Query 003218
Match_columns 838
No_of_seqs 127 out of 152
Neff 3.8
Searched_HMMs 13730
Date Mon Mar 25 17:33:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003218.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/003218hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g1ta2 g.3.11.1 (A:119-157) E 94.3 0.0067 4.9E-07 44.9 1.6 36 532-573 2-38 (39)
2 d1jv2b4 g.3.11.6 (B:532-562) I 93.2 0.0084 6.2E-07 42.6 0.3 25 537-571 4-28 (31)
3 d2vj3a2 g.3.11.1 (A:453-491) N 92.7 0.027 2E-06 41.6 2.5 36 532-573 2-38 (39)
4 d1edmb_ g.3.11.1 (B:) Factor I 92.6 0.031 2.3E-06 41.1 2.7 35 531-571 3-38 (39)
5 d1k36a_ g.3.11.1 (A:) Epiregul 92.4 0.036 2.6E-06 42.4 2.9 39 529-572 1-43 (46)
6 d1tpga1 g.3.11.1 (A:51-91) Pla 92.3 0.069 5E-06 39.6 4.4 36 535-574 3-38 (41)
7 d2vj3a1 g.3.11.1 (A:411-452) N 92.1 0.039 2.9E-06 40.9 2.7 32 535-572 10-41 (42)
8 d1g1sa2 g.3.11.1 (A:119-158) E 91.7 0.031 2.2E-06 41.4 1.8 35 532-572 2-37 (40)
9 d1l3ya_ g.3.11.6 (A:) Integrin 90.9 0.039 2.8E-06 41.5 1.6 25 537-571 14-40 (41)
10 d1autl1 g.3.11.1 (L:49-96) Act 90.0 0.062 4.5E-06 41.4 2.1 36 532-574 9-45 (48)
11 d1xkba1 g.3.11.1 (A:48-86) Fac 89.5 0.073 5.3E-06 39.2 2.1 34 533-572 2-36 (39)
12 d2vj3a3 g.3.11.1 (A:492-526) N 89.4 0.092 6.7E-06 37.7 2.5 32 533-570 2-34 (35)
13 d2c4fl1 g.3.11.1 (L:46-82) Fac 88.2 0.11 7.7E-06 37.9 2.1 33 532-570 3-36 (37)
14 d3egfa_ g.3.11.1 (A:) Epiderma 87.7 0.31 2.2E-05 37.8 4.7 34 536-573 12-45 (53)
15 d1xdtr_ g.3.11.1 (R:) Heparin- 87.4 0.11 8.3E-06 38.8 1.9 34 533-571 1-38 (41)
16 d1haea_ g.3.11.1 (A:) Hereguli 86.2 0.24 1.7E-05 39.4 3.4 38 536-574 12-49 (63)
17 d1q4ga2 g.3.11.1 (A:32-73) Pro 85.6 0.21 1.6E-05 37.1 2.6 36 532-572 3-40 (42)
18 d1nqlb_ g.3.11.1 (B:) Epiderma 85.5 0.16 1.2E-05 38.7 1.9 35 533-571 6-41 (48)
19 d1cvua2 g.3.11.1 (A:33-73) Pro 82.8 0.39 2.8E-05 35.4 2.9 36 532-572 2-39 (41)
20 d1jv2b5 g.3.11.6 (B:563-605) I 81.1 0.42 3.1E-05 36.1 2.6 31 532-572 3-38 (43)
21 d1gl4a2 g.3.11.5 (A:359-398) E 79.1 0.32 2.3E-05 35.9 1.4 31 536-572 7-39 (40)
22 d2i9aa1 g.3.11.1 (A:10-49) Pla 71.8 1.2 8.7E-05 32.8 2.8 35 537-574 3-37 (40)
23 d1ioxa_ g.3.11.1 (A:) Betacell 69.6 0.82 5.9E-05 35.2 1.5 36 532-572 6-45 (50)
24 d1moxc_ g.3.11.1 (C:) Transfor 62.4 1.8 0.00013 33.1 2.2 36 532-572 5-44 (49)
25 d1uzka1 g.3.11.1 (A:1486-1528) 60.4 2.5 0.00018 31.0 2.6 27 540-572 13-43 (43)
26 d1lmja2 g.3.11.1 (A:47-88) Fib 57.7 3.8 0.00028 29.9 3.2 26 535-567 9-34 (42)
27 d1emoa1 g.3.11.1 (A:2124-2166) 50.3 1.7 0.00012 32.1 0.2 35 531-571 5-42 (43)
28 d1lmja1 g.3.11.1 (A:3-46) Fibr 50.0 2.9 0.00021 31.1 1.5 26 536-568 11-36 (44)
29 d1uzka2 g.3.11.1 (A:1605-1647) 42.5 6.7 0.00049 28.7 2.5 25 536-567 11-35 (43)
30 d1kloa1 g.3.11.2 (A:11-65) Lam 34.5 8.9 0.00065 29.3 2.1 31 538-572 3-34 (55)
31 d2hoxa1 c.67.1.1 (A:1-425) All 25.5 7.9 0.00057 39.9 0.4 36 536-573 18-53 (425)
No 1
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.34 E-value=0.0067 Score=44.86 Aligned_cols=36 Identities=31% Similarity=0.805 Sum_probs=28.8
Q ss_pred ccc-ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003218 532 ERC-PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 573 (838)
Q Consensus 532 s~C-~~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd~ 573 (838)
++| ++.|.++|.|.... |+| .|.|.+||.|..|.++
T Consensus 2 ~~C~~~pC~ngg~C~~~~---~~~---~C~C~~g~~G~~Ce~~ 38 (39)
T d1g1ta2 2 AACTNTSCSGHGECVETI---NNY---TCKCDPGFSGLKCEQI 38 (39)
T ss_dssp CCCCTTGGGGSEEEEEET---TEE---EEEECTTEESTTSCEE
T ss_pred CcccCCcCCCCcEEECCC---CCE---EEeCCCCCcCcCcCcc
Confidence 467 48899999999753 334 7999999999999753
No 2
>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.18 E-value=0.0084 Score=42.62 Aligned_cols=25 Identities=52% Similarity=1.194 Sum_probs=22.3
Q ss_pred CCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003218 537 RCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 571 (838)
Q Consensus 537 ~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCt 571 (838)
-|++||+|.- | .|.|+.||.|..|.
T Consensus 4 ~C~ghG~C~C-----G-----~C~C~~gw~G~~CN 28 (31)
T d1jv2b4 4 MCSGHGQCSC-----G-----DCLCDSDWTGYYCN 28 (31)
T ss_dssp CSCCCTTCCS-----T-----TTCCCTTEESSSSC
T ss_pred eccCCCcccC-----C-----ceEccCCccccccc
Confidence 4999999986 4 89999999999984
No 3
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.73 E-value=0.027 Score=41.59 Aligned_cols=36 Identities=25% Similarity=0.708 Sum_probs=28.4
Q ss_pred ccc-ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003218 532 ERC-PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 573 (838)
Q Consensus 532 s~C-~~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd~ 573 (838)
.+| ++.|.+.|.|.-.. +.| .|.|.+||.|..|..+
T Consensus 2 d~C~~~PC~n~g~C~~~~---~~y---~C~C~~G~~G~~Ce~d 38 (39)
T d2vj3a2 2 NECVSNPCQNDATCLDQI---GEF---QCICMPGYEGVHCEVN 38 (39)
T ss_dssp CTTTTCCCCSSCEEEECS---SCE---EEECCTTEESSSSCEE
T ss_pred cCCcCCCCCCCCEEECCC---CCE---EEeCCCCCccCcCeeC
Confidence 457 47899999999643 335 7999999999999653
No 4
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.57 E-value=0.031 Score=41.14 Aligned_cols=35 Identities=23% Similarity=0.655 Sum_probs=28.4
Q ss_pred eccc-ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003218 531 LERC-PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 571 (838)
Q Consensus 531 ls~C-~~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCt 571 (838)
..+| ++.|-+.|.|.... ++| .|.|.+||.|..|-
T Consensus 3 ~d~C~~~PC~ngg~C~~~~---~~y---~C~C~~g~~G~~Ce 38 (39)
T d1edmb_ 3 GDQCESNPCLNGGSCKDDI---NSY---ECWCPFGFEGKNCE 38 (39)
T ss_dssp CCTTTTCCCCTTCEEEEET---TEE---EEECCTTCCSTTSC
T ss_pred cccCCCCCCCCCcEEEcCC---CCE---EEECCCCCCCCCCC
Confidence 4678 48999999998753 334 79999999999983
No 5
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.35 E-value=0.036 Score=42.42 Aligned_cols=39 Identities=36% Similarity=0.841 Sum_probs=30.1
Q ss_pred EEecccc----cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003218 529 VSLERCP----KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 572 (838)
Q Consensus 529 vsls~C~----~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd 572 (838)
+++++|+ +-|- ||.|..+.+.++ ..|.|..||.|.-|-.
T Consensus 1 v~i~~C~~~~~~yC~-nG~C~~~~~~~~----~~C~C~~gY~G~RCe~ 43 (46)
T d1k36a_ 1 VSITKCSSDMNGYCL-HGQCIYLVDMSQ----NYCRCEVGYTGVRCEH 43 (46)
T ss_dssp CCEECCCTTCCSSCS-SEEEEEETTTTE----EEEEECTTCSSTTSCC
T ss_pred CceeeCCCcCCCcCc-CCEEEEeCCCCc----cEeECCCCceecCcee
Confidence 3567887 4785 699998866542 3799999999999953
No 6
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.33 E-value=0.069 Score=39.59 Aligned_cols=36 Identities=28% Similarity=0.653 Sum_probs=28.6
Q ss_pred ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCccc
Q 003218 535 PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVEL 574 (838)
Q Consensus 535 ~~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd~s 574 (838)
++.|-+.|.|......+ .| .|.|..||.|..|..++
T Consensus 3 ~nPC~ngG~C~~~~~~~-~y---~C~C~~g~~G~~Ce~~~ 38 (41)
T d1tpga1 3 EPRCFNGGTCQQALYFS-DF---VCQCPEGFAGKSCEIDT 38 (41)
T ss_dssp SCCSCTTCEEEEESSSS-CE---EEECCTTCBSSSCCBCS
T ss_pred CCCCCCCCEEecCCCCC-Ce---EECCCCCCCCCCcCcCc
Confidence 47888899999864332 24 89999999999998664
No 7
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.07 E-value=0.039 Score=40.94 Aligned_cols=32 Identities=28% Similarity=0.701 Sum_probs=26.5
Q ss_pred ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003218 535 PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 572 (838)
Q Consensus 535 ~~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd 572 (838)
++.|..+|.|.-.. |.| .|.|.+||.|..|..
T Consensus 10 ~~pC~n~g~C~n~~---g~y---~C~C~~G~~G~~Ce~ 41 (42)
T d2vj3a1 10 ANPCEHAGKCINTL---GSF---ECQCLQGYTGPRCEI 41 (42)
T ss_dssp SCSSSTTCEEEECS---SSE---EEECCTTEESTTSCE
T ss_pred CCCCCCCcEeECCC---CCE---EeECCCCCcCCCCcC
Confidence 47899999999753 445 999999999999963
No 8
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.75 E-value=0.031 Score=41.41 Aligned_cols=35 Identities=29% Similarity=0.725 Sum_probs=28.1
Q ss_pred ccc-ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003218 532 ERC-PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 572 (838)
Q Consensus 532 s~C-~~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd 572 (838)
..| ++.|.++|.|.... +.| .|.|.+||.|..|..
T Consensus 2 ~~C~~~pC~ngg~C~~~~---~~y---~C~C~~g~~G~~Ce~ 37 (40)
T d1g1sa2 2 ASCQDMSCSKQGECLETI---GNY---TCSCYPGFYGPECEY 37 (40)
T ss_dssp CCCCTTGGGGSEEEEECS---SSE---EEEECTTEESTTSCE
T ss_pred CcccCCcCCCCcEEECCC---CCe---EEeCCCCccCCCCCC
Confidence 467 48899999998753 334 899999999999964
No 9
>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.89 E-value=0.039 Score=41.46 Aligned_cols=25 Identities=32% Similarity=0.826 Sum_probs=21.2
Q ss_pred CCCC--CceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003218 537 RCSS--HGQCRNAFDASGLTLYSFCACDRDHGGFDCS 571 (838)
Q Consensus 537 ~Cg~--~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCt 571 (838)
.|+. ||+|.- | .|.|++||.|.+|.
T Consensus 14 ~C~g~~hG~C~~-----G-----~C~C~~Gw~G~~Ce 40 (41)
T d1l3ya_ 14 VCGGPGRGLCFC-----G-----KCRCHPGFEGSACQ 40 (41)
T ss_dssp SSSHHHHEEEET-----T-----EEEECTTCCTTTTC
T ss_pred cCCCCCCCeEEC-----C-----EEEcCCCCcccCcc
Confidence 5765 999974 5 89999999999994
No 10
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.04 E-value=0.062 Score=41.36 Aligned_cols=36 Identities=31% Similarity=0.727 Sum_probs=28.2
Q ss_pred cccc-cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCccc
Q 003218 532 ERCP-KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVEL 574 (838)
Q Consensus 532 s~C~-~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd~s 574 (838)
.+|. +.|. ||.|.... |+| .|.|.+||.|..|..++
T Consensus 9 ~~C~~~PC~-nG~C~~~~---~~y---~C~C~~G~~G~~Ce~~I 45 (48)
T d1autl1 9 HPCASLCCG-HGTCIDGI---GSF---SCDCRSGWEGRFCQREV 45 (48)
T ss_dssp CSSSSTTTT-SEEECCCS---SCC---CEEECTTEESTTSCEEC
T ss_pred CcccCCCCC-CCEEECCC---CCC---eEeCCCCCcCCCccccc
Confidence 5785 6784 69999753 334 79999999999998765
No 11
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.52 E-value=0.073 Score=39.19 Aligned_cols=34 Identities=26% Similarity=0.892 Sum_probs=27.2
Q ss_pred cc-ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003218 533 RC-PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 572 (838)
Q Consensus 533 ~C-~~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd 572 (838)
.| ++.|.+.|.|.... +.| .|.|.+||.|..|..
T Consensus 2 ~C~~~PC~ngg~C~~~~---~~y---~C~C~~G~~G~~Cei 36 (39)
T d1xkba1 2 QCETSPCQNQGKCKDGL---GEY---TCTCLEGFEGKNCEL 36 (39)
T ss_dssp TTTTCCCCSSCEECCCS---SSC---CEECCTTEETTTTCE
T ss_pred cCCCCCCCCCcEEECCC---CCE---EEECCCCCCcCcCeE
Confidence 46 37899999999753 334 899999999999954
No 12
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.40 E-value=0.092 Score=37.70 Aligned_cols=32 Identities=25% Similarity=0.728 Sum_probs=25.6
Q ss_pred cc-ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCC
Q 003218 533 RC-PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDC 570 (838)
Q Consensus 533 ~C-~~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdC 570 (838)
+| ++.|-+.|.|.... +.| .|.|..||.|..|
T Consensus 2 ~C~~~PC~ngg~C~~~~---~~y---~C~C~~g~~G~~C 34 (35)
T d2vj3a3 2 ECASSPCLHNGRCLDKI---NEF---QCECPTGFTGHLC 34 (35)
T ss_dssp TTTTCCSTTTCEEEECS---SCE---EEECCTTEESSSS
T ss_pred CCCCCCCCCCcEEECCC---CCe---EEECCCCCCCCCc
Confidence 56 47899999998643 224 6999999999988
No 13
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}
Probab=88.18 E-value=0.11 Score=37.86 Aligned_cols=33 Identities=24% Similarity=0.799 Sum_probs=26.8
Q ss_pred cccc-cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCC
Q 003218 532 ERCP-KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDC 570 (838)
Q Consensus 532 s~C~-~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdC 570 (838)
.+|. +.|.+.|.|.... +.| .|.|.+||.|..|
T Consensus 3 d~C~~~PC~ngg~C~~~~---~~y---~C~C~~g~~G~~C 36 (37)
T d2c4fl1 3 DQCASSPCQNGGSCKDQL---QSY---ICFCLPAFEGRNC 36 (37)
T ss_dssp CGGGGCCCCTTCEEEEET---TEE---EEECCTTEESTTS
T ss_pred ccCCCCCCCCCCEEECCC---CCe---EEECCCCCcCCCC
Confidence 4674 8899999999753 334 8999999999988
No 14
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}
Probab=87.73 E-value=0.31 Score=37.81 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=26.9
Q ss_pred cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003218 536 KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 573 (838)
Q Consensus 536 ~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd~ 573 (838)
+-|.+.|.|......++ + .|.|.+||.|.-|-..
T Consensus 12 ~~C~NgG~C~~~~~~~~-~---~C~C~~gy~G~~Ce~~ 45 (53)
T d3egfa_ 12 GYCLNGGVCMHIESLDS-Y---TCNCVIGYSGDRCQTR 45 (53)
T ss_dssp CCSCSSCEEEEESSSSC-E---EEECCTTCCSSSSCCC
T ss_pred CCCCCCcEeeccCCCCC-e---EeECCCCCcCCCCccC
Confidence 67989999997654332 3 7999999999999643
No 15
>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}
Probab=87.42 E-value=0.11 Score=38.83 Aligned_cols=34 Identities=26% Similarity=0.744 Sum_probs=27.0
Q ss_pred ccccC----CCCCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003218 533 RCPKR----CSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 571 (838)
Q Consensus 533 ~C~~~----Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCt 571 (838)
||+.+ |= ||+|..+.+.+ -.+|.|..||.|.-|-
T Consensus 1 PC~~~~~~yCi-hG~C~~i~~l~----~~~C~C~~gY~G~RCq 38 (41)
T d1xdtr_ 1 PCLRKYKDFCI-HGECKYVKELR----APSCICHPGYHGERCH 38 (41)
T ss_dssp CTTTTTTTCCS-SEEECCBGGGT----BCCEEECTTEESTTCC
T ss_pred CCCcccCCEeE-CcEEeecCcCC----CceeECCCCCeecCcc
Confidence 67643 85 69999987665 3489999999999984
No 16
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.21 E-value=0.24 Score=39.35 Aligned_cols=38 Identities=26% Similarity=0.617 Sum_probs=28.5
Q ss_pred cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCccc
Q 003218 536 KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVEL 574 (838)
Q Consensus 536 ~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd~s 574 (838)
+-|.+.|.|..+.+.++...| .|.|..||.|-.|....
T Consensus 12 ~~C~NgG~C~~~~~~~~~~~y-~C~C~~gy~G~~Ce~~~ 49 (63)
T d1haea_ 12 TFCVNGGECFMVKDLSNPSRY-LCKCQPGFTGARCTENV 49 (63)
T ss_dssp TTSCTTCEEEEEESSSSSCCE-EEECCTTEESTTSCEEC
T ss_pred CcCCCCCEEeecccccCCCCE-EeECCCCCCCCCcCCCC
Confidence 569899999877654332122 79999999999997554
No 17
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}
Probab=85.56 E-value=0.21 Score=37.07 Aligned_cols=36 Identities=25% Similarity=0.568 Sum_probs=27.5
Q ss_pred cccc-cCCCCCceeeeeeccCCceEEeeeeeCC-CCCCcCCCc
Q 003218 532 ERCP-KRCSSHGQCRNAFDASGLTLYSFCACDR-DHGGFDCSV 572 (838)
Q Consensus 532 s~C~-~~Cg~~G~C~ll~~~sG~~~ys~C~C~~-Gy~GwdCtd 572 (838)
.+|. +.|.+.|.|..... +.| .|.|.+ ||.|..|..
T Consensus 3 d~C~~nPC~ngG~C~~~~~--~~y---~C~C~~~G~~G~~Ce~ 40 (42)
T d1q4ga2 3 NPCCYYPCQHQGICVRFGL--DRY---QCDCTRTGYSGPNCTI 40 (42)
T ss_dssp CGGGGCCCCTTCEEEEETT--TEE---EEECTTSSEETTTTCE
T ss_pred ccCcCCCCCCCCEeeeCCC--CCE---EEECCCCCcCCcCcCc
Confidence 5774 89999999986421 224 899987 999999963
No 18
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.54 E-value=0.16 Score=38.75 Aligned_cols=35 Identities=20% Similarity=0.300 Sum_probs=27.5
Q ss_pred ccc-cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003218 533 RCP-KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 571 (838)
Q Consensus 533 ~C~-~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCt 571 (838)
+|. +-|-+.|+|..+.+.++ + .|.|..||.|.-|-
T Consensus 6 ~c~~~~C~ngG~C~~~~~~~~-~---~C~C~~gy~G~~Ce 41 (48)
T d1nqlb_ 6 LSHDGYCLHDGVCMYIEALDK-Y---ACNCVVGYIGERCQ 41 (48)
T ss_dssp STTCCEECTTCEEEEETTTTE-E---EEEECTTEESTTSC
T ss_pred CCCCCCCCCCcEEeeeCCCCC-e---EEeCCCCcccCCCC
Confidence 453 56988899998765432 3 79999999999995
No 19
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}
Probab=82.76 E-value=0.39 Score=35.43 Aligned_cols=36 Identities=22% Similarity=0.599 Sum_probs=27.1
Q ss_pred ccc-ccCCCCCceeeeeeccCCceEEeeeeeC-CCCCCcCCCc
Q 003218 532 ERC-PKRCSSHGQCRNAFDASGLTLYSFCACD-RDHGGFDCSV 572 (838)
Q Consensus 532 s~C-~~~Cg~~G~C~ll~~~sG~~~ys~C~C~-~Gy~GwdCtd 572 (838)
.+| ++.|.+.|.|..... +.| .|.|. .||.|..|..
T Consensus 2 d~C~~~PC~ngG~C~~~~~--~~y---~C~C~~~gy~G~~Ce~ 39 (41)
T d1cvua2 2 NPCCSNPCQNRGECMSTGF--DQY---KCDCTRTGFYGENCTT 39 (41)
T ss_dssp CTTTTCCCCTTCEEEEEET--TEE---EEECTTSSEETTTTCE
T ss_pred CcCcCCCCCCCCEEEECCC--CCE---EEeCcCCCcCCcCcCc
Confidence 467 489999999986422 223 89996 5999999963
No 20
>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=81.12 E-value=0.42 Score=36.09 Aligned_cols=31 Identities=32% Similarity=0.807 Sum_probs=24.6
Q ss_pred ccccc-C---CCCCceeeeeeccCCceEEeeeeeC-CCCCCcCCCc
Q 003218 532 ERCPK-R---CSSHGQCRNAFDASGLTLYSFCACD-RDHGGFDCSV 572 (838)
Q Consensus 532 s~C~~-~---Cg~~G~C~ll~~~sG~~~ys~C~C~-~Gy~GwdCtd 572 (838)
+.|.. + |++||+|.- | .|.|+ +||.|..|-+
T Consensus 3 d~C~~~~g~iCng~G~C~c-----G-----~C~C~~~gy~G~~Ce~ 38 (43)
T d1jv2b5 3 DTCMSSNGLLCSGRGKCEC-----G-----SCVCIQPGSYGDTCEK 38 (43)
T ss_dssp STTCCSSCSGGGGTEEEET-----T-----EEEECCSSCBSTTSCB
T ss_pred cccCCCCCCEECCCCEEEC-----C-----EeEeCCCCccCCcccc
Confidence 45653 3 999999985 5 89995 7999999953
No 21
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=79.14 E-value=0.32 Score=35.94 Aligned_cols=31 Identities=29% Similarity=0.695 Sum_probs=24.0
Q ss_pred cCCCCCceeeeeeccCCceEEeeeeeCCCCCCc--CCCc
Q 003218 536 KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGF--DCSV 572 (838)
Q Consensus 536 ~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~Gw--dCtd 572 (838)
++|+.+.+|.-. .|.| .|.|++||.|- .|+.
T Consensus 7 ~~C~~~A~C~Nt---~Gsy---~C~C~~Gy~GdG~~C~~ 39 (40)
T d1gl4a2 7 HQCSVHAECRDY---ATGF---CCRCVANYTGNGRQCVA 39 (40)
T ss_dssp GGSCTTEEEEEC---SSCE---EEEECTTEEECSSSEEE
T ss_pred CCCCCCCEeecC---CCCe---EeECCCCCcCCCCEeeC
Confidence 689999999975 3556 89999999854 3543
No 22
>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.84 E-value=1.2 Score=32.81 Aligned_cols=35 Identities=26% Similarity=0.735 Sum_probs=28.3
Q ss_pred CCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCccc
Q 003218 537 RCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVEL 574 (838)
Q Consensus 537 ~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd~s 574 (838)
.|-+-|.|..+..-|+. --|+|.++|+|.-|--+.
T Consensus 3 ~ClNGG~Cvsyk~FS~I---~rC~CPk~f~G~HCEiDt 37 (40)
T d2i9aa1 3 DCLNGGTCVSNKYFSNI---HWCNCPKKFGGQHCEIDK 37 (40)
T ss_dssp CCCTTCEEEECSSSTTC---EEEECCTTEESTTSCEES
T ss_pred ccccCCEEEEEehhcCC---EEecCCcccCceeEEecc
Confidence 46678999998776654 489999999999997554
No 23
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=69.64 E-value=0.82 Score=35.16 Aligned_cols=36 Identities=36% Similarity=0.822 Sum_probs=25.9
Q ss_pred ccccc----CCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003218 532 ERCPK----RCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 572 (838)
Q Consensus 532 s~C~~----~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd 572 (838)
.||+. =|- ||.|-.+...+. ..|.|..||.|.-|-.
T Consensus 6 ~pC~~~~~~yC~-nGgcc~~~~~~~----~~C~C~~gy~G~rCe~ 45 (50)
T d1ioxa_ 6 SRCPKQYKHYCI-KGRCRFVVAEQT----PSCVCDEGYIGARCER 45 (50)
T ss_dssp EECCGGGTTSCT-TCCEEEETTTTE----EEECCCTTEETTTTCE
T ss_pred CccCcccCCCcc-CCeEEEeCCCCC----cEeECCCCCeeCCCcc
Confidence 57873 484 577776655442 3799999999999953
No 24
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.38 E-value=1.8 Score=33.05 Aligned_cols=36 Identities=31% Similarity=0.743 Sum_probs=26.0
Q ss_pred cccc----cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003218 532 ERCP----KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 572 (838)
Q Consensus 532 s~C~----~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd 572 (838)
.||+ +=| -||.|-.+.+.. -..|.|..||.|.-|-.
T Consensus 5 ~pC~~~~~~yC-lnGgcc~~~~~~----~~~C~C~~gy~G~RCe~ 44 (49)
T d1moxc_ 5 NDCPDSHTQFC-FHGTCRFLVQED----KPACVCHSGYVGARCEH 44 (49)
T ss_dssp ECCCCCSSCSS-TTEEEEEETTTT----EEEEEECTTEESTTSCE
T ss_pred CccCcccCCEe-eCCeEEecCCCC----CcEeECCCCCEecCCcc
Confidence 5786 347 468787665433 34799999999999953
No 25
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.45 E-value=2.5 Score=30.97 Aligned_cols=27 Identities=30% Similarity=0.623 Sum_probs=20.9
Q ss_pred CCceeeeeeccCCceEEeeeeeCCCC----CCcCCCc
Q 003218 540 SHGQCRNAFDASGLTLYSFCACDRDH----GGFDCSV 572 (838)
Q Consensus 540 ~~G~C~ll~~~sG~~~ys~C~C~~Gy----~GwdCtd 572 (838)
.+|.|.-.. |+| .|.|.+|| .|..|.|
T Consensus 13 c~~~C~Nt~---G~y---~C~C~~Gy~l~~d~~~C~D 43 (43)
T d1uzka1 13 ISGNCVNTP---GSY---ICDCPPDFELNPTRVGCVD 43 (43)
T ss_dssp BTSEEEEET---TEE---EEECCTTCEECTTSSBEEC
T ss_pred cCCEeECCC---CCE---EEecCCCCEECCCCCcccC
Confidence 589999875 556 99999999 5666643
No 26
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.73 E-value=3.8 Score=29.93 Aligned_cols=26 Identities=35% Similarity=0.672 Sum_probs=20.5
Q ss_pred ccCCCCCceeeeeeccCCceEEeeeeeCCCCCC
Q 003218 535 PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGG 567 (838)
Q Consensus 535 ~~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~G 567 (838)
+..| .||+|.-.. |.| .|.|.+||..
T Consensus 9 ~~~C-~~~~C~Nt~---Gsy---~C~C~~Gy~l 34 (42)
T d1lmja2 9 PLLC-RGGVCHNTE---GSY---RCECPPGHQL 34 (42)
T ss_dssp SSTT-TTSEEEEET---TEE---EEESCTTSCC
T ss_pred CCCC-CCCEeECCC---CCe---EEeCCCCCeE
Confidence 3567 589999864 556 8999999984
No 27
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=50.31 E-value=1.7 Score=32.10 Aligned_cols=35 Identities=31% Similarity=0.657 Sum_probs=24.4
Q ss_pred ecccc-cCCCCCceeeeeeccCCceEEeeeeeCCCCC--CcCCC
Q 003218 531 LERCP-KRCSSHGQCRNAFDASGLTLYSFCACDRDHG--GFDCS 571 (838)
Q Consensus 531 ls~C~-~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~--GwdCt 571 (838)
...|. ++|+.+++|.-.. |.| .|.|.+||. |..|.
T Consensus 5 idEC~~~~~~~~~~C~Nt~---Gsy---~C~C~~Gy~~~g~~C~ 42 (43)
T d1emoa1 5 MDECKEPDVCKHGQCINTD---GSY---RCECPFGYILAGNECV 42 (43)
T ss_dssp CCSSSSTTSCSSSCCCCCS---SCC---CCCCCTTEEESSSCEE
T ss_pred eeccCCcCCCCCCEeECCC---CCe---EeECCCCcccCCCccc
Confidence 34563 4566788999754 556 899999996 55553
No 28
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=49.99 E-value=2.9 Score=31.11 Aligned_cols=26 Identities=35% Similarity=0.599 Sum_probs=20.6
Q ss_pred cCCCCCceeeeeeccCCceEEeeeeeCCCCCCc
Q 003218 536 KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGF 568 (838)
Q Consensus 536 ~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~Gw 568 (838)
..| .||+|.-.. |.| .|.|..||.|-
T Consensus 11 ~~C-~~~~C~Nt~---Gsy---~C~C~~Gy~~~ 36 (44)
T d1lmja1 11 DLC-GRGQCVNTP---GDF---ECKCDEGYESG 36 (44)
T ss_dssp STT-TTSCEEEET---TEE---EECCCSSEEEC
T ss_pred CCC-CCCEeEcCC---CCe---EEeCCCCCccC
Confidence 457 579999864 656 99999999874
No 29
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=42.55 E-value=6.7 Score=28.67 Aligned_cols=25 Identities=32% Similarity=0.618 Sum_probs=19.6
Q ss_pred cCCCCCceeeeeeccCCceEEeeeeeCCCCCC
Q 003218 536 KRCSSHGQCRNAFDASGLTLYSFCACDRDHGG 567 (838)
Q Consensus 536 ~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~G 567 (838)
..|. +|.|.-.. |.| .|.|.+||..
T Consensus 11 ~~c~-~~~C~Nt~---Gsy---~C~C~~Gy~l 35 (43)
T d1uzka2 11 GLCQ-GGKCINTF---GSF---QCRCPTGYYL 35 (43)
T ss_dssp GGGB-TSEEEECS---SCE---EEECCTTCCB
T ss_pred CCcC-CCEEECCC---CCe---EeECCCCCeE
Confidence 4674 78999864 667 9999999974
No 30
>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=34.54 E-value=8.9 Score=29.27 Aligned_cols=31 Identities=19% Similarity=0.543 Sum_probs=22.1
Q ss_pred CCCCceeeeeeccCCceEEeee-eeCCCCCCcCCCc
Q 003218 538 CSSHGQCRNAFDASGLTLYSFC-ACDRDHGGFDCSV 572 (838)
Q Consensus 538 Cg~~G~C~ll~~~sG~~~ys~C-~C~~Gy~GwdCtd 572 (838)
|.+|+.|...... | ...| .|+.||.|..|..
T Consensus 3 C~~~~~c~~~~~~-~---~~vC~~C~~~~~G~~Ce~ 34 (55)
T d1kloa1 3 CPGGSSCAIVPKT-K---EVVCTHCPTGTAGKRCEL 34 (55)
T ss_dssp SCTTCCEEECSSS-C---CEEECSCCTTEESTTSCE
T ss_pred CcCCCccceeCCC-C---CEEcCCCCCCCccCcccc
Confidence 5578888875432 2 2257 7999999999964
No 31
>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum) [TaxId: 4682]}
Probab=25.50 E-value=7.9 Score=39.89 Aligned_cols=36 Identities=31% Similarity=0.386 Sum_probs=25.7
Q ss_pred cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003218 536 KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 573 (838)
Q Consensus 536 ~~Cg~~G~C~ll~~~sG~~~ys~C~C~~Gy~GwdCtd~ 573 (838)
-+|++||+=.+-.-... ---.|.|..-|+|.||+..
T Consensus 18 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 53 (425)
T d2hoxa1 18 INCSEHGRAFLDGIISE--GSPKCECNTCYTGPDCSEK 53 (425)
T ss_dssp SCCGGGEECCTTSCEET--TEECCEECTTEESTTSCEE
T ss_pred eeecCCcceeecccccC--CCcccccccCCCCCccccc
Confidence 37999998665211111 2368999999999999964
Done!