Your job contains 1 sequence.
>003218
MVENLIPCYRFNLIILSYCVFLSCFFVRSYSLGEVDAYGTFSISSFRYPETRLRPFDSRY
FRVDLPPWFSSLSIVLESDVDLDARSIAKVPESALPLICLRDGSLPLPQVTNAFVKGLVL
GSFSNGSSNELEDIQNEEQCYPMQKNISVKLTNEQISPGAWYLGFFNGVGAIRTQSKMII
RGPSYSFTANISVEGCTTSTMWGQYCNQSVDPLSCVRSDSYNLTEQFPDSKLNNKTTENG
IFCRNSFDSPCHGNGEIKVFFLDVLGIAEQLIIMAMNVTFSMTQSNNTLNAGGANIVCFA
RHGAMPSEILHDYSGDISNGPLIVDSPKVGRWYITIIPVNLSKELGETRNAGIQVCYSLE
WQVLECPMGKAGLNCKWERYILQTVIRKETLFESYYIPVSEKVPSDSAAFPLEPLLSNSS
YDEGQDNTWTYFLLDIPRGAAGGSIHIQLTSDTKIKHEIYAKSGGLPSLQSWDYYYANRT
NNSVGSMFFKLYNSSEEKVDFYILYVREGTWGFGIRHVNTSKSETVMSVSLERCPKRCSS
HGQCRNAFDASGLTLYSFCACDRDHGGFDCSVELVSHRGHVQQSVALIASNAAALLPAYQ
ALRQKAFAEWVLFTASGISSGLYHACDVGTWCALSFNVLQFMDFWLSFMAVVSTFIYLTT
IDEALKRTIHTVVAILTAMMAITKATRSSNIILVISIGAAGLLIGLLVELSTKFRSFSLR
FGFCMNMVDRQQTIMEWLRNFMKTILRRFRWGFVLVGFAALAMAAISWKLETSQSYWIWH
SIWHVSIYTSSFFFLCSKVSSLNSENQRPLDGTYELTRQDSMPRGDSEGRERPEVLTI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003218
(838 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2062907 - symbol:AT2G46060 "AT2G46060" species... 2342 4.9e-243 1
UNIPROTKB|A6NDV4 - symbol:TMEM8B "Transmembrane protein 8... 183 7.8e-13 2
MGI|MGI:2441680 - symbol:Tmem8b "transmembrane protein 8B... 181 1.3e-12 2
UNIPROTKB|A6QLK4 - symbol:TMEM8B "Transmembrane protein 8... 180 1.3e-12 2
UNIPROTKB|F1STB0 - symbol:TMEM8B "Uncharacterized protein... 180 3.1e-11 3
RGD|1310012 - symbol:Tmem8b "transmembrane protein 8B" sp... 181 4.1e-11 3
UNIPROTKB|F1MLC4 - symbol:TMEM8B "Transmembrane protein 8... 180 4.2e-11 4
UNIPROTKB|K4DI83 - symbol:TMEM8A "Transmembrane protein 8... 138 1.2e-08 2
UNIPROTKB|Q9HCN3 - symbol:TMEM8A "Transmembrane protein 8... 138 2.5e-08 2
MGI|MGI:1926283 - symbol:Tmem8 "transmembrane protein 8 (... 128 1.5e-07 3
RGD|1311395 - symbol:Tmem8a "transmembrane protein 8A" sp... 133 2.3e-07 3
>TAIR|locus:2062907 [details] [associations]
symbol:AT2G46060 "AT2G46060" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISS] GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR
InterPro:IPR013032 PROSITE:PS00022 InterPro:IPR021910 Pfam:PF12036
EMBL:AY091042 EMBL:BT004375 IPI:IPI00518675 RefSeq:NP_850444.1
UniGene:At.28256 PRIDE:Q8RWX6 EnsemblPlants:AT2G46060.1
GeneID:819214 KEGG:ath:AT2G46060 TAIR:At2g46060
HOGENOM:HOG000084866 InParanoid:Q8RWX6 OMA:CDVGTWC PhylomeDB:Q8RWX6
ProtClustDB:CLSN2680273 Genevestigator:Q8RWX6 Uniprot:Q8RWX6
Length = 807
Score = 2342 (829.5 bits), Expect = 4.9e-243, P = 4.9e-243
Identities = 463/826 (56%), Positives = 586/826 (70%)
Query: 14 IILSYCVFLSCFFVRSYSLGEV-DAYGTF-SISSFRYPETRLRPFDSRYFRVDLPPWFSS 71
++L V SC L + D G F ++SSFRYPE+ +RP+D+RY RVDLPPWFSS
Sbjct: 7 LLLRTLVVFSCALSICNCLQDAADNNGNFFTVSSFRYPESEVRPYDTRYIRVDLPPWFSS 66
Query: 72 LSIVLESDVDLDARSIAKVPESALPLICLRDGSLPLPQVTNAFVKGLVLGSFSNGSSNEL 131
L++ +ESDVD+ A+SI+K+ +S LP+IC RDGS PLP + ++GL LG F NGS
Sbjct: 67 LNVAIESDVDITAKSISKISKSLLPVICFRDGSPPLPDASTNALQGLELGRFFNGSFERA 126
Query: 132 EDIQNEEQCYPMQKNISVKLTNEQISPGAWYLGFFNGVGAIRTQSKMIIRGPSYSFTANI 191
+D + +QCYPMQKNI+++LTNEQISPGAWY+G FNG+GA RTQ KMI+R ++SF+ANI
Sbjct: 127 QDSEIAQQCYPMQKNITLRLTNEQISPGAWYVGLFNGIGATRTQGKMIVRSSAFSFSANI 186
Query: 192 SVEGCTTSTMWGQYCNQSVDPLSCVRSDSYNLTEQFPDSKLNNKTTENGIFCRNSFDSPC 251
SVEGC T+TMWG +CNQ++ PLSC R D N+T + I C +SF S C
Sbjct: 187 SVEGCKTATMWGPFCNQTIYPLSCSRFD--------------NQTA-SVISCADSFPSSC 231
Query: 252 HGNGEIKVFFLDVLGIAEQLIIMAMNVTFSMTQSNNTLNAGGANIVCFARHGAMPSEILH 311
E K + LDV GIAEQL+IMA NV SN + ++C+AR A SE LH
Sbjct: 232 LTGAETKTYALDVDGIAEQLVIMASNVK---VDSNESY------LMCYARFEAFASETLH 282
Query: 312 DYSGDISNGPLIVDSPKVGRWYITIIPVNLSKELGETRNAGIQVCYSLEWQVLECPMGKA 371
DY+ DI PLIV+ PK GRWYI I + N+ +VC+S+ +VL CP+GKA
Sbjct: 283 DYAADIHKVPLIVNKPKAGRWYIVISLSGRENRFAQGTNSSSRVCFSINVKVLGCPVGKA 342
Query: 372 GLNCKWERYILQTVIRKETL--FESYYIPVSEKVPSDSAA-FPLEPLLSN-SSYDEGQDN 427
G NC + YILQ V+R+ L F+SYY PV++ S S+ FPLEP++SN SS E +
Sbjct: 343 GPNCGQQIYILQAVMRRGWLTPFQSYYFPVNDASLSGSSTNFPLEPIVSNFSSIPELDTS 402
Query: 428 TWTYFLLDIPRGAAGGSIHIQLTSDTKIKHEIYAKSGGLPSLQSWDYYYANRTNNSVGSM 487
TWTYFL++IP+G +GG IH +L SD+ I++E+Y + GGLP++ DYYY NRT+ S SM
Sbjct: 403 TWTYFLMNIPQGGSGGHIHFRLLSDSTIQYEVYLRFGGLPTIDDRDYYYVNRTSAS-RSM 461
Query: 488 FFKLYNSSEEKVDFYILYVREGTWGFGIRHV---NT---SK-SETVMSVSLERCPKRCSS 540
FF LYNSS+E VDFYILY REGTW FG+R + NT S+ S T++S+SLERCP+ CSS
Sbjct: 462 FFSLYNSSKEMVDFYILYAREGTWSFGLRQLIDSNTPAASRGSPTLVSLSLERCPRGCSS 521
Query: 541 HGQCRNAFDASGLTLYSFCACDRDHGGFDCSVELVSHRGHVQQSVALIASNAAALLPAYQ 600
+GQCR AFDA+GLT YSFC+CDR HGGFDCS+E+VSH+ H+ QS+ALIASNAAALLPAY
Sbjct: 522 YGQCRYAFDANGLTSYSFCSCDRTHGGFDCSIEIVSHQEHIVQSIALIASNAAALLPAYW 581
Query: 601 ALRQKAFAEWVLFTASGISSGLYHACDVGTWCALSFNVLQFMDFWLSFMAVVSTFIYLTT 660
ALRQ+ + EWVLFT+SGISS LYHACDVGTWC LS+NVLQFMDFWLSFMAVV TF+YL+T
Sbjct: 582 ALRQREYPEWVLFTSSGISSALYHACDVGTWCVLSYNVLQFMDFWLSFMAVVGTFVYLST 641
Query: 661 IDEALKRTIHTVVAILTAMMAITKATRSSNXXXXXXXXXXXXXXXXXXXXXTKFRSFSLR 720
EA+KRTIHTVVAILTA++A+T+ATR+SN TK+RS+
Sbjct: 642 AGEAVKRTIHTVVAILTALLALTQATRASNIIIVLAIGSLGLLIGFLVEFVTKYRSYCGS 701
Query: 721 FGFCMNMVDRQQTIMEWLRNFMKTILRRFRWGFVLVGFAALAMAAISWKLETSQSYWIWH 780
GF +NM+DR + + EW N +KT+ +RFRWGFV G A MAAIS+K+ETS SYW+WH
Sbjct: 702 AGFSLNMLDRPRAVKEWFSNLIKTLKKRFRWGFVAAGLVAFTMAAISFKVETSSSYWMWH 761
Query: 781 SIWHVSIYTSSFFFLCSKVSSLNSEN--QRPLDGTYELTRQDSMPR 824
SIWH +IYTSSFFFLCSK++ +N EN D YELTRQDS+ R
Sbjct: 762 SIWHFTIYTSSFFFLCSKIAIVNHENLAHNGADN-YELTRQDSLSR 806
>UNIPROTKB|A6NDV4 [details] [associations]
symbol:TMEM8B "Transmembrane protein 8B" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0040008 "regulation of growth" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IMP] [GO:0007346 "regulation of
mitotic cell cycle" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009986 "cell surface" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 GO:GO:0005783 GO:GO:0016021 GO:GO:0005739
GO:GO:0005886 GO:GO:0005634 GO:GO:0007346 GO:GO:0009986
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0040008 EMBL:CH471071
PROSITE:PS01186 GO:GO:0007160 EMBL:AL133410 eggNOG:NOG77604
InterPro:IPR021910 Pfam:PF12036 CTD:51754 EMBL:AF149297
EMBL:AF188239 EMBL:AF070572 EMBL:AK074844 EMBL:BC041377
EMBL:BC098265 EMBL:BC098296 EMBL:BC099733 IPI:IPI00415061
IPI:IPI00513780 IPI:IPI00894263 RefSeq:NP_001036054.1
RefSeq:NP_001036055.1 RefSeq:NP_057530.2 UniGene:Hs.493808
ProteinModelPortal:A6NDV4 MINT:MINT-2873602 STRING:A6NDV4
PRIDE:A6NDV4 Ensembl:ENST00000377988 Ensembl:ENST00000377991
Ensembl:ENST00000377996 Ensembl:ENST00000439587 GeneID:51754
KEGG:hsa:51754 UCSC:uc003zyk.3 UCSC:uc003zym.3
GeneCards:GC09P035814 HGNC:HGNC:21427 neXtProt:NX_A6NDV4
PharmGKB:PA165586305 OMA:TIAIRSH ChiTaRS:TMEM8B GenomeRNAi:51754
NextBio:55850 ArrayExpress:A6NDV4 Bgee:A6NDV4 CleanEx:HS_C9orf127
Genevestigator:A6NDV4 Uniprot:A6NDV4
Length = 472
Score = 183 (69.5 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 54/192 (28%), Positives = 90/192 (46%)
Query: 503 ILYVREGTW--------GFGIRHVN--TSKSETVMSVSLERCPKRCSSHGQCRNAFDASG 552
I + + GTW G G R V + +E M L C C +GQC+ +
Sbjct: 145 IPFPQTGTWFLALRSLCGVGPRFVRCRNATAEVRMRTFLSPCVDDCGPYGQCKLLRTHN- 203
Query: 553 LTLYSFCACDRDHGGFDC--SVELVSHRGHVQQSVALIASNAAALLPAYQALRQKAFAEW 610
LY+ C C G+ C S + +++ + ++ L SN L P A+R + E
Sbjct: 204 -YLYAACECKAGWRGWGCTDSADALTYGFQLLSTLLLCLSNLMFLPPVVLAIRSRYVLEA 262
Query: 611 VLFTASGISSGLYHACD---VGTWCALSFNVLQFMDFWLSFMAVVSTFIYLTTIDEALKR 667
++T + S YHACD + +C + ++VLQF DF S M+V T I + + +K+
Sbjct: 263 AVYTFTMFFSTFYHACDQPGIVVFCIMDYDVLQFCDFLGSLMSVWVTVIAMARLQPVVKQ 322
Query: 668 TIHTVVAILTAM 679
++ + A+L +M
Sbjct: 323 VLYLLGAMLLSM 334
Score = 67 (28.6 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 750 RWGFVLVGFAALAMAAISWK--LETSQSYWIWHSIWHVSIYTSSFFFL 795
RW F L + +A +A+ +ET +Y+ HSIWH+ I S F L
Sbjct: 378 RWLFYLCPGSLIAGSAVLLYAFVETRDNYFYIHSIWHMLIAGSVGFLL 425
>MGI|MGI:2441680 [details] [associations]
symbol:Tmem8b "transmembrane protein 8B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0040008 "regulation of
growth" evidence=IEA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 MGI:MGI:2441680 GO:GO:0005783 GO:GO:0016021
GO:GO:0005739 GO:GO:0005886 GO:GO:0005634 GO:GO:0009986
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0040008 PROSITE:PS01186
GO:GO:0007160 EMBL:AL732626 eggNOG:NOG77604 InterPro:IPR021910
Pfam:PF12036 GeneTree:ENSGT00390000004668 HOGENOM:HOG000049225
CTD:51754 OrthoDB:EOG4X0MRR EMBL:BC147569 EMBL:BC147574
EMBL:BC151067 EMBL:BC151070 IPI:IPI00466737 RefSeq:NP_001078977.1
UniGene:Mm.171489 PRIDE:B1AWJ5 Ensembl:ENSMUST00000107864
Ensembl:ENSMUST00000107865 Ensembl:ENSMUST00000167153 GeneID:242409
KEGG:mmu:242409 InParanoid:B1AWJ5 NextBio:385329 Bgee:B1AWJ5
Genevestigator:B1AWJ5 Uniprot:B1AWJ5
Length = 472
Score = 181 (68.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 53/192 (27%), Positives = 90/192 (46%)
Query: 503 ILYVREGTW--------GFGIRHVN--TSKSETVMSVSLERCPKRCSSHGQCRNAFDASG 552
I + + GTW G G R V + +E + L C C +GQC+ +
Sbjct: 145 IPFPQTGTWFLTLRSLCGVGPRFVRCRNATAEVRLRTFLSPCVDDCGPYGQCKLLRTHN- 203
Query: 553 LTLYSFCACDRDHGGFDC--SVELVSHRGHVQQSVALIASNAAALLPAYQALRQKAFAEW 610
LY+ C C G+ C S + +++ + ++ L SN L P A+R + E
Sbjct: 204 -YLYAACECKAGWRGWGCTDSADALTYGFQLLSTLLLCLSNLMFLPPVVLAIRSRYVLEA 262
Query: 611 VLFTASGISSGLYHACD---VGTWCALSFNVLQFMDFWLSFMAVVSTFIYLTTIDEALKR 667
++T + S YHACD + +C + ++VLQF DF S M+V T I + + +K+
Sbjct: 263 AVYTFTMFFSTFYHACDQPGIVVFCIMDYDVLQFCDFLGSLMSVWVTVIAMARLQPVIKQ 322
Query: 668 TIHTVVAILTAM 679
++ + A+L +M
Sbjct: 323 VLYLLGAMLLSM 334
Score = 67 (28.6 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 750 RWGFVLVGFAALAMAAISWK--LETSQSYWIWHSIWHVSIYTSSFFFL 795
RW F L + +A +A+ +ET +Y+ HSIWH+ I S F L
Sbjct: 378 RWLFYLCPGSLIAGSAVLLYAFVETRDNYFYIHSIWHMLIAGSVGFLL 425
>UNIPROTKB|A6QLK4 [details] [associations]
symbol:TMEM8B "Transmembrane protein 8B" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0009986 "cell
surface" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0040008 "regulation of growth" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000742
PROSITE:PS50026 SMART:SM00181 GO:GO:0005783 GO:GO:0016021
GO:GO:0005739 GO:GO:0005886 GO:GO:0005634 GO:GO:0009986
InterPro:IPR013032 PROSITE:PS00022 GO:GO:0040008 PROSITE:PS01186
GO:GO:0007160 eggNOG:NOG77604 InterPro:IPR021910 Pfam:PF12036
HOGENOM:HOG000049225 EMBL:BC147996 EMBL:BC149881 IPI:IPI00709200
RefSeq:NP_001096805.1 UniGene:Bt.31084 GeneID:100125302
KEGG:bta:100125302 CTD:51754 InParanoid:A6QLK4 OrthoDB:EOG4X0MRR
NextBio:20788803 Uniprot:A6QLK4
Length = 472
Score = 180 (68.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 53/192 (27%), Positives = 90/192 (46%)
Query: 503 ILYVREGTW--------GFGIRHVN--TSKSETVMSVSLERCPKRCSSHGQCRNAFDASG 552
I + + GTW G G R V + +E + L C C +GQC+ +
Sbjct: 145 IPFPQTGTWFLTLRSLCGVGPRFVRCRNATAEVRLRTFLSPCVDDCGPYGQCKLLRTHN- 203
Query: 553 LTLYSFCACDRDHGGFDC--SVELVSHRGHVQQSVALIASNAAALLPAYQALRQKAFAEW 610
LY+ C C G+ C S + +++ + ++ L SN L P A+R + E
Sbjct: 204 -YLYAACECKAGWRGWGCTDSADALTYGFQLLSTLLLCLSNLMFLPPVVLAIRSRYVLEA 262
Query: 611 VLFTASGISSGLYHACD---VGTWCALSFNVLQFMDFWLSFMAVVSTFIYLTTIDEALKR 667
++T + S YHACD + +C + ++VLQF DF S M+V T I + + +K+
Sbjct: 263 AVYTFTMFFSTFYHACDQPGIVVFCIMDYDVLQFCDFLGSLMSVWVTVIAMARLQPVVKQ 322
Query: 668 TIHTVVAILTAM 679
++ + A+L +M
Sbjct: 323 VLYLLGAMLLSM 334
Score = 68 (29.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 750 RWGFVLVGFAALAMAAISWK--LETSQSYWIWHSIWHVSIYTSSFFFL 795
RW F L + +A +AI +ET +Y+ HSIWH+ I S F L
Sbjct: 378 RWLFCLCPGSLIAGSAILLYAFVETRDNYFYIHSIWHMLIAGSVGFLL 425
>UNIPROTKB|F1STB0 [details] [associations]
symbol:TMEM8B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009986 "cell surface" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR000742 SMART:SM00181 GO:GO:0005886
GO:GO:0009986 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0007160 InterPro:IPR021910 Pfam:PF12036
GeneTree:ENSGT00390000004668 OMA:VTEYFTR EMBL:CU074289
Ensembl:ENSSSCT00000005864 Uniprot:F1STB0
Length = 779
Score = 180 (68.4 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 53/192 (27%), Positives = 90/192 (46%)
Query: 503 ILYVREGTW--------GFGIRHVN--TSKSETVMSVSLERCPKRCSSHGQCRNAFDASG 552
I + + GTW G G R V + +E + L C C +GQC+ +
Sbjct: 452 IPFPQTGTWFLTLRSLCGVGPRFVRCRNATAEVRLRTFLSPCVDDCGPYGQCKLLRTHN- 510
Query: 553 LTLYSFCACDRDHGGFDC--SVELVSHRGHVQQSVALIASNAAALLPAYQALRQKAFAEW 610
LY+ C C G+ C S + +++ + ++ L SN L P A+R + E
Sbjct: 511 -YLYAACECKAGWRGWGCTDSADALTYGFQLLSTLLLCLSNLMFLPPVVLAIRSRYVLEA 569
Query: 611 VLFTASGISSGLYHACD---VGTWCALSFNVLQFMDFWLSFMAVVSTFIYLTTIDEALKR 667
++T + S YHACD + +C + ++VLQF DF S M+V T I + + +K+
Sbjct: 570 AVYTFTMFFSTFYHACDQPGIVVFCIMDYDVLQFCDFLGSLMSVWVTVIAMARLQPVVKQ 629
Query: 668 TIHTVVAILTAM 679
++ + A+L +M
Sbjct: 630 VLYLLGAMLLSM 641
Score = 67 (28.6 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 750 RWGFVLVGFAALAMAAISWK--LETSQSYWIWHSIWHVSIYTSSFFFL 795
RW F L + +A +A+ +ET +Y+ HSIWH+ I S F L
Sbjct: 685 RWLFYLCPGSLIAGSAVLLYAFVETRDNYFYIHSIWHMLIAGSVGFLL 732
Score = 39 (18.8 bits), Expect = 3.1e-11, Sum P(3) = 3.1e-11
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 65 LPPWFSSLSIVLESDVDLDARSIAKVPESALPLICLRDGSLPLPQVTNAFVKGLVL 120
LPPW + + +E+ R+I +C+R P P ++ A V G +
Sbjct: 260 LPPWGHWVYVRVETPSRGPGRTIRFQ-------LCVRLQECPQPSLSRALVPGAAM 308
Score = 38 (18.4 bits), Expect = 6.8e-11, Sum P(4) = 6.8e-11
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 429 WTYFLLDIPRGAAGGSIHIQL 449
W Y ++ P G +I QL
Sbjct: 266 WVYVRVETPSRGPGRTIRFQL 286
Score = 38 (18.4 bits), Expect = 6.8e-11, Sum P(4) = 6.8e-11
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 318 SNGPLIVDSPKVGRWYITIIPVNLSKELGETRNAGIQ-VC-YSLEWQVL 364
++G V SP G W++ +L + G G+Q C Y L+ Q++
Sbjct: 127 TSGIFNVSSPLPGDWFLA---AHLPQAHGHISVKGLQDECQYLLQPQLI 172
>RGD|1310012 [details] [associations]
symbol:Tmem8b "transmembrane protein 8B" species:10116 "Rattus
norvegicus" [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007160 "cell-matrix adhesion" evidence=IEA;ISO] [GO:0009986
"cell surface" evidence=IEA;ISO] InterPro:IPR000742 SMART:SM00181
RGD:1310012 GO:GO:0005886 GO:GO:0009986 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 GO:GO:0007160 InterPro:IPR021910
Pfam:PF12036 GeneTree:ENSGT00390000004668 OrthoDB:EOG4X0MRR
IPI:IPI00358755 Ensembl:ENSRNOT00000021227 UCSC:RGD:1310012
NextBio:666249 Uniprot:D4AD81
Length = 892
Score = 181 (68.8 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 53/192 (27%), Positives = 90/192 (46%)
Query: 503 ILYVREGTW--------GFGIRHVN--TSKSETVMSVSLERCPKRCSSHGQCRNAFDASG 552
I + + GTW G G R V + +E + L C C +GQC+ +
Sbjct: 565 IPFPQTGTWFLTLRSLCGVGPRFVRCRNATAEVRLRTFLSPCVDDCGPYGQCKLLRTHN- 623
Query: 553 LTLYSFCACDRDHGGFDC--SVELVSHRGHVQQSVALIASNAAALLPAYQALRQKAFAEW 610
LY+ C C G+ C S + +++ + ++ L SN L P A+R + E
Sbjct: 624 -YLYAACECKAGWRGWGCTDSADALTYGFQLLSTLLLCLSNLMFLPPVVLAIRSRYVLEA 682
Query: 611 VLFTASGISSGLYHACD---VGTWCALSFNVLQFMDFWLSFMAVVSTFIYLTTIDEALKR 667
++T + S YHACD + +C + ++VLQF DF S M+V T I + + +K+
Sbjct: 683 AVYTFTMFFSTFYHACDQPGIVVFCIMDYDVLQFCDFLGSLMSVWVTVIAMARLQPVIKQ 742
Query: 668 TIHTVVAILTAM 679
++ + A+L +M
Sbjct: 743 VLYLLGAMLLSM 754
Score = 67 (28.6 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 750 RWGFVLVGFAALAMAAISWK--LETSQSYWIWHSIWHVSIYTSSFFFL 795
RW F L + +A +A+ +ET +Y+ HSIWH+ I S F L
Sbjct: 798 RWLFYLCPGSLIAGSAVLLYAFVETRDNYFYIHSIWHMLIAGSVGFLL 845
Score = 39 (18.8 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 14/56 (25%), Positives = 24/56 (42%)
Query: 65 LPPWFSSLSIVLESDVDLDARSIAKVPESALPLICLRDGSLPLPQVTNAFVKGLVL 120
LPPW + + +E+ +R + L C+R P P ++ A V G +
Sbjct: 373 LPPWGHWVYVRVETP----SRGPGRTVRFQL---CVRLQECPQPSLSRALVPGAAM 421
Score = 38 (18.4 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 318 SNGPLIVDSPKVGRWYITIIPVNLSKELGETRNAGIQ-VC-YSLEWQVL 364
++G V SP G W++ +L + G G+Q C Y L+ Q++
Sbjct: 240 TSGIFNVSSPLPGDWFLA---AHLPQAHGHISVKGLQDECQYLLQPQLI 285
Score = 37 (18.1 bits), Expect = 1.4e-10, Sum P(4) = 1.4e-10
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 429 WTYFLLDIPRGAAGGSIHIQL 449
W Y ++ P G ++ QL
Sbjct: 379 WVYVRVETPSRGPGRTVRFQL 399
>UNIPROTKB|F1MLC4 [details] [associations]
symbol:TMEM8B "Transmembrane protein 8B" species:9913 "Bos
taurus" [GO:0009986 "cell surface" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR000742 SMART:SM00181 GO:GO:0005886
GO:GO:0009986 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
GO:GO:0007160 InterPro:IPR021910 Pfam:PF12036
GeneTree:ENSGT00390000004668 IPI:IPI00709200 EMBL:DAAA02023134
Ensembl:ENSBTAT00000015212 OMA:VTEYFTR Uniprot:F1MLC4
Length = 744
Score = 180 (68.4 bits), Expect = 4.2e-11, Sum P(4) = 4.2e-11
Identities = 53/192 (27%), Positives = 90/192 (46%)
Query: 503 ILYVREGTW--------GFGIRHVN--TSKSETVMSVSLERCPKRCSSHGQCRNAFDASG 552
I + + GTW G G R V + +E + L C C +GQC+ +
Sbjct: 417 IPFPQTGTWFLTLRSLCGVGPRFVRCRNATAEVRLRTFLSPCVDDCGPYGQCKLLRTHN- 475
Query: 553 LTLYSFCACDRDHGGFDC--SVELVSHRGHVQQSVALIASNAAALLPAYQALRQKAFAEW 610
LY+ C C G+ C S + +++ + ++ L SN L P A+R + E
Sbjct: 476 -YLYAACECKAGWRGWGCTDSADALTYGFQLLSTLLLCLSNLMFLPPVVLAIRSRYVLEA 534
Query: 611 VLFTASGISSGLYHACD---VGTWCALSFNVLQFMDFWLSFMAVVSTFIYLTTIDEALKR 667
++T + S YHACD + +C + ++VLQF DF S M+V T I + + +K+
Sbjct: 535 AVYTFTMFFSTFYHACDQPGIVVFCIMDYDVLQFCDFLGSLMSVWVTVIAMARLQPVVKQ 594
Query: 668 TIHTVVAILTAM 679
++ + A+L +M
Sbjct: 595 VLYLLGAMLLSM 606
Score = 68 (29.0 bits), Expect = 4.2e-11, Sum P(4) = 4.2e-11
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 750 RWGFVLVGFAALAMAAISWK--LETSQSYWIWHSIWHVSIYTSSFFFL 795
RW F L + +A +AI +ET +Y+ HSIWH+ I S F L
Sbjct: 650 RWLFCLCPGSLIAGSAILLYAFVETRDNYFYIHSIWHMLIAGSVGFLL 697
Score = 38 (18.4 bits), Expect = 4.2e-11, Sum P(4) = 4.2e-11
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 429 WTYFLLDIPRGAAGGSIHIQL 449
W Y ++ P G +I QL
Sbjct: 231 WVYVRVETPSRGPGRTIRFQL 251
Score = 38 (18.4 bits), Expect = 4.2e-11, Sum P(4) = 4.2e-11
Identities = 14/49 (28%), Positives = 24/49 (48%)
Query: 318 SNGPLIVDSPKVGRWYITIIPVNLSKELGETRNAGIQ-VC-YSLEWQVL 364
++G V SP G W++ +L + G G+Q C Y L+ Q++
Sbjct: 92 TSGIFNVSSPLPGDWFLA---AHLPQAHGHISVKGLQDECQYLLQPQLI 137
>UNIPROTKB|K4DI83 [details] [associations]
symbol:TMEM8A "Transmembrane protein 8 (Five
membrane-spanning domains), isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 GO:GO:0016021
EMBL:CH471112 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
EMBL:Z97634 HGNC:HGNC:17205 InterPro:IPR021910 Pfam:PF12036
Ensembl:ENST00000250930 Uniprot:K4DI83
Length = 578
Score = 138 (53.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 59/257 (22%), Positives = 108/257 (42%)
Query: 441 AGGSIHIQLTSD-TKIKHEIYAKSGGLPSLQSWDYYYANRTNNSVGSMFFKLYNSS---- 495
+GGS+ I L ++ T++++E + + + + T+ + + FF+ Y S
Sbjct: 203 SGGSLTISLRANKTEMRNETVV----VACVNAASPFLGFNTSLNCTTAFFQGYPLSLSAW 258
Query: 496 EEKVDFYILYVREGTWGFGIRHVNTSKSE----TVMSVS----LERCPKRCSSHGQCRNA 547
+ + I Y W ++ + +E V+ V L C C +GQC
Sbjct: 259 SRRANLIIPYPETDNWYLSLQLMCPENAEDCEQAVVHVETTLYLVPCLNDCGPYGQCLLL 318
Query: 548 FDASGLTLYSFCACDRDHGGFDCSVELVSHRGHVQQSVALIA--SNAAALLPAYQALRQK 605
S LY+ C+C G+ C+ + Q++ L+ SN L P ++R+
Sbjct: 319 RRHS--YLYASCSCKAGWRGWSCTDNSTAQTVAQQRAATLLLTLSNLMFLAPIAVSVRRF 376
Query: 606 AFAEWVLFTASGISSGLYHACDV---GTWCALSFNVLQFMDFWLSFMAVVSTFIYLTTID 662
E ++ + S YHACD C LS++ LQ+ DF S A+ T + + +
Sbjct: 377 FLVEASVYAYTMFFSTFYHACDQPGEAVLCILSYDTLQYCDFLGSGAAIWVTILCMARLK 436
Query: 663 EALKRTIHTVVAILTAM 679
LK + + ++ AM
Sbjct: 437 TVLKYVLFLLGTLVIAM 453
Score = 77 (32.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 750 RWGFVLVGFAALAMA--AISWKLETSQSYWIWHSIWHVSIYTSSFFFL 795
RW F L+ ++A AI + TS +Y+ HSIWH+ + S+ L
Sbjct: 497 RWAFYLLPGVSMASVGIAIYTSMMTSDNYYYTHSIWHILLAGSAALLL 544
>UNIPROTKB|Q9HCN3 [details] [associations]
symbol:TMEM8A "Transmembrane protein 8A" species:9606 "Homo
sapiens" [GO:0007155 "cell adhesion" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181
GO:GO:0005887 GO:GO:0007155 EMBL:CH471112 InterPro:IPR013032
PROSITE:PS00022 PROSITE:PS01186 EMBL:AE006463 EMBL:Z97634
EMBL:AB045292 EMBL:BC021557 EMBL:BC004276 EMBL:AK024725
IPI:IPI00289131 PIR:JC7388 RefSeq:NP_067082.2 UniGene:Hs.288940
ProteinModelPortal:Q9HCN3 STRING:Q9HCN3 PhosphoSite:Q9HCN3
DMDM:296453013 PaxDb:Q9HCN3 PRIDE:Q9HCN3 DNASU:58986
Ensembl:ENST00000431232 GeneID:58986 KEGG:hsa:58986 UCSC:uc002cgu.4
CTD:58986 GeneCards:GC16M000360 H-InvDB:HIX0202255 HGNC:HGNC:17205
neXtProt:NX_Q9HCN3 PharmGKB:PA38211 eggNOG:NOG77604
InParanoid:Q9HCN3 OMA:EITVHFR OrthoDB:EOG4H9XK4 PhylomeDB:Q9HCN3
GenomeRNAi:58986 NextBio:65130 ArrayExpress:Q9HCN3 Bgee:Q9HCN3
CleanEx:HS_TMEM8 Genevestigator:Q9HCN3 GermOnline:ENSG00000129925
InterPro:IPR021910 Pfam:PF12036 Uniprot:Q9HCN3
Length = 771
Score = 138 (53.6 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 59/257 (22%), Positives = 108/257 (42%)
Query: 441 AGGSIHIQLTSD-TKIKHEIYAKSGGLPSLQSWDYYYANRTNNSVGSMFFKLYNSS---- 495
+GGS+ I L ++ T++++E + + + + T+ + + FF+ Y S
Sbjct: 396 SGGSLTISLRANKTEMRNETVV----VACVNAASPFLGFNTSLNCTTAFFQGYPLSLSAW 451
Query: 496 EEKVDFYILYVREGTWGFGIRHVNTSKSE----TVMSVS----LERCPKRCSSHGQCRNA 547
+ + I Y W ++ + +E V+ V L C C +GQC
Sbjct: 452 SRRANLIIPYPETDNWYLSLQLMCPENAEDCEQAVVHVETTLYLVPCLNDCGPYGQCLLL 511
Query: 548 FDASGLTLYSFCACDRDHGGFDCSVELVSHRGHVQQSVALIA--SNAAALLPAYQALRQK 605
S LY+ C+C G+ C+ + Q++ L+ SN L P ++R+
Sbjct: 512 RRHS--YLYASCSCKAGWRGWSCTDNSTAQTVAQQRAATLLLTLSNLMFLAPIAVSVRRF 569
Query: 606 AFAEWVLFTASGISSGLYHACDV---GTWCALSFNVLQFMDFWLSFMAVVSTFIYLTTID 662
E ++ + S YHACD C LS++ LQ+ DF S A+ T + + +
Sbjct: 570 FLVEASVYAYTMFFSTFYHACDQPGEAVLCILSYDTLQYCDFLGSGAAIWVTILCMARLK 629
Query: 663 EALKRTIHTVVAILTAM 679
LK + + ++ AM
Sbjct: 630 TVLKYVLFLLGTLVIAM 646
Score = 77 (32.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 750 RWGFVLVGFAALAMA--AISWKLETSQSYWIWHSIWHVSIYTSSFFFL 795
RW F L+ ++A AI + TS +Y+ HSIWH+ + S+ L
Sbjct: 690 RWAFYLLPGVSMASVGIAIYTSMMTSDNYYYTHSIWHILLAGSAALLL 737
>MGI|MGI:1926283 [details] [associations]
symbol:Tmem8 "transmembrane protein 8 (five
membrane-spanning domains)" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005887 "integral
to plasma membrane" evidence=NAS] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000742 PROSITE:PS50026
SMART:SM00181 MGI:MGI:1926283 GO:GO:0005887 GO:GO:0007155
InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186 eggNOG:NOG77604
OMA:EITVHFR OrthoDB:EOG4H9XK4 InterPro:IPR021910 Pfam:PF12036
EMBL:AB045293 EMBL:AK044384 EMBL:BC005722 IPI:IPI00113425
IPI:IPI00230260 RefSeq:NP_068565.1 UniGene:Mm.304656
PhosphoSite:Q9ESN3 PRIDE:Q9ESN3 Ensembl:ENSMUST00000025010
GeneID:60455 KEGG:mmu:60455 UCSC:uc008bdj.2 UCSC:uc008bdk.1
CTD:60455 GeneTree:ENSGT00390000004668 HOGENOM:HOG000049225
InParanoid:Q543X8 NextBio:314875 Bgee:Q9ESN3 Genevestigator:Q9ESN3
GermOnline:ENSMUSG00000024180 Uniprot:Q9ESN3
Length = 769
Score = 128 (50.1 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 42/161 (26%), Positives = 71/161 (44%)
Query: 524 ETVMSVSLERCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVELVSHRGHVQQ 583
ET++ L C C +GQC G +Y+ C+C G+ C+ + Q+
Sbjct: 488 ETILY--LVPCLNDCGPYGQCL-LLRRYGY-VYAGCSCKAGWRGWSCTDNSTAQTVAQQR 543
Query: 584 SVALIA--SNAAALLPAYQALRQKAFAEWVLFTASGISSGLYHACDV---GTWCALSFNV 638
+ AL+ SN L P +L + E ++ + S YHACD C LS++
Sbjct: 544 AAALLLTLSNLMFLAPIAISLHRSFLVEASVYFYTMFFSTFYHACDQPGEAVLCILSYDT 603
Query: 639 LQFMDFWLSFMAVVSTFIYLTTIDEALKRTIHTVVAILTAM 679
LQ+ DF S + T + + + LK+ + + ++ AM
Sbjct: 604 LQYCDFLGSGASTWVTILCMARLKTILKQVLLVLGTLVIAM 644
Score = 79 (32.9 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 750 RWGFVLVGFAALAMAAISW--KLETSQSYWIWHSIWHVSIYTSSFFFL 795
RW F L+ ++A I+ + TS +Y+ HSIWH+ + S+ F L
Sbjct: 688 RWVFYLLPGISMASVGIAMYTSMMTSDNYYYTHSIWHILLAGSAAFLL 735
Score = 45 (20.9 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 14/37 (37%), Positives = 23/37 (62%)
Query: 68 WFSSLSIVL-ESDVDLDARSIAKVPESALPLI-CLRD 102
W+ SL +V ES D + +++ +V E+ L L+ CL D
Sbjct: 465 WYLSLQLVCPESPEDCE-QAVVRV-ETILYLVPCLND 499
Score = 39 (18.8 bits), Expect = 6.0e-07, Sum P(3) = 6.0e-07
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 322 LIVDSPKVGRWYITIIPVNLSKE---LGETRNAGIQVCYSLEWQV 363
L++ SP GRW + + +L++ +G T A VC W V
Sbjct: 265 LLLSSPPWGRW-LQVTFESLAEPHVTVGFTAKAVFTVCRP--WSV 306
>RGD|1311395 [details] [associations]
symbol:Tmem8a "transmembrane protein 8A" species:10116 "Rattus
norvegicus" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR000742 PROSITE:PS50026 SMART:SM00181 RGD:1311395
GO:GO:0016021 InterPro:IPR013032 PROSITE:PS00022 PROSITE:PS01186
EMBL:CH473948 CTD:58986 OMA:EITVHFR OrthoDB:EOG4H9XK4
InterPro:IPR021910 Pfam:PF12036 GeneTree:ENSGT00390000004668
EMBL:AC126071 IPI:IPI00203941 RefSeq:NP_001100461.1
UniGene:Rn.21890 Ensembl:ENSRNOT00000027609 GeneID:303004
KEGG:rno:303004 UCSC:RGD:1311395 NextBio:650549 Uniprot:D3ZKI8
Length = 772
Score = 133 (51.9 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 44/164 (26%), Positives = 73/164 (44%)
Query: 524 ETVMSVSLERCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVELVSHRGHVQQ 583
ETV+ L C C +GQC G LY+ C+C G+ C+ + Q+
Sbjct: 491 ETVLY--LVPCLNDCGPYGQCL-LLRRYGY-LYAGCSCKAGWRGWSCTDNSTAQTAAQQR 546
Query: 584 SVALIA--SNAAALLPAYQALRQKAFAEWVLFTASGISSGLYHACDV---GTWCALSFNV 638
+ AL+ SN L P ++ + E ++ + S YHACD C LS++
Sbjct: 547 AAALLLTLSNLMFLAPIAISVHRSFLVEASVYFYTMFFSTFYHACDQPGEAVLCILSYDT 606
Query: 639 LQFMDFWLSFMAVVSTFIYLTTIDEALKRTIHTVVAILTAMMAI 682
LQ+ DF S + T + + + LK+ + V+ +L M++
Sbjct: 607 LQYCDFLGSGASTWVTILCMARLKTILKQVL-LVLGLLVIAMSL 649
Score = 77 (32.2 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 750 RWGFVLVGFAALAMAAISW--KLETSQSYWIWHSIWHVSIYTSSFFFL 795
RW F L+ ++A I+ + TS +Y+ HSIWH+ + S F L
Sbjct: 691 RWVFYLLPGISMAFVGIAMYTSMMTSDNYYYTHSIWHILLAGSVAFLL 738
Score = 40 (19.1 bits), Expect = 2.3e-07, Sum P(3) = 2.3e-07
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 322 LIVDSPKVGRWYITIIPVNLSKE---LGETRNAGIQVCYSLEWQV 363
L++ SP GRW + + +L++ +G T A C W V
Sbjct: 265 LLLSSPPWGRW-LQVTVESLAEPHVTVGFTAKAAFTACRP--WSV 306
Score = 39 (18.8 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 51 TRLRPFDSRYFRVDLPPWFSSLSIVLES 78
T L PF + + PPW L + +ES
Sbjct: 257 TGLAPFC--HLLLSSPPWGRWLQVTVES 282
Score = 38 (18.4 bits), Expect = 4.9e-07, Sum P(4) = 4.9e-07
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 322 LIVDSPKVGRWYITI 336
LI+ P+ WY+++
Sbjct: 458 LIIPYPETDNWYLSL 472
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.135 0.419 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 838 817 0.0010 121 3 11 22 0.50 33
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 632 (67 KB)
Total size of DFA: 449 KB (2212 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 70.91u 0.17s 71.08t Elapsed: 00:00:03
Total cpu time: 70.91u 0.17s 71.08t Elapsed: 00:00:03
Start: Sat May 11 08:09:43 2013 End: Sat May 11 08:09:46 2013