Query 003257
Match_columns 836
No_of_seqs 127 out of 151
Neff 3.8
Searched_HMMs 29240
Date Mon Mar 25 18:55:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003257.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003257hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2e26_A Reelin, reeler protein; 95.9 0.0039 1.3E-07 73.1 3.8 60 500-570 147-217 (725)
2 2ddu_A Reelin; beta-jelly-roll 95.2 0.0036 1.2E-07 68.9 0.2 33 530-572 192-226 (387)
3 2e26_A Reelin, reeler protein; 95.0 0.0064 2.2E-07 71.3 1.6 32 530-571 535-566 (725)
4 2ygo_A WIF-1, WNT inhibitory f 94.9 0.029 9.8E-07 56.5 5.6 32 530-570 149-180 (188)
5 1k36_A Epiregulin; EGF-like fo 89.1 0.26 9E-06 38.6 3.1 37 529-570 3-43 (46)
6 1a3p_A Epidermal growth factor 88.7 0.29 9.8E-06 37.7 3.1 34 535-572 10-43 (45)
7 1egf_A Epidermal growth factor 88.1 0.73 2.5E-05 36.6 5.2 40 529-572 3-46 (53)
8 1edm_B Factor IX; epidermal gr 87.4 0.34 1.2E-05 35.7 2.7 35 529-569 3-38 (39)
9 2rnl_A Amphiregulin; AR, color 86.1 0.48 1.6E-05 38.2 3.1 35 530-569 10-48 (50)
10 3e50_C Protransforming growth 85.9 0.48 1.6E-05 38.3 2.9 37 529-570 5-45 (50)
11 1xdt_R Hbegf, heparin-binding 85.4 0.33 1.1E-05 42.9 1.9 37 528-569 36-76 (79)
12 3u7u_G Neuregulin 1; signaling 84.7 0.9 3.1E-05 37.1 4.1 41 529-572 8-51 (55)
13 1hae_A Heregulin-alpha; growth 83.2 0.88 3E-05 37.1 3.5 38 531-571 8-48 (63)
14 1aut_L Activated protein C; se 80.8 0.68 2.3E-05 41.6 2.1 35 531-571 17-51 (114)
15 1iox_A Betacellulin; EGF-like 80.2 0.69 2.4E-05 37.1 1.7 37 529-570 5-45 (50)
16 1tpg_A T-plasminogen activator 79.9 1.9 6.5E-05 37.5 4.6 41 528-572 47-88 (91)
17 2k2s_B Micronemal protein 6; m 79.6 0.86 3E-05 38.0 2.2 36 530-571 12-51 (61)
18 3ltf_D Protein spitz; receptor 79.0 0.7 2.4E-05 37.9 1.5 40 529-570 4-48 (58)
19 2ygq_A WIF-1, WNT inhibitory f 77.7 0.8 2.7E-05 48.7 1.9 33 530-571 149-181 (324)
20 3cfw_A L-selectin; EGF, cell a 77.4 1.5 5.2E-05 40.8 3.5 56 505-571 100-156 (164)
21 1nql_B Epidermal growth factor 77.0 0.95 3.2E-05 36.4 1.7 39 530-572 4-46 (53)
22 4d90_A EGF-like repeat and dis 76.4 1.5 5E-05 40.0 3.0 36 531-570 2-38 (143)
23 1x7a_L Coagulation factor IX, 72.6 2 6.7E-05 40.6 2.9 38 528-571 47-85 (146)
24 3ca7_A Protein spitz; argos, E 71.5 1.6 5.4E-05 34.6 1.7 36 534-571 14-49 (52)
25 2p28_B Integrin beta-2; hybrid 68.6 1.7 5.8E-05 44.1 1.6 31 530-570 178-214 (217)
26 4d90_A EGF-like repeat and dis 68.6 4.5 0.00016 36.8 4.3 38 529-572 97-135 (143)
27 2wg3_C Hedgehog-interacting pr 68.2 1.1 3.8E-05 49.7 0.2 31 531-570 425-455 (463)
28 1q4g_A Prostaglandin G/H synth 68.0 5.8 0.0002 45.4 5.9 38 530-572 3-42 (553)
29 1g1s_A P-selectin; selectin, l 67.8 2 6.8E-05 39.9 1.8 56 505-571 100-156 (162)
30 2ygq_A WIF-1, WNT inhibitory f 67.0 2.9 9.9E-05 44.4 3.0 32 531-571 182-213 (324)
31 2bou_A EGF-like module contain 66.3 1.7 5.9E-05 39.9 1.0 28 530-566 3-30 (143)
32 2c4f_L Coagulation factor VII 63.2 3.5 0.00012 38.4 2.5 37 530-572 48-85 (142)
33 2vj3_A Neurogenic locus notch 63.1 4.2 0.00014 37.2 3.0 38 529-572 83-121 (135)
34 3h5c_B Vitamin K-dependent pro 63.1 3.4 0.00012 42.4 2.6 35 529-569 5-40 (317)
35 2vj3_A Neurogenic locus notch 61.5 4 0.00014 37.4 2.5 34 530-569 6-42 (135)
36 2vj2_A Jagged-1; signalling, p 60.8 5.1 0.00017 38.2 3.2 36 529-569 131-168 (169)
37 1gl4_A Nidogen-1, entactin; im 60.7 2.7 9.3E-05 44.7 1.4 37 529-571 5-46 (285)
38 3nt1_A Prostaglandin-endoperox 60.4 13 0.00043 43.1 6.9 37 530-571 2-40 (587)
39 3g5c_A ADAM 22; alpha/beta fol 58.9 2.8 9.5E-05 47.7 1.1 33 530-571 445-482 (510)
40 2p28_B Integrin beta-2; hybrid 56.9 4.3 0.00015 41.2 2.0 27 534-570 96-122 (217)
41 1nfu_B Coagulation factor XA, 53.7 2.7 9.4E-05 42.0 0.0 37 529-571 42-79 (195)
42 3asi_A Neurexin-1-alpha; beta- 52.3 6.1 0.00021 42.2 2.4 37 530-572 186-224 (410)
43 2vh0_B Activated factor XA lig 52.0 3 0.0001 38.5 0.0 37 529-571 42-79 (134)
44 3k6s_B Integrin beta-2; cell r 51.2 6.5 0.00022 46.3 2.5 32 529-570 557-592 (687)
45 2wg3_C Hedgehog-interacting pr 50.4 2.9 9.8E-05 46.4 -0.5 32 529-570 392-423 (463)
46 1g1t_A E-selectin; EGF, adhesi 50.4 5.7 0.0002 36.4 1.6 55 505-570 100-155 (157)
47 1z1y_A Ookinete surface protei 50.4 8.2 0.00028 36.9 2.7 38 529-572 139-177 (186)
48 2vj2_A Jagged-1; signalling, p 50.4 5.8 0.0002 37.8 1.7 30 531-569 67-97 (169)
49 3fcs_B Integrin beta-3; beta p 49.6 5.7 0.0002 46.7 1.8 31 529-569 525-559 (690)
50 2gy5_A Angiopoietin-1 receptor 48.7 6.2 0.00021 43.5 1.8 29 535-571 204-232 (423)
51 2pe4_A Hyaluronidase-1; hyalur 48.0 9.5 0.00032 42.7 3.1 17 556-572 398-414 (424)
52 3fcs_B Integrin beta-3; beta p 43.3 12 0.00043 43.9 3.3 33 528-570 563-600 (690)
53 1lmj_A Fibrillin 1; EGF, calci 42.0 8.7 0.0003 32.6 1.3 35 529-570 3-45 (86)
54 2p26_A Integrin beta-2; hybrid 42.0 7.5 0.00026 41.0 1.1 24 536-569 198-221 (280)
55 2gy5_A Angiopoietin-1 receptor 38.6 15 0.00053 40.3 2.9 29 534-570 250-278 (423)
56 2bou_A EGF-like module contain 38.2 24 0.00082 32.2 3.7 37 528-570 95-134 (143)
57 3qcw_A Neurexin-1-alpha; synap 37.7 17 0.00059 44.8 3.5 36 531-572 1019-1056(1245)
58 3k6s_B Integrin beta-2; cell r 37.3 11 0.00037 44.4 1.5 31 529-569 516-552 (687)
59 1uzk_A Fibrillin-1; glycoprote 31.6 22 0.00075 33.3 2.4 35 529-570 3-43 (162)
60 2i9a_A Urokinase-type plasmino 30.1 28 0.00094 33.2 2.8 37 530-571 11-47 (145)
61 1z6c_A Vitamin K-dependent pro 28.7 14 0.00048 31.4 0.5 34 530-570 4-44 (87)
62 1emn_A Fibrillin; extracellula 28.3 15 0.00052 31.0 0.6 35 529-570 5-43 (82)
63 1emn_A Fibrillin; extracellula 26.4 49 0.0017 27.8 3.4 32 529-567 44-77 (82)
64 2w86_A Fibrillin-1, fibrillin1 26.2 22 0.00076 32.7 1.3 33 529-568 4-37 (147)
65 3qcw_A Neurexin-1-alpha; synap 26.0 27 0.00091 43.2 2.4 36 530-571 620-657 (1245)
66 1z1y_A Ookinete surface protei 25.6 23 0.00077 33.9 1.3 38 529-569 44-88 (186)
67 2w86_A Fibrillin-1, fibrillin1 24.6 43 0.0015 30.7 3.0 34 528-568 106-142 (147)
68 1apq_A Complement protease C1R 24.5 40 0.0014 25.7 2.3 23 535-565 21-43 (53)
69 1yo8_A Thrombospondin-2; EGF, 23.4 44 0.0015 39.1 3.4 37 529-570 3-43 (634)
70 1nzi_A Complement C1S componen 22.4 60 0.002 29.8 3.5 36 527-570 115-158 (159)
71 1uzk_A Fibrillin-1; glycoprote 21.8 45 0.0015 31.1 2.5 34 528-568 121-157 (162)
72 1lmj_A Fibrillin 1; EGF, calci 21.8 55 0.0019 27.6 2.9 32 529-567 46-80 (86)
73 2fd6_A Urokinase-type plasmino 21.5 47 0.0016 30.5 2.5 34 535-571 2-35 (122)
No 1
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=95.89 E-value=0.0039 Score=73.13 Aligned_cols=60 Identities=25% Similarity=0.614 Sum_probs=41.7
Q ss_pred EEeeccCC-------cEEEEEEeeeCCCceE---EEEEEe-cccccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCC
Q 003257 500 YILYVREG-------TWGFGIRHVNTSKSET---VMSVSL-ERCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDC 568 (836)
Q Consensus 500 ~IpYPqtG-------tWYLsL~~~n~~~~~v---~~sisl-s~C~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdC 568 (836)
.||+|+.- .||.++ ++++...+ +-.+++ ..||..|++||+|.. |. .|+|++||.|.+|
T Consensus 147 ~~~~~~~~~~~~~rfrw~~~~--~~~~~~~~~~~~~~~~ig~~C~~~C~g~G~C~~-----~~----~C~C~~g~~g~~C 215 (725)
T 2e26_A 147 VVHFGKLHLCGSVRFRWYQGF--YPAGSQPVTWAIDNVYIGPQCEEMCYGHGSCIN-----GT----KCICDPGYSGPTC 215 (725)
T ss_dssp EEESTTTTCCEEEEEEEEEEE--ECTTCCCCCEEEEEEEEEECCGGGGGGSEEEET-----TT----EEEECTTEESTTS
T ss_pred EEeCCcccCCCceEEEEeccc--ccCCccccceEEeeEEecCCCccccCCCcEecC-----CC----eeeccCCcccCcc
Confidence 56655554 477766 66543221 112222 689999999999964 43 8999999999999
Q ss_pred Cc
Q 003257 569 SV 570 (836)
Q Consensus 569 td 570 (836)
+.
T Consensus 216 ~~ 217 (725)
T 2e26_A 216 KI 217 (725)
T ss_dssp CE
T ss_pred cc
Confidence 85
No 2
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=95.18 E-value=0.0036 Score=68.86 Aligned_cols=33 Identities=39% Similarity=0.935 Sum_probs=28.1
Q ss_pred cccccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcC--CCccc
Q 003257 530 ERCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFD--CSVEL 572 (836)
Q Consensus 530 s~C~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~Gwd--Ctd~s 572 (836)
.+||+.|++||.|.. | .|.|+.||.|.| |..+.
T Consensus 192 ~~Cp~~CsGhG~C~~-----g-----~C~Cd~G~~g~d~~C~~~~ 226 (387)
T 2ddu_A 192 EPCPSYCSGHGDCIS-----G-----VCFCDLGYTAAQGTCVSNT 226 (387)
T ss_dssp SCCGGGGGGSEEEET-----T-----EEEECTTEEEETTEEEESS
T ss_pred ccCccccCCCceecC-----C-----eEEecCCcccCCCcccccc
Confidence 479999999999953 4 899999999997 87643
No 3
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=95.01 E-value=0.0064 Score=71.34 Aligned_cols=32 Identities=41% Similarity=1.064 Sum_probs=29.4
Q ss_pred cccccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 530 ERCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 530 s~C~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
..||++|++||.|.. | .|.|+.||.|.+|...
T Consensus 535 ~~Cp~~C~ghG~C~~-----G-----~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 535 DGCLDMCSGHGRCVQ-----G-----SCVCDEQWGGLYCDEP 566 (725)
T ss_dssp SCSSGGGGGSEEEET-----T-----EEEECTTEESTTSCEE
T ss_pred CCCCcccCCCcEECC-----C-----CEeeCCCccCCCcCcc
Confidence 899999999999995 5 8999999999999854
No 4
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=94.85 E-value=0.029 Score=56.53 Aligned_cols=32 Identities=28% Similarity=0.797 Sum_probs=28.4
Q ss_pred cccccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 530 ERCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 530 s~C~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
.-|++.|.++|.|..- | .|+|.+||.|-+|..
T Consensus 149 ~~C~~~C~ngG~Cv~P----~-----~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 149 AECPGGCRNGGFCNER----R-----ICECPDGFHGPHCEG 180 (188)
T ss_dssp CCCTTCCCTTCEECTT----S-----CEECCTTCBTTTTCB
T ss_pred CccCCCCCCCCEeCCC----C-----cccCcCCCCCCCCcC
Confidence 5799999999999962 3 899999999999974
No 5
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=89.08 E-value=0.26 Score=38.59 Aligned_cols=37 Identities=27% Similarity=0.756 Sum_probs=26.8
Q ss_pred ecccc----cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 529 LERCP----KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 529 ls~C~----~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
..+|. +.|-+ |.|...... +.| .|.|.+||.|..|-.
T Consensus 3 i~~C~~~~~~pC~n-G~C~~~~~~-~~~---~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 3 ITKCSSDMNGYCLH-GQCIYLVDM-SQN---YCRCEVGYTGVRCEH 43 (46)
T ss_dssp EECCCTTCCSSCSS-EEEEEETTT-TEE---EEEECTTCSSTTSCC
T ss_pred cccCCCCCCCCCCC-CEeeccCCC-CCE---EEECCCCCccCCCCc
Confidence 35675 58966 999875322 223 799999999999964
No 6
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=88.68 E-value=0.29 Score=37.66 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=25.3
Q ss_pred CCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCccc
Q 003257 535 RCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVEL 572 (836)
Q Consensus 535 ~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~s 572 (836)
.|...|.|..... .|.| .|.|.+||.|..|..++
T Consensus 10 pC~ngg~C~~~~~-~~~~---~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 10 YCLNGGVXMHIES-LDSY---TCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CCSSSCEEEECTT-TSSE---EEECCTTEETTTTCEEC
T ss_pred CCCCCCEEEeecC-CCCE---EEEcCCCCcCCcCCccc
Confidence 6888899985322 2334 79999999999997543
No 7
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=88.13 E-value=0.73 Score=36.61 Aligned_cols=40 Identities=23% Similarity=0.459 Sum_probs=29.3
Q ss_pred eccccc----CCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCccc
Q 003257 529 LERCPK----RCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVEL 572 (836)
Q Consensus 529 ls~C~~----~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~s 572 (836)
..+|.. .|.+.|.|...... |.| .|.|.+||.|-.|....
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~-~~~---~C~C~~G~~G~~Ce~~~ 46 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESL-DSY---TCNCVIGYSGDRCQTRD 46 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSS-SCE---EEECCTTCCSSSSCCCS
T ss_pred cccCCCCCCCcCCCCcEEEeeCCC-CCE---EEECCCCCcCCcCCccC
Confidence 456754 69888999953222 334 79999999999997654
No 8
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=87.41 E-value=0.34 Score=35.74 Aligned_cols=35 Identities=23% Similarity=0.655 Sum_probs=27.0
Q ss_pred eccc-ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003257 529 LERC-PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 569 (836)
Q Consensus 529 ls~C-~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCt 569 (836)
...| .+.|...|.|.... |.| .|.|.+||.|..|.
T Consensus 3 ~d~C~~~pC~ngg~C~~~~---~~~---~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDI---NSY---ECWCPFGFEGKNCE 38 (39)
T ss_dssp CCTTTTCCCCTTCEEEEET---TEE---EEECCTTCCSTTSC
T ss_pred cccCCCCCCCCCCEeEcCC---Cce---EeECCCCCcCCccC
Confidence 3567 37898889998642 334 79999999999985
No 9
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=86.12 E-value=0.48 Score=38.24 Aligned_cols=35 Identities=26% Similarity=0.656 Sum_probs=27.4
Q ss_pred cccc----cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003257 530 ERCP----KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 569 (836)
Q Consensus 530 s~C~----~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCt 569 (836)
.+|+ +-|- ||+|.++.+.+ ...|.|..||.|.-|-
T Consensus 10 ~~C~~~~~~yC~-nG~C~~i~~~~----~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 10 NPCNAEFQNFCI-HGECKYIEHLE----AVTCKCQQEYFGERCG 48 (50)
T ss_dssp CTTTTTGGGTCS-SSEEEEETTTT----EEEEECCSSCCSSSCC
T ss_pred cccCchhhCcCC-CCEEEEecCCC----CeeEECCCCccccccc
Confidence 5787 5774 79999876443 3489999999999995
No 10
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=85.88 E-value=0.48 Score=38.34 Aligned_cols=37 Identities=30% Similarity=0.750 Sum_probs=27.9
Q ss_pred ecccc----cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 529 LERCP----KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 529 ls~C~----~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
..+|+ +-| -||+|......+. ..|.|.+||.|.-|-.
T Consensus 5 ~~~C~~~~~~yC-~nG~C~~~~~~~~----~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 5 FNDCPDSHTQFC-FHGTCRFLVQEDK----PACVCHSGYVGARCEH 45 (50)
T ss_pred ccccChhhcCcc-cCCEEeeccCCCC----eEEECCCCCcccCCCc
Confidence 46776 467 4799998754432 3999999999999953
No 11
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=85.43 E-value=0.33 Score=42.89 Aligned_cols=37 Identities=24% Similarity=0.641 Sum_probs=26.8
Q ss_pred Eecccc----cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003257 528 SLERCP----KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 569 (836)
Q Consensus 528 sls~C~----~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCt 569 (836)
..++|+ +.| -||.|..+...++ ..|.|..||.|.-|-
T Consensus 36 ~~~pC~~~~~~yC-lnG~C~~i~~~~~----~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 36 KRDPCLRKYKDFC-IHGECKYVKELRA----PSCICHPGYHGERCH 76 (79)
T ss_dssp ---CTTTTTTTCC-SSEEECCBGGGTB----CCEEECTTEESTTCC
T ss_pred cCCCCCccccCcC-CCCEeeeecCCCC----eEEEcCCCccccccc
Confidence 457897 688 5799987654332 279999999999995
No 12
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=84.68 E-value=0.9 Score=37.15 Aligned_cols=41 Identities=20% Similarity=0.415 Sum_probs=29.7
Q ss_pred ecccc-cCCCCCceeeeeec--cCCceEEeeeeeCCCCCCcCCCccc
Q 003257 529 LERCP-KRCSSHGQCRNAFD--ASGLTLYSFCACDRDHGGFDCSVEL 572 (836)
Q Consensus 529 ls~C~-~~Cg~~G~C~~l~~--~sG~~~ys~C~C~~Gy~GwdCtd~s 572 (836)
...|. +.|-+.|.|..+.. ..+.| .|.|.+||.|..|-..+
T Consensus 8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y---~C~C~~g~~G~~CE~~v 51 (55)
T 3u7u_G 8 CAEKEKTFCVNGGECFMVKDLSNPSRY---LCKCPNEFTGDRCQNYV 51 (55)
T ss_dssp CCSTTTTTSCTTCEEEEECCC--CCCE---EEEECTTEESTTSCEEC
T ss_pred CCCCcCCCCCCCCCcCCCCccCCCCCE---eEeCCCCCcCCCcCccC
Confidence 34564 67888999986532 22234 89999999999997654
No 13
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=83.21 E-value=0.88 Score=37.14 Aligned_cols=38 Identities=21% Similarity=0.489 Sum_probs=27.8
Q ss_pred cc-ccCCCCCceeeeeec--cCCceEEeeeeeCCCCCCcCCCcc
Q 003257 531 RC-PKRCSSHGQCRNAFD--ASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 531 ~C-~~~Cg~~G~C~~l~~--~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
+| .+.|.+.|.|..+.+ ..|.| .|.|.+||.|..|..+
T Consensus 8 ~C~~~pC~ngG~C~~~~~~~~~~~y---~C~C~~Gf~G~~Ce~~ 48 (63)
T 1hae_A 8 EKEKTFCVNGGECFMVKDLSNPSRY---LCKCQPGFTGARCTEN 48 (63)
T ss_dssp HHHHTTSCTTCEEEEEESSSSSCCE---EEECCTTEESTTSCEE
T ss_pred CCCCCcCCCCcEEecCCccCCCCCE---EEECCCCCcCCccCcC
Confidence 44 378988899997532 12334 7999999999999744
No 14
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=80.76 E-value=0.68 Score=41.59 Aligned_cols=35 Identities=31% Similarity=0.749 Sum_probs=27.8
Q ss_pred ccccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 531 RCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 531 ~C~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
+|...|..+|.|.-.. |.| .|.|.+||.|..|.+.
T Consensus 17 ~C~~~C~~~g~C~~~~---~~y---~C~C~~G~~G~~C~~~ 51 (114)
T 1aut_L 17 PCASLCCGHGTCIDGI---GSF---SCDCRSGWEGRFCQRE 51 (114)
T ss_dssp SSSSTTTTSEEECCCS---SCC---CEEECTTEESTTSCEE
T ss_pred cccccCCCcCCCCCCC---CCc---EeeCCCCCcCCCcCcC
Confidence 4667799999997542 334 7999999999999864
No 15
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=80.17 E-value=0.69 Score=37.14 Aligned_cols=37 Identities=32% Similarity=0.783 Sum_probs=28.3
Q ss_pred ecccc----cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 529 LERCP----KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 529 ls~C~----~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
..+|+ +-|-+ |+|..+...+ ...|.|..||.|.-|-.
T Consensus 5 ~~~C~~~~~~yC~n-G~C~~~~~~~----~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 5 FSRCPKQYKHYCIK-GRCRFVVAEQ----TPSCVCDEGYIGARCER 45 (50)
T ss_dssp CEECCGGGTTSCTT-CCEEEETTTT----EEEECCCTTEETTTTCE
T ss_pred ccccChhhcCcccC-CEEEeEcCCC----CeEEECCCCcccCCCCe
Confidence 36786 68855 9998875432 24899999999999964
No 16
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=79.90 E-value=1.9 Score=37.54 Aligned_cols=41 Identities=24% Similarity=0.686 Sum_probs=30.2
Q ss_pred Eecccc-cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCccc
Q 003257 528 SLERCP-KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVEL 572 (836)
Q Consensus 528 sls~C~-~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~s 572 (836)
...+|. +.|.+.|.|...... |.| .|.|.+||.|..|..++
T Consensus 47 ~~~~C~~~pC~ngg~C~~~~~~-~~~---~C~C~~G~~G~~Ce~~i 88 (91)
T 1tpg_A 47 PVKSCSEPRCFNGGTCQQALYF-SDF---VCQCPEGFAGKSCEIDT 88 (91)
T ss_dssp CEEECSSCCSCTTCEEEEESSS-SCE---EEECCTTCBSSSCCBCS
T ss_pred cCCcccCCCCCCCCEeecCCCC-CCe---EeECCCCCcCCcCCcCC
Confidence 346674 679889999975311 334 79999999999997544
No 17
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=79.63 E-value=0.86 Score=37.97 Aligned_cols=36 Identities=19% Similarity=0.643 Sum_probs=27.3
Q ss_pred ccc-ccCCCCC--ceeeeeeccCCceEEeeeeeCCCCC-CcCCCcc
Q 003257 530 ERC-PKRCSSH--GQCRNAFDASGLTLYSFCACDRDHG-GFDCSVE 571 (836)
Q Consensus 530 s~C-~~~Cg~~--G~C~~l~~~sG~~~ys~C~C~~Gy~-GwdCtd~ 571 (836)
.+| .+.|... |.|... .|+| .|.|.+||. |..|.+.
T Consensus 12 d~C~snPC~nga~gtC~~~---~g~y---~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 12 AACSSNPCGPEAAGTCKET---NSGY---ICRCNQGYRISLDGTGN 51 (61)
T ss_dssp CHHHHCSSCSSSCCEEEEC---SSEE---EEECCTTEEEEECSSSC
T ss_pred CcCcCCCCcCCCccccccC---CCce---EeECCCCCccCCCCCCC
Confidence 456 3678766 899864 2434 899999999 9999765
No 18
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=79.02 E-value=0.7 Score=37.89 Aligned_cols=40 Identities=25% Similarity=0.615 Sum_probs=27.9
Q ss_pred eccccc-----CCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 529 LERCPK-----RCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 529 ls~C~~-----~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
+.+|+. .|-+.|.|..... ++...| .|.|.+||.|..|..
T Consensus 4 ~~~C~~~~~~~pC~NGGtC~~~~~-~~~~~~-~C~C~~Gf~G~~Ce~ 48 (58)
T 3ltf_D 4 TYKCPETFDAWYCLNDAHCFAVKI-ADLPVY-SCECAIGFMGQRCEY 48 (58)
T ss_dssp CBCCCHHHHHHTSCSSCEEEEEEE-TTEEEE-EEEECTTEESSSSCE
T ss_pred cccCCccccCCcCCCCCEEeCCcc-CCCCCE-EeECCCCCccCCCcc
Confidence 467873 4988899985420 111122 699999999999964
No 19
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=77.74 E-value=0.8 Score=48.66 Aligned_cols=33 Identities=27% Similarity=0.793 Sum_probs=25.5
Q ss_pred cccccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 530 ERCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 530 s~C~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
..|++.|.++|.|.. .+ .|.|.+||.|.+|.++
T Consensus 149 ~~C~~~C~~~G~C~~----~~-----~C~C~~G~~G~~C~~~ 181 (324)
T 2ygq_A 149 AECPGGCRNGGFCNE----RR-----ICECPDGFHGPHCEKA 181 (324)
T ss_dssp CCCSSCCCSSCEECT----TS-----CEECCTTEESSSSCEE
T ss_pred CCCCCCCCCCCEECC----CC-----eEECCCCCcCCCCCCC
Confidence 588889999999974 12 6888888888888753
No 20
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=77.39 E-value=1.5 Score=40.75 Aligned_cols=56 Identities=23% Similarity=0.495 Sum_probs=37.2
Q ss_pred cCCcEEEEEEeeeCCCceEEEEEEecccc-cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 505 REGTWGFGIRHVNTSKSETVMSVSLERCP-KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 505 qtGtWYLsL~~~n~~~~~v~~sisls~C~-~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
..|.|.- ..|..... +-.-..+|+ +.|..+|.|..... ...|+|.+||.|--|.+.
T Consensus 100 ~~~~W~d---~~C~~~~~--fICe~~~~~~~~C~~~g~C~~~~~------~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 100 DAGKWND---DACHKLKA--ALCYTASCQPWSCSGHGECVEIIN------NYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp STTCEEE---ECTTSCEE--EEEEECCCCTTSSCSSEEEEEETT------EEEEEECTTCBSSSSCBC
T ss_pred CCCceeC---CCCCCCcE--eEEccCCCCCCcCCCCCeecccCC------CceeeeCCCccccccccc
Confidence 3677864 24543322 222234574 78999999997532 239999999999999754
No 21
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=77.01 E-value=0.95 Score=36.41 Aligned_cols=39 Identities=23% Similarity=0.412 Sum_probs=28.1
Q ss_pred cccc----cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCccc
Q 003257 530 ERCP----KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVEL 572 (836)
Q Consensus 530 s~C~----~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~s 572 (836)
.+|+ +.|-+.|.|...... |.| .|.|.+||.|..|....
T Consensus 4 ~~C~~~~~~pC~nGG~C~~~~~~-~~~---~C~C~~GytG~~Ce~~~ 46 (53)
T 1nql_B 4 SECPLSHDGYCLHDGVCMYIEAL-DKY---ACNCVVGYIGERCQYRD 46 (53)
T ss_dssp EECCSTTCCEECTTCEEEEETTT-TEE---EEEECTTEESTTSCEEC
T ss_pred cccCCCCCCCCCCCeEEeeecCC-CCE---EEecCCCCcCCCCCcCC
Confidence 4565 568778999853222 223 89999999999997544
No 22
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=76.37 E-value=1.5 Score=40.04 Aligned_cols=36 Identities=28% Similarity=0.689 Sum_probs=25.6
Q ss_pred cc-ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 531 RC-PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 531 ~C-~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
+| ++.|.++|.|...... |.| .|.|.+||.|..|.+
T Consensus 2 ~C~~~pC~~~g~C~~~~~~-g~~---~C~C~~G~~G~~C~~ 38 (143)
T 4d90_A 2 ICDPNPCENGGICLPGLAD-GSF---SCECPDGFTDPNCSS 38 (143)
T ss_dssp -CCSCCCGGGCEEEC------CC---EEECCTTCCTTTTCS
T ss_pred cCCCCcCCCCCEeeCCCCC-CCE---EeECCCCCCCCCCcc
Confidence 46 4789999999964321 223 799999999999986
No 23
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=72.60 E-value=2 Score=40.57 Aligned_cols=38 Identities=24% Similarity=0.719 Sum_probs=28.1
Q ss_pred Eeccc-ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 528 SLERC-PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 528 sls~C-~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
....| ++.|.+.|.|.-.. |.| .|.|.+||.|..|.+.
T Consensus 47 dideC~~~pC~n~g~C~~~~---~~y---~C~C~~G~~G~~C~~~ 85 (146)
T 1x7a_L 47 DGDQCEPNPCLNGGLCKDDI---NSY---ECWCQVGFEGKNCELD 85 (146)
T ss_dssp ---CCSSCSSCTTCEEEECS---SCE---EEECCSSEESTTTCEE
T ss_pred CcCcCCCCCCCCCCEeECCC---CCE---EEecCCCCcCCcCCCC
Confidence 34567 47898899998642 434 7999999999999864
No 24
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=71.53 E-value=1.6 Score=34.59 Aligned_cols=36 Identities=17% Similarity=0.300 Sum_probs=24.8
Q ss_pred cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 534 KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 534 ~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
+.|-+.|.|..... ++ .-.-.|.|.+||.|.-|...
T Consensus 14 ~pC~NGGtC~~~~~-~~-~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 14 WYCLNDAHCFAVKI-AD-LPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp HTSCTTCEEEEEEE-TT-EEEEEEECCTTEESTTSCEE
T ss_pred CcCCCCCEEecCcc-CC-CCCEEEECCCCCcCCCCccc
Confidence 46877899986421 01 11127999999999999754
No 25
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=68.60 E-value=1.7 Score=44.12 Aligned_cols=31 Identities=29% Similarity=0.750 Sum_probs=26.2
Q ss_pred cccccC----CCCC--ceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 530 ERCPKR----CSSH--GQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 530 s~C~~~----Cg~~--G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
..|+.+ |++| |.|.- | .|.|.+||.|.+|..
T Consensus 178 ~~C~~~~g~~C~~~~~G~C~~-----g-----~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 178 INCERYNGQVCGGPGRGLCFC-----G-----KCRCHPGFEGSACQH 214 (217)
T ss_dssp SCSCEETTEETTCTTTEEEET-----T-----EEEECTTEESTTSCE
T ss_pred ccCCCCCCCCCCCCCCcEEeC-----C-----eeECCCCCccCCcCC
Confidence 568765 9998 99983 4 899999999999975
No 26
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=68.59 E-value=4.5 Score=36.76 Aligned_cols=38 Identities=21% Similarity=0.603 Sum_probs=29.2
Q ss_pred ecccc-cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCccc
Q 003257 529 LERCP-KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVEL 572 (836)
Q Consensus 529 ls~C~-~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~s 572 (836)
...|. +.|..+|.|... .|.| .|.|.+||.|-.|....
T Consensus 97 i~~C~~~~C~~~~~C~~~---~g~~---~C~C~~G~~G~~c~~~~ 135 (143)
T 4d90_A 97 INECEVEPCKNGGICTDL---VANY---SCECPGEFMGRNCQYKG 135 (143)
T ss_dssp CCTTTTCCSCTTCEEEEE---TTEE---EEECCTTCBSTTSCBC-
T ss_pred CCcCCCCCCCCCCEeECC---CCCe---EeECCCCCccCCceecC
Confidence 45674 779999999864 2434 79999999999998643
No 27
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=68.21 E-value=1.1 Score=49.66 Aligned_cols=31 Identities=26% Similarity=0.719 Sum_probs=1.2
Q ss_pred ccccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 531 RCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 531 ~C~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
.|...|.++|.|... + .|.|.+||.|..|..
T Consensus 425 ~C~~~C~~~g~C~~~----~-----~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 425 KCEPACRHGGVCVRP----N-----KCLCKKGYLGPQCEQ 455 (463)
T ss_dssp CC--------------------------------------
T ss_pred cCCCCCCCCCEECCC----C-----EEECCCCcccCCCCC
Confidence 566677777777642 1 688888888888764
No 28
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=68.02 E-value=5.8 Score=45.37 Aligned_cols=38 Identities=21% Similarity=0.483 Sum_probs=29.4
Q ss_pred cccc-cCCCCCceeeeeeccCCceEEeeeeeC-CCCCCcCCCccc
Q 003257 530 ERCP-KRCSSHGQCRNAFDASGLTLYSFCACD-RDHGGFDCSVEL 572 (836)
Q Consensus 530 s~C~-~~Cg~~G~C~~l~~~sG~~~ys~C~C~-~Gy~GwdCtd~s 572 (836)
.+|. +.|.+.|.|.... .|+| .|.|. .||.|..|..+.
T Consensus 3 d~C~~~PC~ngG~C~~~~--~~~y---~C~C~~~G~~G~~Ce~~~ 42 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFG--LDRY---QCDCTRTGYSGPNCTIPE 42 (553)
T ss_dssp CGGGGCCCCTTCEEEEET--TTEE---EEECTTSSEETTTTCEEC
T ss_pred CcCCCCCCCCCCCcCCCC--CCce---EeeCCCCCcCCCCCCCCc
Confidence 4674 8899999998631 2334 89999 999999997654
No 29
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=67.80 E-value=2 Score=39.87 Aligned_cols=56 Identities=23% Similarity=0.498 Sum_probs=36.8
Q ss_pred cCCcEEEEEEeeeCCCceEEEEEEecccc-cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 505 REGTWGFGIRHVNTSKSETVMSVSLERCP-KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 505 qtGtWYLsL~~~n~~~~~v~~sisls~C~-~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
..|.|.- ..|..... .-.-..+|. +.|..+|.|.... |+| .|+|.+||.|-.|.+.
T Consensus 100 ~~~~W~d---~~C~~~~~--fICe~~~c~~~~C~~~g~C~~~~---~~~---~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 100 APGKWND---EHCLKKKH--ALCYTASCQDMSCSKQGECLETI---GNY---TCSCYPGFYGPECEYV 156 (162)
T ss_dssp STTCEEE---ECTTSCEE--EEEEECCCCTTGGGGSEEEEECS---SSE---EEEECTTEESTTSCEE
T ss_pred CCCeEEC---CCCCCCCC--EEEEeCCCcCCCCCCCCEEecCC---CCc---eEeCCCCCcCcccccC
Confidence 4677863 24543322 222225675 6798899999742 223 8999999999999764
No 30
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=67.05 E-value=2.9 Score=44.39 Aligned_cols=32 Identities=34% Similarity=0.915 Sum_probs=24.9
Q ss_pred ccccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 531 RCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 531 ~C~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
.|...|.++|.|.. .| .|.|.+||.|..|.++
T Consensus 182 ~C~~~C~~~G~C~~----~~-----~C~C~~G~~G~~C~~~ 213 (324)
T 2ygq_A 182 LCTPRCMNGGLCVT----PG-----FCICPPGFYGVNCDKA 213 (324)
T ss_dssp SSSSCCCTTCEECS----SC-----CEECCTTCBTTTTCBC
T ss_pred CCCCCCCCCCEEcC----CC-----EEeCCCCccCCCcccC
Confidence 57788988999974 23 7889999988888753
No 31
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=66.27 E-value=1.7 Score=39.92 Aligned_cols=28 Identities=32% Similarity=0.866 Sum_probs=23.7
Q ss_pred cccccCCCCCceeeeeeccCCceEEeeeeeCCCCCCc
Q 003257 530 ERCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGF 566 (836)
Q Consensus 530 s~C~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~Gw 566 (836)
..|++.|..+|.|.-. | .|.|++||.|.
T Consensus 3 ~~C~~~C~~~~~C~~~------~---~C~C~~G~~g~ 30 (143)
T 2bou_A 3 RGCARWCPQDSSCVNA------T---ACRCNPGFSSF 30 (143)
T ss_dssp CCCCTTCCTTEEESSS------S---CEEECTTEECS
T ss_pred CCCcCcCCCCCEEcCC------C---EEeCCCCCcCc
Confidence 5799999999999842 2 89999999983
No 32
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=63.24 E-value=3.5 Score=38.35 Aligned_cols=37 Identities=22% Similarity=0.700 Sum_probs=29.0
Q ss_pred ccc-ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCccc
Q 003257 530 ERC-PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVEL 572 (836)
Q Consensus 530 s~C-~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~s 572 (836)
..| ++.|.++|.|.... |.| .|.|.+||.|..|.+++
T Consensus 48 d~C~~~pC~n~g~C~~~~---g~y---~C~C~~G~~G~~C~~~~ 85 (142)
T 2c4f_L 48 DQCASSPCQNGGSCKDQL---QSY---ICFCLPAFEGRNCETHK 85 (142)
T ss_dssp CGGGGCCCCTTCEEEEET---TEE---EEECCTTEESTTSCEEG
T ss_pred CcCcCCCcCCCCEEeCCC---CCE---EeeCCCCccCCccccCc
Confidence 456 47898899998752 434 79999999999998743
No 33
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=63.07 E-value=4.2 Score=37.21 Aligned_cols=38 Identities=26% Similarity=0.715 Sum_probs=29.1
Q ss_pred ecccc-cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCccc
Q 003257 529 LERCP-KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVEL 572 (836)
Q Consensus 529 ls~C~-~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~s 572 (836)
...|. +.|..+|.|.... |.| .|.|.+||.|..|..++
T Consensus 83 ~~~C~~~~C~~~g~C~~~~---g~~---~C~C~~G~~G~~C~~~i 121 (135)
T 2vj3_A 83 TDECASSPCLHNGRCLDKI---NEF---QCECPTGFTGHLCQVDL 121 (135)
T ss_dssp CCTTTTCCSTTTCEEEECS---SCE---EEECCTTEESSSSCEEC
T ss_pred CCcccCCCcCCCCEeECCC---CCe---EEECCCCCcCCccCccC
Confidence 45674 7899999998642 334 89999999999996443
No 34
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=63.06 E-value=3.4 Score=42.44 Aligned_cols=35 Identities=23% Similarity=0.614 Sum_probs=27.7
Q ss_pred ecccc-cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003257 529 LERCP-KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 569 (836)
Q Consensus 529 ls~C~-~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCt 569 (836)
..+|. +.|.+.|.|.... |.| .|.|.+||.|..|.
T Consensus 5 ~~~C~~~pC~~~g~C~~~~---~~~---~C~C~~g~~g~~C~ 40 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSI---WGY---TCTCSPGYEGSNCE 40 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCS---SSC---CCCCSSSCCSSSSC
T ss_pred CCcCCCCCCCCCCEeECCC---CCe---EEECCCCCcCCccc
Confidence 46785 7899999998643 334 79999999999997
No 35
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=61.53 E-value=4 Score=37.37 Aligned_cols=34 Identities=29% Similarity=0.773 Sum_probs=23.3
Q ss_pred cccc---cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003257 530 ERCP---KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 569 (836)
Q Consensus 530 s~C~---~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCt 569 (836)
..|. +.|.++|.|.... |.| .|.|.+||.|..|.
T Consensus 6 deC~~~~~~C~~~g~C~~~~---g~~---~C~C~~Gy~G~~C~ 42 (135)
T 2vj3_A 6 DECSLGANPCEHAGKCINTL---GSF---ECQCLQGYTGPRCE 42 (135)
T ss_dssp CTTTSSSCSSSTTCEEEECS---SSE---EEECCTTEESTTSC
T ss_pred ccccCCCCCCCCCCEeECCC---CCE---EEECCCCCcCCccc
Confidence 4564 5687888887542 333 78888888888875
No 36
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=60.82 E-value=5.1 Score=38.24 Aligned_cols=36 Identities=28% Similarity=0.660 Sum_probs=27.3
Q ss_pred ecccc--cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003257 529 LERCP--KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 569 (836)
Q Consensus 529 ls~C~--~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCt 569 (836)
...|. +.|.++|.|..... |.+ .|.|++||.|..|.
T Consensus 131 ~~~C~~~~~C~~~g~C~~~~~--~~~---~C~C~~G~~G~~Ce 168 (169)
T 2vj2_A 131 LNYCGTHQPCLNGGTCSNTGP--DKY---QCSCPEGYSGPNCE 168 (169)
T ss_dssp SCHHHHTCCCCTTCEEEECST--TCE---EEECCTTCCSTTSC
T ss_pred CCCCCCCCCCCCCCEEcCCCC--CCc---EeECCCCCcCcCcC
Confidence 35664 78999999987422 223 89999999999995
No 37
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=60.69 E-value=2.7 Score=44.69 Aligned_cols=37 Identities=30% Similarity=0.678 Sum_probs=28.4
Q ss_pred eccc---ccCCCCCceeeeeeccCCceEEeeeeeCCCCC--CcCCCcc
Q 003257 529 LERC---PKRCSSHGQCRNAFDASGLTLYSFCACDRDHG--GFDCSVE 571 (836)
Q Consensus 529 ls~C---~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~--GwdCtd~ 571 (836)
...| ..+|+.++.|.-.. |.| .|.|++||. |..|.|.
T Consensus 5 iDEC~~~~~~C~~~a~C~Nt~---Gsy---~C~C~~Gy~GnG~~C~d~ 46 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAECRDYA---TGF---CCRCVANYTGNGRQCVAE 46 (285)
T ss_dssp --CHHHHGGGSCTTEEEEECS---SCE---EEEECTTEEECSSSEEET
T ss_pred chhccCCCCCCCCCCEeEcCC---CCe---EEEcCCCCCCCCCcCCCC
Confidence 4567 47999999999743 556 999999998 6679875
No 38
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=60.36 E-value=13 Score=43.12 Aligned_cols=37 Identities=22% Similarity=0.562 Sum_probs=28.4
Q ss_pred cccc-cCCCCCceeeeeeccCCceEEeeeeeC-CCCCCcCCCcc
Q 003257 530 ERCP-KRCSSHGQCRNAFDASGLTLYSFCACD-RDHGGFDCSVE 571 (836)
Q Consensus 530 s~C~-~~Cg~~G~C~~l~~~sG~~~ys~C~C~-~Gy~GwdCtd~ 571 (836)
.+|. +.|-+.|.|.... .|.| .|.|. .||.|..|...
T Consensus 2 d~C~s~PC~ngG~C~~~~--~~~y---~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTG--FDQY---KCDCTRTGFYGENCTTP 40 (587)
T ss_dssp CTTTTCCCCTTCEEEEEE--TTEE---EEECTTSSEETTTTCEE
T ss_pred CCCCCCCCCCCCEeeCCC--CCCe---EEecCCCCccCCCCCCc
Confidence 5684 8898899999422 1334 69999 99999999764
No 39
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=58.92 E-value=2.8 Score=47.66 Aligned_cols=33 Identities=36% Similarity=0.788 Sum_probs=27.6
Q ss_pred cccc-----cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 530 ERCP-----KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 530 s~C~-----~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
+.|+ ..|++||.|-.. + .|+|.+||.+.+|...
T Consensus 445 ~~C~~~~~~~~C~~~GVCNn~----~-----~CHC~~GwaPP~C~~~ 482 (510)
T 3g5c_A 445 STCLSSKEGTICSGNGVCSNE----L-----KCVCNRHWIGSDCNTY 482 (510)
T ss_dssp CCCCCSSTTCSGGGTEEEBTT----S-----CEEECTTEESTTSCEE
T ss_pred cCCCCcccccccCCCCeeCCC----C-----CcCCCCCCCCCCCCCC
Confidence 3786 579999999853 2 7999999999999864
No 40
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=56.87 E-value=4.3 Score=41.17 Aligned_cols=27 Identities=30% Similarity=0.696 Sum_probs=23.5
Q ss_pred cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 534 KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 534 ~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
..|++||.|.- | .|.|.+||.|..|.-
T Consensus 96 ~~Csg~G~C~~-----g-----~C~C~~G~~G~~Cec 122 (217)
T 2p28_B 96 SLCHGKGFLEC-----G-----ICRCDTGYIGKNCEC 122 (217)
T ss_dssp CTTTTSEEEET-----T-----EEEECTTEESTTSCE
T ss_pred CccCCCceEEC-----C-----EEECCCCccCCcccc
Confidence 47999999973 4 899999999999973
No 41
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=53.67 E-value=2.7 Score=42.02 Aligned_cols=37 Identities=24% Similarity=0.769 Sum_probs=0.0
Q ss_pred eccc-ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 529 LERC-PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 529 ls~C-~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
...| .+.|...|.|.-.. |+| .|.|.+||.|..|.++
T Consensus 42 ideC~~~pC~ngg~C~n~~---g~y---~C~C~~Gf~G~~Ce~~ 79 (195)
T 1nfu_B 42 GDQCETSPCQNQGKCKDGL---GEY---TCTCLEGFEGKNCELF 79 (195)
T ss_dssp --------------------------------------------
T ss_pred CcccCCCCCCCCCEeECCC---CCe---eEeCCCCceecccccc
Confidence 3566 36798889998642 334 7999999999999864
No 42
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=52.28 E-value=6.1 Score=42.23 Aligned_cols=37 Identities=24% Similarity=0.563 Sum_probs=28.7
Q ss_pred cccc-cCCCCCceeeeeeccCCceEEeeeeeCC-CCCCcCCCccc
Q 003257 530 ERCP-KRCSSHGQCRNAFDASGLTLYSFCACDR-DHGGFDCSVEL 572 (836)
Q Consensus 530 s~C~-~~Cg~~G~C~~l~~~sG~~~ys~C~C~~-Gy~GwdCtd~s 572 (836)
.+|. +.|.+.|+|.... + .| .|.|.. ||.|..|.++.
T Consensus 186 ~~C~~~pC~n~g~C~~~~--~-~~---~C~C~~~~~~G~~C~~~~ 224 (410)
T 3asi_A 186 TTCQEDSCSNQGVCLQQW--D-GF---SCDCSMTSFSGPLCNDPG 224 (410)
T ss_dssp SCCCTTSSSTTCEEEECS--S-SE---EEECTTTSEESTTSCEEC
T ss_pred CCcccccCCCCCEecCCC--C-Cc---eEeccCCcccCCCCCCCc
Confidence 4674 7899999998742 2 23 899996 99999998754
No 43
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=52.02 E-value=3 Score=38.51 Aligned_cols=37 Identities=24% Similarity=0.769 Sum_probs=0.0
Q ss_pred eccc-ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 529 LERC-PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 529 ls~C-~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
...| ++.|.+.|.|.... |+| .|.|.+||.|-.|.+.
T Consensus 42 ~d~C~~~pC~n~g~C~~~~---~~y---~C~C~~G~~G~~C~~~ 79 (134)
T 2vh0_B 42 GDQCETSPCQNQGKCKDGL---GEY---TCTCLEGFEGKNCELF 79 (134)
T ss_dssp --------------------------------------------
T ss_pred cCcCCCCCCCCcCCcccCC---CCE---EeeCCCCccCCccccC
Confidence 3456 36798889997642 333 7999999999999864
No 44
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=51.21 E-value=6.5 Score=46.27 Aligned_cols=32 Identities=31% Similarity=0.699 Sum_probs=27.1
Q ss_pred eccccc----CCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 529 LERCPK----RCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 529 ls~C~~----~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
...|+. .|++||.|.- | .|.|.+||.|..|..
T Consensus 557 ~~~C~~~~g~~Cs~~G~C~~-----g-----~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 557 TEGCLNPRRVECSGRGRCRC-----N-----VCECHSGYQLPLCQE 592 (687)
T ss_dssp SCTTBCTTCSBTSSSCCBCS-----S-----CBCCSTTCCTTTTCC
T ss_pred CCCCCCCCCCCCCCCCcCCC-----C-----EEECCCCCcCCCCCC
Confidence 467875 5999999974 3 799999999999975
No 45
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=50.45 E-value=2.9 Score=46.42 Aligned_cols=32 Identities=28% Similarity=0.779 Sum_probs=25.3
Q ss_pred ecccccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 529 LERCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 529 ls~C~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
...|...|. ||.|.. .+ .|.|.+||.|..|..
T Consensus 392 ~~~C~~~C~-nG~C~~----~~-----~C~C~~G~~G~~C~~ 423 (463)
T 2wg3_C 392 TSECSRLCR-NGYCTP----TG-----KCCCSPGWEGDFCRT 423 (463)
T ss_dssp CCHHHHHCC-SEEECT----TS-----CEEECTTEESTTSCE
T ss_pred cccccCCCC-CCccCC----CC-----eECCCCCcCCCcCCc
Confidence 356877897 599974 12 899999999999963
No 46
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=50.43 E-value=5.7 Score=36.37 Aligned_cols=55 Identities=25% Similarity=0.578 Sum_probs=35.2
Q ss_pred cCCcEEEEEEeeeCCCceEEEEEEecccc-cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 505 REGTWGFGIRHVNTSKSETVMSVSLERCP-KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 505 qtGtWYLsL~~~n~~~~~v~~sisls~C~-~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
..|.|.- ..|+..... -.-..+|. +.|..+|.|..- ...-.|+|.+||.|.-|-.
T Consensus 100 ~~~~W~d---~~C~~~~~f--ICe~~~~~~~pc~~~g~C~~~------~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 100 DVGMWND---ERCSKKKLA--LCYTAACTNTSCSGHGECVET------INNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp STTCEEE---ECTTSCBEE--EEEECCCCTTGGGGSEEEEEE------TTEEEEEECTTEESTTSCE
T ss_pred CCCcccc---CCCCCCcce--EeCcCCCCCCCCCCCCEeecC------CCCeeEECCCCccCccccc
Confidence 3677864 246543222 12224564 578788999873 2233899999999999953
No 47
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=50.43 E-value=8.2 Score=36.93 Aligned_cols=38 Identities=18% Similarity=0.332 Sum_probs=30.2
Q ss_pred ecccccCC-CCCceeeeeeccCCceEEeeeeeCCCCCCcCCCccc
Q 003257 529 LERCPKRC-SSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVEL 572 (836)
Q Consensus 529 ls~C~~~C-g~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~s 572 (836)
...|.+.| ..+|.|.... |.| .|.|.+||.|-.|....
T Consensus 139 ~~~C~~~C~~~~~~C~n~~---g~y---~C~C~~G~~g~~~~~~~ 177 (186)
T 1z1y_A 139 ETACQLXCNTDNEVCXNVE---GVY---XCQCMEGFTFDXEXNVC 177 (186)
T ss_dssp CCCCCCCCCTTTEEEEEET---TEE---EEEECTTCEEETTTTEE
T ss_pred CCcccccccccCcceecCC---CCe---eeECCCCCccCcccccC
Confidence 45788899 8899998742 434 79999999999997543
No 48
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=50.35 E-value=5.8 Score=37.84 Aligned_cols=30 Identities=37% Similarity=0.961 Sum_probs=23.0
Q ss_pred ccccCCC-CCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003257 531 RCPKRCS-SHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 569 (836)
Q Consensus 531 ~C~~~Cg-~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCt 569 (836)
.|.+.|+ .||.|.. ++ .|.|++||.|..|.
T Consensus 67 ~C~~~C~~~~g~C~~----~~-----~C~C~~G~~G~~C~ 97 (169)
T 2vj2_A 67 ICRQGCSPKHGSCKL----PG-----DCRCQYGWQGLYCD 97 (169)
T ss_dssp CCCTTCCTTTEECSS----TT-----CCEECTTEESSSSC
T ss_pred CCCCCCCCCCcccCC----CC-----eeECCCCCCCCCcc
Confidence 4777887 7888864 22 78888888888885
No 49
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=49.62 E-value=5.7 Score=46.68 Aligned_cols=31 Identities=45% Similarity=1.010 Sum_probs=25.8
Q ss_pred eccccc----CCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003257 529 LERCPK----RCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 569 (836)
Q Consensus 529 ls~C~~----~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCt 569 (836)
...|+. .|++||.|.- | .|.|.+||.|..|.
T Consensus 525 ~~~C~~~~~~~C~~~G~C~~-----g-----~C~C~~Gy~G~~Ce 559 (690)
T 3fcs_B 525 DFSCVRYKGEMCSGHGQCSC-----G-----DCLCDSDWTGYYCN 559 (690)
T ss_dssp SSCCCBSSSSBGGGSEEEET-----T-----EEEECTTEESSSSC
T ss_pred cCcCcCCCCCCCCCCCEecC-----C-----eeECcCCCcCCCCc
Confidence 457874 6999999964 3 89999999999997
No 50
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=48.72 E-value=6.2 Score=43.48 Aligned_cols=29 Identities=28% Similarity=0.737 Sum_probs=24.1
Q ss_pred CCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 535 RCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 535 ~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
.|.++|.|.. .+| .|.|++||.|..|.++
T Consensus 204 ~C~~~G~C~~---~~g-----~C~C~~G~~G~~Ce~~ 232 (423)
T 2gy5_A 204 ACMNNGVCHE---DTG-----ECICPPGFMGRTCEKA 232 (423)
T ss_dssp CCCTTCEECT---TTC-----CEECCTTEESTTSCEE
T ss_pred CCCCCCEEEC---CCC-----cEeCCCCccCCCcccc
Confidence 7889999985 233 8999999999999753
No 51
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=47.96 E-value=9.5 Score=42.70 Aligned_cols=17 Identities=18% Similarity=0.276 Sum_probs=14.8
Q ss_pred eeeeCCCCCCcCCCccc
Q 003257 556 FCACDRDHGGFDCSVEL 572 (836)
Q Consensus 556 ~C~C~~Gy~GwdCtd~s 572 (836)
.|+|..||.|..|....
T Consensus 398 ~C~Cy~gw~G~~C~~~~ 414 (424)
T 2pe4_A 398 KCRCYPGWQAPWCERKS 414 (424)
T ss_dssp EEEECTTBCTTTTCSBC
T ss_pred EeeccCCCCcccccCCC
Confidence 59999999999997643
No 52
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=43.25 E-value=12 Score=43.87 Aligned_cols=33 Identities=30% Similarity=0.743 Sum_probs=27.5
Q ss_pred Eecccc----cCCCCCceeeeeeccCCceEEeeeee-CCCCCCcCCCc
Q 003257 528 SLERCP----KRCSSHGQCRNAFDASGLTLYSFCAC-DRDHGGFDCSV 570 (836)
Q Consensus 528 sls~C~----~~Cg~~G~C~~l~~~sG~~~ys~C~C-~~Gy~GwdCtd 570 (836)
....|. +.|+++|.|.- | .|.| .+||.|..|..
T Consensus 563 ~~~~C~~~~g~~C~~~G~C~~-----g-----~C~C~~~Gy~G~~Ce~ 600 (690)
T 3fcs_B 563 RTDTCMSSNGLLCSGRGKCEC-----G-----SCVCIQPGSYGDTCEK 600 (690)
T ss_dssp CCTTTBCTTSSBTSSSCEEET-----T-----EEECCSTTCBSTTSCB
T ss_pred CCCcccCCCCCCCCCCCEEeC-----C-----EEECCCCCccCCCcCc
Confidence 456787 57999999952 4 8999 99999999975
No 53
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=42.01 E-value=8.7 Score=32.64 Aligned_cols=35 Identities=31% Similarity=0.673 Sum_probs=25.1
Q ss_pred ecccc---cCCCCCceeeeeeccCCceEEeeeeeCCCCC-----CcCCCc
Q 003257 529 LERCP---KRCSSHGQCRNAFDASGLTLYSFCACDRDHG-----GFDCSV 570 (836)
Q Consensus 529 ls~C~---~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~-----GwdCtd 570 (836)
...|. +.| .+|.|.-.. |.| .|.|.+||. |..|.|
T Consensus 3 ideC~~~~~~C-~~g~C~n~~---g~y---~C~C~~Gy~~~~~~g~~C~d 45 (86)
T 1lmj_A 3 IDECRISPDLC-GRGQCVNTP---GDF---ECKCDEGYESGFMMMKNCMD 45 (86)
T ss_dssp CCTTTTCSSTT-TTSCEEEET---TEE---EECCCSSEEECTTTSSSEEE
T ss_pred cccccCCCCCC-CCCEEECCC---CCE---EeeCCCCcCccCCCCCccCC
Confidence 35674 448 578998753 444 899999997 778864
No 54
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=42.00 E-value=7.5 Score=41.01 Aligned_cols=24 Identities=33% Similarity=0.812 Sum_probs=21.4
Q ss_pred CCCCceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003257 536 CSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCS 569 (836)
Q Consensus 536 Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCt 569 (836)
|++||.|.- | .|.|++||.|-.|.
T Consensus 198 C~g~G~~~C-----G-----~C~C~~g~~G~~Ce 221 (280)
T 2p26_A 198 CHGKGFLEC-----G-----ICRCDTGYIGKNCE 221 (280)
T ss_dssp GGGSEEEET-----T-----EEEECTTEESTTSC
T ss_pred cCCCCeECC-----C-----ceeCCCCCcCCcce
Confidence 889999884 5 89999999999996
No 55
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=38.60 E-value=15 Score=40.33 Aligned_cols=29 Identities=24% Similarity=0.541 Sum_probs=21.9
Q ss_pred cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 534 KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 534 ~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
+.|..+|.|.. .+| .|.|++||.|..|.+
T Consensus 250 ~~C~~~g~C~~---~~~-----~C~C~~G~~G~~C~~ 278 (423)
T 2gy5_A 250 EGCKSYVFCLP---DPY-----GCSCATGWKGLQCNE 278 (423)
T ss_dssp TTTTTCCEEET---TTT-----EEECCBTCBSGGGCB
T ss_pred CCCCCCCEECC---CCC-----eEEeCCCcccccccC
Confidence 55777777742 222 899999999999976
No 56
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=38.23 E-value=24 Score=32.23 Aligned_cols=37 Identities=22% Similarity=0.467 Sum_probs=28.4
Q ss_pred Eecccc---cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCc
Q 003257 528 SLERCP---KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSV 570 (836)
Q Consensus 528 sls~C~---~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd 570 (836)
....|. +.|..+|.|.-. .|.| .|.|.+||.|..+..
T Consensus 95 dideC~~~~~~C~~~~~C~n~---~g~y---~C~C~~Gy~g~~~~~ 134 (143)
T 2bou_A 95 DVDECSSGQHQCDSSTVCFNT---VGSY---SCRCRPGWKPRHGIP 134 (143)
T ss_dssp ECCHHHHTCCCCCTTSEEEEC---SSCE---EEECCSSSCBCTTCC
T ss_pred CccCccCcCCCCCCCCEEECC---CCCE---EeeCCCCcccCCCCc
Confidence 346675 689999999864 2445 799999999988754
No 57
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=37.72 E-value=17 Score=44.81 Aligned_cols=36 Identities=28% Similarity=0.692 Sum_probs=28.0
Q ss_pred cc-ccCCCCCceeeeeeccCCceEEeeeeeC-CCCCCcCCCccc
Q 003257 531 RC-PKRCSSHGQCRNAFDASGLTLYSFCACD-RDHGGFDCSVEL 572 (836)
Q Consensus 531 ~C-~~~Cg~~G~C~~l~~~sG~~~ys~C~C~-~Gy~GwdCtd~s 572 (836)
+| ++.|.+.|.|.... ++ | .|.|. .||.|..|.++.
T Consensus 1019 ~C~~~pC~ngG~C~~~~--~~-~---~C~C~~~g~~G~~C~~~~ 1056 (1245)
T 3qcw_A 1019 TCQEDSCSNQGVCLQQW--DG-F---SCDCSMTSFSGPLCNDPG 1056 (1245)
T ss_dssp CCCTTSSSSSCEEEEET--TE-E---EEECTTSSCBSTTSCBCC
T ss_pred ceECCcCCCCCEeCCCC--CC-C---EEECCCCCCCCCCccCCC
Confidence 45 36899999999753 22 3 89999 599999998764
No 58
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=37.28 E-value=11 Score=44.42 Aligned_cols=31 Identities=29% Similarity=0.774 Sum_probs=26.2
Q ss_pred eccccc----CCCC--CceeeeeeccCCceEEeeeeeCCCCCCcCCC
Q 003257 529 LERCPK----RCSS--HGQCRNAFDASGLTLYSFCACDRDHGGFDCS 569 (836)
Q Consensus 529 ls~C~~----~Cg~--~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCt 569 (836)
...|+. .|++ ||.|.- | .|.|.+||.|..|.
T Consensus 516 ~~~C~~~~~~~C~~~~~G~C~~-----g-----~C~C~~G~~G~~Ce 552 (687)
T 3k6s_B 516 TINCERYNGQVCGGPGRGLCFC-----G-----KCRCHPGFEGSACQ 552 (687)
T ss_dssp SSCSCEETTEETSHHHHEEEET-----T-----EEEECTTCCSTTSC
T ss_pred cccccCCCCcCcCCCCCCeEEC-----C-----EEEcCCCCcCCCCc
Confidence 467874 4999 999983 4 89999999999997
No 59
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=31.65 E-value=22 Score=33.25 Aligned_cols=35 Identities=31% Similarity=0.803 Sum_probs=26.2
Q ss_pred eccc--ccCCCCCceeeeeeccCCceEEeeeeeCCCCC----CcCCCc
Q 003257 529 LERC--PKRCSSHGQCRNAFDASGLTLYSFCACDRDHG----GFDCSV 570 (836)
Q Consensus 529 ls~C--~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~----GwdCtd 570 (836)
+..| ++.|. +|.|.-.. |.| .|.|.+||. |-.|.|
T Consensus 3 ideC~~~~~C~-~~~C~n~~---gsy---~C~C~~Gy~~~~~g~~C~d 43 (162)
T 1uzk_A 3 VNECLDPTTCI-SGNCVNTP---GSY---ICDCPPDFELNPTRVGCVD 43 (162)
T ss_dssp CCGGGSTTSSB-TSEEEEET---TEE---EEECCTTCEECTTSSBEEC
T ss_pred cccCCCCCCCC-CCEeECCC---CCE---EEeCCCCCeECCCCCcccC
Confidence 3556 36785 79998653 445 899999998 888874
No 60
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=30.07 E-value=28 Score=33.22 Aligned_cols=37 Identities=27% Similarity=0.791 Sum_probs=26.2
Q ss_pred cccccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 530 ERCPKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 530 s~C~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
+.| .|-+.|.|......++ +..|.|.+||.|..|..+
T Consensus 11 ~~c--pC~NGGtC~~~~~~s~---~~~C~Cp~g~~G~~Cei~ 47 (145)
T 2i9a_A 11 SNC--DCLNGGTCVSNKYFSN---IHWCNCPKKFGGQHCEID 47 (145)
T ss_dssp -CC--CCCTTCEEEECSSSTT---CEEEECCTTEESTTSCEE
T ss_pred CCC--CCCCCCCcCCCccccC---CccccCCCCCCCCceecc
Confidence 566 5888999976422222 347999999999999654
No 61
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=28.68 E-value=14 Score=31.45 Aligned_cols=34 Identities=26% Similarity=0.611 Sum_probs=24.0
Q ss_pred cccc-c--CCCCCceeeeeeccCCceEEeeeeeCCCCC----CcCCCc
Q 003257 530 ERCP-K--RCSSHGQCRNAFDASGLTLYSFCACDRDHG----GFDCSV 570 (836)
Q Consensus 530 s~C~-~--~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~----GwdCtd 570 (836)
..|. + .| .+|.|.-.. |.| .|.|.+||. |..|.|
T Consensus 4 deC~~~~~~C-~~~~C~n~~---g~y---~C~C~~G~~~~~~g~~C~d 44 (87)
T 1z6c_A 4 DECSLKPSIC-GTAVCKNIP---GDF---ECECPEGYRYNLKSKSCED 44 (87)
T ss_dssp CSSSSSSSSB-TTSSCCCBT---TBC---CCSSSTTCEEETTTTEEEC
T ss_pred ccccCCCCCC-CCCEeECCC---CCE---EEECCCCceECCCCCcCCC
Confidence 4563 2 38 788997643 434 799999999 788854
No 62
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=28.27 E-value=15 Score=30.99 Aligned_cols=35 Identities=34% Similarity=0.732 Sum_probs=24.9
Q ss_pred ecccc--cCCCCCceeeeeeccCCceEEeeeeeCCCCC--CcCCCc
Q 003257 529 LERCP--KRCSSHGQCRNAFDASGLTLYSFCACDRDHG--GFDCSV 570 (836)
Q Consensus 529 ls~C~--~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~--GwdCtd 570 (836)
...|. +.|. ||.|.... |.| .|.|.+||. |..|.|
T Consensus 5 ideC~~~~~C~-~g~C~n~~---g~y---~C~C~~Gy~~~g~~C~d 43 (82)
T 1emn_A 5 MDECKEPDVCK-HGQCINTD---GSY---RCECPFGYILAGNECVD 43 (82)
T ss_dssp CCSSSSTTSCS-SSEECCCS---SCC---CEECCTTEEEETTEEEE
T ss_pred cccCCCCCCcC-CCEEEecC---CCE---EEECCCCeECCCCccCC
Confidence 34563 6784 69998642 434 799999997 888854
No 63
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=26.36 E-value=49 Score=27.80 Aligned_cols=32 Identities=25% Similarity=0.676 Sum_probs=23.2
Q ss_pred eccc--ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcC
Q 003257 529 LERC--PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFD 567 (836)
Q Consensus 529 ls~C--~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~Gwd 567 (836)
...| .+.|. +|.|.-.. |.| .|.|.+||.|-.
T Consensus 44 ideC~~~~~C~-~~~C~n~~---g~y---~C~C~~G~~g~~ 77 (82)
T 1emn_A 44 TDECSVGNPCG-NGTCKNVI---GGF---ECTCEEGFEPGP 77 (82)
T ss_dssp CCGGGTCCTTS-SSCEEECS---SSE---EECCSSSSCCCS
T ss_pred cccccCCCCCC-CCEeECCC---CCE---EeECCCCeEeCC
Confidence 4567 36785 58998753 445 799999999854
No 64
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=26.18 E-value=22 Score=32.68 Aligned_cols=33 Identities=24% Similarity=0.660 Sum_probs=23.6
Q ss_pred ecccc-cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCC
Q 003257 529 LERCP-KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDC 568 (836)
Q Consensus 529 ls~C~-~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdC 568 (836)
...|. +.|. ||.|.-.. |.| .|.|.+||.|-.|
T Consensus 4 ideC~~~pC~-ng~C~n~~---g~y---~C~C~~G~~g~~~ 37 (147)
T 2w86_A 4 IDECESSPCI-NGVCKNSP---GSF---ICECSSESTLDPT 37 (147)
T ss_dssp CCGGGGCCSB-TSEEEEET---TEE---EEECCTTEEECTT
T ss_pred CccCcCCCCC-CCEeECCC---CCE---EeECCCCcccCCC
Confidence 35563 6785 69998652 444 8999999998654
No 65
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=26.01 E-value=27 Score=43.17 Aligned_cols=36 Identities=28% Similarity=0.782 Sum_probs=27.8
Q ss_pred ccc-ccCCCCCceeeeeeccCCceEEeeeeeC-CCCCCcCCCcc
Q 003257 530 ERC-PKRCSSHGQCRNAFDASGLTLYSFCACD-RDHGGFDCSVE 571 (836)
Q Consensus 530 s~C-~~~Cg~~G~C~~l~~~sG~~~ys~C~C~-~Gy~GwdCtd~ 571 (836)
.+| ++.|.++|.|.... + .| .|.|. .||.|..|..+
T Consensus 620 ~~C~~~pC~ngg~C~~~~--~-~~---~C~C~~~g~~G~~C~~~ 657 (1245)
T 3qcw_A 620 KPCLSNPCKNNGMCRDGW--N-RY---VCDCSGTGYLGRSCERE 657 (1245)
T ss_dssp CGGGSCCCCTTCEEEECS--S-SE---EEECTTTTEESTTSCEE
T ss_pred CCCCccCCCCCCEEeCCC--C-Ce---EEECCCCCcccccCccc
Confidence 456 37899999999742 2 23 89999 79999999764
No 66
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=25.60 E-value=23 Score=33.85 Aligned_cols=38 Identities=21% Similarity=0.517 Sum_probs=27.3
Q ss_pred ecccc-----cCCCCCceeeeeecc--CCceEEeeeeeCCCCCCcCCC
Q 003257 529 LERCP-----KRCSSHGQCRNAFDA--SGLTLYSFCACDRDHGGFDCS 569 (836)
Q Consensus 529 ls~C~-----~~Cg~~G~C~~l~~~--sG~~~ys~C~C~~Gy~GwdCt 569 (836)
...|. +.|.++|.|...... .|.| .|.|.+||.|-.|.
T Consensus 44 id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y---~C~C~~G~~g~~~~ 88 (186)
T 1z1y_A 44 XNECXXETLGXACGEFGQCIENPDPAQVNMY---XCGCIEGYTLXEDT 88 (186)
T ss_dssp CCCCSGGGTTSEEETTEEEEECSSTTSSCSE---EEEECTTEEEETTE
T ss_pred CCcccCCCCCCCCCCCCEeecCCCCcCCCCE---ECCCCCCCccCCCC
Confidence 47785 569999999875310 0334 79999999998663
No 67
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=24.55 E-value=43 Score=30.72 Aligned_cols=34 Identities=26% Similarity=0.587 Sum_probs=24.7
Q ss_pred Eeccc---ccCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCC
Q 003257 528 SLERC---PKRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDC 568 (836)
Q Consensus 528 sls~C---~~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdC 568 (836)
....| |+.|. +|.|.-.. |.| .|.|.+||.|-..
T Consensus 106 dideC~~~~~~C~-~g~C~n~~---g~y---~C~C~~Gy~g~~~ 142 (147)
T 2w86_A 106 DIDECEVFPGVCK-NGLCVNTR---GSF---KCQCPSGMTLDAT 142 (147)
T ss_dssp ECCHHHHSTTCSS-SSEEEEET---TEE---EEECCTTCCBCTT
T ss_pred ccccccCCCCCCC-CCEEECCC---CCE---EeeCCCCCccCCC
Confidence 35667 35596 68998753 445 8999999998654
No 68
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=24.52 E-value=40 Score=25.71 Aligned_cols=23 Identities=30% Similarity=0.680 Sum_probs=16.5
Q ss_pred CCCCCceeeeeeccCCceEEeeeeeCCCCCC
Q 003257 535 RCSSHGQCRNAFDASGLTLYSFCACDRDHGG 565 (836)
Q Consensus 535 ~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~G 565 (836)
.|. +.|.-.. |.| .|.|.+||.|
T Consensus 21 ~C~--~~C~n~~---Gsy---~C~C~~Gy~~ 43 (53)
T 1apq_A 21 QCQ--HLCHNYV---GGY---FCSCRPGYEL 43 (53)
T ss_dssp TTS--SEEEEET---TEE---EEECSTTCEE
T ss_pred CCC--CEeECCC---CCe---EEECCCCCeE
Confidence 474 4887642 545 7999999985
No 69
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=23.45 E-value=44 Score=39.06 Aligned_cols=37 Identities=27% Similarity=0.502 Sum_probs=27.4
Q ss_pred ecccc-cCCCCCceeeeeeccCCceEEeee-eeCCCCCC--cCCCc
Q 003257 529 LERCP-KRCSSHGQCRNAFDASGLTLYSFC-ACDRDHGG--FDCSV 570 (836)
Q Consensus 529 ls~C~-~~Cg~~G~C~~l~~~sG~~~ys~C-~C~~Gy~G--wdCtd 570 (836)
...|. +.|.++|+|..... |.| .| .|.+||.| -.|.+
T Consensus 3 IDeC~~nPC~~gg~C~n~~~--Gsy---~C~~C~~GytGdg~~CeD 43 (634)
T 1yo8_A 3 PDGCLSNPCFPGAQCSSFPD--GSW---SCGFCPVGFLGNGTHCED 43 (634)
T ss_dssp -CGGGGCCSCTTCCEEECTT--SCE---EECCCCTTBCSCSSSCCB
T ss_pred ccccCCCCCCCCCEEecCCC--CCe---ECCcCCCccCCCCCCccc
Confidence 35674 78999999997531 213 79 99999999 78874
No 70
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=22.37 E-value=60 Score=29.81 Aligned_cols=36 Identities=31% Similarity=0.674 Sum_probs=24.3
Q ss_pred EEeccccc----CCCCCceeeeeeccCCceEEeeeeeCCCCC----CcCCCc
Q 003257 527 VSLERCPK----RCSSHGQCRNAFDASGLTLYSFCACDRDHG----GFDCSV 570 (836)
Q Consensus 527 isls~C~~----~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~----GwdCtd 570 (836)
+....|.. .|+ +.|.-. .|.+ .|.|.+||. |-.|.+
T Consensus 115 ~d~~eC~~~~~~~C~--~~C~n~---~g~~---~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 115 TDINECTDFVDVPCS--HFCNNF---IGGY---FCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp EECCTTTC-CCCCSS--SEEEEE---TTEE---EEECCTTCEECTTSSCEEC
T ss_pred ccCcccCCCCCCCCC--CcccCc---CCCE---EEecCCCcEECCCCCcccc
Confidence 34567863 574 368754 3433 999999998 777765
No 71
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=21.81 E-value=45 Score=31.11 Aligned_cols=34 Identities=26% Similarity=0.593 Sum_probs=24.7
Q ss_pred Eecccc---cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcCC
Q 003257 528 SLERCP---KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDC 568 (836)
Q Consensus 528 sls~C~---~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdC 568 (836)
....|. +.|. ||.|.-.. |.| .|.|.+||.|-..
T Consensus 121 dideC~~~~~~C~-~g~C~n~~---gsy---~C~C~~Gy~g~~d 157 (162)
T 1uzk_A 121 DIDECQELPGLCQ-GGKCINTF---GSF---QCRCPTGYYLNED 157 (162)
T ss_dssp ECCHHHHCGGGGB-TSEEEECS---SCE---EEECCTTCCBCTT
T ss_pred ccccccCCCCCcC-CCEeEcCC---CCE---EeeCCCCccCCCC
Confidence 456674 4685 68998753 445 8999999999654
No 72
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=21.80 E-value=55 Score=27.58 Aligned_cols=32 Identities=28% Similarity=0.610 Sum_probs=22.6
Q ss_pred ecccc---cCCCCCceeeeeeccCCceEEeeeeeCCCCCCcC
Q 003257 529 LERCP---KRCSSHGQCRNAFDASGLTLYSFCACDRDHGGFD 567 (836)
Q Consensus 529 ls~C~---~~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~Gwd 567 (836)
...|. ..|. +|.|.-.. |.| .|.|.+||.|-.
T Consensus 46 ideC~~~~~~C~-~~~C~n~~---g~y---~C~C~~G~~~~~ 80 (86)
T 1lmj_A 46 IDECQRDPLLCR-GGVCHNTE---GSY---RCECPPGHQLSP 80 (86)
T ss_dssp CCHHHHCSSTTT-TSEEEEET---TEE---EEESCTTSCCCS
T ss_pred cccccCCCCcCC-CCEeEcCC---CCE---EEECcCCcccCC
Confidence 45674 2374 68998753 445 899999999854
No 73
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=21.47 E-value=47 Score=30.50 Aligned_cols=34 Identities=26% Similarity=0.743 Sum_probs=24.0
Q ss_pred CCCCCceeeeeeccCCceEEeeeeeCCCCCCcCCCcc
Q 003257 535 RCSSHGQCRNAFDASGLTLYSFCACDRDHGGFDCSVE 571 (836)
Q Consensus 535 ~Cg~~G~C~~l~~~sG~~~ys~C~C~~Gy~GwdCtd~ 571 (836)
.|-+.|.|......++ +..|.|..||.|..|..+
T Consensus 2 pC~nggtC~~~~~~~~---~~~C~Cp~g~~G~~Ce~~ 35 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSN---IHWCNCPKKFGGQHCEID 35 (122)
T ss_dssp CCCSSCEEEECTTTTT---CEEEECCTTEESTTSCEE
T ss_pred CCCCcCCcCCCcccCC---CCCccCCCCCCCcccccc
Confidence 4777889975321122 347999999999999754
Done!