Query 003248
Match_columns 836
No_of_seqs 270 out of 693
Neff 4.8
Searched_HMMs 29240
Date Mon Mar 25 18:36:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003248.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003248hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ox0_A JMJC domain-containing 100.0 2.3E-86 7.7E-91 725.4 18.5 314 28-422 32-346 (381)
2 3dxt_A JMJC domain-containing 100.0 5.5E-84 1.9E-88 698.9 17.2 322 28-431 14-336 (354)
3 3opt_A DNA damage-responsive t 100.0 2E-84 6.8E-89 705.6 12.4 337 29-418 11-367 (373)
4 3avr_A Lysine-specific demethy 100.0 5.4E-55 1.8E-59 494.4 17.8 286 239-554 225-523 (531)
5 4ask_A Lysine-specific demethy 100.0 4.8E-51 1.7E-55 455.9 19.9 284 245-556 206-500 (510)
6 2xxz_A Lysine-specific demethy 100.0 8.2E-44 2.8E-48 383.8 11.2 157 242-407 169-330 (332)
7 2ypd_A Probable JMJC domain-co 98.3 3.4E-06 1.2E-10 92.8 11.9 104 303-406 234-344 (392)
8 3kv4_A PHD finger protein 8; e 98.0 5.5E-05 1.9E-09 85.3 15.7 147 272-434 234-383 (447)
9 3k3o_A PHF8, PHD finger protei 98.0 5.7E-05 1.9E-09 83.3 15.0 146 272-433 150-298 (371)
10 3pua_A GRC5, PHD finger protei 98.0 7.3E-05 2.5E-09 83.0 15.6 146 272-433 177-325 (392)
11 3kv5_D JMJC domain-containing 97.9 8.9E-05 3.1E-09 84.5 15.0 147 271-433 268-417 (488)
12 3kv9_A JMJC domain-containing 97.9 8.8E-05 3E-09 82.5 14.3 146 272-433 178-326 (397)
13 2yu1_A JMJC domain-containing 97.8 0.00035 1.2E-08 79.0 16.0 144 271-430 198-344 (451)
14 3k2o_A Bifunctional arginine d 97.6 0.00011 3.8E-09 80.1 9.1 119 270-398 173-299 (336)
15 3pur_A Lysine-specific demethy 97.4 0.0013 4.6E-08 75.2 14.3 139 271-425 298-443 (528)
16 4gjz_A Lysine-specific demethy 97.3 0.00064 2.2E-08 67.9 9.4 105 270-389 125-235 (235)
17 3d8c_A Hypoxia-inducible facto 96.2 0.017 5.8E-07 63.0 10.6 112 268-390 182-297 (349)
18 3al5_A HTYW5, JMJC domain-cont 96.0 0.015 5.2E-07 63.0 8.7 111 268-392 166-277 (338)
19 1vrb_A Putative asparaginyl hy 89.8 1.3 4.6E-05 48.0 10.5 116 271-402 143-265 (342)
20 4diq_A Lysine-specific demethy 81.6 7.3 0.00025 44.5 11.4 106 270-398 165-274 (489)
21 2xdv_A MYC-induced nuclear ant 58.0 57 0.0019 36.7 11.5 105 269-400 139-248 (442)
22 1wfh_A Zinc finger (AN1-like) 28.7 18 0.0006 30.7 1.0 37 492-530 15-52 (64)
23 1wg2_A Zinc finger (AN1-like) 26.6 21 0.00072 30.2 1.1 37 492-530 15-52 (64)
24 1wfp_A Zinc finger (AN1-like) 26.5 22 0.00074 30.9 1.2 38 491-530 24-62 (74)
25 2b8m_A Hypothetical protein MJ 25.2 53 0.0018 28.7 3.6 43 358-400 69-113 (117)
26 1wff_A Riken cDNA 2810002D23 p 23.9 24 0.00082 31.4 1.0 37 492-530 25-63 (85)
27 1wfl_A Zinc finger protein 216 23.8 29 0.00099 30.1 1.5 36 492-529 25-61 (74)
28 2pfw_A Cupin 2, conserved barr 20.7 87 0.003 27.0 4.1 24 356-379 73-96 (116)
No 1
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=100.00 E-value=2.3e-86 Score=725.36 Aligned_cols=314 Identities=35% Similarity=0.628 Sum_probs=275.0
Q ss_pred CCCCCCccCCCHHhhhCHHHHHHHHHHh-hhhcCceeEcCCCCCCCCCCCccccccccccccccchhhhccccccccccc
Q 003248 28 IIDEAPVFYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQQIDLLQNREPMRKK 106 (836)
Q Consensus 28 ~i~e~PVF~PT~EEF~DPl~YI~sI~~~-aekyGIcKIVPP~~WkPp~~l~~k~i~~~~kF~triQ~v~~Lq~r~p~~k~ 106 (836)
.-.++||||||+|||+||++||++|+++ |++|||||||||++|+|++.+++ .++++|++++|++...+.+..
T Consensus 32 ~~~~iPVF~PT~EEF~Df~~YI~kIe~~gA~~~GI~KIIPP~~W~p~~~~~~---~~~~~i~~piqQ~~~g~~g~~---- 104 (381)
T 2ox0_A 32 PSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDD---IDDLVIPAPIQQLVTGQSGLF---- 104 (381)
T ss_dssp TTCCCEEECCCHHHHSCHHHHHHHHHHTTGGGGSEEEECCCTTCCSCSCSTT---CTTCEESSCEEEEEEEETTEE----
T ss_pred CCCCCceEcCCHHHHhCHHHHHHHHHhccccccCceeecCCccCCCccccch---hhhcccCCcceeeecCCCccc----
Confidence 3458999999999999999999999998 68999999999999999998753 367899999998764432210
Q ss_pred chhhhhhhcccccccccccCCCCCccccccccccccccccCCCCCHHHHHHHHHHHHHhhhCCCCCCCCCcCCccccccC
Q 003248 107 IRSRKRKRRRQSRMGSTRRNANSSSEANAAETDEKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRL 186 (836)
Q Consensus 107 ~~~~k~k~~~~~~~~~~~r~~~s~~~~~~~~~~e~fgF~~g~~~tL~eF~~~A~~fk~~~f~~~~~~~~~~~~~~~~~~~ 186 (836)
..|+++ ++.|||++|+++|+.++.+ .+ .
T Consensus 105 ---------------------------------~~~~~~-~k~~tl~~f~~~a~~~~~~---~p---------------~ 132 (381)
T 2ox0_A 105 ---------------------------------TQYNIQ-KKAMTVREFRKIANSDKYC---TP---------------R 132 (381)
T ss_dssp ---------------------------------EEEEEE-CCCEEHHHHHHHHHSTTTS---CC---------------C
T ss_pred ---------------------------------cccccc-ccccCHHHHHHHhcccccC---CC---------------c
Confidence 123444 4789999999999975421 11 1
Q ss_pred CCCHHHHHHHhhhhccCCCCcceeeeCCCCCCCCCCCCCCCCCCCCCCCchhhhhccCcccCCCCCCCCCcccccCCCCC
Q 003248 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDIS 266 (836)
Q Consensus 187 ~ps~e~vE~efWr~V~~~~~~veV~YGaDl~s~~~GSgFp~~~~~~~~~~~~~y~~~~WNLnnLp~~~gSLL~~~~~~I~ 266 (836)
..+.++||++|||+|+. ++|+||+||+++.|+++ .++|||+|||.+.++||++.+.+|+
T Consensus 133 ~~~~~~lE~~fWr~v~~----~~~~YgaD~~gS~f~~~-----------------~~~WNL~~Lp~ll~~ll~~~~~~I~ 191 (381)
T 2ox0_A 133 YSEFEELERKYWKNLTF----NPPIYGADVNGTLYEKH-----------------VDEWNIGRLRTILDLVEKESGITIE 191 (381)
T ss_dssp CSSHHHHHHHHHHHTTS----SCCEEEEEEECCCSCTT-----------------CCSSCTTCCCCGGGHHHHHHCCCCB
T ss_pred cCCHHHHHHHHHhhCCc----CCceeecCCCcccCCCC-----------------CCCCchhhhhhHHHHHHHhcCCCCC
Confidence 24679999999999984 47899999986555432 3699999999999999999999999
Q ss_pred CcccceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccChhh
Q 003248 267 GVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSV 346 (836)
Q Consensus 267 GV~tP~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~ 346 (836)
|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++.+|+++.+|++||+|+++|++|+.
T Consensus 192 GVn~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~~~~~P~~~~~~~~~L~h~~~~isP~~ 271 (381)
T 2ox0_A 192 GVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLM 271 (381)
T ss_dssp TTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGGGSCEEECHHH
T ss_pred CcccceEEeeccccCcCceecCCcceeeEEeecCCceEEEecCHHHHHHHHHHHHHhChhhhhcchHHhhccccccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchhhhHHHHHHHHHHhccCCCCCcHHHHHHHH
Q 003248 347 LKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGS 422 (836)
Q Consensus 347 L~~~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~r~~~fs~d~LL~~~ 422 (836)
|+++||||++++|+|||||||||+|||+|||+||||+||||||+++|+++|..|.++++.. ..-.|+|+.++-++
T Consensus 272 L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA~~~Wl~~g~~a~~c~c~~-~~v~i~~d~~~~~~ 346 (381)
T 2ox0_A 272 LKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRK-DMVKISMDVFVRKF 346 (381)
T ss_dssp HHHTTCCCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEECCTTHHHHHHHCCCCCSST-TCCCCCCHHHHHHH
T ss_pred HHHCCCceEEEEecCCCEEEECCCcEEEeecCcccHHHHhccCcHHHHHHhHhhhhccccC-CceeecHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999876543 45566798886653
No 2
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=100.00 E-value=5.5e-84 Score=698.91 Aligned_cols=322 Identities=34% Similarity=0.599 Sum_probs=276.2
Q ss_pred CCCCCCccCCCHHhhhCHHHHHHHHHHh-hhhcCceeEcCCCCCCCCCCCccccccccccccccchhhhccccccccccc
Q 003248 28 IIDEAPVFYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQQIDLLQNREPMRKK 106 (836)
Q Consensus 28 ~i~e~PVF~PT~EEF~DPl~YI~sI~~~-aekyGIcKIVPP~~WkPp~~l~~k~i~~~~kF~triQ~v~~Lq~r~p~~k~ 106 (836)
...++||||||+|||+||.+||++|+++ |+++||||||||++|+|+...+ ++ +++.++++||++...+.+..
T Consensus 14 ~~~~ipvF~PT~eEF~df~~Yi~~ie~~Ga~~~Gi~KIIPP~~W~~r~~~~--~~-~~~~i~~pi~q~~~g~~G~~---- 86 (354)
T 3dxt_A 14 PNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARETYD--NI-SEILIATPLQQVASGRAGVF---- 86 (354)
T ss_dssp TTCCCEEECCCTTGGGCHHHHHHHHHHTTGGGGSEEEECCCTTCCSSSCST--TC-TTCEESSCEEEEEEEETTEE----
T ss_pred CCCCcceecCCHHHHhCHHHHHHHHHhccccccCcccccCcccccCccccc--ch-hcccccCCceeeecCCCceE----
Confidence 3567899999999999999999999998 5699999999999999997653 33 56788999988653322211
Q ss_pred chhhhhhhcccccccccccCCCCCccccccccccccccccCCCCCHHHHHHHHHHHHHhhhCCCCCCCCCcCCccccccC
Q 003248 107 IRSRKRKRRRQSRMGSTRRNANSSSEANAAETDEKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRL 186 (836)
Q Consensus 107 ~~~~k~k~~~~~~~~~~~r~~~s~~~~~~~~~~e~fgF~~g~~~tL~eF~~~A~~fk~~~f~~~~~~~~~~~~~~~~~~~ 186 (836)
..|+ ...+.||+.+|+++|+.. .|..+.
T Consensus 87 ---------------------------------~~~~-~~~k~~t~~~f~~~a~~~---~~~~p~--------------- 114 (354)
T 3dxt_A 87 ---------------------------------TQYH-KKKKAMTVGEYRHLANSK---KYQTPP--------------- 114 (354)
T ss_dssp ---------------------------------EEEE-EECCCEEHHHHHHHHTST---TTSCCC---------------
T ss_pred ---------------------------------EEee-eccCccCHHHHHHHHhhh---hccCCC---------------
Confidence 0122 234789999999999853 243322
Q ss_pred CCCHHHHHHHhhhhccCCCCcceeeeCCCCCCCCCCCCCCCCCCCCCCCchhhhhccCcccCCCCCCCCCcccccCCCCC
Q 003248 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDIS 266 (836)
Q Consensus 187 ~ps~e~vE~efWr~V~~~~~~veV~YGaDl~s~~~GSgFp~~~~~~~~~~~~~y~~~~WNLnnLp~~~gSLL~~~~~~I~ 266 (836)
..+.++||++||+.+... .|+||||++ ||+||.. .++|||+|||.+.++||++.+.+|+
T Consensus 115 ~~~~~~lE~~fW~~~~~~----~p~YgaD~~----gS~F~~~-------------~~~WNL~~L~~~~~~Ll~~~~~~I~ 173 (354)
T 3dxt_A 115 HQNFEDLERKYWKNRIYN----SPIYGADIS----GSLFDEN-------------TKQWNLGHLGTIQDLLEKECGVVIE 173 (354)
T ss_dssp CSSHHHHHHHHHHHGGGC----CCEEEEEEE----CCCSCTT-------------CCSSCTTSSCCHHHHHHHHHCCCCC
T ss_pred CCCHHHHHHHHhhhcccC----CceeeecCC----CcccCCC-------------cchhhhhhccchhHHHHhhcCCCCC
Confidence 235789999999998743 589999987 7788753 4699999999999999999999999
Q ss_pred CcccceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccChhh
Q 003248 267 GVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSV 346 (836)
Q Consensus 267 GV~tP~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~ 346 (836)
|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++.+|+.++.|++||+|++++++|+.
T Consensus 174 GVntP~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~~~c~~fL~h~~~lisP~~ 253 (354)
T 3dxt_A 174 GVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTV 253 (354)
T ss_dssp CCCCCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGGGCCEEECHHH
T ss_pred CccceeeeeccccCCCcceecCCcceEEEEEecCCceEEEEeCHHHHHHHHHHHHHhCchhhhhcHHHHhcCcccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchhhhHHHHHHHHHHhccCCCCCcHHHHHHHHHHHH
Q 003248 347 LKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAA 426 (836)
Q Consensus 347 L~~~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~r~~~fs~d~LL~~~A~~~ 426 (836)
|+++||||++++|+|||||||||+|||+|||+||||+||||||+++||++|+.|.++.+... ...|+||.++-.. +..
T Consensus 254 L~~~GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~A~~C~C~~~-~v~i~~d~~~~~~-~~~ 331 (354)
T 3dxt_A 254 LKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGEA-RVTFSMDAFVRIL-QPE 331 (354)
T ss_dssp HHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCGGGHHHHHHCCCCCSSSC-CCCHHHHHHHHHH-CHH
T ss_pred HHHCCCceEEEEeCCCcEEEECCCceEEEeeccccHhHhhccCcHHHHHhhhhcccccccCc-cceecHHHHHHhh-CHH
Confidence 99999999999999999999999999999999999999999999999999999988876543 4568998887543 333
Q ss_pred HHHHH
Q 003248 427 IKALW 431 (836)
Q Consensus 427 ~~~l~ 431 (836)
...+|
T Consensus 332 ~~~~w 336 (354)
T 3dxt_A 332 RYDLW 336 (354)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 34444
No 3
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=100.00 E-value=2e-84 Score=705.58 Aligned_cols=337 Identities=31% Similarity=0.592 Sum_probs=236.0
Q ss_pred CCCCCccCCCHHhhhCHHHHHHHHHHhhhhcCceeEcCCCCCCCCCCCc-cccccccccccccchh-------hhccccc
Q 003248 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLK-AKNIWENAKFSTRIQQ-------IDLLQNR 100 (836)
Q Consensus 29 i~e~PVF~PT~EEF~DPl~YI~sI~~~aekyGIcKIVPP~~WkPp~~l~-~k~i~~~~kF~triQ~-------v~~Lq~r 100 (836)
.++|||||||+|||+||.+||++|+++|+++||||||||++|+|++... ..+.+++++++++||| +..+||.
T Consensus 11 ~~~~pVF~PT~eeF~dF~~yi~~i~~~g~~~Gi~KVIPPkeW~~~~~~~~~~~~l~~~~i~~PI~Q~~~G~~G~~~~~ni 90 (373)
T 3opt_A 11 VGGVPVFKPTYEQFEDFYAYCKAINKYGMKSGVVKVIPPKEWKDKLDLPYSAETLQKIKIKSPIQQHISGNKGLFMVQNV 90 (373)
T ss_dssp ESSSEEECCCHHHHTCHHHHHHTTHHHHTTSSEEEECCCHHHHTTSCSSCCHHHHHHCEEESCEEEEEEESSSEEEEEEE
T ss_pred cCCCCeeCCCHHHHhCHHHHHHHHHHhccccCeEEEeCchhhhhcccCCCcHhHHhcCcCCCCcEEEecCCCceEEEeee
Confidence 4789999999999999999999999999999999999999999997422 1234578899999998 5555666
Q ss_pred ccccccchhh------------hhhhcccccccccccCCCCCccccccccccccccccCCCCCHHHHHHHHHHHHHhhhC
Q 003248 101 EPMRKKIRSR------------KRKRRRQSRMGSTRRNANSSSEANAAETDEKFGFQSGPDLTLEGFQKYAQNFKECYFG 168 (836)
Q Consensus 101 ~p~~k~~~~~------------k~k~~~~~~~~~~~r~~~s~~~~~~~~~~e~fgF~~g~~~tL~eF~~~A~~fk~~~f~ 168 (836)
++.|+..... ++++|+..+.+...+.. ..... ..+..+++++|+++++.|+..
T Consensus 91 e~~r~~~~~q~k~l~~~~~~p~~~~~~~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~~~~~~~~~~~--- 155 (373)
T 3opt_A 91 EKNKTYNIIQWKDLSKDYVPPEDPKARRNSRKGSVSKST------KLKLK------NFESSFNIDDFEQFRTEYTID--- 155 (373)
T ss_dssp ECSCEEEHHHHHHHTTSSCCCCC------------------------------------CCCCHHHHHHHTTTSSCC---
T ss_pred ccccccCHHHHHHhhhhcCCCcccccccccccccccccc------ccccc------ccccccchHHHHHHHHhhccc---
Confidence 5554433221 12222222222111110 00000 012468999998865543221
Q ss_pred CCCCCCCCcCCccccccCCCCHHHHHHHhhhhccCCCCcceeeeCCCCCCCCCCCCCCCCCCCCCCCchhhhhccCcccC
Q 003248 169 MNDSKEDVKSDGFEHKRLEPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLN 248 (836)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~ps~e~vE~efWr~V~~~~~~veV~YGaDl~s~~~GSgFp~~~~~~~~~~~~~y~~~~WNLn 248 (836)
. ++.. .+++.++||++||++|+. .+|+||||+ .||+||.. .++|||+
T Consensus 156 --~------~~~~----~~~~~~~lE~~yW~~~~~----~~p~YgaD~----~GS~F~~~-------------~~~WNL~ 202 (373)
T 3opt_A 156 --L------SDFQ----NTERLKFLEEYYWKTLNF----TTPMYGADT----PGSIFPEG-------------LNVWNVA 202 (373)
T ss_dssp --C------TTSS----CHHHHHHHHHHHHHTTTT----SCCEEEEEE----ECCCSCTT-------------CCSSCTT
T ss_pred --h------hhcc----CcchHHHHHHHHHHhccC----CCceEecCC----CCCCcCCC-------------CCccChh
Confidence 0 0000 024678999999999985 368999996 58999853 4799999
Q ss_pred CCCCCCCCcccccCCCCCCcccceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhh
Q 003248 249 NLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLF 328 (836)
Q Consensus 249 nLp~~~gSLL~~~~~~I~GV~tP~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f 328 (836)
||| +||+|++.+|+|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++.+|+++
T Consensus 203 ~Lp----~lL~~l~~~I~GVntP~LYvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~ 278 (373)
T 3opt_A 203 KLP----NILDHMETKVPGVNDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPEEA 278 (373)
T ss_dssp SCC------------------CCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSHHHH
T ss_pred hhh----hHHHHhcccCCCcchhheeeccccCCcceeecCCcceeEEEeecCCCeEEEEeCHHHHHHHHHHHHHhChhhh
Confidence 999 4899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcChhhhhccccccChhhhhhCCCCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchhhhHHHHHHHHHHhcc
Q 003248 329 EEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQH 408 (836)
Q Consensus 329 ~~~pd~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~ 408 (836)
.+|++||+|++++++|+.|+++||||++++|+|||||||||+|||+|||+||||+||||||+++||++|+.|..+.+. .
T Consensus 279 ~~c~~fL~h~~~lisP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~a~~C~C~-~ 357 (373)
T 3opt_A 279 KNCPEFLRHKMFLASPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKAGKCHCI-S 357 (373)
T ss_dssp SSCSSCTTTSCEEECHHHHHTTTCCCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEECCC-----------------
T ss_pred hhCHHHhhCCcccCCHHHHHhcCCceEEEEECCCCEEEECCCceEEEEecCccHHHHHccCcHHHHHhhccCccCccc-C
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999988664 2
Q ss_pred CCCCCcHHHH
Q 003248 409 RKTSLSHDKL 418 (836)
Q Consensus 409 r~~~fs~d~L 418 (836)
..--|++++|
T Consensus 358 d~v~i~~~~~ 367 (373)
T 3opt_A 358 DSVEIDVKKL 367 (373)
T ss_dssp ----------
T ss_pred CcceecHHHH
Confidence 2333455544
No 4
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=100.00 E-value=5.4e-55 Score=494.36 Aligned_cols=286 Identities=19% Similarity=0.162 Sum_probs=223.8
Q ss_pred hhhccCcccCCCCCC-----CCCcccccCCCCCCcccceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccH
Q 003248 239 QYAMSGWNLNNLPRL-----PGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHA 313 (836)
Q Consensus 239 ~y~~~~WNLnnLp~~-----~gSLL~~~~~~I~GV~tP~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a 313 (836)
.+...-|||++||.. .||||+|++..|+|||+|||||||+||+||||+||++|+||||||+|++|+||+||++++
T Consensus 225 ~w~~ql~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~~ 304 (531)
T 3avr_A 225 KWKLQLHELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGYW 304 (531)
T ss_dssp TTHHHHHHGGGSCGGGCSSCTTCGGGGSCSCCBTTSSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGH
T ss_pred hhHHHHHHHHhCCHHHcccCccchhhhcCCCCCCcChhheEeecCcccccceecCCcceeeEeecCCCCeEEEEeCHHHH
Confidence 344567899999974 899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcchhhhcChhhhhccccccChhhhhhCCCCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchh
Q 003248 314 STLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW 393 (836)
Q Consensus 314 ~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dW 393 (836)
++||+++++... +++. ..+|++|+.|.++|||||+++|+|||||||||||||||||+|||++||||||+++|
T Consensus 305 ~k~e~l~~k~~~-------~~~~-~~~~~~p~~L~~~gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~ 376 (531)
T 3avr_A 305 GVLNDFCEKNNL-------NFLM-GSWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTA 376 (531)
T ss_dssp HHHHHHHHHTTC-------CTTT-SCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCSSH
T ss_pred HHHHHHHHHcCC-------Chhh-ceeecCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeeeEEEeccCch
Confidence 999999988643 4443 46889999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHH---hccCCCCCcHHHHHHHHHHHHHHHHHhhhhhcccCCCcchhhhhcccchhHHHHHHHHH-HHHHh
Q 003248 394 LAHGQQAVELYS---EQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRV-QMKKE 469 (836)
Q Consensus 394 L~~g~~a~e~y~---~~~r~~~fs~d~LL~~~A~~~~~~l~~~~l~~k~~~~~~~~~~~c~~~~il~~alk~r~-~~e~~ 469 (836)
++++. |+++|+ ..+..++|||++|+|++|+... . .+++.+.+.+.|+ ...++... ..+..
T Consensus 377 ~q~~~-A~e~y~~Nk~~~~~sivp~~~L~wn~a~~~~-------~---~d~~l~~~ik~~L-----~rsl~~~~~~~~~l 440 (531)
T 3avr_A 377 CQYKL-AVERYEWNKLQSVKSIVPMVHLSWNMARNIK-------V---SDPKLFEMIKYCL-----LRTLKQCQTLREAL 440 (531)
T ss_dssp HHHHH-HHHHHHHHHHHTCCCSSCHHHHHHHHHHHCC-------C---CCHHHHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHhhhccCCCCCCHHHHHHHHHhhhh-------c---ccHHHHHHHHHHH-----HHHHHHHHHHHHHH
Confidence 99985 777774 4456899999999999998521 0 1111223333332 22222211 11110
Q ss_pred hcccCchhhhhhhhccccCCccccccccccchhhhccccccc---c-CCccccccchhhhcCCCCCceEEEEEcCHHHHH
Q 003248 470 GLQKLPSYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKC---S-PDRFACLKHANIFCSCEIDHRFVILRYSTDELN 545 (836)
Q Consensus 470 ~~~~l~~~~~~~k~~~~~d~~~er~C~~Ck~~cfLS~V~C~C---~-~~~v~CL~Ha~~lCsC~~~~~~LlyRYt~~EL~ 545 (836)
..... .+ ........++.+.|..|+.+||++.+.|.. . ...++|++|+...|.| ..+.+++|||+++||.
T Consensus 441 ~~~g~----~i-~~~~~~~~~~~~~C~~C~~~lFn~~~v~~~~~~~~~~~v~C~~Ca~~~~~~-l~~~~v~~ry~~eeL~ 514 (531)
T 3avr_A 441 IAAGK----EI-IWHGRTKEEPAHYCSICEVEVFDLLFVTNESNSRKTYIVHCQDCARKTSGN-LENFVVLEQYKMEDLM 514 (531)
T ss_dssp HHTTC----CE-EECCCCTTCCCEECTTTCCEECSEEEEEECTTCSSEEEEECHHHHHHHCTT-CTTCEEEECSCHHHHH
T ss_pred HhCCC----EE-EeccccCCCCCeeccccchhheeeEEEEecCCCCCCCCcCChhhhhhcCcc-ccceEEEEEcCHHHHH
Confidence 00011 00 011111135789999999999999988742 1 2357999999875544 5678999999999999
Q ss_pred HHHHHHHhc
Q 003248 546 TLVEALEGG 554 (836)
Q Consensus 546 ~lv~~le~~ 554 (836)
+++++|+..
T Consensus 515 ~~yd~f~~~ 523 (531)
T 3avr_A 515 QVYDQFTLA 523 (531)
T ss_dssp HHHHTCCCC
T ss_pred HHHHheEec
Confidence 999998755
No 5
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=100.00 E-value=4.8e-51 Score=455.90 Aligned_cols=284 Identities=20% Similarity=0.168 Sum_probs=221.8
Q ss_pred cccCCCCCC-----CCCcccccCCCCCCcccceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHH
Q 003248 245 WNLNNLPRL-----PGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKA 319 (836)
Q Consensus 245 WNLnnLp~~-----~gSLL~~~~~~I~GV~tP~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l 319 (836)
.+|++||.. .|+||+|++..|+|||+||||+||+||+|+||+||++|+||||||+|++|+||+||++++++||++
T Consensus 206 ~eL~kLP~flr~~~~gslLs~l~~~I~GVNtpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l 285 (510)
T 4ask_A 206 QELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAF 285 (510)
T ss_dssp HHGGGSCGGGSSSCTTBGGGGSSSCCTTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHH
T ss_pred HHHhhCcHHhCcCCCCchhhhCCCcCCCcChhheEEccccccccceecCCcceeEEEeecCCceeEEEECHHHHHHHHHH
Confidence 346677655 589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcchhhhcChhhhhccccccChhhhhhCCCCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchh--hhHH
Q 003248 320 MRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW--LAHG 397 (836)
Q Consensus 320 ~k~~~p~~f~~~pd~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dW--L~~g 397 (836)
+++.. +++++ ..+|++|+.|+++|||||+++|+|||||||||||||||+|.||++++|||||+++| ++.+
T Consensus 286 ~~k~~-------~d~l~-~~~~pspe~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNvap~t~~qlqlA 357 (510)
T 4ask_A 286 CDRHG-------VDYLT-GSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLA 357 (510)
T ss_dssp HHHTT-------CCTTT-SCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECBSSHHHHHHH
T ss_pred HHHhC-------cchhh-ccccCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecCeeeeeEEEecCCCHHHHHHH
Confidence 99854 45664 46789999999999999999999999999999999999999999999999999986 5677
Q ss_pred HHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHhhhhhcccCCCcchhhhhcccchhHHHHHHHHHHHHHhhcccCchh
Q 003248 398 QQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSY 477 (836)
Q Consensus 398 ~~a~e~y~~~~r~~~fs~d~LL~~~A~~~~~~l~~~~l~~k~~~~~~~~~~~c~~~~il~~alk~r~~~e~~~~~~l~~~ 477 (836)
.++.++|+..++.++|||++|+|+||++... .+++.++..+. +|.++++.. +++...... .+
T Consensus 358 ~e~y~~n~~~~~~SivPm~~L~Wn~Ar~~k~----------~d~~l~~liK~-----~L~rSL~~~-~~~~d~~~~--~g 419 (510)
T 4ask_A 358 LERYEWNEVKNVKSIVPMIHVSWNVARTVKI----------SDPDLFKMIKF-----CLLQSMKHC-QVQRESLVR--AG 419 (510)
T ss_dssp HHHHHHHHHTTCCCSSCHHHHHHHHHHHCCC----------CCHHHHHHHHH-----HHHHHHHHH-HHHHHHHHH--HT
T ss_pred HHHHHHHHHhCcCcccChHHHHHHHHhhhhc----------cCHHHHHHHHH-----HHHHHHHHH-HHHHHHHHh--CC
Confidence 7788899999999999999999999985321 01112223332 234444432 222111110 01
Q ss_pred hhhhhhccccCCccccccccccchhhhcccccccc----CCccccccchhhhcCCCCCceEEEEEcCHHHHHHHHHHHHh
Q 003248 478 FKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCS----PDRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEG 553 (836)
Q Consensus 478 ~~~~k~~~~~d~~~er~C~~Ck~~cfLS~V~C~C~----~~~v~CL~Ha~~lCsC~~~~~~LlyRYt~~EL~~lv~~le~ 553 (836)
.+. +..+....+..+.|..|...+|.-..+-.-+ ...++|+.||.... -...++++++||+++||.++++.|..
T Consensus 420 ~~i-~~~~~~~~~~~~~C~~C~~evFn~l~v~~~~~~~~~~~v~C~~Ca~~~~-~~~~~~~vl~~y~~~~L~~iyD~f~l 497 (510)
T 4ask_A 420 KKI-AYQGRVKDEPAYYCNECDVEVFNILFVTSENGSRNTYLVHCEGCARRRS-AGLQGVVVLEQYRTEELAQAYDAFTL 497 (510)
T ss_dssp CCE-EECCCCTTCCCEECTTTCCEECSEEEEEECC----CEEEECHHHHHHST-TTTTTCEEEESSCHHHHHHHHHHCCC
T ss_pred CEE-eecCcCCCCcccccCCCCeEEEEEEEEEecCCCCCccceEChHhhhhcC-CCcceEEEEEEccHHHHHHHHhCeEe
Confidence 111 1112222245689999999999988654321 12479999998753 36788999999999999999999976
Q ss_pred chh
Q 003248 554 GLD 556 (836)
Q Consensus 554 ~~~ 556 (836)
...
T Consensus 498 ~~~ 500 (510)
T 4ask_A 498 APA 500 (510)
T ss_dssp CC-
T ss_pred ccC
Confidence 543
No 6
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.2e-44 Score=383.84 Aligned_cols=157 Identities=25% Similarity=0.221 Sum_probs=138.6
Q ss_pred ccCcccCCCCCC-----CCCcccccCCCCCCcccceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHH
Q 003248 242 MSGWNLNNLPRL-----PGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTL 316 (836)
Q Consensus 242 ~~~WNLnnLp~~-----~gSLL~~~~~~I~GV~tP~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kF 316 (836)
..-++|+.||.. .++||+|++..|+|||+||||+||+||+||||+||++|+||||||+|++|+||+||++++++|
T Consensus 169 ~q~~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~~~~~ 248 (332)
T 2xxz_A 169 PQLQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETI 248 (332)
T ss_dssp HHHHHHTTSCGGGCTTTTCCCSEETTEECCCTTSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHH
T ss_pred HHHHHHhhCcHhhcccCccchhhhcCCcCCCcChhheEeecCcccccceecCCcceeEEeecCCCceEEEEECHHHHHHH
Confidence 334568899865 689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcchhhhcChhhhhccccccChhhhhhCCCCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchhhhH
Q 003248 317 EKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAH 396 (836)
Q Consensus 317 E~l~k~~~p~~f~~~pd~L~h~~~~isP~~L~~~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dWL~~ 396 (836)
|++|++..+ ++++ ..+|++|+.|+++||||||++|+|||||||||||||||||+|||++||||||+++|+++
T Consensus 249 e~l~~k~~~-------d~~~-~~~~~~p~~L~~~gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~q~ 320 (332)
T 2xxz_A 249 SAFCDRHGV-------DYLT-GSWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQY 320 (332)
T ss_dssp HHHHHHTTC-------CTTT-SCBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEESCTTGGG
T ss_pred HHHHHhcCC-------chhh-ceecCCHHHHHhCCCCeEEEEECCCCEEEECCCceEEEEecceeeEEEEEeCCCcHHHH
Confidence 999998654 3443 35789999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHhc
Q 003248 397 GQQAVELYSEQ 407 (836)
Q Consensus 397 g~~a~e~y~~~ 407 (836)
+.|+++|+-+
T Consensus 321 -~~a~erye~n 330 (332)
T 2xxz_A 321 -QLALERYEWN 330 (332)
T ss_dssp -GGC-------
T ss_pred -HHHHHHHHhh
Confidence 4888888754
No 7
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=98.27 E-value=3.4e-06 Score=92.82 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=82.7
Q ss_pred eeEEEeCcccHHHHHHHHHHhcchhh---hcChhhhhccccccChh----hhhhCCCCeeEeecCCCcEEEEcCCcceee
Q 003248 303 KIWYGVPGSHASTLEKAMRKHLPDLF---EEQPDLLHELVTQLSPS----VLKAEGVPVYHVVQHSGEFVLTFPRAYHSG 375 (836)
Q Consensus 303 KiWY~VP~~~a~kFE~l~k~~~p~~f---~~~pd~L~h~~~~isP~----~L~~~GIpv~r~vQ~pGEfVVTfPgaYHsg 375 (836)
-+|-+..+.+++|+.+++++...+.- ....+-++...+.++.. ...+.||..+.++|++||.|++-+|++|.+
T Consensus 234 AlW~Ifr~~D~~klr~~L~~~~~e~~~~~~~~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV 313 (392)
T 2ypd_A 234 ALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQV 313 (392)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHC------CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEE
T ss_pred ceeeeeCHhhHHHHHHHHHHHHHhhCCCccCCCCcCcCCCEEecHHHHHHHHHhcCCeeEEEEEcCCCEEEecCCCHHHH
Confidence 58999999999999999999765421 11234566667778874 345699999999999999999999999999
Q ss_pred eecccceeeeeccccchhhhHHHHHHHHHHh
Q 003248 376 FNCGFNCAEAVNVAPVDWLAHGQQAVELYSE 406 (836)
Q Consensus 376 fn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~ 406 (836)
.|.+-++..|+||..+.=+.....-.+.+|.
T Consensus 314 ~Nl~~~i~va~df~spe~~~~c~~lt~E~R~ 344 (392)
T 2ypd_A 314 QNFHSCIQVTEDFVSPEHLVESFHLTQELRL 344 (392)
T ss_dssp EESSEEEEEEEEECCGGGHHHHHHHHHHC--
T ss_pred hcccchhhHhhhhcChhhHHHHHHHHHHHhh
Confidence 9999999999999999988765544444443
No 8
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=98.04 E-value=5.5e-05 Score=85.34 Aligned_cols=147 Identities=11% Similarity=0.005 Sum_probs=107.0
Q ss_pred eEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccChhhhhhCC
Q 003248 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEG 351 (836)
Q Consensus 272 ~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~L~~~G 351 (836)
|+++|+.+|.+.+|++-....+.|.+..| -|.||-+||.... +. +.+.... ...+ ...++ + ...
T Consensus 234 ~~~mG~~gS~T~~HiD~~~ts~w~~vi~G-rK~w~L~PPt~~n-l~-~~~~~~~----s~~~----~~~~~-~----~~~ 297 (447)
T 3kv4_A 234 YCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSS----SSNQ----NEMFF-G----DQV 297 (447)
T ss_dssp EEEEECTTEEEEEECCGGGCEEEEEEEES-EEEEEEECCCHHH-HH-HHHHHHT----CSSG----GGSCG-G----GGS
T ss_pred EEEEeCCCCCCCeeECCCCCceeEEEeee-EEEEEEeCCCccc-cc-chhhccc----Ccch----hhhhc-c----ccc
Confidence 89999999999999999888888888888 8999999999643 11 1111110 0000 01111 1 123
Q ss_pred CCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchhhhHHHHHHHHHHhccCCCC--C-cHHHHHHHHHHHHHH
Q 003248 352 VPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTS--L-SHDKLLFGSVQAAIK 428 (836)
Q Consensus 352 Ipv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~r~~~--f-s~d~LL~~~A~~~~~ 428 (836)
...++++|+|||.+++-.|-+|+++|..-+++..-||....-|+.-....+.=+..+.+.. | -++.|+|-+|.....
T Consensus 298 ~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~~~~~~~~p~f~~~~w~~~~~~~~ 377 (447)
T 3kv4_A 298 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILD 377 (447)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHHHHH
T ss_pred cceEEEEECCCcEEecCCCCeEEEecCCCEEEEccccccccCHHHHHHHHHHHHhcCCCccccccCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999988877776654333333332 3 358899999988776
Q ss_pred HHHhhh
Q 003248 429 ALWELS 434 (836)
Q Consensus 429 ~l~~~~ 434 (836)
.+.++.
T Consensus 378 ~~~~~~ 383 (447)
T 3kv4_A 378 IFRGLR 383 (447)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665443
No 9
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=98.02 E-value=5.7e-05 Score=83.34 Aligned_cols=146 Identities=11% Similarity=0.015 Sum_probs=104.5
Q ss_pred eEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccChhhhhhCC
Q 003248 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEG 351 (836)
Q Consensus 272 ~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~L~~~G 351 (836)
|+++|+.+|.+.+|++-....+-+.+..| -|.||-+||.... +. +.+.... ..+ +...++ + ...
T Consensus 150 ~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~n-l~-~y~~~~~-----s~~---~~e~~~-~----~~~ 213 (371)
T 3k3o_A 150 YCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSS-----SSN---QNEMFF-G----DQV 213 (371)
T ss_dssp EEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHH-HH-HHHHHHT-----STT---GGGSCG-G----GTS
T ss_pred EEEEcCCCCCCCeEECCCCCceeEEEeee-EEEEEEECCCccc-cc-ccccccc-----CCc---cchhhc-c----ccc
Confidence 89999999999999999888888888888 8999999998753 21 1111110 000 001111 1 123
Q ss_pred CCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchhhhHHHHHHHHHHhccCCCC--C-cHHHHHHHHHHHHHH
Q 003248 352 VPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTS--L-SHDKLLFGSVQAAIK 428 (836)
Q Consensus 352 Ipv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~r~~~--f-s~d~LL~~~A~~~~~ 428 (836)
...++++|+|||.+++-.|-+|+++|..-+++..-||....=++.-..+.+.=+..+.+.. | -++.|+|-+|.....
T Consensus 214 ~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~w~~~~~~~~ 293 (371)
T 3k3o_A 214 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILD 293 (371)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHC----CCCTTHHHHHHHHHHHHHH
T ss_pred CceEEEEECCCcEEEeCCCCeEEEecCCCeEEECCcccchhhHHHHHHHHHHHHhcCCCcccccccHHHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999999999888777666554333333332 3 358899998887766
Q ss_pred HHHhh
Q 003248 429 ALWEL 433 (836)
Q Consensus 429 ~l~~~ 433 (836)
.+.++
T Consensus 294 ~~~~~ 298 (371)
T 3k3o_A 294 IFRGL 298 (371)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55543
No 10
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=98.00 E-value=7.3e-05 Score=82.98 Aligned_cols=146 Identities=9% Similarity=-0.021 Sum_probs=106.0
Q ss_pred eEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccChhhhhhCC
Q 003248 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEG 351 (836)
Q Consensus 272 ~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~L~~~G 351 (836)
|+++|+.+|.+.+|++-....+.|.+..| -|.||.+||..... . +.+... ....+ ...++ +. ..
T Consensus 177 ~~~mGp~gS~T~fHiD~~gTs~w~~vi~G-rK~w~L~PPt~~nl-~-~y~~~~----~s~~~----~e~~~-~~----~~ 240 (392)
T 3pua_A 177 YCLICVKDSYTDFHIDSGGASAWYHVLKG-EKTFYLIRPASANI-S-LYERWR----SASNH----SEMFF-AD----QV 240 (392)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH-H-HHHHHH----HSTTG----GGSCG-GG----GS
T ss_pred EEEEeCCCCCCCEeECCCCCceeeeeccc-eEEEEEECCCcccc-c-chhhcc----cCcch----hhhhh-cc----cc
Confidence 89999999999999998888888888888 89999999987532 1 111110 00000 01111 11 12
Q ss_pred CCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchhhhHHHHHHHHHHhccCCCC--C-cHHHHHHHHHHHHHH
Q 003248 352 VPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTS--L-SHDKLLFGSVQAAIK 428 (836)
Q Consensus 352 Ipv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~r~~~--f-s~d~LL~~~A~~~~~ 428 (836)
...++++|+|||.+++-.|-+|+++|..-+++..-||.+..=++....+.+.=+..+.+.. | -++.|+|-+|.....
T Consensus 241 ~~~~ev~l~pGEtlfIPsGWwH~V~nledSIai~gNFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~wy~~~~~l~ 320 (392)
T 3pua_A 241 DKCYKCIVKQGQTLFIPSGWIYATLTPVDCLAFAGHFLHSLSVEMQMRAYEVERRLKLGSLTQFPNFETACWYMGKHLLE 320 (392)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCTTCHHHHHHHHHHHHHHTCCCSSCCTTHHHHHHHHHHHHHH
T ss_pred cceEEEEECCCcEEeeCCCceEEEecCCCEEEEcCcccChhhHHHHHHHHHHHHHhCCCccCcCCChHHHHHHHHHHHHH
Confidence 4668999999999999999999999999999999999999988887777664333333333 3 468899988887666
Q ss_pred HHHhh
Q 003248 429 ALWEL 433 (836)
Q Consensus 429 ~l~~~ 433 (836)
.+.++
T Consensus 321 ~~~~~ 325 (392)
T 3pua_A 321 AFKGS 325 (392)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 11
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=97.93 E-value=8.9e-05 Score=84.54 Aligned_cols=147 Identities=12% Similarity=0.073 Sum_probs=106.9
Q ss_pred ceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccChhhhhhC
Q 003248 271 PWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAE 350 (836)
Q Consensus 271 P~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~L~~~ 350 (836)
-|+++|..+|.+.+|++-....+.+.+..| -|.|+-+||..... . +.+... ...++ ...+ +...
T Consensus 268 r~~~mG~~gS~T~~H~D~~~t~~w~~vv~G-~K~w~L~PPt~~~~-~-~y~~~~----~~~~~----~~~~-----~~~~ 331 (488)
T 3kv5_D 268 KYCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENL-A-RYESWS----SSVTQ----SEVF-----FGDK 331 (488)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH-H-HHHHHH----TCSSG----GGSC-----GGGS
T ss_pred eEEEEcCCCCCCCeEECCCCCceeeeccCe-eEEEEEeCCccccc-c-cccccc----cCCcc----chhh-----hccc
Confidence 389999999999999999888888888888 89999999976431 1 111111 01110 0011 1122
Q ss_pred CCCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchhhhHHHHHHHHHHhccCCCCC---cHHHHHHHHHHHHH
Q 003248 351 GVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSL---SHDKLLFGSVQAAI 427 (836)
Q Consensus 351 GIpv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~r~~~f---s~d~LL~~~A~~~~ 427 (836)
....++++|+|||.+++-.|=+|+++|..-+++..-||....=++.-..+.+.=+..+.+..| -+++|+|-+|....
T Consensus 332 ~~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~e~~~~~~~~~~~p~f~~~~w~~~~~~l 411 (488)
T 3kv5_D 332 VDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAKNLL 411 (488)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHTTCCTTSSCTTHHHHHHHHHHHHH
T ss_pred ccceEEEeeCCCCEEEeCCCceEEeeCCCCeEEEccccCCccCHHHHHHHHHHHHhcCCcccccCccHHHHHHHHHHHHH
Confidence 347789999999999999999999999999999999999999888777766654444444444 35888998888766
Q ss_pred HHHHhh
Q 003248 428 KALWEL 433 (836)
Q Consensus 428 ~~l~~~ 433 (836)
..+.++
T Consensus 412 ~~~~~~ 417 (488)
T 3kv5_D 412 ETLKEL 417 (488)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555433
No 12
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=97.92 E-value=8.8e-05 Score=82.51 Aligned_cols=146 Identities=12% Similarity=0.075 Sum_probs=105.5
Q ss_pred eEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccChhhhhhCC
Q 003248 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEG 351 (836)
Q Consensus 272 ~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~L~~~G 351 (836)
|+++|+.+|.+.+|++-....+.+.+..| -|.||.+||..... .+.+... ...++ ...++ +. ..
T Consensus 178 ~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~nl--~ly~~~~----~s~~~----~e~~~-~~----~~ 241 (397)
T 3kv9_A 178 YCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENL--ARYESWS----SSVTQ----SEVFF-GD----KV 241 (397)
T ss_dssp EEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH--HHHHHHH----TSGGG----GGSCG-GG----GS
T ss_pred EEEEcCCCCCCCEEECCCCCceeeeecCc-eEEEEEeCCccccc--ccccccc----cCCCc----chhhh-cc----cc
Confidence 99999999999999999888888888888 89999999987541 1111111 00000 01111 11 12
Q ss_pred CCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchhhhHHHHHHHHHHhccCCCCC---cHHHHHHHHHHHHHH
Q 003248 352 VPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSL---SHDKLLFGSVQAAIK 428 (836)
Q Consensus 352 Ipv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~r~~~f---s~d~LL~~~A~~~~~ 428 (836)
...++++|+|||.+++-.|-+|+++|..-+++..-||....=++.-..+.+.=...+.+..| -+++|+|-+|.....
T Consensus 242 ~~~~~v~l~pGe~lfIPsGW~H~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~k~~~~~~fp~F~~~~w~~a~~~l~ 321 (397)
T 3kv9_A 242 DKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAKNLLE 321 (397)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHTCGGGGGSTTHHHHHHHHHHHHHH
T ss_pred CceEEEEECCCCEEEeCCCCeEEccCCcCeEEECCcccCchhHHHHHHHHHHHHhcCCCccCcCccHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999888777665543333333333 458889988887665
Q ss_pred HHHhh
Q 003248 429 ALWEL 433 (836)
Q Consensus 429 ~l~~~ 433 (836)
.+.++
T Consensus 322 ~~~~~ 326 (397)
T 3kv9_A 322 TLKEL 326 (397)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55433
No 13
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=97.76 E-value=0.00035 Score=78.98 Aligned_cols=144 Identities=9% Similarity=-0.001 Sum_probs=99.3
Q ss_pred ceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccChhhhhhC
Q 003248 271 PWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAE 350 (836)
Q Consensus 271 P~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~L~~~ 350 (836)
-|+++|..+|.+.+|.+-....+.|.+..| -|.|+.+||...... +...... ...+.+ .+-|+.+
T Consensus 198 r~~~mGp~gS~T~~H~D~~~ts~w~avi~G-rK~w~L~PP~~~~~~--~y~~~~~--s~~q~~-------~~~p~~~--- 262 (451)
T 2yu1_A 198 KYCLMSVRGCYTDFHVDFGGTSVWYHIHQG-GKVFWLIPPTAHNLE--LYENWLL--SGSQGD-------IFLGDRV--- 262 (451)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEES-CEEEEEECCCHHHHH--HHHHHHH--TTCCSS-------SCHHHHS---
T ss_pred eEEEEccCCCCCCeEECCCCcchhhheecc-eEEEEEeCCCccccc--ccccccc--cccchh-------hhhcccc---
Confidence 388999999999999999888888887777 799999999975421 1111000 001111 0112221
Q ss_pred CCCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchhhhHHHHHHHHHHhcc--CCCCCc-HHHHHHHHHHHHH
Q 003248 351 GVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQH--RKTSLS-HDKLLFGSVQAAI 427 (836)
Q Consensus 351 GIpv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~y~~~~--r~~~fs-~d~LL~~~A~~~~ 427 (836)
-..++++++|||.+++-.|=+|+++|..-+++...||....=++.-....+.=+..+ ..-.|| ++.|+|-+|..-+
T Consensus 263 -~~~~~v~l~pGE~LfIPsGWwH~V~nledsIait~NF~~~~nl~~~l~~~~~E~~~~v~~~~~~p~f~~~~w~~~~~~~ 341 (451)
T 2yu1_A 263 -SDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFLHSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYV 341 (451)
T ss_dssp -SCCEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEECCSSSHHHHHHHHHHHHHTTCCTTSSCTTHHHHHHHHHHHHH
T ss_pred -ccceEEEECCCcEEEeCCCceEEEecCCCeEEEeeeeCCcccHHHHHHHHHHHHhhCCCccccCccHHHHHHHHHHHHH
Confidence 256899999999999999999999999999999999998887776555443222222 333343 4688887777655
Q ss_pred HHH
Q 003248 428 KAL 430 (836)
Q Consensus 428 ~~l 430 (836)
..+
T Consensus 342 ~~~ 344 (451)
T 2yu1_A 342 YCI 344 (451)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 14
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=97.63 E-value=0.00011 Score=80.09 Aligned_cols=119 Identities=19% Similarity=0.142 Sum_probs=86.1
Q ss_pred cceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhc-----ChhhhhccccccCh
Q 003248 270 VPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEE-----QPDLLHELVTQLSP 344 (836)
Q Consensus 270 tP~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~-----~pd~L~h~~~~isP 344 (836)
..|+++|..+|.+.+|.+.....+++.+..| .|.|+.+|+.....+-. .+..... ..+++.. .-|
T Consensus 173 ~~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G-~K~~~L~pP~~~~~ly~-----~~~~~~~~~~~~~~~w~~~----~~P 242 (336)
T 3k2o_A 173 YRWFVMGPPRSGTGIHIDPLGTSAWNALVQG-HKRWCLFPTSTPRELIK-----VTRDEGGNQQDEAITWFNV----IYP 242 (336)
T ss_dssp CEEEEEECTTCEEEEECCGGGCEEEEEEEES-CEEEEEECTTSCHHHHC-----CCHHHHGGGTTCHHHHHHH----TGG
T ss_pred ceEEEECCCCccCCcccCCCccceeeEEEee-eEEEEEeCCCcchhccc-----CcccccCCCccchhhhhhh----hCc
Confidence 4588999999999999998888788888877 78899999997543321 1110000 0111111 112
Q ss_pred hhhhh---CCCCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchhhhHHH
Q 003248 345 SVLKA---EGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQ 398 (836)
Q Consensus 345 ~~L~~---~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dWL~~g~ 398 (836)
..-.. .+.+.+.++|+|||.+++-+|-+|++.|.+-+++.+.||.....++.-.
T Consensus 243 ~~~~~~~p~~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~~~ 299 (336)
T 3k2o_A 243 RTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVW 299 (336)
T ss_dssp GGGSTTSCGGGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHHHH
T ss_pred chhhhcccccCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHHHH
Confidence 21111 2567899999999999999999999999999999999999998877543
No 15
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.40 E-value=0.0013 Score=75.18 Aligned_cols=139 Identities=18% Similarity=0.129 Sum_probs=95.8
Q ss_pred ceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccChhhhhhC
Q 003248 271 PWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAE 350 (836)
Q Consensus 271 P~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~L~~~ 350 (836)
-|+++|+.+|.+.+|++-......+++..| -|+||.+||.... +. +.+... ..++ ...++. ..+
T Consensus 298 rf~lmg~~gS~Td~HiD~~gts~w~~v~~G-rK~w~L~PPt~~n-l~-~y~~w~-----~s~~----~~~wfg-d~l--- 361 (528)
T 3pur_A 298 QFCLAGMAGSYTDFHVDFGGSSVYYHILKG-EKIFYIAAPTEQN-FA-AYQAHE-----TSPD----TTTWFG-DIA--- 361 (528)
T ss_dssp SEEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHH-HH-HHHHHH-----HSSC----CSCCGG-GGT---
T ss_pred EEEEEeCCCCCCCeeECCCCCceeEEEecc-eEEEEEeCCCccc-hh-hhhhhc-----cCCc----hhhhhc-ccc---
Confidence 489999999999999988877777777777 8999999998543 11 111111 0111 111221 112
Q ss_pred CCCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccchhhhHHHHHHHH--H--HhccCCC--CC-cHHHHHHHHH
Q 003248 351 GVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVEL--Y--SEQHRKT--SL-SHDKLLFGSV 423 (836)
Q Consensus 351 GIpv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~--y--~~~~r~~--~f-s~d~LL~~~A 423 (836)
...+++++|+|||.+++-+|-+|+++|.--+++..-||.+..=|+.....++. + +..+.+. .| -++.|+|-.+
T Consensus 362 ~~~~~~v~l~pGEtlfIPsGW~HaV~tleDSIaiggNFl~~~nl~~qlri~~iE~~~~k~~~~~~kf~fp~F~~v~W~y~ 441 (528)
T 3pur_A 362 NGAVKRVVIKEGQTLLIPAGWIHAVLTPVDSLVFGGNFLHLGNLEMQMRVYHLENAIRKEIRSEEKFYFPNFELLHWMYM 441 (528)
T ss_dssp TTCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCGGGHHHHHHHHHHHHHHHHHCCCTTCCCCTTHHHHHHHHH
T ss_pred cccEEEEEECCCCEEEecCCceEEEecCCCeEEEcCcccchhhHHHHHHHHHHHHhhhhccCCCccccCcCHHHHHHHHH
Confidence 13567999999999999999999999999999999999998887766554432 2 1122333 35 3477777766
Q ss_pred HH
Q 003248 424 QA 425 (836)
Q Consensus 424 ~~ 425 (836)
..
T Consensus 442 ~~ 443 (528)
T 3pur_A 442 RN 443 (528)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 16
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=97.31 E-value=0.00064 Score=67.88 Aligned_cols=105 Identities=15% Similarity=0.133 Sum_probs=71.9
Q ss_pred cceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccC---hhh
Q 003248 270 VPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLS---PSV 346 (836)
Q Consensus 270 tP~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~is---P~~ 346 (836)
.+++++|..+|.+.+|.+... .++.+..| .|.|..+|+.+...+ +|... ..+.. ...+. |+.
T Consensus 125 ~~~~wiG~~gs~t~~H~D~~~--n~~~qv~G-~K~w~L~pP~~~~~l-------~~~~~----~~~~~-~s~vd~~~~d~ 189 (235)
T 4gjz_A 125 TINAWFGPQGTISPLHQDPQQ--NFLVQVMG-RKYIRLYSPQESGAL-------YPHDT----HLLHN-TSQVDVENPDL 189 (235)
T ss_dssp EEEEEEECTTCEEEEECCSSE--EEEEEEES-CEEEEEECGGGGGGS-------CBCSS----TTTTT-BBSSCTTSCCT
T ss_pred ceEEEEeCCCCCceeeecccc--ceEEEEee-eEeeEEcCccccccc-------ccCcc----cccCc-cccccccCcch
Confidence 468999999999999988753 45555666 899999999876532 22110 00000 01111 110
Q ss_pred ---hhhCCCCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccc
Q 003248 347 ---LKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVA 389 (836)
Q Consensus 347 ---L~~~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA 389 (836)
=.-.+.+.+.++|+|||.+++=++-+|.+.|.+.+++.+++|+
T Consensus 190 ~~~p~~~~~~~~~~~l~pGD~LyiP~gW~H~V~~l~~sisvn~w~s 235 (235)
T 4gjz_A 190 EKFPKFAKAPFLSCILSPGEILFIPVKYWHYVRALDLSFSVSFWWS 235 (235)
T ss_dssp TTCGGGGGCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEC
T ss_pred hhCccccCCCcEEEEECCCCEEEeCCCCcEEEEECCCEEEEEEecC
Confidence 0113467899999999999999999999999999887776663
No 17
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=96.21 E-value=0.017 Score=62.97 Aligned_cols=112 Identities=17% Similarity=0.012 Sum_probs=73.0
Q ss_pred cccceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccChhh-
Q 003248 268 VLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSV- 346 (836)
Q Consensus 268 V~tP~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~- 346 (836)
+...++++|..+|.+.+|.+.+ ..++.+..| .|.|..+|+.+...+ ++..... +..-...+.+..|+.
T Consensus 182 ~~~~~l~iG~~gs~t~~H~D~~--~n~~~qv~G-~K~~~L~pP~~~~~l-------y~~~~~~-~~~~~s~vd~~~~d~~ 250 (349)
T 3d8c_A 182 LTSNLLLIGMEGNVTPAHYGEQ--QNFFAQIKG-YKRCILFPPDQFECL-------YPYPVHH-PCDRQSQVDFDNPDYE 250 (349)
T ss_dssp EEECEEEEECTTCEEEEECCSE--EEEEEEEES-CEEEEEECGGGHHHH-------CBBCTTS-TTBTBBCSCTTSCCTT
T ss_pred cccceEEEECCCCCccceECCh--hcEEEEEec-eEEEEEeCcchhhhh-------ccccccC-CCCCcccccCCCcchh
Confidence 4556899999999999998765 456666667 899999999986533 2210000 000000000111110
Q ss_pred --hhhCCCCeeEeecCCCcEEEEcCCcceeeeecc-cceeeeecccc
Q 003248 347 --LKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCG-FNCAEAVNVAP 390 (836)
Q Consensus 347 --L~~~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~G-fN~aEAVNFA~ 390 (836)
-.-...+.+.++++|||.+++-+|-+|.+.|.+ -.++.||||-.
T Consensus 251 ~~p~~~~~~~~~~~l~pGD~LyiP~gWwH~V~~l~d~~~sisvn~w~ 297 (349)
T 3d8c_A 251 RFPNFQNVVGYETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWY 297 (349)
T ss_dssp TCGGGGGCCEEEEEECTTCEEEECTTCEEEEEECTTSCCEEEEEEEE
T ss_pred hCcccccCCcEEEEECCCCEEEECCCCcEEEEEcCCCCcEEEEEEEc
Confidence 011235789999999999999999999999997 45667777643
No 18
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=95.96 E-value=0.015 Score=62.98 Aligned_cols=111 Identities=11% Similarity=-0.009 Sum_probs=74.8
Q ss_pred cccceEEeecccccccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhh-cChhhhhccccccChhh
Q 003248 268 VLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFE-EQPDLLHELVTQLSPSV 346 (836)
Q Consensus 268 V~tP~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~-~~pd~L~h~~~~isP~~ 346 (836)
+...++++|..++.+.+|.+..+ .++.+..| .|.|...|+.+...+ ++.--. ...++- ....-.-|.
T Consensus 166 ~~~s~l~~g~~g~~~~~H~D~~~--n~~~qv~G-~K~w~L~pP~~~~~l-------y~~~~~~~~~d~~-~~d~~~~p~- 233 (338)
T 3al5_A 166 FFSSVFRISSPGLQLWTHYDVMD--NLLIQVTG-KKRVVLFSPRDAQYL-------YLKGTKSEVLNID-NPDLAKYPL- 233 (338)
T ss_dssp EEEEEEEEECTTCEEEEECCSSE--EEEEECSS-CEEEEEECGGGGGGG-------TEETTEESCCCSS-SCCTTTCTT-
T ss_pred cccceeEECCCCCCccceECCcc--cEEEEEEE-EEEEEEECccccccc-------ccCCCCcccccCC-CcchhhCcc-
Confidence 44568999999999999987753 44455556 899999999875432 111000 000000 000001122
Q ss_pred hhhCCCCeeEeecCCCcEEEEcCCcceeeeecccceeeeeccccch
Q 003248 347 LKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVD 392 (836)
Q Consensus 347 L~~~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~GfN~aEAVNFA~~d 392 (836)
+. +.+.+.++++|||.+++=+|-+|.+.|.+.+++.+++|....
T Consensus 234 ~~--~~~~~~~~L~pGD~LyiP~gWwH~v~~l~~sisvn~~~~~~~ 277 (338)
T 3al5_A 234 FS--KARRYECSLEAGDVLFIPALWFHNVISEEFGVGVNIFWKHLP 277 (338)
T ss_dssp GG--GCCEEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECSSC
T ss_pred cc--cCCCEEEEECCCCEEEECCCCeEEEeeCCCEEEEEEEecCCc
Confidence 22 347899999999999999999999999999999998886543
No 19
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=89.75 E-value=1.3 Score=47.99 Aligned_cols=116 Identities=16% Similarity=0.103 Sum_probs=72.5
Q ss_pred ceEEeecccccccccccCccceeeeeeeeCCceeEEEe-CcccHHHHHHHHHHhcchhhhc----ChhhhhccccccChh
Q 003248 271 PWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGV-PGSHASTLEKAMRKHLPDLFEE----QPDLLHELVTQLSPS 345 (836)
Q Consensus 271 P~LYiGM~fStf~WH~ED~~L~SINYlH~GapKiWY~V-P~~~a~kFE~l~k~~~p~~f~~----~pd~L~h~~~~isP~ 345 (836)
+.+|+|-.++.+..|.+.++ .+..+-.| .|.|... |+.....+ .+..... ..++......-+ |.
T Consensus 143 ~~~~~gp~g~~~~~H~D~~d--nfl~Qv~G-~Krw~L~~~P~~~~~l-------~~~~~~~~~~~~~~~~~~~~~~~-p~ 211 (342)
T 1vrb_A 143 AIVYAAKNGGGFKAHFDAYT--NLIFQIQG-EKTWKLAKNENVSNPM-------QHYDLSEAPYYPDDLQSYWKGDP-PK 211 (342)
T ss_dssp EEEEEECSSCCCCSEECSSE--EEEEEEES-CEEEEEECCSSCSSCS-------SCEECC----CCHHHHHHCCSCC-CC
T ss_pred ceEEEeCCCCCCCCeECChh--cEEEEEEE-EEEEEEecCCcccccc-------Ccccccccccccccccccchhhc-cc
Confidence 45999988999999998765 22333345 8999999 77632110 1100000 000000000000 11
Q ss_pred hhhhCCCCeeEeecCCCcEEEEcCCcceeeeecc--cceeeeeccccchhhhHHHHHHH
Q 003248 346 VLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCG--FNCAEAVNVAPVDWLAHGQQAVE 402 (836)
Q Consensus 346 ~L~~~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~G--fN~aEAVNFA~~dWL~~g~~a~e 402 (836)
+ ...+.+.++-+|||.+++-+|.+|.+.+.| -+++-+++ .+.|..+...+..
T Consensus 212 -~--~~~~~~~~~L~pGD~LyiP~gwwH~v~s~~~~~slsvsi~--~~~~~dll~~~l~ 265 (342)
T 1vrb_A 212 -E--DLPDAEIVNLTPGTMLYLPRGLWHSTKSDQATLALNITFG--QPAWLDLMLAALR 265 (342)
T ss_dssp -T--TCCSSEEEEECTTCEEEECTTCEEEEECSSCEEEEEEEEC--CCBHHHHHHHHHH
T ss_pred -c--ccCCceEEEECCCcEEEeCCCccEEEEECCCCceEEEEEC--CCcHHHHHHHHHH
Confidence 1 226789999999999999999999999994 67777777 7789887665443
No 20
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=81.65 E-value=7.3 Score=44.54 Aligned_cols=106 Identities=17% Similarity=0.154 Sum_probs=74.2
Q ss_pred cceEEeeccccc-ccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccChhhhh
Q 003248 270 VPWLYVGMCFSS-FCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLK 348 (836)
Q Consensus 270 tP~LYiGM~fSt-f~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~L~ 348 (836)
.--+|++-.+|. |..|.++++. +...-.| .|.|...++.+... .+|.. ..++ +.+.
T Consensus 165 ~~N~Y~tp~Gs~g~~pH~D~~Dv--FllQv~G-~KrWrL~~P~~~~~-------~lp~~--~~~~--------~~~~--- 221 (489)
T 4diq_A 165 GSNVYLTPPNSQGFAPHYDDIEA--FVLQLEG-RKLWRVYRPRAPTE-------ELALT--SSPN--------FSQD--- 221 (489)
T ss_dssp EEEEEEECSSBCCSCCBCCSSEE--EEEEEEE-CEEEEEECCSSGGG-------TTCSS--CCCC--------CCGG---
T ss_pred cceEEecCCCcccccCccCCcce--EEEEEee-EEEEEEeCCCCccc-------cCCCc--cccc--------CCcc---
Confidence 345899988884 7889999875 3344556 79999999876431 12221 1111 1222
Q ss_pred hCCCCeeEeecCCCcEEEEcCCcceeeeec--ccceeeeecccc-chhhhHHH
Q 003248 349 AEGVPVYHVVQHSGEFVLTFPRAYHSGFNC--GFNCAEAVNVAP-VDWLAHGQ 398 (836)
Q Consensus 349 ~~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~--GfN~aEAVNFA~-~dWL~~g~ 398 (836)
+.+-|++.++-+|||.+++-||..|.+.+. ++++.-++.+.. ..|.++-.
T Consensus 222 ~~~~p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~~~tw~dll~ 274 (489)
T 4diq_A 222 DLGEPVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQRNTWGDFLE 274 (489)
T ss_dssp GCCCCSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECTTCBHHHHHH
T ss_pred cccCcceEEEECCCCEEEECCCCceEEEecCCCceEEEeecccCcccHHHHHH
Confidence 246789999999999999999999999998 467777777653 67876544
No 21
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=57.95 E-value=57 Score=36.67 Aligned_cols=105 Identities=15% Similarity=0.126 Sum_probs=67.3
Q ss_pred ccceEEeeccccc-ccccccCccceeeeeeeeCCceeEEEeCcccHHHHHHHHHHhcchhhhcChhhhhccccccChhhh
Q 003248 269 LVPWLYVGMCFSS-FCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVL 347 (836)
Q Consensus 269 ~tP~LYiGM~fSt-f~WH~ED~~L~SINYlH~GapKiWY~VP~~~a~kFE~l~k~~~p~~f~~~pd~L~h~~~~isP~~L 347 (836)
....+|+|-.++. |..|.++++. +-.+-.| .|.|...|+.. -+|.. .. .- .|+
T Consensus 139 ~~~n~y~~~~g~~g~~~H~D~~dv--f~~Qv~G-~Krw~l~~p~~----------pl~~~----~s-----~d--~~~-- 192 (442)
T 2xdv_A 139 VGSNVYITPAGSQGLPPHYDDVEV--FILQLEG-EKHWRLYHPTV----------PLARE----YS-----VE--AEE-- 192 (442)
T ss_dssp CEEEEEEECTTCBCSCSEECSSEE--EEEEEES-CEEEEEECCSS----------TTCSS----CE-----EC--CTT--
T ss_pred cccceEECCCCCCCccceECCcce--EEEEEEe-EEEEEEccCCC----------Ccccc----CC-----CC--chh--
Confidence 4467899998875 5899977653 2233345 89999998864 11210 00 00 111
Q ss_pred hhCCCCeeEeecCCCcEEEEcCCcceeeeecc-cceeeeecc---ccchhhhHHHHH
Q 003248 348 KAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCG-FNCAEAVNV---APVDWLAHGQQA 400 (836)
Q Consensus 348 ~~~GIpv~r~vQ~pGEfVVTfPgaYHsgfn~G-fN~aEAVNF---A~~dWL~~g~~a 400 (836)
+.|-+.+.++-+|||.+++-||.+|.+.+.+ -..+..+.+ ....|.++-.++
T Consensus 193 -~~~~~~~~~~L~pGD~LYiP~g~~H~~~s~~~~~~SlhlT~~~~~~~~w~~~l~~~ 248 (442)
T 2xdv_A 193 -RIGRPVHEFMLKPGDLLYFPRGTIHQADTPAGLAHSTHVTISTYQNNSWGDFLLDT 248 (442)
T ss_dssp -TSCSCSEEEEECTTCEEEECTTCEEEEECCSSSCCEEEEEEEECTTCSHHHHHHHH
T ss_pred -hcCCcceEEEECCCcEEEECCCceEEEEecCCCcceeeccccccccchHHHHHHHH
Confidence 2356789999999999999999999999875 222332222 336687765433
No 22
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=28.65 E-value=18 Score=30.65 Aligned_cols=37 Identities=22% Similarity=0.510 Sum_probs=28.9
Q ss_pred ccccccccchhhhccccccccCCccccccchh-hhcCCCC
Q 003248 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHAN-IFCSCEI 530 (836)
Q Consensus 492 er~C~~Ck~~cfLS~V~C~C~~~~v~CL~Ha~-~lCsC~~ 530 (836)
...|..|+.-+-|..+.|.|. .++|..|-. +...|.-
T Consensus 15 ~~rC~~C~kkvgl~~f~CrCg--~~FC~~HRy~e~H~C~f 52 (64)
T 1wfh_A 15 PNRCTVCRKRVGLTGFMCRCG--TTFCGSHRYPEVHGCTF 52 (64)
T ss_dssp CCCCTTTCCCCCTTCEECSSS--CEECTTTCSTTTTTCCC
T ss_pred CCcChhhCCccCccCEEeecC--CEeccccCCcccCCCCc
Confidence 468999999988889999886 689999953 3355653
No 23
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=26.59 E-value=21 Score=30.18 Aligned_cols=37 Identities=27% Similarity=0.592 Sum_probs=28.7
Q ss_pred ccccccccchhhhccccccccCCccccccchh-hhcCCCC
Q 003248 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHAN-IFCSCEI 530 (836)
Q Consensus 492 er~C~~Ck~~cfLS~V~C~C~~~~v~CL~Ha~-~lCsC~~ 530 (836)
...|..|+.-+-|..+.|.|. .++|..|-. +...|.-
T Consensus 15 ~~rC~~C~kkvgl~~f~CrCg--~~FC~~HR~~e~H~C~f 52 (64)
T 1wg2_A 15 NNRCFSCNKKVGVMGFKCKCG--STFCGSHRYPEKHECSF 52 (64)
T ss_dssp SCSCTTTCCCCTTSCEECTTS--CEECSSSCSSTTTTCCC
T ss_pred CCcChhhCCcccccCeEeecC--CEecccCCCccccCCCc
Confidence 458999999988888999886 689999953 3355653
No 24
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=26.50 E-value=22 Score=30.90 Aligned_cols=38 Identities=24% Similarity=0.581 Sum_probs=29.5
Q ss_pred cccccccccchhhhccccccccCCccccccchh-hhcCCCC
Q 003248 491 TERECFSCFYDLHLSAAGCKCSPDRFACLKHAN-IFCSCEI 530 (836)
Q Consensus 491 ~er~C~~Ck~~cfLS~V~C~C~~~~v~CL~Ha~-~lCsC~~ 530 (836)
....|..|+.-+-|..+.|.|. .++|..|-. +...|.-
T Consensus 24 ~~~RC~~C~kkvgL~~f~CrCg--~~FCs~HRy~e~H~C~f 62 (74)
T 1wfp_A 24 TATRCLSCNKKVGVTGFKCRCG--STFCGTHRYPESHECQF 62 (74)
T ss_dssp CCCBCSSSCCBCTTTCEECTTS--CEECTTTCSTTTSCCCS
T ss_pred cCccchhhcCcccccceEeccC--CEeccccCCCcCCCCcC
Confidence 3568999999999989999886 689999953 3355654
No 25
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=25.19 E-value=53 Score=28.71 Aligned_cols=43 Identities=14% Similarity=-0.048 Sum_probs=27.9
Q ss_pred ecCCCcEEEEcCCcceeeeecccceeee--eccccchhhhHHHHH
Q 003248 358 VQHSGEFVLTFPRAYHSGFNCGFNCAEA--VNVAPVDWLAHGQQA 400 (836)
Q Consensus 358 vQ~pGEfVVTfPgaYHsgfn~GfN~aEA--VNFA~~dWL~~g~~a 400 (836)
.-.||+++++-|+.-|+..|.|-.-.+. +.+..+.++-..+++
T Consensus 69 ~l~~Gd~i~ip~~~~H~~~~~~~~~~~~l~i~~~~~~~~~~~~~~ 113 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAPHPKKLNAPEDP 113 (117)
T ss_dssp EEETTCEEEECTTCEEEEECCSSSEEEEEEEECSCGGGGCC----
T ss_pred EeCCCCEEEECCCCcEEeEcCCCCCEEEEEEECCCCCCCCccccc
Confidence 4579999999999999999988753333 334445554433333
No 26
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=23.90 E-value=24 Score=31.39 Aligned_cols=37 Identities=24% Similarity=0.575 Sum_probs=28.4
Q ss_pred ccccccccchhhhc-cccccccCCccccccchh-hhcCCCC
Q 003248 492 ERECFSCFYDLHLS-AAGCKCSPDRFACLKHAN-IFCSCEI 530 (836)
Q Consensus 492 er~C~~Ck~~cfLS-~V~C~C~~~~v~CL~Ha~-~lCsC~~ 530 (836)
...|..|+.-+-|. .+.|.|. .++|..|-. +...|.-
T Consensus 25 ~~rC~~C~kkvgl~~~f~CrCg--~~FC~~HRy~e~H~C~f 63 (85)
T 1wff_A 25 MKHCFLCGKKTGLATSFECRCG--NNFCASHRYAEAHGCNY 63 (85)
T ss_dssp CCBCSSSCCBCSSSSCEECTTC--CEECTTTCSTGGGTCCS
T ss_pred CccchhhCCeecccCCeEcCCC--CEecccCCCccCCCCcc
Confidence 46899999998885 8999986 689999952 3345653
No 27
>1wfl_A Zinc finger protein 216; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=23.84 E-value=29 Score=30.14 Aligned_cols=36 Identities=25% Similarity=0.635 Sum_probs=28.0
Q ss_pred ccccccccchhhhccccccccCCccccccchh-hhcCCC
Q 003248 492 ERECFSCFYDLHLSAAGCKCSPDRFACLKHAN-IFCSCE 529 (836)
Q Consensus 492 er~C~~Ck~~cfLS~V~C~C~~~~v~CL~Ha~-~lCsC~ 529 (836)
...|..|+.-+=|..+.|.|. .++|..|-. +...|.
T Consensus 25 ~nRC~~CrKkvgL~gf~CrCg--~~FCs~HRy~e~H~C~ 61 (74)
T 1wfl_A 25 KNRCFMCRKKVGLTGFDCRCG--NLFCGLHRYSDKHNCP 61 (74)
T ss_dssp TTBCSSSCCBCGGGCEECTTS--CEECSSSCSTTTTTCC
T ss_pred CCcChhhCCcccccCeecCCC--CEechhcCCCccCCCc
Confidence 358999999988888999986 689999953 234564
No 28
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=20.75 E-value=87 Score=27.01 Aligned_cols=24 Identities=17% Similarity=0.141 Sum_probs=21.9
Q ss_pred EeecCCCcEEEEcCCcceeeeecc
Q 003248 356 HVVQHSGEFVLTFPRAYHSGFNCG 379 (836)
Q Consensus 356 r~vQ~pGEfVVTfPgaYHsgfn~G 379 (836)
...-.||+++++-|+..|...|.|
T Consensus 73 ~~~l~~Gd~~~ip~~~~H~~~~~~ 96 (116)
T 2pfw_A 73 IKVLTAGDSFFVPPHVDHGAVCPT 96 (116)
T ss_dssp EEEECTTCEEEECTTCCEEEEESS
T ss_pred EEEeCCCCEEEECcCCceeeEeCC
Confidence 556789999999999999999998
Done!