Query         003239
Match_columns 837
No_of_seqs    607 out of 3328
Neff          6.4 
Searched_HMMs 29240
Date          Mon Mar 25 18:17:53 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003239.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003239hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4fih_A Serine/threonine-protei 100.0 2.5E-55 8.6E-60  485.3  23.6  255  107-457    72-331 (346)
  2 4b9d_A Serine/threonine-protei 100.0 4.7E-55 1.6E-59  483.9  23.1  253  109-456    24-283 (350)
  3 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.5E-55 1.9E-59  476.0  21.4  254  109-460    32-301 (311)
  4 3hyh_A Carbon catabolite-derep 100.0 1.2E-54   4E-59  466.2  22.8  249  109-455    13-268 (275)
  5 4b99_A Mitogen-activated prote 100.0 1.2E-53 4.1E-58  481.0  29.3  281  108-457    53-352 (398)
  6 4fie_A Serine/threonine-protei 100.0 4.4E-54 1.5E-58  486.7  24.7  255  107-457   149-408 (423)
  7 3ubd_A Ribosomal protein S6 ki 100.0   5E-54 1.7E-58  467.5  15.8  252  109-458    24-290 (304)
  8 3fpq_A Serine/threonine-protei 100.0 1.7E-52 5.9E-57  452.6  27.0  253  109-456    25-289 (290)
  9 4f9c_A Cell division cycle 7-r 100.0 3.7E-52 1.3E-56  463.2  26.1  304  108-457    20-360 (361)
 10 4g3f_A NF-kappa-beta-inducing  100.0 8.9E-52   3E-56  455.4  20.6  202  109-326    58-269 (336)
 11 4g31_A Eukaryotic translation  100.0 3.5E-50 1.2E-54  436.3  24.9  253  109-458     5-288 (299)
 12 3uto_A Twitchin; kinase, muscl 100.0   2E-49 6.8E-54  466.1  25.6  260  108-458   156-419 (573)
 13 3kvw_A DYRK2, dual specificity 100.0   2E-48 6.8E-53  441.5  29.1  330   84-456    77-415 (429)
 14 3v5w_A G-protein coupled recep 100.0 2.4E-49 8.2E-54  468.1  21.5  261  107-459   187-459 (689)
 15 2vx3_A Dual specificity tyrosi 100.0 2.1E-47   7E-52  425.1  32.2  341   83-456    33-379 (382)
 16 4asz_A BDNF/NT-3 growth factor 100.0 1.9E-48 6.5E-53  422.8  21.5  210  108-327    12-245 (299)
 17 4aoj_A High affinity nerve gro 100.0 4.8E-48 1.6E-52  425.0  23.7  210  108-327    40-275 (329)
 18 3llt_A Serine/threonine kinase 100.0 3.3E-47 1.1E-51  418.1  30.3  302  109-454    35-360 (360)
 19 1wak_A Serine/threonine-protei 100.0 3.3E-47 1.1E-51  420.9  30.3  312   95-455    28-397 (397)
 20 3g33_A Cell division protein k 100.0 5.2E-47 1.8E-51  407.7  26.9  283  109-457     9-304 (308)
 21 4gt4_A Tyrosine-protein kinase 100.0 7.8E-48 2.7E-52  419.6  20.6  208  109-326    26-261 (308)
 22 3niz_A Rhodanese family protei 100.0   7E-47 2.4E-51  409.3  27.7  282  108-457    20-308 (311)
 23 3omv_A RAF proto-oncogene seri 100.0 2.4E-47 8.2E-52  415.6  23.1  203  109-326    36-250 (307)
 24 2eu9_A Dual specificity protei 100.0 4.2E-46 1.4E-50  405.3  32.5  322   88-457     3-341 (355)
 25 3rp9_A Mitogen-activated prote 100.0 1.4E-46 4.9E-51  428.1  28.1  285  108-459    52-406 (458)
 26 1z57_A Dual specificity protei 100.0 5.6E-46 1.9E-50  401.2  31.1  304  109-456    14-335 (339)
 27 3ttj_A Mitogen-activated prote 100.0 1.1E-46 3.8E-51  431.8  26.9  290  108-455    61-361 (464)
 28 3oz6_A Mitogen-activated prote 100.0 2.2E-46 7.7E-51  417.2  27.5  296  109-457     9-336 (388)
 29 3o0g_A Cell division protein k 100.0 2.7E-46 9.1E-51  399.1  26.3  280  109-456     2-289 (292)
 30 1q8y_A SR protein kinase; tran 100.0 1.1E-45 3.6E-50  406.5  31.4  306  108-457    18-341 (373)
 31 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.4E-46 8.2E-51  407.9  24.3  287  107-458    32-327 (329)
 32 3n9x_A Phosphotransferase; mal 100.0 1.6E-45 5.3E-50  417.7  31.9  284  107-459    24-371 (432)
 33 4ase_A Vascular endothelial gr 100.0 1.6E-46 5.6E-51  416.6  22.4  204  108-320    63-295 (353)
 34 2pmi_A Negative RE, cyclin-dep 100.0 3.5E-46 1.2E-50  404.6  24.4  287  109-457     5-301 (317)
 35 1ob3_A PFPK5, cell division co 100.0 4.4E-46 1.5E-50  397.1  23.9  279  109-456     2-287 (288)
 36 1cm8_A Phosphorylated MAP kina 100.0   1E-45 3.4E-50  410.6  25.6  280  108-457    24-315 (367)
 37 3fe3_A MAP/microtubule affinit 100.0 3.3E-45 1.1E-49  400.9  28.1  251  109-457    15-272 (328)
 38 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.5E-46 1.5E-50  412.2  21.4  255  108-459    22-290 (353)
 39 3mtl_A Cell division protein k 100.0 1.1E-45 3.6E-50  402.0  23.6  283  109-458     2-290 (324)
 40 2xrw_A Mitogen-activated prote 100.0   3E-45   1E-49  406.4  27.1  290  109-456    25-325 (371)
 41 2fst_X Mitogen-activated prote 100.0 2.8E-45 9.4E-50  407.5  25.2  279  109-457    29-319 (367)
 42 1o6l_A RAC-beta serine/threoni 100.0   3E-45   1E-49  403.1  25.0  253  108-458     4-269 (337)
 43 1fot_A TPK1 delta, CAMP-depend 100.0 1.9E-45 6.5E-50  401.1  23.2  253  108-458     5-267 (318)
 44 2r3i_A Cell division protein k 100.0 8.8E-45   3E-49  387.2  27.2  283  109-458     3-292 (299)
 45 1ua2_A CAK, cell division prot 100.0 3.4E-45 1.1E-49  401.6  24.1  285  108-461     9-303 (346)
 46 3mi9_A Cell division protein k 100.0 9.8E-45 3.4E-49  397.4  27.5  287  108-459    16-321 (351)
 47 1tki_A Titin; serine kinase, m 100.0 4.3E-45 1.5E-49  398.0  24.5  258  108-456     4-264 (321)
 48 3fxz_A Serine/threonine-protei 100.0   5E-45 1.7E-49  392.3  24.4  255  107-457    18-277 (297)
 49 1j1b_A Glycogen synthase kinas 100.0 1.2E-44 4.1E-49  409.2  27.4  280  109-457    54-344 (420)
 50 3eb0_A Putative uncharacterize 100.0 7.4E-45 2.5E-49  404.6  25.3  280  108-456     6-328 (383)
 51 1rdq_E PKA C-alpha, CAMP-depen 100.0 5.6E-45 1.9E-49  402.8  23.5  252  109-458    41-302 (350)
 52 2yab_A Death-associated protei 100.0 7.7E-45 2.6E-49  403.7  24.6  260  107-457    10-280 (361)
 53 4e7w_A Glycogen synthase kinas 100.0 2.8E-44 9.5E-49  402.7  29.1  281  108-458    39-330 (394)
 54 3e3p_A Protein kinase, putativ 100.0 2.5E-44 8.5E-49  394.2  28.0  287  109-458    23-323 (360)
 55 3rgf_A Cyclin-dependent kinase 100.0 3.9E-45 1.3E-49  409.9  21.8  296  109-460    20-344 (405)
 56 3qyz_A Mitogen-activated prote 100.0   4E-44 1.4E-48  395.7  29.4  280  109-456    27-320 (364)
 57 4agu_A Cyclin-dependent kinase 100.0 1.1E-43 3.6E-48  381.5  30.9  283  109-458     3-293 (311)
 58 3c0i_A Peripheral plasma membr 100.0 1.5E-44 5.1E-49  398.2  24.6  258  109-456    24-293 (351)
 59 3v8s_A RHO-associated protein  100.0 2.4E-44 8.3E-49  406.7  26.9  259  108-461    68-341 (410)
 60 4exu_A Mitogen-activated prote 100.0 5.6E-44 1.9E-48  396.2  29.3  281  108-457    41-331 (371)
 61 3zgw_A Maternal embryonic leuc 100.0   7E-45 2.4E-49  402.1  21.9  251  108-456     9-267 (347)
 62 4dc2_A Protein kinase C IOTA t 100.0 9.2E-45 3.2E-49  408.4  23.3  198  108-316    51-256 (396)
 63 4aw2_A Serine/threonine-protei 100.0 3.3E-44 1.1E-48  408.8  28.0  262  108-461    73-350 (437)
 64 1xjd_A Protein kinase C, theta 100.0 4.6E-45 1.6E-49  403.1  20.3  254  108-458    16-278 (345)
 65 2y0a_A Death-associated protei 100.0   2E-44   7E-49  392.9  25.1  260  107-457     9-279 (326)
 66 3a8x_A Protein kinase C IOTA t 100.0 2.1E-44 7.3E-49  397.1  25.3  197  108-315     8-212 (345)
 67 3gni_B Strad alpha; kinase fol 100.0 1.4E-44 4.7E-49  402.6  23.6  208  108-325    24-249 (389)
 68 3soa_A Calcium/calmodulin-depe 100.0 2.7E-44 9.4E-49  410.1  26.3  258  108-456    10-274 (444)
 69 2bdw_A Hypothetical protein K1 100.0 1.9E-44 6.6E-49  399.8  23.9  256  109-455    29-290 (362)
 70 2i0e_A Protein kinase C-beta I 100.0 1.2E-44   4E-49  401.1  21.5  254  108-458    19-285 (353)
 71 3hmm_A TGF-beta receptor type- 100.0 9.8E-45 3.3E-49  393.9  20.2  193  109-316     3-221 (303)
 72 1blx_A Cyclin-dependent kinase 100.0 7.6E-44 2.6E-48  384.6  26.6  284  109-458    11-305 (326)
 73 2b9h_A MAP kinase FUS3, mitoge 100.0 2.5E-43 8.4E-48  385.3  30.0  284  108-458    10-314 (353)
 74 3lm5_A Serine/threonine-protei 100.0 1.9E-44 6.5E-49  392.6  20.9  266  109-462    28-300 (327)
 75 2i6l_A Mitogen-activated prote 100.0 8.6E-44   3E-48  381.6  25.6  283  108-458    10-314 (320)
 76 3kk8_A Calcium/calmodulin depe 100.0   3E-43   1E-47  372.6  27.3  259  108-457     5-269 (284)
 77 3a62_A Ribosomal protein S6 ki 100.0 8.1E-44 2.8E-48  388.3  23.5  253  108-458    16-285 (327)
 78 3nsz_A CK II alpha, casein kin 100.0 3.2E-43 1.1E-47  380.9  27.1  286  108-457    35-327 (330)
 79 2eue_A Carbon catabolite derep 100.0   4E-44 1.4E-48  378.6  19.0  251  107-455    11-268 (275)
 80 3uc3_A Serine/threonine-protei 100.0 3.9E-44 1.3E-48  396.9  19.6  259  108-456    19-281 (361)
 81 4ejn_A RAC-alpha serine/threon 100.0 3.8E-44 1.3E-48  407.4  19.9  254  108-459   147-414 (446)
 82 3coi_A Mitogen-activated prote 100.0 2.9E-43   1E-47  386.4  26.1  278  109-457    24-313 (353)
 83 4aaa_A Cyclin-dependent kinase 100.0 3.3E-43 1.1E-47  382.7  26.0  284  108-457    24-314 (331)
 84 2vd5_A DMPK protein; serine/th 100.0 6.1E-43 2.1E-47  395.5  28.7  261  108-461    60-339 (412)
 85 1kob_A Twitchin; kinase, intra 100.0 2.1E-43 7.2E-48  395.8  24.5  259  108-457    50-312 (387)
 86 3pg1_A Mitogen-activated prote 100.0 4.3E-43 1.5E-47  385.6  26.4  283  108-457    21-324 (362)
 87 2ac3_A MAP kinase-interacting  100.0   2E-43 6.8E-48  380.2  23.0  202  108-317    11-230 (316)
 88 3tki_A Serine/threonine-protei 100.0 1.3E-43 4.6E-48  386.3  21.8  255  108-457     6-269 (323)
 89 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.7E-44 5.7E-49  397.2  14.7  196  109-316     9-211 (336)
 90 3is5_A Calcium-dependent prote 100.0   2E-43 6.9E-48  376.4  22.3  258  107-455    20-284 (285)
 91 3p1a_A MYT1 kinase, membrane-a 100.0 3.5E-43 1.2E-47  379.9  24.4  249  109-455    57-310 (311)
 92 2zv2_A Calcium/calmodulin-depe 100.0 5.2E-44 1.8E-48  382.5  17.7  250  109-455    13-298 (298)
 93 2w4o_A Calcium/calmodulin-depe 100.0 2.3E-43 7.7E-48  388.8  22.9  258  108-457    52-313 (349)
 94 3f3z_A Calcium/calmodulin-depe 100.0 4.2E-43 1.4E-47  370.6  23.7  257  108-456     8-268 (277)
 95 2r5t_A Serine/threonine-protei 100.0 1.6E-43 5.5E-48  394.9  21.5  255  108-459    37-303 (373)
 96 4fr4_A YANK1, serine/threonine 100.0 1.8E-43 6.2E-48  396.3  21.6  254  108-459    14-281 (384)
 97 1nxk_A MAP kinase-activated pr 100.0 3.7E-43 1.3E-47  394.8  23.3  201  107-317    59-267 (400)
 98 2x4f_A Myosin light chain kina 100.0 3.3E-43 1.1E-47  391.7  22.6  258  109-457    87-350 (373)
 99 3q5i_A Protein kinase; CDPK, m 100.0 7.1E-43 2.4E-47  403.2  25.8  258  108-457    35-309 (504)
100 3pfq_A PKC-B, PKC-beta, protei 100.0 2.3E-43   8E-48  422.0  22.5  256  108-460   340-608 (674)
101 3kn6_A Ribosomal protein S6 ki 100.0 1.9E-43 6.6E-48  385.3  19.9  199  109-317     8-213 (325)
102 2qr7_A Ribosomal protein S6 ki 100.0 1.9E-43 6.5E-48  389.1  19.8  255  108-455    21-283 (342)
103 2a2a_A Death-associated protei 100.0   8E-43 2.7E-47  378.0  24.3  259  108-457    11-280 (321)
104 3qd2_B Eukaryotic translation  100.0 8.3E-43 2.8E-47  375.9  24.3  195  109-313     6-276 (332)
105 3mwu_A Calmodulin-domain prote 100.0 5.4E-43 1.9E-47  402.1  24.3  258  108-457    21-284 (486)
106 3lij_A Calcium/calmodulin depe 100.0 4.3E-43 1.5E-47  404.0  23.1  255  109-455    37-297 (494)
107 2c30_A Serine/threonine-protei 100.0 8.6E-43   3E-47  379.2  24.0  253  109-457    45-302 (321)
108 3byv_A Rhoptry kinase; malaria 100.0 1.9E-44 6.6E-49  400.5  10.3  199  108-316    72-316 (377)
109 3fdn_A Serine/threonine-protei 100.0 7.5E-43 2.6E-47  369.6  22.0  252  108-457     8-265 (279)
110 3hko_A Calcium/calmodulin-depe 100.0 3.9E-43 1.3E-47  382.5  20.1  260  108-457    25-338 (345)
111 1u5q_A Serine/threonine protei 100.0 1.3E-42 4.4E-47  383.2  24.1  254  108-457    53-313 (348)
112 3nyv_A Calmodulin-domain prote 100.0 3.7E-43 1.3E-47  402.7  20.4  257  109-457    26-289 (484)
113 2jam_A Calcium/calmodulin-depe 100.0 1.1E-42 3.7E-47  373.4  22.5  259  108-457     8-269 (304)
114 2wtk_C Serine/threonine-protei 100.0 8.6E-43 2.9E-47  372.9  21.4  254  109-458     5-272 (305)
115 3dbq_A Dual specificity protei 100.0 1.1E-42 3.9E-47  381.1  22.8  197  108-316     8-223 (343)
116 1x8b_A WEE1HU, WEE1-like prote 100.0 2.5E-42 8.4E-47  363.8  23.6  254  108-456    10-286 (289)
117 3fme_A Dual specificity mitoge 100.0 1.8E-42 6.3E-47  367.2  22.3  255  108-456     6-273 (290)
118 2rku_A Serine/threonine-protei 100.0 2.7E-42 9.1E-47  368.1  23.5  260  101-458     7-274 (294)
119 2zmd_A Dual specificity protei 100.0   2E-42 6.7E-47  387.4  22.9  197  109-317    56-271 (390)
120 1phk_A Phosphorylase kinase; g 100.0 1.1E-41 3.9E-46  363.0  27.3  257  108-457    16-291 (298)
121 2owb_A Serine/threonine-protei 100.0 2.8E-42 9.5E-47  376.8  23.1  260  101-458    33-300 (335)
122 2x7f_A TRAF2 and NCK-interacti 100.0 3.9E-42 1.3E-46  371.7  23.8  258  107-457    22-294 (326)
123 2vgo_A Serine/threonine-protei 100.0 3.2E-42 1.1E-46  365.7  22.7  252  108-457    13-270 (284)
124 3cok_A Serine/threonine-protei 100.0 1.1E-42 3.9E-47  367.5  18.8  253  108-457    10-270 (278)
125 3bhy_A Death-associated protei 100.0 3.9E-42 1.3E-46  363.9  22.7  258  109-457     5-273 (283)
126 1t4h_A Serine/threonine-protei 100.0 1.2E-41   4E-46  362.4  26.5  254  108-456    25-289 (290)
127 3q60_A ROP5B; pseudokinase, tr 100.0 6.7E-43 2.3E-47  386.9  17.4  199  109-316    62-296 (371)
128 2acx_A G protein-coupled recep 100.0 2.5E-42 8.4E-47  405.1  23.2  261  107-459   182-454 (576)
129 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.8E-42 9.4E-47  402.8  23.3  201  107-317   183-393 (543)
130 3i6u_A CDS1, serine/threonine- 100.0 8.4E-43 2.9E-47  394.0  18.4  259  108-457   134-407 (419)
131 3eqc_A Dual specificity mitoge 100.0 2.6E-42 8.9E-47  379.5  21.7  204  109-324    33-241 (360)
132 4euu_A Serine/threonine-protei 100.0 3.4E-42 1.2E-46  372.4  21.8  202  108-316     8-226 (319)
133 2y7j_A Phosphorylase B kinase  100.0 1.5E-41 5.2E-46  376.4  27.3  254  109-455    94-365 (365)
134 2y94_A 5'-AMP-activated protei 100.0 3.3E-42 1.1E-46  396.4  22.6  250  109-456    16-273 (476)
135 2j7t_A Serine/threonine-protei 100.0 6.1E-42 2.1E-46  365.7  22.5  257  107-457    17-283 (302)
136 2ycf_A Serine/threonine-protei 100.0 5.3E-42 1.8E-46  371.3  21.9  259  108-457     9-282 (322)
137 3com_A Serine/threonine-protei 100.0 9.9E-42 3.4E-46  366.6  23.7  255  108-457    28-286 (314)
138 2yex_A Serine/threonine-protei 100.0 5.5E-42 1.9E-46  360.9  21.2  253  109-457     7-269 (276)
139 3ork_A Serine/threonine protei 100.0   2E-42 6.7E-47  373.4  18.1  256  108-457    11-281 (311)
140 3an0_A Dual specificity mitoge 100.0 1.1E-41 3.8E-46  371.2  22.1  257  108-457    50-318 (340)
141 1vzo_A Ribosomal protein S6 ki 100.0   2E-42 6.8E-47  381.9  15.9  197  109-316    54-265 (355)
142 2h6d_A 5'-AMP-activated protei 100.0   1E-41 3.5E-46  359.3  20.7  250  109-456    11-268 (276)
143 2wei_A Calmodulin-domain prote 100.0 1.3E-41 4.6E-46  361.9  20.8  257  108-456    21-283 (287)
144 3dls_A PAS domain-containing s 100.0 3.6E-42 1.2E-46  377.2  16.8  197  107-315    22-232 (335)
145 2w5a_A Serine/threonine-protei 100.0 3.1E-41 1.1E-45  356.2  22.8  255  108-457     5-275 (279)
146 3a7i_A MST3 kinase, serine/thr 100.0 4.1E-41 1.4E-45  360.5  24.0  252  108-457    21-278 (303)
147 3fhr_A MAP kinase-activated pr 100.0 9.6E-42 3.3E-46  373.3  18.9  261  108-456    27-294 (336)
148 1zy4_A Serine/threonine-protei 100.0   3E-41   1E-45  358.5  21.3  189  109-308     6-226 (303)
149 3l9p_A Anaplastic lymphoma kin 100.0   4E-41 1.4E-45  373.4  21.1  256  108-455    70-344 (367)
150 4eqm_A Protein kinase; transfe 100.0 4.9E-41 1.7E-45  360.3  20.3  203  108-322    10-221 (294)
151 2izr_A Casein kinase I isoform 100.0 1.4E-40 4.8E-45  361.8  24.1  201  109-317     9-221 (330)
152 1csn_A Casein kinase-1; phosph 100.0 3.2E-40 1.1E-44  351.3  26.0  201  109-317    10-222 (298)
153 3cek_A Dual specificity protei 100.0   1E-40 3.4E-45  359.5  22.3  197  109-317    28-243 (313)
154 2pml_X PFPK7, Ser/Thr protein  100.0 1.9E-41 6.7E-46  369.6  16.9  270  109-457    31-330 (348)
155 2vwi_A Serine/threonine-protei 100.0 9.8E-42 3.3E-46  363.4  14.1  264  108-457    14-295 (303)
156 3a99_A Proto-oncogene serine/t 100.0 3.7E-41 1.3E-45  365.5  17.5  249  108-457    42-301 (320)
157 2clq_A Mitogen-activated prote 100.0 1.1E-40 3.8E-45  354.3  20.7  256  110-457    23-286 (295)
158 3gen_A Tyrosine-protein kinase 100.0 1.5E-40 5.3E-45  352.1  20.8  207  108-326    23-235 (283)
159 4hcu_A Tyrosine-protein kinase 100.0 1.7E-40 5.7E-45  349.7  20.8  205  109-325    10-220 (269)
160 3sxs_A Cytoplasmic tyrosine-pr 100.0   3E-40   1E-44  347.1  22.7  206  108-325     7-218 (268)
161 2dyl_A Dual specificity mitoge 100.0 1.5E-40 5.2E-45  357.1  20.9  254  109-456    25-290 (318)
162 3kfa_A Tyrosine-protein kinase 100.0 1.6E-40 5.5E-45  352.4  20.5  204  108-321    12-221 (288)
163 3vhe_A Vascular endothelial gr 100.0 1.3E-40 4.6E-45  364.5  20.4  204  108-320    21-303 (359)
164 2psq_A Fibroblast growth facto 100.0 2.3E-40 7.8E-45  367.9  21.8  206  108-322    80-315 (370)
165 3p86_A Serine/threonine-protei 100.0 2.7E-40 9.4E-45  357.9  21.9  252  108-455    36-299 (309)
166 3qup_A Tyrosine-protein kinase 100.0 1.4E-40 4.9E-45  359.4  19.2  255  108-457    22-306 (323)
167 3kul_A Ephrin type-A receptor  100.0 2.6E-40 8.7E-45  360.4  21.2  209  107-326    47-268 (325)
168 3s95_A LIMK-1, LIM domain kina 100.0 1.3E-40 4.3E-45  358.3  18.4  197  108-315     9-224 (310)
169 3soc_A Activin receptor type-2 100.0 1.4E-40 4.8E-45  361.3  18.6  195  109-318    24-243 (322)
170 3uzp_A CKI-delta, CKID, casein 100.0 6.8E-40 2.3E-44  348.4  22.3  201  108-316     8-218 (296)
171 4hgt_A Casein kinase I isoform 100.0 3.1E-40 1.1E-44  350.5  19.5  202  108-317     8-219 (296)
172 2iwi_A Serine/threonine-protei 100.0 2.5E-40 8.5E-45  355.9  18.0  252  109-459    31-293 (312)
173 3tt0_A Basic fibroblast growth 100.0 1.1E-39 3.7E-44  363.2  23.5  209  108-325    68-306 (382)
174 2rio_A Serine/threonine-protei 100.0 1.2E-39 4.1E-44  369.9  24.1  257  109-455    15-301 (434)
175 1luf_A Muscle-specific tyrosin 100.0 5.5E-40 1.9E-44  356.9  20.0  208  108-325    46-289 (343)
176 2ivs_A Proto-oncogene tyrosine 100.0 4.9E-40 1.7E-44  352.5  19.3  204  108-321    22-261 (314)
177 3ll6_A Cyclin G-associated kin 100.0 4.7E-40 1.6E-44  355.1  19.2  199  109-316    28-256 (337)
178 3op5_A Serine/threonine-protei 100.0 1.8E-39 6.1E-44  358.5  24.1  205  107-316    33-264 (364)
179 2yfx_A Tyrosine-protein kinase 100.0 6.2E-40 2.1E-44  355.9  19.7  256  108-455    29-303 (327)
180 3cbl_A C-FES, proto-oncogene t 100.0 4.2E-40 1.4E-44  366.2  18.7  205  108-323   113-326 (377)
181 3p23_A Serine/threonine-protei 100.0 2.1E-40 7.3E-45  376.5  16.5  199  109-317    24-234 (432)
182 3aln_A Dual specificity mitoge 100.0 2.8E-40 9.4E-45  358.3  16.0  200  108-316    21-232 (327)
183 3t9t_A Tyrosine-protein kinase 100.0 1.3E-39 4.6E-44  341.1  20.6  205  109-325     8-218 (267)
184 4f0f_A Serine/threonine-protei 100.0 1.4E-39 4.7E-44  345.5  20.8  200  108-317    18-232 (287)
185 1t46_A HOMO sapiens V-KIT hard 100.0 2.6E-39 8.8E-44  346.7  23.1  203  109-320    23-255 (313)
186 4eut_A Serine/threonine-protei 100.0 4.7E-40 1.6E-44  368.1  17.2  201  108-315     8-225 (396)
187 3dtc_A Mitogen-activated prote 100.0 1.2E-39 4.1E-44  342.6  19.0  203  108-322     6-223 (271)
188 4fvq_A Tyrosine-protein kinase 100.0 1.1E-39 3.7E-44  346.2  18.6  202  108-318     7-224 (289)
189 1mp8_A Focal adhesion kinase 1 100.0 1.5E-39 5.1E-44  345.0  19.6  205  108-324    14-229 (281)
190 3ugc_A Tyrosine-protein kinase 100.0 1.7E-39 5.8E-44  346.6  20.1  197  108-315     9-219 (295)
191 1opk_A P150, C-ABL, proto-onco 100.0 1.1E-39 3.6E-44  376.6  19.8  205  108-322   219-429 (495)
192 1k9a_A Carboxyl-terminal SRC k 100.0 2.6E-39 8.9E-44  368.7  22.6  203  108-323   192-397 (450)
193 1p4o_A Insulin-like growth fac 100.0 1.2E-39 4.1E-44  351.6  18.7  207  109-325    25-253 (322)
194 2a19_B Interferon-induced, dou 100.0 4.3E-39 1.5E-43  339.8  22.1  192  109-313    11-221 (284)
195 3lb7_A RAF proto-oncogene seri 100.0 1.5E-39   5E-44  351.6  18.7  255  108-457    35-301 (307)
196 3m2w_A MAP kinase-activated pr 100.0 2.5E-39 8.6E-44  347.1  19.9  243  108-457    16-264 (299)
197 2v62_A Serine/threonine-protei 100.0 3.2E-39 1.1E-43  354.0  20.9  198  108-315    36-262 (345)
198 1rjb_A FL cytokine receptor; k 100.0 2.3E-39   8E-44  353.0  19.6  204  108-320    44-282 (344)
199 2pvf_A Fibroblast growth facto 100.0 6.1E-39 2.1E-43  349.5  22.8  209  108-325    34-272 (334)
200 3poz_A Epidermal growth factor 100.0 2.1E-39 7.1E-44  352.9  18.8  202  108-321    14-228 (327)
201 1qcf_A Haematopoetic cell kina 100.0 3.2E-39 1.1E-43  368.2  21.2  207  108-326   187-399 (454)
202 3q4u_A Activin receptor type-1 100.0 1.8E-39   6E-44  346.1  17.6  187  108-309     7-219 (301)
203 1qpc_A LCK kinase; alpha beta  100.0 4.6E-39 1.6E-43  340.1  20.7  206  108-325    12-223 (279)
204 2jii_A Serine/threonine-protei 100.0 1.6E-39 5.5E-44  357.0  17.6  196  108-317    41-272 (352)
205 4e5w_A Tyrosine-protein kinase 100.0 7.4E-39 2.5E-43  341.9  22.1  195  109-314    21-230 (302)
206 1byg_A CSK, protein (C-termina 100.0 2.5E-39 8.5E-44  342.4  17.4  200  108-320    20-222 (278)
207 3kmu_A ILK, integrin-linked ki 100.0 4.5E-39 1.6E-43  336.8  19.2  204  108-325     9-223 (271)
208 2xir_A Vascular endothelial gr 100.0 4.5E-39 1.5E-43  345.3  19.4  202  108-318    26-256 (316)
209 1fvr_A Tyrosine-protein kinase 100.0 3.4E-39 1.2E-43  350.0  18.6  205  109-322    25-251 (327)
210 3cc6_A Protein tyrosine kinase 100.0 1.1E-38 3.7E-43  338.0  22.0  203  108-322    11-224 (281)
211 3kex_A Receptor tyrosine-prote 100.0 1.1E-39 3.6E-44  354.5  14.4  203  108-322    12-227 (325)
212 3sv0_A Casein kinase I-like; t 100.0   5E-39 1.7E-43  370.5  20.8  203  108-318     6-218 (483)
213 2h34_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43  344.2  21.6  199  108-318    33-240 (309)
214 1u59_A Tyrosine-protein kinase 100.0 1.6E-38 5.4E-43  338.2  22.6  204  109-324     9-225 (287)
215 2i1m_A Macrophage colony-stimu 100.0 8.5E-39 2.9E-43  347.0  20.7  205  108-321    45-275 (333)
216 3g2f_A Bone morphogenetic prot 100.0 1.3E-39 4.5E-44  353.4  14.0  191  108-313    12-235 (336)
217 1mqb_A Ephrin type-A receptor  100.0 2.1E-38 7.2E-43  346.1  23.1  208  107-325    42-263 (333)
218 1xbb_A Tyrosine-protein kinase 100.0 2.5E-38 8.4E-43  337.4  22.5  203  109-324    16-232 (291)
219 3lxl_A Tyrosine-protein kinase 100.0   9E-39 3.1E-43  346.8  18.8  198  108-316    22-233 (327)
220 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 8.7E-39   3E-43  364.6  19.5  206  108-325   183-394 (452)
221 2buj_A Serine/threonine-protei 100.0 7.4E-39 2.5E-43  344.7  17.9  197  108-314    28-247 (317)
222 2eva_A TAK1 kinase - TAB1 chim 100.0 2.8E-38 9.5E-43  341.0  22.4  195  108-316     7-206 (307)
223 3lzb_A Epidermal growth factor 100.0 9.5E-39 3.2E-43  348.3  18.9  202  108-321    14-228 (327)
224 2qol_A Ephrin receptor; recept 100.0 5.7E-39   2E-43  357.3  17.5  207  108-325    44-263 (373)
225 3og7_A AKAP9-BRAF fusion prote 100.0 2.7E-38 9.2E-43  337.1  21.7  204  108-326    23-238 (289)
226 2wqm_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42  338.9  22.6  198  109-316    32-239 (310)
227 3e7e_A HBUB1, BUB1A, mitotic c 100.0 8.9E-39   3E-43  352.8  18.2  202  108-315    64-287 (365)
228 3brb_A Proto-oncogene tyrosine 100.0 2.3E-38   8E-43  340.6  20.2  206  108-323    33-260 (313)
229 3f66_A Hepatocyte growth facto 100.0 2.2E-38 7.6E-43  338.0  19.6  203  109-322    25-242 (298)
230 3pls_A Macrophage-stimulating  100.0 2.8E-38 9.7E-43  336.3  20.4  201  109-320    21-236 (298)
231 3mdy_A Bone morphogenetic prot 100.0   3E-38   1E-42  342.0  20.4  191  108-313    36-252 (337)
232 2h8h_A Proto-oncogene tyrosine 100.0 1.8E-38 6.1E-43  369.9  20.0  206  108-325   266-477 (535)
233 2qkw_B Protein kinase; three-h 100.0 4.9E-39 1.7E-43  347.9  13.6  199  108-317    38-245 (321)
234 3dzo_A Rhoptry kinase domain;  100.0 1.7E-39 5.7E-44  366.3   9.6  204  109-316    78-320 (413)
235 1u46_A ACK-1, activated CDC42  100.0 3.7E-38 1.3E-42  334.3  17.9  206  108-325    17-237 (291)
236 3lxp_A Non-receptor tyrosine-p 100.0 6.1E-38 2.1E-42  339.6  19.5  194  109-315    31-239 (318)
237 3uim_A Brassinosteroid insensi 100.0 4.7E-39 1.6E-43  348.0  10.5  196  108-314    29-236 (326)
238 2nru_A Interleukin-1 receptor- 100.0 9.7E-38 3.3E-42  334.4  17.7  196  110-318    32-239 (307)
239 3c1x_A Hepatocyte growth facto 100.0   4E-38 1.4E-42  350.8  15.0  201  109-320    89-304 (373)
240 1b6c_B TGF-B superfamily recep 100.0 2.5E-37 8.6E-42  335.8  20.6  186  109-309    42-253 (342)
241 2vuw_A Serine/threonine-protei 100.0 3.1E-39   1E-43  352.1   5.5  198  109-314    20-278 (336)
242 2w1i_A JAK2; chromosomal rearr 100.0 5.5E-37 1.9E-41  332.9  23.0  197  108-315    40-250 (326)
243 4fl3_A Tyrosine-protein kinase 100.0 6.5E-37 2.2E-41  364.0  22.8  205  109-326   368-586 (635)
244 3gxj_A TGF-beta receptor type- 100.0 8.2E-39 2.8E-43  340.7   4.5  190  109-313     3-218 (303)
245 3qa8_A MGC80376 protein; kinas 100.0 1.7E-38 5.7E-43  377.3   7.6  203  109-318    14-228 (676)
246 2ozo_A Tyrosine-protein kinase 100.0 8.7E-37   3E-41  361.5  21.6  205  109-325   335-552 (613)
247 2j0j_A Focal adhesion kinase 1 100.0 7.1E-36 2.4E-40  356.3  23.8  207  108-326   389-606 (656)
248 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.7E-37 1.3E-41  331.3   9.3  202  109-325    33-255 (319)
249 3uqc_A Probable conserved tran 100.0 1.3E-35 4.5E-40  318.3  15.8  171  109-317    31-206 (286)
250 2pzi_A Probable serine/threoni 100.0   4E-36 1.4E-40  359.6  12.6  190  109-315    80-278 (681)
251 4azs_A Methyltransferase WBDD;  99.9 1.2E-28 3.9E-33  289.6   5.1  181  116-311   241-436 (569)
252 3en9_A Glycoprotease, O-sialog  99.9 3.6E-24 1.2E-28  250.0   8.1  178  112-313   339-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.8 8.8E-22   3E-26  211.2   9.9  144  109-287    90-253 (282)
254 1zth_A RIO1 serine protein kin  99.8 5.8E-19   2E-23  186.4  12.8  139  109-266    47-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.6 1.1E-15 3.7E-20  171.0   9.7  140  110-267    96-266 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.2 7.7E-11 2.6E-15  123.1  12.5  138  109-264    14-212 (263)
257 1nd4_A Aminoglycoside 3'-phosp  99.0 4.9E-10 1.7E-14  115.7  10.3  136  109-264    20-213 (264)
258 3dxp_A Putative acyl-COA dehyd  98.9 3.3E-09 1.1E-13  116.3  10.7  141  113-265    42-248 (359)
259 3sg8_A APH(2'')-ID; antibiotic  98.9 3.3E-09 1.1E-13  113.8   8.5  183  115-313    26-287 (304)
260 3tdw_A Gentamicin resistance p  98.4 2.2E-06 7.5E-11   92.2  14.1  138  114-265    24-224 (306)
261 3r70_A Aminoglycoside phosphot  98.4 1.7E-06 5.8E-11   93.5  12.4  134  112-265    40-237 (320)
262 4gkh_A Aminoglycoside 3'-phosp  98.3 1.8E-05 6.2E-10   82.4  16.9  132  116-264    31-222 (272)
263 2olc_A MTR kinase, methylthior  98.1 1.4E-05 4.6E-10   88.8  12.0   77  114-196    35-119 (397)
264 3ovc_A Hygromycin-B 4-O-kinase  98.0 1.5E-05 5.2E-10   88.0  11.2   74  112-196    44-118 (362)
265 2q83_A YTAA protein; 2635576,   97.9 5.6E-05 1.9E-09   81.0  12.3   76  114-196    37-115 (346)
266 3d1u_A Putative fructosamine-3  97.9 4.6E-05 1.6E-09   81.5  11.3   77  111-196    17-94  (288)
267 3ats_A Putative uncharacterize  97.9 2.3E-05   8E-10   85.3   8.5   81  112-196    23-117 (357)
268 3dxq_A Choline/ethanolamine ki  97.4 0.00033 1.1E-08   74.6   8.9   69  114-196    23-92  (301)
269 2pyw_A Uncharacterized protein  97.4  0.0006 2.1E-08   76.3  11.2   75  114-196    39-122 (420)
270 3jr1_A Putative fructosamine-3  97.3  0.0013 4.5E-08   71.2  13.2   75  114-196    41-115 (312)
271 1zyl_A Hypothetical protein YI  97.0  0.0044 1.5E-07   66.2  13.3   74  116-196    33-111 (328)
272 3feg_A Choline/ethanolamine ki  96.9  0.0028 9.5E-08   70.5  10.4  140  115-264    56-253 (379)
273 3f7w_A Putative fructosamine-3  96.9  0.0047 1.6E-07   65.1  11.5   78  109-195    15-93  (288)
274 3c5i_A Choline kinase; choline  96.7  0.0022 7.6E-08   70.2   7.8   73  114-196    38-118 (369)
275 3csv_A Aminoglycoside phosphot  96.7  0.0033 1.1E-07   67.6   8.5   35  231-265   182-217 (333)
276 2ppq_A HSK, HK, homoserine kin  96.6    0.01 3.5E-07   63.1  11.8   79  113-196    26-107 (322)
277 2qg7_A Ethanolamine kinase PV0  96.5   0.014 4.9E-07   66.4  12.9   73  114-196   113-185 (458)
278 1nw1_A Choline kinase (49.2 KD  96.5   0.013 4.4E-07   66.0  12.4   72  114-196    78-156 (429)
279 3i1a_A Spectinomycin phosphotr  96.2   0.027 9.1E-07   61.2  12.1   68  118-196    32-105 (339)
280 2yle_A Protein spire homolog 1  95.8   0.044 1.5E-06   56.4  10.9   97  197-308    34-131 (229)
281 3f2s_A CK, chetk-alpha, cholin  95.5   0.043 1.5E-06   61.4  10.3   32  233-264   245-279 (401)
282 3mes_A Choline kinase; malaria  94.7   0.032 1.1E-06   62.9   6.4   73  114-196    75-154 (424)
283 3g15_A CK, chetk-alpha, cholin  92.9    0.34 1.2E-05   53.7  10.3   32  233-264   245-279 (401)
284 4ann_A ESSB; membrane protein,  48.9      37  0.0013   34.4   7.5  113  170-313    43-157 (215)
285 4ano_A ESSB; membrane protein,  41.8      68  0.0023   32.6   8.1  111  170-313    48-162 (219)
286 3cxl_A N-chimerin; SH2, RHO-GA  31.8     5.1 0.00017   45.3  -2.4   59  114-182   147-214 (463)
287 3h0g_A DNA-directed RNA polyme  25.5      15  0.0005   48.2   0.0   11  210-220  1040-1050(1752)
288 1cja_A Protein (actin-fragmin   23.2 2.9E+02  0.0099   29.8   9.5   78  186-267   156-239 (342)

No 1  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=2.5e-55  Score=485.30  Aligned_cols=255  Identities=23%  Similarity=0.412  Sum_probs=219.8

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ...+|+++++||+|+||+||+|+++.+++.||||+++... ...+.+.+|+++|+.|       .|||||+++++|.+++
T Consensus        72 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-------~HpnIV~l~~~~~~~~  144 (346)
T 4fih_A           72 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-------QHENVVEMYNSYLVGD  144 (346)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHC-------CCTTBCCEEEEEEETT
T ss_pred             hhHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhC-------CCCCCCcEEEEEEECC
Confidence            3468999999999999999999999999999999997432 3345678999999999       6899999999999999


Q ss_pred             eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .+|||||||. |+|.+++...   .+++.+++.|++||+.||+|||++|||||||||+||||+   .++.+||+|||+|+
T Consensus       145 ~~~ivmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla~  218 (346)
T 4fih_A          145 ELWVVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCA  218 (346)
T ss_dssp             EEEEEECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             EEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEC---CCCCEEEecCcCce
Confidence            9999999998 5888887653   599999999999999999999999999999999999995   67899999999997


Q ss_pred             ccCC---cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          265 TEDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       265 ~~~~---~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ....   .....+||+.|||||++.+..|+.++||||||||+|||++|++||.+.+..+.+..|.....   +.      
T Consensus       219 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~------  289 (346)
T 4fih_A          219 QVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PR------  289 (346)
T ss_dssp             ECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSC---CC------
T ss_pred             ecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CC------
Confidence            6533   34567999999999999999999999999999999999999999999888777766544111   00      


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                                                +.....
T Consensus       290 --------------------------------------------------------------------------~~~~~~  295 (346)
T 4fih_A          290 --------------------------------------------------------------------------LKNLHK  295 (346)
T ss_dssp             --------------------------------------------------------------------------CSCGGG
T ss_pred             --------------------------------------------------------------------------CCcccc
Confidence                                                                                      000112


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      +++++.|||.+||+.||++|||++|||+||||++..
T Consensus       296 ~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~  331 (346)
T 4fih_A          296 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  331 (346)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence            457899999999999999999999999999999753


No 2  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=4.7e-55  Score=483.86  Aligned_cols=253  Identities=24%  Similarity=0.353  Sum_probs=216.9

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|+++++||+|+||+||+|+++.+++.||||++++.   ....+.+.+|+++|++|       .|||||+++++|.+++
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-------~HpnIV~~~~~~~~~~   96 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM-------KHPNIVQYRESFEENG   96 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEEEETT
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHC-------CCCCCCcEEEEEEECC
Confidence            7999999999999999999999999999999999753   34567789999999999       6899999999999999


Q ss_pred             eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .+|||||||. |+|.+++.......+++.+++.|+.||+.||+|||++|||||||||+||||+   .++.+||+|||+|+
T Consensus        97 ~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla~  173 (350)
T 4b9d_A           97 SLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGIAR  173 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC---TTCCEEECSTTEES
T ss_pred             EEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCCEEEcccccce
Confidence            9999999998 5999999876656689999999999999999999999999999999999995   67899999999998


Q ss_pred             ccCCc---ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          265 TEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       265 ~~~~~---~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      .....   ....+||+.|||||++.+..|+.++||||||||||||++|++||.+.+..+++.+|.+..  .|+       
T Consensus       174 ~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~--~~~-------  244 (350)
T 4b9d_A          174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS--FPP-------  244 (350)
T ss_dssp             CCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC--CCC-------
T ss_pred             eecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC--CCC-------
Confidence            76543   245689999999999999999999999999999999999999999998888777765411  000       


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                                       .           ...
T Consensus       245 -----------------------------------------------------------------~-----------~~~  248 (350)
T 4b9d_A          245 -----------------------------------------------------------------V-----------SLH  248 (350)
T ss_dssp             -----------------------------------------------------------------C-----------CTT
T ss_pred             -----------------------------------------------------------------C-----------Ccc
Confidence                                                                             0           001


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      +++++.+||.+||+.||++|||++|||+||||++.
T Consensus       249 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          249 YSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence            34678999999999999999999999999999863


No 3  
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=5.5e-55  Score=476.04  Aligned_cols=254  Identities=26%  Similarity=0.457  Sum_probs=221.6

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ++|+++++||+|+||+||+|+++.+++.||||++++.    ....+.+.+|+++|+.|       +|||||+++++|+++
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l-------~HpnIv~l~~~~~~~  104 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-------DHPFFVKLYFTFQDD  104 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-------CCTTBCCEEEEEECS
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhC-------CCCCCCeEEEEEEeC
Confidence            6799999999999999999999999999999999753    23456788999999988       689999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +.+|||||||. |+|.+++...  +.++|.+++.+++||+.||+|||++|||||||||+||||+   .++.+||+|||+|
T Consensus       105 ~~~yivmEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~---~~g~vKl~DFGla  179 (311)
T 4aw0_A          105 EKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTA  179 (311)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             CEEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEc---CCCCEEEEEcCCc
Confidence            99999999998 5999999765  4699999999999999999999999999999999999995   6789999999999


Q ss_pred             cccC-----CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHH
Q 003239          264 CTED-----RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL  338 (837)
Q Consensus       264 ~~~~-----~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l  338 (837)
                      +...     ....+.+||+.|||||++.+..|+.++||||||||+|||++|++||.+.+..+++.+|.+.-- .      
T Consensus       180 ~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~-~------  252 (311)
T 4aw0_A          180 KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEY-D------  252 (311)
T ss_dssp             EECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-C------
T ss_pred             eecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-C------
Confidence            7543     223467999999999999999999999999999999999999999999888877777654100 0      


Q ss_pred             HhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhh
Q 003239          339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK  418 (837)
Q Consensus       339 ~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~  418 (837)
                                                                                        +|            
T Consensus       253 ------------------------------------------------------------------~p------------  254 (311)
T 4aw0_A          253 ------------------------------------------------------------------FP------------  254 (311)
T ss_dssp             ------------------------------------------------------------------CC------------
T ss_pred             ------------------------------------------------------------------CC------------
Confidence                                                                              00            


Q ss_pred             hHHhHHHHHHHHHHhcccCcCCCCCHHH------HHcCccCCCCCCCC
Q 003239          419 ESQIRLALVDFLKGLVEFDPAKRWSPFQ------ASRHPFVTGEPFTC  460 (837)
Q Consensus       419 ~~~~s~~l~DLL~kmL~~DP~kRpTa~E------aL~HPff~~~~~~~  460 (837)
                       ..++++++|||++||+.||++|+|++|      +++||||++..|..
T Consensus       255 -~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~  301 (311)
T 4aw0_A          255 -EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWEN  301 (311)
T ss_dssp             -TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTT
T ss_pred             -cccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHH
Confidence             013467899999999999999999988      58999999987754


No 4  
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.2e-54  Score=466.22  Aligned_cols=249  Identities=24%  Similarity=0.388  Sum_probs=204.6

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ++|++++.||+|+||+||+|+++.+++.||||++++.    ....+.+.+|+++|+.+       .|||||+++++|.++
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l-------~HpnIv~~~~~~~~~   85 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-------RHPHIIKLYDVIKSK   85 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHC-------CCTTBCCEEEEEECS
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHC-------CCCCCCeEEEEEEEC
Confidence            6899999999999999999999999999999999753    23356788999999999       689999999999999


Q ss_pred             ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          185 RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       185 ~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      +.+|||||||+|+|.+++...  +.+++.+++.+++||+.||+|||++|||||||||+|||++   .++.+||+|||+|+
T Consensus        86 ~~~~ivmEy~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~---~~~~vkl~DFGla~  160 (275)
T 3hyh_A           86 DEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSN  160 (275)
T ss_dssp             SEEEEEEECCCEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTCCEEECCSSCC-
T ss_pred             CEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEEC---CCCCEEEeecCCCe
Confidence            999999999999999998765  4699999999999999999999999999999999999995   67899999999997


Q ss_pred             ccCC--cceeeccCccccCchhhcCCCC-CccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          265 TEDR--TVYSYIQSRYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       265 ~~~~--~~~~~~GT~~Y~APEvl~~~~y-t~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ....  .....+||+.|||||++.+..| +.++|||||||++|||++|++||.+.+..+.+..+.+..-   +       
T Consensus       161 ~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~---~-------  230 (275)
T 3hyh_A          161 IMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY---T-------  230 (275)
T ss_dssp             --------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC---C-------
T ss_pred             ecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC---C-------
Confidence            5432  3456799999999999999876 5799999999999999999999998877666655543100   0       


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                                     +|             ..
T Consensus       231 ---------------------------------------------------------------~p-------------~~  234 (275)
T 3hyh_A          231 ---------------------------------------------------------------LP-------------KF  234 (275)
T ss_dssp             ---------------------------------------------------------------CC-------------TT
T ss_pred             ---------------------------------------------------------------CC-------------CC
Confidence                                                                           00             01


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                      +++++.|||++||+.||++|||++|+|+||||+.
T Consensus       235 ~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          235 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence            3467899999999999999999999999999975


No 5  
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.2e-53  Score=481.03  Aligned_cols=281  Identities=30%  Similarity=0.538  Sum_probs=229.1

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|+++++||+|+||+||+|+++.+++.||||++++.   ....+.+++|+++|+.|       .|||||++++++...
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l-------~HpnIv~l~~~~~~~  125 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF-------KHDNIIAIKDILRPT  125 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHC-------CCTTBCCEEEECCCS
T ss_pred             CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhc-------CCCCcceEeeeeecc
Confidence            36899999999999999999999999999999999753   34456788999999999       689999999998643


Q ss_pred             ------ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEE
Q 003239          185 ------RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII  258 (837)
Q Consensus       185 ------~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~  258 (837)
                            +++|||||||+|+|.+++...  +.+++.+++.|++||+.||+|||++|||||||||+|||++   .++.+||+
T Consensus       126 ~~~~~~~~~~ivmE~~~g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~---~~~~~Ki~  200 (398)
T 4b99_A          126 VPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN---ENCELKIG  200 (398)
T ss_dssp             SCTTTCCCEEEEEECCSEEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTCCEEEC
T ss_pred             cccccCCEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccC---CCCCEEEe
Confidence                  679999999999999988654  4799999999999999999999999999999999999995   67899999


Q ss_pred             ecccccccC-------CcceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Q 003239          259 DFGSACTED-------RTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG  330 (837)
Q Consensus       259 DFGlA~~~~-------~~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG  330 (837)
                      |||+|+...       ......+||+.|||||++.+. .|+.++||||||||+|||++|++||.+.+..+++..|.+..|
T Consensus       201 DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g  280 (398)
T 4b99_A          201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLG  280 (398)
T ss_dssp             CCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHC
T ss_pred             ecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcC
Confidence            999997542       223467999999999999886 569999999999999999999999999999999999999999


Q ss_pred             CCCchHHHHhhhcc--hhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCC
Q 003239          331 AQPPDYVLKEAKNT--SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYR  408 (837)
Q Consensus       331 ~~Pp~~~l~~~k~~--~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~  408 (837)
                       .|+...+......  ..++...                                  +     .+....++.+.+     
T Consensus       281 -~p~~~~~~~~~~~~~~~~~~~~----------------------------------~-----~~~~~~~~~~~~-----  315 (398)
T 4b99_A          281 -TPSPAVIQAVGAERVRAYIQSL----------------------------------P-----PRQPVPWETVYP-----  315 (398)
T ss_dssp             -CCCGGGTC-----CHHHHHHSS----------------------------------C-----CCCCCCHHHHST-----
T ss_pred             -CCChHHhhhhhhhhhhhhhhcC----------------------------------C-----CcCCCCHHHhCC-----
Confidence             4443322211100  0000000                                  0     011122333222     


Q ss_pred             CCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          409 KNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       409 ~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                                  ..+++++|||++||++||++|+||+|||+||||++..
T Consensus       316 ------------~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          316 ------------GADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             ------------TCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             ------------CCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence                        2457899999999999999999999999999999854


No 6  
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=4.4e-54  Score=486.71  Aligned_cols=255  Identities=23%  Similarity=0.408  Sum_probs=220.0

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ..++|+++++||+|+||+||+|+++.+++.||||+++... ...+.+.+|+.+|+.|       .|||||+++++|.+++
T Consensus       149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l-------~HpnIV~l~~~~~~~~  221 (423)
T 4fie_A          149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-------QHENVVEMYNSYLVGD  221 (423)
T ss_dssp             GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHC-------CCTTBCCEEEEEEETT
T ss_pred             hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhC-------CCCCCCceEEEEEECC
Confidence            4478999999999999999999999999999999997532 3345688999999999       6899999999999999


Q ss_pred             eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .+|||||||. |+|.+++...   .+++.+++.|++||+.||+|||++|||||||||+||||+   .++.+||+|||+|+
T Consensus       222 ~~~iVmEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~---~~g~vKl~DFGla~  295 (423)
T 4fie_A          222 ELWVVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFCA  295 (423)
T ss_dssp             EEEEEEECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC---TTCCEEECCCTTCE
T ss_pred             EEEEEEeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc---CCCCEEEecCccce
Confidence            9999999998 5888888653   599999999999999999999999999999999999995   67899999999997


Q ss_pred             ccCC---cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          265 TEDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       265 ~~~~---~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ....   .....+||+.|||||++.+..|+.++||||||||+|||++|++||.+.+..+.+..|.....   +..     
T Consensus       296 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~---~~~-----  367 (423)
T 4fie_A          296 QVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLP---PRL-----  367 (423)
T ss_dssp             ECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CCC-----
T ss_pred             ECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCC---CCC-----
Confidence            6533   34567999999999999999999999999999999999999999999888777766544111   000     


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                                                 .....
T Consensus       368 ---------------------------------------------------------------------------~~~~~  372 (423)
T 4fie_A          368 ---------------------------------------------------------------------------KNLHK  372 (423)
T ss_dssp             ---------------------------------------------------------------------------SCTTS
T ss_pred             ---------------------------------------------------------------------------ccccc
Confidence                                                                                       00012


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      ++++++|||.+||+.||++|+|++|||+||||++..
T Consensus       373 ~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~  408 (423)
T 4fie_A          373 VSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  408 (423)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence            457899999999999999999999999999999743


No 7  
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=5e-54  Score=467.47  Aligned_cols=252  Identities=25%  Similarity=0.411  Sum_probs=211.0

Q ss_pred             CceEEEEEeccCCceeEEEeec---cCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWD---AEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~---~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      ++|+++++||+|+||+||+|++   ..+++.||||++++..   .....+.+|+++|++|       +|||||+++++|.
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-------~HpnIv~l~~~~~   96 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV-------NHPFIVKLHYAFQ   96 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC-------CCTTEECEEEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC-------CCCCCCeEEEEEE
Confidence            6899999999999999999976   3568899999997532   2234567788888777       6999999999999


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      +++.+|||||||. |+|.+++...  +.+++.+++.+++||+.||+|||++|||||||||+|||++   .++.+||+|||
T Consensus        97 ~~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFG  171 (304)
T 3ubd_A           97 TEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFG  171 (304)
T ss_dssp             ETTEEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---TTSCEEEESSE
T ss_pred             ECCEEEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEc---CCCCEEecccc
Confidence            9999999999998 5999998765  3699999999999999999999999999999999999995   67899999999


Q ss_pred             cccccC---CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHH
Q 003239          262 SACTED---RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL  338 (837)
Q Consensus       262 lA~~~~---~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l  338 (837)
                      +|+...   ......+||+.|||||++.+..|+.++||||||||+|||++|++||.+.+..+++..|.+..-   +    
T Consensus       172 la~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~---~----  244 (304)
T 3ubd_A          172 LSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKL---G----  244 (304)
T ss_dssp             EEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC---C----
T ss_pred             cceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCC---C----
Confidence            997532   334567899999999999999999999999999999999999999999888877776654110   0    


Q ss_pred             HhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhh
Q 003239          339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK  418 (837)
Q Consensus       339 ~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~  418 (837)
                                                                                        +|            
T Consensus       245 ------------------------------------------------------------------~p------------  246 (304)
T 3ubd_A          245 ------------------------------------------------------------------MP------------  246 (304)
T ss_dssp             ------------------------------------------------------------------CC------------
T ss_pred             ------------------------------------------------------------------CC------------
Confidence                                                                              00            


Q ss_pred             hHHhHHHHHHHHHHhcccCcCCCCC-----HHHHHcCccCCCCCC
Q 003239          419 ESQIRLALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPF  458 (837)
Q Consensus       419 ~~~~s~~l~DLL~kmL~~DP~kRpT-----a~EaL~HPff~~~~~  458 (837)
                       ..+++++.|||++||+.||++|||     ++|+|+||||++..|
T Consensus       247 -~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw  290 (304)
T 3ubd_A          247 -QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDW  290 (304)
T ss_dssp             -TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             -CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCH
Confidence             013467899999999999999998     589999999998665


No 8  
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=1.7e-52  Score=452.63  Aligned_cols=253  Identities=23%  Similarity=0.359  Sum_probs=208.1

Q ss_pred             Cce-EEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee-
Q 003239          109 RRY-IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC-  183 (837)
Q Consensus       109 ~~Y-~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~-  183 (837)
                      .+| ++.++||+|+||+||+|+++.+++.||||++...   ....+.+.+|+++|++|       .|||||+++++|.. 
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l-------~HpnIV~~~~~~~~~   97 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-------QHPNIVRFYDSWEST   97 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTC-------CCTTBCCEEEEEEEE
T ss_pred             CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhC-------CCCCCCcEEEEEeec
Confidence            444 7888999999999999999999999999999743   34556788999999999       68999999999976 


Q ss_pred             ---cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCC--eeeccCCCCCeeeeccCCCCeEEE
Q 003239          184 ---QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG--IIHCDLKPENILLCTSVKPAEIKI  257 (837)
Q Consensus       184 ---~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~g--IVHrDLKPeNILl~~~~~~~~IKL  257 (837)
                         ++.+|||||||. |+|.+++...  +.+++..++.|++||+.||+|||+++  ||||||||+||||+  ..++.+||
T Consensus        98 ~~~~~~~~lvmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~--~~~g~vKl  173 (290)
T 3fpq_A           98 VKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKI  173 (290)
T ss_dssp             ETTEEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES--STTSCEEE
T ss_pred             cCCCcEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE--CCCCCEEE
Confidence               357899999998 5999998765  46999999999999999999999998  99999999999995  34678999


Q ss_pred             EecccccccC-CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchH
Q 003239          258 IDFGSACTED-RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY  336 (837)
Q Consensus       258 ~DFGlA~~~~-~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~  336 (837)
                      +|||+|+... ......+||+.|||||++.+ .|+.++||||||||||||+||++||.+.+....+.+.+.. + ..|..
T Consensus       174 ~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~-~-~~~~~  250 (290)
T 3fpq_A          174 GDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-G-VKPAS  250 (290)
T ss_dssp             CCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-T-CCCGG
T ss_pred             EeCcCCEeCCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHc-C-CCCCC
Confidence            9999997544 33456799999999999875 6999999999999999999999999776544433222110 0 00000


Q ss_pred             HHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhh
Q 003239          337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI  416 (837)
Q Consensus       337 ~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l  416 (837)
                                                                                                      
T Consensus       251 --------------------------------------------------------------------------------  250 (290)
T 3fpq_A          251 --------------------------------------------------------------------------------  250 (290)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       417 ~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                       .....++++.+||.+||+.||++|||++|+|+||||+++
T Consensus       251 -~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          251 -FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             -GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             -CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence             001134678999999999999999999999999999874


No 9  
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=3.7e-52  Score=463.17  Aligned_cols=304  Identities=22%  Similarity=0.348  Sum_probs=219.2

Q ss_pred             CCceEEEEEeccCCceeEEEeecc---CCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDA---EMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~---~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|+++++||+|+||+||+|+++   .+++.||||++.+.. ...++.+|+++|+.+.      +|||||+++++|.++
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~------~h~nIv~l~~~~~~~   92 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAG------GQDNVMGVKYCFRKN   92 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTC------SBTTBCCCSEEEEET
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhc------CCCCCceEEEEEEEC
Confidence            378999999999999999999764   467899999997653 3456788999999884      589999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +++|||||||+ ++|.+++.     .+++.+++.+++||+.||+|||++|||||||||+|||++  .+.+.+||+|||+|
T Consensus        93 ~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~--~~~~~~kl~DFGla  165 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYN--RRLKKYALVDFGLA  165 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECCCTTC
T ss_pred             CEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEe--CCCCeEEECcCCCC
Confidence            99999999997 58888773     499999999999999999999999999999999999996  34479999999999


Q ss_pred             cccCC-------------------------------cceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCC
Q 003239          264 CTEDR-------------------------------TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLP  311 (837)
Q Consensus       264 ~~~~~-------------------------------~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~  311 (837)
                      +....                               .....+||+.|||||++.+. .|+.++||||+|||+|||++|++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~  245 (361)
T 4f9c_A          166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY  245 (361)
T ss_dssp             EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred             cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence            64321                               12345899999999999886 58999999999999999999998


Q ss_pred             CC-CCCCHHHHHHHHHHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCc
Q 003239          312 LF-PGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGK  390 (837)
Q Consensus       312 PF-~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~  390 (837)
                      || .+.++.+++..|.+.+| .++..........  ......          .........+.  ..........|... 
T Consensus       246 Pf~~~~~~~~~l~~I~~~~G-~~~~~~~~~~~~~--~~~~~~----------~~p~~~~~~~~--~~~~~~~~~~p~~~-  309 (361)
T 4f9c_A          246 PFYKASDDLTALAQIMTIRG-SRETIQAAKTFGK--SILCSK----------EVPAQDLRKLC--ERLRGMDSSTPKLT-  309 (361)
T ss_dssp             SSSCCSSHHHHHHHHHHHHC-HHHHHHHHHHTTE--EEEESS----------CCCCCCHHHHH--HHHC-----------
T ss_pred             CCCCCCCHHHHHHHHHHhcC-Cccchhhhhhccc--cccccc----------cCcchhhhHHH--Hhhccccccccccc-
Confidence            88 56678899999999999 3322221111000  000000          00000000000  00000000000000 


Q ss_pred             ccccccchHHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          391 EYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       391 ~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                              ..+...        .........++++++|||++||++||++|+||+|||+||||++.+
T Consensus       310 --------~~~~~~--------~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          310 --------SDIQGH--------ATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             ----------------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             --------cccccc--------cccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence                    000000        001112234668899999999999999999999999999999854


No 10 
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=8.9e-52  Score=455.43  Aligned_cols=202  Identities=24%  Similarity=0.321  Sum_probs=176.3

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC  188 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~  188 (837)
                      +.|++.++||+|+||+||+|+++.+++.||||+++.+..    ..+|+.+|+.|       .|||||+++++|.+++.+|
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l-------~HpnIV~l~~~~~~~~~~~  126 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGL-------SSPRIVPLYGAVREGPWVN  126 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTC-------CCTTBCCEEEEEEETTEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhC-------CCCCCCcEEEEEEECCEEE
Confidence            679999999999999999999999999999999986532    24689888887       6899999999999999999


Q ss_pred             EEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCC-eEEEEeccccccc
Q 003239          189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPA-EIKIIDFGSACTE  266 (837)
Q Consensus       189 LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~-~IKL~DFGlA~~~  266 (837)
                      ||||||. |+|.++++..  +.+++.+++.|+.||+.||+|||+++||||||||+||||+   .++ .+||+|||+|+..
T Consensus       127 ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~~vKl~DFGla~~~  201 (336)
T 4g3f_A          127 IFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS---SDGSRAALCDFGHALCL  201 (336)
T ss_dssp             EEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEC---TTSCCEEECCCTTCEEC
T ss_pred             EEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEe---CCCCEEEEeeCCCCeEc
Confidence            9999998 5999999765  4699999999999999999999999999999999999996   444 6999999999754


Q ss_pred             CCc--------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 003239          267 DRT--------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI  326 (837)
Q Consensus       267 ~~~--------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~  326 (837)
                      ...        ....+||+.|||||++.+..|+.++||||||||||||++|++||.+.+..+++.+|.
T Consensus       202 ~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~  269 (336)
T 4g3f_A          202 QPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA  269 (336)
T ss_dssp             ------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH
T ss_pred             cCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH
Confidence            321        123579999999999999999999999999999999999999998776555544443


No 11 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=3.5e-50  Score=436.33  Aligned_cols=253  Identities=23%  Similarity=0.333  Sum_probs=196.6

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc-
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR-  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~-  185 (837)
                      .+|++++.||+|+||+||+|+++.+++.||||+++..  ....+.+.+|+++|++|       .|||||+++++|.+.+ 
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l-------~HpnIV~~~~~~~~~~~   77 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-------EHPGIVRYFNAWLEKNT   77 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEEEEEC-
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhC-------CCCCCCeEEEEEEecCc
Confidence            4699999999999999999999999999999999743  34456788999999988       6899999999998654 


Q ss_pred             -----------eEEEEEeccc-hhHHHHHHhhc-cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCC
Q 003239          186 -----------HLCICFELLD-SNLYELIKINH-FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKP  252 (837)
Q Consensus       186 -----------~l~LVmEy~~-gsL~d~l~~~~-~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~  252 (837)
                                 ++|||||||. |+|.+++.... ....++..++.|+.||++||+|||++|||||||||+||||+   .+
T Consensus        78 ~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~---~~  154 (299)
T 4g31_A           78 TEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT---MD  154 (299)
T ss_dssp             ---------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TT
T ss_pred             cccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEEC---CC
Confidence                       4799999997 58999887543 22356677999999999999999999999999999999996   67


Q ss_pred             CeEEEEecccccccCCc---------------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          253 AEIKIIDFGSACTEDRT---------------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       253 ~~IKL~DFGlA~~~~~~---------------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                      +.+||+|||+|+.....               ....+||+.|||||++.+..|+.++||||||||+|||++   ||..  
T Consensus       155 ~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~--  229 (299)
T 4g31_A          155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST--  229 (299)
T ss_dssp             CCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS--
T ss_pred             CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC--
Confidence            89999999999754321               234589999999999999999999999999999999996   7743  


Q ss_pred             HHHHHHHHHHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccc
Q 003239          318 EFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKH  397 (837)
Q Consensus       318 ~~e~l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~  397 (837)
                      ..+....+........|.                                                              
T Consensus       230 ~~~~~~~~~~~~~~~~p~--------------------------------------------------------------  247 (299)
T 4g31_A          230 QMERVRTLTDVRNLKFPP--------------------------------------------------------------  247 (299)
T ss_dssp             HHHHHHHHHHHHTTCCCH--------------------------------------------------------------
T ss_pred             ccHHHHHHHHHhcCCCCC--------------------------------------------------------------
Confidence            223322222211100000                                                              


Q ss_pred             hHHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          398 LEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       398 L~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                                          .....++.+.+||++||+.||++|||++|+|+||||++..+
T Consensus       248 --------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~~  288 (299)
T 4g31_A          248 --------------------LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLDF  288 (299)
T ss_dssp             --------------------HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC--
T ss_pred             --------------------CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCCC
Confidence                                00113356789999999999999999999999999998654


No 12 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=2e-49  Score=466.14  Aligned_cols=260  Identities=26%  Similarity=0.400  Sum_probs=223.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecce
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH  186 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~  186 (837)
                      .++|++++.||+|+||+||+|+++.+++.||||+++.. ....+.+.+|+++|+.|       +|||||+++++|.+++.
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l-------~hpnIv~l~~~~~~~~~  228 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVL-------RHPTLVNLHDAFEDDNE  228 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHT-------CCTTBCCEEEEEECSSE
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhC-------CCCCCCeEEEEEEECCE
Confidence            37899999999999999999999999999999999864 34566788999999999       68999999999999999


Q ss_pred             EEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       187 l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      +|||||||. |+|.+++.... ..+++.+++.+++||+.||+|||+++||||||||+|||++.+ ..+.+||+|||+|+.
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~~-~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~-~~~~vKl~DFG~a~~  306 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADEH-NKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK-RSNELKLIDFGLTAH  306 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCTT-SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCSSCEE
T ss_pred             EEEEEeecCCCcHHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC-CCCCEEEeeccceeE
Confidence            999999998 58998886543 469999999999999999999999999999999999999632 457899999999986


Q ss_pred             cC--CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhc
Q 003239          266 ED--RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN  343 (837)
Q Consensus       266 ~~--~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~  343 (837)
                      ..  ......+||+.|||||++.+..|+.++||||||||||||++|.+||.+.+..+++..|.+.....++.        
T Consensus       307 ~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~--------  378 (573)
T 3uto_A          307 LDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS--------  378 (573)
T ss_dssp             CCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSG--------
T ss_pred             ccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcc--------
Confidence            54  33456799999999999999999999999999999999999999999998888777665421100000        


Q ss_pred             chhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhH
Q 003239          344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR  423 (837)
Q Consensus       344 ~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s  423 (837)
                                                                                                ....++
T Consensus       379 --------------------------------------------------------------------------~~~~~s  384 (573)
T 3uto_A          379 --------------------------------------------------------------------------AFSGIS  384 (573)
T ss_dssp             --------------------------------------------------------------------------GGTTSC
T ss_pred             --------------------------------------------------------------------------cccCCC
Confidence                                                                                      001245


Q ss_pred             HHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       424 ~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                      ++++|||++||++||++|||++|||+||||+....
T Consensus       385 ~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          385 EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence            77899999999999999999999999999997654


No 13 
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=2e-48  Score=441.53  Aligned_cols=330  Identities=42%  Similarity=0.746  Sum_probs=260.8

Q ss_pred             CCCccCCCCcceEEeeeeeeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhh
Q 003239           84 NDGYDNVNSDLILAVNLVLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLN  163 (837)
Q Consensus        84 ~~g~d~~~~~~~~~l~~~l~~~~~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~  163 (837)
                      +.++++....+....++.+.     .+|+++++||+|+||+||+|++..+++.||||+++......+.+.+|+.+++.++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~-----~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~  151 (429)
T 3kvw_A           77 NGGYDDDQGSYVQVPHDHVA-----YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLR  151 (429)
T ss_dssp             HHTTBCTTSCBCCCTTCEET-----TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccCCCccccCCCccc-----CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHh
Confidence            44555555555444444443     7999999999999999999999999999999999988777788899999999997


Q ss_pred             cccCCCCCCceeEEeEEEeecceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCC
Q 003239          164 KKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPEN  243 (837)
Q Consensus       164 ~~~~~~~HpnIVkl~d~f~~~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeN  243 (837)
                      +. ....|+||+++++++...+++||||||+.++|.+++.......+++..++.++.||+.||+|||+++||||||||+|
T Consensus       152 ~~-~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~N  230 (429)
T 3kvw_A          152 KQ-DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPEN  230 (429)
T ss_dssp             TT-CTTSCSCBCCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGG
T ss_pred             hc-cccCCcCEEEEEeecccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH
Confidence            64 44578999999999999999999999999999999988776679999999999999999999999999999999999


Q ss_pred             eeeeccCCCCe--EEEEecccccccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHH
Q 003239          244 ILLCTSVKPAE--IKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDL  321 (837)
Q Consensus       244 ILl~~~~~~~~--IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~  321 (837)
                      |||+   .++.  +||+|||+++.........++|+.|+|||++.+..++.++||||||||+|||++|.+||.+.+..+.
T Consensus       231 ILl~---~~~~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~  307 (429)
T 3kvw_A          231 ILLK---QQGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQ  307 (429)
T ss_dssp             EEES---STTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             eEEc---cCCCcceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence            9996   3444  9999999998877777778999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCchHHHHhhhcchhhhhhcCCccc-----ccCCccccCCccchhhhhHHHHHHHhhcCCcCCcc--ccc
Q 003239          322 LRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHN-----IENGEVSIGGRSAYQALTEIEYEARELKKPLIGKE--YFH  394 (837)
Q Consensus       322 l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~-----~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~--~f~  394 (837)
                      +..+++.++ .|+..++........++...+....     ...+........                 ....+.  ...
T Consensus       308 l~~i~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~  369 (429)
T 3kvw_A          308 LACMIELLG-MPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGR-----------------SRRGKLRGPPE  369 (429)
T ss_dssp             HHHHHHHHC-CCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEE-----------------CTTCCEECSTT
T ss_pred             HHHHHHHcC-CCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccc-----------------cchhhccCCcc
Confidence            999999999 7777777776666666554331110     000000000000                 000000  000


Q ss_pred             ccchHHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          395 HKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       395 ~~~L~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      ...+...+                ....++.++|||++||++||++|||++|||+||||++.
T Consensus       370 ~~~~~~~l----------------~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          370 SREWGNAL----------------KGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             CSCHHHHT----------------TTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             chhhHhhc----------------cccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence            01111111                11235789999999999999999999999999999974


No 14 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=2.4e-49  Score=468.13  Aligned_cols=261  Identities=24%  Similarity=0.382  Sum_probs=213.5

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      +.++|+++++||+|+||+||+|+++.+++.||||++++..    .......+|..++..++..    +|||||+++++|+
T Consensus       187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~----~HP~IV~l~~~f~  262 (689)
T 3v5w_A          187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG----DCPFIVCMSYAFH  262 (689)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSS----CCTTBCCEEEEEE
T ss_pred             chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhC----CCCCEeEEEEEEE
Confidence            4589999999999999999999999999999999997532    2234455666666666443    8999999999999


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      +.+.+|||||||. |+|.+++...  +.+++..++.+++||+.||+|||++|||||||||+||||+   .++.|||+|||
T Consensus       263 ~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld---~~G~vKL~DFG  337 (689)
T 3v5w_A          263 TPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLG  337 (689)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTSCEEECCCT
T ss_pred             ECCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEe---CCCCEEecccc
Confidence            9999999999998 5999998765  4699999999999999999999999999999999999995   77899999999


Q ss_pred             cccccC-CcceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHH
Q 003239          262 SACTED-RTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       262 lA~~~~-~~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      +|+... ....+.+||+.|||||++.+ ..|+.++||||||||||||++|.+||.+.+..+....+...+. .+      
T Consensus       338 lA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~-~~------  410 (689)
T 3v5w_A          338 LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT-MA------  410 (689)
T ss_dssp             TCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHH-CC------
T ss_pred             eeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC-CC------
Confidence            997654 34456799999999999975 5899999999999999999999999976432211111111000 00      


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                    +                 .+|             
T Consensus       411 ----------------------------------------------~-----------------~~p-------------  414 (689)
T 3v5w_A          411 ----------------------------------------------V-----------------ELP-------------  414 (689)
T ss_dssp             ----------------------------------------------C-----------------CCC-------------
T ss_pred             ----------------------------------------------C-----------------CCC-------------
Confidence                                                          0                 000             


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCCC-----HHHHHcCccCCCCCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPFT  459 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRpT-----a~EaL~HPff~~~~~~  459 (837)
                      ..++++++|||.+||+.||++|++     ++||++||||++..|.
T Consensus       415 ~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~  459 (689)
T 3v5w_A          415 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQ  459 (689)
T ss_dssp             TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHH
T ss_pred             ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHH
Confidence            124578899999999999999998     7999999999998764


No 15 
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=2.1e-47  Score=425.11  Aligned_cols=341  Identities=41%  Similarity=0.737  Sum_probs=263.4

Q ss_pred             cCCCccCCCCcceEEeeeeeeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHh
Q 003239           83 LNDGYDNVNSDLILAVNLVLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTL  162 (837)
Q Consensus        83 ~~~g~d~~~~~~~~~l~~~l~~~~~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L  162 (837)
                      .++++++.+.++++..++.+.     ++|++.++||+|+||+||+|++..+++.||||+++........+.+|+.+++.+
T Consensus        33 ~~~~~~~~~~~~~~~~~~~~~-----~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l  107 (382)
T 2vx3_A           33 YNDGYDDDNYDYIVKNGEKWM-----DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELM  107 (382)
T ss_dssp             BGGGTBCTTSCBCCCTTCEET-----TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred             CcCCcCCCCCcEEeecCCEee-----eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHH
Confidence            345566666666666666654     899999999999999999999999999999999998777778888999999998


Q ss_pred             hcccCCCCCCceeEEeEEEeecceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhh--cCCeeeccCC
Q 003239          163 NKKYDREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK--DAGIIHCDLK  240 (837)
Q Consensus       163 ~~~~~~~~HpnIVkl~d~f~~~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLH--s~gIVHrDLK  240 (837)
                      .+. ....|++|+++++++...+.+||||||++++|.+++.......+++..++.++.||+.||.|||  +.||||||||
T Consensus       108 ~~~-~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlk  186 (382)
T 2vx3_A          108 NKH-DTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLK  186 (382)
T ss_dssp             HHC-SSGGGGGBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCS
T ss_pred             Hhc-ccccceeEEEeeeeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCC
Confidence            642 2233457999999999999999999999999999998876667999999999999999999999  5799999999


Q ss_pred             CCCeeeeccCCCCeEEEEecccccccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH
Q 003239          241 PENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFD  320 (837)
Q Consensus       241 PeNILl~~~~~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e  320 (837)
                      |+||||+. +..+.+||+|||+++.........++|+.|+|||++.+..++.++||||||||+|||++|++||.+.+..+
T Consensus       187 p~NIll~~-~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~  265 (382)
T 2vx3_A          187 PENILLCN-PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVD  265 (382)
T ss_dssp             GGGEEESS-TTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             cccEEEec-CCCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            99999953 24678999999999887777777899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccc---cccc
Q 003239          321 LLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYF---HHKH  397 (837)
Q Consensus       321 ~l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f---~~~~  397 (837)
                      .+..+.+.++ .|+..++........+|.....      +.+.....                   ..+...+   ....
T Consensus       266 ~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~-------------------~~~~~~~~~~~~~~  319 (382)
T 2vx3_A          266 QMNKIVEVLG-IPPAHILDQAPKARKFFEKLPD------GTWNLKKT-------------------KDGKREYKPPGTRK  319 (382)
T ss_dssp             HHHHHHHHHC-SCCHHHHTTCTTHHHHEEECTT------SCEEECCC-------------------CTTCCCSCCTTCSC
T ss_pred             HHHHHHHHhC-CCCHHHHHhhHHHHHHHHhccc------cccccccc-------------------cccccccCCcchhh
Confidence            9999999998 6777766655555555554321      00000000                   0000000   0112


Q ss_pred             hHHHHhcCCCCC-CCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          398 LEEIVTNYPYRK-NLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       398 L~~il~~~p~~~-~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      +.+++....... ..............++++|||++||++||++|||++|||+||||++.
T Consensus       320 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~  379 (382)
T 2vx3_A          320 LHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT  379 (382)
T ss_dssp             HHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred             HHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence            333322111000 00000111122345689999999999999999999999999999874


No 16 
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=1.9e-48  Score=422.78  Aligned_cols=210  Identities=26%  Similarity=0.371  Sum_probs=180.3

Q ss_pred             CCceEEEEEeccCCceeEEEeecc-----CCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDA-----EMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~-----~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      .++|.+.++||+|+||+||+|++.     .+++.||||+++.. ....+++.+|+++|++|       .|||||+++++|
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-------~HpnIV~l~g~~   84 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-------QHEHIVKFYGVC   84 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEE
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhC-------CCCCCccEEEEE
Confidence            368999999999999999999754     46889999999864 34567789999999998       689999999999


Q ss_pred             eecceEEEEEeccc-hhHHHHHHhhc-----------cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeecc
Q 003239          182 VCQRHLCICFELLD-SNLYELIKINH-----------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS  249 (837)
Q Consensus       182 ~~~~~l~LVmEy~~-gsL~d~l~~~~-----------~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~  249 (837)
                      .+++.+|||||||. |+|.+++....           ...+++.+++.|+.||+.||+|||+++||||||||+||||+  
T Consensus        85 ~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~--  162 (299)
T 4asz_A           85 VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG--  162 (299)
T ss_dssp             CSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC--
T ss_pred             eeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEEC--
Confidence            99999999999998 69999997642           24699999999999999999999999999999999999995  


Q ss_pred             CCCCeEEEEecccccccCCcc-----eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 003239          250 VKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR  323 (837)
Q Consensus       250 ~~~~~IKL~DFGlA~~~~~~~-----~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~  323 (837)
                       .++.+||+|||+|+......     ...+||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.+..+++.
T Consensus       163 -~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~  241 (299)
T 4asz_A          163 -ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE  241 (299)
T ss_dssp             -GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred             -CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence             67899999999997543321     23468999999999999999999999999999999998 899999988877766


Q ss_pred             HHHH
Q 003239          324 RMIR  327 (837)
Q Consensus       324 ~I~~  327 (837)
                      .+.+
T Consensus       242 ~i~~  245 (299)
T 4asz_A          242 CITQ  245 (299)
T ss_dssp             HHHH
T ss_pred             HHHc
Confidence            6544


No 17 
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=4.8e-48  Score=425.01  Aligned_cols=210  Identities=27%  Similarity=0.370  Sum_probs=176.8

Q ss_pred             CCceEEEEEeccCCceeEEEeecc-----CCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDA-----EMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~-----~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      .++|.+.++||+|+||+||+|+..     .+++.||||+++.. ....+++.+|+++|++|       .|||||+++++|
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l-------~HpnIV~l~g~~  112 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTML-------QHQHIVRFFGVC  112 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEE
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhC-------CCCCCCcEEEEE
Confidence            368999999999999999999753     46889999999854 44567799999999998       689999999999


Q ss_pred             eecceEEEEEeccc-hhHHHHHHhhc-------------cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeee
Q 003239          182 VCQRHLCICFELLD-SNLYELIKINH-------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLC  247 (837)
Q Consensus       182 ~~~~~l~LVmEy~~-gsL~d~l~~~~-------------~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~  247 (837)
                      .+.+.+|||||||. |+|.+++....             ...+++.++..|+.||+.||+|||+++||||||||+||||+
T Consensus       113 ~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~  192 (329)
T 4aoj_A          113 TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG  192 (329)
T ss_dssp             CSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE
T ss_pred             EECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC
Confidence            99999999999998 69999987542             23599999999999999999999999999999999999996


Q ss_pred             ccCCCCeEEEEecccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 003239          248 TSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL  321 (837)
Q Consensus       248 ~~~~~~~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~  321 (837)
                         +++.+||+|||+|+.....     ....+||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.+..+.
T Consensus       193 ---~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~  269 (329)
T 4aoj_A          193 ---QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA  269 (329)
T ss_dssp             ---TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHH
T ss_pred             ---CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHH
Confidence               6789999999999754322     234578999999999999999999999999999999999 8999998887777


Q ss_pred             HHHHHH
Q 003239          322 LRRMIR  327 (837)
Q Consensus       322 l~~I~~  327 (837)
                      +..+.+
T Consensus       270 ~~~i~~  275 (329)
T 4aoj_A          270 IDCITQ  275 (329)
T ss_dssp             HHHHHH
T ss_pred             HHHHHc
Confidence            666544


No 18 
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=3.3e-47  Score=418.10  Aligned_cols=302  Identities=32%  Similarity=0.554  Sum_probs=240.2

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC  188 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~  188 (837)
                      ++|+++++||+|+||+||+|++..+++.||||+++......+....|+.+++.+.+  ....|+||+++++++...+..|
T Consensus        35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~--~~~~h~~iv~~~~~~~~~~~~~  112 (360)
T 3llt_A           35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQN--DDINNNNIVKYHGKFMYYDHMC  112 (360)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCC--CSTTGGGBCCEEEEEEETTEEE
T ss_pred             CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcc--cCCCCCCeecccceeeECCeeE
Confidence            79999999999999999999999999999999999877777788899999999964  2346999999999999999999


Q ss_pred             EEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeecc-------------------
Q 003239          189 ICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS-------------------  249 (837)
Q Consensus       189 LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~-------------------  249 (837)
                      |||||++++|.+++.......+++..++.++.||+.||+|||++|||||||||+|||++..                   
T Consensus       113 lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~  192 (360)
T 3llt_A          113 LIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ  192 (360)
T ss_dssp             EEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEE
T ss_pred             EEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccccc
Confidence            9999998899999988766679999999999999999999999999999999999999631                   


Q ss_pred             ---CCCCeEEEEecccccccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 003239          250 ---VKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI  326 (837)
Q Consensus       250 ---~~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~  326 (837)
                         ...+.+||+|||++..........++|+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+.+..+.
T Consensus       193 ~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~  272 (360)
T 3llt_A          193 IYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMME  272 (360)
T ss_dssp             EEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             ccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence               13678999999999877766677789999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCCchHHHHhhhcch--hhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhc
Q 003239          327 RILGAQPPDYVLKEAKNTS--KFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTN  404 (837)
Q Consensus       327 ~~lG~~Pp~~~l~~~k~~~--~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~  404 (837)
                      ...+ .+|..++.......  .++......                              ..++.. ......+..+...
T Consensus       273 ~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~p~~-~~~~~~~~~~~~~  320 (360)
T 3llt_A          273 SIIQ-PIPKNMLYEATKTNGSKYVNKDELK------------------------------LAWPEN-ASSINSIKHVKKC  320 (360)
T ss_dssp             HHTC-CCCHHHHHHHTTSGGGGGEETTTTE------------------------------ECTTTT-CSCHHHHHHHHTC
T ss_pred             HhcC-CCCHHHHhhhhhccCccccCcccce------------------------------ecCccc-ccchhhhhhhhhc
Confidence            9888 44444443322111  111100000                              000000 0000000111111


Q ss_pred             CCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCC
Q 003239          405 YPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVT  454 (837)
Q Consensus       405 ~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~  454 (837)
                      .|          ......++.+.+||++||++||++|||++|||+||||+
T Consensus       321 ~~----------~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          321 LP----------LYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             CC----------HHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             cc----------ccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            11          01112347889999999999999999999999999996


No 19 
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=3.3e-47  Score=420.90  Aligned_cols=312  Identities=32%  Similarity=0.564  Sum_probs=249.0

Q ss_pred             eEEeeeeeeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhccc-CCCCCCc
Q 003239           95 ILAVNLVLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKY-DREDKHH  173 (837)
Q Consensus        95 ~~~l~~~l~~~~~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~-~~~~Hpn  173 (837)
                      .+.+++.+.     ++|+++++||+|+||+||+|++..+++.||||+++......+.+.+|+.+|+.+++.. ....|+|
T Consensus        28 ~~~~g~~~~-----~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~  102 (397)
T 1wak_A           28 LVKIGDLFN-----GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREM  102 (397)
T ss_dssp             SSCTTCEET-----TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGG
T ss_pred             EEehhhhcC-----CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcce
Confidence            344455553     7999999999999999999999999999999999987777788999999999997642 2234889


Q ss_pred             eeEEeEEEe----ecceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcC-CeeeccCCCCCeeeec
Q 003239          174 IVRIYEYFV----CQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-GIIHCDLKPENILLCT  248 (837)
Q Consensus       174 IVkl~d~f~----~~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~-gIVHrDLKPeNILl~~  248 (837)
                      |++++++|.    ....+||||||++++|.+.+.......+++..++.++.||+.||+|||++ |||||||||+||||+.
T Consensus       103 iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~  182 (397)
T 1wak_A          103 VVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSV  182 (397)
T ss_dssp             BCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECC
T ss_pred             eeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEec
Confidence            999999998    55689999999999999988877656799999999999999999999998 9999999999999963


Q ss_pred             cC----------------------------------------------CCCeEEEEecccccccCCcceeeccCccccCc
Q 003239          249 SV----------------------------------------------KPAEIKIIDFGSACTEDRTVYSYIQSRYYRSP  282 (837)
Q Consensus       249 ~~----------------------------------------------~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~AP  282 (837)
                      +.                                              ....+||+|||+++.........++|+.|+||
T Consensus       183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aP  262 (397)
T 1wak_A          183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSL  262 (397)
T ss_dssp             CHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCH
T ss_pred             cchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCC
Confidence            21                                              11379999999998777666777899999999


Q ss_pred             hhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHhCCCCchHHHHhhhcchhhhhhcCCccc
Q 003239          283 EVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS------EFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHN  356 (837)
Q Consensus       283 Evl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s------~~e~l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~  356 (837)
                      |++.+..++.++||||||||+|||++|+.||...+      ..+.+..+.+.+| .+|..++...+....+|.....+..
T Consensus       263 E~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~  341 (397)
T 1wak_A          263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG-KVPRKLIVAGKYSKEFFTKKGDLKH  341 (397)
T ss_dssp             HHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHC-SCCHHHHHHCTTGGGTBCTTSSBSS
T ss_pred             hhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcC-CCChHHhhcccccccccCCcccccc
Confidence            99999999999999999999999999999998655      6778888999999 5566555555555555554432222


Q ss_pred             ccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhccc
Q 003239          357 IENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEF  436 (837)
Q Consensus       357 ~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~  436 (837)
                      +..       ...+                         ...+.+...+.           .....+..+++||.+||++
T Consensus       342 ~~~-------~~~~-------------------------~~~~~~~~~~~-----------~~~~~~~~~~~li~~~L~~  378 (397)
T 1wak_A          342 ITK-------LKPW-------------------------GLFEVLVEKYE-----------WSQEEAAGFTDFLLPMLEL  378 (397)
T ss_dssp             CCC-------CCCC-------------------------CHHHHHHHTSC-----------CCHHHHHHHHHHHGGGGCS
T ss_pred             ccc-------cCCc-------------------------chhHhhhhhcc-----------cchhhHHHHHHHHHHHhcc
Confidence            111       0000                         00111111111           1234567899999999999


Q ss_pred             CcCCCCCHHHHHcCccCCC
Q 003239          437 DPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       437 DP~kRpTa~EaL~HPff~~  455 (837)
                      ||++|||++|||+||||++
T Consensus       379 dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          379 IPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             SGGGSCCHHHHHTSGGGGC
T ss_pred             ChhhcCCHHHHhhCccccC
Confidence            9999999999999999974


No 20 
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=5.2e-47  Score=407.67  Aligned_cols=283  Identities=31%  Similarity=0.533  Sum_probs=226.7

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC------hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ------PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      ++|+++++||+|+||+||+|++..+++.||||+++..      ........+|+.+++.+...    .||||+++++++.
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~----~h~niv~~~~~~~   84 (308)
T 3g33_A            9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAF----EHPNVVRLMDVCA   84 (308)
T ss_dssp             -CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHH----CCTTBCCEEEEEE
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhc----CCCCeEEeeeeee
Confidence            7999999999999999999999999999999999732      12234667889988888654    6999999999998


Q ss_pred             ecc-----eEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEE
Q 003239          183 CQR-----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI  257 (837)
Q Consensus       183 ~~~-----~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL  257 (837)
                      ...     .+++|||++.++|.+++.......+++..++.++.||+.||+|||+++|+||||||+|||++   .++.+||
T Consensus        85 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl  161 (308)
T 3g33_A           85 TSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGTVKL  161 (308)
T ss_dssp             ECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEEC---TTSCEEE
T ss_pred             ccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEEE
Confidence            765     68999999999999999877655699999999999999999999999999999999999995   6788999


Q ss_pred             EecccccccCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCch
Q 003239          258 IDFGSACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD  335 (837)
Q Consensus       258 ~DFGlA~~~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~  335 (837)
                      +|||++.....  .....++|+.|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+.+.++..+..
T Consensus       162 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  241 (308)
T 3g33_A          162 ADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED  241 (308)
T ss_dssp             CSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTT
T ss_pred             eeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence            99999975432  3345688999999999999999999999999999999999999999999999999999998844433


Q ss_pred             HHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhh
Q 003239          336 YVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED  415 (837)
Q Consensus       336 ~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~  415 (837)
                      .+..........|                                     +.     .....+..+.             
T Consensus       242 ~~~~~~~~~~~~~-------------------------------------~~-----~~~~~~~~~~-------------  266 (308)
T 3g33_A          242 DWPRDVSLPRGAF-------------------------------------PP-----RGPRPVQSVV-------------  266 (308)
T ss_dssp             TSCSSCSSCGGGS-------------------------------------CC-----CCCCCHHHHS-------------
T ss_pred             hccchhhcccccc-------------------------------------CC-----CCCCcHHHhC-------------
Confidence            2211000000000                                     00     0001112221             


Q ss_pred             hhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       416 l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                          ..+++.+.+||.+||++||++|||++|+|+||||++..
T Consensus       267 ----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          267 ----PEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             ----CSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             ----ccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence                12457899999999999999999999999999999754


No 21 
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=7.8e-48  Score=419.64  Aligned_cols=208  Identities=22%  Similarity=0.328  Sum_probs=179.0

Q ss_pred             CceEEEEEeccCCceeEEEeec-----cCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWD-----AEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~-----~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      .+++++++||+|+||+||+|+.     ..+++.||||+++..  ....+++.+|+.+|++|       .|||||++++++
T Consensus        26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l-------~HpNIV~l~g~~   98 (308)
T 4gt4_A           26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL-------QHPNVVCLLGVV   98 (308)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHC-------CCTTBCCEEEEE
T ss_pred             HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhC-------CCCCCCCcceEE
Confidence            6789999999999999999974     346789999999743  34457899999999999       689999999999


Q ss_pred             eecceEEEEEeccc-hhHHHHHHhhc--------------cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeee
Q 003239          182 VCQRHLCICFELLD-SNLYELIKINH--------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILL  246 (837)
Q Consensus       182 ~~~~~l~LVmEy~~-gsL~d~l~~~~--------------~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl  246 (837)
                      ..++.+|||||||. |+|.+++....              ...+++.++..|+.||+.||+|||+++||||||||+||||
T Consensus        99 ~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl  178 (308)
T 4gt4_A           99 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV  178 (308)
T ss_dssp             CSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             EECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE
Confidence            99999999999998 69999996532              2358999999999999999999999999999999999999


Q ss_pred             eccCCCCeEEEEecccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 003239          247 CTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD  320 (837)
Q Consensus       247 ~~~~~~~~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e  320 (837)
                      +   +++.+||+|||+|+.....     ....+||+.|||||++.+..|+.++|||||||+||||+| |..||.+.+..+
T Consensus       179 ~---~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~  255 (308)
T 4gt4_A          179 Y---DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD  255 (308)
T ss_dssp             C---GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH
T ss_pred             C---CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH
Confidence            6   6789999999999754221     234578999999999999999999999999999999998 899999988777


Q ss_pred             HHHHHH
Q 003239          321 LLRRMI  326 (837)
Q Consensus       321 ~l~~I~  326 (837)
                      ++..+.
T Consensus       256 ~~~~i~  261 (308)
T 4gt4_A          256 VVEMIR  261 (308)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            665543


No 22 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=7e-47  Score=409.32  Aligned_cols=282  Identities=31%  Similarity=0.549  Sum_probs=226.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|+++++||+|+||+||+|++. +++.||||+++...   ...+.+.+|+++++.+       .||||+++++++...
T Consensus        20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~~   91 (311)
T 3niz_A           20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKEL-------HHPNIVSLIDVIHSE   91 (311)
T ss_dssp             SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHC-------CCTTBCCEEEEECCS
T ss_pred             HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHc-------CCCCEeeeeeEEccC
Confidence            389999999999999999999885 58999999997532   2346788999999999       589999999999999


Q ss_pred             ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          185 RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       185 ~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      +.+||||||+.++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++.
T Consensus        92 ~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~  167 (311)
T 3niz_A           92 RCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN---SDGALKLADFGLAR  167 (311)
T ss_dssp             SCEEEEEECCSEEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred             CEEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEEC---CCCCEEEccCcCce
Confidence            9999999999999999887654 4699999999999999999999999999999999999995   66889999999997


Q ss_pred             ccCC---cceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHh
Q 003239          265 TEDR---TVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE  340 (837)
Q Consensus       265 ~~~~---~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~  340 (837)
                      ....   .....++|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+....+.+..+.+.++..++..+.. 
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~-  246 (311)
T 3niz_A          168 AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ-  246 (311)
T ss_dssp             ETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGG-
T ss_pred             ecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhh-
Confidence            6542   2344578999999999987 4689999999999999999999999999999999999999998554433221 


Q ss_pred             hhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhH
Q 003239          341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES  420 (837)
Q Consensus       341 ~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~  420 (837)
                      ......+...                                      ....+....+..+...                
T Consensus       247 ~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~~~~----------------  272 (311)
T 3niz_A          247 VQELPLWKQR--------------------------------------TFQVFEKKPWSSIIPG----------------  272 (311)
T ss_dssp             GTTSHHHHSC--------------------------------------CCCCCCCCCHHHHSTT----------------
T ss_pred             hhccchhhhc--------------------------------------ccccccCCcHHHhCcc----------------
Confidence            1111110000                                      0011122223333222                


Q ss_pred             HhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       421 ~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                       .+++++|||++||++||++|||++|+|+||||++..
T Consensus       273 -~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          273 -FCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             -CCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             -cCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence             347889999999999999999999999999999753


No 23 
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=2.4e-47  Score=415.57  Aligned_cols=203  Identities=27%  Similarity=0.398  Sum_probs=171.1

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC---ChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~---~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      +++++.++||+|+||+||+|+...   .||||+++.   .....+.+.+|+++|++|       .|||||++++++. ++
T Consensus        36 ~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l-------~HpNIV~l~g~~~-~~  104 (307)
T 3omv_A           36 SEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKT-------RHVNILLFMGYMT-KD  104 (307)
T ss_dssp             TSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEEC-SS
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhC-------CCCCEeeEEEEEE-CC
Confidence            678899999999999999997643   599999974   345567889999999998       6899999999875 46


Q ss_pred             eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .+|||||||. |+|.+++.... ..+++.++..|+.||+.||+|||+++||||||||+||||+   +++.+||+|||+|+
T Consensus       105 ~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~---~~~~~Ki~DFGla~  180 (307)
T 3omv_A          105 NLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLTVKIGDFGLAT  180 (307)
T ss_dssp             SCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE---TTEEEEECCCSSCB
T ss_pred             eEEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC---CCCcEEEeeccCce
Confidence            7899999998 69999887653 4699999999999999999999999999999999999996   67899999999997


Q ss_pred             ccCC-----cceeeccCccccCchhhcCC---CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 003239          265 TEDR-----TVYSYIQSRYYRSPEVLLGY---QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI  326 (837)
Q Consensus       265 ~~~~-----~~~~~~GT~~Y~APEvl~~~---~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~  326 (837)
                      ....     .....+||+.|||||++.+.   .|+.++||||||||||||+||+.||.+.+..+.+..++
T Consensus       181 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~  250 (307)
T 3omv_A          181 VKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMV  250 (307)
T ss_dssp             C------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH
T ss_pred             ecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHH
Confidence            5432     23456899999999999743   68999999999999999999999998876655544443


No 24 
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=4.2e-46  Score=405.35  Aligned_cols=322  Identities=34%  Similarity=0.583  Sum_probs=254.0

Q ss_pred             cCCCCcceEEeeeeeeccccCCceEEEEEeccCCceeEEEeeccCCC-eEEEEEEEeCChhhHHHHHHHHHHHHHhhccc
Q 003239           88 DNVNSDLILAVNLVLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMN-SFVAVKIIKNQPAYYQQALVEVSILTTLNKKY  166 (837)
Q Consensus        88 d~~~~~~~~~l~~~l~~~~~~~~Y~i~~~LG~G~fG~Vyka~~~~tg-~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~  166 (837)
                      ++..+++.+.+++.+.     ++|++++.||+|+||+||+|++..++ +.||||+++......+.+.+|+.+++.+++. 
T Consensus         3 ~~~~~~~~~~~g~~~~-----~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~-   76 (355)
T 2eu9_A            3 DDKEGHLVCRIGDWLQ-----ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEK-   76 (355)
T ss_dssp             BCTTSCBCCCTTCEET-----TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHH-
T ss_pred             cccCCCcccccCceec-----ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhc-
Confidence            3445566677777765     89999999999999999999988776 7999999998777778888999999999764 


Q ss_pred             CCCCCCceeEEeEEEeecceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeee
Q 003239          167 DREDKHHIVRIYEYFVCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILL  246 (837)
Q Consensus       167 ~~~~HpnIVkl~d~f~~~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl  246 (837)
                      ....+.+|+.+++++...+..||||||++++|.+.+.......+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll  156 (355)
T 2eu9_A           77 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILF  156 (355)
T ss_dssp             CTTSCSCBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE
T ss_pred             CCCCceeEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence            22344569999999999999999999999999998887765679999999999999999999999999999999999999


Q ss_pred             ecc----------------CCCCeEEEEecccccccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCC
Q 003239          247 CTS----------------VKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGL  310 (837)
Q Consensus       247 ~~~----------------~~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~  310 (837)
                      ...                ...+.+||+|||++..........++|+.|+|||++.+..++.++|||||||++|||++|.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~  236 (355)
T 2eu9_A          157 VNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF  236 (355)
T ss_dssp             SCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred             ecccccccccccccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCC
Confidence            432                2568899999999987766666778999999999999999999999999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCc
Q 003239          311 PLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGK  390 (837)
Q Consensus       311 ~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~  390 (837)
                      .||...+..+.+..+.+.++ .+|..++...+....++.....                +...............+.   
T Consensus       237 ~pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~---  296 (355)
T 2eu9_A          237 TLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLV----------------WDENSSDGRYVKENCKPL---  296 (355)
T ss_dssp             CSCCCSSHHHHHHHHHHHHC-CCCHHHHHHCSCGGGEETTEEC----------------CCTTSHHHHHHHHHCCCG---
T ss_pred             CCCCCCCHHHHHHHHHHHcC-CCcHHHhhhccchhhhcccccc----------------cccccchhccccccCCcc---
Confidence            99999999999999999998 5666665554433322221110                000000000000000000   


Q ss_pred             ccccccchHHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          391 EYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       391 ~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                                       .     .........+.++.+||++||+.||++|||++|+|+||||++..
T Consensus       297 -----------------~-----~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          297 -----------------K-----SYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             -----------------G-----GGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             -----------------c-----ccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence                             0     00011123567899999999999999999999999999999754


No 25 
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=1.4e-46  Score=428.12  Aligned_cols=285  Identities=30%  Similarity=0.549  Sum_probs=212.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|+++++||+|+||+||+|++..+++.||||++.+.   ....+.+.+|+.+|+.+       .|+||+++++++...
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~l~~~~~~~  124 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-------NHDHVVKVLDIVIPK  124 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-------CCTTBCCEEEECCCS
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhC-------CCCCCCceEEEEecC
Confidence            47999999999999999999999999999999999753   34567788999999999       689999999999543


Q ss_pred             -----ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          185 -----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       185 -----~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                           ..+||||||++++|.+++...  ..+++..++.+++||+.||+|||++|||||||||+||||+   .++.+||+|
T Consensus       125 ~~~~~~~~~lv~e~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~---~~~~~kl~D  199 (458)
T 3rp9_A          125 DVEKFDELYVVLEIADSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN---QDCSVKVCD  199 (458)
T ss_dssp             CTTTCCCEEEEECCCSEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTCCEEECC
T ss_pred             CcccCceEEEEEeccccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEEC---CCCCEeecc
Confidence                 579999999999999988754  4699999999999999999999999999999999999995   678999999


Q ss_pred             cccccccCC------------------------------cceeeccCccccCchhhc-CCCCCccchHHHHHHHHHHHHh
Q 003239          260 FGSACTEDR------------------------------TVYSYIQSRYYRSPEVLL-GYQYTTAIDMWSFGCIVAELFL  308 (837)
Q Consensus       260 FGlA~~~~~------------------------------~~~~~~GT~~Y~APEvl~-~~~yt~ksDIWSLG~ILyELlt  308 (837)
                      ||+++....                              .....+||+.|+|||++. ...|+.++||||||||||||++
T Consensus       200 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt  279 (458)
T 3rp9_A          200 FGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN  279 (458)
T ss_dssp             CTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred             cccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence            999975431                              234567899999999875 5579999999999999999998


Q ss_pred             -----------CCCCCCCCC--------------------HHHHHHHHHHHhCCCCchHHHHhhhcchhhhhhcCCcccc
Q 003239          309 -----------GLPLFPGAS--------------------EFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNI  357 (837)
Q Consensus       309 -----------G~~PF~g~s--------------------~~e~l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~  357 (837)
                                 |+++|++.+                    ..+++..|.+.+| .|+...+........           
T Consensus       280 g~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g-~p~~~~~~~~~~~~~-----------  347 (458)
T 3rp9_A          280 MIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILG-TPSEEDIEALEKEDA-----------  347 (458)
T ss_dssp             TSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHC-CCCHHHHHTSSCHHH-----------
T ss_pred             hccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcC-CCCHHHHhhcCCHHH-----------
Confidence                       888888765                    3678888999999 555554433211000           


Q ss_pred             cCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccC
Q 003239          358 ENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFD  437 (837)
Q Consensus       358 ~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~D  437 (837)
                                                               ...+..++........  ......+++++|||++||++|
T Consensus       348 -----------------------------------------~~~~~~~~~~~~~~~~--~~~~~~s~~~~dLl~~mL~~d  384 (458)
T 3rp9_A          348 -----------------------------------------KRYIRIFPKREGTDLA--ERFPASSADAIHLLKRMLVFN  384 (458)
T ss_dssp             -----------------------------------------HHHHTTSCCCCCCCGG--GGSTTSCHHHHHHHHHHSCSS
T ss_pred             -----------------------------------------HHHHHhcCCCCCCCHH--HHCCCCCHHHHHHHHHHhccC
Confidence                                                     0000000100000000  011124578999999999999


Q ss_pred             cCCCCCHHHHHcCccCCCCCCC
Q 003239          438 PAKRWSPFQASRHPFVTGEPFT  459 (837)
Q Consensus       438 P~kRpTa~EaL~HPff~~~~~~  459 (837)
                      |++|||++|||+||||++..+.
T Consensus       385 P~~R~t~~e~L~Hp~f~~~~~~  406 (458)
T 3rp9_A          385 PNKRITINECLAHPFFKEVRIA  406 (458)
T ss_dssp             TTTSCCHHHHHHSGGGTTTCCG
T ss_pred             ccccCCHHHHhcCHhhhhcCCC
Confidence            9999999999999999987654


No 26 
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=5.6e-46  Score=401.21  Aligned_cols=304  Identities=35%  Similarity=0.599  Sum_probs=242.8

Q ss_pred             CceEEEEEeccCCceeEEEeec-cCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWD-AEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~-~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      ++|+++++||+|+||+||+|.+ ..+++.||||+++......+.+.+|+++++.+++. ....|++|+++++++...+.+
T Consensus        14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~~~~i~~~~~~~~~~~~~   92 (339)
T 1z57_A           14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTT-DPNSTFRCVQMLEWFEHHGHI   92 (339)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHH-CTTCTTCBCCEEEEEEETTEE
T ss_pred             CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhc-CCCCceeeEeeecccccCCcE
Confidence            7999999999999999999988 56889999999998777778899999999999764 234567899999999999999


Q ss_pred             EEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCC----------------
Q 003239          188 CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK----------------  251 (837)
Q Consensus       188 ~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~----------------  251 (837)
                      ||||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++..+.                
T Consensus        93 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~  172 (339)
T 1z57_A           93 CIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI  172 (339)
T ss_dssp             EEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEES
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccccccc
Confidence            9999999999999998776567999999999999999999999999999999999999963221                


Q ss_pred             CCeEEEEecccccccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q 003239          252 PAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA  331 (837)
Q Consensus       252 ~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~  331 (837)
                      .+.+||+|||++..........++|+.|+|||++.+..++.++|||||||++|||++|..||...+..+.+..+.+.++ 
T Consensus       173 ~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-  251 (339)
T 1z57_A          173 NPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILG-  251 (339)
T ss_dssp             CCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHC-
T ss_pred             CCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-
Confidence            5679999999998777666677899999999999999999999999999999999999999999999999999999988 


Q ss_pred             CCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhh-HHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCC
Q 003239          332 QPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALT-EIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKN  410 (837)
Q Consensus       332 ~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s-~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~  410 (837)
                      .+|..++...+....+.....                .|.... ...+.. ....+           +.           
T Consensus       252 ~~p~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~-~~~~~-----------~~-----------  292 (339)
T 1z57_A          252 PLPKHMIQKTRKRKYFHHDRL----------------DWDEHSSAGRYVS-RACKP-----------LK-----------  292 (339)
T ss_dssp             SCCHHHHHHCSCGGGEETTEE----------------CCCTTSHHHHHHH-HHCCC-----------GG-----------
T ss_pred             CCCHHHHhhccchhHHhhccc----------------cccccccccchhh-hcCcc-----------hh-----------
Confidence            555555554433221111100                000000 000000 00000           00           


Q ss_pred             CchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          411 LSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       411 l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                         +........++.+.+||++||+.||++|||++|+|+||||+..
T Consensus       293 ---~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          293 ---EFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             ---GGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             ---hhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence               0001112356789999999999999999999999999999864


No 27 
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=1.1e-46  Score=431.83  Aligned_cols=290  Identities=29%  Similarity=0.517  Sum_probs=226.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC---ChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~---~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|+++++||+|+||+||+|++..+++.||||++.+   .....+.+.+|+.+|+.+       .|+||++++++|...
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpnIv~l~~~~~~~  133 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-------NHKNIISLLNVFTPQ  133 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHC-------CCTTBCCCSEEECSC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhC-------CCCCCCcEEEEEccC
Confidence            3899999999999999999999999999999999985   345567788999999998       689999999999765


Q ss_pred             ------ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEE
Q 003239          185 ------RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII  258 (837)
Q Consensus       185 ------~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~  258 (837)
                            ..+||||||++++|.+.+..    .+++..++.+++||+.||+|||++|||||||||+|||++   .++.+||+
T Consensus       134 ~~~~~~~~~~lv~E~~~~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~---~~~~~kl~  206 (464)
T 3ttj_A          134 KTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKIL  206 (464)
T ss_dssp             CSTTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEEC
T ss_pred             CccccCCeEEEEEeCCCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe---CCCCEEEE
Confidence                  46799999999998887743    499999999999999999999999999999999999995   67899999


Q ss_pred             ecccccccCCc--ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchH
Q 003239          259 DFGSACTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY  336 (837)
Q Consensus       259 DFGlA~~~~~~--~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~  336 (837)
                      |||+++.....  ....+||+.|+|||++.+..|+.++||||||||+|||++|++||.+.+..+++.+|++.+|.++++.
T Consensus       207 DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~  286 (464)
T 3ttj_A          207 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF  286 (464)
T ss_dssp             CCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHH
T ss_pred             EEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence            99999765432  3457899999999999999999999999999999999999999999999999999999999555544


Q ss_pred             HHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhh
Q 003239          337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI  416 (837)
Q Consensus       337 ~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l  416 (837)
                      +.........++....                                       .+....+..+....-     ...+.
T Consensus       287 ~~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~-----~~~~~  322 (464)
T 3ttj_A          287 MKKLQPTVRNYVENRP---------------------------------------KYAGLTFPKLFPDSL-----FPADS  322 (464)
T ss_dssp             HTTSCHHHHHHHTTSC---------------------------------------CCCCCCHHHHSCGGG-----SCCSS
T ss_pred             HHHcchhhhhHhhccc---------------------------------------ccCCCChHHhCcccc-----ccccc
Confidence            3222111122211110                                       001111112111100     00111


Q ss_pred             hhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       417 ~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                      ......+++++|||++||++||++|||++|||+||||+.
T Consensus       323 ~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~  361 (464)
T 3ttj_A          323 EHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV  361 (464)
T ss_dssp             HHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred             ccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhh
Confidence            223345788999999999999999999999999999985


No 28 
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=2.2e-46  Score=417.22  Aligned_cols=296  Identities=29%  Similarity=0.550  Sum_probs=220.9

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC---ChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~---~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|+++++||+|+||+||+|++..+++.||||++..   .....+...+|+.+|+.+.      .|+||+++++++...+
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~------~h~niv~l~~~~~~~~   82 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS------GHENIVNLLNVLRADN   82 (388)
T ss_dssp             TTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTT------TCTTBCCEEEEEECTT
T ss_pred             CceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhcc------CCCCCCeeeeEEecCC
Confidence            799999999999999999999999999999999964   3455677889999999984      4899999999998654


Q ss_pred             --eEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          186 --HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       186 --~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                        .+|||||||+++|.+++...   .+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||++
T Consensus        83 ~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a  156 (388)
T 3oz6_A           83 DRDVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLN---AECHVKVADFGLS  156 (388)
T ss_dssp             SSCEEEEEECCSEEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTC
T ss_pred             CCEEEEEecccCcCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEc---CCCCEEecCCccc
Confidence              79999999999999988764   599999999999999999999999999999999999995   6789999999999


Q ss_pred             cccCC------------------------cceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCH
Q 003239          264 CTEDR------------------------TVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASE  318 (837)
Q Consensus       264 ~~~~~------------------------~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~  318 (837)
                      +....                        .....+||+.|+|||++.+ ..|+.++||||||||+|||++|++||.+.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~  236 (388)
T 3oz6_A          157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST  236 (388)
T ss_dssp             EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence            64321                        1234689999999999987 5799999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCchHHHHhhhcc--hhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCccccccc
Q 003239          319 FDLLRRMIRILGAQPPDYVLKEAKNT--SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHK  396 (837)
Q Consensus       319 ~e~l~~I~~~lG~~Pp~~~l~~~k~~--~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~  396 (837)
                      .+++..|+..++ .|+...+......  ..+++..                           ..............|.  
T Consensus       237 ~~~~~~i~~~~~-~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~--  286 (388)
T 3oz6_A          237 MNQLERIIGVID-FPSNEDVESIQSPFAKTMIESL---------------------------KEKVEIRQSNKRDIFT--  286 (388)
T ss_dssp             HHHHHHHHHHHC-CCCHHHHHTSCCSSHHHHHHHH---------------------------HHHCC-----CCCCHH--
T ss_pred             HHHHHHHHHhcC-CCCHHHHHhccCHHHHHHHHhC---------------------------cccccccCCCHHHhCc--
Confidence            999999999999 5554433321100  0000000                           0000000000000110  


Q ss_pred             chHHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          397 HLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       397 ~L~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      .+...+....           .....+++++|||++||++||++|||++|||+||||+...
T Consensus       287 ~~~~~~~~~~-----------~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          287 KWKNLLLKIN-----------PKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFH  336 (388)
T ss_dssp             HHHHHHHHHC-----------TTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred             chhhhccccc-----------ccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhc
Confidence            1111111111           1113467899999999999999999999999999998743


No 29 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=2.7e-46  Score=399.11  Aligned_cols=280  Identities=30%  Similarity=0.505  Sum_probs=224.2

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|+++++||+|+||+||+|++..+++.||||+++..   ....+.+.+|+.+++.+       .|+||+++++++..++
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~   74 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-------KHKNIVRLHDVLHSDK   74 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTC-------CCTTBCCEEEEEEETT
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcC-------CCCCEeeEEeEEEeCC
Confidence            6899999999999999999999999999999999743   33456778899999888       6899999999999999


Q ss_pred             eEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       186 ~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      .++|||||+++++.+.+.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++..
T Consensus        75 ~~~lv~e~~~~~l~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~---~~~~~kl~Dfg~~~~  150 (292)
T 3o0g_A           75 KLTLVFEFCDQDLKKYFDSCN-GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLARA  150 (292)
T ss_dssp             EEEEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCEE
T ss_pred             EEEEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeeccccee
Confidence            999999999999888877643 5699999999999999999999999999999999999995   678999999999975


Q ss_pred             cCC---cceeeccCccccCchhhcCCC-CCccchHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHhCCCCchHHHHh
Q 003239          266 EDR---TVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPL-FPGASEFDLLRRMIRILGAQPPDYVLKE  340 (837)
Q Consensus       266 ~~~---~~~~~~GT~~Y~APEvl~~~~-yt~ksDIWSLG~ILyELltG~~P-F~g~s~~e~l~~I~~~lG~~Pp~~~l~~  340 (837)
                      ...   .....++|+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+..+.+..+.+.++..+. ..+..
T Consensus       151 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~-~~~~~  229 (292)
T 3o0g_A          151 FGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE-EQWPS  229 (292)
T ss_dssp             CCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCT-TTCTT
T ss_pred             cCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCCh-hhhhh
Confidence            432   234457899999999998775 89999999999999999986555 7888888999999998884333 22221


Q ss_pred             hhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhH
Q 003239          341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES  420 (837)
Q Consensus       341 ~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~  420 (837)
                      ......+.                                     +..  .+-....+.                 ....
T Consensus       230 ~~~~~~~~-------------------------------------~~~--~~~~~~~~~-----------------~~~~  253 (292)
T 3o0g_A          230 MTKLPDYK-------------------------------------PYP--MYPATTSLV-----------------NVVP  253 (292)
T ss_dssp             GGGSTTCC-------------------------------------CCC--CCCTTCCCT-----------------TTST
T ss_pred             hccccccc-------------------------------------ccc--cccCCcchh-----------------hccc
Confidence            11100000                                     000  000000000                 0111


Q ss_pred             HhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       421 ~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      ..++.+.+||++||+.||++|||++|+|+||||++.
T Consensus       254 ~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          254 KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             ccChHHHHHHHHHhccChhhCCCHHHHhcCcccccC
Confidence            245788999999999999999999999999999973


No 30 
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=1.1e-45  Score=406.54  Aligned_cols=306  Identities=35%  Similarity=0.565  Sum_probs=245.0

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccC----CCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYD----REDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~----~~~HpnIVkl~d~f~~  183 (837)
                      .++|+++++||+|+||+||+|++..+++.||||+++.+....+.+.+|+.+++++.+...    ...|+||+++++++..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            379999999999999999999999999999999999877777888999999999975310    1138899999999987


Q ss_pred             cc----eEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcC-CeeeccCCCCCeeeecc---CCCCeE
Q 003239          184 QR----HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-GIIHCDLKPENILLCTS---VKPAEI  255 (837)
Q Consensus       184 ~~----~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~-gIVHrDLKPeNILl~~~---~~~~~I  255 (837)
                      .+    .+++|||+++++|.+++.......+++..++.++.||+.||+|||++ |||||||||+|||++.+   .....+
T Consensus        98 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~  177 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQI  177 (373)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEE
T ss_pred             cCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceE
Confidence            65    89999999988999999886666799999999999999999999998 99999999999999633   234589


Q ss_pred             EEEecccccccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHHHHHh
Q 003239          256 KIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS------EFDLLRRMIRIL  329 (837)
Q Consensus       256 KL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s------~~e~l~~I~~~l  329 (837)
                      ||+|||++..........++|+.|+|||++.+..++.++|||||||++|||++|+.||.+.+      ..+.+..+.+.+
T Consensus       178 kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  257 (373)
T 1q8y_A          178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELL  257 (373)
T ss_dssp             EECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHH
T ss_pred             EEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhc
Confidence            99999999877766667789999999999999999999999999999999999999998654      567788899999


Q ss_pred             CCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCC
Q 003239          330 GAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRK  409 (837)
Q Consensus       330 G~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~  409 (837)
                      | .+|..++...+....+|...+....+..                                 .....+.+++...    
T Consensus       258 ~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~----  299 (373)
T 1q8y_A          258 G-ELPSYLLRNGKYTRTFFNSRGLLRNISK---------------------------------LKFWPLEDVLTEK----  299 (373)
T ss_dssp             C-SCCHHHHHHCTTHHHHBCC--CBSSCCC---------------------------------CCBCCHHHHHHHT----
T ss_pred             C-CCCHHHHhccchhhhhcCCcchhccccc---------------------------------ccccchhhhhhhc----
Confidence            9 6667777766665555554432211111                                 0001122222110    


Q ss_pred             CCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          410 NLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       410 ~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                            .......++++.+||++||+.||++|||++|||+||||++..
T Consensus       300 ------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          300 ------YKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             ------TCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             ------ccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence                  011234678899999999999999999999999999999854


No 31 
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=2.4e-46  Score=407.92  Aligned_cols=287  Identities=32%  Similarity=0.540  Sum_probs=224.0

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      ..++|+++++||+|+||+||+|++..+++.||||+++...   ...+.+.+|+.+|+.+       .|+||+++++++..
T Consensus        32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~  104 (329)
T 3gbz_A           32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL-------QHRNIIELKSVIHH  104 (329)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGC-------CCTTBCCEEEEEEE
T ss_pred             chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHc-------CCCCcceEEEEEec
Confidence            3479999999999999999999999999999999997542   2344567899998888       68999999999999


Q ss_pred             cceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeecc--CCCCeEEEEecc
Q 003239          184 QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS--VKPAEIKIIDFG  261 (837)
Q Consensus       184 ~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~--~~~~~IKL~DFG  261 (837)
                      .+.+||||||++++|.+++....  .+++..++.++.||+.||+|||++|||||||||+|||++.+  +....+||+|||
T Consensus       105 ~~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg  182 (329)
T 3gbz_A          105 NHRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG  182 (329)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred             CCEEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence            99999999999999999987653  59999999999999999999999999999999999999633  245679999999


Q ss_pred             cccccC---CcceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHH
Q 003239          262 SACTED---RTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV  337 (837)
Q Consensus       262 lA~~~~---~~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~  337 (837)
                      ++....   ......++|+.|+|||++.+. .++.++|||||||++|||++|.+||.+.+..+.+..+.+.++ .|+...
T Consensus       183 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~  261 (329)
T 3gbz_A          183 LARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLG-LPDDTT  261 (329)
T ss_dssp             HHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC-CCCTTT
T ss_pred             CccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhC-CCchhh
Confidence            997543   223445789999999999875 589999999999999999999999999999999999999888 443322


Q ss_pred             HHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhh
Q 003239          338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS  417 (837)
Q Consensus       338 l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~  417 (837)
                      +........+...                                       ...+....+...+.              
T Consensus       262 ~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~--------------  288 (329)
T 3gbz_A          262 WPGVTALPDWKQS---------------------------------------FPKFRGKTLKRVLG--------------  288 (329)
T ss_dssp             STTGGGSTTCCTT---------------------------------------CCCCCCCCHHHHHG--------------
T ss_pred             hhhhhhhhhhhhh---------------------------------------hhhhccccHhhhcc--------------
Confidence            2211111100000                                       00011122222221              


Q ss_pred             hhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       418 ~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                        ...++++++||++||++||++|||++|+|+||||++..+
T Consensus       289 --~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  327 (329)
T 3gbz_A          289 --ALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF  327 (329)
T ss_dssp             --GGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred             --cccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCC
Confidence              124578999999999999999999999999999998765


No 32 
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=1.6e-45  Score=417.69  Aligned_cols=284  Identities=33%  Similarity=0.563  Sum_probs=226.3

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      ..++|+++++||+|+||+||+|++..+++.||||++++.   ....+.+.+|+.+|+.+       .|+||+++++++..
T Consensus        24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~nIv~l~~~~~~   96 (432)
T 3n9x_A           24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-------KSDYIIRLYDLIIP   96 (432)
T ss_dssp             CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHC-------CCTTBCCEEEECCC
T ss_pred             ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHc-------CCCCcceEEEEEec
Confidence            448999999999999999999999999999999999753   34567788999999999       58999999999987


Q ss_pred             c-----ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEE
Q 003239          184 Q-----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII  258 (837)
Q Consensus       184 ~-----~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~  258 (837)
                      .     +.+||||||++++|.++++..  ..+++..++.++.||+.||+|||++|||||||||+||||+   .++.+||+
T Consensus        97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~---~~~~~kL~  171 (432)
T 3n9x_A           97 DDLLKFDELYIVLEIADSDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN---QDCSVKVC  171 (432)
T ss_dssp             SCTTTCCCEEEEEECCSEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEEC
T ss_pred             CCCCcCCeEEEEEecCCcCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEEC---CCCCEEEc
Confidence            6     579999999999999998754  4699999999999999999999999999999999999995   67899999


Q ss_pred             ecccccccCC-------------------------cceeeccCccccCchhhc-CCCCCccchHHHHHHHHHHHHh----
Q 003239          259 DFGSACTEDR-------------------------TVYSYIQSRYYRSPEVLL-GYQYTTAIDMWSFGCIVAELFL----  308 (837)
Q Consensus       259 DFGlA~~~~~-------------------------~~~~~~GT~~Y~APEvl~-~~~yt~ksDIWSLG~ILyELlt----  308 (837)
                      |||+++....                         .....++|+.|+|||++. ...|+.++||||||||+|||++    
T Consensus       172 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p  251 (432)
T 3n9x_A          172 DFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS  251 (432)
T ss_dssp             CCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTT
T ss_pred             cCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccc
Confidence            9999975432                         135678999999999974 5579999999999999999997    


Q ss_pred             -------CCCCCCCCC-----------------HHHHHHHHHHHhCCCCchHHHHhhhcc--hhhhhhcCCcccccCCcc
Q 003239          309 -------GLPLFPGAS-----------------EFDLLRRMIRILGAQPPDYVLKEAKNT--SKFFKCIGSVHNIENGEV  362 (837)
Q Consensus       309 -------G~~PF~g~s-----------------~~e~l~~I~~~lG~~Pp~~~l~~~k~~--~~~f~~~~~l~~~~~~~~  362 (837)
                             |.++|.+.+                 ..+++..|.+.+| .|+...+......  ..+....           
T Consensus       252 ~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g-~p~~~~~~~~~~~~~~~~~~~~-----------  319 (432)
T 3n9x_A          252 HINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIG-TPTEDDLKNINKPEVIKYIKLF-----------  319 (432)
T ss_dssp             TCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHC-SCCHHHHHTCCCHHHHHHHHTS-----------
T ss_pred             cccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcC-CCCHHHHHhccCHHHHHHHHhC-----------
Confidence                   677776654                 4788999999999 5555544432110  0000000           


Q ss_pred             ccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCC
Q 003239          363 SIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRW  442 (837)
Q Consensus       363 ~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRp  442 (837)
                                             +     ......+.+..                 ..++++++|||++||++||++||
T Consensus       320 -----------------------~-----~~~~~~~~~~~-----------------~~~s~~~~dLl~~mL~~dP~~R~  354 (432)
T 3n9x_A          320 -----------------------P-----HRKPINLKQKY-----------------PSISDDGINLLESMLKFNPNKRI  354 (432)
T ss_dssp             -----------------------C-----CCCCCCHHHHS-----------------TTSCHHHHHHHHHHSCSSTTTSC
T ss_pred             -----------------------C-----CCCCCCHHHHC-----------------CCCCHHHHHHHHHHhcCCcccCC
Confidence                                   0     00001111111                 12457899999999999999999


Q ss_pred             CHHHHHcCccCCCCCCC
Q 003239          443 SPFQASRHPFVTGEPFT  459 (837)
Q Consensus       443 Ta~EaL~HPff~~~~~~  459 (837)
                      |++|||+||||++....
T Consensus       355 ta~e~L~Hp~f~~~~~~  371 (432)
T 3n9x_A          355 TIDQALDHPYLKDVRKK  371 (432)
T ss_dssp             CHHHHHTCGGGTTTCCT
T ss_pred             CHHHHhcChhhhhccCc
Confidence            99999999999987653


No 33 
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=1.6e-46  Score=416.60  Aligned_cols=204  Identities=27%  Similarity=0.390  Sum_probs=174.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCC-----CeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEM-----NSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~t-----g~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      .++|++.++||+|+||+||+|++..+     ++.||||+++..  ....+.+.+|+++|.++.      +|||||+++++
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~------hhpnIV~l~g~  136 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG------HHLNVVNLLGA  136 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC------CCTTBCCEEEE
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcC------CCCcEEEEEEE
Confidence            37899999999999999999986543     478999999854  344567899999999995      36899999999


Q ss_pred             Eeec-ceEEEEEeccc-hhHHHHHHhhc--------------cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCe
Q 003239          181 FVCQ-RHLCICFELLD-SNLYELIKINH--------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENI  244 (837)
Q Consensus       181 f~~~-~~l~LVmEy~~-gsL~d~l~~~~--------------~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNI  244 (837)
                      |... +.+|||||||. |+|.++++...              ...+++.++..|+.||+.||+|||+++||||||||+||
T Consensus       137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NI  216 (353)
T 4ase_A          137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI  216 (353)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccce
Confidence            8764 57999999998 69999997643              23489999999999999999999999999999999999


Q ss_pred             eeeccCCCCeEEEEecccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCH
Q 003239          245 LLCTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASE  318 (837)
Q Consensus       245 Ll~~~~~~~~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~  318 (837)
                      |++   +++.+||+|||+|+.....     ....+||+.|||||++.+..|+.++|||||||+||||+| |+.||.+.+.
T Consensus       217 Ll~---~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~  293 (353)
T 4ase_A          217 LLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  293 (353)
T ss_dssp             EEC---GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred             eeC---CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence            996   6789999999999754322     224578999999999999999999999999999999998 9999988654


Q ss_pred             HH
Q 003239          319 FD  320 (837)
Q Consensus       319 ~e  320 (837)
                      .+
T Consensus       294 ~~  295 (353)
T 4ase_A          294 DE  295 (353)
T ss_dssp             SH
T ss_pred             HH
Confidence            33


No 34 
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=3.5e-46  Score=404.56  Aligned_cols=287  Identities=32%  Similarity=0.586  Sum_probs=217.1

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecce
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH  186 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~  186 (837)
                      ++|+++++||+|+||+||+|++..+++.||||+++...  ...+.+.+|+.+++.+       .||||+++++++..++.
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~~~~   77 (317)
T 2pmi_A            5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL-------KHENIVRLYDVIHTENK   77 (317)
T ss_dssp             --------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTC-------CBTTBCCEEEEECCTTE
T ss_pred             cceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhc-------CCCCcceEEEEEEECCe
Confidence            78999999999999999999999999999999998532  2346778899999888       68999999999999999


Q ss_pred             EEEEEeccchhHHHHHHhhcc----CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          187 LCICFELLDSNLYELIKINHF----RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       187 l~LVmEy~~gsL~d~l~~~~~----~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      +||||||+.++|.+++.....    ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||+
T Consensus        78 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~  154 (317)
T 2pmi_A           78 LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN---KRGQLKLGDFGL  154 (317)
T ss_dssp             EEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCSS
T ss_pred             EEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc---CCCCEEECcCcc
Confidence            999999999999998876532    3589999999999999999999999999999999999995   678999999999


Q ss_pred             ccccCC---cceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHH
Q 003239          263 ACTEDR---TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL  338 (837)
Q Consensus       263 A~~~~~---~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l  338 (837)
                      +.....   .....++|+.|+|||++.+. .++.++|||||||++|||++|++||.+.+..+.+..+.+.++ .++...+
T Consensus       155 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~  233 (317)
T 2pmi_A          155 ARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMG-TPNESLW  233 (317)
T ss_dssp             CEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-SCCTTTC
T ss_pred             ceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCChhHh
Confidence            976432   23445789999999999874 689999999999999999999999999999999999999988 4444333


Q ss_pred             HhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhh
Q 003239          339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK  418 (837)
Q Consensus       339 ~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~  418 (837)
                      .......++.....                                       ......+.+.+...            .
T Consensus       234 ~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~------------~  262 (317)
T 2pmi_A          234 PSVTKLPKYNPNIQ---------------------------------------QRPPRDLRQVLQPH------------T  262 (317)
T ss_dssp             GGGGGCTTCCTTCC---------------------------------------CCCCCCSHHHHGGG------------C
T ss_pred             hhhhhhhhcccccc---------------------------------------cccchhHHHhhccc------------c
Confidence            32222111110000                                       00011122222110            0


Q ss_pred             hHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       419 ~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      ....+.++.+||++||+.||++|||++|+|+||||++..
T Consensus       263 ~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  301 (317)
T 2pmi_A          263 KEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYY  301 (317)
T ss_dssp             SSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             cccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhccc
Confidence            012457899999999999999999999999999999754


No 35 
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=4.4e-46  Score=397.15  Aligned_cols=279  Identities=32%  Similarity=0.555  Sum_probs=220.0

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|+++++||+|+||+||+|++ .+++.||||+++...   ...+.+.+|+++++.+       .||||+++++++...+
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~   73 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKEL-------KHSNIVKLYDVIHTKK   73 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGC-------CCTTBCCEEEEEECSS
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhc-------CCCCEeeeeeEEccCC
Confidence            6899999999999999999988 678999999997542   2235677899998888       6899999999999999


Q ss_pred             eEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       186 ~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      .+++||||+.++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++..
T Consensus        74 ~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~  149 (288)
T 1ob3_A           74 RLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN---REGELKIADFGLARA  149 (288)
T ss_dssp             CEEEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCTTHHHH
T ss_pred             eEEEEEEecCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEEeECccccc
Confidence            999999999999999887643 5699999999999999999999999999999999999995   678999999999975


Q ss_pred             cCC---cceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          266 EDR---TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       266 ~~~---~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ...   .....++|+.|+|||++.+. .++.++|||||||++|||++|++||.+.+..+.+..+.+.++..+...+ ...
T Consensus       150 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-~~~  228 (288)
T 1ob3_A          150 FGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNW-PNV  228 (288)
T ss_dssp             HCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS-TTG
T ss_pred             cCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhc-hhh
Confidence            432   23345789999999999765 6899999999999999999999999999999999999998883332221 111


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                      ....++-.                                       ....+....++...                 ..
T Consensus       229 ~~~~~~~~---------------------------------------~~~~~~~~~~~~~~-----------------~~  252 (288)
T 1ob3_A          229 TELPKYDP---------------------------------------NFTVYEPLPWESFL-----------------KG  252 (288)
T ss_dssp             GGSTTCCT---------------------------------------TCCCCCCCCGGGTC-----------------CS
T ss_pred             hccccccc---------------------------------------ccccccCccHHHHh-----------------hh
Confidence            10000000                                       00000001111111                 12


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      .++++.+||++||+.||++|||++|+|+||||++.
T Consensus       253 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          253 LDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             cCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence            45788999999999999999999999999999863


No 36 
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1e-45  Score=410.58  Aligned_cols=280  Identities=28%  Similarity=0.556  Sum_probs=226.6

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC---ChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~---~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|++++.||+|+||+||+|++..+++.||||++..   .....+.+.+|+++|+.+       .|+||+++++++...
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpnIv~l~~~~~~~   96 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-------RHENVIGLLDVFTPD   96 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-------CBTTBCCCSEEECSC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-------CCcCCCCceeeEecC
Confidence            4799999999999999999999999999999999964   234456788999999999       589999999999876


Q ss_pred             c------eEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEE
Q 003239          185 R------HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII  258 (837)
Q Consensus       185 ~------~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~  258 (837)
                      .      .+|+||||++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+
T Consensus        97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~  170 (367)
T 1cm8_A           97 ETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCELKIL  170 (367)
T ss_dssp             SSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEEC
T ss_pred             CccccCceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc---CCCCEEEE
Confidence            3      46999999988999888763   599999999999999999999999999999999999995   67889999


Q ss_pred             ecccccccCCcceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHH
Q 003239          259 DFGSACTEDRTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV  337 (837)
Q Consensus       259 DFGlA~~~~~~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~  337 (837)
                      |||+++.........++|+.|+|||++.+ ..++.++||||||||+|||++|++||.+.+..+++..|.+.+| .|+..+
T Consensus       171 Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g-~~~~~~  249 (367)
T 1cm8_A          171 DFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTG-TPPAEF  249 (367)
T ss_dssp             CCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC-CCCHHH
T ss_pred             eeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC-CCCHHH
Confidence            99999887766677789999999999987 6899999999999999999999999999999999999999999 565555


Q ss_pred             HHhhhcc--hhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhh
Q 003239          338 LKEAKNT--SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED  415 (837)
Q Consensus       338 l~~~k~~--~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~  415 (837)
                      +......  ..+.....                                  ...     ...+.++.             
T Consensus       250 ~~~~~~~~~~~~~~~~~----------------------------------~~~-----~~~~~~~~-------------  277 (367)
T 1cm8_A          250 VQRLQSDEAKNYMKGLP----------------------------------ELE-----KKDFASIL-------------  277 (367)
T ss_dssp             HHTCSCHHHHHHHHHSC----------------------------------CCC-----CCCGGGTC-------------
T ss_pred             HHHhhhHHHHHHHHhCC----------------------------------CCC-----CCCHHHHC-------------
Confidence            4432110  11111110                                  000     01111111             


Q ss_pred             hhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       416 l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                          ...++.++|||++||++||++|||++|||+||||++..
T Consensus       278 ----~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          278 ----TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             ----TTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             ----CCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence                12457899999999999999999999999999999754


No 37 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=3.3e-45  Score=400.94  Aligned_cols=251  Identities=25%  Similarity=0.399  Sum_probs=216.6

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|++++.||+|+||+||+|++..+++.||||++.+.   ....+.+.+|+++|+.+       .||||+++++++...+
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpnIv~l~~~~~~~~   87 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-------NHPNIVKLFEVIETEK   87 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEEECSS
T ss_pred             CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhC-------CCCCEeeEEEEEEECC
Confidence            7899999999999999999999999999999999753   34566788999999998       6899999999999999


Q ss_pred             eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .+|+||||+. ++|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++.
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~  162 (328)
T 3fe3_A           88 TLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD---ADMNIKIADFGFSN  162 (328)
T ss_dssp             EEEEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSTTCCG
T ss_pred             EEEEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEc---CCCCEEEeeccCce
Confidence            9999999997 5899988765  3699999999999999999999999999999999999995   67899999999996


Q ss_pred             ccC--CcceeeccCccccCchhhcCCCCC-ccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          265 TED--RTVYSYIQSRYYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       265 ~~~--~~~~~~~GT~~Y~APEvl~~~~yt-~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ...  ......+||+.|+|||++.+..++ .++|||||||++|+|++|+.||.+.+..+....+..... .         
T Consensus       163 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~---------  232 (328)
T 3fe3_A          163 EFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY-R---------  232 (328)
T ss_dssp             GGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-C---------
T ss_pred             ecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-C---------
Confidence            543  334566899999999999988775 799999999999999999999998877666555443100 0         


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                                     .|             ..
T Consensus       233 ---------------------------------------------------------------~p-------------~~  236 (328)
T 3fe3_A          233 ---------------------------------------------------------------IP-------------FY  236 (328)
T ss_dssp             ---------------------------------------------------------------CC-------------TT
T ss_pred             ---------------------------------------------------------------CC-------------CC
Confidence                                                                           00             01


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      .++++.+||++||+.||++|||++|+|+||||+...
T Consensus       237 ~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  272 (328)
T 3fe3_A          237 MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH  272 (328)
T ss_dssp             SCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence            346788999999999999999999999999998754


No 38 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=4.5e-46  Score=412.18  Aligned_cols=255  Identities=25%  Similarity=0.424  Sum_probs=215.5

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|+++++||+|+||+||+|+++.+++.||||++++.    ....+...+|+.+|+.+.      .||||++++++|..
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~------~hp~Iv~l~~~~~~   95 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR------NHPFLTQLFCCFQT   95 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTT------TCTTBCCEEEEEEC
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhcc------CCCceeeEEEEEEe
Confidence            37899999999999999999999999999999999853    234456778999998874      58999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+|||||||. ++|.+++...  +.+++..++.++.||+.||+|||++|||||||||+||||+   .++.+||+|||+
T Consensus        96 ~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~---~~g~ikL~DFG~  170 (353)
T 3txo_A           96 PDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGM  170 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTT
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEEC---CCCCEEEccccc
Confidence            999999999998 5888888765  3699999999999999999999999999999999999995   678999999999


Q ss_pred             ccccC---CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHH
Q 003239          263 ACTED---RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       263 A~~~~---~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      ++...   ......+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+++..|....- .       
T Consensus       171 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~-~-------  242 (353)
T 3txo_A          171 CKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV-V-------  242 (353)
T ss_dssp             CBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-C-------
T ss_pred             eeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-C-------
Confidence            97532   334456899999999999998999999999999999999999999999888777766654110 0       


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                                       +|             
T Consensus       243 -----------------------------------------------------------------~p-------------  244 (353)
T 3txo_A          243 -----------------------------------------------------------------YP-------------  244 (353)
T ss_dssp             -----------------------------------------------------------------CC-------------
T ss_pred             -----------------------------------------------------------------CC-------------
Confidence                                                                             00             


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCCCH------HHHHcCccCCCCCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRWSP------FQASRHPFVTGEPFT  459 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRpTa------~EaL~HPff~~~~~~  459 (837)
                      ..+++.+.+||++||+.||++|+++      +|+++||||++..+.
T Consensus       245 ~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~  290 (353)
T 3txo_A          245 TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWA  290 (353)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHH
T ss_pred             CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHH
Confidence            0134678999999999999999999      999999999987653


No 39 
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.1e-45  Score=401.96  Aligned_cols=283  Identities=32%  Similarity=0.507  Sum_probs=221.1

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhh--HHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecce
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY--YQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH  186 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~--~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~  186 (837)
                      ++|+++++||+|+||+||+|++..+++.||||+++.....  ...+.+|+.+|+.+       .|+||+++++++...+.
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~   74 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-------KHANIVTLHDIIHTEKS   74 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCC-------CCTTBCCEEEEEECSSC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhc-------CCCCCCeeeeEEeeCCE
Confidence            6899999999999999999999999999999999754321  11345688888877       68999999999999999


Q ss_pred             EEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          187 LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       187 l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      .||||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||++...
T Consensus        75 ~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~~~  150 (324)
T 3mtl_A           75 LTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGELKLADFGLARAK  150 (324)
T ss_dssp             EEEEEECCSEEHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC---TTCCEEECSSSEEECC
T ss_pred             EEEEecccccCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC---CCCCEEEccCcccccc
Confidence            99999999999999887653 4699999999999999999999999999999999999995   6688999999999754


Q ss_pred             CC---cceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhh
Q 003239          267 DR---TVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK  342 (837)
Q Consensus       267 ~~---~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k  342 (837)
                      ..   .....++|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+.+.++.+++.. +....
T Consensus       151 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~~  229 (324)
T 3mtl_A          151 SIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEET-WPGIL  229 (324)
T ss_dssp             ------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT-STTGG
T ss_pred             cCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHh-chhhh
Confidence            32   2334578999999999987 4789999999999999999999999999999999999999999443332 22111


Q ss_pred             cchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHh
Q 003239          343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI  422 (837)
Q Consensus       343 ~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~  422 (837)
                      ....+.. .                                ..+     .+....+.                 .....+
T Consensus       230 ~~~~~~~-~--------------------------------~~~-----~~~~~~~~-----------------~~~~~~  254 (324)
T 3mtl_A          230 SNEEFKT-Y--------------------------------NYP-----KYRAEALL-----------------SHAPRL  254 (324)
T ss_dssp             GCHHHHH-T--------------------------------CCC-----CCCCCCHH-----------------HHCTTS
T ss_pred             cchhhcc-c--------------------------------ccc-----cccchhhh-----------------hhcCCC
Confidence            1100000 0                                000     00000111                 111235


Q ss_pred             HHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       423 s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                      ++++.+||++||++||++|||++|||+||||.+...
T Consensus       255 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          255 DSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred             CHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence            578999999999999999999999999999998653


No 40 
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=3e-45  Score=406.38  Aligned_cols=290  Identities=30%  Similarity=0.528  Sum_probs=221.3

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|++++.||+|+||+||+|++..+++.||||+++..   ....+.+.+|+.+++.+       .||||+++++++...+
T Consensus        25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~~~~~   97 (371)
T 2xrw_A           25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-------NHKNIIGLLNVFTPQK   97 (371)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEECSCC
T ss_pred             hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhc-------CCCCccceEEeecccc
Confidence            7999999999999999999999999999999999753   34456788999999998       6899999999998765


Q ss_pred             ------eEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          186 ------HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       186 ------~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                            .+||||||++++|.+.+.    ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|
T Consensus        98 ~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~D  170 (371)
T 2xrw_A           98 SLEEFQDVYIVMELMDANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILD  170 (371)
T ss_dssp             STTTCCEEEEEEECCSEEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECC
T ss_pred             ccccccceEEEEEcCCCCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc---CCCCEEEEE
Confidence                  789999999999988875    2489999999999999999999999999999999999995   678999999


Q ss_pred             cccccccCCc--ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHH
Q 003239          260 FGSACTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV  337 (837)
Q Consensus       260 FGlA~~~~~~--~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~  337 (837)
                      ||++......  ....++|+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+++.++.++++.+
T Consensus       171 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  250 (371)
T 2xrw_A          171 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM  250 (371)
T ss_dssp             CCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHH
T ss_pred             eecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            9999765432  34568899999999999999999999999999999999999999999999999999998885444433


Q ss_pred             HHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhh
Q 003239          338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS  417 (837)
Q Consensus       338 l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~  417 (837)
                      .........++....                                       .+....+++++.....+     ....
T Consensus       251 ~~~~~~~~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~~-----~~~~  286 (371)
T 2xrw_A          251 KKLQPTVRTYVENRP---------------------------------------KYAGYSFEKLFPDVLFP-----ADSE  286 (371)
T ss_dssp             TTSCHHHHHHHHSSC---------------------------------------CCCCCCHHHHSCGGGSC-----CSSH
T ss_pred             HHhhhHHHHHHhhCc---------------------------------------cccccchhhhcccccCc-----cccc
Confidence            211111111111100                                       01111222222111110     1111


Q ss_pred             hhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       418 ~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      .....+.+++|||++||++||++|||++|||+||||+..
T Consensus       287 ~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          287 HNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             ccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence            223356789999999999999999999999999999863


No 41 
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=2.8e-45  Score=407.54  Aligned_cols=279  Identities=29%  Similarity=0.551  Sum_probs=212.2

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec-
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~-  184 (837)
                      ++|++++.||+|+||.||+|++..+++.||||++...   ....+.+.+|+.+|+.+       .|+||+++++++... 
T Consensus        29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpnIv~~~~~~~~~~  101 (367)
T 2fst_X           29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-------KHENVIGLLDVFTPAR  101 (367)
T ss_dssp             TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHC-------CCTTBCCCSEEECSCS
T ss_pred             CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhC-------CCCCCCcEEEEEecCC
Confidence            8999999999999999999999999999999999753   34566788999999998       689999999999764 


Q ss_pred             -----ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          185 -----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       185 -----~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                           ..+|+|||+++++|.+++..   ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|
T Consensus       102 ~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kL~D  175 (367)
T 2fst_X          102 SLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILD  175 (367)
T ss_dssp             SGGGCCCCEEEEECCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECC
T ss_pred             ccccCCeEEEEecccCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEEC---CCCCEEEee
Confidence                 56899999999999888865   3599999999999999999999999999999999999995   678999999


Q ss_pred             cccccccCCcceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHH
Q 003239          260 FGSACTEDRTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL  338 (837)
Q Consensus       260 FGlA~~~~~~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l  338 (837)
                      ||+++.........++|+.|+|||++.+ ..++.++||||||||+|||++|++||.+.+..+++..|.+.+| .|+...+
T Consensus       176 FG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g-~p~~~~~  254 (367)
T 2fst_X          176 FGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG-TPGAELL  254 (367)
T ss_dssp             ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-SCCHHHH
T ss_pred             ccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCCHHHH
Confidence            9999877666667789999999999987 5899999999999999999999999999999999999999999 5555544


Q ss_pred             Hhhhcc--hhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhh
Q 003239          339 KEAKNT--SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI  416 (837)
Q Consensus       339 ~~~k~~--~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l  416 (837)
                      ......  ..+.....                                  .     .....+..+..             
T Consensus       255 ~~~~~~~~~~~~~~~~----------------------------------~-----~~~~~~~~~~~-------------  282 (367)
T 2fst_X          255 KKISSESARNYIQSLT----------------------------------Q-----MPKMNFANVFI-------------  282 (367)
T ss_dssp             TTCCCHHHHHHHHTSC----------------------------------C-----CCCCCHHHHTT-------------
T ss_pred             HHhhhHHHHHHHhccC----------------------------------C-----CCCCCHHHHCC-------------
Confidence            332110  01111000                                  0     00111222221             


Q ss_pred             hhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       417 ~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                          ..++.++|||++||++||++|||++|||+||||++..
T Consensus       283 ----~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          283 ----GANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             ----TCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             ----CCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhcc
Confidence                2357899999999999999999999999999999754


No 42 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=3e-45  Score=403.09  Aligned_cols=253  Identities=23%  Similarity=0.400  Sum_probs=216.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|++++.||+|+||+||+|+++.+++.||||++++.    ......+.+|+.+|+.+       .||||++++++|..
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~l~~~~~~   76 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-------RHPFLTALKYAFQT   76 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-------CCTTBCCEEEEEEC
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC-------CCCcCcceEEEEEe
Confidence            37899999999999999999999999999999999853    23355678899998877       68999999999999


Q ss_pred             cceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+||||||+.+ +|.+++...  +.+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||+
T Consensus        77 ~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~vkL~DFG~  151 (337)
T 1o6l_A           77 HDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGL  151 (337)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTT
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEEC---CCCCEEEeeccc
Confidence            9999999999985 888887754  3699999999999999999999999999999999999995   678999999999


Q ss_pred             cccc---CCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHH
Q 003239          263 ACTE---DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       263 A~~~---~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      +...   .......+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+....+....-         
T Consensus       152 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~---------  222 (337)
T 1o6l_A          152 CKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI---------  222 (337)
T ss_dssp             CBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC---------
T ss_pred             hhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---------
Confidence            9753   2334567899999999999999999999999999999999999999988776665554433000         


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                                      .+|             
T Consensus       223 ----------------------------------------------------------------~~p-------------  225 (337)
T 1o6l_A          223 ----------------------------------------------------------------RFP-------------  225 (337)
T ss_dssp             ----------------------------------------------------------------CCC-------------
T ss_pred             ----------------------------------------------------------------CCC-------------
Confidence                                                                            000             


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCC-----CHHHHHcCccCCCCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPF  458 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRp-----Ta~EaL~HPff~~~~~  458 (837)
                      ..+++++.+||++||+.||++|+     +++|+++||||++..+
T Consensus       226 ~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~  269 (337)
T 1o6l_A          226 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW  269 (337)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCH
T ss_pred             CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCH
Confidence            01346789999999999999999     9999999999998765


No 43 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=1.9e-45  Score=401.13  Aligned_cols=253  Identities=24%  Similarity=0.438  Sum_probs=220.1

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|+++++||+|+||+||+|+++.+++.||||++++..    ...+.+.+|+.+++.+       .||||+++++++.+
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~Iv~~~~~~~~   77 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV-------THPFIIRMWGTFQD   77 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC-------CBTTBCCEEEEEEC
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC-------CCCCCceEeEEEEe
Confidence            378999999999999999999999999999999998532    2345677888888877       68999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+|+||||+. ++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||+
T Consensus        78 ~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL~Dfg~  152 (318)
T 1fot_A           78 AQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---KNGHIKITDFGF  152 (318)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC---TTSCEEECCCSS
T ss_pred             CCEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEc---CCCCEEEeecCc
Confidence            999999999998 5899888764  3699999999999999999999999999999999999995   678999999999


Q ss_pred             ccccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhh
Q 003239          263 ACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK  342 (837)
Q Consensus       263 A~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k  342 (837)
                      +..........+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+.+..+....-            
T Consensus       153 a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~------------  220 (318)
T 1fot_A          153 AKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL------------  220 (318)
T ss_dssp             CEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCC------------
T ss_pred             ceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC------------
Confidence            98777666778999999999999999999999999999999999999999988877666655543100            


Q ss_pred             cchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHh
Q 003239          343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI  422 (837)
Q Consensus       343 ~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~  422 (837)
                                                                                   .+|             ...
T Consensus       221 -------------------------------------------------------------~~p-------------~~~  226 (318)
T 1fot_A          221 -------------------------------------------------------------RFP-------------PFF  226 (318)
T ss_dssp             -------------------------------------------------------------CCC-------------TTS
T ss_pred             -------------------------------------------------------------CCC-------------CCC
Confidence                                                                         000             013


Q ss_pred             HHHHHHHHHHhcccCcCCCC-----CHHHHHcCccCCCCCC
Q 003239          423 RLALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPF  458 (837)
Q Consensus       423 s~~l~DLL~kmL~~DP~kRp-----Ta~EaL~HPff~~~~~  458 (837)
                      ++++.+||++||..||++|+     +++|+++||||++..+
T Consensus       227 ~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~  267 (318)
T 1fot_A          227 NEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW  267 (318)
T ss_dssp             CHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCH
T ss_pred             CHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCH
Confidence            46789999999999999999     9999999999998665


No 44 
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=8.8e-45  Score=387.22  Aligned_cols=283  Identities=30%  Similarity=0.545  Sum_probs=226.7

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|++++.||+|+||+||+|++..+++.||||+++...   ...+.+.+|+.+++.+       .|+||+++++++...+
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~   75 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-------NHPNIVKLLDVIHTEN   75 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTC-------CCTTBCCEEEEEEETT
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHc-------CCCCeeeEEEEEecCC
Confidence            68999999999999999999999999999999997542   2235677899998887       6899999999999999


Q ss_pred             eEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       186 ~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      ..|+||||+.++|.+++.......+++..++.++.||+.||+|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        76 ~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~~  152 (299)
T 2r3i_A           76 KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARA  152 (299)
T ss_dssp             EEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECSTTHHHH
T ss_pred             ceEEEEEcccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEc---CCCCEEECcchhhhh
Confidence            99999999999999999877666799999999999999999999999999999999999995   668899999999865


Q ss_pred             cCC---cceeeccCccccCchhhcCCC-CCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          266 EDR---TVYSYIQSRYYRSPEVLLGYQ-YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       266 ~~~---~~~~~~GT~~Y~APEvl~~~~-yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ...   ......+|+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+.+..+.+.++ .+++..+...
T Consensus       153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~  231 (299)
T 2r3i_A          153 FGVPVRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG-TPDEVVWPGV  231 (299)
T ss_dssp             HCCCSBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-CCCTTTSTTG
T ss_pred             ccCCccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhC-CCchhhhhHh
Confidence            432   223457899999999998765 79999999999999999999999999999999999998888 3433322211


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                      .....+...                                     .  ..+....+.....                 .
T Consensus       232 ~~~~~~~~~-------------------------------------~--~~~~~~~~~~~~~-----------------~  255 (299)
T 2r3i_A          232 TSMPDYKPS-------------------------------------F--PKWARQDFSKVVP-----------------P  255 (299)
T ss_dssp             GGSTTCCTT-------------------------------------S--CCCCCCCHHHHST-----------------T
T ss_pred             hcCcccchh-------------------------------------h--hcccchhhHhhCC-----------------C
Confidence            110000000                                     0  0000111122111                 2


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                      .++++.+||++||+.||++|||++|+|+||||++...
T Consensus       256 ~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~~  292 (299)
T 2r3i_A          256 LDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK  292 (299)
T ss_dssp             CCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             CCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCCC
Confidence            4578899999999999999999999999999997553


No 45 
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.4e-45  Score=401.60  Aligned_cols=285  Identities=31%  Similarity=0.546  Sum_probs=224.1

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh------hHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA------YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~------~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      .++|++++.||+|+||+||+|++..+++.||||+++....      ..+.+.+|+++++.+       .|+||+++++++
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~   81 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL-------SHPNIIGLLDAF   81 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHC-------CCTTBCCEEEEE
T ss_pred             hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhC-------CCCCCCeEEEEE
Confidence            4799999999999999999999999999999999974321      124577899999998       589999999999


Q ss_pred             eecceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          182 VCQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       182 ~~~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      ...+..++||||+.++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||
T Consensus        82 ~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg  157 (346)
T 1ua2_A           82 GHKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFG  157 (346)
T ss_dssp             CCTTCCEEEEECCSEEHHHHHTTCC-SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCCG
T ss_pred             eeCCceEEEEEcCCCCHHHHHHhcC-cCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEc---CCCCEEEEecc
Confidence            9999999999999999988876543 4689999999999999999999999999999999999995   67899999999


Q ss_pred             cccccCC---cceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHH
Q 003239          262 SACTEDR---TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV  337 (837)
Q Consensus       262 lA~~~~~---~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~  337 (837)
                      ++.....   .....++|+.|+|||++.+. .++.++|||||||++|||++|.+||.+.+..+.+..+.+.++..+++.+
T Consensus       158 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~  237 (346)
T 1ua2_A          158 LAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQW  237 (346)
T ss_dssp             GGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred             cceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhh
Confidence            9975432   23445789999999999765 5899999999999999999999999999999999999998884333221


Q ss_pred             HHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhh
Q 003239          338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS  417 (837)
Q Consensus       338 l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~  417 (837)
                       ........+                                        .....+....+..+..              
T Consensus       238 -~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~--------------  262 (346)
T 1ua2_A          238 -PDMCSLPDY----------------------------------------VTFKSFPGIPLHHIFS--------------  262 (346)
T ss_dssp             -SSTTSSTTC----------------------------------------CCCCCCCCCCHHHHCT--------------
T ss_pred             -hhhccCccc----------------------------------------ccccccCCCChHHhhc--------------
Confidence             111000000                                        0000011112222211              


Q ss_pred             hhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCCCCC
Q 003239          418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCP  461 (837)
Q Consensus       418 ~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~~~~  461 (837)
                         ..++++.+||++||+.||++|||++|+|+||||++.+...+
T Consensus       263 ---~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~~~~  303 (346)
T 1ua2_A          263 ---AAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTP  303 (346)
T ss_dssp             ---TCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCCCC
T ss_pred             ---cCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCCCCC
Confidence               24578999999999999999999999999999998765544


No 46 
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=9.8e-45  Score=397.44  Aligned_cols=287  Identities=25%  Similarity=0.440  Sum_probs=227.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|+++++||+|+||+||+|++..+++.||||++...   ......+.+|+.+++.+       .|+||+++++++...
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~   88 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-------KHENVVNLIEICRTK   88 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHC-------CCTTBCCEEEEEEEC
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhc-------cCCCcccHhheeecc
Confidence            37999999999999999999999999999999998643   22345677899999998       589999999999874


Q ss_pred             --------ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEE
Q 003239          185 --------RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIK  256 (837)
Q Consensus       185 --------~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IK  256 (837)
                              +.+||||||+.++|.+.+.... ..+++.+++.++.||+.||+|||++||+||||||+|||++   .++.+|
T Consensus        89 ~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~---~~~~~k  164 (351)
T 3mi9_A           89 ASPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLK  164 (351)
T ss_dssp             --------CEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEE
T ss_pred             ccccccCCceEEEEEeccCCCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCCEE
Confidence                    4689999999999998887654 4699999999999999999999999999999999999995   678999


Q ss_pred             EEecccccccC-------CcceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 003239          257 IIDFGSACTED-------RTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI  328 (837)
Q Consensus       257 L~DFGlA~~~~-------~~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~  328 (837)
                      |+|||++....       ......++|+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+..+.+.
T Consensus       165 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  244 (351)
T 3mi9_A          165 LADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL  244 (351)
T ss_dssp             ECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             EccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            99999996532       222345789999999999874 6899999999999999999999999999999999999999


Q ss_pred             hCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCC
Q 003239          329 LGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYR  408 (837)
Q Consensus       329 lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~  408 (837)
                      .+..+++. +....... .+......                                 .    .....+.+.       
T Consensus       245 ~~~~~~~~-~~~~~~~~-~~~~~~~~---------------------------------~----~~~~~~~~~-------  278 (351)
T 3mi9_A          245 CGSITPEV-WPNVDNYE-LYEKLELV---------------------------------K----GQKRKVKDR-------  278 (351)
T ss_dssp             HCCCCTTT-STTGGGCG-GGTSSCCC---------------------------------S----SCCCCHHHH-------
T ss_pred             hCCCChhh-ccccccch-hhcccccc---------------------------------c----ccccCHHHH-------
Confidence            98554433 22211111 00000000                                 0    000001111       


Q ss_pred             CCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCCC
Q 003239          409 KNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT  459 (837)
Q Consensus       409 ~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~~  459 (837)
                              ......++.+.+||++||++||++|||++|+|+||||+..+.+
T Consensus       279 --------~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~  321 (351)
T 3mi9_A          279 --------LKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMP  321 (351)
T ss_dssp             --------HHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred             --------hhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence                    1111235779999999999999999999999999999987653


No 47 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.3e-45  Score=397.99  Aligned_cols=258  Identities=25%  Similarity=0.418  Sum_probs=221.5

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++.+.||+|+||+||+|++..+++.||+|+++........+.+|+.+|+.+       .||||+++++++.+.+.+
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-------~hpnIv~~~~~~~~~~~~   76 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-------RHRNILHLHESFESMEEL   76 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHS-------CCTTBCCEEEEEEETTEE
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhC-------CCCCCCeEeEEEecCCEE
Confidence            4799999999999999999999999999999999987766677788999999988       689999999999999999


Q ss_pred             EEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      ++|||||.+ +|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+|||++.+ .++.+||+|||++...
T Consensus        77 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a~~~  154 (321)
T 1tki_A           77 VMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQL  154 (321)
T ss_dssp             EEEECCCCCCBHHHHHTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCEEC
T ss_pred             EEEEEeCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-CCCCEEEEECCCCeEC
Confidence            999999984 8988886542 469999999999999999999999999999999999999632 3689999999999764


Q ss_pred             C--CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhcc
Q 003239          267 D--RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNT  344 (837)
Q Consensus       267 ~--~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~~  344 (837)
                      .  .......+|+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..+.+..+..... .++.         
T Consensus       155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~-~~~~---------  224 (321)
T 1tki_A          155 KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY-TFDE---------  224 (321)
T ss_dssp             CTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC-CCCH---------
T ss_pred             CCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCC-CCCh---------
Confidence            3  334556899999999999998899999999999999999999999998887777666654211 0000         


Q ss_pred             hhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhHH
Q 003239          345 SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRL  424 (837)
Q Consensus       345 ~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s~  424 (837)
                                                                             +                 ....+++
T Consensus       225 -------------------------------------------------------~-----------------~~~~~s~  232 (321)
T 1tki_A          225 -------------------------------------------------------E-----------------AFKEISI  232 (321)
T ss_dssp             -------------------------------------------------------H-----------------HHTTSCH
T ss_pred             -------------------------------------------------------h-----------------hhccCCH
Confidence                                                                   0                 0012346


Q ss_pred             HHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          425 ALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       425 ~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      ++.+||++||..||++|||++|+|+||||++.
T Consensus       233 ~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          233 EAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            78999999999999999999999999999874


No 48 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=5e-45  Score=392.25  Aligned_cols=255  Identities=22%  Similarity=0.381  Sum_probs=216.1

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ..++|++.++||+|+||+||+|++..+++.||||++... ....+.+.+|+.+++.+       .||||++++++|...+
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~~~   90 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-------KNPNIVNYLDSYLVGD   90 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHC-------CCTTBCCEEEEEEETT
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcC-------CCCCCCeEeEEEEECC
Confidence            447999999999999999999999999999999999743 23356678899999998       6899999999999999


Q ss_pred             eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .+|+|||||. ++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++.
T Consensus        91 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~  164 (297)
T 3fxz_A           91 ELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCA  164 (297)
T ss_dssp             EEEEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             EEEEEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC---CCCCEEEeeCCCce
Confidence            9999999996 5888888754   499999999999999999999999999999999999995   66889999999987


Q ss_pred             ccCC---cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          265 TEDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       265 ~~~~---~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ....   .....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+.+..+.....  +.       
T Consensus       165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~--~~-------  235 (297)
T 3fxz_A          165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT--PE-------  235 (297)
T ss_dssp             ECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS--CC-------
T ss_pred             ecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CC-------
Confidence            5432   23456899999999999999999999999999999999999999988776665554433111  00       


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                                                ......
T Consensus       236 --------------------------------------------------------------------------~~~~~~  241 (297)
T 3fxz_A          236 --------------------------------------------------------------------------LQNPEK  241 (297)
T ss_dssp             --------------------------------------------------------------------------CSCGGG
T ss_pred             --------------------------------------------------------------------------CCCccc
Confidence                                                                                      000012


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      +++.+.+||.+||+.||++|||++|+|+||||+...
T Consensus       242 ~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  277 (297)
T 3fxz_A          242 LSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAK  277 (297)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccC
Confidence            446789999999999999999999999999998643


No 49 
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=1.2e-44  Score=409.23  Aligned_cols=280  Identities=31%  Similarity=0.562  Sum_probs=222.7

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec----
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ----  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~----  184 (837)
                      .+|++.++||+|+||+||+|++..+++.||||++..+..   ...+|+++|+.|       .|+|||+++++|...    
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~E~~il~~l-------~hpniv~l~~~~~~~~~~~  123 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR---FKNRELQIMRKL-------DHCNIVRLRYFFYSSGEKK  123 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT---SCCHHHHHHHTC-------CCTTBCCEEEEEEEEETTT
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHc-------CCCCccceeeEEeccCCCC
Confidence            589999999999999999999999999999999986532   234699999988       689999999998653    


Q ss_pred             --ceEEEEEeccchhHHHHHHhh--ccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEec
Q 003239          185 --RHLCICFELLDSNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF  260 (837)
Q Consensus       185 --~~l~LVmEy~~gsL~d~l~~~--~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DF  260 (837)
                        .++++||||+.++|.+++...  ....+++..++.++.||+.||+|||++|||||||||+||||+  .+.+.+||+||
T Consensus       124 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~--~~~~~~kl~DF  201 (420)
T 1j1b_A          124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDF  201 (420)
T ss_dssp             TEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEE--TTTTEEEECCC
T ss_pred             cceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEe--CCCCeEEeccc
Confidence              357899999999888776642  235699999999999999999999999999999999999996  34567999999


Q ss_pred             ccccccC--CcceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHH
Q 003239          261 GSACTED--RTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV  337 (837)
Q Consensus       261 GlA~~~~--~~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~  337 (837)
                      |+++...  ......++|+.|+|||++.+. .|+.++||||||||+|||++|++||.+.+..+++.++++.+| .|....
T Consensus       202 G~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg-~p~~~~  280 (420)
T 1j1b_A          202 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG-TPTREQ  280 (420)
T ss_dssp             TTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC-SCCHHH
T ss_pred             hhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCCHHH
Confidence            9997543  334456889999999999875 799999999999999999999999999999999999999999 454443


Q ss_pred             HHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhh
Q 003239          338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS  417 (837)
Q Consensus       338 l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~  417 (837)
                      +......   +....           .                     +     ......+..++   +           
T Consensus       281 ~~~~~~~---~~~~~-----------~---------------------p-----~~~~~~~~~~~---~-----------  306 (420)
T 1j1b_A          281 IREMNPN---YTEFK-----------F---------------------P-----QIKAHPWTKVF---R-----------  306 (420)
T ss_dssp             HHHHCSC---CCCCC-----------C---------------------C-----CCCCCCHHHHS---C-----------
T ss_pred             HHhhChh---hhhhc-----------c---------------------C-----ccCCCCHHHhc---C-----------
Confidence            3321100   00000           0                     0     00011122111   0           


Q ss_pred             hhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       418 ~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                        ...+++++|||++||++||++|||++|+|+||||++..
T Consensus       307 --~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~  344 (420)
T 1j1b_A          307 --PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR  344 (420)
T ss_dssp             --TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             --CCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence              12457899999999999999999999999999998754


No 50 
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=7.4e-45  Score=404.63  Aligned_cols=280  Identities=31%  Similarity=0.636  Sum_probs=223.5

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee----
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC----  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~----  183 (837)
                      .++|+++++||+|+||+||+|++..+++.||||++..+...   ..+|+++|+.+       .|+||++++++|..    
T Consensus         6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~---~~~E~~il~~l-------~hpnIv~l~~~~~~~~~~   75 (383)
T 3eb0_A            6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVL-------DHVNIIKLVDYFYTTGDE   75 (383)
T ss_dssp             CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS---CCHHHHHHTTC-------CCTTBCCEEEEEEEC---
T ss_pred             cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch---HHHHHHHHHHc-------CCCCccchhheeeecCcc
Confidence            47999999999999999999999999999999999865432   23699999888       68999999999954    


Q ss_pred             ----------------------------------cceEEEEEeccchhHHHHHHh--hccCCCCHHHHHHHHHhHHHHHh
Q 003239          184 ----------------------------------QRHLCICFELLDSNLYELIKI--NHFRGLSLSIVQLFSKQILRGLS  227 (837)
Q Consensus       184 ----------------------------------~~~l~LVmEy~~gsL~d~l~~--~~~~~L~e~~i~~I~~QIl~aL~  227 (837)
                                                        ..+++|||||+.++|.+.+..  .....+++..++.++.||+.||+
T Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~  155 (383)
T 3eb0_A           76 EPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG  155 (383)
T ss_dssp             ----------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence                                              335899999999998887764  23356999999999999999999


Q ss_pred             hhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc--CCcceeeccCccccCchhhcCC-CCCccchHHHHHHHHH
Q 003239          228 LLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE--DRTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVA  304 (837)
Q Consensus       228 yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~--~~~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILy  304 (837)
                      |||++||+||||||+|||++  ..++.+||+|||++...  .......++|+.|+|||++.+. .++.++|||||||++|
T Consensus       156 ~LH~~gi~H~Dikp~Nil~~--~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  233 (383)
T 3eb0_A          156 FIHSLGICHRDIKPQNLLVN--SKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG  233 (383)
T ss_dssp             HHHTTTEECSCCCGGGEEEE--TTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             HHHHCcCccCccCHHHEEEc--CCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence            99999999999999999996  35679999999999754  3334556889999999999875 5999999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhc
Q 003239          305 ELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELK  384 (837)
Q Consensus       305 ELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~  384 (837)
                      ||++|++||.+.+..+++..+++.+|.++.+.+.......    ....                                
T Consensus       234 ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~----~~~~--------------------------------  277 (383)
T 3eb0_A          234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHY----TEVR--------------------------------  277 (383)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC------CC--------------------------------
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCccc----cccc--------------------------------
Confidence            9999999999999999999999999944444433221110    0000                                


Q ss_pred             CCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          385 KPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       385 ~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      .+     ......+..++   |             ...++++.+||.+||++||++|||++|+|+||||++.
T Consensus       278 ~~-----~~~~~~~~~~~---~-------------~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          278 FP-----TLKAKDWRKIL---P-------------EGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             CC-----CCCCCCHHHHS---C-------------TTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred             CC-----ccCcccHHhhC---C-------------CCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence            00     00111122221   1             1245779999999999999999999999999999863


No 51 
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=5.6e-45  Score=402.80  Aligned_cols=252  Identities=23%  Similarity=0.404  Sum_probs=220.0

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ++|++++.||+|+||+||+|++..+++.||||++++..    ...+.+.+|+.+|+.+       .||||+++++++.+.
T Consensus        41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~~  113 (350)
T 1rdq_E           41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-------NFPFLVKLEFSFKDN  113 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC-------CCTTBCCEEEEEECS
T ss_pred             HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC-------CCCCCCeEEEEEEcC
Confidence            78999999999999999999999999999999997532    2345677888888877       689999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +.+||||||+. ++|.+++...  +.+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||++
T Consensus       114 ~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL~DFg~a  188 (350)
T 1rdq_E          114 SNLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFA  188 (350)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             CEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEEC---CCCCEEEcccccc
Confidence            99999999997 6899888765  3599999999999999999999999999999999999995   6789999999999


Q ss_pred             cccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhc
Q 003239          264 CTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN  343 (837)
Q Consensus       264 ~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~  343 (837)
                      +.........+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+.+..|....-             
T Consensus       189 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-------------  255 (350)
T 1rdq_E          189 KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV-------------  255 (350)
T ss_dssp             EECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-------------
T ss_pred             eeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCC-------------
Confidence            8777666778999999999999999999999999999999999999999998877666665543100             


Q ss_pred             chhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhH
Q 003239          344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR  423 (837)
Q Consensus       344 ~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s  423 (837)
                                                                                  .+|             ..++
T Consensus       256 ------------------------------------------------------------~~p-------------~~~~  262 (350)
T 1rdq_E          256 ------------------------------------------------------------RFP-------------SHFS  262 (350)
T ss_dssp             ------------------------------------------------------------CCC-------------TTCC
T ss_pred             ------------------------------------------------------------CCC-------------CCCC
Confidence                                                                        000             0134


Q ss_pred             HHHHHHHHHhcccCcCCCCC-----HHHHHcCccCCCCCC
Q 003239          424 LALVDFLKGLVEFDPAKRWS-----PFQASRHPFVTGEPF  458 (837)
Q Consensus       424 ~~l~DLL~kmL~~DP~kRpT-----a~EaL~HPff~~~~~  458 (837)
                      +.+.+||++||+.||++|++     ++|+++||||++..+
T Consensus       263 ~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w  302 (350)
T 1rdq_E          263 SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDW  302 (350)
T ss_dssp             HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCH
T ss_pred             HHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCH
Confidence            67899999999999999998     999999999998665


No 52 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=7.7e-45  Score=403.68  Aligned_cols=260  Identities=28%  Similarity=0.392  Sum_probs=218.2

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh-------hHHHHHHHHHHHHHhhcccCCCCCCceeEEeE
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA-------YYQQALVEVSILTTLNKKYDREDKHHIVRIYE  179 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~-------~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d  179 (837)
                      ..++|++.+.||+|+||+||+|+++.+++.||||++++...       ..+.+.+|+.+|+.+       .||||+++++
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l-------~hpnIv~l~~   82 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQV-------LHPNIITLHD   82 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTC-------CCTTBCCEEE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhC-------CCcCCCcEEE
Confidence            34789999999999999999999999999999999985421       346788999999888       6899999999


Q ss_pred             EEeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCC-CCeEEE
Q 003239          180 YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK-PAEIKI  257 (837)
Q Consensus       180 ~f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~-~~~IKL  257 (837)
                      +|...+.+||||||+. ++|.+++...  ..+++..++.++.||+.||.|||++|||||||||+|||++.+.. ...+||
T Consensus        83 ~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl  160 (361)
T 2yab_A           83 VYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKL  160 (361)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEE
T ss_pred             EEEeCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEE
Confidence            9999999999999996 6899888653  46999999999999999999999999999999999999963211 227999


Q ss_pred             EecccccccCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCch
Q 003239          258 IDFGSACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD  335 (837)
Q Consensus       258 ~DFGlA~~~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~  335 (837)
                      +|||++.....  .....+||+.|+|||++.+..++.++||||||||+|+|++|.+||.+.+..+.+..|.......++ 
T Consensus       161 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~-  239 (361)
T 2yab_A          161 IDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE-  239 (361)
T ss_dssp             CCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCH-
T ss_pred             EecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCc-
Confidence            99999976543  334568999999999999999999999999999999999999999998877776665432110000 


Q ss_pred             HHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhh
Q 003239          336 YVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED  415 (837)
Q Consensus       336 ~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~  415 (837)
                                                                                      +               
T Consensus       240 ----------------------------------------------------------------~---------------  240 (361)
T 2yab_A          240 ----------------------------------------------------------------E---------------  240 (361)
T ss_dssp             ----------------------------------------------------------------H---------------
T ss_pred             ----------------------------------------------------------------h---------------
Confidence                                                                            0               


Q ss_pred             hhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       416 l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                        .....++.+.+||++||..||++|||++|+|+||||+...
T Consensus       241 --~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          241 --FFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             --HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred             --hccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence              0012346789999999999999999999999999998643


No 53 
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=2.8e-44  Score=402.70  Aligned_cols=281  Identities=30%  Similarity=0.570  Sum_probs=221.3

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc--
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR--  185 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~--  185 (837)
                      ..+|++.++||+|+||+||+|++..+++ ||+|++..+...   ..+|+++|+.+       .|+||++++++|...+  
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~---~~~E~~il~~l-------~h~niv~l~~~~~~~~~~  107 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF---KNRELQIMRIV-------KHPNVVDLKAFFYSNGDK  107 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS---CCHHHHHHHTC-------CCTTBCCEEEEEEEESSS
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch---HHHHHHHHHhC-------CCCCcceEEEEEEecCCC
Confidence            3689999999999999999999887776 788877654322   23699999988       6899999999996543  


Q ss_pred             ----eEEEEEeccchhHHHHHHhh--ccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          186 ----HLCICFELLDSNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       186 ----~l~LVmEy~~gsL~d~l~~~--~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                          .+|+||||+.+++.+.+...  ....+++..++.++.||+.||+|||++||+||||||+|||++  ..++.+||+|
T Consensus       108 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~--~~~~~~kL~D  185 (394)
T 4e7w_A          108 KDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD--PPSGVLKLID  185 (394)
T ss_dssp             SSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--TTTTEEEECC
T ss_pred             CCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEc--CCCCcEEEee
Confidence                48999999998877666532  235699999999999999999999999999999999999995  3578999999


Q ss_pred             ccccccc--CCcceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchH
Q 003239          260 FGSACTE--DRTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY  336 (837)
Q Consensus       260 FGlA~~~--~~~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~  336 (837)
                      ||+++..  .......++|+.|+|||++.+. .++.++||||||||+|||++|++||.+.+..+.+..+++.+| .|+..
T Consensus       186 FG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g-~p~~~  264 (394)
T 4e7w_A          186 FGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLG-TPSRE  264 (394)
T ss_dssp             CTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC-CCCHH
T ss_pred             CCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCCHH
Confidence            9999754  3334456889999999999875 599999999999999999999999999999999999999999 45444


Q ss_pred             HHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhh
Q 003239          337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI  416 (837)
Q Consensus       337 ~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l  416 (837)
                      .+.....  .+.. .. .                               +     ......+...+              
T Consensus       265 ~~~~~~~--~~~~-~~-~-------------------------------~-----~~~~~~~~~~~--------------  290 (394)
T 4e7w_A          265 QIKTMNP--NYME-HK-F-------------------------------P-----QIRPHPFSKVF--------------  290 (394)
T ss_dssp             HHHHHCG--GGSS-SC-C-------------------------------C-----CCCCCCHHHHS--------------
T ss_pred             HHHhhCh--hhhh-hc-c-------------------------------c-----cccCCcHHHhc--------------
Confidence            3332110  0000 00 0                               0     00011111111              


Q ss_pred             hhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       417 ~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                        ....++++++||.+||++||++|||+.|+|+||||++...
T Consensus       291 --~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~  330 (394)
T 4e7w_A          291 --RPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT  330 (394)
T ss_dssp             --CTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred             --cccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence              1124578999999999999999999999999999998654


No 54 
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=2.5e-44  Score=394.21  Aligned_cols=287  Identities=28%  Similarity=0.490  Sum_probs=218.2

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc---
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR---  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~---  185 (837)
                      ++|++.++||+|+||+||+|++..+++.||||++..+........+|++.+..+       .|+||++++++|...+   
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l-------~h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVL-------HHPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             TTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHH-------CCTTBCCEEEEEEEECSSC
T ss_pred             cceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhc-------CCCCcccHHHhhhcccccc
Confidence            789999999999999999999999999999999987655555666677777777       6899999999997643   


Q ss_pred             ----eEEEEEeccchhHHHHHHhh--ccCCCCHHHHHHHHHhHHHHHhhhh--cCCeeeccCCCCCeeeeccCCCCeEEE
Q 003239          186 ----HLCICFELLDSNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLK--DAGIIHCDLKPENILLCTSVKPAEIKI  257 (837)
Q Consensus       186 ----~l~LVmEy~~gsL~d~l~~~--~~~~L~e~~i~~I~~QIl~aL~yLH--s~gIVHrDLKPeNILl~~~~~~~~IKL  257 (837)
                          .+++||||+.++|.+.+...  ....+++..++.++.||+.||.|||  ++|||||||||+|||++  ..++.+||
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~--~~~~~~kl  173 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVN--EADGTLKL  173 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEE--TTTTEEEE
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEe--CCCCcEEE
Confidence                38999999999887766542  3356899999999999999999999  99999999999999996  23689999


Q ss_pred             EecccccccCC--cceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCc
Q 003239          258 IDFGSACTEDR--TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP  334 (837)
Q Consensus       258 ~DFGlA~~~~~--~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp  334 (837)
                      +|||++.....  .....++|+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..+.+.++ .++
T Consensus       174 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~-~~~  252 (360)
T 3e3p_A          174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG-CPS  252 (360)
T ss_dssp             CCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHC-CCC
T ss_pred             eeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcC-CCC
Confidence            99999976543  23455789999999999765 489999999999999999999999999999999999999999 555


Q ss_pred             hHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchh
Q 003239          335 DYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSME  414 (837)
Q Consensus       335 ~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e  414 (837)
                      ..++.........+...                                        ......+..++...+        
T Consensus       253 ~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~~--------  284 (360)
T 3e3p_A          253 REVLRKLNPSHTDVDLY----------------------------------------NSKGIPWSNVFSDHS--------  284 (360)
T ss_dssp             HHHHHHHCTTCCCGGGG----------------------------------------CCCCCCHHHHTTTCC--------
T ss_pred             HHHHHhcccchhhcccc----------------------------------------ccccCCcccccchhh--------
Confidence            55544322111000000                                        000111222222111        


Q ss_pred             hhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          415 DISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       415 ~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                           ...++++.+||.+||++||++|||+.|||+||||++...
T Consensus       285 -----~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          285 -----LKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             -----CTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGC
T ss_pred             -----ccccHHHHHHHHHHhccCccccCCHHHHhcCccccccCC
Confidence                 124678999999999999999999999999999998654


No 55 
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=3.9e-45  Score=409.87  Aligned_cols=296  Identities=27%  Similarity=0.460  Sum_probs=214.5

Q ss_pred             CceEEE-EEeccCCceeEEEeecc--CCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee--
Q 003239          109 RRYIVK-DLLGHGTFGQVAKCWDA--EMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC--  183 (837)
Q Consensus       109 ~~Y~i~-~~LG~G~fG~Vyka~~~--~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~--  183 (837)
                      +.|++. ++||+|+||+||+|+++  .+++.||||+++.... ...+.+|+.+|+.|       .||||++++++|..  
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l-------~hpniv~~~~~~~~~~   91 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLREL-------KHPNVISLQKVFLSHA   91 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHC-------CCTTBCCCCEEEEETT
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhc-------CCCCeeeEeeEEecCC
Confidence            567774 57999999999999854  5789999999986432 34678899999999       58999999999965  


Q ss_pred             cceEEEEEeccchhHHHHHHhhcc-------CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeecc-CCCCeE
Q 003239          184 QRHLCICFELLDSNLYELIKINHF-------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS-VKPAEI  255 (837)
Q Consensus       184 ~~~l~LVmEy~~gsL~d~l~~~~~-------~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~-~~~~~I  255 (837)
                      ...+||||||+.++|.+++.....       ..+++..++.|+.||+.||+|||++|||||||||+||||... +..+.+
T Consensus        92 ~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~  171 (405)
T 3rgf_A           92 DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRV  171 (405)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCE
T ss_pred             CCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcE
Confidence            678999999999999988864431       249999999999999999999999999999999999999543 356899


Q ss_pred             EEEecccccccCC------cceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCH---------H
Q 003239          256 KIIDFGSACTEDR------TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASE---------F  319 (837)
Q Consensus       256 KL~DFGlA~~~~~------~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~---------~  319 (837)
                      ||+|||+++....      .....+||+.|+|||++.+. .++.++||||||||+|||++|++||.+...         .
T Consensus       172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~  251 (405)
T 3rgf_A          172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH  251 (405)
T ss_dssp             EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred             EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence            9999999975432      23446889999999999875 599999999999999999999999987654         4


Q ss_pred             HHHHHHHHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchH
Q 003239          320 DLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLE  399 (837)
Q Consensus       320 e~l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~  399 (837)
                      +++..|++.+| .|+...+........+......                                  .....+....+.
T Consensus       252 ~~l~~i~~~~g-~p~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~  296 (405)
T 3rgf_A          252 DQLDRIFNVMG-FPADKDWEDIKKMPEHSTLMKD----------------------------------FRRNTYTNCSLI  296 (405)
T ss_dssp             HHHHHHHHHHC-CCCTTTCGGGGGSTTHHHHHHH----------------------------------CCGGGGTTCCHH
T ss_pred             HHHHHHHHhhC-CCChhhcchhhcCcchhhhhhh----------------------------------ccccCCCcchhh
Confidence            78899999999 4444333322221111110000                                  000011111122


Q ss_pred             HHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCCCC
Q 003239          400 EIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTC  460 (837)
Q Consensus       400 ~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~~~  460 (837)
                      +.+....             ...++.+++||++||++||++|||++|||+||||++.+.+.
T Consensus       297 ~~~~~~~-------------~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~~~~  344 (405)
T 3rgf_A          297 KYMEKHK-------------VKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPT  344 (405)
T ss_dssp             HHHHTTT-------------CCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSSCCC
T ss_pred             hhHhhcC-------------CCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCCCCc
Confidence            2221111             11246789999999999999999999999999999877643


No 56 
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=4e-44  Score=395.68  Aligned_cols=280  Identities=33%  Similarity=0.581  Sum_probs=226.5

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec--
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ--  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~--  184 (837)
                      ++|+++++||+|+||.||+|++..+++.||||+++..  ....+.+.+|+++|+.+       .|+||+++++++...  
T Consensus        27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~~~   99 (364)
T 3qyz_A           27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRF-------RHENIIGINDIIRAPTI   99 (364)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHC-------CCTTBCCCCEEECCSST
T ss_pred             ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhc-------CCCCCccceeEEecCCc
Confidence            6999999999999999999999999999999999743  34457788999999999       589999999999765  


Q ss_pred             ---ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          185 ---RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       185 ---~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                         ...|+|||+++++|.+++...   .+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||
T Consensus       100 ~~~~~~~iv~e~~~~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg  173 (364)
T 3qyz_A          100 EQMKDVYIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFG  173 (364)
T ss_dssp             TTCCCEEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCT
T ss_pred             cccceEEEEEcccCcCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEEC---CCCCEEEEeCc
Confidence               478999999999999988754   499999999999999999999999999999999999995   67889999999


Q ss_pred             cccccCCc------ceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCc
Q 003239          262 SACTEDRT------VYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP  334 (837)
Q Consensus       262 lA~~~~~~------~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp  334 (837)
                      ++......      ....+||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..+...++ .|+
T Consensus       174 ~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~~  252 (364)
T 3qyz_A          174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILG-SPS  252 (364)
T ss_dssp             TCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHC-SCC
T ss_pred             ceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhC-CCC
Confidence            99754432      2345889999999987654 589999999999999999999999999999999999999999 454


Q ss_pred             hHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchh
Q 003239          335 DYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSME  414 (837)
Q Consensus       335 ~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e  414 (837)
                      ...+....+...                             ..+..   ..+..     ....+..+.            
T Consensus       253 ~~~~~~~~~~~~-----------------------------~~~~~---~~~~~-----~~~~~~~~~------------  283 (364)
T 3qyz_A          253 QEDLNCIINLKA-----------------------------RNYLL---SLPHK-----NKVPWNRLF------------  283 (364)
T ss_dssp             HHHHHTCCCHHH-----------------------------HHHHH---TSCCC-----CCCCHHHHC------------
T ss_pred             HHHHHHhhhhhH-----------------------------HHHHH---hcCCc-----cCCCHHHhC------------
Confidence            443332111000                             00000   00000     001111111            


Q ss_pred             hhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          415 DISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       415 ~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                           ...++++.+||++||++||++|||++|||+||||++.
T Consensus       284 -----~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          284 -----PNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             -----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             -----CCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhc
Confidence                 1245789999999999999999999999999999985


No 57 
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=1.1e-43  Score=381.48  Aligned_cols=283  Identities=33%  Similarity=0.542  Sum_probs=220.1

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|+++++||+|+||+||+|++..+++.||||++...   ....+.+.+|+.+++.+       .|+||+++++++...+
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~~   75 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQL-------KHPNLVNLLEVFRRKR   75 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHC-------CCTTBCCEEEEEEETT
T ss_pred             ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhC-------CCCCccchhheeecCC
Confidence            6899999999999999999999999999999998653   23356678899999999       5899999999999999


Q ss_pred             eEEEEEeccchh-HHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLDSN-LYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~gs-L~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      ..++||||+.++ |.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++.
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~  150 (311)
T 4agu_A           76 RLHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFAR  150 (311)
T ss_dssp             EEEEEEECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             eEEEEEEeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc---CCCCEEEeeCCCch
Confidence            999999999965 54444432  4699999999999999999999999999999999999995   67899999999997


Q ss_pred             ccCCc---ceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHh
Q 003239          265 TEDRT---VYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE  340 (837)
Q Consensus       265 ~~~~~---~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~  340 (837)
                      .....   ....++|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+..+.+.++..++......
T Consensus       151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (311)
T 4agu_A          151 LLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVF  230 (311)
T ss_dssp             ECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred             hccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccc
Confidence            64422   234578999999999986 57899999999999999999999999999999999999998885544332111


Q ss_pred             hhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhH
Q 003239          341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES  420 (837)
Q Consensus       341 ~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~  420 (837)
                       . ...++.... .                               +.+  .  ....+...                 ..
T Consensus       231 -~-~~~~~~~~~-~-------------------------------~~~--~--~~~~~~~~-----------------~~  255 (311)
T 4agu_A          231 -S-TNQYFSGVK-I-------------------------------PDP--E--DMEPLELK-----------------FP  255 (311)
T ss_dssp             -H-TCGGGTTCC-C-------------------------------CCC--S--SCCCHHHH-----------------CT
T ss_pred             -c-cccccccCc-C-------------------------------CCc--c--ccchhhhh-----------------cc
Confidence             1 111111100 0                               000  0  00001111                 11


Q ss_pred             HhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       421 ~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                      ..+..+.+||++||+.||++|||++|+|+||||++...
T Consensus       256 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  293 (311)
T 4agu_A          256 NISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE  293 (311)
T ss_dssp             TCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred             cccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence            24577999999999999999999999999999998653


No 58 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=1.5e-44  Score=398.23  Aligned_cols=258  Identities=27%  Similarity=0.408  Sum_probs=213.6

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh------hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      ++|++.+.||+|+||+||+|+++.+++.||||+++...      ...+.+.+|+.+++.+       .||||+++++++.
T Consensus        24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpnIv~~~~~~~   96 (351)
T 3c0i_A           24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML-------KHPHIVELLETYS   96 (351)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHC-------CCTTBCCEEEEEE
T ss_pred             cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhC-------CCCCCCcEEEEEE
Confidence            78999999999999999999999999999999997422      1356788999999998       6899999999999


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhc--cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          183 CQRHLCICFELLD-SNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~--~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      ..+.+|||||||. ++|.+.+....  ...+++..++.++.||+.||+|||+++||||||||+|||++.+.....+||+|
T Consensus        97 ~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~D  176 (351)
T 3c0i_A           97 SDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGG  176 (351)
T ss_dssp             ETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECC
T ss_pred             eCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEec
Confidence            9999999999998 58887776543  23489999999999999999999999999999999999997555556799999


Q ss_pred             cccccccCCc---ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchH
Q 003239          260 FGSACTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY  336 (837)
Q Consensus       260 FGlA~~~~~~---~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~  336 (837)
                      ||++......   ....+||+.|+|||++.+..++.++||||||||+|+|++|..||.+.. .+.+..+.......++  
T Consensus       177 fg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~--  253 (351)
T 3c0i_A          177 FGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNP--  253 (351)
T ss_dssp             CTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCH--
T ss_pred             CcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCc--
Confidence            9999765432   234679999999999999999999999999999999999999997743 3333333221000000  


Q ss_pred             HHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhh
Q 003239          337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI  416 (837)
Q Consensus       337 ~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l  416 (837)
                                                                                                      
T Consensus       254 --------------------------------------------------------------------------------  253 (351)
T 3c0i_A          254 --------------------------------------------------------------------------------  253 (351)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       417 ~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      .....+++++.+||++||+.||++|||++|+|+||||++.
T Consensus       254 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          254 RQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             cccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence            0011245778999999999999999999999999999874


No 59 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=2.4e-44  Score=406.65  Aligned_cols=259  Identities=21%  Similarity=0.372  Sum_probs=218.4

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh----hHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA----YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~----~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|+++++||+|+||+||+|+++.+++.||||++++...    ..+.+.+|+.+++.+       .||||++++++|.+
T Consensus        68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l-------~hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-------NSPWVVQLFYAFQD  140 (410)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHC-------CCTTBCCEEEEEEC
T ss_pred             ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhC-------CCCCCCeEEEEEEE
Confidence            3799999999999999999999999999999999975321    223467899999888       68999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+|||||||. |+|.+++...   .+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||+
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~---~~g~ikL~DFG~  214 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGT  214 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTT
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeEC---CCCCEEEeccce
Confidence            999999999996 5898888653   599999999999999999999999999999999999995   678999999999


Q ss_pred             ccccCCc----ceeeccCccccCchhhcCCC----CCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCc
Q 003239          263 ACTEDRT----VYSYIQSRYYRSPEVLLGYQ----YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP  334 (837)
Q Consensus       263 A~~~~~~----~~~~~GT~~Y~APEvl~~~~----yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp  334 (837)
                      ++.....    ....+||+.|+|||++.+..    |+.++|||||||++|||++|++||.+.+..+...+|+.....   
T Consensus       215 a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~---  291 (410)
T 3v8s_A          215 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS---  291 (410)
T ss_dssp             CEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHH---
T ss_pred             eEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhcccc---
Confidence            9765432    23568999999999998765    889999999999999999999999998887777766542110   


Q ss_pred             hHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchh
Q 003239          335 DYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSME  414 (837)
Q Consensus       335 ~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e  414 (837)
                                                                                          ..+|.       
T Consensus       292 --------------------------------------------------------------------~~~p~-------  296 (410)
T 3v8s_A          292 --------------------------------------------------------------------LTFPD-------  296 (410)
T ss_dssp             --------------------------------------------------------------------CCCCT-------
T ss_pred             --------------------------------------------------------------------ccCCC-------
Confidence                                                                                00000       


Q ss_pred             hhhhhHHhHHHHHHHHHHhcccCcCC--CCCHHHHHcCccCCCCCCCCC
Q 003239          415 DISKESQIRLALVDFLKGLVEFDPAK--RWSPFQASRHPFVTGEPFTCP  461 (837)
Q Consensus       415 ~l~~~~~~s~~l~DLL~kmL~~DP~k--RpTa~EaL~HPff~~~~~~~~  461 (837)
                          ...+++++.+||++||+.+|++  |++++||++||||++..|...
T Consensus       297 ----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w~~~  341 (410)
T 3v8s_A          297 ----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWE  341 (410)
T ss_dssp             ----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSCCST
T ss_pred             ----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCHHHH
Confidence                0113477899999999999998  999999999999999877544


No 60 
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=5.6e-44  Score=396.24  Aligned_cols=281  Identities=27%  Similarity=0.545  Sum_probs=224.3

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|++.+.||+|+||+||+|++..+++.||||+++..   ....+.+.+|+.+++.+       .|+||+++++++...
T Consensus        41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~  113 (371)
T 4exu_A           41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-------QHENVIGLLDVFTPA  113 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHC-------CCTTBCCCSEEECSC
T ss_pred             cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhc-------CCCCchhhhhheecc
Confidence            38999999999999999999999999999999999853   34457788999999998       589999999999987


Q ss_pred             ceE------EEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEE
Q 003239          185 RHL------CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII  258 (837)
Q Consensus       185 ~~l------~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~  258 (837)
                      +..      |+||||+.++|.+.+.    ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+
T Consensus       114 ~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kL~  186 (371)
T 4exu_A          114 SSLRNFYDFYLVMPFMQTDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKIL  186 (371)
T ss_dssp             SSSTTCCCCEEEEECCCEEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEEC
T ss_pred             CCcccceeEEEEEccccccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEEC---CCCCEEEE
Confidence            654      9999999999887763    3499999999999999999999999999999999999995   67889999


Q ss_pred             ecccccccCCcceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHH
Q 003239          259 DFGSACTEDRTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV  337 (837)
Q Consensus       259 DFGlA~~~~~~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~  337 (837)
                      |||+++.........++|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.+..+ .++..+
T Consensus       187 Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~  265 (371)
T 4exu_A          187 DFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG-VPGTEF  265 (371)
T ss_dssp             STTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-CCCHHH
T ss_pred             ecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCcHHH
Confidence            99999877776677789999999999987 6899999999999999999999999999999999999999998 554444


Q ss_pred             HHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhh
Q 003239          338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS  417 (837)
Q Consensus       338 l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~  417 (837)
                      ........                             ...+....   +.     .....+..+.               
T Consensus       266 ~~~~~~~~-----------------------------~~~~~~~~---~~-----~~~~~~~~~~---------------  293 (371)
T 4exu_A          266 VQKLNDKA-----------------------------AKSYIQSL---PQ-----TPRKDFTQLF---------------  293 (371)
T ss_dssp             HTTCSCHH-----------------------------HHHHHHHS---CC-----CCCCCHHHHS---------------
T ss_pred             HHHhhhhh-----------------------------hhhhhhcc---CC-----CcchhHHHhc---------------
Confidence            33211100                             00000000   00     0001111111               


Q ss_pred             hhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       418 ~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                        ...++.+.+||++||++||++|||++|+|+||||+...
T Consensus       294 --~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  331 (371)
T 4exu_A          294 --PRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  331 (371)
T ss_dssp             --TTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             --cccChHHHHHHHHHCCCChhhcCCHHHHhcCcccccCC
Confidence              12457899999999999999999999999999999754


No 61 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=7e-45  Score=402.10  Aligned_cols=251  Identities=24%  Similarity=0.438  Sum_probs=208.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      .++|++.++||+|+||+||+|++..+++.||||++.+..  ...+.+.+|+++|+.+       .||||+++++++...+
T Consensus         9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l-------~hpnIv~l~~~~~~~~   81 (347)
T 3zgw_A            9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL-------RHQHICQLYHVLETAN   81 (347)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTC-------CCTTBCCEEEEEECSS
T ss_pred             hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhC-------CCCCEeeEEEEEEeCC
Confidence            489999999999999999999999999999999997643  2345678899999988       6899999999999999


Q ss_pred             eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .+++|||||. ++|.+++....  .+++..++.++.||+.||+|||++|||||||||+|||++   ..+.+||+|||++.
T Consensus        82 ~~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~---~~~~~kL~DFG~a~  156 (347)
T 3zgw_A           82 KIFMVLEYCPGGELFDYIISQD--RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD---EYHKLKLIDFGLCA  156 (347)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             EEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEc---CCCCEEEEeccCcc
Confidence            9999999996 68999887653  699999999999999999999999999999999999995   67899999999986


Q ss_pred             ccCC----cceeeccCccccCchhhcCCCC-CccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHH
Q 003239          265 TEDR----TVYSYIQSRYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       265 ~~~~----~~~~~~GT~~Y~APEvl~~~~y-t~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      ....    .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+..+....+.+..- .       
T Consensus       157 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-~-------  228 (347)
T 3zgw_A          157 KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKY-D-------  228 (347)
T ss_dssp             C--------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-C-------
T ss_pred             cccCCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC-C-------
Confidence            5432    2345689999999999998875 8899999999999999999999998877776665544110 0       


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                                       +|             
T Consensus       229 -----------------------------------------------------------------~p-------------  230 (347)
T 3zgw_A          229 -----------------------------------------------------------------VP-------------  230 (347)
T ss_dssp             -----------------------------------------------------------------CC-------------
T ss_pred             -----------------------------------------------------------------CC-------------
Confidence                                                                             00             


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      ...++.+.+||++||+.||++|||++|+|+||||.+.
T Consensus       231 ~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~~~  267 (347)
T 3zgw_A          231 KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQD  267 (347)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHTT
T ss_pred             CCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchhcC
Confidence            0134678899999999999999999999999999874


No 62 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=9.2e-45  Score=408.37  Aligned_cols=198  Identities=22%  Similarity=0.395  Sum_probs=175.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|+++++||+|+||+||+|+++.+++.||||++++..    ...+.+.+|..+|+++.      .||||++++++|..
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~------~hp~Iv~l~~~~~~  124 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS------NHPFLVGLHSCFQT  124 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHT------TCTTBCCEEEEEEC
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcC------CCCCcCeeEEEEEE
Confidence            478999999999999999999999999999999998642    22345778999998874      58999999999999


Q ss_pred             cceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+|||||||.+ +|.+++...  +.+++..++.++.||+.||+|||++|||||||||+||||+   .++.+||+|||+
T Consensus       125 ~~~~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~---~~g~ikL~DFGl  199 (396)
T 4dc2_A          125 ESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGM  199 (396)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTT
T ss_pred             CCEEEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEC---CCCCEEEeecce
Confidence            9999999999985 888888765  3699999999999999999999999999999999999995   678999999999


Q ss_pred             cccc---CCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          263 ACTE---DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       263 A~~~---~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                      ++..   .......+||+.|+|||++.+..|+.++|||||||++|||++|++||...
T Consensus       200 a~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~  256 (396)
T 4dc2_A          200 CKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV  256 (396)
T ss_dssp             CBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred             eeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence            9752   33455678999999999999999999999999999999999999999654


No 63 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=3.3e-44  Score=408.80  Aligned_cols=262  Identities=19%  Similarity=0.315  Sum_probs=218.3

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh----hHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA----YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~----~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|+++++||+|+||+||+|+++.+++.||||++++...    ....+.+|+.++..+       .|+||++++++|.+
T Consensus        73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~-------~hp~Iv~l~~~~~~  145 (437)
T 4aw2_A           73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-------DSKWITTLHYAFQD  145 (437)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHS-------CTTTBCCEEEEEEC
T ss_pred             hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhC-------CCCCEEEEEEEEee
Confidence            3789999999999999999999999999999999985321    122377899999887       68999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+|||||||. |+|.+++.... ..+++..++.++.||+.||+|||+++||||||||+||||+   .++.+||+|||+
T Consensus       146 ~~~~~lV~Ey~~gg~L~~~l~~~~-~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~---~~g~vkL~DFGl  221 (437)
T 4aw2_A          146 DNNLYLVMDYYVGGDLLTLLSKFE-DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIRLADFGS  221 (437)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTT
T ss_pred             CCEEEEEEecCCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEc---CCCCEEEcchhh
Confidence            999999999996 68999887642 4699999999999999999999999999999999999995   678999999999


Q ss_pred             ccccCCc----ceeeccCccccCchhhc-----CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Q 003239          263 ACTEDRT----VYSYIQSRYYRSPEVLL-----GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQP  333 (837)
Q Consensus       263 A~~~~~~----~~~~~GT~~Y~APEvl~-----~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~P  333 (837)
                      ++.....    ....+||+.|+|||++.     ...|+.++|||||||++|||++|++||.+.+..+.+.+|+...... 
T Consensus       222 a~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~-  300 (437)
T 4aw2_A          222 CLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERF-  300 (437)
T ss_dssp             CEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHC-
T ss_pred             hhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccc-
Confidence            9654322    22358999999999997     4579999999999999999999999999988877777665421100 


Q ss_pred             chHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCch
Q 003239          334 PDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSM  413 (837)
Q Consensus       334 p~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~  413 (837)
                                                                                            .+|  ..   
T Consensus       301 ----------------------------------------------------------------------~~p--~~---  305 (437)
T 4aw2_A          301 ----------------------------------------------------------------------QFP--TQ---  305 (437)
T ss_dssp             ----------------------------------------------------------------------CCC--SS---
T ss_pred             ----------------------------------------------------------------------cCC--cc---
Confidence                                                                                  000  00   


Q ss_pred             hhhhhhHHhHHHHHHHHHHhcccCcCC--CCCHHHHHcCccCCCCCCCCC
Q 003239          414 EDISKESQIRLALVDFLKGLVEFDPAK--RWSPFQASRHPFVTGEPFTCP  461 (837)
Q Consensus       414 e~l~~~~~~s~~l~DLL~kmL~~DP~k--RpTa~EaL~HPff~~~~~~~~  461 (837)
                           ...++++++|||++||+.+|++  |++++|+++||||++..|...
T Consensus       306 -----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w~~l  350 (437)
T 4aw2_A          306 -----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNI  350 (437)
T ss_dssp             -----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCTTTG
T ss_pred             -----cccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCHHHH
Confidence                 0013477899999999999998  999999999999999877543


No 64 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=4.6e-45  Score=403.08  Aligned_cols=254  Identities=28%  Similarity=0.478  Sum_probs=218.0

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|++.++||+|+||+||+|+++.+++.||||++++..    ...+....|..+++.+.      .||||++++++|.+
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~------~hp~iv~l~~~~~~   89 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW------EHPFLTHMFCTFQT   89 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT------TCTTBCCEEEEEEC
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcC------CCCCCCcEEEEEEe
Confidence            379999999999999999999999999999999998542    33456778999988763      58999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+|||||||. ++|.+++...  +.+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||+
T Consensus        90 ~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~vkL~DFG~  164 (345)
T 1xjd_A           90 KENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGM  164 (345)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTT
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEEC---CCCCEEEeEChh
Confidence            999999999997 5898888764  3699999999999999999999999999999999999995   678999999999


Q ss_pred             cccc---CCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHH
Q 003239          263 ACTE---DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       263 A~~~---~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      ++..   .......+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+.+..|....-         
T Consensus       165 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~---------  235 (345)
T 1xjd_A          165 CKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNP---------  235 (345)
T ss_dssp             CBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC---------
T ss_pred             hhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCC---------
Confidence            9753   2334567899999999999999999999999999999999999999998887766655533100         


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                                      .+|             
T Consensus       236 ----------------------------------------------------------------~~p-------------  238 (345)
T 1xjd_A          236 ----------------------------------------------------------------FYP-------------  238 (345)
T ss_dssp             ----------------------------------------------------------------CCC-------------
T ss_pred             ----------------------------------------------------------------CCC-------------
Confidence                                                                            000             


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCCCHH-HHHcCccCCCCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRWSPF-QASRHPFVTGEPF  458 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRpTa~-EaL~HPff~~~~~  458 (837)
                      ..+++++.+||++||+.||++|||+. |+++||||++..+
T Consensus       239 ~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~w  278 (345)
T 1xjd_A          239 RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINW  278 (345)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCH
T ss_pred             cccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCCH
Confidence            01346789999999999999999998 9999999998765


No 65 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=2e-44  Score=392.87  Aligned_cols=260  Identities=28%  Similarity=0.407  Sum_probs=218.1

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-------hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeE
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYE  179 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d  179 (837)
                      ..++|++.+.||+|+||+||+|++..+++.||||+++...       ...+.+.+|+.+|+.+       .||||+++++
T Consensus         9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~   81 (326)
T 2y0a_A            9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI-------QHPNVITLHE   81 (326)
T ss_dssp             HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHC-------CCTTBCCEEE
T ss_pred             cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhC-------CCCCCCcEEE
Confidence            3478999999999999999999999999999999997532       1356788999999999       5899999999


Q ss_pred             EEeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccC-CCCeEEE
Q 003239          180 YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV-KPAEIKI  257 (837)
Q Consensus       180 ~f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~-~~~~IKL  257 (837)
                      ++...+.+++||||+. ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+. ....+||
T Consensus        82 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl  159 (326)
T 2y0a_A           82 VYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKI  159 (326)
T ss_dssp             EEECSSEEEEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEE
T ss_pred             EEEeCCEEEEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEE
Confidence            9999999999999997 5899888653  4699999999999999999999999999999999999996322 2237999


Q ss_pred             EecccccccC--CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCch
Q 003239          258 IDFGSACTED--RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD  335 (837)
Q Consensus       258 ~DFGlA~~~~--~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~  335 (837)
                      +|||++....  ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+..... ..+.
T Consensus       160 ~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~  238 (326)
T 2y0a_A          160 IDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY-EFED  238 (326)
T ss_dssp             CCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC-CCCH
T ss_pred             EECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC-CcCc
Confidence            9999997653  334456899999999999988999999999999999999999999998877766665543211 0000


Q ss_pred             HHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhh
Q 003239          336 YVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED  415 (837)
Q Consensus       336 ~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~  415 (837)
                                                                                      ..              
T Consensus       239 ----------------------------------------------------------------~~--------------  240 (326)
T 2y0a_A          239 ----------------------------------------------------------------EY--------------  240 (326)
T ss_dssp             ----------------------------------------------------------------HH--------------
T ss_pred             ----------------------------------------------------------------cc--------------
Confidence                                                                            00              


Q ss_pred             hhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       416 l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                         ....+..+.+||++||+.||++|||++|+|+||||+...
T Consensus       241 ---~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          241 ---FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             ---HTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             ---cccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence               011346789999999999999999999999999998754


No 66 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=2.1e-44  Score=397.14  Aligned_cols=197  Identities=22%  Similarity=0.400  Sum_probs=176.4

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|++++.||+|+||+||+|+++.+++.||||++++.    ....+.+.+|+.+++++.      .||||++++++|..
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~------~hp~iv~l~~~~~~   81 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS------NHPFLVGLHSCFQT   81 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTT------TCTTBCCEEEEEEC
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcC------CCCccCeEEEEEEe
Confidence            37899999999999999999999999999999999853    344566788999998873      58999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+|+||||+. ++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||+
T Consensus        82 ~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL~DFG~  156 (345)
T 3a8x_A           82 ESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGM  156 (345)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCGGG
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC---CCCCEEEEeccc
Confidence            999999999997 5888888764  3699999999999999999999999999999999999995   678999999999


Q ss_pred             cccc---CCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 003239          263 ACTE---DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG  315 (837)
Q Consensus       263 A~~~---~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g  315 (837)
                      ++..   .......+||+.|+|||++.+..++.++|||||||++|||++|++||..
T Consensus       157 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          157 CKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             CBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             cccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence            9753   2334567899999999999999999999999999999999999999965


No 67 
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=1.4e-44  Score=402.58  Aligned_cols=208  Identities=18%  Similarity=0.252  Sum_probs=181.8

Q ss_pred             CCceEEEEEeccC--CceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          108 QRRYIVKDLLGHG--TFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       108 ~~~Y~i~~~LG~G--~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      .++|+++++||+|  +||+||+|++..+++.||||+++..   ....+.+.+|+.+++.+       .|||||+++++|.
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~   96 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLF-------NHPNIVPYRATFI   96 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhC-------CCCCCCcEeEEEE
Confidence            3799999999999  9999999999999999999999854   34456778899999999       6899999999999


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      ..+.+|||||||. ++|.+++.......+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~---~~~~~kl~dfg  173 (389)
T 3gni_B           97 ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLR  173 (389)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCGG
T ss_pred             ECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEcccc
Confidence            9999999999998 5899998876556799999999999999999999999999999999999995   67899999999


Q ss_pred             cccccC----------CcceeeccCccccCchhhcC--CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 003239          262 SACTED----------RTVYSYIQSRYYRSPEVLLG--YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM  325 (837)
Q Consensus       262 lA~~~~----------~~~~~~~GT~~Y~APEvl~~--~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I  325 (837)
                      .+....          ......+||+.|+|||++.+  ..++.++||||||||+|||++|++||.+.+..+.+..+
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~  249 (389)
T 3gni_B          174 SNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEK  249 (389)
T ss_dssp             GCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC
T ss_pred             cceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            885321          11223478999999999988  57999999999999999999999999887665555443


No 68 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=2.7e-44  Score=410.14  Aligned_cols=258  Identities=26%  Similarity=0.412  Sum_probs=218.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|++.++||+|+||+||+|.+..+++.||+|+++...   ...+.+.+|+.+|+.+       .||||+++++++.+.
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l-------~hpnIv~l~~~~~~~   82 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL-------KHPNIVRLHDSISEE   82 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHC-------CBTTBCCEEEEEECS
T ss_pred             cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-------CCcCCCeEEEEEEEC
Confidence            378999999999999999999999999999999998543   3456688999999998       689999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +..|||||||. ++|.+.+...  ..+++..++.++.||+.||.|||++|||||||||+|||++.+...+.+||+|||++
T Consensus        83 ~~~~lv~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a  160 (444)
T 3soa_A           83 GHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA  160 (444)
T ss_dssp             SEEEEEECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred             CEEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence            99999999997 5898888765  36999999999999999999999999999999999999976556789999999999


Q ss_pred             cccCCc---ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHh
Q 003239          264 CTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE  340 (837)
Q Consensus       264 ~~~~~~---~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~  340 (837)
                      ......   ....+||+.|+|||++.+..|+.++||||||||+|+|++|.+||.+.+..+.+..+.......+.      
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~------  234 (444)
T 3soa_A          161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPS------  234 (444)
T ss_dssp             BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCT------
T ss_pred             EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCc------
Confidence            765432   23568999999999999999999999999999999999999999988877776665542110000      


Q ss_pred             hhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhH
Q 003239          341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES  420 (837)
Q Consensus       341 ~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~  420 (837)
                                                                             .                     ...
T Consensus       235 -------------------------------------------------------~---------------------~~~  238 (444)
T 3soa_A          235 -------------------------------------------------------P---------------------EWD  238 (444)
T ss_dssp             -------------------------------------------------------T---------------------TTT
T ss_pred             -------------------------------------------------------c---------------------ccc
Confidence                                                                   0                     001


Q ss_pred             HhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       421 ~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      .+++++.+||.+||+.||++|||++|+|+||||++.
T Consensus       239 ~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~  274 (444)
T 3soa_A          239 TVTPEAKDLINKMLTINPSKRITAAEALKHPWISHR  274 (444)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCC
Confidence            234678999999999999999999999999999763


No 69 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=1.9e-44  Score=399.77  Aligned_cols=256  Identities=27%  Similarity=0.417  Sum_probs=218.1

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|++.+.||+|+||.||+|++..+++.||||+++..   ....+.+.+|+.+++.|       .||||+++++++.+.+
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l-------~hpnIv~~~~~~~~~~  101 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-------QHPNIVRLHDSIQEES  101 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEEECSS
T ss_pred             cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhC-------CCCCCCeEEEEEEeCC
Confidence            7899999999999999999999999999999999854   34456788999999998       6899999999999999


Q ss_pred             eEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      ..|+|||||.+ +|.+.+...  ..+++..++.++.||+.||.|||++|||||||||+|||++.+.....+||+|||++.
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~  179 (362)
T 2bdw_A          102 FHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  179 (362)
T ss_dssp             EEEEEECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred             EEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence            99999999985 888887654  469999999999999999999999999999999999999755556789999999997


Q ss_pred             ccCCc--ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhh
Q 003239          265 TEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK  342 (837)
Q Consensus       265 ~~~~~--~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k  342 (837)
                      .....  ....+||+.|+|||++.+..++.++||||||||+|+|++|.+||.+.+..+.+..+.......+.        
T Consensus       180 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~--------  251 (362)
T 2bdw_A          180 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS--------  251 (362)
T ss_dssp             CCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT--------
T ss_pred             EecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCc--------
Confidence            65432  33568999999999999989999999999999999999999999988776666555431110000        


Q ss_pred             cchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHh
Q 003239          343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI  422 (837)
Q Consensus       343 ~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~  422 (837)
                                                                                                .....+
T Consensus       252 --------------------------------------------------------------------------~~~~~~  257 (362)
T 2bdw_A          252 --------------------------------------------------------------------------PEWDTV  257 (362)
T ss_dssp             --------------------------------------------------------------------------TGGGGS
T ss_pred             --------------------------------------------------------------------------ccccCC
Confidence                                                                                      000123


Q ss_pred             HHHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       423 s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                      ++++.+||.+||+.||++|||++|+|+||||+.
T Consensus       258 ~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          258 TPEAKSLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            467899999999999999999999999999986


No 70 
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.2e-44  Score=401.06  Aligned_cols=254  Identities=25%  Similarity=0.400  Sum_probs=216.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|+++++||+|+||+||+|+++.+++.||||++++..    ...+.+..|..+|..+.      .||+|++++++|..
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~------~hp~iv~l~~~~~~   92 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG------KPPFLTQLHSCFQT   92 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTT------CCTTBCCEEEEEEC
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcC------CCCEEeeEEEEEEc
Confidence            379999999999999999999999999999999998532    23456677888876653      68999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+||||||+. ++|.+++...  +.+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||+
T Consensus        93 ~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~vkL~DFG~  167 (353)
T 2i0e_A           93 MDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGHIKIADFGM  167 (353)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTT
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEc---CCCcEEEEeCCc
Confidence            999999999997 5898888765  3599999999999999999999999999999999999995   678999999999


Q ss_pred             cccc---CCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHH
Q 003239          263 ACTE---DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       263 A~~~---~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      +...   .......+||+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+++..|....-         
T Consensus       168 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~---------  238 (353)
T 2i0e_A          168 CKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV---------  238 (353)
T ss_dssp             CBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC---------
T ss_pred             ccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC---------
Confidence            9753   2334567899999999999999999999999999999999999999998887776666544100         


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                                      .+|             
T Consensus       239 ----------------------------------------------------------------~~p-------------  241 (353)
T 2i0e_A          239 ----------------------------------------------------------------AYP-------------  241 (353)
T ss_dssp             ----------------------------------------------------------------CCC-------------
T ss_pred             ----------------------------------------------------------------CCC-------------
Confidence                                                                            000             


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCC-----CHHHHHcCccCCCCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPF  458 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRp-----Ta~EaL~HPff~~~~~  458 (837)
                      ..+++++.+||++||+.||++|+     +++|+++||||++..+
T Consensus       242 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w  285 (353)
T 2i0e_A          242 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDW  285 (353)
T ss_dssp             TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCH
T ss_pred             CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCH
Confidence            01346789999999999999999     4799999999998665


No 71 
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=9.8e-45  Score=393.86  Aligned_cols=193  Identities=21%  Similarity=0.250  Sum_probs=158.0

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc---
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR---  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~---  185 (837)
                      ++|.+.++||+|+||+||+|++  +|+.||||+++...........|+.++..+       .|||||++++++..++   
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l-------~HpNIv~l~g~~~~~~~~~   73 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREERSWFREAEIYQTVML-------RHENILGFIAADNKDNGTW   73 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHHHHHHHHHHHTSTTC-------CCTTBCCEEEEEEEECSSS
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchhhHHHHHHHHHHhcC-------CCCCCCcEEEEEEecCCCc
Confidence            6799999999999999999976  689999999986543222233344443444       7999999999998764   


Q ss_pred             -eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcC--------CeeeccCCCCCeeeeccCCCCeE
Q 003239          186 -HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA--------GIIHCDLKPENILLCTSVKPAEI  255 (837)
Q Consensus       186 -~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~--------gIVHrDLKPeNILl~~~~~~~~I  255 (837)
                       .+|||||||+ |+|.+++...   .++++.+..++.|++.||+|||++        +||||||||+||||+   .++.+
T Consensus        74 ~~~~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~---~~~~~  147 (303)
T 3hmm_A           74 TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTC  147 (303)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEEC---TTSCE
T ss_pred             eEEEEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEEC---CCCCE
Confidence             6899999998 6999998754   499999999999999999999987        999999999999995   67899


Q ss_pred             EEEecccccccCCc-------ceeeccCccccCchhhcCC------CCCccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          256 KIIDFGSACTEDRT-------VYSYIQSRYYRSPEVLLGY------QYTTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       256 KL~DFGlA~~~~~~-------~~~~~GT~~Y~APEvl~~~------~yt~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                      ||+|||+|+.....       ....+||+.|||||++.+.      .|+.++||||||||||||+||.+||...
T Consensus       148 Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~  221 (303)
T 3hmm_A          148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH  221 (303)
T ss_dssp             EECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBC
T ss_pred             EEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCcc
Confidence            99999999654321       2235899999999999764      4778999999999999999999888543


No 72 
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=7.6e-44  Score=384.62  Aligned_cols=284  Identities=30%  Similarity=0.514  Sum_probs=227.2

Q ss_pred             CceEEEEEeccCCceeEEEeecc-CCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe--
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDA-EMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV--  182 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~-~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~--  182 (837)
                      ++|++++.||+|+||+||+|++. .+++.||||+++...   .....+.+|+.+++.+...    .||||+++++++.  
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~----~h~~i~~~~~~~~~~   86 (326)
T 1blx_A           11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF----EHPNVVRLFDVCTVS   86 (326)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHT----CCTTBCCEEEEEEEE
T ss_pred             hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhcc----CCCCeEeeeeeeeec
Confidence            78999999999999999999985 678999999997422   2223566888888888643    6999999999998  


Q ss_pred             ---ecceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          183 ---CQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       183 ---~~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                         .....++||||+.++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|
T Consensus        87 ~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~---~~~~~kl~D  163 (326)
T 1blx_A           87 RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLAD  163 (326)
T ss_dssp             ECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECS
T ss_pred             ccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEc---CCCCEEEec
Confidence               56789999999999999999876656699999999999999999999999999999999999995   678999999


Q ss_pred             cccccccCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHH
Q 003239          260 FGSACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV  337 (837)
Q Consensus       260 FGlA~~~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~  337 (837)
                      ||++.....  ......+|..|+|||++.+..++.++|||||||++|+|++|++||.+.+..+.+..+++.++..+...+
T Consensus       164 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  243 (326)
T 1blx_A          164 FGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW  243 (326)
T ss_dssp             CCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGS
T ss_pred             CcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccC
Confidence            999976543  234567899999999999999999999999999999999999999999999999999998883333221


Q ss_pred             HHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhh
Q 003239          338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS  417 (837)
Q Consensus       338 l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~  417 (837)
                      ..........+..                                          .....+.++                
T Consensus       244 ~~~~~~~~~~~~~------------------------------------------~~~~~~~~~----------------  265 (326)
T 1blx_A          244 PRDVALPRQAFHS------------------------------------------KSAQPIEKF----------------  265 (326)
T ss_dssp             CTTCSSCGGGSCC------------------------------------------CCCCCGGGT----------------
T ss_pred             ccccccchhhhcc------------------------------------------cCcchhhhc----------------
Confidence            1100000000000                                          000001111                


Q ss_pred             hhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       418 ~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                       ...++..+.+||.+||..||++|||++|+|+||||++...
T Consensus       266 -~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          266 -VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             -CCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             -cccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence             1124578899999999999999999999999999998653


No 73 
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=2.5e-43  Score=385.31  Aligned_cols=284  Identities=32%  Similarity=0.553  Sum_probs=224.2

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec-
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~-  184 (837)
                      .++|++.+.||+|+||+||+|++..+++.||||+++..  ......+.+|+.+++.+       .|+||+++++++... 
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~   82 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF-------KHENIITIFNIQRPDS   82 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHC-------CCTTBCCEEEECCCSC
T ss_pred             ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhC-------cCCCcCCeeeeecccc
Confidence            47999999999999999999999999999999999743  34456778999999998       689999999988764 


Q ss_pred             ----ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEec
Q 003239          185 ----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF  260 (837)
Q Consensus       185 ----~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DF  260 (837)
                          ...|+||||+.++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+||
T Consensus        83 ~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~---~~~~~kl~Df  156 (353)
T 2b9h_A           83 FENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN---SNCDLKVCDF  156 (353)
T ss_dssp             STTCCCEEEEECCCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCC
T ss_pred             cCccceEEEEEeccCccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc---CCCcEEEEec
Confidence                679999999999999888763   599999999999999999999999999999999999995   6788999999


Q ss_pred             ccccccCCc-------------ceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 003239          261 GSACTEDRT-------------VYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI  326 (837)
Q Consensus       261 GlA~~~~~~-------------~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~  326 (837)
                      |++......             ....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+..+.
T Consensus       157 g~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  236 (353)
T 2b9h_A          157 GLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF  236 (353)
T ss_dssp             TTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             ccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Confidence            999754321             123478999999999875 679999999999999999999999999999999999988


Q ss_pred             HHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCC
Q 003239          327 RILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYP  406 (837)
Q Consensus       327 ~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p  406 (837)
                      ...+.++..........                             ....++...   .+     .+....+..+.    
T Consensus       237 ~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~---~~-----~~~~~~~~~~~----  275 (353)
T 2b9h_A          237 GIIGTPHSDNDLRCIES-----------------------------PRAREYIKS---LP-----MYPAAPLEKMF----  275 (353)
T ss_dssp             HHHCCCCSTTTTTTCCC-----------------------------HHHHHHHHT---SC-----CCCCCCHHHHS----
T ss_pred             HHhCCCchhcccccccc-----------------------------chhhHHhhc---cc-----CCCCcchhhhc----
Confidence            88883332221110000                             000000000   00     00111122221    


Q ss_pred             CCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          407 YRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       407 ~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                                   ..+++++.+||++||+.||++|||++|+|+||||+....
T Consensus       276 -------------~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (353)
T 2b9h_A          276 -------------PRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD  314 (353)
T ss_dssp             -------------TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             -------------ccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCC
Confidence                         124578999999999999999999999999999998654


No 74 
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=1.9e-44  Score=392.59  Aligned_cols=266  Identities=24%  Similarity=0.356  Sum_probs=219.8

Q ss_pred             CceEEE-EEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          109 RRYIVK-DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       109 ~~Y~i~-~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ++|.+. ++||+|+||+||+|++..+++.||||+++..   ......+.+|+.+++.+.      .|+||+++++++...
T Consensus        28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~~iv~~~~~~~~~  101 (327)
T 3lm5_A           28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK------SCPRVINLHEVYENT  101 (327)
T ss_dssp             HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTT------TCTTBCCEEEEEECS
T ss_pred             hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhcc------CCCCEEEEEEEEEeC
Confidence            788888 8999999999999999999999999999853   233567889999999985      579999999999999


Q ss_pred             ceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +.+++||||+.+ +|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.....+.+||+|||++
T Consensus       102 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a  181 (327)
T 3lm5_A          102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS  181 (327)
T ss_dssp             SEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGC
T ss_pred             CeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccc
Confidence            999999999985 8888876554567999999999999999999999999999999999999974434689999999999


Q ss_pred             cccCCc--ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          264 CTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       264 ~~~~~~--~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ......  ....++|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+.......+..      
T Consensus       182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~------  255 (327)
T 3lm5_A          182 RKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEE------  255 (327)
T ss_dssp             EEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT------
T ss_pred             cccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCch------
Confidence            765432  344679999999999999999999999999999999999999999888777666554422200000      


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                                                  ....
T Consensus       256 ----------------------------------------------------------------------------~~~~  259 (327)
T 3lm5_A          256 ----------------------------------------------------------------------------TFSS  259 (327)
T ss_dssp             ----------------------------------------------------------------------------TTTT
T ss_pred             ----------------------------------------------------------------------------hhcc
Confidence                                                                                        0011


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFTCPY  462 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~~~~~  462 (837)
                      .++.+.+||.+||+.||++|||++|+|+||||++..+....
T Consensus       260 ~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~~~~~  300 (327)
T 3lm5_A          260 VSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDFENLF  300 (327)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCTTCC-
T ss_pred             cCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccccccc
Confidence            34678999999999999999999999999999997775443


No 75 
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=8.6e-44  Score=381.59  Aligned_cols=283  Identities=30%  Similarity=0.498  Sum_probs=218.2

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe----
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV----  182 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~----  182 (837)
                      .++|++++.||+|+||.||+|++..+++.||||++... ....+.+.+|+++++.+       .||||+++++++.    
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~~~   82 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL-------DHDNIVKVFEILGPSGS   82 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTC-------CCTTBCCEEEEECTTSC
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhc-------CCCCeeEEEEecccccc
Confidence            38999999999999999999999999999999999754 34567788999999988       6899999999874    


Q ss_pred             ----------ecceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCC
Q 003239          183 ----------CQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKP  252 (837)
Q Consensus       183 ----------~~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~  252 (837)
                                .....|+||||+.++|.+++..   +.+++..++.++.||+.||+|||++||+||||||+|||++  ..+
T Consensus        83 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~  157 (320)
T 2i6l_A           83 QLTDDVGSLTELNSVYIVQEYMETDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN--TED  157 (320)
T ss_dssp             BCCC----CCSCSEEEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE--TTT
T ss_pred             ccccccccccccCceeEEeeccCCCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc--CCC
Confidence                      3468999999999999988854   3599999999999999999999999999999999999996  345


Q ss_pred             CeEEEEecccccccCC------cceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 003239          253 AEIKIIDFGSACTEDR------TVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM  325 (837)
Q Consensus       253 ~~IKL~DFGlA~~~~~------~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I  325 (837)
                      +.+||+|||++.....      ......++..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+.+..+
T Consensus       158 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  237 (320)
T 2i6l_A          158 LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLI  237 (320)
T ss_dssp             TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            7899999999975432      1233467899999999876 57999999999999999999999999999998888888


Q ss_pred             HHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcC
Q 003239          326 IRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNY  405 (837)
Q Consensus       326 ~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~  405 (837)
                      .+.......+...+.......+....                               ..        .....+..+.   
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~--------~~~~~~~~~~---  275 (320)
T 2i6l_A          238 LESIPVVHEEDRQELLSVIPVYIRND-------------------------------MT--------EPHKPLTQLL---  275 (320)
T ss_dssp             HHHSCCCCHHHHHHHHTTSCHHHHHH-------------------------------TT--------SCCCCHHHHS---
T ss_pred             HHhcCCCchhhhhhhhhcCccccccc-------------------------------cc--------CCCCChhHhc---
Confidence            88766222222111111100000000                               00        0011111211   


Q ss_pred             CCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          406 PYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       406 p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                                    ..++.++.+||++||+.||++|||++|+|+||||+...+
T Consensus       276 --------------~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~  314 (320)
T 2i6l_A          276 --------------PGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSF  314 (320)
T ss_dssp             --------------TTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred             --------------chhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccC
Confidence                          124578999999999999999999999999999998665


No 76 
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=3e-43  Score=372.61  Aligned_cols=259  Identities=27%  Similarity=0.413  Sum_probs=218.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++...   ....+.+.+|+.+++.+       .|+||+++++++...
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~   77 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-------QHPNIVRLHDSIQEE   77 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEEECS
T ss_pred             hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHc-------CCCCcCeEEEEEEcC
Confidence            48999999999999999999999999999999999753   34456788899999998       589999999999999


Q ss_pred             ceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +..++||||+.+ +|.+.+...  ..+++..++.++.||+.||.|||++||+||||||+||+++.+.....+||+|||++
T Consensus        78 ~~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~  155 (284)
T 3kk8_A           78 SFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA  155 (284)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             CEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence            999999999974 888887765  35999999999999999999999999999999999999975555667999999999


Q ss_pred             cccCCc--ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          264 CTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       264 ~~~~~~--~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ......  .....+|+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.......+.       
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------  228 (284)
T 3kk8_A          156 IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPS-------  228 (284)
T ss_dssp             EECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT-------
T ss_pred             EEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCc-------
Confidence            655433  23457899999999999999999999999999999999999999888776665554432110000       


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                                                 .....
T Consensus       229 ---------------------------------------------------------------------------~~~~~  233 (284)
T 3kk8_A          229 ---------------------------------------------------------------------------PEWDT  233 (284)
T ss_dssp             ---------------------------------------------------------------------------TTTTT
T ss_pred             ---------------------------------------------------------------------------hhhcc
Confidence                                                                                       00011


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      .++++.+||.+||+.||++|||++|+|+||||++..
T Consensus       234 ~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          234 VTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCC
T ss_pred             cCHHHHHHHHHHcccChhhCCCHHHHhcCccccCCh
Confidence            346789999999999999999999999999998854


No 77 
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=8.1e-44  Score=388.30  Aligned_cols=253  Identities=23%  Similarity=0.391  Sum_probs=207.6

Q ss_pred             CCceEEEEEeccCCceeEEEeecc---CCCeEEEEEEEeCCh-----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDA---EMNSFVAVKIIKNQP-----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYE  179 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~---~tg~~VAIKiik~~~-----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d  179 (837)
                      .++|+++++||+|+||+||+|++.   .+++.||||++++..     .....+.+|+.+|+.+       .||||+++++
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~   88 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV-------KHPFIVDLIY   88 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHC-------CCTTBCCEEE
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhC-------CCCCccceeE
Confidence            378999999999999999999875   689999999998542     2345577899999998       6899999999


Q ss_pred             EEeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEE
Q 003239          180 YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII  258 (837)
Q Consensus       180 ~f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~  258 (837)
                      ++...+.+||||||+. ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~  163 (327)
T 3a62_A           89 AFQTGGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN---HQGHVKLT  163 (327)
T ss_dssp             EEECSSCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTSCEEEC
T ss_pred             EEEcCCEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEEC---CCCcEEEE
Confidence            9999999999999997 5888888764  3599999999999999999999999999999999999995   67899999


Q ss_pred             ecccccccC---CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCch
Q 003239          259 DFGSACTED---RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD  335 (837)
Q Consensus       259 DFGlA~~~~---~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~  335 (837)
                      |||++....   ......+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+.+..+.+....    
T Consensus       164 Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~----  239 (327)
T 3a62_A          164 DFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLN----  239 (327)
T ss_dssp             CCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC----
T ss_pred             eCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC----
Confidence            999986432   2233457899999999999999999999999999999999999999988776666555431100    


Q ss_pred             HHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhh
Q 003239          336 YVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED  415 (837)
Q Consensus       336 ~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~  415 (837)
                                                                                           +|         
T Consensus       240 ---------------------------------------------------------------------~p---------  241 (327)
T 3a62_A          240 ---------------------------------------------------------------------LP---------  241 (327)
T ss_dssp             ---------------------------------------------------------------------CC---------
T ss_pred             ---------------------------------------------------------------------CC---------
Confidence                                                                                 00         


Q ss_pred             hhhhHHhHHHHHHHHHHhcccCcCCCC-----CHHHHHcCccCCCCCC
Q 003239          416 ISKESQIRLALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPF  458 (837)
Q Consensus       416 l~~~~~~s~~l~DLL~kmL~~DP~kRp-----Ta~EaL~HPff~~~~~  458 (837)
                          ..++..+.+||++||..||++||     |++|+|+||||++..+
T Consensus       242 ----~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~  285 (327)
T 3a62_A          242 ----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINW  285 (327)
T ss_dssp             ----TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCH
T ss_pred             ----CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCH
Confidence                01346789999999999999999     8999999999998654


No 78 
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=3.2e-43  Score=380.88  Aligned_cols=286  Identities=23%  Similarity=0.437  Sum_probs=217.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee--cc
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC--QR  185 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~--~~  185 (837)
                      .++|+++++||+|+||+||+|++..+++.||||+++...  .+.+.+|+.+|+.++      .|+||+++++++..  ..
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~E~~~l~~l~------~~~~i~~~~~~~~~~~~~  106 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLR------GGPNIITLADIVKDPVSR  106 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC--HHHHHHHHHHHHHHT------TSTTBCCEEEEEECTTTC
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc--hHHHHHHHHHHHHcC------CCCCEEEeeeeeccCCCC
Confidence            489999999999999999999999999999999998543  467889999999995      48999999999998  67


Q ss_pred             eEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      ..++||||+.+ +|.+++.     .+++..++.++.||+.||+|||++||+||||||+|||++  .+...+||+|||++.
T Consensus       107 ~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~--~~~~~~kl~Dfg~a~  179 (330)
T 3nsz_A          107 TPALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAE  179 (330)
T ss_dssp             CEEEEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEECCCTTCE
T ss_pred             ceEEEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEc--CCCCEEEEEeCCCce
Confidence            89999999985 6666552     389999999999999999999999999999999999996  233489999999997


Q ss_pred             ccC--CcceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCC-CCCCHHHHHHHHHHHhCCCCchHHHHh
Q 003239          265 TED--RTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLF-PGASEFDLLRRMIRILGAQPPDYVLKE  340 (837)
Q Consensus       265 ~~~--~~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF-~g~s~~e~l~~I~~~lG~~Pp~~~l~~  340 (837)
                      ...  ......+++..|+|||++.+ ..++.++|||||||++|+|++|+.|| .+....+.+..+.+.++.......+..
T Consensus       180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  259 (330)
T 3nsz_A          180 FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK  259 (330)
T ss_dssp             ECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred             EcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHH
Confidence            543  33345678999999999987 57999999999999999999999888 456777888888877761111111110


Q ss_pred             hhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhH
Q 003239          341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES  420 (837)
Q Consensus       341 ~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~  420 (837)
                      ...                   ..                              ...+.+++..................
T Consensus       260 ~~~-------------------~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (330)
T 3nsz_A          260 YNI-------------------EL------------------------------DPRFNDILGRHSRKRWERFVHSENQH  290 (330)
T ss_dssp             TTC-------------------CC------------------------------CTHHHHHHCCCCCCCGGGGCCTTTGG
T ss_pred             hcc-------------------cc------------------------------ccchhhhhhhccccchhhhccccccc
Confidence            000                   00                              00000000000000000000001112


Q ss_pred             HhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       421 ~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      .+++++.+||++||++||++|||++|||+||||++..
T Consensus       291 ~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          291 LVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             GCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             cCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence            3568899999999999999999999999999999754


No 79 
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=4e-44  Score=378.56  Aligned_cols=251  Identities=24%  Similarity=0.375  Sum_probs=194.4

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      ..++|+++++||+|+||+||+|++..+++.||||+++..    ....+.+.+|+.+++.+       .||||+++++++.
T Consensus        11 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~   83 (275)
T 2eue_A           11 HIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL-------RHPHIIKLYDVIK   83 (275)
T ss_dssp             BCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHC-------CCTTBCCEEEEEE
T ss_pred             cccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhC-------CCCCeEEEEEEEe
Confidence            347899999999999999999999999999999999753    23355778899999998       5899999999999


Q ss_pred             ecceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          183 CQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       183 ~~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      ..+..++||||++++|.+.+...  ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+
T Consensus        84 ~~~~~~lv~e~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~  158 (275)
T 2eue_A           84 SKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGL  158 (275)
T ss_dssp             CSSCEEEEEECCCEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTSCEEECCSSC
T ss_pred             cCCeEEEEehhcCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEEC---CCCCEEEeeccc
Confidence            99999999999999999988765  3699999999999999999999999999999999999995   677899999999


Q ss_pred             ccccCC--cceeeccCccccCchhhcCCCC-CccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHH
Q 003239          263 ACTEDR--TVYSYIQSRYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       263 A~~~~~--~~~~~~GT~~Y~APEvl~~~~y-t~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      +.....  .....++|+.|+|||++.+..+ +.++|||||||++|+|++|+.||...+.......+......        
T Consensus       159 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~--------  230 (275)
T 2eue_A          159 SNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYT--------  230 (275)
T ss_dssp             C---------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC--------
T ss_pred             ceeccCcccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------
Confidence            965432  2345578999999999988765 78999999999999999999999887765554444331100        


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                                       +|             
T Consensus       231 -----------------------------------------------------------------~~-------------  232 (275)
T 2eue_A          231 -----------------------------------------------------------------LP-------------  232 (275)
T ss_dssp             -----------------------------------------------------------------CC-------------
T ss_pred             -----------------------------------------------------------------CC-------------
Confidence                                                                             00             


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                      ...++.+.+||++||+.||++|||++|+|+||||+.
T Consensus       233 ~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h~~f~~  268 (275)
T 2eue_A          233 KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             ccCCHHHHHHHHHHhhcCHhHCCCHHHHhhCCeecc
Confidence            013467899999999999999999999999999986


No 80 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=3.9e-44  Score=396.93  Aligned_cols=259  Identities=28%  Similarity=0.364  Sum_probs=202.2

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|+++++||+|+||+||+|++..+++.||||++.......+.+.+|+.+++.+       .||||+++++++...+.+
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~~~~~~~   91 (361)
T 3uc3_A           19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSL-------RHPNIVRFKEVILTPTHL   91 (361)
T ss_dssp             TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHC-------CCTTBCCEEEEEECSSEE
T ss_pred             CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhC-------CCCCCCcEEEEEeeCCEE
Confidence            3799999999999999999999999999999999987665567788999999998       689999999999999999


Q ss_pred             EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      |||||||. ++|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++.+ ....+||+|||+++..
T Consensus        92 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~-~~~~~kl~Dfg~a~~~  168 (361)
T 3uc3_A           92 AIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS-PAPRLKICDFGYSKSS  168 (361)
T ss_dssp             EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS-SSCCEEECCCCCC---
T ss_pred             EEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC-CCceEEEeecCccccc
Confidence            99999996 5898888664  369999999999999999999999999999999999999622 2345999999999643


Q ss_pred             --CCcceeeccCccccCchhhcCCCCCcc-chHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhc
Q 003239          267 --DRTVYSYIQSRYYRSPEVLLGYQYTTA-IDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN  343 (837)
Q Consensus       267 --~~~~~~~~GT~~Y~APEvl~~~~yt~k-sDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~  343 (837)
                        .......+||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.+.........+++.+....          
T Consensus       169 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~----------  238 (361)
T 3uc3_A          169 VLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK----------  238 (361)
T ss_dssp             ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTC----------
T ss_pred             cccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCC----------
Confidence              233345689999999999998887755 8999999999999999999976543222222211110000          


Q ss_pred             chhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhH
Q 003239          344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR  423 (837)
Q Consensus       344 ~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s  423 (837)
                                                                .                 .+|           ....++
T Consensus       239 ------------------------------------------~-----------------~~~-----------~~~~~s  248 (361)
T 3uc3_A          239 ------------------------------------------Y-----------------SIP-----------DDIRIS  248 (361)
T ss_dssp             ------------------------------------------C-----------------CCC-----------TTSCCC
T ss_pred             ------------------------------------------C-----------------CCC-----------CcCCCC
Confidence                                                      0                 000           001134


Q ss_pred             HHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       424 ~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      +.+.+||++||+.||++|||++|||+||||.+.
T Consensus       249 ~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~  281 (361)
T 3uc3_A          249 PECCHLISRIFVADPATRISIPEIKTHSWFLKN  281 (361)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence            678999999999999999999999999999753


No 81 
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=3.8e-44  Score=407.39  Aligned_cols=254  Identities=25%  Similarity=0.410  Sum_probs=206.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|+++++||+|+||+||+|++..+++.||||+++..    ......+.+|+.+|+.+       .||||++++++|..
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~l~~~~~~  219 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-------RHPFLTALKYSFQT  219 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCC-------SCTTSCCEEEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhC-------CCCeEeeEEEEEee
Confidence            47899999999999999999999999999999999853    22334455677666655       68999999999999


Q ss_pred             cceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhc-CCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          184 QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       184 ~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs-~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      .+.+|||||||.+ +|.+++...  ..+++..++.++.||+.||+|||+ +|||||||||+||||+   .++.+||+|||
T Consensus       220 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~---~~~~~kl~DFG  294 (446)
T 4ejn_A          220 HDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFG  294 (446)
T ss_dssp             TTEEEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEEC---SSSCEEECCCC
T ss_pred             CCEEEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEEC---CCCCEEEccCC
Confidence            9999999999985 888887664  369999999999999999999998 9999999999999995   67899999999


Q ss_pred             cccccC---CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHH
Q 003239          262 SACTED---RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL  338 (837)
Q Consensus       262 lA~~~~---~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l  338 (837)
                      ++....   ......+||+.|+|||++.+..|+.++||||||||+|||++|+.||.+.+..+....+..... .      
T Consensus       295 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~-~------  367 (446)
T 4ejn_A          295 LCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI-R------  367 (446)
T ss_dssp             CCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-C------
T ss_pred             CceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCC-C------
Confidence            997532   234456899999999999999999999999999999999999999988877666555433100 0      


Q ss_pred             HhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhh
Q 003239          339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK  418 (837)
Q Consensus       339 ~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~  418 (837)
                                                                                        +|            
T Consensus       368 ------------------------------------------------------------------~p------------  369 (446)
T 4ejn_A          368 ------------------------------------------------------------------FP------------  369 (446)
T ss_dssp             ------------------------------------------------------------------CC------------
T ss_pred             ------------------------------------------------------------------CC------------
Confidence                                                                              00            


Q ss_pred             hHHhHHHHHHHHHHhcccCcCCCC-----CHHHHHcCccCCCCCCC
Q 003239          419 ESQIRLALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPFT  459 (837)
Q Consensus       419 ~~~~s~~l~DLL~kmL~~DP~kRp-----Ta~EaL~HPff~~~~~~  459 (837)
                       ..+++++.+||.+||+.||++||     |++|+|+||||++..+.
T Consensus       370 -~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~  414 (446)
T 4ejn_A          370 -RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQ  414 (446)
T ss_dssp             -TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHH
T ss_pred             -ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHH
Confidence             01346789999999999999999     99999999999987654


No 82 
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=2.9e-43  Score=386.44  Aligned_cols=278  Identities=27%  Similarity=0.552  Sum_probs=221.7

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|++.+.||+|+||+||+|++..+++.||||++...   ....+.+.+|+.+++.+       .|+||+++++++....
T Consensus        24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~   96 (353)
T 3coi_A           24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM-------QHENVIGLLDVFTPAS   96 (353)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHC-------CCTTBCCCSEEECSCS
T ss_pred             ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhc-------CCCCcccHhheEeccc
Confidence            7899999999999999999999999999999999753   34456788999999998       6899999999998765


Q ss_pred             e------EEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          186 H------LCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       186 ~------l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      .      +|+||||+.++|.+++.    ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|
T Consensus        97 ~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~D  169 (353)
T 3coi_A           97 SLRNFYDFYLVMPFMQTDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILD  169 (353)
T ss_dssp             SGGGCCCCEEEEECCSEEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---TTCCEEECS
T ss_pred             ccccceeEEEEeccccCCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeEC---CCCcEEEee
Confidence            4      59999999998877653    3499999999999999999999999999999999999995   678899999


Q ss_pred             cccccccCCcceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHH
Q 003239          260 FGSACTEDRTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL  338 (837)
Q Consensus       260 FGlA~~~~~~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l  338 (837)
                      ||++..........++|+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.+..| .|+..+.
T Consensus       170 fg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~  248 (353)
T 3coi_A          170 FGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG-VPGTEFV  248 (353)
T ss_dssp             TTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHC-BCCHHHH
T ss_pred             cccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC-CCCHHHH
Confidence            9999877666666789999999999987 5889999999999999999999999999999999999999998 4544443


Q ss_pred             Hhhhcc--hhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhh
Q 003239          339 KEAKNT--SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI  416 (837)
Q Consensus       339 ~~~k~~--~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l  416 (837)
                      ......  ..++...                                  +....     ..+..                
T Consensus       249 ~~~~~~~~~~~~~~~----------------------------------~~~~~-----~~~~~----------------  273 (353)
T 3coi_A          249 QKLNDKAAKSYIQSL----------------------------------PQTPR-----KDFTQ----------------  273 (353)
T ss_dssp             TTCSCHHHHHHHHTS----------------------------------CBCSS-----CCTTT----------------
T ss_pred             HHHhhHHHHHHHHhC----------------------------------cCCCC-----ccHHH----------------
Confidence            321110  0000000                                  00000     00000                


Q ss_pred             hhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       417 ~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                       .....++.+.+||.+||+.||++|||++|+|+||||+...
T Consensus       274 -~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          274 -LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             -TCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             -hcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence             0112457899999999999999999999999999998754


No 83 
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=3.3e-43  Score=382.71  Aligned_cols=284  Identities=30%  Similarity=0.536  Sum_probs=221.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|+++++||+|+||.||+|++..+++.||||++...   ....+.+.+|+.+++.+       .|+||+++++++...
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~   96 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL-------RHENLVNLLEVCKKK   96 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEEEET
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhC-------CCCCEeeEEEEeecC
Confidence            37999999999999999999999999999999998643   33455677899999999       589999999999999


Q ss_pred             ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          185 RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       185 ~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      +..|+||||+.+++++.+.... ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||++.
T Consensus        97 ~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~  172 (331)
T 4aaa_A           97 KRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFAR  172 (331)
T ss_dssp             TEEEEEEECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCTTC-
T ss_pred             CEEEEEEecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEc---CCCcEEEEeCCCce
Confidence            9999999999976555443332 4699999999999999999999999999999999999995   66799999999996


Q ss_pred             ccCC---cceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHh
Q 003239          265 TEDR---TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE  340 (837)
Q Consensus       265 ~~~~---~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~  340 (837)
                      ....   .....++|+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+..+.+..+....+..++..... 
T Consensus       173 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-  251 (331)
T 4aaa_A          173 TLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQEL-  251 (331)
T ss_dssp             -----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHH-
T ss_pred             eecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhH-
Confidence            5432   23445789999999999876 789999999999999999999999999999999999999888554433211 


Q ss_pred             hhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhH
Q 003239          341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES  420 (837)
Q Consensus       341 ~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~  420 (837)
                      ..... .+....                                .+..    -....+..                 ...
T Consensus       252 ~~~~~-~~~~~~--------------------------------~~~~----~~~~~~~~-----------------~~~  277 (331)
T 4aaa_A          252 FNKNP-VFAGVR--------------------------------LPEI----KEREPLER-----------------RYP  277 (331)
T ss_dssp             HHHCG-GGTTCC--------------------------------CCCC----SSCCCHHH-----------------HST
T ss_pred             hhhcc-cccccc--------------------------------Cccc----cccchhhh-----------------ccc
Confidence            11000 000000                                0000    00000111                 111


Q ss_pred             HhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       421 ~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      .+++.+.+||.+||+.||++|||++|+|+||||+...
T Consensus       278 ~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  314 (331)
T 4aaa_A          278 KLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDG  314 (331)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGG
T ss_pred             chhHHHHHHHHHHhccCcccCCCHHHHhcCchhccCC
Confidence            2457899999999999999999999999999998743


No 84 
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.1e-43  Score=395.47  Aligned_cols=261  Identities=21%  Similarity=0.351  Sum_probs=217.0

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|+++++||+|+||+||+|+++.+++.||||++++..    ...+.+.+|+.++..+       .|+||++++++|.+
T Consensus        60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~-------~hp~Iv~l~~~~~~  132 (412)
T 2vd5_A           60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG-------DRRWITQLHFAFQD  132 (412)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHS-------CTTTBCCEEEEEEC
T ss_pred             hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhc-------CCCCeeeEEEEEee
Confidence            378999999999999999999999999999999997532    2223467899998887       68999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+|||||||. ++|.+++.... ..+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||+
T Consensus       133 ~~~~~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld---~~g~vkL~DFGl  208 (412)
T 2vd5_A          133 ENYLYLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD---RCGHIRLADFGS  208 (412)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTT
T ss_pred             CCEEEEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeec---CCCCEEEeechh
Confidence            999999999996 69999887643 4699999999999999999999999999999999999995   678999999999


Q ss_pred             ccccCCc----ceeeccCccccCchhhc-------CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q 003239          263 ACTEDRT----VYSYIQSRYYRSPEVLL-------GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA  331 (837)
Q Consensus       263 A~~~~~~----~~~~~GT~~Y~APEvl~-------~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~  331 (837)
                      +......    ....+||+.|+|||++.       ...|+.++|||||||++|||++|++||.+.+..+.+.+|+.... 
T Consensus       209 a~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-  287 (412)
T 2vd5_A          209 CLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKE-  287 (412)
T ss_dssp             CEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHH-
T ss_pred             heeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhccc-
Confidence            9765332    22458999999999997       35789999999999999999999999999888777666653110 


Q ss_pred             CCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCC
Q 003239          332 QPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNL  411 (837)
Q Consensus       332 ~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l  411 (837)
                                        ..                                                    .+|.    
T Consensus       288 ------------------~~----------------------------------------------------~~p~----  293 (412)
T 2vd5_A          288 ------------------HL----------------------------------------------------SLPL----  293 (412)
T ss_dssp             ------------------HC----------------------------------------------------CCC-----
T ss_pred             ------------------Cc----------------------------------------------------CCCc----
Confidence                              00                                                    0000    


Q ss_pred             chhhhhhhHHhHHHHHHHHHHhcccCcCCCC---CHHHHHcCccCCCCCCCCC
Q 003239          412 SMEDISKESQIRLALVDFLKGLVEFDPAKRW---SPFQASRHPFVTGEPFTCP  461 (837)
Q Consensus       412 ~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRp---Ta~EaL~HPff~~~~~~~~  461 (837)
                            ....+++++++||++||+ ||++|+   +++|+++||||++..|...
T Consensus       294 ------~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~w~~l  339 (412)
T 2vd5_A          294 ------VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLDWDGL  339 (412)
T ss_dssp             ---------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCCSTTS
T ss_pred             ------cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence                  001245788999999999 999984   9999999999999877654


No 85 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=2.1e-43  Score=395.79  Aligned_cols=259  Identities=26%  Similarity=0.431  Sum_probs=217.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecce
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH  186 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~  186 (837)
                      .++|++++.||+|+||+||+|.+..+++.||+|++... ......+.+|+.+|+.+       .|+||+++++++...+.
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l-------~hpnIv~~~~~~~~~~~  122 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL-------HHPKLINLHDAFEDKYE  122 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-------CSTTBCCEEEEEECSSE
T ss_pred             ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC-------CCcCCCeEEEEEEeCCE
Confidence            47899999999999999999999999999999999864 33455788899999888       68999999999999999


Q ss_pred             EEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       187 l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      +|||||||. ++|.+++.... ..+++..++.++.||+.||+|||++|||||||||+|||++.+ ..+.+||+|||++..
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~~~vkL~DFG~a~~  200 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLATK  200 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTT-CCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TCCCEEECCCTTCEE
T ss_pred             EEEEEEcCCCCcHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecC-CCCceEEEeccccee
Confidence            999999997 58888876542 459999999999999999999999999999999999999632 457899999999976


Q ss_pred             cCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhc
Q 003239          266 EDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN  343 (837)
Q Consensus       266 ~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~  343 (837)
                      ...  .....++|+.|+|||++.+..++.++||||||||+|||++|..||.+.+..+.+..+.......+          
T Consensus       201 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~----------  270 (387)
T 1kob_A          201 LNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD----------  270 (387)
T ss_dssp             CCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCC----------
T ss_pred             cCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----------
Confidence            543  23456899999999999999999999999999999999999999998877666655543110000          


Q ss_pred             chhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhH
Q 003239          344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR  423 (837)
Q Consensus       344 ~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s  423 (837)
                                                                         ..                     ....++
T Consensus       271 ---------------------------------------------------~~---------------------~~~~~s  278 (387)
T 1kob_A          271 ---------------------------------------------------ED---------------------AFSSVS  278 (387)
T ss_dssp             ---------------------------------------------------SS---------------------TTTTSC
T ss_pred             ---------------------------------------------------cc---------------------ccccCC
Confidence                                                               00                     001134


Q ss_pred             HHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       424 ~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      +++.+||++||+.||++|||++|+|+||||++..
T Consensus       279 ~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  312 (387)
T 1kob_A          279 PEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDH  312 (387)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhhCccccCCc
Confidence            6789999999999999999999999999999754


No 86 
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=4.3e-43  Score=385.62  Aligned_cols=283  Identities=28%  Similarity=0.512  Sum_probs=217.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC------------hhhHHHHHHHHHHHHHhhcccCCCCCCcee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ------------PAYYQQALVEVSILTTLNKKYDREDKHHIV  175 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~------------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIV  175 (837)
                      .++|++.++||+|+||.||+|.+.. ++.||||++...            ....+.+.+|+++++.+       .||||+
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv   92 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHF-------HHPNIL   92 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHC-------CCTTBC
T ss_pred             ccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhC-------CCcCcc
Confidence            4899999999999999999998865 899999998632            22347788999999999       589999


Q ss_pred             EEeEEEeec-----ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccC
Q 003239          176 RIYEYFVCQ-----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV  250 (837)
Q Consensus       176 kl~d~f~~~-----~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~  250 (837)
                      ++++++...     ..+|+||||+.++|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+|||++   
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~---  168 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---  168 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---
T ss_pred             ceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEc---
Confidence            999999543     4689999999999999887553 4699999999999999999999999999999999999995   


Q ss_pred             CCCeEEEEecccccccC--CcceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Q 003239          251 KPAEIKIIDFGSACTED--RTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIR  327 (837)
Q Consensus       251 ~~~~IKL~DFGlA~~~~--~~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~  327 (837)
                      .++.+||+|||++....  .......+|+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.+..+.+..+.+
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~  248 (362)
T 3pg1_A          169 DNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE  248 (362)
T ss_dssp             TTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            67889999999997433  23345678999999999987 5799999999999999999999999999999999999999


Q ss_pred             HhCCCCchHHHHhhhc-chhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCC
Q 003239          328 ILGAQPPDYVLKEAKN-TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYP  406 (837)
Q Consensus       328 ~lG~~Pp~~~l~~~k~-~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p  406 (837)
                      ..+.++.+.+...... ...++...                                      ...+....+..+.    
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~~~~~~~~~----  286 (362)
T 3pg1_A          249 VVGTPKIEDVVMFSSPSARDYLRNS--------------------------------------LSNVPARAWTAVV----  286 (362)
T ss_dssp             HHCCCCHHHHHHTSCHHHHHHTTTC--------------------------------------CCCCCCCCHHHHS----
T ss_pred             HcCCCChHHhhhccchhhhHHHHhh--------------------------------------cccCChhhHHhhC----
Confidence            9984443332211100 00000000                                      0000111111111    


Q ss_pred             CCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          407 YRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       407 ~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                                   ...++.+.+||.+||+.||++|||++|+|+||||++..
T Consensus       287 -------------~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          287 -------------PTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             -------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             -------------CCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence                         12457899999999999999999999999999999853


No 87 
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=2e-43  Score=380.20  Aligned_cols=202  Identities=28%  Similarity=0.461  Sum_probs=171.4

Q ss_pred             CCceEEE-EEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          108 QRRYIVK-DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       108 ~~~Y~i~-~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      .++|++. ++||+|+||+||+|++..+++.||||+++... ...+.+.+|+++|+++.      .||||+++++++...+
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~------~h~~i~~~~~~~~~~~   84 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ------GHRNVLELIEFFEEED   84 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTC------CCTTBCCEEEEEEETT
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhc------CCCCeeeEEEEEeeCC
Confidence            3789986 78999999999999999999999999997643 34567889999998863      6899999999999999


Q ss_pred             eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .+||||||+. ++|.+++...  ..+++..++.++.||+.||+|||+++|+||||||+|||++.+.....+||+|||++.
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~  162 (316)
T 2ac3_A           85 RFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGS  162 (316)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred             EEEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence            9999999997 6899988765  369999999999999999999999999999999999999754444569999999986


Q ss_pred             ccCC----------cceeeccCccccCchhhcC-----CCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          265 TEDR----------TVYSYIQSRYYRSPEVLLG-----YQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       265 ~~~~----------~~~~~~GT~~Y~APEvl~~-----~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                      ....          .....+||+.|+|||++.+     ..++.++|||||||++|||++|+.||.+..
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  230 (316)
T 2ac3_A          163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC  230 (316)
T ss_dssp             -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred             ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccc
Confidence            4321          1224468999999999975     468999999999999999999999997654


No 88 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=1.3e-43  Score=386.25  Aligned_cols=255  Identities=22%  Similarity=0.329  Sum_probs=206.6

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      .++|+++++||+|+||+||+|++..+++.||||++....  ...+.+.+|+.+++.+       .|+||+++++++...+
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~hpnIv~~~~~~~~~~   78 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------NHENVVKFYGHRREGN   78 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHC-------CCTTBCCEEEEEECSS
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhC-------CCCCCCeEEEEEecCC
Confidence            379999999999999999999999999999999997543  2345678899999998       6899999999999999


Q ss_pred             eEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      ..|||||||.+ +|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++.
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~Dfg~a~  153 (323)
T 3tki_A           79 IQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLAT  153 (323)
T ss_dssp             EEEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             eEEEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEe---CCCCEEEEEeeccc
Confidence            99999999974 888877543  3599999999999999999999999999999999999995   66889999999996


Q ss_pred             ccC-----CcceeeccCccccCchhhcCCCC-CccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHH
Q 003239          265 TED-----RTVYSYIQSRYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVL  338 (837)
Q Consensus       265 ~~~-----~~~~~~~GT~~Y~APEvl~~~~y-t~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l  338 (837)
                      ...     ......+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.................        
T Consensus       154 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~--------  225 (323)
T 3tki_A          154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK--------  225 (323)
T ss_dssp             ECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC--------
T ss_pred             eeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc--------
Confidence            432     12235688999999999988775 7899999999999999999999976543211111000000        


Q ss_pred             HhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhh
Q 003239          339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK  418 (837)
Q Consensus       339 ~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~  418 (837)
                                                                          ..                       ...
T Consensus       226 ----------------------------------------------------~~-----------------------~~~  230 (323)
T 3tki_A          226 ----------------------------------------------------TY-----------------------LNP  230 (323)
T ss_dssp             ----------------------------------------------------TT-----------------------STT
T ss_pred             ----------------------------------------------------cc-----------------------CCc
Confidence                                                                00                       000


Q ss_pred             hHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       419 ~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      ...+++.+.+||++||+.||++|||++|+|+||||++..
T Consensus       231 ~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          231 WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             cccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence            112456789999999999999999999999999998743


No 89 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=1.7e-44  Score=397.23  Aligned_cols=196  Identities=28%  Similarity=0.455  Sum_probs=175.1

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ++|++.+.||+|+||+||+|++..+++.||||++++..    .....+.+|+.+++.+       .||||+++++++...
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpnIv~l~~~~~~~   81 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLL-------RHPHIIKLYDVITTP   81 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTC-------CCTTBCCEEEEEECS
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhC-------CCCCCCeEEEEEEeC
Confidence            79999999999999999999999999999999997532    2234678899999888       689999999999999


Q ss_pred             ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          185 RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       185 ~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      +.+++||||++|+|.+++....  .+++.+++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||++.
T Consensus        82 ~~~~lv~E~~~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~DFG~s~  156 (336)
T 3h4j_B           82 TDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD---DNLNVKIADFGLSN  156 (336)
T ss_dssp             SEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEEC---TTCCEEECCSSCTB
T ss_pred             CEEEEEEECCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEc---CCCCEEEEEeccce
Confidence            9999999999999999887653  699999999999999999999999999999999999995   67889999999997


Q ss_pred             ccCC--cceeeccCccccCchhhcCCCC-CccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          265 TEDR--TVYSYIQSRYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       265 ~~~~--~~~~~~GT~~Y~APEvl~~~~y-t~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                      ....  .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.
T Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~  211 (336)
T 3h4j_B          157 IMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE  211 (336)
T ss_dssp             TTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred             eccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCc
Confidence            5432  3356689999999999998876 68999999999999999999999654


No 90 
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=2e-43  Score=376.42  Aligned_cols=258  Identities=28%  Similarity=0.376  Sum_probs=211.0

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ..++|++.++||+|+||+||+|++..+++.||+|++....  ...+.+.+|+++|+.+       .||||+++++++...
T Consensus        20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~~   92 (285)
T 3is5_A           20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL-------DHPNIIKIFEVFEDY   92 (285)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTC-------CCTTBCCEEEEEECS
T ss_pred             hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhC-------CCchHHhHHHheecC
Confidence            3479999999999999999999999999999999998543  3457788999999998       689999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhh--ccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          185 RHLCICFELLD-SNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~--~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      +..|+||||+. ++|.+.+...  ....+++..++.++.||+.||+|||++||+||||||+|||++.+...+.+||+|||
T Consensus        93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg  172 (285)
T 3is5_A           93 HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFG  172 (285)
T ss_dssp             SEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCC
T ss_pred             CeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeee
Confidence            99999999998 4888887654  23569999999999999999999999999999999999999755567889999999


Q ss_pred             cccccCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHH
Q 003239          262 SACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       262 lA~~~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      ++.....  ......+|+.|+|||++. ..++.++|||||||++|+|++|+.||.+.+..+....+.....   .     
T Consensus       173 ~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~---~-----  243 (285)
T 3is5_A          173 LAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP---N-----  243 (285)
T ss_dssp             CCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC---C-----
T ss_pred             cceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCc---c-----
Confidence            9975432  234567899999999986 4789999999999999999999999988776554433322000   0     


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                           +            +.          ..
T Consensus       244 -----------------------------------------------------~------------~~----------~~  248 (285)
T 3is5_A          244 -----------------------------------------------------Y------------AV----------EC  248 (285)
T ss_dssp             -----------------------------------------------------C------------CC------------
T ss_pred             -----------------------------------------------------c------------cc----------cc
Confidence                                                                 0            00          00


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                      ...++.+.+||++||+.||++|||++|+|+||||++
T Consensus       249 ~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          249 RPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             CcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            013467889999999999999999999999999986


No 91 
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=3.5e-43  Score=379.93  Aligned_cols=249  Identities=25%  Similarity=0.302  Sum_probs=202.2

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|+++++||+|+||+||+|++..+++.||||++...   .........|+..+..+.      .|+||++++++|...+
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~------~h~~iv~l~~~~~~~~  130 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVG------QHPCCVRLEQAWEEGG  130 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHC------CCTTBCCEEEEEEETT
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhc------CCCcEEEEEEEEEeCC
Confidence            7899999999999999999999999999999998753   233444555666665552      6899999999999999


Q ss_pred             eEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       186 ~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      .+||||||++++|.+++.... ..+++..++.++.||+.||+|||+++||||||||+|||++   .++.+||+|||++..
T Consensus       131 ~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~DFG~a~~  206 (311)
T 3p1a_A          131 ILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG---PRGRCKLGDFGLLVE  206 (311)
T ss_dssp             EEEEEEECCCCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---GGGCEEECCCTTCEE
T ss_pred             EEEEEEeccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEccceeeee
Confidence            999999999999999887664 5699999999999999999999999999999999999995   667899999999976


Q ss_pred             cCCc--ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhc
Q 003239          266 EDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN  343 (837)
Q Consensus       266 ~~~~--~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~  343 (837)
                      ....  .....||+.|+|||++.+ .++.++|||||||++|||++|..+|.+...   ...+.+  + ..+         
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~--~-~~~---------  270 (311)
T 3p1a_A          207 LGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQ--G-YLP---------  270 (311)
T ss_dssp             CC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTT--T-CCC---------
T ss_pred             cccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhc--c-CCC---------
Confidence            5432  234568999999999886 799999999999999999999776644221   111100  0 000         


Q ss_pred             chhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhH
Q 003239          344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR  423 (837)
Q Consensus       344 ~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s  423 (837)
                                                                             .+                 ....++
T Consensus       271 -------------------------------------------------------~~-----------------~~~~~~  278 (311)
T 3p1a_A          271 -------------------------------------------------------PE-----------------FTAGLS  278 (311)
T ss_dssp             -------------------------------------------------------HH-----------------HHTTSC
T ss_pred             -------------------------------------------------------cc-----------------cccCCC
Confidence                                                                   00                 011245


Q ss_pred             HHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       424 ~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                      +++.+||.+||+.||++|||++|+|+||||++
T Consensus       279 ~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          279 SELRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            77899999999999999999999999999986


No 92 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=5.2e-44  Score=382.47  Aligned_cols=250  Identities=25%  Similarity=0.455  Sum_probs=201.9

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh---------------------------hHHHHHHHHHHHHH
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA---------------------------YYQQALVEVSILTT  161 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~---------------------------~~~~~~~Ei~iL~~  161 (837)
                      ++|++.+.||+|+||+||+|++..+++.||||+++....                           ..+.+.+|+++|+.
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~   92 (298)
T 2zv2_A           13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK   92 (298)
T ss_dssp             TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred             cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence            799999999999999999999999999999999975421                           13457889999998


Q ss_pred             hhcccCCCCCCceeEEeEEEee--cceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeecc
Q 003239          162 LNKKYDREDKHHIVRIYEYFVC--QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCD  238 (837)
Q Consensus       162 L~~~~~~~~HpnIVkl~d~f~~--~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrD  238 (837)
                      +       .||||+++++++..  .+.+|+||||+.+ +|.+++.   ...+++..++.++.||+.||+|||++||+|||
T Consensus        93 l-------~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  162 (298)
T 2zv2_A           93 L-------DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRD  162 (298)
T ss_dssp             C-------CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             C-------CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            8       68999999999987  5689999999984 6655432   34699999999999999999999999999999


Q ss_pred             CCCCCeeeeccCCCCeEEEEecccccccCCc---ceeeccCccccCchhhcCCC---CCccchHHHHHHHHHHHHhCCCC
Q 003239          239 LKPENILLCTSVKPAEIKIIDFGSACTEDRT---VYSYIQSRYYRSPEVLLGYQ---YTTAIDMWSFGCIVAELFLGLPL  312 (837)
Q Consensus       239 LKPeNILl~~~~~~~~IKL~DFGlA~~~~~~---~~~~~GT~~Y~APEvl~~~~---yt~ksDIWSLG~ILyELltG~~P  312 (837)
                      |||+|||++   .++.+||+|||++......   .....||+.|+|||++.+..   ++.++|||||||++|+|++|+.|
T Consensus       163 lkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p  239 (298)
T 2zv2_A          163 IKPSNLLVG---EDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP  239 (298)
T ss_dssp             CCGGGEEEC---TTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred             CCHHHEEEC---CCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence            999999995   6689999999999754332   34457899999999998765   47889999999999999999999


Q ss_pred             CCCCCHHHHHHHHHHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCccc
Q 003239          313 FPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEY  392 (837)
Q Consensus       313 F~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~  392 (837)
                      |...........+.....                                                              
T Consensus       240 f~~~~~~~~~~~~~~~~~--------------------------------------------------------------  257 (298)
T 2zv2_A          240 FMDERIMCLHSKIKSQAL--------------------------------------------------------------  257 (298)
T ss_dssp             SCCSSHHHHHHHHHHCCC--------------------------------------------------------------
T ss_pred             CCCccHHHHHHHHhcccC--------------------------------------------------------------
Confidence            987765444333322000                                                              


Q ss_pred             ccccchHHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          393 FHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       393 f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                                 .+|.           ...+++.+.+||.+||+.||++|||++|+|+||||++
T Consensus       258 -----------~~~~-----------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          258 -----------EFPD-----------QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             -----------CCCS-----------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             -----------CCCC-----------ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence                       0000           0013467899999999999999999999999999963


No 93 
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=2.3e-43  Score=388.80  Aligned_cols=258  Identities=29%  Similarity=0.462  Sum_probs=200.1

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++.+.||+|+||+||+|++..+++.||||+++... ..+.+.+|+.+|+.+       .|+||+++++++...+..
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~~~~  123 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRL-------SHPNIIKLKEIFETPTEI  123 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHC-------CCTTBCCEEEEEECSSEE
T ss_pred             cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhC-------CCCCCcceeeeEecCCeE
Confidence            378999999999999999999999999999999998653 345677899999998       589999999999999999


Q ss_pred             EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      ++||||+. ++|.+++...  +.+++.+++.++.||+.||.|||++||+||||||+|||++..+.++.+||+|||++...
T Consensus       124 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~  201 (349)
T 2w4o_A          124 SLVLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV  201 (349)
T ss_dssp             EEEECCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred             EEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence            99999997 5898888654  45999999999999999999999999999999999999975455789999999999754


Q ss_pred             CCc--ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCchHHHHhhhc
Q 003239          267 DRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFD-LLRRMIRILGAQPPDYVLKEAKN  343 (837)
Q Consensus       267 ~~~--~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e-~l~~I~~~lG~~Pp~~~l~~~k~  343 (837)
                      ...  ....+||+.|+|||++.+..++.++|||||||++|||++|..||......+ .+..+..... .           
T Consensus       202 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~-~-----------  269 (349)
T 2w4o_A          202 EHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEY-Y-----------  269 (349)
T ss_dssp             -----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCC-C-----------
T ss_pred             CcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCC-c-----------
Confidence            432  345678999999999999999999999999999999999999997665433 2222221000 0           


Q ss_pred             chhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhH
Q 003239          344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR  423 (837)
Q Consensus       344 ~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s  423 (837)
                                                                       +..          +           .....+
T Consensus       270 -------------------------------------------------~~~----------~-----------~~~~~~  279 (349)
T 2w4o_A          270 -------------------------------------------------FIS----------P-----------WWDEVS  279 (349)
T ss_dssp             -------------------------------------------------CCT----------T-----------TTTTSC
T ss_pred             -------------------------------------------------cCC----------c-----------hhhhCC
Confidence                                                             000          0           001134


Q ss_pred             HHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       424 ~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      ..+.+||++||+.||++|||++|+|+||||++..
T Consensus       280 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          280 LNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            6789999999999999999999999999999754


No 94 
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=4.2e-43  Score=370.65  Aligned_cols=257  Identities=25%  Similarity=0.402  Sum_probs=217.2

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecce
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH  186 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~  186 (837)
                      .++|++.++||+|+||+||+|++..+++.||+|++... ....+.+.+|+++++.+       .|+||+++++++...+.
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~~~   80 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-------DHPNIIRLYETFEDNTD   80 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTC-------CCTTBCCEEEEEECSSE
T ss_pred             hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhC-------CCCCEeeEEEEEecCCe
Confidence            37899999999999999999999999999999999753 23456788999999988       68999999999999999


Q ss_pred             EEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       187 l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      .|+||||+. ++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||+..++..+.+||+|||++..
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~  158 (277)
T 3f3z_A           81 IYLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR  158 (277)
T ss_dssp             EEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence            999999997 4888888765  3599999999999999999999999999999999999996555778999999999975


Q ss_pred             cC--CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhc
Q 003239          266 ED--RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN  343 (837)
Q Consensus       266 ~~--~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~  343 (837)
                      ..  .......+|+.|+|||++.+ .++.++|||||||++|+|++|+.||...+..+....+.+... ..+..       
T Consensus       159 ~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~-------  229 (277)
T 3f3z_A          159 FKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTF-TFPEK-------  229 (277)
T ss_dssp             CCTTSCBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC-CCCHH-------
T ss_pred             ccCccchhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC-CCCch-------
Confidence            43  33345678999999999876 499999999999999999999999998877766665544211 00000       


Q ss_pred             chhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhH
Q 003239          344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR  423 (837)
Q Consensus       344 ~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s  423 (837)
                                                                                                .....+
T Consensus       230 --------------------------------------------------------------------------~~~~~~  235 (277)
T 3f3z_A          230 --------------------------------------------------------------------------DWLNVS  235 (277)
T ss_dssp             --------------------------------------------------------------------------HHTTSC
T ss_pred             --------------------------------------------------------------------------hhhcCC
Confidence                                                                                      001134


Q ss_pred             HHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       424 ~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      +.+.+||++||+.||++|||+.|+|+||||++.
T Consensus       236 ~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~  268 (277)
T 3f3z_A          236 PQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ  268 (277)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence            678999999999999999999999999999863


No 95 
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=1.6e-43  Score=394.89  Aligned_cols=255  Identities=22%  Similarity=0.403  Sum_probs=208.5

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh----hHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA----YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~----~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|+++++||+|+||+||+|+++.+++.||||++++...    ....+..|..++      .....||||++++++|..
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~l------l~~~~hp~Iv~l~~~~~~  110 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL------LKNVKHPFLVGLHFSFQT  110 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CC------BCCCCCTTBCCEEEEEEC
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHH------HHhCCCCCCCCEEEEEEe
Confidence            3789999999999999999999999999999999986432    122333343332      233489999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+||||||+. ++|.+++...  +.+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||+
T Consensus       111 ~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~ikL~DFG~  185 (373)
T 2r5t_A          111 ADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGL  185 (373)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCCB
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC---CCCCEEEeeCcc
Confidence            999999999998 4888888764  3699999999999999999999999999999999999995   678999999999


Q ss_pred             cccc---CCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHH
Q 003239          263 ACTE---DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       263 A~~~---~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      ++..   .......+||+.|+|||++.+..++.++|||||||++|||++|.+||.+.+..+....|....-         
T Consensus       186 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~---------  256 (373)
T 2r5t_A          186 CKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL---------  256 (373)
T ss_dssp             CGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCC---------
T ss_pred             ccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhccc---------
Confidence            9752   2334567899999999999999999999999999999999999999998877766665543100         


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                                      .+|             
T Consensus       257 ----------------------------------------------------------------~~~-------------  259 (373)
T 2r5t_A          257 ----------------------------------------------------------------QLK-------------  259 (373)
T ss_dssp             ----------------------------------------------------------------CCC-------------
T ss_pred             ----------------------------------------------------------------CCC-------------
Confidence                                                                            000             


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCCCH----HHHHcCccCCCCCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRWSP----FQASRHPFVTGEPFT  459 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRpTa----~EaL~HPff~~~~~~  459 (837)
                      ..++..+.+||++||+.||++|+++    +|+++||||++..|.
T Consensus       260 ~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~  303 (373)
T 2r5t_A          260 PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWD  303 (373)
T ss_dssp             SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHH
T ss_pred             CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHH
Confidence            0134678999999999999999997    699999999987653


No 96 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=1.8e-43  Score=396.28  Aligned_cols=254  Identities=24%  Similarity=0.415  Sum_probs=211.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|++++.||+|+||+||+|++..+++.||||++++..    ...+.+.+|+.+|+.+       .|||||+++++|..
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l-------~hp~Iv~l~~~~~~   86 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL-------EHPFLVNLWYSFQD   86 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-------CCTTBCCEEEEEEC
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhC-------CCCCCCcEEEEEEe
Confidence            379999999999999999999999999999999997532    3346778899999988       68999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+|+||||+. ++|.+++...  ..+++..++.++.||+.||.|||++|||||||||+||||+   .++.+||+|||+
T Consensus        87 ~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~vkL~DFG~  161 (384)
T 4fr4_A           87 EEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD---EHGHVHITDFNI  161 (384)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTT
T ss_pred             CCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEC---CCCCEEEeccce
Confidence            999999999997 5888888754  4699999999999999999999999999999999999995   678999999999


Q ss_pred             ccccC--CcceeeccCccccCchhhcC---CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCc
Q 003239          263 ACTED--RTVYSYIQSRYYRSPEVLLG---YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFD---LLRRMIRILGAQPP  334 (837)
Q Consensus       263 A~~~~--~~~~~~~GT~~Y~APEvl~~---~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e---~l~~I~~~lG~~Pp  334 (837)
                      +....  ......+||+.|+|||++..   ..|+.++|||||||++|||++|+.||.......   .+..+.....    
T Consensus       162 a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~----  237 (384)
T 4fr4_A          162 AAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV----  237 (384)
T ss_dssp             CEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCC----
T ss_pred             eeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhccc----
Confidence            97543  33456789999999999974   358999999999999999999999997543211   1111110000    


Q ss_pred             hHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchh
Q 003239          335 DYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSME  414 (837)
Q Consensus       335 ~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e  414 (837)
                                                                                           .+|        
T Consensus       238 ---------------------------------------------------------------------~~p--------  240 (384)
T 4fr4_A          238 ---------------------------------------------------------------------TYP--------  240 (384)
T ss_dssp             ---------------------------------------------------------------------CCC--------
T ss_pred             ---------------------------------------------------------------------CCC--------
Confidence                                                                                 000        


Q ss_pred             hhhhhHHhHHHHHHHHHHhcccCcCCCCC-HHHHHcCccCCCCCCC
Q 003239          415 DISKESQIRLALVDFLKGLVEFDPAKRWS-PFQASRHPFVTGEPFT  459 (837)
Q Consensus       415 ~l~~~~~~s~~l~DLL~kmL~~DP~kRpT-a~EaL~HPff~~~~~~  459 (837)
                           ..++..+.+||++||+.||++||+ ++++++||||++..+.
T Consensus       241 -----~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w~  281 (384)
T 4fr4_A          241 -----SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWD  281 (384)
T ss_dssp             -----TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCHH
T ss_pred             -----CcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCHH
Confidence                 113467899999999999999998 9999999999987653


No 97 
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=3.7e-43  Score=394.80  Aligned_cols=201  Identities=29%  Similarity=0.420  Sum_probs=168.0

Q ss_pred             cCCceEEE-EEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee--
Q 003239          107 TQRRYIVK-DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC--  183 (837)
Q Consensus       107 ~~~~Y~i~-~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~--  183 (837)
                      ..++|.+. ++||+|+||+||+|++..+++.||||+++..    ....+|+.++.++.      .|+||++++++|..  
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~------~hp~iv~l~~~~~~~~  128 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRAS------QCPHIVRIVDVYENLY  128 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHT------TSTTBCCEEEEEEEEE
T ss_pred             ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhc------CCCCcceEeEEEeecc
Confidence            34678887 7899999999999999999999999999854    34667888876653      68999999999886  


Q ss_pred             --cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEec
Q 003239          184 --QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF  260 (837)
Q Consensus       184 --~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DF  260 (837)
                        ..++|||||||. ++|.+++.......+++..++.|+.||+.||.|||++|||||||||+|||++....++.+||+||
T Consensus       129 ~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DF  208 (400)
T 1nxk_A          129 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDF  208 (400)
T ss_dssp             TTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred             cCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEec
Confidence              678999999997 59999988755456999999999999999999999999999999999999975444789999999


Q ss_pred             ccccccCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          261 GSACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       261 GlA~~~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                      |+++....  .....++|+.|+|||++.+..|+.++||||||||+|||++|..||.+..
T Consensus       209 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  267 (400)
T 1nxk_A          209 GFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH  267 (400)
T ss_dssp             TTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCT
T ss_pred             ccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence            99975442  2345688999999999999999999999999999999999999997654


No 98 
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=3.3e-43  Score=391.67  Aligned_cols=258  Identities=29%  Similarity=0.434  Sum_probs=211.6

Q ss_pred             CceEE--EEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIV--KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i--~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ..|++  .++||+|+||+||+|++..+++.||||+++... ...+.+.+|+++|+.+       .|+||+++++++...+
T Consensus        87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-------~hpnIv~~~~~~~~~~  159 (373)
T 2x4f_A           87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-------DHANLIQLYDAFESKN  159 (373)
T ss_dssp             GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEEECSS
T ss_pred             cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC-------CCCCCCeEEEEEEECC
Confidence            34554  678999999999999999999999999998643 4556788999999888       6899999999999999


Q ss_pred             eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .++|||||+. ++|.+.+.... ..+++..++.++.||+.||+|||+++|+||||||+|||+.. +..+.+||+|||++.
T Consensus       160 ~~~lv~E~~~~~~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~-~~~~~~kl~DFG~a~  237 (373)
T 2x4f_A          160 DIVLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLAR  237 (373)
T ss_dssp             EEEEEEECCTTCEEHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE-TTTTEEEECCCSSCE
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEec-CCCCcEEEEeCCCce
Confidence            9999999997 58888886543 35999999999999999999999999999999999999953 255789999999997


Q ss_pred             ccCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhh
Q 003239          265 TEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK  342 (837)
Q Consensus       265 ~~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k  342 (837)
                      ....  .....+||+.|+|||++.+..++.++||||||||+|||++|..||.+.+..+.+..+.......++.       
T Consensus       238 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~-------  310 (373)
T 2x4f_A          238 RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDE-------  310 (373)
T ss_dssp             ECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSG-------
T ss_pred             ecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChh-------
Confidence            5432  2344579999999999998899999999999999999999999999988877776665421100000       


Q ss_pred             cchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHh
Q 003239          343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI  422 (837)
Q Consensus       343 ~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~  422 (837)
                                                                                                 ....+
T Consensus       311 ---------------------------------------------------------------------------~~~~~  315 (373)
T 2x4f_A          311 ---------------------------------------------------------------------------EFQDI  315 (373)
T ss_dssp             ---------------------------------------------------------------------------GGTTS
T ss_pred             ---------------------------------------------------------------------------hhccC
Confidence                                                                                       00113


Q ss_pred             HHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       423 s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      ++++.+||.+||+.||++|||++|+|+||||++.+
T Consensus       316 ~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~  350 (373)
T 2x4f_A          316 SEEAKEFISKLLIKEKSWRISASEALKHPWLSDHK  350 (373)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHH
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCc
Confidence            46789999999999999999999999999999754


No 99 
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=7.1e-43  Score=403.22  Aligned_cols=258  Identities=27%  Similarity=0.446  Sum_probs=215.5

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--------------hhHHHHHHHHHHHHHhhcccCCCCCCc
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--------------AYYQQALVEVSILTTLNKKYDREDKHH  173 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~--------------~~~~~~~~Ei~iL~~L~~~~~~~~Hpn  173 (837)
                      .++|+++++||+|+||+||+|+++.+++.||||++++..              ...+.+.+|+.+|+.+       .|||
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpn  107 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL-------DHPN  107 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTC-------CCTT
T ss_pred             ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhC-------CCCC
Confidence            489999999999999999999999999999999998542              2346788899999998       6899


Q ss_pred             eeEEeEEEeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCC
Q 003239          174 IVRIYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKP  252 (837)
Q Consensus       174 IVkl~d~f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~  252 (837)
                      |+++++++...+.+|||||||. ++|.+.+...  ..+++..++.+++||+.||+|||++|||||||||+|||++.+...
T Consensus       108 iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~  185 (504)
T 3q5i_A          108 IIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSL  185 (504)
T ss_dssp             BCCEEEEEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCC
T ss_pred             CCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCC
Confidence            9999999999999999999997 4888888765  369999999999999999999999999999999999999754444


Q ss_pred             CeEEEEecccccccCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Q 003239          253 AEIKIIDFGSACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG  330 (837)
Q Consensus       253 ~~IKL~DFGlA~~~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG  330 (837)
                      ..+||+|||++.....  .....+||+.|+|||++.+ .++.++||||||||+|+|++|.+||.+.+..+.+..+.....
T Consensus       186 ~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  264 (504)
T 3q5i_A          186 LNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY  264 (504)
T ss_dssp             SSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             ccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence            5799999999975443  3445689999999999874 699999999999999999999999999888777766654111


Q ss_pred             CCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCC
Q 003239          331 AQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKN  410 (837)
Q Consensus       331 ~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~  410 (837)
                       ..+                                                                            
T Consensus       265 -~~~----------------------------------------------------------------------------  267 (504)
T 3q5i_A          265 -YFD----------------------------------------------------------------------------  267 (504)
T ss_dssp             -CCC----------------------------------------------------------------------------
T ss_pred             -CCC----------------------------------------------------------------------------
Confidence             000                                                                            


Q ss_pred             CchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          411 LSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       411 l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                           ......+++++.+||++||++||++|||++|+|+||||++..
T Consensus       268 -----~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          268 -----FNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             -----HHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             -----ccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence                 000112457789999999999999999999999999998743


No 100
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=2.3e-43  Score=422.04  Aligned_cols=256  Identities=25%  Similarity=0.389  Sum_probs=219.1

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|+++++||+|+||+||+|+++.+++.||||++++..    ...+....|..+|..+.      .|++|++++++|..
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~------~~~~i~~l~~~~~~  413 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG------KPPFLTQLHSCFQT  413 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTT------CCTTBCCEEEECBC
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhcc------CCCeEEEEEEEEEe
Confidence            478999999999999999999999999999999998532    23456677888877664      58999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+||||||+. ++|.+++...  +.+++..++.++.||+.||+|||++|||||||||+||||+   .++.+||+|||+
T Consensus       414 ~~~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~---~~g~ikL~DFGl  488 (674)
T 3pfq_A          414 MDRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGHIKIADFGM  488 (674)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEEC---SSSCEEECCCTT
T ss_pred             CCEEEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEc---CCCcEEEeecce
Confidence            999999999997 5888888765  3699999999999999999999999999999999999995   678999999999


Q ss_pred             cccc---CCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHH
Q 003239          263 ACTE---DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       263 A~~~---~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      ++..   .......+||+.|+|||++.+..|+.++||||||||||||++|++||.+.+..+++..|.+...         
T Consensus       489 a~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~---------  559 (674)
T 3pfq_A          489 CKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV---------  559 (674)
T ss_dssp             CEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCC---------
T ss_pred             eeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCC---------
Confidence            9752   2334567899999999999999999999999999999999999999999888777666543100         


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                                      .+|             
T Consensus       560 ----------------------------------------------------------------~~p-------------  562 (674)
T 3pfq_A          560 ----------------------------------------------------------------AYP-------------  562 (674)
T ss_dssp             ----------------------------------------------------------------CCC-------------
T ss_pred             ----------------------------------------------------------------CCC-------------
Confidence                                                                            000             


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCCCH-----HHHHcCccCCCCCCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRWSP-----FQASRHPFVTGEPFTC  460 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRpTa-----~EaL~HPff~~~~~~~  460 (837)
                      ..+++++.+||++||+.||++|+++     +||++||||++..|..
T Consensus       563 ~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~  608 (674)
T 3pfq_A          563 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEK  608 (674)
T ss_dssp             TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHH
T ss_pred             ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHH
Confidence            0134678999999999999999997     9999999999877643


No 101
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=1.9e-43  Score=385.35  Aligned_cols=199  Identities=31%  Similarity=0.488  Sum_probs=156.1

Q ss_pred             CceEEE---EEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVK---DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~---~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|++.   ++||+|+||+||+|++..+++.||||++.+.  ......+|+.+++.+.      .||||+++++++.+..
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~------~h~niv~~~~~~~~~~   79 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCE------GHPNIVKLHEVFHDQL   79 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTT------TCTTBCCEEEEEECSS
T ss_pred             hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhc------CCCCeeEEEEEEEcCC
Confidence            567775   7899999999999999999999999999854  3456778999999984      4899999999999999


Q ss_pred             eEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      ..||||||+.+ +|.+++...  ..+++.+++.++.||+.||+|||++||+||||||+|||++.+.....+||+|||++.
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~  157 (325)
T 3kn6_A           80 HTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR  157 (325)
T ss_dssp             EEEEEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCE
T ss_pred             EEEEEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccce
Confidence            99999999975 899988764  469999999999999999999999999999999999999754445589999999997


Q ss_pred             ccCC---cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          265 TEDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       265 ~~~~---~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                      ....   .....++|+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus       158 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~  213 (325)
T 3kn6_A          158 LKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD  213 (325)
T ss_dssp             ECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred             ecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCc
Confidence            5432   2345678999999999999999999999999999999999999997654


No 102
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=1.9e-43  Score=389.13  Aligned_cols=255  Identities=24%  Similarity=0.369  Sum_probs=208.1

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++.+.||+|+||+||+|+++.+++.||||++++...   ...+|++++.++.      .||||+++++++.+.+.+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~------~hp~iv~~~~~~~~~~~~   91 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYG------QHPNIITLKDVYDDGKYV   91 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHT------TSTTBCCEEEEEECSSEE
T ss_pred             cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhc------CCCCcCeEEEEEEcCCEE
Confidence            3789999999999999999999999999999999986542   2346888888874      589999999999999999


Q ss_pred             EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccC-CCCeEEEEecccccc
Q 003239          188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV-KPAEIKIIDFGSACT  265 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~-~~~~IKL~DFGlA~~  265 (837)
                      |||||||. ++|.+.+...  +.+++..++.++.||+.||+|||++|||||||||+|||+.... ....+||+|||++..
T Consensus        92 ~lv~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~  169 (342)
T 2qr7_A           92 YVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQ  169 (342)
T ss_dssp             EEEECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEE
T ss_pred             EEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCccc
Confidence            99999997 5898888754  3699999999999999999999999999999999999985322 234699999999975


Q ss_pred             cC---CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCC---CHHHHHHHHHHHhCCCCchHHHH
Q 003239          266 ED---RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA---SEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       266 ~~---~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~---s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      ..   ......++|+.|+|||++.+..|+.++|||||||++|||++|.+||.+.   ...+.+..+....-         
T Consensus       170 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~---------  240 (342)
T 2qr7_A          170 LRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKF---------  240 (342)
T ss_dssp             CBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCC---------
T ss_pred             CcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCc---------
Confidence            43   2234568899999999999888999999999999999999999999763   23333333222000         


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                     .....                          ..
T Consensus       241 -----------------------------------------------~~~~~--------------------------~~  247 (342)
T 2qr7_A          241 -----------------------------------------------SLSGG--------------------------YW  247 (342)
T ss_dssp             -----------------------------------------------CCCST--------------------------TT
T ss_pred             -----------------------------------------------ccCcc--------------------------cc
Confidence                                                           00000                          00


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                      ..+++++.+||++||..||++|||++|+|+||||.+
T Consensus       248 ~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHT
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecC
Confidence            124577899999999999999999999999999975


No 103
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=8e-43  Score=378.04  Aligned_cols=259  Identities=28%  Similarity=0.412  Sum_probs=216.1

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-------hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      .++|++.+.||+|+||.||+|++..+++.||||+++...       ...+.+.+|+.+++.+       .||||++++++
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~   83 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQV-------LHHNVITLHDV   83 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHC-------CCTTBCCEEEE
T ss_pred             hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhC-------CCCCcceEEEE
Confidence            378999999999999999999999999999999997532       1356788999999998       58999999999


Q ss_pred             EeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCC-CCeEEEE
Q 003239          181 FVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK-PAEIKII  258 (837)
Q Consensus       181 f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~-~~~IKL~  258 (837)
                      +...+.+++||||+. ++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++.+.. ...+||+
T Consensus        84 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~  161 (321)
T 2a2a_A           84 YENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLI  161 (321)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred             EecCCEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEc
Confidence            999999999999996 5899988754  46899999999999999999999999999999999999963211 1279999


Q ss_pred             ecccccccCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchH
Q 003239          259 DFGSACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY  336 (837)
Q Consensus       259 DFGlA~~~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~  336 (837)
                      |||++.....  ......+|+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+..... ..+. 
T Consensus       162 Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-~~~~-  239 (321)
T 2a2a_A          162 DFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY-DFDE-  239 (321)
T ss_dssp             CCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCC-CCCH-
T ss_pred             cCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc-ccCh-
Confidence            9999975543  23455789999999999999999999999999999999999999988877666655443111 0000 


Q ss_pred             HHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhh
Q 003239          337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI  416 (837)
Q Consensus       337 ~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l  416 (837)
                                                                                     ++.              
T Consensus       240 ---------------------------------------------------------------~~~--------------  242 (321)
T 2a2a_A          240 ---------------------------------------------------------------EFF--------------  242 (321)
T ss_dssp             ---------------------------------------------------------------HHH--------------
T ss_pred             ---------------------------------------------------------------hhh--------------
Confidence                                                                           000              


Q ss_pred             hhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       417 ~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                         ...++.+.+||++||..||++|||++|+|+||||+...
T Consensus       243 ---~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          243 ---SHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             ---TTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             ---cccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence               11346789999999999999999999999999998643


No 104
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=8.3e-43  Score=375.90  Aligned_cols=195  Identities=25%  Similarity=0.375  Sum_probs=166.5

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc-
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR-  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~-  185 (837)
                      ++|+++++||+|+||+||+|++..+++.||||+++..  ....+.+.+|+++|+.+       .||||++++++|.+.. 
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~~~~~~   78 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKL-------EHPGIVRYFNAWLETPP   78 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSC-------CCTTBCCEEEEEEECCS
T ss_pred             hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhC-------CCCCEeeEEEEEEEecc
Confidence            6899999999999999999999999999999999843  34567788999999988       6899999999986543 


Q ss_pred             --------------------------------------------------------eEEEEEeccch-hHHHHHHhhcc-
Q 003239          186 --------------------------------------------------------HLCICFELLDS-NLYELIKINHF-  207 (837)
Q Consensus       186 --------------------------------------------------------~l~LVmEy~~g-sL~d~l~~~~~-  207 (837)
                                                                              .+++|||||.+ +|.+++..... 
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~  158 (332)
T 3qd2_B           79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL  158 (332)
T ss_dssp             CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG
T ss_pred             chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc
Confidence                                                                    38999999985 88888876432 


Q ss_pred             CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccccCCc---------------cee
Q 003239          208 RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT---------------VYS  272 (837)
Q Consensus       208 ~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~~~~---------------~~~  272 (837)
                      ...++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++......               ...
T Consensus       159 ~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~  235 (332)
T 3qd2_B          159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTG  235 (332)
T ss_dssp             GGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEECSCC--------------CCCS
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEe---CCCCEEEeecCcccccccchhhccccccccccccccc
Confidence            2366778999999999999999999999999999999995   6679999999999754432               233


Q ss_pred             eccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCC
Q 003239          273 YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF  313 (837)
Q Consensus       273 ~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF  313 (837)
                      .+||+.|+|||++.+..++.++|||||||++|||++|..|+
T Consensus       236 ~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~  276 (332)
T 3qd2_B          236 QVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQ  276 (332)
T ss_dssp             CC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCH
T ss_pred             cCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCCh
Confidence            47899999999999999999999999999999999987654


No 105
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=5.4e-43  Score=402.13  Aligned_cols=258  Identities=32%  Similarity=0.506  Sum_probs=218.2

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|+++++||+|+||+||+|++..+++.||||++++.   ......+.+|+++|+.+       .||||+++++++...
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~~~~   93 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-------DHPNIMKLFEILEDS   93 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHC-------CCTTBCCEEEEEECS
T ss_pred             hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhC-------CCCCcCeEEEEEEcC
Confidence            37999999999999999999999999999999999742   23456788999999999       689999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +.+|+|||||. ++|.+.+...  ..+++..++.++.||+.||.|||++|||||||||+|||++.....+.+||+|||++
T Consensus        94 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  171 (486)
T 3mwu_A           94 SSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (486)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred             CEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence            99999999997 5888888665  36999999999999999999999999999999999999976556778999999999


Q ss_pred             cccCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          264 CTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       264 ~~~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      .....  .....+||+.|+|||++.+ .|+.++||||||||+|+|++|.+||.+.+..+.+..+.......+        
T Consensus       172 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--------  242 (486)
T 3mwu_A          172 TCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD--------  242 (486)
T ss_dssp             TTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSC--------
T ss_pred             eECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC--------
Confidence            75432  3345689999999999976 599999999999999999999999999888777666544111000        


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                                                ......
T Consensus       243 --------------------------------------------------------------------------~~~~~~  248 (486)
T 3mwu_A          243 --------------------------------------------------------------------------LPQWRT  248 (486)
T ss_dssp             --------------------------------------------------------------------------SGGGGG
T ss_pred             --------------------------------------------------------------------------CcccCC
Confidence                                                                                      000112


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      +++.+.+||++||+.||++|||+.|+|+||||++..
T Consensus       249 ~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~  284 (486)
T 3mwu_A          249 ISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (486)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence            457789999999999999999999999999998754


No 106
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=4.3e-43  Score=404.01  Aligned_cols=255  Identities=30%  Similarity=0.514  Sum_probs=212.8

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|+++++||+|+||+||+|++..+++.||||++++..   .....+.+|+.+|+.+       .||||++++++|...+
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~~~~~  109 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL-------DHPNIMKLYDFFEDKR  109 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTC-------CCTTBCCEEEEEECSS
T ss_pred             cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhC-------CCCCCCeEEEEEEeCC
Confidence            68999999999999999999999999999999998542   2346778899999888       6899999999999999


Q ss_pred             eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .+|||||||. ++|.+.+...  ..+++..++.+++||+.||.|||++|||||||||+|||++.....+.+||+|||++.
T Consensus       110 ~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~  187 (494)
T 3lij_A          110 NYYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA  187 (494)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             EEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence            9999999997 5888887665  369999999999999999999999999999999999999755556789999999996


Q ss_pred             ccC--CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhh
Q 003239          265 TED--RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAK  342 (837)
Q Consensus       265 ~~~--~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k  342 (837)
                      ...  ......+||+.|+|||++. ..|+.++|||||||++|+|++|.+||.+.+..+.+..+.......+.        
T Consensus       188 ~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~--------  258 (494)
T 3lij_A          188 VFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDS--------  258 (494)
T ss_dssp             ECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCS--------
T ss_pred             ECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc--------
Confidence            543  2334568999999999986 47999999999999999999999999998887776666542110000        


Q ss_pred             cchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHh
Q 003239          343 NTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQI  422 (837)
Q Consensus       343 ~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~  422 (837)
                                                                           .                     ....+
T Consensus       259 -----------------------------------------------------~---------------------~~~~~  264 (494)
T 3lij_A          259 -----------------------------------------------------P---------------------EWKNV  264 (494)
T ss_dssp             -----------------------------------------------------G---------------------GGTTS
T ss_pred             -----------------------------------------------------h---------------------hcccC
Confidence                                                                 0                     00123


Q ss_pred             HHHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          423 RLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       423 s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                      ++.+.+||++||++||++|||++|||+||||++
T Consensus       265 s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          265 SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHH
T ss_pred             CHHHHHHHHHHCCCChhhCccHHHHhcCccccc
Confidence            467899999999999999999999999999986


No 107
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=8.6e-43  Score=379.23  Aligned_cols=253  Identities=25%  Similarity=0.431  Sum_probs=212.5

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      ..|+..++||+|+||+||+|++..+++.||||+++... ...+.+.+|+.+++.+       .|+||+++++++...+..
T Consensus        45 ~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~~~~  117 (321)
T 2c30_A           45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-------QHFNVVEMYKSYLVGEEL  117 (321)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTC-------CCTTBCCEEEEEEETTEE
T ss_pred             hhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhC-------CCCCcceEEEEEEECCEE
Confidence            46888899999999999999999999999999998542 3456788899999888       689999999999999999


Q ss_pred             EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      ++||||+. ++|.+++..   ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++...
T Consensus       118 ~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~~~~  191 (321)
T 2c30_A          118 WVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT---LDGRVKLSDFGFCAQI  191 (321)
T ss_dssp             EEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEEC
T ss_pred             EEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCcEEEeeeeeeeec
Confidence            99999997 478777654   3599999999999999999999999999999999999995   6688999999998754


Q ss_pred             CCc---ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhc
Q 003239          267 DRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN  343 (837)
Q Consensus       267 ~~~---~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~  343 (837)
                      ...   ....+||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+.+..+....   ++.        
T Consensus       192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~---~~~--------  260 (321)
T 2c30_A          192 SKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP---PPK--------  260 (321)
T ss_dssp             CSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS---CCC--------
T ss_pred             ccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCC---CCC--------
Confidence            432   345689999999999999999999999999999999999999998877665554443210   000        


Q ss_pred             chhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhH
Q 003239          344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR  423 (837)
Q Consensus       344 ~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s  423 (837)
                                                                                              +......+
T Consensus       261 ------------------------------------------------------------------------~~~~~~~~  268 (321)
T 2c30_A          261 ------------------------------------------------------------------------LKNSHKVS  268 (321)
T ss_dssp             ------------------------------------------------------------------------CTTGGGSC
T ss_pred             ------------------------------------------------------------------------cCccccCC
Confidence                                                                                    00001234


Q ss_pred             HHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       424 ~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      +.+.+||.+||+.||++|||++|+|+||||.+..
T Consensus       269 ~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          269 PVLRDFLERMLVRDPQERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence            6789999999999999999999999999998754


No 108
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=1.9e-44  Score=400.48  Aligned_cols=199  Identities=18%  Similarity=0.203  Sum_probs=170.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC----ChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEe-----
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIY-----  178 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~----~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~-----  178 (837)
                      .++|++.+.||+|+||+||+|++..+++.||||+++.    .....+.+.+|+.+++.+...    .|||||+++     
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l----~hpniv~~~~~~~~  147 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGI----KNQKQAKVHLRFIF  147 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTC----CSHHHHHHHHCBCC
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhcccc----CCHHHHHHHhhhhh
Confidence            4789999999999999999999999999999999973    334567788999887777543    799999998     


Q ss_pred             --EEEeecc-----------------eEEEEEeccchhHHHHHHhhccCCCC-------HHHHHHHHHhHHHHHhhhhcC
Q 003239          179 --EYFVCQR-----------------HLCICFELLDSNLYELIKINHFRGLS-------LSIVQLFSKQILRGLSLLKDA  232 (837)
Q Consensus       179 --d~f~~~~-----------------~l~LVmEy~~gsL~d~l~~~~~~~L~-------e~~i~~I~~QIl~aL~yLHs~  232 (837)
                        +++...+                 ..||||||++|+|.+++....  .++       +..++.|+.||+.||+|||++
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~--~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  225 (377)
T 3byv_A          148 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL--SHSSTHKSLVHHARLQLTLQVIRLLASLHHY  225 (377)
T ss_dssp             CSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHH--HTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhcc--ccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence              7776653                 389999999999999998653  244       478888999999999999999


Q ss_pred             CeeeccCCCCCeeeeccCCCCeEEEEecccccccCCcceeeccCccccCchhhcCC-----------CCCccchHHHHHH
Q 003239          233 GIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGY-----------QYTTAIDMWSFGC  301 (837)
Q Consensus       233 gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~~-----------~yt~ksDIWSLG~  301 (837)
                      |||||||||+||||+   .++.+||+|||+++.........+| +.|+|||++.+.           .++.++|||||||
T Consensus       226 ~ivHrDikp~NIll~---~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~  301 (377)
T 3byv_A          226 GLVHTYLRPVDIVLD---QRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL  301 (377)
T ss_dssp             TEECSCCCGGGEEEC---TTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred             CeecCCCCHHHEEEc---CCCCEEEEechhheecCCcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence            999999999999996   6689999999999887776677788 999999999987           8999999999999


Q ss_pred             HHHHHHhCCCCCCCC
Q 003239          302 IVAELFLGLPLFPGA  316 (837)
Q Consensus       302 ILyELltG~~PF~g~  316 (837)
                      ++|||++|+.||.+.
T Consensus       302 il~elltg~~Pf~~~  316 (377)
T 3byv_A          302 VIYWIWCADLPITKD  316 (377)
T ss_dssp             HHHHHHHSSCCC---
T ss_pred             HHHHHHHCCCCCccc
Confidence            999999999999554


No 109
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=7.5e-43  Score=369.58  Aligned_cols=252  Identities=23%  Similarity=0.413  Sum_probs=211.4

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|++.+.||+|+||+||+|++..+++.||||++....    .....+.+|+.+++.+       .||||+++++++..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~   80 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL-------RHPNILRLYGYFHD   80 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC-------CCTTBCCEEEEEEC
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC-------CCCCCcchhheEec
Confidence            378999999999999999999999999999999997532    2245677888888887       68999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+..++||||+. ++|.+.+...  ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||+
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l~Dfg~  155 (279)
T 3fdn_A           81 ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGW  155 (279)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEEC---TTSCEEECSCCE
T ss_pred             CCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEc---CCCCEEEEeccc
Confidence            999999999998 5888888765  3699999999999999999999999999999999999995   678899999999


Q ss_pred             ccccCC-cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          263 ACTEDR-TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       263 A~~~~~-~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      +..... ......+++.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+..... .         
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~---------  225 (279)
T 3fdn_A          156 SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEF-T---------  225 (279)
T ss_dssp             ESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC-C---------
T ss_pred             cccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCC-C---------
Confidence            865433 23456789999999999999999999999999999999999999988776665554433111 0         


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                                     +|             ..
T Consensus       226 ---------------------------------------------------------------~~-------------~~  229 (279)
T 3fdn_A          226 ---------------------------------------------------------------FP-------------DF  229 (279)
T ss_dssp             ---------------------------------------------------------------CC-------------TT
T ss_pred             ---------------------------------------------------------------CC-------------Cc
Confidence                                                                           00             01


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      .++.+.+||.+||+.||++|||++|+|+||||+...
T Consensus       230 ~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~  265 (279)
T 3fdn_A          230 VTEGARDLISRLLKHNPSQRPMLREVLEHPWITANS  265 (279)
T ss_dssp             SCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHC
T ss_pred             CCHHHHHHHHHHhccChhhCCCHHHHhhCccccCCc
Confidence            336788999999999999999999999999999755


No 110
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=3.9e-43  Score=382.54  Aligned_cols=260  Identities=25%  Similarity=0.462  Sum_probs=210.6

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC------hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ------PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      .++|++.++||+|+||+||+|++..+++.||||+++..      ....+.+.+|+.+++.+       .||||+++++++
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~   97 (345)
T 3hko_A           25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL-------HHPNIARLYEVY   97 (345)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHC-------CCTTBCCEEEEE
T ss_pred             hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhC-------CCCCcceeehhh
Confidence            37999999999999999999999999999999999743      24456788999999999       589999999999


Q ss_pred             eecceEEEEEeccc-hhHHHHHHhhc--------------------------------------cCCCCHHHHHHHHHhH
Q 003239          182 VCQRHLCICFELLD-SNLYELIKINH--------------------------------------FRGLSLSIVQLFSKQI  222 (837)
Q Consensus       182 ~~~~~l~LVmEy~~-gsL~d~l~~~~--------------------------------------~~~L~e~~i~~I~~QI  222 (837)
                      .+.+..|||||||. ++|.+++....                                      ...+++..++.++.||
T Consensus        98 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi  177 (345)
T 3hko_A           98 EDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQI  177 (345)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHH
T ss_pred             ccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence            99999999999996 68888774210                                      0124678899999999


Q ss_pred             HHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccccCC-------cceeeccCccccCchhhcC--CCCCcc
Q 003239          223 LRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDR-------TVYSYIQSRYYRSPEVLLG--YQYTTA  293 (837)
Q Consensus       223 l~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~~~-------~~~~~~GT~~Y~APEvl~~--~~yt~k  293 (837)
                      +.||+|||+++|+||||||+|||++.+ ....+||+|||++.....       ......+|+.|+|||++.+  ..++.+
T Consensus       178 ~~~l~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  256 (345)
T 3hko_A          178 FSALHYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK  256 (345)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEESCS-SSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred             HHHHHHHHHCCccccCCChhhEEEecC-CCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence            999999999999999999999999622 234899999999964321       2345678999999999975  578999


Q ss_pred             chHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhh
Q 003239          294 IDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQAL  373 (837)
Q Consensus       294 sDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~  373 (837)
                      +|||||||++|||++|+.||.+.+..+.+..+.......+                                        
T Consensus       257 ~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~----------------------------------------  296 (345)
T 3hko_A          257 CDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFE----------------------------------------  296 (345)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTT----------------------------------------
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccC----------------------------------------
Confidence            9999999999999999999998887776665544111000                                        


Q ss_pred             hHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccC
Q 003239          374 TEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFV  453 (837)
Q Consensus       374 s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff  453 (837)
                                           .                     .....+++.+.+||.+||+.||++|||++|+|+||||
T Consensus       297 ---------------------~---------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~  334 (345)
T 3hko_A          297 ---------------------N---------------------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWI  334 (345)
T ss_dssp             ---------------------S---------------------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHH
T ss_pred             ---------------------C---------------------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhh
Confidence                                 0                     0001234678999999999999999999999999999


Q ss_pred             CCCC
Q 003239          454 TGEP  457 (837)
Q Consensus       454 ~~~~  457 (837)
                      ++..
T Consensus       335 ~~~~  338 (345)
T 3hko_A          335 SQFS  338 (345)
T ss_dssp             HTTS
T ss_pred             ccCh
Confidence            9854


No 111
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=1.3e-42  Score=383.19  Aligned_cols=254  Identities=24%  Similarity=0.386  Sum_probs=215.3

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|++++.||+|+||+||+|++..+++.||||+++..    ....+.+.+|+++|+.+       .||||+++++++..
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~~~  125 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-------RHPNTIQYRGCYLR  125 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEEEE
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhC-------CCCCEeeEEEEEEE
Confidence            36799999999999999999999999999999999743    23446788999999998       68999999999999


Q ss_pred             cceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          184 QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       184 ~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      .+..+|||||+.|+|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++   .++.+||+|||++
T Consensus       126 ~~~~~lv~e~~~g~l~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a  201 (348)
T 1u5q_A          126 EHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSA  201 (348)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTC
T ss_pred             CCeEEEEEecCCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEeeccCc
Confidence            99999999999999998886543 5699999999999999999999999999999999999996   6789999999999


Q ss_pred             cccCCcceeeccCccccCchhhc---CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHh
Q 003239          264 CTEDRTVYSYIQSRYYRSPEVLL---GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE  340 (837)
Q Consensus       264 ~~~~~~~~~~~GT~~Y~APEvl~---~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~  340 (837)
                      ..... ....+||+.|+|||++.   ...++.++||||||||+|||++|++||...+..+.+..+.....  +.      
T Consensus       202 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~--~~------  272 (348)
T 1u5q_A          202 SIMAP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--PA------  272 (348)
T ss_dssp             BSSSS-BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC--CC------
T ss_pred             eecCC-CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CC------
Confidence            76543 34568999999999995   45789999999999999999999999988776655544433100  00      


Q ss_pred             hhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhH
Q 003239          341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES  420 (837)
Q Consensus       341 ~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~  420 (837)
                                                                     .                             ...
T Consensus       273 -----------------------------------------------~-----------------------------~~~  276 (348)
T 1u5q_A          273 -----------------------------------------------L-----------------------------QSG  276 (348)
T ss_dssp             -----------------------------------------------C-----------------------------CCT
T ss_pred             -----------------------------------------------C-----------------------------CCC
Confidence                                                           0                             000


Q ss_pred             HhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       421 ~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      .+++.+.+||.+||+.||++|||++|+|+||||....
T Consensus       277 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          277 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  313 (348)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             CCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence            1346789999999999999999999999999998754


No 112
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=3.7e-43  Score=402.74  Aligned_cols=257  Identities=30%  Similarity=0.512  Sum_probs=219.1

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ++|++.++||+|+||+||+|++..+++.||||++.+.    ....+.+.+|+.+|+++       .||||+++++++...
T Consensus        26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~~~~   98 (484)
T 3nyv_A           26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL-------DHPNIMKLYEFFEDK   98 (484)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTC-------CCTTBCCEEEEEECS
T ss_pred             CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhC-------CCCCCCcEEEEEEeC
Confidence            7999999999999999999999999999999999743    33467788999999888       689999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +.+|+|||||. ++|.+.+...  ..+++..++.++.||+.||.|||++|||||||||+|||++.....+.+||+|||++
T Consensus        99 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  176 (484)
T 3nyv_A           99 GYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS  176 (484)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred             CEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence            99999999997 5888888654  46999999999999999999999999999999999999975556789999999999


Q ss_pred             cccC--CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          264 CTED--RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       264 ~~~~--~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ....  ......+||+.|+|||++.+ .|+.++||||||||+|+|++|.+||.+.+..+.+..+.+.....+        
T Consensus       177 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~--------  247 (484)
T 3nyv_A          177 THFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE--------  247 (484)
T ss_dssp             HHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--------
T ss_pred             EEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC--------
Confidence            7543  23345689999999999977 799999999999999999999999999888777766654111000        


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                                                ......
T Consensus       248 --------------------------------------------------------------------------~~~~~~  253 (484)
T 3nyv_A          248 --------------------------------------------------------------------------LPQWKK  253 (484)
T ss_dssp             --------------------------------------------------------------------------SGGGGG
T ss_pred             --------------------------------------------------------------------------Cccccc
Confidence                                                                                      000112


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      +++.+.+||++||++||++|||++|+|+||||+...
T Consensus       254 ~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          254 VSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence            457789999999999999999999999999998643


No 113
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=1.1e-42  Score=373.36  Aligned_cols=259  Identities=27%  Similarity=0.437  Sum_probs=216.3

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecce
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH  186 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~  186 (837)
                      .++|++.+.||+|+||+||+|++..+++.||||+++... ...+.+.+|+.+++.+       .||||+++++++...+.
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~   80 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI-------KHENIVTLEDIYESTTH   80 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHC-------CCTTBCCEEEEEECSSE
T ss_pred             hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhC-------CCCCeeehhhhcccCCE
Confidence            479999999999999999999999999999999998653 2345678899999998       68999999999999999


Q ss_pred             EEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       187 l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      .|+||||+. ++|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||+...+..+.+||+|||++..
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~  158 (304)
T 2jam_A           81 YYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM  158 (304)
T ss_dssp             EEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred             EEEEEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence            999999997 5898888765  3699999999999999999999999999999999999996545778999999999975


Q ss_pred             cCCc-ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhcc
Q 003239          266 EDRT-VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKNT  344 (837)
Q Consensus       266 ~~~~-~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~~  344 (837)
                      .... ....++++.|+|||++.+..++.++|||||||++|+|++|..||......+.+..+.+.....+           
T Consensus       159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~-----------  227 (304)
T 2jam_A          159 EQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFE-----------  227 (304)
T ss_dssp             CCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCC-----------
T ss_pred             cCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC-----------
Confidence            4432 3345789999999999999999999999999999999999999988877666555443111000           


Q ss_pred             hhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhHH
Q 003239          345 SKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIRL  424 (837)
Q Consensus       345 ~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s~  424 (837)
                                                                        .          +           ....+++
T Consensus       228 --------------------------------------------------~----------~-----------~~~~~~~  236 (304)
T 2jam_A          228 --------------------------------------------------S----------P-----------FWDDISE  236 (304)
T ss_dssp             --------------------------------------------------T----------T-----------TTTTSCH
T ss_pred             --------------------------------------------------c----------c-----------ccccCCH
Confidence                                                              0          0           0011346


Q ss_pred             HHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          425 ALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       425 ~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      .+.+||.+||..||++|||++|+|+||||++..
T Consensus       237 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          237 SAKDFICHLLEKDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             HHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence            789999999999999999999999999998753


No 114
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=8.6e-43  Score=372.88  Aligned_cols=254  Identities=25%  Similarity=0.419  Sum_probs=210.5

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe-
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV-  182 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~-  182 (837)
                      ++|++.+.||+|+||.||+|++..+++.||||+++...     ...+.+.+|+++++.+       .|+||+++++++. 
T Consensus         5 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~   77 (305)
T 2wtk_C            5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL-------RHKNVIQLVDVLYN   77 (305)
T ss_dssp             CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC-------CCTTBCCEEEEEEC
T ss_pred             cceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc-------CCCCeeEEEEEEEc
Confidence            78999999999999999999999999999999997532     3456788899998888       6899999999984 


Q ss_pred             -ecceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 -CQRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 -~~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                       .....|+||||+.++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~---~~~~~kl~dfg  154 (305)
T 2wtk_C           78 EEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT---TGGTLKISALG  154 (305)
T ss_dssp             C---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCT
T ss_pred             CCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---CCCcEEeeccc
Confidence             45689999999998888888876666799999999999999999999999999999999999995   66889999999


Q ss_pred             cccccC-----CcceeeccCccccCchhhcCCC--CCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCc
Q 003239          262 SACTED-----RTVYSYIQSRYYRSPEVLLGYQ--YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPP  334 (837)
Q Consensus       262 lA~~~~-----~~~~~~~GT~~Y~APEvl~~~~--yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp  334 (837)
                      ++....     .......+|+.|+|||++.+..  ++.++|||||||++|+|++|+.||.+.+..+....+....-    
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~----  230 (305)
T 2wtk_C          155 VAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY----  230 (305)
T ss_dssp             TCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC----
T ss_pred             cccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCC----
Confidence            997543     2223456899999999998754  47899999999999999999999988766555444322000    


Q ss_pred             hHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchh
Q 003239          335 DYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSME  414 (837)
Q Consensus       335 ~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e  414 (837)
                                                                                             +..      
T Consensus       231 -----------------------------------------------------------------------~~~------  233 (305)
T 2wtk_C          231 -----------------------------------------------------------------------AIP------  233 (305)
T ss_dssp             -----------------------------------------------------------------------CCC------
T ss_pred             -----------------------------------------------------------------------CCC------
Confidence                                                                                   000      


Q ss_pred             hhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          415 DISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       415 ~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                           ...++.+.+||++||..||++|||++|+|+||||++...
T Consensus       234 -----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          234 -----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             -----SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             -----CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence                 013367889999999999999999999999999998653


No 115
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.1e-42  Score=381.06  Aligned_cols=197  Identities=24%  Similarity=0.422  Sum_probs=169.0

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|+++++||+|+||+||+|.+ .+++.||||+++..   ....+.+.+|+.+|+.+.+     .|+||+++++++...
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~~~iv~~~~~~~~~   81 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-----HSDKIIRLYDYEITD   81 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT-----TCTTBCCEEEEEECS
T ss_pred             cCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhh-----cCCceEEEeeeEeeC
Confidence            37899999999999999999987 46889999999753   3445678899999999964     358999999999999


Q ss_pred             ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          185 RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       185 ~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      +.+|||||+.+++|.+++...  +.+++.+++.++.||+.||+|||+++||||||||+|||++    ++.+||+|||++.
T Consensus        82 ~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~----~~~~kl~DFG~a~  155 (343)
T 3dbq_A           82 QYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIAN  155 (343)
T ss_dssp             SEEEEEECCCSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSC
T ss_pred             CEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE----CCcEEEeeccccc
Confidence            999999998888999998764  4699999999999999999999999999999999999995    4679999999997


Q ss_pred             ccCCc-----ceeeccCccccCchhhcC-----------CCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          265 TEDRT-----VYSYIQSRYYRSPEVLLG-----------YQYTTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       265 ~~~~~-----~~~~~GT~~Y~APEvl~~-----------~~yt~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                      .....     ....+||+.|+|||++.+           ..++.++|||||||++|||++|+.||...
T Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  223 (343)
T 3dbq_A          156 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI  223 (343)
T ss_dssp             CC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhh
Confidence            54322     234579999999999975           57899999999999999999999999754


No 116
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=2.5e-42  Score=363.82  Aligned_cols=254  Identities=22%  Similarity=0.299  Sum_probs=204.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|+++++||+|+||+||+|++..+++.||||+++..   ......+.+|+.++..+.      .||||+++++++...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~------~h~~iv~~~~~~~~~   83 (289)
T 1x8b_A           10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG------QHSHVVRYFSAWAED   83 (289)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSC------SCTTBCCEEEEEEET
T ss_pred             cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhC------CCCCeeeeeeeeecC
Confidence            37899999999999999999999999999999999853   344567788888888873      589999999999999


Q ss_pred             ceEEEEEeccch-hHHHHHHhhcc--CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccC-----------
Q 003239          185 RHLCICFELLDS-NLYELIKINHF--RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV-----------  250 (837)
Q Consensus       185 ~~l~LVmEy~~g-sL~d~l~~~~~--~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~-----------  250 (837)
                      +..+|||||+.+ +|.+++.....  ..+++..++.++.||+.||+|||++||+||||||+|||++.+.           
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~  163 (289)
T 1x8b_A           84 DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDE  163 (289)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------
T ss_pred             CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence            999999999975 99999876532  5699999999999999999999999999999999999996432           


Q ss_pred             -----CCCeEEEEecccccccCCcceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 003239          251 -----KPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRR  324 (837)
Q Consensus       251 -----~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~  324 (837)
                           ....+||+|||++...... ....+|+.|+|||++.+. .++.++|||||||++|+|++|.+++.....   ...
T Consensus       164 ~~~~~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~  239 (289)
T 1x8b_A          164 DDWASNKVMFKIGDLGHVTRISSP-QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ---WHE  239 (289)
T ss_dssp             ------CCCEEECCCTTCEETTCS-CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH---HHH
T ss_pred             ccccCCceEEEEcccccccccCCc-cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH---HHH
Confidence                 4557999999999766543 234689999999999876 677899999999999999999987744321   111


Q ss_pred             HHHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhc
Q 003239          325 MIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTN  404 (837)
Q Consensus       325 I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~  404 (837)
                      +.+  + ..                                                    +                 .
T Consensus       240 ~~~--~-~~----------------------------------------------------~-----------------~  247 (289)
T 1x8b_A          240 IRQ--G-RL----------------------------------------------------P-----------------R  247 (289)
T ss_dssp             HHT--T-CC----------------------------------------------------C-----------------C
T ss_pred             HHc--C-CC----------------------------------------------------C-----------------C
Confidence            111  0 00                                                    0                 0


Q ss_pred             CCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          405 YPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       405 ~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      .|             ..+++.+.+||++||+.||++|||++|+|+||||++.
T Consensus       248 ~~-------------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          248 IP-------------QVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             CS-------------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred             CC-------------cccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence            00             0134678999999999999999999999999999874


No 117
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=1.8e-42  Score=367.15  Aligned_cols=255  Identities=23%  Similarity=0.337  Sum_probs=192.4

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh--hHHHHHHHHHH-HHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA--YYQQALVEVSI-LTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~--~~~~~~~Ei~i-L~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|+++++||+|+||+||+|++..+++.||||+++....  .......|..+ ++.       ..||||+++++++...
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~-------~~h~~iv~~~~~~~~~   78 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT-------VDCPFTVTFYGALFRE   78 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTT-------CCCTTBCCEEEEEECS
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHh-------CCCCeEEEEeeeeecc
Confidence            3799999999999999999999999999999999985422  22222233322 222       3799999999999999


Q ss_pred             ceEEEEEeccchhHHHHHHhh--ccCCCCHHHHHHHHHhHHHHHhhhhcC-CeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          185 RHLCICFELLDSNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDA-GIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       185 ~~l~LVmEy~~gsL~d~l~~~--~~~~L~e~~i~~I~~QIl~aL~yLHs~-gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      +..++||||++++|.+++...  ....+++..++.++.||+.||+|||++ ||+||||||+|||++   ..+.+||+|||
T Consensus        79 ~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg  155 (290)
T 3fme_A           79 GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN---ALGQVKMCDFG  155 (290)
T ss_dssp             SSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEEC---TTCCEEBCCC-
T ss_pred             CCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCCEEEeecC
Confidence            999999999999988877652  235699999999999999999999998 999999999999995   66799999999


Q ss_pred             cccccCCc--ceeeccCccccCchhh----cCCCCCccchHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhCCCCc
Q 003239          262 SACTEDRT--VYSYIQSRYYRSPEVL----LGYQYTTAIDMWSFGCIVAELFLGLPLFPGA-SEFDLLRRMIRILGAQPP  334 (837)
Q Consensus       262 lA~~~~~~--~~~~~GT~~Y~APEvl----~~~~yt~ksDIWSLG~ILyELltG~~PF~g~-s~~e~l~~I~~~lG~~Pp  334 (837)
                      ++......  .....+|+.|+|||++    .+..++.++|||||||++|+|++|+.||... .....+..+.....    
T Consensus       156 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----  231 (290)
T 3fme_A          156 ISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS----  231 (290)
T ss_dssp             --------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC----
T ss_pred             CcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC----
Confidence            99754332  2334789999999997    4557899999999999999999999999753 33222222221000    


Q ss_pred             hHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchh
Q 003239          335 DYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSME  414 (837)
Q Consensus       335 ~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e  414 (837)
                                                                         +.                 .         
T Consensus       232 ---------------------------------------------------~~-----------------~---------  234 (290)
T 3fme_A          232 ---------------------------------------------------PQ-----------------L---------  234 (290)
T ss_dssp             ---------------------------------------------------CC-----------------C---------
T ss_pred             ---------------------------------------------------CC-----------------c---------
Confidence                                                               00                 0         


Q ss_pred             hhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          415 DISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       415 ~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                         .....++++.+||.+||+.||++|||++|+|+||||+..
T Consensus       235 ---~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          235 ---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             ---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             ---ccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence               001134678999999999999999999999999999863


No 118
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=2.7e-42  Score=368.08  Aligned_cols=260  Identities=27%  Similarity=0.422  Sum_probs=217.8

Q ss_pred             eeeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeE
Q 003239          101 VLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVR  176 (837)
Q Consensus       101 ~l~~~~~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVk  176 (837)
                      .+......++|++.+.||+|+||+||+|++..+++.||+|++...    ....+.+.+|+.+++.+       .|+||++
T Consensus         7 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~   79 (294)
T 2rku_A            7 VLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-------AHQHVVG   79 (294)
T ss_dssp             EEEETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-------CCTTBCC
T ss_pred             eeeCCCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhC-------CCCCEee
Confidence            344455668999999999999999999999999999999999753    34456778899999888       6899999


Q ss_pred             EeEEEeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeE
Q 003239          177 IYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI  255 (837)
Q Consensus       177 l~d~f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~I  255 (837)
                      +++++...+..++||||+. ++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+
T Consensus        80 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~  154 (294)
T 2rku_A           80 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEV  154 (294)
T ss_dssp             EEEEEECSSEEEEEEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCE
T ss_pred             eeeeeccCCEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEc---CCCCE
Confidence            9999999999999999998 5888877654  3699999999999999999999999999999999999995   67889


Q ss_pred             EEEecccccccC---CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q 003239          256 KIIDFGSACTED---RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ  332 (837)
Q Consensus       256 KL~DFGlA~~~~---~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~  332 (837)
                      ||+|||++....   .......+|+.|+|||++.+..++.++|||||||++|+|++|+.||......+....+.....  
T Consensus       155 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--  232 (294)
T 2rku_A          155 KIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--  232 (294)
T ss_dssp             EECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC--
T ss_pred             EEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccC--
Confidence            999999997543   223445789999999999998999999999999999999999999987765544333221000  


Q ss_pred             CchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCc
Q 003239          333 PPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLS  412 (837)
Q Consensus       333 Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~  412 (837)
                                                                                             ..|      
T Consensus       233 -----------------------------------------------------------------------~~~------  235 (294)
T 2rku_A          233 -----------------------------------------------------------------------SIP------  235 (294)
T ss_dssp             -----------------------------------------------------------------------CCC------
T ss_pred             -----------------------------------------------------------------------CCc------
Confidence                                                                                   000      


Q ss_pred             hhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          413 MEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       413 ~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                             ...++.+.+||++||+.||++|||++|+|+||||++...
T Consensus       236 -------~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~  274 (294)
T 2rku_A          236 -------KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  274 (294)
T ss_dssp             -------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             -------cccCHHHHHHHHHHcccChhhCcCHHHHhhChheecCCc
Confidence                   013367889999999999999999999999999998654


No 119
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=2e-42  Score=387.41  Aligned_cols=197  Identities=23%  Similarity=0.415  Sum_probs=170.6

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|+++++||+|+||+||+|.+.. ++.||||+++..   ....+.+.+|+.+|+.|.+     .|+||+++++++...+
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~-----~~~~iv~~~~~~~~~~  129 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-----HSDKIIRLYDYEITDQ  129 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT-----TCTTBCCEEEEEECSS
T ss_pred             CceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHccc-----CCCeEEEEEEEEecCC
Confidence            679999999999999999998865 889999999753   3455778899999999964     4799999999999999


Q ss_pred             eEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       186 ~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      .+|||||+.+++|.+++....  .+++.+++.++.||+.||.|||+++||||||||+|||++    ++.+||+|||++..
T Consensus       130 ~~~lv~E~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~----~~~~kl~DFG~a~~  203 (390)
T 2zmd_A          130 YIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQ  203 (390)
T ss_dssp             EEEEEEECCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES----SSCEEECCCSSSCC
T ss_pred             EEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE----CCeEEEEecCcccc
Confidence            999999977789999987653  689999999999999999999999999999999999994    47899999999975


Q ss_pred             cCCc-----ceeeccCccccCchhhcC-----------CCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          266 EDRT-----VYSYIQSRYYRSPEVLLG-----------YQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       266 ~~~~-----~~~~~GT~~Y~APEvl~~-----------~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                      ....     ....+||+.|+|||++.+           ..++.++||||||||+|||++|++||....
T Consensus       204 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~  271 (390)
T 2zmd_A          204 MQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  271 (390)
T ss_dssp             C---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             ccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence            4322     234579999999999975           368999999999999999999999997653


No 120
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=1.1e-41  Score=362.95  Aligned_cols=257  Identities=26%  Similarity=0.412  Sum_probs=215.0

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----------hhHHHHHHHHHHHHHhhcccCCCCCCceeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----------AYYQQALVEVSILTTLNKKYDREDKHHIVRI  177 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl  177 (837)
                      .++|++.+.||+|+||.||+|++..+++.||||+++...          ...+.+.+|+.+++++.      +||||+++
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------~h~~i~~~   89 (298)
T 1phk_A           16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS------GHPNIIQL   89 (298)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT------TCTTBCCE
T ss_pred             hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhc------CCCCEeee
Confidence            489999999999999999999999999999999997532          23456788999999984      48999999


Q ss_pred             eEEEeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEE
Q 003239          178 YEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIK  256 (837)
Q Consensus       178 ~d~f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IK  256 (837)
                      ++++...+..++||||+. ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++   .++.+|
T Consensus        90 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~k  164 (298)
T 1phk_A           90 KDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIK  164 (298)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEE
T ss_pred             eeeeccCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEc---CCCcEE
Confidence            999999999999999998 5899988764  3699999999999999999999999999999999999995   677899


Q ss_pred             EEecccccccC--CcceeeccCccccCchhhc------CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Q 003239          257 IIDFGSACTED--RTVYSYIQSRYYRSPEVLL------GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRI  328 (837)
Q Consensus       257 L~DFGlA~~~~--~~~~~~~GT~~Y~APEvl~------~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~  328 (837)
                      |+|||++....  .......+++.|+|||++.      ...++.++|||||||++|+|++|..||...+..+....+...
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  244 (298)
T 1phk_A          165 LTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG  244 (298)
T ss_dssp             ECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             EecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcC
Confidence            99999997543  2334567899999999986      446889999999999999999999999887766655544331


Q ss_pred             hCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCC
Q 003239          329 LGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYR  408 (837)
Q Consensus       329 lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~  408 (837)
                      ....+                                                             .             
T Consensus       245 ~~~~~-------------------------------------------------------------~-------------  250 (298)
T 1phk_A          245 NYQFG-------------------------------------------------------------S-------------  250 (298)
T ss_dssp             CCCCC-------------------------------------------------------------T-------------
T ss_pred             CcccC-------------------------------------------------------------c-------------
Confidence            11000                                                             0             


Q ss_pred             CCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          409 KNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       409 ~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                              ......+..+.+||.+||..||++|||++|+|+||||++..
T Consensus       251 --------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          251 --------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             --------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             --------ccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence                    00012346789999999999999999999999999999754


No 121
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=2.8e-42  Score=376.76  Aligned_cols=260  Identities=27%  Similarity=0.422  Sum_probs=218.3

Q ss_pred             eeeccccCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeE
Q 003239          101 VLVNAETQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVR  176 (837)
Q Consensus       101 ~l~~~~~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVk  176 (837)
                      .+......++|++.+.||+|+||.||+|++..+++.||+|++...    ....+.+.+|+.+++.+       .|+||++
T Consensus        33 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~  105 (335)
T 2owb_A           33 VLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-------AHQHVVG  105 (335)
T ss_dssp             EEEETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTC-------CCTTBCC
T ss_pred             eecCcccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhC-------CCCCCCe
Confidence            334445568999999999999999999999999999999999753    34556788899999888       6899999


Q ss_pred             EeEEEeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeE
Q 003239          177 IYEYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI  255 (837)
Q Consensus       177 l~d~f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~I  255 (837)
                      +++++...+.+|+||||+. ++|.+++...  ..+++.+++.++.||+.||.|||++||+||||||+|||++   .++.+
T Consensus       106 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---~~~~~  180 (335)
T 2owb_A          106 FHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEV  180 (335)
T ss_dssp             EEEEEECSSEEEEEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCE
T ss_pred             EEEEEecCCeEEEEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEc---CCCCE
Confidence            9999999999999999998 5888887654  3699999999999999999999999999999999999995   66889


Q ss_pred             EEEecccccccC---CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q 003239          256 KIIDFGSACTED---RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ  332 (837)
Q Consensus       256 KL~DFGlA~~~~---~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~  332 (837)
                      ||+|||++....   .......+|+.|+|||++.+..++.++|||||||++|+|++|+.||......+.+..+....-  
T Consensus       181 kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--  258 (335)
T 2owb_A          181 KIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY--  258 (335)
T ss_dssp             EECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC--
T ss_pred             EEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCC--
Confidence            999999997543   223445789999999999999999999999999999999999999987765554433322000  


Q ss_pred             CchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCc
Q 003239          333 PPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLS  412 (837)
Q Consensus       333 Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~  412 (837)
                                                                                             .+|      
T Consensus       259 -----------------------------------------------------------------------~~~------  261 (335)
T 2owb_A          259 -----------------------------------------------------------------------SIP------  261 (335)
T ss_dssp             -----------------------------------------------------------------------CCC------
T ss_pred             -----------------------------------------------------------------------CCC------
Confidence                                                                                   000      


Q ss_pred             hhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCC
Q 003239          413 MEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPF  458 (837)
Q Consensus       413 ~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~  458 (837)
                             ..+++.+.+||++||+.||++|||++|+|+||||+....
T Consensus       262 -------~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~  300 (335)
T 2owb_A          262 -------KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYI  300 (335)
T ss_dssp             -------TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCC
T ss_pred             -------ccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCc
Confidence                   013367889999999999999999999999999998654


No 122
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=3.9e-42  Score=371.72  Aligned_cols=258  Identities=26%  Similarity=0.449  Sum_probs=210.2

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee---
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC---  183 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~---  183 (837)
                      ..++|++++.||+|+||.||+|++..+++.||||++.......+.+.+|+.+++.+.      .|+||+++++++..   
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~------~h~~i~~~~~~~~~~~~   95 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS------HHRNIATYYGAFIKKNP   95 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHC------CSTTBCCEEEEEEECC-
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhcc------CCCCeeeeeeEEeeccC
Confidence            348999999999999999999999999999999999876555678889999999984      58999999999987   


Q ss_pred             ---cceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          184 ---QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       184 ---~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                         .+.++|||||+.+ +|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|
T Consensus        96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~---~~~~~kl~D  172 (326)
T 2x7f_A           96 PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVD  172 (326)
T ss_dssp             -CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTCCEEECC
T ss_pred             ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEc---CCCCEEEee
Confidence               4689999999985 999998876556799999999999999999999999999999999999995   678899999


Q ss_pred             cccccccCCc---ceeeccCccccCchhhc-----CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q 003239          260 FGSACTEDRT---VYSYIQSRYYRSPEVLL-----GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA  331 (837)
Q Consensus       260 FGlA~~~~~~---~~~~~GT~~Y~APEvl~-----~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~  331 (837)
                      ||++......   .....+++.|+|||++.     +..++.++|||||||++|+|++|..||...+..+.+..+.+... 
T Consensus       173 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-  251 (326)
T 2x7f_A          173 FGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPA-  251 (326)
T ss_dssp             CTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-
T ss_pred             CcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc-
Confidence            9999754332   23457899999999997     45789999999999999999999999987766554433322000 


Q ss_pred             CCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCC
Q 003239          332 QPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNL  411 (837)
Q Consensus       332 ~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l  411 (837)
                        +                                                    ..                       
T Consensus       252 --~----------------------------------------------------~~-----------------------  254 (326)
T 2x7f_A          252 --P----------------------------------------------------RL-----------------------  254 (326)
T ss_dssp             --C----------------------------------------------------CC-----------------------
T ss_pred             --c----------------------------------------------------cC-----------------------
Confidence              0                                                    00                       


Q ss_pred             chhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          412 SMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       412 ~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                            ....++..+.+||.+||..||++|||++|+|+||||++.+
T Consensus       255 ------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  294 (326)
T 2x7f_A          255 ------KSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP  294 (326)
T ss_dssp             ------SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred             ------CccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence                  0001346789999999999999999999999999999755


No 123
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=3.2e-42  Score=365.65  Aligned_cols=252  Identities=23%  Similarity=0.435  Sum_probs=213.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|++.+.||+|+||.||+|++..+++.||||++....    ...+.+.+|+++++.+       .|+||+++++++..
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~   85 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL-------RHPNILRMYNYFHD   85 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-------CCTTBCCEEEEEEC
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcC-------CCCCEeeEEEEEEc
Confidence            479999999999999999999999999999999997532    2245678899999888       58999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+..++||||+. ++|.+++....  .+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||+
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~  160 (284)
T 2vgo_A           86 RKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG---YKGELKIADFGW  160 (284)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTCCEEECCCTT
T ss_pred             CCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEc---CCCCEEEecccc
Confidence            999999999997 58998887653  599999999999999999999999999999999999995   667899999999


Q ss_pred             ccccCC-cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          263 ACTEDR-TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       263 A~~~~~-~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      +..... ......+++.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.....           
T Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-----------  229 (284)
T 2vgo_A          161 SVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDL-----------  229 (284)
T ss_dssp             CEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC-----------
T ss_pred             cccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhcccc-----------
Confidence            865433 23456789999999999999999999999999999999999999988766554443322000           


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                                    .+|             ..
T Consensus       230 --------------------------------------------------------------~~~-------------~~  234 (284)
T 2vgo_A          230 --------------------------------------------------------------KFP-------------PF  234 (284)
T ss_dssp             --------------------------------------------------------------CCC-------------TT
T ss_pred             --------------------------------------------------------------CCC-------------Cc
Confidence                                                                          000             01


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      .+..+.+||.+||..||++|||++|+|+||||+...
T Consensus       235 ~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~  270 (284)
T 2vgo_A          235 LSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKANS  270 (284)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHC
T ss_pred             CCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhc
Confidence            346789999999999999999999999999998644


No 124
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=1.1e-42  Score=367.52  Aligned_cols=253  Identities=27%  Similarity=0.456  Sum_probs=186.6

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|++.+.||+|+||.||+|++..+++.||||++....    ...+.+.+|+.+++.+       .||||+++++++..
T Consensus        10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~   82 (278)
T 3cok_A           10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL-------KHPSILELYNYFED   82 (278)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTB-------CCTTBCCEEEEEEC
T ss_pred             cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhC-------CCCCeEeEEEEEcc
Confidence            378999999999999999999999999999999997532    2236678899988887       68999999999999


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+..++||||+. ++|.+++... ...+++..++.++.||+.||+|||++||+||||||+||+++   .++.+||+|||+
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~  158 (278)
T 3cok_A           83 SNYVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKIADFGL  158 (278)
T ss_dssp             SSEEEEEEECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEEC---TTCCEEECCCTT
T ss_pred             CCeEEEEEecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEEEeecc
Confidence            999999999997 5888887754 35699999999999999999999999999999999999995   678899999999


Q ss_pred             ccccCC---cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHH
Q 003239          263 ACTEDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       263 A~~~~~---~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      +.....   ......+|+.|+|||++.+..++.++|||||||++|+|++|+.||......+.+..+..            
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~------------  226 (278)
T 3cok_A          159 ATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL------------  226 (278)
T ss_dssp             CEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCS------------
T ss_pred             eeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhh------------
Confidence            975432   23345789999999999998999999999999999999999999976532211110000            


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                        .             .+..           .
T Consensus       227 --------------------------------------------------~-------------~~~~-----------~  232 (278)
T 3cok_A          227 --------------------------------------------------A-------------DYEM-----------P  232 (278)
T ss_dssp             --------------------------------------------------S-------------CCCC-----------C
T ss_pred             --------------------------------------------------c-------------ccCC-----------c
Confidence                                                              0             0000           0


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      ...+.++.+||.+||+.||++|||++|+|+||||.+..
T Consensus       233 ~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          233 SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred             cccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence            11346789999999999999999999999999998754


No 125
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=3.9e-42  Score=363.90  Aligned_cols=258  Identities=27%  Similarity=0.406  Sum_probs=212.8

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-------hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      ++|++.+.||+|+||+||+|++..+++.||||+++...       ...+.+.+|+.+++.+       .||||+++++++
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~   77 (283)
T 3bhy_A            5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI-------RHPNIITLHDIF   77 (283)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHC-------CCTTBCCEEEEE
T ss_pred             hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhC-------CCCCeeehhhee
Confidence            68999999999999999999999999999999997532       1357788999999998       589999999999


Q ss_pred             eecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccC-CCCeEEEEe
Q 003239          182 VCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV-KPAEIKIID  259 (837)
Q Consensus       182 ~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~-~~~~IKL~D  259 (837)
                      ...+..++||||+. ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.+. ....+||+|
T Consensus        78 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~d  155 (283)
T 3bhy_A           78 ENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLID  155 (283)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred             cCCCeEEEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEe
Confidence            99999999999996 6899988764  3699999999999999999999999999999999999996322 233899999


Q ss_pred             cccccccCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHH
Q 003239          260 FGSACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV  337 (837)
Q Consensus       260 FGlA~~~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~  337 (837)
                      ||++.....  ......+++.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+..+..... ..+   
T Consensus       156 fg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~---  231 (283)
T 3bhy_A          156 FGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY-DFD---  231 (283)
T ss_dssp             CTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCC-CCC---
T ss_pred             cccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhccc-CCc---
Confidence            999975433  23345789999999999998999999999999999999999999988876665554432111 000   


Q ss_pred             HHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhh
Q 003239          338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS  417 (837)
Q Consensus       338 l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~  417 (837)
                                                                                   .+..               
T Consensus       232 -------------------------------------------------------------~~~~---------------  235 (283)
T 3bhy_A          232 -------------------------------------------------------------EEYF---------------  235 (283)
T ss_dssp             -------------------------------------------------------------HHHH---------------
T ss_pred             -------------------------------------------------------------chhc---------------
Confidence                                                                         0000               


Q ss_pred             hhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       418 ~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                        ...++.+.+||++||..||++|||++|+|+||||+...
T Consensus       236 --~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          236 --SNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             --TTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             --ccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence              11346789999999999999999999999999998743


No 126
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.2e-41  Score=362.38  Aligned_cols=254  Identities=23%  Similarity=0.356  Sum_probs=206.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee-
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC-  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~-  183 (837)
                      .+.|++.+.||+|+||+||+|.+..+++.||+|+++..   ....+.+.+|+.+++.+       .|+||+++++++.. 
T Consensus        25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~   97 (290)
T 1t4h_A           25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGL-------QHPNIVRFYDSWEST   97 (290)
T ss_dssp             SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEEEEE
T ss_pred             ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhC-------CCCCeeeeeeeeccc
Confidence            46799999999999999999999999999999999753   34556788899999888       68999999999876 


Q ss_pred             ---cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCC--eeeccCCCCCeeeeccCCCCeEEE
Q 003239          184 ---QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG--IIHCDLKPENILLCTSVKPAEIKI  257 (837)
Q Consensus       184 ---~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~g--IVHrDLKPeNILl~~~~~~~~IKL  257 (837)
                         ...+|+||||+. ++|.+++...  ..+++..++.++.||+.||.|||+++  |+||||||+|||++  ...+.+||
T Consensus        98 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~--~~~~~~kl  173 (290)
T 1t4h_A           98 VKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT--GPTGSVKI  173 (290)
T ss_dssp             SSSCEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES--STTSCEEE
T ss_pred             cCCCceEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE--CCCCCEEE
Confidence               467999999997 5999988764  46999999999999999999999999  99999999999995  35678999


Q ss_pred             EecccccccCCc-ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchH
Q 003239          258 IDFGSACTEDRT-VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY  336 (837)
Q Consensus       258 ~DFGlA~~~~~~-~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~  336 (837)
                      +|||++...... .....+|+.|+|||++.+ .++.++|||||||++|+|++|+.||........+...... + ..+. 
T Consensus       174 ~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~-~~~~-  249 (290)
T 1t4h_A          174 GDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS-G-VKPA-  249 (290)
T ss_dssp             CCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT-T-CCCG-
T ss_pred             eeCCCcccccccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhc-c-CCcc-
Confidence            999999755433 345678999999998875 6999999999999999999999999775443332221110 0 0000 


Q ss_pred             HHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhh
Q 003239          337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI  416 (837)
Q Consensus       337 ~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l  416 (837)
                                                                                                      
T Consensus       250 --------------------------------------------------------------------------------  249 (290)
T 1t4h_A          250 --------------------------------------------------------------------------------  249 (290)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       417 ~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      ......++++.+||.+||+.||++|||++|+|+||||++.
T Consensus       250 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          250 SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence            0001123678999999999999999999999999999874


No 127
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=6.7e-43  Score=386.93  Aligned_cols=199  Identities=15%  Similarity=0.142  Sum_probs=162.5

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEe------
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIY------  178 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~------  178 (837)
                      .+|++.++||+|+||+||+|++..+++.||||+++..    ....+.+.+|+.+++.|+.     .||||++++      
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-----~hp~iv~~~~~~~~p  136 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-----ESPEEARDRRRLLLP  136 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC---------------CBCCC
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-----cChhhhhhceeEEee
Confidence            5699999999999999999999999999999999873    3445667789888888853     589988866      


Q ss_pred             -EEEeec-----------------ceEEEEEeccchhHHHHHHhhccCCCCHHHH------HHHHHhHHHHHhhhhcCCe
Q 003239          179 -EYFVCQ-----------------RHLCICFELLDSNLYELIKINHFRGLSLSIV------QLFSKQILRGLSLLKDAGI  234 (837)
Q Consensus       179 -d~f~~~-----------------~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i------~~I~~QIl~aL~yLHs~gI  234 (837)
                       +++...                 ..+|||||||+++|.+++.... ..+.+..+      ..++.||+.||+|||++||
T Consensus       137 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~i  215 (371)
T 3q60_A          137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGL  215 (371)
T ss_dssp             CEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCC
Confidence             555433                 3489999999999999998753 23455555      6777999999999999999


Q ss_pred             eeccCCCCCeeeeccCCCCeEEEEecccccccCCcceeeccCccccCchhhcC--CCCCccchHHHHHHHHHHHHhCCCC
Q 003239          235 IHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLG--YQYTTAIDMWSFGCIVAELFLGLPL  312 (837)
Q Consensus       235 VHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~--~~yt~ksDIWSLG~ILyELltG~~P  312 (837)
                      |||||||+||||+   .++.+||+|||+++..........+|+.|+|||++.+  ..++.++|||||||++|||++|+.|
T Consensus       216 vHrDikp~NIll~---~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P  292 (371)
T 3q60_A          216 VHGHFTPDNLFIM---PDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP  292 (371)
T ss_dssp             EETTCSGGGEEEC---TTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ccCcCCHHHEEEC---CCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence            9999999999995   6788999999999877766556677899999999987  6899999999999999999999999


Q ss_pred             CCCC
Q 003239          313 FPGA  316 (837)
Q Consensus       313 F~g~  316 (837)
                      |.+.
T Consensus       293 f~~~  296 (371)
T 3q60_A          293 FGLV  296 (371)
T ss_dssp             TTBC
T ss_pred             CCCc
Confidence            9765


No 128
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=2.5e-42  Score=405.12  Aligned_cols=261  Identities=26%  Similarity=0.391  Sum_probs=215.7

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      ..++|++.++||+|+||+||+|++..+++.||||++++..    .....+.+|+++|+.+       .||||++++++|.
T Consensus       182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l-------~hp~Iv~l~~~~~  254 (576)
T 2acx_A          182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-------NSRFVVSLAYAYE  254 (576)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-------CCTTBCCEEEEEE
T ss_pred             cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHc-------CCCCEeeEEEEEe
Confidence            3478999999999999999999999999999999997532    2345678899999998       6899999999999


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      +.+.+||||||+. ++|.+++.......+++..++.++.||+.||+|||++|||||||||+||||+   .++.+||+|||
T Consensus       255 ~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld---~~g~vKL~DFG  331 (576)
T 2acx_A          255 TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD---DHGHIRISDLG  331 (576)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCT
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEe---CCCCeEEEecc
Confidence            9999999999997 6898888766545699999999999999999999999999999999999995   67899999999


Q ss_pred             cccccCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHH
Q 003239          262 SACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLK  339 (837)
Q Consensus       262 lA~~~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~  339 (837)
                      ++.....  .....+||+.|+|||++.+..|+.++||||||||+|||++|.+||.+.........+.+.+...+.     
T Consensus       332 la~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~-----  406 (576)
T 2acx_A          332 LAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPE-----  406 (576)
T ss_dssp             TCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC-----
T ss_pred             cceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccc-----
Confidence            9976533  334568999999999999999999999999999999999999999765321111111110000000     


Q ss_pred             hhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhh
Q 003239          340 EAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKE  419 (837)
Q Consensus       340 ~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~  419 (837)
                                                                                      .+|             
T Consensus       407 ----------------------------------------------------------------~~p-------------  409 (576)
T 2acx_A          407 ----------------------------------------------------------------EYS-------------  409 (576)
T ss_dssp             ----------------------------------------------------------------CCC-------------
T ss_pred             ----------------------------------------------------------------cCC-------------
Confidence                                                                            000             


Q ss_pred             HHhHHHHHHHHHHhcccCcCCCC-----CHHHHHcCccCCCCCCC
Q 003239          420 SQIRLALVDFLKGLVEFDPAKRW-----SPFQASRHPFVTGEPFT  459 (837)
Q Consensus       420 ~~~s~~l~DLL~kmL~~DP~kRp-----Ta~EaL~HPff~~~~~~  459 (837)
                      ..+++++.+||++||+.||++|+     |++|+++||||++..+.
T Consensus       410 ~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~  454 (576)
T 2acx_A          410 ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFK  454 (576)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHH
T ss_pred             ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHH
Confidence            11457789999999999999999     89999999999987653


No 129
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=2.8e-42  Score=402.76  Aligned_cols=201  Identities=26%  Similarity=0.434  Sum_probs=178.0

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      ..++|+++++||+|+||+||+|+++.+++.||||++++..    ...+.+.+|+.+|+.+       .||||++++++|.
T Consensus       183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l-------~hp~Iv~l~~~~~  255 (543)
T 3c4z_A          183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-------HSRFIVSLAYAFE  255 (543)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHC-------CCTTBCCEEEEEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhc-------CCCCEeeEEEEEe
Confidence            3479999999999999999999999999999999997542    2346678899999998       6899999999999


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhc--cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          183 CQRHLCICFELLD-SNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~--~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      ..+.+||||||+. ++|.+++....  ...+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|
T Consensus       256 ~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~---~~g~vkL~D  332 (543)
T 3c4z_A          256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNVRISD  332 (543)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECC
T ss_pred             eCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEe---CCCCEEEee
Confidence            9999999999998 58888887543  34699999999999999999999999999999999999995   678999999


Q ss_pred             cccccccCCc---ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          260 FGSACTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       260 FGlA~~~~~~---~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                      ||+++.....   ....+||+.|+|||++.+..|+.++||||||||+|||++|++||.+..
T Consensus       333 FGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~  393 (543)
T 3c4z_A          333 LGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG  393 (543)
T ss_dssp             CTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred             cceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence            9999764332   234589999999999999999999999999999999999999997653


No 130
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=8.4e-43  Score=394.00  Aligned_cols=259  Identities=30%  Similarity=0.498  Sum_probs=200.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---------hhHHHHHHHHHHHHHhhcccCCCCCCceeEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---------AYYQQALVEVSILTTLNKKYDREDKHHIVRIY  178 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~---------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~  178 (837)
                      .++|++.++||+|+||+||+|++..+++.||||++.+..         .....+.+|+.+|+++       .||||++++
T Consensus       134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~l~  206 (419)
T 3i6u_A          134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL-------NHPCIIKIK  206 (419)
T ss_dssp             HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHC-------CCTTBCCCC
T ss_pred             hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhC-------CCCCEeeEE
Confidence            478999999999999999999999999999999997532         1122467899999999       689999999


Q ss_pred             EEEeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEE
Q 003239          179 EYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI  257 (837)
Q Consensus       179 d~f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL  257 (837)
                      +++.. +..||||||+. ++|.+++...  +.+++..++.++.||+.||+|||+++||||||||+|||++.+.....+||
T Consensus       207 ~~~~~-~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl  283 (419)
T 3i6u_A          207 NFFDA-EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI  283 (419)
T ss_dssp             EEEES-SEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred             EEEec-CceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEE
Confidence            99864 45899999997 4887776543  46999999999999999999999999999999999999975555667999


Q ss_pred             EecccccccCCc--ceeeccCccccCchhhcC---CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q 003239          258 IDFGSACTEDRT--VYSYIQSRYYRSPEVLLG---YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ  332 (837)
Q Consensus       258 ~DFGlA~~~~~~--~~~~~GT~~Y~APEvl~~---~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~  332 (837)
                      +|||+++.....  ....+||+.|+|||++.+   ..++.++|||||||++|+|++|.+||........+...+....  
T Consensus       284 ~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~--  361 (419)
T 3i6u_A          284 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK--  361 (419)
T ss_dssp             CCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTC--
T ss_pred             eecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCC--
Confidence            999999765433  345689999999999864   5788999999999999999999999976432211111111000  


Q ss_pred             CchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCc
Q 003239          333 PPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLS  412 (837)
Q Consensus       333 Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~  412 (837)
                                                           +                         ....+.           
T Consensus       362 -------------------------------------~-------------------------~~~~~~-----------  368 (419)
T 3i6u_A          362 -------------------------------------Y-------------------------NFIPEV-----------  368 (419)
T ss_dssp             -------------------------------------C-------------------------CCCHHH-----------
T ss_pred             -------------------------------------C-------------------------CCCchh-----------
Confidence                                                 0                         000000           


Q ss_pred             hhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          413 MEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       413 ~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                            ...+++.+.+||++||+.||++|||++|+|+||||++..
T Consensus       369 ------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~  407 (419)
T 3i6u_A          369 ------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  407 (419)
T ss_dssp             ------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHH
T ss_pred             ------hcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChh
Confidence                  112457789999999999999999999999999998743


No 131
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=2.6e-42  Score=379.53  Aligned_cols=204  Identities=29%  Similarity=0.450  Sum_probs=178.2

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecce
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH  186 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~  186 (837)
                      ++|+++++||+|+||+||+|++..+++.||+|+++..  ....+.+.+|+.+++.+       .|+||+++++++...+.
T Consensus        33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~  105 (360)
T 3eqc_A           33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC-------NSPYIVGFYGAFYSDGE  105 (360)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC-------CCTTBCCEEEEEEETTE
T ss_pred             ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC-------CCCCEEEEeEEEEECCE
Confidence            7899999999999999999999999999999999864  44556788899888887       68999999999999999


Q ss_pred             EEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcC-CeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          187 LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-GIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       187 l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~-gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      +||||||+.+ +|.+++....  .+++..++.++.||+.||.|||++ ||+||||||+|||++   .++.+||+|||++.
T Consensus       106 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~  180 (360)
T 3eqc_A          106 ISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVSG  180 (360)
T ss_dssp             EEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCCEEECCCCCCH
T ss_pred             EEEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC---CCCCEEEEECCCCc
Confidence            9999999975 9999887653  599999999999999999999986 999999999999996   66789999999986


Q ss_pred             ccC-CcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Q 003239          265 TED-RTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRR  324 (837)
Q Consensus       265 ~~~-~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~  324 (837)
                      ... .......+|+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....
T Consensus       181 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  241 (360)
T 3eqc_A          181 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM  241 (360)
T ss_dssp             HHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHH
T ss_pred             ccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            432 223446889999999999999999999999999999999999999988776655433


No 132
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=3.4e-42  Score=372.35  Aligned_cols=202  Identities=22%  Similarity=0.393  Sum_probs=174.5

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      .++|++.++||+|+||+||+|++..+++.||||+++...  ...+.+.+|+++|+.+       .|+||+++++++....
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~   80 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-------NHKNIVKLFAIEEETT   80 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-------CCTTBCCEEEEEECTT
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-------CCCCcceEEEEeecCC
Confidence            479999999999999999999999999999999998532  3356778999999999       5899999999998765


Q ss_pred             --eEEEEEeccc-hhHHHHHHhhcc-CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeec-cCCCCeEEEEec
Q 003239          186 --HLCICFELLD-SNLYELIKINHF-RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCT-SVKPAEIKIIDF  260 (837)
Q Consensus       186 --~l~LVmEy~~-gsL~d~l~~~~~-~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~-~~~~~~IKL~DF  260 (837)
                        ..||||||+. ++|.+++..... ..+++..++.++.||+.||+|||++|||||||||+|||+.. ++..+.+||+||
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Df  160 (319)
T 4euu_A           81 TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF  160 (319)
T ss_dssp             TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCC
T ss_pred             CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccC
Confidence              8899999997 689998876542 23999999999999999999999999999999999999832 235678999999


Q ss_pred             ccccccCC--cceeeccCccccCchhhc--------CCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          261 GSACTEDR--TVYSYIQSRYYRSPEVLL--------GYQYTTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       261 GlA~~~~~--~~~~~~GT~~Y~APEvl~--------~~~yt~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                      |+++....  .....++|+.|+|||++.        +..++.++||||||||+|||++|+.||...
T Consensus       161 g~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  226 (319)
T 4euu_A          161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF  226 (319)
T ss_dssp             TTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred             CCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence            99976433  334567899999999986        468999999999999999999999999653


No 133
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=1.5e-41  Score=376.44  Aligned_cols=254  Identities=26%  Similarity=0.444  Sum_probs=212.2

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---------hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYE  179 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~---------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d  179 (837)
                      ++|++.+.||+|+||+||+|++..+++.||||+++...         ...+.+.+|+.+++++.      .||||+++++
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------~hp~iv~~~~  167 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA------GHPHIITLID  167 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHT------TCTTBCCEEE
T ss_pred             hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhc------CCCCEeEEEE
Confidence            68999999999999999999999999999999997532         22456778999999984      5899999999


Q ss_pred             EEeecceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEE
Q 003239          180 YFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII  258 (837)
Q Consensus       180 ~f~~~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~  258 (837)
                      ++......||||||+.+ +|.+++...  ..+++..++.++.||+.||.|||+.||+||||||+|||++   .++.+||+
T Consensus       168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~---~~~~ikl~  242 (365)
T 2y7j_A          168 SYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD---DNMQIRLS  242 (365)
T ss_dssp             EEEBSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEEC
T ss_pred             EEeeCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEEE
Confidence            99999999999999985 898888754  3699999999999999999999999999999999999995   67899999


Q ss_pred             ecccccccC--CcceeeccCccccCchhhcC------CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Q 003239          259 DFGSACTED--RTVYSYIQSRYYRSPEVLLG------YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILG  330 (837)
Q Consensus       259 DFGlA~~~~--~~~~~~~GT~~Y~APEvl~~------~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG  330 (837)
                      |||++....  ......+||+.|+|||++.+      ..++.++|||||||++|+|++|..||...+..+.+..+.....
T Consensus       243 DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~  322 (365)
T 2y7j_A          243 DFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQY  322 (365)
T ss_dssp             CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             ecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC
Confidence            999997543  23445689999999999863      3588999999999999999999999988776665555433111


Q ss_pred             CCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCC
Q 003239          331 AQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKN  410 (837)
Q Consensus       331 ~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~  410 (837)
                       .++.                                                                           
T Consensus       323 -~~~~---------------------------------------------------------------------------  326 (365)
T 2y7j_A          323 -QFSS---------------------------------------------------------------------------  326 (365)
T ss_dssp             -CCCH---------------------------------------------------------------------------
T ss_pred             -CCCC---------------------------------------------------------------------------
Confidence             0000                                                                           


Q ss_pred             CchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          411 LSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       411 l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                            ......+..+.+||++||+.||++|||++|+|+||||++
T Consensus       327 ------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          327 ------PEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             ------HHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             ------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence                  000113467899999999999999999999999999974


No 134
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=3.3e-42  Score=396.42  Aligned_cols=250  Identities=27%  Similarity=0.413  Sum_probs=212.9

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ++|++.+.||+|+||+||+|++..+++.||||+++...    ...+.+.+|+.+|+.+       .||||+++++++...
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l-------~HpnIv~l~~~~~~~   88 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF-------RHPHIIKLYQVISTP   88 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC-------CCTTBCCEEEEEECS
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC-------CCCCCCcEEEEEEEC
Confidence            78999999999999999999999999999999997542    2345778899999887       689999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +.+|||||||. ++|.+++...  +.+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||++
T Consensus        89 ~~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~---~~~~vkL~DFG~a  163 (476)
T 2y94_A           89 SDIFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLS  163 (476)
T ss_dssp             SEEEEEEECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEC---TTCCEEECCCSSC
T ss_pred             CEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEe---cCCCeEEEeccch
Confidence            99999999996 6898888643  4699999999999999999999999999999999999995   6788999999999


Q ss_pred             cccCC--cceeeccCccccCchhhcCCCC-CccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHh
Q 003239          264 CTEDR--TVYSYIQSRYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE  340 (837)
Q Consensus       264 ~~~~~--~~~~~~GT~~Y~APEvl~~~~y-t~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~  340 (837)
                      .....  .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+..+...++..... .        
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~-~--------  234 (476)
T 2y94_A          164 NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIF-Y--------  234 (476)
T ss_dssp             EECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCC-C--------
T ss_pred             hhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCc-C--------
Confidence            76433  3345689999999999998766 6899999999999999999999988766555544432100 0        


Q ss_pred             hhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhH
Q 003239          341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES  420 (837)
Q Consensus       341 ~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~  420 (837)
                                                                                      .|             .
T Consensus       235 ----------------------------------------------------------------~p-------------~  237 (476)
T 2y94_A          235 ----------------------------------------------------------------TP-------------Q  237 (476)
T ss_dssp             ----------------------------------------------------------------CC-------------T
T ss_pred             ----------------------------------------------------------------CC-------------c
Confidence                                                                            00             0


Q ss_pred             HhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       421 ~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      ..++++.+||++||+.||++|||++|+|+||||++.
T Consensus       238 ~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~  273 (476)
T 2y94_A          238 YLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD  273 (476)
T ss_dssp             TCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred             cCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence            134678999999999999999999999999999874


No 135
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=6.1e-42  Score=365.75  Aligned_cols=257  Identities=27%  Similarity=0.441  Sum_probs=208.1

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ..++|++++.||+|+||+||+|++..+++.||+|++... ....+.+.+|+.+++.+       .||||+++++++...+
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~   89 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC-------DHPYIVKLLGAYYHDG   89 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHC-------CCTTBCCEEEEEECC-
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcC-------CCCCEeeeeeeeeeCC
Confidence            348999999999999999999999999999999999753 33457788999999988       6899999999999999


Q ss_pred             eEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      ..++||||+.+ +|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||++.
T Consensus        90 ~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~  165 (302)
T 2j7t_A           90 KLWIMIEFCPGGAVDAIMLELD-RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT---LEGDIRLADFGVSA  165 (302)
T ss_dssp             CEEEEEECCTTEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTSCEEECCCHHHH
T ss_pred             eEEEEEEeCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC---CCCCEEEEECCCCc
Confidence            99999999985 7777766543 5699999999999999999999999999999999999995   66789999999875


Q ss_pred             ccC---CcceeeccCccccCchhhc-----CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchH
Q 003239          265 TED---RTVYSYIQSRYYRSPEVLL-----GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY  336 (837)
Q Consensus       265 ~~~---~~~~~~~GT~~Y~APEvl~-----~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~  336 (837)
                      ...   .......+++.|+|||++.     +..++.++|||||||++|+|++|..||...+..+.+..+.....   +. 
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~-  241 (302)
T 2j7t_A          166 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP---PT-  241 (302)
T ss_dssp             HHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC---CC-
T ss_pred             cccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCC---cc-
Confidence            321   1223457899999999984     56789999999999999999999999988776555444332100   00 


Q ss_pred             HHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhh
Q 003239          337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI  416 (837)
Q Consensus       337 ~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l  416 (837)
                                                                                                     .
T Consensus       242 -------------------------------------------------------------------------------~  242 (302)
T 2j7t_A          242 -------------------------------------------------------------------------------L  242 (302)
T ss_dssp             -------------------------------------------------------------------------------C
T ss_pred             -------------------------------------------------------------------------------c
Confidence                                                                                           0


Q ss_pred             hhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       417 ~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      .....++..+.+||.+||..||++|||++|+|+||||++..
T Consensus       243 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          243 LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             CCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence            00012346789999999999999999999999999999754


No 136
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=5.3e-42  Score=371.32  Aligned_cols=259  Identities=30%  Similarity=0.486  Sum_probs=205.0

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---------hhHHHHHHHHHHHHHhhcccCCCCCCceeEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---------AYYQQALVEVSILTTLNKKYDREDKHHIVRIY  178 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~---------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~  178 (837)
                      .++|++.+.||+|+||.||+|++..+++.||||+++...         .....+.+|+++|+.+       .|+||++++
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~   81 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL-------NHPCIIKIK   81 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHC-------CCTTBCCEE
T ss_pred             hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhC-------CCCCCceEe
Confidence            378999999999999999999999999999999997532         1223477899999998       689999999


Q ss_pred             EEEeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEE
Q 003239          179 EYFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKI  257 (837)
Q Consensus       179 d~f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL  257 (837)
                      +++..+. .|+||||+. ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+|||++.+.....+||
T Consensus        82 ~~~~~~~-~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl  158 (322)
T 2ycf_A           82 NFFDAED-YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI  158 (322)
T ss_dssp             EEEESSS-EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEE
T ss_pred             eEEcCCc-eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEE
Confidence            9987655 899999997 4888887654  46999999999999999999999999999999999999975545567999


Q ss_pred             EecccccccCCc--ceeeccCccccCchhhc---CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q 003239          258 IDFGSACTEDRT--VYSYIQSRYYRSPEVLL---GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ  332 (837)
Q Consensus       258 ~DFGlA~~~~~~--~~~~~GT~~Y~APEvl~---~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~  332 (837)
                      +|||++......  .....+|+.|+|||++.   ...++.++|||||||++|+|++|..||........+...+.... .
T Consensus       159 ~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~  237 (322)
T 2ycf_A          159 TDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK-Y  237 (322)
T ss_dssp             CCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTC-C
T ss_pred             ccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCc-c
Confidence            999999765443  23457899999999985   45789999999999999999999999976432211111111000 0


Q ss_pred             CchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCc
Q 003239          333 PPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLS  412 (837)
Q Consensus       333 Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~  412 (837)
                                                                                     ..+.+.           
T Consensus       238 ---------------------------------------------------------------~~~~~~-----------  243 (322)
T 2ycf_A          238 ---------------------------------------------------------------NFIPEV-----------  243 (322)
T ss_dssp             ---------------------------------------------------------------CCCHHH-----------
T ss_pred             ---------------------------------------------------------------ccCchh-----------
Confidence                                                                           000000           


Q ss_pred             hhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          413 MEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       413 ~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                            ....++.+.+||++||..||++|||++|+|+||||++..
T Consensus       244 ------~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~  282 (322)
T 2ycf_A          244 ------WAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  282 (322)
T ss_dssp             ------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHH
T ss_pred             ------hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHH
Confidence                  012347789999999999999999999999999998744


No 137
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=9.9e-42  Score=366.61  Aligned_cols=255  Identities=27%  Similarity=0.426  Sum_probs=208.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++.+.||+|+||.||+|++..+++.||||+++... ..+.+.+|+.+++.+       .|+||+++++++...+.+
T Consensus        28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~   99 (314)
T 3com_A           28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQC-------DSPHVVKYYGSYFKNTDL   99 (314)
T ss_dssp             --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTC-------CCTTBCCEEEEEEETTEE
T ss_pred             hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhC-------CCCCCccEEEEEEeCCEE
Confidence            478999999999999999999999999999999998653 346678899999988       689999999999999999


Q ss_pred             EEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      |+||||+.+ +|.+++... ...+++..++.++.||+.||.|||++||+|+||||+||+++   .++.+||+|||++...
T Consensus       100 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~~  175 (314)
T 3com_A          100 WIVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN---TEGHAKLADFGVAGQL  175 (314)
T ss_dssp             EEEEECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCEEC
T ss_pred             EEEeecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEEC---CCCCEEEeecccchhh
Confidence            999999985 888888644 35699999999999999999999999999999999999995   6678999999999654


Q ss_pred             CCc---ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhhhc
Q 003239          267 DRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEAKN  343 (837)
Q Consensus       267 ~~~---~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~k~  343 (837)
                      ...   .....+++.|+|||++.+..++.++|||||||++|+|++|..||........+..+....   ++.        
T Consensus       176 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~--------  244 (314)
T 3com_A          176 TDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNP---PPT--------  244 (314)
T ss_dssp             BTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC---CCC--------
T ss_pred             hhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC---Ccc--------
Confidence            332   334578999999999999999999999999999999999999998766544333221100   000        


Q ss_pred             chhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHHhH
Q 003239          344 TSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQIR  423 (837)
Q Consensus       344 ~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~~s  423 (837)
                                                                       +                       .....++
T Consensus       245 -------------------------------------------------~-----------------------~~~~~~~  252 (314)
T 3com_A          245 -------------------------------------------------F-----------------------RKPELWS  252 (314)
T ss_dssp             -------------------------------------------------C-----------------------SSGGGSC
T ss_pred             -------------------------------------------------c-----------------------CCcccCC
Confidence                                                             0                       0001134


Q ss_pred             HHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          424 LALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       424 ~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      ..+.+||.+||..||++|||++|+|+||||++..
T Consensus       253 ~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          253 DNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence            6789999999999999999999999999999765


No 138
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=5.5e-42  Score=360.91  Aligned_cols=253  Identities=23%  Similarity=0.341  Sum_probs=207.3

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecce
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH  186 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~  186 (837)
                      ++|++.+.||+|+||.||+|++..+++.||||+++..  ....+.+.+|+.+++.+       .|+||+++++++...+.
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~   79 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML-------NHENVVKFYGHRREGNI   79 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTC-------CCTTBCCEEEEEEETTE
T ss_pred             cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhc-------CCCCceeeeeEEEcCCE
Confidence            6899999999999999999999999999999999743  23456788899999888       68999999999999999


Q ss_pred             EEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          187 LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       187 l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      .|+||||+.+ +|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~~  154 (276)
T 2yex_A           80 QYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLATV  154 (276)
T ss_dssp             EEEEEECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCEE
T ss_pred             EEEEEEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc---cCCCEEEeeCCCccc
Confidence            9999999975 888877543  3599999999999999999999999999999999999995   668899999999964


Q ss_pred             cC-----CcceeeccCccccCchhhcCCCC-CccchHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCchHHH
Q 003239          266 ED-----RTVYSYIQSRYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLGLPLFPGASEFDL-LRRMIRILGAQPPDYVL  338 (837)
Q Consensus       266 ~~-----~~~~~~~GT~~Y~APEvl~~~~y-t~ksDIWSLG~ILyELltG~~PF~g~s~~e~-l~~I~~~lG~~Pp~~~l  338 (837)
                      ..     .......+++.|+|||++.+..+ +.++|||||||++|+|++|..||........ +..+... .        
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~--------  225 (276)
T 2yex_A          155 FRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK-K--------  225 (276)
T ss_dssp             CEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT-C--------
T ss_pred             cCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc-c--------
Confidence            32     12334578999999999988765 7899999999999999999999976543211 1110000 0        


Q ss_pred             HhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhh
Q 003239          339 KEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISK  418 (837)
Q Consensus       339 ~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~  418 (837)
                                                                          ..                       ...
T Consensus       226 ----------------------------------------------------~~-----------------------~~~  230 (276)
T 2yex_A          226 ----------------------------------------------------TY-----------------------LNP  230 (276)
T ss_dssp             ----------------------------------------------------TT-----------------------STT
T ss_pred             ----------------------------------------------------cc-----------------------cCc
Confidence                                                                00                       000


Q ss_pred             hHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          419 ESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       419 ~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      ....++.+.+||++||+.||++|||++|+|+||||++..
T Consensus       231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  269 (276)
T 2yex_A          231 WKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (276)
T ss_dssp             GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             hhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence            012446789999999999999999999999999998743


No 139
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=2e-42  Score=373.36  Aligned_cols=256  Identities=24%  Similarity=0.392  Sum_probs=206.0

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|++.++||+|+||+||+|++..+++.||||+++..    ......+.+|+.+++.+       .||||+++++++..
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~   83 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-------NHPAIVAVYDTGEA   83 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCC-------CCTTBCCEEEEEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcC-------CCCCcceEEEeeec
Confidence            38999999999999999999999999999999999853    23345667777777666       68999999999987


Q ss_pred             cce----EEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEE
Q 003239          184 QRH----LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII  258 (837)
Q Consensus       184 ~~~----l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~  258 (837)
                      ...    .||||||+. ++|.+++...  ..+++..++.++.||+.||+|||+++|+||||||+|||++   .++.+||+
T Consensus        84 ~~~~~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~  158 (311)
T 3ork_A           84 ETPAGPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVM  158 (311)
T ss_dssp             EETTEEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE---TTSCEEEC
T ss_pred             cCCCCcccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc---CCCCEEEe
Confidence            653    499999997 6899888765  3699999999999999999999999999999999999996   66789999


Q ss_pred             ecccccccCCc------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Q 003239          259 DFGSACTEDRT------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQ  332 (837)
Q Consensus       259 DFGlA~~~~~~------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~  332 (837)
                      |||++......      ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+....+..... .
T Consensus       159 Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~-~  237 (311)
T 3ork_A          159 DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDP-I  237 (311)
T ss_dssp             CCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCC-C
T ss_pred             eccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCC-C
Confidence            99999754322      2235689999999999999999999999999999999999999988877665544433111 0


Q ss_pred             CchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCc
Q 003239          333 PPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLS  412 (837)
Q Consensus       333 Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~  412 (837)
                      ++.                                                                             
T Consensus       238 ~~~-----------------------------------------------------------------------------  240 (311)
T 3ork_A          238 PPS-----------------------------------------------------------------------------  240 (311)
T ss_dssp             CHH-----------------------------------------------------------------------------
T ss_pred             Ccc-----------------------------------------------------------------------------
Confidence            000                                                                             


Q ss_pred             hhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          413 MEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       413 ~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                          .....+++++.+||.+||+.||++||++.++|+|+|++...
T Consensus       241 ----~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          241 ----ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             ----HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred             ----cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence                00012346789999999999999999999999999998644


No 140
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=1.1e-41  Score=371.19  Aligned_cols=257  Identities=23%  Similarity=0.340  Sum_probs=205.3

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      .++|++++.||+|+||+||+|++..+++.||||+++..  ......+..|+.++..      ...|+||+++++++...+
T Consensus        50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~------~~~h~~iv~~~~~~~~~~  123 (340)
T 3an0_A           50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMR------TVDCPFTVTFYGALFREG  123 (340)
T ss_dssp             SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHT------TCCCTTTCCEEEEEECSS
T ss_pred             hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHh------hcCCCcEEEEeeEEEeCC
Confidence            47999999999999999999999999999999999754  2333445555555322      127999999999999999


Q ss_pred             eEEEEEeccchhHHHHHHhh--ccCCCCHHHHHHHHHhHHHHHhhhhcC-CeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          186 HLCICFELLDSNLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDA-GIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       186 ~l~LVmEy~~gsL~d~l~~~--~~~~L~e~~i~~I~~QIl~aL~yLHs~-gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+||||||++++|.+++...  ....+++..++.++.||+.||+|||++ ||+||||||+|||++   .++.+||+|||+
T Consensus       124 ~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~  200 (340)
T 3an0_A          124 DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN---ALGQVKMCDFGI  200 (340)
T ss_dssp             CEEEEECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEEC---STTCEEECCCSH
T ss_pred             cEEEEHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCCEEEeeCCC
Confidence            99999999999998887653  345699999999999999999999987 999999999999995   678999999999


Q ss_pred             ccccCCcc--eeeccCccccCchhhcC----CCCCccchHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhCCCCch
Q 003239          263 ACTEDRTV--YSYIQSRYYRSPEVLLG----YQYTTAIDMWSFGCIVAELFLGLPLFPGA-SEFDLLRRMIRILGAQPPD  335 (837)
Q Consensus       263 A~~~~~~~--~~~~GT~~Y~APEvl~~----~~yt~ksDIWSLG~ILyELltG~~PF~g~-s~~e~l~~I~~~lG~~Pp~  335 (837)
                      +.......  ....||+.|+|||++.+    ..++.++||||||||+|||++|+.||... ...+.+..+.....     
T Consensus       201 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-----  275 (340)
T 3an0_A          201 SGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS-----  275 (340)
T ss_dssp             HHHHSCHHHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC-----
T ss_pred             ceecccccccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCC-----
Confidence            97554332  23478999999999753    37899999999999999999999999763 33333322221000     


Q ss_pred             HHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhh
Q 003239          336 YVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED  415 (837)
Q Consensus       336 ~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~  415 (837)
                                                                        +.                       .    
T Consensus       276 --------------------------------------------------~~-----------------------~----  278 (340)
T 3an0_A          276 --------------------------------------------------PQ-----------------------L----  278 (340)
T ss_dssp             --------------------------------------------------CC-----------------------C----
T ss_pred             --------------------------------------------------CC-----------------------C----
Confidence                                                              00                       0    


Q ss_pred             hhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       416 l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                        ....++.++.+||.+||..||++|||++|+|+||||+...
T Consensus       279 --~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~f~~~~  318 (340)
T 3an0_A          279 --PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE  318 (340)
T ss_dssp             --CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHT
T ss_pred             --CcccCCHHHHHHHHHHccCCcccCcCHHHHhcCcCccccc
Confidence              0011346789999999999999999999999999998643


No 141
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2e-42  Score=381.86  Aligned_cols=197  Identities=23%  Similarity=0.408  Sum_probs=170.1

Q ss_pred             CceEEEEEeccCCceeEEEeecc---CCCeEEEEEEEeCC-----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDA---EMNSFVAVKIIKNQ-----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~---~tg~~VAIKiik~~-----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      ++|+++++||+|+||+||+|++.   .+++.||||+++..     ....+.+.+|+++|+.+.      .|+||++++++
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~------~h~~iv~~~~~  127 (355)
T 1vzo_A           54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR------QSPFLVTLHYA  127 (355)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH------TCTTBCCEEEE
T ss_pred             cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHcc------CCCceeEEEEE
Confidence            79999999999999999999874   58999999998742     123455677999999995      48999999999


Q ss_pred             EeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          181 FVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       181 f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      +...+.++|||||+. ++|.+++...  ..+++..++.++.||+.||.|||+++||||||||+|||++   .++.+||+|
T Consensus       128 ~~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~D  202 (355)
T 1vzo_A          128 FQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTD  202 (355)
T ss_dssp             EEETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEESC
T ss_pred             EeeCceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCcEEEee
Confidence            999999999999997 5898888765  3699999999999999999999999999999999999995   678999999


Q ss_pred             cccccccCC----cceeeccCccccCchhhcCC--CCCccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          260 FGSACTEDR----TVYSYIQSRYYRSPEVLLGY--QYTTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       260 FGlA~~~~~----~~~~~~GT~~Y~APEvl~~~--~yt~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                      ||+++....    .....+||+.|+|||++.+.  .++.++||||||||+|||++|+.||...
T Consensus       203 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~  265 (355)
T 1vzo_A          203 FGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD  265 (355)
T ss_dssp             SSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred             CCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence            999975432    23345799999999999863  5789999999999999999999999754


No 142
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=1e-41  Score=359.33  Aligned_cols=250  Identities=25%  Similarity=0.384  Sum_probs=203.4

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ++|++.+.||+|+||.||+|++..+++.||||+++...    ...+.+.+|+.+++.+       .|+||+++++++...
T Consensus        11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~   83 (276)
T 2h6d_A           11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLF-------RHPHIIKLYQVISTP   83 (276)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTC-------CCTTBCCEEEEEECS
T ss_pred             ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcC-------CCCCEeEEEEEEecC
Confidence            79999999999999999999999999999999997532    2345678899999888       689999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +..++||||+. ++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||++
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~  158 (276)
T 2h6d_A           84 TDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLS  158 (276)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEEC---TTSCEEECCCCGG
T ss_pred             CeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEEC---CCCCEEEeecccc
Confidence            99999999997 59999887653  599999999999999999999999999999999999995   6688999999999


Q ss_pred             cccCCc--ceeeccCccccCchhhcCCCC-CccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHh
Q 003239          264 CTEDRT--VYSYIQSRYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE  340 (837)
Q Consensus       264 ~~~~~~--~~~~~GT~~Y~APEvl~~~~y-t~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~  340 (837)
                      ......  .....+++.|+|||++.+..+ +.++|||||||++|+|++|..||......+....+.....          
T Consensus       159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~----------  228 (276)
T 2h6d_A          159 NMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVF----------  228 (276)
T ss_dssp             GCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC----------
T ss_pred             cccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcc----------
Confidence            765432  234578999999999988765 6899999999999999999999987765554443322000          


Q ss_pred             hhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhH
Q 003239          341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES  420 (837)
Q Consensus       341 ~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~  420 (837)
                                                                                     ..|             .
T Consensus       229 ---------------------------------------------------------------~~~-------------~  232 (276)
T 2h6d_A          229 ---------------------------------------------------------------YIP-------------E  232 (276)
T ss_dssp             ---------------------------------------------------------------CCC-------------T
T ss_pred             ---------------------------------------------------------------cCc-------------h
Confidence                                                                           000             0


Q ss_pred             HhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       421 ~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      ..+..+.+||.+||+.||++|||++|+|+||||++.
T Consensus       233 ~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          233 YLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             hcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence            123568899999999999999999999999999864


No 143
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=1.3e-41  Score=361.85  Aligned_cols=257  Identities=32%  Similarity=0.516  Sum_probs=214.3

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|+++++||+|+||+||+|++..+++.||||+++..   ....+.+.+|+++++++       .|+||+++++++...
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~   93 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL-------DHPNIMKLFEILEDS   93 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTC-------CCTTBCCEEEEEECS
T ss_pred             hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-------cCCCccEEEEEEeCC
Confidence            37999999999999999999999999999999999753   23456788999999988       689999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +..++|||++. ++|.+.+....  .+++..++.++.||+.||.|||++||+||||||+||+++.+.....+||+|||++
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~  171 (287)
T 2wei_A           94 SSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (287)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred             CeEEEEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence            99999999997 58888876553  6999999999999999999999999999999999999975555668999999998


Q ss_pred             cccCCc--ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          264 CTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       264 ~~~~~~--~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ......  .....+++.|+|||++.+ .++.++|||||||++|+|++|..||.+.+..+.+..+.....  +        
T Consensus       172 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~--------  240 (287)
T 2wei_A          172 TCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKY--A--------  240 (287)
T ss_dssp             GTBCCCSSCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC--C--------
T ss_pred             eeecCCCccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--C--------
Confidence            754332  234568999999999876 589999999999999999999999988877665554433100  0        


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                         +.                     ......
T Consensus       241 ---------------------------------------------------~~---------------------~~~~~~  248 (287)
T 2wei_A          241 ---------------------------------------------------FD---------------------LPQWRT  248 (287)
T ss_dssp             ---------------------------------------------------CC---------------------SGGGTT
T ss_pred             ---------------------------------------------------CC---------------------chhhhh
Confidence                                                               00                     000012


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      +++.+.+||++||..||++|||++|+|+||||++.
T Consensus       249 ~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          249 ISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             cCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            34678999999999999999999999999999864


No 144
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=3.6e-42  Score=377.16  Aligned_cols=197  Identities=29%  Similarity=0.503  Sum_probs=173.4

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh---------hHHHHHHHHHHHHHhhcccCCCCCCceeEE
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA---------YYQQALVEVSILTTLNKKYDREDKHHIVRI  177 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~---------~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl  177 (837)
                      ..++|+++++||+|+||+||+|++..+++.||||+++....         ..+.+.+|+.+|+.+       .|+||+++
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~Iv~~   94 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRV-------EHANIIKV   94 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTC-------CCTTBCCE
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhC-------CCCCEeeE
Confidence            34799999999999999999999999999999999986431         233566799999888       68999999


Q ss_pred             eEEEeecceEEEEEeccc-h-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeE
Q 003239          178 YEYFVCQRHLCICFELLD-S-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEI  255 (837)
Q Consensus       178 ~d~f~~~~~l~LVmEy~~-g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~I  255 (837)
                      +++|...+.+++||||+. + +|.+++...  ..+++..++.++.||+.||+|||++|||||||||+|||++   .++.+
T Consensus        95 ~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~  169 (335)
T 3dls_A           95 LDIFENQGFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTI  169 (335)
T ss_dssp             EEEEECSSEEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCE
T ss_pred             EEEEeeCCEEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEc---CCCcE
Confidence            999999999999999986 4 888888654  3599999999999999999999999999999999999995   67899


Q ss_pred             EEEecccccccCC--cceeeccCccccCchhhcCCCC-CccchHHHHHHHHHHHHhCCCCCCC
Q 003239          256 KIIDFGSACTEDR--TVYSYIQSRYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLGLPLFPG  315 (837)
Q Consensus       256 KL~DFGlA~~~~~--~~~~~~GT~~Y~APEvl~~~~y-t~ksDIWSLG~ILyELltG~~PF~g  315 (837)
                      ||+|||++.....  .....+||+.|+|||++.+..+ +.++|||||||++|+|++|..||..
T Consensus       170 kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  232 (335)
T 3dls_A          170 KLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE  232 (335)
T ss_dssp             EECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred             EEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence            9999999975543  3345689999999999998876 7899999999999999999999953


No 145
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=3.1e-41  Score=356.19  Aligned_cols=255  Identities=24%  Similarity=0.348  Sum_probs=210.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee-
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC-  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~-  183 (837)
                      .++|++++.||+|+||.||+|++..+++.||+|+++..   ....+.+.+|+.+++.+       .|+||+++++++.. 
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~   77 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL-------KHPNIVRYYDRIIDR   77 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEEEEG
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhc-------CCCCCCeEEEEEecC
Confidence            37999999999999999999999999999999999853   34556788999999998       58999999998864 


Q ss_pred             -cceEEEEEeccc-hhHHHHHHhhc--cCCCCHHHHHHHHHhHHHHHhhhhcCC-----eeeccCCCCCeeeeccCCCCe
Q 003239          184 -QRHLCICFELLD-SNLYELIKINH--FRGLSLSIVQLFSKQILRGLSLLKDAG-----IIHCDLKPENILLCTSVKPAE  254 (837)
Q Consensus       184 -~~~l~LVmEy~~-gsL~d~l~~~~--~~~L~e~~i~~I~~QIl~aL~yLHs~g-----IVHrDLKPeNILl~~~~~~~~  254 (837)
                       ...+++||||+. ++|.+++....  ...+++..++.++.||+.||+|||+++     |+||||||+|||++   .++.
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~---~~~~  154 (279)
T 2w5a_A           78 TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---GKQN  154 (279)
T ss_dssp             GGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEEC---SSSC
T ss_pred             CCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEc---CCCC
Confidence             568999999997 49999887643  234999999999999999999999999     99999999999995   6788


Q ss_pred             EEEEecccccccCCc---ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Q 003239          255 IKIIDFGSACTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGA  331 (837)
Q Consensus       255 IKL~DFGlA~~~~~~---~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~  331 (837)
                      +||+|||++......   .....+++.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+..... 
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~-  233 (279)
T 2w5a_A          155 VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKF-  233 (279)
T ss_dssp             EEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC-
T ss_pred             EEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccc-
Confidence            999999999755432   2345789999999999999999999999999999999999999988776555444432100 


Q ss_pred             CCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCC
Q 003239          332 QPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNL  411 (837)
Q Consensus       332 ~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l  411 (837)
                       +                                                                      ..|     
T Consensus       234 -~----------------------------------------------------------------------~~~-----  237 (279)
T 2w5a_A          234 -R----------------------------------------------------------------------RIP-----  237 (279)
T ss_dssp             -C----------------------------------------------------------------------CCC-----
T ss_pred             -c----------------------------------------------------------------------cCC-----
Confidence             0                                                                      000     


Q ss_pred             chhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          412 SMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       412 ~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                              ...++++.+||.+||..||++|||++|+|+|+|+.+..
T Consensus       238 --------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          238 --------YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             --------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             --------cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence                    01346789999999999999999999999999999754


No 146
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=4.1e-41  Score=360.46  Aligned_cols=252  Identities=25%  Similarity=0.431  Sum_probs=212.4

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      .++|++++.||+|+||+||+|++..+++.||||+++..  ....+.+.+|+.+++.+       .|+||+++++++...+
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~   93 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-------DSPYVTKYYGSYLKDT   93 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHC-------CCTTBCCEEEEEEETT
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhC-------CCCCEeEEEEEEecCC
Confidence            37899999999999999999999999999999999754  34467788999999988       6899999999999999


Q ss_pred             eEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .+|+||||+.+ +|.+++..   ..+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        94 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~~  167 (303)
T 3a7i_A           94 KLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAG  167 (303)
T ss_dssp             EEEEEEECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             eEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEEC---CCCCEEEeecccce
Confidence            99999999985 88887754   3599999999999999999999999999999999999995   66889999999996


Q ss_pred             ccCCc---ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          265 TEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       265 ~~~~~---~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      .....   .....+++.|+|||++.+..++.++|||||||++|+|++|..||......+....+.+..   ++       
T Consensus       168 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~-------  237 (303)
T 3a7i_A          168 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PP-------  237 (303)
T ss_dssp             ECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC---CC-------
T ss_pred             ecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCC---CC-------
Confidence            54332   234578999999999999999999999999999999999999998776554443322100   00       


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                   .                 .             ...
T Consensus       238 ---------------------------------------------~-----------------~-------------~~~  242 (303)
T 3a7i_A          238 ---------------------------------------------T-----------------L-------------EGN  242 (303)
T ss_dssp             ---------------------------------------------C-----------------C-------------CSS
T ss_pred             ---------------------------------------------C-----------------C-------------ccc
Confidence                                                         0                 0             001


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      ++..+.+||.+||..||++|||++|+|+||||....
T Consensus       243 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  278 (303)
T 3a7i_A          243 YSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA  278 (303)
T ss_dssp             CCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHC
T ss_pred             cCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCC
Confidence            346789999999999999999999999999997643


No 147
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=9.6e-42  Score=373.32  Aligned_cols=261  Identities=26%  Similarity=0.419  Sum_probs=184.2

Q ss_pred             CCceEEEE-EeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee---
Q 003239          108 QRRYIVKD-LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC---  183 (837)
Q Consensus       108 ~~~Y~i~~-~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~---  183 (837)
                      .++|++++ +||+|+||+||+|++..+++.||||++......    .+|+..+.++.      .|+||+++++++..   
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~e~~~~~~~~------~h~~i~~~~~~~~~~~~   96 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKA----RQEVDHHWQAS------GGPHIVCILDVYENMHH   96 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHH----HHHHHHHHHHT------TSTTBCCEEEEEEEEET
T ss_pred             cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHH----HHHHHHHHHhc------CCCChHHHHHHHhhccC
Confidence            47899965 699999999999999999999999999875432    23443332321      68999999999987   


Q ss_pred             -cceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          184 -QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       184 -~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                       ...++||||||.+ +|.+++.......+++.+++.++.||+.||.|||++||+||||||+|||++.+...+.+||+|||
T Consensus        97 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg  176 (336)
T 3fhr_A           97 GKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFG  176 (336)
T ss_dssp             TEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred             CCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccc
Confidence             5569999999975 99999987655679999999999999999999999999999999999999765557789999999


Q ss_pred             cccccCC-cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHh
Q 003239          262 SACTEDR-TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKE  340 (837)
Q Consensus       262 lA~~~~~-~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~  340 (837)
                      ++..... .....++|+.|+|||++.+..++.++|||||||++|+|++|..||...........+.....          
T Consensus       177 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~----------  246 (336)
T 3fhr_A          177 FAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR----------  246 (336)
T ss_dssp             TCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------------
T ss_pred             cceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhh----------
Confidence            9975543 23456789999999999888999999999999999999999999976543322111111000          


Q ss_pred             hhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhH
Q 003239          341 AKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKES  420 (837)
Q Consensus       341 ~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~  420 (837)
                                ..                                     ..            .++.         ....
T Consensus       247 ----------~~-------------------------------------~~------------~~~~---------~~~~  258 (336)
T 3fhr_A          247 ----------LG-------------------------------------QY------------GFPN---------PEWS  258 (336)
T ss_dssp             ---------------------------------------------------------------CCCT---------TTST
T ss_pred             ----------cc-------------------------------------cc------------ccCc---------hhhc
Confidence                      00                                     00            0000         0001


Q ss_pred             HhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          421 QIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       421 ~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                      .+++.+.+||++||+.||++|||++|+|+||||++.
T Consensus       259 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          259 EVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             TCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             cCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence            245778999999999999999999999999999874


No 148
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=3e-41  Score=358.54  Aligned_cols=189  Identities=34%  Similarity=0.501  Sum_probs=162.7

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee-----
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC-----  183 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~-----  183 (837)
                      ++|++++.||+|+||+||+|++..+++.||||+++......+.+.+|+.+++.+       .||||+++++++..     
T Consensus         6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~~~~~   78 (303)
T 1zy4_A            6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL-------NHQYVVRYYAAWLERRNFV   78 (303)
T ss_dssp             HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEEEECCCCC
T ss_pred             ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhc-------CchHHHHHHHHHHhhcchh
Confidence            689999999999999999999999999999999987766678888999999888       68999999998865     


Q ss_pred             --------cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCe
Q 003239          184 --------QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAE  254 (837)
Q Consensus       184 --------~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~  254 (837)
                              .+..|+||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.
T Consensus        79 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~---~~~~  154 (303)
T 1zy4_A           79 KPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID---ESRN  154 (303)
T ss_dssp             C------CEEEEEEEEECCCSCBHHHHHHHSC-GGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSC
T ss_pred             hhhcccccCCceEEEEecCCCCCHHHhhhccc-cccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEc---CCCC
Confidence                    467899999997 59999987643 4588999999999999999999999999999999999995   6788


Q ss_pred             EEEEecccccccCC-----------------cceeeccCccccCchhhcCC-CCCccchHHHHHHHHHHHHh
Q 003239          255 IKIIDFGSACTEDR-----------------TVYSYIQSRYYRSPEVLLGY-QYTTAIDMWSFGCIVAELFL  308 (837)
Q Consensus       255 IKL~DFGlA~~~~~-----------------~~~~~~GT~~Y~APEvl~~~-~yt~ksDIWSLG~ILyELlt  308 (837)
                      +||+|||++.....                 ......+++.|+|||++.+. .++.++|||||||++|+|++
T Consensus       155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~  226 (303)
T 1zy4_A          155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY  226 (303)
T ss_dssp             EEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred             EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence            99999999965432                 22345789999999999865 78999999999999999998


No 149
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=4e-41  Score=373.36  Aligned_cols=256  Identities=21%  Similarity=0.250  Sum_probs=211.3

Q ss_pred             CCceEEEEEeccCCceeEEEee-----ccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCW-----DAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~-----~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      .++|+++++||+|+||+||+|+     +..+++.||||+++..  ......+.+|+.+++.+       .|+||++++++
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~hpnIv~~~~~  142 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-------NHQNIVRCIGV  142 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEE
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhC-------CCCCCCeEEEE
Confidence            4789999999999999999998     5567889999999753  44556788899999998       68999999999


Q ss_pred             EeecceEEEEEeccc-hhHHHHHHhhcc-----CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCe
Q 003239          181 FVCQRHLCICFELLD-SNLYELIKINHF-----RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAE  254 (837)
Q Consensus       181 f~~~~~l~LVmEy~~-gsL~d~l~~~~~-----~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~  254 (837)
                      +......+||||||. ++|.+++.....     ..+++.+++.++.||+.||+|||++|||||||||+|||++.+.....
T Consensus       143 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~  222 (367)
T 3l9p_A          143 SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV  222 (367)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCC
T ss_pred             EecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCce
Confidence            999999999999996 599999887542     34899999999999999999999999999999999999975545567


Q ss_pred             EEEEeccccccc-----CCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHH
Q 003239          255 IKIIDFGSACTE-----DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRI  328 (837)
Q Consensus       255 IKL~DFGlA~~~-----~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I~~~  328 (837)
                      +||+|||+++..     ........+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+.+..+...
T Consensus       223 ~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~  302 (367)
T 3l9p_A          223 AKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG  302 (367)
T ss_dssp             EEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT
T ss_pred             EEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            999999999632     122334567899999999999999999999999999999998 99999888776655544331


Q ss_pred             hCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCC
Q 003239          329 LGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYR  408 (837)
Q Consensus       329 lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~  408 (837)
                      ....+                                                                           
T Consensus       303 ~~~~~---------------------------------------------------------------------------  307 (367)
T 3l9p_A          303 GRMDP---------------------------------------------------------------------------  307 (367)
T ss_dssp             CCCCC---------------------------------------------------------------------------
T ss_pred             CCCCC---------------------------------------------------------------------------
Confidence            10000                                                                           


Q ss_pred             CCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          409 KNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       409 ~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                                ...++..+.+||.+||+.||++|||++|+|+|.++..
T Consensus       308 ----------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~  344 (367)
T 3l9p_A          308 ----------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  344 (367)
T ss_dssp             ----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ----------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence                      0013367889999999999999999999999988764


No 150
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=4.9e-41  Score=360.30  Aligned_cols=203  Identities=29%  Similarity=0.397  Sum_probs=175.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC----ChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~----~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|++++.||+|+||+||+|++..+++.||||++..    .....+.+.+|+.+++.+       .||||+++++++..
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~hp~iv~~~~~~~~   82 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL-------SHQNIVSMIDVDEE   82 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC-------CBTTBCCEEEEEEC
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC-------CCCCCceEEEeeee
Confidence            3899999999999999999999999999999999864    234456788899998888       68999999999999


Q ss_pred             cceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+.+|+||||+.+ +|.+++...  +.+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||+
T Consensus        83 ~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~  157 (294)
T 4eqm_A           83 DDCYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID---SNKTLKIFDFGI  157 (294)
T ss_dssp             SSEEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCSS
T ss_pred             CCeEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEEeCCC
Confidence            9999999999975 899888765  3699999999999999999999999999999999999995   668899999999


Q ss_pred             ccccCCc----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 003239          263 ACTEDRT----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL  322 (837)
Q Consensus       263 A~~~~~~----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l  322 (837)
                      +......    ....+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+..
T Consensus       158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~  221 (294)
T 4eqm_A          158 AKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIA  221 (294)
T ss_dssp             STTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHH
T ss_pred             ccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence            9754332    23457899999999999999999999999999999999999999887765543


No 151
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=1.4e-40  Score=361.83  Aligned_cols=201  Identities=23%  Similarity=0.327  Sum_probs=174.8

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC  188 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~  188 (837)
                      ++|++.++||+|+||+||+|++..+++.||||++..... .+.+.+|+.+++.|.      .|+||+++++++...+..+
T Consensus         9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~E~~~l~~l~------~h~~i~~~~~~~~~~~~~~   81 (330)
T 2izr_A            9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-APQLHLEYRFYKQLG------SGDGIPQVYYFGPCGKYNA   81 (330)
T ss_dssp             TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-SCCHHHHHHHHHHHC------SCTTSCCEEEEEEETTEEE
T ss_pred             CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHhh------CCCCCCEEEEEEecCCccE
Confidence            789999999999999999999999999999999985432 345778999999994      5899999999999999999


Q ss_pred             EEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCC--CCeEEEEeccccccc
Q 003239          189 ICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK--PAEIKIIDFGSACTE  266 (837)
Q Consensus       189 LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~--~~~IKL~DFGlA~~~  266 (837)
                      |||||++++|.+++.... +.+++..++.++.||+.||+|||++|||||||||+|||++.+..  ...+||+|||++...
T Consensus        82 lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~  160 (330)
T 2izr_A           82 MVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY  160 (330)
T ss_dssp             EEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred             EEEEeCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence            999999889999988653 56999999999999999999999999999999999999963211  122999999999753


Q ss_pred             CCc----------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          267 DRT----------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       267 ~~~----------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                      ...          ....+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~  221 (330)
T 2izr_A          161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK  221 (330)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc
Confidence            221          235689999999999999999999999999999999999999998754


No 152
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=3.2e-40  Score=351.29  Aligned_cols=201  Identities=21%  Similarity=0.278  Sum_probs=175.6

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC  188 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~  188 (837)
                      ++|++.+.||+|+||+||+|++..+++.||||+++... ..+.+.+|+.+++.+.      .|+||+++++++......+
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~------~~~~i~~~~~~~~~~~~~~   82 (298)
T 1csn_A           10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLA------GCTGIPNVYYFGQEGLHNV   82 (298)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTT------TCTTCCCEEEEEEETTEEE
T ss_pred             cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHh------cCCCCCeEEeecCCCceeE
Confidence            78999999999999999999999999999999997543 2345778999999985      4789999999999999999


Q ss_pred             EEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeecc--CCCCeEEEEeccccccc
Q 003239          189 ICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS--VKPAEIKIIDFGSACTE  266 (837)
Q Consensus       189 LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~--~~~~~IKL~DFGlA~~~  266 (837)
                      +||||++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++.+  .....+||+|||++...
T Consensus        83 lv~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~  161 (298)
T 1csn_A           83 LVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFY  161 (298)
T ss_dssp             EEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEES
T ss_pred             EEEEecCCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccc
Confidence            999999889999987653 459999999999999999999999999999999999999643  12345999999999654


Q ss_pred             CCc----------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          267 DRT----------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       267 ~~~----------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                      ...          .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  222 (298)
T 1csn_A          162 RDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  222 (298)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             ccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhh
Confidence            321          234578999999999999999999999999999999999999998743


No 153
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=1e-40  Score=359.52  Aligned_cols=197  Identities=23%  Similarity=0.414  Sum_probs=168.4

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|++++.||+|+||.||+|++. +++.||||+++..   ....+.+.+|+.+++.+.+     .|+||+++++++...+
T Consensus        28 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~~~iv~~~~~~~~~~  101 (313)
T 3cek_A           28 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ-----HSDKIIRLYDYEITDQ  101 (313)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGG-----GCTTBCCEEEEEECSS
T ss_pred             ceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccc-----cCCceEEEEEEeecCC
Confidence            78999999999999999999885 4889999999743   3456778899999999965     3789999999999999


Q ss_pred             eEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       186 ~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      .+++|||+.+++|.+++...  ..+++..++.++.||+.||.|||+++|+||||||+|||++    ++.+||+|||++..
T Consensus       102 ~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----~~~~kL~Dfg~~~~  175 (313)
T 3cek_A          102 YIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQ  175 (313)
T ss_dssp             EEEEEECCCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSCC
T ss_pred             EEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE----CCeEEEeecccccc
Confidence            99999998888999998764  3699999999999999999999999999999999999995    37899999999975


Q ss_pred             cCCc-----ceeeccCccccCchhhcC-----------CCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          266 EDRT-----VYSYIQSRYYRSPEVLLG-----------YQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       266 ~~~~-----~~~~~GT~~Y~APEvl~~-----------~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                      ....     .....+++.|+|||++.+           ..++.++|||||||++|+|++|..||....
T Consensus       176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (313)
T 3cek_A          176 MQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  243 (313)
T ss_dssp             --------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             ccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence            4332     124578999999999976           468889999999999999999999997643


No 154
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=1.9e-41  Score=369.55  Aligned_cols=270  Identities=21%  Similarity=0.355  Sum_probs=211.5

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhh------------------HHHHHHHHHHHHHhhcccCCCC
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAY------------------YQQALVEVSILTTLNKKYDRED  170 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~------------------~~~~~~Ei~iL~~L~~~~~~~~  170 (837)
                      ++|++.+.||+|+||.||+|++  +++.||||++......                  .+.+.+|+.+++.+       .
T Consensus        31 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~  101 (348)
T 2pml_X           31 NDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI-------K  101 (348)
T ss_dssp             TTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC-------C
T ss_pred             CceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC-------C
Confidence            7999999999999999999988  8999999999743211                  17788999999888       6


Q ss_pred             CCceeEEeEEEeecceEEEEEeccch-hHHHH------HHhhccCCCCHHHHHHHHHhHHHHHhhhhc-CCeeeccCCCC
Q 003239          171 KHHIVRIYEYFVCQRHLCICFELLDS-NLYEL------IKINHFRGLSLSIVQLFSKQILRGLSLLKD-AGIIHCDLKPE  242 (837)
Q Consensus       171 HpnIVkl~d~f~~~~~l~LVmEy~~g-sL~d~------l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs-~gIVHrDLKPe  242 (837)
                      |+||+++++++...+..++||||+.+ +|.++      +.......+++..++.++.||+.||.|||+ +||+||||||+
T Consensus       102 h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~  181 (348)
T 2pml_X          102 NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPS  181 (348)
T ss_dssp             CTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGG
T ss_pred             CCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChH
Confidence            89999999999999999999999986 88877      544334679999999999999999999999 99999999999


Q ss_pred             CeeeeccCCCCeEEEEecccccccC-CcceeeccCccccCchhhcCC-CCCc-cchHHHHHHHHHHHHhCCCCCCCCCH-
Q 003239          243 NILLCTSVKPAEIKIIDFGSACTED-RTVYSYIQSRYYRSPEVLLGY-QYTT-AIDMWSFGCIVAELFLGLPLFPGASE-  318 (837)
Q Consensus       243 NILl~~~~~~~~IKL~DFGlA~~~~-~~~~~~~GT~~Y~APEvl~~~-~yt~-ksDIWSLG~ILyELltG~~PF~g~s~-  318 (837)
                      |||++   .++.+||+|||++.... .......++..|+|||++.+. .++. ++|||||||++|||++|..||..... 
T Consensus       182 Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  258 (348)
T 2pml_X          182 NILMD---KNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL  258 (348)
T ss_dssp             GEEEC---TTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS
T ss_pred             hEEEc---CCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence            99995   67899999999997643 334456789999999999887 6776 99999999999999999999987765 


Q ss_pred             HHHHHHHHHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccch
Q 003239          319 FDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHL  398 (837)
Q Consensus       319 ~e~l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L  398 (837)
                      .+.+..+.......|...        ..+..                                    +      +.....
T Consensus       259 ~~~~~~i~~~~~~~~~~~--------~~~~~------------------------------------~------~~~~~~  288 (348)
T 2pml_X          259 VELFNNIRTKNIEYPLDR--------NHFLY------------------------------------P------LTNKKS  288 (348)
T ss_dssp             HHHHHHHTSCCCCCCCSS--------SSSTT------------------------------------T------TCC---
T ss_pred             HHHHHHHhccCcCCccch--------hhhhc------------------------------------c------cccccc
Confidence            444443322100000000        00000                                    0      000000


Q ss_pred             HHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          399 EEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       399 ~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      .                 .....++..+.+||++||+.||++|||++|+|+||||++..
T Consensus       289 ~-----------------~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          289 T-----------------CSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             ----------------------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             c-----------------cchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence            0                 00122457899999999999999999999999999999855


No 155
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=9.8e-42  Score=363.35  Aligned_cols=264  Identities=24%  Similarity=0.396  Sum_probs=188.4

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      .++|++.+.||+|+||+||+|++..+++.||||++...  ....+.+.+|+.+++.+       .||||+++++++...+
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~   86 (303)
T 2vwi_A           14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC-------HHPNIVSYYTSFVVKD   86 (303)
T ss_dssp             CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCC-------CCTTBCCEEEEEESSS
T ss_pred             hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhc-------CCCCEeeEEEEEeecC
Confidence            47999999999999999999999999999999998753  23345566777776665       6899999999999999


Q ss_pred             eEEEEEeccc-hhHHHHHHhh------ccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEE
Q 003239          186 HLCICFELLD-SNLYELIKIN------HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII  258 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~------~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~  258 (837)
                      ..++||||+. ++|.+++...      ....+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~  163 (303)
T 2vwi_A           87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIA  163 (303)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTCCEEEC
T ss_pred             CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEc---CCCCEEEE
Confidence            9999999996 5888888642      224589999999999999999999999999999999999995   66889999


Q ss_pred             ecccccccCC--------cceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Q 003239          259 DFGSACTEDR--------TVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRIL  329 (837)
Q Consensus       259 DFGlA~~~~~--------~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~l  329 (837)
                      |||++.....        ......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||......+.+.....  
T Consensus       164 dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~--  241 (303)
T 2vwi_A          164 DFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQ--  241 (303)
T ss_dssp             CCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHT--
T ss_pred             eccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhc--
Confidence            9999864322        1234578999999999976 4789999999999999999999999987655443322211  


Q ss_pred             CCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCC
Q 003239          330 GAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRK  409 (837)
Q Consensus       330 G~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~  409 (837)
                      . .++..                     .                               .. ...   .+         
T Consensus       242 ~-~~~~~---------------------~-------------------------------~~-~~~---~~---------  255 (303)
T 2vwi_A          242 N-DPPSL---------------------E-------------------------------TG-VQD---KE---------  255 (303)
T ss_dssp             S-SCCCT---------------------T-------------------------------C---------C---------
T ss_pred             c-CCCcc---------------------c-------------------------------cc-ccc---ch---------
Confidence            0 00000                     0                               00 000   00         


Q ss_pred             CCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          410 NLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       410 ~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                              .....+..+.+||.+||..||++|||++|+|+||||++..
T Consensus       256 --------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          256 --------MLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             --------CCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             --------hhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence                    0011346789999999999999999999999999999754


No 156
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=3.7e-41  Score=365.54  Aligned_cols=249  Identities=24%  Similarity=0.424  Sum_probs=207.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh-------hHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA-------YYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~-------~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      .++|++.++||+|+||+||+|++..+++.||||+++....       ..+.+.+|+.+++.+.+     .|+||++++++
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~~~i~~~~~~  116 (320)
T 3a99_A           42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-----GFSGVIRLLDW  116 (320)
T ss_dssp             TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS-----SSCSBCCEEEE
T ss_pred             cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhcc-----CCCCceEEEEE
Confidence            3799999999999999999999999999999999975421       22456679999999964     57999999999


Q ss_pred             EeecceEEEEEeccc--hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEE
Q 003239          181 FVCQRHLCICFELLD--SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII  258 (837)
Q Consensus       181 f~~~~~l~LVmEy~~--gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~  258 (837)
                      +...+..++|||++.  ++|.+++...  ..+++..++.++.||+.||+|||+++|+||||||+|||++  ...+.+||+
T Consensus       117 ~~~~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~--~~~~~~kL~  192 (320)
T 3a99_A          117 FERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LNRGELKLI  192 (320)
T ss_dssp             EECSSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTTEEEEC
T ss_pred             EecCCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEe--CCCCCEEEe
Confidence            999999999999997  6899988764  3699999999999999999999999999999999999995  356789999


Q ss_pred             ecccccccCCc-ceeeccCccccCchhhcCCCC-CccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchH
Q 003239          259 DFGSACTEDRT-VYSYIQSRYYRSPEVLLGYQY-TTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDY  336 (837)
Q Consensus       259 DFGlA~~~~~~-~~~~~GT~~Y~APEvl~~~~y-t~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~  336 (837)
                      |||++...... .....+|+.|+|||++.+..+ +.++|||||||++|||++|+.||.....      +..  + ..   
T Consensus       193 Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~--~-~~---  260 (320)
T 3a99_A          193 DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIR--G-QV---  260 (320)
T ss_dssp             CCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHH--C-CC---
T ss_pred             eCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hhc--c-cc---
Confidence            99999765433 344578999999999987765 6889999999999999999999954210      100  0 00   


Q ss_pred             HHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhh
Q 003239          337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI  416 (837)
Q Consensus       337 ~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l  416 (837)
                                                                             .+            +          
T Consensus       261 -------------------------------------------------------~~------------~----------  263 (320)
T 3a99_A          261 -------------------------------------------------------FF------------R----------  263 (320)
T ss_dssp             -------------------------------------------------------CC------------S----------
T ss_pred             -------------------------------------------------------cc------------c----------
Confidence                                                                   00            0          


Q ss_pred             hhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       417 ~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                         ..+++++.+||++||+.||++|||++|+|+||||++..
T Consensus       264 ---~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          264 ---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             ---SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             ---ccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence               01346789999999999999999999999999999854


No 157
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=1.1e-40  Score=354.35  Aligned_cols=256  Identities=25%  Similarity=0.351  Sum_probs=201.5

Q ss_pred             ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEE
Q 003239          110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC  188 (837)
Q Consensus       110 ~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~  188 (837)
                      +|....+||+|+||+||+|++..+++.||||+++.. ....+.+.+|+.+++.+       .|+||+++++++...+..+
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~~~~~   95 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHL-------KHKNIVQYLGSFSENGFIK   95 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTC-------CCTTBCCEEEEEEETTEEE
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhC-------CCCCEeeEeeEEEeCCcEE
Confidence            344445899999999999999999999999999864 34456788899999988       6899999999999999999


Q ss_pred             EEEeccc-hhHHHHHHhhc-cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          189 ICFELLD-SNLYELIKINH-FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       189 LVmEy~~-gsL~d~l~~~~-~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      +||||+. ++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++  ..++.+||+|||++...
T Consensus        96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~--~~~~~~kl~Dfg~~~~~  173 (295)
T 2clq_A           96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLIN--TYSGVLKISDFGTSKRL  173 (295)
T ss_dssp             EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE--TTTCCEEECCTTTCEES
T ss_pred             EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEE--CCCCCEEEeeccccccc
Confidence            9999996 68888887653 23467999999999999999999999999999999999996  23678999999999754


Q ss_pred             CCc---ceeeccCccccCchhhcCCC--CCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          267 DRT---VYSYIQSRYYRSPEVLLGYQ--YTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       267 ~~~---~~~~~GT~~Y~APEvl~~~~--yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ...   .....+++.|+|||++.+..  ++.++|||||||++|+|++|+.||.................           
T Consensus       174 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-----------  242 (295)
T 2clq_A          174 AGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK-----------  242 (295)
T ss_dssp             CC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC-----------
T ss_pred             CCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc-----------
Confidence            322   33457899999999997653  88999999999999999999999965432221110000000           


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                                                                ..+                 ..             ...
T Consensus       243 ------------------------------------------~~~-----------------~~-------------~~~  250 (295)
T 2clq_A          243 ------------------------------------------VHP-----------------EI-------------PES  250 (295)
T ss_dssp             ------------------------------------------CCC-----------------CC-------------CTT
T ss_pred             ------------------------------------------ccc-----------------cc-------------ccc
Confidence                                                      000                 00             011


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      .++.+.+||.+||..||++|||++|+|+||||+...
T Consensus       251 ~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          251 MSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             SCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence            346789999999999999999999999999999754


No 158
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=1.5e-40  Score=352.09  Aligned_cols=207  Identities=20%  Similarity=0.301  Sum_probs=177.1

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|+++++||+|+||+||++.+. +++.||||+++......+.+.+|+++++.+       .|+||+++++++...+..
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~~~~   94 (283)
T 3gen_A           23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-------SHEKLVQLYGVCTKQRPI   94 (283)
T ss_dssp             GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTC-------CCTTBCCEEEEECSSSSE
T ss_pred             HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcC-------CCCCEeeEEEEEecCCCe
Confidence            379999999999999999999765 677899999997765667889999999998       589999999999999999


Q ss_pred             EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      ++||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++...
T Consensus        95 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~~  170 (283)
T 3gen_A           95 FIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSRYV  170 (283)
T ss_dssp             EEEECCCTTCBHHHHHHCGG-GCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTSCEEECSTTGGGGB
T ss_pred             EEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEc---CCCCEEEccccccccc
Confidence            99999996 58988887643 4699999999999999999999999999999999999995   6778999999999755


Q ss_pred             CCcc----eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 003239          267 DRTV----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMI  326 (837)
Q Consensus       267 ~~~~----~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I~  326 (837)
                      ....    ....+|+.|+|||++.+..++.++|||||||++|+|++ |+.||...+..+....+.
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~  235 (283)
T 3gen_A          171 LDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA  235 (283)
T ss_dssp             CCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred             cccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHh
Confidence            4322    22345678999999998899999999999999999998 999998877666555443


No 159
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.7e-40  Score=349.73  Aligned_cols=205  Identities=22%  Similarity=0.371  Sum_probs=179.2

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC  188 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~  188 (837)
                      ++|++++.||+|+||+||+|++. +++.||||+++......+.+.+|+++++++       .||||+++++++.+.+..|
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~~~~~   81 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-------SHPKLVQLYGVCLEQAPIC   81 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTC-------CCTTBCCEEEEECSSSSEE
T ss_pred             hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhC-------CCCCEeeEEEEEecCCceE
Confidence            78999999999999999999876 477799999997766667889999999998       5899999999999999999


Q ss_pred             EEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccccC
Q 003239          189 ICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED  267 (837)
Q Consensus       189 LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~~  267 (837)
                      +||||+.+ +|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++....
T Consensus        82 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~~  157 (269)
T 4hcu_A           82 LVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL  157 (269)
T ss_dssp             EEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---GGGCEEECCTTGGGGBC
T ss_pred             EEEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc---CCCCEEecccccccccc
Confidence            99999975 8888886543 4699999999999999999999999999999999999995   56789999999997554


Q ss_pred             Ccc----eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 003239          268 RTV----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM  325 (837)
Q Consensus       268 ~~~----~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I  325 (837)
                      ...    ....++..|+|||++.+..++.++|||||||++|+|++ |..||......+....+
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~  220 (269)
T 4hcu_A          158 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI  220 (269)
T ss_dssp             CHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred             ccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            322    23355778999999998899999999999999999999 99999887776655544


No 160
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=3e-40  Score=347.14  Aligned_cols=206  Identities=22%  Similarity=0.334  Sum_probs=178.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++++.||+|+||+||+|++. ++..||||+++......+.+.+|+++++.+       .||||+++++++...+..
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~~~~   78 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKL-------SHPKLVKFYGVCSKEYPI   78 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHC-------CCTTBCCEEEEECSSSSE
T ss_pred             hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhC-------CCCCEeeEEEEEccCCce
Confidence            379999999999999999999765 577899999997766667889999999999       589999999999999999


Q ss_pred             EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      ++||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++...
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~~~~~  154 (268)
T 3sxs_A           79 YIVTEYISNGCLLNYLRSHG-KGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVD---RDLCVKVSDFGMTRYV  154 (268)
T ss_dssp             EEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEEC---TTCCEEECCTTCEEEC
T ss_pred             EEEEEccCCCcHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEEC---CCCCEEEccCccceec
Confidence            99999997 57888887653 4599999999999999999999999999999999999995   6789999999999754


Q ss_pred             CCcce----eeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 003239          267 DRTVY----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM  325 (837)
Q Consensus       267 ~~~~~----~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I  325 (837)
                      .....    ...+|+.|+|||++.+..++.++|||||||++|+|++ |..||......+....+
T Consensus       155 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~  218 (268)
T 3sxs_A          155 LDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV  218 (268)
T ss_dssp             CTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH
T ss_pred             chhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHH
Confidence            43321    2344667999999999899999999999999999999 99999887766554443


No 161
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=1.5e-40  Score=357.07  Aligned_cols=254  Identities=25%  Similarity=0.353  Sum_probs=186.9

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHH-HHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVS-ILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~--~~~~~~~~Ei~-iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|++++.||+|+||+||+|++..+++.||||+++...  ....+...|+. +++.+       .|+||+++++++...+
T Consensus        25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~-------~h~~i~~~~~~~~~~~   97 (318)
T 2dyl_A           25 NDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSH-------DCPYIVQCFGTFITNT   97 (318)
T ss_dssp             GGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTT-------TCTTBCCEEEEEECSS
T ss_pred             ccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhc-------CCCceeeEEEEEecCC
Confidence            79999999999999999999999999999999998643  22233333433 33333       7899999999999999


Q ss_pred             eEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcC-CeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA-GIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~-gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .++|||||+++.+..+... ....+++..++.++.||+.||.|||++ ||+||||||+|||++   .++.+||+|||++.
T Consensus        98 ~~~lv~e~~~~~~~~l~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~  173 (318)
T 2dyl_A           98 DVFIAMELMGTCAEKLKKR-MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGQIKLCDFGISG  173 (318)
T ss_dssp             EEEEEECCCSEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEEC---TTSCEEECCCTTC-
T ss_pred             cEEEEEeccCCcHHHHHHH-hccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEEC---CCCCEEEEECCCch
Confidence            9999999996555555443 345699999999999999999999995 999999999999995   67889999999996


Q ss_pred             ccCC--cceeeccCccccCchhhc-----CCCCCccchHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHHHhCCCCchH
Q 003239          265 TEDR--TVYSYIQSRYYRSPEVLL-----GYQYTTAIDMWSFGCIVAELFLGLPLFPGA-SEFDLLRRMIRILGAQPPDY  336 (837)
Q Consensus       265 ~~~~--~~~~~~GT~~Y~APEvl~-----~~~yt~ksDIWSLG~ILyELltG~~PF~g~-s~~e~l~~I~~~lG~~Pp~~  336 (837)
                      ....  ......+++.|+|||++.     ...++.++|||||||++|+|++|+.||... ...+.+..+....   ++. 
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~---~~~-  249 (318)
T 2dyl_A          174 RLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE---PPL-  249 (318)
T ss_dssp             -------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC---CCC-
T ss_pred             hccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC---CCC-
Confidence            5432  233457899999999995     457889999999999999999999999763 3333333332210   000 


Q ss_pred             HHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhh
Q 003239          337 VLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDI  416 (837)
Q Consensus       337 ~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l  416 (837)
                                                                                          .|          
T Consensus       250 --------------------------------------------------------------------~~----------  251 (318)
T 2dyl_A          250 --------------------------------------------------------------------LP----------  251 (318)
T ss_dssp             --------------------------------------------------------------------CC----------
T ss_pred             --------------------------------------------------------------------CC----------
Confidence                                                                                00          


Q ss_pred             hhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCC
Q 003239          417 SKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGE  456 (837)
Q Consensus       417 ~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~  456 (837)
                       ....++..+.+||.+||..||.+|||++|+|+||||++.
T Consensus       252 -~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          252 -GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             -SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             -ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence             000134678999999999999999999999999999863


No 162
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=1.6e-40  Score=352.39  Aligned_cols=204  Identities=21%  Similarity=0.346  Sum_probs=182.6

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++.++||+|+||+||+|++..+++.||||+++.+....+.+.+|+++++.+       .|+||+++++++...+..
T Consensus        12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~~~~   84 (288)
T 3kfa_A           12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-------KHPNLVQLLGVCTREPPF   84 (288)
T ss_dssp             GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHC-------CCTTBCCEEEEECSSSSE
T ss_pred             ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhC-------CCCCEeeEEEEEccCCCE
Confidence            3789999999999999999999999999999999998777778899999999999       589999999999999999


Q ss_pred             EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      ++||||+. ++|.+++.......+++..++.++.||+.||+|||++||+||||||+||+++   .++.+||+|||++...
T Consensus        85 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~~~~~  161 (288)
T 3kfa_A           85 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSRLM  161 (288)
T ss_dssp             EEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC---GGGCEEECCCCGGGTS
T ss_pred             EEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc---CCCCEEEccCccceec
Confidence            99999998 6999999876666799999999999999999999999999999999999995   5678999999999765


Q ss_pred             CCcc----eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 003239          267 DRTV----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL  321 (837)
Q Consensus       267 ~~~~----~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~  321 (837)
                      ....    ....+++.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..+.
T Consensus       162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~  221 (288)
T 3kfa_A          162 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV  221 (288)
T ss_dssp             CSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGH
T ss_pred             cCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence            4322    22355778999999999999999999999999999999 9999987655443


No 163
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.3e-40  Score=364.49  Aligned_cols=204  Identities=27%  Similarity=0.393  Sum_probs=174.6

Q ss_pred             CCceEEEEEeccCCceeEEEee-----ccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCW-----DAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~-----~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      .++|++.++||+|+||.||+|+     +..+++.||||+++..  ....+.+.+|+++++.+.      .||||++++++
T Consensus        21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------~hpniv~~~~~   94 (359)
T 3vhe_A           21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG------HHLNVVNLLGA   94 (359)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC------CCTTBCCEEEE
T ss_pred             ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhc------CCcceeeeeee
Confidence            4899999999999999999998     6677899999999864  344567889999999995      58999999999


Q ss_pred             Eeecc-eEEEEEeccc-hhHHHHHHhhcc---------------------------------------------------
Q 003239          181 FVCQR-HLCICFELLD-SNLYELIKINHF---------------------------------------------------  207 (837)
Q Consensus       181 f~~~~-~l~LVmEy~~-gsL~d~l~~~~~---------------------------------------------------  207 (837)
                      +...+ .+++|||||. ++|.+++.....                                                   
T Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (359)
T 3vhe_A           95 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS  174 (359)
T ss_dssp             ECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred             eecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence            98865 4999999998 599999876532                                                   


Q ss_pred             -------------CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccccCCc-----
Q 003239          208 -------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRT-----  269 (837)
Q Consensus       208 -------------~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~~~~-----  269 (837)
                                   ..+++..++.++.||+.||+|||+++||||||||+|||++   .++.+||+|||++......     
T Consensus       175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~~~  251 (359)
T 3vhe_A          175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVR  251 (359)
T ss_dssp             ---------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCGGGSCTTSCTTCEE
T ss_pred             hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCcEEEEeccceeeecccccchh
Confidence                         1289999999999999999999999999999999999995   6678999999999754221     


Q ss_pred             ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 003239          270 VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD  320 (837)
Q Consensus       270 ~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e  320 (837)
                      .....+|+.|+|||++.+..++.++||||||||+|||++ |..||.+....+
T Consensus       252 ~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~  303 (359)
T 3vhe_A          252 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE  303 (359)
T ss_dssp             C--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred             ccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH
Confidence            233467889999999999999999999999999999998 999998765433


No 164
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=2.3e-40  Score=367.91  Aligned_cols=206  Identities=25%  Similarity=0.397  Sum_probs=176.4

Q ss_pred             CCceEEEEEeccCCceeEEEeecc-------CCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDA-------EMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIY  178 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~-------~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~  178 (837)
                      .++|++.+.||+|+||+||+|++.       .++..||||+++..  ....+.+.+|+.+|+.+.      .||||++++
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------~hpnIv~~~  153 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG------KHKNIINLL  153 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSC------CCTTBCCEE
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhc------CCCCEeeEE
Confidence            479999999999999999999754       35678999999864  345567889999999984      489999999


Q ss_pred             EEEeecceEEEEEeccc-hhHHHHHHhhcc--------------CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCC
Q 003239          179 EYFVCQRHLCICFELLD-SNLYELIKINHF--------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPEN  243 (837)
Q Consensus       179 d~f~~~~~l~LVmEy~~-gsL~d~l~~~~~--------------~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeN  243 (837)
                      +++...+.+|+||||+. ++|.+++.....              ..+++.+++.++.||+.||+|||++|||||||||+|
T Consensus       154 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  233 (370)
T 2psq_A          154 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  233 (370)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred             EEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhh
Confidence            99999999999999997 499999876531              348999999999999999999999999999999999


Q ss_pred             eeeeccCCCCeEEEEecccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCC
Q 003239          244 ILLCTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGAS  317 (837)
Q Consensus       244 ILl~~~~~~~~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s  317 (837)
                      ||++   .++.+||+|||++......     .....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus       234 Ill~---~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~  310 (370)
T 2psq_A          234 VLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP  310 (370)
T ss_dssp             EEEC---TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             EEEC---CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence            9995   6789999999999754322     223356788999999999999999999999999999999 999998765


Q ss_pred             HHHHH
Q 003239          318 EFDLL  322 (837)
Q Consensus       318 ~~e~l  322 (837)
                      ..+..
T Consensus       311 ~~~~~  315 (370)
T 2psq_A          311 VEELF  315 (370)
T ss_dssp             GGGHH
T ss_pred             HHHHH
Confidence            54443


No 165
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=2.7e-40  Score=357.94  Aligned_cols=252  Identities=24%  Similarity=0.272  Sum_probs=201.2

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ..+|++.++||+|+||+||+|++  +++.||||++...   ....+.+.+|+++|+++       .|+||+++++++...
T Consensus        36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~~  106 (309)
T 3p86_A           36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRL-------RHPNIVLFMGAVTQP  106 (309)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEECST
T ss_pred             hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhC-------CCCCEeeEEEEEEEC
Confidence            37999999999999999999965  5889999999754   34456788999999999       589999999999999


Q ss_pred             ceEEEEEeccch-hHHHHHHhhc-cCCCCHHHHHHHHHhHHHHHhhhhcCC--eeeccCCCCCeeeeccCCCCeEEEEec
Q 003239          185 RHLCICFELLDS-NLYELIKINH-FRGLSLSIVQLFSKQILRGLSLLKDAG--IIHCDLKPENILLCTSVKPAEIKIIDF  260 (837)
Q Consensus       185 ~~l~LVmEy~~g-sL~d~l~~~~-~~~L~e~~i~~I~~QIl~aL~yLHs~g--IVHrDLKPeNILl~~~~~~~~IKL~DF  260 (837)
                      +.+++||||+.+ +|.+++.... ...+++..++.++.||+.||+|||++|  ||||||||+|||++   .++.+||+||
T Consensus       107 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~---~~~~~kL~Df  183 (309)
T 3p86_A          107 PNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD---KKYTVKVCDF  183 (309)
T ss_dssp             TCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEEC---TTCCEEECCC
T ss_pred             CceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEe---CCCcEEECCC
Confidence            999999999974 8998887543 123899999999999999999999999  99999999999995   6789999999


Q ss_pred             ccccccCCc---ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHH
Q 003239          261 GSACTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV  337 (837)
Q Consensus       261 GlA~~~~~~---~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~  337 (837)
                      |+++.....   .....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+..+....+..... .+    
T Consensus       184 g~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-~~----  258 (309)
T 3p86_A          184 GLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK-RL----  258 (309)
T ss_dssp             C-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCC-CC----
T ss_pred             CCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-CC----
Confidence            999754332   3346789999999999999999999999999999999999999988776655444322100 00    


Q ss_pred             HHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhh
Q 003239          338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS  417 (837)
Q Consensus       338 l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~  417 (837)
                                                                                          +           
T Consensus       259 --------------------------------------------------------------------~-----------  259 (309)
T 3p86_A          259 --------------------------------------------------------------------E-----------  259 (309)
T ss_dssp             --------------------------------------------------------------------C-----------
T ss_pred             --------------------------------------------------------------------C-----------
Confidence                                                                                0           


Q ss_pred             hhHHhHHHHHHHHHHhcccCcCCCCCHHHHHc--CccCCC
Q 003239          418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASR--HPFVTG  455 (837)
Q Consensus       418 ~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~--HPff~~  455 (837)
                      ....+++.+.+||++||..||++|||++|+++  +++++.
T Consensus       260 ~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          260 IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            00113467899999999999999999999998  677765


No 166
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=1.4e-40  Score=359.45  Aligned_cols=255  Identities=20%  Similarity=0.293  Sum_probs=189.3

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCe---EEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNS---FVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~---~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      .++|++.+.||+|+||+||+|++..+++   .||||+++..   ....+.+.+|+++++.+       .|+||+++++++
T Consensus        22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~   94 (323)
T 3qup_A           22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF-------DHPHVAKLVGVS   94 (323)
T ss_dssp             ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTC-------CCTTBCCCCEEE
T ss_pred             hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHC-------CCCceehhhcee
Confidence            3789999999999999999999887765   8999999753   34567788999999888       689999999999


Q ss_pred             eecceE------EEEEeccch-hHHHHHHhhccC----CCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccC
Q 003239          182 VCQRHL------CICFELLDS-NLYELIKINHFR----GLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV  250 (837)
Q Consensus       182 ~~~~~l------~LVmEy~~g-sL~d~l~~~~~~----~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~  250 (837)
                      ......      ++||||+.+ +|.+++......    .+++..++.++.||+.||+|||++||+||||||+|||++   
T Consensus        95 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~---  171 (323)
T 3qup_A           95 LRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLA---  171 (323)
T ss_dssp             ECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---
T ss_pred             eccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEc---
Confidence            887655      999999985 898888765322    489999999999999999999999999999999999995   


Q ss_pred             CCCeEEEEecccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 003239          251 KPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR  324 (837)
Q Consensus       251 ~~~~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~  324 (837)
                      .++.+||+|||+++.....     .....+++.|+|||++.+..++.++|||||||++|||++ |.+||.+.+..+....
T Consensus       172 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~  251 (323)
T 3qup_A          172 EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNY  251 (323)
T ss_dssp             TTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH
T ss_pred             CCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHH
Confidence            6689999999999754322     123355778999999999999999999999999999999 9999987766554443


Q ss_pred             HHHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhc
Q 003239          325 MIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTN  404 (837)
Q Consensus       325 I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~  404 (837)
                      +.....  +                                                                       
T Consensus       252 ~~~~~~--~-----------------------------------------------------------------------  258 (323)
T 3qup_A          252 LIGGNR--L-----------------------------------------------------------------------  258 (323)
T ss_dssp             HHTTCC--C-----------------------------------------------------------------------
T ss_pred             HhcCCC--C-----------------------------------------------------------------------
Confidence            322000  0                                                                       


Q ss_pred             CCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCC-------HHHHHcCccCCCCC
Q 003239          405 YPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWS-------PFQASRHPFVTGEP  457 (837)
Q Consensus       405 ~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpT-------a~EaL~HPff~~~~  457 (837)
                       +           .....++.+.+||.+||+.||++|||       ++++++|||+....
T Consensus       259 -~-----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~  306 (323)
T 3qup_A          259 -K-----------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS  306 (323)
T ss_dssp             -C-----------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred             -C-----------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence             0           00113467899999999999999999       78899999999754


No 167
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=2.6e-40  Score=360.38  Aligned_cols=209  Identities=21%  Similarity=0.308  Sum_probs=177.5

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCC---eEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMN---SFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg---~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      ..++|++.++||+|+||+||+|++..++   ..||||+++..  ....+.+.+|+.+|+.+       .|+||+++++++
T Consensus        47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~  119 (325)
T 3kul_A           47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF-------DHPNIIRLEGVV  119 (325)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEE
T ss_pred             ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhC-------CCCCCCcEEEEE
Confidence            3489999999999999999999987554   45999999863  44556788999999888       689999999999


Q ss_pred             eecceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEec
Q 003239          182 VCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF  260 (837)
Q Consensus       182 ~~~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DF  260 (837)
                      ...+..||||||+.+ +|.+++.... ..+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+||
T Consensus       120 ~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Df  195 (325)
T 3kul_A          120 TRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD---SNLVCKVSDF  195 (325)
T ss_dssp             CGGGCCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCC
T ss_pred             EeCCccEEEeeCCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEC---CCCCEEECCC
Confidence            999999999999975 8888886543 4699999999999999999999999999999999999995   6789999999


Q ss_pred             ccccccCCcc------eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 003239          261 GSACTEDRTV------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMI  326 (837)
Q Consensus       261 GlA~~~~~~~------~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I~  326 (837)
                      |+++......      ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+....+....+.
T Consensus       196 g~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~  268 (325)
T 3kul_A          196 GLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE  268 (325)
T ss_dssp             SSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH
T ss_pred             CcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH
Confidence            9997553321      12245678999999998899999999999999999999 999998887766655443


No 168
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=1.3e-40  Score=358.27  Aligned_cols=197  Identities=24%  Similarity=0.401  Sum_probs=175.0

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC-ChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecce
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN-QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH  186 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~-~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~  186 (837)
                      .++|++.++||+|+||+||+|++..+++.||+|++.. .....+.+.+|+++++.+       .||||+++++++...+.
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~~~~   81 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-------EHPNVLKFIGVLYKDKR   81 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEEEETTE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-------CCcCcccEEEEEecCCe
Confidence            3799999999999999999999999999999999865 445667788999999888       68999999999999999


Q ss_pred             EEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          187 LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       187 l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      .++||||+.+ +|.+++.... ..+++.+++.++.||+.||+|||+++|+||||||+|||++   .++.+||+|||++..
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~~  157 (310)
T 3s95_A           82 LNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVR---ENKNVVVADFGLARL  157 (310)
T ss_dssp             EEEEEECCTTCBHHHHHHHCC-TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEC---TTSCEEECCCTTCEE
T ss_pred             eEEEEEecCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEEC---CCCCEEEeeccccee
Confidence            9999999975 8988887643 4699999999999999999999999999999999999995   678899999999965


Q ss_pred             cCCcc-----------------eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 003239          266 EDRTV-----------------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG  315 (837)
Q Consensus       266 ~~~~~-----------------~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g  315 (837)
                      .....                 ...+||+.|+|||++.+..++.++|||||||++|||++|..||..
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~  224 (310)
T 3s95_A          158 MVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD  224 (310)
T ss_dssp             CC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred             cccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence            43221                 145789999999999999999999999999999999999999854


No 169
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=1.4e-40  Score=361.29  Aligned_cols=195  Identities=27%  Similarity=0.313  Sum_probs=167.8

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc---
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR---  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~---  185 (837)
                      ++|++.++||+|+||+||+|++.  ++.||||+++..........+|+.+|+.+       .||||+++++++....   
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~~~~~~~~   94 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGM-------KHENILQFIGAEKRGTSVD   94 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTC-------CCTTBCCEEEEEEEECSSS
T ss_pred             hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcC-------CCCCchhhcceeccCCCCC
Confidence            79999999999999999999764  78999999987665556666788777776       6899999999998854   


Q ss_pred             -eEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcC----------CeeeccCCCCCeeeeccCCCC
Q 003239          186 -HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA----------GIIHCDLKPENILLCTSVKPA  253 (837)
Q Consensus       186 -~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~----------gIVHrDLKPeNILl~~~~~~~  253 (837)
                       .+|+|||||.+ +|.+++...   .+++..++.++.||+.||+|||+.          +||||||||+|||++   ..+
T Consensus        95 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~---~~~  168 (322)
T 3soc_A           95 VDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK---NNL  168 (322)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEEC---TTC
T ss_pred             ceEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEEC---CCC
Confidence             47999999975 999998764   499999999999999999999999          999999999999995   678


Q ss_pred             eEEEEecccccccCCc-----ceeeccCccccCchhhcCC-----CCCccchHHHHHHHHHHHHhCCCCCCCCCH
Q 003239          254 EIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGY-----QYTTAIDMWSFGCIVAELFLGLPLFPGASE  318 (837)
Q Consensus       254 ~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~-----~yt~ksDIWSLG~ILyELltG~~PF~g~s~  318 (837)
                      .+||+|||+++.....     ....++|+.|+|||++.+.     .++.++|||||||++|||++|+.||.+...
T Consensus       169 ~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~  243 (322)
T 3soc_A          169 TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVD  243 (322)
T ss_dssp             CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCC
T ss_pred             eEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcc
Confidence            9999999999654322     2235789999999999873     567789999999999999999999976543


No 170
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=6.8e-40  Score=348.43  Aligned_cols=201  Identities=25%  Similarity=0.301  Sum_probs=172.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++.+.||+|+||+||+|++..+++.||||++..... .+.+.+|+.+++.+.+      +++|..+..++...+..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~------~~~i~~~~~~~~~~~~~   80 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQG------GVGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-CCHHHHHHHHHHHHTT------STTCCCEEEEEEETTEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-hhHHHHHHHHHHHhhc------CCCCCccccccCCCCce
Confidence            3799999999999999999999999999999999975432 3457889999999953      34455555666777889


Q ss_pred             EEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccccC
Q 003239          188 CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED  267 (837)
Q Consensus       188 ~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~~  267 (837)
                      ++||||++++|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++.++..+.+||+|||++....
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           81 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEEEecCCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            9999999889999987543 469999999999999999999999999999999999999655567899999999996543


Q ss_pred             Cc----------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          268 RT----------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       268 ~~----------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                      ..          .....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence            22          23457899999999999999999999999999999999999999764


No 171
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=3.1e-40  Score=350.54  Aligned_cols=202  Identities=25%  Similarity=0.299  Sum_probs=169.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++.+.||+|+||+||+|++..+++.||||++..... .+.+.+|+.+++.+.+      +++|..+..++...+..
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~e~~~l~~l~~------~~~i~~~~~~~~~~~~~   80 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-HPQLHIESKIYKMMQG------GVGIPTIRWCGAEGDYN   80 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTT------STTCCCEEEEEEETTEE
T ss_pred             CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-chHHHHHHHHHHHhcC------CCCCCeeeeecCCCCce
Confidence            3799999999999999999999999999999999875432 2457789999999953      34566666666778899


Q ss_pred             EEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccccC
Q 003239          188 CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED  267 (837)
Q Consensus       188 ~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~~  267 (837)
                      ++||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++..+.+||+|||++....
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~  159 (296)
T 4hgt_A           81 VMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEEEECCCCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEEEccCCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence            9999999889999887543 469999999999999999999999999999999999999544577889999999996543


Q ss_pred             Cc----------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          268 RT----------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       268 ~~----------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                      ..          .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  219 (296)
T 4hgt_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLK  219 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             CcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccc
Confidence            22          234578999999999999999999999999999999999999997643


No 172
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=2.5e-40  Score=355.86  Aligned_cols=252  Identities=22%  Similarity=0.353  Sum_probs=198.0

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh-------hHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA-------YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~-------~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      ++|++.++||+|+||.||+|++..+++.||||+++....       ....+.+|+.+++++...   ..|+||+++++++
T Consensus        31 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~~h~~i~~~~~~~  107 (312)
T 2iwi_A           31 AEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAG---GGHPGVIRLLDWF  107 (312)
T ss_dssp             --CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSS---CCCSSBCCEEEEC
T ss_pred             hceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhccc---CCCCCeeeEEEEE
Confidence            789999999999999999999999999999999975432       223455799999998532   2689999999999


Q ss_pred             eecceEEEEEec-cc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          182 VCQRHLCICFEL-LD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       182 ~~~~~l~LVmEy-~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      ...+..++|||+ +. ++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++  ..++.+||+|
T Consensus       108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--~~~~~~kl~d  183 (312)
T 2iwi_A          108 ETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILID--LRRGCAKLID  183 (312)
T ss_dssp             -----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEE--TTTTEEEECC
T ss_pred             ecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEe--CCCCeEEEEE
Confidence            999999999999 54 69999887653  599999999999999999999999999999999999995  3567899999


Q ss_pred             cccccccCC-cceeeccCccccCchhhcCCCCC-ccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHH
Q 003239          260 FGSACTEDR-TVYSYIQSRYYRSPEVLLGYQYT-TAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYV  337 (837)
Q Consensus       260 FGlA~~~~~-~~~~~~GT~~Y~APEvl~~~~yt-~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~  337 (837)
                      ||++..... ......++..|+|||++.+..+. .++|||||||++|+|++|+.||....      .+....-       
T Consensus       184 fg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~-------  250 (312)
T 2iwi_A          184 FGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAEL-------  250 (312)
T ss_dssp             CSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCC-------
T ss_pred             cchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhcc-------
Confidence            999975543 33456789999999999877664 59999999999999999999995421      0110000       


Q ss_pred             HHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhh
Q 003239          338 LKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDIS  417 (837)
Q Consensus       338 l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~  417 (837)
                                                                                        .++           
T Consensus       251 ------------------------------------------------------------------~~~-----------  253 (312)
T 2iwi_A          251 ------------------------------------------------------------------HFP-----------  253 (312)
T ss_dssp             ------------------------------------------------------------------CCC-----------
T ss_pred             ------------------------------------------------------------------CCc-----------
Confidence                                                                              000           


Q ss_pred             hhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCCCC
Q 003239          418 KESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEPFT  459 (837)
Q Consensus       418 ~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~~~  459 (837)
                        ..++..+.+||.+||+.||++|||++|+|+||||+.....
T Consensus       254 --~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~~  293 (312)
T 2iwi_A          254 --AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAED  293 (312)
T ss_dssp             --TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC----
T ss_pred             --ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchhc
Confidence              0134678999999999999999999999999999986543


No 173
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.1e-39  Score=363.20  Aligned_cols=209  Identities=26%  Similarity=0.394  Sum_probs=179.4

Q ss_pred             CCceEEEEEeccCCceeEEEeeccC-------CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAE-------MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIY  178 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~-------tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~  178 (837)
                      .++|++.++||+|+||+||+|++..       .++.||||+++..  ....+.+.+|+++++.+.      .|+||++++
T Consensus        68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------~hpnIv~~~  141 (382)
T 3tt0_A           68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG------KHKNIINLL  141 (382)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC------CCTTBCCEE
T ss_pred             hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhc------CCchhhhhe
Confidence            4799999999999999999998643       3468999999864  344577889999999994      589999999


Q ss_pred             EEEeecceEEEEEeccch-hHHHHHHhhcc--------------CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCC
Q 003239          179 EYFVCQRHLCICFELLDS-NLYELIKINHF--------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPEN  243 (837)
Q Consensus       179 d~f~~~~~l~LVmEy~~g-sL~d~l~~~~~--------------~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeN  243 (837)
                      +++...+..||||||+.+ +|.+++.....              ..+++..++.++.||+.||+|||+++||||||||+|
T Consensus       142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  221 (382)
T 3tt0_A          142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN  221 (382)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred             eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcce
Confidence            999999999999999974 99999887542              359999999999999999999999999999999999


Q ss_pred             eeeeccCCCCeEEEEecccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCC
Q 003239          244 ILLCTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGAS  317 (837)
Q Consensus       244 ILl~~~~~~~~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s  317 (837)
                      |||+   .++.+||+|||+++.....     .....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.+
T Consensus       222 Ill~---~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~  298 (382)
T 3tt0_A          222 VLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP  298 (382)
T ss_dssp             EEEC---TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             EEEc---CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence            9995   6689999999999754322     223456788999999999999999999999999999999 999998877


Q ss_pred             HHHHHHHH
Q 003239          318 EFDLLRRM  325 (837)
Q Consensus       318 ~~e~l~~I  325 (837)
                      ..+....+
T Consensus       299 ~~~~~~~~  306 (382)
T 3tt0_A          299 VEELFKLL  306 (382)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            66554443


No 174
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=1.2e-39  Score=369.86  Aligned_cols=257  Identities=27%  Similarity=0.377  Sum_probs=196.3

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC  188 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~  188 (837)
                      +.|.+.++||+|+||+||.+ ...+++.||||++..+.  .+.+.+|+.+|+++.      .||||+++++++...+.+|
T Consensus        15 ~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~~--~~~~~~E~~~l~~l~------~HpnIv~~~~~~~~~~~~~   85 (434)
T 2rio_A           15 NLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDF--CDIALMEIKLLTESD------DHPNVIRYYCSETTDRFLY   85 (434)
T ss_dssp             SCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGGG--HHHHHHHHHHHHHHT------TSTTBCCEEEEEECSSEEE
T ss_pred             heeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHHH--HHHHHHHHHHHHhcc------CCCCcCeEEEEEecCCeEE
Confidence            67888899999999999875 45679999999997643  456788999998873      5899999999999999999


Q ss_pred             EEEeccchhHHHHHHhhccCC-----CCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeecc----------CCCC
Q 003239          189 ICFELLDSNLYELIKINHFRG-----LSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS----------VKPA  253 (837)
Q Consensus       189 LVmEy~~gsL~d~l~~~~~~~-----L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~----------~~~~  253 (837)
                      ||||||+++|.+++.......     .++..++.++.||+.||+|||++|||||||||+|||++.+          ....
T Consensus        86 lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~  165 (434)
T 2rio_A           86 IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENL  165 (434)
T ss_dssp             EEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred             EEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCce
Confidence            999999999999987653211     1333467899999999999999999999999999999743          2456


Q ss_pred             eEEEEecccccccCCc-------ceeeccCccccCchhhcC-------CCCCccchHHHHHHHHHHHHh-CCCCCCCCCH
Q 003239          254 EIKIIDFGSACTEDRT-------VYSYIQSRYYRSPEVLLG-------YQYTTAIDMWSFGCIVAELFL-GLPLFPGASE  318 (837)
Q Consensus       254 ~IKL~DFGlA~~~~~~-------~~~~~GT~~Y~APEvl~~-------~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~  318 (837)
                      .+||+|||++......       ....+||+.|+|||++.+       ..++.++||||||||+|||++ |..||.....
T Consensus       166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~  245 (434)
T 2rio_A          166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS  245 (434)
T ss_dssp             EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred             EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence            8999999999765432       224579999999999976       578999999999999999999 9999966533


Q ss_pred             HHHHHHHHHHhCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccch
Q 003239          319 FDLLRRMIRILGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHL  398 (837)
Q Consensus       319 ~e~l~~I~~~lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L  398 (837)
                      .+  ..+.....  .                    ...                                         +
T Consensus       246 ~~--~~i~~~~~--~--------------------~~~-----------------------------------------~  260 (434)
T 2rio_A          246 RE--SNIIRGIF--S--------------------LDE-----------------------------------------M  260 (434)
T ss_dssp             HH--HHHHHTCC--C--------------------CCC-----------------------------------------C
T ss_pred             hH--HHHhcCCC--C--------------------ccc-----------------------------------------c
Confidence            22  11111000  0                    000                                         0


Q ss_pred             HHHHhcCCCCCCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          399 EEIVTNYPYRKNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       399 ~~il~~~p~~~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                                .      ......+++++.+||.+||+.||++|||+.|+|+||||..
T Consensus       261 ----------~------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          261 ----------K------CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             ----------T------TCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             ----------c------ccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence                      0      0001235678999999999999999999999999999975


No 175
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=5.5e-40  Score=356.92  Aligned_cols=208  Identities=23%  Similarity=0.390  Sum_probs=178.3

Q ss_pred             CCceEEEEEeccCCceeEEEeecc-----CCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDA-----EMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~-----~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      .++|++++.||+|+||.||+|++.     .+++.||||+++..  ....+.+.+|+.+++.+       .||||++++++
T Consensus        46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~  118 (343)
T 1luf_A           46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-------DNPNIVKLLGV  118 (343)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTC-------CCTTBCCEEEE
T ss_pred             HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhC-------CCCCEEEEEEE
Confidence            479999999999999999999886     45689999999854  34456788999999998       68999999999


Q ss_pred             EeecceEEEEEeccch-hHHHHHHhhc----------------------cCCCCHHHHHHHHHhHHHHHhhhhcCCeeec
Q 003239          181 FVCQRHLCICFELLDS-NLYELIKINH----------------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHC  237 (837)
Q Consensus       181 f~~~~~l~LVmEy~~g-sL~d~l~~~~----------------------~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHr  237 (837)
                      +...+..||||||+.+ +|.+++....                      ...+++.+++.++.||+.||.|||++||+||
T Consensus       119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~  198 (343)
T 1luf_A          119 CAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHR  198 (343)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred             EccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence            9999999999999985 9999987642                      1469999999999999999999999999999


Q ss_pred             cCCCCCeeeeccCCCCeEEEEecccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCC
Q 003239          238 DLKPENILLCTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLP  311 (837)
Q Consensus       238 DLKPeNILl~~~~~~~~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~  311 (837)
                      ||||+|||++   .++.+||+|||++......     .....+|+.|+|||++.+..++.++|||||||++|||++ |..
T Consensus       199 Dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  275 (343)
T 1luf_A          199 DLATRNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ  275 (343)
T ss_dssp             CCSGGGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             CCCcceEEEC---CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCC
Confidence            9999999995   6678999999999654322     233467889999999999899999999999999999999 999


Q ss_pred             CCCCCCHHHHHHHH
Q 003239          312 LFPGASEFDLLRRM  325 (837)
Q Consensus       312 PF~g~s~~e~l~~I  325 (837)
                      ||.+.+..+....+
T Consensus       276 p~~~~~~~~~~~~~  289 (343)
T 1luf_A          276 PYYGMAHEEVIYYV  289 (343)
T ss_dssp             TTTTSCHHHHHHHH
T ss_pred             cCCCCChHHHHHHH
Confidence            99887766554443


No 176
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=4.9e-40  Score=352.48  Aligned_cols=204  Identities=26%  Similarity=0.424  Sum_probs=175.3

Q ss_pred             CCceEEEEEeccCCceeEEEeec-----cCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWD-----AEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~-----~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      .++|++.+.||+|+||.||+|++     ..+++.||||+++..  ....+.+.+|+++++.+       .||||++++++
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~   94 (314)
T 2ivs_A           22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV-------NHPHVIKLYGA   94 (314)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC-------CCTTBCCEEEE
T ss_pred             hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-------CCCceeeEEEE
Confidence            37999999999999999999986     345689999999853  34556788899999888       68999999999


Q ss_pred             EeecceEEEEEeccc-hhHHHHHHhhcc----------------------CCCCHHHHHHHHHhHHHHHhhhhcCCeeec
Q 003239          181 FVCQRHLCICFELLD-SNLYELIKINHF----------------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHC  237 (837)
Q Consensus       181 f~~~~~l~LVmEy~~-gsL~d~l~~~~~----------------------~~L~e~~i~~I~~QIl~aL~yLHs~gIVHr  237 (837)
                      +...+..++||||+. ++|.+++.....                      ..+++.+++.++.||+.||+|||++||+||
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~  174 (314)
T 2ivs_A           95 CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR  174 (314)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             EecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence            999999999999998 699999876532                      238999999999999999999999999999


Q ss_pred             cCCCCCeeeeccCCCCeEEEEecccccccCCcc-----eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCC
Q 003239          238 DLKPENILLCTSVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLP  311 (837)
Q Consensus       238 DLKPeNILl~~~~~~~~IKL~DFGlA~~~~~~~-----~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~  311 (837)
                      ||||+|||++   .++.+||+|||++.......     ....+++.|+|||++.+..++.++|||||||++|||++ |..
T Consensus       175 dikp~NIli~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  251 (314)
T 2ivs_A          175 DLAARNILVA---EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN  251 (314)
T ss_dssp             CCSGGGEEEE---TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             ccchheEEEc---CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999996   67889999999997543321     23356788999999999899999999999999999999 999


Q ss_pred             CCCCCCHHHH
Q 003239          312 LFPGASEFDL  321 (837)
Q Consensus       312 PF~g~s~~e~  321 (837)
                      ||.+....+.
T Consensus       252 p~~~~~~~~~  261 (314)
T 2ivs_A          252 PYPGIPPERL  261 (314)
T ss_dssp             SSTTCCGGGH
T ss_pred             CCCCCCHHHH
Confidence            9987655443


No 177
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=4.7e-40  Score=355.13  Aligned_cols=199  Identities=27%  Similarity=0.359  Sum_probs=158.9

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe-----
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV-----  182 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~-----  182 (837)
                      .+|++.++||+|+||+||+|++..+++.||||++... ....+.+.+|+.+++++.      +|+||+++++++.     
T Consensus        28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------~h~~iv~~~~~~~~~~~~  101 (337)
T 3ll6_A           28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS------GHPNIVQFCSAASIGKEE  101 (337)
T ss_dssp             EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHT------TSTTBCCEEEEEEECTTT
T ss_pred             ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhc------cCCChhhccccccccccc
Confidence            6899999999999999999999999999999998644 445667889999999994      4899999999994     


Q ss_pred             ---ecceEEEEEeccchhHHHHHHhhc-cCCCCHHHHHHHHHhHHHHHhhhhcCC--eeeccCCCCCeeeeccCCCCeEE
Q 003239          183 ---CQRHLCICFELLDSNLYELIKINH-FRGLSLSIVQLFSKQILRGLSLLKDAG--IIHCDLKPENILLCTSVKPAEIK  256 (837)
Q Consensus       183 ---~~~~l~LVmEy~~gsL~d~l~~~~-~~~L~e~~i~~I~~QIl~aL~yLHs~g--IVHrDLKPeNILl~~~~~~~~IK  256 (837)
                         ....+++||||+.|+|.+++.... ...+++..++.++.||+.||+|||+++  |+||||||+|||++   .++.+|
T Consensus       102 ~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~---~~~~~k  178 (337)
T 3ll6_A          102 SDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS---NQGTIK  178 (337)
T ss_dssp             STTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEEC---TTSCEE
T ss_pred             cccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEEC---CCCCEE
Confidence               345689999999999999887632 345999999999999999999999999  99999999999995   667899


Q ss_pred             EEecccccccCCcc---------------eeeccCccccCchhh---cCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          257 IIDFGSACTEDRTV---------------YSYIQSRYYRSPEVL---LGYQYTTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       257 L~DFGlA~~~~~~~---------------~~~~GT~~Y~APEvl---~~~~yt~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                      |+|||++.......               ....+|+.|+|||++   .+..++.++|||||||++|+|++|+.||...
T Consensus       179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~  256 (337)
T 3ll6_A          179 LCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDG  256 (337)
T ss_dssp             BCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             EecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcch
Confidence            99999997543321               144689999999999   4667899999999999999999999999653


No 178
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=1.8e-39  Score=358.55  Aligned_cols=205  Identities=16%  Similarity=0.187  Sum_probs=171.4

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCC-----CeEEEEEEEeCChhhHHHHHHHHHHHHHhhc--------ccCCCCCCc
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEM-----NSFVAVKIIKNQPAYYQQALVEVSILTTLNK--------KYDREDKHH  173 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~t-----g~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~--------~~~~~~Hpn  173 (837)
                      ..++|++.++||+|+||+||+|++..+     ++.||||++.....   ...+|+++++.+.+        ......|+|
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~  109 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNG---PLFTELKFYQRAAKPEQIQKWIRTRKLKYLG  109 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCH---HHHHHHHHHHHHCCHHHHHHHHHHTTCSCCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccch---hHHHHHHHHHhhhhhHHHHHHHHHhhccCCC
Confidence            347999999999999999999988664     57899999986542   45567777776654        123457999


Q ss_pred             eeEEeEEEeec----ceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeecc
Q 003239          174 IVRIYEYFVCQ----RHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS  249 (837)
Q Consensus       174 IVkl~d~f~~~----~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~  249 (837)
                      |+++++++...    .+.|||||||+++|.+++.... ..+++..++.|+.||+.||+|||+++||||||||+|||++.+
T Consensus       110 iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~  188 (364)
T 3op5_A          110 VPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANA-KRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK  188 (364)
T ss_dssp             SCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS
T ss_pred             CCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC
Confidence            99999999875    5689999999889999887643 569999999999999999999999999999999999999632


Q ss_pred             CCCCeEEEEecccccccCCc----------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          250 VKPAEIKIIDFGSACTEDRT----------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       250 ~~~~~IKL~DFGlA~~~~~~----------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                       ..+.+||+|||+++.....          ....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus       189 -~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~  264 (364)
T 3op5_A          189 -NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDN  264 (364)
T ss_dssp             -CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred             -CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence             5688999999999643321          12345999999999999999999999999999999999999999754


No 179
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=6.2e-40  Score=355.88  Aligned_cols=256  Identities=21%  Similarity=0.234  Sum_probs=206.8

Q ss_pred             CCceEEEEEeccCCceeEEEee-----ccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCW-----DAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~-----~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      .++|++++.||+|+||.||+|+     +..+++.||||++...  ......+.+|+.+++.+       .||||++++++
T Consensus        29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~  101 (327)
T 2yfx_A           29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKF-------NHQNIVRCIGV  101 (327)
T ss_dssp             GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEE
T ss_pred             hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhC-------CCCCCCeEEEE
Confidence            3799999999999999999998     5567889999999743  34556788899999998       68999999999


Q ss_pred             EeecceEEEEEeccc-hhHHHHHHhhcc-----CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCe
Q 003239          181 FVCQRHLCICFELLD-SNLYELIKINHF-----RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAE  254 (837)
Q Consensus       181 f~~~~~l~LVmEy~~-gsL~d~l~~~~~-----~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~  254 (837)
                      +...+..||||||+. ++|.+++.....     ..+++..++.++.||+.||.|||++||+||||||+|||++.+.....
T Consensus       102 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~  181 (327)
T 2yfx_A          102 SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRV  181 (327)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCC
T ss_pred             EcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcce
Confidence            999999999999996 699999887542     34899999999999999999999999999999999999975545668


Q ss_pred             EEEEecccccccCC-----cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHH
Q 003239          255 IKIIDFGSACTEDR-----TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMIRI  328 (837)
Q Consensus       255 IKL~DFGlA~~~~~-----~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I~~~  328 (837)
                      +||+|||++.....     ......+++.|+|||++.+..++.++|||||||++|+|++ |..||......+.+..+...
T Consensus       182 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~  261 (327)
T 2yfx_A          182 AKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSG  261 (327)
T ss_dssp             EEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTT
T ss_pred             EEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcC
Confidence            99999999864321     1233467889999999999899999999999999999998 99999887765554433221


Q ss_pred             hCCCCchHHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCC
Q 003239          329 LGAQPPDYVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYR  408 (837)
Q Consensus       329 lG~~Pp~~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~  408 (837)
                      ..  +                                                                        +  
T Consensus       262 ~~--~------------------------------------------------------------------------~--  265 (327)
T 2yfx_A          262 GR--M------------------------------------------------------------------------D--  265 (327)
T ss_dssp             CC--C------------------------------------------------------------------------C--
T ss_pred             CC--C------------------------------------------------------------------------C--
Confidence            00  0                                                                        0  


Q ss_pred             CCCchhhhhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCC
Q 003239          409 KNLSMEDISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTG  455 (837)
Q Consensus       409 ~~l~~e~l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~  455 (837)
                               ....++..+.+||.+||..||++|||++|+++|.|+..
T Consensus       266 ---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~  303 (327)
T 2yfx_A          266 ---------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT  303 (327)
T ss_dssp             ---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ---------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence                     00013467899999999999999999999999988754


No 180
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=4.2e-40  Score=366.18  Aligned_cols=205  Identities=25%  Similarity=0.407  Sum_probs=177.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      .++|++.+.||+|+||+||+|++..+++.||||+++..  ....+.+.+|+++|+.+       .||||+++++++...+
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~~~~~  185 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY-------SHPNIVRLIGVCTQKQ  185 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTC-------CCTTBCCEEEEECSSS
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhC-------CCCCEEEEEEEEecCC
Confidence            37899999999999999999999999999999999854  23345678899999888       6899999999999999


Q ss_pred             eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .+||||||+. ++|.+++.... ..+++..++.++.||+.||+|||+++||||||||+|||++   .++.+||+|||+++
T Consensus       186 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~---~~~~~kl~DfG~s~  261 (377)
T 3cbl_A          186 PIYIVMELVQGGDFLTFLRTEG-ARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKNVLKISDFGMSR  261 (377)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCGGGCE
T ss_pred             CcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEc---CCCcEEECcCCCce
Confidence            9999999997 68999887653 4599999999999999999999999999999999999995   67899999999997


Q ss_pred             ccCCccee-----eccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 003239          265 TEDRTVYS-----YIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR  323 (837)
Q Consensus       265 ~~~~~~~~-----~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~  323 (837)
                      ........     ..++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+...
T Consensus       262 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~  326 (377)
T 3cbl_A          262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTRE  326 (377)
T ss_dssp             ECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHH
T ss_pred             ecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            65433222     134667999999998899999999999999999998 999998877655443


No 181
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.1e-40  Score=376.47  Aligned_cols=199  Identities=25%  Similarity=0.259  Sum_probs=163.0

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC  188 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~  188 (837)
                      .+|++.++||+|+||+|+. ....+++.||||++.....  ..+.+|+++|+++.      .|||||++++++.+....|
T Consensus        24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~------~HpnIv~l~~~~~~~~~~~   94 (432)
T 3p23_A           24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF--SFADREVQLLRESD------EHPNVIRYFCTEKDRQFQY   94 (432)
T ss_dssp             EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE--EECHHHHHHHHHSC------CCTTBCCEEEEEEETTEEE
T ss_pred             EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhcc------CCCCcCeEEEEEecCCEEE
Confidence            5799999999999999764 3456789999999975432  23567999999884      5899999999999999999


Q ss_pred             EEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccC--CCCeEEEEeccccccc
Q 003239          189 ICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSV--KPAEIKIIDFGSACTE  266 (837)
Q Consensus       189 LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~--~~~~IKL~DFGlA~~~  266 (837)
                      ||||||.++|.+++.... ..+.+..++.++.||+.||+|||++|||||||||+|||++.++  ....+||+|||++...
T Consensus        95 lv~E~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A           95 IAIELCAATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             EEEECCSEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred             EEEECCCCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence            999999999999988654 3355666789999999999999999999999999999996432  3346889999999754


Q ss_pred             CC------cceeeccCccccCchhhcC---CCCCccchHHHHHHHHHHHHh-CCCCCCCCC
Q 003239          267 DR------TVYSYIQSRYYRSPEVLLG---YQYTTAIDMWSFGCIVAELFL-GLPLFPGAS  317 (837)
Q Consensus       267 ~~------~~~~~~GT~~Y~APEvl~~---~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s  317 (837)
                      ..      .....+||+.|+|||++.+   ..++.++||||||||+|||++ |.+||....
T Consensus       174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~  234 (432)
T 3p23_A          174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL  234 (432)
T ss_dssp             ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT
T ss_pred             cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh
Confidence            32      2334679999999999984   567889999999999999999 999995543


No 182
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=2.8e-40  Score=358.25  Aligned_cols=200  Identities=26%  Similarity=0.372  Sum_probs=151.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      .++|++++.||+|+||.||+|.+..+++.||||+++..  .........|+..+.+      ...|+||+++++++...+
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~------~~~h~niv~~~~~~~~~~   94 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMR------SSDCPYIVQFYGALFREG   94 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHS------SCCCTTBCCEEEEEECSS
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHH------cCCCCcEeeeeeEEEeCC
Confidence            48999999999999999999999999999999999864  2333445555553222      227999999999999999


Q ss_pred             eEEEEEeccchhHHHHHHhh---ccCCCCHHHHHHHHHhHHHHHhhhhcC-CeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          186 HLCICFELLDSNLYELIKIN---HFRGLSLSIVQLFSKQILRGLSLLKDA-GIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       186 ~l~LVmEy~~gsL~d~l~~~---~~~~L~e~~i~~I~~QIl~aL~yLHs~-gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      ..+|||||+.++|.+++...   ....+++..++.++.||+.||.|||++ ||+||||||+|||++   .++.+||+|||
T Consensus        95 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg  171 (327)
T 3aln_A           95 DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD---RSGNIKLCDFG  171 (327)
T ss_dssp             EEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE---TTTEEEECCCS
T ss_pred             ceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc---CCCCEEEccCC
Confidence            99999999999888877642   235699999999999999999999998 999999999999996   67899999999


Q ss_pred             cccccCCc--ceeeccCccccCchhh----cCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          262 SACTEDRT--VYSYIQSRYYRSPEVL----LGYQYTTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       262 lA~~~~~~--~~~~~GT~~Y~APEvl----~~~~yt~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                      ++......  .....+|+.|+|||++    .+..++.++|||||||++|+|++|+.||...
T Consensus       172 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  232 (327)
T 3aln_A          172 ISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW  232 (327)
T ss_dssp             SSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC
T ss_pred             CceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            99765432  2334789999999999    4557899999999999999999999999764


No 183
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1.3e-39  Score=341.06  Aligned_cols=205  Identities=22%  Similarity=0.357  Sum_probs=178.9

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC  188 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~  188 (837)
                      ++|++.+.||+|+||.||+|++. +++.||||+++......+.+.+|+++++.+       .||||+++++++...+..+
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~~   79 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL-------SHPKLVQLYGVCLEQAPIC   79 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTC-------CCTTBCCEEEEECSSSSCE
T ss_pred             hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhC-------CCCCEeeEEEEEccCCCeE
Confidence            78999999999999999999876 577899999997665667889999999988       5899999999999999999


Q ss_pred             EEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccccC
Q 003239          189 ICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED  267 (837)
Q Consensus       189 LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~~  267 (837)
                      +||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||++....
T Consensus        80 lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~~~~~  155 (267)
T 3t9t_A           80 LVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVL  155 (267)
T ss_dssp             EEECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---GGGCEEECCTTGGGGBC
T ss_pred             EEEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC---CCCCEEEcccccccccc
Confidence            9999997 58988887653 4689999999999999999999999999999999999995   56789999999997554


Q ss_pred             Ccc----eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 003239          268 RTV----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM  325 (837)
Q Consensus       268 ~~~----~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I  325 (837)
                      ...    ....++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+
T Consensus       156 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i  218 (267)
T 3t9t_A          156 DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI  218 (267)
T ss_dssp             CHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred             cccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHH
Confidence            321    23356778999999998899999999999999999999 89999887766554443


No 184
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=1.4e-39  Score=345.49  Aligned_cols=200  Identities=24%  Similarity=0.344  Sum_probs=171.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh----h----HHHHHHHHHHHHHhhcccCCCCCCceeEEeE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA----Y----YQQALVEVSILTTLNKKYDREDKHHIVRIYE  179 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~----~----~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d  179 (837)
                      .++|++.+.||+|+||+||+|++..+++.||||++.....    .    .+.+.+|+.+++.+       .|+||+++++
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~   90 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL-------NHPNIVKLYG   90 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTC-------CCTTBCCEEE
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhC-------CCCCchhhhe
Confidence            3799999999999999999999999999999999864321    1    15678899999888       6899999999


Q ss_pred             EEeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCC--eeeccCCCCCeeeeccC--CCCe
Q 003239          180 YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG--IIHCDLKPENILLCTSV--KPAE  254 (837)
Q Consensus       180 ~f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~g--IVHrDLKPeNILl~~~~--~~~~  254 (837)
                      ++....  ++||||+. ++|.+.+.... ..+++..++.++.||+.||+|||+++  |+||||||+|||++.+.  ....
T Consensus        91 ~~~~~~--~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~  167 (287)
T 4f0f_A           91 LMHNPP--RMVMEFVPCGDLYHRLLDKA-HPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVC  167 (287)
T ss_dssp             EETTTT--EEEEECCTTCBHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCC
T ss_pred             eecCCC--eEEEEecCCCCHHHHHhccc-CCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCcee
Confidence            987665  79999998 68888886553 56999999999999999999999999  99999999999996321  1224


Q ss_pred             EEEEecccccccCCcceeeccCccccCchhhc--CCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          255 IKIIDFGSACTEDRTVYSYIQSRYYRSPEVLL--GYQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       255 IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~--~~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                      +||+|||++...........+|+.|+|||++.  ...++.++|||||||++|||++|+.||....
T Consensus       168 ~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~  232 (287)
T 4f0f_A          168 AKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYS  232 (287)
T ss_dssp             EEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             EEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCcccc
Confidence            99999999987777777788999999999994  4468899999999999999999999997654


No 185
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=2.6e-39  Score=346.71  Aligned_cols=203  Identities=27%  Similarity=0.378  Sum_probs=176.0

Q ss_pred             CceEEEEEeccCCceeEEEee-----ccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCW-----DAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~-----~~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      ++|++.+.||+|+||+||+|+     +..+++.||||+++...  ...+.+.+|+.+++++.      .||||+++++++
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------~h~~i~~~~~~~   96 (313)
T 1t46_A           23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG------NHMNIVNLLGAC   96 (313)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC------CCTTBCCEEEEE
T ss_pred             hhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcc------cCCCeeeEEEEE
Confidence            799999999999999999997     45678899999998542  34577889999999994      589999999999


Q ss_pred             eecceEEEEEeccc-hhHHHHHHhhcc----------------CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCe
Q 003239          182 VCQRHLCICFELLD-SNLYELIKINHF----------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENI  244 (837)
Q Consensus       182 ~~~~~l~LVmEy~~-gsL~d~l~~~~~----------------~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNI  244 (837)
                      ...+..++||||+. ++|.+++.....                ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Ni  176 (313)
T 1t46_A           97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI  176 (313)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceE
Confidence            99999999999997 499999876542                2489999999999999999999999999999999999


Q ss_pred             eeeccCCCCeEEEEecccccccCCcc-----eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCH
Q 003239          245 LLCTSVKPAEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASE  318 (837)
Q Consensus       245 Ll~~~~~~~~IKL~DFGlA~~~~~~~-----~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~  318 (837)
                      |++   .++.+||+|||++.......     ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus       177 l~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  253 (313)
T 1t46_A          177 LLT---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV  253 (313)
T ss_dssp             EEE---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred             EEc---CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc
Confidence            996   67899999999997554322     23356788999999999999999999999999999998 9999977654


Q ss_pred             HH
Q 003239          319 FD  320 (837)
Q Consensus       319 ~e  320 (837)
                      .+
T Consensus       254 ~~  255 (313)
T 1t46_A          254 DS  255 (313)
T ss_dssp             SH
T ss_pred             hh
Confidence            33


No 186
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=4.7e-40  Score=368.12  Aligned_cols=201  Identities=22%  Similarity=0.399  Sum_probs=173.2

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      .++|++.++||+|+||+||+|++..+++.||||+++...  ...+.+.+|+++|+.+       .|+||+++++++...+
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~hpnIv~~~~~~~~~~   80 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL-------NHKNIVKLFAIEEETT   80 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHC-------CCTTBCCEEEEEECTT
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhc-------CCCCCCeEEEeeccCC
Confidence            479999999999999999999999999999999998532  3356778899999999       5899999999998765


Q ss_pred             --eEEEEEeccc-hhHHHHHHhhcc-CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeec-cCCCCeEEEEec
Q 003239          186 --HLCICFELLD-SNLYELIKINHF-RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCT-SVKPAEIKIIDF  260 (837)
Q Consensus       186 --~l~LVmEy~~-gsL~d~l~~~~~-~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~-~~~~~~IKL~DF  260 (837)
                        ..|||||||. ++|.+++..... ..+++..++.++.||+.||+|||++|||||||||+|||+.. ++..+.+||+||
T Consensus        81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DF  160 (396)
T 4eut_A           81 TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF  160 (396)
T ss_dssp             TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCG
T ss_pred             CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecC
Confidence              7899999997 589888876432 23999999999999999999999999999999999999832 235677999999


Q ss_pred             ccccccCCc--ceeeccCccccCchhhcC--------CCCCccchHHHHHHHHHHHHhCCCCCCC
Q 003239          261 GSACTEDRT--VYSYIQSRYYRSPEVLLG--------YQYTTAIDMWSFGCIVAELFLGLPLFPG  315 (837)
Q Consensus       261 GlA~~~~~~--~~~~~GT~~Y~APEvl~~--------~~yt~ksDIWSLG~ILyELltG~~PF~g  315 (837)
                      |+++.....  ....+||+.|+|||++.+        ..++.++|||||||++|||++|+.||..
T Consensus       161 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~  225 (396)
T 4eut_A          161 GAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP  225 (396)
T ss_dssp             GGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEEC
T ss_pred             CCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            999765432  335678999999999875        5688899999999999999999999964


No 187
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=1.2e-39  Score=342.60  Aligned_cols=203  Identities=27%  Similarity=0.450  Sum_probs=163.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-----hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-----AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-----~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      .++|++.++||+|+||+||+|++.  ++.||||+++...     ...+.+.+|+++++.+       .|+||+++++++.
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~~   76 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAML-------KHPNIIALRGVCL   76 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHC-------CCTTBCCEEEEEC
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhc-------CCCCEeeEEEEEe
Confidence            379999999999999999999764  8899999987532     2346788899999998       5899999999999


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCC---eeeccCCCCCeeeeccC-----CCC
Q 003239          183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG---IIHCDLKPENILLCTSV-----KPA  253 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~g---IVHrDLKPeNILl~~~~-----~~~  253 (837)
                      ..+..++||||+. ++|.+++..   +.+++..++.++.||+.||+|||+++   |+||||||+|||++...     ..+
T Consensus        77 ~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~  153 (271)
T 3dtc_A           77 KEPNLCLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNK  153 (271)
T ss_dssp             CC--CEEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSC
T ss_pred             cCCceEEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCc
Confidence            9999999999997 577777643   46999999999999999999999999   99999999999996322     267


Q ss_pred             eEEEEecccccccCCc-ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHH
Q 003239          254 EIKIIDFGSACTEDRT-VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLL  322 (837)
Q Consensus       254 ~IKL~DFGlA~~~~~~-~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l  322 (837)
                      .+||+|||++...... .....+|+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.....
T Consensus       154 ~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~  223 (271)
T 3dtc_A          154 ILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVA  223 (271)
T ss_dssp             CEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHH
T ss_pred             ceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            8999999999754332 33457899999999999989999999999999999999999999877655443


No 188
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=1.1e-39  Score=346.18  Aligned_cols=202  Identities=23%  Similarity=0.340  Sum_probs=171.5

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCC-------eEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMN-------SFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYE  179 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg-------~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d  179 (837)
                      .++|++.+.||+|+||+||+|++..++       +.||+|+++.. ....+.+.+|+.+++.+       .|+||+++++
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~   79 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL-------SHKHLVLNYG   79 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTS-------CCTTBCCEEE
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhC-------CCCCEeEEEE
Confidence            479999999999999999999988777       57999999754 34567788999999998       5899999999


Q ss_pred             EEeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCC-----CC
Q 003239          180 YFVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK-----PA  253 (837)
Q Consensus       180 ~f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~-----~~  253 (837)
                      ++...+..++||||+. ++|.+++.... ..+++..++.++.||+.||.|||+++|+||||||+|||++.+..     ..
T Consensus        80 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~  158 (289)
T 4fvq_A           80 VCVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPP  158 (289)
T ss_dssp             EECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCC
T ss_pred             EEEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccc
Confidence            9999999999999998 59999887654 34999999999999999999999999999999999999973321     12


Q ss_pred             eEEEEecccccccCCcceeeccCccccCchhhcC-CCCCccchHHHHHHHHHHHHhC-CCCCCCCCH
Q 003239          254 EIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLG-YQYTTAIDMWSFGCIVAELFLG-LPLFPGASE  318 (837)
Q Consensus       254 ~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~-~~yt~ksDIWSLG~ILyELltG-~~PF~g~s~  318 (837)
                      .+||+|||++...... ....+|..|+|||++.+ ..++.++|||||||++|||++| .+||.....
T Consensus       159 ~~kl~Dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~  224 (289)
T 4fvq_A          159 FIKLSDPGISITVLPK-DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS  224 (289)
T ss_dssp             EEEECCCCSCTTTSCH-HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred             eeeeccCcccccccCc-cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch
Confidence            2999999999655433 34567899999999988 6799999999999999999995 555554443


No 189
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=1.5e-39  Score=345.03  Aligned_cols=205  Identities=24%  Similarity=0.385  Sum_probs=165.1

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCC---CeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEM---NSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~t---g~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      .++|++.++||+|+||+||+|++..+   +..||||+++..  ....+.+.+|+.+++.+       .||||+++++++.
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~   86 (281)
T 1mp8_A           14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-------DHPHIVKLIGVIT   86 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTC-------CCTTBCCEEEEEC
T ss_pred             hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhC-------CCCccceEEEEEc
Confidence            37999999999999999999987653   567999998753  34456788899999888       6899999999984


Q ss_pred             ecceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 CQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 ~~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                       ++..|+||||+.+ +|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||
T Consensus        87 -~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg  161 (281)
T 1mp8_A           87 -ENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFG  161 (281)
T ss_dssp             -SSSCEEEEECCTTEEHHHHHHHTT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECC--
T ss_pred             -cCccEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEEC---CCCCEEECccc
Confidence             5678999999985 8988887553 4699999999999999999999999999999999999996   56899999999


Q ss_pred             cccccCCc----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 003239          262 SACTEDRT----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR  324 (837)
Q Consensus       262 lA~~~~~~----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~  324 (837)
                      ++......    .....+++.|+|||++.+..++.++|||||||++|||++ |.+||.+....+.+..
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~  229 (281)
T 1mp8_A          162 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGR  229 (281)
T ss_dssp             -----------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH
T ss_pred             cccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHH
Confidence            99755332    123356778999999998899999999999999999997 9999987765554443


No 190
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.7e-39  Score=346.58  Aligned_cols=197  Identities=26%  Similarity=0.402  Sum_probs=169.1

Q ss_pred             CCceEEEEEeccCCceeEEEee----ccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCW----DAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~----~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      .++|+++++||+|+||+||+|+    +..+++.||||+++.. ....+.+.+|+++++.+       .|+||+++++++.
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~   81 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-------QHDNIVKYKGVCY   81 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTC-------CCTTBCCEEEEEC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhC-------CCCCEeeEEEEEe
Confidence            4899999999999999999998    6778999999999864 34456788999999998       5899999999987


Q ss_pred             ec--ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          183 CQ--RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       183 ~~--~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      ..  ..+++||||+. ++|.+++.... ..+++..++.++.||+.||+|||+++|+||||||+|||++   .++.+||+|
T Consensus        82 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~~~kl~D  157 (295)
T 3ugc_A           82 SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGD  157 (295)
T ss_dssp             HHHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECC
T ss_pred             cCCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEc---CCCeEEEcc
Confidence            64  46899999996 59999887654 3599999999999999999999999999999999999996   568899999


Q ss_pred             cccccccCCc------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 003239          260 FGSACTEDRT------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG  315 (837)
Q Consensus       260 FGlA~~~~~~------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g  315 (837)
                      ||++......      .....++..|+|||++.+..++.++|||||||++|||++|..||..
T Consensus       158 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~  219 (295)
T 3ugc_A          158 FGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS  219 (295)
T ss_dssp             CCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred             CcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCC
Confidence            9999754322      1223467779999999999999999999999999999999999854


No 191
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=1.1e-39  Score=376.64  Aligned_cols=205  Identities=21%  Similarity=0.357  Sum_probs=181.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      ..+|++.++||+|+||+||+|++..+++.||||+++......+.+.+|+.+|+++       .||||+++++++...+.+
T Consensus       219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~l~~~~~~~~~~  291 (495)
T 1opk_A          219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-------KHPNLVQLLGVCTREPPF  291 (495)
T ss_dssp             GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHC-------CCTTBCCEEEEECSSSSC
T ss_pred             HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhc-------CCCCEeeEEEEEecCCcE
Confidence            3689999999999999999999999999999999987766678899999999999       689999999999999999


Q ss_pred             EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      |||||||. ++|.+++.......+++..++.++.||+.||+|||+++||||||||+|||++   .++.+||+|||+++..
T Consensus       292 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~  368 (495)
T 1opk_A          292 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG---ENHLVKVADFGLSRLM  368 (495)
T ss_dssp             EEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---GGGCEEECCTTCEECC
T ss_pred             EEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC---CCCcEEEeecccceec
Confidence            99999998 6999999876556799999999999999999999999999999999999995   6688999999999765


Q ss_pred             CCcce----eeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 003239          267 DRTVY----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLL  322 (837)
Q Consensus       267 ~~~~~----~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l  322 (837)
                      .....    ...++..|+|||++....++.++|||||||+||||++ |..||.+.+..+..
T Consensus       369 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~  429 (495)
T 1opk_A          369 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY  429 (495)
T ss_dssp             TTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH
T ss_pred             cCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            43221    2244678999999999899999999999999999999 99999877654433


No 192
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=2.6e-39  Score=368.72  Aligned_cols=203  Identities=25%  Similarity=0.365  Sum_probs=174.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc-e
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR-H  186 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~-~  186 (837)
                      .++|++.++||+|+||+||++.+.  ++.||||+++... ..+.+.+|+.+|+++       .|+||+++++++...+ .
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l-------~h~niv~~~~~~~~~~~~  261 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQL-------RHSNLVQLLGVIVEEKGG  261 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-TSHHHHHHHHHHHTC-------CCTTBCCEEEEEECTTSC
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-HHHHHHHHHHHHHhc-------cCCCEEEEEEEEEcCCCc
Confidence            478999999999999999999764  7899999998654 457788999999998       6899999999987765 7


Q ss_pred             EEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          187 LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       187 l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      +|||||||. ++|.+++.......+++..++.++.||+.||+|||+++||||||||+|||++   .++.+||+|||+++.
T Consensus       262 ~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~  338 (450)
T 1k9a_A          262 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKE  338 (450)
T ss_dssp             EEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTSCEEECCCTTCEE
T ss_pred             eEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEC---CCCCEEEeeCCCccc
Confidence            999999997 5999999876545589999999999999999999999999999999999995   678999999999986


Q ss_pred             cCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 003239          266 EDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR  323 (837)
Q Consensus       266 ~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~  323 (837)
                      .........++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+.+.
T Consensus       339 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~  397 (450)
T 1k9a_A          339 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP  397 (450)
T ss_dssp             CC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHH
T ss_pred             ccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            6554445567889999999999999999999999999999998 999998765544443


No 193
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=1.2e-39  Score=351.61  Aligned_cols=207  Identities=25%  Similarity=0.345  Sum_probs=176.4

Q ss_pred             CceEEEEEeccCCceeEEEeecc-----CCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDA-----EMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~-----~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      ++|++.+.||+|+||.||+|++.     .+++.||||+++...  .....+.+|+.+++.+       .|+||+++++++
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~   97 (322)
T 1p4o_A           25 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-------NCHHVVRLLGVV   97 (322)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC-------CCTTBCCEEEEE
T ss_pred             hheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc-------CCCCEeeeEEEE
Confidence            78999999999999999999876     467899999997542  3445678899998888       689999999999


Q ss_pred             eecceEEEEEeccc-hhHHHHHHhhc--------cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCC
Q 003239          182 VCQRHLCICFELLD-SNLYELIKINH--------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKP  252 (837)
Q Consensus       182 ~~~~~l~LVmEy~~-gsL~d~l~~~~--------~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~  252 (837)
                      ...+..++||||+. ++|.+++....        ...+++..++.++.||+.||.|||++||+||||||+|||++   .+
T Consensus        98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~---~~  174 (322)
T 1p4o_A           98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---ED  174 (322)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC---TT
T ss_pred             ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEc---CC
Confidence            99999999999997 59999887543        13579999999999999999999999999999999999995   66


Q ss_pred             CeEEEEecccccccCCcc-----eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 003239          253 AEIKIIDFGSACTEDRTV-----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM  325 (837)
Q Consensus       253 ~~IKL~DFGlA~~~~~~~-----~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I  325 (837)
                      +.+||+|||++.......     ....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+
T Consensus       175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  253 (322)
T 1p4o_A          175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV  253 (322)
T ss_dssp             CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHH
T ss_pred             CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHH
Confidence            899999999997543221     23356788999999999899999999999999999999 89999887765554433


No 194
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=4.3e-39  Score=339.76  Aligned_cols=192  Identities=27%  Similarity=0.353  Sum_probs=171.2

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee-----
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC-----  183 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~-----  183 (837)
                      .+|++++.||+|+||.||+|++..+++.||||+++...   +.+.+|+++++.+       .|+||+++++++..     
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l-------~h~~i~~~~~~~~~~~~~~   80 (284)
T 2a19_B           11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKL-------DHVNIVHYNGCWDGFDYDP   80 (284)
T ss_dssp             HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHC-------CCTTBCCEEEEEEEEEEC-
T ss_pred             cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhC-------CCCCEEEEeeeEeccccCc
Confidence            78999999999999999999999999999999998654   3456899999998       68999999999865     


Q ss_pred             -----------cceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCC
Q 003239          184 -----------QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK  251 (837)
Q Consensus       184 -----------~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~  251 (837)
                                 ...+++||||+.+ +|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++   .
T Consensus        81 ~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~  157 (284)
T 2a19_B           81 ETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV---D  157 (284)
T ss_dssp             --------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---E
T ss_pred             ccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEc---C
Confidence                       4568999999985 999999876656799999999999999999999999999999999999996   6


Q ss_pred             CCeEEEEecccccccCC--cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCC
Q 003239          252 PAEIKIIDFGSACTEDR--TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF  313 (837)
Q Consensus       252 ~~~IKL~DFGlA~~~~~--~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF  313 (837)
                      ++.+||+|||++.....  ......+++.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       158 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~  221 (284)
T 2a19_B          158 TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA  221 (284)
T ss_dssp             TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSH
T ss_pred             CCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcc
Confidence            67899999999875433  234457899999999999999999999999999999999998877


No 195
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=1.5e-39  Score=351.62  Aligned_cols=255  Identities=24%  Similarity=0.308  Sum_probs=201.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC---ChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN---QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~---~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|++.++||+|+||+||+|++..   .+|+|+++.   .....+.+.+|+++|+.+       .|+||+++++++. .
T Consensus        35 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~-~  103 (307)
T 3lb7_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKT-------RHVNILLFMGYMT-K  103 (307)
T ss_dssp             TTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEEC-S
T ss_pred             ccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhC-------CCCCEEEEEEEEc-c
Confidence            3799999999999999999997654   488888874   344567788899999888       6899999999765 5


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +.+++||||+. ++|.+++.... ..+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||++
T Consensus       104 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~DFg~a  179 (307)
T 3lb7_A          104 DNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLTVKIGDFGLA  179 (307)
T ss_dssp             SSCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEEC---TTSCEEECCCCSS
T ss_pred             CcEEEEEecCCCCcHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEc---CCCCEEEccCCCc
Confidence            56899999998 58888876543 5699999999999999999999999999999999999995   6789999999999


Q ss_pred             cccC-----CcceeeccCccccCchhhc---CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCch
Q 003239          264 CTED-----RTVYSYIQSRYYRSPEVLL---GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPD  335 (837)
Q Consensus       264 ~~~~-----~~~~~~~GT~~Y~APEvl~---~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~  335 (837)
                      ....     .......||+.|+|||++.   +..++.++|||||||++|||++|+.||...+..+.+..++.... .++.
T Consensus       180 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~-~~~~  258 (307)
T 3lb7_A          180 TVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGY-ASPD  258 (307)
T ss_dssp             CC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTC-CCCC
T ss_pred             eecccccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCC-CCcc
Confidence            6432     2233457899999999997   55789999999999999999999999987766555444333211 0000


Q ss_pred             HHHHhhhcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhh
Q 003239          336 YVLKEAKNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMED  415 (837)
Q Consensus       336 ~~l~~~k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~  415 (837)
                                                                                    +.++.             
T Consensus       259 --------------------------------------------------------------~~~~~-------------  263 (307)
T 3lb7_A          259 --------------------------------------------------------------LSKLY-------------  263 (307)
T ss_dssp             --------------------------------------------------------------STTSC-------------
T ss_pred             --------------------------------------------------------------hhhhh-------------
Confidence                                                                          00000             


Q ss_pred             hhhhHHhHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          416 ISKESQIRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       416 l~~~~~~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                          ..+++.+.+||.+||..||++|||+.|++++.+.-...
T Consensus       264 ----~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~  301 (307)
T 3lb7_A          264 ----KNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS  301 (307)
T ss_dssp             ----SSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred             ----cCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence                01346789999999999999999999999988766544


No 196
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=2.5e-39  Score=347.12  Aligned_cols=243  Identities=26%  Similarity=0.395  Sum_probs=191.1

Q ss_pred             CCceEEE-EEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee---
Q 003239          108 QRRYIVK-DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC---  183 (837)
Q Consensus       108 ~~~Y~i~-~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~---  183 (837)
                      .++|.++ +.||+|+||.||+|++..+++.||||+++..    ....+|+.++.++.      .|+||+++++++..   
T Consensus        16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~------~h~~i~~~~~~~~~~~~   85 (299)
T 3m2w_A           16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRAS------QCPHIVRIVDVYENLYA   85 (299)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHT------TSTTBCCEEEEEEEEET
T ss_pred             ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhc------cCCCchhHHhhhhhhcC
Confidence            3678887 7899999999999999999999999999864    34567888886553      68999999999987   


Q ss_pred             -cceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          184 -QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       184 -~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                       ...++|||||+.+ +|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.....+.+||+|||
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg  165 (299)
T 3m2w_A           86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFG  165 (299)
T ss_dssp             TEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred             CCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence             7789999999975 99999987655579999999999999999999999999999999999999754447899999999


Q ss_pred             cccccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCchHHHHhh
Q 003239          262 SACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMIRILGAQPPDYVLKEA  341 (837)
Q Consensus       262 lA~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~~~lG~~Pp~~~l~~~  341 (837)
                      ++....                   +..++.++|||||||++|||++|..||......+....+..              
T Consensus       166 ~a~~~~-------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~--------------  212 (299)
T 3m2w_A          166 FAKETT-------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT--------------  212 (299)
T ss_dssp             TCEECT-------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCC--------------
T ss_pred             cccccc-------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHH--------------
Confidence            985432                   24678899999999999999999999976543221000000              


Q ss_pred             hcchhhhhhcCCcccccCCccccCCccchhhhhHHHHHHHhhcCCcCCcccccccchHHHHhcCCCCCCCchhhhhhhHH
Q 003239          342 KNTSKFFKCIGSVHNIENGEVSIGGRSAYQALTEIEYEARELKKPLIGKEYFHHKHLEEIVTNYPYRKNLSMEDISKESQ  421 (837)
Q Consensus       342 k~~~~~f~~~~~l~~~~~~~~~i~~~~~y~~~s~~~~~~~~~~~p~~~~~~f~~~~L~~il~~~p~~~~l~~e~l~~~~~  421 (837)
                              ..      .        ..                     ...+            |         ......
T Consensus       213 --------~~------~--------~~---------------------~~~~------------~---------~~~~~~  228 (299)
T 3m2w_A          213 --------RI------R--------MG---------------------QYEF------------P---------NPEWSE  228 (299)
T ss_dssp             --------SS------C--------TT---------------------CCSS------------C---------HHHHTT
T ss_pred             --------HH------h--------hc---------------------cccC------------C---------chhccc
Confidence                    00      0        00                     0000            0         001122


Q ss_pred             hHHHHHHHHHHhcccCcCCCCCHHHHHcCccCCCCC
Q 003239          422 IRLALVDFLKGLVEFDPAKRWSPFQASRHPFVTGEP  457 (837)
Q Consensus       422 ~s~~l~DLL~kmL~~DP~kRpTa~EaL~HPff~~~~  457 (837)
                      +++++.+||.+||+.||++|||++|+|+||||++..
T Consensus       229 ~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          229 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             CCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence            457899999999999999999999999999998754


No 197
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=3.2e-39  Score=353.95  Aligned_cols=198  Identities=16%  Similarity=0.200  Sum_probs=159.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccC---CCeEEEEEEEeCChhhH------------HHHHHHHHHHHHhhcccCCCCCC
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAE---MNSFVAVKIIKNQPAYY------------QQALVEVSILTTLNKKYDREDKH  172 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~---tg~~VAIKiik~~~~~~------------~~~~~Ei~iL~~L~~~~~~~~Hp  172 (837)
                      .++|++.++||+|+||+||+|++..   +++.||||++.......            ..+.+|+.+++.+       .|+
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l-------~h~  108 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQL-------DYL  108 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTC-------SCC
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccc-------ccc
Confidence            4799999999999999999999887   78899999998653211            1123344444444       799


Q ss_pred             ceeEEeEEEee----cceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeec
Q 003239          173 HIVRIYEYFVC----QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCT  248 (837)
Q Consensus       173 nIVkl~d~f~~----~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~  248 (837)
                      ||+++++++..    ....||||||++++|.+++....  .+++..++.++.||+.||+|||+++|+||||||+|||++.
T Consensus       109 ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~  186 (345)
T 2v62_A          109 GIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGY  186 (345)
T ss_dssp             CCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEES
T ss_pred             CcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEcc
Confidence            99999999988    78999999999889999887654  6999999999999999999999999999999999999973


Q ss_pred             cCCCCeEEEEecccccccCCc----------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 003239          249 SVKPAEIKIIDFGSACTEDRT----------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG  315 (837)
Q Consensus       249 ~~~~~~IKL~DFGlA~~~~~~----------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g  315 (837)
                      + ..+.+||+|||+++.....          .....+|+.|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus       187 ~-~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~  262 (345)
T 2v62_A          187 K-NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQ  262 (345)
T ss_dssp             S-STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGG
T ss_pred             C-CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence            2 2238999999999654221          1345789999999999999999999999999999999999999965


No 198
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.3e-39  Score=352.97  Aligned_cols=204  Identities=24%  Similarity=0.383  Sum_probs=172.8

Q ss_pred             CCceEEEEEeccCCceeEEEeec-----cCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWD-----AEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~-----~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      .++|++.+.||+|+||+||+|++     ..+++.||||+++..  ....+.+.+|+.+|+.+.      .||||++++++
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------~hp~iv~~~~~  117 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG------SHENIVNLLGA  117 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC------CCTTBCCEEEE
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhc------CCCCeeeEEEE
Confidence            47999999999999999999986     346778999999753  234567889999999994      58999999999


Q ss_pred             EeecceEEEEEeccc-hhHHHHHHhhcc---------------------CCCCHHHHHHHHHhHHHHHhhhhcCCeeecc
Q 003239          181 FVCQRHLCICFELLD-SNLYELIKINHF---------------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCD  238 (837)
Q Consensus       181 f~~~~~l~LVmEy~~-gsL~d~l~~~~~---------------------~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrD  238 (837)
                      +...+..+|||||+. ++|.+++.....                     ..+++..++.++.||+.||+|||++||+|||
T Consensus       118 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~D  197 (344)
T 1rjb_A          118 CTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRD  197 (344)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred             EeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence            999999999999997 599999876532                     2379999999999999999999999999999


Q ss_pred             CCCCCeeeeccCCCCeEEEEecccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCC
Q 003239          239 LKPENILLCTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPL  312 (837)
Q Consensus       239 LKPeNILl~~~~~~~~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~P  312 (837)
                      |||+|||++   .++.+||+|||++......     .....+|+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus       198 ikp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p  274 (344)
T 1rjb_A          198 LAARNVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP  274 (344)
T ss_dssp             CSGGGEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCS
T ss_pred             CChhhEEEc---CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCC
Confidence            999999996   6789999999999654322     123456788999999999999999999999999999998 9999


Q ss_pred             CCCCCHHH
Q 003239          313 FPGASEFD  320 (837)
Q Consensus       313 F~g~s~~e  320 (837)
                      |.+....+
T Consensus       275 ~~~~~~~~  282 (344)
T 1rjb_A          275 YPGIPVDA  282 (344)
T ss_dssp             STTCCCSH
T ss_pred             cccCCcHH
Confidence            98765433


No 199
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=6.1e-39  Score=349.50  Aligned_cols=209  Identities=24%  Similarity=0.398  Sum_probs=176.9

Q ss_pred             CCceEEEEEeccCCceeEEEeecc-------CCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDA-------EMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIY  178 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~-------~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~  178 (837)
                      .++|++.+.||+|+||+||+|++.       .+++.||||+++..  ....+.+.+|+++++.+.      .||||++++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------~hp~iv~~~  107 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG------KHKNIINLL  107 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHC------CCTTBCCEE
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhh------cCCCEeeEE
Confidence            379999999999999999999865       45778999999854  345567889999999994      589999999


Q ss_pred             EEEeecceEEEEEeccch-hHHHHHHhhcc--------------CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCC
Q 003239          179 EYFVCQRHLCICFELLDS-NLYELIKINHF--------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPEN  243 (837)
Q Consensus       179 d~f~~~~~l~LVmEy~~g-sL~d~l~~~~~--------------~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeN  243 (837)
                      +++...+.+++||||+.+ +|.+++.....              ..+++..++.++.||+.||+|||++||+||||||+|
T Consensus       108 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N  187 (334)
T 2pvf_A          108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN  187 (334)
T ss_dssp             EEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred             EEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccce
Confidence            999999999999999974 99999876531              248999999999999999999999999999999999


Q ss_pred             eeeeccCCCCeEEEEecccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCC
Q 003239          244 ILLCTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGAS  317 (837)
Q Consensus       244 ILl~~~~~~~~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s  317 (837)
                      ||++   .++.+||+|||++......     .....+++.|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus       188 Ill~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~  264 (334)
T 2pvf_A          188 VLVT---ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP  264 (334)
T ss_dssp             EEEC---TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             EEEc---CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC
Confidence            9995   6788999999999755432     123356788999999998899999999999999999999 999998877


Q ss_pred             HHHHHHHH
Q 003239          318 EFDLLRRM  325 (837)
Q Consensus       318 ~~e~l~~I  325 (837)
                      ..+....+
T Consensus       265 ~~~~~~~~  272 (334)
T 2pvf_A          265 VEELFKLL  272 (334)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            65554443


No 200
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=2.1e-39  Score=352.87  Aligned_cols=202  Identities=24%  Similarity=0.391  Sum_probs=165.1

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeE----EEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSF----VAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~----VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      .++|+++++||+|+||+||+|++..+++.    ||+|+++..  ....+.+.+|+.+++.+       .||||+++++++
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~   86 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGIC   86 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHC-------CBTTBCCEEEEE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhC-------CCCCEeEEEEEE
Confidence            37899999999999999999998877765    477776532  23456788999999999       689999999999


Q ss_pred             eecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEec
Q 003239          182 VCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF  260 (837)
Q Consensus       182 ~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DF  260 (837)
                      .... .++|+|++. ++|.+++.... ..+++..++.++.||+.||+|||+++||||||||+|||++   .++.+||+||
T Consensus        87 ~~~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Df  161 (327)
T 3poz_A           87 LTST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDF  161 (327)
T ss_dssp             ESSS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCT
T ss_pred             ecCC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEEC---CCCCEEEccC
Confidence            8765 778888887 68998887653 4699999999999999999999999999999999999996   6688999999


Q ss_pred             ccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 003239          261 GSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL  321 (837)
Q Consensus       261 GlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~  321 (837)
                      |+++.....     .....+|..|+|||++.+..++.++|||||||++|||++ |+.||.+....+.
T Consensus       162 g~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  228 (327)
T 3poz_A          162 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI  228 (327)
T ss_dssp             THHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred             cceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH
Confidence            999654322     123355788999999999999999999999999999999 9999987655443


No 201
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=3.2e-39  Score=368.22  Aligned_cols=207  Identities=26%  Similarity=0.386  Sum_probs=180.1

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++.++||+|+||+||+|++. +++.||||+++......+.+.+|+.+|+.+       .||||+++++++. .+.+
T Consensus       187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~l~~~~~-~~~~  257 (454)
T 1qcf_A          187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTL-------QHDKLVKLHAVVT-KEPI  257 (454)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTC-------CCTTBCCEEEEEC-SSSC
T ss_pred             hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhC-------CCCCEeeEEEEEe-CCcc
Confidence            378999999999999999999875 467899999997666678899999999988       6899999999986 6679


Q ss_pred             EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      |||||||. ++|.+++.......+++..++.++.||+.||+|||+++||||||||+|||++   .++.+||+|||+++..
T Consensus       258 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DFG~a~~~  334 (454)
T 1qcf_A          258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARVI  334 (454)
T ss_dssp             EEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTCCEEECSTTGGGGB
T ss_pred             EEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEC---CCCcEEEeeCCCceEc
Confidence            99999997 5999999866545689999999999999999999999999999999999995   6789999999999765


Q ss_pred             CCcc----eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 003239          267 DRTV----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMI  326 (837)
Q Consensus       267 ~~~~----~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I~  326 (837)
                      ....    ....++..|+|||++....++.++|||||||++|||++ |+.||.+.+..+.+..+.
T Consensus       335 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~  399 (454)
T 1qcf_A          335 EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE  399 (454)
T ss_dssp             CCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH
T ss_pred             CCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            4322    22345678999999998899999999999999999999 999999887776665544


No 202
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=1.8e-39  Score=346.09  Aligned_cols=187  Identities=24%  Similarity=0.339  Sum_probs=158.7

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec---
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ---  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~---  184 (837)
                      .++|+++++||+|+||+||+|++  +++.||||+++...  .....+|.+++..+.     ..||||+++++++...   
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~-----l~h~niv~~~~~~~~~~~~   77 (301)
T 3q4u_A            7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD--EKSWFRETELYNTVM-----LRHENILGFIASDMTSRHS   77 (301)
T ss_dssp             GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHTC-----CCCTTBCCEEEEEEEEETT
T ss_pred             cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc--chhhHHHHHHHHHhh-----ccCcCeeeEEEeeccccCC
Confidence            38999999999999999999976  68999999997543  355667888877742     2699999999987653   


Q ss_pred             -ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhh--------cCCeeeccCCCCCeeeeccCCCCe
Q 003239          185 -RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK--------DAGIIHCDLKPENILLCTSVKPAE  254 (837)
Q Consensus       185 -~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLH--------s~gIVHrDLKPeNILl~~~~~~~~  254 (837)
                       ..+|+||||+. ++|.++++.   ..+++..++.++.||+.||+|||        +++|+||||||+|||++   .++.
T Consensus        78 ~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~---~~~~  151 (301)
T 3q4u_A           78 STQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK---KNGQ  151 (301)
T ss_dssp             EEEEEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEEC---TTSC
T ss_pred             CceeEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEc---CCCC
Confidence             56899999998 599998854   35999999999999999999999        99999999999999995   6789


Q ss_pred             EEEEecccccccCCc-------ceeeccCccccCchhhcCC------CCCccchHHHHHHHHHHHHhC
Q 003239          255 IKIIDFGSACTEDRT-------VYSYIQSRYYRSPEVLLGY------QYTTAIDMWSFGCIVAELFLG  309 (837)
Q Consensus       255 IKL~DFGlA~~~~~~-------~~~~~GT~~Y~APEvl~~~------~yt~ksDIWSLG~ILyELltG  309 (837)
                      +||+|||++......       ....+||+.|+|||++.+.      .++.++|||||||++|||++|
T Consensus       152 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg  219 (301)
T 3q4u_A          152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR  219 (301)
T ss_dssp             EEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence            999999999643222       1234789999999999876      456799999999999999999


No 203
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=4.6e-39  Score=340.06  Aligned_cols=206  Identities=25%  Similarity=0.423  Sum_probs=176.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++++.||+|+||+||+|++. +++.||||+++......+.+.+|+++++.+       .|+||+++++++. .+..
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~-~~~~   82 (279)
T 1qpc_A           12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQL-------QHQRLVRLYAVVT-QEPI   82 (279)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHC-------CCTTBCCEEEEEC-SSSC
T ss_pred             HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhC-------CCcCcceEEEEEc-CCCc
Confidence            379999999999999999999864 567899999987665677889999999999       5899999999986 4568


Q ss_pred             EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      ++||||+. ++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++...
T Consensus        83 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~~~  159 (279)
T 1qpc_A           83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLI  159 (279)
T ss_dssp             EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCEEC
T ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEc---CCCCEEECCCcccccc
Confidence            99999996 6999988765434699999999999999999999999999999999999995   6788999999999765


Q ss_pred             CCcce----eeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 003239          267 DRTVY----SYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM  325 (837)
Q Consensus       267 ~~~~~----~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I  325 (837)
                      .....    ...++..|+|||++.+..++.++|||||||++|||++ |+.||.+.+..+.+..+
T Consensus       160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  223 (279)
T 1qpc_A          160 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL  223 (279)
T ss_dssp             SSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH
T ss_pred             cCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHH
Confidence            43321    2345778999999998899999999999999999999 99999887766554443


No 204
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=1.6e-39  Score=356.97  Aligned_cols=196  Identities=14%  Similarity=0.166  Sum_probs=168.0

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCC--------CeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeE---
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEM--------NSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVR---  176 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~t--------g~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVk---  176 (837)
                      .++|++.+.||+|+||+||+|++..+        ++.||||+++..    +.+.+|+++++.++       |+||++   
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~-------h~niv~~~~  109 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAA-------KPLQVNKWK  109 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHC-------CHHHHHHHH
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhc-------ccchhhhhh
Confidence            47999999999999999999998874        889999999865    35678999999984       556655   


Q ss_pred             ------------EeEEEee-cceEEEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCC
Q 003239          177 ------------IYEYFVC-QRHLCICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPEN  243 (837)
Q Consensus       177 ------------l~d~f~~-~~~l~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeN  243 (837)
                                  +++++.. .+..||||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|
T Consensus       110 ~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~N  189 (352)
T 2jii_A          110 KLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAEN  189 (352)
T ss_dssp             HHTTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGG
T ss_pred             hhccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHH
Confidence                        7788876 678999999998899999987644679999999999999999999999999999999999


Q ss_pred             eeeeccCCCC--eEEEEecccccccCCc----------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCC
Q 003239          244 ILLCTSVKPA--EIKIIDFGSACTEDRT----------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLP  311 (837)
Q Consensus       244 ILl~~~~~~~--~IKL~DFGlA~~~~~~----------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~  311 (837)
                      ||++   .++  .+||+|||+++.....          .....+|+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus       190 Il~~---~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  266 (352)
T 2jii_A          190 IFVD---PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFL  266 (352)
T ss_dssp             EEEE---TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCC
T ss_pred             EEEc---CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCC
Confidence            9996   445  8999999999654322          123478999999999999999999999999999999999999


Q ss_pred             CCCCCC
Q 003239          312 LFPGAS  317 (837)
Q Consensus       312 PF~g~s  317 (837)
                      ||....
T Consensus       267 pf~~~~  272 (352)
T 2jii_A          267 PWTNCL  272 (352)
T ss_dssp             TTGGGT
T ss_pred             CcccCC
Confidence            997653


No 205
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=7.4e-39  Score=341.87  Aligned_cols=195  Identities=26%  Similarity=0.357  Sum_probs=168.8

Q ss_pred             CceEEEEEeccCCceeEEEee----ccCCCeEEEEEEEeCCh--hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          109 RRYIVKDLLGHGTFGQVAKCW----DAEMNSFVAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~----~~~tg~~VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      ++|+++++||+|+||.||+|+    +..+++.||||+++...  ...+.+.+|+++++.+       .|+||+++++++.
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~   93 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-------YHENIVKYKGICT   93 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTC-------CCTTBCCEEEEEE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhC-------CCCCeeeeeeEEe
Confidence            789999999999999999998    67889999999998532  3456788999999998       5899999999998


Q ss_pred             ec--ceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          183 CQ--RHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       183 ~~--~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      ..  ..+++||||+.+ +|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|
T Consensus        94 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~D  169 (302)
T 4e5w_A           94 EDGGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGD  169 (302)
T ss_dssp             C---CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECC
T ss_pred             cCCCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEc---CCCCEEECc
Confidence            87  678999999975 9999886553 4699999999999999999999999999999999999996   567999999


Q ss_pred             cccccccCCc------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 003239          260 FGSACTEDRT------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFP  314 (837)
Q Consensus       260 FGlA~~~~~~------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~  314 (837)
                      ||++......      .....+|..|+|||++.+..++.++|||||||++|+|++|..|+.
T Consensus       170 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~  230 (302)
T 4e5w_A          170 FGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS  230 (302)
T ss_dssp             CTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred             ccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence            9999755432      123457788999999999999999999999999999999999873


No 206
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=2.5e-39  Score=342.39  Aligned_cols=200  Identities=26%  Similarity=0.357  Sum_probs=165.5

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec-ce
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-RH  186 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~-~~  186 (837)
                      .++|++.+.||+|+||+||++++  +++.||||+++... ..+.+.+|+++++.+       .|+||+++++++... +.
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~~   89 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-TAQAFLAEASVMTQL-------RHSNLVQLLGVIVEEKGG   89 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC---HHHHHTHHHHTTC-------CCTTBCCEEEEECCC--C
T ss_pred             hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-HHHHHHHHHHHHHhC-------CCCCEeeEEEEEEcCCCc
Confidence            37999999999999999999976  48899999998654 456788899999888       689999999997654 57


Q ss_pred             EEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          187 LCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       187 l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                      .++||||+.+ +|.+++.......+++..++.++.||+.||+|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~~  166 (278)
T 1byg_A           90 LYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKE  166 (278)
T ss_dssp             CEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTSCEEECCCCC---
T ss_pred             eEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe---CCCcEEEeecccccc
Confidence            9999999985 999998876544589999999999999999999999999999999999995   678999999999986


Q ss_pred             cCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 003239          266 EDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD  320 (837)
Q Consensus       266 ~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e  320 (837)
                      .........++..|+|||++.+..++.++|||||||++|+|++ |..||......+
T Consensus       167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~  222 (278)
T 1byg_A          167 ASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD  222 (278)
T ss_dssp             ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG
T ss_pred             ccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            6655555677889999999999899999999999999999998 999997665433


No 207
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=4.5e-39  Score=336.76  Aligned_cols=204  Identities=16%  Similarity=0.183  Sum_probs=173.4

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|++.+.||+|+||+||+|++.  ++.||||+++..   ....+.+.+|+.+++.+       .||||+++++++...
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~   79 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF-------SHPNVLPVLGACQSP   79 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCC-------SCTTEECEEEEECTT
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhc-------CCCchhheEEEEccC
Confidence            379999999999999999999874  889999999854   34455677888887776       689999999999987


Q ss_pred             --ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCC--eeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          185 --RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG--IIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       185 --~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~g--IVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                        +..++||||+. ++|.+++.......+++..++.++.||+.||+|||+++  |+||||||+|||++   .++.++|+|
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~---~~~~~~l~~  156 (271)
T 3kmu_A           80 PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID---EDMTARISM  156 (271)
T ss_dssp             TSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEEC---TTSCEEEEG
T ss_pred             CCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEc---CCcceeEEe
Confidence              78999999998 59999998765446999999999999999999999999  99999999999995   667889998


Q ss_pred             cccccccCCcceeeccCccccCchhhcCCCCCc---cchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 003239          260 FGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTT---AIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM  325 (837)
Q Consensus       260 FGlA~~~~~~~~~~~GT~~Y~APEvl~~~~yt~---ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I  325 (837)
                      ||++.....  ....+|+.|+|||++.+..++.   ++|||||||++|||++|+.||.+.+..+....+
T Consensus       157 ~~~~~~~~~--~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~  223 (271)
T 3kmu_A          157 ADVKFSFQS--PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKV  223 (271)
T ss_dssp             GGSCCTTSC--TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHH
T ss_pred             ccceeeecc--cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHH
Confidence            888754322  2357899999999998875554   899999999999999999999887766654443


No 208
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=4.5e-39  Score=345.31  Aligned_cols=202  Identities=27%  Similarity=0.398  Sum_probs=172.8

Q ss_pred             CCceEEEEEeccCCceeEEEeec-----cCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWD-----AEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~-----~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      .++|++.+.||+|+||+||+|++     ..+++.||||+++..  ....+.+.+|+.+++.+.      .||||++++++
T Consensus        26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------~hp~iv~~~~~   99 (316)
T 2xir_A           26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG------HHLNVVNLLGA   99 (316)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC------CCTTBCCEEEE
T ss_pred             hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcc------cCCCeeeEEEE
Confidence            37999999999999999999973     467799999999864  334567889999999995      48999999999


Q ss_pred             Eeecc-eEEEEEeccc-hhHHHHHHhhcc--------------CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCe
Q 003239          181 FVCQR-HLCICFELLD-SNLYELIKINHF--------------RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENI  244 (837)
Q Consensus       181 f~~~~-~l~LVmEy~~-gsL~d~l~~~~~--------------~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNI  244 (837)
                      +...+ .+++||||+. ++|.+++.....              ..+++..++.++.||+.||.|||++||+||||||+||
T Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Ni  179 (316)
T 2xir_A          100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI  179 (316)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceE
Confidence            88765 5999999998 599998876532              1288999999999999999999999999999999999


Q ss_pred             eeeccCCCCeEEEEecccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCH
Q 003239          245 LLCTSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASE  318 (837)
Q Consensus       245 Ll~~~~~~~~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~  318 (837)
                      |++   .++.+||+|||++......     .....+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+...
T Consensus       180 l~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~  256 (316)
T 2xir_A          180 LLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI  256 (316)
T ss_dssp             EEC---GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC
T ss_pred             EEC---CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccch
Confidence            995   5678999999999754322     123466889999999999999999999999999999998 9999977653


No 209
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=3.4e-39  Score=350.02  Aligned_cols=205  Identities=24%  Similarity=0.318  Sum_probs=173.1

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEE--EEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFV--AVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~V--AIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ++|++.+.||+|+||.||+|++..+++.+  |||+++..  ....+.+.+|+++++++.      .||||+++++++...
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~------~hp~iv~~~~~~~~~   98 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG------HHPNIINLLGACEHR   98 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCC------CCTTBCCEEEEEEET
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhcc------CCCchhhhceeeeeC
Confidence            79999999999999999999999888865  99999753  334556788999988873      589999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhc--------------cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeecc
Q 003239          185 RHLCICFELLD-SNLYELIKINH--------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTS  249 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~--------------~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~  249 (837)
                      +.+||||||+. ++|.+++....              ...+++..++.++.||+.||.|||++||+||||||+|||++  
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~--  176 (327)
T 1fvr_A           99 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG--  176 (327)
T ss_dssp             TEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--
T ss_pred             CceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEc--
Confidence            99999999997 59999887643              24699999999999999999999999999999999999995  


Q ss_pred             CCCCeEEEEecccccccCCc--ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 003239          250 VKPAEIKIIDFGSACTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLL  322 (837)
Q Consensus       250 ~~~~~IKL~DFGlA~~~~~~--~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l  322 (837)
                       .++.+||+|||++......  .....+++.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+..
T Consensus       177 -~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~  251 (327)
T 1fvr_A          177 -ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY  251 (327)
T ss_dssp             -GGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             -CCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHH
Confidence             5678999999999744322  223456788999999998899999999999999999998 99999887665543


No 210
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=1.1e-38  Score=337.96  Aligned_cols=203  Identities=26%  Similarity=0.349  Sum_probs=170.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccC---CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAE---MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~---tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      .++|++.+.||+|+||+||+|++..   ++..||||+++..  ....+.+.+|+.+++.+       .||||+++++++.
T Consensus        11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~   83 (281)
T 3cc6_A           11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNL-------DHPHIVKLIGIIE   83 (281)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHH-------CCTTBCCEEEEEC
T ss_pred             ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhC-------CCCCcceEEEEEc
Confidence            3799999999999999999998543   4567999999864  34567788999999999       5899999999987


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      . +..++||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||
T Consensus        84 ~-~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg  158 (281)
T 3cc6_A           84 E-EPTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA---SPECVKLGDFG  158 (281)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---ETTEEEECCCC
T ss_pred             C-CCCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEC---CCCcEEeCccC
Confidence            5 45789999998 58888887653 4699999999999999999999999999999999999996   56799999999


Q ss_pred             cccccCCc----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 003239          262 SACTEDRT----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLL  322 (837)
Q Consensus       262 lA~~~~~~----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l  322 (837)
                      ++......    .....++..|+|||++.+..++.++|||||||++|+|++ |+.||......+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~  224 (281)
T 3cc6_A          159 LSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI  224 (281)
T ss_dssp             GGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHH
T ss_pred             CCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHH
Confidence            99754432    223456788999999998899999999999999999998 99999766554443


No 211
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=1.1e-39  Score=354.53  Aligned_cols=203  Identities=24%  Similarity=0.370  Sum_probs=168.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeE----EEEEEEeCCh--hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSF----VAVKIIKNQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~----VAIKiik~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      .++|+++++||+|+||+||+|++..+++.    ||+|++....  ...+.+.+|+.+++.+       .|+||+++++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~   84 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL-------DHAHIVRLLGLC   84 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTC-------CCTTBCCEEEEE
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcC-------CCCCcCeEEEEE
Confidence            47999999999999999999998888765    7777775332  2234566788888887       689999999988


Q ss_pred             eecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEec
Q 003239          182 VCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF  260 (837)
Q Consensus       182 ~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DF  260 (837)
                      . .+..++||||+. ++|.+++.... ..+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+||
T Consensus        85 ~-~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~~~kl~Df  159 (325)
T 3kex_A           85 P-GSSLQLVTQYLPLGSLLDHVRQHR-GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK---SPSQVQVADF  159 (325)
T ss_dssp             C-BSSEEEEEECCTTCBSHHHHHSSG-GGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEES---SSSCEEECSC
T ss_pred             c-CCccEEEEEeCCCCCHHHHHHHcc-ccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEEC---CCCeEEECCC
Confidence            6 567899999998 68998887643 4699999999999999999999999999999999999995   6788999999


Q ss_pred             ccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 003239          261 GSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLL  322 (837)
Q Consensus       261 GlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l  322 (837)
                      |+++.....     .....++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+..
T Consensus       160 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~  227 (325)
T 3kex_A          160 GVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP  227 (325)
T ss_dssp             SGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHH
T ss_pred             CcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHH
Confidence            999754322     234467789999999999999999999999999999999 99999876554443


No 212
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=5e-39  Score=370.53  Aligned_cols=203  Identities=23%  Similarity=0.335  Sum_probs=176.6

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|+++++||+|+||.||+|++..+++.||||+++.... ...+.+|+++++.|.+      +++|+.+..++...+..
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-~~~~~~E~~il~~L~~------~~~i~~i~~~~~~~~~~   78 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-HPQLLYESKIYRILQG------GTGIPNVRWFGVEGDYN   78 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-SCCHHHHHHHHHHTTT------STTCCCEEEEEEETTEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-cHHHHHHHHHHHHhcC------CCCCCeEEEEEeeCCEE
Confidence            3799999999999999999999999999999999875432 2457789999999963      46777777888888999


Q ss_pred             EEEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccccccC
Q 003239          188 CICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTED  267 (837)
Q Consensus       188 ~LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~~  267 (837)
                      ||||||++++|.+++.... ..+++..++.|+.||+.||+|||+++||||||||+||||+.++..+.+||+|||+++...
T Consensus        79 ~lvme~~g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           79 VLVMDLLGPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEEECCCCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            9999999889999987543 469999999999999999999999999999999999999655577899999999996543


Q ss_pred             Cc----------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH
Q 003239          268 RT----------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE  318 (837)
Q Consensus       268 ~~----------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~  318 (837)
                      ..          ....+||..|+|||++.+..++.++||||||||||||++|+.||.+...
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~  218 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA  218 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence            22          1256789999999999999999999999999999999999999987543


No 213
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.1e-38  Score=344.19  Aligned_cols=199  Identities=24%  Similarity=0.399  Sum_probs=166.4

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      .++|++.++||+|+||+||+|++..+++.||||+++..    ....+.+.+|+.+++.+       .||||+++++++..
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~hp~iv~~~~~~~~  105 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL-------QEPHVVPIHDFGEI  105 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc-------CCCCeeEEEEEEee
Confidence            37999999999999999999999999999999999753    23346778899998887       68999999999999


Q ss_pred             cceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      ++.+|+||||+.+ +|.+++...  ..+++..++.++.||+.||.|||+++|+||||||+|||++   .++.+||+|||+
T Consensus       106 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~---~~~~~kl~Dfg~  180 (309)
T 2h34_A          106 DGQLYVDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS---ADDFAYLVDFGI  180 (309)
T ss_dssp             TTEEEEEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSCCC
T ss_pred             CCeEEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEc---CCCCEEEecCcc
Confidence            9999999999985 899988765  3699999999999999999999999999999999999995   567899999999


Q ss_pred             ccccCCc----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH
Q 003239          263 ACTEDRT----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE  318 (837)
Q Consensus       263 A~~~~~~----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~  318 (837)
                      +......    .....+++.|+|||++.+..++.++|||||||++|+|++|+.||.+.+.
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  240 (309)
T 2h34_A          181 ASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL  240 (309)
T ss_dssp             ----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH
T ss_pred             CccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH
Confidence            8654332    2345789999999999999999999999999999999999999987644


No 214
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.6e-38  Score=338.16  Aligned_cols=204  Identities=23%  Similarity=0.314  Sum_probs=172.2

Q ss_pred             CceEEEE-EeccCCceeEEEeec--cCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          109 RRYIVKD-LLGHGTFGQVAKCWD--AEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       109 ~~Y~i~~-~LG~G~fG~Vyka~~--~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      ++|.+.+ .||+|+||+||+|.+  ..+++.||||+++..  ....+.+.+|+++++.+       .||||+++++++ .
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~-~   80 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-------DNPYIVRLIGVC-Q   80 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEE-E
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhC-------CCCCEeEEEEEe-c
Confidence            6788887 999999999999975  356889999999863  45567788999999998       589999999999 5


Q ss_pred             cceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      .+..++||||+.+ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~Dfg~  156 (287)
T 1u59_A           81 AEALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGL  156 (287)
T ss_dssp             SSSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---ETTEEEECCCTT
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEc---CCCCEEECcccc
Confidence            5679999999985 888887643 34699999999999999999999999999999999999996   567999999999


Q ss_pred             ccccCCcc------eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 003239          263 ACTEDRTV------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR  324 (837)
Q Consensus       263 A~~~~~~~------~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~  324 (837)
                      +.......      ....+|+.|+|||++.+..++.++|||||||++|||++ |+.||......+....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~  225 (287)
T 1u59_A          157 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF  225 (287)
T ss_dssp             CEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH
T ss_pred             eeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence            97553221      12345788999999998899999999999999999998 9999987766554443


No 215
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=8.5e-39  Score=346.99  Aligned_cols=205  Identities=24%  Similarity=0.351  Sum_probs=175.2

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCe-----EEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNS-----FVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~-----~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      .++|++.+.||+|+||+||+|.+..+++     .||||+++..  ....+.+.+|+.+++.+.      .||||++++++
T Consensus        45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------~h~~iv~~~~~  118 (333)
T 2i1m_A           45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG------QHENIVNLLGA  118 (333)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHC------CCTTBCCEEEE
T ss_pred             HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhc------CCCCeeeEEEE
Confidence            4789999999999999999999876654     7999999864  344567889999999994      48999999999


Q ss_pred             EeecceEEEEEeccc-hhHHHHHHhhc------------cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeee
Q 003239          181 FVCQRHLCICFELLD-SNLYELIKINH------------FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLC  247 (837)
Q Consensus       181 f~~~~~l~LVmEy~~-gsL~d~l~~~~------------~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~  247 (837)
                      +...+.+++||||+. ++|.+++....            ...+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus       119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT  198 (333)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred             EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence            999999999999997 49999887643            23589999999999999999999999999999999999996


Q ss_pred             ccCCCCeEEEEecccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 003239          248 TSVKPAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL  321 (837)
Q Consensus       248 ~~~~~~~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~  321 (837)
                         .++.+||+|||++......     .....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+......
T Consensus       199 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  275 (333)
T 2i1m_A          199 ---NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK  275 (333)
T ss_dssp             ---GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHH
T ss_pred             ---CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHH
Confidence               5678999999999754221     123356788999999999899999999999999999998 9999987654333


No 216
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=1.3e-39  Score=353.36  Aligned_cols=191  Identities=23%  Similarity=0.292  Sum_probs=155.0

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee----
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC----  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~----  183 (837)
                      .++|+++++||+|+||+||+|++  +++.||||+++....  .....|.+++..     ....|+||+++++.+..    
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~e~~~~~~-----~~~~h~~i~~~~~~~~~~~~~   82 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR--QNFINEKNIYRV-----PLMEHDNIARFIVGDERVTAD   82 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH--HHHHHHHHHHTS-----TTCCCTTBCCEEEEEEEECTT
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch--hhHHHHHHHHHH-----HhccCcchhhheecccccccC
Confidence            48999999999999999999965  689999999985433  334444444332     12379999999986543    


Q ss_pred             -cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcC---------CeeeccCCCCCeeeeccCCC
Q 003239          184 -QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA---------GIIHCDLKPENILLCTSVKP  252 (837)
Q Consensus       184 -~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~---------gIVHrDLKPeNILl~~~~~~  252 (837)
                       ...+|||||||. ++|.+++....   +++..++.++.||+.||+|||++         +||||||||+|||++   .+
T Consensus        83 ~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~---~~  156 (336)
T 3g2f_A           83 GRMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK---ND  156 (336)
T ss_dssp             SCEEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC---TT
T ss_pred             CCceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc---CC
Confidence             246899999996 59999987654   68999999999999999999999         999999999999995   66


Q ss_pred             CeEEEEecccccccCC-----------cceeeccCccccCchhhcC-------CCCCccchHHHHHHHHHHHHhCCCCC
Q 003239          253 AEIKIIDFGSACTEDR-----------TVYSYIQSRYYRSPEVLLG-------YQYTTAIDMWSFGCIVAELFLGLPLF  313 (837)
Q Consensus       253 ~~IKL~DFGlA~~~~~-----------~~~~~~GT~~Y~APEvl~~-------~~yt~ksDIWSLG~ILyELltG~~PF  313 (837)
                      +.+||+|||++.....           .....+||+.|+|||++.+       ..++.++|||||||++|||++|..||
T Consensus       157 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~  235 (336)
T 3g2f_A          157 GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL  235 (336)
T ss_dssp             SCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGG
T ss_pred             CcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcC
Confidence            8999999999965432           1224478999999999987       45678999999999999999996554


No 217
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.1e-38  Score=346.12  Aligned_cols=208  Identities=22%  Similarity=0.314  Sum_probs=171.7

Q ss_pred             cCCceEEEEEeccCCceeEEEeeccCCC----eEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          107 TQRRYIVKDLLGHGTFGQVAKCWDAEMN----SFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       107 ~~~~Y~i~~~LG~G~fG~Vyka~~~~tg----~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      ...+|++.++||+|+||+||+|++..++    ..||||+++..  ......+.+|+.+++.+       .|+||++++++
T Consensus        42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~  114 (333)
T 1mqb_A           42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF-------SHHNIIRLEGV  114 (333)
T ss_dssp             CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTC-------CCTTBCCEEEE
T ss_pred             ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhC-------CCCCCCcEEEE
Confidence            3489999999999999999999876543    46999999853  34455688899999988       68999999999


Q ss_pred             EeecceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          181 FVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       181 f~~~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      +...+..+|||||+.+ +|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|
T Consensus       115 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~D  190 (333)
T 1mqb_A          115 ISKYKPMMIITEYMENGALDKFLREKD-GEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN---SNLVCKVSD  190 (333)
T ss_dssp             ECSSSSEEEEEECCTTEEHHHHHHHTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECC
T ss_pred             EecCCCcEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEEC---CCCcEEECC
Confidence            9999999999999985 8888887643 4699999999999999999999999999999999999995   678999999


Q ss_pred             cccccccCCcc------eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 003239          260 FGSACTEDRTV------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM  325 (837)
Q Consensus       260 FGlA~~~~~~~------~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I  325 (837)
                      ||++.......      ....++..|+|||++.+..++.++|||||||++|||++ |..||...+..+.+..+
T Consensus       191 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~  263 (333)
T 1mqb_A          191 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI  263 (333)
T ss_dssp             CCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred             CCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHH
Confidence            99997543321      12245778999999999999999999999999999998 99999887765554443


No 218
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=2.5e-38  Score=337.36  Aligned_cols=203  Identities=27%  Similarity=0.405  Sum_probs=172.0

Q ss_pred             CceEEEE-EeccCCceeEEEe--eccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          109 RRYIVKD-LLGHGTFGQVAKC--WDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       109 ~~Y~i~~-~LG~G~fG~Vyka--~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      ++|++.+ .||+|+||+||+|  .+..+++.||||+++..   ....+.+.+|+++++.+       .||||+++++++ 
T Consensus        16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~~-   87 (291)
T 1xbb_A           16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-------DNPYIVRMIGIC-   87 (291)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTC-------CCTTBCCEEEEE-
T ss_pred             hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhC-------CCCCEEEEEEEE-
Confidence            7899998 9999999999999  45677899999999854   23356788999999988       689999999999 


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      ..+..++||||+. ++|.+++...  ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||
T Consensus        88 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg  162 (291)
T 1xbb_A           88 EAESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFG  162 (291)
T ss_dssp             ESSSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCT
T ss_pred             CCCCcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEe---CCCcEEEccCC
Confidence            5678899999998 5898888764  3599999999999999999999999999999999999996   56799999999


Q ss_pred             cccccCCcc------eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Q 003239          262 SACTEDRTV------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRR  324 (837)
Q Consensus       262 lA~~~~~~~------~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~  324 (837)
                      ++.......      ....++..|+|||++.+..++.++|||||||++|+|++ |+.||.+.+..+....
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~  232 (291)
T 1xbb_A          163 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM  232 (291)
T ss_dssp             TCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred             cceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            997543321      12245688999999998899999999999999999999 9999988776554433


No 219
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=9e-39  Score=346.75  Aligned_cols=198  Identities=28%  Similarity=0.400  Sum_probs=172.3

Q ss_pred             CCceEEEEEeccCCceeEEEee----ccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCW----DAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~----~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      .++|+++++||+|+||.||+|+    +..+++.||||+++.. ....+.+.+|+++++.+       .|+||+++++++.
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~   94 (327)
T 3lxl_A           22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL-------HSDFIVKYRGVSY   94 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTC-------CCTTBCCEEEEEE
T ss_pred             hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhc-------CCCceeEEEEEEe
Confidence            4899999999999999999998    6788999999999865 34456688999999998       6899999999987


Q ss_pred             --ecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          183 --CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       183 --~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                        ....+||||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~---~~~~~kl~D  170 (327)
T 3lxl_A           95 GPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE---SEAHVKIAD  170 (327)
T ss_dssp             CSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECC
T ss_pred             cCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEEC---CCCCEEEcc
Confidence              4567999999996 68999887654 3599999999999999999999999999999999999996   678899999


Q ss_pred             cccccccCCcc------eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          260 FGSACTEDRTV------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       260 FGlA~~~~~~~------~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                      ||++.......      ....+|..|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       171 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~  233 (327)
T 3lxl_A          171 FGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSP  233 (327)
T ss_dssp             GGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSH
T ss_pred             cccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccc
Confidence            99997543221      2335778899999999989999999999999999999999999653


No 220
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=8.7e-39  Score=364.60  Aligned_cols=206  Identities=24%  Similarity=0.351  Sum_probs=175.0

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++.++||+|+||+||+|.+.. +..||||+++......+.+.+|+++|+++       .||||+++++++.. +.+
T Consensus       183 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~-~~~  253 (452)
T 1fmk_A          183 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKL-------RHEKLVQLYAVVSE-EPI  253 (452)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHC-------CCTTBCCEEEEECS-SSC
T ss_pred             hhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhC-------CCCCEeeEEEEEcC-Cce
Confidence            3789999999999999999998765 46699999987655567889999999999       68999999999876 779


Q ss_pred             EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      ||||||+. ++|.+++.......+++..+..++.||+.||+|||+++||||||||+|||++   .++.+||+|||+++..
T Consensus       254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~~~  330 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLI  330 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCCTTC--
T ss_pred             EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEC---CCCCEEECCCccceec
Confidence            99999997 5999998765545699999999999999999999999999999999999995   5678999999999754


Q ss_pred             CCcc----eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 003239          267 DRTV----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM  325 (837)
Q Consensus       267 ~~~~----~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I  325 (837)
                      ....    ....++..|+|||++....++.++|||||||++|||++ |+.||.+....+.+..+
T Consensus       331 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i  394 (452)
T 1fmk_A          331 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV  394 (452)
T ss_dssp             ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH
T ss_pred             CCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            3221    22345778999999998899999999999999999999 99999988776655544


No 221
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=7.4e-39  Score=344.67  Aligned_cols=197  Identities=23%  Similarity=0.353  Sum_probs=167.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC-ChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee---
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN-QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC---  183 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~-~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~---  183 (837)
                      .++|++.+.||+|+||.||+|++..+++.||||++.. .....+.+.+|+.+++.+       .|+||+++++++..   
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~  100 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLF-------NHPNILRLVAYCLRERG  100 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTC-------CCTTBCCCCEEEEEEET
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhc-------CCCCeeeEEEEEEeccC
Confidence            3799999999999999999999999999999999864 345567788999999988       68999999999973   


Q ss_pred             -cceEEEEEeccch-hHHHHHHhh--ccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          184 -QRHLCICFELLDS-NLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       184 -~~~l~LVmEy~~g-sL~d~l~~~--~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                       ....++||||+.+ +|.+++...  ....+++..++.++.||+.||+|||+++|+||||||+|||++   .++.+||+|
T Consensus       101 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~d  177 (317)
T 2buj_A          101 AKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG---DEGQPVLMD  177 (317)
T ss_dssp             TEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECC
T ss_pred             CCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc---CCCCEEEEe
Confidence             4589999999985 998888763  234699999999999999999999999999999999999995   678899999


Q ss_pred             cccccccCCcc------------eeeccCccccCchhhcCCC---CCccchHHHHHHHHHHHHhCCCCCC
Q 003239          260 FGSACTEDRTV------------YSYIQSRYYRSPEVLLGYQ---YTTAIDMWSFGCIVAELFLGLPLFP  314 (837)
Q Consensus       260 FGlA~~~~~~~------------~~~~GT~~Y~APEvl~~~~---yt~ksDIWSLG~ILyELltG~~PF~  314 (837)
                      ||++.......            ....+|+.|+|||++.+..   ++.++|||||||++|+|++|+.||.
T Consensus       178 fg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  247 (317)
T 2buj_A          178 LGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD  247 (317)
T ss_dssp             CSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred             cCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence            99986543211            1235699999999997653   7899999999999999999999993


No 222
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=2.8e-38  Score=340.96  Aligned_cols=195  Identities=27%  Similarity=0.437  Sum_probs=161.0

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++.+.||+|+||+||++++.  ++.||||+++... ..+.+.+|+++|+++       .||||+++++++.  +..
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~--~~~   74 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESES-ERKAFIVELRQLSRV-------NHPNIVKLYGACL--NPV   74 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSSTT-HHHHHHHHHHHHHHC-------CCTTBCCEEEBCT--TTT
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecChh-HHHHHHHHHHHHhcC-------CCCCcCeEEEEEc--CCc
Confidence            378999999999999999999764  7889999997543 456788999999998       6899999999887  458


Q ss_pred             EEEEeccc-hhHHHHHHhhcc-CCCCHHHHHHHHHhHHHHHhhhhc---CCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          188 CICFELLD-SNLYELIKINHF-RGLSLSIVQLFSKQILRGLSLLKD---AGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~-~~L~e~~i~~I~~QIl~aL~yLHs---~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      |+||||+. ++|.+++..... ..+++..+..++.||++||+|||+   +||+||||||+|||++  .+...+||+|||+
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~--~~~~~~kl~Dfg~  152 (307)
T 2eva_A           75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV--AGGTVLKICDFGT  152 (307)
T ss_dssp             EEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEE--TTTTEEEECCCCC
T ss_pred             EEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEe--CCCCEEEEccccc
Confidence            99999997 599998875432 247899999999999999999999   8999999999999996  2333589999999


Q ss_pred             ccccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          263 ACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       263 A~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                      +...........||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus       153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  206 (307)
T 2eva_A          153 ACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI  206 (307)
T ss_dssp             ------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred             ccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence            987665555668999999999999999999999999999999999999999654


No 223
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=9.5e-39  Score=348.28  Aligned_cols=202  Identities=24%  Similarity=0.392  Sum_probs=166.3

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEE----EEEEEeC--ChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFV----AVKIIKN--QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~V----AIKiik~--~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      .++|+++++||+|+||+||+|++..+++.|    |+|.++.  .....+.+.+|+.+++.+       .||||+++++++
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~   86 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-------DNPHVCRLLGIC   86 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTC-------CBTTBCCCCEEE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhC-------CCCCeeEEEEEE
Confidence            489999999999999999999988887655    6666653  234567788999999888       689999999999


Q ss_pred             eecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEec
Q 003239          182 VCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDF  260 (837)
Q Consensus       182 ~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DF  260 (837)
                      .... .++|||++. ++|.+++.... ..+++..++.++.||+.||.|||++|||||||||+|||++   .++.+||+||
T Consensus        87 ~~~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kL~Df  161 (327)
T 3lzb_A           87 LTST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---TPQHVKITDF  161 (327)
T ss_dssp             ESSS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---ETTEEEECCT
T ss_pred             ecCC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEc---CCCCEEEccC
Confidence            8765 778888887 68998887654 4699999999999999999999999999999999999996   5678999999


Q ss_pred             ccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHH
Q 003239          261 GSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDL  321 (837)
Q Consensus       261 GlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~  321 (837)
                      |+++.....     .....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+....+.
T Consensus       162 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~  228 (327)
T 3lzb_A          162 GLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI  228 (327)
T ss_dssp             TC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred             cceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Confidence            999754322     223355778999999999999999999999999999999 9999987665443


No 224
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=5.7e-39  Score=357.26  Aligned_cols=207  Identities=23%  Similarity=0.343  Sum_probs=167.6

Q ss_pred             CCceEEEEEeccCCceeEEEeecc---CCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDA---EMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~---~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      ..+|++.+.||+|+||+||+|++.   .++..||||+++..  ....+.+.+|+.+|+++       .|+||+++++++.
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~niv~~~~~~~  116 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF-------DHPNIIRLEGVVT  116 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEEC
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhC-------CCCCCCeEEEEEe
Confidence            378999999999999999999876   56778999999853  34556788999999888       6899999999999


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      ..+..+|||||+. ++|.+++.... ..+++.+++.++.||+.||+|||+++|+||||||+|||++   .++.+||+|||
T Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg  192 (373)
T 2qol_A          117 KSKPVMIVTEYMENGSLDSFLRKHD-AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN---SNLVCKVSDFG  192 (373)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTT-TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCC-
T ss_pred             eCCceEEEEeCCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEc---CCCCEEECcCc
Confidence            9999999999996 68998887543 4699999999999999999999999999999999999995   67899999999


Q ss_pred             cccccCCcc------eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 003239          262 SACTEDRTV------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM  325 (837)
Q Consensus       262 lA~~~~~~~------~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I  325 (837)
                      +++......      ....++..|+|||++.+..++.++|||||||++|||++ |+.||...+..+....+
T Consensus       193 ~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i  263 (373)
T 2qol_A          193 LGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV  263 (373)
T ss_dssp             ---------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHH
T ss_pred             cccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            997543321      11234678999999999999999999999999999998 99999887766554443


No 225
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=2.7e-38  Score=337.10  Aligned_cols=204  Identities=27%  Similarity=0.395  Sum_probs=162.6

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++|++.++||+|+||+||+|++..   .||||+++..   ....+.+.+|+.+++.+       .|+||++++++. ..
T Consensus        23 ~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~-~~   91 (289)
T 3og7_A           23 DGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKT-------RHVNILLFMGYS-TA   91 (289)
T ss_dssp             TTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTC-------CCTTBCCEEEEE-CS
T ss_pred             ccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhC-------CCCcEEEEEeec-cC
Confidence            3799999999999999999997653   4999999743   34456788899999888       689999999954 56


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      ...++||||+. ++|.+++.... ..+++..++.++.||+.||.|||+++|+||||||+|||++   .++.+||+|||++
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~  167 (289)
T 3og7_A           92 PQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLA  167 (289)
T ss_dssp             SSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTTEEEECCCC--
T ss_pred             CccEEEEEecCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC---CCCCEEEccceec
Confidence            67899999997 58888775443 5699999999999999999999999999999999999996   6689999999999


Q ss_pred             cccCC-----cceeeccCccccCchhhc---CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Q 003239          264 CTEDR-----TVYSYIQSRYYRSPEVLL---GYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRMI  326 (837)
Q Consensus       264 ~~~~~-----~~~~~~GT~~Y~APEvl~---~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I~  326 (837)
                      .....     ......+|+.|+|||++.   +..++.++|||||||++|+|++|+.||......+.+..++
T Consensus       168 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~  238 (289)
T 3og7_A          168 TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV  238 (289)
T ss_dssp             ----------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHH
T ss_pred             cccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHh
Confidence            64332     223457899999999997   5578899999999999999999999998866655544443


No 226
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=3.3e-38  Score=338.93  Aligned_cols=198  Identities=24%  Similarity=0.393  Sum_probs=163.8

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeC----ChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN----QPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~----~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ++|++.+.||+|+||.||+|++..+++.||||+++.    .....+.+.+|+.+++.+       .|+||+++++++...
T Consensus        32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~  104 (310)
T 2wqm_A           32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-------NHPNVIKYYASFIED  104 (310)
T ss_dssp             GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTC-------CCTTBCCEEEEEEET
T ss_pred             cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhC-------CCCCEeeEEEEEEcC
Confidence            789999999999999999999999999999999974    234566788899999988       689999999999999


Q ss_pred             ceEEEEEeccch-hHHHHHHhh--ccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          185 RHLCICFELLDS-NLYELIKIN--HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       185 ~~l~LVmEy~~g-sL~d~l~~~--~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      +..++||||+.+ +|.+++...  ....+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~---~~~~~kl~Dfg  181 (310)
T 2wqm_A          105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLG  181 (310)
T ss_dssp             TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCC-
T ss_pred             CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEc---CCCCEEEEecc
Confidence            999999999985 888888653  234599999999999999999999999999999999999995   67899999999


Q ss_pred             cccccCCc---ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCC
Q 003239          262 SACTEDRT---VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGA  316 (837)
Q Consensus       262 lA~~~~~~---~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~  316 (837)
                      ++......   .....+++.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~  239 (310)
T 2wqm_A          182 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD  239 (310)
T ss_dssp             -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             ceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            98654332   23457899999999999999999999999999999999999999654


No 227
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=8.9e-39  Score=352.75  Aligned_cols=202  Identities=21%  Similarity=0.311  Sum_probs=172.2

Q ss_pred             CCceEEEEEeccCCceeEEEe-----eccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKC-----WDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka-----~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      .++|++.++||+|+||+||+|     .+..+++.||||+++...  ...+.+|+++++.+++.    .|+||+++++++.
T Consensus        64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~e~~~~~~l~~~----~~~~iv~~~~~~~  137 (365)
T 3e7e_A           64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN--PWEFYIGTQLMERLKPS----MQHMFMKFYSAHL  137 (365)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC--HHHHHHHHHHHHHSCGG----GGGGBCCEEEEEE
T ss_pred             CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC--hhHHHHHHHHHHHhhhh----hhhhhhhhheeee
Confidence            378999999999999999999     467789999999998653  45678899999988643    6899999999999


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhc---cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeec--------cC
Q 003239          183 CQRHLCICFELLD-SNLYELIKINH---FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCT--------SV  250 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~---~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~--------~~  250 (837)
                      ..+..|||||||. ++|.+++....   ...+++..++.|+.||+.||+|||++|||||||||+||||+.        +.
T Consensus       138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~  217 (365)
T 3e7e_A          138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDD  217 (365)
T ss_dssp             CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-----
T ss_pred             cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccc
Confidence            9999999999997 69999987532   346999999999999999999999999999999999999963        12


Q ss_pred             CCCeEEEEeccccccc-----CCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 003239          251 KPAEIKIIDFGSACTE-----DRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG  315 (837)
Q Consensus       251 ~~~~IKL~DFGlA~~~-----~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g  315 (837)
                      ..+.+||+|||+|+..     .......+||+.|+|||++.+..|+.++||||||||+|||++|+.||..
T Consensus       218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~  287 (365)
T 3e7e_A          218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVK  287 (365)
T ss_dssp             -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEE
T ss_pred             ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCcccc
Confidence            2689999999999643     2233456799999999999999999999999999999999999999943


No 228
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=2.3e-38  Score=340.61  Aligned_cols=206  Identities=20%  Similarity=0.318  Sum_probs=165.4

Q ss_pred             CCceEEEEEeccCCceeEEEeeccC---CCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAE---MNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYF  181 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~---tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f  181 (837)
                      .++|++.+.||+|+||.||+|++..   +++.||||+++..   ....+.+.+|+.+++.+       .||||+++++++
T Consensus        33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~  105 (313)
T 3brb_A           33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDF-------SHPNVIRLLGVC  105 (313)
T ss_dssp             GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTC-------CCTTBCCCCEEE
T ss_pred             HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcC-------CCCCeeeeeEEE
Confidence            3799999999999999999997654   5668999999743   34456788899999988       689999999999


Q ss_pred             eecc-----eEEEEEeccc-hhHHHHHHhh----ccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCC
Q 003239          182 VCQR-----HLCICFELLD-SNLYELIKIN----HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVK  251 (837)
Q Consensus       182 ~~~~-----~l~LVmEy~~-gsL~d~l~~~----~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~  251 (837)
                      ...+     ..++||||+. ++|.+++...    ....+++..++.++.||+.||.|||++||+||||||+|||++   .
T Consensus       106 ~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---~  182 (313)
T 3brb_A          106 IEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLR---D  182 (313)
T ss_dssp             EC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEEC---T
T ss_pred             eeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---C
Confidence            8765     4599999998 5898888543    234599999999999999999999999999999999999995   6


Q ss_pred             CCeEEEEecccccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHH
Q 003239          252 PAEIKIIDFGSACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLR  323 (837)
Q Consensus       252 ~~~IKL~DFGlA~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~  323 (837)
                      ++.+||+|||++......     .....+++.|+|||++.+..++.++|||||||++|+|++ |.+||.+....+...
T Consensus       183 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~  260 (313)
T 3brb_A          183 DMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD  260 (313)
T ss_dssp             TSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH
T ss_pred             CCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHH
Confidence            678999999999754322     223456788999999999999999999999999999999 899998766544433


No 229
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=2.2e-38  Score=338.00  Aligned_cols=203  Identities=22%  Similarity=0.327  Sum_probs=168.9

Q ss_pred             CceEEEEEeccCCceeEEEeeccCC---CeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe-
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEM---NSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV-  182 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~t---g~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~-  182 (837)
                      .+|++.++||+|+||+||+|++..+   ...||+|+++..  ....+.+.+|+.+++++       .|+||+++++++. 
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~   97 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-------SHPNVLSLLGICLR   97 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-------CCTTBCCCCEEECC
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhC-------CCCCEeeeeeEEEc
Confidence            6899999999999999999986543   346999999753  34557788999999988       5899999999854 


Q ss_pred             ecceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 CQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 ~~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      .++..++||||+.+ +|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||
T Consensus        98 ~~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg  173 (298)
T 3f66_A           98 SEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFG  173 (298)
T ss_dssp             SSSCCEEEEECCTTCBHHHHHHCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECSCG
T ss_pred             CCCceEEEEeCCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEC---CCCCEEECccc
Confidence            55688999999985 9998887543 5689999999999999999999999999999999999995   67899999999


Q ss_pred             cccccCCc-------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHH
Q 003239          262 SACTEDRT-------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLL  322 (837)
Q Consensus       262 lA~~~~~~-------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l  322 (837)
                      ++......       .....+|+.|+|||++.+..++.++|||||||++|+|++ +.+||...+..+..
T Consensus       174 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~  242 (298)
T 3f66_A          174 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT  242 (298)
T ss_dssp             GGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHH
T ss_pred             ccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHH
Confidence            99754322       223456788999999999999999999999999999999 67788766544433


No 230
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.8e-38  Score=336.27  Aligned_cols=201  Identities=22%  Similarity=0.330  Sum_probs=168.5

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCC---eEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMN---SFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg---~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      ..|++.++||+|+||+||+|++..++   ..||+|+++..  ....+.+.+|+.+++.+       .|+||+++++++..
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~   93 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL-------NHPNVLALIGIMLP   93 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTC-------CCTTBCCCCEEECC
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhC-------CCCCeeeEEEEEec
Confidence            56888899999999999999865444   48999999753  34557788999999988       68999999999987


Q ss_pred             cceE-EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          184 QRHL-CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       184 ~~~l-~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      .+.. ++||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||
T Consensus        94 ~~~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~---~~~~~kl~Dfg  169 (298)
T 3pls_A           94 PEGLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD---ESFTVKVADFG  169 (298)
T ss_dssp             SSSCCEEEECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECCTT
T ss_pred             CCCCcEEEEecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCcEEeCcCC
Confidence            7655 99999996 68998887643 5689999999999999999999999999999999999995   67799999999


Q ss_pred             cccccCCc-------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 003239          262 SACTEDRT-------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD  320 (837)
Q Consensus       262 lA~~~~~~-------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e  320 (837)
                      ++......       .....++..|+|||++.+..++.++|||||||++|+|++ +.+||...+..+
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~  236 (298)
T 3pls_A          170 LARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFD  236 (298)
T ss_dssp             SSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGG
T ss_pred             CcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHH
Confidence            99644321       223466889999999999999999999999999999999 566665554433


No 231
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3e-38  Score=341.99  Aligned_cols=191  Identities=24%  Similarity=0.259  Sum_probs=159.6

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec---
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ---  184 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~---  184 (837)
                      .++|+++++||+|+||.||+|++.  ++.||||++.....  ....+|.+++..+.     ..|+||+++++++...   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~--~~~~~e~~~~~~~~-----~~h~~i~~~~~~~~~~~~~  106 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTEE--ASWFRETEIYQTVL-----MRHENILGFIAADIKGTGS  106 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGGH--HHHHHHHHHHTSTT-----CCCTTBCCEEEEEEESCGG
T ss_pred             ccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecccc--chhhhHHHHHHHHh-----hcCCCeeeEEEEEccCCCC
Confidence            379999999999999999999764  89999999975543  34455666655442     2699999999999987   


Q ss_pred             -ceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcC--------CeeeccCCCCCeeeeccCCCCe
Q 003239          185 -RHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA--------GIIHCDLKPENILLCTSVKPAE  254 (837)
Q Consensus       185 -~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~--------gIVHrDLKPeNILl~~~~~~~~  254 (837)
                       ..+|+||||+.+ +|.++++..   .+++..++.++.||+.||+|||++        +||||||||+|||++   .++.
T Consensus       107 ~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~---~~~~  180 (337)
T 3mdy_A          107 WTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK---KNGT  180 (337)
T ss_dssp             GCEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC---TTSC
T ss_pred             CCceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC---CCCC
Confidence             789999999975 999998654   499999999999999999999998        999999999999995   6779


Q ss_pred             EEEEecccccccCCcc-------eeeccCccccCchhhcCCCCCcc------chHHHHHHHHHHHHhCCCCC
Q 003239          255 IKIIDFGSACTEDRTV-------YSYIQSRYYRSPEVLLGYQYTTA------IDMWSFGCIVAELFLGLPLF  313 (837)
Q Consensus       255 IKL~DFGlA~~~~~~~-------~~~~GT~~Y~APEvl~~~~yt~k------sDIWSLG~ILyELltG~~PF  313 (837)
                      +||+|||++.......       ...+||+.|+|||++.+..++.+      +|||||||++|||++|..|+
T Consensus       181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~  252 (337)
T 3mdy_A          181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSG  252 (337)
T ss_dssp             EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBT
T ss_pred             EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcc
Confidence            9999999996543221       24578999999999988766655      99999999999999995444


No 232
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=1.8e-38  Score=369.92  Aligned_cols=206  Identities=24%  Similarity=0.351  Sum_probs=178.8

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .++|++.++||+|+||+||+|++.. +..||||+++......+.+.+|+++|+.|       .|+||+++++++.. +.+
T Consensus       266 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l-------~hpniv~~~~~~~~-~~~  336 (535)
T 2h8h_A          266 RESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKL-------RHEKLVQLYAVVSE-EPI  336 (535)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHC-------CCTTBCCEEEEECS-SSC
T ss_pred             hhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhC-------CCCCEeeEEEEEee-ccc
Confidence            3789999999999999999998765 46799999987655567899999999999       68999999999876 679


Q ss_pred             EEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          188 CICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       188 ~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      |||||||. ++|.+++.......+++.+++.|+.||+.||+|||+++||||||||+||||+   .++.+||+|||+++..
T Consensus       337 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          337 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLARLI  413 (535)
T ss_dssp             EEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCTTSTTTC
T ss_pred             eEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc---CCCcEEEcccccceec
Confidence            99999997 5999999765545699999999999999999999999999999999999995   5678999999999765


Q ss_pred             CCcc----eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 003239          267 DRTV----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM  325 (837)
Q Consensus       267 ~~~~----~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I  325 (837)
                      ....    ....++..|+|||++....++.++|||||||+||||++ |+.||.+....+.+..+
T Consensus       414 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i  477 (535)
T 2h8h_A          414 EDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV  477 (535)
T ss_dssp             CCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHH
T ss_pred             CCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            4322    22345778999999998899999999999999999999 99999888776665544


No 233
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=4.9e-39  Score=347.93  Aligned_cols=199  Identities=23%  Similarity=0.271  Sum_probs=171.9

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecce
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH  186 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~  186 (837)
                      .++|++.+.||+|+||+||+|++. +++.||||++... ....+.+.+|+.+++.+       .||||+++++++...+.
T Consensus        38 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~~~~~  109 (321)
T 2qkw_B           38 TNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFC-------RHPHLVSLIGFCDERNE  109 (321)
T ss_dssp             CCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSC-------CCTTBCCEEEECCCTTC
T ss_pred             HhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhC-------CCCCEeeEEEEEcCCCe
Confidence            478999999999999999999864 6889999998754 34456788899988877       68999999999999999


Q ss_pred             EEEEEeccc-hhHHHHHHhhcc--CCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          187 LCICFELLD-SNLYELIKINHF--RGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       187 l~LVmEy~~-gsL~d~l~~~~~--~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      .++||||+. ++|.+++.....  ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~  186 (321)
T 2qkw_B          110 MILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD---ENFVPKITDFGIS  186 (321)
T ss_dssp             CEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEEC---TTCCEEECCCTTC
T ss_pred             EEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEEC---CCCCEEEeecccc
Confidence            999999997 588887754432  2489999999999999999999999999999999999995   6789999999999


Q ss_pred             cccCC-----cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          264 CTEDR-----TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       264 ~~~~~-----~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                      .....     ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+..
T Consensus       187 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~  245 (321)
T 2qkw_B          187 KKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSL  245 (321)
T ss_dssp             EECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSS
T ss_pred             cccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccC
Confidence            65322     1233468999999999999899999999999999999999999997653


No 234
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=1.7e-39  Score=366.34  Aligned_cols=204  Identities=18%  Similarity=0.161  Sum_probs=158.9

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhccc---------CC------C
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKY---------DR------E  169 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~---------~~------~  169 (837)
                      +.|++.++||+|+||+||+|++..+++.||||+++..    ....+.+.+|+.+++.+.+..         ..      .
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            5689999999999999999999999999999999832    223467788998888875410         00      0


Q ss_pred             CCCceeEEeEEEee-----cceEEEEEeccchhHHHHHHhh-----ccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccC
Q 003239          170 DKHHIVRIYEYFVC-----QRHLCICFELLDSNLYELIKIN-----HFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDL  239 (837)
Q Consensus       170 ~HpnIVkl~d~f~~-----~~~l~LVmEy~~gsL~d~l~~~-----~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDL  239 (837)
                      ..++...+..++..     ...++++|+++.++|.+++...     ....+++..+..++.||+.||+|||++|||||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi  237 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  237 (413)
T ss_dssp             ECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence            00111112222222     2357899999999999888522     1234788899999999999999999999999999


Q ss_pred             CCCCeeeeccCCCCeEEEEecccccccCCcceeeccCccccCchhh----------cCCCCCccchHHHHHHHHHHHHhC
Q 003239          240 KPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVL----------LGYQYTTAIDMWSFGCIVAELFLG  309 (837)
Q Consensus       240 KPeNILl~~~~~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl----------~~~~yt~ksDIWSLG~ILyELltG  309 (837)
                      ||+||||+   .++.+||+|||+++.........+| +.|+|||++          ....++.++|||||||++|||++|
T Consensus       238 Kp~NILl~---~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg  313 (413)
T 3dzo_A          238 RPVDIVLD---QRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCA  313 (413)
T ss_dssp             CGGGEEEC---TTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHS
T ss_pred             ccceEEEe---cCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHC
Confidence            99999996   6678999999999877766667788 999999999          555788999999999999999999


Q ss_pred             CCCCCCC
Q 003239          310 LPLFPGA  316 (837)
Q Consensus       310 ~~PF~g~  316 (837)
                      +.||...
T Consensus       314 ~~Pf~~~  320 (413)
T 3dzo_A          314 DLPNTDD  320 (413)
T ss_dssp             SCCCCTT
T ss_pred             CCCCCCc
Confidence            9999654


No 235
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=3.7e-38  Score=334.28  Aligned_cols=206  Identities=24%  Similarity=0.387  Sum_probs=166.2

Q ss_pred             CCceEEEEEeccCCceeEEEeeccC-CC--eEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAE-MN--SFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~-tg--~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      .++|++.++||+|+||+||+|++.. ++  ..||||+++..    ....+.+.+|+++++.+       .|+||++++++
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~i~~~~~~   89 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-------DHRNLIRLYGV   89 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHC-------CCTTBCCEEEE
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhC-------CCCCcccEEEE
Confidence            3799999999999999999997543 33  36999999743    34567788999999998       58999999999


Q ss_pred             EeecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          181 FVCQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       181 f~~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      +.... .++||||+. ++|.+++.... ..+++..++.++.||+.||.|||+++|+||||||+|||++   .++.+||+|
T Consensus        90 ~~~~~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~---~~~~~kl~D  164 (291)
T 1u46_A           90 VLTPP-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA---TRDLVKIGD  164 (291)
T ss_dssp             ECSSS-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECC
T ss_pred             EccCC-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEc---CCCCEEEcc
Confidence            98765 899999997 68998887653 4599999999999999999999999999999999999996   567899999


Q ss_pred             cccccccCCcc------eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 003239          260 FGSACTEDRTV------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM  325 (837)
Q Consensus       260 FGlA~~~~~~~------~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I  325 (837)
                      ||++.......      ....++..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+.+..+
T Consensus       165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~  237 (291)
T 1u46_A          165 FGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI  237 (291)
T ss_dssp             CTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred             ccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHH
Confidence            99997653321      22356778999999998899999999999999999999 99999887766555443


No 236
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=6.1e-38  Score=339.64  Aligned_cols=194  Identities=28%  Similarity=0.377  Sum_probs=166.0

Q ss_pred             CceEEEEEeccCCceeEEEe----eccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          109 RRYIVKDLLGHGTFGQVAKC----WDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka----~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      +.|+++++||+|+||+||++    .+..+++.||||+++..  ....+.+.+|+++|+.+       .|+||+++++++.
T Consensus        31 r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~  103 (318)
T 3lxp_A           31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL-------YHEHIIKYKGCCE  103 (318)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEEE
T ss_pred             HHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhC-------CCcchhhEEEEEe
Confidence            34599999999999999665    45668999999999864  34456788999999999       5899999999999


Q ss_pred             ec--ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          183 CQ--RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       183 ~~--~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      ..  ..+++||||+. ++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|
T Consensus       104 ~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~---~~~~~kl~D  177 (318)
T 3lxp_A          104 DAGAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD---NDRLVKIGD  177 (318)
T ss_dssp             ETTTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECC
T ss_pred             cCCCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEc---CCCCEEECC
Confidence            84  68999999997 4898888654   499999999999999999999999999999999999995   668899999


Q ss_pred             cccccccCCc------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 003239          260 FGSACTEDRT------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG  315 (837)
Q Consensus       260 FGlA~~~~~~------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g  315 (837)
                      ||++......      .....++..|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus       178 fg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~  239 (318)
T 3lxp_A          178 FGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS  239 (318)
T ss_dssp             GGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             ccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccc
Confidence            9999765432      2234578889999999998999999999999999999999999954


No 237
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=4.7e-39  Score=348.02  Aligned_cols=196  Identities=24%  Similarity=0.307  Sum_probs=168.4

Q ss_pred             CCceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh--hHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA--YYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~--~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      .++|++.++||+|+||+||+|++ .+++.||||+++....  ....+.+|+++++.+       .|+||+++++++...+
T Consensus        29 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~~  100 (326)
T 3uim_A           29 SDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMA-------VHRNLLRLRGFCMTPT  100 (326)
T ss_dssp             TTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTC-------CCTTBCCCCEEECCSS
T ss_pred             hhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhc-------cCCCccceEEEEecCC
Confidence            47899999999999999999975 4688999999975432  223577888888777       6899999999999999


Q ss_pred             eEEEEEeccch-hHHHHHHhhcc--CCCCHHHHHHHHHhHHHHHhhhhcC---CeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          186 HLCICFELLDS-NLYELIKINHF--RGLSLSIVQLFSKQILRGLSLLKDA---GIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       186 ~l~LVmEy~~g-sL~d~l~~~~~--~~L~e~~i~~I~~QIl~aL~yLHs~---gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      ..++||||+.+ +|.+++.....  ..+++..++.++.||+.||+|||++   ||+||||||+|||++   .++.+||+|
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~---~~~~~kl~D  177 (326)
T 3uim_A          101 ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD---EEFEAVVGD  177 (326)
T ss_dssp             CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC---TTCCEEECC
T ss_pred             ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC---CCCCEEecc
Confidence            99999999975 89988876532  3499999999999999999999999   999999999999995   668999999


Q ss_pred             cccccccCCc----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCC
Q 003239          260 FGSACTEDRT----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFP  314 (837)
Q Consensus       260 FGlA~~~~~~----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~  314 (837)
                      ||++......    .....||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence            9999754322    233468999999999998899999999999999999999999995


No 238
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=9.7e-38  Score=334.44  Aligned_cols=196  Identities=26%  Similarity=0.397  Sum_probs=167.7

Q ss_pred             ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       110 ~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~-----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .|...++||+|+||+||+|++  +++.||||++...     ....+.+.+|+.+++.+       .||||+++++++...
T Consensus        32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l-------~h~~i~~~~~~~~~~  102 (307)
T 2nru_A           32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKC-------QHENLVELLGFSSDG  102 (307)
T ss_dssp             TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHC-------CCTTBCCEEEEECSS
T ss_pred             ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhc-------CCCCeEEEEEEEecC
Confidence            344558899999999999976  5789999999742     23457788999999998       589999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhc-cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          185 RHLCICFELLD-SNLYELIKINH-FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~-~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                      +..++||||+. ++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+
T Consensus       103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~Dfg~  179 (307)
T 2nru_A          103 DDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD---EAFTAKISDFGL  179 (307)
T ss_dssp             SSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTT
T ss_pred             CceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEc---CCCcEEEeeccc
Confidence            99999999996 68988887543 34599999999999999999999999999999999999995   678999999999


Q ss_pred             ccccCCc-----ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH
Q 003239          263 ACTEDRT-----VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE  318 (837)
Q Consensus       263 A~~~~~~-----~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~  318 (837)
                      +......     .....+|+.|+|||++.+ .++.++|||||||++|+|++|.+||.....
T Consensus       180 ~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~  239 (307)
T 2nru_A          180 ARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHRE  239 (307)
T ss_dssp             CEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBS
T ss_pred             ccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcc
Confidence            8754332     223478999999999876 589999999999999999999999976543


No 239
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4e-38  Score=350.85  Aligned_cols=201  Identities=22%  Similarity=0.327  Sum_probs=161.5

Q ss_pred             CceEEEEEeccCCceeEEEeeccCC---CeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEM---NSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~t---g~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      ..|++.++||+|+||+||+|++..+   ...||||+++..  ....+.+.+|+.+++.+       .||||+++++++..
T Consensus        89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l-------~hpnIv~~~~~~~~  161 (373)
T 3c1x_A           89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF-------SHPNVLSLLGICLR  161 (373)
T ss_dssp             EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC-------CCTTBCCCCEEECC
T ss_pred             ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC-------CCCCcceEEEEEEc
Confidence            5789999999999999999986543   356899998753  34567788899988887       68999999998654


Q ss_pred             -cceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          184 -QRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       184 -~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                       ++..++||||+.+ +|.+++.... ..+++..++.++.||+.||+|||++|||||||||+|||++   .++.+||+|||
T Consensus       162 ~~~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL~DFG  237 (373)
T 3c1x_A          162 SEGSPLVVLPYMKHGDLRNFIRNET-HNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFG  237 (373)
T ss_dssp             CSSCCEEEEECCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCC-
T ss_pred             CCCCeEEEEECCCCCCHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEEC---CCCCEEEeecc
Confidence             5688999999984 9999887543 4589999999999999999999999999999999999995   67899999999


Q ss_pred             cccccCCc-------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHH
Q 003239          262 SACTEDRT-------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFD  320 (837)
Q Consensus       262 lA~~~~~~-------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e  320 (837)
                      +++.....       .....+++.|+|||++.+..++.++|||||||++|||++ |.+||...+..+
T Consensus       238 ~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~  304 (373)
T 3c1x_A          238 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD  304 (373)
T ss_dssp             --------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC
T ss_pred             ccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH
Confidence            99754221       123456788999999999999999999999999999999 788887655433


No 240
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=2.5e-37  Score=335.82  Aligned_cols=186  Identities=23%  Similarity=0.302  Sum_probs=160.8

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc---
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR---  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~---  185 (837)
                      ++|++.+.||+|+||+||+|++  +++.||||+++...  ...+.+|+++++.+.     ..|+||+++++++....   
T Consensus        42 ~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~-----l~h~ni~~~~~~~~~~~~~~  112 (342)
T 1b6c_B           42 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWFREAEIYQTVM-----LRHENILGFIAADNKDNGTW  112 (342)
T ss_dssp             HHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHHHHSC-----CCCTTBCCEEEEEECCCSSC
T ss_pred             ccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCchh--HHHHHHHHHHHHHhh-----cCCCcEEEEEeeecccCCcc
Confidence            7899999999999999999976  58999999997543  456778999888853     26999999999999876   


Q ss_pred             -eEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhh--------cCCeeeccCCCCCeeeeccCCCCeE
Q 003239          186 -HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK--------DAGIIHCDLKPENILLCTSVKPAEI  255 (837)
Q Consensus       186 -~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLH--------s~gIVHrDLKPeNILl~~~~~~~~I  255 (837)
                       .+|+||||+.+ +|.+++...   .+++..++.++.||+.||.|||        +++|+||||||+|||++   .++.+
T Consensus       113 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~---~~~~~  186 (342)
T 1b6c_B          113 TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTC  186 (342)
T ss_dssp             CCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC---TTSCE
T ss_pred             ceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC---CCCCE
Confidence             89999999985 999998754   4999999999999999999999        89999999999999995   66789


Q ss_pred             EEEecccccccCCc-------ceeeccCccccCchhhcCC------CCCccchHHHHHHHHHHHHhC
Q 003239          256 KIIDFGSACTEDRT-------VYSYIQSRYYRSPEVLLGY------QYTTAIDMWSFGCIVAELFLG  309 (837)
Q Consensus       256 KL~DFGlA~~~~~~-------~~~~~GT~~Y~APEvl~~~------~yt~ksDIWSLG~ILyELltG  309 (837)
                      ||+|||++......       .....+|+.|+|||++.+.      .++.++|||||||++|||++|
T Consensus       187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg  253 (342)
T 1b6c_B          187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARR  253 (342)
T ss_dssp             EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhc
Confidence            99999999654322       2344789999999999876      344789999999999999999


No 241
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=3.1e-39  Score=352.13  Aligned_cols=198  Identities=17%  Similarity=0.180  Sum_probs=160.2

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---------hhHHHHHHHHHHHHHhhcc--cCCCCCCceeEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---------AYYQQALVEVSILTTLNKK--YDREDKHHIVRI  177 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~---------~~~~~~~~Ei~iL~~L~~~--~~~~~HpnIVkl  177 (837)
                      ++|+++++||+|+||+||+|++  +++.||||+++...         ...+.+.+|+.+|++++..  .....|+||+++
T Consensus        20 ~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l   97 (336)
T 2vuw_A           20 EKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL   97 (336)
T ss_dssp             HHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred             ccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence            7899999999999999999987  68999999998542         2347788999999999632  112246677776


Q ss_pred             eEEEe-----------------e-------------cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHH
Q 003239          178 YEYFV-----------------C-------------QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGL  226 (837)
Q Consensus       178 ~d~f~-----------------~-------------~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL  226 (837)
                      ++++.                 .             .+.+|||||||. |++++.+..   +.+++..++.+++||+.||
T Consensus        98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL  174 (336)
T 2vuw_A           98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL  174 (336)
T ss_dssp             EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred             cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence            66543                 2             678999999997 456665533   4589999999999999999


Q ss_pred             hhhh-cCCeeeccCCCCCeeeeccC-----------------CCCeEEEEecccccccCCcceeeccCccccCchhhcCC
Q 003239          227 SLLK-DAGIIHCDLKPENILLCTSV-----------------KPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGY  288 (837)
Q Consensus       227 ~yLH-s~gIVHrDLKPeNILl~~~~-----------------~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~~  288 (837)
                      +||| ++|||||||||+||||+.+.                 ....+||+|||+|+.....  ..+||+.|+|||++.+.
T Consensus       175 ~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~--~~~gt~~y~aPE~~~g~  252 (336)
T 2vuw_A          175 AVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG--IVVFCDVSMDEDLFTGD  252 (336)
T ss_dssp             HHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--EEECCCCTTCSGGGCCC
T ss_pred             HHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--cEEEeecccChhhhcCC
Confidence            9999 99999999999999997432                 1128999999999765443  45899999999999876


Q ss_pred             CCCccchHHHHHHH-HHHHHhCCCCCC
Q 003239          289 QYTTAIDMWSFGCI-VAELFLGLPLFP  314 (837)
Q Consensus       289 ~yt~ksDIWSLG~I-LyELltG~~PF~  314 (837)
                      . +.++|||||+++ .++++.|..||.
T Consensus       253 ~-~~~~Diwsl~~~~~~~~~~g~~p~~  278 (336)
T 2vuw_A          253 G-DYQFDIYRLMKKENNNRWGEYHPYS  278 (336)
T ss_dssp             S-SHHHHHHHHHHHHHTTCTTSCCTHH
T ss_pred             C-ccceehhhhhCCCCcccccccCCCc
Confidence            6 899999998777 778888999883


No 242
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=5.5e-37  Score=332.91  Aligned_cols=197  Identities=25%  Similarity=0.393  Sum_probs=170.1

Q ss_pred             CCceEEEEEeccCCceeEEEee----ccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCW----DAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~----~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      .++|+++++||+|+||.||+|+    +..+++.||||+++.. ....+.+.+|+++++.+       .|+||+++++++.
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-------~h~~iv~~~~~~~  112 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL-------QHDNIVKYKGVCY  112 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTC-------CCTTBCCEEEEEC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhC-------CCCCeeeEEEEEE
Confidence            4789999999999999999998    5678999999999754 34556788999999988       5899999999987


Q ss_pred             ecc--eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          183 CQR--HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       183 ~~~--~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      ..+  .+++||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|
T Consensus       113 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---~~~~~kL~D  188 (326)
T 2w1i_A          113 SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGD  188 (326)
T ss_dssp             C----CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE---ETTEEEECC
T ss_pred             ecCCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEc---CCCcEEEec
Confidence            654  7899999997 59999887653 4599999999999999999999999999999999999996   567999999


Q ss_pred             cccccccCCcc------eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 003239          260 FGSACTEDRTV------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG  315 (837)
Q Consensus       260 FGlA~~~~~~~------~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g  315 (837)
                      ||++.......      ....++..|+|||++.+..++.++|||||||++|||++|..||..
T Consensus       189 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~  250 (326)
T 2w1i_A          189 FGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS  250 (326)
T ss_dssp             CTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred             CcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCC
Confidence            99997654321      123467789999999998999999999999999999999998853


No 243
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=6.5e-37  Score=364.01  Aligned_cols=205  Identities=26%  Similarity=0.409  Sum_probs=170.2

Q ss_pred             CceEEE-EEeccCCceeEEEee--ccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          109 RRYIVK-DLLGHGTFGQVAKCW--DAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       109 ~~Y~i~-~~LG~G~fG~Vyka~--~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      ..+.+. ++||+|+||+||+|.  ...+++.||||+++..   ....+.+.+|+++|++|       .|+|||++++++.
T Consensus       368 ~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l-------~hpnIv~l~~~~~  440 (635)
T 4fl3_A          368 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL-------DNPYIVRMIGICE  440 (635)
T ss_dssp             GGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHC-------CCTTBCCEEEEEE
T ss_pred             hhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhC-------CCCCEeeEEEEEe
Confidence            345554 489999999999994  4567789999999853   23467899999999999       6899999999986


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      . +..+||||||. ++|.+++...  ..+++..++.|+.||+.||+|||+++||||||||+||||+   .++.+||+|||
T Consensus       441 ~-~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~---~~~~~kL~DFG  514 (635)
T 4fl3_A          441 A-ESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---TQHYAKISDFG  514 (635)
T ss_dssp             S-SSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCTT
T ss_pred             c-CCEEEEEEccCCCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEe---CCCCEEEEEcC
Confidence            4 56899999997 5898888654  4699999999999999999999999999999999999996   56799999999


Q ss_pred             cccccCCc------ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 003239          262 SACTEDRT------VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMI  326 (837)
Q Consensus       262 lA~~~~~~------~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I~  326 (837)
                      +++.....      .....+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.+..+....+.
T Consensus       515 la~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~  586 (635)
T 4fl3_A          515 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE  586 (635)
T ss_dssp             HHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred             CccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99754322      122345788999999999999999999999999999998 999999887766555443


No 244
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=8.2e-39  Score=340.75  Aligned_cols=190  Identities=22%  Similarity=0.292  Sum_probs=147.8

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc---
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR---  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~---  185 (837)
                      ++|++.++||+|+||+||+|++  +++.||||+++...  ...+.+|.+++..+.     ..|+||+++++++....   
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~e~~~~~~~~-----~~h~~i~~~~~~~~~~~~~~   73 (303)
T 3gxj_A            3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWFREAEIYQTVM-----LRHENILGFIAADNKDNGTW   73 (303)
T ss_dssp             GGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-TT--HHHHHHHHHHHTSTT-----CCC-CBCCEEEEEEEECSSS
T ss_pred             ceeeehhhccCCCCeEEEEEEE--cCcceEEEEecccc--hhhHHHHHHHHHHHh-----ccCcceeeeeeecccCCCcc
Confidence            6899999999999999999966  48899999997543  355667877777642     27999999999999876   


Q ss_pred             -eEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhh--------cCCeeeccCCCCCeeeeccCCCCeE
Q 003239          186 -HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK--------DAGIIHCDLKPENILLCTSVKPAEI  255 (837)
Q Consensus       186 -~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLH--------s~gIVHrDLKPeNILl~~~~~~~~I  255 (837)
                       .+++||||+.+ +|.+++...   .+++..++.++.||+.||+|||        +++||||||||+|||++   .++.+
T Consensus        74 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~---~~~~~  147 (303)
T 3gxj_A           74 TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTC  147 (303)
T ss_dssp             EEEEEEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CC---TTCCC
T ss_pred             ceeEEEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEEC---CCCCE
Confidence             89999999985 999998654   4888999999999999999999        99999999999999995   66789


Q ss_pred             EEEecccccccCCcc-------eeeccCccccCchhhcCC------CCCccchHHHHHHHHHHHHhCCCCC
Q 003239          256 KIIDFGSACTEDRTV-------YSYIQSRYYRSPEVLLGY------QYTTAIDMWSFGCIVAELFLGLPLF  313 (837)
Q Consensus       256 KL~DFGlA~~~~~~~-------~~~~GT~~Y~APEvl~~~------~yt~ksDIWSLG~ILyELltG~~PF  313 (837)
                      ||+|||++.......       ...+||+.|+|||++.+.      .++.++|||||||++|||++|.+++
T Consensus       148 kl~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~  218 (303)
T 3gxj_A          148 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             -BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBT
T ss_pred             EEeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCc
Confidence            999999996433221       233789999999999876      4457899999999999999995554


No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=1.7e-38  Score=377.32  Aligned_cols=203  Identities=27%  Similarity=0.400  Sum_probs=175.0

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee---
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC---  183 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~---  183 (837)
                      ++|++.++||+|+||+||+|.+..+++.||||+++..  ....+.+.+|+++++.+       .||||+++++++..   
T Consensus        14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L-------~HpnIV~l~~v~~~~~~   86 (676)
T 3qa8_A           14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-------NHPNVVSAREVPDGLQK   86 (676)
T ss_dssp             ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHC-------CBTTBCCEEECCTTTCC
T ss_pred             CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhC-------CCCCCCceeeeeccccc
Confidence            7899999999999999999999999999999999753  44566788999999999       68999999999766   


Q ss_pred             ---cceEEEEEeccc-hhHHHHHHhhc-cCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEE
Q 003239          184 ---QRHLCICFELLD-SNLYELIKINH-FRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKII  258 (837)
Q Consensus       184 ---~~~l~LVmEy~~-gsL~d~l~~~~-~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~  258 (837)
                         .+..|||||||. ++|.+++.... ...+++..++.++.||+.||+|||++|||||||||+|||++.+.....+||+
T Consensus        87 ~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~  166 (676)
T 3qa8_A           87 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKII  166 (676)
T ss_dssp             CCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred             ccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEc
Confidence               678899999996 59999887643 2359999999999999999999999999999999999999855555669999


Q ss_pred             ecccccccCCc--ceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCH
Q 003239          259 DFGSACTEDRT--VYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASE  318 (837)
Q Consensus       259 DFGlA~~~~~~--~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s~  318 (837)
                      |||++......  .....+|+.|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus       167 DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~  228 (676)
T 3qa8_A          167 DLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ  228 (676)
T ss_dssp             SCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH
T ss_pred             ccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc
Confidence            99999765432  3456889999999999999999999999999999999999999976543


No 246
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=8.7e-37  Score=361.50  Aligned_cols=205  Identities=22%  Similarity=0.315  Sum_probs=170.5

Q ss_pred             CceEEEE-EeccCCceeEEEeecc--CCCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEee
Q 003239          109 RRYIVKD-LLGHGTFGQVAKCWDA--EMNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVC  183 (837)
Q Consensus       109 ~~Y~i~~-~LG~G~fG~Vyka~~~--~tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~  183 (837)
                      +++.+.+ .||+|+||+||+|.+.  .++..||||+++..  ....+.+.+|+++|+.+       .|+|||++++++..
T Consensus       335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l-------~hpniv~l~~~~~~  407 (613)
T 2ozo_A          335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL-------DNPYIVRLIGVCQA  407 (613)
T ss_dssp             TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTC-------CCTTBCCEEEEEES
T ss_pred             cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhC-------CCCCEeeEEEEecc
Confidence            5666666 8999999999999765  45678999999853  34567889999999888       68999999999976


Q ss_pred             cceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccc
Q 003239          184 QRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGS  262 (837)
Q Consensus       184 ~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGl  262 (837)
                       +.++||||||. ++|.+++... ...+++..++.++.||+.||+|||+++||||||||+||||+   .++.+||+|||+
T Consensus       408 -~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~---~~~~vkL~DFGl  482 (613)
T 2ozo_A          408 -EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLV---NRHYAKISDFGL  482 (613)
T ss_dssp             -SSEEEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCST
T ss_pred             -CCeEEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEc---CCCcEEEeeccC
Confidence             56999999998 5888887644 35699999999999999999999999999999999999996   668999999999


Q ss_pred             ccccCCcc------eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Q 003239          263 ACTEDRTV------YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRM  325 (837)
Q Consensus       263 A~~~~~~~------~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I  325 (837)
                      ++......      ....+++.|+|||++.+..++.++|||||||+||||++ |+.||.+.+..+.+..+
T Consensus       483 a~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i  552 (613)
T 2ozo_A          483 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI  552 (613)
T ss_dssp             TTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHH
T ss_pred             cccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence            97643221      12234678999999998999999999999999999998 99999887766655444


No 247
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=7.1e-36  Score=356.34  Aligned_cols=207  Identities=24%  Similarity=0.384  Sum_probs=174.5

Q ss_pred             CCceEEEEEeccCCceeEEEeeccC---CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          108 QRRYIVKDLLGHGTFGQVAKCWDAE---MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       108 ~~~Y~i~~~LG~G~fG~Vyka~~~~---tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      .++|++.+.||+|+||+||+|++..   .+..||||+++..  ....+.+.+|+.+|+.+       .||||+++++++.
T Consensus       389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~HpnIv~l~~~~~  461 (656)
T 2j0j_A          389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF-------DHPHIVKLIGVIT  461 (656)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHC-------CCTTBCCEEEEEC
T ss_pred             cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhC-------CCCCCCeEEEEEe
Confidence            4789999999999999999998754   3568999998753  34456788999999998       6899999999985


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                       ++..|+||||+. ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||
T Consensus       462 -~~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~---~~~~vkL~DFG  536 (656)
T 2j0j_A          462 -ENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFG  536 (656)
T ss_dssp             -SSSCEEEEECCTTCBHHHHHHHTT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---ETTEEEECCCC
T ss_pred             -cCceEEEEEcCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEe---CCCCEEEEecC
Confidence             567899999998 68998887553 4599999999999999999999999999999999999996   56899999999


Q ss_pred             cccccCCcc----eeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH
Q 003239          262 SACTEDRTV----YSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL-GLPLFPGASEFDLLRRMI  326 (837)
Q Consensus       262 lA~~~~~~~----~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt-G~~PF~g~s~~e~l~~I~  326 (837)
                      ++.......    ....+++.|+|||++.+..++.++|||||||++|||++ |.+||.+....+.+..+.
T Consensus       537 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~  606 (656)
T 2j0j_A          537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE  606 (656)
T ss_dssp             CCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred             CCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            997654322    22356788999999998899999999999999999997 999999887776655543


No 248
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=3.7e-37  Score=331.26  Aligned_cols=202  Identities=21%  Similarity=0.305  Sum_probs=166.3

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC---hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ---PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~---~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|++.++||+|+||.||+|++..   .||||+++..   ....+.+.+|+.+++.+       .|+||+++++++...+
T Consensus        33 ~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l-------~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           33 EQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQT-------RHENVVLFMGACMSPP  102 (319)
T ss_dssp             SCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTC-------CCTTBCCCCEEEECSS
T ss_pred             HHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcC-------CCCCEeEEEEEEecCC
Confidence            789999999999999999998754   3999998743   22234556788888777       6899999999999999


Q ss_pred             eEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          186 HLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       186 ~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                      .+++||||+. ++|.+++.... ..+++..++.++.||+.||+|||++||+||||||+|||++    ++.+||+|||++.
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~----~~~~~l~Dfg~~~  177 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD----NGKVVITDFGLFS  177 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------CCEECCCSCCC
T ss_pred             ceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe----CCCEEEeecCCcc
Confidence            9999999997 58888876542 4699999999999999999999999999999999999994    4689999999975


Q ss_pred             ccC--------CcceeeccCccccCchhhcC---------CCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Q 003239          265 TED--------RTVYSYIQSRYYRSPEVLLG---------YQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLRRM  325 (837)
Q Consensus       265 ~~~--------~~~~~~~GT~~Y~APEvl~~---------~~yt~ksDIWSLG~ILyELltG~~PF~g~s~~e~l~~I  325 (837)
                      ...        .......+++.|+|||++.+         ..++.++|||||||++|||++|..||......+....+
T Consensus       178 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~  255 (319)
T 2y4i_B          178 ISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQM  255 (319)
T ss_dssp             ----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHH
T ss_pred             ccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh
Confidence            432        12233468899999999975         35789999999999999999999999887766554443


No 249
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=1.3e-35  Score=318.26  Aligned_cols=171  Identities=15%  Similarity=0.128  Sum_probs=149.8

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC----hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ----PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~----~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      ++|++.++||+|+||+||+|++..+++.||||+++..    ....+.+.+|+.++..+       .|+||+++++++...
T Consensus        31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-------~hp~iv~~~~~~~~~  103 (286)
T 3uqc_A           31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI-------DKPGVARVLDVVHTR  103 (286)
T ss_dssp             TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC-------CCTTBCCEEEEEEET
T ss_pred             CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC-------CCCCcceeeEEEEEC
Confidence            7899999999999999999999999999999999854    34457788899998877       689999999999999


Q ss_pred             ceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +..||||||+. ++|.++++.    .....++..++.||+.||+|||++||+||||||+|||++   .++.+||++++  
T Consensus       104 ~~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~---~~g~~kl~~~~--  174 (286)
T 3uqc_A          104 AGGLVVAEWIRGGSLQEVADT----SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS---IDGDVVLAYPA--  174 (286)
T ss_dssp             TEEEEEEECCCEEEHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---TTSCEEECSCC--
T ss_pred             CcEEEEEEecCCCCHHHHHhc----CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEc---CCCCEEEEecc--
Confidence            99999999997 588888743    246667889999999999999999999999999999996   66889998543  


Q ss_pred             cccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCCCC
Q 003239          264 CTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGAS  317 (837)
Q Consensus       264 ~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g~s  317 (837)
                                     |++       .++.++|||||||++|||++|+.||.+.+
T Consensus       175 ---------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~  206 (286)
T 3uqc_A          175 ---------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAG  206 (286)
T ss_dssp             ---------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCS
T ss_pred             ---------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence                           333       37899999999999999999999997653


No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=4e-36  Score=359.56  Aligned_cols=190  Identities=26%  Similarity=0.362  Sum_probs=163.0

Q ss_pred             CceEEEEEeccCCceeEEEeeccC-CCeEEEEEEEeCC--hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAE-MNSFVAVKIIKNQ--PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~-tg~~VAIKiik~~--~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++|+++++||+|+||+||+|++.. +++.||||++...  ......+.+|+.+|+++       .||||+++++++...+
T Consensus        80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-------~hp~iv~~~~~~~~~~  152 (681)
T 2pzi_A           80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV-------VHPSIVQIFNFVEHTD  152 (681)
T ss_dssp             TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC-------CCTTBCCEEEEEEEEC
T ss_pred             CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc-------CCCCcCeEeeeEeecC
Confidence            799999999999999999999876 7899999998643  34456678899998887       6899999999999876


Q ss_pred             e-----EEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          186 H-----LCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       186 ~-----l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      .     .||||||+. ++|.+++..    .+++.+++.|+.||+.||.|||++|||||||||+|||++   . +.+||+|
T Consensus       153 ~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~---~-~~~kl~D  224 (681)
T 2pzi_A          153 RHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT---E-EQLKLID  224 (681)
T ss_dssp             TTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---S-SCEEECC
T ss_pred             CCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEe---C-CcEEEEe
Confidence            5     799999998 477766543    599999999999999999999999999999999999996   2 4899999


Q ss_pred             cccccccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCCCC
Q 003239          260 FGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPG  315 (837)
Q Consensus       260 FGlA~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF~g  315 (837)
                      ||++...... ...+||+.|+|||++.+. ++.++||||||||+|+|++|.+||.+
T Consensus       225 FG~a~~~~~~-~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~  278 (681)
T 2pzi_A          225 LGAVSRINSF-GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNG  278 (681)
T ss_dssp             CTTCEETTCC-SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETT
T ss_pred             cccchhcccC-CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCcc
Confidence            9999766544 456799999999999764 48899999999999999999988853


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94  E-value=1.2e-28  Score=289.61  Aligned_cols=181  Identities=15%  Similarity=0.070  Sum_probs=130.9

Q ss_pred             EeccCCceeEEEeeccCCCeEEEEEEEeCC-----------hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec
Q 003239          116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-----------PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ  184 (837)
Q Consensus       116 ~LG~G~fG~Vyka~~~~tg~~VAIKiik~~-----------~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~  184 (837)
                      .++.|+++.+..++....|+.||||++.++           ....+++.+|+++|+++.      .|+||++++++++++
T Consensus       241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~------~~~~i~~~~~~~ed~  314 (569)
T 4azs_A          241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPP------AGFDAPAVLAHGENA  314 (569)
T ss_dssp             C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCC------TTCCCCCEEEEEECS
T ss_pred             ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcC------CCCCeeEEEEEEEEC
Confidence            467888888888888888999999999753           234567889999999984      589999999999999


Q ss_pred             ceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecccc
Q 003239          185 RHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFGSA  263 (837)
Q Consensus       185 ~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA  263 (837)
                      +.+|||||||+| +|.+++...  +.+++.   .|+.||+.||+|||++|||||||||+||||+   .++.+||+|||+|
T Consensus       315 ~~~yLVMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~---~dg~vKL~DFGlA  386 (569)
T 4azs_A          315 QSGWLVMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVD---ARQHARLIDFGSI  386 (569)
T ss_dssp             SEEEEEEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEEC---TTSCEEECCCTTE
T ss_pred             CEEEEEEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEEC---CCCCEEEeecccC
Confidence            999999999985 899998765  357654   5789999999999999999999999999995   6789999999999


Q ss_pred             cccCC---cceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCC
Q 003239          264 CTEDR---TVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLP  311 (837)
Q Consensus       264 ~~~~~---~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~  311 (837)
                      +....   .....+||+.|+|||++.+ .+..++|+|++|+++++|.++..
T Consensus       387 r~~~~~~~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~  436 (569)
T 4azs_A          387 VTTPQDCSWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWS  436 (569)
T ss_dssp             ESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHH
T ss_pred             eeCCCCCccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccc
Confidence            76543   2345689999999999976 56778999999999888766543


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89  E-value=3.6e-24  Score=249.97  Aligned_cols=178  Identities=17%  Similarity=0.175  Sum_probs=139.0

Q ss_pred             EEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh---------hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP---------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       112 ~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~---------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      ...++||+|+||+||+|  ...++.+|+|+.....         ...+.+.+|+++|+++       .|+||+++..++.
T Consensus       339 ~~~~~LG~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l-------~h~nIv~~~~~~~  409 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALV-------KDFGIPAPYIFDV  409 (540)
T ss_dssp             ---------CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHG-------GGGTCCCCCEEEE
T ss_pred             CCCCEEeeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhc-------CCCCcCceEEEEE
Confidence            45679999999999999  4457789999875321         1234578999999999       5789995555555


Q ss_pred             ecceEEEEEeccc-hhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeeccCCCCeEEEEecc
Q 003239          183 CQRHLCICFELLD-SNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCTSVKPAEIKIIDFG  261 (837)
Q Consensus       183 ~~~~l~LVmEy~~-gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~~~~~~~IKL~DFG  261 (837)
                      ..+..|||||||+ ++|.+++..          ++.++.||++||+|||+++||||||||+|||++   .  .+||+|||
T Consensus       410 ~~~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~---~--~~kL~DFG  474 (540)
T 3en9_A          410 DLDNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD---K--DLYIIDFG  474 (540)
T ss_dssp             ETTTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES---S--SEEECCCT
T ss_pred             eCCccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC---C--eEEEEECc
Confidence            7778899999997 688888754          568999999999999999999999999999995   3  89999999


Q ss_pred             cccccCCc----------ceeeccCccccCchhhcC--CCCCccchHHHHHHHHHHHHhCCCCC
Q 003239          262 SACTEDRT----------VYSYIQSRYYRSPEVLLG--YQYTTAIDMWSFGCIVAELFLGLPLF  313 (837)
Q Consensus       262 lA~~~~~~----------~~~~~GT~~Y~APEvl~~--~~yt~ksDIWSLG~ILyELltG~~PF  313 (837)
                      +++.....          ....+||+.|+|||++..  ..|+..+|+|+..+-..+.+.++.+|
T Consensus       475 la~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          475 LGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             TCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             cCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            99876543          135689999999999987  57888999999998888887776655


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85  E-value=8.8e-22  Score=211.19  Aligned_cols=144  Identities=24%  Similarity=0.300  Sum_probs=115.1

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-------------------hhHHHHHHHHHHHHHhhcccCCC
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-------------------AYYQQALVEVSILTTLNKKYDRE  169 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-------------------~~~~~~~~Ei~iL~~L~~~~~~~  169 (837)
                      ..|.+.+.||+|+||.||+|++ .+++.||||+++...                   .....+.+|+.+|+.++      
T Consensus        90 ~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~------  162 (282)
T 1zar_A           90 KVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ------  162 (282)
T ss_dssp             SCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT------
T ss_pred             eEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc------
Confidence            5677889999999999999999 889999999997432                   13456889999999983      


Q ss_pred             CCCceeEEeEEEeecceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeeec
Q 003239          170 DKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLCT  248 (837)
Q Consensus       170 ~HpnIVkl~d~f~~~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~~  248 (837)
                         | +++.+++. .+..|+||||++| +|.+ +.        ......++.||+.||.|||++|||||||||+|||++ 
T Consensus       163 ---~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~--------~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-  227 (282)
T 1zar_A          163 ---G-LAVPKVYA-WEGNAVLMELIDAKELYR-VR--------VENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-  227 (282)
T ss_dssp             ---T-SSSCCEEE-EETTEEEEECCCCEEGGG-CC--------CSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-
T ss_pred             ---C-CCcCeEEe-ccceEEEEEecCCCcHHH-cc--------hhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-
Confidence               3 44444443 3567999999975 7776 31        123567999999999999999999999999999995 


Q ss_pred             cCCCCeEEEEecccccccCCcceeeccCccccCchhhcC
Q 003239          249 SVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLG  287 (837)
Q Consensus       249 ~~~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~  287 (837)
                         ++.+||+|||+|+.          +..++|||++..
T Consensus       228 ---~~~vkl~DFG~a~~----------~~~~~a~e~l~r  253 (282)
T 1zar_A          228 ---EEGIWIIDFPQSVE----------VGEEGWREILER  253 (282)
T ss_dssp             ---TTEEEECCCTTCEE----------TTSTTHHHHHHH
T ss_pred             ---CCcEEEEECCCCeE----------CCCCCHHHHHHH
Confidence               67899999999953          345789999854


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78  E-value=5.8e-19  Score=186.42  Aligned_cols=139  Identities=20%  Similarity=0.209  Sum_probs=107.0

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeE--EEEEEEeCChhh-------------------------HHHHHHHHHHHHH
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSF--VAVKIIKNQPAY-------------------------YQQALVEVSILTT  161 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~--VAIKiik~~~~~-------------------------~~~~~~Ei~iL~~  161 (837)
                      .-|++.+.||+|+||.||+|.+..+|+.  ||||+++.....                         ...+.+|+.+|+.
T Consensus        47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~  126 (258)
T 1zth_A           47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER  126 (258)
T ss_dssp             SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred             CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence            3478999999999999999998788999  999998643111                         1357889999999


Q ss_pred             hhcccCCCCCCceeEEeEEEeecceEEEEEeccch------hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhh-cCCe
Q 003239          162 LNKKYDREDKHHIVRIYEYFVCQRHLCICFELLDS------NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK-DAGI  234 (837)
Q Consensus       162 L~~~~~~~~HpnIVkl~d~f~~~~~l~LVmEy~~g------sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLH-s~gI  234 (837)
                      |.+.     ..+++.++++    +..+|||||+++      .|.+....     .++..+..++.||+.+|.||| ++||
T Consensus       127 l~~~-----~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~gi  192 (258)
T 1zth_A          127 AKEA-----GVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAEL  192 (258)
T ss_dssp             HHHT-----TCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCE
T ss_pred             HHhC-----CCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCE
Confidence            9653     1123334432    467999999953      55554321     235568899999999999999 9999


Q ss_pred             eeccCCCCCeeeeccCCCCeEEEEeccccccc
Q 003239          235 IHCDLKPENILLCTSVKPAEIKIIDFGSACTE  266 (837)
Q Consensus       235 VHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~  266 (837)
                      |||||||+|||++   .  .++|+|||+|...
T Consensus       193 vHrDlkp~NILl~---~--~~~liDFG~a~~~  219 (258)
T 1zth_A          193 VHADLSEYNIMYI---D--KVYFIDMGQAVTL  219 (258)
T ss_dssp             ECSSCSTTSEEES---S--SEEECCCTTCEET
T ss_pred             EeCCCCHHHEEEc---C--cEEEEECcccccC
Confidence            9999999999995   3  8999999999654


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.60  E-value=1.1e-15  Score=170.97  Aligned_cols=140  Identities=19%  Similarity=0.199  Sum_probs=98.9

Q ss_pred             ceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChh-----------------------hHHHHHHHHHHHHHhhccc
Q 003239          110 RYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPA-----------------------YYQQALVEVSILTTLNKKY  166 (837)
Q Consensus       110 ~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~-----------------------~~~~~~~Ei~iL~~L~~~~  166 (837)
                      -|+|.++||.|+||.||+|.+. +|+.||||+++....                       ....+.+|...|.+|... 
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~-  173 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE-  173 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc-
Confidence            4999999999999999999875 689999999853100                       001234577777777442 


Q ss_pred             CCCCCCceeEEeEEEeecceEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCee
Q 003239          167 DREDKHHIVRIYEYFVCQRHLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENIL  245 (837)
Q Consensus       167 ~~~~HpnIVkl~d~f~~~~~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNIL  245 (837)
                          .-.+...+++    ...+|||||++| .|.++        ........++.||+.+|.+||++|||||||||.|||
T Consensus       174 ----gv~vp~p~~~----~~~~LVME~i~G~~L~~l--------~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NIL  237 (397)
T 4gyi_A          174 ----GFPVPEPIAQ----SRHTIVMSLVDALPMRQV--------SSVPDPASLYADLIALILRLAKHGLIHGDFNEFNIL  237 (397)
T ss_dssp             ----TCSCCCEEEE----ETTEEEEECCSCEEGGGC--------CCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEE
T ss_pred             ----CCCCCeeeec----cCceEEEEecCCccHhhh--------cccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEE
Confidence                1123333332    234799999986 44322        122345678999999999999999999999999999


Q ss_pred             eeccCCC-------CeEEEEecccccccC
Q 003239          246 LCTSVKP-------AEIKIIDFGSACTED  267 (837)
Q Consensus       246 l~~~~~~-------~~IKL~DFGlA~~~~  267 (837)
                      ++.+.+.       ..+.|+||+.+....
T Consensus       238 l~~dgd~~d~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          238 IREEKDAEDPSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             EEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred             EeCCCCcccccccccceEEEEeCCcccCC
Confidence            9743211       148999999886543


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.19  E-value=7.7e-11  Score=123.13  Aligned_cols=138  Identities=14%  Similarity=0.055  Sum_probs=106.7

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      ..|++...++.|+.+.||++...  ++.+++|+..... .....+.+|+.+|+.|..      +..+.++++++...+..
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~------~~~vP~v~~~~~~~~~~   85 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEG------KLPVPKVLHFERHDGWS   85 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT------TSCCCCEEEEEEETTEE
T ss_pred             ccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhc------CCCCCeEEEEEecCCce
Confidence            56889999999999999999643  6789999987421 223457889999999953      45688899998888899


Q ss_pred             EEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhc-----------------------------------
Q 003239          188 CICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD-----------------------------------  231 (837)
Q Consensus       188 ~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs-----------------------------------  231 (837)
                      |+|||+++| +|.+.+       .+......++.++.++|..||+                                   
T Consensus        86 ~lv~e~i~G~~l~~~~-------~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (263)
T 3tm0_A           86 NLLMSEADGVLCSEEY-------EDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENW  158 (263)
T ss_dssp             EEEEECCSSEEHHHHC-------CTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGG
T ss_pred             EEEEEecCCeehhhcc-------CCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccc
Confidence            999999997 554431       1122345778899999999998                                   


Q ss_pred             ------------------------CCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          232 ------------------------AGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       232 ------------------------~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                                              ..++|+|++|.|||++   +...+.|+||+.+.
T Consensus       159 ~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          159 EEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVK---DGKVSGFIDLGRSG  212 (263)
T ss_dssp             STTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEE---TTEEEEECCCTTCE
T ss_pred             cccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEE---CCcEEEEEEchhcc
Confidence                                    4589999999999995   33455799998873


No 257
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.04  E-value=4.9e-10  Score=115.67  Aligned_cols=136  Identities=12%  Similarity=-0.037  Sum_probs=95.4

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLC  188 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~  188 (837)
                      ..|.+..+.+.|..+.||++.. .+++.+++|+....  ....+.+|+.+++.+.+.     .-.+.+++.+....+..+
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~-----~~~vP~~~~~~~~~~~~~   91 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATT-----GVPCAAVLDVVTEAGRDW   91 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTT-----TCCBCCEEEEEECSSCEE
T ss_pred             CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhC-----CCCCCeEEEeccCCCCCE
Confidence            3456655545667799999954 45677999998754  234567899999999641     123667888888888899


Q ss_pred             EEEeccchhHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCC-----------------------------------
Q 003239          189 ICFELLDSNLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG-----------------------------------  233 (837)
Q Consensus       189 LVmEy~~gsL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~g-----------------------------------  233 (837)
                      +|||+++|.-.+ ..     ...   ...++.+++..|..||+..                                   
T Consensus        92 ~v~e~i~G~~l~-~~-----~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (264)
T 1nd4_A           92 LLLGEVPGQDLL-SS-----HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH  162 (264)
T ss_dssp             EEEECCSSEETT-TS-----CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred             EEEEecCCcccC-cC-----cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence            999999873223 11     111   2245666666677776543                                   


Q ss_pred             -----------------------eeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          234 -----------------------IIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       234 -----------------------IVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                                             ++|+|++|.|||++   ....++|+||+.+.
T Consensus       163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~---~~~~~~liD~~~a~  213 (264)
T 1nd4_A          163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVE---NGRFSGFIDCGRLG  213 (264)
T ss_dssp             TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEE---TTEEEEECCCTTCE
T ss_pred             cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEE---CCcEEEEEcchhcc
Confidence                                   99999999999995   33456799999974


No 258
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.90  E-value=3.3e-09  Score=116.29  Aligned_cols=141  Identities=11%  Similarity=0.220  Sum_probs=102.9

Q ss_pred             EEEEeccCCceeEEEeeccCCCeEEEEEEEe--CCh--hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec---c
Q 003239          113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIK--NQP--AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ---R  185 (837)
Q Consensus       113 i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik--~~~--~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~---~  185 (837)
                      .++.|+.|.++.||++...  +..+++|+..  ...  .....+.+|+.+++.|..     .+..+++++.++.+.   +
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~-----~~vpvP~~~~~~~~~~~~g  114 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAG-----TDVPVAKMYALCEDESVIG  114 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTT-----SSSCCCCEEEEECCTTTTS
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhc-----CCCCCCcEEEECCCCCccC
Confidence            3577899999999999654  3568888876  322  223567789999999964     244688888888776   4


Q ss_pred             eEEEEEeccchh-HHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhc---------------------------------
Q 003239          186 HLCICFELLDSN-LYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD---------------------------------  231 (837)
Q Consensus       186 ~l~LVmEy~~gs-L~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs---------------------------------  231 (837)
                      ..++|||+++|. +.+    .....++..+...++.+++..|..||+                                 
T Consensus       115 ~~~~vme~v~G~~l~~----~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (359)
T 3dxp_A          115 RAFYIMEFVSGRVLWD----QSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSE  190 (359)
T ss_dssp             SCEEEEECCCCBCCCC----TTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHC
T ss_pred             CeEEEEEecCCeecCC----CccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcC
Confidence            589999999974 322    112347788888999999999999996                                 


Q ss_pred             -------------------------CCeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          232 -------------------------AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       232 -------------------------~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                                               ..+||+|+++.|||++.+ ....+.|+||+.+..
T Consensus       191 ~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~-~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          191 TESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPT-EPRVLAVLDWELSTL  248 (359)
T ss_dssp             CSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSS-SSCEEEECCCTTCEE
T ss_pred             CcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCC-CCcEEEEECcccccc
Confidence                                     469999999999999632 123469999999854


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.86  E-value=3.3e-09  Score=113.76  Aligned_cols=183  Identities=23%  Similarity=0.216  Sum_probs=117.3

Q ss_pred             EEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc---eEEEEE
Q 003239          115 DLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR---HLCICF  191 (837)
Q Consensus       115 ~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~---~l~LVm  191 (837)
                      +.|+.|....||++.     ..+++|+.... .....+.+|..+|+.+...    ..-.+.+++......+   ..|+||
T Consensus        26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~----~~v~vP~~~~~~~~~~~~~~~~~vm   95 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNK----LPLPIPEVVFTGMPSETYQMSFAGF   95 (304)
T ss_dssp             CEEEECSSEEEEEST-----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTS----SSSCCCCEEEECCCCSSCSCSCEEE
T ss_pred             EecCCCCcceEEEEC-----CEEEEEecCCc-chHHHHHHHHHHHHHHHhc----CCCCCCceEeecCCCCCCCcceEEE
Confidence            358899999999984     34888986543 3456788999999998542    1112445555443333   458999


Q ss_pred             eccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhc---------------------------------------
Q 003239          192 ELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD---------------------------------------  231 (837)
Q Consensus       192 Ey~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs---------------------------------------  231 (837)
                      |+++| .+.+...    ..++.++...++.|++..|..||+                                       
T Consensus        96 ~~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (304)
T 3sg8_A           96 TKIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK  171 (304)
T ss_dssp             ECCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred             cccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence            99997 4433222    136777777777788777777774                                       


Q ss_pred             -------------------CCeeeccCCCCCeeeeccCCCCeEEEEecccccccCCcceeeccCccc---cCchhhcC--
Q 003239          232 -------------------AGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYY---RSPEVLLG--  287 (837)
Q Consensus       232 -------------------~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y---~APEvl~~--  287 (837)
                                         ..++|+|++|.||+++.+ ....+.|+||+.+...+... .......+   ..|+....  
T Consensus       172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~-~~~~~~~iD~~~~~~~~~~~-Dl~~~~~~~~~~~~~~~~~~l  249 (304)
T 3sg8_A          172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE-KNTICGIIDFGDAAISDPDN-DFISLMEDDEEYGMEFVSKIL  249 (304)
T ss_dssp             HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT-TTEEEEECCCTTCEEECTTH-HHHTTCCTTTSCCHHHHHHHH
T ss_pred             HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCC-CCCEEEEEeCCCCccCChHH-HHHHHHhhccccCHHHHHHHH
Confidence                               247999999999999621 14567899999986433211 00001111   22222211  


Q ss_pred             --C----------CCCccchHHHHHHHHHHHHhCCCCC
Q 003239          288 --Y----------QYTTAIDMWSFGCIVAELFLGLPLF  313 (837)
Q Consensus       288 --~----------~yt~ksDIWSLG~ILyELltG~~PF  313 (837)
                        .          ......+.|+++.++|.+.+|..+|
T Consensus       250 ~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          250 NHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence              0          1122368999999999999998766


No 260
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.40  E-value=2.2e-06  Score=92.24  Aligned_cols=138  Identities=20%  Similarity=0.143  Sum_probs=86.7

Q ss_pred             EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe-ecceEEEEEe
Q 003239          114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV-CQRHLCICFE  192 (837)
Q Consensus       114 ~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~-~~~~l~LVmE  192 (837)
                      ++.++.|....||++     ++.+++|+-. .......+.+|..+|+.|.+..    .-.|.+++.+.. ..+..++|||
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~-~~~~~~~~~~E~~~L~~L~~~~----~v~VP~~~~~~~~~~g~~~~v~e   93 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPK-SQQGADELNKEIQLLPLLVGCV----KVNIPQYVYIGKRSDGNPFVGYR   93 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEES-SHHHHHHHHHHHHHHHHHTTTC----SSBCCCEEEEEECTTSCEEEEEE
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecC-CchHHHHHHHHHHHHHHHHhcC----CCCCCCeEeecccCCCceEEEEe
Confidence            345788999999998     3458888854 3344567889999999996421    113556666553 4456789999


Q ss_pred             ccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhh-----------------------------------------
Q 003239          193 LLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK-----------------------------------------  230 (837)
Q Consensus       193 y~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLH-----------------------------------------  230 (837)
                      +++| .+.+...    ..++..+...++.++...|..||                                         
T Consensus        94 ~i~G~~l~~~~~----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~  169 (306)
T 3tdw_A           94 KVQGQILGEDGM----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR  169 (306)
T ss_dssp             CCCSEECHHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred             ccCCeECchhhh----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence            9987 3333110    11233333333333333333333                                         


Q ss_pred             -------------------cCCeeeccCCCCCeeeeccCCCCe-EEEEecccccc
Q 003239          231 -------------------DAGIIHCDLKPENILLCTSVKPAE-IKIIDFGSACT  265 (837)
Q Consensus       231 -------------------s~gIVHrDLKPeNILl~~~~~~~~-IKL~DFGlA~~  265 (837)
                                         ...+||+|+++.|||++.+...+. +.|+||+.+..
T Consensus       170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                               235799999999999963212344 58999998753


No 261
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.37  E-value=1.7e-06  Score=93.48  Aligned_cols=134  Identities=16%  Similarity=0.112  Sum_probs=92.2

Q ss_pred             EEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEEEEE
Q 003239          112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICF  191 (837)
Q Consensus       112 ~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~LVm  191 (837)
                      ..++.|+.|....||++     ++.+++|+.... .....+.+|..+|+.|.+..   ....+.+++.+    +..++||
T Consensus        40 ~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~-~~~~~~~~E~~~L~~L~~~~---~~~~vP~v~~~----~~~~lvm  106 (320)
T 3r70_A           40 NELRYLSSGDDSDTFLC-----NEQYVVKVPKRD-SVRISQKRELELYRFLENCK---LSYQIPAVVYQ----SDRFNIM  106 (320)
T ss_dssp             SCEEEEEECSSEEEEEE-----TTTEEEEEESSH-HHHHHHHHHHHHHHHHTTSC---CSSBCCCEEEE----CSSCEEE
T ss_pred             EEEEeCCCCCCceEEEE-----CCEEEEEeCCcH-HHHHHHHHHHHHHHHHHhcC---CCCCcceEEec----CCcEEEE
Confidence            34677899999999998     455888887543 33456889999999995410   11234555554    5678999


Q ss_pred             eccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcC--------------------------------------
Q 003239          192 ELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDA--------------------------------------  232 (837)
Q Consensus       192 Ey~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~--------------------------------------  232 (837)
                      ||++| .+.+...    ..++..+...++.+++..|..||+.                                      
T Consensus       107 e~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  182 (320)
T 3r70_A          107 KYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLT  182 (320)
T ss_dssp             ECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             eecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccc
Confidence            99987 3332211    2356666666677777777666632                                      


Q ss_pred             -------------------------CeeeccCCCCCeeeeccCCCCeEEEEecccccc
Q 003239          233 -------------------------GIIHCDLKPENILLCTSVKPAEIKIIDFGSACT  265 (837)
Q Consensus       233 -------------------------gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~  265 (837)
                                               .++|+|++|.|||++   ....+.|+||+.+..
T Consensus       183 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~---~~~~~~~iD~~~~~~  237 (320)
T 3r70_A          183 DEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFR---NNRLFGVIDFGDFNV  237 (320)
T ss_dssp             HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEE---TTEEEEECCCTTCEE
T ss_pred             ccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEE---CCceEEEECCccccc
Confidence                                     359999999999996   344569999999853


No 262
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.26  E-value=1.8e-05  Score=82.43  Aligned_cols=132  Identities=13%  Similarity=0.096  Sum_probs=88.6

Q ss_pred             EeccCCce-eEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEEEEEecc
Q 003239          116 LLGHGTFG-QVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFELL  194 (837)
Q Consensus       116 ~LG~G~fG-~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~LVmEy~  194 (837)
                      .+..|..+ .||+......+..+++|+-...  ....+.+|..+|+.|..      +--+.+++.++.+.+..++|||++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~------~vPVP~v~~~~~~~~~~~lvme~l  102 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTA------FMPLPTIKHFIRTPDDAWLLTTAI  102 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTT------TSCCCCEEEEEEETTEEEEEEECC
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhcc------CCCcCeEEEEEEECCeEEEEEEee
Confidence            34445444 6999877777788999987643  34567889999999953      223778888888889999999999


Q ss_pred             ch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhc------------------------------------------
Q 003239          195 DS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKD------------------------------------------  231 (837)
Q Consensus       195 ~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs------------------------------------------  231 (837)
                      +| .+.+......      .....+..++...|..||.                                          
T Consensus       103 ~G~~~~~~~~~~~------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (272)
T 4gkh_A          103 PGKTAFQVLEEYP------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPV  176 (272)
T ss_dssp             CSEEHHHHHHHCG------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCH
T ss_pred             CCccccccccCCH------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHH
Confidence            86 4433322110      1112233333333333332                                          


Q ss_pred             ----------------CCeeeccCCCCCeeeeccCCCCeEEEEeccccc
Q 003239          232 ----------------AGIIHCDLKPENILLCTSVKPAEIKIIDFGSAC  264 (837)
Q Consensus       232 ----------------~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~  264 (837)
                                      ..+||+|+++.|||++   ..+.+-|+||+.+.
T Consensus       177 ~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~---~~~~~~viDwe~a~  222 (272)
T 4gkh_A          177 EQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFD---EGKLIGCIDVGRVG  222 (272)
T ss_dssp             HHHHHHHHTTCCCCCCEEEECSCCCTTSEEEE---TTEEEEECCCTTCE
T ss_pred             HHHHHHHHhcccccCCcEEEcCCCCCCeEEEE---CCeEEEEEECcccc
Confidence                            1379999999999995   44556799999874


No 263
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.08  E-value=1.4e-05  Score=88.76  Aligned_cols=77  Identities=18%  Similarity=0.193  Sum_probs=50.8

Q ss_pred             EEEeccCCceeEEEeeccCCCeEEEEEEEeCCh--------hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP--------AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       114 ~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~--------~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      .+.||.|..+.||++....+++.|+||......        ...+....|.++|+.+...    ....+.+++.+  +.+
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~----~~~~vP~~~~~--d~~  108 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEH----VPHLVPRVFYS--DTE  108 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTT----CGGGSCCEEEE--ETT
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhh----CCCCcCeEEEE--cCC
Confidence            567999999999999776667889999865321        1234567899999988642    11234455543  345


Q ss_pred             eEEEEEeccch
Q 003239          186 HLCICFELLDS  196 (837)
Q Consensus       186 ~l~LVmEy~~g  196 (837)
                      ..++|||++.+
T Consensus       109 ~~~lvmE~l~g  119 (397)
T 2olc_A          109 MAVTVMEDLSH  119 (397)
T ss_dssp             TTEEEECCCTT
T ss_pred             ccEEEEEeCCC
Confidence            57899999975


No 264
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.04  E-value=1.5e-05  Score=88.01  Aligned_cols=74  Identities=4%  Similarity=-0.162  Sum_probs=55.0

Q ss_pred             EEEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeec-ceEEEE
Q 003239          112 IVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQ-RHLCIC  190 (837)
Q Consensus       112 ~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~-~~l~LV  190 (837)
                      ..++.|+.|....||++..  +++.+++|+.....    .+..|..+|+.|...     .-.+.+++.+.... +..++|
T Consensus        44 ~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~~----~~~~E~~~l~~L~~~-----gvpvP~vl~~~~~~~g~~~lv  112 (362)
T 3ovc_A           44 SDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCAD----GFYKDRYVYRHFASA-----ALPIPEVLDIGEFSESLTYCI  112 (362)
T ss_dssp             EEEEEEEECSSEEEEEEEE--TTEEEEEEEESCCH----HHHHHHHHHHHHCCS-----SSCCCCEEEEEESSSSCEEEE
T ss_pred             ceEEECCCCCcceEEEEEE--CCcEEEEEeCCchh----hHHHHHHHHHHHHhc-----CCCCceEEEeccCCCCCeEEE
Confidence            3467789999999999863  57889999886542    577899999998642     12356666666654 678999


Q ss_pred             Eeccch
Q 003239          191 FELLDS  196 (837)
Q Consensus       191 mEy~~g  196 (837)
                      ||+++|
T Consensus       113 ~e~l~G  118 (362)
T 3ovc_A          113 SRRAQG  118 (362)
T ss_dssp             EECCCS
T ss_pred             EEecCC
Confidence            999975


No 265
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.90  E-value=5.6e-05  Score=81.00  Aligned_cols=76  Identities=18%  Similarity=0.196  Sum_probs=44.0

Q ss_pred             EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEe-E--EEeecceEEEE
Q 003239          114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIY-E--YFVCQRHLCIC  190 (837)
Q Consensus       114 ~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~-d--~f~~~~~l~LV  190 (837)
                      ++.|+.|..+.||++...  +..+++|+.....   .....|+.+++.|...-  ...|.++... +  +....+..++|
T Consensus        37 ~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~~---~~~~~e~~~l~~L~~~g--~~vp~~~~~~~g~~~~~~~~~~~~l  109 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD--SGAVCLKRIHRPE---KKALFSIFAQDYLAKKG--MNVPGILPNKKGSLYSKHGSFLFVV  109 (346)
T ss_dssp             EEECC----CEEEEEEET--TEEEEEEEECSCH---HHHHHHHHHHHHHHHHT--CSSCCBCCCTTSCSCEEETTEEEEE
T ss_pred             eeeccccccCcEEEEEeC--CCCEEEEecCCCH---HHHHHHHHHHHHHHHcC--CCCCceeecCCCCEEEEECCEEEEE
Confidence            345666778999998642  3458999998643   34456778888876430  1223333210 0  12345678999


Q ss_pred             Eeccch
Q 003239          191 FELLDS  196 (837)
Q Consensus       191 mEy~~g  196 (837)
                      ||+++|
T Consensus       110 ~~~i~G  115 (346)
T 2q83_A          110 YDWIEG  115 (346)
T ss_dssp             EECCCC
T ss_pred             EEeecC
Confidence            999986


No 266
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.89  E-value=4.6e-05  Score=81.54  Aligned_cols=77  Identities=14%  Similarity=0.047  Sum_probs=56.2

Q ss_pred             eEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCC-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEEE
Q 003239          111 YIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQ-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCI  189 (837)
Q Consensus       111 Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~L  189 (837)
                      ..-.+.|+.|.++.||++.. .+|+.++||+.... ......+..|+++|+.|.+.    ....+++++.+.    ..++
T Consensus        17 ~~~~~~l~gG~~n~vy~v~~-~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~----~~v~vP~v~~~~----~~~l   87 (288)
T 3d1u_A           17 VAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRS----FGSPVPQVAGWD----DRTL   87 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCS----TTCCSCCEEEEE----TTEE
T ss_pred             ccceeeeCCcchhheEEEEe-CCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhc----CCCCcCeEEEec----CcEE
Confidence            34567899999999999965 46788999996532 22235678999999999642    123577777653    4689


Q ss_pred             EEeccch
Q 003239          190 CFELLDS  196 (837)
Q Consensus       190 VmEy~~g  196 (837)
                      |||+++|
T Consensus        88 vme~l~g   94 (288)
T 3d1u_A           88 AMEWVDE   94 (288)
T ss_dssp             EEECCCC
T ss_pred             EEEeccc
Confidence            9999975


No 267
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.86  E-value=2.3e-05  Score=85.30  Aligned_cols=81  Identities=4%  Similarity=0.001  Sum_probs=54.9

Q ss_pred             EEEEEe-ccCCceeEEEeecc--C----CCeEEEEEEEeCCh---h-hHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE
Q 003239          112 IVKDLL-GHGTFGQVAKCWDA--E----MNSFVAVKIIKNQP---A-YYQQALVEVSILTTLNKKYDREDKHHIVRIYEY  180 (837)
Q Consensus       112 ~i~~~L-G~G~fG~Vyka~~~--~----tg~~VAIKiik~~~---~-~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~  180 (837)
                      ...+.| +.|....+|++...  .    +++.+++|+.....   . ....+.+|+.+|+.|...    ..-.+.+++.+
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~----~~vpvP~v~~~   98 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGEL----TDVPVPRVRWI   98 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHH----CCSCCCCEEEE
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhc----CCCCCCcEEEE
Confidence            345678 88999999988543  1    25678889865432   0 124567899999999652    11346777777


Q ss_pred             Eeec---ceEEEEEeccch
Q 003239          181 FVCQ---RHLCICFELLDS  196 (837)
Q Consensus       181 f~~~---~~l~LVmEy~~g  196 (837)
                      ....   +..++|||+++|
T Consensus        99 ~~~~~~~g~~~~v~e~l~G  117 (357)
T 3ats_A           99 ETTGDVLGTPFFLMDYVEG  117 (357)
T ss_dssp             ECSSTTTSSCEEEEECCCC
T ss_pred             ccCCCccCCceEEEEecCC
Confidence            6655   357899999976


No 268
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.39  E-value=0.00033  Score=74.61  Aligned_cols=69  Identities=9%  Similarity=-0.057  Sum_probs=43.8

Q ss_pred             EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEEEEEec
Q 003239          114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFEL  193 (837)
Q Consensus       114 ~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~LVmEy  193 (837)
                      ++.|+.|....+|++      +.+++|+............+|+.+++.+...    +-  ..+++.++  .+.-++|+||
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~----g~--~P~~~~~~--~~~~~~v~e~   88 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKA----GV--SPEVLHVD--PATGVMVTRY   88 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHT----TS--SCCEEEEC--TTTCCEEEEC
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHc----CC--CCceEEEE--CCCCEEEEee
Confidence            567888999999998      3488898875322222335689999888653    11  13444433  3345789999


Q ss_pred             c-ch
Q 003239          194 L-DS  196 (837)
Q Consensus       194 ~-~g  196 (837)
                      + +|
T Consensus        89 i~~g   92 (301)
T 3dxq_A           89 IAGA   92 (301)
T ss_dssp             CTTC
T ss_pred             cCCC
Confidence            9 64


No 269
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.37  E-value=0.0006  Score=76.29  Aligned_cols=75  Identities=16%  Similarity=0.210  Sum_probs=45.8

Q ss_pred             EEEeccCCceeEEEeeccCCCeEEEEEEEeC-------C-hhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKN-------Q-PAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       114 ~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~-------~-~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++.||.|..+.||++..  +++.++||....       . .........|.+++..+...    ....+.+++.+.  .+
T Consensus        39 i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~----~~~~vP~v~~~~--~~  110 (420)
T 2pyw_A           39 IKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNL----SPDHVPEVYHFD--RT  110 (420)
T ss_dssp             EEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHH----SGGGSCCEEEEE--TT
T ss_pred             EEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhh----CCCCCCeEEEEC--CC
Confidence            46789999999999954  466799994321       1 10012233455555444321    123566676664  56


Q ss_pred             eEEEEEecc-ch
Q 003239          186 HLCICFELL-DS  196 (837)
Q Consensus       186 ~l~LVmEy~-~g  196 (837)
                      ..++|||++ ++
T Consensus       111 ~~~lv~e~l~~g  122 (420)
T 2pyw_A          111 MALIGMRYLEPP  122 (420)
T ss_dssp             TTEEEECCCCTT
T ss_pred             ccEEEEeecCCc
Confidence            789999999 75


No 270
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.35  E-value=0.0013  Score=71.18  Aligned_cols=75  Identities=24%  Similarity=0.216  Sum_probs=59.0

Q ss_pred             EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEEEEEec
Q 003239          114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFEL  193 (837)
Q Consensus       114 ~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~LVmEy  193 (837)
                      .+.|+.|....+|++..  ++..+++|+....  ....+..|...|+.|...    ....+.+++.+....+..++|||+
T Consensus        41 ~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~----~~v~VP~vl~~~~~~g~~~lvme~  112 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND--EVQTVFVKINERS--YRSMFRAEADQLALLAKT----NSINVPLVYGIGNSQGHSFLLLEA  112 (312)
T ss_dssp             EEEECCSSSSEEEEEES--SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHT----TSSBCCCEEEEEECSSEEEEEEEC
T ss_pred             eEEeCCccceeeeEEEE--CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhh----CCCCcceEEEEeecCCceEEEEEe
Confidence            56789999999999965  4567889987643  356678899999999652    234688888888878889999999


Q ss_pred             cch
Q 003239          194 LDS  196 (837)
Q Consensus       194 ~~g  196 (837)
                      ++|
T Consensus       113 l~G  115 (312)
T 3jr1_A          113 LNK  115 (312)
T ss_dssp             CCC
T ss_pred             ccC
Confidence            975


No 271
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.05  E-value=0.0044  Score=66.23  Aligned_cols=74  Identities=16%  Similarity=0.088  Sum_probs=47.8

Q ss_pred             EeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE-----EeecceEEEE
Q 003239          116 LLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY-----FVCQRHLCIC  190 (837)
Q Consensus       116 ~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~-----f~~~~~l~LV  190 (837)
                      .|+ |....||++.. .+++.+++|+..........+..|..+++.|...    + -.+++++..     ....+..++|
T Consensus        33 ~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~----g-~~vp~~~~~~g~~~~~~~g~~~~l  105 (328)
T 1zyl_A           33 PLN-SYENRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVND----E-VPVAAPVAFNGQTLLNHQGFYFAV  105 (328)
T ss_dssp             EEC-CSSSEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHT----T-CSBCCCCCBTTBSCEEETTEEEEE
T ss_pred             eec-CcccceEEEEc-CCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHc----C-CeecceeecCCcEEEEECCEEEEE
Confidence            455 77889998854 3456789999874322345677799999998653    1 113333322     2234567899


Q ss_pred             Eeccch
Q 003239          191 FELLDS  196 (837)
Q Consensus       191 mEy~~g  196 (837)
                      ||+++|
T Consensus       106 ~~~i~G  111 (328)
T 1zyl_A          106 FPSVGG  111 (328)
T ss_dssp             EECCCC
T ss_pred             EEecCC
Confidence            999875


No 272
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.90  E-value=0.0028  Score=70.52  Aligned_cols=140  Identities=16%  Similarity=0.169  Sum_probs=79.0

Q ss_pred             EEeccCCceeEEEeeccC-------CCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          115 DLLGHGTFGQVAKCWDAE-------MNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       115 ~~LG~G~fG~Vyka~~~~-------tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      +.|..|-...+|++....       +++.|++|+............+|..+++.|...    +  -..+++.++..    
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~----g--v~P~ll~~~~~----  125 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAER----S--LGPQLYGVFPE----  125 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHT----T--SSCCEEEEETT----
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhc----C--CCCeEEEEcCC----
Confidence            456667777888886532       356789998644322345667899999999753    1  13556666543    


Q ss_pred             EEEEeccch-hH--------------HHHHHhhcc------CCC--CHHHHHHHHHhHHH-------------------H
Q 003239          188 CICFELLDS-NL--------------YELIKINHF------RGL--SLSIVQLFSKQILR-------------------G  225 (837)
Q Consensus       188 ~LVmEy~~g-sL--------------~d~l~~~~~------~~L--~e~~i~~I~~QIl~-------------------a  225 (837)
                      .+||||++| .|              .+.+..-..      +..  -+.++.+++.++..                   .
T Consensus       126 g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~  205 (379)
T 3feg_A          126 GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDE  205 (379)
T ss_dssp             EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHH
T ss_pred             ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHH
Confidence            289999875 11              111111110      111  13556666554422                   1


Q ss_pred             Hhhhh--------cCCeeeccCCCCCeeeecc-CCCCeEEEEeccccc
Q 003239          226 LSLLK--------DAGIIHCDLKPENILLCTS-VKPAEIKIIDFGSAC  264 (837)
Q Consensus       226 L~yLH--------s~gIVHrDLKPeNILl~~~-~~~~~IKL~DFGlA~  264 (837)
                      +..|.        ...++|+|+.+.|||++.+ +..+.+.|+||..+.
T Consensus       206 ~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          206 MGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             HHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence            22222        2369999999999999732 123689999999874


No 273
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.88  E-value=0.0047  Score=65.12  Aligned_cols=78  Identities=14%  Similarity=0.055  Sum_probs=53.7

Q ss_pred             CceEEEEEeccCCceeEEEeeccCCCeEEEEEEEeCCh-hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceE
Q 003239          109 RRYIVKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQP-AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHL  187 (837)
Q Consensus       109 ~~Y~i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~-~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l  187 (837)
                      .+..-++.+|.|..+.||++.. .+|+.|++|+..... .....+..|...|+.|...    .---+.+++.+    +.-
T Consensus        15 ~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~----~~vpvP~v~~~----~~~   85 (288)
T 3f7w_A           15 REVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRS----FGSPVPQVAGW----DDR   85 (288)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCS----TTCCSCCEEEE----ETT
T ss_pred             CCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhh----CCCCcceEEec----cCc
Confidence            4556678899999999999964 568889999876432 2234567899999999642    11124445543    234


Q ss_pred             EEEEeccc
Q 003239          188 CICFELLD  195 (837)
Q Consensus       188 ~LVmEy~~  195 (837)
                      ++|||++.
T Consensus        86 ~lv~e~l~   93 (288)
T 3f7w_A           86 TLAMEWVD   93 (288)
T ss_dssp             EEEEECCC
T ss_pred             eEEEEeec
Confidence            78999975


No 274
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.73  E-value=0.0022  Score=70.18  Aligned_cols=73  Identities=15%  Similarity=0.076  Sum_probs=43.8

Q ss_pred             EEEeccCCceeEEEeeccC--------CCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecc
Q 003239          114 KDLLGHGTFGQVAKCWDAE--------MNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQR  185 (837)
Q Consensus       114 ~~~LG~G~fG~Vyka~~~~--------tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~  185 (837)
                      ++.|+.|....+|++....        .++.+++|+.............|..+++.|...    +  -+.+++..+  . 
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~----g--~~P~~~~~~--~-  108 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKY----K--IAPQLLNTF--N-  108 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHT----T--SSCCEEEEE--T-
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhc----C--CCCceEEec--C-
Confidence            4567788888999986543        136788998765432222346799999998653    1  134555544  2 


Q ss_pred             eEEEEEeccch
Q 003239          186 HLCICFELLDS  196 (837)
Q Consensus       186 ~l~LVmEy~~g  196 (837)
                       -++|||+++|
T Consensus       109 -~~~v~e~i~G  118 (369)
T 3c5i_A          109 -GGRIEEWLYG  118 (369)
T ss_dssp             -TEEEEECCCS
T ss_pred             -CcEEEEEecC
Confidence             2689999875


No 275
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.66  E-value=0.0033  Score=67.58  Aligned_cols=35  Identities=29%  Similarity=0.429  Sum_probs=26.9

Q ss_pred             cCCeeeccCCCCCeeeeccCC-CCeEEEEecccccc
Q 003239          231 DAGIIHCDLKPENILLCTSVK-PAEIKIIDFGSACT  265 (837)
Q Consensus       231 s~gIVHrDLKPeNILl~~~~~-~~~IKL~DFGlA~~  265 (837)
                      ...+||+|+.+.|||++.+.. ...+.|+||+.+..
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence            457999999999999963111 25789999998853


No 276
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.60  E-value=0.01  Score=63.13  Aligned_cols=79  Identities=5%  Similarity=-0.073  Sum_probs=45.3

Q ss_pred             EEEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEe-E--EEeecceEEE
Q 003239          113 VKDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIY-E--YFVCQRHLCI  189 (837)
Q Consensus       113 i~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~-d--~f~~~~~l~L  189 (837)
                      -++.|+.|....||++... ++ .+++|+.... ...+.+..|+.+++.|...  ....|.++... +  +....+..++
T Consensus        26 ~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~--g~~vP~~~~~~~g~~~~~~~g~~~~  100 (322)
T 2ppq_A           26 SYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAK--GLSCPLPLPRKDGELLGELSGRPAA  100 (322)
T ss_dssp             EEEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHT--TCCCCCBCCBTTCCSCEEETTEEEE
T ss_pred             EeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHC--CCCCCcccCCCCCCEEEEECCEEEE
Confidence            3567888888999998643 33 5789998752 1123456789999988653  01123333211 0  1123466789


Q ss_pred             EEeccch
Q 003239          190 CFELLDS  196 (837)
Q Consensus       190 VmEy~~g  196 (837)
                      ||++++|
T Consensus       101 l~~~l~G  107 (322)
T 2ppq_A          101 LISFLEG  107 (322)
T ss_dssp             EEECCCC
T ss_pred             EEEeCCC
Confidence            9999875


No 277
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.53  E-value=0.014  Score=66.41  Aligned_cols=73  Identities=16%  Similarity=0.168  Sum_probs=46.7

Q ss_pred             EEEeccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecceEEEEEec
Q 003239          114 KDLLGHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRHLCICFEL  193 (837)
Q Consensus       114 ~~~LG~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~l~LVmEy  193 (837)
                      ++.|+.|-...+|++.....++.+++|+........-...+|..+++.|...      .-..+++.++.  +  .+||||
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~------gl~P~ll~~~~--~--G~v~e~  182 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNK------NIAKKIYVFFT--N--GRIEEF  182 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTS------SSBCCEEEEET--T--EEEEEC
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhc------CCCCCEEEEeC--C--eEEEEe
Confidence            5678889999999997654457899998854321111225799999999642      12356777663  2  259999


Q ss_pred             cch
Q 003239          194 LDS  196 (837)
Q Consensus       194 ~~g  196 (837)
                      ++|
T Consensus       183 I~G  185 (458)
T 2qg7_A          183 MDG  185 (458)
T ss_dssp             CCS
T ss_pred             eCC
Confidence            875


No 278
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.52  E-value=0.013  Score=66.02  Aligned_cols=72  Identities=19%  Similarity=0.176  Sum_probs=48.7

Q ss_pred             EEEeccCCceeEEEeeccC-------CCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecce
Q 003239          114 KDLLGHGTFGQVAKCWDAE-------MNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH  186 (837)
Q Consensus       114 ~~~LG~G~fG~Vyka~~~~-------tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~  186 (837)
                      ++.|+.|-...||++....       .++.|++|+..... ....+.+|..+++.|...      .-..++++.+..   
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~-~~~~li~E~~~l~~L~~~------g~~P~l~~~~~~---  147 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-TESHLVAESVIFTLLSER------HLGPKLYGIFSG---  147 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-CHHHHHHHHHHHHHHHHT------TSSSCEEEEETT---
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC-cHHHHHHHHHHHHHHHhC------CCCCcEEEEeCC---
Confidence            4678888889999997542       25789999985421 124556899999999653      113556665542   


Q ss_pred             EEEEEeccch
Q 003239          187 LCICFELLDS  196 (837)
Q Consensus       187 l~LVmEy~~g  196 (837)
                       .+||||++|
T Consensus       148 -g~v~e~l~G  156 (429)
T 1nw1_A          148 -GRLEEYIPS  156 (429)
T ss_dssp             -EEEECCCCE
T ss_pred             -CEEEEEeCC
Confidence             289999875


No 279
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.19  E-value=0.027  Score=61.18  Aligned_cols=68  Identities=12%  Similarity=0.085  Sum_probs=43.5

Q ss_pred             ccCCceeEEEeeccCCCeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEE------EeecceEEEEE
Q 003239          118 GHGTFGQVAKCWDAEMNSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEY------FVCQRHLCICF  191 (837)
Q Consensus       118 G~G~fG~Vyka~~~~tg~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~------f~~~~~l~LVm  191 (837)
                      |.|....||++... ++ .+++|+......     ..|+.+++.|...    +-+.+++++..      ....+..++||
T Consensus        32 G~g~~N~vy~v~~~-~g-~~vLK~~~~~~~-----~~E~~~l~~L~~~----g~~~vp~pi~~~~G~~~~~~~g~~~~l~  100 (339)
T 3i1a_A           32 GADTNAFAYQADSE-SK-SYFIKLKYGYHD-----EINLSIIRLLHDS----GIKEIIFPIHTLEAKLFQQLKHFKIIAY  100 (339)
T ss_dssp             TSCSSCEEEEEECS-SC-EEEEEEEECSSC-----CHHHHHHHHHHHT----TCCSSCCCCCCTTSCSSEECSSEEEEEE
T ss_pred             cCccccceEEEEeC-CC-CEEEEEecCccc-----hHHHHHHHHHHhc----CCcccccceecCCCCEEEEECCEEEEEE
Confidence            34446899998643 34 789998875431     4688888888653    22224444322      23357789999


Q ss_pred             eccch
Q 003239          192 ELLDS  196 (837)
Q Consensus       192 Ey~~g  196 (837)
                      ++++|
T Consensus       101 ~~i~G  105 (339)
T 3i1a_A          101 PFIHA  105 (339)
T ss_dssp             ECCCC
T ss_pred             eccCC
Confidence            99875


No 280
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.84  E-value=0.044  Score=56.36  Aligned_cols=97  Identities=10%  Similarity=0.018  Sum_probs=61.6

Q ss_pred             hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhh-cCCeeeccCCCCCeeeeccCCCCeEEEEecccccccCCcceeecc
Q 003239          197 NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLK-DAGIIHCDLKPENILLCTSVKPAEIKIIDFGSACTEDRTVYSYIQ  275 (837)
Q Consensus       197 sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLH-s~gIVHrDLKPeNILl~~~~~~~~IKL~DFGlA~~~~~~~~~~~G  275 (837)
                      +|.++++... .+++|+++|.++.|.+.+|.-+- .+.-..+=+.|..|+|.   .+|.|.+.+ ..+         ...
T Consensus        34 SL~eIL~~~~-~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~---~dG~V~f~~-~~s---------~~~   99 (229)
T 2yle_A           34 SLEEILRLYN-QPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVW---RDGAVTLAP-AAD---------DAG   99 (229)
T ss_dssp             EHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEE---TTSCEEECC-C--------------
T ss_pred             cHHHHHHHcC-CCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEe---cCCceeccc-ccc---------ccc
Confidence            7888887764 78999999999999999988872 11112333456777775   556666553 111         012


Q ss_pred             CccccCchhhcCCCCCccchHHHHHHHHHHHHh
Q 003239          276 SRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFL  308 (837)
Q Consensus       276 T~~Y~APEvl~~~~yt~ksDIWSLG~ILyELlt  308 (837)
                      ...+.|||... ...+.+.=|+|||+++|..+-
T Consensus       100 ~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALD  131 (229)
T 2yle_A          100 EPPPVAGKLGY-SQCMETEVIESLGIIIYKALD  131 (229)
T ss_dssp             -------CCSS-SSSCHHHHHHHHHHHHHHHHT
T ss_pred             ccCCCChhhcc-ccchHHHHHHHHHHHHHHHhh
Confidence            33467888863 355678899999999999885


No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.51  E-value=0.043  Score=61.40  Aligned_cols=32  Identities=28%  Similarity=0.395  Sum_probs=25.5

Q ss_pred             CeeeccCCCCCeeeecc---CCCCeEEEEeccccc
Q 003239          233 GIIHCDLKPENILLCTS---VKPAEIKIIDFGSAC  264 (837)
Q Consensus       233 gIVHrDLKPeNILl~~~---~~~~~IKL~DFGlA~  264 (837)
                      .++|+|+.+.|||++.+   ...+.+.|+||..|.
T Consensus       245 v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~  279 (401)
T 3f2s_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred             eEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence            58999999999999632   112689999998874


No 282
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.74  E-value=0.032  Score=62.90  Aligned_cols=73  Identities=14%  Similarity=0.081  Sum_probs=46.8

Q ss_pred             EEEeccCCceeEEEeeccCC-------CeEEEEEEEeCChhhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEeecce
Q 003239          114 KDLLGHGTFGQVAKCWDAEM-------NSFVAVKIIKNQPAYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFVCQRH  186 (837)
Q Consensus       114 ~~~LG~G~fG~Vyka~~~~t-------g~~VAIKiik~~~~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~~~~~  186 (837)
                      ++.|..|-...+|++.....       ++.|++|+........-...+|..+++.|...      .-..++++.+.    
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~------gi~P~l~~~~~----  144 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNI------NIAPNIIADFP----  144 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHT------TSSCCEEEEET----
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhc------CCCCCEEEEcC----
Confidence            45667788888999865421       57799998754322222345799999998653      12345554332    


Q ss_pred             EEEEEeccch
Q 003239          187 LCICFELLDS  196 (837)
Q Consensus       187 l~LVmEy~~g  196 (837)
                      -++||||++|
T Consensus       145 ~~~I~efI~G  154 (424)
T 3mes_A          145 EGRIEEFIDG  154 (424)
T ss_dssp             TEEEEECCCS
T ss_pred             CCEEEEEeCC
Confidence            2688999875


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.89  E-value=0.34  Score=53.68  Aligned_cols=32  Identities=28%  Similarity=0.395  Sum_probs=25.9

Q ss_pred             CeeeccCCCCCeeeecc---CCCCeEEEEeccccc
Q 003239          233 GIIHCDLKPENILLCTS---VKPAEIKIIDFGSAC  264 (837)
Q Consensus       233 gIVHrDLKPeNILl~~~---~~~~~IKL~DFGlA~  264 (837)
                      .++|+|+.+.|||+..+   ++...++|+||..|.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            36899999999999532   356789999999884


No 284
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=48.94  E-value=37  Score=34.41  Aligned_cols=113  Identities=12%  Similarity=0.082  Sum_probs=74.5

Q ss_pred             CCCceeEEeEEEeecceEEEEEeccc-h-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCCeeeccCCCCCeeee
Q 003239          170 DKHHIVRIYEYFVCQRHLCICFELLD-S-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAGIIHCDLKPENILLC  247 (837)
Q Consensus       170 ~HpnIVkl~d~f~~~~~l~LVmEy~~-g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~gIVHrDLKPeNILl~  247 (837)
                      .+|+++.. .+-..++.+.|.++.-. . ++.. +     +.++....++++.+|+....+++.  =+|--|+|+||+++
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-i-----k~~~~~eKlr~l~ni~~l~~~~~~--r~tf~L~P~NL~f~  113 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-I-----KSFTKNEKLRYLLNIKNLEEVNRT--RYTFVLAPDELFFT  113 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-G-----GGSCHHHHHHHHHHGGGGGGGGGS--SEECCCSGGGEEEC
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-H-----HhcCHHHHHHHHHHHHHHHHHhcC--ceEEEEecceEEEc
Confidence            57888866 56666777777777654 2 3222 2     237888899999999987755543  47778999999995


Q ss_pred             ccCCCCeEEEEecccccccCCcceeeccCccccCchhhcCCCCCccchHHHHHHHHHHHHhCCCCC
Q 003239          248 TSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLF  313 (837)
Q Consensus       248 ~~~~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIWSLG~ILyELltG~~PF  313 (837)
                         .++.+++.-.|+-..              ++|.     .++...=.-.+=|++..++.++..|
T Consensus       114 ---~~~~p~i~~RGik~~--------------l~P~-----~~~ee~fL~qyKAliiall~~K~~F  157 (215)
T 4ann_A          114 ---RDGLPIAKTRGLQNV--------------VDPL-----PVSEAEFLTRYKALVICAFNEKQSF  157 (215)
T ss_dssp             ---TTSCEEESCCEETTT--------------BSCC-----CCCHHHHHHHHHHHHHHHHCTTCCH
T ss_pred             ---CCCCEEEEEccCccC--------------CCCC-----CCCHHHHHHHHHHHHHHHHcCCCCH
Confidence               777888877665321              1221     1111111335678888899988777


No 285
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=41.76  E-value=68  Score=32.57  Aligned_cols=111  Identities=13%  Similarity=0.088  Sum_probs=73.4

Q ss_pred             CCCceeEEeEEEeecceEEEEEeccc-h-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHh-hhhcCCeeeccCCCCCeee
Q 003239          170 DKHHIVRIYEYFVCQRHLCICFELLD-S-NLYELIKINHFRGLSLSIVQLFSKQILRGLS-LLKDAGIIHCDLKPENILL  246 (837)
Q Consensus       170 ~HpnIVkl~d~f~~~~~l~LVmEy~~-g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~-yLHs~gIVHrDLKPeNILl  246 (837)
                      .||++  -..+-..++.+.|.++.-. . ++. .++     .++....++++.+|+.... +++  .-+|--|+|+||++
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~-~i~-----~~~~~eKlrll~nl~~L~~~~~~--~r~tf~l~P~NL~f  117 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFA-AIR-----KTTLLSRIRAAIHLVSKVKHHSA--RRLIFIVCPENLMF  117 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHH-HHH-----TSCHHHHHHHHHHHHHHHSSCCS--SSEECCCCGGGEEE
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHH-HHH-----hcCHHHHHHHHHHHHHHHHHhhh--CceeEEEeCceEEE
Confidence            46777  4444467778888777764 2 333 332     3788889999999988766 554  45778899999999


Q ss_pred             eccCCCCeEEEEecccccccCCcceeeccCccccCchhhcCCCCCccchHH-HHHHHHHHHHhCCCCC
Q 003239          247 CTSVKPAEIKIIDFGSACTEDRTVYSYIQSRYYRSPEVLLGYQYTTAIDMW-SFGCIVAELFLGLPLF  313 (837)
Q Consensus       247 ~~~~~~~~IKL~DFGlA~~~~~~~~~~~GT~~Y~APEvl~~~~yt~ksDIW-SLG~ILyELltG~~PF  313 (837)
                      +   .++.++|.-.|+-..              ++|.-+     + ..|.| .+=|++..++.++.-|
T Consensus       118 ~---~~~~p~i~hRGi~~~--------------lpP~e~-----~-ee~fl~qyKali~all~~K~~F  162 (219)
T 4ano_A          118 N---RALEPFFLHVGVKES--------------LPPDEW-----D-DERLLREVKATVLALTEGEYRF  162 (219)
T ss_dssp             C---TTCCEEESCCEETTT--------------BSSCSC-----C-HHHHHHHHHHHHHHHTTCSSCH
T ss_pred             e---CCCcEEEEEcCCccc--------------CCCCCC-----C-HHHHHHHHHHHHHHHHcCCCCH
Confidence            5   678888887776321              222211     1 12333 5668888888887766


No 286
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=31.78  E-value=5.1  Score=45.30  Aligned_cols=59  Identities=7%  Similarity=0.010  Sum_probs=16.2

Q ss_pred             EEEeccCCceeEEEeeccCCCeEEEE------EEEeCCh---hhHHHHHHHHHHHHHhhcccCCCCCCceeEEeEEEe
Q 003239          114 KDLLGHGTFGQVAKCWDAEMNSFVAV------KIIKNQP---AYYQQALVEVSILTTLNKKYDREDKHHIVRIYEYFV  182 (837)
Q Consensus       114 ~~~LG~G~fG~Vyka~~~~tg~~VAI------Kiik~~~---~~~~~~~~Ei~iL~~L~~~~~~~~HpnIVkl~d~f~  182 (837)
                      .+.||   ||.||++....+...|||      |.++...   .....+.+|..+++.+       .|+|+++.+.+-.
T Consensus       147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~-------~H~niv~~h~f~~  214 (463)
T 3cxl_A          147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENE-------QIPKYEKIHNFKV  214 (463)
T ss_dssp             TTTSS---BCCC---------CCBGGGC------------------------------------------CBCCCEEE
T ss_pred             cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccc-------cccccCCCcceEE
Confidence            34565   999999987665567888      6665322   2223456677776665       6788888877654


No 287
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=25.49  E-value=15  Score=48.16  Aligned_cols=11  Identities=9%  Similarity=0.021  Sum_probs=5.2

Q ss_pred             CCHHHHHHHHH
Q 003239          210 LSLSIVQLFSK  220 (837)
Q Consensus       210 L~e~~i~~I~~  220 (837)
                      ++.+....++.
T Consensus      1040 l~~~~~~~~~~ 1050 (1752)
T 3h0g_A         1040 LNKVAFEWIMG 1050 (1752)
T ss_dssp             CCHHHHHHHHH
T ss_pred             cCHHHHHHHHH
Confidence            55555444443


No 288
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=23.16  E-value=2.9e+02  Score=29.84  Aligned_cols=78  Identities=19%  Similarity=0.184  Sum_probs=40.5

Q ss_pred             eEEEEEeccch-hHHHHHHhhccCCCCHHHHHHHHHhHHHHHhhhhcCC-----eeeccCCCCCeeeeccCCCCeEEEEe
Q 003239          186 HLCICFELLDS-NLYELIKINHFRGLSLSIVQLFSKQILRGLSLLKDAG-----IIHCDLKPENILLCTSVKPAEIKIID  259 (837)
Q Consensus       186 ~l~LVmEy~~g-sL~d~l~~~~~~~L~e~~i~~I~~QIl~aL~yLHs~g-----IVHrDLKPeNILl~~~~~~~~IKL~D  259 (837)
                      ...++|||..| .|.+.-...-...+.++..+.+.+  +-+++.+..+.     +.+.--.++|||+..  ++..+.++|
T Consensus       156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~LG~--Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~--~n~~~~~ID  231 (342)
T 1cja_A          156 ANILLMELVRGITLNKLTTTSAPEVLTKSTMQQLGS--LMALDVIVNNSDRLPIAWTNEGNLDNIMLSE--RGATVVPID  231 (342)
T ss_dssp             SEEEEEECCCEEESTTCCSSSHHHHSCHHHHHHHHH--HHHHHHHHTCCSSSCSSSCSCCCGGGEEEES--BTTCEEECS
T ss_pred             cceehhhhcCCCccccchhhhhhhhcCHHHHHhhch--hheehhhhcCCccCcccccCCCChhheEEeC--CCCeEEEEc
Confidence            46699999986 333211000000133333322111  23444444332     222235899999974  345799999


Q ss_pred             cccccccC
Q 003239          260 FGSACTED  267 (837)
Q Consensus       260 FGlA~~~~  267 (837)
                      -+.++..+
T Consensus       232 hn~af~~~  239 (342)
T 1cja_A          232 SKIIPLDA  239 (342)
T ss_dssp             CCCCCCCS
T ss_pred             CCccccCC
Confidence            99986544


Done!