Your job contains 1 sequence.
>003250
MAMVIQQQQQQQRESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLI
RECPILSNIEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVS
QLVCENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKAT
GTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDC
RSLEVFTMFPAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERSLSGS
GAGPNPASAAQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKV
VAQRMTIAETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI
IAVNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDA
YSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRD
IHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAH
RTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVI
SSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSV
LKNLWQHSDAILCCSLKSMPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALCAD
FAKLMQQGFTYLPAGICMSTMGRHVSYEQAVAWKVLAPEDNTVHCLAFSFINWSFV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003250
(836 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2175856 - symbol:REV "AT5G60690" species:3702 ... 3527 0. 1
TAIR|locus:2061544 - symbol:PHB "AT2G34710" species:3702 ... 2889 5.3e-301 1
TAIR|locus:2028140 - symbol:PHV "AT1G30490" species:3702 ... 2783 9.1e-290 1
TAIR|locus:2034086 - symbol:ATHB-15 "AT1G52150" species:3... 2743 1.6e-285 1
TAIR|locus:2134088 - symbol:HB-8 "AT4G32880" species:3702... 2670 8.6e-278 1
TAIR|locus:2135368 - symbol:PDF2 "AT4G04890" species:3702... 164 2.1e-19 4
TAIR|locus:2119048 - symbol:ATML1 "AT4G21750" species:370... 161 6.4e-19 4
TAIR|locus:2207235 - symbol:HDG2 "AT1G05230" species:3702... 161 7.6e-16 3
TAIR|locus:2097770 - symbol:HDG8 "AT3G03260" species:3702... 157 3.1e-12 2
TAIR|locus:2206880 - symbol:HDG11 "AT1G73360" species:370... 160 1.0e-11 4
TAIR|locus:2127008 - symbol:ANL2 "ANTHOCYANINLESS 2" spec... 139 1.8e-11 3
TAIR|locus:2129396 - symbol:HDG4 "AT4G17710" species:3702... 134 1.9e-11 3
TAIR|locus:2062540 - symbol:HDG3 "AT2G32370" species:3702... 154 2.6e-11 3
TAIR|locus:2145116 - symbol:HDG7 "AT5G52170" species:3702... 141 1.5e-10 3
TAIR|locus:2030913 - symbol:HDG12 "homeodomain GLABROUS 1... 142 3.2e-10 3
TAIR|locus:2098866 - symbol:HDG1 "AT3G61150" species:3702... 144 6.3e-10 5
TAIR|locus:2167230 - symbol:HDG9 "AT5G17320" species:3702... 164 1.4e-09 3
TAIR|locus:2023932 - symbol:HDG10 "AT1G34650" species:370... 129 5.4e-06 3
TAIR|locus:2170194 - symbol:HAT14 "homeobox from Arabidop... 136 8.1e-06 1
TAIR|locus:2205075 - symbol:ATHB13 species:3702 "Arabidop... 128 4.6e-05 1
RGD|2320224 - symbol:LOC100364841 "rCG53272-like" species... 107 6.8e-05 1
TAIR|locus:2202795 - symbol:AtHB23 "homeobox protein 23" ... 124 8.9e-05 1
TAIR|locus:2144578 - symbol:HB51 "homeobox 51" species:37... 123 9.0e-05 1
TAIR|locus:2103396 - symbol:HAT3 "homeobox-leucine zipper... 126 9.1e-05 1
TAIR|locus:2115215 - symbol:HB40 "homeobox protein 40" sp... 121 0.00011 1
MGI|MGI:1277163 - symbol:Vax1 "ventral anterior homeobox ... 125 0.00014 1
TAIR|locus:2079542 - symbol:HB-12 "homeobox 12" species:3... 121 0.00015 1
TAIR|locus:2055028 - symbol:HB4 "homeobox-leucine zipper ... 124 0.00015 1
MGI|MGI:2153518 - symbol:Dmbx1 "diencephalon/mesencephalo... 113 0.00023 2
TAIR|locus:2084228 - symbol:HB-1 "homeobox 1" species:370... 121 0.00023 1
UNIPROTKB|F1N959 - symbol:F1N959 "Uncharacterized protein... 115 0.00025 2
UNIPROTKB|F1NZI9 - symbol:PRRX2 "Paired mesoderm homeobox... 112 0.00026 1
UNIPROTKB|H9L2C7 - symbol:LHX4 "Uncharacterized protein" ... 119 0.00027 1
TAIR|locus:2129136 - symbol:HB-2 "homeobox protein 2" spe... 120 0.00033 1
UNIPROTKB|D6RBJ1 - symbol:ISL1 "Insulin gene enhancer pro... 115 0.00034 2
TAIR|locus:2062754 - symbol:HB-7 "homeobox 7" species:370... 119 0.00034 1
FB|FBgn0002023 - symbol:Lim3 "Lim3" species:7227 "Drosoph... 124 0.00037 1
UNIPROTKB|E1BWH2 - symbol:E1BWH2 "Uncharacterized protein... 115 0.00039 2
TAIR|locus:2150901 - symbol:HB-3 "homeobox 3" species:370... 120 0.00042 1
UNIPROTKB|P50211 - symbol:ISL1 "Insulin gene enhancer pro... 115 0.00043 2
UNIPROTKB|A6H796 - symbol:ISL1 "ISL1 protein" species:991... 115 0.00043 2
UNIPROTKB|P61371 - symbol:ISL1 "Insulin gene enhancer pro... 115 0.00043 2
MGI|MGI:101791 - symbol:Isl1 "ISL1 transcription factor, ... 115 0.00043 2
RGD|61957 - symbol:Isl1 "ISL LIM homeobox 1" species:1011... 115 0.00043 2
ZFIN|ZDB-GENE-980526-112 - symbol:isl1 "islet1" species:7... 115 0.00043 2
UNIPROTKB|Q5SQQ9 - symbol:VAX1 "Ventral anterior homeobox... 120 0.00047 1
UNIPROTKB|F1SMF7 - symbol:ISL1 "Uncharacterized protein" ... 115 0.00048 2
UNIPROTKB|F6QGM2 - symbol:LHX3 "LIM/homeobox protein Lhx3... 115 0.00055 1
UNIPROTKB|P53412 - symbol:LHX3 "LIM/homeobox protein Lhx3... 120 0.00064 1
UNIPROTKB|P36200 - symbol:lhx3 "LIM/homeobox protein Lhx3... 120 0.00064 1
ZFIN|ZDB-GENE-980526-131 - symbol:lhx3 "LIM homeobox 3" s... 120 0.00065 1
MGI|MGI:95843 - symbol:Gsx2 "GS homeobox 2" species:10090... 118 0.00066 1
ZFIN|ZDB-GENE-030904-8 - symbol:vax2 "ventral anterior ho... 118 0.00067 1
UNIPROTKB|F1S681 - symbol:LHX4 "Uncharacterized protein" ... 119 0.00073 1
UNIPROTKB|E1C654 - symbol:VAX1 "Ventral anterior homeobox... 114 0.00078 1
UNIPROTKB|F1P5G0 - symbol:VAX1 "Ventral anterior homeobox... 114 0.00079 1
UNIPROTKB|E2QUC0 - symbol:VAX1 "Uncharacterized protein" ... 118 0.00079 1
UNIPROTKB|F1NL45 - symbol:MIXL1 "Uncharacterized protein"... 97 0.00079 1
RGD|621132 - symbol:Vax1 "ventral anterior homeobox 1" sp... 118 0.00080 1
UNIPROTKB|Q9JM00 - symbol:Vax1 "Ventral anterior homeobox... 118 0.00080 1
UNIPROTKB|F1MFM7 - symbol:LHX4 "Uncharacterized protein" ... 119 0.00081 1
UNIPROTKB|Q969G2 - symbol:LHX4 "LIM/homeobox protein Lhx4... 119 0.00081 1
MGI|MGI:101776 - symbol:Lhx4 "LIM homeobox protein 4" spe... 119 0.00081 1
UNIPROTKB|F1PCI5 - symbol:LHX4 "Uncharacterized protein" ... 119 0.00082 1
UNIPROTKB|P53410 - symbol:ISL2 "Insulin gene enhancer pro... 112 0.00084 2
TAIR|locus:2059143 - symbol:HAT9 species:3702 "Arabidopsi... 116 0.00086 1
TAIR|locus:2173669 - symbol:HB53 "homeobox 53" species:37... 114 0.00088 1
ZFIN|ZDB-GENE-990415-133 - symbol:isl2b "islet2b" species... 115 0.00094 2
UNIPROTKB|Q9UIW0 - symbol:VAX2 "Ventral anterior homeobox... 110 0.00096 2
MGI|MGI:1346018 - symbol:Vax2 "ventral anterior homeobox ... 110 0.00099 2
UNIPROTKB|D6RAK3 - symbol:ISL1 "Insulin gene enhancer pro... 115 0.00099 1
>TAIR|locus:2175856 [details] [associations]
symbol:REV "AT5G60690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0008289 "lipid binding" evidence=ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0010014
"meristem initiation" evidence=RCA;IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA;IMP] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA;IMP] [GO:0009944 "polarity
specification of adaxial/abaxial axis" evidence=RCA;IMP]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0010075 "regulation of meristem growth"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 EMBL:AB005246 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 GO:GO:0010051 GO:GO:0009855
GO:GO:0009944 KO:K09338 HSSP:P10037 ProtClustDB:CLSN2679470
InterPro:IPR013978 Pfam:PF08670 GO:GO:0009956 GO:GO:0010014
EMBL:AF188994 EMBL:AY170127 EMBL:AF233592 EMBL:AK229564
EMBL:EF598684 EMBL:EF598685 EMBL:EF598686 EMBL:EF598687
EMBL:EF598688 EMBL:EF598689 EMBL:EF598690 EMBL:EF598691
EMBL:EF598692 EMBL:EF598693 EMBL:EF598694 EMBL:EF598695
EMBL:EF598696 EMBL:EF598697 EMBL:EF598698 EMBL:EF598699
EMBL:EF598700 EMBL:EF598701 EMBL:EF598702 EMBL:EF598703
EMBL:EF598704 EMBL:EF598705 EMBL:EF598706 IPI:IPI00531930
RefSeq:NP_200877.1 UniGene:At.49201 UniGene:At.7238
ProteinModelPortal:Q9SE43 SMR:Q9SE43 STRING:Q9SE43 PaxDb:Q9SE43
PRIDE:Q9SE43 EnsemblPlants:AT5G60690.1 GeneID:836190
KEGG:ath:AT5G60690 TAIR:At5g60690 eggNOG:NOG323815
InParanoid:Q9M5B6 OMA:TIELVYM PhylomeDB:Q9SE43
Genevestigator:Q9SE43 Uniprot:Q9SE43
Length = 842
Score = 3527 (1246.6 bits), Expect = 0., P = 0.
Identities = 684/839 (81%), Positives = 747/839 (89%)
Query: 13 RESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPK 72
RE SS S+N+H +GKYVRYTAEQVEALERVY+ECPKPSSLRRQQLIREC IL+NIEPK
Sbjct: 9 RERSSDSMNRHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECSILANIEPK 68
Query: 73 QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
QIKVWFQNRRCR+KQRKEASRLQ+VNRKL+AMNKLLMEENDRLQKQVSQLVCENGYMKQQ
Sbjct: 69 QIKVWFQNRRCRDKQRKEASRLQSVNRKLSAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 128
Query: 133 LRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 192
L T D SC+SVVTTPQHSLRDAN+PAGLLSIAEETLAEFLSKATGTAVDWVQMPGM
Sbjct: 129 LTTV--VNDPSCESVVTTPQHSLRDANSPAGLLSIAEETLAEFLSKATGTAVDWVQMPGM 186
Query: 193 KPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAG 252
KPGPDSVGIFAISQ C+GVAARACGLVSLEP KIAEILKDRPSWFRDCRSLEVFTMFPAG
Sbjct: 187 KPGPDSVGIFAISQRCNGVAARACGLVSLEPMKIAEILKDRPSWFRDCRSLEVFTMFPAG 246
Query: 253 NAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQF 312
N GTIEL+Y Q YAPTTLAPARDFWTLRYTT+LDNGS VVCER QF
Sbjct: 247 NGGTIELVYMQTYAPTTLAPARDFWTLRYTTSLDNGSFVVCERSLSGSGAGPNAASASQF 306
Query: 313 VRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA---- 368
VRAEML SG LIRPCDGGGSIIHIVDHLNLEAWSVP+VLRPLYESSKVVAQ+MTI+
Sbjct: 307 VRAEMLSSGYLIRPCDGGGSIIHIVDHLNLEAWSVPDVLRPLYESSKVVAQKMTISALRY 366
Query: 369 ------ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIA 422
E++GEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGF DDGWS M CDGAED+I+A
Sbjct: 367 IRQLAQESNGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFGDDGWSTMHCDGAEDIIVA 426
Query: 423 VNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYS 482
+NSTK L+ N +NSL+FLGG+LCAKASMLLQNVPPA+L+RFLREHRSEWADFNVDAYS
Sbjct: 427 INSTKHLN---NISNSLSFLGGVLCAKASMLLQNVPPAVLIRFLREHRSEWADFNVDAYS 483
Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
AA+LKAGS+AYPGMRPTRFTGSQIIMPLGHTIEHEE+LEV+RLEGHSLAQEDAF+SRD+H
Sbjct: 484 AATLKAGSFAYPGMRPTRFTGSQIIMPLGHTIEHEEMLEVVRLEGHSLAQEDAFMSRDVH 543
Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTA-HR 601
LLQIC+G+DENAVGACSEL+FAPI+EMFPDD PL+PSGFR+IP+D+KT D D LTA HR
Sbjct: 544 LLQICTGIDENAVGACSELIFAPINEMFPDDAPLVPSGFRVIPVDAKTGDVQDLLTANHR 603
Query: 602 TLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
TLDLTSSLEVGP+ A+G+S S +R +LTIAFQFPFE+NLQ+NVA MA QYVRSVIS
Sbjct: 604 TLDLTSSLEVGPSPENASGNSFSSSSSRCILTIAFQFPFENNLQENVAGMACQYVRSVIS 663
Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGD-SV 720
SVQRVAMAI PSG+SP+LG KLSPGSPEA+TLA WI QSYS+HLG+ELL DS+G D SV
Sbjct: 664 SVQRVAMAISPSGISPSLGSKLSPGSPEAVTLAQWISQSYSHHLGSELLTIDSLGSDDSV 723
Query: 721 LKNLWQHSDAILCCSLKSMPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALCAD 780
LK LW H DAILCCSLK PVF+FANQAGLDMLETTLVALQDITL+KIFDESGRKA+C+D
Sbjct: 724 LKLLWDHQDAILCCSLKPQPVFMFANQAGLDMLETTLVALQDITLEKIFDESGRKAICSD 783
Query: 781 FAKLMQQGFTYLPAGICMSTMGRHVSYEQAVAWKVLAPED---NTVHCLAFSFINWSFV 836
FAKLMQQGF LP+GIC+STMGRHVSYEQAVAWKV A + N +HCLAFSF+NWSFV
Sbjct: 784 FAKLMQQGFACLPSGICVSTMGRHVSYEQAVAWKVFAASEENNNNLHCLAFSFVNWSFV 842
>TAIR|locus:2061544 [details] [associations]
symbol:PHB "AT2G34710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0080060 "integument
development" evidence=IGI] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0009965 "leaf morphogenesis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010075 "regulation of meristem growth" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0010162
"seed dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010564 "regulation
of cell cycle process" evidence=RCA] [GO:0016049 "cell growth"
evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0033044 "regulation
of chromosome organization" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048589 "developmental growth" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0048825 "cotyledon development" evidence=RCA] [GO:0050826
"response to freezing" evidence=RCA] [GO:0051301 "cell division"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
[GO:0009955 "adaxial/abaxial pattern specification" evidence=IMP]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC003096
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009944 KO:K09338 EMBL:Y11122 EMBL:AJ441291
EMBL:AY099791 EMBL:BT000335 IPI:IPI00538463 PIR:T01364
RefSeq:NP_181018.1 UniGene:At.37771 HSSP:P10037
ProteinModelPortal:O04291 SMR:O04291 IntAct:O04291 STRING:O04291
PaxDb:O04291 PRIDE:O04291 EnsemblPlants:AT2G34710.1 GeneID:818036
KEGG:ath:AT2G34710 TAIR:At2g34710 eggNOG:NOG264261
HOGENOM:HOG000272677 InParanoid:O04291 OMA:NRKLNAM PhylomeDB:O04291
ProtClustDB:CLSN2679470 Genevestigator:O04291 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 Uniprot:O04291
Length = 852
Score = 2889 (1022.0 bits), Expect = 5.3e-301, P = 5.3e-301
Identities = 575/838 (68%), Positives = 661/838 (78%)
Query: 25 LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
LD+GKYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 21 LDSGKYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 80
Query: 85 EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT-DAS 143
EKQRKEA+RLQTVNRKL AMNKLLMEENDRLQKQVS LV ENG+MK QL TA TT D S
Sbjct: 81 EKQRKEAARLQTVNRKLNAMNKLLMEENDRLQKQVSNLVYENGHMKHQLHTASGTTTDNS 140
Query: 144 CDSVVTT----------PQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
C+SVV + PQH RDANNPAGLLSIAEE LAEFLSKATGTAVDWVQM GMK
Sbjct: 141 CESVVVSGQQHQQQNPNPQHQQRDANNPAGLLSIAEEALAEFLSKATGTAVDWVQMIGMK 200
Query: 194 PGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGN 253
PGPDS+GI AIS++CSG+AARACGLVSLEP K+AEILKDRPSW RDCRS++ ++ PAGN
Sbjct: 201 PGPDSIGIVAISRNCSGIAARACGLVSLEPMKVAEILKDRPSWLRDCRSVDTLSVIPAGN 260
Query: 254 AGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFV 313
GTIEL+YTQ YAPTTLA ARDFWTLRY+T L++GS VVCER FV
Sbjct: 261 GGTIELIYTQMYAPTTLAAARDFWTLRYSTCLEDGSYVVCERSLTSATGGPTGPPSSNFV 320
Query: 314 RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA----- 368
RAEM PSG LIRPCDGGGSI+HIVDH++L+AWSVPEV+RPLYESSK++AQ+MT+A
Sbjct: 321 RAEMKPSGFLIRPCDGGGSILHIVDHVDLDAWSVPEVMRPLYESSKILAQKMTVAALRHV 380
Query: 369 -----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAV 423
ETSGEV YG GRQPAVLRTFSQRL RGFNDAVNGF DDGWS M DGAEDV + +
Sbjct: 381 RQIAQETSGEVQYGGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMGSDGAEDVTVMI 440
Query: 424 NSTKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAY 481
N + S NS +F G+LCAKASMLLQNVPPA+LVRFLREHRSEWAD+ VDAY
Sbjct: 441 NLSPGKFGGSQYGNSFLPSFGSGVLCAKASMLLQNVPPAVLVRFLREHRSEWADYGVDAY 500
Query: 482 SAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDI 541
+AASL+A +A P R F +Q+I+PL T+EHEE LEV+RLEGH+ + ED ++RD+
Sbjct: 501 AAASLRASPFAVPCARAGGFPSNQVILPLAQTVEHEESLEVVRLEGHAYSPEDMGLARDM 560
Query: 542 HLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHR 601
+LLQ+CSGVDEN VG C++LVFAPIDE F DD PLLPSGFRIIPL+ K+ TP+ +A+R
Sbjct: 561 YLLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRIIPLEQKS--TPNGASANR 618
Query: 602 TLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS 661
TLDL S+LE G D + C+ RSVLTIAFQF F+++ +D+VA+MARQYVRS++
Sbjct: 619 TLDLASALE-GSTRQAGEADPNGCNF-RSVLTIAFQFTFDNHSRDSVASMARQYVRSIVG 676
Query: 662 SVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS-VGGDSV 720
S+QRVA+AI P S + P P SPEALTL WI +SYS H GA+L SDS GD++
Sbjct: 677 SIQRVALAIAPRPGS-NISPISVPTSPEALTLVRWISRSYSLHTGADLFGSDSQTSGDTL 735
Query: 721 LKNLWQHSDAILCCSLKS--MPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALC 778
L LW HSDAILCCSLK+ PVF FANQ GLDMLETTLVALQDI LDK DE GRKALC
Sbjct: 736 LHQLWNHSDAILCCSLKTNASPVFTFANQTGLDMLETTLVALQDIMLDKTLDEPGRKALC 795
Query: 779 ADFAKLMQQGFTYLPAGICMSTMGRHVSYEQAVAWKVLAPEDNTVHCLAFSFINWSFV 836
++F K+MQQG+ +LPAG+C S+MGR VSYEQA WKVL +D + HCLAF F+NWSFV
Sbjct: 796 SEFPKIMQQGYAHLPAGVCASSMGRMVSYEQATVWKVLE-DDESNHCLAFMFVNWSFV 852
>TAIR|locus:2028140 [details] [associations]
symbol:PHV "AT1G30490" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009943 "adaxial/abaxial axis specification"
evidence=IMP] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA;IMP] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA;IMP] [GO:0010014 "meristem
initiation" evidence=RCA;IMP] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009880 "embryonic pattern
specification" evidence=IGI] [GO:0080060 "integument development"
evidence=IGI] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010051
"xylem and phloem pattern formation" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010075 "regulation of
meristem growth" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:AC009917
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
GO:GO:0009855 GO:GO:0009880 GO:GO:0009944 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 EMBL:Y10922 EMBL:AJ440967
EMBL:AK221046 EMBL:AK226570 IPI:IPI00523245 PIR:H86429
RefSeq:NP_174337.1 UniGene:At.27961 UniGene:At.33151
ProteinModelPortal:O04292 SMR:O04292 IntAct:O04292 STRING:O04292
PRIDE:O04292 EnsemblPlants:AT1G30490.1 GeneID:839928
KEGG:ath:AT1G30490 TAIR:At1g30490 eggNOG:NOG326783
InParanoid:O04292 OMA:ICRSYRI PhylomeDB:O04292
Genevestigator:O04292 Uniprot:O04292
Length = 841
Score = 2783 (984.7 bits), Expect = 9.1e-290, P = 9.1e-290
Identities = 562/839 (66%), Positives = 655/839 (78%)
Query: 26 DNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCRE 85
D+GKYVRYT EQVEALERVY+ECPKPSSLRRQQLIRECPIL NIEP+QIKVWFQNRRCRE
Sbjct: 18 DSGKYVRYTPEQVEALERVYAECPKPSSLRRQQLIRECPILCNIEPRQIKVWFQNRRCRE 77
Query: 86 KQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATT-DASC 144
KQRKE++RLQTVNRKL+AMNKLLMEENDRLQKQVS LV ENG+MK ++ TA TT D SC
Sbjct: 78 KQRKESARLQTVNRKLSAMNKLLMEENDRLQKQVSNLVYENGFMKHRIHTASGTTTDNSC 137
Query: 145 DSVVT----------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKP 194
+SVV T QH RD NNPA LLSIAEETLAEFL KATGTAVDWVQM GMKP
Sbjct: 138 ESVVVSGQQRQQQNPTHQHPQRDVNNPANLLSIAEETLAEFLCKATGTAVDWVQMIGMKP 197
Query: 195 GPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
GPDS+GI A+S++CSG+AARACGLVSLEP K+AEILKDRPSWFRDCR +E + P GN
Sbjct: 198 GPDSIGIVAVSRNCSGIAARACGLVSLEPMKVAEILKDRPSWFRDCRCVETLNVIPTGNG 257
Query: 255 GTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFVR 314
GTIEL+ TQ YAPTTLA ARDFWTLRY+T+L++GS VVCER FVR
Sbjct: 258 GTIELVNTQIYAPTTLAAARDFWTLRYSTSLEDGSYVVCERSLTSATGGPNGPLSSSFVR 317
Query: 315 AEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ 368
A+ML SG LIRPCDGGGSIIHIVDH++L+ SVPEVLRPLYESSK++AQ+MT+A
Sbjct: 318 AKMLSSGFLIRPCDGGGSIIHIVDHVDLDVSSVPEVLRPLYESSKILAQKMTVAALRHVR 377
Query: 369 ----ETSGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVN 424
ETSGEV Y GRQPAVLRTFSQRL RGFNDAVNGF DDGWS M+ DG ED+ I +N
Sbjct: 378 QIAQETSGEVQYSGGRQPAVLRTFSQRLCRGFNDAVNGFVDDGWSPMSSDGGEDITIMIN 437
Query: 425 STKSLSTASNPTNSL--AFLGGILCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYS 482
S+ + S +S +F G+LCAKASMLLQNVPP +L+RFLREHR+EWAD+ VDAYS
Sbjct: 438 SSSAKFAGSQYGSSFLPSFGSGVLCAKASMLLQNVPPLVLIRFLREHRAEWADYGVDAYS 497
Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
AASL+A YA P +R F +Q+I+PL T+EHEE LEV+RL GH+ + ED +SRD++
Sbjct: 498 AASLRATPYAVPCVRTGGFPSNQVILPLAQTLEHEEFLEVVRLGGHAYSPEDMGLSRDMY 557
Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
LLQ+CSGVDEN VG C++LVFAPIDE F DD PLLPSGFR+IPLD KT + D +A RT
Sbjct: 558 LLQLCSGVDENVVGGCAQLVFAPIDESFADDAPLLPSGFRVIPLDQKT-NPNDHQSASRT 616
Query: 603 LDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISS 662
DL SSL+ T DS + ++R VLTIAFQF F+++ +DNVATMARQYVR+V+ S
Sbjct: 617 RDLASSLDGSTKT-----DSET--NSRLVLTIAFQFTFDNHSRDNVATMARQYVRNVVGS 669
Query: 663 VQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS--VGGDSV 720
+QRVA+AI P P G P SPEALTL WI +SYS H GA+L +DS GGD++
Sbjct: 670 IQRVALAITPR---P--GSMQLPTSPEALTLVRWITRSYSIHTGADLFGADSQSCGGDTL 724
Query: 721 LKNLWQHSDAILCCSLKS--MPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALC 778
LK LW HSDAILCCSLK+ PVF FANQAGLDMLETTLVALQDI LDK D+SGR+ALC
Sbjct: 725 LKQLWDHSDAILCCSLKTNASPVFTFANQAGLDMLETTLVALQDIMLDKTLDDSGRRALC 784
Query: 779 ADFAKLMQQGFTYLPAGICMSTMGRHVSYEQAVAWKVLAPEDN-TVHCLAFSFINWSFV 836
++FAK+MQQG+ LPAGIC+S+MGR VSYEQA WKV+ +DN + HCLAF+ ++WSFV
Sbjct: 785 SEFAKIMQQGYANLPAGICVSSMGRPVSYEQATVWKVV--DDNESNHCLAFTLVSWSFV 841
>TAIR|locus:2034086 [details] [associations]
symbol:ATHB-15 "AT1G52150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;TAS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA;IMP]
[GO:0010014 "meristem initiation" evidence=RCA;IMP] [GO:0009887
"organ morphogenesis" evidence=RCA;IMP] [GO:0010073 "meristem
maintenance" evidence=RCA;TAS] [GO:0010075 "regulation of meristem
growth" evidence=RCA;IMP] [GO:0010087 "phloem or xylem
histogenesis" evidence=IMP] [GO:0048263 "determination of dorsal
identity" evidence=IMP] [GO:0080060 "integument development"
evidence=IGI] [GO:0006995 "cellular response to nitrogen
starvation" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010089 "xylem development" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684 GO:GO:0005634
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0009965 GO:GO:0010087 KO:K09338
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 GO:GO:0080060
InterPro:IPR013978 Pfam:PF08670 GO:GO:0010075 GO:GO:0048263
EMBL:AC006216 GO:GO:0010014 IPI:IPI00545601 RefSeq:NP_849795.1
UniGene:At.11011 ProteinModelPortal:B3H4G8 SMR:B3H4G8 STRING:B3H4G8
PRIDE:B3H4G8 EnsemblPlants:AT1G52150.2 GeneID:841645
KEGG:ath:AT1G52150 OMA:EHVASMA Genevestigator:B3H4G8 Uniprot:B3H4G8
Length = 837
Score = 2743 (970.6 bits), Expect = 1.6e-285, P = 1.6e-285
Identities = 553/837 (66%), Positives = 652/837 (77%)
Query: 25 LDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
LDNGKYVRYT EQVEALER+Y +CPKPSS+RRQQLIRECPILSNIEPKQIKVWFQNRRCR
Sbjct: 13 LDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIEPKQIKVWFQNRRCR 72
Query: 85 EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLR--TAPATTDA 142
EKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVSQLV EN Y +Q + PA D
Sbjct: 73 EKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSQLVHENSYFRQHTPNPSLPAK-DT 131
Query: 143 SCDSVVTTPQHSLRDAN-----NPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPD 197
SC+SVVT+ QH L N +PAGLLSIAEETLAEFLSKATGTAV+WVQMPGMKPGPD
Sbjct: 132 SCESVVTSGQHQLASQNPQRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPD 191
Query: 198 SVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNAGTI 257
S+GI AIS C+GVAARACGLV LEPT++AEI+KDRPSWFR+CR++EV + P N GT+
Sbjct: 192 SIGIIAISHGCTGVAARACGLVGLEPTRVAEIVKDRPSWFRECRAVEVMNVLPTANGGTV 251
Query: 258 ELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFVRAEM 317
ELLY Q YAPTTLAP RDFW LRYT+ L++GSLVVCER FVRAEM
Sbjct: 252 ELLYMQLYAPTTLAPPRDFWLLRYTSVLEDGSLVVCERSLKSTQNGPSMPLVQNFVRAEM 311
Query: 318 LPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA------ETS 371
L SG LIRPCDGGGSIIHIVDH++LEA SVPEVLRPLYES KV+AQ+ T+A + +
Sbjct: 312 LSSGYLIRPCDGGGSIIHIVDHMDLEACSVPEVLRPLYESPKVLAQKTTMAALRQLKQIA 371
Query: 372 GEV------VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
EV V G GR+PA LR SQRLSRGFN+AVNGF D+GWS++ D +DV I VNS
Sbjct: 372 QEVTQTNSSVNGWGRRPAALRALSQRLSRGFNEAVNGFTDEGWSVIG-DSMDDVTITVNS 430
Query: 426 TKSLSTASNPT--NSLAFLGGI-LCAKASMLLQNVPPALLVRFLREHRSEWADFNVDAYS 482
+ N T N A + + LCAKASMLLQNVPPA+L+RFLREHRSEWAD N+DAY
Sbjct: 431 SPDKLMGLNLTFANGFAPVSNVVLCAKASMLLQNVPPAILLRFLREHRSEWADNNIDAYL 490
Query: 483 AASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIH 542
AA++K G + R F G Q+I+PL HTIEHEE +EVI+LEG + EDA V RDI
Sbjct: 491 AAAVKVGPCS---ARVGGF-GGQVILPLAHTIEHEEFMEVIKLEGLGHSPEDAIVPRDIF 546
Query: 543 LLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRT 602
LLQ+CSG+DENAVG C+EL+FAPID F DD PLLPSGFRIIPLDS + + +RT
Sbjct: 547 LLQLCSGMDENAVGTCAELIFAPIDASFADDAPLLPSGFRIIPLDSAKQEVS---SPNRT 603
Query: 603 LDLTSSLEVGPATNPAAGD---SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSV 659
LDL S+LE+G A A+ D +S+C RSV+TIAF+F ES++Q++VA+MARQYVR +
Sbjct: 604 LDLASALEIGSAGTKASTDQSGNSTC--ARSVMTIAFEFGIESHMQEHVASMARQYVRGI 661
Query: 660 ISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDS 719
ISSVQRVA+A+ PS +S +G + G+PEA TLA WICQSY ++G ELL+S+S G +S
Sbjct: 662 ISSVQRVALALSPSHISSQVGLRTPLGTPEAQTLARWICQSYRGYMGVELLKSNSDGNES 721
Query: 720 VLKNLWQHSDAILCCSLKSMPVFIFANQAGLDMLETTLVALQDITLDKIFDESGRKALCA 779
+LKNLW H+DAI+CCS+K++PVF FANQAGLDMLETTLVALQDI+L+KIFD++GRK LC+
Sbjct: 722 ILKNLWHHTDAIICCSMKALPVFTFANQAGLDMLETTLVALQDISLEKIFDDNGRKTLCS 781
Query: 780 DFAKLMQQGFTYLPAGICMSTMGRHVSYEQAVAWKVLAPEDNTVHCLAFSFINWSFV 836
+F ++MQQGF L GIC+S+MGR VSYE+AVAWKVL E+N HC+ F FINWSFV
Sbjct: 782 EFPQIMQQGFACLQGGICLSSMGRPVSYERAVAWKVLNEEENA-HCICFVFINWSFV 837
>TAIR|locus:2134088 [details] [associations]
symbol:HB-8 "AT4G32880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0010089 "xylem development"
evidence=RCA;IMP] [GO:0045597 "positive regulation of cell
differentiation" evidence=IMP] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0010014 "meristem initiation"
evidence=RCA;IMP] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA;IMP] [GO:0010067 "procambium
histogenesis" evidence=IEP] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009880 "embryonic pattern specification" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0010431 "seed maturation" evidence=RCA] [GO:0010638 "positive
regulation of organelle organization" evidence=RCA] [GO:0016049
"cell growth" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042546 "cell wall biogenesis"
evidence=RCA] [GO:0044036 "cell wall macromolecule metabolic
process" evidence=RCA] [GO:0045010 "actin nucleation" evidence=RCA]
[GO:0045595 "regulation of cell differentiation" evidence=RCA]
[GO:0048589 "developmental growth" evidence=RCA] [GO:0048765 "root
hair cell differentiation" evidence=RCA] [GO:0051301 "cell
division" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] InterPro:IPR001356 InterPro:IPR004827
InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00338 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
GO:GO:0030154 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0008284 GO:GO:0043565 GO:GO:0045597 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010072
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 GO:GO:0010089 KO:K09338 HSSP:P10037
HOGENOM:HOG000272677 ProtClustDB:CLSN2679470 InterPro:IPR013978
Pfam:PF08670 EMBL:AL161582 EMBL:Z50851 EMBL:AJ441292 EMBL:AY099631
EMBL:BT008798 IPI:IPI00546637 PIR:T10695 RefSeq:NP_195014.1
UniGene:At.31628 ProteinModelPortal:Q39123 SMR:Q39123 IntAct:Q39123
STRING:Q39123 PaxDb:Q39123 PRIDE:Q39123 EnsemblPlants:AT4G32880.1
GeneID:829424 KEGG:ath:AT4G32880 TAIR:At4g32880 eggNOG:NOG325934
InParanoid:Q39123 OMA:DAVMCCS PhylomeDB:Q39123
Genevestigator:Q39123 GO:GO:0010067 Uniprot:Q39123
Length = 833
Score = 2670 (944.9 bits), Expect = 8.6e-278, P = 8.6e-278
Identities = 537/844 (63%), Positives = 650/844 (77%)
Query: 18 GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
GS N H +DNGKYVRYT EQVEALER+Y++CPKPSS+RRQQLIRECPILSNIEPKQIKVW
Sbjct: 4 GSNNSHNMDNGKYVRYTPEQVEALERLYNDCPKPSSMRRQQLIRECPILSNIEPKQIKVW 63
Query: 78 FQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ--QLRT 135
FQNRRCREKQRKEASRLQ VNRKLTAMNKLLMEENDRLQKQVS LV EN Y +Q Q +
Sbjct: 64 FQNRRCREKQRKEASRLQAVNRKLTAMNKLLMEENDRLQKQVSHLVYENSYFRQHPQNQG 123
Query: 136 APATTDASCDSVVT------TPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
ATTD SC+SVVT TPQH RDA+ PAGLLSIA+ETL EF+SKATGTAV+WVQM
Sbjct: 124 NLATTDTSCESVVTSGQHHLTPQHQPRDAS-PAGLLSIADETLTEFISKATGTAVEWVQM 182
Query: 190 PGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMF 249
PGMKPGPDS+GI AIS C+G+AARACGLV L+PT++AEILKD+P W RDCRSL++ +
Sbjct: 183 PGMKPGPDSIGIVAISHGCTGIAARACGLVGLDPTRVAEILKDKPCWLRDCRSLDIVNVL 242
Query: 250 PAGNAGTIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXX 309
N GT+EL+Y Q YAPTTLAPARDFW LRYT+ +++GSLV+CER
Sbjct: 243 STANGGTLELIYMQLYAPTTLAPARDFWMLRYTSVMEDGSLVICERSLNNTQNGPSMPPS 302
Query: 310 XQFVRAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA- 368
FVRAE+LPSG LIRPC+GGGSI+HIVDH +LE WSVPEVLR LYESS ++AQR T+A
Sbjct: 303 PHFVRAEILPSGYLIRPCEGGGSILHIVDHFDLEPWSVPEVLRSLYESSTLLAQRTTMAA 362
Query: 369 -----ETSGEV----VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDV 419
+ S E+ V G GR+PA LR SQRLS+GFN+AVNGF+D+GWS++ DG +DV
Sbjct: 363 LRYLRQISQEISQPNVTGWGRRPAALRALSQRLSKGFNEAVNGFSDEGWSILESDGIDDV 422
Query: 420 IIAVNS--TKSLSTASNP-TNSLAFL-GGILCAKASMLLQNVPPALLVRFLREHRSEWAD 475
+ VNS TK + T+S P N + +LCAKASMLLQNVPP++L+RFLREHR EWAD
Sbjct: 423 TLLVNSSPTKMMMTSSLPFANGYTSMPSAVLCAKASMLLQNVPPSILLRFLREHRQEWAD 482
Query: 476 FNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDA 535
++DAYSAA++KAG + P RP F G Q+I+PL HTIE+EE +EVI+LE QED
Sbjct: 483 NSIDAYSAAAIKAGPCSLPIPRPGSF-GGQVILPLAHTIENEEFMEVIKLESLGHYQEDM 541
Query: 536 FVSRDIHLLQICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPD 595
+ DI LLQ+CSGVDENAV +C+EL+FAPID F DD P++PSGFRIIPLDSK+ +
Sbjct: 542 MMPADIFLLQMCSGVDENAVESCAELIFAPIDASFSDDAPIIPSGFRIIPLDSKS----E 597
Query: 596 TLTAHRTLDLTSSLEVGPATNPAAGDS-SSCHHTRSVLTIAFQFPFESNLQDNVATMARQ 654
L+ +RTLDL S+L+VG T AGDS S +++SV+TIAFQ FE ++Q+NVA+MARQ
Sbjct: 598 GLSPNRTLDLASALDVGSRT---AGDSCGSRGNSKSVMTIAFQLAFEMHMQENVASMARQ 654
Query: 655 YVRSVISSVQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDS 714
YVRSVI+SVQRVA+A+ PS + G + P SPEA TLA WI SY +LG +LL+
Sbjct: 655 YVRSVIASVQRVALALSPSSHQLS-GLRPPPASPEAHTLARWISHSYRCYLGVDLLKPH- 712
Query: 715 VGGDSVLKNLWQHSDAILCCSLKSM-PVFIFANQAGLDMLETTLVALQDITLDKIFDES- 772
G +LK+LW H DA++CCSLK++ PVF FANQAGLDMLETTLVALQDITLDKIFD +
Sbjct: 713 --GTDLLKSLWHHPDAVMCCSLKALSPVFTFANQAGLDMLETTLVALQDITLDKIFDNNN 770
Query: 773 GRKALCADFAKLMQQGFTYLPAGICMSTMGRHVSYEQAVAWKVLAPEDNTVHCLAFSFIN 832
G+K L ++F ++MQQGF + GICMS+MGR V+YE+AV WKVL +D HC+ F F+N
Sbjct: 771 GKKTLSSEFPQIMQQGFMCMDGGICMSSMGRAVTYEKAVGWKVLN-DDEDPHCICFMFLN 829
Query: 833 WSFV 836
WSF+
Sbjct: 830 WSFI 833
>TAIR|locus:2135368 [details] [associations]
symbol:PDF2 "AT4G04890" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0009913 "epidermal cell differentiation"
evidence=IMP] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 EMBL:AL161502 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 HSSP:Q6B2C0
eggNOG:NOG261733 ProtClustDB:CLSN2681990 GO:GO:0048825
GO:GO:0009913 EMBL:AF128393 EMBL:AB056455 EMBL:AF424560
EMBL:AY062575 EMBL:BT000144 IPI:IPI00536198 PIR:E85061
RefSeq:NP_567274.1 UniGene:At.4047 ProteinModelPortal:Q93V99
SMR:Q93V99 IntAct:Q93V99 PaxDb:Q93V99 PRIDE:Q93V99
EnsemblPlants:AT4G04890.1 GeneID:825828 KEGG:ath:AT4G04890
TAIR:At4g04890 InParanoid:Q93V99 OMA:MIPARHM PhylomeDB:Q93V99
Genevestigator:Q93V99 Uniprot:Q93V99
Length = 743
Score = 164 (62.8 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 35/98 (35%), Positives = 55/98 (56%)
Query: 29 KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Y R+T Q++ LE + ECP P +R++L R+ N+EP Q+K WFQN+R + K +
Sbjct: 65 RYHRHTQRQIQELESFFKECPHPDDKQRKELSRDL----NLEPLQVKFWFQNKRTQMKAQ 120
Query: 89 KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
E N+ L + N L EN+R ++ +S C N
Sbjct: 121 SERHE----NQILKSDNDKLRAENNRYKEALSNATCPN 154
Score = 148 (57.2 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 66/288 (22%), Positives = 115/288 (39%)
Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRDCRS----LEVFTMFPAGNA-GTIELLYTQ 263
A+R +V + + EIL D W F S LEV + AGN G ++++ +
Sbjct: 307 ASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAE 366
Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFVRAEMLPSGCL 323
P+ L P R+ + +RY +GS V + +R PSGCL
Sbjct: 367 FQVPSPLVPTRENYFVRYCKQHSDGSWAVVD------VSLDSLRPSTPILRTRRRPSGCL 420
Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA-------ETSGEVVY 376
I+ G S + ++H+ ++ SV + +PL +S + +A + +
Sbjct: 421 IQELPNGYSKVTWIEHMEVDDRSVHNMYKPLVQSGLAFGAKRWVATLERQCERLASSMAS 480
Query: 377 GLGRQPAVLRT---------FSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
+ +V+ + ++R+ F V W+ M+ G++DV V + K
Sbjct: 481 NIPGDLSVITSPEGRKSMLKLAERMVMSFCSGVGASTAHAWTTMSTTGSDDV--RVMTRK 538
Query: 428 SLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
S+ P GI+ + A+ V P + FLR+ R EW
Sbjct: 539 SMDDPGRPP-------GIVLSAATSFWIPVAPKRVFDFLRDENSRKEW 579
Score = 49 (22.3 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 571 PDDGPLLPSGFRIIP 585
PD LLPSGF I+P
Sbjct: 653 PDYVALLPSGFAILP 667
Score = 47 (21.6 bits), Expect = 2.1e-19, Sum P(4) = 2.1e-19
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 622 SSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS-SVQRVAMAI-CPSG 674
S SC S+LT+AFQ +S ++ + V S+I +V+R+ A+ C G
Sbjct: 688 SGSCGG--SLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAVSCDVG 740
Score = 46 (21.3 bits), Expect = 1.6e-07, Sum P(3) = 1.6e-07
Identities = 20/82 (24%), Positives = 37/82 (45%)
Query: 644 LQDNVATMARQYVRSVISSVQRVAMAICPSGLSPTLGPKLSP-GSPEALTLAHWICQSYS 702
+Q +A A+++V ++ +R+A ++ S + L SP G L LA + S+
Sbjct: 452 VQSGLAFGAKRWVATLERQCERLASSMA-SNIPGDLSVITSPEGRKSMLKLAERMVMSFC 510
Query: 703 YHLGAELLRS----DSVGGDSV 720
+GA + + G D V
Sbjct: 511 SGVGASTAHAWTTMSTTGSDDV 532
Score = 39 (18.8 bits), Expect = 7.4e-18, Sum P(3) = 7.4e-18
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 780 DFAKLMQQGFTYLPAG 795
D+ L+ GF LP G
Sbjct: 654 DYVALLPSGFAILPDG 669
>TAIR|locus:2119048 [details] [associations]
symbol:ATML1 "AT4G21750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0009913 "epidermal cell differentiation"
evidence=IGI] [GO:0048825 "cotyledon development" evidence=IGI]
[GO:0006473 "protein acetylation" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010075
"regulation of meristem growth" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=RCA] [GO:0048481 "ovule development" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AL161555 HSSP:Q6B2C0 EMBL:U37589
EMBL:AL035527 EMBL:AY091104 EMBL:AY150491 EMBL:AK229970
IPI:IPI00535360 PIR:T05850 RefSeq:NP_001031692.1 RefSeq:NP_193906.2
UniGene:At.2706 ProteinModelPortal:Q8RWU4 SMR:Q8RWU4 STRING:Q8RWU4
PRIDE:Q8RWU4 EnsemblPlants:AT4G21750.1 EnsemblPlants:AT4G21750.2
GeneID:828263 KEGG:ath:AT4G21750 TAIR:At4g21750 eggNOG:NOG261733
InParanoid:Q8RWU4 OMA:HAWTTLS PhylomeDB:Q8RWU4
ProtClustDB:CLSN2681990 Genevestigator:Q8RWU4 GO:GO:0048825
GO:GO:0009913 Uniprot:Q8RWU4
Length = 762
Score = 161 (61.7 bits), Expect = 6.4e-19, Sum P(4) = 6.4e-19
Identities = 37/98 (37%), Positives = 55/98 (56%)
Query: 29 KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Y R+T Q++ LE + ECP P +R++L RE LS +EP Q+K WFQN+R + K +
Sbjct: 65 RYHRHTQRQIQELESFFKECPHPDDKQRKELSRE---LS-LEPLQVKFWFQNKRTQMKAQ 120
Query: 89 KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
E N+ L + N L EN+R + +S C N
Sbjct: 121 HERHE----NQILKSENDKLRAENNRYKDALSNATCPN 154
Score = 111 (44.1 bits), Expect = 6.4e-19, Sum P(4) = 6.4e-19
Identities = 40/165 (24%), Positives = 69/165 (41%)
Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRD-CR------SLEVFTMFPAGNA-GTIELLYTQ 263
A+R +V + + EIL D W C +LEV + AGN G ++++ +
Sbjct: 316 ASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGVAGNYNGALQVMTAE 375
Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFVRAEMLPSGCL 323
P+ L P R+ + +RY +G V + R+ PSGCL
Sbjct: 376 FQVPSPLVPTRENYFVRYCKQHSDGIWAVVD-------VSLDSLRPSPITRSRRRPSGCL 428
Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIA 368
I+ G S + V+H+ ++ SV + +PL + + +A
Sbjct: 429 IQELQNGYSKVTWVEHIEVDDRSVHNMYKPLVNTGLAFGAKRWVA 473
Score = 68 (29.0 bits), Expect = 6.4e-19, Sum P(4) = 6.4e-19
Identities = 26/97 (26%), Positives = 45/97 (46%)
Query: 379 GRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTNS 438
GR+ ++L+ ++R+ F V W+ ++ G++DV V + KS+ P
Sbjct: 503 GRK-SMLK-LAERMVMSFCTGVGASTAHAWTTLSTTGSDDV--RVMTRKSMDDPGRPP-- 556
Query: 439 LAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
GI+ + A+ V P + FLR+ RSEW
Sbjct: 557 -----GIVLSAATSFWIPVAPKRVFDFLRDENSRSEW 588
Score = 64 (27.6 bits), Expect = 6.4e-19, Sum P(4) = 6.4e-19
Identities = 30/106 (28%), Positives = 45/106 (42%)
Query: 571 PDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGPATN-PAAGDSSSCHHTR 629
PD LLPSGF I+P D + A + G N + SC
Sbjct: 662 PDYVALLPSGFAILP-DGSARGGGGSANASAGAGVEGG---GEGNNLEVVTTTGSCGG-- 715
Query: 630 SVLTIAFQFPFESNLQDNVATMARQYVRSVIS-SVQRVAMAICPSG 674
S+LT+AFQ +S ++ + V S+I +V+R+ A+ G
Sbjct: 716 SLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAALACDG 761
Score = 39 (18.8 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 780 DFAKLMQQGFTYLPAG 795
D+ L+ GF LP G
Sbjct: 663 DYVALLPSGFAILPDG 678
>TAIR|locus:2207235 [details] [associations]
symbol:HDG2 "AT1G05230" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0010090 "trichome morphogenesis" evidence=IMP]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0010090 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 eggNOG:NOG261733 ProtClustDB:CLSN2681990
EMBL:AC000098 EMBL:AY037177 EMBL:AY091690 IPI:IPI00530516
PIR:G86186 RefSeq:NP_001184911.1 RefSeq:NP_172015.1
RefSeq:NP_849596.1 UniGene:At.19179 UniGene:At.50922
ProteinModelPortal:Q94C37 SMR:Q94C37 STRING:Q94C37 PaxDb:Q94C37
PRIDE:Q94C37 EnsemblPlants:AT1G05230.1 EnsemblPlants:AT1G05230.2
EnsemblPlants:AT1G05230.4 GeneID:839256 KEGG:ath:AT1G05230
TAIR:At1g05230 InParanoid:Q94C37 OMA:VGVITNQ PhylomeDB:Q94C37
Genevestigator:Q94C37 Uniprot:Q94C37
Length = 721
Score = 161 (61.7 bits), Expect = 7.6e-16, Sum P(3) = 7.6e-16
Identities = 39/116 (33%), Positives = 59/116 (50%)
Query: 13 RESSSGSINK--HQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
+E SG+ H +Y R+T Q++ +E + ECP P +R+QL RE N+E
Sbjct: 49 QEGGSGNDQDPLHPNKKKRYHRHTQLQIQEMEAFFKECPHPDDKQRKQLSREL----NLE 104
Query: 71 PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
P Q+K WFQN+R + K E N L A N+ L +N R ++ ++ C N
Sbjct: 105 PLQVKFWFQNKRTQMKNHHERHE----NSHLRAENEKLRNDNLRYREALANASCPN 156
Score = 121 (47.7 bits), Expect = 7.6e-16, Sum P(3) = 7.6e-16
Identities = 71/290 (24%), Positives = 121/290 (41%)
Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRDCRS----LEVFTMFPAGNA-GTIELLYTQ 263
A+R +V + I EIL D W F S L V + AGN G ++++ +
Sbjct: 300 ASRESAVVIMNHVNIVEILMDVNQWSTIFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAE 359
Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFVRAEMLPSGCL 323
P+ L P R+ + RY +GS V + R SGCL
Sbjct: 360 FQVPSPLVPTRETYFARYCKQQGDGSWAVVD-------ISLDSLQPNPPARCRRRASGCL 412
Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPL------YESSKVVA------QRM-TIAET 370
I+ G S + V+H+ ++ V + + + + + + VA +R+ ++ T
Sbjct: 413 IQELPNGYSKVTWVEHVEVDDRGVHNLYKHMVSTGHAFGAKRWVAILDRQCERLASVMAT 472
Query: 371 ---SGEV--VYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNS 425
SGEV + + ++L+ ++R+ F V+ W+ ++ GAEDV V +
Sbjct: 473 NISSGEVGVITNQEGRRSMLK-LAERMVISFCAGVSASTAHTWTTLSGTGAEDV--RVMT 529
Query: 426 TKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREH--RSEW 473
KS+ P GI+ + A+ VPP + FLR+ R+EW
Sbjct: 530 RKSVDDPGRPP-------GIVLSAATSFWIPVPPKRVFDFLRDENSRNEW 572
Score = 49 (22.3 bits), Expect = 7.6e-16, Sum P(3) = 7.6e-16
Identities = 10/15 (66%), Positives = 11/15 (73%)
Query: 571 PDDGPLLPSGFRIIP 585
PD LLPSGF I+P
Sbjct: 646 PDYVALLPSGFAILP 660
Score = 39 (18.8 bits), Expect = 7.9e-15, Sum P(3) = 7.9e-15
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 780 DFAKLMQQGFTYLPAG 795
D+ L+ GF LP G
Sbjct: 647 DYVALLPSGFAILPDG 662
Score = 37 (18.1 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 128 YMKQQLRTAPATTDASCDSVVTTP 151
Y KQQ + A D S DS+ P
Sbjct: 377 YCKQQGDGSWAVVDISLDSLQPNP 400
>TAIR|locus:2097770 [details] [associations]
symbol:HDG8 "AT3G03260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338 EMBL:AC012328
EMBL:AK117867 IPI:IPI00538783 RefSeq:NP_186976.2 UniGene:At.41007
ProteinModelPortal:Q9M9P4 SMR:Q9M9P4 PRIDE:Q9M9P4
EnsemblPlants:AT3G03260.1 GeneID:821305 KEGG:ath:AT3G03260
TAIR:At3g03260 InParanoid:Q9M9P4 OMA:LNMESVA PhylomeDB:Q9M9P4
Genevestigator:Q9M9P4 Uniprot:Q9M9P4
Length = 699
Score = 157 (60.3 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 35/100 (35%), Positives = 54/100 (54%)
Query: 27 NGKYV--RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCR 84
NGK R+T +Q++ LE + ECP P +R QL RE +EP QIK WFQN+R +
Sbjct: 22 NGKRTCHRHTPQQIQRLEAYFKECPHPDERQRNQLCREL----KLEPDQIKFWFQNKRTQ 77
Query: 85 EKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
K +++ S N L N+ L +N+ + + ++C
Sbjct: 78 SKTQEDRS----TNVLLRGENETLQSDNEAMLDALKSVLC 113
Score = 94 (38.1 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 82/411 (19%), Positives = 161/411 (39%)
Query: 205 SQSCSGVAARACGLVS--LEPTKIAEILKDRPSWFRDCRSLEVF-TMFPA-GNAGTIELL 260
S++ + V A L+ L+P K E+ P+ ++ V + P GN ++++
Sbjct: 269 SKAVTVVHVEAINLIQMFLDPEKWKELF---PTIVNKANTIHVLGSGLPIRGNCNVLQVM 325
Query: 261 YTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFVRAEMLPS 320
+ Q + + L PAR+F +R ++ G ++ + + R PS
Sbjct: 326 WEQLHILSPLVPAREFMVVRCCQEIEKGIWIIAD---VSHRANFDFGNAACYKR----PS 378
Query: 321 GCLIRPCDGGGSIIHIVDHLNLE-AWSVPEVLRPL------YESSK--VVAQRMT--IAE 369
GCLI+ S + ++H+ ++ ++ R L Y + + V +RM +A
Sbjct: 379 GCLIQALPDAHSKVMWIEHVEVDHKLDTHKIYRDLLSGGSGYGAKRWIVTLERMCERMAL 438
Query: 370 TSGEVVYGLGRQPAVLRTFSQRLSRGFNDA-VNGFNDDGWSLMTCDGAEDVIIAVNSTKS 428
+S + + R + ++R + V FN+ ++T G D S
Sbjct: 439 SSIQTLPPSDRSEVITTGEARRSVMKLGERMVKNFNE----MLTMSGKID--FPQQSKNG 492
Query: 429 LSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR--EHRSEW--ADFNVDAYSAA 484
+ + GI+ + +S L + P + FL+ + R +W + A
Sbjct: 493 VRVSIRMNIEAGQPPGIVVSASSSLAIPLTPLQVFAFLQNLDTRQQWDILSYGTVVNEIA 552
Query: 485 SLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEHEELLEVIRLEGHSLAQEDAFVSRDIHLL 544
+ GS T I+ + T HEE + + ++ ++D + +D ++
Sbjct: 553 RIVTGSSE---------TNCVTILRVHPT--HEENNDKMVVQDS--CKDDMLMLQDCYM- 598
Query: 545 QICSGVDENAVGACSELVFAPIDEMFPDDGPLLPSGFRIIPLDSKTPDTPD 595
G+ A + + FA E+ P P+LPSGF +I D + D
Sbjct: 599 DALGGMIVYAPMDMATMHFAVSGEVDPSHIPILPSGF-VISSDGRRSTVED 648
>TAIR|locus:2206880 [details] [associations]
symbol:HDG11 "AT1G73360" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS;IDA] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0010091 "trichome branching"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836 KO:K09338
EMBL:AC012396 EMBL:BT003979 EMBL:BT004915 IPI:IPI00520147
PIR:B96760 RefSeq:NP_177479.1 UniGene:At.34997
ProteinModelPortal:Q9FX31 SMR:Q9FX31 IntAct:Q9FX31 PaxDb:Q9FX31
PRIDE:Q9FX31 EnsemblPlants:AT1G73360.1 GeneID:843671
KEGG:ath:AT1G73360 TAIR:At1g73360 eggNOG:NOG70408 InParanoid:Q9FX31
OMA:MKLAQRM PhylomeDB:Q9FX31 ProtClustDB:CLSN2679864
Genevestigator:Q9FX31 Uniprot:Q9FX31
Length = 722
Score = 160 (61.4 bits), Expect = 1.0e-11, Sum P(4) = 1.0e-11
Identities = 36/98 (36%), Positives = 54/98 (55%)
Query: 29 KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Y R+TA+Q++ LE + ECP P +R QL RE + P+QIK WFQNRR + K +
Sbjct: 35 RYHRHTAQQIQRLESSFKECPHPDEKQRNQLSREL----GLAPRQIKFWFQNRRTQLKAQ 90
Query: 89 KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCEN 126
E + N L A N + EN +++ + +C N
Sbjct: 91 HERAD----NSALKAENDKIRCENIAIREALKHAICPN 124
Score = 96 (38.9 bits), Expect = 1.0e-11, Sum P(4) = 1.0e-11
Identities = 39/152 (25%), Positives = 61/152 (40%)
Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL----EVFTMFPAGNAGTIE----LLYTQ 263
A+R+ G+V + + ++ D W S+ + + +G GT E LLY +
Sbjct: 291 ASRSSGIVFMNAMALVDMFMDCVKWTELFPSIIAASKTLAVISSGMGGTHEGALHLLYEE 350
Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFVRAEMLPSGCL 323
+ L R+F LRY + GS +V Q R PSGCL
Sbjct: 351 MEVLSPLVATREFCELRYCQQTEQGSWIVVN----VSYDLPQFVSHSQSYR---FPSGCL 403
Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLY 355
I+ G S + V+H+ E E++ LY
Sbjct: 404 IQDMPNGYSKVTWVEHIETEE---KELVHELY 432
Score = 38 (18.4 bits), Expect = 1.0e-11, Sum P(4) = 1.0e-11
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 575 PLLPSGFRIIP 585
PLL SGF I P
Sbjct: 638 PLLSSGFTISP 648
Score = 37 (18.1 bits), Expect = 1.0e-11, Sum P(4) = 1.0e-11
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 422 AVNSTKSLSTASNPTNSLAFLGG 444
AV +S S+P N ++ L G
Sbjct: 569 AVQEVAHISNGSHPGNCISVLRG 591
>TAIR|locus:2127008 [details] [associations]
symbol:ANL2 "ANTHOCYANINLESS 2" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043481 "anthocyanin accumulation in tissues in
response to UV light" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] [GO:0048765 "root hair cell differentiation"
evidence=IMP] [GO:0006473 "protein acetylation" evidence=RCA]
[GO:0042335 "cuticle development" evidence=IMP] InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0043481 GO:GO:0042335 Gene3D:1.10.10.60
SUPFAM:SSF46689 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
EMBL:AF058919 EMBL:AL161472 EMBL:U85254 EMBL:AF077335 EMBL:AK226968
IPI:IPI00538459 PIR:T01237 RefSeq:NP_567183.2 UniGene:At.24442
ProteinModelPortal:Q0WV12 SMR:Q0WV12 STRING:Q0WV12 PaxDb:Q0WV12
PRIDE:Q0WV12 EnsemblPlants:AT4G00730.1 GeneID:828022
KEGG:ath:AT4G00730 TAIR:At4g00730 eggNOG:euNOG18333
HOGENOM:HOG000243256 InParanoid:Q0WV12 OMA:MAGTING PhylomeDB:Q0WV12
ProtClustDB:CLSN2685237 Genevestigator:Q0WV12 GO:GO:0048765
Uniprot:Q0WV12
Length = 802
Score = 139 (54.0 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 32/86 (37%), Positives = 50/86 (58%)
Query: 29 KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRE-CPILSNIEPKQIKVWFQNRRCREK- 86
+Y R+T +Q++ LE ++ ECP P +R +L + C +E +Q+K WFQNRR + K
Sbjct: 137 RYHRHTPQQIQELESMFKECPHPDEKQRLELSKRLC-----LETRQVKFWFQNRRTQMKT 191
Query: 87 --QRKEASRLQTVNRKLTAMNKLLME 110
+R E + L+ N KL A N + E
Sbjct: 192 QLERHENALLRQENDKLRAENMSIRE 217
Score = 105 (42.0 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 68/288 (23%), Positives = 110/288 (38%)
Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR--DCRSLEVFT--MFPAGNAGTI----ELLYTQ 263
A+R G+V + + E L D W C T + G AGTI +L+ +
Sbjct: 376 ASRTSGMVIINSLALVETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMNAE 435
Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFVRAEMLPSGCL 323
+ L P R+ LR+ G V + +R LPSGC+
Sbjct: 436 LQVLSPLVPVRNVNFLRFCKQHAEGVWAVVD---VSIDPVRENSGGAPVIRR--LPSGCV 490
Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPL------YESSKVVA--QR----MTIAETS 371
++ G S + V+H + + ++ RPL + S + +A QR + I +S
Sbjct: 491 VQDVSNGYSKVTWVEHAEYDENQIHQLYRPLLRSGLGFGSQRWLATLQRQCECLAILISS 550
Query: 372 GEVVY-GLGRQPAVLRTF---SQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVIIAVNSTK 427
+ P ++ +QR++ F ++ + WS +T G D + V + K
Sbjct: 551 SVTSHDNTSITPGGRKSMLKLAQRMTFNFCSGISAPSVHNWSKLTV-GNVDPDVRVMTRK 609
Query: 428 SLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLREHRS--EW 473
S+ P G +L A S+ L P L FLR R EW
Sbjct: 610 SVDDPGEPP------GIVLSAATSVWLPAAPQRLY-DFLRNERMRCEW 650
Score = 47 (21.6 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 526 EGHSLAQEDAFVSRDIHLLQICSGVDENAVGACSELV-FAPID----EMFPDDGP----- 575
+G SL + +A + +L + E + A LV +AP+D + + G
Sbjct: 671 QGVSLLRSNAMNANQSSMLIL----QETCIDASGALVVYAPVDIPAMHVVMNGGDSSYVA 726
Query: 576 LLPSGFRIIP 585
LLPSGF ++P
Sbjct: 727 LLPSGFAVLP 736
>TAIR|locus:2129396 [details] [associations]
symbol:HDG4 "AT4G17710" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006944 "cellular membrane fusion" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256 KO:K09338
HSSP:Q6B2C0 EMBL:Z97344 eggNOG:NOG264325 EMBL:AY133700
IPI:IPI00546205 PIR:B71447 RefSeq:NP_193506.2 UniGene:At.32974
ProteinModelPortal:Q8L7H4 SMR:Q8L7H4 IntAct:Q8L7H4 PaxDb:Q8L7H4
PRIDE:Q8L7H4 EnsemblPlants:AT4G17710.1 GeneID:827492
KEGG:ath:AT4G17710 TAIR:At4g17710 InParanoid:Q8L7H4
PhylomeDB:Q8L7H4 Genevestigator:Q8L7H4 Uniprot:Q8L7H4
Length = 709
Score = 134 (52.2 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 49/173 (28%), Positives = 82/173 (47%)
Query: 29 KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Y R+TA Q++ +E ++ E P + R +L ++ + P Q+K WFQN+R + K +
Sbjct: 91 RYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKL----GLSPIQVKFWFQNKRTQIKAQ 146
Query: 89 KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENGYMKQQL---RTA 136
+ S N KL A N+ L E+ +Q L C EN ++Q+L R+
Sbjct: 147 QSRSD----NAKLKAENETLKTESQNIQSNFQCLFCSTCGHNLRLENARLRQELDRLRSI 202
Query: 137 PATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQM 189
+ + S +T P+ + NN +L IAEE A + A A + +M
Sbjct: 203 VSMRNPSPSQEIT-PE---TNKNNNDNML-IAEEEKAIDMELAVSCARELAKM 250
Score = 103 (41.3 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 36/155 (23%), Positives = 66/155 (42%)
Query: 212 AARACGLVSLEPTKIAEILKDRPSWFR-------DCRSLEVFTMFPAGNAGTIELLYTQA 264
A+RA ++ L + + D W ++ ++ + +G +GT+ L++ +
Sbjct: 294 ASRANAVIMLNCITLVKAFLDADKWSEMFFPIVSSAKTAQIISSGASGPSGTLLLMFAEL 353
Query: 265 YAPTTLAPARDFWTLRYTT-TLDNGSLVVCERXXXXXXXXXXXXXXXQFVRAEMLPSGCL 323
+ L P R+ + LRY + G +V + Q+ R PSGC+
Sbjct: 354 QVVSPLVPTREAYFLRYVEQNAEEGKWMVVD-FPIDRIKPASATTTDQYRRK---PSGCI 409
Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVP-EVLRPLYES 357
I+ G S + V+H+ +E V EV+R ES
Sbjct: 410 IQAMRNGYSQVTWVEHVEVEEKHVQDEVVREFVES 444
Score = 52 (23.4 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 571 PDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEV 611
P + PLLP GF ++P++ ++++ L LT +++V
Sbjct: 631 PSEIPLLPVGFSVVPVNPSDGVEGSSVSSPSCL-LTVAIQV 670
>TAIR|locus:2062540 [details] [associations]
symbol:HDG3 "AT2G32370" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048825 "cotyledon development" evidence=IGI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 KO:K09338 eggNOG:NOG261733 GO:GO:0048825
EMBL:AC005700 EMBL:EF988635 IPI:IPI00527257 PIR:C84732
RefSeq:NP_180796.2 UniGene:At.38083 ProteinModelPortal:Q9ZV65
SMR:Q9ZV65 PaxDb:Q9ZV65 PRIDE:Q9ZV65 EnsemblPlants:AT2G32370.1
GeneID:817798 KEGG:ath:AT2G32370 TAIR:At2g32370 InParanoid:A7LBA8
PhylomeDB:Q9ZV65 Genevestigator:Q9ZV65 Uniprot:Q9ZV65
Length = 725
Score = 154 (59.3 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 34/96 (35%), Positives = 53/96 (55%)
Query: 29 KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
KY R+T Q+ +E + ECP P +R L + ++P QIK WFQN+R + K +
Sbjct: 71 KYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQL----GLDPVQIKFWFQNKRTQNKNQ 126
Query: 89 KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
+E R + N +L +N L EN RL++ + Q +C
Sbjct: 127 QE--RFE--NSELRNLNNHLRSENQRLREAIHQALC 158
Score = 88 (36.0 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 69/293 (23%), Positives = 107/293 (36%)
Query: 212 AARACGLVSLEPTKIAEILKDRPSW---FRD----CRSLEVFTMFPAGNA-GTIELLYTQ 263
A+R LV++ PT I E+L W F R+ E AGN G ++++ +
Sbjct: 307 ASRETALVAMCPTGIVEMLMQENLWSTMFAGIVGRARTHEQIMADAAGNFNGNLQIMSAE 366
Query: 264 AYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFVRAEMLPSGCL 323
+ L R+ + +RY G V + ++ PSGCL
Sbjct: 367 YQVLSPLVTTRESYFVRYCKQQGEGLWAVVDISIDHLLPNIN-------LKCRRRPSGCL 419
Query: 324 IRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAETSGEVVYGLGRQPA 383
I+ G S + V+H+ ++ + L + + A + G +V R +
Sbjct: 420 IQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWV----GTLVRQCERISS 475
Query: 384 VLRTFSQRLSRGFNDAVNGFNDDGWSL--------------MT-------CDGAEDVIIA 422
+L T Q + G D + N S+ MT G E I
Sbjct: 476 ILSTDFQSVDSG--DHITLTNHGKMSMLKIAERIARTFFAGMTNATGSTIFSGVEGEDIR 533
Query: 423 VNSTKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLRE--HRSEW 473
V + KS++ P G I+CA S L PP + FLRE HR W
Sbjct: 534 VMTMKSVNDPGKPP------GVIICAATSFWLP-APPNTVFDFLREATHRHNW 579
Score = 45 (20.9 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 571 PDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEVGP 613
PD +LPSGF I P + P + + T+ +E GP
Sbjct: 652 PDFVVILPSGFAIFPDGTGKPGGKEGGSL-LTISFQMLVESGP 693
Score = 42 (19.8 bits), Expect = 5.2e-11, Sum P(3) = 5.2e-11
Identities = 21/83 (25%), Positives = 35/83 (42%)
Query: 585 PLDSKTPDTPDTLTAHRTLDLTSSLEVGPATNPAAGDSSSCHHTRSVLTIAFQFPFESNL 644
P+D + D TL D L G A P S+LTI+FQ ES
Sbjct: 636 PVDMTSMDI--TLHGGGDPDFVVILPSGFAIFPDGTGKPGGKEGGSLLTISFQMLVESGP 693
Query: 645 QDNVATMARQYVRSVI-SSVQRV 666
+ ++ + ++I ++V+R+
Sbjct: 694 EARLSVSSVATTENLIRTTVRRI 716
>TAIR|locus:2145116 [details] [associations]
symbol:HDG7 "AT5G52170" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 eggNOG:euNOG18333
HOGENOM:HOG000243256 HSSP:Q6B2C0 EMBL:AB025603 IPI:IPI00525258
RefSeq:NP_200030.1 UniGene:At.55500 ProteinModelPortal:Q9LTK3
SMR:Q9LTK3 EnsemblPlants:AT5G52170.1 GeneID:835293
KEGG:ath:AT5G52170 TAIR:At5g52170 InParanoid:Q9LTK3
PhylomeDB:Q9LTK3 Genevestigator:Q9LTK3 Uniprot:Q9LTK3
Length = 682
Score = 141 (54.7 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 34/85 (40%), Positives = 48/85 (56%)
Query: 29 KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
KY R+T+ Q++ LE + ECP P+ +R +L ++ +E KQIK WFQNRR + K
Sbjct: 60 KYHRHTSYQIQELESFFKECPHPNEKQRLELGKKL----TLESKQIKFWFQNRRTQMKTQ 115
Query: 87 -QRKEASRLQTVNRKLTAMNKLLME 110
+R E L+ N KL N L E
Sbjct: 116 LERHENVILKQENEKLRLENSFLKE 140
Score = 92 (37.4 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 37/154 (24%), Positives = 61/154 (39%)
Query: 213 ARACGLVSLEPTKIAEILKDRPSWFR--DC-----RSLEVFTMFPAGNA-GTIELLYTQA 264
+R GLV + + E L D W +C +LEV + G+ G+I L+ +
Sbjct: 258 SRETGLVLINSLALVETLMDTNKWAEMFECIVAVASTLEVISNGSDGSRNGSILLMQAEF 317
Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFVRAEMLPSGCLI 324
+ L P + LRY +G V + + ++M PSGC+I
Sbjct: 318 QVMSPLVPIKQKKFLRYCKQHGDGLWAVVD---VSYDINRGNENLKSYGGSKMFPSGCII 374
Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESS 358
+ G S + ++H E + +PL SS
Sbjct: 375 QDIGNGCSKVTWIEHSEYEESHTHSLYQPLLSSS 408
Score = 46 (21.3 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 12/22 (54%), Positives = 14/22 (63%)
Query: 576 LLPSGFRIIPL-DSKTPDTPDT 596
LLPSGF I+P S + D DT
Sbjct: 604 LLPSGFSILPDGSSSSSDQFDT 625
>TAIR|locus:2030913 [details] [associations]
symbol:HDG12 "homeodomain GLABROUS 12" species:3702
"Arabidopsis thaliana" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010091 "trichome
branching" evidence=IGI] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0031507
"heterochromatin assembly" evidence=RCA] [GO:0045787 "positive
regulation of cell cycle" evidence=RCA] [GO:0048451 "petal
formation" evidence=RCA] [GO:0048453 "sepal formation"
evidence=RCA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 INTERPRO:IPR002913 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 EMBL:AC034106 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 GO:GO:0010091 HSSP:P02836
KO:K09338 eggNOG:NOG70408 ProtClustDB:CLSN2679864 EMBL:AF424554
EMBL:BT001050 IPI:IPI00531481 PIR:D86314 RefSeq:NP_564041.2
UniGene:At.15827 ProteinModelPortal:Q9LMT8 SMR:Q9LMT8 PaxDb:Q9LMT8
PRIDE:Q9LMT8 EnsemblPlants:AT1G17920.1 GeneID:838371
KEGG:ath:AT1G17920 TAIR:At1g17920 InParanoid:Q9LMT8 OMA:CENIAMQ
PhylomeDB:Q9LMT8 Genevestigator:Q9LMT8 Uniprot:Q9LMT8
Length = 687
Score = 142 (55.0 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 50/186 (26%), Positives = 83/186 (44%)
Query: 17 SGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKV 76
S K ++ R+T Q++ LE ++EC P +R QL RE + P+QIK
Sbjct: 12 SSETEKKNKKKKRFHRHTPHQIQRLESTFNECQHPDEKQRNQLSREL----GLAPRQIKF 67
Query: 77 WFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC---------ENG 127
WFQNRR ++K + E + N L N + EN +++ + +C E+
Sbjct: 68 WFQNRRTQKKAQHERAD----NCALKEENDKIRCENIAIREAIKHAICPSCGDSPVNEDS 123
Query: 128 YM-KQQLRTAPATTDASCDSVVTTPQHSL-RDANNPAGLLSIAEETLAEFLSKATGTAVD 185
Y +Q+LR A + V + L R ++ LL+ + E TG ++D
Sbjct: 124 YFDEQKLRIENAQLRDELERVSSIAAKFLGRPISHLPPLLNPMHVSPLELFH--TGPSLD 181
Query: 186 WVQMPG 191
+ +PG
Sbjct: 182 FDLLPG 187
Score = 90 (36.7 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 59/258 (22%), Positives = 104/258 (40%)
Query: 197 DSVGIFAISQSCSGVAARACGLVSL--EPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNA 254
+++G+ A S+S V A LV + K+ E+ PS ++L V + GN
Sbjct: 265 NNLGMEA-SRSSGVVFTNAITLVDMLMNSVKLTELF---PSIVASSKTLAVISSGLRGNH 320
Query: 255 G-TIELLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFV 313
G + L+ + + L R+F LRY +++G+ + QF+
Sbjct: 321 GDALHLMIEELQVLSPLVTTREFCVLRYCQQIEHGTWAIVN----------VSYEFPQFI 370
Query: 314 ---RAEMLPSGCLIRPCDGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKVVAQRMTIAET 370
R+ PSGCLI+ G S + V+H E P++E K + +
Sbjct: 371 SQSRSYRFPSGCLIQDMSNGYSKVTWVEHGEFEEQE------PIHEMFKDIVHK------ 418
Query: 371 SGEVVYGLGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSLMTCDGAEDVI-----IAVNS 425
G + +G R A L+ +R + A + D G + + +G ++ + N
Sbjct: 419 -G-LAFGAERWIATLQRMCERFTNLLEPATSSL-DLGGVIPSPEGKRSIMRLAHRMVSNF 475
Query: 426 TKSLSTASNPTNSLAFLG 443
S+ T++N T S G
Sbjct: 476 CLSVGTSNN-TRSTVVSG 492
Score = 44 (20.5 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 575 PLLPSGFRIIP 585
P+LPSGF I P
Sbjct: 621 PILPSGFAISP 631
>TAIR|locus:2098866 [details] [associations]
symbol:HDG1 "AT3G61150" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL137898 Pfam:PF01852
SMART:SM00234 PROSITE:PS50848 HOGENOM:HOG000243256
ProtClustDB:CLSN2685237 KO:K09338 EMBL:AJ224338 EMBL:AY050866
EMBL:AY096757 IPI:IPI00541112 PIR:T47907 RefSeq:NP_191674.1
UniGene:At.21209 HSSP:Q8C172 ProteinModelPortal:Q9M2E8 SMR:Q9M2E8
IntAct:Q9M2E8 PaxDb:Q9M2E8 PRIDE:Q9M2E8 EnsemblPlants:AT3G61150.1
GeneID:825287 KEGG:ath:AT3G61150 TAIR:At3g61150 eggNOG:NOG267226
InParanoid:Q9M2E8 OMA:HTEYDEN PhylomeDB:Q9M2E8
Genevestigator:Q9M2E8 Uniprot:Q9M2E8
Length = 808
Score = 144 (55.7 bits), Expect = 6.3e-10, Sum P(5) = 6.3e-10
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 29 KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREK-- 86
+Y R+T +Q++ LE V+ EC P +R L R N++P+Q+K WFQNRR + K
Sbjct: 113 RYHRHTPKQIQDLESVFKECAHPDEKQRLDLSRRL----NLDPRQVKFWFQNRRTQMKTQ 168
Query: 87 -QRKEASRLQTVNRKLTAMNKLLME 110
+R E + L+ N KL A N + E
Sbjct: 169 IERHENALLRQENDKLRAENMSVRE 193
Score = 80 (33.2 bits), Expect = 6.3e-10, Sum P(5) = 6.3e-10
Identities = 31/150 (20%), Positives = 53/150 (35%)
Query: 212 AARACGLVSLEPTKIAEILKDRPSWFRDCRSL-------EVFTMFPAGNAGTIELLYTQA 264
A++ G V + + E L D W S+ E+ + G G + L++ +
Sbjct: 374 ASKEAGTVIINSLALVETLMDSERWAEMFPSMVSRTSTTEIISSGMGGRNGALHLMHAEL 433
Query: 265 YAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFVRAEMLPSGCLI 324
+ L P R LR+ G V + LPSGCL+
Sbjct: 434 QLLSPLVPVRQVSFLRFCKQHAEGVWAVVDVSIDSIREGSSSS-------CRRLPSGCLV 486
Query: 325 RPCDGGGSIIHIVDHLNLEAWSVPEVLRPL 354
+ G S + ++H + + + RPL
Sbjct: 487 QDMANGYSKVTWIEHTEYDENHIHRLYRPL 516
Score = 48 (22.0 bits), Expect = 6.3e-10, Sum P(5) = 6.3e-10
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 620 GDSSSCHHTRSVLTIAFQFPFESNLQDNVATMARQYVRSVIS-SVQRVAMAI-CPS 673
G+ S+LT+AFQ S + + + V ++IS +VQ++ A+ C S
Sbjct: 752 GNGGCMEEGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCDS 807
Score = 46 (21.3 bits), Expect = 6.3e-10, Sum P(5) = 6.3e-10
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 529 SLAQEDAFVSRDIHLLQICSGVDENAVGACSELVFAPID----EMFPDDGP-----LLPS 579
SL + A + +L I +A GA +V+AP+D + + G LLPS
Sbjct: 672 SLLRASAINANQSSML-ILQETSIDAAGAV--VVYAPVDIPAMQAVMNGGDSAYVALLPS 728
Query: 580 GFRIIP 585
GF I+P
Sbjct: 729 GFAILP 734
Score = 37 (18.1 bits), Expect = 6.3e-10, Sum P(5) = 6.3e-10
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 403 FNDDGWSLMTCDGAEDVIIAVNSTKSLSTASNPTN 437
F W E + I ++ST S ST +P N
Sbjct: 523 FGAHRWMAALQRQCECLTILMSSTVSTSTNPSPIN 557
>TAIR|locus:2167230 [details] [associations]
symbol:HDG9 "AT5G17320" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;IDA] InterPro:IPR001356 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
INTERPRO:IPR002913 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:3.30.530.20
InterPro:IPR023393 Pfam:PF01852 SMART:SM00234 PROSITE:PS50848
HOGENOM:HOG000243256 EMBL:AB005238 ProtClustDB:CLSN2679643
IPI:IPI00529269 RefSeq:NP_197234.1 UniGene:At.54882
ProteinModelPortal:Q9FFI0 SMR:Q9FFI0 EnsemblPlants:AT5G17320.1
GeneID:831598 KEGG:ath:AT5G17320 TAIR:At5g17320 eggNOG:KOG0493
InParanoid:Q9FFI0 PhylomeDB:Q9FFI0 Genevestigator:Q9FFI0
Uniprot:Q9FFI0
Length = 718
Score = 164 (62.8 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 21 NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
N+H+ G Y R+T EQ+ LE + ECP P +R+ L E N++PKQIK WFQN
Sbjct: 23 NRHE-KKG-YHRHTNEQIHRLETYFKECPHPDEFQRRLLGEEL----NLKPKQIKFWFQN 76
Query: 81 RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
+R + K E + N L A N + EN+ ++ ++ +VC
Sbjct: 77 KRTQAKSHNEKAD----NAALRAENIKIRRENESMEDALNNVVC 116
Score = 55 (24.4 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 48/230 (20%), Positives = 89/230 (38%)
Query: 259 LLYTQAYAPTTLAPARDFWTLRYTTTLDNGSLVVCERXXXXXXXXXXXXXXXQFVRAEML 318
++Y Q + + L P R+F LR +++ ++ + F
Sbjct: 346 VIYEQLHILSPLVPPREFMILRTCQQIEDNVWMIAD----VSCHLPNIEFDLSFPICTKR 401
Query: 319 PSGCLIRPCDGGGSIIHIVDHLNLEAWSV-PEVL-RPL-YESSKVVAQRMTIA--ETSGE 373
PSG LI+ G S + ++H+ + V P L R L Y A+R T+ T
Sbjct: 402 PSGVLIQALPHGFSKVTWIEHVVVNDNRVRPHKLYRDLLYGGFGYGARRWTVTLERTCER 461
Query: 374 VVYGLGRQPAVLRTFSQ---RLSRGFNDAVN-G---FNDDGWSLMTCDGAEDVIIAVNST 426
+++ PA+ + + RG N ++ G + W + + + + +
Sbjct: 462 LIFSTS-VPALPNNDNPGVVQTIRGRNSVMHLGERMLRNFAWMMKMVNKLDFSPQSETNN 520
Query: 427 KSLSTASNPTNSLAFLGG-ILCAKASMLLQNVPPALLVRFLR--EHRSEW 473
+ N G I+CA +S+ L +PP + FL+ E R +W
Sbjct: 521 SGIRIGVRINNEAGQPPGLIVCAGSSLSLP-LPPVQVYDFLKNLEVRHQW 569
Score = 50 (22.7 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 539 RDIHL-LQICSGVDENAVGACSELVFAPID----------EMFPDDGPLLPSGFRIIPLD 587
RDI+ L I ++A+G + +AP+D ++ P P+LPSGF +I D
Sbjct: 602 RDINTKLMILQDSFKDALGGM--VAYAPMDLNTACAAISGDIDPTTIPILPSGF-MISRD 658
Query: 588 SKTPDTPDTLTAHRTLDLTSSLEV---GPATNP 617
+ P + TL LT + ++ GP+ +P
Sbjct: 659 GR-PSEGEAEGGSYTL-LTVAFQILVSGPSYSP 689
Score = 40 (19.1 bits), Expect = 4.5e-08, Sum P(3) = 4.5e-08
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 431 TASNPTNSLAFL 442
T SNP N+++FL
Sbjct: 586 TGSNPRNTVSFL 597
>TAIR|locus:2023932 [details] [associations]
symbol:HDG10 "AT1G34650" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057 Pfam:PF00046
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 INTERPRO:IPR002913
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:3.30.530.20 InterPro:IPR023393 Pfam:PF01852 SMART:SM00234
PROSITE:PS50848 HOGENOM:HOG000243256 EMBL:AC007894 EMBL:AC023279
IPI:IPI00526139 PIR:B86470 RefSeq:NP_174724.1 UniGene:At.51941
ProteinModelPortal:Q9S9Z0 SMR:Q9S9Z0 EnsemblPlants:AT1G34650.1
GeneID:840369 KEGG:ath:AT1G34650 TAIR:At1g34650 InParanoid:Q9S9Z0
PhylomeDB:Q9S9Z0 ProtClustDB:CLSN2679643 Genevestigator:Q9S9Z0
Uniprot:Q9S9Z0
Length = 708
Score = 129 (50.5 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 32/109 (29%), Positives = 55/109 (50%)
Query: 16 SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
+ S ++ +D+ ++ QV+ LE + ECP P +R+QL E N++ KQIK
Sbjct: 6 NDSSSDEEGIDSNNRRHHSNHQVQRLEAFFHECPHPDDSQRRQLGNEL----NLKHKQIK 61
Query: 76 VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
WFQNRR + + E + N L N + N+ ++K + ++C
Sbjct: 62 FWFQNRRTQARIHNEKAD----NIALRVENMKIRCVNEAMEKALETVLC 106
Score = 56 (24.8 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 44/171 (25%), Positives = 73/171 (42%)
Query: 319 PSGCLIRPCDGGGSIIHIVDHLNL--EAWSVPEVLRPL-YESSKVVAQRMTIA-ETSGE- 373
PSG LI+ G S + ++H+ + + W ++ R L Y A+R T + E
Sbjct: 395 PSGVLIQALPHGRSKVTWIEHVEVTDKVWP-HQLYRDLLYGGFGYGARRWTATLQRMCER 453
Query: 374 -VVYGLGR-----QPAVLRTFSQRLS-RGFNDAVNGFNDDGWSLMTCDGAE--DVIIAVN 424
+Y + P V++T R S + + + W + D + A N
Sbjct: 454 LSLYSMTDFPPTDYPGVVKTIEGRRSVMSLGERM--LKNFAWIMKMSDKLDLPQQSGANN 511
Query: 425 STKSLSTASNPTNSLAFLGGILCAKASMLLQNVPPALLVRFLR--EHRSEW 473
S +S +N T + G I+CA +S+ L +PP + FLR E R +W
Sbjct: 512 SGVRISVRTN-TEAGQPPGLIVCAGSSLSLP-LPPLQVYDFLRNLEVRHQW 560
Score = 50 (22.7 bits), Expect = 5.4e-06, Sum P(3) = 5.4e-06
Identities = 22/63 (34%), Positives = 33/63 (52%)
Query: 571 PDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSSLEV---GPA--TNPAAGDSSSC 625
P P+LPSGF II DS P + + TL LT + ++ GP+ T+ DS++
Sbjct: 633 PSTIPILPSGF-IISRDSH-PSSSEVDGGSMTL-LTLAFQIFVTGPSYYTDLNLKDSATT 689
Query: 626 HHT 628
+T
Sbjct: 690 VNT 692
>TAIR|locus:2170194 [details] [associations]
symbol:HAT14 "homeobox from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00340 SMART:SM00389 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
EMBL:AP002032 EMBL:AJ431182 EMBL:BT005879 EMBL:AK227423 EMBL:U09334
IPI:IPI00522942 IPI:IPI00547278 PIR:T52367 RefSeq:NP_196289.2
RefSeq:NP_974743.1 UniGene:At.357 ProteinModelPortal:P46665
SMR:P46665 IntAct:P46665 PaxDb:P46665 PRIDE:P46665
EnsemblPlants:AT5G06710.1 GeneID:830560 KEGG:ath:AT5G06710
GeneFarm:3984 TAIR:At5g06710 eggNOG:NOG310615 InParanoid:P46665
OMA:KTSTPFY PhylomeDB:P46665 ProtClustDB:CLSN2917817
Genevestigator:P46665 Uniprot:P46665
Length = 336
Score = 136 (52.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 50/154 (32%), Positives = 75/154 (48%)
Query: 13 RESSSGSINKHQLDNG---KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNI 69
R +S S + +NG K +R + +Q LE + E S+L +Q I L N+
Sbjct: 171 RSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKE---HSTLNPKQKIALAKQL-NL 226
Query: 70 EPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL--VCENG 127
P+Q++VWFQNRR R K ++ + + R + L EEN RLQK+V +L + +
Sbjct: 227 RPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCES----LTEENRRLQKEVKELRTLKTST 282
Query: 128 YMKQQLRTAPATTDASCDSVVTTP-QHSLRDANN 160
QL T SC+ V T+ Q S A+N
Sbjct: 283 PFYMQLPATTLTMCPSCERVATSAAQPSTSAAHN 316
>TAIR|locus:2205075 [details] [associations]
symbol:ATHB13 species:3702 "Arabidopsis thaliana"
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA;IDA] [GO:0009744 "response to sucrose
stimulus" evidence=IMP] [GO:0009965 "leaf morphogenesis"
evidence=IMP] [GO:0048826 "cotyledon morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009744
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009965 GO:GO:0000976 KO:K09338 EMBL:AF208044
EMBL:AC013289 EMBL:AY057572 EMBL:AY133645 EMBL:AY086888
IPI:IPI00519626 PIR:H96719 RefSeq:NP_177136.1 UniGene:At.23736
UniGene:At.68137 ProteinModelPortal:Q8LC03 SMR:Q8LC03 STRING:Q8LC03
PaxDb:Q8LC03 PRIDE:Q8LC03 EnsemblPlants:AT1G69780.1 GeneID:843314
KEGG:ath:AT1G69780 GeneFarm:3958 TAIR:At1g69780 eggNOG:NOG250192
HOGENOM:HOG000006025 InParanoid:Q8LC03 OMA:NPILPSC PhylomeDB:Q8LC03
ProtClustDB:CLSN2682576 Genevestigator:Q8LC03 GO:GO:0048826
Uniprot:Q8LC03
Length = 294
Score = 128 (50.1 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 39/128 (30%), Positives = 60/128 (46%)
Query: 32 RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
R EQV+ LE+ + K R+ QL R ++P+QI +WFQNRR R K ++
Sbjct: 88 RLNMEQVKTLEKNFELGNKLEPERKMQLARAL----GLQPRQIAIWFQNRRARWKTKQLE 143
Query: 92 SRLQTVNRK---LTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSVV 148
T+ R+ L A N LL N +LQ ++ L +N + + T + SC +
Sbjct: 144 KDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGL--KNREQTESINLNKET-EGSCSNRS 200
Query: 149 TTPQHSLR 156
+LR
Sbjct: 201 DNSSDNLR 208
>RGD|2320224 [details] [associations]
symbol:LOC100364841 "rCG53272-like" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 RGD:2320224 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GeneTree:ENSGT00530000063899
IPI:IPI00959398 Ensembl:ENSRNOT00000035489 Uniprot:F1M524
Length = 96
Score = 107 (42.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 28/79 (35%), Positives = 39/79 (49%)
Query: 33 YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEAS 92
+T QVE +E ++ E P P L R +L R N+ ++KVWF NRR KQRK
Sbjct: 19 FTQWQVEEMENLFEETPYPDVLTRGELARTL----NVPEVKVKVWFSNRRA--KQRKNER 72
Query: 93 RLQTVNRKLTAMNKLLMEE 111
R N A + + M +
Sbjct: 73 RAMLRNMPSGAEDFIFMTD 91
>TAIR|locus:2202795 [details] [associations]
symbol:AtHB23 "homeobox protein 23" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009739 "response
to gibberellin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009739 GO:GO:0000976
KO:K09338 HOGENOM:HOG000006025 EMBL:AC005508 EMBL:BT009727
EMBL:AK228056 EMBL:AY084913 IPI:IPI00532646 PIR:F86396
RefSeq:NP_564268.1 UniGene:At.43561 ProteinModelPortal:Q8LFD3
SMR:Q8LFD3 STRING:Q8LFD3 PRIDE:Q8LFD3 EnsemblPlants:AT1G26960.1
GeneID:839587 KEGG:ath:AT1G26960 GeneFarm:3956 TAIR:At1g26960
eggNOG:NOG257807 InParanoid:Q8LFD3 OMA:LAFFPEN PhylomeDB:Q8LFD3
ProtClustDB:CLSN2917066 Genevestigator:Q8LFD3 GermOnline:AT1G26960
Uniprot:Q8LFD3
Length = 255
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 31/94 (32%), Positives = 51/94 (54%)
Query: 32 RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEA 91
R EQ++ALE+ + K S R+ +L R ++P+QI +WFQNRR R K ++
Sbjct: 74 RLNMEQLKALEKDFELGNKLESDRKLELARAL----GLQPRQIAIWFQNRRARSKTKQLE 129
Query: 92 SRLQTVNRKLTAM---NKLLMEENDRLQKQVSQL 122
+ R+ ++ N++L +N +LQ QV L
Sbjct: 130 KDYDMLKRQFESLRDENEVLQTQNQKLQAQVMAL 163
>TAIR|locus:2144578 [details] [associations]
symbol:HB51 "homeobox 51" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009965 "leaf
morphogenesis" evidence=IMP] [GO:0010434 "bract formation"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IGI] [GO:0048510 "regulation of timing of
transition from vegetative to reproductive phase" evidence=IGI]
[GO:0010582 "floral meristem determinacy" evidence=IGI] [GO:0048443
"stamen development" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 GO:GO:0006351
EMBL:AB005235 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009965
GO:GO:0048510 GO:GO:0010582 GO:GO:0000976 HOGENOM:HOG000006025
EMBL:AL162506 IPI:IPI00533817 IPI:IPI01019585 PIR:T48406
RefSeq:NP_195999.2 UniGene:At.54712 ProteinModelPortal:Q9LZR0
SMR:Q9LZR0 GeneID:831723 KEGG:ath:AT5G03790 GeneFarm:3983
TAIR:At5g03790 eggNOG:KOG0483 InParanoid:Q9LZR0 OMA:AHPRTEN
ArrayExpress:Q9LZR0 Genevestigator:Q9LZR0 GermOnline:AT5G03790
GO:GO:0010434 Uniprot:Q9LZR0
Length = 235
Score = 123 (48.4 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 34/119 (28%), Positives = 62/119 (52%)
Query: 29 KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
K R T+ Q+ +LER + E K S R+ +L RE ++P+QI VWFQNRR R K +
Sbjct: 77 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSREL----GLQPRQIAVWFQNRRARWKAK 132
Query: 89 KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTDASCDSV 147
+ ++ ++ +++ +D ++K + L+ + G +K+Q+ D+V
Sbjct: 133 QLEQLYDSLRQEYDVVSREKQMLHDEVKK-LRALLRDQGLIKKQISAGTIKVSGEEDTV 190
>TAIR|locus:2103396 [details] [associations]
symbol:HAT3 "homeobox-leucine zipper protein 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:AL138646 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683322 EMBL:U09338 EMBL:U09339 EMBL:AJ440781
EMBL:AY099565 EMBL:BT008713 IPI:IPI00525230 PIR:T47850 PIR:T52350
RefSeq:NP_191598.1 UniGene:At.21112 ProteinModelPortal:P46602
SMR:P46602 IntAct:P46602 EnsemblPlants:AT3G60390.1 GeneID:825210
KEGG:ath:AT3G60390 GeneFarm:3969 TAIR:At3g60390 eggNOG:NOG246006
InParanoid:P46602 OMA:IQNTWIN PhylomeDB:P46602
Genevestigator:P46602 GermOnline:AT3G60390 Uniprot:P46602
Length = 315
Score = 126 (49.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 49/162 (30%), Positives = 78/162 (48%)
Query: 14 ESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
+ GS N + K +R + EQ LE + E S+L +Q + L N+ +Q
Sbjct: 148 DDEDGSGNGDD-SSRKKLRLSKEQALVLEETFKE---HSTLNPKQKMALAKQL-NLRTRQ 202
Query: 74 IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL----VCENGYM 129
++VWFQNRR R K ++ + + R N L +EN RLQK+VS+L + + YM
Sbjct: 203 VEVWFQNRRARTKLKQTEVDCEYLKR--CCEN--LTDENRRLQKEVSELRALKLSPHLYM 258
Query: 130 KQQLRTAPATTDASCDSVVTTPQHS-----LRDANNPAGLLS 166
+ T T SC+ V T S + ++++P G +S
Sbjct: 259 HMKPPTT-LTMCPSCERVAVTSSSSSVAPPVMNSSSPMGPMS 299
>TAIR|locus:2115215 [details] [associations]
symbol:HB40 "homeobox protein 40" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0006950 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL161589 GO:GO:0000976
KO:K09338 HSSP:P10037 HOGENOM:HOG000034122 EMBL:Z99708
EMBL:BX827896 IPI:IPI00520900 PIR:H85433 RefSeq:NP_195392.2
UniGene:At.50404 ProteinModelPortal:O23208 SMR:O23208 PRIDE:O23208
EnsemblPlants:AT4G36740.1 GeneID:829827 KEGG:ath:AT4G36740
GeneFarm:3980 TAIR:At4g36740 eggNOG:NOG244411 InParanoid:O23208
OMA:NSYIDEA PhylomeDB:O23208 Genevestigator:O23208 Uniprot:O23208
Length = 216
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 36/112 (32%), Positives = 57/112 (50%)
Query: 13 RESSSGSINKHQLDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIE 70
R+ + GS+ NG + + T EQV LE + + K S R+ +L E ++
Sbjct: 37 RKKTKGSVASADGGNGLFRKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAEL----GLD 92
Query: 71 PKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
P+Q+ VWFQNRR R K + RL+ KL + ++ + RL+ +V QL
Sbjct: 93 PRQVAVWFQNRRARWKNK----RLEEEYNKLKNSHDNVVVDKCRLESEVIQL 140
>MGI|MGI:1277163 [details] [associations]
symbol:Vax1 "ventral anterior homeobox containing gene 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0007406
"negative regulation of neuroblast proliferation" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0007417 "central
nervous system development" evidence=IMP] [GO:0007420 "brain
development" evidence=IMP] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0035914 "skeletal muscle cell differentiation" evidence=IMP]
[GO:0043010 "camera-type eye development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0060021 "palate
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 MGI:MGI:1277163
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
GO:GO:0007406 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
GO:GO:0000976 GO:GO:0035914 GO:GO:0031490 eggNOG:NOG323848
GeneTree:ENSGT00680000099870 CTD:11023 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OMA:ASEDCNK EMBL:AF064554
EMBL:AB020495 EMBL:BC111818 IPI:IPI00135400 IPI:IPI00762603
RefSeq:NP_033527.1 UniGene:Mm.23801 ProteinModelPortal:Q2NKI2
SMR:Q2NKI2 STRING:Q2NKI2 PhosphoSite:Q2NKI2 PRIDE:Q2NKI2
Ensembl:ENSMUST00000172821 GeneID:22326 KEGG:mmu:22326
UCSC:uc008ibg.1 InParanoid:Q2NKI2 OrthoDB:EOG4H9XN9 NextBio:302557
Bgee:Q2NKI2 CleanEx:MM_VAX1 Genevestigator:Q2NKI2 Uniprot:Q2NKI2
Length = 338
Score = 125 (49.1 bits), Expect = 0.00014, P = 0.00014
Identities = 46/153 (30%), Positives = 66/153 (43%)
Query: 25 LDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 82
LD K R +TAEQ+ LE + C R +L R+ N+ Q+KVWFQNRR
Sbjct: 97 LDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQL----NLSETQVKVWFQNRR 152
Query: 83 CREK--QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQ--VSQLV--CENGYMKQQLR-- 134
++K Q K++ V+ + L + E RL + L+ C G + LR
Sbjct: 153 TKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALLPPCATGALGSALRGP 212
Query: 135 TAPAT-TDASCDSVVTTPQHSLRDANNPAGLLS 166
+ PA A+ S + A PAG S
Sbjct: 213 SLPALGAGAAAGSAAAAAAAAAATAPGPAGAAS 245
>TAIR|locus:2079542 [details] [associations]
symbol:HB-12 "homeobox 12" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009651 "response
to salt stress" evidence=IGI;RCA] [GO:0009737 "response to abscisic
acid stimulus" evidence=IEP;RCA;IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009615 "response to virus" evidence=IEP] [GO:0006970 "response
to osmotic stress" evidence=IEP] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0007275
GO:GO:0009737 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0045893 GO:GO:0009651 GO:GO:0009414 GO:GO:0003700
GO:GO:0006351 GO:GO:0009615 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 EMBL:AF001949 EMBL:AL138642 EMBL:AY059828
EMBL:BT002206 EMBL:AY087187 IPI:IPI00522302 PIR:T47981 PIR:T51751
RefSeq:NP_191748.1 UniGene:At.25517 HSSP:P02836
ProteinModelPortal:Q9M276 SMR:Q9M276 STRING:Q9M276
EnsemblPlants:AT3G61890.1 GeneID:825362 KEGG:ath:AT3G61890
GeneFarm:3970 TAIR:At3g61890 eggNOG:NOG252905 HOGENOM:HOG000006310
InParanoid:Q9M276 KO:K09338 OMA:HELMNIV PhylomeDB:Q9M276
ProtClustDB:CLSN2683559 Genevestigator:Q9M276 GermOnline:AT3G61890
Uniprot:Q9M276
Length = 235
Score = 121 (47.7 bits), Expect = 0.00015, P = 0.00015
Identities = 30/114 (26%), Positives = 63/114 (55%)
Query: 14 ESSSG-SINKHQLD-NGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEP 71
E SSG ++NK ++ + R++ EQ+++LE ++ + ++ Q+ RE ++P
Sbjct: 13 EISSGMTMNKKKMKKSNNQKRFSEEQIKSLELIFESETRLEPRKKVQVAREL----GLQP 68
Query: 72 KQIKVWFQNRRCREKQR---KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQL 122
+Q+ +WFQN+R R K + KE + L+ L + +++ +E L ++ +L
Sbjct: 69 RQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEKQSLVSELQRL 122
>TAIR|locus:2055028 [details] [associations]
symbol:HB4 "homeobox-leucine zipper protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS;IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009641 "shade
avoidance" evidence=IEP] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010218
"response to far red light" evidence=IEP] InterPro:IPR001356
InterPro:IPR003106 InterPro:IPR006712 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 Pfam:PF04618
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0009506 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009725 EMBL:AC002388
KO:K09338 HOGENOM:HOG000241612 EMBL:Y09582 EMBL:AJ441251
IPI:IPI00540244 PIR:T00402 RefSeq:NP_182018.1 UniGene:At.44957
ProteinModelPortal:P92953 SMR:P92953 PaxDb:P92953 PRIDE:P92953
EnsemblPlants:AT2G44910.1 GeneID:819100 KEGG:ath:AT2G44910
GeneFarm:3965 TAIR:At2g44910 eggNOG:NOG279137 InParanoid:P92953
OMA:RGGDENE PhylomeDB:P92953 ProtClustDB:CLSN2683322
ArrayExpress:P92953 Genevestigator:P92953 GermOnline:AT2G44910
GO:GO:0009641 Uniprot:P92953
Length = 318
Score = 124 (48.7 bits), Expect = 0.00015, P = 0.00015
Identities = 44/138 (31%), Positives = 63/138 (45%)
Query: 13 RESSSGSINKHQLDNG----KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
R SG + NG K +R + +Q LE + E S+L +Q + L N
Sbjct: 143 RGGGSGGSDDEDGGNGDGSRKKLRLSKDQALVLEETFKE---HSTLNPKQKLALAKQL-N 198
Query: 69 IEPKQIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGY 128
+ +Q++VWFQNRR R K ++ + + R N L EEN RLQK+VS+L
Sbjct: 199 LRARQVEVWFQNRRARTKLKQTEVDCEYLKR--CCDN--LTEENRRLQKEVSELRALKLS 254
Query: 129 MKQQLRTAPATTDASCDS 146
+ P TT C S
Sbjct: 255 PHLYMHMTPPTTLTMCPS 272
>MGI|MGI:2153518 [details] [associations]
symbol:Dmbx1 "diencephalon/mesencephalon homeobox 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008343 "adult feeding behavior" evidence=IGI;IMP] [GO:0008344
"adult locomotory behavior" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
MGI:MGI:2153518 GO:GO:0007420 GO:GO:0043565 GO:GO:0008344
GO:GO:0008343 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0005667 GO:GO:0000122 GO:GO:0048589
InterPro:IPR003654 Pfam:PF03826 PROSITE:PS50803
GeneTree:ENSGT00700000104128 HSSP:P06601 CTD:127343
eggNOG:NOG238265 HOGENOM:HOG000261650 HOVERGEN:HBG061416
OMA:PDTQLDT EMBL:AF448118 EMBL:AF499446 EMBL:AB037698 EMBL:AF421857
EMBL:AF421858 EMBL:AF463513 EMBL:AL627105 EMBL:BC050912
EMBL:AF461039 IPI:IPI00407603 IPI:IPI00752762 RefSeq:NP_001020738.1
RefSeq:NP_570935.3 UniGene:Mm.213206 UniGene:Mm.413175
ProteinModelPortal:Q91ZK4 SMR:Q91ZK4 MINT:MINT-1347271
STRING:Q91ZK4 PhosphoSite:Q91ZK4 PRIDE:Q91ZK4
Ensembl:ENSMUST00000064806 Ensembl:ENSMUST00000084338
Ensembl:ENSMUST00000124071 GeneID:140477 KEGG:mmu:140477
UCSC:uc008ufr.1 InParanoid:B1ASG1 OrthoDB:EOG4BCDNN NextBio:369772
Bgee:Q91ZK4 CleanEx:MM_DMBX1 Genevestigator:Q91ZK4
GermOnline:ENSMUSG00000028707 Uniprot:Q91ZK4
Length = 381
Score = 113 (44.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 47/200 (23%), Positives = 94/200 (47%)
Query: 14 ESSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
E+ GS +H+ +TA+Q+EALE+ + + P + R++L C +N+ +
Sbjct: 61 EARYGS--QHRKQRRSRTAFTAQQLEALEKTFQKTHYPDVVMRERLAM-C---TNLPEAR 114
Query: 74 IKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQL 133
++VWF+NRR + ++++ + + + + ++ A E + +V + +Q
Sbjct: 115 VQVWFKNRRAKFRKKQRSLQKEQLQKQKEA-------EGSHGEGKVEAPASDTQLETEQP 167
Query: 134 RTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMK 193
P+ D + ++ + S ++ P L E++ AE KA + ++PG K
Sbjct: 168 PGLPSG-DPPAELQLSLSEQSASESA-PEDQLDREEDSRAEE-PKAEKSPGSESKVPGCK 224
Query: 194 PG-P--DSVGIFAISQSCSG 210
G P DS G AI+ + G
Sbjct: 225 RGSPKADSPGSLAITPAAPG 244
Score = 56 (24.8 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 33/119 (27%), Positives = 45/119 (37%)
Query: 604 DLTSSLEVGPATNPAAGDSSSCH-HTRSVLTIAFQFPFESNLQDNVATMARQYVRSVISS 662
D SL + PA P G H ++ S L++ F+ E Q AT + S
Sbjct: 231 DSPGSLAITPAA-PGGGLLGPSHSYSSSPLSL-FRLQ-EQFRQHMAATNNLMHYSSFEVG 287
Query: 663 VQRVAMAICPSGLSPTLGPKLSPGSPEALTLAHWICQSYSYHLGAELLRSDSVGGDSVL 721
A A + P LG ++P L+ H CQSY L A V G +L
Sbjct: 288 GPAPAAAAAAAAAVPYLGVNMAP-----LSSLH--CQSYYQSLSAAAAAHQGVWGSPLL 339
>TAIR|locus:2084228 [details] [associations]
symbol:HB-1 "homeobox 1" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0009637
"response to blue light" evidence=IEP] [GO:0009651 "response to
salt stress" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] [GO:0015996 "chlorophyll catabolic process"
evidence=RCA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0009965 "leaf morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0045893
GO:GO:0042803 GO:GO:0009651 GO:GO:0043565 GO:GO:0003700
GO:GO:0006351 GO:GO:0009637 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009965 EMBL:AC009325 GO:GO:0000976 KO:K09338
HOGENOM:HOG000006025 EMBL:X58821 EMBL:AY058188 EMBL:AY098972
EMBL:M90416 IPI:IPI00536407 PIR:S16325 RefSeq:NP_186796.1
UniGene:At.41275 UniGene:At.47815 ProteinModelPortal:Q02283
SMR:Q02283 STRING:Q02283 EnsemblPlants:AT3G01470.1 GeneID:821138
KEGG:ath:AT3G01470 GeneFarm:3968 TAIR:At3g01470 eggNOG:NOG245596
InParanoid:Q02283 OMA:QVHLLEK PhylomeDB:Q02283
ProtClustDB:CLSN2684999 Genevestigator:Q02283 GermOnline:AT3G01470
Uniprot:Q02283
Length = 272
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 35/110 (31%), Positives = 60/110 (54%)
Query: 32 RYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR--- 88
R T EQV LE+ + K R+ QL ++ ++P+Q+ VWFQNRR R K +
Sbjct: 71 RLTTEQVHLLEKSFETENKLEPERKTQLAKKL----GLQPRQVAVWFQNRRARWKTKQLE 126
Query: 89 KEASRLQ-TVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAP 137
++ L+ T ++ L+ + ++M+ ND+L+ +V+ L E KQ+ P
Sbjct: 127 RDYDLLKSTYDQLLSNYDSIVMD-NDKLRSEVTSLT-EKLQGKQETANEP 174
>UNIPROTKB|F1N959 [details] [associations]
symbol:F1N959 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:AADN02072754 EMBL:AADN02072755
EMBL:AADN02072756 EMBL:AADN02072757 EMBL:AADN02072758
IPI:IPI00819883 Ensembl:ENSGALT00000024015 ArrayExpress:F1N959
Uniprot:F1N959
Length = 303
Score = 115 (45.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K+R
Sbjct: 143 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 191
Score = 50 (22.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 570 FPDDGPLLPS-GFRIIPLDSKTPDTPDTLTA 599
F + GP S G + + S+ PDTP+++ A
Sbjct: 268 FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 298
>UNIPROTKB|F1NZI9 [details] [associations]
symbol:PRRX2 "Paired mesoderm homeobox protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0002053 "positive regulation of mesenchymal cell
proliferation" evidence=IEA] [GO:0030326 "embryonic limb
morphogenesis" evidence=IEA] [GO:0042472 "inner ear morphogenesis"
evidence=IEA] [GO:0042474 "middle ear morphogenesis" evidence=IEA]
[GO:0045880 "positive regulation of smoothened signaling pathway"
evidence=IEA] [GO:0048701 "embryonic cranial skeleton
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0051216 "cartilage development" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR003654 Pfam:PF03826
PROSITE:PS50803 GeneTree:ENSGT00700000104279 GO:GO:0002053
GO:GO:0045880 IPI:IPI00579776 OMA:GVSMANS EMBL:AADN02026599
Ensembl:ENSGALT00000006733 Uniprot:F1NZI9
Length = 165
Score = 112 (44.5 bits), Expect = 0.00026, P = 0.00026
Identities = 37/155 (23%), Positives = 63/155 (40%)
Query: 16 SSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIK 75
S G + + + + Q++ALERV+ P + R++L R N+ +++
Sbjct: 6 SRGVAKRKKKQRRNRTTFNSSQLQALERVFERTHYPDAFVREELARRV----NLSEARVQ 61
Query: 76 VWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT 135
VWFQNRR + + R E + L NR + + E Y+ +
Sbjct: 62 VWFQNRRAKFR-RNERAML--ANRSASLLKSYSQEAAIEQPMAPRPTALSPEYLSWSSSS 118
Query: 136 APATTDASCDSVVTTPQHSLRDANNPAGLLSIAEE 170
+T + S TP + AN+ A L A+E
Sbjct: 119 PYSTVPSYSSSGTATPTQGVNMANSIASLRLKAKE 153
>UNIPROTKB|H9L2C7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0021526 "medial motor column neuron
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02073379 EMBL:AADN02073380
Ensembl:ENSGALT00000035845 OMA:ERSWHSK Uniprot:H9L2C7
Length = 237
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
TA+Q+E L+ Y PKP+ R+QL E + ++ + ++VWFQNRR +EK+ +K+A
Sbjct: 140 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 195
Query: 93 R 93
R
Sbjct: 196 R 196
>TAIR|locus:2129136 [details] [associations]
symbol:HB-2 "homeobox protein 2" species:3702
"Arabidopsis thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;ISS]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009826
"unidimensional cell growth" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0048364 "root development" evidence=IMP] [GO:0009735 "response
to cytokinin stimulus" evidence=IEP] [GO:0009641 "shade avoidance"
evidence=IEP] [GO:0010017 "red or far-red light signaling pathway"
evidence=IEP] [GO:0010218 "response to far red light" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0010016 "shoot system morphogenesis" evidence=IMP]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR006712 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02183 Pfam:PF04618 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00340 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0042803 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0008283
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 GO:GO:0010218
GO:GO:0048364 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009826
EMBL:AL161544 GO:GO:0009585 GO:GO:0000976 GO:GO:0010017 KO:K09338
GO:GO:0009641 EMBL:Z97342 EMBL:M90394 EMBL:Z19602 EMBL:X68145
EMBL:X68146 EMBL:AF375453 EMBL:AY081747 EMBL:EF193551 EMBL:EF193552
EMBL:EF193553 EMBL:EF193554 EMBL:EF193555 EMBL:EF193556
EMBL:EF193557 EMBL:EF193558 EMBL:EF193559 EMBL:EF193560
EMBL:EF193561 EMBL:EF193562 EMBL:EF193563 EMBL:EF193564
EMBL:EF193565 EMBL:AY174653 EMBL:AY174654 EMBL:AY174655
EMBL:AY174656 IPI:IPI00517186 PIR:S31424 RefSeq:NP_193411.1
UniGene:At.24419 UniGene:At.74809 ProteinModelPortal:Q05466
SMR:Q05466 IntAct:Q05466 STRING:Q05466 EnsemblPlants:AT4G16780.1
GeneID:827384 KEGG:ath:AT4G16780 GeneFarm:3977 TAIR:At4g16780
eggNOG:NOG150160 InParanoid:Q05466 OMA:EDGDNSR PhylomeDB:Q05466
ProtClustDB:CLSN2685845 Genevestigator:Q05466 GermOnline:AT4G16780
GO:GO:0010016 Uniprot:Q05466
Length = 284
Score = 120 (47.3 bits), Expect = 0.00034, P = 0.00033
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 14 ESSSGSINKHQLDNG-KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPK 72
+ S G + DN K +R + +Q LE + + + ++Q L ++ + +
Sbjct: 113 QGSRGISDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQL----GLRAR 168
Query: 73 QIKVWFQNRRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQ 132
Q++VWFQNRR R K ++ + + R N L EEN RLQK+V++L +
Sbjct: 169 QVEVWFQNRRARTKLKQTEVDCEFLRR--CCEN--LTEENRRLQKEVTELRALKLSPQFY 224
Query: 133 LRTAPATTDASCDS 146
+ +P TT C S
Sbjct: 225 MHMSPPTTLTMCPS 238
>UNIPROTKB|D6RBJ1 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HOGENOM:HOG000236304 HGNC:HGNC:6132
EMBL:AC010478 IPI:IPI00966899 ProteinModelPortal:D6RBJ1 SMR:D6RBJ1
Ensembl:ENST00000511384 ArrayExpress:D6RBJ1 Bgee:D6RBJ1
Uniprot:D6RBJ1
Length = 326
Score = 115 (45.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K+R
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 239
Score = 50 (22.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 570 FPDDGPLLPS-GFRIIPLDSKTPDTPDTLTA 599
F + GP S G + + S+ PDTP+++ A
Sbjct: 291 FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 321
>TAIR|locus:2062754 [details] [associations]
symbol:HB-7 "homeobox 7" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009409 "response to cold" evidence=RCA] [GO:0009414 "response
to water deprivation" evidence=IEP;RCA] [GO:0009737 "response to
abscisic acid stimulus" evidence=IEP;RCA] [GO:0009738 "abscisic
acid mediated signaling pathway" evidence=IGI;RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
GO:GO:0045893 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG252905 HOGENOM:HOG000006310
ProtClustDB:CLSN2683559 EMBL:X67032 EMBL:AC005819 EMBL:AY045826
EMBL:AY091364 IPI:IPI00544746 PIR:H84905 PIR:S47137
RefSeq:NP_182191.1 UniGene:At.136 ProteinModelPortal:P46897
SMR:P46897 STRING:P46897 EnsemblPlants:AT2G46680.1 GeneID:819280
KEGG:ath:AT2G46680 GeneFarm:3966 TAIR:At2g46680 InParanoid:P46897
OMA:THHESEN PhylomeDB:P46897 Genevestigator:P46897 Uniprot:P46897
Length = 258
Score = 119 (46.9 bits), Expect = 0.00034, P = 0.00034
Identities = 40/160 (25%), Positives = 72/160 (45%)
Query: 21 NKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQN 80
+ H +N + R++ EQ+++LE ++ + ++ QL RE ++P+Q+ +WFQN
Sbjct: 26 SNHNKNNQR--RFSDEQIKSLEMMFESETRLEPRKKVQLAREL----GLQPRQVAIWFQN 79
Query: 81 RRCREKQRKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQ--QLRTAPA 138
+R R K ++ L+T L L + + L+K+ LV E +K+ Q +T
Sbjct: 80 KRARWKSKQ----LETEYNILRQNYDNLASQFESLKKEKQALVSELQRLKEATQKKTQEE 135
Query: 139 TTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSK 178
S D V + ++ N EE E K
Sbjct: 136 ERQCSGDQAVVALSSTHHESENEENRRRKPEEVRPEMEMK 175
>FB|FBgn0002023 [details] [associations]
symbol:Lim3 "Lim3" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007399 "nervous system
development" evidence=TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HSSP:P50480 FlyBase:FBgn0002023
EMBL:BT003469 ProteinModelPortal:Q86P58 SMR:Q86P58 IntAct:Q86P58
STRING:Q86P58 PRIDE:Q86P58 InParanoid:Q86P58 ArrayExpress:Q86P58
Bgee:Q86P58 Uniprot:Q86P58
Length = 523
Score = 124 (48.7 bits), Expect = 0.00037, P = 0.00037
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 18 GSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVW 77
GS++ Q + TA+Q+E L+ Y+ PKP+ R+QL ++ + ++ + ++VW
Sbjct: 251 GSLDGDQPNKRPRTTITAKQLETLKTAYNNSPKPARHVREQLSQD----TGLDMRVVQVW 306
Query: 78 FQNRRCREKQ-RKEASR 93
FQNRR +EK+ +K+A R
Sbjct: 307 FQNRRAKEKRLKKDAGR 323
>UNIPROTKB|E1BWH2 [details] [associations]
symbol:E1BWH2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001102 "RNA polymerase
II activating transcription factor binding" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0001755 "neural crest cell migration"
evidence=IEA] [GO:0003139 "secondary heart field specification"
evidence=IEA] [GO:0003148 "outflow tract septum morphogenesis"
evidence=IEA] [GO:0003203 "endocardial cushion morphogenesis"
evidence=IEA] [GO:0003215 "cardiac right ventricle morphogenesis"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0010575 "positive regulation
vascular endothelial growth factor production" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA] [GO:0021524 "visceral motor neuron differentiation"
evidence=IEA] [GO:0021559 "trigeminal nerve development"
evidence=IEA] [GO:0021983 "pituitary gland development"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0032725 "positive regulation of granulocyte macrophage
colony-stimulating factor production" evidence=IEA] [GO:0032729
"positive regulation of interferon-gamma production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032731 "positive regulation of interleukin-1
beta production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0043425
"bHLH transcription factor binding" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045766 "positive regulation of angiogenesis"
evidence=IEA] [GO:0048880 "sensory system development"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] [GO:0050728 "negative regulation of
inflammatory response" evidence=IEA] [GO:0055010 "ventricular
cardiac muscle tissue morphogenesis" evidence=IEA] [GO:0060037
"pharyngeal system development" evidence=IEA] [GO:0060379 "cardiac
muscle cell myoblast differentiation" evidence=IEA] [GO:0060384
"innervation" evidence=IEA] [GO:0060413 "atrial septum
morphogenesis" evidence=IEA] [GO:0060913 "cardiac cell fate
determination" evidence=IEA] [GO:0071657 "positive regulation of
granulocyte colony-stimulating factor production" evidence=IEA]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0043524
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0090090 GO:GO:0001105
GO:GO:0001158 GO:GO:0042517 GeneTree:ENSGT00700000104050
GO:GO:0043388 GO:GO:0003266 IPI:IPI00598855 OMA:TDMGDMG
EMBL:AADN02072754 EMBL:AADN02072755 EMBL:AADN02072756
EMBL:AADN02072757 EMBL:AADN02072758 Ensembl:ENSGALT00000038907
ArrayExpress:E1BWH2 Uniprot:E1BWH2
Length = 339
Score = 115 (45.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K+R
Sbjct: 181 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 229
Score = 50 (22.7 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 570 FPDDGPLLPS-GFRIIPLDSKTPDTPDTLTA 599
F + GP S G + + S+ PDTP+++ A
Sbjct: 304 FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 334
>TAIR|locus:2150901 [details] [associations]
symbol:HB-3 "homeobox 3" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR003106
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183
PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000976 KO:K09338 HOGENOM:HOG000006025
ProtClustDB:CLSN2684985 EMBL:AL353993 EMBL:X62644 EMBL:AK229364
EMBL:U09340 IPI:IPI00541406 IPI:IPI00570430 PIR:S20930 PIR:T49950
PIR:T52370 RefSeq:NP_568309.2 UniGene:At.49022
ProteinModelPortal:Q00466 SMR:Q00466 EnsemblPlants:AT5G15150.1
GeneID:831367 KEGG:ath:AT5G15150 GeneFarm:3985 TAIR:At5g15150
eggNOG:NOG322183 InParanoid:Q00466 OMA:EERNNIN PhylomeDB:Q00466
Genevestigator:Q00466 GermOnline:AT5G15150 Uniprot:Q00466
Length = 314
Score = 120 (47.3 bits), Expect = 0.00042, P = 0.00042
Identities = 49/181 (27%), Positives = 82/181 (45%)
Query: 15 SSSGSINKHQLDNGKYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQI 74
S GS H + K R EQV ALE+ + K R+ QL + ++P+QI
Sbjct: 104 SDDGS---HMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKAL----GLQPRQI 156
Query: 75 KVWFQNRRCR--EKQ--------RKEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVC 124
+WFQNRR R KQ +K+ L++ N L A NK L E L+K +
Sbjct: 157 AIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKLHAELVALKKHDRK--- 213
Query: 125 ENGYMKQQLRTAPATTDASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAV 184
E+ +K++ A + + S ++ ++ DAN+ + + + ++ + T T +
Sbjct: 214 ESAKIKREFAEASWSNNGSTEN---NHNNNSSDANHVSMIKDLFPSSIRSATATTTSTHI 270
Query: 185 D 185
D
Sbjct: 271 D 271
>UNIPROTKB|P50211 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:L35567
IPI:IPI00598855 PIR:I50369 RefSeq:NP_990745.1 UniGene:Gga.1507
ProteinModelPortal:P50211 SMR:P50211 GeneID:396383 KEGG:gga:396383
CTD:3670 HOVERGEN:HBG004671 KO:K09370 NextBio:20816425
Uniprot:P50211
Length = 349
Score = 115 (45.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K+R
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 239
Score = 50 (22.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 570 FPDDGPLLPS-GFRIIPLDSKTPDTPDTLTA 599
F + GP S G + + S+ PDTP+++ A
Sbjct: 314 FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>UNIPROTKB|A6H796 [details] [associations]
symbol:ISL1 "ISL1 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA] [GO:0060913
"cardiac cell fate determination" evidence=IEA] [GO:0060413 "atrial
septum morphogenesis" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IEA]
[GO:0048880 "sensory system development" evidence=IEA] [GO:0045766
"positive regulation of angiogenesis" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032731 "positive
regulation of interleukin-1 beta production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=IEA] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0010575 "positive regulation vascular endothelial growth factor
production" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003148 "outflow tract
septum morphogenesis" evidence=IEA] [GO:0003139 "secondary heart
field specification" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001158 "enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0021559 GO:GO:0001158
GO:GO:0042517 GeneTree:ENSGT00700000104050 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0060413 GO:GO:0003266 eggNOG:COG5576 GO:GO:0003148
GO:GO:0003215 GO:GO:0060384 GO:GO:0021520 CTD:3670
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OMA:TDMGDMG
OrthoDB:EOG4G4GQR GO:GO:0048936 GO:GO:0060913 GO:GO:0060379
GO:GO:0048880 GO:GO:0021524 EMBL:DAAA02050419 EMBL:BC146163
IPI:IPI00854388 RefSeq:NP_001092600.1 UniGene:Bt.28168 SMR:A6H796
STRING:A6H796 Ensembl:ENSBTAT00000001638 GeneID:614040
KEGG:bta:614040 InParanoid:A6H796 NextBio:20898906 Uniprot:A6H796
Length = 349
Score = 115 (45.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K+R
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 239
Score = 50 (22.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 570 FPDDGPLLPS-GFRIIPLDSKTPDTPDTLTA 599
F + GP S G + + S+ PDTP+++ A
Sbjct: 314 FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>UNIPROTKB|P61371 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0003266 "regulation of secondary heart
field cardioblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0021520 "spinal cord motor
neuron cell fate specification" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0031103 "axon regeneration"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0060379 "cardiac muscle cell myoblast differentiation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=ISS] [GO:0010575 "positive
regulation vascular endothelial growth factor production"
evidence=ISS] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=ISS] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=ISS] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=ISS] [GO:0045766
"positive regulation of angiogenesis" evidence=ISS] [GO:0071657
"positive regulation of granulocyte colony-stimulating factor
production" evidence=ISS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IDA;NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0021522
"spinal cord motor neuron differentiation" evidence=ISS]
[GO:0048762 "mesenchymal cell differentiation" evidence=ISS]
[GO:0031016 "pancreas development" evidence=ISS] [GO:1901258
"positive regulation of macrophage colony-stimulating factor
production" evidence=ISS] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=ISS] [GO:0032730 "positive regulation of interleukin-1
alpha production" evidence=ISS] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0050728 "negative regulation of inflammatory response"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048936 "peripheral nervous system
neuron axonogenesis" evidence=ISS] [GO:0048665 "neuron fate
specification" evidence=ISS] [GO:0021559 "trigeminal nerve
development" evidence=ISS] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=ISS] [GO:0048880 "sensory system
development" evidence=ISS] [GO:0060384 "innervation" evidence=ISS]
[GO:0060413 "atrial septum morphogenesis" evidence=ISS] [GO:0060037
"pharyngeal system development" evidence=ISS] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=ISS]
[GO:0003215 "cardiac right ventricle morphogenesis" evidence=ISS]
[GO:0003151 "outflow tract morphogenesis" evidence=ISS] [GO:0003148
"outflow tract septum morphogenesis" evidence=ISS] [GO:0003139
"secondary heart field specification" evidence=IMP] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IPI] [GO:0060913 "cardiac cell fate
determination" evidence=IDA] [GO:0071385 "cellular response to
glucocorticoid stimulus" evidence=ISS] [GO:0032024 "positive
regulation of insulin secretion" evidence=IC] [GO:0090074 "negative
regulation of protein homodimerization activity" evidence=ISS]
[GO:0033147 "negative regulation of intracellular estrogen receptor
signaling pathway" evidence=ISS] [GO:0030331 "estrogen receptor
binding" evidence=ISS] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0050728 GO:GO:0008270 GO:GO:0071385 GO:GO:0045665
GO:GO:0043524 GO:GO:0032755 GO:GO:0010575 GO:GO:0032024
GO:GO:0003700 GO:GO:0045766 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0021522
GO:GO:0060037 GO:GO:0090090 GO:GO:0032731 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0030331 GO:GO:0021559
GO:GO:0001158 GO:GO:0042517 GO:GO:0048665 GO:GO:0032729
GO:GO:0032760 GO:GO:0016922 GO:GO:0031103 GO:GO:0055010
GO:GO:0003203 GO:GO:0048762 GO:GO:0003139 GO:GO:0031290
GO:GO:0043388 GO:GO:0032730 GO:GO:0032735 GO:GO:0071657
GO:GO:0060413 GO:GO:0033147 GO:GO:0003266 eggNOG:COG5576
GO:GO:0003148 GO:GO:0003215 GO:GO:0060384 GO:GO:0021520
GO:GO:0032725 CTD:3670 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OMA:TDMGDMG OrthoDB:EOG4G4GQR GO:GO:0048936
EMBL:S70721 EMBL:U07559 EMBL:BC031213 IPI:IPI00025071 PIR:I53277
RefSeq:NP_002193.2 UniGene:Hs.505 ProteinModelPortal:P61371
SMR:P61371 IntAct:P61371 STRING:P61371 PhosphoSite:P61371
DMDM:47606423 PRIDE:P61371 DNASU:3670 Ensembl:ENST00000230658
GeneID:3670 KEGG:hsa:3670 UCSC:uc003jor.3 GeneCards:GC05P050714
HGNC:HGNC:6132 MIM:600366 neXtProt:NX_P61371 PharmGKB:PA29932
InParanoid:P61371 PhylomeDB:P61371 GenomeRNAi:3670 NextBio:14363
ArrayExpress:P61371 Bgee:P61371 CleanEx:HS_ISL1
Genevestigator:P61371 GermOnline:ENSG00000016082 GO:GO:0060913
GO:GO:0060379 GO:GO:0090074 GO:GO:0048880 GO:GO:0021524
Uniprot:P61371
Length = 349
Score = 115 (45.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K+R
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 239
Score = 50 (22.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 570 FPDDGPLLPS-GFRIIPLDSKTPDTPDTLTA 599
F + GP S G + + S+ PDTP+++ A
Sbjct: 314 FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>MGI|MGI:101791 [details] [associations]
symbol:Isl1 "ISL1 transcription factor, LIM/homeodomain"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO;IDA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISO] [GO:0001755 "neural
crest cell migration" evidence=IGI] [GO:0003007 "heart
morphogenesis" evidence=IGI] [GO:0003139 "secondary heart field
specification" evidence=ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IGI] [GO:0003151 "outflow tract
morphogenesis" evidence=IGI] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IGI] [GO:0003215 "cardiac right ventricle
morphogenesis" evidence=IGI] [GO:0003266 "regulation of secondary
heart field cardioblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007507
"heart development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IDA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISO]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IGI] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IMP] [GO:0021524 "visceral motor neuron
differentiation" evidence=IGI] [GO:0021559 "trigeminal nerve
development" evidence=IMP] [GO:0021983 "pituitary gland
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IGI;IMP] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
[GO:0032024 "positive regulation of insulin secretion"
evidence=ISO] [GO:0032725 "positive regulation of granulocyte
macrophage colony-stimulating factor production" evidence=IDA]
[GO:0032729 "positive regulation of interferon-gamma production"
evidence=IDA] [GO:0032730 "positive regulation of interleukin-1
alpha production" evidence=IDA] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=IDA] [GO:0032735 "positive
regulation of interleukin-12 production" evidence=IDA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IDA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IDA] [GO:0033147 "negative regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0042517 "positive regulation of tyrosine phosphorylation of
Stat3 protein" evidence=IDA] [GO:0043388 "positive regulation of
DNA binding" evidence=IDA] [GO:0043425 "bHLH transcription factor
binding" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IGI] [GO:0045766 "positive regulation of
angiogenesis" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IDA;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IGI]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0048762
"mesenchymal cell differentiation" evidence=IMP] [GO:0048880
"sensory system development" evidence=IMP] [GO:0048936 "peripheral
nervous system neuron axonogenesis" evidence=IMP] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IGI] [GO:0060037 "pharyngeal system development"
evidence=IGI] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IMP] [GO:0060384 "innervation"
evidence=IMP] [GO:0060413 "atrial septum morphogenesis"
evidence=IGI] [GO:0060913 "cardiac cell fate determination"
evidence=ISO;IMP] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IDA] [GO:0090074
"negative regulation of protein homodimerization activity"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] [GO:1901258 "positive
regulation of macrophage colony-stimulating factor production"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101791 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008284 GO:GO:0001755 GO:GO:0050728
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0032755
GO:GO:0010575 GO:GO:0032024 GO:GO:0003700 GO:GO:0045766
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0032731
GO:GO:0031016 GO:GO:0021983 GO:GO:0001105 GO:GO:0021559
GO:GO:0001158 GO:GO:0042517 GO:GO:0032729 GO:GO:0032760
GeneTree:ENSGT00700000104050 GO:GO:0031103 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0032730 GO:GO:0032735 GO:GO:0071657 GO:GO:0060413
GO:GO:0003266 eggNOG:COG5576 GO:GO:0003148 GO:GO:0003215
GO:GO:0060384 GO:GO:0021520 GO:GO:0032725 CTD:3670
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OMA:TDMGDMG
OrthoDB:EOG4G4GQR GO:GO:0048936 GO:GO:0060913 GO:GO:0060379
GO:GO:0048880 GO:GO:0021524 EMBL:AJ132765 EMBL:AB104633
IPI:IPI00121604 IPI:IPI00415262 RefSeq:NP_067434.3 UniGene:Mm.42242
PDB:2RGT PDBsum:2RGT ProteinModelPortal:P61372 SMR:P61372
MINT:MINT-4594016 STRING:P61372 PhosphoSite:P61372 PRIDE:P61372
Ensembl:ENSMUST00000036060 Ensembl:ENSMUST00000176044 GeneID:16392
KEGG:mmu:16392 UCSC:uc007ryf.2 InParanoid:P61372
EvolutionaryTrace:P61372 NextBio:289537 Bgee:P61372 CleanEx:MM_ISL1
Genevestigator:P61372 GermOnline:ENSMUSG00000042258 Uniprot:P61372
Length = 349
Score = 115 (45.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K+R
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 239
Score = 50 (22.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 570 FPDDGPLLPS-GFRIIPLDSKTPDTPDTLTA 599
F + GP S G + + S+ PDTP+++ A
Sbjct: 314 FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>RGD|61957 [details] [associations]
symbol:Isl1 "ISL LIM homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA;ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA;ISO] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0001755 "neural
crest cell migration" evidence=IEA;ISO] [GO:0003007 "heart
morphogenesis" evidence=ISO] [GO:0003139 "secondary heart field
specification" evidence=IEA;ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IEA;ISO] [GO:0003151 "outflow tract
morphogenesis" evidence=ISO] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IEA;ISO] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA;ISO] [GO:0003266 "regulation
of secondary heart field cardioblast proliferation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007507 "heart development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010575 "positive regulation vascular endothelial
growth factor production" evidence=IEA;ISO] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IDA;IPI]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA;ISO] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=ISO] [GO:0021524 "visceral motor neuron
differentiation" evidence=IEA;ISO] [GO:0021559 "trigeminal nerve
development" evidence=IEA;ISO] [GO:0021983 "pituitary gland
development" evidence=IEA;ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0031016 "pancreas development" evidence=IEA;ISO] [GO:0031103
"axon regeneration" evidence=IEP] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0032024 "positive regulation of
insulin secretion" evidence=IMP] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA;ISO] [GO:0032729 "positive regulation of
interferon-gamma production" evidence=IEA;ISO] [GO:0032730 "positive
regulation of interleukin-1 alpha production" evidence=IEA;ISO]
[GO:0032731 "positive regulation of interleukin-1 beta production"
evidence=IEA;ISO] [GO:0032735 "positive regulation of interleukin-12
production" evidence=IEA;ISO] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA;ISO] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA;ISO]
[GO:0033147 "negative regulation of intracellular estrogen receptor
signaling pathway" evidence=IDA] [GO:0042517 "positive regulation of
tyrosine phosphorylation of Stat3 protein" evidence=IEA;ISO]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA;ISO]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA;ISO]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045766 "positive regulation
of angiogenesis" evidence=IEA;ISO] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048663 "neuron fate commitment" evidence=ISO] [GO:0048665
"neuron fate specification" evidence=ISO] [GO:0048762 "mesenchymal
cell differentiation" evidence=ISO] [GO:0048880 "sensory system
development" evidence=IEA;ISO] [GO:0048936 "peripheral nervous
system neuron axonogenesis" evidence=IEA;ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA;ISO] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA;ISO]
[GO:0060037 "pharyngeal system development" evidence=IEA;ISO]
[GO:0060379 "cardiac muscle cell myoblast differentiation"
evidence=IEA;ISO] [GO:0060384 "innervation" evidence=IEA;ISO]
[GO:0060413 "atrial septum morphogenesis" evidence=IEA;ISO]
[GO:0060913 "cardiac cell fate determination" evidence=IEA;ISO]
[GO:0071385 "cellular response to glucocorticoid stimulus"
evidence=IEP] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA;ISO] [GO:0090074
"negative regulation of protein homodimerization activity"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:1901258 "positive
regulation of macrophage colony-stimulating factor production"
evidence=ISO] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:61957 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0001755 GO:GO:0043565 GO:GO:0008270 GO:GO:0071385
GO:GO:0045944 GO:GO:0045665 GO:GO:0043524 GO:GO:0032024
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090
GO:GO:0031016 GO:GO:0021983 GO:GO:0001105 GO:GO:0030331
GO:GO:0021559 GO:GO:0001158 GO:GO:0042517
GeneTree:ENSGT00700000104050 GO:GO:0016922 GO:GO:0031103
GO:GO:0055010 GO:GO:0003203 GO:GO:0003139 GO:GO:0031290
GO:GO:0043388 GO:GO:0060413 GO:GO:0033147 GO:GO:0003266
eggNOG:COG5576 GO:GO:0003148 GO:GO:0003215 GO:GO:0060384
GO:GO:0021520 CTD:3670 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OMA:TDMGDMG OrthoDB:EOG4G4GQR GO:GO:0048936
GO:GO:0060913 GO:GO:0060379 GO:GO:0090074 GO:GO:0048880
GO:GO:0021524 EMBL:S69329 EMBL:AY557632 EMBL:X53258 IPI:IPI00201439
IPI:IPI00417237 PIR:I67417 RefSeq:NP_059035.3 UniGene:Rn.36202
ProteinModelPortal:P61374 SMR:P61374 STRING:P61374
PhosphoSite:P61374 PRIDE:P61374 Ensembl:ENSRNOT00000017305
GeneID:64444 KEGG:rno:64444 InParanoid:P61374 NextBio:613174
Genevestigator:P61374 GermOnline:ENSRNOG00000012556 Uniprot:P61374
Length = 349
Score = 115 (45.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K+R
Sbjct: 191 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 239
Score = 50 (22.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 570 FPDDGPLLPS-GFRIIPLDSKTPDTPDTLTA 599
F + GP S G + + S+ PDTP+++ A
Sbjct: 314 FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>ZFIN|ZDB-GENE-980526-112 [details] [associations]
symbol:isl1 "islet1" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IMP]
[GO:0031017 "exocrine pancreas development" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IGI;IMP]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0055011 "atrial cardiac muscle cell differentiation"
evidence=IMP] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-112 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0048665
GeneTree:ENSGT00700000104050 GO:GO:0031017 eggNOG:COG5576 CTD:3670
HOVERGEN:HBG004671 KO:K09370 EMBL:D21135 EMBL:AL954694
EMBL:BC060892 IPI:IPI00487340 PIR:I51739 RefSeq:NP_571037.1
UniGene:Dr.75106 ProteinModelPortal:P53405 SMR:P53405 STRING:P53405
Ensembl:ENSDART00000010896 GeneID:30147 KEGG:dre:30147
HOGENOM:HOG000236304 InParanoid:A2AWM5 OMA:TDMGDMG
OrthoDB:EOG4G4GQR NextBio:20806622 Bgee:P53405 GO:GO:0055011
GO:GO:0048936 Uniprot:P53405
Length = 349
Score = 115 (45.5 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K+R
Sbjct: 191 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 239
Score = 50 (22.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 570 FPDDGPLLPS-GFRIIPLDSKTPDTPDTLTA 599
F + GP S G + + S+ PDTP+++ A
Sbjct: 314 FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 344
>UNIPROTKB|Q5SQQ9 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007406 "negative regulation of
neuroblast proliferation" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0043010
"camera-type eye development" evidence=IEA] [GO:0060021 "palate
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0007420 GO:GO:0007406 EMBL:CH471066
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0043010 GO:GO:0060021 GO:GO:0000976
GO:GO:0031490 eggNOG:NOG323848 EMBL:AL731557 CTD:11023
HOGENOM:HOG000049217 HOVERGEN:HBG007558 KO:K09318 EMBL:AK127095
EMBL:BC101694 EMBL:BC101696 IPI:IPI00515064 IPI:IPI00749057
RefSeq:NP_001106175.1 RefSeq:NP_954582.1 UniGene:Hs.441536
ProteinModelPortal:Q5SQQ9 SMR:Q5SQQ9 STRING:Q5SQQ9
PhosphoSite:Q5SQQ9 DMDM:74743553 PRIDE:Q5SQQ9 DNASU:11023
Ensembl:ENST00000277905 Ensembl:ENST00000369206 GeneID:11023
KEGG:hsa:11023 UCSC:uc001ldb.1 UCSC:uc009xyx.3
GeneCards:GC10M118878 HGNC:HGNC:12660 HPA:HPA028946 MIM:604294
MIM:614402 neXtProt:NX_Q5SQQ9 PharmGKB:PA37283 InParanoid:Q5SQQ9
OMA:ASEDCNK GenomeRNAi:11023 NextBio:41888 Bgee:Q5SQQ9
CleanEx:HS_VAX1 Genevestigator:Q5SQQ9 Uniprot:Q5SQQ9
Length = 334
Score = 120 (47.3 bits), Expect = 0.00047, P = 0.00047
Identities = 43/150 (28%), Positives = 64/150 (42%)
Query: 25 LDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 82
LD K R +TAEQ+ LE + C R +L R+ N+ Q+KVWFQNRR
Sbjct: 97 LDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQL----NLSETQVKVWFQNRR 152
Query: 83 CREK--QRKEASRLQTVNRKLTAMNKLLMEENDRLQKQ--VSQLV--CENGYMKQQLRTA 136
++K Q K++ V+ + L + E RL + L+ C G + LR
Sbjct: 153 TKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRLLSPPGLPALLPPCATGALGSALR-G 211
Query: 137 PATTDASCDSVVTTPQHSLRDANNPAGLLS 166
P+ + + + A PAG S
Sbjct: 212 PSLPALGAGAAAGSAAAAAAAAPGPAGAAS 241
>UNIPROTKB|F1SMF7 [details] [associations]
symbol:ISL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA] [GO:0060913
"cardiac cell fate determination" evidence=IEA] [GO:0060413 "atrial
septum morphogenesis" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IEA]
[GO:0048880 "sensory system development" evidence=IEA] [GO:0045766
"positive regulation of angiogenesis" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032731 "positive
regulation of interleukin-1 beta production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=IEA] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0010575 "positive regulation vascular endothelial growth factor
production" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003148 "outflow tract
septum morphogenesis" evidence=IEA] [GO:0003139 "secondary heart
field specification" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001158 "enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0021559 GO:GO:0001158
GO:GO:0042517 GeneTree:ENSGT00700000104050 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0060413 GO:GO:0003266 GO:GO:0003148 GO:GO:0003215
GO:GO:0060384 GO:GO:0021520 OMA:TDMGDMG GO:GO:0048936 GO:GO:0060913
GO:GO:0060379 GO:GO:0048880 GO:GO:0021524 EMBL:CU915536
Ensembl:ENSSSCT00000018387 Uniprot:F1SMF7
Length = 361
Score = 115 (45.5 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K+R
Sbjct: 203 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 251
Score = 50 (22.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 570 FPDDGPLLPS-GFRIIPLDSKTPDTPDTLTA 599
F + GP S G + + S+ PDTP+++ A
Sbjct: 326 FSEGGPGSNSTGSEVASMSSQLPDTPNSMVA 356
>UNIPROTKB|F6QGM2 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0000988 EMBL:AADN02026398 IPI:IPI00820696
ProteinModelPortal:F6QGM2 Ensembl:ENSGALT00000006259
ArrayExpress:F6QGM2 Uniprot:F6QGM2
Length = 214
Score = 115 (45.5 bits), Expect = 0.00055, P = 0.00055
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKE 90
TA+Q+E L+ Y+ PKP+ R+QL E + ++ + ++VWFQNRR +EK+ K+
Sbjct: 162 TAKQLETLKNAYNNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKK 214
>UNIPROTKB|P53412 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0000988 eggNOG:NOG275246
GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 EMBL:L35570 IPI:IPI00651346 PIR:I50376
RefSeq:NP_001025506.1 UniGene:Gga.91 ProteinModelPortal:P53412
SMR:P53412 STRING:P53412 Ensembl:ENSGALT00000002663 GeneID:373940
KEGG:gga:373940 CTD:8022 InParanoid:P53412 OMA:PLCAGCN
NextBio:20813472 ArrayExpress:P53412 Uniprot:P53412
Length = 395
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
TA+Q+E L+ Y+ PKP+ R+QL E + ++ + ++VWFQNRR +EK+ +K+A
Sbjct: 162 TAKQLETLKNAYNNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 217
Query: 93 R 93
R
Sbjct: 218 R 218
>UNIPROTKB|P36200 [details] [associations]
symbol:lhx3 "LIM/homeobox protein Lhx3" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 KO:K09374 HOVERGEN:HBG006263
CTD:8022 EMBL:Z22702 EMBL:Z11589 PIR:S38821 RefSeq:NP_001081623.1
UniGene:Xl.32 ProteinModelPortal:P36200 SMR:P36200 GeneID:397959
KEGG:xla:397959 Xenbase:XB-GENE-865930 Uniprot:P36200
Length = 395
Score = 120 (47.3 bits), Expect = 0.00064, P = 0.00064
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
TA+Q+E L+ Y+ PKP+ R+QL E + ++ + ++VWFQNRR +EK+ +K+A
Sbjct: 162 TAKQLETLKNAYNNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 217
Query: 93 R 93
R
Sbjct: 218 R 218
>ZFIN|ZDB-GENE-980526-131 [details] [associations]
symbol:lhx3 "LIM homeobox 3" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-980526-131 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG275246 KO:K09374 HOVERGEN:HBG006263 CTD:8022 EMBL:U34590
IPI:IPI00486105 RefSeq:NP_571283.1 UniGene:Dr.570
ProteinModelPortal:Q90421 SMR:Q90421 STRING:Q90421 GeneID:30455
KEGG:dre:30455 NextBio:20806850 Uniprot:Q90421
Length = 398
Score = 120 (47.3 bits), Expect = 0.00065, P = 0.00065
Identities = 25/61 (40%), Positives = 41/61 (67%)
Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
TA+Q+E L+ Y+ PKP+ R+QL E + ++ + ++VWFQNRR +EK+ +K+A
Sbjct: 162 TAKQLETLKNAYNNSPKPARHVREQLSTE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 217
Query: 93 R 93
R
Sbjct: 218 R 218
>MGI|MGI:95843 [details] [associations]
symbol:Gsx2 "GS homeobox 2" species:10090 "Mus musculus"
[GO:0002087 "regulation of respiratory gaseous exchange by
neurological system process" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IGI;IMP] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0007420 "brain development"
evidence=IGI] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IGI] [GO:0021575 "hindbrain
morphogenesis" evidence=IMP] [GO:0021798 "forebrain dorsal/ventral
pattern formation" evidence=IMP] [GO:0021889 "olfactory bulb
interneuron differentiation" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048663 "neuron
fate commitment" evidence=IGI] [GO:0048665 "neuron fate
specification" evidence=IMP] [GO:0048853 "forebrain morphogenesis"
evidence=IMP] [GO:0060163 "subpallium neuron fate commitment"
evidence=IMP] InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:95843 GO:GO:0005634 GO:GO:0003677
GO:GO:0043565 GO:GO:0002087 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0048665 GO:GO:0021527 GO:GO:0060163 GO:GO:0021575
GO:GO:0021889 GO:GO:0021798 GO:GO:0048853 eggNOG:NOG264927
HOGENOM:HOG000010106 HOVERGEN:HBG003555 KO:K09310
GeneTree:ENSGT00700000104161 CTD:170825 OMA:AFCVCPL EMBL:S79041
IPI:IPI00133258 PIR:B37290 RefSeq:NP_573555.1 UniGene:Mm.218752
ProteinModelPortal:P31316 SMR:P31316 STRING:P31316 PRIDE:P31316
DNASU:14843 Ensembl:ENSMUST00000040477 GeneID:14843 KEGG:mmu:14843
UCSC:uc008xtx.1 InParanoid:P31316 NextBio:287071 Bgee:P31316
CleanEx:MM_GSX2 Genevestigator:P31316 GermOnline:ENSMUSG00000035946
Uniprot:P31316
Length = 305
Score = 118 (46.6 bits), Expect = 0.00066, P = 0.00066
Identities = 32/81 (39%), Positives = 46/81 (56%)
Query: 16 SSGSINKHQLDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQ 73
S G + Q+ NGK +R +T+ Q+ LER +S S LRR ++ N+ KQ
Sbjct: 191 SMGGSDTSQVPNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYL----NLSEKQ 246
Query: 74 IKVWFQNRRCREKQR-KEASR 93
+K+WFQNRR + K+ K ASR
Sbjct: 247 VKIWFQNRRVKHKKEGKGASR 267
>ZFIN|ZDB-GENE-030904-8 [details] [associations]
symbol:vax2 "ventral anterior homeobox 2"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=ISS] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0061386 "closure of optic fissure"
evidence=IMP] [GO:0090259 "regulation of retinal ganglion cell axon
guidance" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0021554 "optic nerve
development" evidence=IMP] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
ZFIN:ZDB-GENE-030904-8 GO:GO:0005634 GO:GO:0016055 GO:GO:0030900
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0060041 GO:GO:0000976 GO:GO:0061386 eggNOG:NOG309408
GeneTree:ENSGT00680000099870 GO:GO:0021554 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 GO:GO:0090259
EMBL:AY183363 IPI:IPI00501587 RefSeq:NP_919390.1 UniGene:Dr.88632
ProteinModelPortal:Q801E1 STRING:Q801E1 Ensembl:ENSDART00000081620
GeneID:373869 KEGG:dre:373869 CTD:25806 InParanoid:Q801E1
OMA:LSAVHRT NextBio:20813406 ArrayExpress:Q801E1 Bgee:Q801E1
Uniprot:Q801E1
Length = 307
Score = 118 (46.6 bits), Expect = 0.00067, P = 0.00067
Identities = 34/96 (35%), Positives = 47/96 (48%)
Query: 25 LDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 82
LD K R +TAEQ+ LE + C R +L R+ N+ Q+KVWFQNRR
Sbjct: 100 LDRPKRTRTSFTAEQLYRLELEFQRCQYVVGRERTELARQL----NLSETQVKVWFQNRR 155
Query: 83 CREK--QRKEAS-RLQTVNRKLTAMNKLLMEENDRL 115
++K Q K+ R + + L N L + E RL
Sbjct: 156 TKQKKDQTKDTDKRSSSTSESLATCNILRLLEQGRL 191
>UNIPROTKB|F1S681 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 GO:GO:0021526
OMA:LSFRDDQ EMBL:CU855640 EMBL:FP476046 Ensembl:ENSSSCT00000016925
Uniprot:F1S681
Length = 369
Score = 119 (46.9 bits), Expect = 0.00073, P = 0.00073
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
TA+Q+E L+ Y PKP+ R+QL E + ++ + ++VWFQNRR +EK+ +K+A
Sbjct: 144 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 199
Query: 93 R 93
R
Sbjct: 200 R 200
>UNIPROTKB|E1C654 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI00682449
Ensembl:ENSGALT00000033072 Uniprot:E1C654
Length = 219
Score = 114 (45.2 bits), Expect = 0.00078, P = 0.00078
Identities = 32/95 (33%), Positives = 46/95 (48%)
Query: 25 LDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 82
LD K R +TAEQ+ LE + C R +L R+ N+ Q+KVWFQNRR
Sbjct: 96 LDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQL----NLSETQVKVWFQNRR 151
Query: 83 CREK--QRKEASRLQTVNRKLTAMNKLLMEENDRL 115
++K Q K++ V+ + L + E RL
Sbjct: 152 TKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRL 186
>UNIPROTKB|F1P5G0 [details] [associations]
symbol:VAX1 "Ventral anterior homeobox 1" species:9031
"Gallus gallus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0003700
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000976 GeneTree:ENSGT00680000099870 EMBL:AADN02030950
EMBL:AADN02030951 EMBL:AADN02030952 IPI:IPI01017344
Ensembl:ENSGALT00000015072 Uniprot:F1P5G0
Length = 220
Score = 114 (45.2 bits), Expect = 0.00079, P = 0.00079
Identities = 32/95 (33%), Positives = 46/95 (48%)
Query: 25 LDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 82
LD K R +TAEQ+ LE + C R +L R+ N+ Q+KVWFQNRR
Sbjct: 96 LDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQL----NLSETQVKVWFQNRR 151
Query: 83 CREK--QRKEASRLQTVNRKLTAMNKLLMEENDRL 115
++K Q K++ V+ + L + E RL
Sbjct: 152 TKQKKDQGKDSELRSVVSETAATCSVLRLLEQGRL 186
>UNIPROTKB|E2QUC0 [details] [associations]
symbol:VAX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0043010 "camera-type eye
development" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007406 "negative
regulation of neuroblast proliferation" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000976 "transcription
regulatory region sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000047 InterPro:IPR001356 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00389 GO:GO:0005634 GO:GO:0007411
GO:GO:0001764 GO:GO:0007420 GO:GO:0007406 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010
GO:GO:0060021 GO:GO:0000976 GO:GO:0031490
GeneTree:ENSGT00680000099870 CTD:11023 KO:K09318 OMA:ASEDCNK
EMBL:AAEX03015564 EMBL:AAEX03015565 RefSeq:XP_865035.1
Ensembl:ENSCAFT00000018920 GeneID:486906 KEGG:cfa:486906
NextBio:20860611 Uniprot:E2QUC0
Length = 334
Score = 118 (46.6 bits), Expect = 0.00079, P = 0.00079
Identities = 61/209 (29%), Positives = 88/209 (42%)
Query: 25 LDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 82
LD K R +TAEQ+ LE + C R +L R+ N+ Q+KVWFQNRR
Sbjct: 97 LDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQL----NLSETQVKVWFQNRR 152
Query: 83 CREKQRK-EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTD 141
++K+ + + S L++V + A +L RL +Q +L+ G + L P T
Sbjct: 153 TKQKKDQGKDSELRSVVSETAATCSVL-----RLLEQ-GRLLSPPG-LPALL--PPCATG 203
Query: 142 ASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGI 201
A S + P A AG + A A TG A G PGP G
Sbjct: 204 A-LGSALRGPSLPALGAGAAAGSAAAA----AAAAPGPTGAASPHPPAVGGAPGPGPAGP 258
Query: 202 FAISQSCSGVAARACGLVSLE-PTKIAEI 229
+ +G A GL SL P+ + +
Sbjct: 259 GGLH---AGAPAAGHGLFSLPVPSLLGSV 284
>UNIPROTKB|F1NL45 [details] [associations]
symbol:MIXL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389
GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GeneTree:ENSGT00700000104128 EMBL:AADN02012178
EMBL:AADN02012179 IPI:IPI00590510 Ensembl:ENSGALT00000038807
ArrayExpress:F1NL45 Uniprot:F1NL45
Length = 116
Score = 97 (39.2 bits), Expect = 0.00079, P = 0.00079
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 29 KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
K +TA Q+E LE V+ + P R++L + I +I+VWFQNRR + +++
Sbjct: 6 KRTSFTAAQLETLELVFQDTMYPDIYLRERLADA----TQIPESRIQVWFQNRRAKSRRQ 61
Query: 89 KEASRLQTVNRKLTA 103
+ R + + LTA
Sbjct: 62 RGPPRPRRLPSPLTA 76
>RGD|621132 [details] [associations]
symbol:Vax1 "ventral anterior homeobox 1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000976
"transcription regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0007399 "nervous system development"
evidence=ISO] [GO:0007406 "negative regulation of neuroblast
proliferation" evidence=IEA;ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0007417 "central nervous system development"
evidence=ISO] [GO:0007420 "brain development" evidence=IEA;ISO]
[GO:0030154 "cell differentiation" evidence=ISO] [GO:0031490
"chromatin DNA binding" evidence=IEA;ISO] [GO:0035914 "skeletal
muscle cell differentiation" evidence=ISO] [GO:0043010 "camera-type
eye development" evidence=IEA;ISO] [GO:0060021 "palate development"
evidence=IEA;ISO] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621132
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
GO:GO:0007406 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
GO:GO:0000976 GO:GO:0031490 eggNOG:NOG323848
GeneTree:ENSGT00680000099870 CTD:11023 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OMA:ASEDCNK OrthoDB:EOG4H9XN9
EMBL:AF113515 IPI:IPI00203938 RefSeq:NP_072158.1 UniGene:Rn.48764
ProteinModelPortal:Q9JM00 Ensembl:ENSRNOT00000011743 GeneID:64571
KEGG:rno:64571 InParanoid:Q9JM00 NextBio:613524 ArrayExpress:Q9JM00
Genevestigator:Q9JM00 GermOnline:ENSRNOG00000008824 Uniprot:Q9JM00
Length = 336
Score = 118 (46.6 bits), Expect = 0.00080, P = 0.00080
Identities = 60/209 (28%), Positives = 87/209 (41%)
Query: 25 LDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 82
LD K R +TAEQ+ LE + C R +L R+ N+ Q+KVWFQNRR
Sbjct: 97 LDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQL----NLSETQVKVWFQNRR 152
Query: 83 CREKQRK-EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTD 141
++K+ + + S L++V + A +L RL +Q +L+ G + L P T
Sbjct: 153 TKQKKDQGKDSELRSVVSETAATCSVL-----RLLEQ-GRLLSPPG-LPALL--PPCATG 203
Query: 142 ASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGI 201
A S + P A AG S A A G A G PGP G
Sbjct: 204 A-LGSALRGPSLPALGAGAAAG--SAAAAAAAATAPGPAGAASQHPPAVGGAPGPGPAGP 260
Query: 202 FAISQSCSGVAARACGLVSLE-PTKIAEI 229
+ +G + GL SL P+ + +
Sbjct: 261 GGLH---AGAPTASHGLFSLPVPSLLGSV 286
>UNIPROTKB|Q9JM00 [details] [associations]
symbol:Vax1 "Ventral anterior homeobox 1" species:10116
"Rattus norvegicus" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 RGD:621132
GO:GO:0005634 GO:GO:0007411 GO:GO:0001764 GO:GO:0007420
GO:GO:0007406 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0043010 GO:GO:0060021
GO:GO:0000976 GO:GO:0031490 eggNOG:NOG323848
GeneTree:ENSGT00680000099870 CTD:11023 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OMA:ASEDCNK OrthoDB:EOG4H9XN9
EMBL:AF113515 IPI:IPI00203938 RefSeq:NP_072158.1 UniGene:Rn.48764
ProteinModelPortal:Q9JM00 Ensembl:ENSRNOT00000011743 GeneID:64571
KEGG:rno:64571 InParanoid:Q9JM00 NextBio:613524 ArrayExpress:Q9JM00
Genevestigator:Q9JM00 GermOnline:ENSRNOG00000008824 Uniprot:Q9JM00
Length = 336
Score = 118 (46.6 bits), Expect = 0.00080, P = 0.00080
Identities = 60/209 (28%), Positives = 87/209 (41%)
Query: 25 LDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 82
LD K R +TAEQ+ LE + C R +L R+ N+ Q+KVWFQNRR
Sbjct: 97 LDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQL----NLSETQVKVWFQNRR 152
Query: 83 CREKQRK-EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRTAPATTD 141
++K+ + + S L++V + A +L RL +Q +L+ G + L P T
Sbjct: 153 TKQKKDQGKDSELRSVVSETAATCSVL-----RLLEQ-GRLLSPPG-LPALL--PPCATG 203
Query: 142 ASCDSVVTTPQHSLRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGI 201
A S + P A AG S A A G A G PGP G
Sbjct: 204 A-LGSALRGPSLPALGAGAAAG--SAAAAAAAATAPGPAGAASQHPPAVGGAPGPGPAGP 260
Query: 202 FAISQSCSGVAARACGLVSLE-PTKIAEI 229
+ +G + GL SL P+ + +
Sbjct: 261 GGLH---AGAPTASHGLFSLPVPSLLGSV 286
>UNIPROTKB|F1MFM7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021526
CTD:89884 OMA:LSFRDDQ EMBL:DAAA02043487 EMBL:DAAA02043488
EMBL:DAAA02043489 EMBL:DAAA02043490 IPI:IPI00695061
RefSeq:NP_001179714.1 UniGene:Bt.60930 Ensembl:ENSBTAT00000005216
GeneID:540797 KEGG:bta:540797 NextBio:20878839 Uniprot:F1MFM7
Length = 390
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
TA+Q+E L+ Y PKP+ R+QL E + ++ + ++VWFQNRR +EK+ +K+A
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 220
Query: 93 R 93
R
Sbjct: 221 R 221
>UNIPROTKB|Q969G2 [details] [associations]
symbol:LHX4 "LIM/homeobox protein Lhx4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 EMBL:AL139141 Orphanet:226307
Orphanet:95496 eggNOG:NOG275246 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0 GO:GO:0021526 EMBL:AY053457
EMBL:AF179849 EMBL:AF405430 EMBL:AF405425 EMBL:AF405426
EMBL:AF405427 EMBL:AF405428 EMBL:AF405429 EMBL:BC011759
EMBL:AB055703 EMBL:AB037683 EMBL:AF282899 EMBL:AH011598
IPI:IPI00169275 RefSeq:NP_203129.1 UniGene:Hs.658487
ProteinModelPortal:Q969G2 SMR:Q969G2 IntAct:Q969G2 STRING:Q969G2
DMDM:209572644 PRIDE:Q969G2 DNASU:89884 Ensembl:ENST00000263726
GeneID:89884 KEGG:hsa:89884 UCSC:uc001goe.2 CTD:89884
GeneCards:GC01P180199 HGNC:HGNC:21734 MIM:262700 MIM:602146
neXtProt:NX_Q969G2 Orphanet:85442 PharmGKB:PA134962876
InParanoid:Q969G2 OMA:LSFRDDQ PhylomeDB:Q969G2 GenomeRNAi:89884
NextBio:76401 ArrayExpress:Q969G2 Bgee:Q969G2 CleanEx:HS_LHX4
Genevestigator:Q969G2 GermOnline:ENSG00000121454 Uniprot:Q969G2
Length = 390
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
TA+Q+E L+ Y PKP+ R+QL E + ++ + ++VWFQNRR +EK+ +K+A
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 220
Query: 93 R 93
R
Sbjct: 221 R 221
>MGI|MGI:101776 [details] [associations]
symbol:Lhx4 "LIM homeobox protein 4" species:10090 "Mus
musculus" [GO:0001890 "placenta development" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101776 GO:GO:0005634 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 PDB:3MMK PDBsum:3MMK HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0
GO:GO:0021526 CTD:89884 OMA:LSFRDDQ EMBL:BC049834 EMBL:AF135415
EMBL:U89343 EMBL:S71659 IPI:IPI00134772 PIR:S46332
RefSeq:NP_034842.2 UniGene:Mm.103624 UniGene:Mm.351266
ProteinModelPortal:P53776 SMR:P53776 STRING:P53776 PRIDE:P53776
Ensembl:ENSMUST00000027740 GeneID:16872 KEGG:mmu:16872
UCSC:uc007dbn.2 InParanoid:P53776 NextBio:290842 Bgee:P53776
CleanEx:MM_LHX4 Genevestigator:P53776 GermOnline:ENSMUSG00000026468
Uniprot:P53776
Length = 390
Score = 119 (46.9 bits), Expect = 0.00081, P = 0.00081
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
TA+Q+E L+ Y PKP+ R+QL E + ++ + ++VWFQNRR +EK+ +K+A
Sbjct: 165 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 220
Query: 93 R 93
R
Sbjct: 221 R 221
>UNIPROTKB|F1PCI5 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 GeneTree:ENSGT00700000104177
GO:GO:0021526 OMA:LSFRDDQ EMBL:AAEX03005118 EMBL:AAEX03005119
Ensembl:ENSCAFT00000031328 Uniprot:F1PCI5
Length = 395
Score = 119 (46.9 bits), Expect = 0.00082, P = 0.00082
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 34 TAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQ-RKEAS 92
TA+Q+E L+ Y PKP+ R+QL E + ++ + ++VWFQNRR +EK+ +K+A
Sbjct: 170 TAKQLETLKNAYKNSPKPARHVREQLSSE----TGLDMRVVQVWFQNRRAKEKRLKKDAG 225
Query: 93 R 93
R
Sbjct: 226 R 226
>UNIPROTKB|P53410 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOVERGEN:HBG004671 EMBL:L35568
IPI:IPI00574086 PIR:I50370 UniGene:Gga.790
ProteinModelPortal:P53410 SMR:P53410 Uniprot:P53410
Length = 319
Score = 112 (44.5 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 18/53 (33%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K++
Sbjct: 160 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKK 208
Score = 49 (22.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 570 FPDDGPL-LPSGFRIIPLDSKTPDTPDTL 597
F + G L SG + L S+ PDTP+++
Sbjct: 284 FSESGSLGTSSGSDVTSLSSQLPDTPNSM 312
>TAIR|locus:2059143 [details] [associations]
symbol:HAT9 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006473 "protein acetylation" evidence=RCA]
InterPro:IPR001356 InterPro:IPR003106 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 Pfam:PF02183 PROSITE:PS00027
PROSITE:PS50071 SMART:SM00340 SMART:SM00389 GO:GO:0005634
EMBL:AC004786 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 KO:K09338 HOGENOM:HOG000241612
ProtClustDB:CLSN2683864 EMBL:U09341 EMBL:U09342 EMBL:AJ441253
EMBL:AK229218 IPI:IPI00526618 PIR:A84617 PIR:T52371 PIR:T52372
RefSeq:NP_179865.1 UniGene:At.12844 UniGene:At.67823
ProteinModelPortal:P46603 SMR:P46603 EnsemblPlants:AT2G22800.1
GeneID:816811 KEGG:ath:AT2G22800 GeneFarm:3963 TAIR:At2g22800
eggNOG:NOG323848 InParanoid:P46603 OMA:MHMPAST PhylomeDB:P46603
Genevestigator:P46603 GermOnline:AT2G22800 Uniprot:P46603
Length = 274
Score = 116 (45.9 bits), Expect = 0.00086, P = 0.00086
Identities = 35/119 (29%), Positives = 60/119 (50%)
Query: 29 KYVRYTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
K +R T +Q LE + + + ++Q L R+ N+ P+Q++VWFQNRR R K +
Sbjct: 113 KKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQL----NLRPRQVEVWFQNRRARTKLK 168
Query: 89 KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGYMKQQLRT-APATTDASCDS 146
+ + + + + L +EN RLQK++ +L + + Q PA+T C S
Sbjct: 169 QTEVDCEFLKKCC----ETLADENIRLQKEIQEL--KTLKLTQPFYMHMPASTLTKCPS 221
>TAIR|locus:2173669 [details] [associations]
symbol:HB53 "homeobox 53" species:3702 "Arabidopsis
thaliana" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0009733 "response
to auxin stimulus" evidence=IEP] [GO:0048364 "root development"
evidence=TAS] InterPro:IPR000047 InterPro:IPR001356
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PRINTS:PR00031
PROSITE:PS00027 PROSITE:PS50071 SMART:SM00389 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0006950
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000976 eggNOG:NOG250192
HSSP:P01366 HOGENOM:HOG000034122 ProtClustDB:CLSN2683051
EMBL:AY683477 EMBL:AB018119 EMBL:BT024847 IPI:IPI00532925
RefSeq:NP_201471.1 UniGene:At.51263 ProteinModelPortal:Q9LVR0
SMR:Q9LVR0 PRIDE:Q9LVR0 EnsemblPlants:AT5G66700.1 GeneID:836803
KEGG:ath:AT5G66700 GeneFarm:3989 TAIR:At5g66700 InParanoid:Q9LVR0
OMA:ELAPETN PhylomeDB:Q9LVR0 Genevestigator:Q9LVR0
GermOnline:AT5G66700 Uniprot:Q9LVR0
Length = 228
Score = 114 (45.2 bits), Expect = 0.00088, P = 0.00088
Identities = 39/142 (27%), Positives = 69/142 (48%)
Query: 13 RESSSGSINKHQL-DNGKYVR---YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSN 68
R S + N+ + + G +R T EQV LE + K S R++++ E
Sbjct: 51 RSKGSSATNEEDVAEIGGMLRKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGEL----G 106
Query: 69 IEPKQIKVWFQNRRCREKQRK---EASRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCE 125
++P+Q+ VWFQNRR R K +K E ++L+ + + L + +L +Q+S+ E
Sbjct: 107 LDPRQVAVWFQNRRARWKNKKLEEEYAKLKNHHDNVVLGQCQLESQILKLTEQLSEAQSE 166
Query: 126 NGYMKQQLRTAPATTDASCDSV 147
+ ++L P + +S SV
Sbjct: 167 IRKLSERLEEMPTNSSSSSLSV 188
>ZFIN|ZDB-GENE-990415-133 [details] [associations]
symbol:isl2b "islet2b" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-990415-133 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG264882 GeneTree:ENSGT00700000104050 HOVERGEN:HBG004671
HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR EMBL:D38454 EMBL:AL845510
EMBL:BC095011 EMBL:U09404 IPI:IPI00485578 PIR:I51735
RefSeq:NP_571039.1 UniGene:Dr.20916 ProteinModelPortal:P53407
SMR:P53407 STRING:P53407 Ensembl:ENSDART00000055936 GeneID:30151
KEGG:dre:30151 CTD:30151 InParanoid:P53407 OMA:HAHKQAE
NextBio:20806624 Bgee:P53407 Uniprot:P53407
Length = 358
Score = 115 (45.5 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K+R
Sbjct: 201 KQLHTLRTCYNANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 249
Score = 47 (21.6 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 570 FPDDGPL-LPSGFRIIPLDSKTPDTPDTL 597
F + G L SG + L S+ PDTP+++
Sbjct: 323 FSESGSLGNSSGSDVTSLSSQLPDTPNSM 351
>UNIPROTKB|Q9UIW0 [details] [associations]
symbol:VAX2 "Ventral anterior homeobox 2" species:9606
"Homo sapiens" [GO:0000976 "transcription regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA]
[GO:0009950 "dorsal/ventral axis specification" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030900 "forebrain development" evidence=ISS]
[GO:0007398 "ectoderm development" evidence=TAS] [GO:0007601
"visual perception" evidence=TAS] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 GO:GO:0005634 GO:GO:0005737 EMBL:CH471053
GO:GO:0016055 GO:GO:0007601 GO:GO:0030900 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024
SUPFAM:SSF46689 GO:GO:0000122 GO:GO:0060041 GO:GO:0007409
GO:GO:0048048 GO:GO:0000976 GO:GO:0007398 GO:GO:0031490
GO:GO:0009950 eggNOG:NOG309408 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
EMBL:Y17791 EMBL:BT007035 EMBL:BC006336 IPI:IPI00018903
RefSeq:NP_036608.1 UniGene:Hs.249170 ProteinModelPortal:Q9UIW0
SMR:Q9UIW0 STRING:Q9UIW0 PhosphoSite:Q9UIW0 DMDM:20532295
PaxDb:Q9UIW0 PRIDE:Q9UIW0 DNASU:25806 Ensembl:ENST00000234392
GeneID:25806 KEGG:hsa:25806 UCSC:uc002shh.3 GeneCards:GC02P071127
HGNC:HGNC:12661 MIM:604295 neXtProt:NX_Q9UIW0 PharmGKB:PA37284
InParanoid:Q9UIW0 OMA:LGEADHC PhylomeDB:Q9UIW0 GenomeRNAi:25806
NextBio:47023 ArrayExpress:Q9UIW0 Bgee:Q9UIW0 CleanEx:HS_VAX2
Genevestigator:Q9UIW0 GermOnline:ENSG00000116035 Uniprot:Q9UIW0
Length = 290
Score = 110 (43.8 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 29/71 (40%), Positives = 38/71 (53%)
Query: 25 LDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 82
LD K R +TAEQ+ LE + C R +L R+ N+ Q+KVWFQNRR
Sbjct: 99 LDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQL----NLSETQVKVWFQNRR 154
Query: 83 CREKQRKEASR 93
KQ+K+ SR
Sbjct: 155 T--KQKKDQSR 163
Score = 49 (22.3 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 22/76 (28%), Positives = 33/76 (43%)
Query: 550 VDENAVGACSELVFAPIDEM-FPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSS 608
+++ A + SE FA + + + G LL S R L + TP P +HR L
Sbjct: 165 LEKRASSSASE-AFATSNILRLLEQGRLL-SVPRAPSLLALTPSLPGLPASHRGTSLGDP 222
Query: 609 LEVGPATNPAAGDSSS 624
P NP + S+S
Sbjct: 223 RNSSPRLNPLSSASAS 238
>MGI|MGI:1346018 [details] [associations]
symbol:Vax2 "ventral anterior homeobox containing gene 2"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0000976 "transcription regulatory region sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0009950 "dorsal/ventral axis
specification" evidence=IMP] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0043010 "camera-type eye development" evidence=IGI] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IDA;IMP] [GO:0060041 "retina
development in camera-type eye" evidence=IDA] InterPro:IPR000047
InterPro:IPR001356 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PRINTS:PR00031 PROSITE:PS00027 PROSITE:PS50071
SMART:SM00389 MGI:MGI:1346018 GO:GO:0005634 GO:GO:0005737
GO:GO:0016055 GO:GO:0030900 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 InterPro:IPR020479 PRINTS:PR00024 SUPFAM:SSF46689
GO:GO:0000122 GO:GO:0060041 GO:GO:0007409 GO:GO:0048048
GO:GO:0000976 GO:GO:0031490 GO:GO:0009950 eggNOG:NOG309408
GeneTree:ENSGT00680000099870 HOGENOM:HOG000049217
HOVERGEN:HBG007558 KO:K09318 OrthoDB:EOG4QVCD6 CTD:25806
OMA:LGEADHC EMBL:AB020498 EMBL:Y17792 EMBL:AF028715 IPI:IPI00123684
RefSeq:NP_036042.1 UniGene:Mm.307165 ProteinModelPortal:Q9WTP9
SMR:Q9WTP9 STRING:Q9WTP9 PhosphoSite:Q9WTP9 PRIDE:Q9WTP9
Ensembl:ENSMUST00000037807 GeneID:24113 KEGG:mmu:24113
InParanoid:Q9WTP9 NextBio:304143 Bgee:Q9WTP9 CleanEx:MM_VAX2
Genevestigator:Q9WTP9 GermOnline:ENSMUSG00000034777 Uniprot:Q9WTP9
Length = 292
Score = 110 (43.8 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 29/71 (40%), Positives = 38/71 (53%)
Query: 25 LDNGKYVR--YTAEQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRR 82
LD K R +TAEQ+ LE + C R +L R+ N+ Q+KVWFQNRR
Sbjct: 99 LDRPKRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQL----NLSETQVKVWFQNRR 154
Query: 83 CREKQRKEASR 93
KQ+K+ SR
Sbjct: 155 T--KQKKDQSR 163
Score = 49 (22.3 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 22/76 (28%), Positives = 32/76 (42%)
Query: 550 VDENAVGACSELVFAPIDEM-FPDDGPLLPSGFRIIPLDSKTPDTPDTLTAHRTLDLTSS 608
+++ A + SE FA + + + G LL S R L + TP P +HR L
Sbjct: 165 LEKRASSSASE-AFATSNVLRLLEQGRLL-SVPRAPSLLALTPGLPGLPASHRGTSLVDP 222
Query: 609 LEVGPATNPAAGDSSS 624
P NP S+S
Sbjct: 223 RNSSPRLNPMPSASAS 238
>UNIPROTKB|D6RAK3 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HGNC:HGNC:6132 EMBL:AC010478 IPI:IPI00966565
Ensembl:ENST00000505475 Bgee:D6RAK3 Uniprot:D6RAK3
Length = 260
Score = 115 (45.5 bits), Expect = 0.00099, P = 0.00099
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 36 EQVEALERVYSECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
+Q+ L Y+ P+P +L ++QL+ ++ + P+ I+VWFQN+RC++K+R
Sbjct: 127 KQLHTLRTCYAANPRPDALMKEQLVE----MTGLSPRVIRVWFQNKRCKDKKR 175
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.397 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 836 814 0.00099 121 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 71
No. of states in DFA: 629 (67 KB)
Total size of DFA: 415 KB (2200 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 72.62u 0.13s 72.75t Elapsed: 00:00:04
Total cpu time: 72.64u 0.13s 72.77t Elapsed: 00:00:04
Start: Sat May 11 11:20:43 2013 End: Sat May 11 11:20:47 2013