Query 003242
Match_columns 837
No_of_seqs 405 out of 1812
Neff 7.8
Searched_HMMs 13730
Date Mon Mar 25 18:24:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003242.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/003242hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ip9a_ d.15.2.2 (A:) Bud emer 98.2 2.7E-06 2E-10 71.0 8.6 59 28-90 20-78 (85)
2 d2c60a1 d.15.2.2 (A:43-122) Mi 97.8 8.9E-05 6.5E-09 58.1 9.8 70 24-100 7-79 (80)
3 d2nptb1 d.15.2.2 (B:42-123) Mi 97.7 0.00014 1E-08 57.2 9.6 71 24-101 7-80 (82)
4 d2bkfa1 d.15.2.2 (A:1-85) Next 96.9 0.00096 7E-08 54.3 7.2 72 23-99 8-82 (85)
5 d1oeya_ d.15.2.2 (A:) Neutroph 96.4 0.0034 2.5E-07 50.3 6.7 60 30-91 14-73 (82)
6 d1nc8a_ g.40.1.1 (A:) HIV nucl 94.1 0.011 7.7E-07 36.6 1.9 23 814-836 3-25 (29)
7 d1wmha_ d.15.2.2 (A:) Protein 93.4 0.35 2.5E-05 37.9 10.0 65 26-92 7-75 (83)
8 d1wj2a_ g.79.1.1 (A:) WRKY DNA 91.5 0.18 1.3E-05 39.0 6.0 38 306-343 31-68 (71)
9 d1oeyj_ d.15.2.2 (J:) Neutroph 90.1 0.58 4.2E-05 38.1 8.1 61 27-91 14-78 (105)
10 d1pqsa_ d.15.2.2 (A:) Cell div 89.2 0.29 2.1E-05 38.0 5.4 53 32-86 4-61 (77)
11 d2npta1 d.15.2.2 (A:4-108) Mit 88.1 0.39 2.8E-05 38.9 5.7 50 38-90 34-83 (105)
12 d2exfa1 g.40.1.1 (A:12-53) HIV 86.8 0.13 9.1E-06 35.8 1.7 16 820-835 25-40 (42)
13 d2exfa1 g.40.1.1 (A:12-53) HIV 82.0 0.27 2E-05 34.0 1.7 19 818-836 2-20 (42)
14 d1wmhb_ d.15.2.2 (B:) Partitio 80.1 4.7 0.00034 31.3 8.5 68 28-99 10-79 (82)
15 d1dsqa_ g.40.1.1 (A:) Nucleic 79.9 0.42 3.1E-05 27.9 1.7 17 819-835 4-20 (26)
16 d1a6bb_ g.40.1.1 (B:) Zinc fin 78.7 0.44 3.2E-05 31.5 1.8 19 818-836 11-29 (40)
17 d2zeqa1 d.15.1.1 (A:1-78) Ubiq 77.2 1.7 0.00012 34.0 5.4 42 24-65 7-48 (78)
18 d1ogwa_ d.15.1.1 (A:) Ubiquiti 75.7 2 0.00014 33.3 5.4 42 24-65 5-46 (76)
19 d1z2ma2 d.15.1.1 (A:79-154) In 71.6 3 0.00022 32.2 5.5 42 24-65 8-49 (76)
20 d1ttna1 d.15.1.1 (A:21-100) De 68.5 2.9 0.00021 32.7 4.9 43 23-65 7-49 (80)
21 d1bt0a_ d.15.1.1 (A:) Rub1 {Mo 68.2 3.7 0.00027 31.3 5.4 42 24-65 5-46 (73)
22 d1wx9a1 d.15.1.1 (A:8-80) Larg 68.0 2.5 0.00018 32.4 4.3 41 24-64 5-45 (73)
23 d2bwfa1 d.15.1.1 (A:2-74) DSK2 65.6 4.5 0.00033 30.8 5.4 38 28-65 9-46 (73)
24 d1wh3a_ d.15.1.1 (A:) 2'-5'-ol 65.1 5 0.00037 31.7 5.8 41 24-64 12-52 (87)
25 d1z2ma1 d.15.1.1 (A:3-78) Inte 64.5 7 0.00051 30.0 6.4 41 24-64 5-45 (76)
26 d1wy8a1 d.15.1.1 (A:8-83) Ubiq 64.1 5.9 0.00043 30.5 5.8 42 24-65 5-48 (76)
27 d1v86a_ d.15.1.1 (A:) hypothet 63.5 2.4 0.00018 34.4 3.5 40 24-64 22-61 (95)
28 d1yqba1 d.15.1.1 (A:15-98) Ubi 61.6 5 0.00037 31.5 5.1 37 29-65 16-52 (84)
29 d1wgga_ d.15.1.1 (A:) Ubiquiti 61.5 2.9 0.00021 34.0 3.6 41 24-64 12-52 (96)
30 d1wxva1 d.15.1.1 (A:7-87) Bag- 60.6 5.9 0.00043 30.9 5.3 38 28-65 9-51 (81)
31 d1m94a_ d.15.1.1 (A:) Ubiquiti 60.5 5.4 0.00039 30.4 4.9 42 24-65 6-47 (73)
32 d1j8ca_ d.15.1.1 (A:) Ubiquiti 60.5 6.7 0.00049 32.0 5.9 40 25-65 38-77 (103)
33 d1v5ta_ d.15.1.1 (A:) 8430435i 59.9 2.9 0.00021 33.4 3.3 41 24-64 12-52 (90)
34 d2al3a1 d.15.1.2 (A:10-85) Tet 59.9 4.4 0.00032 31.3 4.1 40 26-65 7-46 (76)
35 d1exqa_ c.55.3.2 (A:) Retrovir 57.8 9.6 0.0007 33.2 6.9 65 461-535 5-69 (154)
36 d1t0ya_ d.15.1.1 (A:) Ubiquiti 57.6 8.4 0.00061 30.6 5.8 64 34-101 20-83 (90)
37 d1v6ea_ d.15.1.1 (A:) Ubiquiti 56.6 5 0.00037 32.4 4.3 32 34-65 23-54 (95)
38 d1euvb_ d.15.1.1 (B:) SUMO-1 ( 56.5 7.4 0.00054 30.0 5.2 38 28-65 12-49 (79)
39 d2faza1 d.15.1.1 (A:1-76) Ubiq 56.5 8.4 0.00061 29.6 5.5 41 25-65 6-48 (76)
40 d2uyzb1 d.15.1.1 (B:20-96) SUM 54.1 8.3 0.0006 29.6 5.1 40 25-64 8-47 (77)
41 d1k8rb_ d.15.1.5 (B:) Protein 50.7 7.9 0.00057 31.1 4.3 73 24-102 5-78 (95)
42 d1wjna_ d.15.1.1 (A:) Tubulin- 47.7 12 0.00086 30.1 5.2 51 30-80 23-73 (97)
43 d1zkha1 d.15.1.1 (A:1-86) Spli 47.0 14 0.00099 29.0 5.4 39 27-65 19-57 (86)
44 d1c6va_ c.55.3.2 (A:) Retrovir 45.7 17 0.0012 31.6 6.5 62 461-532 6-67 (159)
45 d1wgra_ d.15.1.5 (A:) Growth f 43.1 3.9 0.00029 33.4 1.4 32 26-57 16-47 (100)
46 d1uela_ d.15.1.1 (A:) Ubiquiti 41.8 19 0.0014 28.5 5.7 42 24-65 5-49 (95)
47 d1wjua_ d.15.1.1 (A:) NEDD8 ul 40.3 14 0.001 30.0 4.5 39 27-65 27-65 (100)
48 d1v5oa_ d.15.1.1 (A:) 1700011n 40.1 15 0.0011 29.9 4.7 37 28-64 20-56 (102)
49 d1oqya4 d.15.1.1 (A:1-77) Ubiq 37.7 15 0.0011 27.9 4.2 42 24-65 7-51 (77)
50 d1wx8a1 d.15.1.1 (A:8-90) 4931 36.1 15 0.0011 28.5 3.9 41 24-65 15-55 (83)
51 d1cxqa_ c.55.3.2 (A:) Retrovir 35.3 65 0.0047 26.9 8.7 69 460-533 8-76 (147)
52 d2bw3a2 c.55.3.12 (A:163-609) 30.9 1E+02 0.0073 30.2 10.8 67 489-559 44-114 (447)
53 d1wm3a_ d.15.1.1 (A:) SUMO-2 { 30.0 39 0.0028 25.1 5.4 38 28-65 10-47 (72)
54 d2c9wb1 d.15.1.1 (B:2-104) Elo 28.9 39 0.0029 27.3 5.5 38 28-65 9-46 (103)
55 d2zjrz1 g.41.8.5 (Z:2-59) Ribo 28.2 12 0.00087 27.2 1.8 41 794-834 6-46 (58)
56 d1uh6a_ d.15.1.1 (A:) Ubiquiti 27.8 30 0.0022 27.8 4.5 38 27-64 36-73 (100)
57 d1we6a_ d.15.1.1 (A:) Splicing 20.6 43 0.0032 27.3 4.2 38 28-65 39-77 (111)
58 d1px9a_ g.3.7.2 (A:) Ergtoxin 20.6 3.9 0.00028 26.7 -2.0 11 823-833 24-34 (42)
No 1
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.16 E-value=2.7e-06 Score=70.97 Aligned_cols=59 Identities=12% Similarity=0.151 Sum_probs=52.3
Q ss_pred cCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEecCCCCCceEeecChHHHHHHHhccC
Q 003242 28 GGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYFLPGNKQTLITICNDKDLKRMFDFHE 90 (837)
Q Consensus 28 gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~l~~~~~~l~~~~~d~dl~~m~~~~~ 90 (837)
||+++.+.|+.+++|.||..+|.+.|++ +++.|||+ .|+.-++++.+|+||+++|+...
T Consensus 20 ~~D~~~~~l~~~it~~dL~~kI~~rf~~--~~~~lkY~--Dedgd~v~i~sD~Dl~~ai~~~~ 78 (85)
T d1ip9a_ 20 KDDIFALMLKGDTTYKELRSKIAPRIDT--DNFKLQTK--LFDGSGEEIKTDSQVSNIIQAKL 78 (85)
T ss_dssp TTCCEEEEECSCCCHHHHHHHHHHHHTS--SCEEEEEC--CSSSCCSCCCSHHHHHHHHHTTC
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHhCC--CceEEEEE--cCCCCEEEEeCHHHHHHHHHhcC
Confidence 7899999999999999999999999975 47999996 55567789999999999998543
No 2
>d2c60a1 d.15.2.2 (A:43-122) Mitogen-activated protein kinase kinase kinase 3, MEKK 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.75 E-value=8.9e-05 Score=58.15 Aligned_cols=70 Identities=19% Similarity=0.434 Sum_probs=57.8
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEecCCCCCceEeecChHHHHHHHhccCC---ceeEEEEEe
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYFLPGNKQTLITICNDKDLKRMFDFHEG---SVTADVFVI 100 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~l~~~~~~l~~~~~d~dl~~m~~~~~~---~~~~~v~~~ 100 (837)
++|. ||.|||-++|-+.|.|+..|+-..|| ..+.+.|. |...+|++.+-+||++-++-.+. -..++|.+.
T Consensus 7 fE~~-gEkRIi~f~RPv~~~dl~~kv~~afG---q~ldl~y~---n~El~IPl~~Q~DLDkAvellDrs~~~ksLrilL~ 79 (80)
T d2c60a1 7 FEHN-GERRIIAFSRPVKYEDVEHKVTTVFG---QPLDLHYM---NNELSILLKNQDDLDKAIDILDRSSSMKSLRILLL 79 (80)
T ss_dssp EEET-TEEEEEEECSSCCHHHHHHHHHHHHS---SCCEEEEE---CSSCEEECCSHHHHHHHHHHHHHCSSCCSEEEEEE
T ss_pred EEec-CceEEEecCCCccHHHHHHHHHHHhC---CeeeeEEe---cCeEEEecccHHHHHHHHHHHccCcccceeEEEEe
Confidence 4554 79999999999999999999999999 67889998 77899999999999998873222 223777664
No 3
>d2nptb1 d.15.2.2 (B:42-123) Mitogen-activated protein kinase kinase kinase 2, MEKK 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.65 E-value=0.00014 Score=57.24 Aligned_cols=71 Identities=15% Similarity=0.301 Sum_probs=58.9
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEecCCCCCceEeecChHHHHHHHhcc---CCceeEEEEEe
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYFLPGNKQTLITICNDKDLKRMFDFH---EGSVTADVFVI 100 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~l~~~~~~l~~~~~d~dl~~m~~~~---~~~~~~~v~~~ 100 (837)
++|. ||.|||-++|-+.|.|+..|+...|| ..+.+.|. |..-+|++.+-+||++-++-. ..-..++|.++
T Consensus 7 fE~~-gEkRIi~f~RPv~~~dl~~kv~~afG---q~ldl~y~---n~EL~IPl~~Q~DLDkAvellDrs~~~ksLrilL~ 79 (82)
T d2nptb1 7 FEHR-GEKRILQFPRPVKLEDLRSKAKIAFG---QSMDLHYT---NNELVIPLTTQDDLDKAVELLDRSIHMKSLKILLV 79 (82)
T ss_dssp EEET-TEEEEEEECSSCCHHHHHHHHHHHHT---SCEEEEEE---ETTEEEECCCHHHHHHHHHHHHHCSSCCSEEEEEE
T ss_pred EEec-CceEEEecCCCccHHHHHHHHHHHhC---CeeeEEEe---cCeEEEecccHHHHHHHHHHHccCccccceEEEEE
Confidence 4554 79999999999999999999999999 78899998 668999999999999988732 22234777776
Q ss_pred c
Q 003242 101 G 101 (837)
Q Consensus 101 ~ 101 (837)
.
T Consensus 80 ~ 80 (82)
T d2nptb1 80 I 80 (82)
T ss_dssp E
T ss_pred e
Confidence 4
No 4
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.93 E-value=0.00096 Score=54.33 Aligned_cols=72 Identities=13% Similarity=0.315 Sum_probs=54.0
Q ss_pred CeEeecCceEE--EEeCCCCChHHHHHHHHHHhCCCCcceEEEEecCCCCCceEeecChHHHHHHHhcc-CCceeEEEEE
Q 003242 23 SLSYDGGEANA--VAINPETHFGDLKLKLAELLNLEYKSLSVKYFLPGNKQTLITICNDKDLKRMFDFH-EGSVTADVFV 99 (837)
Q Consensus 23 ~~~y~gg~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~l~~~~~~l~~~~~d~dl~~m~~~~-~~~~~~~v~~ 99 (837)
+..| ||+|+- ++.+.+++|.+|..+|...|+++ .+.|||. .++.-.|.|++|+||+.-++.. -.+..+++.|
T Consensus 8 Kvtf-~~dt~RF~ls~~~~~~~~~L~~~i~~rf~l~--~~~lkY~--Ddd~e~v~l~~d~dl~E~~~~a~~~~~~irl~v 82 (85)
T d2bkfa1 8 NVTF-KNEIQSFLVSDPENTTWADIEAMVKVSFDLN--TIQIKYL--DEENEEVSINSQGEYEEALKMAVKQGNQLQMQV 82 (85)
T ss_dssp EEEE-TTEEEEEEESCGGGCCHHHHHHHHHHHHTCS--SEEEEEE--CTTSCEEEECSHHHHHHHHHHHHHTTTEEEEEE
T ss_pred EEEE-CCceEEEEecCCCCCcHHHHHHHHHHhcCcc--cceEEEE--cCCCCEEEEecHHHHHHHHHHHhcCCCEEEEEE
Confidence 3455 788866 45578899999999999999975 6999994 4447789999999999877621 1233566655
No 5
>d1oeya_ d.15.2.2 (A:) Neutrophil cytosol factor 2 (p67phox component of NADPH oxidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.37 E-value=0.0034 Score=50.28 Aligned_cols=60 Identities=12% Similarity=0.299 Sum_probs=54.0
Q ss_pred ceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEecCCCCCceEeecChHHHHHHHhccCC
Q 003242 30 EANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYFLPGNKQTLITICNDKDLKRMFDFHEG 91 (837)
Q Consensus 30 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~l~~~~~~l~~~~~d~dl~~m~~~~~~ 91 (837)
=|-+|.|+|+.+|++|..+|+++|.+..+.++|.|. |.++.-++.++ +|+|+.+...-.+
T Consensus 14 fTVal~v~~G~~y~~L~~lvs~KL~l~~~~~~LSY~-~~~~~e~v~ls-ee~me~aWs~v~~ 73 (82)
T d1oeya_ 14 YTVVMKTQPGLPYSQVRDMVSKKLELRLEHTKLSYR-PRDSNELVPLS-EDSMKDAWGQVKN 73 (82)
T ss_dssp SEEEEEECTTCCHHHHHHHHHHHTTCCGGGCCEEEC-CTTCSSCEECC-TTTHHHHHTTCBT
T ss_pred EEEEEEccCCCCHHHHHHHHHHHhCCChhheEEEec-cCCCCceeccc-hHHHHHHHHhccC
Confidence 478999999999999999999999999999999995 88888888886 9999999886554
No 6
>d1nc8a_ g.40.1.1 (A:) HIV nucleocapsid {Human immunodeficiency virus type 2 [TaxId: 11709]}
Probab=94.13 E-value=0.011 Score=36.56 Aligned_cols=23 Identities=22% Similarity=0.706 Sum_probs=20.2
Q ss_pred ccceEeCCCCCCCCcCcCCCCCC
Q 003242 814 EHRTVTCTKCKGIGHNKLSCKET 836 (837)
Q Consensus 814 ~kr~~~Cs~C~~~GHNk~tC~~~ 836 (837)
.+++++|=+|+..||-.+.|.++
T Consensus 3 qr~~ikCfNCGkeGH~ar~CrAP 25 (29)
T d1nc8a_ 3 QRKVIRCWNCGKEGHSARQCRAP 25 (29)
T ss_dssp CCCCCBCTTTSCBSSCGGGCCSS
T ss_pred CcceeEeecCCccchhhhhccCc
Confidence 35678999999999999999875
No 7
>d1wmha_ d.15.2.2 (A:) Protein kinase C, iota type {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.38 E-value=0.35 Score=37.94 Aligned_cols=65 Identities=15% Similarity=0.384 Sum_probs=51.8
Q ss_pred eecCceEEEEeCCCCChHHHHHHHHHHhCCCCc-ceEEEEecCCCCCceEeecChHHHHHHH---hccCCc
Q 003242 26 YDGGEANAVAINPETHFGDLKLKLAELLNLEYK-SLSVKYFLPGNKQTLITICNDKDLKRMF---DFHEGS 92 (837)
Q Consensus 26 y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~y~l~~~~~~l~~~~~d~dl~~m~---~~~~~~ 92 (837)
+-+|+.-|..++.+|+|.+|-.++.++|++... .+|+|. +-.|.|. ++|++...|..-+ +-+.++
T Consensus 7 ~y~G~i~it~~~~~it~e~l~~evr~~C~f~~~q~fT~KW-iDeEGDP-CTISSQmEL~EA~RLye~n~ds 75 (83)
T d1wmha_ 7 YYRGDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKW-IDEEGDP-CTVSSQLELEEAFRLYELNKDS 75 (83)
T ss_dssp EETTEEEEEEECTTCCHHHHHHHHHHHTTCCTTCCCEEEE-ECTTSCE-EECCSHHHHHHHHHHHHHTTCS
T ss_pred EecCeEEEEecCCCccHHHHHHHHHHHhCCCcCCcEEEEE-EcCCCCc-eeeecHHHHHHHHHHHHccCCc
Confidence 347888899999999999999999999988775 789999 5555454 7899999998555 444443
No 8
>d1wj2a_ g.79.1.1 (A:) WRKY DNA-binding protein 4 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=91.51 E-value=0.18 Score=39.01 Aligned_cols=38 Identities=13% Similarity=0.232 Sum_probs=33.5
Q ss_pred EEEEEeccCCCceEEEEEEeCCcceEEEEeecCCCccC
Q 003242 306 RASGMCAAEGCSWSFYASWVPSERVFKIKKMNETHTCG 343 (837)
Q Consensus 306 r~~~~C~~~gCpwri~as~~~~~~~~~I~~~~~~H~C~ 343 (837)
|..++|+..||+++=..-+..++....+.++.++|||.
T Consensus 31 RsYYrCt~~~C~a~K~Vqr~~~d~~~~~vtY~G~H~h~ 68 (71)
T d1wj2a_ 31 RSYYKCTTPGCGVRKHVERAATDPKAVVTTYEGKHNHD 68 (71)
T ss_dssp EEEEEEECSSCEEEEEEEEETTTTSEEEEEEESCCSSC
T ss_pred eEEEEccccCCCCcceEEEEcCCCCEEEEEEeeEeCCC
Confidence 66789999999999999888877777788999999998
No 9
>d1oeyj_ d.15.2.2 (J:) Neutrophil cytosol factor 4 (p40phox component of NADPH oxidase) {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.06 E-value=0.58 Score=38.06 Aligned_cols=61 Identities=15% Similarity=0.215 Sum_probs=51.8
Q ss_pred ecCceEEEEeCCCC----ChHHHHHHHHHHhCCCCcceEEEEecCCCCCceEeecChHHHHHHHhccCC
Q 003242 27 DGGEANAVAINPET----HFGDLKLKLAELLNLEYKSLSVKYFLPGNKQTLITICNDKDLKRMFDFHEG 91 (837)
Q Consensus 27 ~gg~~~~~~v~~~~----~~~~~~~~~~~~~~~~~~~~~~~y~l~~~~~~l~~~~~d~dl~~m~~~~~~ 91 (837)
.|+.+|=|.|..+. +|.||..-+...|+ ...+.|-|.=|..| ||-|-+|||++=|++..-+
T Consensus 14 ~~~~~rDI~veedl~~~P~ykdLl~lmr~~f~--~~dIaLNYrD~eGD--LIRllddeDv~LMv~~~~~ 78 (105)
T d1oeyj_ 14 TISTIKDIAVEEDLSSTPLLKDLLELTRREFQ--REDIALNYRDAEGD--LVRLLSDEDVALMVRQARG 78 (105)
T ss_dssp TEEEEEEEEECSCTTCCCCHHHHHHHHHHHHC--CSSEEEEEECTTSC--EEECCSHHHHHHHHHHCCC
T ss_pred CcceeeeEEEccccccCccHHHHHHHHHHHhc--cceeEeeeecCCCC--EEEEcchhhHHHHHHHhcc
Confidence 36889999999886 79999999999997 46899999755544 9999999999999987543
No 10
>d1pqsa_ d.15.2.2 (A:) Cell division control protein 24, CDC24, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.23 E-value=0.29 Score=38.01 Aligned_cols=53 Identities=13% Similarity=0.188 Sum_probs=41.7
Q ss_pred EEEEeCCCCChHHHHHHHHHHhCCCCc-----ceEEEEecCCCCCceEeecChHHHHHHH
Q 003242 32 NAVAINPETHFGDLKLKLAELLNLEYK-----SLSVKYFLPGNKQTLITICNDKDLKRMF 86 (837)
Q Consensus 32 ~~~~v~~~~~~~~~~~~~~~~~~~~~~-----~~~~~y~l~~~~~~l~~~~~d~dl~~m~ 86 (837)
-.+.|+.+|+|.+|+.|+..++-...+ ...|||+= ||.-.|++.+|||...-+
T Consensus 4 fTLvV~~~i~f~~L~~kI~~Kia~~~~~~~~~~~rlrY~D--eDGD~V~i~sddd~~~a~ 61 (77)
T d1pqsa_ 4 FTLLVEKVWNFDDLIMAINSKISNTHNNNISPITKIKYQD--EDGDFVVLGSDEDWNVAK 61 (77)
T ss_dssp EEEECTTCCCSHHHHHHHHHHTTTTTSSCSCSTTCCEEEE--TTTEEEECCSTTHHHHHH
T ss_pred EEEEEEcCcCHHHHHHHHHHHHHhccCCCCCccceEEEEc--CCCCEEEEeccchHHHHH
Confidence 468899999999999999988732211 34899974 788899999999997443
No 11
>d2npta1 d.15.2.2 (A:4-108) Mitogen activated protein kinase kinase 5, Map2k5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=88.15 E-value=0.39 Score=38.93 Aligned_cols=50 Identities=22% Similarity=0.399 Sum_probs=40.9
Q ss_pred CCCChHHHHHHHHHHhCCCCcceEEEEecCCCCCceEeecChHHHHHHHhccC
Q 003242 38 PETHFGDLKLKLAELLNLEYKSLSVKYFLPGNKQTLITICNDKDLKRMFDFHE 90 (837)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~l~~~~~~l~~~~~d~dl~~m~~~~~ 90 (837)
+.++|.|+...|...+. +...-.|+| ..||--=|+|.+||.|+-|++++-
T Consensus 34 ~~l~F~dvL~~i~q~~p-~at~taFEY--EDEdGDRITVRSDEEl~AMisyy~ 83 (105)
T d2npta1 34 PQLLFRDVLDVIGQVLP-EATTTAFEY--EDEDGDRITVRSDEEMKAMLSYYY 83 (105)
T ss_dssp -CCCHHHHHHHHHHHST-TSCCSEEEE--ECTTSCEEEECSHHHHHHHHHHHH
T ss_pred ceeeHHHHHHHHHHhcc-cccccceee--ccccCCEeEEccHHHHHHHHHHHH
Confidence 58999999999999996 334567888 466766799999999999999763
No 12
>d2exfa1 g.40.1.1 (A:12-53) HIV nucleocapsid {Human immunodeficiency virus type 1, different isolates [TaxId: 11676]}
Probab=86.75 E-value=0.13 Score=35.80 Aligned_cols=16 Identities=44% Similarity=0.902 Sum_probs=8.2
Q ss_pred CCCCCCCCcCcCCCCC
Q 003242 820 CTKCKGIGHNKLSCKE 835 (837)
Q Consensus 820 Cs~C~~~GHNk~tC~~ 835 (837)
|-+|++.||-.+.||.
T Consensus 25 C~~Cg~~GH~~~~Cp~ 40 (42)
T d2exfa1 25 CWKCGKEGHQMKDCTE 40 (42)
T ss_dssp CSSSCCSSSCTTTCCS
T ss_pred cccCCCCCeecccCCC
Confidence 5555555555555544
No 13
>d2exfa1 g.40.1.1 (A:12-53) HIV nucleocapsid {Human immunodeficiency virus type 1, different isolates [TaxId: 11676]}
Probab=81.96 E-value=0.27 Score=34.02 Aligned_cols=19 Identities=32% Similarity=0.805 Sum_probs=17.4
Q ss_pred EeCCCCCCCCcCcCCCCCC
Q 003242 818 VTCTKCKGIGHNKLSCKET 836 (837)
Q Consensus 818 ~~Cs~C~~~GHNk~tC~~~ 836 (837)
++|-+|++.||..+.||.+
T Consensus 2 i~C~~Cg~~GH~~~~Cp~~ 20 (42)
T d2exfa1 2 VKCFNCGKEGHTARNCRAP 20 (42)
T ss_dssp CCCTTTCCSSSCTTTCSSC
T ss_pred CccccCCCcCcCcccCcCC
Confidence 5899999999999999974
No 14
>d1wmhb_ d.15.2.2 (B:) Partitioning defective-6 homolog alpha, PAR-6 alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.10 E-value=4.7 Score=31.28 Aligned_cols=68 Identities=16% Similarity=0.211 Sum_probs=55.7
Q ss_pred cCceEEEEeCCC--CChHHHHHHHHHHhCCCCcceEEEEecCCCCCceEeecChHHHHHHHhccCCceeEEEEE
Q 003242 28 GGEANAVAINPE--THFGDLKLKLAELLNLEYKSLSVKYFLPGNKQTLITICNDKDLKRMFDFHEGSVTADVFV 99 (837)
Q Consensus 28 gg~~~~~~v~~~--~~~~~~~~~~~~~~~~~~~~~~~~y~l~~~~~~l~~~~~d~dl~~m~~~~~~~~~~~v~~ 99 (837)
|.|-|=.+++|+ -+|.||-+-|..+-.+..-.+++-|.=| +--|.+|.|||-+.+-+...- .=+||+|
T Consensus 10 dAEfRRFsl~r~~~~~fe~F~~Lle~~H~l~~~~f~i~Y~D~--hgDLLPINNDdNf~kA~~sa~--PlLRi~i 79 (82)
T d1wmhb_ 10 DAEFRRFALPRASVSGFQEFSRLLRAVHQIPGLDVLLGYTDA--HGDLLPLTNDDSLHRALASGP--PPLRLLV 79 (82)
T ss_dssp TTEEEEEEEEGGGCCCHHHHHHHHHHHTTCTTCCCEEEEECT--TSCEEECCSHHHHHHHTTSSS--SCEEEEE
T ss_pred CceEEEeeeccccccCHHHHHHHHHHHcCCCCCcEEEEEecC--CCCcccccCchHHHHHHHhcC--CceeEeE
Confidence 566677788876 7999999999998898878999999987 356999999999999887553 3477776
No 15
>d1dsqa_ g.40.1.1 (A:) Nucleic acid binding protein p14 {Mouse mammary tumor virus [TaxId: 11757]}
Probab=79.87 E-value=0.42 Score=27.88 Aligned_cols=17 Identities=47% Similarity=0.935 Sum_probs=15.5
Q ss_pred eCCCCCCCCcCcCCCCC
Q 003242 819 TCTKCKGIGHNKLSCKE 835 (837)
Q Consensus 819 ~Cs~C~~~GHNk~tC~~ 835 (837)
-|=.|+..||-++.|+.
T Consensus 4 vcfscgktghikkdck~ 20 (26)
T d1dsqa_ 4 VCFSCGKTGHIKRDCKE 20 (26)
T ss_dssp BCTTTCCBSSCTTTTTC
T ss_pred EEEecCCcccchhhhhh
Confidence 58899999999999986
No 16
>d1a6bb_ g.40.1.1 (B:) Zinc finger protein ncp10 {Moloney murine leukemia virus, MoMLV [TaxId: 11801]}
Probab=78.73 E-value=0.44 Score=31.46 Aligned_cols=19 Identities=32% Similarity=0.669 Sum_probs=17.3
Q ss_pred EeCCCCCCCCcCcCCCCCC
Q 003242 818 VTCTKCKGIGHNKLSCKET 836 (837)
Q Consensus 818 ~~Cs~C~~~GHNk~tC~~~ 836 (837)
-+|-.|++.||=.+.||..
T Consensus 11 DQCAyCke~GHW~~dCPkk 29 (40)
T d1a6bb_ 11 DQCAYCKEKGHWAKDCPKK 29 (40)
T ss_dssp SSCSSSCCTTCCTTSCSSS
T ss_pred hhhHHHhhcCchhhhCccC
Confidence 4899999999999999974
No 17
>d2zeqa1 d.15.1.1 (A:1-78) Ubiquitin-like domain of parkin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=77.24 E-value=1.7 Score=34.00 Aligned_cols=42 Identities=17% Similarity=0.230 Sum_probs=39.0
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
+++..|+|.-+.|+.+.|-.+|+.+|.+..|++++...|-|.
T Consensus 7 Vk~~~g~t~~l~v~~~~tV~~lK~~i~~~~gip~~~qrLi~~ 48 (78)
T d2zeqa1 7 VRFNSSYGFPVEVDSDTSILQLKEVVAKRQGVPADQLRVIFA 48 (78)
T ss_dssp EESSSSSCEEEEECTTCBHHHHHHHHHHHHTCCGGGEEEEET
T ss_pred EEcCCCCEEEEEEcccccHHHHHHHHHHHHCcChhHeEEEEe
Confidence 678899999999999999999999999999999988888883
No 18
>d1ogwa_ d.15.1.1 (A:) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.66 E-value=2 Score=33.31 Aligned_cols=42 Identities=10% Similarity=0.202 Sum_probs=38.9
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
+++..|++..+.|+.+.|-.+|+.+|++..+++++...|-|.
T Consensus 5 Vk~l~G~~~~l~v~~~~tV~~lK~~I~~~~gi~~~~qrL~~~ 46 (76)
T d1ogwa_ 5 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA 46 (76)
T ss_dssp EEETTSCEEEEECCTTSBHHHHHHHHHHHHCCCGGGEEEEET
T ss_pred EEcCCCCEEEEEECCCCcHHHHHHhhhhhcCCChHHEEeEEC
Confidence 467789999999999999999999999999999999999885
No 19
>d1z2ma2 d.15.1.1 (A:79-154) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.63 E-value=3 Score=32.17 Aligned_cols=42 Identities=10% Similarity=0.186 Sum_probs=38.6
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
++..+|++..+.|+.+.|-.+|+.+|++..|+.++...|-|.
T Consensus 8 Vk~~~G~~~~l~v~~~~tV~~lK~~I~~~~gi~~~~qrL~~~ 49 (76)
T d1z2ma2 8 VRNNKGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDLFWLTFE 49 (76)
T ss_dssp EECTTSCEEEEEECTTSBHHHHHHHHHHHHTCCGGGEEEEET
T ss_pred EEcCCCCEEEEEECCCCcHHHHHHHHHHHhcCChhHeEEEEC
Confidence 456789999999999999999999999999999999889884
No 20
>d1ttna1 d.15.1.1 (A:21-100) Dendritic cell-derived ubiquitin-like protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=68.52 E-value=2.9 Score=32.66 Aligned_cols=43 Identities=14% Similarity=0.094 Sum_probs=39.6
Q ss_pred CeEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 23 SLSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 23 ~~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
.+++..|++.-+.|+++.+-.+|+.+|.+..|++.+...|-|.
T Consensus 7 ~Vk~~~G~~~~l~V~~~~tV~~lK~~I~~~~~ip~~~qrLi~~ 49 (80)
T d1ttna1 7 RLRLSTGKDLKLVVRSTDTVFHMKRRLHAAEGVEPGSQRWFFS 49 (80)
T ss_dssp EEEETTTEEEEEEECTTSHHHHHHHHHHHTTCCCSTTCEEEET
T ss_pred EEEcCCCCEEEEEECCcCcHHHHHHHHHHHhCCCcccEEEEEC
Confidence 3678899999999999999999999999999999998888884
No 21
>d1bt0a_ d.15.1.1 (A:) Rub1 {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=68.20 E-value=3.7 Score=31.29 Aligned_cols=42 Identities=14% Similarity=0.188 Sum_probs=38.2
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
++...|++..+.|+.+.+-.+|+.++++..|+.++...|-|.
T Consensus 5 Vk~~~G~~~~l~V~~~~tV~~lK~~i~~~~gi~~~~qrLi~~ 46 (73)
T d1bt0a_ 5 VKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYA 46 (73)
T ss_dssp EECTTSCEEEEECCTTCBHHHHHHHHHHHHCCCGGGEEEEET
T ss_pred EEeCCCCEEEEEECCCCcHHHHHHHHHHHhCCChHHEEEEEC
Confidence 456689999999999999999999999999999999898884
No 22
>d1wx9a1 d.15.1.1 (A:8-80) Large proline-rich protein BAT3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=67.96 E-value=2.5 Score=32.42 Aligned_cols=41 Identities=7% Similarity=0.189 Sum_probs=37.0
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEE
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKY 64 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y 64 (837)
++-.+|++.-+.|+.+.|-.+|+.+|++..|++.+...|-|
T Consensus 5 Vk~~~g~~~~l~V~~~~tV~~lK~~I~~~~gip~~~qrLi~ 45 (73)
T d1wx9a1 5 VKTLDSQTRTFIVGAQMNVKEFKEHIAASVSIPSEKQRLIY 45 (73)
T ss_dssp EECTTSCEEEEEECTTSBHHHHHHHHHHHHCCCTTTCCCEE
T ss_pred EEcCCCCEEEEEECCCChHHHHHHHHHHHhCCChHHEEEEE
Confidence 34567999999999999999999999999999998888888
No 23
>d2bwfa1 d.15.1.1 (A:2-74) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=65.59 E-value=4.5 Score=30.84 Aligned_cols=38 Identities=16% Similarity=0.227 Sum_probs=34.9
Q ss_pred cCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 28 GGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 28 gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
||++.-|.|+.+.+-.+|+.+|.+..|++++...|-|.
T Consensus 9 ~~~~~~i~v~~~~tV~~lK~~I~~~~gip~~~qrLi~~ 46 (73)
T d2bwfa1 9 GQDKWEVNVAPESTVLQFKEAINKANGIPVANQRLIYS 46 (73)
T ss_dssp TTEEEEEEECTTCBHHHHHHHHHHHHCCCGGGEEEEET
T ss_pred CCeEEEEEECCCChHHHHHHHHHHHHCcChHHeEEEEC
Confidence 67778899999999999999999999999999888883
No 24
>d1wh3a_ d.15.1.1 (A:) 2'-5'-oligoadenylate synthetase-like protein, OASL {Human (Homo sapiens) [TaxId: 9606]}
Probab=65.11 E-value=5 Score=31.72 Aligned_cols=41 Identities=24% Similarity=0.366 Sum_probs=37.8
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEE
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKY 64 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y 64 (837)
++..+|++..+.|+.+.+-.+|+++|.+..|++.+...|-|
T Consensus 12 Vk~~~g~~~~l~v~~~~tV~~lK~~I~~~~gip~~~qrLi~ 52 (87)
T d1wh3a_ 12 VKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPKKQQQLEF 52 (87)
T ss_dssp EEETTTEEEEEEECSSSBHHHHHHHHHHHTCCCTTTEEEEE
T ss_pred EECCCCCEEEEEECCcCcHHHHHHHHHHHHCcChHHeEEEe
Confidence 35668999999999999999999999999999999888888
No 25
>d1z2ma1 d.15.1.1 (A:3-78) Interferon-induced 15 kDa protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.49 E-value=7 Score=29.96 Aligned_cols=41 Identities=10% Similarity=0.186 Sum_probs=37.8
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEE
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKY 64 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y 64 (837)
++-.+|++-.+.|+++.+-.+|+.+|.+..|++++...|-|
T Consensus 5 Vk~l~G~~~~v~V~~~~tV~~lK~~I~~~~gip~~~QrLi~ 45 (76)
T d1z2ma1 5 VKMLAGNEFQVSLSSSMSVSELKAQITQKIGVHAFQQRLAV 45 (76)
T ss_dssp EEESSSCEEEEECCSSCCHHHHHHHHHHHHCCCGGGEEEEE
T ss_pred EEeCCCCEEEEEECCCCcHHHHHHHHHHHhccCCccEEEEE
Confidence 45578999999999999999999999999999999888888
No 26
>d1wy8a1 d.15.1.1 (A:8-83) Ubiquitin-like PHD and RING finger domain-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.11 E-value=5.9 Score=30.51 Aligned_cols=42 Identities=10% Similarity=0.226 Sum_probs=36.0
Q ss_pred eEeecC-ceEEE-EeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 24 LSYDGG-EANAV-AINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 24 ~~y~gg-~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
++...| +|..+ .|+++.+-.+|+.++.+..|++.+...|-|.
T Consensus 5 Vk~l~G~~t~~~~~v~~~~TV~~lK~~I~~~~gip~~~qrLi~~ 48 (76)
T d1wy8a1 5 VRTIDGSKTCTIEDVSRKATIEELRERVWALFDVRPECQRLFYR 48 (76)
T ss_dssp EEETTCSCEEEEEEECTTCBHHHHHHHHHHHSCCCTTTEEEEET
T ss_pred EEeCCCCceEEEeccCCCChHHHHHHHHHHHHCCCchhcEEEEE
Confidence 345556 67776 6999999999999999999999999999985
No 27
>d1v86a_ d.15.1.1 (A:) hypothetical D7wsu128e protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=63.48 E-value=2.4 Score=34.42 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=35.8
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEE
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKY 64 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y 64 (837)
+.| +|++.-|.|+.+.+..+|+.+|++..+++.+...|-|
T Consensus 22 V~~-~~k~~~i~v~~~~TV~~LK~~I~~~tgvp~~~q~Li~ 61 (95)
T d1v86a_ 22 IIW-NKTKHDVKVPLDSTGSELKQKIHSITGLPPAMQKVMY 61 (95)
T ss_dssp EEE-TTEEEEEEECTTSBHHHHHHHHHHHHCSCSTTCCCBS
T ss_pred EEE-CCEEEEEEECCCCcHHHHHHHHHHHhCCChhHEEEEe
Confidence 455 7888999999999999999999999999998888776
No 28
>d1yqba1 d.15.1.1 (A:15-98) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.60 E-value=5 Score=31.51 Aligned_cols=37 Identities=8% Similarity=0.182 Sum_probs=33.6
Q ss_pred CceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 29 GEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 29 g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
|++..+.|+.+.+..+|+.+|++..|+.++...|-|.
T Consensus 16 ~~~~~~~V~~~~tV~~lK~~i~~~~gi~~~~qrL~~~ 52 (84)
T d1yqba1 16 KDKEDFSVTDTCTIQQLKEEISQRFKAHPDQLVLIFA 52 (84)
T ss_dssp SCEEEEEEETTCBHHHHHHHHHHHHTCCGGGEEEEET
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHHCcCchhEEEEEe
Confidence 3457899999999999999999999999999999885
No 29
>d1wgga_ d.15.1.1 (A:) Ubiquitin carboxyl-terminal hydrolase 14 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=61.49 E-value=2.9 Score=34.05 Aligned_cols=41 Identities=15% Similarity=0.127 Sum_probs=36.8
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEE
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKY 64 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y 64 (837)
+.|.+|....+.|+.+.+-.+|+.+|.+..++..+...|-|
T Consensus 12 VK~~~~~~~~v~v~~~~tV~~lK~~i~~~~gvp~~~QkLi~ 52 (96)
T d1wgga_ 12 VKWGKEKFEGVELNTDEPPMVFKAQLFALTGVQPARQKVMV 52 (96)
T ss_dssp EEETTEEEEEEEEESSSCHHHHHHHHHHHTCCCTTTSCCEE
T ss_pred EEeCCCCEEEEEECCCCcHHHHHHHhhhhcCccceeeEEee
Confidence 57878877889999999999999999999999988777777
No 30
>d1wxva1 d.15.1.1 (A:7-87) Bag-family molecular chaperone regulator-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.62 E-value=5.9 Score=30.90 Aligned_cols=38 Identities=13% Similarity=0.207 Sum_probs=33.8
Q ss_pred cCceEEEEe-----CCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 28 GGEANAVAI-----NPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 28 gg~~~~~~v-----~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
||+++-|.| +.+.+..||+.+|++..|++++...|-|.
T Consensus 9 ~~~~~~i~v~~~~~~~~~Tv~~LK~~I~~~tgvp~~~QkL~~~ 51 (81)
T d1wxva1 9 SNEKHDLHVTSQQGSSEPVVQDLAQVVEEVIGVPQSFQKLIFK 51 (81)
T ss_dssp SSSEEEEEECCCSSSSSCBHHHHHHHHHHHTCCCTTTCEEEET
T ss_pred CCeeEEEEEecCCCCCccHHHHHHHHHHHHHCcCHHHEEeeec
Confidence 678888888 57899999999999999999999998873
No 31
>d1m94a_ d.15.1.1 (A:) Ubiquitin-like modifier protein hub1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=60.54 E-value=5.4 Score=30.42 Aligned_cols=42 Identities=17% Similarity=0.122 Sum_probs=37.9
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
++-..|++--+.|+.+.+-.+|+.+|++..|++++...|-|.
T Consensus 6 vk~~~Gk~~~v~V~~~~tV~~lK~~I~~~~~i~~~~q~Li~~ 47 (73)
T d1m94a_ 6 VNDRLGKKVRVKCLAEDSVGDFKKVLSLQIGTQPNKIVLQKG 47 (73)
T ss_dssp EEETTTEEEEEEECTTSBHHHHHHHHHHHHCCTTTSEEEESS
T ss_pred EECCCCCEEEEEECCcCcHHHHHHHHHHhhcccccEEEEEEE
Confidence 345579999999999999999999999999999999988884
No 32
>d1j8ca_ d.15.1.1 (A:) Ubiquitin-like N-terminal domain of PLIC-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=60.47 E-value=6.7 Score=32.04 Aligned_cols=40 Identities=10% Similarity=0.156 Sum_probs=34.8
Q ss_pred EeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 25 SYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 25 ~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
...| +++-|.|+.+.+..+|+.+|++.+|+......|-|.
T Consensus 38 k~~~-~~~~i~V~~~~tV~~LK~~I~~~~gi~~~~qrLi~~ 77 (103)
T d1j8ca_ 38 KTPK-EKEEFAVPENSSVQQFKEAISKRFKSQTDQLVLIFA 77 (103)
T ss_dssp ECSS-CEEEEEECTTCCHHHHHHHHHHHHCSCSSSEEEEET
T ss_pred ECCC-ccEEEEECCCChHHHHHHHHHHHHCcCHHHeeeeee
Confidence 3544 467899999999999999999999999999888884
No 33
>d1v5ta_ d.15.1.1 (A:) 8430435i17rik protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=59.90 E-value=2.9 Score=33.45 Aligned_cols=41 Identities=17% Similarity=0.170 Sum_probs=32.6
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEE
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKY 64 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y 64 (837)
+.+.|++..++.|+.+.+-.+|+.+|.+..++.++...|-|
T Consensus 12 Vk~~~~~~~i~~v~~~~tV~~LK~~i~~~t~vp~~~QkLi~ 52 (90)
T d1v5ta_ 12 VKWGGQEYSVTTLSEDDTVLDLKQFLKTLTGVLPERQKLLG 52 (90)
T ss_dssp EEETTEEEEECSCCSSSBHHHHHHHHHHHTCCCTTTCEEES
T ss_pred EEECCeEEEEEEeCCCCcHHHHHHHHHHHHcCCHHHhhhhh
Confidence 45544444444699999999999999999999888877766
No 34
>d2al3a1 d.15.1.2 (A:10-85) Tether containing UBX domain for GLUT4 (Tug) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=59.88 E-value=4.4 Score=31.33 Aligned_cols=40 Identities=13% Similarity=0.190 Sum_probs=36.5
Q ss_pred eecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 26 YDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 26 y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
+..|+..-|-|..+++..|...+.|+.+|++.+.+.|||+
T Consensus 7 ~~~~rR~~VKvtP~t~l~~VL~eaC~k~~~~~~~~~Lkh~ 46 (76)
T d2al3a1 7 APNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPSEYDLKFQ 46 (76)
T ss_dssp CTTSCEEEECCCTTSBHHHHHHHHHHHTTCCGGGCEEEET
T ss_pred CCCCcEEEEEeCCCcCHHHHHHHHHHHhCCChhHceeeeC
Confidence 4568888999999999999999999999999999999985
No 35
>d1exqa_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
Probab=57.77 E-value=9.6 Score=33.22 Aligned_cols=65 Identities=22% Similarity=0.201 Sum_probs=45.9
Q ss_pred eEEeecccccccccceEEEEEEecCCCCeEEEEEEEeccCChhHHHHHHHHHHHhhcCCCcEEEEecCchhHHHH
Q 003242 461 LLFLDSTSLRSKYHEILLTATALDGDDCIFPVAFAIVDTENDDSWNWFLEELRSAVSSSRSITFVSDKQKGLMES 535 (837)
Q Consensus 461 vl~iD~T~~~~~y~~~Ll~a~g~D~~~~~~plafalv~~E~~es~~wfL~~lk~~~~~~~p~~iisD~~~~l~~A 535 (837)
++.+|-||..++| .++.+|..-+ +..++.+ .+++.+.-.-||..+... ..|..|.||+.....++
T Consensus 5 ~W~~D~~~~~~k~-----ilv~vD~~Sr-~~~~~~~-~~~~~~~v~~~l~~~~~~---~~p~~I~sDnG~eF~s~ 69 (154)
T d1exqa_ 5 IWQLDCTHLEGKV-----ILVAVHVASG-YIEAEVI-PAETGQETAYFLLKLAGR---WPVKTIHTDNGSNFTGA 69 (154)
T ss_dssp EEEEEEEEETTEE-----EEEEEETTTT-EEEEEEE-SSSSHHHHHHHHHHHHHH---SCCCEEECCCCGGGTSH
T ss_pred ceeeEEEEECCEE-----EEEEEECcCC-cEEEEEe-cCcchHHHHhhhhhheec---cCCCEEEEcCCccccch
Confidence 7889999988764 4566776644 5666554 566777777777766543 34779999999887643
No 36
>d1t0ya_ d.15.1.1 (A:) Ubiquitin-like domain of tubulin folding cofactor B {Nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=57.60 E-value=8.4 Score=30.64 Aligned_cols=64 Identities=13% Similarity=0.090 Sum_probs=42.2
Q ss_pred EEeCCCCChHHHHHHHHHHhCCCCcceEEEEecCCCCCceEeecChHHHHHHHhccCCceeEEEEEec
Q 003242 34 VAINPETHFGDLKLKLAELLNLEYKSLSVKYFLPGNKQTLITICNDKDLKRMFDFHEGSVTADVFVIG 101 (837)
Q Consensus 34 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~l~~~~~~l~~~~~d~dl~~m~~~~~~~~~~~v~~~~ 101 (837)
+.++++|+-.+|+.||...+|+++..+.|-|.=.. +.....+.+|. ..+.++.=.....|.|+-
T Consensus 20 ~r~~~~~TV~~LK~kle~~~Gip~~~q~L~~~~~~-~~~~~~l~dd~---~~L~~ygi~dG~~Ihvvd 83 (90)
T d1t0ya_ 20 KKYPAGMSLNDLKKKLELVVGTTVDSMRIQLFDGD-DQLKGELTDGA---KSLKDLGVRDGYRIHAVD 83 (90)
T ss_dssp EEEETTSBHHHHHHHHHHHHCCCTTTEEEEEECSS-SSEEEECCCCS---SBTTTTTCCSSEEEEEEE
T ss_pred EecCCCCCHHHHHHHHHHHHCCChhheEEEEeCCC-CCcccccccCC---CCHHHCCCCCCCEEEEEe
Confidence 56899999999999999999999999999996322 23333333332 444443322234444443
No 37
>d1v6ea_ d.15.1.1 (A:) Ubiquitin-like domain of tubulin folding cofactor B {Mouse (Mus musculus) [TaxId: 10090]}
Probab=56.63 E-value=5 Score=32.43 Aligned_cols=32 Identities=9% Similarity=0.193 Sum_probs=30.1
Q ss_pred EEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 34 VAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 34 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
..++++++-.+|+.||...+|+++..+.|.|.
T Consensus 23 ~r~~~~~TV~~LK~kle~~tGip~~~qrL~~~ 54 (95)
T d1v6ea_ 23 KRYSRSLTIAEFKCKLELVVGSPASCMELELY 54 (95)
T ss_dssp EEECTTSBHHHHHHHHHHHTCSCTTTCBCEEE
T ss_pred EEeCCCCCHHHHHHHHHHHhCcCchhEEEEEe
Confidence 56899999999999999999999999999996
No 38
>d1euvb_ d.15.1.1 (B:) SUMO-1 (smt3 homologue) {Baker's yeast (Saccharomyces cerevisiae), smt3 [TaxId: 4932]}
Probab=56.53 E-value=7.4 Score=30.04 Aligned_cols=38 Identities=24% Similarity=0.166 Sum_probs=33.1
Q ss_pred cCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 28 GGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 28 gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
+|..--+.|.++.+++.|+..+|+..|++.+.+.|.|.
T Consensus 12 ~~~~~~f~v~~~~~~~~l~~~~~~~~~i~~~~~~l~f~ 49 (79)
T d1euvb_ 12 GSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYD 49 (79)
T ss_dssp SSCEEEEEEETTSCTHHHHHHHHHHTTCCGGGEEEEET
T ss_pred CCeEEEEEECCCCcHHHHHHHHHHHhCCChHhEEEEEC
Confidence 34444588999999999999999999999999999984
No 39
>d2faza1 d.15.1.1 (A:1-76) Ubiquitin-like PHD and RING finger domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.48 E-value=8.4 Score=29.56 Aligned_cols=41 Identities=22% Similarity=0.301 Sum_probs=35.3
Q ss_pred EeecC-ceEEE-EeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 25 SYDGG-EANAV-AINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 25 ~y~gg-~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
+...| +|..+ .|+++.+-.+|+.++++..|++.+...|-|.
T Consensus 6 ktl~Gk~t~~l~~v~~~~tV~~lK~~I~~~~gip~~~qrLi~~ 48 (76)
T d2faza1 6 RTMDGRQTHTVDSLSRLTKVEELRRKIQELFHVEPGLQRLFYR 48 (76)
T ss_dssp EETTSSCEEEEEEECTTCBHHHHHHHHHHHHCCCGGGEEEEET
T ss_pred EeCCCCcEEEEecCCCCCCHHHHHHHHHHHHCcChHHeEEEEe
Confidence 44556 57777 5999999999999999999999999999885
No 40
>d2uyzb1 d.15.1.1 (B:20-96) SUMO-1 (smt3 homologue) {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.13 E-value=8.3 Score=29.59 Aligned_cols=40 Identities=15% Similarity=0.148 Sum_probs=35.2
Q ss_pred EeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEE
Q 003242 25 SYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKY 64 (837)
Q Consensus 25 ~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y 64 (837)
....|...-+.|.++.+++.|+...|+..|++.+.+.|.|
T Consensus 8 ~~~dg~~v~f~v~~~t~l~kl~~~y~~~~~~~~~~~~f~f 47 (77)
T d2uyzb1 8 IGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLF 47 (77)
T ss_dssp ECTTCCEEEEEEETTSCTHHHHHHHHHHHTCCGGGEEEEE
T ss_pred ECCCCCEEEEEECCCChHHHHHHHHHHHhCCChhHEEEEE
Confidence 3446677778999999999999999999999999988887
No 41
>d1k8rb_ d.15.1.5 (B:) Protein kinase byr2 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=50.71 E-value=7.9 Score=31.10 Aligned_cols=73 Identities=11% Similarity=0.137 Sum_probs=42.3
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCc-ceEEEEecCCCCCceEeecChHHHHHHHhccCCceeEEEEEecc
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYK-SLSVKYFLPGNKQTLITICNDKDLKRMFDFHEGSVTADVFVIGT 102 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~y~l~~~~~~l~~~~~d~dl~~m~~~~~~~~~~~v~~~~~ 102 (837)
+-|.||.||++-|..- |.+.+.+..++|++.-. ...+.+ + |++=+-.-.|.+|......+++..+-|+++.+.
T Consensus 5 fI~~~GqTK~vni~gC--~~ai~~~~LkK~~l~d~~~~~v~v-~---d~~~~r~L~D~ELvtIC~~~~R~ER~RLIL~~k 78 (95)
T d1k8rb_ 5 FIACNGQTRAVQSRGD--YQKTLAIALKKFSLEDASKFIVCV-S---QSSRIKLITEEEFKQICFNSSSPERDRLIIVPK 78 (95)
T ss_dssp EECSTTCEEEEECCSC--HHHHHHHHHHHHTCCCTTSEEEEE-E---CSSSEEECCCC-------------CCCEEEEES
T ss_pred EEEcCCeEEEEEeccC--HHHHHHHHHHhcCCCCcceEEEEE-c---CCccEEEechHHHHHHHhCCCccccCceEEEeC
Confidence 4588999999999875 45799999999988643 334422 2 223355667788888888888888888888874
No 42
>d1wjna_ d.15.1.1 (A:) Tubulin-folding protein TbcE {Mouse (Mus musculus) [TaxId: 10090]}
Probab=47.67 E-value=12 Score=30.12 Aligned_cols=51 Identities=18% Similarity=0.117 Sum_probs=39.2
Q ss_pred ceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEecCCCCCceEeecChH
Q 003242 30 EANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYFLPGNKQTLITICNDK 80 (837)
Q Consensus 30 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~l~~~~~~l~~~~~d~ 80 (837)
++.=+.|+.+|+-.+|+.+|.+.+|++.+.+.|-|.-+..+..=+.+.+|.
T Consensus 23 ~~~~~kv~~~~TV~~LK~~i~~~~gip~~~qrL~y~~~~~~~~~~~l~~d~ 73 (97)
T d1wjna_ 23 QILEKQLPDSMTVQKVKGLLSRLLKVPVSELLLSYESSKMPGREIELENDL 73 (97)
T ss_dssp CCEEEEEETTSBHHHHHHHHHTTTTCCTTTCEEEEECTTSCSCEEECCCSS
T ss_pred ceEEEEcCCCCCHHHHHHHHHHHHCcChHHeEEEecCCCCCcccceecCCC
Confidence 334468999999999999999999999999999996554444444455443
No 43
>d1zkha1 d.15.1.1 (A:1-86) Splicing factor 3 subunit 1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.98 E-value=14 Score=29.05 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=36.0
Q ss_pred ecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 27 DGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 27 ~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
..|++.-+.|+.+.+-++|+.+|++..|++.+...|-|.
T Consensus 19 L~G~~~~l~v~~~~tV~~lK~~I~~~~~ip~~~q~Li~~ 57 (86)
T d1zkha1 19 LNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYE 57 (86)
T ss_dssp CSSCEEEEEECTTSBHHHHHHHHHHHTCCCTTTEEEEET
T ss_pred cCCeEEEEEECCCChHHHHHHHHHhhhcCChHHEEEEeC
Confidence 378899999999999999999999999999999888884
No 44
>d1c6va_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Simian immunodeficiency virus [TaxId: 11723]}
Probab=45.75 E-value=17 Score=31.64 Aligned_cols=62 Identities=19% Similarity=0.163 Sum_probs=40.5
Q ss_pred eEEeecccccccccceEEEEEEecCCCCeEEEEEEEeccCChhHHHHHHHHHHHhhcCCCcEEEEecCchhH
Q 003242 461 LLFLDSTSLRSKYHEILLTATALDGDDCIFPVAFAIVDTENDDSWNWFLEELRSAVSSSRSITFVSDKQKGL 532 (837)
Q Consensus 461 vl~iD~T~~~~~y~~~Ll~a~g~D~~~~~~plafalv~~E~~es~~wfL~~lk~~~~~~~p~~iisD~~~~l 532 (837)
+..+|-||+.++| + ++.+|.. ..+..|+ .+.+++.+....||..+... ..|..|.||+....
T Consensus 6 ~W~~D~t~~~~k~---i--l~~vD~~-Sr~~~~~-~~~~~~a~~v~~~l~~~~~~---~~~~~I~sDnG~~F 67 (159)
T d1c6va_ 6 TWQMDCTHLEGKI---V--IVAVHVA-SGFIEAE-VIPQETGRQTALFLLKLAGR---WPITHLHTDNGANF 67 (159)
T ss_dssp EEEEEEEEETTEE---E--EEEECTT-SCCEEEE-ECSSCSHHHHHHHHHHHHTT---SCCCEEECCCCSST
T ss_pred ceeeEEEEECCEE---E--EEEEECC-CCeEEEE-EeeccCHHHHHHHHHHHhhc---cCCceeEecCCCcc
Confidence 6789999987764 3 4455654 4556666 45666777766676655433 33457899998765
No 45
>d1wgra_ d.15.1.5 (A:) Growth factor receptor-bound protein 7, GRB-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.10 E-value=3.9 Score=33.45 Aligned_cols=32 Identities=9% Similarity=0.054 Sum_probs=28.4
Q ss_pred eecCceEEEEeCCCCChHHHHHHHHHHhCCCC
Q 003242 26 YDGGEANAVAINPETHFGDLKLKLAELLNLEY 57 (837)
Q Consensus 26 y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 57 (837)
+.+|.++.|.|+..++=.|++..|++++++..
T Consensus 16 ~~dg~~k~l~V~~~tTa~eV~~~l~~K~~~~~ 47 (100)
T d1wgra_ 16 SEDGACRSVEVAAGATARHVCEMLVQRAHALS 47 (100)
T ss_dssp ETTSCEEEEEECTTCCHHHHHHHHHCSSSCCC
T ss_pred ecCCCEEEEEECCCCcHHHHHHHHHHHhCCCC
Confidence 45688999999999999999999999998653
No 46
>d1uela_ d.15.1.1 (A:) Ubiquitin-like domain of Rad23 homolog B (Hhr23B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.80 E-value=19 Score=28.47 Aligned_cols=42 Identities=19% Similarity=0.190 Sum_probs=35.2
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhC---CCCcceEEEEe
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLN---LEYKSLSVKYF 65 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~y~ 65 (837)
++...|++..|.|+.+.+-.+|+.+|++..+ +..+...|-|.
T Consensus 5 vk~~~g~~~~l~v~~~~TV~~lK~~i~~~~~~~~i~~~~qrLi~~ 49 (95)
T d1uela_ 5 LKTLQQQTFKIDIDPEETVKALKEKIESEKGKDAFPVAGQKLIYA 49 (95)
T ss_dssp EEETTCCEEEEECCTTSBHHHHHHHHHHHHCTTTCCTTTEEEEET
T ss_pred EEeCCCCEEEEEECCCccHHHHHHHHHhhhcccCCCccceEEEEC
Confidence 4567899999999999999999999999875 55566777773
No 47
>d1wjua_ d.15.1.1 (A:) NEDD8 ultimate buster-1, NUB1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.35 E-value=14 Score=29.96 Aligned_cols=39 Identities=15% Similarity=0.151 Sum_probs=35.6
Q ss_pred ecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 27 DGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 27 ~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
..|++-.+.|+.+.+-.+|+.+|++.++++.+.+.|-|.
T Consensus 27 ~~g~~~~lev~~~~TV~~LK~~I~~~~gi~~~~qkLi~~ 65 (100)
T d1wjua_ 27 KKDRKNLLETRLHITGRELRSKIAETFGLQENYIKIVIN 65 (100)
T ss_dssp CCSSSEEEEEESSSBHHHHHHHHHHHTTCCSTTCEEEET
T ss_pred CCCeEEEEEECCCcHHHHHHHHHHHHHCCCCeeEEEEEc
Confidence 357899999999999999999999999999998888883
No 48
>d1v5oa_ d.15.1.1 (A:) 1700011n24rik protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=40.07 E-value=15 Score=29.89 Aligned_cols=37 Identities=8% Similarity=0.188 Sum_probs=34.1
Q ss_pred cCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEE
Q 003242 28 GGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKY 64 (837)
Q Consensus 28 gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y 64 (837)
-|.+--|.|+++++..+|+.+|....+++.+...|-|
T Consensus 20 ~~~t~~l~V~~~~tV~~LK~~Ie~~~gip~~~Q~Li~ 56 (102)
T d1v5oa_ 20 TEVTFSLQVNPDFELSNFRVLCELESGVPAEEAQIVY 56 (102)
T ss_dssp CCCEEEEEECTTCBHHHHHHHHHHHTCCCGGGBCEEE
T ss_pred CCCEEEEEECCcccHHHHHHHHHHHhCCCcceEEEEe
Confidence 3778899999999999999999999999998888888
No 49
>d1oqya4 d.15.1.1 (A:1-77) Ubiquitin-like domain of Rad23 homolog A (Hhr23a) {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.74 E-value=15 Score=27.92 Aligned_cols=42 Identities=14% Similarity=0.136 Sum_probs=35.0
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhC---CCCcceEEEEe
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLN---LEYKSLSVKYF 65 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~y~ 65 (837)
++-..|++..+.|+.+.+-.+|+++|++..| ++++...|-|.
T Consensus 7 vk~l~g~~~~l~v~~~~TV~~lK~~i~~~~g~~~i~~~~qrLi~~ 51 (77)
T d1oqya4 7 LKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYA 51 (77)
T ss_dssp EEETTTEEEEECCCTTCBHHHHHHHHHHHTCSSSCCSTEEEEESS
T ss_pred EECCCCCEEEEEECCCCcHHHHHHHHHHhcCCCCCChHHEEeEEC
Confidence 3456789999999999999999999999886 66677777774
No 50
>d1wx8a1 d.15.1.1 (A:8-90) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.09 E-value=15 Score=28.51 Aligned_cols=41 Identities=7% Similarity=0.139 Sum_probs=34.0
Q ss_pred eEeecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 24 LSYDGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 24 ~~y~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
+...||+ +-+.|+.+.+-.+|+.+|++..+++++...|-|.
T Consensus 15 Vk~~~~~-~~i~v~~~~tV~~lK~~I~~~~~v~~~~qrL~f~ 55 (83)
T d1wx8a1 15 VKTPQDC-HEFFLAENSNVRRFKKQISKYLHCNADRLVLIFT 55 (83)
T ss_dssp EECSSSE-EEEEEETTCCHHHHHHHHHHHTCSCTTTBCCEET
T ss_pred EEcCCCc-EEEEECCCChHHHHHHHHHHHhCCChhHEEEEEE
Confidence 3445555 4689999999999999999999999988888773
No 51
>d1cxqa_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Rous sarcoma virus RSV [TaxId: 11886]}
Probab=35.25 E-value=65 Score=26.95 Aligned_cols=69 Identities=10% Similarity=-0.044 Sum_probs=44.7
Q ss_pred CeEEeecccccccccceEEEEEEecCCCCeEEEEEEEeccCChhHHHHHHHHHHHhhcCCCcEEEEecCchhHH
Q 003242 460 PLLFLDSTSLRSKYHEILLTATALDGDDCIFPVAFAIVDTENDDSWNWFLEELRSAVSSSRSITFVSDKQKGLM 533 (837)
Q Consensus 460 ~vl~iD~T~~~~~y~~~Ll~a~g~D~~~~~~plafalv~~E~~es~~wfL~~lk~~~~~~~p~~iisD~~~~l~ 533 (837)
.++.+|-|+.....+.. +..+.+|..-+ +..++ ...+++...-..+|..+....+ .|..|.||......
T Consensus 8 ~~w~~D~~~~~~~~~~~-~l~v~vD~~Sr-~i~~~-~~~~~t~~~~~~~l~~~~~~~g--~p~~i~sDnG~~F~ 76 (147)
T d1cxqa_ 8 QIWQTDFTLEPRMAPRS-WLAVTVDTASS-AIVVT-QHGRVTSVAAQHHWATAIAVLG--RPKAIKTDNGSCFT 76 (147)
T ss_dssp CEEEEEEEECGGGTTSC-EEEEEEETTTC-CEEEE-EESSCCHHHHHHHHHHHHHHHC--CCSEEECCSCHHHH
T ss_pred CEEEEEEEEecCCCCeE-EEEEEEecccc-eeccc-ccCccchHHHHHHHHHHHHHhC--CCeEEEeccccccc
Confidence 47889988876443333 44466675554 44555 4566777666555555555555 47899999988764
No 52
>d2bw3a2 c.55.3.12 (A:163-609) Transposase Hermes, catalytic domain {House fly (Musca domestica) [TaxId: 7370]}
Probab=30.92 E-value=1e+02 Score=30.23 Aligned_cols=67 Identities=24% Similarity=0.287 Sum_probs=45.2
Q ss_pred eEEEEEEEeccC--ChhHHHHHHHHHHHhhc--CCCcEEEEecCchhHHHHHHHhcccCceeecHHHHHHHHHhh
Q 003242 489 IFPVAFAIVDTE--NDDSWNWFLEELRSAVS--SSRSITFVSDKQKGLMESVLKIFENAHHGYSIYHLLDNFMKN 559 (837)
Q Consensus 489 ~~plafalv~~E--~~es~~wfL~~lk~~~~--~~~p~~iisD~~~~l~~AI~~vfP~a~h~~C~~Hi~~N~~~~ 559 (837)
...|||.-+..+ +.++....+.......+ ...-..+.+|+...|..+ +++..+..|..|.+.-+...
T Consensus 44 ~~~L~~~~~~~~~~tg~~i~~~l~~~l~~~~i~~~~~~~~~~D~a~n~~~~----~~~~~~i~C~aH~Lnl~v~d 114 (447)
T d2bw3a2 44 DLILGLKSLDFERSTAENIYKKLKAIFSQFNVEDLSSIKFVTDRGANVVKS----LANNIRINCSSHLLSNVLEN 114 (447)
T ss_dssp EEEEEEEEECGGGCSHHHHHHHHHHHHHTTTCCCCTTCEEEECCCHHHHHH----TTTSEEEECHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCCCcHHHHHHHHHHHHHHcCCCcceEEEEEcCCcHhhHHH----hhccccccchhhhhhhhhHH
Confidence 355666556533 56776666666655544 334678899998877654 67888999999988765543
No 53
>d1wm3a_ d.15.1.1 (A:) SUMO-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.95 E-value=39 Score=25.14 Aligned_cols=38 Identities=16% Similarity=0.235 Sum_probs=33.9
Q ss_pred cCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 28 GGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 28 gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
.|+.--..|.++..++.|+..-|+..+++.+.+.|.|.
T Consensus 10 ~g~~v~f~vk~~t~l~kl~~~y~~~~~~~~~~~~f~fd 47 (72)
T d1wm3a_ 10 DGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFD 47 (72)
T ss_dssp TSCEEEEEECTTSCTHHHHHHHHHHHTCCTTTCEEEET
T ss_pred CCCEEEEEEcCCChHHHHHHHHHHHhCCCccceEEEEC
Confidence 46666789999999999999999999999999988883
No 54
>d2c9wb1 d.15.1.1 (B:2-104) Elongin B {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.92 E-value=39 Score=27.26 Aligned_cols=38 Identities=8% Similarity=-0.095 Sum_probs=34.6
Q ss_pred cCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 28 GGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 28 gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
|+.|--+.|+.+.|-.+|+.+|.+..|+..+...|-|.
T Consensus 9 ~k~Ti~l~v~~~~TV~~lK~~I~~~~gip~~~QrLi~~ 46 (103)
T d2c9wb1 9 HKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKD 46 (103)
T ss_dssp BTEEEEEEECTTSBHHHHHHHHHHHHCCCGGGEEEEET
T ss_pred CCEEEEEEeCCCCcHHHHHHHHHHHhCCCcccEEEEEC
Confidence 66677789999999999999999999999999999884
No 55
>d2zjrz1 g.41.8.5 (Z:2-59) Ribosomal protein L32p {Deinococcus radiodurans [TaxId: 1299]}
Probab=28.22 E-value=12 Score=27.22 Aligned_cols=41 Identities=17% Similarity=0.366 Sum_probs=24.9
Q ss_pred CCCCCCCCCCcccccccCCCccceEeCCCCCCCCcCcCCCC
Q 003242 794 PSSTRTPTTHQKRRRKILGIEHRTVTCTKCKGIGHNKLSCK 834 (837)
Q Consensus 794 P~~~r~~GRPKk~R~~~~~~~kr~~~Cs~C~~~GHNk~tC~ 834 (837)
|..+.++.|..++|............|++||+.-.-=+-|+
T Consensus 6 PKrk~SksRr~~RRsh~~l~~p~l~~C~~CG~~~lpHrvC~ 46 (58)
T d2zjrz1 6 PKKKTSKSKRDMRRSHHALTAPNLTECPQCHGKKLSHHICP 46 (58)
T ss_dssp CSSCCCTTHHHHHTTTCCCCCCCCEECTTTCCEECTTBCCT
T ss_pred CCCccCcccchhhhhhhhhcCCceeECCCCCCCccceeeCC
Confidence 44444566666666544444556788999998653334554
No 56
>d1uh6a_ d.15.1.1 (A:) Ubiquitin-like protein 5, ubl5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=27.78 E-value=30 Score=27.81 Aligned_cols=38 Identities=24% Similarity=0.308 Sum_probs=36.0
Q ss_pred ecCceEEEEeCCCCChHHHHHHHHHHhCCCCcceEEEE
Q 003242 27 DGGEANAVAINPETHFGDLKLKLAELLNLEYKSLSVKY 64 (837)
Q Consensus 27 ~gg~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~y 64 (837)
.-|++--|.|+.+.+=.+|+.+|++..++..+...|.|
T Consensus 36 ~~Gk~~~v~V~p~~TV~~LK~~I~~~~gip~~~qrLi~ 73 (100)
T d1uh6a_ 36 RLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKK 73 (100)
T ss_dssp SSSSCEEEEEETTSBHHHHHHHHHHHHCCCGGGCEEEE
T ss_pred CCCCEEEEEECCcChHHHHHHHHHHHHCCCcceEEEEE
Confidence 46999999999999999999999999999999999999
No 57
>d1we6a_ d.15.1.1 (A:) Splicing factor 3 subunit 1, C-terminal domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.62 E-value=43 Score=27.32 Aligned_cols=38 Identities=16% Similarity=0.240 Sum_probs=34.4
Q ss_pred cCceEEEEeCC-CCChHHHHHHHHHHhCCCCcceEEEEe
Q 003242 28 GGEANAVAINP-ETHFGDLKLKLAELLNLEYKSLSVKYF 65 (837)
Q Consensus 28 gg~~~~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~y~ 65 (837)
.|++.-+.|.. +.+-.+|+.+|.+..+++.+...|.|.
T Consensus 39 ~G~~i~l~v~~~sdtV~~lK~~I~~~~gip~~~QrLi~~ 77 (111)
T d1we6a_ 39 DGQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGK 77 (111)
T ss_dssp SSCCEEEEESCSSSBHHHHHHHHHHHTTCCTTTSEEECS
T ss_pred CCeEEEEEecCCccHHHHHHHHHHHHHCCCccceEEEEe
Confidence 48899999975 899999999999999999998899985
No 58
>d1px9a_ g.3.7.2 (A:) Ergtoxin (HERG specific toxin CnErg1) {Scorpion (Centruroides noxius) [TaxId: 6878]}
Probab=20.61 E-value=3.9 Score=26.70 Aligned_cols=11 Identities=55% Similarity=1.156 Sum_probs=9.5
Q ss_pred CCCCCcCcCCC
Q 003242 823 CKGIGHNKLSC 833 (837)
Q Consensus 823 C~~~GHNk~tC 833 (837)
|+..|||..||
T Consensus 24 ckkagh~~gtc 34 (42)
T d1px9a_ 24 CKNAGHNGGTC 34 (42)
T ss_dssp HHHHTSCCEEE
T ss_pred HHhcCCCCceE
Confidence 67889999888
Done!