Query 003233
Match_columns 837
No_of_seqs 12 out of 14
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 18:05:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003233.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/003233hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1d0gr3 g.24.1.1 (R:102-128) D 4.3 1.1E+02 0.0078 20.7 0.5 8 483-490 14-21 (27)
2 d2bw3a1 a.270.1.1 (A:79-162) T 3.5 1.5E+02 0.011 24.3 0.8 13 481-493 24-36 (84)
3 d1y4ja1 d.169.1.7 (A:28-294) S 2.6 2E+02 0.014 24.1 0.6 26 455-480 27-52 (267)
4 d1k9vf_ c.23.16.1 (F:) GAT sub 2.5 2.5E+02 0.018 22.8 1.2 9 803-811 45-53 (200)
5 d2zjq51 d.45.1.1 (5:52-122) Ri 2.1 3.3E+02 0.024 21.2 1.4 22 805-827 9-30 (71)
6 d1icaa_ g.3.7.4 (A:) Defensin 2.0 4.3E+02 0.031 19.0 1.7 24 804-829 4-27 (40)
7 d1dd3a2 d.45.1.1 (A:58-128) Ri 1.9 3.4E+02 0.025 21.2 1.1 22 805-827 5-26 (71)
8 d1vkoa1 c.2.1.3 (A:11-314,A:42 1.9 4E+02 0.029 26.2 1.8 27 109-135 346-372 (397)
9 d1ctfa_ d.45.1.1 (A:) Ribosoma 1.8 4E+02 0.029 20.6 1.4 22 805-827 5-26 (68)
10 d1usub_ d.83.2.1 (B:) Activato 1.7 1.9E+02 0.014 24.1 -0.9 8 482-489 2-9 (142)
No 1
>d1d0gr3 g.24.1.1 (R:102-128) Death receptor-5 (dr5) fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.31 E-value=1.1e+02 Score=20.68 Aligned_cols=8 Identities=38% Similarity=0.588 Sum_probs=6.4
Q ss_pred cccccccc
Q 003233 483 ETCQPVSI 490 (837)
Q Consensus 483 encqPisl 490 (837)
.+|-|||=
T Consensus 14 ~dctpwsd 21 (27)
T d1d0gr3 14 GDCTPWSD 21 (27)
T ss_dssp ECCBTTBC
T ss_pred ccCccccc
Confidence 58999984
No 2
>d2bw3a1 a.270.1.1 (A:79-162) Transposase Hermes, dimerisation domain {House fly (Musca domestica) [TaxId: 7370]}
Probab=3.50 E-value=1.5e+02 Score=24.26 Aligned_cols=13 Identities=38% Similarity=0.790 Sum_probs=10.6
Q ss_pred hhccccccccccc
Q 003233 481 VEETCQPVSICEG 493 (837)
Q Consensus 481 vtencqPisl~E~ 493 (837)
+-+||+|+|+-+.
T Consensus 24 ~V~nCRp~siv~d 36 (84)
T d2bw3a1 24 VVRDCRPFSAVSG 36 (84)
T ss_dssp HHHTTCCGGGGGC
T ss_pred HHhcCcccchhcc
Confidence 5689999999654
No 3
>d1y4ja1 d.169.1.7 (A:28-294) Sulfatase modifying factor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.56 E-value=2e+02 Score=24.14 Aligned_cols=26 Identities=12% Similarity=0.052 Sum_probs=22.2
Q ss_pred ccccccccccchhcccchhhhhhhhh
Q 003233 455 QCKKTIEGNEITETEVSKEQITEEKE 480 (837)
Q Consensus 455 q~kKTieAnEi~~tEvs~EQI~EEKe 480 (837)
+|+.||.+=.|.+.|||+.|+.+=-.
T Consensus 27 ~~~v~l~~F~i~k~eVTn~qy~~Fl~ 52 (267)
T d1y4ja1 27 VREATVKPFAIDIFPVTNKDFRDFVR 52 (267)
T ss_dssp CEEEEECSEEEESSCCBHHHHHHHHH
T ss_pred ceEEEECCeEEECeeehHHHHHHHHH
Confidence 57889998899999999999987543
No 4
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF {Thermotoga maritima [TaxId: 2336]}
Probab=2.51 E-value=2.5e+02 Score=22.82 Aligned_cols=9 Identities=33% Similarity=0.582 Sum_probs=6.6
Q ss_pred ccccccccc
Q 003233 803 HNILSGVGS 811 (837)
Q Consensus 803 hniLSGVGS 811 (837)
.=||.|||+
T Consensus 45 ~lIlPG~G~ 53 (200)
T d1k9vf_ 45 LLFIPGVGH 53 (200)
T ss_dssp EEEECCCSC
T ss_pred eEEEcChHH
Confidence 347889986
No 5
>d2zjq51 d.45.1.1 (5:52-122) Ribosomal protein L7/12, C-terminal domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=2.13 E-value=3.3e+02 Score=21.21 Aligned_cols=22 Identities=32% Similarity=0.454 Sum_probs=15.5
Q ss_pred ccccccchhhhhHHhhhhhhcCC
Q 003233 805 ILSGVGSKVKHSISKVKKAITGK 827 (837)
Q Consensus 805 iLSGVGSKVKhsiaKVKKai~GK 827 (837)
||.++|.+ |-.+.|+=++|||-
T Consensus 9 ~L~~~~~~-Ki~vIK~VR~it~L 30 (71)
T d2zjq51 9 VLIDAGAS-KINVIKEIRGITGL 30 (71)
T ss_pred EEeeCCcc-hhhHHHHHHHhcCC
Confidence 56677765 66777777777774
No 6
>d1icaa_ g.3.7.4 (A:) Defensin A {Flesh fly (Phormia terranovae) [TaxId: 34676]}
Probab=2.01 E-value=4.3e+02 Score=18.99 Aligned_cols=24 Identities=29% Similarity=0.588 Sum_probs=14.5
Q ss_pred cccccccchhhhhHHhhhhhhcCCCC
Q 003233 804 NILSGVGSKVKHSISKVKKAITGKSS 829 (837)
Q Consensus 804 niLSGVGSKVKhsiaKVKKai~GK~~ 829 (837)
-+|||+| |.|+.=-.-=...|+.|
T Consensus 4 DllS~~~--vnhsaCAaHCl~~g~~G 27 (40)
T d1icaa_ 4 DLLSGTG--INHSACAAHCLLRGNRG 27 (40)
T ss_dssp SCSSTTS--SCTHHHHHHHHHHTCSC
T ss_pred eecccCC--CchHHHHHHHHHhcCCC
Confidence 4788776 88886554444445443
No 7
>d1dd3a2 d.45.1.1 (A:58-128) Ribosomal protein L7/12, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=1.95 E-value=3.4e+02 Score=21.17 Aligned_cols=22 Identities=36% Similarity=0.552 Sum_probs=16.2
Q ss_pred ccccccchhhhhHHhhhhhhcCC
Q 003233 805 ILSGVGSKVKHSISKVKKAITGK 827 (837)
Q Consensus 805 iLSGVGSKVKhsiaKVKKai~GK 827 (837)
||.++|++ |-.+.|+=+.|||-
T Consensus 5 ~L~~~~~~-KI~vIK~VR~it~l 26 (71)
T d1dd3a2 5 VLKSFGQN-KIQVIKVVREITGL 26 (71)
T ss_dssp EEEECTTC-HHHHHHHHHHHHCC
T ss_pred EEcccCcc-chhHHHHHHHhcCC
Confidence 57777776 77777777778874
No 8
>d1vkoa1 c.2.1.3 (A:11-314,A:429-521) Myo-inositol 1-phosphate synthase {Caenorhabditis elegans [TaxId: 6239]}
Probab=1.87 E-value=4e+02 Score=26.23 Aligned_cols=27 Identities=30% Similarity=0.287 Sum_probs=22.8
Q ss_pred ccCCCCCCCCCCCCcHHHHHhhhhccc
Q 003233 109 VEKPNQVPPNHGDNDDAERQRATLENT 135 (837)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (837)
.-|-..+||...--.+.-|||+.|+|+
T Consensus 346 ~~KaPl~~~g~~~vn~l~kQr~~l~N~ 372 (397)
T d1vkoa1 346 LLKAPVVPPGTPISNAFMRQFSTLTKL 372 (397)
T ss_dssp GBSSCCCSTTSCCCCCHHHHHHHHHHH
T ss_pred hhcCCCCCCCCccchHHHHHHHHHHHH
Confidence 356678899888888999999999986
No 9
>d1ctfa_ d.45.1.1 (A:) Ribosomal protein L7/12, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=1.83 E-value=4e+02 Score=20.58 Aligned_cols=22 Identities=32% Similarity=0.483 Sum_probs=16.4
Q ss_pred ccccccchhhhhHHhhhhhhcCC
Q 003233 805 ILSGVGSKVKHSISKVKKAITGK 827 (837)
Q Consensus 805 iLSGVGSKVKhsiaKVKKai~GK 827 (837)
+|.++|.+ |-.+.|+=++|||-
T Consensus 5 ~L~~~~~~-Ki~vIK~VR~it~l 26 (68)
T d1ctfa_ 5 ILKAAGAN-KVAVIKAVRGATGL 26 (68)
T ss_dssp EEEECGGG-HHHHHHHHHHHHCC
T ss_pred EEccCCcc-hhHHHHHHHHhcCC
Confidence 56777776 77788888888874
No 10
>d1usub_ d.83.2.1 (B:) Activator of Hsp90 ATPase, Aha1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=1.74 E-value=1.9e+02 Score=24.08 Aligned_cols=8 Identities=13% Similarity=0.455 Sum_probs=4.1
Q ss_pred hccccccc
Q 003233 482 EETCQPVS 489 (837)
Q Consensus 482 tencqPis 489 (837)
.+||-||+
T Consensus 2 EKn~~~Ws 9 (142)
T d1usub_ 2 DKNCIGWA 9 (142)
T ss_dssp CEETHHHH
T ss_pred CCCccHHH
Confidence 44555554
Done!