAATGEKLWEAP 515 (573)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CEEEEECCCCeEEEEECCCCcEeEEEE
Confidence 346789999999999999988776553
No 93
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.95 E-value=1.7e+02 Score=26.97 Aligned_cols=88 Identities=10% Similarity=-0.052 Sum_probs=52.0
Q ss_pred CeEEEEcCCCCeeeEeec-CCccEEEEEEc--CCEEEEEe-eCCeEEEEeCCCcc---cccccccccCEEEEEeCCCEEE
Q 003217 440 GLLLQWDPNGNRLQDFQY-LPFAVQCLCTF--GSQIWVGY-MNGIVQVLDLEGNL---LGGWVAHSSPVIKMAVGAGYIF 512 (838)
Q Consensus 440 gtIrlWD~~g~~l~tl~~-H~~~V~sls~d--G~~LasGs-~DgtIrlWD~~g~~---i~~l~gH~~~V~sla~dg~~l~ 512 (838)
+.|..-++.|...+.+.. .-...+.|+.| +++|+.+. ..+.|..-|+.|.- +.....+.....+|+.++.+|+
T Consensus 143 ~~I~r~~~dGs~~~~l~~~~~~~p~gl~iD~~~~~lYw~d~~~~~I~~~~~dG~~~~~~~~~~~~~~~p~~lav~~~~ly 222 (266)
T d1ijqa1 143 AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVF 222 (266)
T ss_dssp CEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEE
T ss_pred cceeEeccCCCceecccccccceeeEEEeeccccEEEEecCCcCEEEEEECCCCCEEEEEeCCCcccccEEEEEECCEEE
Confidence 345555566654444432 23455677765 56666654 57899999988642 2222223345678888888888
Q ss_pred EEc-CCCCeeeeecCC
Q 003217 513 TLA-NHGGIRGWNVTS 527 (838)
Q Consensus 513 S~S-~DgtIrlWdl~s 527 (838)
+.. .++.|...+..+
T Consensus 223 ~td~~~~~I~~~~~~~ 238 (266)
T d1ijqa1 223 WTDIINEAIFSANRLT 238 (266)
T ss_dssp EEETTTTEEEEEETTT
T ss_pred EEECCCCeEEEEECCC
Confidence 764 556665555443
No 94
>d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=34.53 E-value=2e+02 Score=27.75 Aligned_cols=31 Identities=10% Similarity=0.220 Sum_probs=24.9
Q ss_pred CCeEEEEeCCCcccccccccccCEEEEEeCC
Q 003217 478 NGIVQVLDLEGNLLGGWVAHSSPVIKMAVGA 508 (838)
Q Consensus 478 DgtIrlWD~~g~~i~~l~gH~~~V~sla~dg 508 (838)
.|.++||..+.+..+.+.||...-..+..+|
T Consensus 175 ~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g 205 (327)
T d1utca2 175 VGAMQLYSVDRKVSQPIEGHAASFAQFKMEG 205 (327)
T ss_dssp EEEEEEEETTTTEEEEECCSEEEEEEECCTT
T ss_pred eEEEEEEEeccCcCccccceeeeeEEEEcCC
Confidence 4789999999889999999987766665443
No 95
>d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=30.83 E-value=2.9e+02 Score=28.50 Aligned_cols=76 Identities=21% Similarity=0.284 Sum_probs=45.1
Q ss_pred CeEEEEcC-CCCeeeEee-cCCccEEEEEEcCCEEEEEeeCCeEEEEeCC-Ccccccc--c--ccccCEEEEEeCCC-EE
Q 003217 440 GLLLQWDP-NGNRLQDFQ-YLPFAVQCLCTFGSQIWVGYMNGIVQVLDLE-GNLLGGW--V--AHSSPVIKMAVGAG-YI 511 (838)
Q Consensus 440 gtIrlWD~-~g~~l~tl~-~H~~~V~sls~dG~~LasGs~DgtIrlWD~~-g~~i~~l--~--gH~~~V~sla~dg~-~l 511 (838)
|.|.-+|+ +|+.+=+.. +....--.|+..|..|++|+.||.++.+|.+ |+.+=.+ . .+..+++= ..||+ |+
T Consensus 444 G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~~l~~~~~a~P~ty-~~dGkqYi 522 (571)
T d2ad6a1 444 GQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTY-SFKGKQYI 522 (571)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EETTEEEE
T ss_pred ccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEEECCCCceecceEE-EECCEEEE
Confidence 57888998 687653322 1110001245578888899999999999987 7765333 2 22233332 34665 66
Q ss_pred EEEcC
Q 003217 512 FTLAN 516 (838)
Q Consensus 512 ~S~S~ 516 (838)
+..+.
T Consensus 523 ~v~~g 527 (571)
T d2ad6a1 523 GSMYG 527 (571)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 54443
No 96
>d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=30.20 E-value=24 Score=37.84 Aligned_cols=42 Identities=21% Similarity=0.423 Sum_probs=32.3
Q ss_pred CCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEec----cccccEEEEEEecCCC
Q 003217 202 ASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSWQ----AHRGPVLSLCISSYGD 254 (838)
Q Consensus 202 dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l~----gH~~~V~slafs~dG~ 254 (838)
.|++|+.|+.||.++.+|.++| +++-+++ ++..+ |.+..||+
T Consensus 496 agglVF~Gt~dg~l~A~Da~TG--------e~LW~~~~~~~~~~~P---~ty~~~G~ 541 (582)
T d1flga_ 496 AGNLVFTGTGDGYFKAFDAKSG--------KELWKFQTGSGIVSPP---ITWEQDGE 541 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTC--------CEEEEEECSSCCCSCC---EEEEETTE
T ss_pred cCCeEEEeCCCCeEEEEECCCC--------cEeEEEECCCCccccC---EEEEECCE
Confidence 6789999999999999999999 5665543 23344 45778896
No 97
>d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]}
Probab=27.98 E-value=49 Score=34.97 Aligned_cols=28 Identities=11% Similarity=0.214 Sum_probs=22.4
Q ss_pred cCCCEEEeeCCCcEEEEECCCcceeeec
Q 003217 251 SYGDLWSGSEGGGIKIWPWEAIEKALSL 278 (838)
Q Consensus 251 ~dG~L~SgS~DgtIrvWd~~~~~~~~~~ 278 (838)
..|-++.|+.||.++.+|.++++...++
T Consensus 468 agglVF~G~~dg~l~A~Da~tGe~LW~~ 495 (560)
T d1kv9a2 468 AGNLVFQGTAAGQMHAYSADKGEALWQF 495 (560)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEeEEE
Confidence 3444678999999999999998876654
No 98
>d1tl2a_ b.67.1.1 (A:) Tachylectin-2 {Japanese horseshoe crab (Tachypleus tridentatus) [TaxId: 6853]}
Probab=27.19 E-value=79 Score=28.71 Aligned_cols=67 Identities=15% Similarity=0.004 Sum_probs=42.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCccCCCCCcceeEEe-ccccccEEEEEEecCCCEEEeeCC
Q 003217 191 VSSVMCMVGDEASGVVWSGHRDGRIMCWKMNARLLDSDDGFGEVLSW-QAHRGPVLSLCISSYGDLWSGSEG 261 (838)
Q Consensus 191 ~~~V~~la~s~dg~~LaSGs~DGtIrvWd~~~g~~~~~~~~~~~~~l-~gH~~~V~slafs~dG~L~SgS~D 261 (838)
-+-+..|-|+|+|.+-+. ..|+ +.-|....+.. ++-+....++ ++|...-.-+.|+|+|.||..+.+
T Consensus 133 w~df~~lFFdP~G~LYaV-~~~~-l~k~~pP~~~~--d~WL~~st~igr~~w~~~~fi~Fs~dG~L~~v~~g 200 (235)
T d1tl2a_ 133 WSGFKFLFFHPNGYLYAV-HGQQ-FYKALPPVSNQ--DNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQGG 200 (235)
T ss_dssp GGGEEEEEECTTSCEEEE-ETTE-EEEECCCSSTT--CCHHHHCEEEESSSGGGEEEEEECTTSCEEEEETT
T ss_pred cCceeEEEECCCceEEEE-ECCc-EEEcCCCCCCC--chhhhhhhhhccCcccCceEEEECCCCcEEEEeCC
Confidence 345778999999877666 5554 66666544310 1111111223 477777889999999999877653
No 99
>d1v04a_ b.68.6.2 (A:) Serum paraoxonase/arylesterase 1, PON1 {Rabit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=27.04 E-value=1.5e+02 Score=28.70 Aligned_cols=70 Identities=13% Similarity=-0.059 Sum_probs=45.9
Q ss_pred CeEEEEEcCCCCEEEEE--eCC-------------CcEEEEECCCCccCCCCCcceeEEeccccccEEEEEEecCCC-E-
Q 003217 193 SVMCMVGDEASGVVWSG--HRD-------------GRIMCWKMNARLLDSDDGFGEVLSWQAHRGPVLSLCISSYGD-L- 255 (838)
Q Consensus 193 ~V~~la~s~dg~~LaSG--s~D-------------GtIrvWd~~~g~~~~~~~~~~~~~l~gH~~~V~slafs~dG~-L- 255 (838)
....|++..+|+..+|= ... ++..+|..+++ . .......-..-+.|+++||++ |
T Consensus 151 ~pNDv~~~~~g~fy~Tnd~~~~~~~~~~~e~~~~~~~g~v~~~~~~--------~-~~~~~~~l~~pNGI~~s~d~~~ly 221 (340)
T d1v04a_ 151 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--------D-VRVVAEGFDFANGINISPDGKYVY 221 (340)
T ss_dssp SEEEEEEEETTEEEEEESCSCCSHHHHHHHHHTTCCCEEEEEECSS--------C-EEEEEEEESSEEEEEECTTSSEEE
T ss_pred CccceEEecCCCEEEecCccCcChhhhhhhHhhcCCceeEEEEcCC--------c-eEEEcCCCCccceeEECCCCCEEE
Confidence 46778888888888882 111 24556665554 1 222222234578999999997 4
Q ss_pred EEeeCCCcEEEEECCC
Q 003217 256 WSGSEGGGIKIWPWEA 271 (838)
Q Consensus 256 ~SgS~DgtIrvWd~~~ 271 (838)
++-+..+.|+++++..
T Consensus 222 Va~t~~~~i~~y~~~~ 237 (340)
T d1v04a_ 222 IAELLAHKIHVYEKHA 237 (340)
T ss_dssp EEEGGGTEEEEEEECT
T ss_pred EEeCCCCeEEEEEeCC
Confidence 5777788999998864
No 100
>d1et9a1 b.40.2.2 (A:1-95) Streptococcal superantigen Spe-H {Streptococcus pyogenes [TaxId: 1314]}
Probab=23.46 E-value=14 Score=27.68 Aligned_cols=22 Identities=27% Similarity=0.490 Sum_probs=15.7
Q ss_pred cccccC--CCCCceEEEEEeeccc
Q 003217 572 ISWLGS--AASDVGIVVVGLQEVE 593 (838)
Q Consensus 572 ~~wl~~--~~~~~di~vig~QE~~ 593 (838)
++|+.+ ...+.|||++..||+.
T Consensus 54 kdwisqefkdkevdiyalsaqevc 77 (95)
T d1et9a1 54 KDWISQEFKDKEVDIYALSAQEVC 77 (95)
T ss_dssp STHHHHHHTTSCEEEEEEEEEC--
T ss_pred hhhhhhhhccccceEEEechhHHH
Confidence 467764 3467899999999975
No 101
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]}
Probab=21.80 E-value=59 Score=34.72 Aligned_cols=27 Identities=19% Similarity=0.246 Sum_probs=22.0
Q ss_pred CCC-EEEeeCCCcEEEEECCCcceeeec
Q 003217 252 YGD-LWSGSEGGGIKIWPWEAIEKALSL 278 (838)
Q Consensus 252 dG~-L~SgS~DgtIrvWd~~~~~~~~~~ 278 (838)
.|. ++.|+.||.++.+|.++++...++
T Consensus 483 agglVF~G~~Dg~l~A~Da~TGe~LW~~ 510 (596)
T d1w6sa_ 483 AGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (596)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCcEeeEE
Confidence 344 568999999999999998877655
No 102
>d1s0yb_ d.80.1.1 (B:) Trans-3-chloroacrylic acid dehalogenase beta-subunit, CaaD2 {Pseudomonas pavonaceae [TaxId: 47881]}
Probab=20.14 E-value=36 Score=23.26 Aligned_cols=25 Identities=32% Similarity=0.611 Sum_probs=19.6
Q ss_pred EEeccccCCcchHHHHHHHHHHHHHh
Q 003217 693 FVNCHFAAHLEAVNRRNADFDHVYRT 718 (838)
Q Consensus 693 Fv~~HLaa~~~~~~~Rn~d~~~I~~~ 718 (838)
|+-||.+.+.+ +.||.+-.+.|++-
T Consensus 2 fiechi~~gls-~ar~~ql~rdii~v 26 (55)
T d1s0yb_ 2 FIECHIATGLS-VARKQQLIRDVIDV 26 (55)
T ss_dssp EEEEEEETTCC-HHHHHHHHHHHHHH
T ss_pred ceeeeehhhhh-HHHHHHHHHHHHHH
Confidence 89999999875 67777777777663
Done!