Query 003243
Match_columns 837
No_of_seqs 358 out of 1673
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 18:26:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003243.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003243hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 100.0 4.9E-46 1.7E-50 450.6 43.7 480 1-794 81-572 (802)
2 2z86_A Chondroitin synthase; G 99.2 4E-11 1.4E-15 140.6 14.2 69 288-367 149-217 (625)
3 1xhb_A Polypeptide N-acetylgal 99.2 6.8E-11 2.3E-15 134.1 15.0 49 65-116 25-73 (472)
4 2d7i_A Polypeptide N-acetylgal 99.1 3.3E-10 1.1E-14 132.4 13.2 48 66-116 109-156 (570)
5 2ffu_A Ppgalnact-2, polypeptid 99.1 4.9E-10 1.7E-14 128.4 12.1 49 65-116 62-110 (501)
6 1qg8_A Protein (spore coat pol 99.0 3.1E-10 1.1E-14 116.8 7.6 94 304-410 75-170 (255)
7 3bcv_A Putative glycosyltransf 99.0 6.8E-09 2.3E-13 105.6 15.9 44 67-116 3-46 (240)
8 2z86_A Chondroitin synthase; G 98.9 9.9E-09 3.4E-13 120.3 13.5 106 287-410 430-535 (625)
9 3ckj_A Putative uncharacterize 98.4 4.5E-07 1.5E-11 98.3 8.6 53 304-362 118-170 (329)
10 4fix_A UDP-galactofuranosyl tr 98.4 1.1E-06 3.7E-11 104.5 11.6 64 288-360 241-304 (657)
11 3l7i_A Teichoic acid biosynthe 98.2 2.4E-07 8.1E-12 111.1 0.0 60 288-360 59-118 (729)
12 2fy7_A Beta-1,4-galactosyltran 97.6 4.8E-05 1.6E-09 81.5 5.2 53 538-590 201-263 (287)
13 3f1y_A Mannosyl-3-phosphoglyce 97.2 0.00062 2.1E-08 75.9 9.3 51 304-360 166-216 (387)
14 2nxv_A ATP synthase subunits r 94.9 0.013 4.4E-07 60.6 3.5 50 305-359 62-113 (249)
15 2bo4_A Mannosylglycerate synth 50.0 21 0.00072 39.6 6.4 52 304-357 75-126 (397)
16 1fo8_A Alpha-1,3-mannosyl-glyc 44.6 20 0.0007 39.0 5.1 43 69-116 2-44 (343)
17 3q80_A 2-C-methyl-D-erythritol 22.5 73 0.0025 32.2 4.6 28 322-349 100-127 (231)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=100.00 E-value=4.9e-46 Score=450.63 Aligned_cols=480 Identities=22% Similarity=0.337 Sum_probs=367.5
Q ss_pred CeeecccC-CCc----hhHHHHHHHHHHHHHHHHHHHhhccccccccccCChhhHHhhhCCCCCCCCCCCCCCCcccEEE
Q 003243 1 MEWRITNP-NED----AIWLWGMSVVCELWFAFSWVLDQLPKFCPVNRFADLDVLKEKFETPNPSNPAGKSDLPGVDIFV 75 (837)
Q Consensus 1 ~~~R~~~~-~~~----~~w~w~~~~~~E~~f~~~w~l~q~~~w~Pv~r~~~~~rL~~~~~~~~~~~~~~~~~lP~vDvfV 75 (837)
++||++.. +.. ..++|++++++|+++.+.|++.++.+|+|..|...++. .++++|.|+|+|
T Consensus 81 ~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--------------~~~~~P~VSViI 146 (802)
T 4hg6_A 81 WFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--------------QPEELPTVDILV 146 (802)
T ss_dssp HHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--------------CTTTCCCEEEEE
T ss_pred HHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--------------CccCCCcEEEEE
Confidence 36888765 322 34688999999999999999999999999999876532 145799999999
Q ss_pred eCCCCCCCChHhHHHHHHHHHhccCCCCccEEEEcCCCCchhhHHHHHHHHhhhhhchhhhhhccCCCCCcccccCCCCC
Q 003243 76 STADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFASIWVPFCRKHDIEPRNPESYFGLKRD 155 (837)
Q Consensus 76 ~tadp~~EPp~~v~nTvlS~la~DYP~~kl~vYvsDDG~s~lt~~al~Ea~~Fa~~WvPfCkk~~i~~r~P~~yF~~~~~ 155 (837)
||+ +|++.++.+|+.|+++.|||.+|+.|+|.|||.+.-|.+.
T Consensus 147 Pty---Ne~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~---------------------------------- 189 (802)
T 4hg6_A 147 PSY---NEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS---------------------------------- 189 (802)
T ss_dssp ECT---TCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC----------------------------------
T ss_pred EEC---CCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc----------------------------------
Confidence 998 8999999999999999999999999999999999854421
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccHHHHHHHHHhhhcCCCccccccccccccccccCCCC
Q 003243 156 PYKNKVRPDFVRDRRRVKHEYDEFKVRVNALSDSIRRRSDAYNTREEVKALKRWRENKDDEIREIPKITKATWMADGTHW 235 (837)
Q Consensus 156 ~~~~~~~~~f~~e~~~ik~~Ye~~k~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~w 235 (837)
.+++..+ ++++-...++ .+.+
T Consensus 190 -----~d~~i~~-------~~~~~~~~l~--------------------~~~~--------------------------- 210 (802)
T 4hg6_A 190 -----PDPELAQ-------KAQERRRELQ--------------------QLCR--------------------------- 210 (802)
T ss_dssp -----SSHHHHH-------HHHHHHHHHH--------------------HHHH---------------------------
T ss_pred -----CCHHHHH-------HHHhhhHHHH--------------------HHHH---------------------------
Confidence 0111111 1111111111 1100
Q ss_pred CCcccCCCCCCCCCCcchheeeccCCCCCCCCCCCcccCCcccccccccCCCcEEEEEecCCCCCCCCCchhHHHHHHHh
Q 003243 236 PGTWTIPAPEHSRGDHASIIQVMLNPPSDEPLKGTAADMNSMDLSEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRA 315 (837)
Q Consensus 236 ~g~~~~~~~~~~~~dh~~iiqv~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~lvYvsRekrpg~~h~~KAGAlNallrv 315 (837)
+ ..+.|+.|++ +++.||||+|.+++.
T Consensus 211 -------------------------------------~-------------~~v~~i~~~~----~~~GKa~alN~gl~~ 236 (802)
T 4hg6_A 211 -------------------------------------E-------------LGVVYSTRER----NEHAKAGNMSAALER 236 (802)
T ss_dssp -------------------------------------H-------------HTCEEEECSS----CCSHHHHHHHHHHHH
T ss_pred -------------------------------------h-------------cCcEEEEecC----CCCcchHHHHHHHHh
Confidence 0 1256778876 456899999999975
Q ss_pred hcccCCCCEEEeecCCCCCCCchHHHHHHHhhhcCCCCcEEEEccCccccCCCcc-------chhhhHHHHHHhHHHHHH
Q 003243 316 SAIMSNGPFILNLDCDHYIFYSPALREGMCYMMDGEGDRICYVQFPQRFEGIDPS-------DRYANHNTVFFDANMRAL 388 (837)
Q Consensus 316 S~~~sn~p~il~lD~D~~~n~p~~lr~amc~f~d~~~~~vafVQ~PQ~F~n~~~~-------d~~~~~~~~ff~~~~~G~ 388 (837)
++++||+.+|||+++ +|++|++.+.+|.+ ++++++||+|+.+.|.+.. +.+.++...|+.....+.
T Consensus 237 ----a~gd~Il~lDaD~~~-~pd~L~~lv~~~~~--dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (802)
T 4hg6_A 237 ----LKGELVVVFDADHVP-SRDFLARTVGYFVE--DPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGL 309 (802)
T ss_dssp ----CCCSEEEECCTTEEE-CTTHHHHHHHHHHH--SSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHH
T ss_pred ----cCCCEEEEECCCCCc-ChHHHHHHHHHHhc--CCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhH
Confidence 489999999999997 69999999999975 4899999999999987632 234566788999999999
Q ss_pred hhcCCCccccchhhhcHHhhccCCCCCcccccCcccccccccchhhccccccccCCCCCcCccchhhcccccccCCchhh
Q 003243 389 DGLQGPVYVGTGCLFRRTALYGFEPPLSIERTNWLSRFFPRKRKIATARSTAEVAPEENYDDGEMNIALIPKKFGNSSML 468 (837)
Q Consensus 389 dg~~gp~y~GTg~~~RR~AL~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~s~~~ 468 (837)
+.+++++++|+++++||+++..
T Consensus 310 ~~~~~~~~~G~~~~~Rr~al~~---------------------------------------------------------- 331 (802)
T 4hg6_A 310 DRWGGAFFCGSAAVLRRRALDE---------------------------------------------------------- 331 (802)
T ss_dssp HHTTCCCCCSSSEEEEHHHHHH----------------------------------------------------------
T ss_pred hhcCCceecccchhhhHHHHHH----------------------------------------------------------
Confidence 9999999999999999999964
Q ss_pred hhhHHHHHHcCCCCCCCCCccCCCCCCCCCCCCCCCCcchhhhhhhccccccccccccccccCcccCcccchHHHHHHHH
Q 003243 469 LDSIQVAAFQGQPLADHPSVKNGRPPGSLIAPREPLVPSTVGEAINVISCWYEDKTEWGDSVGWIYGSVTEDVVTGYRMH 548 (837)
Q Consensus 469 ~~s~~~~~~~g~~~~~~~~~~~~~~~G~~~~~~~~~~~~~l~~a~~v~sC~Ye~~T~WGkevGw~~~slTED~~tg~rL~ 548 (837)
+ | ||++++++||.+++.+++
T Consensus 332 --------v-----------------G-----------------------------------gf~~~~~~ED~~l~~rl~ 351 (802)
T 4hg6_A 332 --------A-----------------G-----------------------------------GFAGETITEDAETALEIH 351 (802)
T ss_dssp --------H-----------------T-----------------------------------TCCCSSSSHHHHHHHHHH
T ss_pred --------c-----------------C-----------------------------------CcCCCCcchHHHHHHHHH
Confidence 1 2 778888999999999999
Q ss_pred hCCceEEEeecCCccccccCCCCHHHHHHhhhhhccchhHHHhhhccccccCCccccchhHHHHhHHHHHhHHHHHHHHH
Q 003243 549 DRGWRSVYCVTKRDAFHGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLGSSRLKLLQRIAYLNVGIYPFTSIFLIVYC 628 (837)
Q Consensus 549 ~~GWrsvY~~~~~~~~~G~aP~tl~~~l~QR~RWa~G~lQil~~k~~pl~~~~~L~l~qrl~yl~~~l~~l~sl~~l~y~ 628 (837)
++||++.|+++. .+++++|+|+.++++||.||++|.+|+++ +++|++ .+++++.+|+.|+...++++.+++.++++
T Consensus 352 ~~G~ri~~~~~~--~~~~~~p~t~~~~~~Qr~RW~~G~~q~l~-~~~pl~-~~~l~~~~rl~~l~~~~~~~~~~~~li~l 427 (802)
T 4hg6_A 352 SRGWKSLYIDRA--MIAGLQPETFASFIQQRGRWATGMMQMLL-LKNPLF-RRGLGIAQRLCYLNSMSFWFFPLVRMMFL 427 (802)
T ss_dssp TTTCCEEECCCC--CEEECCCCSHHHHHHHHHHHHHHHHHHHH-HSCTTS-CSSCCHHHHHHHHHHHHHTTHHHHHHHHH
T ss_pred HcCCeEEEecCC--EEEecCCCCHHHHHHHHHHHHccHHHHHH-HhCccc-cCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999854 67899999999999999999999999997 457777 68899999999999999999999899999
Q ss_pred HHHHHHHHhCcchhhhchHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHcCC
Q 003243 629 FLPALSLFSGQFIVQTLNVTFLVYLFAITVTLSLLAVLEVKWSGIDLEEWWRNEQFWLIGGTSAHLVAVLQGLLKVIAGI 708 (837)
Q Consensus 629 llP~l~Ll~G~~~~p~~~~~~~i~~lp~~l~~~~~~lle~~w~G~s~~~wwr~qr~w~i~~~~~~l~a~i~allk~Lg~~ 708 (837)
++|++++++++.++......++.+++|+++...+... ... +.....|| ++.++.+ ..++.+...+...++++
T Consensus 428 l~p~~~ll~~~~~~~~~~~~~~~~~lp~~l~~~~~~~--~~~-~~~r~~~~-~~l~~~~----~~~~~~~a~l~~l~~~~ 499 (802)
T 4hg6_A 428 VAPLIYLFFGIEIFVATFEEVLAYMPGYLAVSFLVQN--ALF-ARQRWPLV-SEVYEVA----QAPYLARAIVTTLLRPR 499 (802)
T ss_dssp HHHHHHHHHCCCCSCCCHHHHHHHHHHHHHHHHHHHH--HHH-TTTSCTTH-HHHHHHH----HHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHhHHHhhcCHHHHHHHHHHHHHHHHHHHH--HHh-cCcHHHHH-HHHHHHH----HHHHHHHHHHHHHhCCC
Confidence 9999999999999887777777777777654433211 112 21111233 2333322 22222222233334568
Q ss_pred CcceEeCCCCCCCCccccccccEEeecccchhHHHHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhHHHH
Q 003243 709 EISFTLTSKSVGEDVDDEFADLYIFKWTSLMIPPLTIIMVNLIAIAVAVSRTIYSAEPQWSQLVGGVFFSFWVLAHLYPF 788 (837)
Q Consensus 709 ~~~F~VT~K~~~~~~~~~~~~~~~f~~s~l~iP~~~Llllnl~aiv~gi~r~~~~~~~~~~~~~~~l~~~~wvv~~l~P~ 788 (837)
+.+|+||+|+...+ +.+ + +..+.|++++++++++++++|+++...... ...+.+++++|+++|++.+
T Consensus 500 ~~~f~VT~Kg~~~~--~~~-----~--~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~w~~~~l~~l 566 (802)
T 4hg6_A 500 SARFAVTAKDETLS--ENY-----I--SPIYRPLLFTFLLCLSGVLATLVRWVAFPG----DRSVLLVVGGWAVLNVLLV 566 (802)
T ss_dssp CCCCCCCCCCCCCS--SCC-----B--CTTCHHHHHHHHHHHHHHHHHHHHHHHCGG----GHHHHHHHHHHHHHHHHHH
T ss_pred CCcceECCCCcccc--ccc-----h--hhHHHHHHHHHHHHHHHHHHHHHHHhccCC----ccchhhhhhHHHHHHHHHH
Confidence 89999999997542 221 1 246789999999999999999999876432 2334578899999999998
Q ss_pred HHHHhh
Q 003243 789 AKGLMG 794 (837)
Q Consensus 789 ~~gL~~ 794 (837)
.-++..
T Consensus 567 ~~~~~~ 572 (802)
T 4hg6_A 567 GFALRA 572 (802)
T ss_dssp HHHHTT
T ss_pred HHHHHH
Confidence 887764
No 2
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.23 E-value=4e-11 Score=140.59 Aligned_cols=69 Identities=16% Similarity=0.167 Sum_probs=54.9
Q ss_pred cEEEEEecCCCCCCCCCchhHHHHHHHhhcccCCCCEEEeecCCCCCCCchHHHHHHHhhhcCCCCcEEEEccCccccCC
Q 003243 288 MLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIFYSPALREGMCYMMDGEGDRICYVQFPQRFEGI 367 (837)
Q Consensus 288 ~lvYvsRekrpg~~h~~KAGAlNallrvS~~~sn~p~il~lD~D~~~n~p~~lr~amc~f~d~~~~~vafVQ~PQ~F~n~ 367 (837)
.+.|+.+++. .+.||+|+|.+++. +.++||+.+|+|+++ +|++|.+++.+|.. ++.+++|+..+.+.+.
T Consensus 149 ~i~~i~~~~~----~~g~~~a~N~g~~~----a~g~~v~~lD~D~~~-~~~~l~~~~~~~~~--~~~~~~~g~~~~~~~~ 217 (625)
T 2z86_A 149 NIKYVRQKDY----GYQLCAVRNLGLRA----AKYNYVAILDCDMAP-NPLWVQSYMELLAV--DDNVALIGPRKYIDTS 217 (625)
T ss_dssp CEEEEEECCC----SCCHHHHHHHHHHH----CCSSEEEEECTTEEE-CTTHHHHHHHHHHH--CTTEEEECCEEEECCT
T ss_pred CeEEEEeCCC----CcchhHHHHHHHHh----CCcCEEEEECCCCCC-CHHHHHHHHHHHhc--CCceEEEEeeeeccCc
Confidence 4677776542 23699999988874 489999999999997 69999999999986 4788888887666543
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.22 E-value=6.8e-11 Score=134.07 Aligned_cols=49 Identities=14% Similarity=0.112 Sum_probs=43.9
Q ss_pred CCCCCcccEEEeCCCCCCCChHhHHHHHHHHHhccCCCCccEEEEcCCCCch
Q 003243 65 KSDLPGVDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGAL 116 (837)
Q Consensus 65 ~~~lP~vDvfV~tadp~~EPp~~v~nTvlS~la~DYP~~kl~vYvsDDG~s~ 116 (837)
++++|.|.|+|+|+ +|+...+..|+-|+++.+||..+.-|.|.|||.+.
T Consensus 25 ~~~~p~vSVIIp~y---N~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d 73 (472)
T 1xhb_A 25 PDNLPTTSVVIVFH---NEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASER 73 (472)
T ss_dssp CSCCCCEEEEEEES---SCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCC
T ss_pred CcCCCCeEEEEEeC---CCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCc
Confidence 35799999999998 78878899999999999999877899999998774
No 4
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.09 E-value=3.3e-10 Score=132.36 Aligned_cols=48 Identities=21% Similarity=0.149 Sum_probs=43.0
Q ss_pred CCCCcccEEEeCCCCCCCChHhHHHHHHHHHhccCCCCccEEEEcCCCCch
Q 003243 66 SDLPGVDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGAL 116 (837)
Q Consensus 66 ~~lP~vDvfV~tadp~~EPp~~v~nTvlS~la~DYP~~kl~vYvsDDG~s~ 116 (837)
+++|.|.|+|+|+ +|+...+..||-|+++..||....-|.|.|||.+.
T Consensus 109 ~~~P~vSVIIp~y---Ne~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D 156 (570)
T 2d7i_A 109 ETLPNTSIIIPFH---NEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDR 156 (570)
T ss_dssp SSCCCEEEEEEES---SCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCC
T ss_pred CCCCCeEEEEEEC---CCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCc
Confidence 5699999999998 78778899999999999999767799999998775
No 5
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.05 E-value=4.9e-10 Score=128.35 Aligned_cols=49 Identities=20% Similarity=0.247 Sum_probs=43.2
Q ss_pred CCCCCcccEEEeCCCCCCCChHhHHHHHHHHHhccCCCCccEEEEcCCCCch
Q 003243 65 KSDLPGVDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGAL 116 (837)
Q Consensus 65 ~~~lP~vDvfV~tadp~~EPp~~v~nTvlS~la~DYP~~kl~vYvsDDG~s~ 116 (837)
++++|.|.|+|+|+ +|+...+..|+-|+++..||....-|.|.|||.+.
T Consensus 62 ~~~~p~vSVIIp~y---N~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D 110 (501)
T 2ffu_A 62 RVDLPATSVVITFH---NEARSALLRTVVSVLKKSPPHLIKEIILVDDYSND 110 (501)
T ss_dssp CSSCCCEEEEEEES---SCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSC
T ss_pred CcCCCCEEEEEEeC---cCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCc
Confidence 35799999999998 78876899999999999999777899999998765
No 6
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=99.01 E-value=3.1e-10 Score=116.77 Aligned_cols=94 Identities=9% Similarity=-0.028 Sum_probs=62.9
Q ss_pred CchhHHHHHHHhhcccCCCCEEEeecCCCCCCCchHHHHHHHhhhcCCCCcEEEEccCcccc--CCCccchhhhHHHHHH
Q 003243 304 KKAGAMNALVRASAIMSNGPFILNLDCDHYIFYSPALREGMCYMMDGEGDRICYVQFPQRFE--GIDPSDRYANHNTVFF 381 (837)
Q Consensus 304 ~KAGAlNallrvS~~~sn~p~il~lD~D~~~n~p~~lr~amc~f~d~~~~~vafVQ~PQ~F~--n~~~~d~~~~~~~~ff 381 (837)
.+++|+|.+++. ++++||+.+|+|.++ .|+.|.+.+..|.. .+++++|.+...+. +.+.. ..........
T Consensus 75 G~~~a~N~gi~~----a~g~~i~~lD~Dd~~-~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~ 146 (255)
T 1qg8_A 75 RYAALINQAIEM----AEGEYITYATDDNIY-MPDRLLKMVRELDT--HPEKAVIYSASKTYHLNENRD-IVKETVRPAA 146 (255)
T ss_dssp HHHHHHHHHHHH----CCCSEEEEEETTEEE-CTTHHHHHHHHHHH--CTTCCEEEEEEEEEEEC---C-EEEEEEECCC
T ss_pred CHHHHHHHHHHH----cCCCEEEEeCCCCcc-ChHHHHHHHHHHHh--CCCceEEEeceEEEEeCCCCc-chhhccCchH
Confidence 489999999874 589999999999997 69999999999986 46788888876654 32211 1100000000
Q ss_pred hHHHHHHhhcCCCccccchhhhcHHhhcc
Q 003243 382 DANMRALDGLQGPVYVGTGCLFRRTALYG 410 (837)
Q Consensus 382 ~~~~~G~dg~~gp~y~GTg~~~RR~AL~g 410 (837)
...........|++.++||+++..
T Consensus 147 -----~~~~~~~~~~~~~~~~~rr~~~~~ 170 (255)
T 1qg8_A 147 -----QVTWNAPCAIDHCSVMHRYSVLEK 170 (255)
T ss_dssp -----SCBSCCTTTSCGGGEEEETHHHHH
T ss_pred -----HHHHhhcCCCccceEEEEHHHHHh
Confidence 011133445678889999999864
No 7
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=98.98 E-value=6.8e-09 Score=105.55 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=38.2
Q ss_pred CCCcccEEEeCCCCCCCChHhHHHHHHHHHhccCCCCccEEEEcCCCCch
Q 003243 67 DLPGVDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGAL 116 (837)
Q Consensus 67 ~lP~vDvfV~tadp~~EPp~~v~nTvlS~la~DYP~~kl~vYvsDDG~s~ 116 (837)
..|.|.|+|+|+ +++ ..+..++-|+++.+|| .+-|.|.|||.+.
T Consensus 3 ~~p~vsViIp~y---n~~-~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d 46 (240)
T 3bcv_A 3 LIPKVSVIVPIY---NVE-KYLDQCVQALLAQTLS--DIEIILIDDESPD 46 (240)
T ss_dssp CCCSEEEEEEES---SCT-TTHHHHHHHHHTCSSS--SEEEEEEECCCSS
T ss_pred CCCcEEEEEecC---CCH-HHHHHHHHHHHhCcCC--CeEEEEEECCCCc
Confidence 468899999998 554 6788999999999998 6889999999776
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=98.86 E-value=9.9e-09 Score=120.27 Aligned_cols=106 Identities=18% Similarity=0.151 Sum_probs=70.2
Q ss_pred CcEEEEEecCCCCCCCCCchhHHHHHHHhhcccCCCCEEEeecCCCCCCCchHHHHHHHhhhcCCCCcEEEEccCccccC
Q 003243 287 PMLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIFYSPALREGMCYMMDGEGDRICYVQFPQRFEG 366 (837)
Q Consensus 287 P~lvYvsRekrpg~~h~~KAGAlNallrvS~~~sn~p~il~lD~D~~~n~p~~lr~amc~f~d~~~~~vafVQ~PQ~F~n 366 (837)
|++.+++ ++.. .+++|+|.+++. ++|+||+.+|+|.+. .|+.|.+.+..|.. ++++++|.+...+.+
T Consensus 430 ~~i~~~~-~~n~-----G~~~a~n~g~~~----a~g~~i~~ld~D~~~-~~~~l~~~~~~~~~--~~~~~~v~~~~~~~~ 496 (625)
T 2z86_A 430 PRVRFIS-QKNK-----GIGSASNTAVRL----CRGFYIGQLDSDDFL-EPDAVELCLDEFRK--DLSLACVYTTNRNID 496 (625)
T ss_dssp TTEEEEE-ECCC-----CHHHHHHHHHHH----CCSSEEEECCTTCEE-CTTHHHHHHHHHHH--CTTCSEEEEEEEEEC
T ss_pred CcEEEEe-CCCC-----CHHHHHHHHHHh----cCCCEEEEECCCccc-ChhHHHHHHHHHHh--CCCeeEEEeeeEEEC
Confidence 3466665 4333 499999999874 589999999999997 79999999988865 477888888766554
Q ss_pred CCccchhhhHHHHHHhHHHHHHhhcCCCccccchhhhcHHhhcc
Q 003243 367 IDPSDRYANHNTVFFDANMRALDGLQGPVYVGTGCLFRRTALYG 410 (837)
Q Consensus 367 ~~~~d~~~~~~~~ff~~~~~G~dg~~gp~y~GTg~~~RR~AL~g 410 (837)
.+............+ ..+.+....++|++.++||+++..
T Consensus 497 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~r~~~~~ 535 (625)
T 2z86_A 497 REGNLISNGYNWPIY-----SREKLTSAMICHHFRMFTARAWNL 535 (625)
T ss_dssp TTSCEEEECCCCSSC-----CHHHHTTSCCCCSCEEEEHHHHTT
T ss_pred CCCCEeccCcccccC-----CHHHHhhcccCCceEEEEHHHHHH
Confidence 332211100000000 012234556788889999998854
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=98.39 E-value=4.5e-07 Score=98.35 Aligned_cols=53 Identities=19% Similarity=0.091 Sum_probs=43.1
Q ss_pred CchhHHHHHHHhhcccCCCCEEEeecCCCCCCCchHHHHHHHhhhcCCCCcEEEEccCc
Q 003243 304 KKAGAMNALVRASAIMSNGPFILNLDCDHYIFYSPALREGMCYMMDGEGDRICYVQFPQ 362 (837)
Q Consensus 304 ~KAGAlNallrvS~~~sn~p~il~lD~D~~~n~p~~lr~amc~f~d~~~~~vafVQ~PQ 362 (837)
.|++|+|.+++. ++++||+.+|+|....+|+.|.+.+..|.. ++++++|+...
T Consensus 118 G~~~a~n~g~~~----a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~--~~~~~~v~g~~ 170 (329)
T 3ckj_A 118 GKGEALWRSLAA----SRGDIVVFVDSDLINPHPMFVPWLVGPLLT--GDGVHLVKSFY 170 (329)
T ss_dssp SHHHHHHHHHHH----CCCSEEEECCTTEESCCTTHHHHHHHHHHS--CSSCCEEEEEE
T ss_pred CHHHHHHHHHHh----CCCCEEEEECCCCCCcChHHHHHHHHHHHh--CCCccEEEEEe
Confidence 499999999874 579999999999983269999999998765 36777887743
No 10
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=98.36 E-value=1.1e-06 Score=104.49 Aligned_cols=64 Identities=13% Similarity=0.035 Sum_probs=47.6
Q ss_pred cEEEEEecCCCCCCCCCchhHHHHHHHhhcccCCCCEEEeecCCCCCCCchHHHHHHHhhhcCCCCcEEEEcc
Q 003243 288 MLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIFYSPALREGMCYMMDGEGDRICYVQF 360 (837)
Q Consensus 288 ~lvYvsRekrpg~~h~~KAGAlNallrvS~~~sn~p~il~lD~D~~~n~p~~lr~amc~f~d~~~~~vafVQ~ 360 (837)
++.|+..+ ..| .|||.|.+++...-.++++||+.+|.|.++ .|+.|.+.+.++.. .++++.|+.
T Consensus 241 ~I~vI~~~-N~G-----~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~-~pd~L~~ll~~l~~--~~~~~~vg~ 304 (657)
T 4fix_A 241 RLSIHDQP-NLG-----GSGGYSRVMYEALKNTDCQQILFMDDDIRL-EPDSILRVLAMHRF--AKAPMLVGG 304 (657)
T ss_dssp GEEEEECC-CCH-----HHHHHHHHHHHHHHHCCCSEEEEECSSEEE-CTHHHHHHHHHHHH--BSSCCEEEE
T ss_pred CEEEEECC-CCC-----HHHHHHHHHHHHHhcCCCCEEEEECCCCcc-ChhHHHHHHHHHHh--CCCcEEEEe
Confidence 46666544 333 799999888754222378999999999997 69999999999976 355666653
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=98.17 E-value=2.4e-07 Score=111.08 Aligned_cols=60 Identities=17% Similarity=0.204 Sum_probs=0.0
Q ss_pred cEEEEEecCCCCCCCCCchhHHHHHHHhhcccCCCCEEEeecCCCCCCCchHHHHHHHhhhcCCCCcEEEEcc
Q 003243 288 MLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIFYSPALREGMCYMMDGEGDRICYVQF 360 (837)
Q Consensus 288 ~lvYvsRekrpg~~h~~KAGAlNallrvS~~~sn~p~il~lD~D~~~n~p~~lr~amc~f~d~~~~~vafVQ~ 360 (837)
++.|+..++..| +++|.|.+++. ++|+||+.+|+|.++ .|+.|.+.+..+.+ .++++...
T Consensus 59 ~i~~i~~~~n~G-----~~~arN~gi~~----A~gdyI~flD~Dd~~-~p~~l~~l~~~l~~---~d~v~~~~ 118 (729)
T 3l7i_A 59 NIRFIDLDENSG-----HAHARNIALEE----VETPYFMFLDADDEL-ASYAITFYLEKFNN---TDGLIAPI 118 (729)
T ss_dssp -------------------------------------------------------------------------
T ss_pred CEEEEECCCCCC-----HHHHHHHHHHh----ccCCEEEEECCCCCC-ChhHHHHHHHHhcC---CCEEEEee
Confidence 455666555444 79999998863 589999999999997 69999999998874 44544443
No 12
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=97.57 E-value=4.8e-05 Score=81.52 Aligned_cols=53 Identities=13% Similarity=-0.003 Sum_probs=40.2
Q ss_pred cchHHHHHHHHhCCceEEEeecCCccc----------cccCCCCHHHHHHhhhhhccchhHHH
Q 003243 538 TEDVVTGYRMHDRGWRSVYCVTKRDAF----------HGTAPINLTDRLHQVLRWATGSVEIF 590 (837)
Q Consensus 538 TED~~tg~rL~~~GWrsvY~~~~~~~~----------~G~aP~tl~~~l~QR~RWa~G~lQil 590 (837)
.||.++..|++.+||++.+.++....+ ....|+.+..+.+||.||+++.+..+
T Consensus 201 ~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~~~~~~n~~~~~~l~~~~~~~~~~Gl~~~ 263 (287)
T 2fy7_A 201 GEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSL 263 (287)
T ss_dssp CHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---------CCCCCCCHHHHHHHTTTSSGGGC
T ss_pred cchHHHHHHHHHcCCeEEecCcccceeEEEecCCCcccCCCHHHHHHHhhcccEEcCCCcccC
Confidence 499999999999999987433211111 23578999999999999999999876
No 13
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=97.25 E-value=0.00062 Score=75.92 Aligned_cols=51 Identities=18% Similarity=0.220 Sum_probs=41.6
Q ss_pred CchhHHHHHHHhhcccCCCCEEEeecCCCCCCCchHHHHHHHhhhcCCCCcEEEEcc
Q 003243 304 KKAGAMNALVRASAIMSNGPFILNLDCDHYIFYSPALREGMCYMMDGEGDRICYVQF 360 (837)
Q Consensus 304 ~KAGAlNallrvS~~~sn~p~il~lD~D~~~n~p~~lr~amc~f~d~~~~~vafVQ~ 360 (837)
.|++|+|.+++. ++++||+.+|||....+|+.|.+.+..+.+ ++++++|..
T Consensus 166 G~g~A~n~G~~~----A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~--~p~~d~v~G 216 (387)
T 3f1y_A 166 GKGDAMWRALSV----TRGDLVLYIDADTRDFRPQLAYGVLGPVLE--VPGVRFVKA 216 (387)
T ss_dssp SHHHHHHHHTTT----CCSSEEEECCTTCSSCCTHHHHTTHHHHHH--STTCCEEEE
T ss_pred CHHHHHHHHHHh----cCCCEEEEEcCCCCcCCHHHHHHHHHHHHH--CCCceEEEE
Confidence 399999999864 579999999999993269999999998876 356666665
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=94.94 E-value=0.013 Score=60.63 Aligned_cols=50 Identities=4% Similarity=-0.007 Sum_probs=39.9
Q ss_pred chhHHHHHHHhhcccCCCCEEEeecCCCCCCCchHHHHHHHhhhcC--CCCcEEEEc
Q 003243 305 KAGAMNALVRASAIMSNGPFILNLDCDHYIFYSPALREGMCYMMDG--EGDRICYVQ 359 (837)
Q Consensus 305 KAGAlNallrvS~~~sn~p~il~lD~D~~~n~p~~lr~amc~f~d~--~~~~vafVQ 359 (837)
.|.|+|.+++. +.|+|++.+|+|.++ +|++|.+.+.++... .++++|.|-
T Consensus 62 ~a~a~N~Gi~~----A~g~yl~fln~D~~~-~~~~l~~l~~~~~~~~~~~~~vg~vg 113 (249)
T 2nxv_A 62 GFSWHKQMLPR----CKGRYVIFCHEDVEL-VDRGYDDLVAAIEALEEADPKWLVAG 113 (249)
T ss_dssp TTTHHHHHGGG----CCSSEEEEEETTEEC-SSCCHHHHHHHHHHHHHHCTTEEEEE
T ss_pred HHHHHHHHHHh----cCCCEEEEECCCccc-CccHHHHHHHHHHhcccCCCCeeEEe
Confidence 48999999874 479999999999997 799999999888641 026777663
No 15
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=49.96 E-value=21 Score=39.56 Aligned_cols=52 Identities=17% Similarity=-0.026 Sum_probs=36.9
Q ss_pred CchhHHHHHHHhhcccCCCCEEEeecCCCCCCCchHHHHHHHhhhcCCCCcEEE
Q 003243 304 KKAGAMNALVRASAIMSNGPFILNLDCDHYIFYSPALREGMCYMMDGEGDRICY 357 (837)
Q Consensus 304 ~KAGAlNallrvS~~~sn~p~il~lD~D~~~n~p~~lr~amc~f~d~~~~~vaf 357 (837)
-|++|||++++..-...+|++|+.+|||....+|+.+.+.+..+.+ |-++..
T Consensus 75 GkG~Al~~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~--g~D~V~ 126 (397)
T 2bo4_A 75 GKGDGMNTALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF--GYGLVR 126 (397)
T ss_dssp SHHHHHHHHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT--TCSEEE
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc--CCCEEE
Confidence 4999999998321003589999999999962369999888776644 344443
No 16
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=44.61 E-value=20 Score=38.95 Aligned_cols=43 Identities=19% Similarity=0.168 Sum_probs=35.7
Q ss_pred CcccEEEeCCCCCCCChHhHHHHHHHHHhccCCCCccEEEEcCCCCch
Q 003243 69 PGVDIFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGAL 116 (837)
Q Consensus 69 P~vDvfV~tadp~~EPp~~v~nTvlS~la~DYP~~kl~vYvsDDG~s~ 116 (837)
+-+=|.|.|+ +-| . +..++-|++...++.++.-++|||||...
T Consensus 2 ~~~pViI~~y---NRp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~ 44 (343)
T 1fo8_A 2 AVIPILVIAC---DRS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHE 44 (343)
T ss_dssp CCCCEEEEES---SCT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCH
T ss_pred CcccEEEEEC---CcH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCH
Confidence 4466788887 667 5 88999999999988888889999999875
No 17
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=22.54 E-value=73 Score=32.22 Aligned_cols=28 Identities=14% Similarity=0.106 Sum_probs=24.0
Q ss_pred CCEEEeecCCCCCCCchHHHHHHHhhhc
Q 003243 322 GPFILNLDCDHYIFYSPALREGMCYMMD 349 (837)
Q Consensus 322 ~p~il~lD~D~~~n~p~~lr~amc~f~d 349 (837)
.++++++|||+=.-+++.+++.+..+.+
T Consensus 100 ~d~Vlv~~~d~Pli~~~~i~~li~~~~~ 127 (231)
T 3q80_A 100 PEFVLVHDAARALTPPALVARVVEALRD 127 (231)
T ss_dssp CSEEEECCTTCTTCCHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCcCCCCHHHHHHHHHHHhh
Confidence 5899999999866679999999887765
Done!