BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003258
(835 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224079239|ref|XP_002305805.1| predicted protein [Populus trichocarpa]
gi|222848769|gb|EEE86316.1| predicted protein [Populus trichocarpa]
Length = 908
Score = 1132 bits (2929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 566/844 (67%), Positives = 683/844 (80%), Gaps = 16/844 (1%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG ++ + A+IP GKS EESQKLL+QT+AALA+M+S PLD S IEDI IL+SAVSG LL
Sbjct: 72 MGQSITRNAKIPIGKSKEESQKLLDQTAAALAVMESGPLDFSGIEDITRILDSAVSGTLL 131
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
+ E+CAVRRTLRA V ++L ++ GD +RY+PLLE+L+NC+F ELE+K+GFCI
Sbjct: 132 TVGELCAVRRTLRAARAVLERLKDS----GDCSERYAPLLEILQNCSFQIELEKKVGFCI 187
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
DC L ILDRASEDLE+IR+ERKRNMENLD LLK ++A+IFQAGGIDKPL+TKRRSR+CV
Sbjct: 188 DCNLSKILDRASEDLEIIRSERKRNMENLDRLLKGISARIFQAGGIDKPLVTKRRSRLCV 247
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
G++ASH+YL+PDG+ LNVSSSG TYFMEP AVE NN+EV LS+SE AEE AILSLLT+E
Sbjct: 248 GVRASHRYLIPDGVVLNVSSSGVTYFMEPGEAVELNNLEVMLSDSEKAEEIAILSLLTSE 307
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS-------FDSSINIE 293
IA+S R+IKY++D ++E+DL+FARA +A WM+GV PI +S+ + SI+IE
Sbjct: 308 IAESARDIKYMLDGIIEVDLSFARAAYAYWMNGVRPIWTSEGCGGISSSGGDYLLSIDIE 367
Query: 294 GIKHPLLLGSSLRSLS--AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
GI+HPLL G+S + LS S++ N ++ D E+S + G SK +S+FPVPI+IKVEC T
Sbjct: 368 GIRHPLLNGTSRKRLSNILGSNSLNSMEVD-EDSMLDTGKPSKNVSEFPVPINIKVECGT 426
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
RVVVI+GPNTGGKTASMKTLG+ASLMSKAGLYLPAKN P+LPWFD +LADIGDHQSLEQN
Sbjct: 427 RVVVISGPNTGGKTASMKTLGVASLMSKAGLYLPAKNTPKLPWFDFVLADIGDHQSLEQN 486
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LSTFSGHISRI ILE+ S ESLVL+DEI SGTDPSEGVAL+TSIL YLRD V LAVVTT
Sbjct: 487 LSTFSGHISRICKILEVASNESLVLVDEICSGTDPSEGVALSTSILHYLRDHVNLAVVTT 546
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HYADLS LKDKD+RFENAA EFSLETL+PTY+ILWG TGDSNAL+IAKSIGFD II+RA
Sbjct: 547 HYADLSLLKDKDSRFENAAMEFSLETLQPTYQILWGCTGDSNALSIAKSIGFDSNIIERA 606
Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
+K VE+L PE+QQ R LYQSL+EER +LE+QAR ASLH EIM+LY EI+ E++DLD
Sbjct: 607 RKWVEKLVPEKQQERSGMLYQSLLEERNRLEAQARKGASLHTEIMELYHEIQAESEDLDG 666
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA 651
R L AKETQ VQ EL A QI+TVVQ+ E QLR AS D+ NSLIK+SESAIA+IVEA
Sbjct: 667 RVKALMAKETQLVQLELKAANSQIETVVQNVETQLRKASPDQFNSLIKKSESAIASIVEA 726
Query: 652 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
H D SET+TSS+TPQ GEQV VK LG+KLATVVE P DD+TVLVQYGK+RVR+KK
Sbjct: 727 HCSSDSLPASETDTSSYTPQLGEQVLVKRLGNKLATVVEAPRDDETVLVQYGKIRVRMKK 786
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
++IR I + K+ A P L++Q +QS S + +EE S+GPRVQTSKN++DLRGMRV
Sbjct: 787 SDIRAIKSDKKSKATILVPSLKRQV--KQSFSELNKDEEVSHGPRVQTSKNTVDLRGMRV 844
Query: 772 EEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTV 831
EEA+ L++A++ E SV+FV+HGMGTG VKE LE+L HPRVAKYE ESPMN+GCTV
Sbjct: 845 EEAAQHLNMAISAREPLSVIFVVHGMGTGAVKEGALEVLGKHPRVAKYEPESPMNFGCTV 904
Query: 832 AYIK 835
AYIK
Sbjct: 905 AYIK 908
>gi|255556027|ref|XP_002519048.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
gi|223541711|gb|EEF43259.1| DNA mismatch repair protein muts2, putative [Ricinus communis]
Length = 873
Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/841 (65%), Positives = 663/841 (78%), Gaps = 46/841 (5%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MGH+ + A IP G+S++ES+ LL+QT+AALAMMQ LD S IEDI GI+NSAVSG LL
Sbjct: 71 MGHSAARSASIPIGESIQESRMLLDQTTAALAMMQYGTLDFSAIEDITGIVNSAVSGNLL 130
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
+ SE+CAVRRTL A V ++L + GD L+R PLLE+ ++CN +LE+KIGFCI
Sbjct: 131 TVSELCAVRRTLEAAKAVLERLKDG----GDCLERSYPLLEIFRSCNLQIQLEQKIGFCI 186
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
DC LLIILDRASEDLELIR ERK+ MENLD+LLK ++ +IFQAGGID+P +TKRRSR+CV
Sbjct: 187 DCNLLIILDRASEDLELIRYERKKTMENLDNLLKGISTRIFQAGGIDRPFVTKRRSRLCV 246
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
G++A+H+YL+PDG+ L+VS SGATYF+EP AVE NN+EV LSNSE AEE AILSLLT+E
Sbjct: 247 GVRATHRYLIPDGVILDVSGSGATYFVEPGDAVELNNLEVMLSNSERAEEIAILSLLTSE 306
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ-------SHVSFDSSINIE 293
IA+SER+IK L+D +LE+DLAFARA +A+ ++GVCP +S+ S ++ SI+IE
Sbjct: 307 IAESERDIKKLLDGILEVDLAFARAAYARQINGVCPTFTSEGYEGEPSSRANYALSIDIE 366
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
GI+HPLLLGSS + FPVPI+IKVEC TRV
Sbjct: 367 GIQHPLLLGSSQQK-------------------------------FPVPINIKVECGTRV 395
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
VVI+GPNTGGKTASMKTLG+ASLMSKAGL+LPA+N P++PWFD++LADIGD+QSLEQNLS
Sbjct: 396 VVISGPNTGGKTASMKTLGIASLMSKAGLFLPARNTPKIPWFDVVLADIGDNQSLEQNLS 455
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFSGHISRI ILE+ S+ESLVLIDEI SGTDPSEGVAL+TSILQYLRDRV LAVVTTHY
Sbjct: 456 TFSGHISRICKILEVTSKESLVLIDEICSGTDPSEGVALSTSILQYLRDRVNLAVVTTHY 515
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
ADLS LKD D++FENAA EFSLETL+PTY+ILWGSTG+SNAL+IAKSIGFD II+RA+K
Sbjct: 516 ADLSLLKDSDSQFENAAMEFSLETLQPTYQILWGSTGNSNALSIAKSIGFDSNIIERAEK 575
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
VE+L PE+QQHRK LY+SLM+ER KLE+QAR AAS+HA+IM+LY EI+DEA +LD R
Sbjct: 576 WVEKLIPEKQQHRKGLLYKSLMDERNKLEAQAREAASVHAQIMELYYEIQDEAGNLDSRI 635
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
L AKETQQVQQEL K QI+TVV +FEN LR AS + NSLI++SESAIA+IVEAH
Sbjct: 636 MALMAKETQQVQQELKATKSQIETVVHNFENLLRKASPLQFNSLIRKSESAIASIVEAHY 695
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
P D+ SE + SS+TPQ GEQVH+K G+K+ATVVE PG D+T+LVQYGK+RVRVKK++
Sbjct: 696 PADNLPASE-DVSSYTPQLGEQVHLKGFGNKVATVVEAPGKDETILVQYGKIRVRVKKSD 754
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
IR I KR A PRL++Q Q A + +E SYGPRVQTSKN++DLRGMRVEE
Sbjct: 755 IRAIQGKKRTEATKLVPRLKRQG---QQSHAEVNKDEDSYGPRVQTSKNTVDLRGMRVEE 811
Query: 774 ASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAY 833
A L++A++ E SV+FV+HGMGTG VK+R LEIL HPRV YE ESPMN+GCTVAY
Sbjct: 812 AVLHLNMAISEREPHSVIFVVHGMGTGAVKQRALEILGKHPRVTNYEAESPMNFGCTVAY 871
Query: 834 I 834
I
Sbjct: 872 I 872
>gi|356521349|ref|XP_003529319.1| PREDICTED: mutS2 protein-like isoform 1 [Glycine max]
Length = 914
Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/858 (62%), Positives = 664/858 (77%), Gaps = 27/858 (3%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG A A++P G++ +SQ+LL+QTSAA + ++PLD S + D+ IL A SG LL
Sbjct: 61 MGSAAALNARLPIGRTRRDSQRLLDQTSAA--RLVAEPLDFSGVHDLTEILGVATSGHLL 118
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
+ E+C VR TL A ++ L A + QRY PLL++L+NCNF LE KI FCI
Sbjct: 119 TIRELCTVRHTLAAARELFDALKRVASA-SNHPQRYLPLLDILQNCNFQVGLERKIEFCI 177
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
DCKL IILDRASEDLE+IR+ERKRN+E LDSLLK+V++QIFQAGGID+PLI KRRSRMCV
Sbjct: 178 DCKLSIILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCV 237
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
GI+ASH+YLLPDG+ LNVSSSGATYFMEPK A++ NN+EVRLS+SE AEE+ ILS+L +E
Sbjct: 238 GIRASHRYLLPDGVVLNVSSSGATYFMEPKDAIDLNNLEVRLSSSEKAEESVILSMLASE 297
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS------------ 288
IA SE +I +L+D++L++DLAFARA +AQWM+GVCPI S + DS
Sbjct: 298 IANSESDINHLLDKILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQE 357
Query: 289 ----SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS--LSKGISDFPVP 342
+++I GI+HPLLL SSL ++S + + ++ N T+ S + +GISDFPVP
Sbjct: 358 DDDLTVDIVGIRHPLLLESSLENISDNLTLRSGNAAEFGNGNGTMASKYMPQGISDFPVP 417
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
+D K+ TRVVVI+GPNTGGKTASMKTLGLASLMSKAG++LPAK +P+LPWFDLILADI
Sbjct: 418 VDFKIGHGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKNPKLPWFDLILADI 477
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GDHQSLEQNLSTFSGHISRI ILE+ S +SLVLIDEIG GTDPSEGVAL+ SILQYL+D
Sbjct: 478 GDHQSLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQYLKD 537
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
RV LAVVTTHYADLS +K+KDTRF+NAA EFSLETL+PTYRILWG TGDSNAL+IA+SIG
Sbjct: 538 RVNLAVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTYRILWGCTGDSNALSIAQSIG 597
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
FDR II RAQK VE+ +PE+QQ R+ LYQSL EER +L++QA AAS+HAEIM +Y EI
Sbjct: 598 FDRNIIDRAQKWVEKFKPEQQQERRGMLYQSLQEERNQLKAQAEKAASVHAEIMSVYNEI 657
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
+ EA+DLD+R L AKETQQVQ EL AK QI+TV+Q FE QLR + D++N LI+ESE
Sbjct: 658 QGEAEDLDQREMELMAKETQQVQHELEHAKSQIETVIQKFEKQLRISGRDQLNYLIRESE 717
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
SAIA+IV+AH P D F ++E + + +TPQ GEQVHVK LG KLATVVE PGDD T++VQY
Sbjct: 718 SAIASIVKAHTPADSFPINEADRALYTPQIGEQVHVKGLGGKLATVVESPGDDGTIMVQY 777
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA-----GSSNEEASYGPRV 757
GK++VRVKK+NI IP+S RKNA + + ++ ++G +N++ SYGP V
Sbjct: 778 GKVKVRVKKSNIIAIPSS-RKNAVTSSSSTHQGRQSLRNGEYRDNVDNKTNDDISYGPVV 836
Query: 758 QTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 817
+TSKN++DLRGMRVEEAS QL++A+ SVLFVIHGMGTG VKER L+IL+NHPRV
Sbjct: 837 RTSKNTVDLRGMRVEEASIQLEMAINASRPYSVLFVIHGMGTGAVKERALQILQNHPRVT 896
Query: 818 KYEQESPMNYGCTVAYIK 835
+E ESPMNYG T+AY+K
Sbjct: 897 NFEPESPMNYGSTIAYVK 914
>gi|358346679|ref|XP_003637393.1| MutS2 family protein [Medicago truncatula]
gi|355503328|gb|AES84531.1| MutS2 family protein [Medicago truncatula]
Length = 913
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/859 (61%), Positives = 662/859 (77%), Gaps = 28/859 (3%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG + A++P G + SQKLL+QTSAA + Q Q LD S I D+ IL+ +VSG+LL
Sbjct: 59 MGSSAANNARLPVGLTPHHSQKLLDQTSAARLVPQQQ-LDFSGIHDLTDILSVSVSGKLL 117
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
+ E+C VRRTL + ++ L A + S RYSPLLE+L+NCNFL LE +I FCI
Sbjct: 118 TVPELCTVRRTLSSARELFDTLRHLASVSNHS-HRYSPLLEILQNCNFLMGLERRIEFCI 176
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
DC LL+ILDRASEDLE+IR+ERKRN+E LDSLLK+V++QIF+AGGID+P ITKRRSRMCV
Sbjct: 177 DCNLLVILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFRAGGIDRPFITKRRSRMCV 236
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
GI+AS++YLLP+GI LN SSSGATYFMEPK A++ NNMEVRLSNSE AEE AILS+L +E
Sbjct: 237 GIRASYRYLLPEGIVLNASSSGATYFMEPKEAIDLNNMEVRLSNSEAAEERAILSMLASE 296
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----------SQSHVSF--- 286
IA S+ EI YL+D++LE+DLAFARA +AQWM+GVCPI S + +S
Sbjct: 297 IANSKSEINYLLDKILEVDLAFARAAYAQWMNGVCPIFSLGTLEVCESVEKDNDISVVQD 356
Query: 287 -DSSINIEGIKHPLLLGSSLRSLS----AASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
D ++NIEG++HPLLL SSL ++S S N+ L + N M S S+GI+DFPV
Sbjct: 357 DDLTVNIEGMRHPLLLESSLENISDNVTLRSGNAAELGNG--NGTMASKSASQGITDFPV 414
Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
P+D K+ TRVVVI+GPNTGGKTASMKTLGLASLMSKAG++LPAK P+LPWFDLIL D
Sbjct: 415 PVDFKIRSGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKSPKLPWFDLILVD 474
Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
IGDHQSLEQNLSTFSGHISRI LE+ S++SLVLIDEIGSGTDPSEGVAL+ SILQYLR
Sbjct: 475 IGDHQSLEQNLSTFSGHISRIRKFLEVASKQSLVLIDEIGSGTDPSEGVALSASILQYLR 534
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
+ V LAVVTTHYADLS +K+KDT FENAA EFSLETL+PTYR+LWG TGDSNAL+IA+SI
Sbjct: 535 EHVNLAVVTTHYADLSTMKEKDTCFENAAMEFSLETLQPTYRVLWGCTGDSNALSIAQSI 594
Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
GFD+ II AQK VE+L+PE+QQ R+ LYQSL EE+ +L++QA AAS+HAEIM++Y E
Sbjct: 595 GFDKNIIDHAQKWVEKLKPEQQQERRGMLYQSLQEEKNRLKAQAEKAASIHAEIMNVYSE 654
Query: 582 IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES 641
I+ EA+DLDRR L AKE QQVQQEL AK Q++ V+Q FE QL+D +++NS+IKES
Sbjct: 655 IQGEAEDLDRRETMLMAKEAQQVQQELEDAKSQMEIVIQKFEKQLKDLGRNQLNSIIKES 714
Query: 642 ESAIAAIVEAHRPDDDFSVSETN-TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
E+AIA+IV+AH P F +++ + T+S+TPQFGEQV VK LG KLATVVE+ GDD+T+LV
Sbjct: 715 ETAIASIVKAHTPAVGFPINDADRTTSYTPQFGEQVRVKGLGGKLATVVELLGDDETILV 774
Query: 701 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ----EDRQSGSAGSSNEEASYGPR 756
QYGK++VRVKKN IR IP S + + A +Q+ + R + N+++ YGP
Sbjct: 775 QYGKVKVRVKKNRIRAIPPSAKNPVTSSATHQGRQKPLNGKSRGNLEMNGGNDDSYYGPV 834
Query: 757 VQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
VQTSKN++DLRGMR+EEA+ L++A+ + SVLFVIHGMGTG VK+R L IL+ HPRV
Sbjct: 835 VQTSKNTVDLRGMRLEEAAIHLEMAINASQPYSVLFVIHGMGTGAVKDRALAILQKHPRV 894
Query: 817 AKYEQESPMNYGCTVAYIK 835
+E ESPMNYGCT+A +K
Sbjct: 895 THFEPESPMNYGCTIARVK 913
>gi|356521351|ref|XP_003529320.1| PREDICTED: mutS2 protein-like isoform 2 [Glycine max]
Length = 902
Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/853 (62%), Positives = 653/853 (76%), Gaps = 29/853 (3%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG A A++P G++ +SQ+LL+QTSAA + ++PLD S + D+ IL A SG LL
Sbjct: 61 MGSAAALNARLPIGRTRRDSQRLLDQTSAA--RLVAEPLDFSGVHDLTEILGVATSGHLL 118
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
+ E+C VR TL A ++ L A QRY PLL++L+NCNF LE KI FCI
Sbjct: 119 TIRELCTVRHTLAAARELFDALKRVASASNHP-QRYLPLLDILQNCNFQVGLERKIEFCI 177
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
DCKL IILDRASEDLE+IR+ERKRN+E LDSLLK+V++QIFQAGGID+PLI KRRSRMCV
Sbjct: 178 DCKLSIILDRASEDLEIIRSERKRNIEILDSLLKEVSSQIFQAGGIDRPLIVKRRSRMCV 237
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
GI+ASH+YLLPDG+ LNVSSSGATYFMEPK A++ NN+EVRLS+SE AEE+ ILS+L +E
Sbjct: 238 GIRASHRYLLPDGVVLNVSSSGATYFMEPKDAIDLNNLEVRLSSSEKAEESVILSMLASE 297
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS------------ 288
IA SE +I +L+D++L++DLAFARA +AQWM+GVCPI S + DS
Sbjct: 298 IANSESDINHLLDKILKVDLAFARAAYAQWMNGVCPIFSLGNFEGRDSVEDDDDTLVTQE 357
Query: 289 ----SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS--LSKGISDFPVP 342
+++I GI+HPLLL SSL ++S + + ++ N T+ S + +GISDFPVP
Sbjct: 358 DDDLTVDIVGIRHPLLLESSLENISDNLTLRSGNAAEFGNGNGTMASKYMPQGISDFPVP 417
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
+D K+ TRVVVI+GPNTGGKTASMKTLGLASLMSKAG++LPAK +P+LPWFDLILADI
Sbjct: 418 VDFKIGHGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKNPKLPWFDLILADI 477
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GDHQSLEQNLSTFSGHISRI ILE+ S +SLVLIDEIG GTDPSEGVAL+ SILQYL+D
Sbjct: 478 GDHQSLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASILQYLKD 537
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
RV LAVVTTHYADLS +K+KDTRF+NAA EFSLETL+PTYRILWG TGDSNAL+IA+SIG
Sbjct: 538 RVNLAVVTTHYADLSSMKEKDTRFDNAAMEFSLETLQPTYRILWGCTGDSNALSIAQSIG 597
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
FDR II RAQK VE+ +PE+QQ R+ LYQSL EER +L++QA AAS+HAEIM +Y EI
Sbjct: 598 FDRNIIDRAQKWVEKFKPEQQQERRGMLYQSLQEERNQLKAQAEKAASVHAEIMSVYNEI 657
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
+ EA+DLD+R L AKETQQVQ EL AK QI+TV+Q FE QLR + D++N LI+ESE
Sbjct: 658 QGEAEDLDQREMELMAKETQQVQHELEHAKSQIETVIQKFEKQLRISGRDQLNYLIRESE 717
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
SAIA+IV+AH P D F ++E + + +TPQ GEQVHVK LG KLATVVE PGDD T++VQY
Sbjct: 718 SAIASIVKAHTPADSFPINEADRALYTPQIGEQVHVKGLGGKLATVVESPGDDGTIMVQY 777
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
GK++VRVKK+NI IP+S RKNA + + ++ R V+TSKN
Sbjct: 778 GKVKVRVKKSNIIAIPSS-RKNAVTSSSSTHQGRQVR-------IKMFRYLLSLVRTSKN 829
Query: 763 SLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
++DLRGMRVEEAS QL++A+ SVLFVIHGMGTG VKER L+IL+NHPRV +E E
Sbjct: 830 TVDLRGMRVEEASIQLEMAINASRPYSVLFVIHGMGTGAVKERALQILQNHPRVTNFEPE 889
Query: 823 SPMNYGCTVAYIK 835
SPMNYG T+AY+K
Sbjct: 890 SPMNYGSTIAYVK 902
>gi|449457723|ref|XP_004146597.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
gi|449531305|ref|XP_004172627.1| PREDICTED: mutS2 protein-like [Cucumis sativus]
Length = 890
Score = 1038 bits (2683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/849 (61%), Positives = 659/849 (77%), Gaps = 41/849 (4%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQL 59
MG V QKA + FG++ EESQKLL+QT+AA A++ S+ LD S IED++GILNSA+SG+L
Sbjct: 69 MGFDVAQKADVRFGRTREESQKLLDQTTAAEAVVSTSRRLDFSGIEDVSGILNSAISGKL 128
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
L+ +E+C+VRRTL+A ++++L +A + R+ PL+E+L+NC+FL ELE KI FC
Sbjct: 129 LTIAELCSVRRTLKAARELFEEL-QALAVGNHYSDRFLPLIEILQNCDFLVELERKIEFC 187
Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
IDC IILDRASEDLELIR E+KRNME LDSLLK+V+ +I+QAGGID+PLITKRRSRMC
Sbjct: 188 IDCNYSIILDRASEDLELIRLEKKRNMEELDSLLKEVSFKIYQAGGIDRPLITKRRSRMC 247
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
V ++A+HK L+ DGI L+ SSSGATYFMEPK AV+ NNMEVRLSNSE AEE +ILS+L+
Sbjct: 248 VAVRATHKNLVSDGILLSTSSSGATYFMEPKNAVDLNNMEVRLSNSEKAEEISILSMLST 307
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI-------NI 292
EI++SE I+ L+D++LE+DLA ARA + +WM GVCP S++ + +SSI +I
Sbjct: 308 EISESENHIRCLLDKILELDLALARAAYGRWMSGVCPCFSAKGYEGLNSSITDNTLSVDI 367
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI--DIKVECE 350
+ I++PLLL + L+ S + + DFP+PI DIK+ +
Sbjct: 368 DAIQNPLLLSNYLKKFSGS------------------------VPDFPMPIAIDIKIMHQ 403
Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
TRVVVI+GPNTGGKTAS+KTLGLASLM+KAG+YLPAKNHP+LPWFDL+LADIGDHQSLEQ
Sbjct: 404 TRVVVISGPNTGGKTASLKTLGLASLMAKAGMYLPAKNHPKLPWFDLVLADIGDHQSLEQ 463
Query: 411 NLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVT 470
NLSTFSGHISRI ILE+ S ESLVLIDEIGSGTDPSEGVAL+TSIL+YL++ V LA+VT
Sbjct: 464 NLSTFSGHISRICKILEVSSDESLVLIDEIGSGTDPSEGVALSTSILRYLKNCVNLAIVT 523
Query: 471 THYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQR 530
THYADLS +KD D+ FENAA EFSLETL+PTY+ILWGSTGDSNAL IA+SIGFD II+R
Sbjct: 524 THYADLSRIKDSDSSFENAAMEFSLETLKPTYKILWGSTGDSNALTIAESIGFDPVIIER 583
Query: 531 AQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
A++ + L PERQ RK L++SL+ ER KLE+Q + ASLHA+I LY EI++EAKDLD
Sbjct: 584 AKQWMVNLTPERQDERKGSLFKSLIGERDKLEAQRQKVASLHADISALYYEIQEEAKDLD 643
Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 650
+R L A ET++ QQE K +I+TVVQ+FE QL+ + D+INSLIK++ESAIA+I E
Sbjct: 644 KRERALMALETKRAQQEAAAIKSKIETVVQEFEEQLKTSGTDQINSLIKKAESAIASICE 703
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
A+ P + S NT+S+TPQ GEQV V LG+KLATVVEV D++ +LVQYGK++ RVK
Sbjct: 704 AYSPTEHSRPSVANTNSYTPQLGEQVFVTGLGNKLATVVEVSDDEEMILVQYGKIKARVK 763
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA----SYGPRVQTSKNSLDL 766
K++++ +PNS +K AAN P +KQ RQS + S +E+ SYGP VQTSKN++DL
Sbjct: 764 KSSVKALPNSGKKAAANTLPFSKKQ--GRQSRESVSRPDESKDGDSYGPVVQTSKNTVDL 821
Query: 767 RGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
RGMRVEEAS+ LD+A+A S SVLF+IHGMGTG VKE VLE LR HPRVAKY+QESPMN
Sbjct: 822 RGMRVEEASYHLDMAIASRGSNSVLFIIHGMGTGAVKEHVLETLRKHPRVAKYDQESPMN 881
Query: 827 YGCTVAYIK 835
YGCTVA++K
Sbjct: 882 YGCTVAFLK 890
>gi|334183641|ref|NP_001185315.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
gi|6227005|gb|AAF06041.1|AC009360_6 Contains similarity to gb|D90908 DNA mismatch repair protein MutS2
from Synechocystis sp. and is a member of PF|00488 Muts
family of mismatch repair proteins [Arabidopsis
thaliana]
gi|332196205|gb|AEE34326.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
Length = 876
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/839 (57%), Positives = 628/839 (74%), Gaps = 37/839 (4%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALA---MMQSQPLDLSTIEDIAGILNSAVSG 57
MG + + A+IP G S EES+ LLN+TSAALA MM+S+ L LS I+D++ I+ AVSG
Sbjct: 71 MGLSATKNAEIPVGNSPEESRNLLNETSAALAAMEMMKSRGLGLSEIQDLSDIVERAVSG 130
Query: 58 QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
QLL+ E+C VR TL A + ++KL +AA D R +PL+++L+ C+F L++KI
Sbjct: 131 QLLTVRELCTVRSTLTAATSTFQKLRKAAISDN----RVTPLVDILQGCDFKDTLQQKIS 186
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
FCIDC + +ILDRASEDLE+IR+ER+RNMENLDSLLKK++ +IF AGGI+KPLIT+RRSR
Sbjct: 187 FCIDCNMTMILDRASEDLEIIRSERRRNMENLDSLLKKISTKIFLAGGINKPLITQRRSR 246
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
MCV I+A+HK LLP G+ L+VSSS AT F+EPK AVE NNMEVR +NSE AEE AILS+L
Sbjct: 247 MCVAIRATHKSLLPGGVVLSVSSSRATCFIEPKEAVELNNMEVRHANSEKAEEMAILSIL 306
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
T+E+ ++REI +L+DR+LE+D+AFARA A W++GV P ++S+ + +++I+ +H
Sbjct: 307 TSEVVMAQREILHLLDRILELDIAFARASHANWINGVYPNVTSEHTKTPGLAVDIDSAQH 366
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLLLGS L S P D+ FPVP+DIKVE +VVVI+
Sbjct: 367 PLLLGSVLGS---------PNGGDI----------------FPVPVDIKVESSAKVVVIS 401
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKTA +KTLGL SLMSK+G+YLPAKN PRLPWFDLILADIGD QSLEQ+LSTFSG
Sbjct: 402 GPNTGGKTALLKTLGLLSLMSKSGMYLPAKNCPRLPWFDLILADIGDPQSLEQSLSTFSG 461
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
HISRI IL++ S SLVL+DEI SGTDPSEGVALATSILQY+++RV +AVV+THY DLS
Sbjct: 462 HISRIRQILDIASENSLVLLDEICSGTDPSEGVALATSILQYIKNRVNVAVVSTHYGDLS 521
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
LKD + RF+NAA EFS+ETL+PT+R+LWGSTG SNAL +AKSIGF+++I++ A K E+
Sbjct: 522 RLKDNEPRFQNAAMEFSMETLQPTFRVLWGSTGLSNALRVAKSIGFNKRILENAHKWTEK 581
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
L PE+ RK L+QSLMEER KL+ QA A+ H ++M+LY E+E E+ DLD+R L
Sbjct: 582 LNPEQDVERKGSLFQSLMEERNKLKLQATKTAAFHRDLMNLYHELEHESHDLDKRERALL 641
Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
KETQ+VQ++LN AK +++ +V +FE+QL AD+ NSLI ++E A+A I+EA P D
Sbjct: 642 KKETQKVQEDLNSAKSKMERLVAEFESQLEITQADQYNSLILKTEEAVAEIIEACCPMDP 701
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG-DDDTVLVQYGKMRVRVKKNNIRP 716
S+ E S ++PQ GE+V V LGDKL TVVE PG DDDTVLVQ+GK+RVR+KK +I+P
Sbjct: 702 DSLEE-EYSDYSPQAGEKVLVTGLGDKLGTVVEEPGDDDDTVLVQHGKIRVRIKKKDIKP 760
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+P S +N + R ++Q ++ GS E R+QTSKN+LDLRGMR EEA H
Sbjct: 761 LPRSTSSQTSNRSLRSKRQINMKELGSVLQMQSEPV---RIQTSKNTLDLRGMRAEEAVH 817
Query: 777 QLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
QLD+A++ +S S+LF+IHGMG G++KE VLE LR + RV++YEQ +PMN+GCTVAYIK
Sbjct: 818 QLDMAISGRDSGSILFIIHGMGAGIIKELVLERLRKNTRVSRYEQANPMNHGCTVAYIK 876
>gi|297840849|ref|XP_002888306.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334147|gb|EFH64565.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 891
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/847 (57%), Positives = 631/847 (74%), Gaps = 46/847 (5%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSG 57
MG + + A+IP G S EES+ LL++T+AALA M+ SQ L LS I+D++ I+ AV+G
Sbjct: 79 MGLSATKNAEIPVGNSPEESRNLLDETAAALAAMEMMESQRLGLSEIQDLSDIVERAVAG 138
Query: 58 QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
QLL+ E+C+VR TL A +V++KL +AA D +R SPL+ L++ C+F L++KIG
Sbjct: 139 QLLTVRELCSVRSTLMAATSVFQKLRKAAISD----KRVSPLVGLVQGCDFKDTLQQKIG 194
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
FCIDC + +ILDRASEDLE+IR+ER+RNME LDSLLKK++ QIFQAGGID+PLIT+RRSR
Sbjct: 195 FCIDCNMSMILDRASEDLEIIRSERRRNMEKLDSLLKKISTQIFQAGGIDRPLITQRRSR 254
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
MCV I+A+HK LLP G+ L+VSSS AT ++EPK AVE NNMEVR +NSE AEE AILS+L
Sbjct: 255 MCVAIRATHKSLLPGGVVLSVSSSRATCYIEPKEAVELNNMEVRHANSEKAEEMAILSIL 314
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ---------SHVSFDS 288
T+E++ ++++I +L+DR+LE+D+AFARA A+WM+GV P ++S+ H S
Sbjct: 315 TSEVSMAQKDILHLLDRILELDIAFARASHAKWMNGVYPNVTSEHTKTPGLGGDHKSL-- 372
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
S++I+ +HPLLLGS L GS + G+ FPVPIDIKVE
Sbjct: 373 SVDIDSAQHPLLLGSVL------------------------GSPNDGMV-FPVPIDIKVE 407
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+VVVI+GPNTGGKTA +KTLGL SLMSK+G+YLPAKN PRLPWFD ILADIGD QSL
Sbjct: 408 SRAKVVVISGPNTGGKTALLKTLGLISLMSKSGMYLPAKNCPRLPWFDFILADIGDPQSL 467
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFSGHISRI IL++ S SLVL+DEI SGTDPSEGVALATSILQY+++RV +AV
Sbjct: 468 EQSLSTFSGHISRIRQILDIASENSLVLLDEICSGTDPSEGVALATSILQYIKNRVNVAV 527
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
V+THY DLS LKD + +F+NAA EFS+ETL+PT+R+LWGSTG SNAL +AKSIGF+ I+
Sbjct: 528 VSTHYGDLSRLKDNEPQFQNAAMEFSMETLQPTFRVLWGSTGLSNALTVAKSIGFNTGIL 587
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
+ A K E+L PE+ RK L+QSL+EER KL+ QA + H ++M+LY E+E E+ D
Sbjct: 588 ENAHKWTEKLNPEQDVERKGSLFQSLVEERNKLKLQASKTEAFHRDLMNLYHELEHESHD 647
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
L++R L KETQ+VQ++LN AK ++ +V +F++QL A AD+ NSLI ++E A+A I
Sbjct: 648 LEKRERALLKKETQKVQEDLNSAKSKMQKLVAEFKSQLEIAQADQYNSLILKTEEAVAEI 707
Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
+EA P D S+ E S ++PQ GE+V V LGDKL TVVE PGDD+TVLVQ+GK+RVR
Sbjct: 708 IEACCPIDLDSIEEP-YSDYSPQAGEKVLVTGLGDKLGTVVEEPGDDETVLVQHGKIRVR 766
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
+KK +I+P+P S +N + R ++Q + GS + S R+QTSKN+LDLRG
Sbjct: 767 IKKKDIKPLPRSTSSQTSNRSLRSKRQVNMKDLGSVLQMQQ--SEPVRIQTSKNTLDLRG 824
Query: 769 MRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
MR EEA HQLD+A++ +S S+LF+IHGMGTGV+KE VLE LR H RV++YEQ +PMNYG
Sbjct: 825 MRAEEAVHQLDMAISGRDSGSILFIIHGMGTGVIKELVLERLRKHTRVSRYEQANPMNYG 884
Query: 829 CTVAYIK 835
CTVAYIK
Sbjct: 885 CTVAYIK 891
>gi|242074804|ref|XP_002447338.1| hypothetical protein SORBIDRAFT_06g033170 [Sorghum bicolor]
gi|241938521|gb|EES11666.1| hypothetical protein SORBIDRAFT_06g033170 [Sorghum bicolor]
Length = 912
Score = 877 bits (2265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/851 (54%), Positives = 625/851 (73%), Gaps = 47/851 (5%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G A + ++P G+S EES++ ++QT+AA+ + PLD +ED++ ++ +A SG+ L+
Sbjct: 92 GRAACEGRRVPVGRSREESERFIDQTAAAVLL--PTPLDFGGVEDVSALVAAAASGRALA 149
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
E+CAV R++RAV V+ +L A+ D RYS L+++L+ C+FLTEL ++I FC+D
Sbjct: 150 VRELCAVGRSIRAVRAVFDQLKRLADEMPDG--RYSSLVDILQGCDFLTELVQRIEFCLD 207
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
L ++LDRAS+ LE+IR ER+RN+E L+SLLK AA+IFQAGGID PL+TKRRSRMCVG
Sbjct: 208 STLSLVLDRASKKLEIIRRERRRNIEMLESLLKDTAAKIFQAGGIDSPLVTKRRSRMCVG 267
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KASHK+L+P GI L+ S SGATYF+EP+ AVE NN EV+LS E AEE AILSLLT+ I
Sbjct: 268 VKASHKHLVPGGIVLSSSGSGATYFVEPRDAVELNNREVKLSGDERAEELAILSLLTSMI 327
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
A S+ +I+ LMD+VLE+DLA AR +A+W +GV P S SQS D S+ IEGI+
Sbjct: 328 ADSQLKIRNLMDKVLELDLACARGSYARWTNGVKPTFSDSYTISQSDQCTDYSVYIEGIR 387
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLLL E S M S ++ S+ PVP+D+ V+ R+VVI
Sbjct: 388 HPLLL---------------------EQSLMAEESTTRA-SEMPVPLDMWVKKHARIVVI 425
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
+GPNTGGKTA+MKTLGL+SLMSKAG++ PAK PR+PWFD +LADIGDHQSLE +LSTFS
Sbjct: 426 SGPNTGGKTATMKTLGLSSLMSKAGMFFPAKGSPRIPWFDQVLADIGDHQSLEHSLSTFS 485
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
GHISR+ I+E+VS++SLVLIDEIGSGTDPSEGVAL+TSIL+YL +V LA+VTTHYADL
Sbjct: 486 GHISRLRKIVEIVSKDSLVLIDEIGSGTDPSEGVALSTSILKYLASKVNLAIVTTHYADL 545
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
S L+ D RFENAA EF +ETL+PTYRILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE
Sbjct: 546 SRLQSVDNRFENAAMEFCVETLQPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQEWVE 605
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
+L P++Q+ R+ LY SL++E++ LESQA AAS+ +++ LY EI EA DL+ R A L
Sbjct: 606 KLLPDKQKERQGLLYDSLLDEKKLLESQANEAASVLSQVEGLYNEIRLEADDLESRVAGL 665
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
+A+ETQ+VQQEL K Q+DT++++FE QL+++ ++ NSL++++E+A A++V AH+P++
Sbjct: 666 RARETQKVQQELKVVKSQMDTIIKNFEAQLKNSKLEQYNSLMRKAEAATASVVAAHQPNE 725
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI- 714
+ N SSF PQ G++V+++ L G +ATVVE G+D++ +VQYGK++VRVK+N I
Sbjct: 726 ITFDDDENQSSFVPQIGDKVYIQGLGGGTMATVVETFGEDESCMVQYGKIKVRVKRNKIK 785
Query: 715 ---RPIPN----SKRKNAANPAPRLRK---QQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
R I N S A P+ R + DR GS S+GP VQTSKN++
Sbjct: 786 LVQRGINNEATTSSSVKAKGRTPKQRSATTAEADRNQDGGGS----ISFGPVVQTSKNTV 841
Query: 765 DLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 824
DLRG RV EA+++L +A+ + VLFV+HGMGTG VKER +++LRNHPRVAK+E ESP
Sbjct: 842 DLRGKRVSEAAYELQMAIDACRTYQVLFVVHGMGTGAVKERAIDVLRNHPRVAKFEDESP 901
Query: 825 MNYGCTVAYIK 835
+NYGCTVAYI+
Sbjct: 902 LNYGCTVAYIQ 912
>gi|218195837|gb|EEC78264.1| hypothetical protein OsI_17950 [Oryza sativa Indica Group]
Length = 916
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/840 (52%), Positives = 618/840 (73%), Gaps = 21/840 (2%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G A + ++P G+S EES++LL QT+AA + D +ED++ + +A +LL+
Sbjct: 92 GRAACGEGRVPVGRSREESERLLEQTAAAALLPAPL--DFGGVEDVSSAIAAAAGARLLA 149
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
EIC V R++RA V+ +L +E D + Y+PLL+++++C+FLTEL ++I FC+D
Sbjct: 150 VREICGVGRSIRAARRVFDQLKTLSEETPDG-RSYTPLLDIMQDCDFLTELVQRIEFCLD 208
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
L ++LDRAS+ L IR ER++N++ L+SLL+ + +IFQ GGID P++TKRRSRMCVG
Sbjct: 209 YTLSVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVG 268
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KASHK+L+P GI L+ S SGATYFMEP+ A+ NNMEV+LS E AEE AIL LLT+ I
Sbjct: 269 VKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSI 328
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
A SE +I++LM ++LE+DLA AR +A W++ V P + +Q + + + S+ IEGI+
Sbjct: 329 ADSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQ 388
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLLL +SLS ++ K + + + +S P+P+D++V +TR++VI
Sbjct: 389 HPLLLE---QSLSMVKESTGVGKGQLSDEHL--------VSPMPIPLDMQVRNDTRIIVI 437
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
+GPNTGGKTA+MKTLGLASLMSKAG++ PAK PRLPWFD +LADIGDHQSLE +LSTFS
Sbjct: 438 SGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFS 497
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
GHISR+ I+++VS++SLVLIDEIGSGTDPS+GVAL+TSIL+YL R+ LA+VTTHYADL
Sbjct: 498 GHISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALSTSILKYLASRLNLAIVTTHYADL 557
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
S LK D RFENAA EF LETL+PTY+ILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE
Sbjct: 558 SRLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQEWVE 617
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
+L P++Q+ R+ LY SL++ER+ LESQA AAS+ +++ LY EI EA DLD R A L
Sbjct: 618 KLLPDKQKERQGLLYGSLLDERKLLESQANEAASVVSDVERLYNEIRSEADDLDSRVAAL 677
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
+A E+++VQQEL F K Q+D ++++FE+QL+++ ++ NSL++++E+A A++ H+P D
Sbjct: 678 RATESEKVQQELKFVKSQMDQIIKNFESQLKNSELEQYNSLMRKAEAATASLAATHQPTD 737
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
E N SS+ P+ G++V+V+ L G +A+VVE G+D + +VQYGK++VRVK N I+
Sbjct: 738 FTFGDEENESSYVPEIGDKVYVEGLGGGSMASVVETLGEDGSCMVQYGKIKVRVKGNKIK 797
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
+ + +A+ +P K + ++S + + + S+GP VQTSKN++DLRGMRV EAS
Sbjct: 798 LVQRGTKDTSAS-SPVKGKGRTPKRSAAEANQDGNVSFGPVVQTSKNTVDLRGMRVAEAS 856
Query: 776 HQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
H+L +A+ S VLFV+HGMGTG VKE L ILRNHPRVAK+E ESP+NYGCTVAYI+
Sbjct: 857 HELQMAIDGCRSYQVLFVVHGMGTGAVKECALGILRNHPRVAKFEDESPLNYGCTVAYIE 916
>gi|32487407|emb|CAE05741.1| OSJNBb0017I01.21 [Oryza sativa Japonica Group]
Length = 921
Score = 868 bits (2244), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/842 (52%), Positives = 618/842 (73%), Gaps = 25/842 (2%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G A + ++P G+S EES++LL QT+AA + D +ED++ + +A +LL+
Sbjct: 97 GRAACGEGRVPVGRSREESERLLEQTAAAALLPAPL--DFGGVEDVSAAIAAAAGARLLA 154
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
EIC V R++RA V+ +L +E D + Y+PLL+++++C+FLTEL ++I FC+D
Sbjct: 155 VREICGVGRSIRAARRVFDQLKTLSEETPDG-RSYTPLLDIMQDCDFLTELVQRIEFCLD 213
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
L ++LDRAS+ L IR ER++N++ L+SLL+ + +IFQ GGID P++TKRRSRMCVG
Sbjct: 214 YTLSVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVG 273
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KASHK+L+P GI L+ S SGATYFMEP+ A+ NNMEV+LS E AEE AIL LLT+ I
Sbjct: 274 VKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSI 333
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
A SE +I++LM ++LE+DLA AR +A W++ V P + +Q + + + S+ IEGI+
Sbjct: 334 ADSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQ 393
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG--ISDFPVPIDIKVECETRVV 354
HPLLL SL + E++ + G LS +S P+P+D++V +TR++
Sbjct: 394 HPLLLEQSLSMVK-------------ESTRVGKGQLSDEHLVSPMPIPLDMQVRNDTRII 440
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VI+GPNTGGKTA+MKTLGLASLMSKAG++ PAK PRLPWFD +LADIGDHQSLE +LST
Sbjct: 441 VISGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLST 500
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FSGHISR+ I+++VS++SLVLIDEIGSGTDPS+GVAL+TSIL+YL R+ LA+VTTHYA
Sbjct: 501 FSGHISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALSTSILKYLASRLNLAIVTTHYA 560
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
DLS LK D RFENAA EF LETL+PTY+ILWGSTG+SNAL+IAKSIGFD+K++ RAQ+
Sbjct: 561 DLSRLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQEW 620
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
VE+L P++Q+ R+ LY SL++ER+ LESQA AAS+ +++ LY EI EA DLD R A
Sbjct: 621 VEKLLPDKQKERQGLLYGSLLDERKLLESQANEAASVLSDVERLYNEIRSEADDLDSRVA 680
Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP 654
L+A E+++VQQEL F K Q+D ++++FE+QL+++ ++ NSL++++E+A A++ H+P
Sbjct: 681 ALRATESEKVQQELKFVKSQMDQIIKNFESQLKNSELEQYNSLMRKAEAATASLAATHQP 740
Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
D E N SS+ P+ G++V+V+ L G +A+VVE G+D + +VQYGK++VRVK N
Sbjct: 741 TDFTFGDEENESSYVPEIGDKVYVEGLGGGSMASVVETLGEDGSCMVQYGKIKVRVKGNK 800
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
I+ + + +A+ +P K + ++S + + + S+GP VQTSKN++DLRGMRV E
Sbjct: 801 IKLVQRGTKDTSAS-SPVKGKGRTPKRSAAEANQDGNVSFGPVVQTSKNTVDLRGMRVAE 859
Query: 774 ASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAY 833
ASH+L +A+ S VLFV+HGMGTG VKE L ILRNHPRVAK+E ESP+NYGCTVAY
Sbjct: 860 ASHELQMAIDGCRSYQVLFVVHGMGTGAVKECALGILRNHPRVAKFEDESPLNYGCTVAY 919
Query: 834 IK 835
I+
Sbjct: 920 IE 921
>gi|357162691|ref|XP_003579491.1| PREDICTED: mutS2 protein-like [Brachypodium distachyon]
Length = 927
Score = 862 bits (2227), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/844 (53%), Positives = 614/844 (72%), Gaps = 39/844 (4%)
Query: 9 AQIPFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEI 65
++P G+S EES++LL QT+AA A++ S PLD + D++ ++ +A G+LL+ EI
Sbjct: 106 GRVPVGRSREESERLLEQTAAAAALLSSSSSAPLDFGGVGDVSAVVAAAARGRLLAVREI 165
Query: 66 CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
C V R+LRA V+ ++ + D +RYSPLL++L++C+FLTEL + I FC+D L
Sbjct: 166 CGVGRSLRAARGVFDQVKGLTDEMPD--ERYSPLLDILQDCDFLTELVQMIEFCLDSNLS 223
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
++LDRASE L IR ER+ N+E L+SLL+ + +IFQAGG+D PL+TKRRSRMCVG+KAS
Sbjct: 224 MVLDRASEKLGTIRKERRSNIEILESLLRDASMKIFQAGGVDSPLVTKRRSRMCVGVKAS 283
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
HK+LLP GI L+ S SGATYFMEP+ AV+ NNMEV+LS+ E EE A+L LLT+ IA S
Sbjct: 284 HKHLLPGGIVLSSSGSGATYFMEPRDAVKLNNMEVKLSSDERTEELAVLGLLTSRIADSR 343
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIKHPLL 300
+I++LM +++E+DLA AR +A W++GV P S Q S D S+ I+GI+HPLL
Sbjct: 344 MKIRHLMGKIMELDLACARGSYALWINGVRPAFSDRDNSGQLDPSSDFSVFIDGIQHPLL 403
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK--GISDFPVPIDIKVECETRVVVITG 358
L S ++ S+ E+ G LS+ +S PVP+D+ V+ +TR+VVI+G
Sbjct: 404 LEQSF-GIAKGST------------EVGKGQLSEEHPVSSMPVPLDMHVKSDTRIVVISG 450
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKTA+MKTLGLA+LMSKAG++ PAK P+LPWFD +LADIGDHQSLE +LSTFSG+
Sbjct: 451 PNTGGKTATMKTLGLATLMSKAGMFFPAKGSPKLPWFDQVLADIGDHQSLENSLSTFSGN 510
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
ISR+ I+++VSR+SLVLIDEIGSGTDPSEGV+L+TSIL+YL R+ LA+VTTHYADLS
Sbjct: 511 ISRLRKIVQVVSRDSLVLIDEIGSGTDPSEGVSLSTSILKYLAGRLNLAIVTTHYADLSR 570
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
LK D RFENAA EF LETL+PTYRILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE+L
Sbjct: 571 LKAVDGRFENAAMEFCLETLKPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQEWVEKL 630
Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
P++Q+ R+ LY SL++ER LESQA AS+ +E+ LY EI EA DLD R A L+A
Sbjct: 631 LPDKQKERQGLLYGSLLDERNLLESQANEVASVLSEVEVLYNEICLEADDLDNRVAALRA 690
Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
+E+Q+VQ EL K Q+D ++++FE QL+++ ++ NS++K++E++ A++ AH+P +
Sbjct: 691 RESQKVQHELKLVKSQMDLIIRNFEVQLKNSKLEQYNSVMKKAEASTASLAAAHQPTEFA 750
Query: 659 SVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
+ N SS+ PQ G++V+V+ L G LATVVE+ +D + +VQYGK++VR K N ++
Sbjct: 751 FSDDENKSSYVPQIGDKVYVEGLGGGSLATVVEILSEDGSCMVQYGKIKVRAKNNKMKLA 810
Query: 718 PNSKRKNAANPA------PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
++ +A+ + P R E +Q GS S+GP VQTSKN++DLRGMRV
Sbjct: 811 QRDTKETSASSSVQGKGRPVKRSSPETKQDGS-------ISFGPVVQTSKNTVDLRGMRV 863
Query: 772 EEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTV 831
EASH+L +A+ S VLFV+HGMGTG VKE L+ILR+HPRVAK E ESP+NYGCTV
Sbjct: 864 SEASHELQMAIDGCRSYQVLFVVHGMGTGAVKECALDILRSHPRVAKLEDESPLNYGCTV 923
Query: 832 AYIK 835
AYI+
Sbjct: 924 AYIE 927
>gi|414584744|tpg|DAA35315.1| TPA: hypothetical protein ZEAMMB73_219783 [Zea mays]
Length = 901
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/841 (53%), Positives = 615/841 (73%), Gaps = 36/841 (4%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G A + ++P G+S EES++L++QT+AA+ + PLD +ED++ ++ +AV+G+ L+
Sbjct: 90 GRAACEGGRVPVGRSREESERLIDQTAAAVLL--PTPLDFGGVEDVSALVAAAVAGRALA 147
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
E+CAV R++RAV V+ +L A+ D RYS L+++L+ C+FLTEL ++I FC+D
Sbjct: 148 VRELCAVGRSIRAVRAVFHQLKRLADEMPDG--RYSSLVDILQGCDFLTELVQRIEFCLD 205
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
L ++LDRAS+ LE+IR ER+RN+E L+SLLK AA+IF AGGID PL+TKRRSRMCVG
Sbjct: 206 STLSLVLDRASKKLEIIRRERRRNIEMLESLLKDTAAKIFLAGGIDNPLVTKRRSRMCVG 265
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KASHK+L+P GI L+ S SGATYFMEP+ AVE NN EV+LS E AEE +LSLLT+ I
Sbjct: 266 VKASHKHLMPGGIVLSSSGSGATYFMEPQDAVELNNREVKLSGEERAEELVVLSLLTSMI 325
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
A S+ +I+ LMD VLE+DLA AR +A W + V P + SQS D SI IEGI+
Sbjct: 326 ADSQLKIRNLMDNVLELDLACARGSYALWTNSVRPTFTDSYTISQSDQCNDYSIYIEGIR 385
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLLL SL + +S E SEM PVP+D+ V+ R+VVI
Sbjct: 386 HPLLLEQSLMAE----------ESTTEASEM------------PVPLDMWVKKNARIVVI 423
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
+GPNTGGKTA+MKTLGL+SLMSKAG++ PAK PR+PWFD +LADIGDHQSLE +LSTFS
Sbjct: 424 SGPNTGGKTATMKTLGLSSLMSKAGIFFPAKGRPRIPWFDQVLADIGDHQSLEHSLSTFS 483
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
GHISR+ I+E+VS++SLVLIDEIGSGTDP+EGVAL+TSIL+YL RV LA+VTTHYADL
Sbjct: 484 GHISRLRKIVEMVSKDSLVLIDEIGSGTDPAEGVALSTSILKYLASRVNLAIVTTHYADL 543
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
S L+ D RFENAA EF +ETL+PTYRILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE
Sbjct: 544 SRLQSVDNRFENAAMEFCVETLQPTYRILWGSTGNSNALSIAKSIGFDQKVLDRAQEWVE 603
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
+L P++Q+ R+ LY SL++E+ LESQA AAS+ +++ LY EI EA DL+ R A L
Sbjct: 604 KLLPDKQKERQGLLYDSLVDEKELLESQANEAASVLSQVEGLYNEIRLEADDLESRVAAL 663
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
+A+ETQ+VQQEL K ++DT++++FE QL+++ ++ NSL++++E+A A++V AH+P +
Sbjct: 664 RARETQKVQQELKVVKYRMDTIIKNFEAQLKNSKLEQYNSLMRKAEAATASVVAAHQPSE 723
Query: 657 -DFSVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
F + N SF Q G++V+V+ L G+ +ATVVE G+D++ +VQYGK++VRVK++ I
Sbjct: 724 IAFDDDDENRISFVSQVGDKVYVQGLGGETMATVVETLGEDESCMVQYGKIKVRVKRSRI 783
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
+ + A + K + +Q ++ + S+GP VQTSKN++DLRG RV EA
Sbjct: 784 KLVQRGTNNEATTSSSVKAKGRTPKQR---SATTTDVSFGPVVQTSKNTVDLRGKRVSEA 840
Query: 775 SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
+ +L +A+ VLFV+HGMGTG VK+ +++LR HPRVA++E ESP+NYGCTVAYI
Sbjct: 841 AFELRMAVDACRPYQVLFVVHGMGTGAVKDCAIDVLRKHPRVARFEDESPLNYGCTVAYI 900
Query: 835 K 835
+
Sbjct: 901 Q 901
>gi|90399000|emb|CAJ86270.1| H0901F07.7 [Oryza sativa Indica Group]
Length = 889
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/840 (52%), Positives = 603/840 (71%), Gaps = 48/840 (5%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G A + ++P G+S EES++LL QT+AA + D +ED++ + +A +LL+
Sbjct: 92 GRAACGEGRVPVGRSREESERLLEQTAAAALLPAPL--DFGGVEDVSSAIAAAAGARLLA 149
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
EIC V R++RA V+ +L +E D + Y+PLL+++++C+FLTEL ++I FC+D
Sbjct: 150 VREICGVGRSIRAARRVFDQLKTLSEETPDG-RSYTPLLDIMQDCDFLTELVQRIEFCLD 208
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
L ++LDRAS+ L IR ER++N++ L+SLL+ + +IFQ GGID P++TKRRSRMCVG
Sbjct: 209 YTLSVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVG 268
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KASHK+L+P GI L+ S SGATYFMEP+ A+ NNMEV+LS E AEE AIL LLT+ I
Sbjct: 269 VKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSI 328
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
A SE +I++LM ++LE+DLA AR +A W++ V P + +Q + + + S+ IEGI+
Sbjct: 329 ADSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQ 388
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLLL +SLS ++ K + + + +S P+P+D++V +TR++VI
Sbjct: 389 HPLLLE---QSLSMVKESTGVGKGQLSDEHL--------VSPMPIPLDMQVRNDTRIIVI 437
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
+GPNTGGKTA+MKTLGLASLMSKAG++ PAK PRLPWFD +LADIGDHQSLE +LSTFS
Sbjct: 438 SGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFS 497
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
GHISR+ I+++VS++SLVLIDEIGSGTDPS+GVAL+TSIL+YL R+ LA+VTTHYADL
Sbjct: 498 GHISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALSTSILKYLASRLNLAIVTTHYADL 557
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
S LK D RFENAA EF LETL+PTY+ILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE
Sbjct: 558 SRLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQEWVE 617
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
+L P++Q+ R+ LY SL++ER+ LESQA AAS+ +++ LY EI EA DLD R A L
Sbjct: 618 KLLPDKQKERQGLLYGSLLDERKLLESQANEAASVVSDVERLYNEIRSEADDLDSRVAAL 677
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
+A E+++VQQEL F K Q+D ++++FE+QL+++ ++ NSL++++E+A A++ H+P D
Sbjct: 678 RATESEKVQQELKFVKSQMDQIIKNFESQLKNSELEQYNSLMRKAEAATASLAATHQPTD 737
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
E N SS+ P+ G++V+V+ L G +A+VVE G+D + +VQYGK++ R K
Sbjct: 738 FTFGDEENESSYVPEIGDKVYVEGLGGGSMASVVETLGEDGSCMVQYGKIKGRTPK---- 793
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
R E Q G+ S+GP VQTSKN++DLRGMRV EAS
Sbjct: 794 -----------------RSAAEANQDGN-------VSFGPVVQTSKNTVDLRGMRVAEAS 829
Query: 776 HQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
H+L +A+ S VLFV+HGMGTG VKE L ILRNHPRVAK+E ESP+NYGCTVAYI+
Sbjct: 830 HELQMAIDGCRSYQVLFVVHGMGTGAVKECALGILRNHPRVAKFEDESPLNYGCTVAYIE 889
>gi|222629785|gb|EEE61917.1| hypothetical protein OsJ_16650 [Oryza sativa Japonica Group]
Length = 841
Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/779 (54%), Positives = 579/779 (74%), Gaps = 29/779 (3%)
Query: 65 ICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKL 124
+CA L V + K L+E DG S Y+PLL+++++C+FLTEL ++I FC+D L
Sbjct: 84 VCA---RLAGVFDQLKTLSEETP-DGRS---YTPLLDIMQDCDFLTELVQRIEFCLDYTL 136
Query: 125 LIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
++LDRAS+ L IR ER++N++ L+SLL+ + +IFQ GGID P++TKRRSRMCVG+KA
Sbjct: 137 SVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVGVKA 196
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
SHK+L+P GI L+ S SGATYFMEP+ A+ NNMEV+LS E AEE AIL LLT+ IA S
Sbjct: 197 SHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSIADS 256
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIKHPL 299
E +I++LM ++LE+DLA AR +A W++ V P + +Q + + + S+ IEGI+HPL
Sbjct: 257 EMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQHPL 316
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG--ISDFPVPIDIKVECETRVVVIT 357
LL SL + E++ + G LS +S P+P+D++V +TR++VI+
Sbjct: 317 LLEQSLSMVK-------------ESTRVGKGQLSDEHLVSPMPIPLDMQVRNDTRIIVIS 363
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKTA+MKTLGLASLMSKAG++ PAK PRLPWFD +LADIGDHQSLE +LSTFSG
Sbjct: 364 GPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQSLEHSLSTFSG 423
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
HISR+ I+++VS++SLVLIDEIGSGTDPS+GVAL+TSIL+YL R+ LA+VTTHYADLS
Sbjct: 424 HISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALSTSILKYLASRLNLAIVTTHYADLS 483
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
LK D RFENAA EF LETL+PTY+ILWGSTG+SNAL+IAKSIGFD+K++ RAQ+ VE+
Sbjct: 484 RLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNALSIAKSIGFDQKVLARAQEWVEK 543
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
L P++Q+ R+ LY SL++ER+ LESQA AAS+ +++ LY EI EA DLD R A L+
Sbjct: 544 LLPDKQKERQGLLYGSLLDERKLLESQANEAASVLSDVERLYNEIRSEADDLDSRVAALR 603
Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
A E+++VQQEL F K Q+D ++++FE+QL+++ ++ NSL++++E+A A++ H+P D
Sbjct: 604 ATESEKVQQELKFVKSQMDQIIKNFESQLKNSELEQYNSLMRKAEAATASLAATHQPTDF 663
Query: 658 FSVSETNTSSFTPQFGEQVHVKSL-GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
E N SS+ P+ G++V+V+ L G +A+VVE G+D + +VQYGK++VRVK N I+
Sbjct: 664 TFGDEENESSYVPEIGDKVYVEGLGGGSMASVVETLGEDGSCMVQYGKIKVRVKGNKIKL 723
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ + +A+ +P K + ++S + + + S+GP VQTSKN++DLRGMRV EASH
Sbjct: 724 VQRGTKDTSAS-SPVKGKGRTPKRSAAEANQDGNVSFGPVVQTSKNTVDLRGMRVAEASH 782
Query: 777 QLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
+L +A+ S VLFV+HGMGTG VKE L ILRNHPRVAK+E ESP+NYGCTVAYI+
Sbjct: 783 ELQMAIDGCRSYQVLFVVHGMGTGAVKECALGILRNHPRVAKFEDESPLNYGCTVAYIE 841
>gi|15217840|ref|NP_176687.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
gi|332196204|gb|AEE34325.1| DNA mismatch repair protein MutS2 [Arabidopsis thaliana]
Length = 857
Score = 816 bits (2108), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/739 (57%), Positives = 554/739 (74%), Gaps = 34/739 (4%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALA---MMQSQPLDLSTIEDIAGILNSAVSG 57
MG + + A+IP G S EES+ LLN+TSAALA MM+S+ L LS I+D++ I+ AVSG
Sbjct: 71 MGLSATKNAEIPVGNSPEESRNLLNETSAALAAMEMMKSRGLGLSEIQDLSDIVERAVSG 130
Query: 58 QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
QLL+ E+C VR TL A + ++KL +AA D R +PL+++L+ C+F L++KI
Sbjct: 131 QLLTVRELCTVRSTLTAATSTFQKLRKAAISD----NRVTPLVDILQGCDFKDTLQQKIS 186
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
FCIDC + +ILDRASEDLE+IR+ER+RNMENLDSLLKK++ +IF AGGI+KPLIT+RRSR
Sbjct: 187 FCIDCNMTMILDRASEDLEIIRSERRRNMENLDSLLKKISTKIFLAGGINKPLITQRRSR 246
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
MCV I+A+HK LLP G+ L+VSSS AT F+EPK AVE NNMEVR +NSE AEE AILS+L
Sbjct: 247 MCVAIRATHKSLLPGGVVLSVSSSRATCFIEPKEAVELNNMEVRHANSEKAEEMAILSIL 306
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
T+E+ ++REI +L+DR+LE+D+AFARA A W++GV P ++S+ + +++I+ +H
Sbjct: 307 TSEVVMAQREILHLLDRILELDIAFARASHANWINGVYPNVTSEHTKTPGLAVDIDSAQH 366
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLLLGS L S P D+ FPVP+DIKVE +VVVI+
Sbjct: 367 PLLLGSVLGS---------PNGGDI----------------FPVPVDIKVESSAKVVVIS 401
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKTA +KTLGL SLMSK+G+YLPAKN PRLPWFDLILADIGD QSLEQ+LSTFSG
Sbjct: 402 GPNTGGKTALLKTLGLLSLMSKSGMYLPAKNCPRLPWFDLILADIGDPQSLEQSLSTFSG 461
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
HISRI IL++ S SLVL+DEI SGTDPSEGVALATSILQY+++RV +AVV+THY DLS
Sbjct: 462 HISRIRQILDIASENSLVLLDEICSGTDPSEGVALATSILQYIKNRVNVAVVSTHYGDLS 521
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
LKD + RF+NAA EFS+ETL+PT+R+LWGSTG SNAL +AKSIGF+++I++ A K E+
Sbjct: 522 RLKDNEPRFQNAAMEFSMETLQPTFRVLWGSTGLSNALRVAKSIGFNKRILENAHKWTEK 581
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
L PE+ RK L+QSLMEER KL+ QA A+ H ++M+LY E+E E+ DLD+R L
Sbjct: 582 LNPEQDVERKGSLFQSLMEERNKLKLQATKTAAFHRDLMNLYHELEHESHDLDKRERALL 641
Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
KETQ+VQ++LN AK +++ +V +FE+QL AD+ NSLI ++E A+A I+EA P D
Sbjct: 642 KKETQKVQEDLNSAKSKMERLVAEFESQLEITQADQYNSLILKTEEAVAEIIEACCPMDP 701
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG-DDDTVLVQYGKMRVRVKKNNIRP 716
S+ E S ++PQ GE+V V LGDKL TVVE PG DDDTVLVQ+GK+RVR+KK +I+P
Sbjct: 702 DSLEE-EYSDYSPQAGEKVLVTGLGDKLGTVVEEPGDDDDTVLVQHGKIRVRIKKKDIKP 760
Query: 717 IPNSKRKNAANPAPRLRKQ 735
+P S +N + R ++Q
Sbjct: 761 LPRSTSSQTSNRSLRSKRQ 779
>gi|168030914|ref|XP_001767967.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680809|gb|EDQ67242.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 964
Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/880 (42%), Positives = 538/880 (61%), Gaps = 58/880 (6%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
M AV +K +P G+++ ES++L QT AA + S PL+ S IED+ + A SG +
Sbjct: 98 MAVAVARKGDLPIGRTVVESEELQAQTVAA--QLLSSPLEFSGIEDLRKFIEDAQSGNVC 155
Query: 61 SPSEICAVRRTLRAVNNVWKKLT--EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
E+C VR+TL AV + ++ + L PL ++ CN +ELE I +
Sbjct: 156 QLEELCLVRKTLAAVRRLHNQVVGQSHSSLHVSGAASIGPLQAVMLGCNLCSELESAIEY 215
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
C+DC ILDRAS L +R R+ N L+SL+K+ AA +F AGG+D L+TKRR RM
Sbjct: 216 CLDCSRSTILDRASSKLASVRLMRQENSMALESLIKETAAMVFSAGGMDSQLVTKRRGRM 275
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
CV ++AS K LL G+ L+VS++GATYFMEP+ A+ FNN E++L+ E EE A+L LT
Sbjct: 276 CVAVRASQKGLLKGGVTLDVSNTGATYFMEPESAIHFNNEEIQLAEEEKLEEIAVLRQLT 335
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---------SSQSHVSFDSS 289
+ + ++ L++RV +DLA ARAG + W++G P+ SS S + D++
Sbjct: 336 FMLLDTSDDVIDLLERVTTLDLACARAGHSAWLNGARPVFVNSMADSMSSSHSSSALDTT 395
Query: 290 --------INIEGIKHPLLLGSSL-------------RSLSAASSNSNPLKSDVENSEMT 328
++I+G++HPLLLGS+L R + +S+ LK VE+S +
Sbjct: 396 PAKEDLLLVDIKGVRHPLLLGSALESPVNSPRYGIYIRQKEKSRRSSSGLKGAVESSNVD 455
Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
PVPIDI + +VV ITGPNTGGKTA++KTLG+ +LM+KAGL LPA
Sbjct: 456 --------RMLPVPIDINIRTGVKVVTITGPNTGGKTAALKTLGVVALMAKAGLCLPATG 507
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
PRLPWFD ILADIGD QSLE+NLSTFSGHI R+ ILE + +SL+L+DEIG GTDPSE
Sbjct: 508 VPRLPWFDSILADIGDDQSLERNLSTFSGHIRRVRQILEAGTAQSLILLDEIGGGTDPSE 567
Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
G ALAT+IL+ L V L + TTH A+L LKD D FENA+ EF ++TLRPTYR+LWG
Sbjct: 568 GAALATAILRNLAASVQLTLATTHCAELRTLKDHDPEFENASVEFDVKTLRPTYRVLWGI 627
Query: 509 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTA 568
G SNALNIA S+GFD +++ RA++LV +L P R +EL L+++R + ++ A
Sbjct: 628 AGQSNALNIAASLGFDSEVLTRARELVTKLVPASLGARSTELMVPLVKQRNEQLERSAAA 687
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
AS A I LY +++ EA++L ++ A L+ + + +++ A ++ ++ F+
Sbjct: 688 ASALAIISKLYNKLQSEAENLAQKEAKLRRLQEEATNKKVAHANASLEEILLKFQESAHQ 747
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP-----------QFGEQVH 677
+ ++ ++++++AI A+VE H S++ +N +S T + G++V
Sbjct: 748 KAKEDEGFSMRDAQAAIIAVVEEHATKPVASIT-SNPASITEPEGKEGEGEQLRVGDEVI 806
Query: 678 VKSLGDKLATVVEVP-GDDDTVLVQYGKMRVRVKKNNIRP-IPNSKRKNAANPAPRLRKQ 735
+K LG AT+V++P ++D + VQ G M++RVK N I + S + A P K
Sbjct: 807 IKRLGKLPATIVDIPQAENDYLTVQVGTMKMRVKLNEILSRVARSAKGGARTPTE--NKM 864
Query: 736 QEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIH 795
++ +S A + EE + VQTSKN+LDLRG RVEE+ +LD+ALA SVLF++H
Sbjct: 865 KQPARSSKAEAEPEEIKFDAAVQTSKNTLDLRGKRVEESLQELDLALAGRSRGSVLFIVH 924
Query: 796 GMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
GMGTG VKE VL LR HP VAK+EQES MN GCT+ YIK
Sbjct: 925 GMGTGAVKEAVLLRLRKHPYVAKFEQESVMNPGCTIVYIK 964
>gi|302758310|ref|XP_002962578.1| hypothetical protein SELMODRAFT_141299 [Selaginella moellendorffii]
gi|300169439|gb|EFJ36041.1| hypothetical protein SELMODRAFT_141299 [Selaginella moellendorffii]
Length = 825
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 356/844 (42%), Positives = 505/844 (59%), Gaps = 57/844 (6%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG A + + +P GK+ E+S+ L +QT+ A + + L +D+ ++ +A+SG+
Sbjct: 28 MGVAAARGSNLPVGKNREDSEGLQDQTADAHKLAGT--LRFLGAKDVTKVVEAAISGEFC 85
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRY--SPLLELLKNCNFLTELEEKIGF 118
E+C+V+ TL + +L A G L+R SPL +++ +EL E I
Sbjct: 86 HVGELCSVKDTLECARRLHDQLF-AKGGGGLELERLELSPLQRIMQGLELCSELREDIDK 144
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
C+D K I+LDRAS L +R +R+ NM L+SLLK+ A + AGGID IT RR+R+
Sbjct: 145 CLDSKREIVLDRASTKLSQVRRQRQANMTELESLLKETARMVIDAGGIDSMTITTRRARL 204
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
CV ++ASHK+LLP G+ L+ S++GAT FMEP+ A+ NN+E++LS +E AEE AI L
Sbjct: 205 CVAVRASHKFLLPGGVVLDSSNTGATLFMEPEPALRLNNLEIQLSAAERAEEVAICRRLA 264
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKH 297
+ +A S I ++ + +DLA ARA A+W+ V P S+S + IE I+H
Sbjct: 265 SRVAASAASILEQLNAITLVDLACARAKHAKWLGAVKPAFFESKSE---SKGVIIEEIRH 321
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS--DFPVPIDIKVECETRVVV 355
PLLL ++L KG+ +FPVPIDIKV ++V+
Sbjct: 322 PLLLETALE---------------------------KGLDRDNFPVPIDIKVRDGVKIVI 354
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
I+GPNTGGKT ++KTLG+AS+M+KAGLYLPA +PRLPWFD I AD+GD QSLEQNLSTF
Sbjct: 355 ISGPNTGGKTVALKTLGIASIMAKAGLYLPASGNPRLPWFDRIFADVGDSQSLEQNLSTF 414
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
SGH+ R+ I E +SLVLIDEIG GTDP+EG +LAT++L+Y V L +VTTH A
Sbjct: 415 SGHMRRLCKITEASGPQSLVLIDEIGGGTDPAEGSSLATAVLKYFAKTVHLCIVTTHSAS 474
Query: 476 LSCL--KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
L L D+D FENA+ EF LETLRPTYR+LWG G SNALNIAKS+ FD I+ RA
Sbjct: 475 LKTLPIHDQDLPFENASVEFDLETLRPTYRVLWGLPGQSNALNIAKSLQFDSDILSRASY 534
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
+ +L P + R+S+L LM++ + E A TAA ++I L+ EI E DLD+R
Sbjct: 535 WLTKLTPSGLKSRQSDLMLQLMKQSEEEEDHACTAAVYLSDIETLHNEIAFEVDDLDKRK 594
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
K +E + + + AK +++ V+ ++ L + S ++ ++ +I IV +
Sbjct: 595 IAAKRQELASMSKHVTEAKNKMEAVISRYKEGLSNNSGGGKAFTLRTAQDSITTIVNDY- 653
Query: 654 PDDDFSVSETNTSSF--TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
F + ++S+ P GE+V ++ LG K ATV+E D ++VQ G M++RVK
Sbjct: 654 --GAFFKEQNPSNSYLPLPGVGERVIIRRLGKKPATVLEPADDSGHLMVQLGTMKMRVKT 711
Query: 712 NNIR-PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
+ S K A PAP L + S E +GP +QTSKN++DLRGM
Sbjct: 712 TELMLTAQGSPVKQAKKPAPFLPE-----------SGTTELKFGPAIQTSKNTVDLRGMT 760
Query: 771 VEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
VE+A + + +A E SVLF+IHG+GTG +K+ V+ ILR HP VAK+E ES +N GCT
Sbjct: 761 VEDAIQVVRMVIAEREPGSVLFIIHGVGTGALKQAVISILRKHPNVAKFEDESFVNGGCT 820
Query: 831 VAYI 834
VAY+
Sbjct: 821 VAYV 824
>gi|302824584|ref|XP_002993934.1| hypothetical protein SELMODRAFT_236869 [Selaginella moellendorffii]
gi|300138206|gb|EFJ04981.1| hypothetical protein SELMODRAFT_236869 [Selaginella moellendorffii]
Length = 825
Score = 613 bits (1581), Expect = e-172, Method: Compositional matrix adjust.
Identities = 355/844 (42%), Positives = 506/844 (59%), Gaps = 57/844 (6%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG A + + +P GK+ E+S+ L +QT+ A + + L +D+ ++ +A+SG+
Sbjct: 28 MGVAAARGSNLPVGKNREDSEGLQDQTADAHKLAGT--LRFLGAKDVTKVVEAAISGEFC 85
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRY--SPLLELLKNCNFLTELEEKIGF 118
+ E+C+V+ TL + +L A G L+R SPL +++ +EL E I
Sbjct: 86 NVGELCSVKDTLECARRLHDQLF-AKGGGGLELERLELSPLQRIMQGLELCSELREDIDK 144
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
C+D K I+LDRAS L +R +R+ NM LD LLK+ A + AGGID IT RR+R+
Sbjct: 145 CLDSKREIVLDRASTKLSQVRRQRQANMTELDILLKETARMVIDAGGIDSMTITTRRARL 204
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
CV ++ASHK+LLP G+ L+ S++GAT FMEP+ A+ NN+E++LS +E AEE AI L
Sbjct: 205 CVAVRASHKFLLPGGVVLDSSNTGATLFMEPEPALRLNNLEIQLSAAERAEEVAICRRLA 264
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKH 297
+ +A S I ++ ++ +DLA ARA A+W+ V P S+S + IE I+H
Sbjct: 265 SRVAASAASILEQLNAIMLLDLACARAKHAKWLGAVKPAFFESKSE---SKGVIIEEIRH 321
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS--DFPVPIDIKVECETRVVV 355
PLLL ++L KG+ +FPVPIDIKV ++V+
Sbjct: 322 PLLLETALE---------------------------KGLDRDNFPVPIDIKVRDGVKIVI 354
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
I+GPNTGGKT ++KTLG+AS+M+KAGLYLPA +PRLPWFD I AD+GD QSLEQNLSTF
Sbjct: 355 ISGPNTGGKTVALKTLGIASIMAKAGLYLPASGNPRLPWFDRIFADVGDSQSLEQNLSTF 414
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
SGH+ R+ I E +SLVLIDEIG GTDP+EG +LAT++L+Y V L +VTTH A
Sbjct: 415 SGHMRRLCKITEASGPQSLVLIDEIGGGTDPAEGSSLATAVLKYFAKTVHLCIVTTHSAS 474
Query: 476 LSCL--KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
L L D+D FENA+ EF LETLRPTYR+LWG G SNA+NIAKS+ FD I+ RA
Sbjct: 475 LKTLPIHDQDLPFENASVEFDLETLRPTYRVLWGLPGQSNAVNIAKSLQFDSDILSRASY 534
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
+ +L P + R+S+L LM++ + E A TAA ++I L+ EI E DLD+R
Sbjct: 535 WLTKLTPSGLKSRQSDLMLQLMKQSEEEEDHACTAAVYLSDIETLHNEIAFEVDDLDKRK 594
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
K +E + + + AK +++ V+ ++ L + S ++ ++ +I IV +
Sbjct: 595 IAAKRQELASMSKHVTEAKNKMEAVISRYKEGLSNNSGGGKAFTLRTAQDSITTIVNDY- 653
Query: 654 PDDDFSVSETNTSSF--TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
F + ++S+ P GE+V ++ LG K ATV+E D ++VQ G M++RVK
Sbjct: 654 --GAFFKEQNPSNSYLPLPGVGERVIIRRLGKKPATVLEPADDSGHLMVQLGTMKMRVKT 711
Query: 712 NNIR-PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
+ S K A PAP L + S E +GP +QTSKN++DLRGM
Sbjct: 712 TELMLTAQGSPVKQAKKPAPFLPE-----------SGTTELKFGPAIQTSKNTVDLRGMT 760
Query: 771 VEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
VE+A + + +A E SVLF+IHG+GTG +K+ V+ ILR HP VAK+E ES +N GCT
Sbjct: 761 VEDAIQVVRMVIAEREPGSVLFIIHGVGTGALKQAVISILRKHPNVAKFEDESFVNGGCT 820
Query: 831 VAYI 834
VAY+
Sbjct: 821 VAYV 824
>gi|440751890|ref|ZP_20931093.1| mutS2 family protein [Microcystis aeruginosa TAIHU98]
gi|440176383|gb|ELP55656.1| mutS2 family protein [Microcystis aeruginosa TAIHU98]
Length = 789
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 294/838 (35%), Positives = 444/838 (52%), Gaps = 96/838 (11%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSLEQ+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLEQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
Q + L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578
Query: 603 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
++Q+ L AK +I+ V++ + RDA +++ + AI E P
Sbjct: 579 EIQKALLSAKAEINDVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK---- 625
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+E ++ PQ GE+V + +LG + A V+ + + D + +++G M++ + + I +
Sbjct: 626 -TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDG 683
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
K + A PA L + Q P ++TS N++D+RG RV E+ ++
Sbjct: 684 QKVETAPKPAKNLPQTPTKPQE------------TPLIRTSNNTVDIRGSRVAESETDIE 731
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
A+ +L++IHG GTG +++ V + L HP+V ++ Q +P N G T+AY+
Sbjct: 732 QAIIRATQSGILWIIHGKGTGKLRQGVHDFLSRHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|425460157|ref|ZP_18839639.1| MutS2 protein [Microcystis aeruginosa PCC 9808]
gi|389827152|emb|CCI21729.1| MutS2 protein [Microcystis aeruginosa PCC 9808]
Length = 789
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 293/838 (34%), Positives = 444/838 (52%), Gaps = 96/838 (11%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KAS K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KASQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQITPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
Q + L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578
Query: 603 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
++Q+ L AK +I+ V++ + RDA +++ + AI E P
Sbjct: 579 EIQKALLSAKAEINDVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK---- 625
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+E ++ PQ GE+V + +LG + A V+ + + D + +++G M++ + + I +
Sbjct: 626 -TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDG 683
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
K + A PA L + Q P ++T+ N++D+RG RV E+ ++
Sbjct: 684 QKVETAPKPAKNLPQTPTKPQE------------TPLIRTANNTVDIRGSRVAESETDIE 731
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
A+ +L++IHG GTG +++ V + L HP+V ++ Q +P N G T+AY+
Sbjct: 732 QAIVRATPSGILWIIHGKGTGKLRQGVHDFLSRHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|166365089|ref|YP_001657362.1| recombination and DNA strand exchange inhibitor protein
[Microcystis aeruginosa NIES-843]
gi|166087462|dbj|BAG02170.1| DNA mismatch repair protein [Microcystis aeruginosa NIES-843]
Length = 789
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 292/838 (34%), Positives = 444/838 (52%), Gaps = 96/838 (11%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSDRWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNTIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDHVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
Q + L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578
Query: 603 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
++Q+ L AK +I+ V++ + RDA +++ + AI E P
Sbjct: 579 EIQKALLSAKAEINEVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK---- 625
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+E ++ PQ GE+V + +LG + A V+ + + D + +++G M++ + + I +
Sbjct: 626 -TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDG 683
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
K + A PA L + Q P ++T+ N++D+RG RV E+ ++
Sbjct: 684 QKVETAPKPAKNLPQTPTKPQE------------TPLIRTANNTVDIRGSRVAESETDIE 731
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
A+ +L++IHG GTG +++ V + L HP+V ++ Q +P N G T+AY+
Sbjct: 732 QAITRATPSGILWIIHGKGTGKLRQGVHDFLSRHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|422303606|ref|ZP_16390957.1| MutS2 protein [Microcystis aeruginosa PCC 9806]
gi|389791362|emb|CCI12788.1| MutS2 protein [Microcystis aeruginosa PCC 9806]
Length = 789
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 290/834 (34%), Positives = 444/834 (53%), Gaps = 88/834 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
DRAS L IR + K E + L+ + + Q G I + +IT+R R + +KA+
Sbjct: 145 S-DRASPQLREIRGQMKVIKERIYRKLQDIMQK--QGGAIQEAVITQRSDRWVIPVKAAQ 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA++
Sbjct: 202 KEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNTIAEAFE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 261 DLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWWQ--- 312
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K + E+ VPI++++ E RVV ITGPNTGGKT
Sbjct: 313 ------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTGGKTV 347
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGLA++M+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RIV IL
Sbjct: 348 TLKTLGLAAVMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRIL 407
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +D+RF
Sbjct: 408 AALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYRDSRF 467
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF TL PTYR+LWG G SNAL IA+ +G + +I+ A+ + L E Q
Sbjct: 468 ENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLNPEIVTEARNHLGGLSEEINQ-- 525
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q++Q+
Sbjct: 526 ---VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQEIQK 582
Query: 607 ELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
L AK +I+ V++ + RDA +++ + AI E P +E
Sbjct: 583 ALLSAKAEINEVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK-----TEK 628
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
++ PQ GE+V + +LG + A V+ + + D + +++G M++ + + I + K +
Sbjct: 629 TKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDGQKVE 687
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALA 783
A PA L + Q P ++T+ N++D+RG RV E+ ++ A+
Sbjct: 688 TAPKPAKNLPQTPTKPQE------------TPLIRTANNTVDIRGSRVAESETDIEQAIV 735
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
+L++IHG GTG +++ V + L HP+V ++ Q +P N G T+AY+
Sbjct: 736 RATPSGILWIIHGKGTGKLRQGVHDFLSRHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|425465434|ref|ZP_18844743.1| MutS2 protein [Microcystis aeruginosa PCC 9809]
gi|389832333|emb|CCI24146.1| MutS2 protein [Microcystis aeruginosa PCC 9809]
Length = 789
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 290/834 (34%), Positives = 443/834 (53%), Gaps = 88/834 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
DRAS L IR + K E + L+ + + Q G I + +IT+R R + +KA+
Sbjct: 145 S-DRASPQLREIRGQMKVIKERIYRKLQDIMQK--QGGAIQEAVITQRSDRWVIPVKAAQ 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA++
Sbjct: 202 KEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNTIAEAFE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 261 DLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWWQ--- 312
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K + E+ VPI++++ E RVV ITGPNTGGKT
Sbjct: 313 ------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTGGKTV 347
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RIV IL
Sbjct: 348 TLKTLGLAALMAKAGLFIPAREPVEIPWFDHVLADIGDEQSLQQSLSTFSGHIRRIVRIL 407
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +D+RF
Sbjct: 408 AALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYRDSRF 467
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E Q
Sbjct: 468 ENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEINQ-- 525
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q++Q+
Sbjct: 526 ---VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQEIQK 582
Query: 607 ELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
L AK +I+ V++ + RDA +++ + AI E P +E
Sbjct: 583 ALLSAKAEINEVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK-----TEK 628
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
++ PQ GE+V + +LG + A V+ + + D + +++G M++ + + I + K +
Sbjct: 629 TKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDGQKVE 687
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALA 783
A PA L + Q P ++T+ N++D+RG RV E+ ++ A+
Sbjct: 688 TAPKPAKNLPQTPTKPQE------------TPLIRTANNTVDIRGSRVAESETDIEQAIT 735
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
+L++IHG GTG +++ V + L HP++ ++ Q +P N G T+AY+
Sbjct: 736 RATPSGILWIIHGKGTGKLRQGVHDFLSRHPQIKRF-QLAPQNEGGSGVTIAYL 788
>gi|425450195|ref|ZP_18830027.1| MutS2 protein [Microcystis aeruginosa PCC 7941]
gi|389769051|emb|CCI05979.1| MutS2 protein [Microcystis aeruginosa PCC 7941]
Length = 789
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 291/838 (34%), Positives = 444/838 (52%), Gaps = 96/838 (11%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSDRWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ +PI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------IPINVQISPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
Q + L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578
Query: 603 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
++Q+ L AK +I+ V++ + RDA +++ + AI E P
Sbjct: 579 EIQKALLSAKAEINDVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK---- 625
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+E ++ PQ GE+V + +LG + A V+ + + D + +++G M++ + + I +
Sbjct: 626 -TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDG 683
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
K + A PA L + Q P ++T+ N++D+RG RV E+ ++
Sbjct: 684 QKVETAPKPAKNLPQTPTKPQE------------TPLIRTANNTVDIRGSRVAESETDIE 731
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
A+ +L++IHG GTG +++ V + L HP+V ++ Q +P N G T+AY+
Sbjct: 732 QAIIRATPSGILWIIHGKGTGKLRQGVHDFLSRHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|425446466|ref|ZP_18826469.1| MutS2 protein [Microcystis aeruginosa PCC 9443]
gi|389733282|emb|CCI02921.1| MutS2 protein [Microcystis aeruginosa PCC 9443]
Length = 789
Score = 434 bits (1115), Expect = e-118, Method: Compositional matrix adjust.
Identities = 289/835 (34%), Positives = 443/835 (53%), Gaps = 90/835 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSDRWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQITPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
Q + L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
++Q+ L AK +I+ V++ + S + +++ + AI E P +E
Sbjct: 579 EIQKALLSAKAEINDVIRRLQ------SGTKTGRDAQKATEELTAIAERLLPK-----TE 627
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
++ PQ GE+V + +LG + A V+ + + + + +++G M++ + + I + K
Sbjct: 628 KTKVNYRPQVGERVRLPNLG-QTAEVLAISPESEEISLRFGMMKMTLPLDQIESLDGQKV 686
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
+ A PA L + Q P ++T+ N++D+RG RV E+ ++ A+
Sbjct: 687 ETAPKPAKNLPQTPTKPQE------------TPLIRTANNTVDIRGSRVAESETDIEQAI 734
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
+L++IHG GTG +++ V + L HP+V ++ Q +P N G T+AY+
Sbjct: 735 VRATPSGILWIIHGKGTGKLRQGVHDFLSRHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|443646823|ref|ZP_21129501.1| mutS2 family protein [Microcystis aeruginosa DIANCHI905]
gi|159028850|emb|CAO90655.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335652|gb|ELS50116.1| mutS2 family protein [Microcystis aeruginosa DIANCHI905]
Length = 789
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 290/834 (34%), Positives = 444/834 (53%), Gaps = 88/834 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
DRAS L IR + K E + L+ + + Q G I + +IT+R R + +KA+
Sbjct: 145 S-DRASPQLREIRGQIKVIKERIYRKLQDIMQK--QGGAIQEAVITQRSERWVIPVKAAQ 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA++
Sbjct: 202 KEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNLIAEAFE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 261 DLEYLLAIATRLDLATARARYSLWLEGNPP-----RFIDGSETITLRNLRHPLLWWQ--- 312
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K + E+ +PI++++ E RVV ITGPNTGGKT
Sbjct: 313 ------------KHHEQGGEV-------------IPINVQITPEIRVVAITGPNTGGKTV 347
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RIV IL
Sbjct: 348 TLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRIVRIL 407
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +D+RF
Sbjct: 408 AALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYQDSRF 467
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF TL PTYR+LWG G SNAL IA+ +G + +I+ A+ + L E Q
Sbjct: 468 ENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLNPEIVAEARNHLGGLSEEINQ-- 525
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q++Q+
Sbjct: 526 ---VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQEIQK 582
Query: 607 ELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
L AK +I+ V++ + RDA +++ + AI E P +E
Sbjct: 583 ALLSAKAEINDVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK-----TEK 628
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
++ PQ GE+V + +LG + A V+ + + D + +++G M++ + + I + K +
Sbjct: 629 TKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDGQKVE 687
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALA 783
A PA L + Q P ++T+ N++D+RG RV E+ ++ A+
Sbjct: 688 TAPKPAKNLPQTPTKPQE------------TPLIRTANNTVDIRGSRVAESETDIEQAIV 735
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
+L++IHG GTG +++ V + L HP+V ++ Q +P N G T+AY+
Sbjct: 736 RATPSGILWIIHGKGTGKLRQGVHDFLSRHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|425456967|ref|ZP_18836673.1| MutS2 protein [Microcystis aeruginosa PCC 9807]
gi|389801826|emb|CCI19076.1| MutS2 protein [Microcystis aeruginosa PCC 9807]
Length = 789
Score = 433 bits (1113), Expect = e-118, Method: Compositional matrix adjust.
Identities = 289/835 (34%), Positives = 443/835 (53%), Gaps = 90/835 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRQEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQITPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILGALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
Q + L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
++Q+ L AK +I+ V++ + S + +++ + AI E P +E
Sbjct: 579 EIQKALLSAKAEINDVIRRLQ------SGTKTGRDAQKATEELTAIAERLLPK-----TE 627
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
++ PQ GE+V + +LG + A V+ + + + + +++G M++ + + I + K
Sbjct: 628 KTKVNYRPQVGERVRLPNLG-QTAEVLAISPESEEISLRFGMMKMTLPLDQIESLDGQKV 686
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
+ A PA L + Q P ++T+ N++D+RG RV E+ ++ A+
Sbjct: 687 ETAPKPAKNLPQTPTKPQE------------TPLIRTANNTVDIRGSRVAESETDIEQAI 734
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
+L++IHG GTG +++ V + L HP+V ++ Q +P N G T+AY+
Sbjct: 735 VRATPSGILWIIHGKGTGKLRQGVHDFLSRHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|425469689|ref|ZP_18848604.1| MutS2 protein [Microcystis aeruginosa PCC 9701]
gi|389880428|emb|CCI38809.1| MutS2 protein [Microcystis aeruginosa PCC 9701]
Length = 789
Score = 432 bits (1112), Expect = e-118, Method: Compositional matrix adjust.
Identities = 290/838 (34%), Positives = 444/838 (52%), Gaps = 96/838 (11%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP ++ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIIDQGNQLRQYRRLEQIEEEKILRQLSNTIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ +PI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------IPINVQITPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
Q + L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578
Query: 603 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
++Q+ L AK +I+ V++ + RDA +++ + AI E P
Sbjct: 579 EIQKALLSAKAEINEVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK---- 625
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+E ++ PQ GE+V + +LG + A V+ + + + + +++G M++ + + I +
Sbjct: 626 -TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPESEEISLRFGMMKMTLPLDQIESLDG 683
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
K + PA L + Q P ++TS N++D+RG RV E+ ++
Sbjct: 684 QKVETVPKPAKNLPQTPTKPQE------------TPLIRTSNNTVDIRGSRVAESETDIE 731
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
A+ S +L++IHG GTG +++ V + L HP+V ++ Q +P N G T+AY+
Sbjct: 732 QAIVRATSSGILWIIHGKGTGKLRQGVHDFLSRHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|425434478|ref|ZP_18814947.1| MutS2 protein [Microcystis aeruginosa PCC 9432]
gi|389676022|emb|CCH94894.1| MutS2 protein [Microcystis aeruginosa PCC 9432]
Length = 789
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 287/835 (34%), Positives = 442/835 (52%), Gaps = 90/835 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGISDIGDALERGHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KAS K +P GI + SS+GAT+++EP ++ N + E EE IL L+ IA
Sbjct: 198 KASQKEQIP-GIIHDTSSTGATFYIEPHSIIDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ +PI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------IPINVQISPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSAEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
Q + L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAKEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
++Q+ L AK +I+ V++ + + + +++ + AI E P +E
Sbjct: 579 EIQKALLSAKAEINEVIRRLQ------AGTKTGKDAQKATEELTAIAERLLPK-----TE 627
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
++ PQ GE+V + +LG + A V+ + + D + +++G M++ + + I + K
Sbjct: 628 KTKVNYRPQVGERVRLPNLG-QTAEVLAISPESDEISLRFGMMKMTLPLDQIESLDGQKV 686
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
+ A PA L + Q P ++T+ N++D+RG RV E+ ++ A+
Sbjct: 687 ETAPKPAKNLPQTPTKPQE------------TPLIRTANNTVDIRGSRVAESETDIEQAI 734
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
+L++IHG GTG +++ V + L HP+V ++ Q +P N G T+AY+
Sbjct: 735 IRATPSGILWIIHGKGTGKLRQGVHDFLSRHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|390440129|ref|ZP_10228481.1| MutS2 protein [Microcystis sp. T1-4]
gi|389836495|emb|CCI32605.1| MutS2 protein [Microcystis sp. T1-4]
Length = 789
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 289/835 (34%), Positives = 445/835 (53%), Gaps = 90/835 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSERWVLPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQISPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYQ 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G + +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLNPEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
Q + L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
++Q+ L AK +I+ V++ + + + +++ + AI E P +E
Sbjct: 579 EIQKALLSAKAEINEVIRRLQ------AGTKTGKDAQKATEELTAIAERLLPK-----TE 627
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
++ PQ GE+V + +LG + A V+ + + + + +++G M++ + + I + K
Sbjct: 628 KTKVNYRPQVGERVRLPNLG-QTAEVLAISPESEEISLRFGMMKMTLPLDQIESLDGQKV 686
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
+ A PA L + Q P ++T+ N++D+RG RV E+ ++ A+
Sbjct: 687 ETAPKPAKNLPQTPTKPQE------------TPLIRTANNTVDIRGSRVAESETDIEQAI 734
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
S +L++IHG GTG +++ V + L HP+V ++ Q +P N G T+AY+
Sbjct: 735 IRATSSGILWIIHGKGTGKLRQGVHDFLSRHPQVKRF-QLAPQNEGGSGVTIAYL 788
>gi|158336591|ref|YP_001517765.1| recombination and DNA strand exchange inhibitor protein
[Acaryochloris marina MBIC11017]
gi|158306832|gb|ABW28449.1| MutS2 family protein [Acaryochloris marina MBIC11017]
Length = 794
Score = 432 bits (1111), Expect = e-118, Method: Compositional matrix adjust.
Identities = 284/832 (34%), Positives = 458/832 (55%), Gaps = 82/832 (9%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQ---LLSPSEIC 66
++P ++E S+ LL QT + ++Q L T E I I + V Q +L E+
Sbjct: 34 ELPIPDTVEASETLLQQTQEVYDL-ETQLLTALTFEGIHDIRAALVRSQRQGILRGEELL 92
Query: 67 AVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
V TL N+ + + EL + L +L+ + ELE++I CID + +
Sbjct: 93 QVATTLLGSRNLRRLINRYPEL--------TSLNQLVADLRTYPELEQEIRHCIDEQGEV 144
Query: 127 ILDRASEDLELIRAERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
DRASE L IR ER+R + N + ++L+++ + + + + LIT+R +R V +KA
Sbjct: 145 A-DRASEKLMGIR-ERQRQVRNDVQTILQRILQR--KGAALQERLITQRSNRFVVPVKAP 200
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
K +P GI + S+SGAT ++EPK VE NN +L+ E AE AI LT ++A+
Sbjct: 201 QKDAVP-GIVHDASTSGATLYIEPKATVELNNRLRQLTRQEQAEAEAIRQALTEKVAEVH 259
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
++ L+ V +DLA ARA ++ W++ P +++ ++ + ++HPLL+
Sbjct: 260 EDLDALLQIVTLVDLATARARYSYWLEANRPRFVNRAA----DTLTLRRLRHPLLVWQ-- 313
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+ + E+ V ID+ ++ + RVV ITGPNTGGKT
Sbjct: 314 -------------QQHEQGPEV-------------VAIDVTIQPQIRVVAITGPNTGGKT 347
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KTLGLA+LM+K GL++PA+ LPWFD +LADIGD QSL+Q+LSTFSGHI RI +I
Sbjct: 348 VTLKTLGLATLMAKVGLFVPAQEPVELPWFDQVLADIGDEQSLQQSLSTFSGHIRRIQEI 407
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+ ++ +SLVL+DE+G+GTDP EG ALA ++L+YL D+ L + TTH+ +L LK D R
Sbjct: 408 IAALTDQSLVLLDEVGAGTDPLEGSALAIALLRYLADQAQLTIATTHFGELKALKYTDNR 467
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
FENA+ EF TL+PTYR+LWG G SNAL IA+ +G + ++I +AQ + + +
Sbjct: 468 FENASVEFDDATLQPTYRLLWGIPGRSNALIIAQRLGLNEQVIAQAQAQM-----DGETD 522
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
+++ L ERR+ E++A+ AA L L+ ++ +A DL R L+ ++ + +Q
Sbjct: 523 DVNQVIAGLETERRQQETKAQAAAQLLQSTEQLHEQVAKKASDLKVREQKLRQQQEKAIQ 582
Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINS--LIKESESAIAAIVEAHRPDDDFSVSET 663
+E+ AK I V++D + Q + A A ++ + L K + + + + P
Sbjct: 583 EEIRRAKQAIAQVIRDLQQQPKSAPAAQVATERLEKIANQRLPSRTKPKAPP-------- 634
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
F PQ G++V + S+G K + P ++ ++V++G M++ VK I + K
Sbjct: 635 -PKGFQPQVGDRVRIPSIGQKADVIKITPTNE--LVVKFGMMKMTVKPTEIESLTGEK-- 689
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALA 783
P P+ S N + P V+TSKN+LD+RG RV +A ++ A+A
Sbjct: 690 --VAPPPK------KTDSAPKKGDNTPKNSAPMVRTSKNTLDIRGSRVADAEVVIEDAIA 741
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAY 833
+++ L++IHG GTG +++ V L HP V++YE +++ G T+AY
Sbjct: 742 --KAQGPLWIIHGHGTGKLRQGVQAYLSQHPLVSRYEFAEQADGGKGVTIAY 791
>gi|359461621|ref|ZP_09250184.1| recombination and DNA strand exchange inhibitor protein
[Acaryochloris sp. CCMEE 5410]
Length = 794
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 287/830 (34%), Positives = 457/830 (55%), Gaps = 78/830 (9%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQ---LLSPSEIC 66
++P ++E S+ LL QT + ++Q L T E I I + V Q +LS E+
Sbjct: 34 ELPIPTTVEGSETLLQQTQEVYDL-ETQLLTALTFEGIHDIRAALVRSQRQGILSGEELL 92
Query: 67 AVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
V TL N+ + + EL L +L+ + ELE++I CID + +
Sbjct: 93 QVATTLLGSRNLRRLINRYPEL--------VSLNQLVADLRTYPELEQEIRHCIDEQGEV 144
Query: 127 ILDRASEDLELIRAERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
DRASE L +IR ER+R + N + ++L+++ + + + + LIT+R R V +KA
Sbjct: 145 A-DRASEKLMVIR-ERQRQVRNDVQTILQRILQR--KGAALQERLITQRSDRFVVPVKAP 200
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
K +P GI + S+SGAT ++EPK VE NN +L+ E AE AI LT ++A+ +
Sbjct: 201 QKDAVP-GIVHDASTSGATLYIEPKATVELNNRLRQLTRQEQAEAEAIRQALTEKVAEVQ 259
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
++ L+ V +DLA ARA ++ W+ P +++ ++ + ++HPLL+
Sbjct: 260 EDLDALLQIVTAVDLATARARYSYWLGANRPQFVNRAA----ETLTLRRLRHPLLVWQ-- 313
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+ + E+ V ID+ ++ E RVV ITGPNTGGKT
Sbjct: 314 -------------QHHEQGPEV-------------VAIDVTIQPEIRVVAITGPNTGGKT 347
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KTLGLA+LM+K GL++PA+ LPWFD +LADIGD QSL+Q+LSTFSGHI RI +I
Sbjct: 348 VTLKTLGLATLMAKVGLFVPAQEPVELPWFDQVLADIGDEQSLQQSLSTFSGHIRRIQEI 407
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+ ++ +SLVL+DE+G+GTDP EG ALA ++L+YL D+ L + TTH+ +L LK D R
Sbjct: 408 IAALTDQSLVLLDEVGAGTDPLEGSALAIALLRYLADQAQLTIATTHFGELKALKYTDAR 467
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
FENA+ EF TL+PTYR+LWG G SNAL IA+ +G + ++I AQ L + + +
Sbjct: 468 FENASVEFDDATLQPTYRLLWGIPGRSNALIIAQRLGLNEQVI--AQALAQM---DGETD 522
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
+++ L ERR+ E++A+ AA L L++++ +A DL R L+ ++ + +Q
Sbjct: 523 DVNQVIAGLETERRQQETRAQAAAKLLQSTEQLHQQVAKKASDLKVREQKLRQQQEKAIQ 582
Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
+E+ AK I V++D + Q + A A ++ + E IA + R
Sbjct: 583 EEIRRAKQAIAQVIRDLQQQPKSAPAAQVAT---ERLEKIA----SQRLPSRTKPKAPPP 635
Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
+ F PQ G++V + S+G K + P ++ ++VQ+G M++ VK + + K
Sbjct: 636 TGFQPQVGDRVRIPSIGQKADVIKITPTNE--LVVQFGMMKMTVKPTEVESLTGEK---- 689
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACW 785
P P+ S N + V+TSKN+LD+RG RV +A ++ A+A
Sbjct: 690 VTPPPK------KTDSAPKKEDNTPNNSALMVRTSKNTLDIRGSRVADAEVVIEDAIA-- 741
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAY 833
+++ L++IHG GTG +++ V L HP V++YE +++ G T+AY
Sbjct: 742 KAQGPLWIIHGHGTGKLRQGVQTYLSQHPLVSRYEFAEQADGGKGVTIAY 791
>gi|425439812|ref|ZP_18820127.1| MutS2 protein [Microcystis aeruginosa PCC 9717]
gi|389719875|emb|CCH96352.1| MutS2 protein [Microcystis aeruginosa PCC 9717]
Length = 789
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 290/838 (34%), Positives = 444/838 (52%), Gaps = 96/838 (11%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+P +S EES LL QT ++ Q L I DI L A G LLS E+
Sbjct: 34 QLPLPESKEESLNLLCQTKEVYSLEQKLDSRLSFDGITDIGDALERAHLGGLLSGQELLN 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL V + + + E ++ P+L EL+ E+E++I CID I
Sbjct: 94 IATTLAGVRRLRRLIDEQEDI---------PVLKELVAEIRTYPEIEQEIHRCIDEDGRI 144
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L IR + R+R L +++K Q G I + +IT+R R + +
Sbjct: 145 S-DRASPQLREIRGQMKVIRERIYRKLQDIMQK------QGGAIQEAVITQRSDRWVIPV 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA+ K +P GI + SS+GAT+++EP V+ N + E EE IL L+ IA
Sbjct: 198 KAAQKEQIP-GIIHDTSSTGATFYIEPHSIVDQGNQLRQYRRLEQIEEEKILRQLSNLIA 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
++ +++YL+ +DLA ARA ++ W++G P + +I + ++HPLL
Sbjct: 257 EAFEDLEYLLAIATRLDLATARARYSLWLEGNPP-----HFIDGSETITLRNLRHPLLWW 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
K + E+ VPI++++ E RVV ITGPNTG
Sbjct: 312 Q---------------KHHEQGGEV-------------VPINVQITPEIRVVAITGPNTG 343
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGLA+LM+KAGL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI
Sbjct: 344 GKTVTLKTLGLAALMAKAGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRI 403
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V IL ++ SLVL+DE+G+GTDP+EG LA +ILQYL D L V TTHY +L LK +
Sbjct: 404 VRILAALNSRSLVLLDEVGAGTDPAEGSPLAIAILQYLADHSLLTVATTHYGELKALKYR 463
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ A+ + L E
Sbjct: 464 DSRFENASVEFDDRTLSPTYRLLWGIPGRSNALTIAQRLGLSPEIVAEARNHLGGLSEEI 523
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
Q + L +RR+ ES+A+ A+ L + Y E+ A L R LK + Q
Sbjct: 524 NQ-----VIAGLEAQRREQESKAQEASQLLQQTEKFYTEVSTRANSLQERERELKRYQEQ 578
Query: 603 QVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
++Q+ L AK +I+ V++ + RDA +++ + AI E P
Sbjct: 579 EIQKALLSAKAEINEVIRRLQAGTKTGRDA---------QKATEELTAIAERLLPK---- 625
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+E ++ PQ GE+V + +LG + A V+ + + + + +++G M++ + + I +
Sbjct: 626 -TEKTKVNYRPQVGERVRLPNLG-QTAEVLAISPESEEISLRFGMMKMTLPLDQIESLDG 683
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
K + A PA L + Q P ++T+ N++D+RG RV E+ ++
Sbjct: 684 QKVETAPKPAKNLPQTPTKPQE------------TPLIRTANNTVDIRGSRVAESETDIE 731
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
A+ +L++IHG GTG +++ V + L HP++ ++ Q +P N G T+AY+
Sbjct: 732 QAITRATPSGILWIIHGKGTGKLRQGVHDFLSRHPQIKRF-QLAPQNEGGSGVTIAYL 788
>gi|428776360|ref|YP_007168147.1| MutS2 family protein [Halothece sp. PCC 7418]
gi|428690639|gb|AFZ43933.1| MutS2 family protein [Halothece sp. PCC 7418]
Length = 812
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 284/849 (33%), Positives = 441/849 (51%), Gaps = 96/849 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P + E S LL +T A+ + + I D + L A +L + +
Sbjct: 35 LPIPDNRETSLTLLTETKEVYALEENLTSGWKFDGIYDFSSALERAEYKGILEGETLLQI 94
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
TL + + + + D L+ L EL+ ELE++I C+D K +
Sbjct: 95 ATTLAGMRRLRRVI--------DELEDSPRLKELISQIRTYPELEKEINRCLDDKGKVT- 145
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
+RAS L IR K + + L+ + Q Q+G I +P+IT+R R + +KA HK
Sbjct: 146 ERASPKLGEIRQNLKERRDRIYQKLQNIMQQ--QSGAIQEPVITQRGERFVLPVKAGHKE 203
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ GI + S SGAT ++EP VE N + + E EE IL LT E+A+ + ++
Sbjct: 204 SI-RGIVHDSSGSGATLYIEPNSIVELGNQQRQYLRQEKREEERILQALTEEVAEVKEDL 262
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ L+ ++DLA AR+ ++ W++ P + S S I + ++HPLL+
Sbjct: 263 ELLLAIATKLDLATARSRYSLWLEANPPQFVESNSR----EPITLRRLRHPLLV------ 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
P+ VPID++++ ETRVV ITGPNTGGKT +
Sbjct: 313 WQHHHEQGTPV----------------------VPIDVQIDPETRVVAITGPNTGGKTVT 350
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GLA+LM+K GL++PAK +PWF+ +LADIGD QS+EQ+LSTFSGHI RI I++
Sbjct: 351 LKTVGLAALMAKVGLFIPAKEPVEIPWFEQVLADIGDEQSIEQSLSTFSGHIRRITRIID 410
Query: 428 LVS------------------RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
+ + SLVL+DE+G+GTDP+EG A+A ++LQYL RV L +
Sbjct: 411 ALHPSSIDHPEANEDADGETIKLSLVLLDEVGAGTDPAEGSAIAIALLQYLAARVRLTIA 470
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L LK +D RFENA+ EF ETL PTYR+LWG G SNAL IA+ +G D +I+
Sbjct: 471 TTHYGELKALKYQDERFENASVEFDDETLSPTYRLLWGIPGRSNALTIARRLGLDPEILD 530
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
A+ + + Q + L ++RR+ E +AR A L + Y+E+ AK L
Sbjct: 531 LAKNKMGGYSEDINQ-----VISGLEKQRREQEEKAREARQLLEQAEKFYQEVSSRAKAL 585
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 649
+ R A LK + Q V + ++ A+ +I V++ + + A +++ + + I
Sbjct: 586 EAREADLKRSQEQAVNEAVSEARQEIAQVIKQLQQGQKTGQA------AQKATATVNEIA 639
Query: 650 EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
HRP + + + PQ GEQV + ++ V+ P + + +++G M++ V
Sbjct: 640 GRHRPQPE---TPKPKPQYQPQVGEQVRLPKF-NQTGEVLTAPNAEGKLTIRFGLMKMTV 695
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
+I + K P L ++Q Q S + + AS P V+T N+LD+RG
Sbjct: 696 SLADIESLDGKK--------PELPQKQ---QKASTSTPKKSASEAPTVRTESNTLDIRGY 744
Query: 770 RVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN--- 826
RV +A QL+ + ++R L+VIHG GTG +++ V E L+ HP+V +YE +P N
Sbjct: 745 RVAQAESQLENTIRS-QNRGALWVIHGKGTGKLRQGVQEFLKQHPQVERYET-APQNEGG 802
Query: 827 YGCTVAYIK 835
G TVAY+K
Sbjct: 803 SGVTVAYLK 811
>gi|434396858|ref|YP_007130862.1| MutS2 protein [Stanieria cyanosphaera PCC 7437]
gi|428267955|gb|AFZ33896.1| MutS2 protein [Stanieria cyanosphaera PCC 7437]
Length = 799
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 288/850 (33%), Positives = 456/850 (53%), Gaps = 92/850 (10%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLS----TIEDIAGILNSAVS 56
+G + Q+P K+ ES +LL QT ++ Q LD S IEDI L A
Sbjct: 27 LGTVAARGLQLPTTKT--ESLQLLAQTKEVYSL--EQQLDSSWSFKGIEDIGESLERAKI 82
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G LLS E+ + TL V + + + E L +L+ ELE++I
Sbjct: 83 GGLLSAQELLDLATTLAGVRRLRRTIDAKTE-------DLPTLTQLVTELRTYPELEQEI 135
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
CID + + DRA+ L IR++ KR + + +L+ + + Q G + + +IT+R
Sbjct: 136 HHCIDDRGEVT-DRANPKLAEIRSQIKRLRDKIYKILQNIVQK--QGGAVQEAVITQRDG 192
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R + +KA K +P GI ++SS+G+T ++EP V+ N + E EE A+L
Sbjct: 193 RFVIPVKAPQKDSIP-GIVHDISSTGSTLYVEPNAVVQLGNQLRQAERQEKREEEAVLRA 251
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
LT ++A + +++ L+ +DLA ARA ++ W+ P V+ ++ + ++
Sbjct: 252 LTEKVAAVQEDLEQLLAIATVLDLATARARYSWWLGANPPRFVD---VNQGETVTLRQLR 308
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLL+ + + +E+ VPID++++ + RVV I
Sbjct: 309 HPLLVWQ---------------QQHEQGTEV-------------VPIDVQIQPQIRVVAI 340
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT ++KT+GLA+LM+KAGL++PAK +PWF+ +LADIGD QSL+Q+LSTFS
Sbjct: 341 TGPNTGGKTVTLKTIGLAALMAKAGLFIPAKEPVEIPWFEQVLADIGDEQSLQQSLSTFS 400
Query: 417 GHISRIVDILELVS-RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
GHI RI I+E S ++SL+L DEIG+GTDP+EG ALA +IL+YL ++ L + TTHY +
Sbjct: 401 GHIRRISRIIETSSLQDSLILFDEIGAGTDPAEGSALAIAILKYLAEKALLTIATTHYGE 460
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L LK +D RFENA+ EF+ +TL+PTYR+LWG G SNAL IA +G +II+ AQ+
Sbjct: 461 LKALKYQDERFENASVEFNDQTLKPTYRLLWGIPGRSNALTIAHRLGLKSEIIEDAQQ-- 518
Query: 536 ERLRPERQQHRKSELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
R ++ L S +E ERR+ E++A+ A L + Y E+ +A L R
Sbjct: 519 ---RVGVSASQELNLVISALEAERREQENKAKEATKLLEQTERFYTEVSAKASSLQERER 575
Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFEN-----QLRDASADEINSLIKESESAIAAIV 649
LK + + VQQ + AK +I V++ + Q + +E+N + +E +A
Sbjct: 576 ELKISQEKAVQQAILAAKGEIAQVIRRLQQGEQTAQKAQKATEELNQI---AERELAKTK 632
Query: 650 EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
+ R + P+ GE++ + SLG + V+ + ++ + V++G M++ V
Sbjct: 633 QPKR----------TKPGYKPKVGERIKIPSLG-QTGEVLSIDEEEKQLTVRFGLMKMTV 681
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP-RVQTSKNSLDLRG 768
+ I + K + A ++ S+ + A+ P V+TSKN++DLRG
Sbjct: 682 AVDEIESLDGQKVETAVKA-----------KTASSTKTKPAAAKPPVAVRTSKNTIDLRG 730
Query: 769 MRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN-- 826
RV A L+ A+A VL++IHG GTG ++E + E L+ HP++ ++E +P N
Sbjct: 731 SRVANAEADLENAIASATESGVLWIIHGKGTGRLREGIHEFLKRHPQIERFEL-APQNEG 789
Query: 827 -YGCTVAYIK 835
G TV Y+K
Sbjct: 790 GSGVTVVYLK 799
>gi|427417145|ref|ZP_18907328.1| MutS2 family protein [Leptolyngbya sp. PCC 7375]
gi|425759858|gb|EKV00711.1| MutS2 family protein [Leptolyngbya sp. PCC 7375]
Length = 818
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 287/854 (33%), Positives = 446/854 (52%), Gaps = 82/854 (9%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
+G + +IP +S ES++LL QT A + + PL+ +ED+ L A +L
Sbjct: 27 LGALAARHGRIPEHQS--ESEQLLAQTREAYRLEEKSPLNFRGVEDMGDALERAKRQAIL 84
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
S E+ + TL + + + D + + L L+ ELE++I CI
Sbjct: 85 SGDELLHIATTLAGARQLRRTI------DAQEEEAFPVLQALVGQLRTYPELEKEIHHCI 138
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
D + + DRA+ L IR K + L + L+++ + +G + + LIT+R R +
Sbjct: 139 DDRGKVT-DRANPKLAGIRKNLKNTHDQLHAKLQRIMQR--HSGVLQETLITQRAGRFVI 195
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
+KA K +P GI +VS+SGAT ++EP+G VEF N +L E EE + LT +
Sbjct: 196 PVKAPQKESIP-GIVHDVSTSGATLYIEPQGVVEFGNRLRQLERQETREEELVRQRLTEQ 254
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
+A +++ LM V +DLA ARA ++ W++ P S + + + ++HP+L
Sbjct: 255 VAAVSEDLEQLMAIVTTLDLATARARYSLWLEANPPRFSEANERTV-----LRQLRHPIL 309
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+ P TV VP DI + + RVV ITGPN
Sbjct: 310 VWQQ-------RHEEGP----------TV-----------VPTDITMRPDIRVVAITGPN 341
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT ++KTLGLA+LM+K GL++PA+ LPWFD +LADIGD QS+EQ+LSTFSGHI
Sbjct: 342 TGGKTVTLKTLGLAALMAKVGLFVPAREPVELPWFDQVLADIGDEQSIEQSLSTFSGHIR 401
Query: 421 RIVDILELVSRE------------------SLVLIDEIGSGTDPSEGVALATSILQYLRD 462
RI IL+ + + SLVL+DE+G+GTDP+EG ALA S+LQ+L +
Sbjct: 402 RIGRILDAIGADGVDDAGNTASMGTAHPTNSLVLLDEVGAGTDPTEGSALAISLLQHLAN 461
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
L V TTH+ +L LK +D RFENA+ EF +L PTYR+LWG G SNAL IA+ +G
Sbjct: 462 HTRLTVATTHFGELKALKYQDERFENASVEFDDVSLSPTYRLLWGIPGRSNALTIARRLG 521
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
+ +I AQ V +Q +++ L +R++ E QA+ AA + A+ L +I
Sbjct: 522 LNPNVIDTAQTYVG----VSKQDDVNQVIAGLEAQRKRQEDQAKQAAGIVAQAEALKTDI 577
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
E +A + K ++ + +Q + AK +I TV++ + A A + + + E
Sbjct: 578 ERKAAAIKEWERSQKLEQEKAIQAAVAEAKAEIATVIRQLQKGNPTAQAAQRATELVEDI 637
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
+ + + + P ++ + + P+ GE+V + LG + A VV P D V V++
Sbjct: 638 AQQQQVPKGNHP------AKKVITDYKPKLGEKVRLIGLGGQTAEVVGEPDSDGKVAVRF 691
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G M+ V ++I + K A P K E R++ + E + P V+TSKN
Sbjct: 692 GLMKTIVDLSDIESLTGQK---TATSKPAAEKAPEKRRTTVKVAKKEPEA--PAVRTSKN 746
Query: 763 SLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE-- 820
++DLRGMRV EA L+ +A +S +++IHG GTG +K V E L+ HP+V ++
Sbjct: 747 TIDLRGMRVAEAEADLENFIA--KSTGPIWIIHGHGTGKLKRGVREFLKRHPQVRSFDNA 804
Query: 821 QESPMNYGCTVAYI 834
+++ G TVA +
Sbjct: 805 EQADGGTGVTVAQV 818
>gi|428223909|ref|YP_007108006.1| MutS2 family protein [Geitlerinema sp. PCC 7407]
gi|427983810|gb|AFY64954.1| MutS2 family protein [Geitlerinema sp. PCC 7407]
Length = 791
Score = 421 bits (1082), Expect = e-115, Method: Compositional matrix adjust.
Identities = 286/824 (34%), Positives = 443/824 (53%), Gaps = 78/824 (9%)
Query: 16 SLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
SLEESQ+LL QT L Q+ L I DI L A +LS E+ A+ TL
Sbjct: 40 SLEESQRLLAQTEEVYRLESRQTSGLPFDGIMDIGPSLERAERQGVLSGEELLAIATTLA 99
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
N+ + + + A++ P+L EL+ E+E+ I FCID + + +DRAS
Sbjct: 100 GARNLRRVIDDQADM---------PVLTELVSELRTYPEIEQSIHFCIDDRGEV-MDRAS 149
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
L IR +++ E + L ++ + QA + + +IT+R R + +KASHK +P
Sbjct: 150 PKLAEIREKQRSQREEVRQTLFRIMQRQSQA--MQESVITQRGDRFVIPVKASHKDAIP- 206
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S+SGAT ++EP VE NN +L E AEE IL LTAEIA+ ++ L+
Sbjct: 207 GIVHDTSTSGATLYVEPHTVVERNNRLRQLQRQEQAEEAVILGRLTAEIAEVLPTLERLL 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
V +DLA ARA ++ W+ G P ++ + + ++HPLL+ +A
Sbjct: 267 AIVTTLDLAAARARYSFWLGGNVPRFVQRT---AGEVVTLRSLRHPLLVWQQQHEQGSAV 323
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
VPID+ ++ + RVV ITGPNTGGKT ++KTLG
Sbjct: 324 ----------------------------VPIDLMIQPQLRVVAITGPNTGGKTVTLKTLG 355
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
LA+LM+KAGLY+ A+ +PWFD ILADIGD QSL+Q+LSTFSGHI RIV IL+ V+ +
Sbjct: 356 LAALMAKAGLYVAAREPVEIPWFDQILADIGDEQSLQQSLSTFSGHIRRIVRILDRVTPD 415
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP+EG ALA ++LQ L D L V TTH+ +L LK +D RFENA+ E
Sbjct: 416 SLVLLDEVGAGTDPTEGSALAIALLQTLADAAQLTVATTHFGELKALKYQDDRFENASVE 475
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F +L PTYR+LWG G SNAL IA+ +G ++ +AQ+ V E +++
Sbjct: 476 FDDVSLSPTYRLLWGIPGRSNALTIARRLGLSDSVVAQAQQRVGGSASE----EVNQVIA 531
Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
L +RR+ E +A AA + + L+ E+ +A L +R L+ ++ + VQ+ + A+
Sbjct: 532 GLEAQRRRQEDKATEAAKILVQAEQLHAEVARKAGLLKQREQALQQEQERAVQEAIAQAR 591
Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
+I V++ + R +A +++ + AI P + F PQ
Sbjct: 592 REIAQVIKQLQ---RGPTAQG----AQQATQNLNAIATRQLPSQ--QAAPKPKPGFQPQV 642
Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 732
G++V + LG + A V+ P +D + V++G M++ V ++ + K +
Sbjct: 643 GDRVRIPRLG-QTAEVLTAPDEDGEMTVRFGLMKMTVALEDVESLQGEKPERPPK----- 696
Query: 733 RKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLF 792
A + P ++TS+N++D+RG RV EA L+ A+A E+ L+
Sbjct: 697 --------PPKAVAEMPPPPPAPAIRTSRNTVDVRGKRVAEAETVLEGAIA--EADGPLW 746
Query: 793 VIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 834
+IHG GTG +++ + L+ HP+V+++E +++ G TV ++
Sbjct: 747 IIHGHGTGKLRQGIHAFLQQHPQVSRFEPAEQADGGTGVTVVHV 790
>gi|428215373|ref|YP_007088517.1| MutS2 family protein [Oscillatoria acuminata PCC 6304]
gi|428003754|gb|AFY84597.1| MutS2 family protein [Oscillatoria acuminata PCC 6304]
Length = 846
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 294/847 (34%), Positives = 445/847 (52%), Gaps = 77/847 (9%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
+G QIP +LE++ LL QT + L I DI L A
Sbjct: 65 LGAMAAGDLQIP--DTLEQTLVLLAQTQEVYELENQGLTTLSFDGIHDIGDSLERADLHG 122
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+LS E+ A+ TL + + + + +L S L L+ + E+E++I
Sbjct: 123 ILSAEELLAIATTLSGARQLRRTIDDHPQL--------SVLNRLVADLRTYPEIEQEIHR 174
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNM-----ENLDSLLKKVAAQIFQAGGIDKPLITK 173
CID + + DRAS L IR +R+R + + L S+L++ + + + LITK
Sbjct: 175 CIDDRAQVA-DRASTRLGEIR-QRQRTVRDQIYQKLQSILQR------HSNAVQEQLITK 226
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R R + +K+ K +P GI + S SGAT ++EP VE NN L E AEE AI
Sbjct: 227 RSDRFVIPVKSPQKDAIP-GIVHDSSMSGATLYVEPHSVVELNNKARVLLREEKAEEEAI 285
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L LTA+I + +++ L+ V +DLA ARA ++ W++ P ++ +I +
Sbjct: 286 LRALTAKITEVVEDLERLLAIVTILDLATARARYSYWLNANPPTFINRGEEG--QTITLR 343
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
++HPLL+ A VPID+ V+ + +V
Sbjct: 344 QLRHPLLIWQQQHEQGNAV----------------------------VPIDLIVQPQIKV 375
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
V ITGPNTGGKT ++KTLGL LM+K GL++PAK LPWFD +LADIGD QSLEQ+LS
Sbjct: 376 VAITGPNTGGKTVTLKTLGLGILMAKVGLFIPAKVPVELPWFDFVLADIGDEQSLEQSLS 435
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFSGHI RI IL + +SLVL+DE+G+GTDP+EG ALA ++L +L D L + TTHY
Sbjct: 436 TFSGHIRRISRILGSCTPDSLVLLDEVGAGTDPTEGSALAIALLHHLADCSQLTIATTHY 495
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
+L LK +D RFENA+ EF TL+PTYR+LWG G SNAL IA+ +G +I+ +A
Sbjct: 496 GELKALKYEDDRFENASVEFDEATLQPTYRLLWGIPGRSNALTIARRLGLTSEIVDQAAN 555
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
LV P Q + L +R++ E++A+ A L E LYRE+ D+AK L R
Sbjct: 556 LVA---PTGTQD-VDRVIAGLENQRKQQETKAQEAGQLLGETERLYREVADKAKSLKERE 611
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
L+ + Q V + + AK +I V++ Q + + + N ++ + I E H
Sbjct: 612 RQLQQSQEQAVAEAIAVAKQEIAQVIRRL--QQGNVTGQDANQATQD----LQGIAEKHL 665
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
P V++ F P+ G++V + +G + V+ V D V V++G M++ +
Sbjct: 666 PSRQQKVAKPK-PGFRPKAGDRVRIPQIG-QTGEVLAVGEGDLEVTVRFGLMKMTIGITE 723
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE-ASYGPRVQTSKNSLDLRGMRVE 772
I + K P + Q + S +A ++ E+ A+ P V+TS+N+LD+RG RV
Sbjct: 724 IESLDGQK---VELPPKKPAATQTTKVSPAAEAATEKVATQAPIVRTSRNNLDIRGARVA 780
Query: 773 EASHQLDIALACW-ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YG 828
+A +L+ A+ L+++HG GTG +++ V E L+ HP+++ YE +P N G
Sbjct: 781 DAEMELEQAIGQQIPLGGALWIVHGKGTGKLRQGVQEFLKQHPQISHYEL-APQNEGGSG 839
Query: 829 CTVAYIK 835
T+AY+K
Sbjct: 840 VTIAYLK 846
>gi|257061571|ref|YP_003139459.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 8802]
gi|256591737|gb|ACV02624.1| MutS2 family protein [Cyanothece sp. PCC 8802]
Length = 830
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 287/883 (32%), Positives = 460/883 (52%), Gaps = 127/883 (14%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQ 58
+G QK IP ++EES++LL QT + Q+ + S I DI L A G
Sbjct: 27 LGSLSAQKLSIP--TNIEESKQLLAQTQEIYRLEQNLDIKWSFDGINDIGDSLERAQLGG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+LS E+ + TL V + +++ E E + L EL+++ E+E+ I
Sbjct: 85 MLSGQELLNIATTLAGVRRL-RRIIENQE-------DFPILAELVEDVRTYPEIEQNIYH 136
Query: 119 CIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
CID + + DRAS L IR R R ++ L +++++ Q G I +P+IT+R
Sbjct: 137 CID-EAGKVADRASVKLGEIRRHLKDIRDRIVQKLQNIIQR------QGGAIQEPVITQR 189
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA K +P GI + SS+GAT ++EP VE+ N + E EE AIL
Sbjct: 190 GDRFVIPVKAPQKDQIP-GIIHDSSSTGATLYIEPNSIVEWGNKRRQYLRQEQVEEEAIL 248
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS--INI 292
L+AEIA+ ++ YL+ +DL A+A ++ W++G P ++FD + I +
Sbjct: 249 RKLSAEIAEVYDDLDYLLAIATILDLTTAKARYSLWLEGNAP-----RFINFDQTEPITL 303
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
++HPLL+ P+ VPI+++V+ + R
Sbjct: 304 RQLRHPLLV------WQQKHEQGVPV----------------------VPINVQVDPKIR 335
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
VV ITGPNTGGKT ++KT+GLA+LM+K GL++PAK +PWF+ +LADIGD QS+EQ+L
Sbjct: 336 VVAITGPNTGGKTVTLKTIGLAALMAKVGLFIPAKEPVEIPWFEQVLADIGDEQSIEQSL 395
Query: 413 STFSGHISRIVDILELVSRE-------------------------------------SLV 435
STFSGHI RIV I E + + +LV
Sbjct: 396 STFSGHIRRIVRITEGLGNQEDQGNRQQATGNSEDQGSSENIPPSPPPPLPPSPPPNTLV 455
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP+EG ALA ++L YL D L + TTHY +L LK +D+RFENA+ EF
Sbjct: 456 LLDEVGAGTDPAEGSALAIALLNYLADHALLTIATTHYGELKALKYQDSRFENASVEFDD 515
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
+TL PTYR+LWG G SNAL IA+ +G + +I+Q A+ + E Q + L
Sbjct: 516 QTLSPTYRLLWGIPGRSNALIIAQRLGLNLEIVQEAKTRIGGFSEEINQ-----VIAGLE 570
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
+RR+ E +A A L + Y E+ ++A L +R LK + Q+VQ+ + AK +I
Sbjct: 571 AQRREQEQKALEAKQLLQKTEKFYTEVSEKATSLQQREQELKRYQEQEVQKAIAQAKEEI 630
Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
V++ + + A +++ A+ I + P + +S+ P+ GE+
Sbjct: 631 AQVIRQLQQGSQTAQK------AQQATEALDQITQHQLPK-----TPKKQASYQPKVGER 679
Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
+ + +LG + A V+E+ + + V++G M++ V I + K + Q
Sbjct: 680 IRLSNLG-QTAEVLEIDEEAQALTVRFGLMKMTVALTEIESLDGKK----------VEVQ 728
Query: 736 QEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIH 795
+ + + ++++ P ++TS+N++D+RG RV EA L+ A+A + +L++IH
Sbjct: 729 TQKKTPTVTATKPDKSASVPIIRTSQNTVDIRGSRVAEAESDLEKAIALATASGILWIIH 788
Query: 796 GMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYIK 835
G GTG +++ V E L+ HP++ ++E +P N G T+AY+K
Sbjct: 789 GKGTGKLRQGVHEFLKLHPQIDRFEL-APQNEGGSGVTLAYLK 830
>gi|254425115|ref|ZP_05038833.1| MutS2 family protein [Synechococcus sp. PCC 7335]
gi|196192604|gb|EDX87568.1| MutS2 family protein [Synechococcus sp. PCC 7335]
Length = 798
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 286/857 (33%), Positives = 448/857 (52%), Gaps = 108/857 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQL 59
+G+ Q+ IP ++ ES+ LL+QT+ A + S L I DI L + +
Sbjct: 27 IGNVAAQRLLIPISQA--ESEALLSQTTEATQLESTSAGLQFGGIRDIGVALERSRLQGI 84
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGF 118
LS E+ + TL + +++ +L P+L+ L+++ ELE++I
Sbjct: 85 LSGDELLDIATTLAGARRLRRQIDAQEDL---------PVLQALVEDLRTFPELEQEIHR 135
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
CID + + DRAS L +R + K + + S L+++ + Q G + + LIT+R R
Sbjct: 136 CIDDRGQVA-DRASTKLGNVRQQLKVIRDRIYSKLQRIIQR--QGGALQEALITQRNDRF 192
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
+ +KA+ K +P GI +VS+SG+T ++EP V+ N L E E AI +LT
Sbjct: 193 VLPVKAAQKDAVP-GIVHDVSTSGSTLYVEPHSIVDNGNKRRALRKEEEVESEAIRQMLT 251
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
++A++ ++++LM ++++DLA ARA + WM+G P +Q I + + HP
Sbjct: 252 YQVAEAFPDLEHLMITIVKLDLAAARARYGLWMEGNAPRFVNQEQ------ITLRQLTHP 305
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LLL K D VP D+ + E RVV ITG
Sbjct: 306 LLLWQQ----------------------------EKEQKDKVVPTDLVMRPELRVVAITG 337
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT ++KTLGL +LM+K G+++PAK LPWFD +LADIGD QS+EQ+LSTFSGH
Sbjct: 338 PNTGGKTVTLKTLGLTALMAKVGMFIPAKEPVELPWFDSVLADIGDEQSIEQSLSTFSGH 397
Query: 419 ISRIVDILELVSR--------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVT 470
+ RI IL+ + SLVL+DE+G+GTDPSEG ALA ++L++L + L V T
Sbjct: 398 VKRIGRILDTIDELKGENEVANSLVLLDEVGAGTDPSEGSALAIALLKHLANNTRLTVAT 457
Query: 471 THYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQR 530
THY +L LK +D RFENA+ EF E L PTYR+LWG G SNAL+IA+ +G ++++
Sbjct: 458 THYGELKSLKYEDERFENASVEFDDEKLAPTYRLLWGIPGRSNALSIARRLGLKHSVLEQ 517
Query: 531 AQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
A+ + + + + L +R+K E +A A L A Y+E+E A+ L
Sbjct: 518 AKAQM-----GGTNDNVNTVIEGLEAQRQKQEKRAAEAEKLVARAEKFYKEVEARAQSLR 572
Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE-----NQLRDASADEINSLIKESESAI 645
R LK ++ + V+ L A+ ++ V++D + Q + +E+N
Sbjct: 573 DREQKLKRQQEKSVETSLLHARAEVAKVIRDLQKGGLTGQDAQRATEELNR--------- 623
Query: 646 AAIVEAHRPDDDFSVS-ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
I E P D ++ + + P+ E+V + SLG+++A V+E DD V V++G
Sbjct: 624 --IEEKRLPTGDHPAKVKSADTGYRPKVSERVRLASLGNQVAEVIEEADDDGKVAVRFGL 681
Query: 705 MRVRVKKNNIRPIPNSK-----RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 759
M++ V ++I + K RK A P P+ + P V+T
Sbjct: 682 MKMTVDLSDIESLKGEKAEPIERKPKAQPVPKTLPE------------------APMVKT 723
Query: 760 SKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
N++DLRGMRV EA ++ A+A +++ L++IHG GTG ++ V L+ HP+V +
Sbjct: 724 ESNTVDLRGMRVNEAESVIEEAIA--KAKGPLWLIHGHGTGKLRRGVQAYLKTHPQVKSF 781
Query: 820 EQESPMN--YGCTVAYI 834
E ++ G TVA I
Sbjct: 782 EAADQVDGGKGVTVAKI 798
>gi|218248506|ref|YP_002373877.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 8801]
gi|218168984|gb|ACK67721.1| MutS2 family protein [Cyanothece sp. PCC 8801]
Length = 830
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 287/883 (32%), Positives = 460/883 (52%), Gaps = 127/883 (14%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQ 58
+G QK IP ++EES++LL QT + Q+ + S I DI L A G
Sbjct: 27 LGSLSAQKLSIP--TNIEESKQLLAQTQEIYRLEQNLDIKWSFDGINDIGDSLERAQLGG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+LS E+ + TL V + +++ E E + L EL+++ E+E+ I
Sbjct: 85 MLSGQELLNIATTLAGVRRL-RRIIENQE-------DFPILAELVEDVRTYPEIEQNIYH 136
Query: 119 CIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
CID + + DRAS L IR R R ++ L +++++ Q G I +P+IT+R
Sbjct: 137 CID-EAGKVADRASVKLGEIRRHLKDIRDRIVQKLQNIIQR------QGGAIQEPVITQR 189
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA K +P GI + SS+GAT ++EP VE+ N + E EE AIL
Sbjct: 190 GDRFVIPVKAPQKDQIP-GIIHDSSSTGATLYIEPNSIVEWGNKRRQYLRQEQVEEEAIL 248
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS--INI 292
L+AEIA+ ++ YL+ +DL A+A ++ W++G P ++FD + I +
Sbjct: 249 RKLSAEIAEVYDDLDYLLAIATILDLTTAKARYSLWLEGNAP-----RFINFDQTELITL 303
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
++HPLL+ P+ VPI+++V+ + R
Sbjct: 304 RQLRHPLLV------WQQKHEQGVPV----------------------VPINVQVDPKIR 335
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
VV ITGPNTGGKT ++KT+GLA+LM+K GL++PAK +PWF+ +LADIGD QS+EQ+L
Sbjct: 336 VVAITGPNTGGKTVTLKTIGLAALMAKVGLFIPAKEPVEIPWFEQVLADIGDEQSIEQSL 395
Query: 413 STFSGHISRIVDILELVSRE-------------------------------------SLV 435
STFSGHI RIV I E + + +LV
Sbjct: 396 STFSGHIRRIVRITEGLGNQEDQGNRQQATGNSEDQGSSENIPPSPPPPLPPSPPPNTLV 455
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP+EG ALA ++L YL D L + TTHY +L LK +D+RFENA+ EF
Sbjct: 456 LLDEVGAGTDPAEGSALAIALLNYLADHALLTIATTHYGELKALKYQDSRFENASVEFDD 515
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
+TL PTYR+LWG G SNAL IA+ +G + +I+Q A+ + E Q + L
Sbjct: 516 QTLSPTYRLLWGIPGRSNALIIAQRLGLNLEIVQEAKTRIGGFSEEINQ-----VIAGLE 570
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
+RR+ E +A A L + Y E+ ++A L +R LK + Q+VQ+ + AK +I
Sbjct: 571 AQRREQEQKALEAKQLLQKTEKFYTEVSEKATSLQQREQELKRYQEQEVQKAIAQAKEEI 630
Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
V++ + + A +++ A+ I + P + +S+ P+ GE+
Sbjct: 631 AQVIRQLQQGSQTAQK------AQQATEALDQITQHQLPK-----TPKKQASYQPKVGER 679
Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
+ + +LG + A V+E+ + + V++G M++ V I + K + Q
Sbjct: 680 IRLSNLG-QTAEVLEIDEEAQALTVRFGLMKMTVALTEIESLDGKK----------VEIQ 728
Query: 736 QEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIH 795
+ + + ++++ P ++TS+N++D+RG RV EA L+ A+A + +L++IH
Sbjct: 729 TQKKTPTVTATKPDKSASVPIIRTSQNTVDIRGSRVAEAESDLEKAIALATASGILWIIH 788
Query: 796 GMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYIK 835
G GTG +++ V E L+ HP++ ++E +P N G T+AY+K
Sbjct: 789 GKGTGKLRQGVHEFLKLHPQIDRFEL-APQNEGGSGVTLAYLK 830
>gi|67923383|ref|ZP_00516863.1| MutS 2 protein [Crocosphaera watsonii WH 8501]
gi|67854764|gb|EAM50043.1| MutS 2 protein [Crocosphaera watsonii WH 8501]
Length = 806
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 282/845 (33%), Positives = 445/845 (52%), Gaps = 93/845 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPL--DLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P SL +S++LL QT + Q+ + I D+ L A +LS E+ +
Sbjct: 35 LPIPTSLADSKELLAQTQEIYGLEQNLEIRWTFEGITDVGDSLKRATLKGILSGKELLNI 94
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
TL + + + + + EL P+L EL+ + ELE+ I CID + +
Sbjct: 95 ATTLAGMRRLRRIIDDCEEL---------PVLKELVADIRTYPELEKAIHHCID-EAGKV 144
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG-IDKPLITKRRSRMCVGIKASH 186
DRAS LE IR K E D + +K+ I Q GG I +P+IT+R R + +KA
Sbjct: 145 TDRASPKLESIRHNLK---EVRDRIYQKLQNIIQQKGGAIQEPVITQRGDRFVIPVKAGQ 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P GI + S +G T+++EP V+ N + E EE IL LT +IA+
Sbjct: 202 KEQIP-GITHDTSGTGGTFYIEPNSVVQMGNKRRQYLRQEEREEETILRQLTEKIAEVAE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+++YL+ + +DLA ARA ++ W+ P + +I + + HPLL+
Sbjct: 261 DLEYLLAIAMVLDLATARARYSFWLGANPP-----RFIQDKETITLRQLHHPLLV----- 310
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P+ +PI+++++ + RV+ ITGPNTGGKT
Sbjct: 311 -WQEKHEQGSPV----------------------IPINVQIKPDIRVIAITGPNTGGKTV 347
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGLA+LM+K GL++PAK +PWF+ ILADIGD QS+EQNLSTFSGHI RIV IL
Sbjct: 348 TLKTLGLAALMAKVGLFVPAKEPVEIPWFEKILADIGDEQSIEQNLSTFSGHIRRIVRIL 407
Query: 427 ELVSR-------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
E + + SL+L+DE+G+GTDP+EG ALA ++L L D+ L + TTHY
Sbjct: 408 EALEQATLSPETLPHSPSPSLILLDEVGAGTDPAEGSALAMALLNRLADQARLTIATTHY 467
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
+L LK +D+RFENA+ EF T PTYR+LWG G SNAL+IA+ +G D +I A+
Sbjct: 468 GELKALKYEDSRFENASVEFDDRTFSPTYRLLWGIPGRSNALSIAQRLGLDVDVIDEAKT 527
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
+ L + +++ L +RRK E +A+ A L + Y E+ +A L R
Sbjct: 528 RIGGLSQD-----VNDVIAGLEAQRRKQEEKAQEAQKLLQQTEKFYGEVTQKATALQERE 582
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
LK + +VQ+ + AK +I V+++ + ++ + +++ AI I +
Sbjct: 583 QDLKRYQELEVQKAIADAKEEIAKVIRNLQK------GNKSSQNAQKATEAINNISQRQL 636
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
P S+ P+ GE++ + +LG + A V+EV +D+ V+V++G M++ V +
Sbjct: 637 PK-----KVKPKVSYQPKVGEKIRLSNLG-QTAEVLEVSAEDEEVMVRFGLMKMTVAFRD 690
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG-PRVQTSKNSLDLRGMRVE 772
I + K + K +E +Q+ + P ++TSKN++D+RG RV
Sbjct: 691 IESLDGQKIET---------KVKEKKQAVTPPPPQPSKPKDVPTIRTSKNTIDIRGSRVA 741
Query: 773 EASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCT 830
EA L+ A+A +L++IHG GTG +++ V E L+ HP++AK+E + G T
Sbjct: 742 EAEADLENAIAQATDSGILWIIHGKGTGKLRQGVHEFLKRHPQIAKFELAPQKEGGSGVT 801
Query: 831 VAYIK 835
+A+ K
Sbjct: 802 LAHFK 806
>gi|170079175|ref|YP_001735813.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus sp. PCC 7002]
gi|169886844|gb|ACB00558.1| DNA mismatch repair protein [Synechococcus sp. PCC 7002]
Length = 799
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 286/831 (34%), Positives = 451/831 (54%), Gaps = 80/831 (9%)
Query: 13 FGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
F +S +S+ LL QT AL + I DI+ L A G L++ ++ +
Sbjct: 39 FPQSQADSEILLAQTVEMQALDGAVDNGVSFEGIGDISDALERATVGGLIAGKDLLLIAT 98
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
TL V + ++L E AEL+ L R L++ ELE+ I CID + + DR
Sbjct: 99 TLAGVRRL-RRLVENAELELSQLTR------LVEQVRTYPELEQDIHHCIDDRGDVT-DR 150
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
AS LE IR + K E + L+++ + +G I + +IT+R R + +KA K +
Sbjct: 151 ASPKLEGIRVKIKGAREQIYQTLQRIMQR--HSGSIQEAVITQRGDRFVLPVKAGQKEQI 208
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P GI ++SS+G+T ++EPKG VE N + E E +L LT ++A+ +++
Sbjct: 209 P-GIVHDISSTGSTLYIEPKGIVELGNRLRQAVKQEEREIEIVLRQLTEKVAEVVEDLEK 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L+ +DLA RA ++ W+DG P ++ D + ++HPLL+ +
Sbjct: 268 LLAIATTLDLAMTRARYSLWLDGHPP-----KFIAPDQPTILRQLRHPLLVWQEKQE--- 319
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
E+ E+ +PI++++ E RVV ITGPNTGGKT ++KT
Sbjct: 320 ------------ESLEV-------------IPINVQIRPEIRVVAITGPNTGGKTVTLKT 354
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LG+A+LM+K GL++PA +PWFD +LADIGD QSL+Q+LSTFSGHI R+ I+E +
Sbjct: 355 LGMAALMAKVGLFIPAIAPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRVGRIIEALD 414
Query: 431 RES---LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+ES LVL+DE+G+GTDP+EG ALA ++L+YL D+ L V TTHY +L LK +D RFE
Sbjct: 415 QESQNNLVLLDEVGAGTDPTEGSALAIALLKYLADQTQLTVATTHYGELKALKYEDERFE 474
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF +LRPTY++LWG G SNAL IA+ +G D +I++ AQ L+
Sbjct: 475 NASVEFDEYSLRPTYKLLWGIPGRSNALAIAQRLGLDAEIVETAQDLLGNTNT-----NV 529
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+E+ +L +RR+ E +A+ A +L + Y E+ +A DL RR A LK + QQVQ
Sbjct: 530 NEVIAALEAQRREQEQKAKEAEALLKQTERFYTEVSSKAADLQRREAELKLAQDQQVQAA 589
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
+ AK +I V++ + A ++ + E+ IAA S +
Sbjct: 590 IAEAKAEIAQVIRTLQKGQPTAQKAQVAT---EALGDIAA--------SKMSQPKRKKPG 638
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
+ PQ GE++ + LG + A V+E+ D+ T++ ++G M++ + I + K + A
Sbjct: 639 YQPQLGEKIRISKLG-QTAEVIELDPDNKTLVARFGVMKMSLDWTEIESLQGQKVE--AE 695
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACW 785
P P+ K+Q ++ + + V+T++N++D+RG R+ +A L+ IA A
Sbjct: 696 PKPKTPKKQAPPKAKTPETVT--------VRTTRNTIDIRGQRMHQAESSLEQAIANATA 747
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 834
V+++IHG GTG ++E V E L+ HP++ +YE + G T+AY
Sbjct: 748 AGSQVIWIIHGKGTGKLREGVHEFLKYHPQIQRYELADQKEGGAGVTLAYF 798
>gi|376003750|ref|ZP_09781556.1| DNA mismatch repair protein MutS [Arthrospira sp. PCC 8005]
gi|375327894|emb|CCE17309.1| DNA mismatch repair protein MutS [Arthrospira sp. PCC 8005]
Length = 818
Score = 417 bits (1072), Expect = e-113, Method: Compositional matrix adjust.
Identities = 283/845 (33%), Positives = 444/845 (52%), Gaps = 81/845 (9%)
Query: 10 QIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+ ++ EE+ +LL QT A L + Q L L I+DI L A +L E+ A
Sbjct: 36 QLAIPETKEETDRLLAQTKEAYQLELKLVQGLSLDGIQDIGASLERADRQGILFGEELLA 95
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL + + + D + L L++ ELE++I CID + +
Sbjct: 96 IATTLAGARQLRRVI--------DDQEDVPVLTSLVEELRTYPELEQEIHRCIDERGEVT 147
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS + IRA + + + +L+ + + QA + + +IT+R R + +KA K
Sbjct: 148 -DRASVKMGAIRARLQSTRDRIYQVLQGILQRKAQA--VQQQIITQREGRFVIPVKAPQK 204
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S++GAT ++EP V NN ++ +E E AI LT ++A +
Sbjct: 205 DAIP-GIVHDASTTGATVYVEPHSIVALNNQLRQIQRAEQTEAEAIRRSLTEQVAAVVPD 263
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V IDLA A+A ++ W+ P S +IN+ ++HPLL+
Sbjct: 264 LEKLLAIVTTIDLALAKARYSYWLQANPPRFIDPGDTS--ETINLRQLRHPLLI------ 315
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ + E V PIDI + + RVV ITGPNTGGKT +
Sbjct: 316 ----------WQQEYEQGPEVV------------PIDITINPQIRVVAITGPNTGGKTVT 353
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GLA++M+K GL++PA+ +PWF +LADIGD QS+EQ+LSTFSGHI RI IL+
Sbjct: 354 LKTIGLAAIMAKVGLFIPAREPVEMPWFGQVLADIGDEQSIEQSLSTFSGHIRRITRILQ 413
Query: 428 LVSR--------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
+ SLVL+DEIG+GTDP+EG ALA ++LQ D L V TTH+
Sbjct: 414 AIGEPMRVTEAGESDRICPSLVLLDEIGAGTDPTEGTALAIALLQKFADLTRLTVATTHF 473
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
DL LK KDTRFENA+ EF +L+PTYR+LWG G SNAL IA+ +G D I++ A
Sbjct: 474 GDLKALKYKDTRFENASVEFDDASLQPTYRLLWGIPGRSNALKIAERLGLDHDIVKLAGS 533
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
V + Q + + L +RR+ E++A A+ L E L+ E+ + A L R
Sbjct: 534 YVGGGDEDVNQ-----VIEGLEAQRRQQETKAIAASQLLQETERLHGELAERAISLQERE 588
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
LK + Q++++ L AK +I V++ + Q + +AD +++ + + AI E +
Sbjct: 589 RQLKQAQEQEIKETLLQAKAEIAKVIRRLQ-QGKATAADA-----QKATARLDAIAENYL 642
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
P + + +F P+ G+++ + +G + A ++ P D++ + V++G M++ V
Sbjct: 643 PSR--QATPVRSPNFMPKVGDRIRIPRIG-QTAEILSGPDDNNQLTVRFGIMKMTVGLGE 699
Query: 714 IRPIPNSKRK-NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
I + K + +P P+ K + ++ E S PRV+T KN+LDLRG RV
Sbjct: 700 IESLDGQKVELPKTSPTPKADK------TPKPITNKPEPSQLPRVRTDKNTLDLRGKRVS 753
Query: 773 EASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN--YGCT 830
EA ++D L L++IHG GTG ++ V E+L+ HP+V ++E S + G T
Sbjct: 754 EAETEIDRTLGQILDFGALWIIHGKGTGQLRRGVHELLKEHPQVERFELASNPDGGAGVT 813
Query: 831 VAYIK 835
+AY+K
Sbjct: 814 IAYLK 818
>gi|126657853|ref|ZP_01729006.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. CCY0110]
gi|126620793|gb|EAZ91509.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. CCY0110]
Length = 818
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 281/855 (32%), Positives = 448/855 (52%), Gaps = 101/855 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQLLSPSEICAV 68
+P SLEES++LL QT + Q+ + + I D+ L A LS E+ +
Sbjct: 35 LPIPTSLEESKELLEQTKEIYRLEQNLEIKWTFEGITDVGDSLKRATLKGNLSGKELLNI 94
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
TL + + + + + EL L EL+ + ELE+ I CID + +
Sbjct: 95 ATTLAGMRRLRRIIEDYEEL--------PTLTELVADIRTYPELEKTIHHCID-EAGKVA 145
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
DRAS L IR K N + + L+ + Q + G I + +IT+R R + +KA+ K
Sbjct: 146 DRASTKLGEIRHNLKENRDRIYQKLQNIMQQ--KGGAIQETVITQRGDRFVLPVKAAQKE 203
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P GI + S +G T+++EP V+ N + E EE AIL L+ ++A+ ++
Sbjct: 204 QIP-GIIHDTSGTGGTFYIEPNSVVQMGNKRRQYLRQEEREEEAILRQLSEQVAEVAEDL 262
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+YL+ +DLA AR+ ++ W+ G P + +I + + HPLL+
Sbjct: 263 EYLLAIATILDLATARSRYSFWLGGNAP-----RFIEDKETITLRQLHHPLLV------W 311
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+P+ VPI++++ E RV+ ITGPNTGGKT ++
Sbjct: 312 QERHEQGSPV----------------------VPINVQINPEIRVIAITGPNTGGKTVTL 349
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GLA+LM+K GL++PAK LPWF ILADIGD QS+EQNLSTFSGHI RIV ILE
Sbjct: 350 KTVGLAALMAKVGLFVPAKEPVELPWFKQILADIGDEQSIEQNLSTFSGHIRRIVRILEA 409
Query: 429 V-----SRE---------------------SLVLIDEIGSGTDPSEGVALATSILQYLRD 462
+ SRE SL+L+DE+G+GTDP+EG ALA ++L +L D
Sbjct: 410 LDQGTESREQEAGIRDQGSVLSETPHTPHPSLILLDEVGAGTDPAEGSALAIALLHHLAD 469
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
L + TTHY +L LK +D+RFENA+ EF +L PTYR+LWG G SNAL+IA+ +G
Sbjct: 470 HARLTIATTHYGELKALKYEDSRFENASVEFDDRSLSPTYRLLWGIPGRSNALSIAQRLG 529
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
D +I++ A+ + L + +++ L +RR+ E +A A L E Y E+
Sbjct: 530 LDHEIVEEAKTRIGGLSQD-----VNDVIAGLEAQRREQEEKALEAQKLLQETEKFYTEV 584
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
++A L +R LK + Q+VQ+ + AK +I V+++ + + + +++
Sbjct: 585 TEKATALQQREQDLKRHQEQEVQKAIAEAKEEIAQVIRNLQQGKKSSQK------AQQAT 638
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
AI I + P T S+ P+ GE++ + +LG + A V++V +D+ V+V++
Sbjct: 639 EAITNIGQKQLPK-----KAKPTVSYQPKVGEKIRLSNLG-QTAEVLDVSPEDEEVMVRF 692
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G M++ V +I + K + E +Q+ + S + P ++TS+N
Sbjct: 693 GLMKMTVSFRDIESLDGQKVETKVK---------EKKQAVTPPPSPSKPKDVPTIRTSRN 743
Query: 763 SLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE-- 820
++D+RG RV EA L+ A+A ++++IHG GTG +++ V E L+ HP++A++E
Sbjct: 744 TIDIRGNRVAEAEADLENAIAQATESGLIWIIHGKGTGKLRQGVHEFLKRHPQIARFELA 803
Query: 821 QESPMNYGCTVAYIK 835
+ G T+AY K
Sbjct: 804 PQKEGGSGVTLAYFK 818
>gi|209523920|ref|ZP_03272472.1| MutS2 family protein [Arthrospira maxima CS-328]
gi|423063765|ref|ZP_17052555.1| MutS2 family protein [Arthrospira platensis C1]
gi|209495592|gb|EDZ95895.1| MutS2 family protein [Arthrospira maxima CS-328]
gi|406714614|gb|EKD09775.1| MutS2 family protein [Arthrospira platensis C1]
Length = 816
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 283/845 (33%), Positives = 444/845 (52%), Gaps = 81/845 (9%)
Query: 10 QIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+ ++ EE+ +LL QT A L + Q L L I+DI L A +L E+ A
Sbjct: 34 QLAIPETKEETDRLLAQTKEAYQLELKLVQGLSLDGIQDIGASLERADRQGILFGEELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL + + + D + L L++ ELE++I CID + +
Sbjct: 94 IATTLAGARQLRRVI--------DDQEDVPVLTSLVEELRTYPELEQEIHRCIDERGEVT 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS + IRA + + + +L+ + + QA + + +IT+R R + +KA K
Sbjct: 146 -DRASVKMGEIRARLQSTRDRIYQVLQGILQRKAQA--VQQQIITQREGRFVIPVKAPQK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S++GAT ++EP V NN ++ +E E AI LT ++A +
Sbjct: 203 DAIP-GIVHDASTTGATVYVEPHSIVVLNNQLRQIQRAEQTEAEAIRRSLTEQVAAVVPD 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V IDLA A+A ++ W+ P S +IN+ ++HPLL+
Sbjct: 262 LEKLLAIVTTIDLALAKARYSYWLQANPPRFIDPGDTS--ETINLRQLRHPLLI------ 313
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ + E V PIDI + + RVV ITGPNTGGKT +
Sbjct: 314 ----------WQQEYEQGPEVV------------PIDITINPQIRVVAITGPNTGGKTVT 351
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GLA++M+K GL++PA+ +PWF +LADIGD QS+EQ+LSTFSGHI RI IL+
Sbjct: 352 LKTIGLAAIMAKVGLFIPAREPVEMPWFGQVLADIGDEQSIEQSLSTFSGHIRRITRILQ 411
Query: 428 LVSR--------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
+ SLVL+DEIG+GTDP+EG ALA ++LQ D L V TTH+
Sbjct: 412 AIGEPMRVTEAGESDRICPSLVLLDEIGAGTDPTEGTALAIALLQKFADLTRLTVATTHF 471
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
DL LK KDTRFENA+ EF +L+PTYR+LWG G SNAL IA+ +G D I++ A
Sbjct: 472 GDLKALKYKDTRFENASVEFDDASLQPTYRLLWGIPGRSNALKIAERLGLDHDIVKLAGS 531
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
V + Q + + L +RR+ E++A A+ L E L+ E+ + A L R
Sbjct: 532 YVGGGDEDVNQ-----VIEGLEAQRRQQETKAIAASQLLQETERLHGELAERAISLQERE 586
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
LK + Q++++ L AK +I V++ + Q + +AD +++ + + AI E +
Sbjct: 587 RQLKQAQEQEIKETLLQAKAEIAKVIRRLQ-QGKATAADA-----QKATARLDAIAENYL 640
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
P + + +F P+ G+++ + +G + A ++ P D++ + V++G M++ V
Sbjct: 641 PSR--QATPVRSPNFMPKVGDRIRIPRIG-QTAEILSGPDDNNQLTVRFGIMKMTVGLGE 697
Query: 714 IRPIPNSKRK-NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
I + K + +P P+ K + ++ E S PRV+T KN+LDLRG RV
Sbjct: 698 IESLDGQKVELPKTSPTPKADK------TPKPITNKPEPSQLPRVRTDKNTLDLRGKRVS 751
Query: 773 EASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN--YGCT 830
EA ++D L L++IHG GTG ++ V E+L+ HP+V ++E S + G T
Sbjct: 752 EAETEIDRTLGQILDFGALWIIHGKGTGQLRRGVHELLKEHPQVERFELASNPDGGAGVT 811
Query: 831 VAYIK 835
+AY+K
Sbjct: 812 IAYLK 816
>gi|428773368|ref|YP_007165156.1| MutS2 family protein [Cyanobacterium stanieri PCC 7202]
gi|428687647|gb|AFZ47507.1| MutS2 family protein [Cyanobacterium stanieri PCC 7202]
Length = 822
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 286/865 (33%), Positives = 454/865 (52%), Gaps = 103/865 (11%)
Query: 4 AVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS-QP-LDLSTIEDIAGILNSAVSGQLLS 61
+ + + K+L E+QKLL QT + S P S I DI L A G +L
Sbjct: 28 GAIASSHLTIPKTLSETQKLLEQTKEVYHIETSLNPNWSFSGIHDIGDALERAKLGGILK 87
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
E+ + TL V +KL E L+ L EL+++ ELE++I +CID
Sbjct: 88 GEELLNLATTLAGV----RKLRRVIE----DLEDSPTLKELVESLRTFPELEQEIHYCID 139
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMC 179
+ I +RAS L IR + ++ L S +++ I Q G + +P++T+R R
Sbjct: 140 DRGEIT-ERASPQLGEIR----QKIKGLRSKIQQTLQNIIQRNGNALQEPVVTQRGDRFV 194
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +KASH + GI + S++G+T + EPK ++ N E EE IL LT
Sbjct: 195 LPVKASHSGQI-SGIVHDTSTTGSTLYTEPKSIIDLGNRLQTSRGQEKREEEKILRTLTE 253
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI--EGIKH 297
++A+ E++ L+ +DLA A+A ++ W++G P V F S NI ++H
Sbjct: 254 KVAEVWEELEQLLAIATALDLATAKARYSMWLEGNPP-----QFVDFQSQENITLRQLRH 308
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLL+ + S A VPID+ ++ +TRVV IT
Sbjct: 309 PLLIWQQKKEESGAV----------------------------VPIDVLIKSDTRVVAIT 340
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT ++KT+G+ +LM+K G+++PAK+ +PWFD +LADIGD QSLEQNLSTFSG
Sbjct: 341 GPNTGGKTVTLKTIGITALMAKVGIFIPAKDPVLIPWFDQVLADIGDEQSLEQNLSTFSG 400
Query: 418 HISRIVDILELVS---------------------RESLVLIDEIGSGTDPSEGVALATSI 456
HI RI+ I++ ++ SLVL+DE+G+GTDP+EG A+A +I
Sbjct: 401 HIRRIIRIMDALNGSTPIQNPDDDSPTVETQHGLSNSLVLLDEVGAGTDPTEGSAIAIAI 460
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L++L + L + TTHY +L LK D+RFENA+ EF +L+PTYR+LWG G SNA+
Sbjct: 461 LKHLAEHNLLTIATTHYGELKTLKYNDSRFENASVEFDDVSLQPTYRVLWGIPGRSNAII 520
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
IA+ +G +I +Q+L + Q L L +RR+ E + + A L ++
Sbjct: 521 IAQRLGLPSDVIADSQELAGGFSQDVNQ-----LIGELENQRREQEEKHKQAQDLLSKTE 575
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
Y+E+E +A L R LK+++ Q VQ+ L AK QI V+++ + + + D +
Sbjct: 576 RFYQEVEAKATSLQDRERDLKSQQEQAVQKMLLDAKSQIAQVIKELQKKGNPTAQDAQQA 635
Query: 637 ---LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
L K + + I ++ + SS+ P+ GE+V + SLG + A V++V
Sbjct: 636 RENLEKIGDRFLTPIQKSRK-----------KSSYKPKVGERVRILSLG-QTAEVLDVDE 683
Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 753
+ + ++G M++ + +I + + + P ++++ Q ++N+ A
Sbjct: 684 TAEQLSARFGMMKMVLPFTDIESLDGKRFEKETPPKTEVKQKTPKVQ-----NNNQTAKT 738
Query: 754 GPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNH 813
PRV+ KN++D+RG RV A L+ A+A +L+++HG GTG ++ V E L+ H
Sbjct: 739 TPRVRVEKNTVDIRGQRVHLAEPVLERAIASATELGLLWIVHGKGTGSLRNGVHEFLQRH 798
Query: 814 PRVAKYEQESPMN---YGCTVAYIK 835
P+V+KYE +P N G T+AY+K
Sbjct: 799 PQVSKYEI-APRNEGGAGVTIAYLK 822
>gi|186680652|ref|YP_001863848.1| recombination and DNA strand exchange inhibitor protein [Nostoc
punctiforme PCC 73102]
gi|186463104|gb|ACC78905.1| MutS2 family protein [Nostoc punctiforme PCC 73102]
Length = 805
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 288/856 (33%), Positives = 450/856 (52%), Gaps = 98/856 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
+G + +IP S +S++LL QT + + L I+DI L A
Sbjct: 27 LGATAARNLKIP--DSQTQSEQLLEQTKEVYQLESRLTTGLSFEGIQDIGDSLERAERSG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+L+ E+ A+ TL ++ + + D+ + L EL+ + ELE++I
Sbjct: 85 VLAGDELLAIATTLAGARSLRRVI--------DNQEDLPILTELVADLRTYPELEQEIHR 136
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRRS 176
CID + + DRAS+ L IR + +R L S + + I QA G + + LIT+R
Sbjct: 137 CIDERAQVT-DRASQKLGEIRTDLRR----LRSQITQKLQNILQAKSGAVQEQLITQRSD 191
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R + +KA K +P GI + S+SGAT ++EP V N ++ E AEE AI +
Sbjct: 192 RFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSVVPLGNQLRQIIRKEQAEEEAIRRI 250
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
LT ++A + +++ L+ +DLA AR+ ++ W+ G P Q S +I + ++
Sbjct: 251 LTEQVAAVKPDLERLLAIATTLDLATARSRYSYWL-GANPPRFIQRQDS--ETITLRNLR 307
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLL+ P+ VP+D+ + RVV I
Sbjct: 308 HPLLV------WQQQHEQGQPV----------------------VPVDLLINPLIRVVTI 339
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LSTFS
Sbjct: 340 TGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPWFDKVLADIGDEQSLQQSLSTFS 399
Query: 417 GHISRIVDILELVSR---------------ESLVLIDEIGSGTDPSEGVALATSILQYLR 461
GHI RI ILE + +SLVL+DE+G+GTDP EG ALA ++LQYL
Sbjct: 400 GHIRRISRILEALGNGESGSEDGEKEMPNPQSLVLLDEVGAGTDPVEGSALAIALLQYLA 459
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
+ L + TTH+ +L LK +D RFENA+ EF TL PTYR+LWG G SNAL IA +
Sbjct: 460 NHAQLTIATTHFGELKALKYEDERFENASVEFDESTLSPTYRLLWGIPGRSNALTIALRL 519
Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
G +++Q+A+ V E Q + L +RR+ E++A A SL + LY+E
Sbjct: 520 GLKPEVVQQAKTQVGEATDEVNQ-----VIAGLEAQRRRQETKAAEAQSLLQQAERLYKE 574
Query: 582 IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES 641
+ +A L+ R + L+A + VQQ + AK +I V++ Q +A E +++
Sbjct: 575 VSAKAASLEERESSLRASQEIAVQQAIVQAKGEIAQVIRRL--QKGTPTAQE----AQQA 628
Query: 642 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
+A+ I + ++P + + F P+ G++V + LG ++A V+ P +D + V+
Sbjct: 629 TNALNQIGQLYQP----ATPAKPKAGFMPKVGDRVRIPKLG-QIADVIAAPDEDGELSVR 683
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
+G M++ VK ++ + K P P ++ + S P ++TSK
Sbjct: 684 FGLMKMTVKLQDVESLDGQK------PEPIVKAKPAPAAVTPPAQSV------PEIRTSK 731
Query: 762 NSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE- 820
N++DLRG RV +A + LD A++ E+ +++IHG GTG +++ V L+ HPRV YE
Sbjct: 732 NTIDLRGKRVADAEYILDKAIS--EATGPIWIIHGYGTGKLRQGVHAFLQQHPRVNNYEP 789
Query: 821 -QESPMNYGCTVAYIK 835
+++ G TVA+IK
Sbjct: 790 AEQADGGTGVTVAHIK 805
>gi|409991618|ref|ZP_11274864.1| recombination and DNA strand exchange inhibitor protein
[Arthrospira platensis str. Paraca]
gi|291572107|dbj|BAI94379.1| MutS2 family protein [Arthrospira platensis NIES-39]
gi|409937528|gb|EKN78946.1| recombination and DNA strand exchange inhibitor protein
[Arthrospira platensis str. Paraca]
Length = 816
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 282/847 (33%), Positives = 445/847 (52%), Gaps = 85/847 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+ ++ EE+ +LL QT A L + Q L L I+DI L A +L E+ A
Sbjct: 34 QLAIPETKEETDRLLAQTKEAYQLQLKLVQGLSLDGIQDIGASLERADRQGILFGEELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL + + + D + L L++ ELE++I CID + +
Sbjct: 94 IATTLAGARQLRRVI--------DDQEDVPVLTSLVEELRTYPELEQEIHRCIDERGEVT 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS + IRA + + + +L+ + + QA + + ++T+R R + +KA K
Sbjct: 146 -DRASVKMGEIRARLQSTRDRIYQILQGILQRKAQA--VQQQIVTQREGRFVIPVKAPQK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S++GAT ++EP V NN ++ +E E AI LT ++A +
Sbjct: 203 DAIP-GIVHDASTTGATVYVEPHPIVALNNELRQIQRAEQTEAEAIRRSLTEQVAAVVPD 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V IDLA A+A ++ W+ P S +IN+ ++HPLL+
Sbjct: 262 LEKLLAIVTTIDLALAKARYSYWLKANPPRFIDPGDTS--ETINLRQLRHPLLI------ 313
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ + E V PIDI + + RVV ITGPNTGGKT +
Sbjct: 314 ----------WQQEYEQGPEVV------------PIDITINPQIRVVAITGPNTGGKTVT 351
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GLA++M+K GL++PA+ +PWF +LADIGD QS+EQ+LSTFSGHI RI IL+
Sbjct: 352 LKTIGLAAIMAKVGLFIPAREPVEMPWFGQVLADIGDEQSIEQSLSTFSGHIRRITRILQ 411
Query: 428 LVSR--------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
+ +SLVL+DEIG+GTDP+EG ALA ++LQ DR L V TTH+
Sbjct: 412 AIGEPMRVTEAGEYDRICQSLVLLDEIGAGTDPTEGTALAIALLQTFADRTRLTVATTHF 471
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
DL LK KDTRFENA+ EF+ +L+PTYR+LWG G SNAL IA+ +G D I++ A
Sbjct: 472 GDLKALKYKDTRFENASVEFNDASLQPTYRLLWGIPGRSNALKIAERLGLDHDIVKLAGS 531
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
V + Q + L +RR+ E++A A+ L E L+ E+ + A L R
Sbjct: 532 YVGGGDEDVNQ-----VIAGLEAQRRQQETKAIAASQLLKETERLHGELAERAISLQERE 586
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
LK + +++++ L AK +I V++ + Q + +AD +++ + + AI E +
Sbjct: 587 RQLKQAQEKEIKETLLQAKGEIAKVIRRLQ-QGKPTAADA-----QKATATLDAIAENYL 640
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
P + +F P+ G+++ + +G + A ++ P D++ + V++G M++ V
Sbjct: 641 PSR--QATPAPLPNFMPKVGDRIRIPRIG-QTAEILSGPDDNNQLTVRFGIMKMTVGLGE 697
Query: 714 IRPIPNSK---RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
I + K K +A P + ++ S ++ E S P V+T KN+LDLRG R
Sbjct: 698 IESLDGQKVELPKTSATP--------KADKTHSPVTNKPEPSKLPNVRTDKNTLDLRGKR 749
Query: 771 VEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN--YG 828
V EA ++D L L++IHG GTG ++ V E+L+ HP+V ++E S + G
Sbjct: 750 VSEAETEIDRTLGQILDFGALWIIHGKGTGQLRRGVHELLKEHPQVERFELASNPDGGAG 809
Query: 829 CTVAYIK 835
T+AY+K
Sbjct: 810 VTIAYLK 816
>gi|428778485|ref|YP_007170271.1| MutS2 family protein [Dactylococcopsis salina PCC 8305]
gi|428692764|gb|AFZ48914.1| MutS2 family protein [Dactylococcopsis salina PCC 8305]
Length = 798
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 254/754 (33%), Positives = 406/754 (53%), Gaps = 73/754 (9%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D L+ L L+ ELE++I C+D K + +RAS L IR + K + +
Sbjct: 109 DGLEASPRLKALISQVRTYPELEKEINRCLDDKGKVT-ERASPKLAEIRQKIKERRDRIY 167
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
L+ + Q Q G I +P+IT+R R + +KA K + GI + SS+GAT ++EP
Sbjct: 168 QKLQNIIQQ--QGGAIQEPVITQRNDRFVLPVKAGQKESI-RGIVHDSSSTGATLYIEPN 224
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
VE N + + E EE +L +LT ++A + +++ L+ ++DLA AR+ ++ W
Sbjct: 225 SVVELGNQQRQYIRQEQREEERVLQVLTEQVATVKEDLELLLAVATKLDLATARSRYSLW 284
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
++ P + + I + ++HPLL+ P+
Sbjct: 285 LEANPPRFVEGNS---NEPITLRRLRHPLLV------WQQHHEQGTPV------------ 323
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VPID+++ ETRVV ITGPNTGGKT ++KT+GLA+LM+K GL++PAK
Sbjct: 324 ----------VPIDVQINPETRVVAITGPNTGGKTVTLKTVGLAALMAKVGLFVPAKEPV 373
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS------RESLVLIDEIGSGT 444
+PWFD ILADIGD QS+EQNLSTFSGHI RI I++ + + L+L+DE+G+GT
Sbjct: 374 EIPWFDKILADIGDEQSIEQNLSTFSGHIRRITRIIDSLQPSDSEIQPCLILLDEVGAGT 433
Query: 445 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 504
DP+EG A+A ++L+YL +V L + TTHY +L LK +D RFENA+ EF+ ETL PTYR+
Sbjct: 434 DPAEGSAIAIALLKYLAQQVRLTIATTHYGELKALKYQDERFENASVEFNDETLSPTYRL 493
Query: 505 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 564
LWG G SNAL IA+ +G +I+ A+ + + Q + L +RR+ E +
Sbjct: 494 LWGIPGRSNALTIARRLGLAGEILDMAKNRIGGGSEDINQ-----VIAGLENQRREQEEK 548
Query: 565 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN 624
A+ A L + Y+E+ A+ L+ R LK + Q V Q ++ AK +I V++ +
Sbjct: 549 AQEARQLLEQAEKFYQEVSSRAQALEARETELKRSQEQAVNQAISEAKQEIAQVIKQLQK 608
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
++ +++ +++ I HRP + + N + PQ GE+V + ++
Sbjct: 609 ------GEKTGQEAQKATASVNEIASRHRPQIEPPKPKPN---YQPQIGEKVRLSQF-NQ 658
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
V+ P D + ++ G M++ V +I + ++ + +Q S
Sbjct: 659 TGEVLTAPNADGKLTIRLGTMKMSVSLADIESLDG------------IKPEVPQKQKSSN 706
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKE 804
S + A+ P V+T +N+LDLRG RV A QL+ A+ ++ L++IHG GTG +++
Sbjct: 707 SSQKKPANNAPTVRTEQNTLDLRGYRVNHAESQLEEAIRS-QNTGALWIIHGKGTGKLRQ 765
Query: 805 RVLEILRNHPRVAKYEQESPMN---YGCTVAYIK 835
V E L+ HP++ ++E +P N G T+AY+K
Sbjct: 766 GVQEFLKQHPQIDRFET-APQNEGGNGVTIAYLK 798
>gi|443320530|ref|ZP_21049624.1| MutS2 family protein [Gloeocapsa sp. PCC 73106]
gi|442789744|gb|ELR99383.1| MutS2 family protein [Gloeocapsa sp. PCC 73106]
Length = 793
Score = 410 bits (1053), Expect = e-111, Method: Compositional matrix adjust.
Identities = 277/832 (33%), Positives = 449/832 (53%), Gaps = 90/832 (10%)
Query: 16 SLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDI-AGILNSAVSGQLLSPSEICAVRRTL 72
+L S++LL QT + + S I+DI +L + + G LL +E+ + T+
Sbjct: 40 NLATSRELLTQTQEIWQLQEHFSTAWSFQGIKDIRPFLLRAQLKGTLLG-TELLDIASTV 98
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
V + K + E +E +P+LE L+ ELE++I +CID + + DRA
Sbjct: 99 AGVRKLRKIIEEQSE---------TPVLENLVATVRTYPELEQEIYYCID-EGGEVEDRA 148
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
S L IR++ K + +L+ + + Q + + LIT+R R + +K HK +P
Sbjct: 149 SLKLAEIRSKLKEFRNKIQKILQGIIQR--QGNALQETLITQRSDRFVLPVKTPHKEQIP 206
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + SS+G+T ++EP+ ++ N +L E AE +L LT ++A +++ +
Sbjct: 207 -GIVHDSSSTGSTLYVEPQAIIQLGNQLKQLLRREQAEIEIVLKALTEKVAAITSDLEQV 265
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ +DLA ARA ++ W++ P L S + +++I + +KHPLL+ A
Sbjct: 266 VLVATTLDLATARANYSYWLNAHPPQLIS---LDQEATITLRELKHPLLIWQEKHEQGPA 322
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
VPI+++++ + RVV ITGPNTGGKT ++KT+
Sbjct: 323 V----------------------------VPINVRIQPDIRVVAITGPNTGGKTVTLKTI 354
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS- 430
G+A+LM+K GL++PA + +PWF+ ILADIGD QSLEQ+LSTFSGHI RI+ IL+ +
Sbjct: 355 GIAALMAKVGLFIPAADPVEIPWFEKILADIGDEQSLEQSLSTFSGHIKRIIRILDAIGR 414
Query: 431 ----RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
R +LVL+DE+G+GTDP+EG ALA ++LQ+L D L + TTHY +L LK +D+RF
Sbjct: 415 PEDLRSALVLLDEVGAGTDPTEGTALAIALLQHLADSAWLTIATTHYGELKALKYQDSRF 474
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF TL PTYR+LWG G SNAL IA+ +G D +I+++A+ V E Q
Sbjct: 475 ENASVEFDEATLAPTYRLLWGIPGRSNALMIARRLGLDLEIVEQAKSKVGGYAEEINQ-- 532
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ L +R++ E++A+ A L E Y EI +AK L +R LK +TQ +Q+
Sbjct: 533 ---VIAGLEAQRKEQENKAQAANQLLQETERFYGEISAKAKALQQREQELKLAQTQAMQE 589
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
L+ AK +I V++ + ++ +++ + I D+ +
Sbjct: 590 ALSQAKAEIAQVIRTLQQ------GEQTAQNAQKARGNLETIA-----DNYLNTQAKPQR 638
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
++ PQ GE++ + SLG + A V+ P + V++G M++ V ++I + K + A
Sbjct: 639 TYQPQVGEKIKIPSLG-QTAEVLTNPDAQGELTVRFGLMKMTVNLSDIESLDGKKAQPPA 697
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWE 786
P+ + + + V+T+ N+LD+RG RV +A +LD A+A
Sbjct: 698 KTTPKAPPPKPSKIT---------------VRTTANTLDIRGARVADAEIELDRAIAQNT 742
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYIK 835
+L++IHG G+G ++E V E L+ HP+V K+E +P N G T+AY+K
Sbjct: 743 DYQILWIIHGKGSGKLREGVHEFLKQHPQVEKFEL-APQNEGGAGVTLAYLK 793
>gi|113476819|ref|YP_722880.1| recombination and DNA strand exchange inhibitor protein
[Trichodesmium erythraeum IMS101]
gi|110167867|gb|ABG52407.1| MutS2 family protein [Trichodesmium erythraeum IMS101]
Length = 857
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 298/894 (33%), Positives = 470/894 (52%), Gaps = 122/894 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
+G IP ++ E+ LL QT L + Q L IEDI+G L + G
Sbjct: 27 LGAVTASHLSIPLTRT--ETIHLLAQTQEVYKLETLLVQGLSFDGIEDISGSLKRSELGG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+LS E+ A+ TL V +KL A + +S S L EL+ + ELE++I
Sbjct: 85 ILSGYELLAIATTLAGV----RKLRRAID-SYESEYELSVLPELVADMRTYPELEQEIHR 139
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
CID + + DRAS L IR + R + +D++L+ + + +A I +P+IT+R R
Sbjct: 140 CIDDRGDVT-DRASPKLAGIREKIHRLRDRIDNILRGILQR--KANAIQQPIITQRDDRF 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
+ +KA K +P GI + S++G+T ++EP V NN +L EE AI LT
Sbjct: 197 VIPVKAPQKDAVP-GIVHDTSTTGSTLYIEPNAVVNLNNQMRQLQRQAQREEEAIRQALT 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
++A+ + ++ L+ IDLA ARA ++ W++ P + + + + + ++HP
Sbjct: 256 QKVAEVKEDLDQLLAITTIIDLATARARYSLWLEATPPQFTD---LDSEQPMTMGQLRHP 312
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LL+ + + +NS VPID+KV RVV ITG
Sbjct: 313 LLVWQQ--------------QYEQKNS--------------VVPIDVKVRPPVRVVAITG 344
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT ++KTLGLA+LM+K GL++PA + +LPWF+ ILADIGD QSLEQ+LSTFSGH
Sbjct: 345 PNTGGKTVTLKTLGLAALMAKVGLFIPANDPVKLPWFEQILADIGDEQSLEQSLSTFSGH 404
Query: 419 ISRIVDILE--------LVSRE-------------------------------------- 432
I RI+ ILE ++S++
Sbjct: 405 IRRIIRILEAIDVSKANIISQKLKVKTQNSKVIDSDDFSENENNSEIDNLSGNENLESSN 464
Query: 433 ---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+LVL+DE+G+GTDP+EG ALA S+LQYL D L V TTH+ +L LK +D RFENA
Sbjct: 465 LSSTLVLLDEVGAGTDPTEGSALAISLLQYLADNALLTVATTHFGELKALKYEDERFENA 524
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF +L+PTYR+LWG G SNA+ IA +G + II RAQ V + Q
Sbjct: 525 SVEFDSNSLQPTYRLLWGIPGRSNAMTIAGRLGLKQDIIDRAQDYVGDSSEDVNQ----- 579
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ L E+R+K E++A+ A++L E L++E+ +A L R LK + VQ+++
Sbjct: 580 VIAGLEEQRQKQETKAKEASALLQETESLHQEVARKASALKERERELKLAQEVAVQEKIA 639
Query: 610 FAKVQIDTVVQDFEN---QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
AK +I V+++ + R+A +++ +AI I E + P +
Sbjct: 640 EAKAEIARVIRNLQQGPLTARNA---------QKATNAINEISEKYLPS---ATPPPKKP 687
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP--NSKRKN 724
F P+ G+++ + +G ++A V+ P ++D + V++G M++ V N+R + + +R
Sbjct: 688 GFMPKEGDRIRIPKIG-QIAEVLSAPNENDELTVKFGVMKMTV---NLREVESLDGERVE 743
Query: 725 AANPAPRLRKQQEDR-QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALA 783
+ L Q+ + +S S + + +S G V+TS+NS+D+RG RV +A ++D AL+
Sbjct: 744 SFKKNKNLESQRSKKVESKSKETPPKVSSNGLAVRTSQNSIDIRGSRVADAQFEVDRALS 803
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+L++IHG GTG +++ + E L+ HP V +YE + G T+A++K
Sbjct: 804 KAIEYGLLWIIHGKGTGKLRQGIHEFLQEHPLVERYELAARNDGGSGVTIAHLK 857
>gi|172036803|ref|YP_001803304.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. ATCC 51142]
gi|354554613|ref|ZP_08973917.1| MutS2 protein [Cyanothece sp. ATCC 51472]
gi|171698257|gb|ACB51238.1| DNA mismatch repair protein [Cyanothece sp. ATCC 51142]
gi|353553422|gb|EHC22814.1| MutS2 protein [Cyanothece sp. ATCC 51472]
Length = 817
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 280/862 (32%), Positives = 440/862 (51%), Gaps = 116/862 (13%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQLLSPSEICAV 68
+P SL+ES++LL QT + Q+ + + I D+ L A LS E+ +
Sbjct: 35 LPIPTSLQESKELLAQTQEIYGLEQNLEIKWTFEGITDVGDSLTRATLKGNLSGQELLNI 94
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
TL + + + + + +L P+L +L+ + ELE+ I CID + +
Sbjct: 95 ATTLAGMRRLRRIIDDCEDL---------PVLTDLVADIRTYPELEKAIHHCID-EAGKV 144
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS L IR K + + L+ + Q + G I + +IT+R R + +KA K
Sbjct: 145 ADRASPKLGEIRHNLKEIRDRIYEKLQNIMQQ--KGGAIQETVITQRGDRFVLPVKAGQK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S +G T+++EP V+ N + E EE AIL LT ++A+ +
Sbjct: 203 EQIP-GIIHDTSGTGGTFYIEPNSVVQMGNKRRQYLRQEEREEEAILRSLTEQVAEVAED 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++YL+ +DLA ARA ++ W+ G P + +I + + HPLL+
Sbjct: 262 LEYLLAIATVLDLATARARYSFWLGGNAP-----RFIEDTETITLRQLHHPLLV------ 310
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+P+ VPI++++ + RV+ ITGPNTGGKT +
Sbjct: 311 WQERHEQGSPV----------------------VPINVQINPDIRVIAITGPNTGGKTVT 348
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GLA+LM+K GL++PAK LPWF+ ILADIGD QS+EQNLSTFSGHI RIV ILE
Sbjct: 349 LKTVGLAALMAKVGLFVPAKEPVELPWFEQILADIGDEQSIEQNLSTFSGHIRRIVRILE 408
Query: 428 LVS-------------------------RESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
+ SL+L+DE+G+GTDP+EG ALA ++L +L D
Sbjct: 409 ALEGTGDPPLTNGGGEQKTVLSETPHTPHPSLILLDEVGAGTDPAEGSALAIALLHHLAD 468
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
L + TTHY +L LK +D+RFENA+ EF TL PTYR+LWG G SNAL+IA+ +G
Sbjct: 469 HAQLTIATTHYGELKALKYEDSRFENASVEFDDRTLSPTYRLLWGIPGRSNALSIAQRLG 528
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
D II A+ + L + +++ L +RR+ E +A+ A L E Y E+
Sbjct: 529 LDVDIIDEAKTRIGGLSQD-----VNDVIAGLEAQRREQEEKAQEAQKLLQETEKFYTEV 583
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
++A L +R LK + Q+VQ+ + AK +I V++ + + + +++
Sbjct: 584 SEKATALQQREQDLKRYQEQEVQKAIAEAKEEIAQVIRSLQKGKKSSQK------AQQAT 637
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
AI I + P S+ PQ GE++ + +LG + A V+ V +D+ V+V++
Sbjct: 638 EAITNISQRQLPK-----KAKPKVSYQPQVGEKIRLSNLG-QTAEVLAVSPEDEEVMVRF 691
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAA-------NPAPRLRKQQEDRQSGSAGSSNEEASYGP 755
G M++ V +I + K + P P+ K ++ P
Sbjct: 692 GLMKMTVSFKDIESLDGQKVETKVKEKKQPITPPPQPSKPKDV----------------P 735
Query: 756 RVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
++TS+N++D+RG RV EA L+ A+A VL++IHG GTG +++ V E L+ HP+
Sbjct: 736 AIRTSRNTIDIRGSRVAEAEADLENAIAQATESGVLWIIHGKGTGKLRQGVHEFLKGHPQ 795
Query: 816 VAKYEQESPM--NYGCTVAYIK 835
+ ++E S G T+AY K
Sbjct: 796 IHRFELASQKEGGSGVTLAYFK 817
>gi|434391179|ref|YP_007126126.1| MutS2 protein [Gloeocapsa sp. PCC 7428]
gi|428263020|gb|AFZ28966.1| MutS2 protein [Gloeocapsa sp. PCC 7428]
Length = 804
Score = 404 bits (1038), Expect = e-109, Method: Compositional matrix adjust.
Identities = 287/855 (33%), Positives = 458/855 (53%), Gaps = 97/855 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQ 58
+G + QIP +S ++S+ LL QT A + S L I+DI L
Sbjct: 27 LGATAARNLQIP--QSQKQSEALLAQTQEAYQLENSLTGGLSFDGIQDIGDALTRVQRQG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
+L+ E+ A+ TL + + + ++ P+L L+++ E+E++I
Sbjct: 85 ILTGEELLAIATTLAGTRQLRRAIDNQPDV---------PVLSALVEDIRTYPEIEQEIH 135
Query: 118 FCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITK 173
CID + + DRAS L IR+ R + + L ++L++ QA + + LITK
Sbjct: 136 RCIDERGQVS-DRASTTLSNIRSSLRQIRSQITQKLQNILQR------QANAVQEQLITK 188
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R R + +KA K +P GI + S+SGAT ++EP V N +L+ E AEETAI
Sbjct: 189 RGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSVVPLGNQLRQLTVKEQAEETAI 247
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L+ +IA ++++L+ +DLA ARA ++ W+ P + +I +
Sbjct: 248 RRQLSEQIAAVTPDLEHLLSVATILDLACARARYSYWLKANPPRFIQRGE---GETITLR 304
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
+ HPLL+ A VP+D+ ++ + RV
Sbjct: 305 QLHHPLLVWQFAHEQGTAV----------------------------VPVDLVIKPQIRV 336
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
V ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LS
Sbjct: 337 VTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPWFDQVLADIGDEQSLQQSLS 396
Query: 414 TFSGHI---SRIVDILE----LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
TFSGHI SRI+D L L SLVL+DE+G+GTDP+EG ALA ++LQYL D L
Sbjct: 397 TFSGHIRRISRIIDALSNTQALTPHSSLVLLDEVGAGTDPAEGSALAIALLQYLADHTQL 456
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
++ TTH+ +L LK +D RFENA+ EF E+L PTYR+LWG G SNAL IA+ +G + +
Sbjct: 457 SIATTHFGELKALKYQDERFENASVEFDEESLSPTYRLLWGIPGRSNALTIARRLGLNAE 516
Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
++++A+ + + Q + L +RR E++A A L ++ LY E+ +A
Sbjct: 517 VVEQAKTKIGGATEDVNQ-----VIAGLEAQRRLQETKAAEAEQLLQQVQRLYTEVSQKA 571
Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
L R AHL+ ++ Q +QQ L AK +I V++ +L+ S ++ +++ +A+
Sbjct: 572 AQLQEREAHLRQQQEQSIQQALVQAKSEIAQVIR----RLQQGSTTAQDA--QQATNALT 625
Query: 647 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
I + H F PQ G+++ + L ++ A V+ P +D + V++G M+
Sbjct: 626 QIAKNH-----LPPPPKPKPGFKPQVGDRIRIPRL-EQTAEVISAPDEDGELSVRFGIMK 679
Query: 707 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR----VQTSKN 762
+ VK +I + K A P ++ +E ++ S ++A P+ ++TS+N
Sbjct: 680 MNVKLEDIESLDGQK----AEPVTTKKQVKETPRN----SPKQDAPTTPQSALAIRTSQN 731
Query: 763 SLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
++DLRG RV +A L+ A+A + R L++IHG GTG +++ V L+ +PRV ++E
Sbjct: 732 TIDLRGSRVADAEIVLERAIAQAQGR--LWIIHGHGTGKLRQGVHTFLQQNPRVNRFEPA 789
Query: 823 SPMN--YGCTVAYIK 835
+P + G TVAYI+
Sbjct: 790 APEDGGTGVTVAYIE 804
>gi|428200893|ref|YP_007079482.1| MutS2 family protein [Pleurocapsa sp. PCC 7327]
gi|427978325|gb|AFY75925.1| MutS2 family protein [Pleurocapsa sp. PCC 7327]
Length = 824
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 291/878 (33%), Positives = 454/878 (51%), Gaps = 125/878 (14%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLST------IEDIAGILNSA 54
+G + +IP K+ ES +LL QT + Q DL T I DI L A
Sbjct: 27 VGAVAARNLEIPTTKT--ESLQLLAQTKEVYQLEQ----DLETGWSFDGIADIGESLERA 80
Query: 55 VSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEE 114
G +LS E+ + TL V + + + D+ + L EL+ E+E+
Sbjct: 81 KLGGMLSGQELLDIATTLAGVRRLRRVI--------DNREDIPVLTELVAEIRTYPEIEQ 132
Query: 115 KIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI-FQAGGIDKPLITK 173
+I CID + DRAS L IRA K E DS+ +K+ + + Q G + +P+IT+
Sbjct: 133 EIHRCID-DAGKVADRASPKLASIRARLK---EVRDSIYQKLQSILQRQGGAVQEPVITQ 188
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R R + +KA K +P GI + SS+GAT ++EP V N + E AEE AI
Sbjct: 189 RGDRFVIPVKAPQKDQIP-GIIHDTSSTGATLYIEPNAIVNLGNQLRQYRRQEQAEEEAI 247
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS--IN 291
L LT +A E +++YL+ +DLA ARA ++ W++G P + F+ I
Sbjct: 248 LRALTERVAAVESDLEYLLAVATILDLATARARYSLWLEGNAP-----RFIDFEEGEPIT 302
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+ ++HPLL+ + + +DV VPI+++++ +
Sbjct: 303 LRQLRHPLLVWQ----------HQHEQGADV------------------VPINVQIDPKI 334
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ LPWF+ +LADIGD QS+EQ+
Sbjct: 335 RVVAITGPNTGGKTVALKTLGLAALMAKVGLFIPAREPVELPWFEQVLADIGDEQSIEQS 394
Query: 412 LSTFSGHI---------------------------------SRIVDILELVSRESLVLID 438
LSTFSGHI S + ++ + +SL+L+D
Sbjct: 395 LSTFSGHIRRIIRIIDTLKAEFSSSRVQKDPDDNRQAQEWDSEAIGKIQRTNNQSLILLD 454
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDP+EG ALA ++L+YL D L + TTHY +L LK +D+RFENA+ EF TL
Sbjct: 455 EVGAGTDPAEGSALAIALLKYLADNALLTIATTHYGELKALKYQDSRFENASVEFDDRTL 514
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
PTYR+LWG G SNAL IA+ +G ++I++ A+K V E Q L +R
Sbjct: 515 SPTYRLLWGIPGRSNALAIAQRLGLGQEIVEEARKRVGGYSEEINQ-----TIAGLEAQR 569
Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
R+ E +A+ A+ L + Y EI ++A L R LK + ++VQ+ + AK +I V
Sbjct: 570 REQELKAKEASQLLQQTERFYTEISEKAASLQERERELKQYQEREVQKAIAQAKAEIAKV 629
Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHV 678
++ QL+ S N+ +++ AI I E P E ++S++ P+ GE++ +
Sbjct: 630 IR----QLQQGSPTAQNA--QKATEAIGQIAETRLPK-----PEKHSSNYLPKVGERIRL 678
Query: 679 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQED 738
+LG + A V+ + D+ V V++G M++ V I + K + +
Sbjct: 679 PNLG-QTAEVLNLA--DEEVTVRFGLMKMTVPLTEIESLDGKK----------VEIPAKP 725
Query: 739 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMG 798
R + V+TS+N++DLRG RV EA +L+ A++ VL++IHG G
Sbjct: 726 RAVPPPPAQPATPKPPVTVRTSQNTIDLRGSRVAEAESELERAISKATESGVLWIIHGKG 785
Query: 799 TGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 834
TG +++ + E L++HP+V ++E ++ G T+AY+
Sbjct: 786 TGRLRQGIHEFLQHHPQVERFELALQNEGGAGVTIAYL 823
>gi|218441797|ref|YP_002380126.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 7424]
gi|218174525|gb|ACK73258.1| MutS2 family protein [Cyanothece sp. PCC 7424]
Length = 803
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 292/856 (34%), Positives = 454/856 (53%), Gaps = 104/856 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
+G Q ++P K EES +LL QT + + L I DI L A G
Sbjct: 29 LGAIAAQYMRLPDTK--EESCQLLAQTEEVYDLENRLNTKLSFDGISDIGDALERADLGG 86
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIG 117
LLS E+ ++ TL V + + + E E+ P+L EL+ + E+E+ I
Sbjct: 87 LLSGKELLSIATTLAGVRRLRRIIEEQEEI---------PVLKELVADVRTYPEIEQDIH 137
Query: 118 FCI--DCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLI 171
CI D K + DRAS L IR + R+R L ++++ Q+G I + +I
Sbjct: 138 RCIEEDGK---VSDRASPRLREIRGQIKVVRERIYRKLQDIMQR------QSGAIQESVI 188
Query: 172 TKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEET 231
T+R R + +KA K + GI + SS+GAT ++EP VE N + E EE
Sbjct: 189 TQRGDRFVLPVKAPQKDQI-SGIIHDSSSTGATLYIEPHSVVEQGNQLRQHHRQEQIEEE 247
Query: 232 AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL LT +IA+ + +++YL+ +DLA AR+ ++ W+ P + I
Sbjct: 248 VILRGLTQQIAQVKEDLEYLLAVATTLDLAVARSRYSWWLQANPP-----RFIDSTEPIT 302
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+ ++HPLL+ +N E V VPI+++V+ +
Sbjct: 303 LRQLRHPLLVWQ-------------------QNHEQGVEV---------VPINVQVDPKI 334
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
RVV ITGPNTGGKT ++KT+GLA+LM+KAG+++PAK LPWF+ ILADIGD QSL+Q+
Sbjct: 335 RVVAITGPNTGGKTVTLKTIGLATLMAKAGIFIPAKVPVELPWFEEILADIGDEQSLQQS 394
Query: 412 LSTFSGHISRIVDILELVS----------RESLVLIDEIGSGTDPSEGVALATSILQYLR 461
LSTFSGHI R++ I+E ++ SLVL+DE+G+GTDP+EG ALAT++L+YL
Sbjct: 395 LSTFSGHIRRMIRIIEALNGSSPEETKPPASSLVLLDEVGAGTDPAEGSALATALLKYLA 454
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
D+ L + TTHY +L LK +D RFENA+ EF+ +TL PTYR+LWG G SNAL IA +
Sbjct: 455 DQAQLTIATTHYGELKALKYQDERFENASVEFNDQTLSPTYRLLWGIPGRSNALTIAGRL 514
Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE 581
G +II+ A+ V + Q + L E+RR+ E +A+ A+ L E Y E
Sbjct: 515 GLRPEIIEEARTRVGGFSEDINQ-----VIAGLEEQRREQEQKAKEASKLLQETERFYAE 569
Query: 582 IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKES 641
+ ++A L +R LK + Q++Q+ + AK +I V++ QL+ + N+ +++
Sbjct: 570 VSEKANALQQREKDLKQLQEQEIQKAIAQAKAEIAQVIR----QLQQGNTTAQNA--QKA 623
Query: 642 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
A+ I E P S+ P+ GE+V + LG + A V+ + + + V V+
Sbjct: 624 TDALTQIAERQLPKQKHP-----PISYRPKVGEKVRIPGLG-QTAEVLSLSEESEEVSVR 677
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
+G M++ V +I + K + Q++ + + + + P ++TS+
Sbjct: 678 FGIMKMTVPFTDIESLDGKK----------VETQEKPKPAPANPAPPPPPKSSPVIRTSQ 727
Query: 762 NSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 821
N++D+RG RV EA L+ A+A +L+VIHG GTG +++ V E L+ HP+V + E
Sbjct: 728 NTIDIRGSRVAEAEADLEKAIAKATESGILWVIHGKGTGKLRQGVHEFLQRHPQVKRLEL 787
Query: 822 ESPMN---YGCTVAYI 834
+P N G T+AY+
Sbjct: 788 -APQNEGGSGVTIAYL 802
>gi|284929397|ref|YP_003421919.1| MutS2 family protein [cyanobacterium UCYN-A]
gi|284809841|gb|ADB95538.1| MutS2 family protein [cyanobacterium UCYN-A]
Length = 810
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 280/856 (32%), Positives = 442/856 (51%), Gaps = 97/856 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDL--STIEDIAGILNSAVSGQ 58
MG Q IP + L ESQ+LL+QT + Q + L I DI ++ A G
Sbjct: 27 MGITAAQNPDIP--ELLTESQELLSQTEEVYYLEQDPKIKLIFEGIVDIRDVVKIAALGG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
LS ++ + TL V + K + +L +L++ L+ N ELE+ I +
Sbjct: 85 YLSGKDLLGIAITLDKVRRLRKIVNSYEKLPLFNLKK------LVNNIKTYPELEQTIRY 138
Query: 119 CIDCKLLIILDRASEDLE----LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
C+D I + AS L L+R R + L S++ K +AG I + LIT+R
Sbjct: 139 CVDENGDIT-EHASSKLSKIRLLLRELRNEIYQKLQSIINK------KAGAIQESLITQR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
+R + +K K +P GI + S++G T ++EP V+ N + E EE IL
Sbjct: 192 NNRFVIPVKTLQKDQIP-GIVHDTSNTGMTVYIEPSYIVDIGNKYCQYLRQETIEEIVIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
LT +IA+ +KYL++ + ++DLA ARA ++ W+ G P + +I +
Sbjct: 251 RQLTEKIAEVAESLKYLVEAIQKLDLATARARYSLWLGGNIP-----QFIEEGETIILRK 305
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+ HPLL+ + +G+ VPIDI++ + VV
Sbjct: 306 LYHPLLIWQQKK--------------------------EQGVQ--VVPIDIQINSKINVV 337
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
ITGPNTGGKT ++KTLGLA+LM+K GL++PA + +LPWF +LADIGD QS+ QNLST
Sbjct: 338 SITGPNTGGKTVTLKTLGLAALMAKVGLFIPAVSPVKLPWFKNVLADIGDEQSITQNLST 397
Query: 415 FSGHISRIVDILELVSR----------------ESLVLIDEIGSGTDPSEGVALATSILQ 458
FS HI RI+ IL+ VS SLVL+DE+G+GTDP+EG ALA S+L
Sbjct: 398 FSSHIRRIILILKAVSNSSKSNSSKILNKFKNCSSLVLLDEVGAGTDPTEGSALAISLLS 457
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
+L + L + TTHY ++ LK +D+RFENA+ EF+ +T P+YR+LWG G SNA++IA
Sbjct: 458 HLANHALLTIATTHYGEIKALKYRDSRFENASVEFNDQTFSPSYRLLWGIPGRSNAISIA 517
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
+++G D I+Q A+ +V Q +++ L E+R K E +A A L + +
Sbjct: 518 QNLGLDLNILQAARNIV-----GEQSKDVNDIILGLEEQRNKQELKANEAQELLKQAKNF 572
Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
Y E+ D+A L R LK + +++Q+ ++ AK +I V++ + D+ +
Sbjct: 573 YTEVSDKAVILKEREQELKHFQEKEIQKAISSAKEEIAQVIRHLQ------QGDKTSQKA 626
Query: 639 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 698
++ I I + P + SS+ P+ GE+V + G A V++V D V
Sbjct: 627 LQATKEILNISKEKLPQ-----VKKEYSSYCPKIGEKVKITKFGQN-AQVLDVIADSQEV 680
Query: 699 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 758
+V++G M +++ +I + K A + Q++D Q+ G+ + ++
Sbjct: 681 VVRFGLMTMKILFTDIESLDGLKVDKL--KAKKQSVQRQDIQAIDVGNQYD-------IR 731
Query: 759 TSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 818
T N+LD+RG R+ EA L+ A+A + VL++IHG GTG +++ V E L+ HP+V
Sbjct: 732 TDNNTLDIRGTRIFEAEISLEKAIAQATNIGVLWIIHGKGTGKLRQGVHEFLKIHPQVKD 791
Query: 819 YEQESPMNYGCTVAYI 834
++ S G V +
Sbjct: 792 FKLASQNEGGSGVTLV 807
>gi|427723948|ref|YP_007071225.1| MutS2 protein [Leptolyngbya sp. PCC 7376]
gi|427355668|gb|AFY38391.1| MutS2 protein [Leptolyngbya sp. PCC 7376]
Length = 801
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 269/831 (32%), Positives = 445/831 (53%), Gaps = 79/831 (9%)
Query: 13 FGKSLEESQKLLNQTS--AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
F S ES+ LL QT L + I +++ L A G ++S ++ +
Sbjct: 39 FPGSQAESEILLAQTVEITELDAETEGGISFEGIGNVSESLERATIGGIISGQDLLLIAT 98
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
TL V + ++L E +EL+ LL L++ ELE++I CID + + DR
Sbjct: 99 TLAGVRKL-RRLVENSELE------LPQLLFLVEQLRTYPELEKEIHHCIDDRGDVT-DR 150
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
AS L IR + K + + L ++ + G I + +IT+R R + +KA K +
Sbjct: 151 ASPKLAGIREKMKGARDGIYQTLNRIMQR--HGGSIQEAVITQRGDRFVLPVKAGQKEHI 208
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P GI ++SS+G+T+++EPK ++ N + + E E IL LT ++A+ +++
Sbjct: 209 P-GIVHDISSTGSTFYVEPKAIIDLGNRLRQATKQEQREIEIILRQLTEKVAEVVEDLEK 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L+ IDLA AR+ ++ W++ P + + + + HPLL+
Sbjct: 268 LLAIATTIDLATARSRYSHWLEANPPKFTKPEQPTM-----LRKLHHPLLVWQ------- 315
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+ E E+ VPI++++ + +VV ITGPNTGGKT ++KT
Sbjct: 316 --------QKQEEGDEV-------------VPINVQIRPDIKVVAITGPNTGGKTVTLKT 354
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LG+A+LM+K GL++PA LPWF+ +LADIGD QSL+Q+LSTFSGHI R+ I+E +
Sbjct: 355 LGMAALMAKVGLFIPAIAPVELPWFNHVLADIGDEQSLQQSLSTFSGHIRRVGRIIETLQ 414
Query: 431 RE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
E +LVL+DE+G+GTDP+EG ALA ++L+YL D L V TTHY +L LK D RFE
Sbjct: 415 AEDENNLVLLDEVGAGTDPTEGSALAIALLKYLADHAALTVATTHYGELKALKYDDDRFE 474
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF +LRPTY++LWG G SNAL IAK +G D ++I AQ L+ +
Sbjct: 475 NASVEFDEYSLRPTYKLLWGIPGRSNALAIAKRLGLDEQVIDAAQSLLGNSNTD-----V 529
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+E+ +L +RR+ E +++ A +L + Y E+ +A DL RR LK + QQVQ+
Sbjct: 530 NEVIAALEAQRREQEQKSQEAEALLKQTERFYTEVSSKAADLQRRETELKQAQDQQVQEA 589
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
+ AK +I V++ + A ++++ A A+ E + + + +
Sbjct: 590 IAEAKSEIAQVIRTLQKGKPSA---------QKAQKATNALGEI--AQEKLAQPKKKKAG 638
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
+ P+ GE++ + LG + A V+E+ ++ T++ ++G M++ ++ I + K +
Sbjct: 639 YQPKLGEKIRISKLG-QTAEVIELNEENKTLVARFGIMKMSLQWTEIESLQGQKVE---- 693
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACW 785
A + +Q+ ++ S E + V+T N++D+RG R+ +A L+ IA A
Sbjct: 694 -AEPKKTKQKTKKKQQPKQSQEVVT----VRTDSNTIDIRGQRIHQAESSLEGAIARATA 748
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 834
+ V+++IHG GTG ++E V E L++HP++ KY ++ G T+AY+
Sbjct: 749 QGSQVVWIIHGKGTGKLREGVHEFLKHHPQIKKYNIAEQKEGGSGVTIAYL 799
>gi|282900091|ref|ZP_06308048.1| DNA mismatch repair protein [Cylindrospermopsis raciborskii CS-505]
gi|281194973|gb|EFA69913.1| DNA mismatch repair protein [Cylindrospermopsis raciborskii CS-505]
Length = 815
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 284/849 (33%), Positives = 446/849 (52%), Gaps = 92/849 (10%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+P +LEES+ LL QT + ++SQ L I+DI L A LLS E+ A
Sbjct: 35 LPIPSTLEESEGLLCQTKE-VYQLESQLISGLSFEGIQDIGDSLERAELHGLLSSEELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL N+ + + D+ + L +L+ ELE++I CID + I
Sbjct: 94 IATTLAGARNLRRVI--------DNQEDLPILCDLVSQLRTYPELEQEIHHCIDERAQIA 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS+ L IR + ++ + L + ++ + + +IT+R R + +KA K
Sbjct: 146 -DRASQKLSEIREDLRKLRSQITQKLHNIIQ--VKSNALQELIITQRGDRYVLPVKAVQK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S+SGAT ++EP V N + E E AIL +LT ++A+ + +
Sbjct: 203 DAVP-GIVHDSSTSGATLYIEPNSIVSMGNQLRQTLKREQVEIEAILRILTTKVAEVKPD 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS--INIEGIKHPLLLGSSL 305
++ L+ V ID+A A+A ++ W++G P L S SS I + ++HPLL+
Sbjct: 262 LEKLLAIVTTIDVAAAKARYSLWIEGNPPRLIHPSIPGGSSSEIITLRQLRHPLLV---- 317
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+P+ VP+D+ + +VV ITGPNTGGKT
Sbjct: 318 --WQQKHEQGHPV----------------------VPVDLLISPHIKVVTITGPNTGGKT 353
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KTLGLA+LM+K GL++PA+ +PWF +LADIGD QSL Q+LSTFSGHI RI I
Sbjct: 354 VTLKTLGLAALMAKVGLFIPAREPVEIPWFSHVLADIGDEQSLAQSLSTFSGHIRRISRI 413
Query: 426 LELVSRE----------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
L + E SL+L+DE+G+GTDP+EG ALA ++L+YL D L + TTH+ +
Sbjct: 414 LNAIGEERQSSPYQTSHSLILLDEVGAGTDPAEGSALAIALLKYLGDHAQLTIATTHFGE 473
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L LK +D RFENA+ EF+ TL PTYR+LWG G SNAL IA +G ++++ A+ +
Sbjct: 474 LKSLKYEDIRFENASVEFNETTLSPTYRLLWGIPGRSNALAIALRLGLKPEVVENAKSQL 533
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
E Q + L +RR E++A A L + LY+E+ A L+ R
Sbjct: 534 GETTDEVNQ-----VIAGLEAQRRSQETKAAAAQELLKQTEKLYKEVSQRATALEEREKD 588
Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS-ADEINSLIKESESAIAAIVEAHRP 654
L+A + VQ+ + AK +I V++ + A A + L+ E I + ++P
Sbjct: 589 LRASQEIAVQKAITQAKGEIAQVIRQLQQGKPTAQDAQKATKLLTE-------IADKYQP 641
Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
V + F P+ GE+V + LG + A V+ + + V++G M++ V ++
Sbjct: 642 VAPPKVKQ----GFIPEPGERVRIPKLG-QTAQVISAADGNGELTVRFGMMKMTVNLEDV 696
Query: 715 ------RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
+P+ SK K P + Q+++ +GS+ S+ ++TSKN++DLRG
Sbjct: 697 ESLDGEKPLVPSKTK---VPLAVVSGQKQELIAGSSTSTE-----NLEMRTSKNTVDLRG 748
Query: 769 MRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN-- 826
RV +A + LD ++ ++ +++IHG GTG +K+ V E L+ HPRV+ YE S ++
Sbjct: 749 KRVGDAEYILDQVIS--QAAGPVWIIHGHGTGKLKQGVHEFLQQHPRVSHYEAASRVDGG 806
Query: 827 YGCTVAYIK 835
G T+A+IK
Sbjct: 807 TGVTIAHIK 815
>gi|427731199|ref|YP_007077436.1| MutS2 family protein [Nostoc sp. PCC 7524]
gi|427367118|gb|AFY49839.1| MutS2 family protein [Nostoc sp. PCC 7524]
Length = 822
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 283/864 (32%), Positives = 444/864 (51%), Gaps = 117/864 (13%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
QIP +++ S++LL QT + + L ++DI L A +L+ E+ A
Sbjct: 36 QIPTSQAV--SEQLLAQTKEVYQLESRLTPGLSFEGVQDIGDSLERAELQGILAGDELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ TL N+ + + +L P+L EL+ + ELE++I CID + +
Sbjct: 94 IATTLAGARNLRRIIDNQEDL---------PVLNELVADLRTYPELEQEIHRCIDERGQV 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRRSRMCVGIKA 184
DRAS+ L IR E +R L S + + I QA G + + +IT+R R + +KA
Sbjct: 145 T-DRASQKLGEIRTELRR----LRSQITQKLQNILQAKSGAVQEQIITQRGDRFVIPVKA 199
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
K +P GI + S+SGAT ++EP V N + E AEE AI +LT +IA
Sbjct: 200 PQKDAIP-GIVHDTSTSGATLYIEPNSIVPMGNQLRQTVRREQAEEEAIRRILTEQIAAV 258
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ +++ L+ V +DLA ARA ++ W++ P S+ I + ++HPLL+
Sbjct: 259 KPDLERLLAIVTTLDLATARARYSLWLNANPPRFISREEQEI---ITLRQLRHPLLVWQQ 315
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+P+ +P+D+ + +VV ITGPNTGGK
Sbjct: 316 ------HHEQGHPV----------------------IPVDLLISPHIKVVTITGPNTGGK 347
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KTLGLA+LM+K GL++PA+ +PWF+ ILADIGD QSL+Q+LSTFSGHI RI
Sbjct: 348 TVTLKTLGLAALMAKVGLFIPAREPVEMPWFEQILADIGDEQSLQQSLSTFSGHIRRISR 407
Query: 425 ILE--------------------------------LVSRESLVLIDEIGSGTDPSEGVAL 452
IL L + SLVL+DE+G+GTDP+EG AL
Sbjct: 408 ILNALGTDDRGQVTGDREQVTGDRGEEFLLTPHSPLPTPHSLVLLDEVGAGTDPTEGSAL 467
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A ++LQYL D L + TTH+ +L LK +D RFENA+ EF+ TL PTYR+LWG G S
Sbjct: 468 AIALLQYLADHAQLTIATTHFGELKALKYEDARFENASVEFNEATLSPTYRLLWGIPGRS 527
Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 572
NAL IA +G ++I++A+ V E Q + L ++RR+ E++A A L
Sbjct: 528 NALAIALRLGLKPEVIEQAKTQVGEATDEVNQ-----VIAGLEDQRRRQETKAAEAQKLL 582
Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
+ LY+E+ +A L+ R L+A + VQQ + AK +I V++ Q +A
Sbjct: 583 QQAERLYKEVSAKAAALEEREQSLRASQEVAVQQAIAQAKGEIAKVIRRL--QQGTPTAQ 640
Query: 633 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
E +++ +A+ I + ++P + F P+ G+++ + G + A V+ P
Sbjct: 641 E----AQQATNALNQIAQTYQP----AAPPKPKVGFMPKVGDRIRLSKFG-QTAEVLTAP 691
Query: 693 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 752
+D V++G M++ VK +I + K A P + + +
Sbjct: 692 DEDGEFSVRFGIMKMMVKLEDIESLDGQK----AEPVVKPKAAPAAIAAPPQPVLA---- 743
Query: 753 YGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRN 812
++TS+N++DLRG RV +A LD A++ E++ +++IHG GTG +++ V L+
Sbjct: 744 ----IRTSQNTVDLRGKRVADAEILLDKAIS--EAQGQIWIIHGHGTGKLRQGVHTFLQQ 797
Query: 813 HPRVAKYE--QESPMNYGCTVAYI 834
HPRV++YE ++S G T+AYI
Sbjct: 798 HPRVSRYEAAEQSDGGSGVTIAYI 821
>gi|427708044|ref|YP_007050421.1| MutS2 protein [Nostoc sp. PCC 7107]
gi|427360549|gb|AFY43271.1| MutS2 protein [Nostoc sp. PCC 7107]
Length = 796
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 277/837 (33%), Positives = 437/837 (52%), Gaps = 89/837 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
QIP +S+ S++LL QT + + L I+DI + A +L+ E+ A
Sbjct: 36 QIPTSQSV--SEQLLAQTKEVYQLESRLATGLSFDGIQDIGDSIERAELRGILAGDELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL N+ + + D+ + L +L+ + ELE++I CID + I+
Sbjct: 94 IATTLAGARNLRRVI--------DNQEDTPVLTDLVADLRTYPELEQEIHRCIDERG-IV 144
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRRSRMCVGIKAS 185
DRAS+ L IR + +R L S + + I QA + + LIT+R R + +KAS
Sbjct: 145 ADRASQKLGEIRDDLRR----LRSQINQKLHNILQAKSNAVQEQLITQRGDRFVIPVKAS 200
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
HK +P GI + S+SG T ++EP V N + E AEE A+ +LT ++A
Sbjct: 201 HKDAIP-GIVHDSSTSGVTLYVEPSSIVPMGNQLRQTLKREQAEEEAVRRILTEQVAAVT 259
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+++ L+ V +DLA AR+ ++ W+ P ++ + + ++HPLL+
Sbjct: 260 PDLERLLAIVTTLDLAAARSRYSYWLKANPPRFINREEQEI---VTLRQLRHPLLIWQQQ 316
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+G S +P+D+ + +VV ITGPNTGGKT
Sbjct: 317 HE--------------------------QGHS--VIPVDLLISPHIKVVTITGPNTGGKT 348
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KTLGLA+LM+K GL++PA+ +PWFD ILADIGD QSL+Q+LSTFSGHI RI I
Sbjct: 349 VTLKTLGLAALMAKVGLFIPAREPVEMPWFDQILADIGDEQSLQQSLSTFSGHIRRISRI 408
Query: 426 LELVSRE------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
L + E SLVL+DE+G+GTDP+EG ALA ++LQ+L + L + TTH+ +L L
Sbjct: 409 LNALEHEVENQPNSLVLLDEVGAGTDPAEGSALAIALLQHLAEHAQLTIATTHFGELKAL 468
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
K +D RFENA+ EF TL PTYR+LWG G SNAL IA +G ++++ A+ V
Sbjct: 469 KYEDARFENASVEFDEATLSPTYRLLWGIPGRSNALAIALRLGLKPEVVENAKTQVGEAS 528
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
E Q + L +RR+ E++A A L + LY+E+ D+A L+ R L+
Sbjct: 529 DEVNQ-----VIAGLEAQRRRQETKAAEAQKLLQQAERLYKEVSDKAASLEEREKSLRVS 583
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
+ VQQ + AK +I V++ + A +++ +A+ I + ++P +
Sbjct: 584 QEVAVQQAIAQAKGEIAQVIRRLQQGTPTAQD------AQQATNALNQITQKYQP----A 633
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+ F P+ G+++ + G + A V+ P +D + V++G M++ VK +I +
Sbjct: 634 AAAKPKVGFMPKVGDRIRISQFG-QTAEVLTAPDEDGELNVRFGIMKMTVKLPDIESLDG 692
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
K A P +Q + + P ++TSKN++DLRG RV +A +LD
Sbjct: 693 QK----AEPIV--------KQKPTPTPTTPPPQAAPAIRTSKNTVDLRGKRVADAEIELD 740
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 834
A++ E+ +++IHG GTG ++ V LR HPRV+ YE + + G T+A I
Sbjct: 741 KAIS--EANGPIWIIHGHGTGKLRLGVHAFLRQHPRVSSYEPAESADGGSGVTIAQI 795
>gi|282896735|ref|ZP_06304743.1| MutS 2 protein [Raphidiopsis brookii D9]
gi|281198453|gb|EFA73341.1| MutS 2 protein [Raphidiopsis brookii D9]
Length = 814
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 281/851 (33%), Positives = 444/851 (52%), Gaps = 97/851 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+P +LEES+ LL QT + ++SQ L I+DI L A LLS E+ A
Sbjct: 35 LPIPSTLEESEGLLCQTKE-VYQLESQLISGLSFEGIQDIGDSLERAELHGLLSSEELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL N+ + + D+ + L +L+ ELE+++ CID + I
Sbjct: 94 IATTLAGARNLRRVI--------DNQEDLPILCDLVSQLRTYPELEQEVHHCIDERAQIA 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS+ L IR + ++ + L + ++ + + +IT+R R + +KA K
Sbjct: 146 -DRASQKLSEIREDLRKLRSQITQKLHNIIQ--VKSNALQELIITQRGDRYVLPVKAPQK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S+SGAT ++EP V N + E E AIL +LT ++A+ + +
Sbjct: 203 DAVP-GIVHDSSTSGATLYIEPNSIVSMGNQLRQTLKREQVEIEAILRILTTKVAEVKPD 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS----INIEGIKHPLLLGS 303
++ L+ V ID+A A+A ++ W++G P L H S S I + ++HPLL+
Sbjct: 262 LEKLLAIVTTIDVAAAKARYSLWIEGNPPRLI---HPSIPGSSSQIITLRQLRHPLLVWQ 318
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+P+ VP+D+ + +VV +TGPNTGG
Sbjct: 319 Q------KHEQGHPV----------------------VPVDLLISPHIKVVTMTGPNTGG 350
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++KTLGLA+LM+K GL++PA+ +PWF +LADIGD QSL Q+LSTFSGHI RI
Sbjct: 351 KTVTLKTLGLAALMAKVGLFIPAREPVEIPWFSQVLADIGDEQSLAQSLSTFSGHIRRIS 410
Query: 424 DILELVSRE----------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
IL + E SL+L+DE+G+GTDP+EG ALA ++L+YL D L + TTH+
Sbjct: 411 RILNAIGEEIQSSPYQTSHSLILLDEVGAGTDPAEGSALAIALLKYLGDHAQLTIATTHF 470
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
+L LK +D RFENA+ EF+ TL PTYR+LWG G SNAL IA +G ++++ A+
Sbjct: 471 GELKSLKYEDIRFENASVEFNETTLSPTYRLLWGIPGRSNALAIALRLGLKPEVVENAKS 530
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
+ E Q + L +RR E++A A L + LY+E+ A L+ R
Sbjct: 531 QLGGTTDEVNQ-----VIAGLEAQRRSQETKAAAAQELLKQTEKLYKEVSQRATALEERE 585
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS-ADEINSLIKESESAIAAIVEAH 652
L+A + VQ+ + AK +I V++ + A A + L+ E I + +
Sbjct: 586 KDLRASQEIAVQKAITQAKGEIAQVIRQLQQGKPTAQDAQKATKLLTE-------IADKY 638
Query: 653 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+P V + F P+ GE+V + LG + A V+ + + V++G M++ V
Sbjct: 639 QPAAPPKVKQ----GFIPEPGERVRIPKLG-QTAQVISAADGNGELTVRFGMMKMTVNLE 693
Query: 713 NI------RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 766
++ +P+ SK K P + Q+++ + S S+ ++TSKN++DL
Sbjct: 694 DVESLDGEKPLVPSKTK---APLAGVSGQKQELIAASLPSTENL-----EMRTSKNTVDL 745
Query: 767 RGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
RG RV +A + LD ++ ++ +++IHG GTG +K+ V E L+ HPRV+ YE S ++
Sbjct: 746 RGKRVADAEYILDQVIS--QAAGPVWIIHGYGTGKLKQGVHEFLQQHPRVSHYEAASRVD 803
Query: 827 --YGCTVAYIK 835
G T+A+IK
Sbjct: 804 GGTGVTIAHIK 814
>gi|428770493|ref|YP_007162283.1| MutS2 protein [Cyanobacterium aponinum PCC 10605]
gi|428684772|gb|AFZ54239.1| MutS2 protein [Cyanobacterium aponinum PCC 10605]
Length = 803
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 276/855 (32%), Positives = 449/855 (52%), Gaps = 100/855 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQ 58
+G Q IP +L ++ LL QT + + + S I D+ + A G
Sbjct: 27 LGAIASQNLTIP--STLAHTRLLLAQTQEVVTLETDINCNWSFQGIHDVGDGIERAKMGG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+LS E+ + TL V + + + + +L L EL+ N ELE++I +
Sbjct: 85 MLSGEELLNLATTLAGVRKLRRIIDDKNDL--------ITLQELVANIRTFPELEQEIHY 136
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRS 176
CID + I +RAS L AE ++ +++L S +++ I Q G + + +IT+R
Sbjct: 137 CIDDRGEIT-ERASPQL----AEIRQKIKSLRSKIQQTLQGIIQRYGNALQELVITQRGD 191
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R + +KA H ++ GI + SS+G+T ++EPK VE N N E EE IL
Sbjct: 192 RFVLPVKADHSGII-TGIVHDTSSTGSTLYVEPKAVVELGNKLQTSRNQEKREEEKILRA 250
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF--DSSINIEG 294
L+ ++A++ ++++ L+ +DLA ARA ++ W+D P V F SI +
Sbjct: 251 LSEKVAENWQDLEELLAVATTLDLATARARYSLWLDAYPP-----EFVDFADGESITLRQ 305
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
++HPLL+ E S++ +PID+++ ETRVV
Sbjct: 306 VRHPLLVWQERHE---------------EGSQV-------------IPIDVRISPETRVV 337
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
ITGPNTGGKT ++KT+G+ +LM+K GL++PAK+ R+PWF+ +LADIGD QSL+Q+LST
Sbjct: 338 AITGPNTGGKTVTLKTIGMVALMAKVGLFIPAKSPARIPWFNNVLADIGDEQSLQQSLST 397
Query: 415 FSGHISRIVDIL-ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
FSGHI RIV IL E+ SLVL+DE+G+GTDP+EG A+A SIL+YL L + TTHY
Sbjct: 398 FSGHIRRIVRILDEIKENNSLVLLDEVGAGTDPNEGTAIAISILKYLASNNLLTIATTHY 457
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
+L LK D+RFENA+ EF +L+PTYR+LWG G SNA+ IA+ +G + I+ A++
Sbjct: 458 GELKSLKYSDSRFENASVEFDDVSLQPTYRLLWGIPGRSNAITIAQRLGLNDDIVAEAKE 517
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
LV + +EL +L ++R++ E + + A L + Y+++E +A L R
Sbjct: 518 LVGGFSAD-----VNELISALEKQRKEQEDKHQQAQDLLTKTELFYQQVEAKAISLQARE 572
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
LK ++ Q+V + L AK QI+ V++ + + + D AH+
Sbjct: 573 RDLKKEQEQEVHKLLLDAKSQINQVIKGLKQKGSPTAQD------------------AHQ 614
Query: 654 PDDDFSVSETNTSSFTP------------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
++ + TP + GE+V + S+G ++A V+ V ++ + +
Sbjct: 615 ATENL--GKIGDRFLTPIQKSKSKSSYKPKVGERVRILSIG-QVAEVLGVDDSNEQISAR 671
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
+G M++ + +++ + + + P K++ G E S ++TS+
Sbjct: 672 FGLMKMVIPFSDLESLDGKRWEKPETPV----KEKPPVTPGKNPVKTETKSPPTAIRTSR 727
Query: 762 NSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE- 820
NS+D+RG RV A L+ A+A ++++HG GTG +++ V E L +HP+V+ YE
Sbjct: 728 NSVDIRGKRVHLAYPILEKAIASATDMGTVWIVHGKGTGSLRQGVHEFLDSHPQVSHYEL 787
Query: 821 -QESPMNYGCTVAYI 834
+ G TVAY+
Sbjct: 788 APQKEGGAGVTVAYL 802
>gi|428317789|ref|YP_007115671.1| MutS2 protein [Oscillatoria nigro-viridis PCC 7112]
gi|428241469|gb|AFZ07255.1| MutS2 protein [Oscillatoria nigro-viridis PCC 7112]
Length = 874
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 279/837 (33%), Positives = 429/837 (51%), Gaps = 76/837 (9%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L I+DI L A LLS E+ A+ TL + + + DS
Sbjct: 74 LSFEGIQDIGTSLQRAELQGLLSGEELLAIATTLAGARQLRRII--------DSQPDVPT 125
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
L EL ELE++I CID + + DRA+ L IR + ++ + + +L+ +
Sbjct: 126 LQELAAQLRTYPELEQEIHRCIDDRAQVA-DRATPKLAGIRVQMRQLRDRIYQILQGILQ 184
Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ Q+ + + LIT+R R + +KA K +P GI + S+SGAT ++EP V NN
Sbjct: 185 R--QSNAVQEQLITQRSGRFVIPVKAPQKDAIP-GIVHDSSASGATLYVEPHSTVNLNNQ 241
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP-- 276
+L E AEE A+ LT ++A + ++ L+ V +DLA A+A ++ W+ P
Sbjct: 242 MRQLLRQEQAEEEAVRRALTEQVAAVKPDLDRLVVVVTTLDLATAKARYSYWLQANPPKF 301
Query: 277 -------ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
+ + + E ++ LL +LRS +PL + E
Sbjct: 302 IELGEPELAPKNPETEDEEKADEENSENSQLLIPNLRSQITLRQLRHPLLVWQQQHE--- 358
Query: 330 GSLSKGISDFPV-PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
FPV P+D+ + RVV ITGPNTGGKT ++KTLGLA+LM+KAG+++ A+
Sbjct: 359 -------QGFPVVPVDLTIGPHIRVVAITGPNTGGKTVTLKTLGLAALMAKAGMFVAARE 411
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR----------------- 431
LPWFD ILADIGD QSL+Q+LSTFSGHI RI ILE++
Sbjct: 412 PVELPWFDNILADIGDEQSLQQSLSTFSGHIRRISRILEVLHNKSEGESAGEGEENSQFP 471
Query: 432 ---------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
+SLVL+DE+G+GTDPSEG ALA ++L+YL L V TTH+ +L LK +
Sbjct: 472 MPHAQFPMPKSLVLLDEVGAGTDPSEGSALAIALLKYLAQHSLLTVATTHFGELKALKYQ 531
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D+RFENA+ EF +++PTYR+LWG G SNAL IAK +G +I++ AQ V +
Sbjct: 532 DSRFENASVEFDDNSMQPTYRLLWGIPGRSNALTIAKRLGLLPEIVEEAQTYVGGASQDV 591
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
Q + L +RRK E++AR A L + L+RE+ +A L R LK +
Sbjct: 592 NQ-----VIAGLEAQRRKQETKAREATQLLHQTEKLHREVSQKAAALQERERELKIAQEV 646
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
V + + AK +I +++ + S ++ +++ + I + H P
Sbjct: 647 AVNEAIGSAKSEIAQIIRRLQ------SGNQTAQNAQQATETLNQISQKHLPSRQQPAKP 700
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
F P+ G+++ + SLG + A V+ P ++ + V++G M++ VK I + K
Sbjct: 701 --KPGFMPKAGDRIRIPSLG-QTAEVLSGPDANEELSVRFGIMKMTVKLGEIESLDGQKP 757
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR--VQTSKNSLDLRGMRVEEASHQLDI 780
+ A A + Q + + +++E A P ++T+ NS+DLRG RV +A ++D
Sbjct: 758 ETKAQLAKAAAQAQALATAKAKQAASEPAKPNPEIAIRTANNSIDLRGARVSDAEIEIDR 817
Query: 781 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
AL+ VL++IHG GTG ++ V E L NHP+V+++E S G TV Y+K
Sbjct: 818 ALSKAVEYGVLWIIHGKGTGQLRRGVHEFLANHPQVSRFELASQKEGGAGVTVVYLK 874
>gi|354567326|ref|ZP_08986495.1| MutS2 protein [Fischerella sp. JSC-11]
gi|353542598|gb|EHC12059.1| MutS2 protein [Fischerella sp. JSC-11]
Length = 828
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 276/861 (32%), Positives = 435/861 (50%), Gaps = 121/861 (14%)
Query: 19 ESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
ES+ LL QT + + L I+DI L A +L+ E+ A+ TL
Sbjct: 43 ESEYLLTQTKEVYELESRLTTGLSFEGIQDIGDSLERAELQGVLAGEELLAIATTLAGSR 102
Query: 77 NVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
N+ + + +L P+L EL+ ELE++I CID + + DRAS+ L
Sbjct: 103 NLRRIIDNQPDL---------PILTELVAELRTYPELEQEIHRCIDERGQVS-DRASQKL 152
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR E ++ + L + ++ + + +IT+R R + +KA K +P GI
Sbjct: 153 ADIRTELRKLRNQITQKLHNIIQ--VKSNAVQEQIITQRGDRYVIPVKAPQKDAIP-GIV 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SGAT ++EP V N +L E AEE AI LT ++A+ + +++ L+
Sbjct: 210 HDTSASGATLYIEPNSIVPLGNQLRQLVRREQAEEEAIRRALTEQVAEVKPDLEKLLAIT 269
Query: 256 LEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+DLA A+A ++ W+ P ++ Q+ + I + ++HPLL+ A
Sbjct: 270 TTLDLATAKARYSFWLQANPPRFINRQT----NEYITLRQLRHPLLVWQQQHEQGQAV-- 323
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
VP+D+ V+ E +VV ITGPNTGGKT ++KTLGLA
Sbjct: 324 --------------------------VPVDLLVQPEIKVVTITGPNTGGKTVTLKTLGLA 357
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE-- 432
+LM+K GL++PA+ LPWFD +LADIGD QSL+QNLSTFSGHI RI ILE + +
Sbjct: 358 ALMAKVGLFVPAREPVELPWFDQVLADIGDEQSLQQNLSTFSGHIRRISRILEAIDKPLD 417
Query: 433 -----------------------------------SLVLIDEIGSGTDPSEGVALATSIL 457
+LVL+DE+G+GTDP+EG ALA ++L
Sbjct: 418 GELGAPTTDREWGLGAMGRLGDGEKDCTPPHHQSFALVLLDEVGAGTDPAEGSALAIALL 477
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
+YL D L + TTH+ +L LK +D RFENA+ EF TL PTYR+LWG G SNAL I
Sbjct: 478 RYLADHAQLTMATTHFGELKALKYQDERFENASVEFDEATLSPTYRLLWGIPGRSNALAI 537
Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 577
A+ +G ++I++A+ + E Q + L +RR+ E++A A L +
Sbjct: 538 ARRLGLKAEVIEQAKTNLGGSTDEVNQ-----VIAGLEAQRRRQETKAAQAQDLLQQAER 592
Query: 578 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL 637
LY+E+ +A +L R L+A + VQQ + A+ +I V++ + A
Sbjct: 593 LYKEVSAKAANLQEREQTLRASQEIAVQQAIAQARSEIAQVIRRLQQGTPTA-------- 644
Query: 638 IKESESAIAAIVEAHRPDDDF--SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
K+++ A A+ H+ + F + P+ G+++ + LG + A V+ P +D
Sbjct: 645 -KDAQQATNAL---HQIAEKFIPQPPPKPKQGYIPKEGDRIRIPKLG-QTAEVLTAPDED 699
Query: 696 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 755
+ V++G M++ VK ++ + K + A P A + P
Sbjct: 700 GELTVRFGIMKMTVKLEDVESLDGKKAEPVAKAKPT-----------PAATPVTPTQPAP 748
Query: 756 RVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
++TSKN++D+RG RV +A LD A++ E+ +++IHG GTG +++ V L+ HPR
Sbjct: 749 AIRTSKNTVDIRGRRVADAELVLDKAIS--EATGPIWIIHGHGTGKLRQGVHAFLQQHPR 806
Query: 816 VAKYE--QESPMNYGCTVAYI 834
V++YE ++S G TVAY+
Sbjct: 807 VSRYEAAEQSDGGTGVTVAYV 827
>gi|115461374|ref|NP_001054287.1| Os04g0680700 [Oryza sativa Japonica Group]
gi|113565858|dbj|BAF16201.1| Os04g0680700 [Oryza sativa Japonica Group]
Length = 497
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/412 (49%), Positives = 287/412 (69%), Gaps = 23/412 (5%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G A + ++P G+S EES++LL QT+AA + D +ED++ + +A +LL+
Sbjct: 97 GRAACGEGRVPVGRSREESERLLEQTAAAALLPAPL--DFGGVEDVSAAIAAAAGARLLA 154
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
EIC V R++RA V+ +L +E D + Y+PLL+++++C+FLTEL ++I FC+D
Sbjct: 155 VREICGVGRSIRAARRVFDQLKTLSEETPDG-RSYTPLLDIMQDCDFLTELVQRIEFCLD 213
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
L ++LDRAS+ L IR ER++N++ L+SLL+ + +IFQ GGID P++TKRRSRMCVG
Sbjct: 214 YTLSVVLDRASDKLATIRKERRKNIDMLESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVG 273
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KASHK+L+P GI L+ S SGATYFMEP+ A+ NNMEV+LS E AEE AIL LLT+ I
Sbjct: 274 VKASHKHLVPGGIVLSSSGSGATYFMEPRDAIRLNNMEVKLSGDERAEELAILGLLTSSI 333
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS-----SQSHVSFDSSINIEGIK 296
A SE +I++LM ++LE+DLA AR +A W++ V P + +Q + + + S+ IEGI+
Sbjct: 334 ADSEMKIRHLMGKILELDLACARGSYALWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQ 393
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG--ISDFPVPIDIKVECETRVV 354
HPLLL SL + E++ + G LS +S P+P+D++V +TR++
Sbjct: 394 HPLLLEQSLSMVK-------------ESTRVGKGQLSDEHLVSPMPIPLDMQVRNDTRII 440
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
VI+GPNTGGKTA+MKTLGLASLMSKAG++ PAK PRLPWFD +LADIGDHQ
Sbjct: 441 VISGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPWFDQVLADIGDHQ 492
>gi|37523206|ref|NP_926583.1| recombination and DNA strand exchange inhibitor protein
[Gloeobacter violaceus PCC 7421]
gi|35214209|dbj|BAC91578.1| glr3637 [Gloeobacter violaceus PCC 7421]
Length = 790
Score = 390 bits (1002), Expect = e-105, Method: Compositional matrix adjust.
Identities = 282/833 (33%), Positives = 438/833 (52%), Gaps = 90/833 (10%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+PF ++ E+++ L + AL + +S P L + DIA + A G LL+ + AV
Sbjct: 40 LPF-EARSEAERWLQRAEEALRLAESVPGGLAFDGVHDIASDVERAGRGGLLTGEALLAV 98
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
TL A + + + E + + L L+ ELE++I CID +
Sbjct: 99 ASTLAAARRLRRAIEEHS-------GQAEELALLVAEVRTFPELEQEIYRCID-DTGEVA 150
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASH 186
DRASE L +R+ +R L + +++ Q+ Q A + LIT+R R V +K SH
Sbjct: 151 DRASEKLRDLRSGHRR----LRAEIQRTLLQLLQRRANCFQESLITQRGERFVVPVKVSH 206
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ +P GI + S+SG T F+EP ++ N V +E E IL+ L A +A+
Sbjct: 207 RDQVP-GIVHDSSASGQTLFVEPMAVIDTTNRLVEGMRAEQVEIERILAELAALVAERAT 265
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
E+ +L ++++DLA ARA +A W+ V P + + ++HPLL+
Sbjct: 266 ELLHLHRVLVDLDLAAARARYASWLGAVRPRFG-------ERGCGLVQVRHPLLVWQE-- 316
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
P+ VP+D+ V+ R VVITGPNTGGKT
Sbjct: 317 ----RHEQGTPV----------------------VPVDLPVDPAVRAVVITGPNTGGKTV 350
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL LM++AGL++PA++ LPWFD +LADIGD QS+EQNLSTFSGHI RIV IL
Sbjct: 351 TLKTLGLVVLMAQAGLFVPARDPAVLPWFDRVLADIGDEQSIEQNLSTFSGHIRRIVRIL 410
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
++ ++LVL+DE+G+GTDP EG ALA ++L +L +R GL + TTHY +L LK + F
Sbjct: 411 AALTPDALVLLDEVGAGTDPQEGAALARALLVHLAERAGLVLATTHYGELKALKYTQSHF 470
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF L TL PTYR+LWG G SNAL IA+ +G D +++ AQ + E +
Sbjct: 471 ENASVEFDLATLSPTYRLLWGIPGRSNALTIAERLGLDAQVVAVAQASLSEGDVELDR-- 528
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ +L E+ + E Q R+ L E+ L ++ + LD R A L+A++ QQV++
Sbjct: 529 ---VIGALQEQLQIQEEQVRSTTRLRGEVERLQSDLLRQQVLLDAREAALRARQDQQVRE 585
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
+ A+ ++ V++ + D +++ A+ A+ EA+ ++ + +E
Sbjct: 586 VVAEARAEVAQVIRTLQR------GDATAQQAQQASEALKAVGEAYLGEESAAPAE---- 635
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
+ PQ G++V + LG ++ V+ P + D V VQ G +++ V P S+ +
Sbjct: 636 -YRPQPGDKVEIVPLG-QMGEVLSPPDNGDQVRVQVGILKLTV--------PASQLRRPG 685
Query: 727 NPA--PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALAC 784
+PA P+ R Q E + S P V+T ++DLRG RV EA L+ L
Sbjct: 686 SPATRPKPRPQAEVPRPPSPPKQE------PLVRTEAQTIDLRGRRVAEAEALLEPELN- 738
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L++IHG GTG +++ + EIL HPRVA++E + G TV ++K
Sbjct: 739 -RQSGPLWIIHGHGTGKLRDGIHEILERHPRVARFEFADRTEGGNGVTVVFLK 790
>gi|220908146|ref|YP_002483457.1| recombination and DNA strand exchange inhibitor protein [Cyanothece
sp. PCC 7425]
gi|219864757|gb|ACL45096.1| MutS2 family protein [Cyanothece sp. PCC 7425]
Length = 818
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 278/853 (32%), Positives = 438/853 (51%), Gaps = 99/853 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLS--TIEDIAGILNSAVSGQLLSPSEICAV 68
+P S ESQ L+ QT + + P LS I D+ L A G LL+ E+ +
Sbjct: 37 LPIPTSEAESQMLMQQTQEVYTLENASPTSLSFEGIYDLTHALERAGLGGLLTAVELSQI 96
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
TL A N+ + + Q PLL +L+ ELE++I CID +
Sbjct: 97 ASTLAAARNLRRTIER---------QPDCPLLSQLVTPLRTYPELEQEIHRCID-DAGEV 146
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS L IR +++ + + +L+ + + +A + + +IT+R R + +KA K
Sbjct: 147 ADRASAKLTDIRDRQRQVRQQIQRILQDILQR--KANALQEAVITQRSDRFVIPVKAPQK 204
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + SSSGAT ++EP+ + NN +L+ E E AIL L+ ++ + +
Sbjct: 205 DAIP-GIVHDSSSSGATLYIEPQSTINLNNQLRQLARQEQTEVEAILRQLSQQVGAVQAD 263
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V +DLA AR+ ++ W++G P V + I + ++HPLL+
Sbjct: 264 LEQLLQIVTHLDLAAARSRYSTWLEGNRPHFIK---VHSNDKITLRQLRHPLLVWQQRHE 320
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
A P+ VPID+ + +TRVVV+TGPNTGGKTAS
Sbjct: 321 QGA------PV----------------------VPIDLSIHPQTRVVVMTGPNTGGKTAS 352
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGL +LM+KAGL++PA+ LPWF+ ILADIGD QSL+Q+LSTFSGHI I IL+
Sbjct: 353 LKTLGLTALMAKAGLFIPAREPVELPWFEQILADIGDEQSLQQSLSTFSGHIRCISQILD 412
Query: 428 LVS-----------------------RESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
+ ++LVL+DE+G+GTDP+EG ALA ++L YL D
Sbjct: 413 ALDDPNADPSASLMENGHDHISSDSLAQALVLLDEVGAGTDPTEGTALAIALLHYLADHT 472
Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
L V TTH+ +L LK +D RFENA+ EF +L PTYR+LWG G SNAL IA+ +G +
Sbjct: 473 YLTVATTHFGELKALKYQDQRFENASVEFDEASLAPTYRLLWGIPGRSNALAIARRLGLN 532
Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 584
+++ A+ + R+ +++ L +R++ E++++ AA L A+ L+RE+E
Sbjct: 533 ERVLTAAETELG----GRKTEDVNQVIAGLEAQRKQQETRSQAAAELLAQTERLHRELEQ 588
Query: 585 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 644
+A L R L+ ++ Q VQQ + AK ++ +++ + A + + + +
Sbjct: 589 KAAQLQAREQTLRQQQEQTVQQAIATAKAEVARIIRQLQQGQTAQDAQQASQALDQ---- 644
Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
+ + P S F PQ G++V + SLG + A V+ P D + V++G
Sbjct: 645 ---VATEYLPSRKQPTSPPPKPGFRPQLGDRVRIPSLG-QTAEVITAPNVDGELTVRFGL 700
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
M++ + I + K E + P ++TS+N++
Sbjct: 701 MKMNLNLTEIESLTGEK--------------AEPLPKAKPAAPPPPPPPTPTLRTSQNTI 746
Query: 765 DLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 824
DLRG RV +A LD A+ S L++IHG GTG +++ V E L+N+ RV ++E P
Sbjct: 747 DLRGSRVADAEMTLDQAIGN-TSSGALWIIHGYGTGKLRQGVHEFLKNNSRVDRFEFAEP 805
Query: 825 MN--YGCTVAYIK 835
+ G T+AY+K
Sbjct: 806 ADGGQGVTIAYLK 818
>gi|434407615|ref|YP_007150500.1| MutS2 family protein [Cylindrospermum stagnale PCC 7417]
gi|428261870|gb|AFZ27820.1| MutS2 family protein [Cylindrospermum stagnale PCC 7417]
Length = 814
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 277/871 (31%), Positives = 442/871 (50%), Gaps = 119/871 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
+G ++ +IP +S ES++LL QT + + L I+DI L A
Sbjct: 27 LGAIAARQLKIP--ESQAESEQLLAQTKEVYQLESRLTPGLSFEGIQDIGDSLERAERSG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIG 117
+L+ E+ A+ TL N+ + + +L P+L EL+ + ELE++I
Sbjct: 85 ILTGDELLAIATTLAGARNLRRVIDNQEDL---------PILNELVADLRTYPELEQEIH 135
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRR 175
CID + + DRAS+ L IR + +R L S + + I QA G + + LIT+R
Sbjct: 136 RCIDERAQVT-DRASQKLGEIRLDLRR----LRSQITQKLQNIIQAKSGAVQEQLITQRG 190
Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
R + +KA K +P GI + S+SGAT ++EP V N ++ E EE AI
Sbjct: 191 DRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPHSVVPIGNQLRQVIRKEQTEEEAIRR 249
Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
LT ++A + +++ L+ +DLA A++ ++ W+ P + IN+ +
Sbjct: 250 ALTEQVAAVKPDLERLLAIATSLDLATAKSRYSFWIGANPPRFIQRQDQEI---INLRHL 306
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
+HPLL+ P+ VP+D+ + + RVV
Sbjct: 307 RHPLLVWQQ------QHEQGQPV----------------------VPVDLFISPQIRVVT 338
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LSTF
Sbjct: 339 ITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEIPWFDKVLADIGDEQSLQQSLSTF 398
Query: 416 SGHISRIVDILE------------------------LVSRESLVLIDEIGSGTDPSEGVA 451
SGHI RI ILE L +SLVL+DE+G+GTDP EG A
Sbjct: 399 SGHIRRISRILEALGDNSSVTGNEEDSEQLPITHYPLPITKSLVLLDEVGAGTDPVEGSA 458
Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
LA ++LQYL + L + TTH+ +L LK ++ RFENA+ EF TL PTYR+LWG G
Sbjct: 459 LAIALLQYLANHAQLTIATTHFGELKALKYENERFENASVEFDESTLSPTYRLLWGIPGR 518
Query: 512 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
SNAL IA +G ++I++A+ V E + + L +RR+ E++A A L
Sbjct: 519 SNALTIALRLGLKPEVIEQAKTQVGEATDE-----VNLVIAGLEAQRRRQETKAAEAQDL 573
Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-----QL 626
+ LY+E+ +A DL R L+ + VQQ + AK +I V++ + Q
Sbjct: 574 LRQAEILYKEVSAKAADLQEREKALRVSQEVAVQQAIASAKSEIAQVIRRLQQGTPTAQE 633
Query: 627 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 686
+ + +N + ++S+ A P + +F P+ G+++ + LG + A
Sbjct: 634 AQQATNALNQIAQKSQPA---------PPPKAKI------AFMPKVGDRIRIPKLG-QTA 677
Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 746
V+ P +D + V++G M++ V+ ++ + K A P + + + +
Sbjct: 678 EVLTAPDEDGELTVRFGIMKMMVQLADVESLDGQK----AEPVVKPKPAPAAVIAPPPPA 733
Query: 747 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERV 806
++TS+N++DLRG RV +A + LD A++ E+ +++IHG GTG +++ V
Sbjct: 734 PA--------IRTSQNTIDLRGKRVADAEYMLDKAIS--EAAGPVWIIHGYGTGKLRQGV 783
Query: 807 LEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L+ HPRV YE + + G T+AY++
Sbjct: 784 HAFLQQHPRVNHYEAAERTDGGSGVTIAYVQ 814
>gi|161353751|ref|NP_484093.2| recombination and DNA strand exchange inhibitor protein [Nostoc sp.
PCC 7120]
Length = 798
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 272/837 (32%), Positives = 433/837 (51%), Gaps = 87/837 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
QIP ++ S++LL QT + + L I DI L + +L E+ A
Sbjct: 36 QIPASQA--ASEQLLEQTKEVYQLESRLASGLSFEGIHDIGDALERSELQGILGGDELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL N+ + + D+ + L EL+ ELE++I CID + +
Sbjct: 94 IATTLAGARNLRRII--------DNQEDIPILTELVAELRTYPELEQEIHRCIDERGQVT 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS L IR E ++ + L+ + ++ + + LIT+R R + +KA K
Sbjct: 146 -DRASTKLGDIRTELRKLRSQITQKLQNILQ--VKSNAVQEQLITQRGDRFVIPVKAPQK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S+SGAT ++EP V N + E AEE AI LT ++A + +
Sbjct: 203 DAIP-GIVHDTSTSGATLYIEPNSVVPMGNQLRQTIRKEQAEEEAIRRALTEKVAAVKPD 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V +D+A ARA ++ W+ P + I + + HPLL+
Sbjct: 262 LERLLAIVTTLDMATARARYSLWLKANPPRFIDRQEQEI---ITLRQLHHPLLVWQQQHE 318
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
A +P+D+ + RVV ITGPNTGGKT +
Sbjct: 319 QGHAV----------------------------IPVDLLISPHIRVVTITGPNTGGKTVT 350
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL- 426
+KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI IL
Sbjct: 351 LKTLGLAALMAKVGLFVPAREPVEMPWFDQVLADIGDEQSLQQSLSTFSGHIRRISRILN 410
Query: 427 -------ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+L + SLVL+DE+G+GTDP+EG ALA ++LQYL D L V TTH+ +L L
Sbjct: 411 ALGTGEQDLETPNSLVLLDEVGAGTDPAEGSALAIALLQYLADHAQLTVATTHFGELKAL 470
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
K +D RFENA+ EF TL PTYR+LWG G SNAL IA +G +++++A+ V
Sbjct: 471 KYEDQRFENASVEFDDATLSPTYRLLWGIPGRSNALAIALRLGLKAEVVEQAKTQVGEAT 530
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
E + + L +RR+ E++A A + + LY+E+ ++A L R LKA
Sbjct: 531 DE-----VNLVIAGLEAQRRRQETKAAEAQKILQQAERLYKEVSNKAAALQEREQSLKAS 585
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
+ VQQ + AK +I V++ +L+ +A ++ +++ + + I + ++ +
Sbjct: 586 QEIAVQQAITQAKGEIAKVIR----RLQQGTATAQDA--QQATNNLHQIAQKYQ----PA 635
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
F P+ G+++ + G + A V+ P +D + V++G M++ VK +I +
Sbjct: 636 PPPKAKPGFVPKVGDRIRISQFG-QTADVLTAPDEDGELTVRFGIMKMTVKLEDIESLDG 694
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
K P P + K + + + A ++TSKN++DLRG RV +A + LD
Sbjct: 695 QK------PEP-ITKAKPAPVTPPPPAQPVLA-----IRTSKNTVDLRGKRVADAEYILD 742
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 834
A++ E+ +++IHG GTG +++ V L HPRV+++E ++S G T+A+I
Sbjct: 743 KAIS--EATGPIWIIHGHGTGKLRQGVHTFLEQHPRVSRHEPAEQSDGGSGVTIAHI 797
>gi|427721207|ref|YP_007069201.1| MutS2 protein [Calothrix sp. PCC 7507]
gi|427353643|gb|AFY36367.1| MutS2 protein [Calothrix sp. PCC 7507]
Length = 828
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 287/879 (32%), Positives = 438/879 (49%), Gaps = 122/879 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
+G + QIP S ES +LL QT + + L I+DI L A
Sbjct: 27 LGAIASRHLQIP--DSQAESIQLLEQTKEVYQLENRLTTSLSFDGIQDIGDALERAELQG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
+L+ E+ A+ TL N+ + + +LD P+L L+ ELE++I
Sbjct: 85 ILTGDELLAIATTLAGARNLRRVIDN--QLD-------CPILTALVAELRTYPELEQEIH 135
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITKRR 175
CID + + DRAS+ L IR + +R L S + + I QA G + + LIT+R
Sbjct: 136 RCIDERGQVT-DRASQKLGEIRTDLRR----LRSQITQKLQNILQAKSGAVQEQLITQRG 190
Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
R + +KA K +P GI + S+SGAT ++EP V N ++ E AEE AI
Sbjct: 191 DRFVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSIVPMGNQLRQVIRKEQAEEEAIRR 249
Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
LT ++A + +++ L+ V +DLA ARA ++ W+ P H I + +
Sbjct: 250 ALTEQVAAVKPDLERLLAIVTTLDLATARARYSFWLGANPPRFI---HRQDQEIITLRHL 306
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
+HPLL+ P+ VP+D+ + RVV
Sbjct: 307 RHPLLVWQQ------QHEQGQPV----------------------VPVDLLISPHIRVVT 338
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LSTF
Sbjct: 339 ITGPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEIPWFDQVLADIGDEQSLQQSLSTF 398
Query: 416 SGHISRIVDILELV---------------SRE----------------------SLVLID 438
SGHI RI IL + SRE +LVL+D
Sbjct: 399 SGHIRRISRILNALGHGEEAALRLRSGQGSREQGAGEQNLELRTPDSVLSTQHSALVLLD 458
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDP EG ALA ++LQYL D LA+ TTH+ +L LK +D RFENA+ EF TL
Sbjct: 459 EVGAGTDPVEGSALAIALLQYLADHAQLAIATTHFGELKALKYEDERFENASVEFDETTL 518
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
PTYR+LWG G SNAL IA +G ++I+ A+ V E Q + L +R
Sbjct: 519 SPTYRLLWGIPGRSNALTIALRLGLKPEVIEHAKTQVGEATDEVNQ-----VIAGLEAQR 573
Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
R+ E++A A ++ + LY+E+ +A+ L R L+A + VQQ + AK +I V
Sbjct: 574 RRQETKATEAQNVLQQAERLYKEVSAKAEALQEREKALRASQEVAVQQAIAQAKTEIAQV 633
Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHV 678
++ + A +++ +A+ I + ++ + + F P+ G+++ +
Sbjct: 634 IRRLQQGTPTAQD------AQQATNALNQIAQQYQ----PAPPPKPKAGFMPKVGDRIRI 683
Query: 679 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQED 738
G + A V+ P +D V++G M++ V +I + K A P
Sbjct: 684 SKFG-QTAEVLTAPDEDGEFSVRFGIMKMTVTLEDIESLDGQK----AEPVV-------- 730
Query: 739 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMG 798
+Q + + A ++TSKN++DLRG RV +A LD A++ E+ +++IHG G
Sbjct: 731 KQKPAPAPVPQPAQPALAIRTSKNTIDLRGKRVADAEFMLDKAIS--EASGPVWIIHGHG 788
Query: 799 TGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 835
TG +++ V L+ HPRV YE + ++ G TVAY++
Sbjct: 789 TGKLRQGVHTYLQQHPRVNNYEAAAQVDGGSGVTVAYVQ 827
>gi|75908863|ref|YP_323159.1| recombination and DNA strand exchange inhibitor protein [Anabaena
variabilis ATCC 29413]
gi|75702588|gb|ABA22264.1| MutS 2 protein [Anabaena variabilis ATCC 29413]
Length = 798
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 271/837 (32%), Positives = 433/837 (51%), Gaps = 87/837 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
QIP ++ S++LL QT + + L I+DI L + +L+ E+ A
Sbjct: 36 QIPASQA--ASEQLLEQTKEVYQLESRLASGLSFEGIQDIGDSLERSELQGILAGDELLA 93
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ TL N+ + + D+ + L EL+ ELE++I CID + +
Sbjct: 94 IATTLAGARNLRRII--------DNQEDIPILTELVAELRTYPELEQEIHRCIDERGQVT 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS L IR E ++ + L+ + ++ + + LIT+R R + +KA K
Sbjct: 146 -DRASTKLGDIRTELRKLRSQITQKLQNILQ--VKSNAVQEQLITQRGDRFVIPVKAPQK 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S+SGAT ++EP V N + E AEE AI LT ++A + +
Sbjct: 203 DAIP-GIVHDTSTSGATLYIEPNSVVPMGNQLRQTIRKEQAEEEAIRRALTEKVAAVKPD 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V +D+A ARA ++ W+ P + I + + HPLL+
Sbjct: 262 LERLLAIVTTLDMATARARYSLWLKANPPRFIDRQEQEI---ITLRQLHHPLLVWQQQHE 318
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
A +P+D+ + RVV ITGPNTGGKT +
Sbjct: 319 QGHAV----------------------------IPVDLLISPHIRVVTITGPNTGGKTVT 350
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL- 426
+KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LSTFSGHI RI IL
Sbjct: 351 LKTLGLAALMAKVGLFVPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSGHIRRISRILN 410
Query: 427 -------ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
E +SLVL+DE+G+GTDP+EG ALA ++LQYL D L V TTH+ +L L
Sbjct: 411 ALGTGDKEEYRPQSLVLLDEVGAGTDPAEGSALAIALLQYLADHAQLTVATTHFGELKAL 470
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
K +D RFENA+ EF TL PTYR+LWG G SNAL IA +G +++++A+ V
Sbjct: 471 KYEDQRFENASVEFDDATLSPTYRLLWGIPGRSNALAIALRLGLKAEVVEQAKTQVGEAT 530
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
E + + L +RR+ E++A A + + LY+E+ ++A L R L+A
Sbjct: 531 DE-----VNLVIAGLEAQRRRQETKAAEAQKILQQAERLYKEVSNKAAALQEREQSLRAS 585
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
+ VQQ + AK +I V++ +L+ +A ++ +++ + + I + ++ +
Sbjct: 586 QEVAVQQAITQAKGEIAKVIR----RLQQGTATAQDA--QQATNNLNQIAQKYQ----PA 635
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
F P+ G+++ + G + A V+ P +D + V++G M++ VK +I +
Sbjct: 636 PPPKAKPGFVPKIGDRIRISQFG-QTADVLTAPDEDGELTVRFGIMKMTVKLEDIESLDG 694
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
K P P ++ + + + A ++TSKN++DLRG RV +A + LD
Sbjct: 695 QK------PEPIVKAKP------APVTPPPPAQPVLAIRTSKNTVDLRGKRVADAEYILD 742
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 834
A++ E+ +++IHG GTG +++ V L HPRV+ +E ++S G TVA+I
Sbjct: 743 KAIS--EATGPIWIIHGHGTGKLRQGVHAFLEQHPRVSHHEPAEQSDGGSGVTVAHI 797
>gi|119512341|ref|ZP_01631426.1| MutS 2 protein [Nodularia spumigena CCY9414]
gi|119462992|gb|EAW43944.1| MutS 2 protein [Nodularia spumigena CCY9414]
Length = 770
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 272/828 (32%), Positives = 419/828 (50%), Gaps = 106/828 (12%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L I+DI L A +L+ E+ A+ TL N+ + + D+ +
Sbjct: 18 LSFEGIQDIGDSLERAELSGILAGDELLAIATTLAGTRNLRRVI--------DNQEDLPT 69
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
L +L+ + ELE++I CID + + DRAS L IR E + + S + +
Sbjct: 70 LADLVADLRTYPELEQEIHRCIDERGQVT-DRASLKLGEIRTE----LRKIRSQITQKLH 124
Query: 159 QIFQA--GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
I QA G + + +IT+R R + +KA K +P GI + S+SGAT ++EP V F
Sbjct: 125 NILQAKSGAVQEQIITQRGDRYVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPNSIVPFG 183
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N + E EE AI LT ++A+ + +++ L+ V +DLA ARA ++ W+ P
Sbjct: 184 NQLRQTIRREQTEEEAIRRSLTQKVAEVKPDLERLLAIVTTLDLATARARYSFWLGANPP 243
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++ + I + ++HPLL+ A
Sbjct: 244 RFINRED---NEMITLRQLRHPLLVWQQQHEHGQAV------------------------ 276
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP+D+ + RVV ITGPNTGGKT S+KTL LA+LM+K GL++PA+ +PWF+
Sbjct: 277 ----VPVDLLISPHLRVVTITGPNTGGKTVSLKTLALAALMAKVGLFVPAREPVEIPWFE 332
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE------------------------ 432
+LADIGD QSL+Q+LSTFSGHI RI IL + +E
Sbjct: 333 QVLADIGDEQSLQQSLSTFSGHIRRISRILNALDQEEESENISLSPDSPHSPHTPHTPHT 392
Query: 433 ---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL+DE+G+GTDP EG ALA ++LQYL + L + TTH+ +L LK +D RFENA
Sbjct: 393 PHSSLVLLDEVGAGTDPVEGSALAIALLQYLANHAQLTIATTHFGELKALKYEDERFENA 452
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF TL PTYR+LWG G SNAL IA+ +G ++I +A+ V E Q
Sbjct: 453 SVEFDESTLSPTYRLLWGIPGRSNALTIARRLGLKPEVITQAKTQVGGATDEVNQ----- 507
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ L +RR+ E++A A SL + LY+E+ ++ L R L+A + VQQ +
Sbjct: 508 VIAGLEAQRRRQETKAAEAQSLLQQAERLYKEVSAKSDALQEREKALRADQEVAVQQAIA 567
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
AK +I V++ + A +++ A+ I + ++P V+ F
Sbjct: 568 QAKGEIAQVIRRLQKGTPKAQD------AQQATDALNQISQKYQP----KVAPKPKVGFM 617
Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 729
P+ G++V + G + A V+ P D V++G M++ VK +I + K + P
Sbjct: 618 PKVGDRVRLSQFG-QTADVLTSPDADGEFSVRFGIMKMTVKLEDIESLDGQKAEPIVKPK 676
Query: 730 PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRS 789
P A + E S P ++TS+N++DLRG RV ++ LD A++ E+
Sbjct: 677 P-----------APAPVTPPEQS-APAIRTSRNTVDLRGKRVADSEIVLDKAIS--EATG 722
Query: 790 VLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L++IHG GTG +++ V L HPRV+ +E +++ G T+A+IK
Sbjct: 723 PLWIIHGHGTGKLRQGVHAFLHQHPRVSHHEPAEQADGGSGVTIAHIK 770
>gi|298491014|ref|YP_003721191.1| MutS2 family protein ['Nostoc azollae' 0708]
gi|298232932|gb|ADI64068.1| MutS2 family protein ['Nostoc azollae' 0708]
Length = 825
Score = 383 bits (983), Expect = e-103, Method: Compositional matrix adjust.
Identities = 276/876 (31%), Positives = 442/876 (50%), Gaps = 123/876 (14%)
Query: 4 AVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
A+V +A +P +LEES++LL QT L + ++ L I+DI L A +LS
Sbjct: 29 AIVARA-LPIPTTLEESKELLAQTKEVYQLESLLTKGLSFEGIQDIGDSLERAELQGILS 87
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
E+ A+ TL N+ + + D+ + EL+ ELE++I CID
Sbjct: 88 GEELLAIATTLAGARNLRRLI--------DNQEDIPIFAELVAELRTYPELEQEIHRCID 139
Query: 122 CKLLIILDRASEDL----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
+ + DRAS+ L E +R R + + L ++++ ++G + +P+IT+R SR
Sbjct: 140 ERAQVT-DRASQKLGEIREYLRKSRGQITQKLHNIIQA------KSGALQEPIITQRGSR 192
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
+ +KA K +P GI + S+SGAT ++EP V N + E AEE AI L
Sbjct: 193 YVIPVKAPQKDAVP-GIVHDTSTSGATLYIEPNSIVSMGNQLRQAIRREQAEEEAIRRSL 251
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
T ++A + +++ L+ V +D+A A+A ++ W+ P ++ I + ++H
Sbjct: 252 TEQVAAVKPDLEKLLAIVTTLDIATAKARYSFWIGANPPRFVNRQEQQI---ITLRQLRH 308
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLL+ +P+ +P+D+ + +VV IT
Sbjct: 309 PLLV------WQQHHEQGHPV----------------------IPVDLLISPHIKVVTIT 340
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT +++TLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q+LSTFSG
Sbjct: 341 GPNTGGKTVTLRTLGLAALMAKVGLFVPAREPVEIPWFDQVLADIGDEQSLQQSLSTFSG 400
Query: 418 HISRIVDILELVSR------------------------------------ESLVLIDEIG 441
HI RI IL + SLVL+DE+G
Sbjct: 401 HIRRISRILNALGTGDRGVGTRDWEMGEMRGDGGDGEGIFLMPNAQCTMPNSLVLLDEVG 460
Query: 442 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
+GTDP EG ALA ++LQYL D L + TTH+ +L LK +D RFENA+ EF+ TL PT
Sbjct: 461 AGTDPVEGSALAIALLQYLADHAQLTIATTHFGELKALKYEDIRFENASVEFNDATLSPT 520
Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 561
YR+LWG G SNAL IA +G ++++ A+ V E Q + L +RR
Sbjct: 521 YRLLWGIPGRSNALAIALRLGLKPEVVEAAKSQVGEATDEVNQ-----VIAGLEAQRRSQ 575
Query: 562 ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQD 621
E++A A L + LY+E+ +A L R L+A + VQQ + AK +I V++
Sbjct: 576 ETKAAEAQELLRQAEKLYKEVSQKATALQEREKDLRASQEVAVQQAIIQAKGEIAEVIRR 635
Query: 622 FENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 681
+ A +E+ S ++ I E ++ + F P+ G+++ ++ L
Sbjct: 636 LQQGKPTAQH------AQEATSKLSEIAERYQ----PTPPPKPKPGFMPKVGDRIRIRKL 685
Query: 682 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 741
G + A V+ P D V++G M++ V+ +I + K + A P P
Sbjct: 686 G-QTAEVLTAPNTDGEFSVRFGIMKMMVQLQDIESLEGQKPEPIAKPKP----------- 733
Query: 742 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGV 801
A + + ++TS+N++DLRG RV +A + L+ A++ E+ L++IHG GTG
Sbjct: 734 --APAVTTPPAPALAIRTSRNTVDLRGKRVVDAEYILEKAIS--EADGPLWIIHGYGTGK 789
Query: 802 VKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+K+ V L HPRV+ +E +++ G T+A+++
Sbjct: 790 LKQGVHAFLHQHPRVSHHEPAEQADGGTGVTIAHVE 825
>gi|427733731|ref|YP_007053275.1| MutS2 family protein [Rivularia sp. PCC 7116]
gi|427368772|gb|AFY52728.1| MutS2 family protein [Rivularia sp. PCC 7116]
Length = 817
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 272/849 (32%), Positives = 433/849 (51%), Gaps = 106/849 (12%)
Query: 19 ESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
ES+ LL QT + + I+D L A +L+ E+ A+ TL +
Sbjct: 43 ESEYLLAQTKEVYELENRLDNGISFEGIQDFGDSLERAELKGILAGDELLAIATTLAGIR 102
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
N+ + + +L+ L EL+ + ELE++I CID + + DRASE L
Sbjct: 103 NLRRLIDNHPDLE--------ILNELVADLRTYPELEKEIHRCIDERGQVT-DRASEKLG 153
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR +++ + L+ + +A + + +IT+R R + +KA K +P GI
Sbjct: 154 DIRNSLRQSRSQITRKLQNIIQ--VKANALQETIITQRSDRFVIPVKAPQKDAIP-GIVH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT ++EP V N +L E EE AI L+ ++A+ + +++ L+
Sbjct: 211 DTSTSGATLYVEPNSIVPMGNQLRQLLRREQVEEEAIRRKLSEQVAEVKLDLEKLLAVAT 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+DLA A+A ++ W+ P S + +I + ++HPLL+
Sbjct: 271 TLDLATAKARYSFWLKANPPRFIQPS----EENITLRELRHPLLVWQ------------- 313
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ + E+ +P+++ + RVV ITGPNTGGKT ++KTLG A+L
Sbjct: 314 --QQHEQGHEV-------------IPVNLVIHPYIRVVTITGPNTGGKTVTLKTLGFATL 358
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR----- 431
M+K GL++PA+ LPWFD +LADIGD QSLEQ+LSTFSGHI RI IL+ VS
Sbjct: 359 MAKIGLFVPAREPVELPWFDRVLADIGDEQSLEQSLSTFSGHIRRISRILDAVSHVKVEE 418
Query: 432 --------------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
SLVL+DE+G+GTDP EG ALA ++L+YL D L + TT
Sbjct: 419 AQTAEKAEQEENTSLPSPTPSSLVLLDEVGAGTDPVEGSALAIALLRYLADNSMLTIATT 478
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
H+ +L LK +D RFENA+ EF TL PTYR+LWG G SNAL IA +G +++++A
Sbjct: 479 HFGELKALKYQDERFENASVEFDEATLSPTYRLLWGIPGRSNALAIASRLGLKPEVVEKA 538
Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
+ + E Q + L +RR+ E +A A L + Y+E+ +A DL+
Sbjct: 539 KDEMGGATDEVNQ-----VIAGLEAQRRRQEEKATQAQDLLQQAERFYKEVSAKAADLEE 593
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA 651
R L+A + VQQ + AK +I V++ + N ++++ A +I
Sbjct: 594 REKSLRASQEIAVQQAIASAKGEIAAVIKRLQQG---------NPTAQDAKKATDSI--- 641
Query: 652 HRPDDDF--SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
++ D F + F P+ GE++ + LG + A V+ P +D V++G M++ V
Sbjct: 642 NKLADRFIPKAEPKPKAGFMPKVGERIRIPKLG-QTAEVLTAPDEDGEFNVRFGIMKMTV 700
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
K ++ + K A P+ + + + + N P ++TSKN++DLRG
Sbjct: 701 KLKDVESLSGEK----AQPSAKAKPAAKIAPAPPPPVENT-----PLIRTSKNTVDLRGR 751
Query: 770 RVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN--- 826
RV +A LD A++ E++ +++IHG GTG +++ V L+ +PR++ YE +P N
Sbjct: 752 RVADAELVLDKAIS--EAQRAIWIIHGHGTGKLRQGVHAYLKQNPRISNYEA-APQNDGG 808
Query: 827 YGCTVAYIK 835
G T+AYIK
Sbjct: 809 TGVTIAYIK 817
>gi|86609812|ref|YP_478574.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558354|gb|ABD03311.1| MutS2 family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 805
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 281/831 (33%), Positives = 445/831 (53%), Gaps = 94/831 (11%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+S +S+ L QT A+ + ++Q L ++ I ++ L A G +LS E+ + TL
Sbjct: 59 QSRADSEAYLEQTEEAIRLDRTQAGGLSMAGIHNLLPALERAERGGILSGEELVQIATTL 118
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
A + ++L + D D L R + L+ ELE++I C++ + + D AS
Sbjct: 119 GAARRI-RRLID----DHDHLPRLQTWVSTLRT---YPELEQEIFRCLE-EHGEVRDSAS 169
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
L +R +++R + L+++ +Q QA + LI +R+ R + +KA+H+ L+
Sbjct: 170 PTLADLRQQQRRQRSQIQEQLQQLMSQYPQA--LQDTLIGQRQGRFVLMVKATHRDLI-R 226
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI---AEETAILSLLTAEIAKSEREIK 249
GI + S+SGAT ++EP VE N R +++ AEE IL+ L+A++A +++
Sbjct: 227 GIVHDSSASGATLYVEPYAVVELGN---RWRETQVQIQAEEERILAALSAQVAAVATDLE 283
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+L ++ +D+A AR ++ W++G P S + + + KHPLLL S
Sbjct: 284 HLQGVMVGLDVALARGRYSLWLEGNRPQFVS-------AGLRLRQAKHPLLLWQS----R 332
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
AA+ S+G VPID + RVVVITGPNTGGKT ++K
Sbjct: 333 AAAP-------------------SEGQGSAVVPIDFTLADSIRVVVITGPNTGGKTVALK 373
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH---ISRIVDIL 426
TLGL LM+KAG++LPA++ P+LPWFD + ADIGD QSL+QNLSTFSGH ISRIV L
Sbjct: 374 TLGLLVLMAKAGIFLPAQDPPQLPWFDGVYADIGDEQSLQQNLSTFSGHIRRISRIVQAL 433
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ +LVL+DE+G+GTDP+EG ALA +L+YL +R L + TTHY +L LK + F
Sbjct: 434 QSAPEPALVLLDEVGAGTDPTEGAALAAGLLEYLSERALLTLATTHYGELKALKYQHPCF 493
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF TL PTYR+LWG G SNAL IA+ + D +I++RAQ+ L+ E Q R
Sbjct: 494 ENASVEFDEVTLAPTYRLLWGIPGRSNALAIAQRLQLDPEILRRAQR---HLQGESQVDR 550
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ L +R +LE +A SLH E+ LY++++ ++ + R A L+ K+ Q++Q
Sbjct: 551 ---VIAGLEAQRAQLEERAAQVGSLHRELESLYQQMQQRSRQIAEREARLEQKQNQELQA 607
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
L A+ ++ ++ + ++ + E +A I + + P E
Sbjct: 608 LLAAARQEVAAAIRRLQQ------GEDPQRITAE----LAQIQQRYSPPPPPVDME---- 653
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
F P+ G++V ++ LG + V+ + G D +V+ G ++ V + + PI + K
Sbjct: 654 -FVPEVGDRVRLRGLG-QTGEVIAIEG--DVYVVRSGILKFTVPRGQLDPIDEHQAKQ-- 707
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWE 786
RQ A + A+ ++TS+N+LDLRG V +A L+ A
Sbjct: 708 ------------RQRPKAPPPSPAATAPLNLRTSQNTLDLRGKTVADAEAILEQHFAQAP 755
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 835
V ++IHG GTG +K V L+NHPRV ++ P + G TVA+++
Sbjct: 756 PGPV-WIIHGHGTGRLKAGVQAYLQNHPRVQRFSAADPEDGGTGVTVAHLQ 805
>gi|86607201|ref|YP_475964.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus sp. JA-3-3Ab]
gi|86555743|gb|ABD00701.1| MutS2 family protein [Synechococcus sp. JA-3-3Ab]
Length = 799
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 275/829 (33%), Positives = 438/829 (52%), Gaps = 94/829 (11%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+S ES+ L+QT A+ + SQP + L I ++ L A G +LS E+ + TL
Sbjct: 57 RSRAESEVCLDQTEEAIRLDCSQPGGISLDGIHNLLPALERAERGGILSGEELVQIATTL 116
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
A + ++L +A E R L E + N ELE++I C+D + + D AS
Sbjct: 117 GAARRL-RRLIDADE-------RLPRLQEWVSNLRTYPELEQEIFRCLD-EHGEVRDSAS 167
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
L +R + ++ + L++V +Q QA + LI +R+ R + +KA+H+ L+
Sbjct: 168 AALADLRRQHRQYRSQIQERLQQVMSQHPQA--LQDTLIGQRQGRFVLMVKATHRDLI-R 224
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI-AEETAILSLLTAEIAKSEREIKYL 251
GI + S+SGAT ++EP VE N +R + ++I AEE IL+ L+A++ ++++L
Sbjct: 225 GIVHDSSASGATLYVEPYAVVELGN-RLRETQAQIQAEEERILAALSAQVGSVAEDLEHL 283
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
++ +++A ARA ++ W+ G P + + + +HPLLL S
Sbjct: 284 QAVMVGLEVALARARYSLWLGGNRPQF-------VPAGLRLRQARHPLLLWQS------- 329
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
+ + + E+ +PID + R VVITGPNTGGKT ++KTL
Sbjct: 330 -------REEGKGPEV-------------IPIDFTLSESIRAVVITGPNTGGKTVALKTL 369
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL LM+KAG++LPA++ P+LPWFD + ADIGD QSL+Q+LSTFSGHI RI I++ +
Sbjct: 370 GLLVLMAKAGIFLPAQDPPQLPWFDGVYADIGDEQSLQQSLSTFSGHIRRISRIVQALQS 429
Query: 432 E---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
E +LVL+DE+G+GTDPSEG ALA +L+YL ++ L + TTHY +L LK + FEN
Sbjct: 430 EPAPALVLLDEVGAGTDPSEGAALAAGLLEYLAEKALLTLATTHYGELKALKYQHPGFEN 489
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF TL PTYR+LWG G SNAL IA+ + + +I++RAQ + L+ E Q
Sbjct: 490 ASVEFDEATLAPTYRLLWGIPGRSNALAIARRLHLEPEILRRAQ---QHLQGESQ---VD 543
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
++ L +R +LE +A SLH E+ LYR+++ ++ + R A L+ ++ Q +Q L
Sbjct: 544 KVIAGLEAQRAQLEERAAQVGSLHQELETLYRQMQQRSRQMAEREAQLEYRQQQGLQALL 603
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
A+ ++ V+ + + +AA +E R T F
Sbjct: 604 AAARREVAAAVRKLQQ--------------GDDPQQVAAELEQIRRRYSPPPPPVET-EF 648
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
P+ G++V ++ LG + V+ V G + +V+ G ++ V + + PI + K
Sbjct: 649 VPEVGDRVRLRGLG-QTGEVIAVEG--EVYVVRSGILKFTVPRGQLDPIDEHQAKQ---- 701
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESR 788
RQ A S + ++TS+N+LDLRG V +A L+ A
Sbjct: 702 ----------RQRPKAPPSPPPTTAPLNLRTSRNTLDLRGKTVADAEAILEQHFAQAPPG 751
Query: 789 SVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 835
V ++IHG GTG ++ V L+NHPRV ++ P + G TVA+++
Sbjct: 752 PV-WIIHGHGTGRLRAGVQAYLQNHPRVQRFAPADPQDGGTGVTVAHLR 799
>gi|443327052|ref|ZP_21055687.1| MutS2 family protein [Xenococcus sp. PCC 7305]
gi|442793341|gb|ELS02793.1| MutS2 family protein [Xenococcus sp. PCC 7305]
Length = 804
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 279/855 (32%), Positives = 446/855 (52%), Gaps = 97/855 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLD----LSTIEDIAGILNSAVS 56
+G Q Q+P +S E S +LL QT+ + Q LD ++DI L
Sbjct: 27 IGAVAAQNLQLP--QSKEVSLQLLAQTTEIYNL--EQELDSGWTFRGVKDIGVALERTKI 82
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEK 115
G +LS E+ + TL + + + + DS P+L EL+ E+E++
Sbjct: 83 GGILSAQELLDIATTLAGIRYLRRII--------DSKTEELPVLNELIFPVRTYPEIEQQ 134
Query: 116 IGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA--GGIDKPLITK 173
I CID + I DRA+ + IRA+ K +L +++ +I Q+ G + + +IT+
Sbjct: 135 IHHCIDDRGEIT-DRANPRIAGIRAKVK----SLRRQIRQSLQRIIQSNLGSVQEAVITQ 189
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R R + +K K +P GI +VSS+G+T ++EP V N + + EE +
Sbjct: 190 RSDRFVIPVKPGQKETIP-GIVHDVSSTGSTLYIEPSSVVNAGNALRQAEKQQKREEEIV 248
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L LT +I + + +++ L+ +DLA ARA ++ W++ P +S ++ +
Sbjct: 249 LRELTEKITEVQEDLEELLAIATVLDLATARARYSLWLEANPPRFIERSE-----TVTLR 303
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
++HPLL+ A VPID+K+E +TRV
Sbjct: 304 RLQHPLLVWQQKHESGTAV----------------------------VPIDVKIEPQTRV 335
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
V ITGPNTGGKT ++KT+GLA+LM+KAG+++PAK +PWF+ +LADIGD QSL+Q+LS
Sbjct: 336 VAITGPNTGGKTVTLKTIGLAALMAKAGIFVPAKVPVEIPWFNTVLADIGDEQSLQQSLS 395
Query: 414 TFSGHISRIVDILELVSRE---------SLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
TFSGHI RI I+E + + SLVL+DE+G+GTDP+EG ALA ++L+YL +
Sbjct: 396 TFSGHIRRISRIIEALKPQEELKANCSNSLVLLDEVGAGTDPAEGSALAIALLKYLAEHS 455
Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
L V TTHY +L LK +D RFENA+ EF +L+PTYR+LWG G SNAL IA+ +G D
Sbjct: 456 LLTVATTHYGELKALKYQDERFENASVEFDDSSLQPTYRLLWGIPGRSNALTIAQRLGLD 515
Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 584
+I+ AQ LV + + +++ +L +RR+ ES+A A L ++ Y E+
Sbjct: 516 SEIVTDAQNLVGIGKTD----DVNQVIAALENQRREQESKAEEAGKLLSQTELFYEEVSQ 571
Query: 585 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE--NQLRDASADEINSLIKESE 642
A+ L R LK + + VQ+ + AK +I V++ + NQ + +L K +
Sbjct: 572 RAESLQAREQELKLSQEKAVQKAIAEAKAEIAQVIRRLQQGNQTAQKAQQATEALNKIAS 631
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
A +A +P + PQ GE+V + L ++ V+ + ++ + V++
Sbjct: 632 KQAIAKPKAPKP------------GYHPQVGEKVRIPRL-NQTGEVLSIE-ENSQLTVRF 677
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G M++ V I + K PA + + + + + + + V+TS+N
Sbjct: 678 GLMKMTVGVTEIESLDGKK----VEPAAKEKTTTKKKTPTATTTKQTPVT----VRTSQN 729
Query: 763 SLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE-- 820
+LD+RG RV + ++ A+A +L++IHG GTG +++ V E L+ HP+VAKYE
Sbjct: 730 TLDIRGSRVANSEVDIESAIAQATESGILWIIHGKGTGRLRQGVHEFLQRHPQVAKYELA 789
Query: 821 QESPMNYGCTVAYIK 835
+ G TV Y+K
Sbjct: 790 PQKEGGSGVTVVYLK 804
>gi|428309185|ref|YP_007120162.1| MutS2 family protein [Microcoleus sp. PCC 7113]
gi|428250797|gb|AFZ16756.1| MutS2 family protein [Microcoleus sp. PCC 7113]
Length = 839
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 274/871 (31%), Positives = 434/871 (49%), Gaps = 122/871 (14%)
Query: 16 SLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
+L ES LL QT L + L I+DI L A LLS E+ A+ TL
Sbjct: 40 TLSESLDLLTQTKEVYQLEARLTSGLSFEGIQDIGESLERAELQGLLSGEELLAIATTLS 99
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
V + + + + Q P+L EL+ ELE++I ID + + DRAS
Sbjct: 100 GVRRLRRVIDD---------QEDVPILNELVAEVRTYPELEQEIHHSIDERG-DVADRAS 149
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
L IR + K + + +L+ + + Q G + + +IT+R R + +KA K +P
Sbjct: 150 PKLAGIRLKLKSLRDRIYQVLQGILQR--QGGAVQQQVITQRGDRFVIPVKAPQKDAIP- 206
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + SS+GAT ++EP V +N E EE AIL LT ++A + +++ L+
Sbjct: 207 GIVHDTSSTGATVYVEPNAIVGLSNQLRIHRRQEQTEEEAILRALTQQVAAVKPDLEKLL 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+DLA A+A ++ W+ P + Q+ +I + ++HPLL+
Sbjct: 267 AVATALDLATAKARYSLWLQANPPRFIDRQA----GETITLRELRHPLLVWQQ------Q 316
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
P+ VPI+++++ RVV ITGPNTGGKT ++KTL
Sbjct: 317 HEQGTPV----------------------VPINVQIQPSIRVVAITGPNTGGKTVTLKTL 354
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GLA+LM+K GL++PA+ LPWFD +LADIGD QS+EQ+LSTFSGHI RI ILE +
Sbjct: 355 GLAALMAKVGLFVPAREPVELPWFDQVLADIGDEQSIEQSLSTFSGHIRRISRILEAIRG 414
Query: 432 ES---------------------------------------------LVLIDEIGSGTDP 446
ES LVL+DE+G+GTDP
Sbjct: 415 ESEALQVDTLLAPRQNSDEDAAQVESWEDDAQTSNLLQPSTPAPSPSLVLLDEVGAGTDP 474
Query: 447 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
+EG ALA ++LQ+L + L V TTHY +L LK +D RFENA+ EF TL+PTYR+LW
Sbjct: 475 AEGSALAIALLQHLANTAQLTVATTHYGELKALKYQDERFENASVEFDDSTLQPTYRLLW 534
Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR 566
G G SNAL +A+ +G + ++ +AQ L+ + Q + L +RR+ E++A+
Sbjct: 535 GIPGRSNALAVARRLGLNPNVVDQAQSLIGGASEDINQ-----VIAGLEAQRRRQETKAK 589
Query: 567 TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 626
A L + L++E+ D A+ L+ R LK + + VQ+ L AK +I V++ +
Sbjct: 590 EATQLLQQAERLHQEVSDRARLLNERERTLKLSQERAVQEALVQAKEEIAQVIRTLQQGP 649
Query: 627 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 686
+ A + ++ A A+ E + + SF P+ G+++ + L ++ A
Sbjct: 650 KSA---------QNAQKATDALQEIAQRRLPAKLPAKQKPSFRPKVGDRIRIPRL-NQTA 699
Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 746
V+ P +D + V++G M++ V +++ + K A P ++ A +
Sbjct: 700 EVLSAPDEDGELTVRFGLMKMTVLLSDVESLDGQK---AEMPV--------KQKPAPAPT 748
Query: 747 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERV 806
+ P V+T KN++D+RG V +A +L+ ++ L++IHG GTG +++ V
Sbjct: 749 PAVASPPSPVVRTDKNTIDIRGKHVADAEFELEQGISEATQLGTLWIIHGKGTGKLRQGV 808
Query: 807 LEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L HP V ++E Q++ G T+AY+K
Sbjct: 809 HAFLERHPLVERFELAQQAEGGTGVTLAYLK 839
>gi|427712156|ref|YP_007060780.1| MutS2 family protein [Synechococcus sp. PCC 6312]
gi|427376285|gb|AFY60237.1| MutS2 family protein [Synechococcus sp. PCC 6312]
Length = 817
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 278/835 (33%), Positives = 431/835 (51%), Gaps = 96/835 (11%)
Query: 16 SLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
+L +SQ+LL QT A L + LD S I++I LN A +L+P E+ + +T
Sbjct: 64 NLRDSQQLLAQTEDAYKLTTYYLRELDFSQIKNIQSGLNRAAHQGVLTPEELLGIAQTQA 123
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
N+ + + DS S L LL +LE++I CI + + +RAS
Sbjct: 124 GSRNLRRVV--------DSYPDLSALQALLAALRTFPQLEQEIHRCI-TEQGEVSERASP 174
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
L IR + ++ M + + + +IT+R R + +KA + +P G
Sbjct: 175 QLAAIR-QHQQQMRGQIHQ-QLQQIIQRKHSSLQDTVITQRAERYVLPVKAPQRDAIP-G 231
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I +VS +GAT ++EP+ VE NN +L+ EE I +L+ ++ + E++ ++
Sbjct: 232 IVHDVSVTGATLYIEPQAIVELNNRLRQLARQGGQEEYRIREVLSQQVTEVVLELQQGLE 291
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ ++DLA ARA + W++ P V D I++ ++HPLL+
Sbjct: 292 LITQLDLAVARARYGLWLNANIP-----RFVELDEPIHLRNLRHPLLIWQH-------HQ 339
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
P TV VPI + + T+VV ITGPNTGGKTA++KTLGL
Sbjct: 340 EQGP----------TV-----------VPITVDIAPPTKVVTITGPNTGGKTATLKTLGL 378
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE- 432
+LM+KAGL +PA LPWF +LADIGD QSL+ NLSTFSGHI I +ILE ++ E
Sbjct: 379 VALMAKAGLMIPAAEPVELPWFRQVLADIGDEQSLQHNLSTFSGHIRTISEILEALTTEA 438
Query: 433 -----SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+LVL+DE+G+GTDPSEG ALA ++L +L D+ + + TTHY +L LK +D RFE
Sbjct: 439 NPDNAALVLLDEVGAGTDPSEGTALAIALLTHLADQAQITIATTHYGELKALKYQDPRFE 498
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ETL PTYR+LWG G SNAL IA+ +G + +I A + + Q +
Sbjct: 499 NASVEFDSETLAPTYRLLWGIPGRSNALAIAQRLGLNPDVIAAAAQAL-----PADQDQV 553
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+++ L +RR E++A TA+ L + L++E+ + + L +R HL+ + Q V
Sbjct: 554 NQVIAGLEAQRRHQEAKASTASQLLSATEKLHQELLTKTEQLRQRELHLRQHQAQAVNTA 613
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
++ A+ +I +++ + + +S++ ++ I + P +
Sbjct: 614 IDQAQAEIAQLIKKL------QAGPQTAQAAAQSQAQLSQIQAKYAPPAPKPI-----PG 662
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPG-DDDTVLVQYGKMRVRVKKNNIRPIPNSKRK--- 723
+ PQ GE+V + KL E+ G +DD + V+ G M+V VK +I + K +
Sbjct: 663 YIPQMGERVRIP----KLQQTGEIIGLEDDAIAVRLGLMKVMVKLTDIESLAGEKPQISP 718
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALA 783
A P P+ S +N P ++T N+LD+RG RV A LD AL
Sbjct: 719 KATQPPPQ----------ASTAKANVTI---PTLRTESNTLDIRGQRVAAAEILLDEALN 765
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYIK 835
+ +VL+VIHG GTG +++ V E LR+HP V K+E +P N G T+ Y +
Sbjct: 766 --QGGTVLWVIHGHGTGKLRQFVHEHLRHHPLVEKFE-FAPQNEGGRGATIVYFR 817
>gi|443318566|ref|ZP_21047815.1| MutS2 family protein [Leptolyngbya sp. PCC 6406]
gi|442781831|gb|ELR91922.1| MutS2 family protein [Leptolyngbya sp. PCC 6406]
Length = 786
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 287/830 (34%), Positives = 434/830 (52%), Gaps = 84/830 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
Q+P + ES+ LL QT A + P L + I+DI L AV LL E+ A+
Sbjct: 34 QLPLPTTQAESEGLLAQTREATQLETRPPGLKFAGIQDIGESLERAVRQGLLGGEELLAI 93
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLII 127
T+ N ++L A +DG Q P+L+ L+ + ELE+ I CID + +
Sbjct: 94 ATTV----NGARQLRRA--IDG---QDAVPVLQGLVADLRTYPELEQSIHHCIDDRAQVT 144
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
DRAS L +R + K+ + + L+++ + Q+G I + +IT+R R + +KA K
Sbjct: 145 -DRASPKLGGLRTQIKQCRSEIYAKLQRILQR--QSGAIQEAVITQRGDRFVIPVKAPQK 201
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P GI + S+SGAT ++EP VE N +L E EE AI LTA++A +
Sbjct: 202 DAIP-GIVHDASTSGATLYVEPHSIVEMGNRLRQLQRQEKTEEEAICRALTAQVAAVATD 260
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
++ L+ V +DLA ARA + W+ G P ++ + ++HPLL
Sbjct: 261 LERLLAIVTALDLAAARARYGLWLQGNAP-----QFITPGEQTTLRHLRHPLLW------ 309
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ + +V VPID+ V RVV ITGPNTGGKT +
Sbjct: 310 ----WQHHHEAGPEV------------------VPIDVVVNPRLRVVAITGPNTGGKTVT 347
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGLA+LM+KAG+Y+PAK LPWFD +LADIGD QS+EQ+LSTFSGHI RI +L
Sbjct: 348 LKTLGLAALMAKAGMYVPAKEPVELPWFDQVLADIGDEQSIEQSLSTFSGHIKRISRVLA 407
Query: 428 LVSRE--SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+ E +LVL+DE+G+GTDPSEG ALA ++L+YL D+ V TTHY +L LK +D R
Sbjct: 408 ALETEGNALVLLDEVGAGTDPSEGSALAIALLRYLADQARFTVATTHYGELKALKYQDDR 467
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
FENA+ EF TL PTYR+LWG G SNAL IA+ +G +I+ +AQ V
Sbjct: 468 FENASVEFDENTLSPTYRLLWGIPGRSNALTIARRLGLAAEIVDQAQNYVGL----GSGQ 523
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
+++ L +R++ E++A AA+L AE L+ E+ +A L R L+ ++ VQ
Sbjct: 524 DVNQVIAGLEAQRQQQETKAAAAAALLAETEKLHAEVSRKAAFLKERERELQQQQQAAVQ 583
Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
+ A+ +I V++ + + +++ +A+AAI HRP
Sbjct: 584 AAVTEARAEIAQVIRRLQQ------GEPTAQSAQKATAAVAAIAARHRP-----APPPKP 632
Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
F P+ G+++ + SLG + A V+ P D V++G M++ V ++ + K
Sbjct: 633 VGFRPRVGDRLRIPSLG-QTAEVLTDPDGDGKFAVRFGIMKMTVSLEDVESLQGEK---- 687
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACW 785
E P ++TS N+ DLRGMRV EA L+ A+A
Sbjct: 688 ----------AELPAPKPPAPDPTPPPPAPAIRTSNNTFDLRGMRVHEAEALLEDAIAS- 736
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAY 833
+ +++IHG GTG ++ V E L++HP++ ++E ++ G T+AY
Sbjct: 737 -ALGPIWIIHGHGTGKLRRGVQEFLQHHPQIQRFEPADQADGGTGVTIAY 785
>gi|307152450|ref|YP_003887834.1| MutS2 family protein [Cyanothece sp. PCC 7822]
gi|306982678|gb|ADN14559.1| MutS2 family protein [Cyanothece sp. PCC 7822]
Length = 801
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 286/835 (34%), Positives = 443/835 (53%), Gaps = 94/835 (11%)
Query: 18 EESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EES +LL QT + Q + L I DI L + G +LS E+ ++ TL V
Sbjct: 42 EESSQLLAQTEEVYDLEQRLNTALSFEGITDIGDALERSDLGGVLSGKELLSIATTLAGV 101
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCI--DCKLLIILDRAS 132
+ + + E Q P+L+ L+ N E+E++I CI D + + DRAS
Sbjct: 102 RRLRRLIEE---------QEKIPVLKTLVANVRTYPEIEQEIHRCIEEDGE---VSDRAS 149
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
L IR + K E + L+ + + Q+G + + +IT+R R + +KA K +P
Sbjct: 150 PRLREIRGQMKVVRERIYRKLQDIMQR--QSGAMQESVITQRGDRFVLPVKAPQKDQVP- 206
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + SS+GAT ++EP VE N + SE EE IL L+A++A+ + +++ L+
Sbjct: 207 GIIHDSSSTGATLYIEPSSVVELGNQLRQYHRSEQIEEETILRGLSAKVAEVKEDLEDLL 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+DLA AR+ ++ W+ G P + H++ ++HPLL+
Sbjct: 267 AAATILDLAVARSRYSWWLKGNPPRFIEPHEHITLRQ------LRHPLLIWQ-------- 312
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
+ + E+ VPI+++V+ + RVV ITGPNTGGKT ++KT+
Sbjct: 313 -------QQHEQGPEV-------------VPINVQVDPKIRVVAITGPNTGGKTVTLKTV 352
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV-- 429
GLA+LM+KAG+++PAK LPWF+ ILADIGD QSL+Q+LSTFSGHI RI+ I+E +
Sbjct: 353 GLAALMAKAGIFIPAKVPVELPWFEQILADIGDEQSLQQSLSTFSGHIRRIIRIIEALNP 412
Query: 430 -------SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
+ SLVL+DE+G+GTDP+EG ALATS+L+YL + GL + TTHY +L LK +
Sbjct: 413 TSEAPTTASSSLVLLDEVGAGTDPAEGSALATSLLKYLAEAAGLTIATTHYGELKALKYQ 472
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D RFENA+ EF+ +TL PTYR+LWG G SNAL IA +G II+ A R R
Sbjct: 473 DERFENASVEFNDQTLSPTYRLLWGIPGRSNALTIAGRLGLRPDIIEDA-----RTRVGG 527
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ + L ++RR+ E +A+ A L + Y E+ +A L +R LK ++ Q
Sbjct: 528 FSEDINRVIAGLEQQRREQEEKAKEATQLLKQTERFYAEVSQKANALQQREKDLKQQQEQ 587
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
++Q+ + AK +I V++ QL+ + N+ +++ A+ I E P V
Sbjct: 588 EIQKAIIAAKAEIAQVIR----QLQQGTPTAQNA--QKATEALGKIAEKQLPKQKQPV-- 639
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ PQ GE+V + SLG + A V+ + + + V V++G M++ V +I + K
Sbjct: 640 ---KIYRPQVGEKVRIPSLG-QTAEVLNILEESEEVSVRFGIMKMTVPFRDIESLDGKKV 695
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
+ P K + ++TS N++D+RG RV EA ++ A+
Sbjct: 696 E-----VPEKAKTAPPANPSPPPAPKSSPV----IRTSYNTVDIRGSRVVEAESDVEKAI 746
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYI 834
A VL++IHG GTG +++ V E L HP+V ++E +P N G TVAY+
Sbjct: 747 ARATESGVLWIIHGKGTGKLRQGVHEFLERHPQVKRFEL-APQNEGGAGVTVAYL 800
>gi|17135027|dbj|BAB77573.1| DNA mismatch repair protein [Nostoc sp. PCC 7120]
Length = 678
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 249/734 (33%), Positives = 394/734 (53%), Gaps = 75/734 (10%)
Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
ELE++I CID + + DRAS L IR E ++ + L+ + ++ + + L
Sbjct: 9 ELEQEIHRCIDERGQVT-DRASTKLGDIRTELRKLRSQITQKLQNILQ--VKSNAVQEQL 65
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
IT+R R + +KA K +P GI + S+SGAT ++EP V N + E AEE
Sbjct: 66 ITQRGDRFVIPVKAPQKDAIP-GIVHDTSTSGATLYIEPNSVVPMGNQLRQTIRKEQAEE 124
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 290
AI LT ++A + +++ L+ V +D+A ARA ++ W+ P + I
Sbjct: 125 EAIRRALTEKVAAVKPDLERLLAIVTTLDMATARARYSLWLKANPPRFIDRQEQEI---I 181
Query: 291 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 350
+ + HPLL+ A +P+D+ +
Sbjct: 182 TLRQLHHPLLVWQQQHEQGHAV----------------------------IPVDLLISPH 213
Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
RVV ITGPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWFD +LADIGD QSL+Q
Sbjct: 214 IRVVTITGPNTGGKTVTLKTLGLAALMAKVGLFVPAREPVEMPWFDQVLADIGDEQSLQQ 273
Query: 411 NLSTFSGHISRIVDIL--------ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
+LSTFSGHI RI IL +L + SLVL+DE+G+GTDP+EG ALA ++LQYL D
Sbjct: 274 SLSTFSGHIRRISRILNALGTGEQDLETPNSLVLLDEVGAGTDPAEGSALAIALLQYLAD 333
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
L V TTH+ +L LK +D RFENA+ EF TL PTYR+LWG G SNAL IA +G
Sbjct: 334 HAQLTVATTHFGELKALKYEDQRFENASVEFDDATLSPTYRLLWGIPGRSNALAIALRLG 393
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
+++++A+ V E + + L +RR+ E++A A + + LY+E+
Sbjct: 394 LKAEVVEQAKTQVGEATDE-----VNLVIAGLEAQRRRQETKAAEAQKILQQAERLYKEV 448
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
++A L R LKA + VQQ + AK +I V++ +L+ +A ++ +++
Sbjct: 449 SNKAAALQEREQSLKASQEIAVQQAITQAKGEIAKVIR----RLQQGTATAQDA--QQAT 502
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
+ + I + ++ + F P+ G+++ + G + A V+ P +D + V++
Sbjct: 503 NNLHQIAQKYQ----PAPPPKAKPGFVPKVGDRIRISQFG-QTADVLTAPDEDGELTVRF 557
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G M++ VK +I + K P P + K + + + A ++TSKN
Sbjct: 558 GIMKMTVKLEDIESLDGQK------PEP-ITKAKPAPVTPPPPAQPVLA-----IRTSKN 605
Query: 763 SLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE-- 820
++DLRG RV +A + LD A++ E+ +++IHG GTG +++ V L HPRV+++E
Sbjct: 606 TVDLRGKRVADAEYILDKAIS--EATGPIWIIHGHGTGKLRQGVHTFLEQHPRVSRHEPA 663
Query: 821 QESPMNYGCTVAYI 834
++S G T+A+I
Sbjct: 664 EQSDGGSGVTIAHI 677
>gi|443312975|ref|ZP_21042589.1| MutS2 family protein [Synechocystis sp. PCC 7509]
gi|442777125|gb|ELR87404.1| MutS2 family protein [Synechocystis sp. PCC 7509]
Length = 792
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 275/842 (32%), Positives = 439/842 (52%), Gaps = 85/842 (10%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
+G + QIP S +S++LL QT L + L I+DI + A
Sbjct: 27 LGSIAARNLQIP--ASQLQSEELLAQTKEVYDLETRLTTGLAFDGIQDIGDSVERAQLQG 84
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIG 117
+L+ +E+ + TL + + + ++ P+L +L+ ELE++I
Sbjct: 85 ILAGNELLEIATTLFGARQLRRFIDNQPDI---------PVLTQLVSELRTYPELEQEIH 135
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
CID + + DR+S L +R + K+ ++ L+ + + QA + + +IT+R R
Sbjct: 136 RCIDERGQVT-DRSSPILGDLRTQIKQLRTQINRSLQNILQR--QANAVQEQIITQRGDR 192
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
+ +KA K +P GI + S+SGAT ++EP G V N +L E EE AI L
Sbjct: 193 FVIPVKAPQKDAIP-GIVHDTSTSGATLYVEPSGVVPLGNQLRQLVRKEQVEEEAIRRTL 251
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
T +A+ +++ L+ IDLA ARA ++ W+ P +++ IN+ ++H
Sbjct: 252 TKLVAEVSEDLERLLAIATTIDLATARARYSFWLKANPPRFINRNDGEM---INLRQLRH 308
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLL+ + N VP+D+ ++ RVV IT
Sbjct: 309 PLLVWQQ-----QHEQDRNV-----------------------VPVDLFIQPNIRVVTIT 340
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT ++KTLGLA+LM+K GL++PA+ +PWF+ +L DIGD QSLEQ+LSTFSG
Sbjct: 341 GPNTGGKTVTLKTLGLAALMAKVGLFIPAREPVEMPWFEQVLTDIGDEQSLEQSLSTFSG 400
Query: 418 HISRIVDILELVSR--ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
HI RI IL + + SLVL+DE+G+GTDP EG ALA S+L YL + L++ TTH+ +
Sbjct: 401 HIRRISRILTAIDKSGSSLVLLDEVGAGTDPVEGSALAISLLHYLANNAQLSIATTHFGE 460
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L LK +D RFENA+ EF +L PTYR+LWG G SNAL IA+ +G ++I+ A+K +
Sbjct: 461 LKALKYQDDRFENASVEFDEISLSPTYRLLWGIPGRSNALTIAERLGLKLEVIEEAKKHL 520
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
+ Q + L +R++ E++A A L + Y+E+ +A L R
Sbjct: 521 GGANDDVNQ-----VIAGLEAQRKRQETKATEAQKLLEQAERFYQEVSAKAAALQARERD 575
Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE-SAIAAIVEAHRP 654
L+A + VQ+ ++ AK +I V++ +L+ + +++ +E + IAA
Sbjct: 576 LRASQDVVVQKAISEAKGEIAQVIR----RLQKGTVTAMDAQQATNELNQIAA------- 624
Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
+ + F PQ G+++ + LG + A V+ +P D+ ++V++G M++ V +I
Sbjct: 625 -NYVAPPPKPKPGFKPQIGDRLRIPKLG-QTAEVLSIPSDEGDLIVRFGIMKMTVNLEDI 682
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
+ K A P + E P ++TSKN++DLRG RV +A
Sbjct: 683 ESLDGEKPVVAKKKKPEV-----------IADKPIETIPTPVIRTSKNTVDLRGSRVADA 731
Query: 775 SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVA 832
LD A++ + L++IHG GTG +++ V E LR HPR+++YE Q++ G TVA
Sbjct: 732 ERTLDDAIST--ANGQLWIIHGHGTGKLRQGVREFLRQHPRISRYEDAQKADGGTGVTVA 789
Query: 833 YI 834
YI
Sbjct: 790 YI 791
>gi|254412960|ref|ZP_05026732.1| MutS2 family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196180124|gb|EDX75116.1| MutS2 family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 820
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 281/853 (32%), Positives = 429/853 (50%), Gaps = 105/853 (12%)
Query: 16 SLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
+L ES LL QT L + I+DI L A +LS ++ A+ TL
Sbjct: 40 TLAESLHLLAQTKEVYQLECQLTSGWTFEGIQDIGDALERAERQGILSGEDLLAIATTLA 99
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
V + + + + ++ P+L +L+ + ELE++I CID + + DRAS
Sbjct: 100 GVRRLRRLIDDQEDI---------PVLNQLVADIRTYPELEQEIHRCIDERGDVT-DRAS 149
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
L IR K + + L+ + + Q G + +PLIT+R R + +KA K +
Sbjct: 150 PKLAEIRQHSKSLRDRIYQTLQNIVQR--QGGALQQPLITQRGDRFVLPVKAPQKDSV-S 206
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + SS+GAT ++EP V N E AE A+ +LT ++A + +++ ++
Sbjct: 207 GIVHDASSTGATLYIEPHAIVGLGNQLKTYQRREQAEAEAVRRVLTEQVAAVKPDLEQVL 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+DLA A+A ++ W+ P + SI + ++HPLL+
Sbjct: 267 AVATRLDLATAKARYSLWLQANPPRFIDPNQ---RESITLRQLRHPLLVWQ--------- 314
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPV-PIDIKVECETRVVVITGPNTGGKTASMKTL 371
++ E D PV PI I+++ + +VV ITGPNTGGKT ++KTL
Sbjct: 315 ---------YQHEE-----------DAPVVPITIQIQPQIKVVAITGPNTGGKTVTLKTL 354
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE---- 427
GLA+LM+K GL++PAK LPWF+ ILADIGD QSLEQ+LSTFSGHI RI ILE
Sbjct: 355 GLAALMAKVGLFVPAKEPVELPWFEQILADIGDEQSLEQSLSTFSGHIRRISRILEELEN 414
Query: 428 ---------------LVSRE--------SLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
L RE +LVL+DEIG+GTDP+EG ALA ++L YL D
Sbjct: 415 CRAPWRVSTDGGEDDLAQREPDTPHPTSALVLLDEIGAGTDPAEGSALAIALLNYLADHA 474
Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
L V TTHY +L LK +D RFENA+ EF+ TL PTYR+LWG G SNAL IA+ +G
Sbjct: 475 QLTVATTHYGELKALKYQDERFENASVEFNDVTLSPTYRLLWGIPGRSNALTIAERLGLK 534
Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 584
++ AQ LV + Q + L +RR E++A+ A L + L++E+
Sbjct: 535 SDVVSLAQTLVGGSSEDVNQ-----VISGLEAQRRDQETKAQEANQLLQQTERLHQEVSS 589
Query: 585 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 644
+AK L R LK + Q VQ + AK +I V++ + +I K++ A
Sbjct: 590 KAKLLQERERELKLSQEQAVQDAIAQAKAEIAQVIRKLQQ------GPQIAQNAKKATDA 643
Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
+ I + H +F P+ G+++ + L ++ A V+ +D + V++G
Sbjct: 644 LKEIEQRH----IPKPPAKAKPAFQPKVGDRIRIPRL-NQTAEVLTPADEDGELTVRFGL 698
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
M++ V +I + K A P + S + + P ++T KN++
Sbjct: 699 MKMTVSLADIESLEGQK---AHIPV--------KSKPASTPAPAAASPPTPPIRTEKNTI 747
Query: 765 DLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QE 822
DLRG RV +A +L+ A++ + VL++IHG GTG ++ V E L HP V ++E ++
Sbjct: 748 DLRGSRVADAEVELEQAISKAIASGVLWIIHGKGTGKLRAGVHEFLERHPLVDRFELAKQ 807
Query: 823 SPMNYGCTVAYIK 835
+ G TVAY+K
Sbjct: 808 AEGGSGVTVAYLK 820
>gi|434384820|ref|YP_007095431.1| MutS2 family protein [Chamaesiphon minutus PCC 6605]
gi|428015810|gb|AFY91904.1| MutS2 family protein [Chamaesiphon minutus PCC 6605]
Length = 843
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 265/850 (31%), Positives = 424/850 (49%), Gaps = 125/850 (14%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L L IED L A +LS E+ + TL + + + + DS +
Sbjct: 66 LSLDGIEDFGDALERAAVQGMLSGKELHEIATTLAGMRKLRRTI--------DSEENIPV 117
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
L L+ + ELE+ I CID + + DR+SE L +R + R R + L+SL++
Sbjct: 118 LQGLVADVRTYPELEQDIYHCIDDRGDVT-DRSSEKLAQVRVQLKGLRDRIYKFLNSLIQ 176
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ Q+ I +PLIT+R R + +KASHK +P G+ + S SG+T ++EP+ +
Sbjct: 177 R------QSNAIQQPLITQRGDRFVIPVKASHKDAIP-GVVHDSSGSGSTLYVEPQQIIN 229
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
N +L E E A+L LTA++ + ++++L+ IDLA A+A ++ W++
Sbjct: 230 LGNQLRQLQRQEQREIEAVLMALTAKVTEVVEDLEHLLVVATTIDLATAKARYSLWLEAN 289
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P ++ + I + ++HPLL+ +P+
Sbjct: 290 PPRFVDRAASEY---ITLRQLRHPLLI------WKHRHEEGSPV---------------- 324
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
VPID+ + + RVV ITGPNTGGKT ++KTL + +LM+K GL++PA+ +PW
Sbjct: 325 ------VPIDLSIRPDIRVVTITGPNTGGKTVTLKTLAIVALMAKVGLFIPAREPVEIPW 378
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELV------------------------- 429
FDLILADIGD QSL+Q+LSTFSGHI RI IL+ +
Sbjct: 379 FDLILADIGDEQSLQQSLSTFSGHIRRIGRILDAIGEEGGERGAGSTSTTLSVSGGDEEM 438
Query: 430 ----------------------SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
+ SL+L+DE+G+GTDP+EG ALA ++LQYL DR L
Sbjct: 439 GSVRDDEETIDLQVSHSPIHPSTPSSLILLDEVGAGTDPAEGSALAIALLQYLADRAMLT 498
Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
+ +THY +L LK +D+RFENA+ EF L PTYR+LWG G SNAL+IA+ +G + ++
Sbjct: 499 IASTHYGELKALKYQDSRFENASVEFDDVNLAPTYRLLWGIPGRSNALSIAQRLGLNPEV 558
Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
I+ A+ V + Q+ +E+ L +RR E++A AA++ + Y E+ +A
Sbjct: 559 IENAKSQV--ILGATQE--VNEVIAGLEAQRRTQETKASEAANVLKQAEAFYLEVSQKAA 614
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
L R LK + + VQ + AK +I V++ QL+ + SE +
Sbjct: 615 QLQAREQELKVNQERAVQAAIAEAKGEIAQVIR----QLQQGPQTAQAAQQATSE--LDG 668
Query: 648 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
+ P + F P+ G+++ + +G K + EV D+ + V++G M++
Sbjct: 669 VSSRRLPAKS---TPKPPVGFNPKVGDRIRIPKIGQKAEVLSEV-DDNGNLNVKFGIMKM 724
Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 767
V +I + K A P P+ + + A+ ++TS N++D+R
Sbjct: 725 NVALADIESLTGEK----ATPPPK-------KSGAKVPGTAAPAAPPVAIRTSTNTVDVR 773
Query: 768 GMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPM 825
G RV A +++ A+ +++VIHG GTG ++E V E L +HP+V ++E E
Sbjct: 774 GQRVMNAETEIERAIGRAYQSGIMWVIHGKGTGKLREGVHEFLSHHPQVLRFELAGEKDG 833
Query: 826 NYGCTVAYIK 835
G T+AY+K
Sbjct: 834 GGGVTIAYLK 843
>gi|428301815|ref|YP_007140121.1| MutS2 protein [Calothrix sp. PCC 6303]
gi|428238359|gb|AFZ04149.1| MutS2 protein [Calothrix sp. PCC 6303]
Length = 796
Score = 373 bits (957), Expect = e-100, Method: Compositional matrix adjust.
Identities = 266/843 (31%), Positives = 437/843 (51%), Gaps = 84/843 (9%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQ 58
+G + QIP ++ +S+ LL QT + S L I+DI + A
Sbjct: 30 LGAIASRNLQIPTSQA--QSENLLAQTQEIYKLESRISPGLSFEGIQDIGDAIERAALQG 87
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+L+ E+ A+ TL N+ + + D+ + LL+L+ + E+E++I
Sbjct: 88 ILAGEELLAIATTLAGTRNLRRII--------DNQEDLPILLDLVADLRTYPEIEQEIHR 139
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
C+D + I DRAS+ L IRAE +++ + L+ + ++ + + +IT+R R
Sbjct: 140 CVDERGQIA-DRASQKLGDIRAELRKSRSQIIQKLQNILQ--VKSNAVQENVITQRGDRY 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
+ +KASHK ++ GI + S+SG T ++EP V N +L E EE I LT
Sbjct: 197 VIPVKASHKDVI-HGIVHDTSTSGVTLYIEPNSVVPMGNQLRQLIRKEEIEEEVIRRQLT 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
A++A + +++ L+ V +DLA A++ ++ W+ P + + +I + ++HP
Sbjct: 256 AQVADIKDDLERLLAIVTTLDLATAKSRYSFWLKANPPRFVDRE---ANETITLRKLRHP 312
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LL + E+ +P+D+ ++ ETRVV ITG
Sbjct: 313 LLEWQHQHE---------------QGHEV-------------IPVDLVIQPETRVVTITG 344
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT ++KTL LA+LM+K GL++PA+ LPWF+ +LADIGD QSL+Q+LSTFSGH
Sbjct: 345 PNTGGKTVTLKTLALAALMAKVGLFVPAREPVELPWFEQVLADIGDEQSLQQSLSTFSGH 404
Query: 419 ISRIVDILELVSRE----SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
I RI IL ++ + SLVL+DE+G+GTDP EG ALA ++L +L + V L + +TH+
Sbjct: 405 IRRISRILNAITGDTVTPSLVLLDEVGAGTDPVEGSALAIALLHHLANHVLLTMASTHFG 464
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L LK +D RFENA+ EF TL PTY++LWG G SNAL IA+ +G +I+ A++
Sbjct: 465 ELKALKYQDERFENASVEFDDATLSPTYKLLWGIPGRSNALAIAQRLGLSVDVIEAAKQQ 524
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
+ E +E+ L +RR+ E++A A +L + LY+E+ +A +L+ R
Sbjct: 525 MGGANDE-----VNEVIAGLEAQRRRQETKASEAQNLLHQAEKLYKEVSAKATNLEEREQ 579
Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP 654
LKA + VQ + AK +I V++ Q +A E + P
Sbjct: 580 ALKASQEVAVQNAIAQAKGEIAKVIKGL--QKGKPTAQEAQQATNTLNQISTQFIPKAAP 637
Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
F P+ G+++ + +G + A V+ P D + V++G M++ VK +I
Sbjct: 638 KAPI--------GFIPKTGDRIRITKIG-QTAEVITPPNSDGELNVRFGIMKMTVKLEDI 688
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
+ K + A P ++R + A ++TS+N++DLRG RV ++
Sbjct: 689 ESLDGKKPEPIAKP--------QNRTPPPPVTPPPPA-----IRTSQNTIDLRGKRVADS 735
Query: 775 SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVA 832
LD A++ + +++IHG GTG ++E V L+ HPR++ E ++ G T+A
Sbjct: 736 EIILDQAISTAAGQ--IWIIHGHGTGKLREGVHAYLKQHPRISHTEPAAQADGGTGVTIA 793
Query: 833 YIK 835
+IK
Sbjct: 794 HIK 796
>gi|411117308|ref|ZP_11389795.1| MutS2 family protein [Oscillatoriales cyanobacterium JSC-12]
gi|410713411|gb|EKQ70912.1| MutS2 family protein [Oscillatoriales cyanobacterium JSC-12]
Length = 865
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 291/905 (32%), Positives = 451/905 (49%), Gaps = 136/905 (15%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP---LDLSTIEDIAGILNSAVSG 57
+G Q +IP + +++ LL QT + +S+P L+ I+DI L A G
Sbjct: 27 LGAIAAQNLKIPTHR--DQTLDLLAQTQEVYDL-ESRPSGGLNFDGIDDIGEPLERAGLG 83
Query: 58 QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
+L+ E+ ++ TL + + + D+ ++ L L+++ ELE+ I
Sbjct: 84 GILTGKELLSIATTLAGARTLRRTI--------DNYPEFTVLNNLIQDLRTYPELEQDIH 135
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
CI +L+RAS L IR + K+ + + S+L + + +A I + +IT+R R
Sbjct: 136 HCIGDHG-DVLERASLKLGNIREQLKQVRDRIYSILHSILQR--KAHAIQEHVITQRSGR 192
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
+ +KA K +P GI + S SGAT ++EP+ AV NN +L E EE AI L
Sbjct: 193 FVLPVKAPQKDAIP-GIVHDTSMSGATLYIEPQSAVNLNNQLRQLQRQEQVEEEAIRQRL 251
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
+ ++A + +++ LM V +DLA ARA ++ W+ P + S SSI + ++H
Sbjct: 252 SKKVADVKPDLERLMAIVTTLDLATARARYSDWLGANPPRFPNSS-----SSIVLRQLRH 306
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLL+ A VPID+ ++ + RVV IT
Sbjct: 307 PLLVWQEQHEQGKAV----------------------------VPIDLVIQPQIRVVAIT 338
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT ++KT G+A+LM+K GL++PAK LPWFD ILADIGD QSL+Q+LSTFSG
Sbjct: 339 GPNTGGKTVTLKTFGIAALMAKVGLFVPAKEPAELPWFDQILADIGDEQSLQQSLSTFSG 398
Query: 418 HI---SRIVDIL---------ELVSRE--------------------------------- 432
HI SRI++ L E+ S+E
Sbjct: 399 HIRRISRILEALEGQKQEQEPEVRSQEPGDSNQGGYRVLGMDSPQPPIPNPYFPSSATKL 458
Query: 433 -------------SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
SLVL+DE+G+GTDPSEG ALA ++L+YL D GL + TTH+ +L L
Sbjct: 459 QSLIPNPQSPVPLSLVLLDEVGAGTDPSEGSALAIALLKYLADHAGLTIATTHFGELKAL 518
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
K +D RFENA+ EF +L PTYR+LWG G SNAL IA +G II+ A+ V
Sbjct: 519 KYQDPRFENASVEFDDVSLSPTYRLLWGIPGRSNALAIASRLGLKDTIIEAAKTYVGGAT 578
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
+ + + L E+RR+ E++++ A L LY+E+ +A L R L
Sbjct: 579 QD-----VNTVIAGLEEQRRQQETRSQEAEKLLKHAERLYQEVSRKAASLQEREKALHLG 633
Query: 600 ETQQVQQELNFAKVQIDTVVQDF--ENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
+ Q VQ+ + AK I V++ Q A+ +L + SE + + + +P
Sbjct: 634 QEQAVQEAIAQAKRDIAQVIRQLQQGPQTAQAAQQATEALNQISEQYLPSRQQQPKPK-- 691
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
S F PQ G+++ + LG + A V+ +P +D + V++G M++ V ++ +
Sbjct: 692 --------SGFCPQVGDRIRIPRLG-QTAEVLSIPDANDEITVRFGLMKMTVSLQDVESL 742
Query: 718 PNSKRKNAANPAPRLRKQQ---EDRQSGSAGSSNEEA-SYGPRVQTSKNSLDLRGMRVEE 773
+ K A +R Q+ ++ + + +S A P ++T+ N+LDLRG RV +
Sbjct: 743 --TGEKVAIEKKSDVRSQEIAGKNPPTPTVSASPMPAPPTAPLLRTTSNTLDLRGSRVAD 800
Query: 774 ASHQLDIALACWESR-SVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN--YGCT 830
A Q+D ALA S L++IHG GTG +++ V L H V ++E S + G T
Sbjct: 801 AEVQIDRALADLASTGGALWIIHGHGTGKLRQGVHAFLEQHALVDRFELASREDGGSGVT 860
Query: 831 VAYIK 835
VAY++
Sbjct: 861 VAYLR 865
>gi|16330262|ref|NP_440990.1| recombination and DNA strand exchange inhibitor protein
[Synechocystis sp. PCC 6803]
gi|383322003|ref|YP_005382856.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383325172|ref|YP_005386025.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383491056|ref|YP_005408732.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384436323|ref|YP_005651047.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
gi|451814420|ref|YP_007450872.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 6803]
gi|3914083|sp|P73625.1|MUTS2_SYNY3 RecName: Full=MutS2 protein
gi|1652751|dbj|BAA17670.1| DNA mismatch repair protein; MutS [Synechocystis sp. PCC 6803]
gi|339273355|dbj|BAK49842.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803]
gi|359271322|dbj|BAL28841.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359274492|dbj|BAL32010.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359277662|dbj|BAL35179.1| DNA mismatch repair protein [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407958177|dbj|BAM51417.1| recombination and DNA strand exchange inhibitorprotein [Bacillus
subtilis BEST7613]
gi|451780389|gb|AGF51358.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 6803]
Length = 822
Score = 369 bits (946), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 279/847 (32%), Positives = 424/847 (50%), Gaps = 102/847 (12%)
Query: 18 EESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EES++LL QT A ++ S I DI L G L++ E+ A+ TL V
Sbjct: 49 EESRELLAQTQAVESIENSPESNWHFKGIADITEPLARVERGGLVTGLELLAIAGTLAGV 108
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASE 133
+ + + E +L+ L L+ L ELE+ I C+ D K + +RAS
Sbjct: 109 RRLRRVIEERDDLEI--------LQTLVAEVRTLPELEQAIHHCLGEDGK---VAERASP 157
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
L IR + K E + L+K+ + Q+ + + +IT+R R + IKA +K +P G
Sbjct: 158 KLGEIRQKLKAVREQIQQKLQKIIQR--QSNALQEAVITQRGDRFVLPIKAGYKEQMP-G 214
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T ++EP+ VE N + E EE IL L+ ++ + ++++L+
Sbjct: 215 IVHDSSASGNTLYVEPQAIVELGNKLRQARRQEQTEEERILRQLSDQVLEVLLDLEHLLA 274
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+DLA AR ++ W+ P + + I + ++HPLL + + A
Sbjct: 275 IATRLDLATARVRYSFWLGAHPPQWLTPGD---EKPITLRQLRHPLLHWQAEKEGGPAV- 330
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
VPI + ++ + RV+ ITGPNTGGKT ++KTLGL
Sbjct: 331 ---------------------------VPITLTIDSQIRVIAITGPNTGGKTVTLKTLGL 363
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR-- 431
+LM+K GLY+PAK +PWF ILADIGD QSL+QNLSTFSGHI RI+ IL+ +
Sbjct: 364 VALMAKVGLYIPAKETVEMPWFAQILADIGDEQSLQQNLSTFSGHICRIIRILQALPSGV 423
Query: 432 ----------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
SLVL+DE+G+GTDP+EG ALA ++L++L D+ L V TTHY +
Sbjct: 424 QDVLDPEIDSPNHPIFPSLVLLDEVGAGTDPTEGSALAIALLRHLADQPCLTVATTHYGE 483
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L LK +D RFENA+ EF ++L PTYR+LWG G SNAL IA+ +G I+++A+ +
Sbjct: 484 LKALKYQDARFENASVEFDDQSLSPTYRLLWGIPGRSNALAIAQRLGLPLAIVEQAKDKL 543
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
+ Q + L +RR+ E +A A L E Y+++ +A L R
Sbjct: 544 GGFSEDINQ-----VIAGLESQRREQEQKAANAQKLLQETEIFYQQVSQKAASLQARERE 598
Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA----SADEINSLIKESESAIAAIVEA 651
LK+ + Q+VQQ + AK +I V++ + A A EI I+ + A A
Sbjct: 599 LKSYQDQEVQQAIAAAKEEIAKVIRQLQRGKPSAQKAQQATEILGQIQAEQKAKVA---- 654
Query: 652 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
+ P GE++ + S G + A V +V TV V G M++ V
Sbjct: 655 -----------PKPIGYQPTVGERIRIPSFG-QTAEVTQVNATAQTVNVTLGLMKMTVPM 702
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
+I + N K+ P P + + ++ + + E S V+T KN+LD RG R+
Sbjct: 703 ADIESL-NGKK---VEPPP--KSEPVPKKVKAEPPATEAKSPPVLVRTEKNTLDCRGDRL 756
Query: 772 EEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YG 828
E A +L+ AL VL++IHG GTG +++ V E L +HP V Y +P N G
Sbjct: 757 ERAESRLEKALNQALDAGVLWIIHGKGTGKLRQGVQEYLSHHPLVKSYAL-APQNDGGAG 815
Query: 829 CTVAYIK 835
T+AY++
Sbjct: 816 VTIAYLR 822
>gi|318042364|ref|ZP_07974320.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
CB0101]
Length = 861
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 264/847 (31%), Positives = 432/847 (51%), Gaps = 94/847 (11%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
++P SL+ SQ+LL QT+ LA+ + L + D+ + G + E+
Sbjct: 88 ELPLAPSLKASQELLAQTAELLALDGLTEGGLSFQGVADLRRTVQLCAKGGVAGADELLD 147
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
V TL + +++ +A P+ +++ L ELE+++ FCI+ +
Sbjct: 148 VATTLATARRLRRQIDDA---------ELRPVTTAMVEGLRTLPELEQRLRFCIEDGGRV 198
Query: 127 ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
DRAS L +R + R+ + L+ LL++ AA + + +I +R R + +
Sbjct: 199 A-DRASSPLAQLRRQIASARQERRDRLNDLLRRYAALLQDS------VIAERNGRPVLAV 251
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
KA LP G+ + S+SG+T F+EP+ + N +L E A+L L+A +
Sbjct: 252 KAGLAGQLP-GLVHDSSASGSTVFIEPQAVIPLGNRLRQLEGEAREAERAVLQELSALVG 310
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ +++L +L++D A ARA + W+ V P L + + + +EG++HPLLL
Sbjct: 311 DEQAALEHLQQVLLQLDAALARARYGAWLGAVRPELVADPL----APLRLEGLRHPLLLW 366
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
R ++P+ VP+ ++V RVV ITGPNTG
Sbjct: 367 QERRE------GTHPV----------------------VPVSVRVHEGLRVVAITGPNTG 398
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++K++GLA+LM++AGL+LP P+LPW +LADIGD QSL+QNLSTFSGH+ RI
Sbjct: 399 GKTVTLKSVGLAALMARAGLFLPCSGTPQLPWCAQVLADIGDEQSLQQNLSTFSGHVRRI 458
Query: 423 VDILELV----------SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
ILE + SLVL+DE+G+GTDP+EG ALA ++L+ L +R L + TTH
Sbjct: 459 ARILEALPPAAADLGAAPGASLVLLDEVGAGTDPTEGTALAIALLRQLAERARLTIATTH 518
Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ +L LK D RFENA+ F +ETL PTY + WG G SNAL IA +G D ++++ AQ
Sbjct: 519 FGELKALKYNDARFENASVAFDVETLSPTYHLQWGIPGRSNALAIASRLGLDGQVLEEAQ 578
Query: 533 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 592
+L L P R + +++ L +R+K + A AA+L A L+ E+ + +
Sbjct: 579 QL---LAP-RGEGEVNQVIAGLENQRQKQQEAAEEAAALLARTELLHEELLQRWQQQKEQ 634
Query: 593 AAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH 652
+A L+ + QQ+++ + + ++ +++ Q D + + + + ++ + H
Sbjct: 635 SAELQEQRRQQLERSIRDGQKEVRRIIRRL-RQGHDVDTTSLGETARRAGQRLKSLEQQH 693
Query: 653 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
RP + + + P G++V V SLG K V+ + D + V+ G MR+ ++ +
Sbjct: 694 RPQPE----RRDHKGWRPALGDRVRVLSLG-KAGEVLALSADGRELTVRCGVMRLNLELS 748
Query: 713 NIRPIPNSKRKNAANPA-PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
I + N PA P + K Q +S A P V+T +N++D+RGMRV
Sbjct: 749 AIEGL------NGEKPAPPEVSKPQVQVRSRKAFGGRS-----PDVRTERNTVDVRGMRV 797
Query: 772 EEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP---RVAKYEQESPMNYG 828
EA ++ L + +VIHG+GTG +K + L P RV+ EQ G
Sbjct: 798 HEAEAAVEEVLRS--ANGPTWVIHGIGTGKLKRGLRAWLDGLPYVERVSDAEQ-GDGGQG 854
Query: 829 CTVAYIK 835
C+V ++K
Sbjct: 855 CSVIWLK 861
>gi|443477184|ref|ZP_21067049.1| MutS2 family protein [Pseudanabaena biceps PCC 7429]
gi|443017746|gb|ELS32124.1| MutS2 family protein [Pseudanabaena biceps PCC 7429]
Length = 678
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 246/718 (34%), Positives = 389/718 (54%), Gaps = 74/718 (10%)
Query: 6 VQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSE 64
+ A IP EE+ +LL QT A A+ + + L I++I + A +LS E
Sbjct: 29 IAAAHIPIPDRYEETLELLTQTKEAYALEERNAGVSLDGIQNITEAVFRAEKQGILSALE 88
Query: 65 ICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGFCIDCK 123
+ A+ TL N+ ++L A Y P L++L + ++E++I CID +
Sbjct: 89 LWAIATTLAGARNLRRQLDNAD---------YCPNLQILASDLRTYPDVEQEIYRCID-E 138
Query: 124 LLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
+LDRASE L IR E R + M L +++++ A + + +IT+R R
Sbjct: 139 GGNVLDRASERLGEIRHELTSVRDQIMTKLQNIMQR------NASSLQEQIITQRNDRYV 192
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +K+ + +P G+ + SS+G T F+EP V+ NN +L E A+ IL+ L+A
Sbjct: 193 LSVKSPQRDRVP-GVIHDTSSTGMTLFVEPNSIVQSNNRLRQLLKMEQAQIEIILTELSA 251
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
+I + +++ L+ V +IDLA ARA +A W+ G P H +I + ++HPL
Sbjct: 252 KITEIAEDLQRLLIIVTKIDLAVARARYAYWLGGNPP------HFLDQEAIVLRQLRHPL 305
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
L+ + + E E+ VP+D+ + + VVVITGP
Sbjct: 306 LVWQ---------------QKNEEGREV-------------VPVDVLISPQISVVVITGP 337
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKTA++KT GLA+LM+KAG+++PA+ +PWFDL+LADIGD QSL+QNLSTFSGHI
Sbjct: 338 NTGGKTATLKTFGLAALMAKAGMFIPAREPVEMPWFDLVLADIGDEQSLQQNLSTFSGHI 397
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
RI ILE +S +SLVL+DE+G+GTDPSEG A+AT++L+YL D LA+ TTH+ +L L
Sbjct: 398 RRIGRILEALSPQSLVLLDEVGAGTDPSEGSAIATALLEYLGDHTRLAIATTHFGELKAL 457
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
K ++ +FENA+ EF +L PTYR+LWG G SNAL IA +G + I+ AQ +R
Sbjct: 458 KYQNPKFENASVEFDDASLAPTYRLLWGIPGRSNALAIAGRLGLPQDILAAAQ-----VR 512
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
+++ L +RR+ + AA L E L++EI D A+ + +A L+ +
Sbjct: 513 VGIGSAEMNDVIAELEAQRREQTQKTEAAAHLLVETERLHKEILDRAEMMRSQAKELRER 572
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
+ ++V + A+ ++ V++ + Q A+ D ++ +E I + + H P+
Sbjct: 573 QEKEVNAAIAQAQKEVGRVIRKLQ-QGEQAATD-----VQHTERRIEELTKRHLPE---- 622
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
T G++V + G K+A V+ VP V+ G+M++ V ++ PI
Sbjct: 623 -MPPAKPKLTLNIGDRVRIPKFG-KIAQVLTVPNGAGDFSVRLGQMKLSVNLSDTEPI 678
>gi|414077065|ref|YP_006996383.1| DNA mismatch repair protein [Anabaena sp. 90]
gi|413970481|gb|AFW94570.1| DNA mismatch repair protein [Anabaena sp. 90]
Length = 844
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 263/885 (29%), Positives = 438/885 (49%), Gaps = 136/885 (15%)
Query: 11 IPFGKSLEESQKLLNQTSAALAM-MQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P ++ ES++LL QT + + P L I+DI L A+ +L E+ A+
Sbjct: 35 LPIPETQVESEQLLAQTKEVYELESRLHPGLSFEGIQDIGDSLERAILQSILPGEELLAI 94
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
TL N+ + + D+ + L +L+ ELE++I CID + +
Sbjct: 95 ATTLAGTRNLRRVI--------DNQENVPVLNDLVSQLRTYPELEQEIHRCIDERGEVT- 145
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
DRAS+ + IR E ++ + L+ + ++G I + LIT+R R + +KA K
Sbjct: 146 DRASQKMGEIRVELRKIRSQITQKLQNIIQA--KSGAIQEQLITQRSDRFVIPVKAPQKD 203
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P GI + S+SGAT ++EP V N ++ E E AI LT ++A ++
Sbjct: 204 AIP-GIVHDTSTSGATLYIEPSSVVPLGNQLRQIFRKEQTEAEAIRRTLTEKVAAVTPDL 262
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ L+ V +DLA A+A ++ W+ P ++ + I + ++HPLL+
Sbjct: 263 ERLLAIVTTLDLAVAKARYSLWIGSNPPRFINRQD---NEIITLRNLRHPLLVWQQ---- 315
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
NP+ +P+D+ + + RVV ITGPNTGGKT ++
Sbjct: 316 --QHEQGNPV----------------------IPVDLLISPQIRVVTITGPNTGGKTVTL 351
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI---SRIVDI 425
KTLGLA++M+K GL++PA+ +PWF +LADIGD QSL+Q+LSTFSGHI SRI++
Sbjct: 352 KTLGLAAIMAKVGLFVPAREPVEMPWFSQVLADIGDEQSLQQSLSTFSGHIRRISRILEA 411
Query: 426 LE---LVSRES------------------------------------------------- 433
LE + S+ES
Sbjct: 412 LEEKGVRSQESDFDFAQSNGVRRKKEEEEEVRRKEEEEEEEEKEKIKLPIPSPQSPVPSP 471
Query: 434 --LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
LVL+DE+G+GTDP EG ALA ++L+YL + L + +TH+ +L LK ++ +FENA+
Sbjct: 472 QSLVLLDEVGAGTDPVEGSALAIALLKYLANHTQLTMASTHFGELKALKYENPQFENASV 531
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
EF+ TL PTYR+LWG G SNAL+IA +G +++ A+ V E Q +
Sbjct: 532 EFNETTLSPTYRLLWGIPGRSNALSIALRLGLKPEVVAEAKTQVGEATDEVNQ-----VI 586
Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
L +RR E++A A + + LY+E+ D+A L+ R L+A + VQQ + A
Sbjct: 587 AGLEAQRRHQETKAAEAQKILRQAERLYKEVSDKAAALEAREKDLRASQEIAVQQAITQA 646
Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ 671
K +I V++ + +A + ++ ++++ I + + + + + F P+
Sbjct: 647 KGEIAQVIRRLQKGTPNAQDAQ------QATASLSQIAQKY----EPAPPPKPKAGFMPK 696
Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
G++V + LG + A V+ +P D +++G M++ V+ +I + K P P
Sbjct: 697 VGDRVRIPKLG-QTAEVLTIPDADGNFAIRFGIMKMTVQLQDIESLDGQK------PEPI 749
Query: 732 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVL 791
++ + + ++TS+N++DLRG RV + + LD A++ E+ L
Sbjct: 750 VKTKPAPAVVTPPPAPA--------IRTSQNTVDLRGKRVADGEYILDKAIS--EAAGPL 799
Query: 792 FVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYI 834
++IHG GTG +K+ V L+ HPR+ YE + + G T+A+I
Sbjct: 800 WIIHGHGTGKLKQGVHAFLQQHPRITHYEPAAQADGGSGVTIAHI 844
>gi|22300014|ref|NP_683261.1| recombination and DNA strand exchange inhibitor protein
[Thermosynechococcus elongatus BP-1]
gi|22296199|dbj|BAC10023.1| DNA mismatch repair protein [Thermosynechococcus elongatus BP-1]
Length = 811
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 266/829 (32%), Positives = 427/829 (51%), Gaps = 87/829 (10%)
Query: 13 FGKSLEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
G + SQ LL QT+ +A+ + LD S + DI L L +E+ A+
Sbjct: 63 LGGTQAASQVLLAQTAEVIALETVHQVRLDFSQVTDIEPALARLDHQGCLQGTELLAIAH 122
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
L +++ E +L S L +L+ E+ ++I CI + + DR
Sbjct: 123 LLSTARQQRRQIEEHGQL--------SELQQLVAGVRTYPEVTQEIYRCITDQGQVS-DR 173
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
AS EL + +++ + +AG I +P++T+RR R + +KA+HK +
Sbjct: 174 ASP--ELAQIRQQQRQCRAQIQQQLQQILQQRAGAIQEPVVTQRRDRYVLAVKATHKDQI 231
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI ++S+SGAT ++EP+ ++ N +L++ E E AI L+ ++A ++ Y
Sbjct: 232 V-GIVHDLSASGATLYIEPQETIDLQNRLQQLAHQEAEVERAICQALSDQLATISDDLWY 290
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L+D + +D+A ARA ++ W+ G P SQ+ ++++ ++HPLL+
Sbjct: 291 LLDVLTTLDVAVARARYSLWLQGNPPQFVSQTR------LHLKALRHPLLVWQE------ 338
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P+ VPIDI+++ T+VV ITGPNTGGKTA++KT
Sbjct: 339 HHEQGQPV----------------------VPIDIELQPATKVVTITGPNTGGKTATLKT 376
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL---E 427
LGLA+LM+KAGLY+PA LPWF I ADIGD QSL QNLSTFS HI I DIL E
Sbjct: 377 LGLAALMAKAGLYVPAAAPVELPWFTGIWADIGDEQSLTQNLSTFSSHICNIRDILTELE 436
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+ +LVL+DE+G+GTDPSEG ALA ++L+YL + L TTHY +L LK +D+RFE
Sbjct: 437 VTGGNTLVLLDEVGAGTDPSEGTALAIALLRYLAEHASLTFATTHYGELKALKYQDSRFE 496
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ETL PTYR+LWG G SNAL IA+ +G I++ A+ L+ + +
Sbjct: 497 NASVEFDEETLAPTYRLLWGIPGQSNALAIAQRLGLYPSIVEEAKALL-----SKDSNSV 551
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+E+ L+ +R+ E++ AA+L + LY+EI A++L +R L+ ++ +QV+
Sbjct: 552 NEMIMGLVAQRQAQEAKTTAAATLLRDTEALYQEIATRAQELRQRQQQLRQQQEEQVRTA 611
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
L+ A+ +I ++ QL+ A++ E ++ +++A+A I + P +
Sbjct: 612 LHQAQQEIAKII----AQLQRANSPE---QVQAAQTALAQIENNYLPPP-------QPAG 657
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
F PQ G++V ++ ++ V+ V D ++VQ G ++ V P++
Sbjct: 658 FIPQPGDRVRLRQW-QQVGEVLSVSQQGD-IVVQVGAVKFTVP-------PHAVESLQGE 708
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWES 787
P K + + + ++T +LDLRG R EA L+ L
Sbjct: 709 PVHLPSKPKPSSAPSPPTARTTVLA----IRTEDRTLDLRGKRTHEAEPLLEEFLN--RQ 762
Query: 788 RSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP--MNYGCTVAYI 834
+ +++IHG G+G ++ V + L HP V Y P G T+A +
Sbjct: 763 QGTVWIIHGHGSGALRRFVHQFLDQHPSVQSYHLAPPEEGGRGVTIAQL 811
>gi|81299422|ref|YP_399630.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus elongatus PCC 7942]
gi|81168303|gb|ABB56643.1| MutS2 family protein [Synechococcus elongatus PCC 7942]
Length = 796
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 274/838 (32%), Positives = 434/838 (51%), Gaps = 95/838 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P S ES+ LL+QT+ A A+ + P L + + DI L +LS E+ +
Sbjct: 40 LPLASSQAESEYLLSQTAEAQALELTLPQGLPFAGVFDIGEALARVERQAVLSGEELLQI 99
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLII 127
TL A+ + ++L +AAE +P L+ ++ + ELE++I FCI+ +
Sbjct: 100 ASTLAAMRQL-RRLIDAAE--------AAPTLQAIVADLRTYPELEQQIHFCIEDSGEVA 150
Query: 128 LDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
DRAS+ L IR ++++ ++ L+ LL+ + +FQ + +I++R R + +K
Sbjct: 151 -DRASDALLGIRQQQRQVRSQILDRLNRLLRN-QSNLFQ-----ELVISRRSDRYVLPVK 203
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
A K +P GI + SSSG+T ++EP+G +E NN +L E E A+ L+ IA
Sbjct: 204 AGQKEAVP-GIVHDSSSSGSTLYIEPRGVIELNNQLRQLQRREEVECEAVRRRLSEAIAS 262
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+++ L+ +DLA ARA + ++ P ++ S SI + ++HPLLL
Sbjct: 263 VSGDLETLLAIATTLDLAVARARYGLHLEANRPRFTASSE-----SICLRQLRHPLLLWQ 317
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+ D + S VP+ +++ +VV ITGPNTGG
Sbjct: 318 Q--------------RQDPDRSV--------------VPVSFQLQPSLKVVAITGPNTGG 349
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++K+LGLA LM++AGL++PA+ LPWF+ IL DIGD QSL+Q+LSTFSGHI RI
Sbjct: 350 KTVTLKSLGLAGLMARAGLFVPAREPVDLPWFERILTDIGDEQSLQQSLSTFSGHIRRIG 409
Query: 424 DILEL--VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
ILE V+ SLVL+DE+G+GTDPSEG ALA ++L+YL D L + TTHY +L LK
Sbjct: 410 RILEALPVAGASLVLLDEVGAGTDPSEGSALAIALLRYLADHATLTIATTHYGELKALKY 469
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+D RFENA+ EF TL PTYR+LWG G SNAL IA+ +G ++ A+ +E R
Sbjct: 470 QDDRFENASVEFDDRTLSPTYRLLWGIPGRSNALIIAERLGLSPAVVAEARSQLEGGR-- 527
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
+ L +RR E +A AA L + L+ E++ + +L R L+ ++
Sbjct: 528 --DRDVDAVIAGLEAQRRDQEEKAAAAAQLLQQTEKLHAELQAKTAELREREQSLRQQQE 585
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEIN--SLIKESESAIAAIVEAHRPDDDFS 659
+Q E+ A+ ++ VV+ + + A+ S +S S A V A P
Sbjct: 586 VAIQSEIEQARQRVAKVVRRLQQGPKATKAERARQASETLKSLSQPAVTVVAPPP----- 640
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
F PQ G+++ + LG K+ V+ + D + V+ G +++ V ++ +
Sbjct: 641 -------GFQPQLGDRLRIPRLG-KVGEVLAIAPDRQELTVRCGILKLTVSYGDVESLQG 692
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
K + + + P ++T +N+ D+RG RV EA L+
Sbjct: 693 EKVELPPP-------------PPKSTTPPPPPKDAPAIRTDRNTFDVRGSRVSEAEVVLE 739
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
AL ++ +++IHG GTG +++ V + LR HP VAK+E ++ G T+AY K
Sbjct: 740 DALR--QAIGPIWIIHGHGTGKLRQGVQQFLREHPLVAKFEAADQADGGNGVTIAYPK 795
>gi|56750922|ref|YP_171623.1| recombination and DNA strand exchange inhibitor protein
[Synechococcus elongatus PCC 6301]
gi|56685881|dbj|BAD79103.1| DNA mismatch repair protein MutS [Synechococcus elongatus PCC 6301]
Length = 796
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 273/838 (32%), Positives = 434/838 (51%), Gaps = 95/838 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P S ES+ LL+QT+ A A+ + P L + + DI L +LS E+ +
Sbjct: 40 LPLASSQAESEYLLSQTAEAQALELTLPQGLPFAGVFDIGEALARVERQAVLSGEELLQI 99
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLII 127
TL A+ + ++L +AAE +P L+ ++ + ELE++I FCI+ +
Sbjct: 100 ASTLAAMRQL-RRLIDAAE--------AAPTLQAIVADLRTYPELEQQIHFCIEDSGEVA 150
Query: 128 LDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
DRAS+ L IR ++++ ++ L+ LL+ + +FQ + +I++R R + +K
Sbjct: 151 -DRASDALLGIRQQQRQVRSQILDRLNRLLRN-QSNLFQ-----ELVISRRSDRYVLPVK 203
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
A K +P GI + SSSG+T ++EP+G +E NN +L E E A+ L+ IA
Sbjct: 204 AGQKEAVP-GIVHDSSSSGSTLYIEPRGVIELNNQLRQLQRREEVECEAVRRRLSEAIAS 262
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+++ L+ +DLA ARA + ++ P ++ S SI + ++HPLLL
Sbjct: 263 VSGDLETLLAIATTLDLAVARARYGLHLEANRPRFTASSE-----SICLRQLRHPLLLWQ 317
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+ D + S VP+ +++ +VV ITGPNTGG
Sbjct: 318 Q--------------RQDPDRSV--------------VPVSFQLQPSLKVVAITGPNTGG 349
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++K+LGLA LM++AGL++PA+ LPWF+ IL DIGD QSL+Q+LSTFSGHI RI
Sbjct: 350 KTVTLKSLGLAGLMARAGLFVPAREPVDLPWFERILTDIGDEQSLQQSLSTFSGHIRRIG 409
Query: 424 DILEL--VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
ILE V+ SLVL+DE+G+GTDPSEG ALA ++L+YL D L + TTHY +L LK
Sbjct: 410 RILEALPVAGASLVLLDEVGAGTDPSEGSALAIALLRYLADHATLTIATTHYGELKALKY 469
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+D RFENA+ EF TL PTYR+LWG G SNAL IA+ +G ++ A+ +E R
Sbjct: 470 QDDRFENASVEFDDRTLSPTYRLLWGIPGRSNALIIAERLGLSPAVVAEARSQLEGGR-- 527
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
+ L +RR E +A AA L + L+ E++ + +L R L+ ++
Sbjct: 528 --DRDVDAVIAGLEAQRRDQEEKAAAAAQLLQQTEKLHAELQAKTAELREREQGLRQQQE 585
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEIN--SLIKESESAIAAIVEAHRPDDDFS 659
+Q E+ A+ ++ VV+ + + A+ S +S S A V A P
Sbjct: 586 VAIQSEIEQARQRVAKVVRRLQQGPKATKAERARQASETLKSLSQPAVTVVAPPP----- 640
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
F PQ G+++ + LG K+ ++ + D + V+ G +++ V ++ +
Sbjct: 641 -------GFQPQLGDRLRIPRLG-KVGEILAIAPDRQELTVRCGILKLTVSYGDVESLQG 692
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
K + + + P ++T +N+ D+RG RV EA L+
Sbjct: 693 EKVELPPP-------------PPKSTTPPPPPKDAPAIRTDRNTFDVRGSRVSEAEVVLE 739
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
AL ++ +++IHG GTG +++ V + LR HP VAK+E ++ G T+AY K
Sbjct: 740 DALR--QAIGPIWIIHGHGTGKLRQGVQQFLREHPLVAKFEAADQADGGNGVTIAYPK 795
>gi|428220318|ref|YP_007104488.1| MutS2 family protein [Synechococcus sp. PCC 7502]
gi|427993658|gb|AFY72353.1| MutS2 family protein [Synechococcus sp. PCC 7502]
Length = 697
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 247/713 (34%), Positives = 384/713 (53%), Gaps = 65/713 (9%)
Query: 15 KSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+S + SQ+LL QT A L S L L ++DI+G L A +LSP E+ A+ TL
Sbjct: 38 QSYDRSQELLTQTKEAYYLETKLSGGLSLEGVQDISGALARAEVQGVLSPLELFAIATTL 97
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
N+ + L D+ + L L+ + +LE++I CI+ + +L+RAS
Sbjct: 98 AGARNLRRSL--------DNAENCPALQALVSDVRTYPDLEKEIYHCIE-EGGTVLERAS 148
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
E L IR + E + + L+ + + + + + +IT+R R + +KASHK +
Sbjct: 149 EKLGNIRRTSHQVREKIINTLQGIIQR--KNNALQENIITQRGDRYVLSVKASHKDQI-Q 205
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S SG T +EP V NN +L E E IL+ L+A++ ++ L+
Sbjct: 206 GIVHDASGSGLTLLIEPSSVVAGNNDLRQLVAREQREIEIILTQLSAKVTAVAEDLSRLL 265
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS---INIEGIKHPLLLGSSLRSLS 309
+ EIDLA ARA +A W+ P LS S + I + ++HPLL+
Sbjct: 266 AILTEIDLAIARARYAYWLKANPPNLSKSQPQSLSQNPQLITLRNLRHPLLVWQ------ 319
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+ + S TV VP+DI + E +VVVITGPNTGGKTA++K
Sbjct: 320 -----------EQQESGRTV-----------VPVDILISPEIKVVVITGPNTGGKTATLK 357
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T GLA++M+KAG+++PA +PWFDLILADIGD QSL+QNLSTFSGHI RI ILEL+
Sbjct: 358 TFGLAAIMAKAGMFIPAPEPVEIPWFDLILADIGDEQSLQQNLSTFSGHIRRIGRILELI 417
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ SLVL+DE+G+GTDPSEG A+AT++L++L + L + TTH+ +L LK ++ +FENA
Sbjct: 418 TPASLVLLDEVGAGTDPSEGSAIATALLEHLANHANLTIATTHFGELKTLKYQNPQFENA 477
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF L PTY++LWG G SNAL IA+ +G II AQ V + SE
Sbjct: 478 SVEFDDVQLAPTYKLLWGIPGRSNALAIARRLGLPEDIISSAQNHV--------GYGSSE 529
Query: 550 LYQSLME---ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ + E +RR+ + + A L AE+ L++EI D+++ L + L+AK+ +V
Sbjct: 530 INLVIAELETQRRQQTEKTQAATILLAEMEKLHKEISDKSQLLRSQYQELRAKQEIEVTA 589
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV-SETNT 665
+N AK +I V++ + + D+ + +++ + I + H P +
Sbjct: 590 AINQAKKEIARVIRKLQ------AGDQSPQSAQHADNRMTQISKMHLPSQQKQPQANLEP 643
Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEV-PGDDDTVLVQYGKMRVRVKKNNIRPI 717
+ P+ G+QV + L +K+ V+ + + + V+ G M++ VK +I +
Sbjct: 644 IKYIPKLGDQVKIIKL-NKIGQVLSTGTNNSNEIGVRVGGMKMTVKIEDIEAV 695
>gi|87301320|ref|ZP_01084161.1| putative DNA mismatch repair protein MutS family protein
[Synechococcus sp. WH 5701]
gi|87284288|gb|EAQ76241.1| putative DNA mismatch repair protein MutS family protein
[Synechococcus sp. WH 5701]
Length = 800
Score = 354 bits (909), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 264/839 (31%), Positives = 429/839 (51%), Gaps = 89/839 (10%)
Query: 11 IPFGKSLEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P ES +LL +TS L + + L D+ G L G ++ AV
Sbjct: 37 LPLAADRSESLRLLAETSELLGLDGLIEGGLSFQGAADLTGTLRHCAKGGTAGGEDLLAV 96
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
T +AV ++ EA EL P+ +L+ + L ELE+++ FC++ + +
Sbjct: 97 AST-QAVARRLRRQIEAPEL--------RPVCSQLMGDLRTLPELEQRLRFCLE-EGGRV 146
Query: 128 LDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
DRAS +L +R + R+ + L L+++ Q G + +I +R R + +K
Sbjct: 147 ADRASPELAGLRQQLAGLRQLRRDRLQELMRR------QGGLLQDSVIAERNGRPVLAVK 200
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
+ LP G+ + S+SG+T F+EPK + N L E EE +L+ L+A +A+
Sbjct: 201 VTAASQLP-GLVHDSSASGSTVFIEPKAVITLGNQIRELEGRERQEEWRVLASLSALVAE 259
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
++ L ++ +D+A ARA + QW+ V P LS+ + + + ++HPLLL
Sbjct: 260 EAPALEELHRVLVALDVALARARYGQWLGAVRPELSADPQ----APVLLRDLRHPLLLWQ 315
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
R E V VP+ + V E RVV ITGPNTGG
Sbjct: 316 ERR-----------------GGEAKV-----------VPVTVSVGAELRVVAITGPNTGG 347
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++K++GLA+LM++AGL+LP P+LPW L+LADIGD QSL+QNLSTFSGH+ RI
Sbjct: 348 KTVTLKSVGLAALMARAGLFLPCSGTPQLPWCSLVLADIGDEQSLQQNLSTFSGHVRRIA 407
Query: 424 DILELVSRE-----SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
ILE + +LVL+DE+G+GTDP+EG ALA ++L++L +R L + TTH+ +L
Sbjct: 408 RILEALDAPAAPGATLVLLDEVGAGTDPTEGTALAIALLRHLAERARLTIATTHFGELKA 467
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
LK D+RFENA+ F +TL PTY + WG G SNAL IA +G D+ +I A L L
Sbjct: 468 LKYADSRFENASVAFDSDTLSPTYHLQWGIPGRSNALAIASRLGLDQAVIAEANGL---L 524
Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
P R + +++ + L ++RR+ + A AA+L A L+ E+ + ++A L+
Sbjct: 525 AP-RGEGELNQVIRGLEDQRRRQQEAAEEAAALLARTELLHEELLQRWQQQQEQSAELQE 583
Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
+ Q ++ + + ++ +++ +LR D +++ + + H P
Sbjct: 584 QRRQALEHSIRDGQQEVRRIIR----RLRQGGGD--GERARQAGVRLKQLQVEHTPQPQ- 636
Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
TS + P+ GE++ + SLG K A V+E+ D + V+ G +R++V + I +
Sbjct: 637 ---RRATSGWRPEVGERIRLLSLG-KAAQVLEISADGRELSVRCGVLRLQVDLSGIESLQ 692
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
K P + + R G + GP+V++ +N++D+RGMRV EA +
Sbjct: 693 GEKPSPPEPAQPLIEVRASGRHLGGS---------GPQVRSERNTVDVRGMRVHEAEAAV 743
Query: 779 DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+ L + L+VIHG+GTG +K + + L + P V + + GC+V + K
Sbjct: 744 EEQLR--NANGPLWVIHGIGTGKLKRGLRQWLASVPWVERVSDAERGDGGQGCSVIWPK 800
>gi|119483388|ref|ZP_01618802.1| MutS 2 protein [Lyngbya sp. PCC 8106]
gi|119458155|gb|EAW39277.1| MutS 2 protein [Lyngbya sp. PCC 8106]
Length = 879
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 267/914 (29%), Positives = 441/914 (48%), Gaps = 145/914 (15%)
Query: 4 AVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
AVV + +P ++ E+ +LL QT A L + + L L I+DI L +LS
Sbjct: 29 AVVTR-NLPIPQTPSETLELLAQTKEAYQLELQLTSGLSLQGIQDIGDALERVERHGILS 87
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCI 120
E+ + TL + +++ D+ + P+L EL+ ELE++I CI
Sbjct: 88 GEELLNIATTLAGARQLRRQV--------DAHEEEVPVLAELVSELRTYPELEQEIHRCI 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
D + + DRA+ L IR + K + + +L+ + + +AG I + LIT+R R +
Sbjct: 140 DDRGDVT-DRANPKLTDIRIKLKSTRDRIYQILQSILQR--KAGAIQEQLITQRGDRFVI 196
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
+KA KY +P GI + S+ G T ++EPK +E NN +L E EE A+ +L+ +
Sbjct: 197 PVKAPQKYQVP-GIVHDTSAKGGTLYIEPKSTIELNNQLRQLQRREQLEEEAVRQVLSEQ 255
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG---------------VCPILSSQSHVS 285
IA+ + +++ L+ V IDLA +RA + W++ C + S
Sbjct: 256 IAEVQPDLERLLVIVTTIDLAVSRARYGLWLEANPPTFTNLKIQAEKVECVLPSDTDQTR 315
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
F + + + ++HPLL+ + P+ VPID+
Sbjct: 316 FQNPVTLRQLRHPLLVWQQ------QNEQGTPV----------------------VPIDV 347
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
++ RVV ITGPNTGGKT ++KT+G+A+LM+K GL++PA+ LPWFDL+LADIGD
Sbjct: 348 TIKPSIRVVAITGPNTGGKTVTLKTIGMAALMAKVGLFIPAREPVELPWFDLVLADIGDE 407
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS-------GTDPS----------- 447
QS+EQ+LSTFSGHI RI IL + ++ ++++ GTD S
Sbjct: 408 QSIEQSLSTFSGHIRRISRILNAIPSANIGTVNQLSIPVTHQQLGTDDSEVEPVQNQQEE 467
Query: 448 -----------------------------------------EGVALATSILQYLRDRVGL 466
EG ALAT++LQYL + +
Sbjct: 468 VEIIEEVDSLETLKAKIKDPEDQISNSLILLDEIGAGTDPTEGSALATALLQYLANSAVV 527
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
+ TTH+ +L LK +D RFEN++ EF +TL+PTYR+LWG G SNAL IA+ +G +
Sbjct: 528 TIATTHFGELKALKYQDDRFENSSVEFDEKTLQPTYRLLWGIPGRSNALKIAQRLGLKSE 587
Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
I++ A + + +++ L +R++ E++A A+ L E L++E+ +
Sbjct: 588 ILETAASYLGGTSQD-----VNDVIAGLEAQRKQQETKAEEASKLLKETERLHQELIRKT 642
Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV---QDFENQLRDASADEINSLIKESES 643
L R LK ++ Q +++ L AK +I V+ Q + + +DA +++
Sbjct: 643 ALLKEREQELKREQEQAIKETLIQAKGEIAQVIRRLQQGQPKAQDA---------QKATE 693
Query: 644 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
+ I E P E G+++ + S+G + A V+ P ++ ++V++G
Sbjct: 694 TLDKIAEQRLPSRQQKPPEKPKFKPK--VGDRIRIPSIG-QTAEVMNEPDENGQLMVRFG 750
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
M++ + I + K A P + A S E V+TSKN+
Sbjct: 751 IMKMSIGLAEIESLDGQK---AEIPTKSKSSDKAKSSKSEATVSEPEKKA--TVRTSKNT 805
Query: 764 LDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--Q 821
+DLRG R+ EA ++D L + +++IHG GTG ++ V E L+N+P V ++E
Sbjct: 806 IDLRGKRISEAEIEIDRMLGQMIDFAAIWIIHGKGTGQLRRGVQEFLKNNPLVDRFELAT 865
Query: 822 ESPMNYGCTVAYIK 835
++ G T+AY+K
Sbjct: 866 QAEGGAGVTIAYLK 879
>gi|317968912|ref|ZP_07970302.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
CB0205]
Length = 811
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 261/848 (30%), Positives = 431/848 (50%), Gaps = 91/848 (10%)
Query: 6 VQKAQIPFGKSLEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPS 63
V A++P + ++S L +T+ LA+ + L D+ L G + S
Sbjct: 37 VVAARLPLATTRQQSVDWLAETTELLALDGLIEGGLSFQGAADLDHTLQLCAKGGVASGD 96
Query: 64 EICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCK 123
++ +V TL A + +++ + EL + PL L ELE+++ FCI+
Sbjct: 97 DLLSVATTLAAARRLRRQI-DYPELRPVTTALVEPL-------RTLPELEQRLRFCIEDG 148
Query: 124 LLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
+ DRAS L +R + R + L+ L+++ AA + ++ +R R
Sbjct: 149 GRVA-DRASPPLSGLRRQLASVRMERRDRLNELIRRYAALL------QDTVVAERNGRPV 201
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +KA LP G+ + S+SG+T F+EP+ + N +L E E A+L L+A
Sbjct: 202 LAVKAGAGSQLP-GLVHDSSASGSTVFIEPQAVIPLGNRIRQLEGEEREAERAVLQELSA 260
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
+ + + +++L ++++DLA ARA ++ W+ V P L + + + +EG++HPL
Sbjct: 261 LVGEEQPALEHLQQVLIQLDLALARARYSAWLGAVRPELEADPL----APLQLEGLRHPL 316
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
LL R TV VP+ I+VE RVV ITGP
Sbjct: 317 LLWQERR-----------------QGGRTV-----------VPVTIRVESSLRVVAITGP 348
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++K++GLA LM++AGL++P K P +PW +LADIGD QSL+QNLSTFSGH+
Sbjct: 349 NTGGKTVTLKSVGLAVLMARAGLFVPCKGSPHVPWCQQVLADIGDEQSLQQNLSTFSGHV 408
Query: 420 SRIVDILELV----------SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
RI ILE + + LVL+DE+G+GTDP+EG ALA ++L+ L DR L +
Sbjct: 409 RRIARILEALPAAGSDLATQAGAQLVLLDEVGAGTDPTEGTALAIALLKQLADRARLTIA 468
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTH+ +L LK D RFENA+ F +E+L PTY + WG G SNAL IA +G D ++
Sbjct: 469 TTHFGELKALKYDDPRFENASVAFDVESLSPTYHLQWGIPGRSNALAIATRLGLDGAVLD 528
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
AQ L L P R + +++ L +R++ + A AA+L A L+ E+ +
Sbjct: 529 AAQAL---LAP-RGEGELNQVIAGLESQRQRQQEAAEEAAALLARTELLHEELLMRWQQQ 584
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 649
++A L+ + +Q+++ + + ++ +++ + R + E+ + + + +
Sbjct: 585 KEQSAELQEQRREQLERSIRDGQKEVRRIIRRLRHG-RGTGSSELGESARRAGQQLKQLE 643
Query: 650 EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
+ HRP + + + P+ G++V V SLG K V+ + D + V+ G MR+ +
Sbjct: 644 QQHRPLPE----RRDHKGWLPKVGDRVRVLSLG-KAGEVLSLSEDGRELSVRCGVMRLNL 698
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
+ + I + K P P + S S AS GP V+T +N++D+RGM
Sbjct: 699 ELSAIEGLQGEK------PEP-------PQAQVSIRSRRNPASRGPEVRTERNTIDVRGM 745
Query: 770 RVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 827
RV EA ++ L + ++VIHG+GTG +K + E L + P V + +
Sbjct: 746 RVHEAESAVEEHLRG--ANGPVWVIHGIGTGKLKRGLREWLSSVPYVERVTDAAQGDGGQ 803
Query: 828 GCTVAYIK 835
GC+V ++K
Sbjct: 804 GCSVIWVK 811
>gi|254432766|ref|ZP_05046469.1| MutS2 family protein [Cyanobium sp. PCC 7001]
gi|197627219|gb|EDY39778.1| MutS2 family protein [Cyanobium sp. PCC 7001]
Length = 804
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 249/762 (32%), Positives = 383/762 (50%), Gaps = 108/762 (14%)
Query: 102 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVA 157
L+ L ELE+++ F ++ + + DRAS LE +R + R E L LL++ A
Sbjct: 122 LVAELRTLPELEQRLHFALE-EGGRVADRASAPLEAVRRQLKGLRAERRERLQELLRRHA 180
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ +I +R R + +KA LP G+ + S+SG+T F+EP+ + N
Sbjct: 181 PLL------QDTVIAERNGRPVLAVKAGAAAQLP-GLVHDSSASGSTVFVEPQAVISLGN 233
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E E A+L+ L+A + ++ L +L +D A ARA + W+ V P
Sbjct: 234 RLRDLEGRERELEQAVLAELSALVGAEAEALQQLHAVLLRLDAALARARYGAWLGAVRPD 293
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
L + H F ++ + HPLLL R A
Sbjct: 294 LEADPHAPF----SLVDLSHPLLLWQQRREQGHAV------------------------- 324
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VP+ I V E RVV ITGPNTGGKT ++K+LGLA+LM++AGL+LP PRLPW
Sbjct: 325 ---VPVSITVGAELRVVAITGPNTGGKTVTLKSLGLAALMARAGLFLPCSGTPRLPWCGA 381
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE----SLVLIDEIGSGTDPSEGVALA 453
+LADIGD QSL+QNLSTFSGHI RI IL ++ +LVL+DE+G+GTDP EG ALA
Sbjct: 382 VLADIGDEQSLQQNLSTFSGHIRRIARILAALAEPRQGATLVLLDEVGAGTDPVEGSALA 441
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
T++L++L DR L + TTH+ +L LK D RFENA+ F ++TL PTYR+ WG G SN
Sbjct: 442 TALLRHLADRARLTIATTHFGELKALKYADPRFENASVAFDVDTLSPTYRLQWGIPGRSN 501
Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS--- 570
AL IA+ +G ++++AQ L+E + E+ Q ++ LESQ +
Sbjct: 502 ALAIAQRLGLSEAVLEQAQALLE-------PGGEGEVNQVIV----GLESQRQRQQEAAE 550
Query: 571 -----------LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 619
LH E++ + + + + +A L+ + +Q+++ + + ++ ++
Sbjct: 551 EAAALLARTELLHEELLSRWHQQKQQ-------SAELQEQRRRQLERSIREGQQEVRRII 603
Query: 620 QDFENQLRDASA---DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 676
+ Q D SA ++ +++ + + HRP + + P+ G++V
Sbjct: 604 RRL-RQGGDRSAAGRGQLGETARQAGQRLKQLEHQHRPAPE----RREHGGWMPEVGDRV 658
Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 736
V SLG K A V+ + + V+ G MR+ V I + K PAP L
Sbjct: 659 RVLSLG-KAAEVLALADGGRELTVRCGVMRLTVPLEGIEGLQGEK------PAPPL---P 708
Query: 737 EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHG 796
E R G G S GP V+T +N++D+RG+RV EA ++ L + ++VIHG
Sbjct: 709 EVRIKGPRGLG----SRGPDVRTERNTVDVRGLRVHEAEAVVEEHLRG--ASGPVWVIHG 762
Query: 797 MGTGVVKERVLEILRNHP---RVAKYEQESPMNYGCTVAYIK 835
+GTG +K + + L P RVA Q GC+V +++
Sbjct: 763 IGTGKLKRGLRQWLTTVPYVDRVADAAQ-GDGGAGCSVIHLR 803
>gi|33866463|ref|NP_898022.1| DNA mismatch repair protein MutS family protein [Synechococcus sp.
WH 8102]
gi|33633241|emb|CAE08446.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
WH 8102]
Length = 812
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 265/847 (31%), Positives = 431/847 (50%), Gaps = 92/847 (10%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
MG + +P ++LE S++ L +T A L + L ++D+ +L G
Sbjct: 46 MGRDAARNLVLP--ETLEASRQRLAETVEMAVLDDLTEGGLSFRGVQDLTPVLLRCSKGG 103
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+ + E+ AV TL A + +++ E S L+ L ELE+++ F
Sbjct: 104 VATGEELLAVAETLAAARRLRRQIDEPELRPACS--------ALIDTMVTLPELEQRLKF 155
Query: 119 CIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
I+ + I DRAS L +R + R+ + L LL+++A F + +I +R
Sbjct: 156 SIE-EGGRIADRASAPLAWLRQQWHGLRQERRDKLQDLLRRLAP--F----LQDSVIAQR 208
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA +P G + S+SG+T F+EP+ + N L EE +L
Sbjct: 209 HGRPVLAVKAGAVAQVP-GQVHDSSASGSTVFVEPRSVLTIGNRLTDLEGRIRDEERKVL 267
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
L+A +A + L+ +L++DLA AR + +++ G P + + + F E
Sbjct: 268 IELSAVVADDHPVLLQLVSILLQLDLALARGRYGRFLGGTAPRMEASAAAPF----RFET 323
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
++HPLL+ R+ A VPI ++V + RVV
Sbjct: 324 LRHPLLVWQHKRAGGPAV----------------------------VPISMEVSVDLRVV 355
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
ITGPNTGGKT ++K++GLASLM++AGL LP P LPW +LADIGD QSL+Q+LST
Sbjct: 356 AITGPNTGGKTVTLKSIGLASLMARAGLLLPCAGMPTLPWCAQVLADIGDEQSLQQSLST 415
Query: 415 FSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
FSGHI RI ILE + +LVL+DE+G+GTDPSEG ALATS+L+ L DR L + TT
Sbjct: 416 FSGHIKRIGRILEALQSGPSPALVLLDEVGAGTDPSEGTALATSLLKALADRARLTIATT 475
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
H+ +L LK D RFENA+ F+ ETL PTY +LWG G SNAL IA +G D ++++ A
Sbjct: 476 HFGELKALKYNDARFENASVAFNAETLSPTYELLWGIPGRSNALAIASRLGLDDQVLEEA 535
Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
+L L P S + + L E+R++ ++ A AA+L A L+ E+ + +
Sbjct: 536 SQL---LAPAADGEVNS-VIRGLEEQRQRQQAAAEDAAALLARTELLHDELLQRWQKQKQ 591
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA 651
++A + + Q++++ + + ++ ++++ +LRD AD + + + + +
Sbjct: 592 QSAERQEQGRQRLERSIRDGQKEVRSLIR----RLRDDRAD--GETARRAGQRLRRLEDR 645
Query: 652 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
HRP+ + + P+ GE++ + +LG K A V+ + D + V+ G MR V+
Sbjct: 646 HRPEPE---RRQPLPGWRPEPGERIRLLALG-KAAEVLAISDDGMQLTVRCGVMRSTVEL 701
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
+ + + K + A P ++ ++ G +V+TS+N+LD+RGMRV
Sbjct: 702 SGVESLDGRKPEPPAKPVVKV-------------NARINPGSGAQVRTSRNTLDVRGMRV 748
Query: 772 EEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP---RVAKYEQESPMNYG 828
EA ++ L + ++VIHG+GTG +K + L P RV EQ G
Sbjct: 749 HEAEAAVEEHLRG--ANGPVWVIHGIGTGKLKRGLRAWLETVPYVERVTDAEQ-GDGGGG 805
Query: 829 CTVAYIK 835
C+V +++
Sbjct: 806 CSVVWVR 812
>gi|260434383|ref|ZP_05788353.1| MutS2 family protein [Synechococcus sp. WH 8109]
gi|260412257|gb|EEX05553.1| MutS2 family protein [Synechococcus sp. WH 8109]
Length = 799
Score = 341 bits (875), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 269/837 (32%), Positives = 434/837 (51%), Gaps = 92/837 (10%)
Query: 12 PFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
P SLEES++ L +T A L + L ++++ ++ G + S E+ AV
Sbjct: 42 PLPASLEESKQRLAETVEMAVLDDLTEGGLSFRGVQNLEPVVLRCSKGGVASGEELLAVA 101
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIIL 128
TL A + ++ T+ EL P+ L++ L ELE+++ F ++ + +
Sbjct: 102 ETLAAARRL-RRQTDDPEL--------RPVCTALIETMVTLPELEQRLKFALE-EGGRVA 151
Query: 129 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
DRAS L +R + R+ + L LL+++A + + +I +R R + +KA
Sbjct: 152 DRASSALSALRHQWNGLRQERRDKLQELLRRLAPSLQDS------VIAERHGRPVLAVKA 205
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+P G + S+SG+T F+EP+ + N V L + EE +L+ L+A +A+
Sbjct: 206 GAVSQVP-GQVHDSSASGSTLFVEPRSVLTMGNKLVELESRIRDEERKVLAELSALVAEE 264
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ ++ + +DLA AR + +W+ GV P L + S F G++HPLL+
Sbjct: 265 ASVLNQVVAVLRALDLALARGRYGRWLGGVEPQLEAASEAPF----RFSGLRHPLLVWQH 320
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
R+ + P+ VPI ++V E RVV ITGPNTGGK
Sbjct: 321 KRA------DGPPV----------------------VPISLEVSPELRVVAITGPNTGGK 352
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++K++GLA+LM++AG+ LP P LPW +LADIGD QSL+Q+LSTFSGH+ RI
Sbjct: 353 TVTLKSIGLAALMARAGMLLPCSGQPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGR 412
Query: 425 ILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
ILE + R +LVL+DE+G+GTDPSEG ALAT++L+ L DR L + TTH+ +L LK
Sbjct: 413 ILEALHRGGSPALVLLDEVGAGTDPSEGTALATALLKALADRARLTIATTHFGELKALKY 472
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
D RFENA+ F+ ETL PTY +LWG G SNAL IA +G D ++ +AQ+L L P
Sbjct: 473 DDARFENASVAFNPETLSPTYELLWGIPGRSNALAIATRLGLDSDVLHQAQQL---LAPG 529
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
S + + L E+R++ ++ A AA+L A L+ E+ + ++ A + +
Sbjct: 530 GDGEVNS-VIRGLEEQRQRQQAAAEDAAALLARTELLHEELLQRWQKQKQQTAQRQEQGR 588
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
Q+++Q + + ++ T+++ +LRD AD +++ + ++ + HRP +
Sbjct: 589 QRLEQSIRQGQKEVRTLIR----RLRDERAD--GETARKAGQRLRSLEDHHRPTPERRAP 642
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
+ + P G++V + +LG K A V+ + D + V+ G MR V + + K
Sbjct: 643 KPG---WRPSVGDRVRLLALG-KAADVLAITDDGLQLTVRCGVMRTTVDLAAVESLDGRK 698
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 781
+ Q+ S G G +V+TS+N+LD+RGMRV EA ++
Sbjct: 699 PEPPPK-------PVVKVQARSVGGG------GAQVRTSRNTLDVRGMRVHEAEAAVEEC 745
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHP---RVAKYEQESPMNYGCTVAYIK 835
L C + ++VIHG+GTG +K + L P RV EQ GC+V +++
Sbjct: 746 LRC--ADGPVWVIHGIGTGKLKRGLRAWLDTVPYVERVTDAEQ-GDGGPGCSVVWVR 799
>gi|78212059|ref|YP_380838.1| MutS2 family protein [Synechococcus sp. CC9605]
gi|78196518|gb|ABB34283.1| MutS2 family protein [Synechococcus sp. CC9605]
Length = 799
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 263/836 (31%), Positives = 428/836 (51%), Gaps = 90/836 (10%)
Query: 12 PFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
P SL+ES++ L +T A L + L ++++ ++ G + S E+ AV
Sbjct: 42 PLPASLDESKQRLAETVEMAVLNDLTEGGLSFRGVQNLEPVVLRCSKGGVASGEELLAVA 101
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
TL A + +++ D + L++ L ELE+++ F ++ + + D
Sbjct: 102 ETLAAARRLRRQI--------DDPELRPVCTALIETMVTLPELEQRLKFALE-EGGRVAD 152
Query: 130 RASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
RAS L +R + R+ + L LL+++A + + +I +R R + +KA
Sbjct: 153 RASSALSALRHQWNGLRQERRDKLQELLRRLAPSLQDS------VIAERHGRPVLAVKAG 206
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
+P G + S+SG+T F+EP+ + N L + EE +L+ L+A +A+
Sbjct: 207 AVSQVP-GQVHDSSASGSTIFVEPRSVLTMGNKLAELESRIRDEERKVLAELSALVAEEA 265
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ ++ + +DLA AR + +W+ GV P L + F S G++HPLL+
Sbjct: 266 SALNQVVAVLRTLDLALARGRYGRWLGGVEPQLEPAAEAPFRFS----GLRHPLLVWQHK 321
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
R+ + P+ VPI ++V E RVV ITGPNTGGKT
Sbjct: 322 RA------DGPPV----------------------VPISVEVSPELRVVAITGPNTGGKT 353
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++K++GLA+LM++AG+ LP P LPW +LADIGD QSL+Q+LSTFSGH+ RI I
Sbjct: 354 VTLKSIGLAALMARAGMLLPCSGQPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGRI 413
Query: 426 LELVSRES---LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
LE + R S LVL+DE+G+GTDPSEG ALAT++L+ L DR L + TTH+ +L LK
Sbjct: 414 LEALQRGSAPALVLLDEVGAGTDPSEGTALATALLKALADRARLTIATTHFGELKALKYD 473
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D RFENA+ F+ ETL PTY +LWG G SNAL IA +G D ++ +AQ+L L P
Sbjct: 474 DARFENASVAFNPETLSPTYELLWGIPGRSNALAIATRLGLDSDVLHQAQQL---LAPGG 530
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
S + + L E+R++ ++ A AA+L A L+ E+ + ++ A + + Q
Sbjct: 531 DGEVNS-VIRGLEEQRQRQQAAAEDAAALLARTELLHEELLQRWQKQKQQTAQRQEQGRQ 589
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
+++Q + + ++ T+++ +LRD AD + + + ++ + HRP + +
Sbjct: 590 RLEQSIRQGQKEVRTLIR----RLRDERAD--GETARRAGQRLRSLEDHHRPTPERRAPK 643
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ P G+ V + +LG K A V+ + D + V+ G MR V + + K
Sbjct: 644 PG---WRPAVGDHVRLLALG-KAADVLAITDDGLQLTVRCGVMRTTVDLTAVESLDGRKP 699
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
+ + R +G G+ +V+TS+N+LD+RGMRV EA ++ L
Sbjct: 700 EPPPK----PVVKVHARSAGGGGT---------QVRTSRNTLDVRGMRVHEAEAAVEECL 746
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHP---RVAKYEQESPMNYGCTVAYIK 835
+ ++VIHG+GTG +K + L P RV EQ GC+V +++
Sbjct: 747 RS--ANGPVWVIHGIGTGKLKRGLRAWLDTVPYVERVTDAEQ-GDGGPGCSVVWVR 799
>gi|403379972|ref|ZP_10922029.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. JC66]
Length = 788
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 252/804 (31%), Positives = 424/804 (52%), Gaps = 128/804 (15%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I D+ + A G LL+P+E+ TL G L+R+ +L++
Sbjct: 68 IRDVRPSVKRAKIGGLLNPAELLDTANTLNG---------------GRRLKRF--ILQMA 110
Query: 104 KNCNFLTELEEKIGFCIDCKLLI------------ILDRASEDLELIRAERK----RNME 147
++ LT L +K +D K L ++D AS++L IR E + R E
Sbjct: 111 EDHE-LTLLADKAAQVMDLKDLADSILAKINEHAEVMDSASQELARIRQELRTGEARIRE 169
Query: 148 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 207
L+ +++ + Q + P+IT R R + +K ++ + G+ + S+SGAT FM
Sbjct: 170 KLEQMIRTPSTQKM----LQDPIITIRNDRYVIPVKQEYRSSI-GGMIHDQSASGATLFM 224
Query: 208 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 267
EP+ V+ NN LS E E IL +LTAE+A++ EI + +D + E+D FA+AG
Sbjct: 225 EPQAVVQLNNRLRELSFKEEREIEKILGMLTAEVAEAADEIAFNLDILAELDFIFAKAGL 284
Query: 268 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 327
A+ P+++ + + I+ +HPL+
Sbjct: 285 AREFKATLPLMNDRGF------LKIKKGRHPLI--------------------------- 311
Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
+D VP+D+++ + + ++ITGPNTGGKT ++KT+GL SLM+ +GL++PA+
Sbjct: 312 --------AADAVVPLDVELGNQFQSIIITGPNTGGKTVTLKTIGLLSLMAMSGLFVPAE 363
Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
+ +L FD I ADIGD QS+EQ+LSTFS H++ I+ IL+ ++ +SLVL+DE+G+GTDP+
Sbjct: 364 DSSQLCVFDGIFADIGDEQSIEQSLSTFSSHMTNIISILKEMTPKSLVLLDEVGAGTDPA 423
Query: 448 EGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
EG ALA SIL+ + R+G +V TTHY++L + NA+ EF ++TL PTYR+L
Sbjct: 424 EGSALAISILEAIH-RLGCRMVATTHYSELKAYAYERKGIVNASMEFDVQTLSPTYRLLV 482
Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR 566
G G SNA IA+ +G D+KII A+ V R + +L E R E++ +
Sbjct: 483 GVPGRSNAFAIAERLGLDKKIIDHARSQV-----GADDQRVESMIATLEENRLSAEAERK 537
Query: 567 TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 626
+A L+AE+ L +++E E ++++ + L AK QQ ++ + A+ + + +++ +L
Sbjct: 538 SAEQLNAEVAALRQQLEKERSRMEQQRSQLLAKAEQQAEEAVKKARQEAEQIIR----EL 593
Query: 627 RDASADEINSLIKESESAIAAIVEAHRPDDD---------FSVSETNTSSFTPQFGEQVH 677
R + +E +S IKE + ++EA R D+ S S + + + + G++V
Sbjct: 594 RQMAMEERSS-IKEHK-----LIEAKRKLDEAVPQLDKKPVSGSRSGSKARAIEPGDEVL 647
Query: 678 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 737
V+SLG K VVE+ GD + V VQ G M++++ K ++ I + AP QQ+
Sbjct: 648 VRSLGQK-GHVVELSGDKE-VTVQLGIMKMKIAKTDLEKI---------SAAPVKPVQQK 696
Query: 738 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 795
+G S +E + ++ LDLRG +E++ ++D L + + +++IH
Sbjct: 697 TAVTGLKRSRDE---------SVRSELDLRGNNIEDSIIEVDRFLDESFLANLHQVYIIH 747
Query: 796 GMGTGVVKERVLEILRNHPRVAKY 819
G GTGV+++ + + LR H V +
Sbjct: 748 GKGTGVLRQGIQDYLRKHRLVKSF 771
>gi|148241412|ref|YP_001226569.1| mismatch repair ATPase [Synechococcus sp. RCC307]
gi|147849722|emb|CAK27216.1| Mismatch repair ATPase (MutS family) [Synechococcus sp. RCC307]
Length = 793
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 256/838 (30%), Positives = 421/838 (50%), Gaps = 97/838 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
+ +LEE+Q+ +T+ L + LS G+ + +++ QL S
Sbjct: 36 LQLAPTLEEAQRRQTETTELLVLDGLTEGGLS----FQGVSDHSITVQLCSKGGCAGADE 91
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
L+ + + ++D D L+ + LL+ L ELE+++ F I+ + + DR
Sbjct: 92 LLQLADTLAAARRLRRQIDDDELRPVTT--ALLEGLRTLPELEQQLRFAIE-EGGRVADR 148
Query: 131 ASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
AS L +R ++R+ L L+++ A Q+ +I +R R + +KA
Sbjct: 149 ASPPLAGLRRQLQSQRQERQSRLQELMRRWANQL------QDSVIAQRHGRPVLAVKAGA 202
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
L G + S+SG T F+EP+ V N L E EE +L L+A +A
Sbjct: 203 AGSL-QGQVHDSSASGNTLFIEPQAVVGLGNRIAELEAQEQKEERRVLLQLSAAVAAEGD 261
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ + D + ++DL ARA + W+ + P L ++S ++ ++HPLL+ +
Sbjct: 262 SLMAMQDCLAQLDLGLARARYGAWLGAIKPKLGTESW-------QLKDLRHPLLVWQERQ 314
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
A VP+ +++E RVV ITGPNTGGKT
Sbjct: 315 EAGTAV----------------------------VPVSLQIEPPLRVVAITGPNTGGKTV 346
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++K+LGLA+LM+++GL+LP P+LPW + +LADIGD QSL+QNLSTFSGH+ RI IL
Sbjct: 347 TLKSLGLATLMARSGLFLPCSGTPQLPWCEAVLADIGDEQSLQQNLSTFSGHVRRIARIL 406
Query: 427 ELVSR------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
E +SR +LVL+DE+G+GTDPSEG ALAT++L++L D+V L+V TTH+ +L LK
Sbjct: 407 EALSRLGAAPVPALVLLDEVGAGTDPSEGAALATALLRHLADQVQLSVATTHFGELKALK 466
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
D+RFENA+ EF +LRPTYR+LWG G SNAL +A+ +G ++ A++L++
Sbjct: 467 YDDSRFENASVEFDEVSLRPTYRLLWGIPGRSNALAVARRLGLSEAVLGGAEQLMD---- 522
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
E+ + + L E+R++ + A AA+L L+ E++ + ++ + +
Sbjct: 523 EQGTSSVNTVISGLEEQRQRQQEAAEEAAALLMRAELLHEELQQRWQQEQQQKQARQGEA 582
Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 660
QQ+ + + ++ +++ N D A ++ + ++ + H P+ S
Sbjct: 583 QQQLVGSIREGRKEVRQLIRRLRNPKADGEA------ARQVGQRLRSLEQEHAPE---SR 633
Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
+ ++P G++V + SLG K A V+ D + V+ G MR+ V I +
Sbjct: 634 PQRQHRGWSPAAGDRVRLLSLG-KAAEVLSCSDDGQELQVRCGVMRLTVPLTGIEGLQGE 692
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
K R+ Q R+S SA V+TS+N++D+RG+RV EA ++
Sbjct: 693 KPAPPEPAPVRI--QGRGRRSDSA------------VRTSRNTVDVRGLRVHEAEAAVEE 738
Query: 781 ALACWESRSV---LFVIHGMGTGVVKERVLEILRNHPRVAKY--EQESPMNYGCTVAY 833
L RSV L+VIHG+GTG +K + E L + + ++ GCTV +
Sbjct: 739 QL-----RSVHGPLWVIHGVGTGRLKRGLREWLSGLDYIERLVDAEQGDGGAGCTVVW 791
>gi|124022099|ref|YP_001016406.1| DNA mismatch repair protein MutS [Prochlorococcus marinus str. MIT
9303]
gi|123962385|gb|ABM77141.1| putative DNA mismatch repair protein MutS family protein
[Prochlorococcus marinus str. MIT 9303]
Length = 828
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 250/807 (30%), Positives = 412/807 (51%), Gaps = 92/807 (11%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L + D+ IL G + S E+ AV TL A + +++ + +
Sbjct: 102 LSFQGVHDLGHILARCTKGGVASGEELLAVADTLAAARRLRRQINDP--------ELRPT 153
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
+ LL + + ELE ++ F ++ + + DR S L +R + R+ + L +++
Sbjct: 154 ISALLLDVATMPELERRLKFALE-EGGRVADRVSSKLAGLRRQWQGLRQERRDCLQEVIR 212
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ AA + +I R R + +KA+ LP G+ + S+SG+T F+EP+ +
Sbjct: 213 RHAAML------QDTVIADRHGRPVLAVKAAAVSQLP-GLVHDSSASGSTVFVEPQVVIT 265
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
+N L ++ +L+ L+A +A+S I L + +L++DLA AR + QW+ GV
Sbjct: 266 LSNRLAELDGHIREQQQLVLAELSAAVAESGVSISRLGEVLLQLDLALARGRYGQWLGGV 325
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P L +++ F +++ ++HPLL+ R E+ E V
Sbjct: 326 PPALHAEAAAPF----SLQELRHPLLVWQHRR----------------EHGEAVV----- 360
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
PI ++V +VV ITGPNTGGKT ++K++GLA LM++AGL LP P +PW
Sbjct: 361 -------PISVEVSSTLKVVAITGPNTGGKTVTLKSVGLALLMARAGLLLPCTGSPSMPW 413
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELV---SRESLVLIDEIGSGTDPSEGVA 451
+LADIGD QSL+QNLSTFSGH+ RI ILE + +LVL+DE+G+GTDPSEG A
Sbjct: 414 CAQVLADIGDEQSLQQNLSTFSGHVKRIGRILEALIEGPGPALVLLDEVGAGTDPSEGTA 473
Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
LAT++L+ L DR L + TTH+ L LK D+RFENA+ F ET+ PTYR+ WG G
Sbjct: 474 LATALLRTLADRARLTIATTHFGKLKALKYGDSRFENASVAFDSETMLPTYRLQWGIPGR 533
Query: 512 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
SNAL+IA +G D +I +AQ+L+ +E+ + L E+R ++ A AA+L
Sbjct: 534 SNALSIAMRLGLDDAVIAQAQELLGPC----GDGEVNEVIRGLEEQRSLQQAAAEDAAAL 589
Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
A L+ E+ + +++A L+ + Q+++ + + ++ +++ +LR+ A
Sbjct: 590 LARTELLHEELLSRWQKQRKQSADLQEQGRQKLESSIREGQKEVRQLIR----RLREGRA 645
Query: 632 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS--SFTPQFGEQVHVKSLGDKLATVV 689
D ESA A R D + + P+ GE++ + +LG K A V+
Sbjct: 646 D--------GESARRAGQRLRRIQADHRIQPQRKQHIGWRPEVGERIRLLALG-KAAEVI 696
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
+ D + V+ G MR V+ + + + K P+P + +SG
Sbjct: 697 AISEDGKQLTVRCGVMRSTVELSGVESLDGLK------PSPPELVVKVKVRSG------- 743
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEI 809
G V+T++N++D+RG+RV EA ++ L S ++VIHG+G+G +K + +
Sbjct: 744 -LGRGTEVRTTRNTVDVRGLRVHEAEVAVEEHLRS--STGPIWVIHGIGSGKLKRGLRQW 800
Query: 810 LRNHPRVAKYE--QESPMNYGCTVAYI 834
L P V + +S GC+V ++
Sbjct: 801 LETVPYVERVNDADQSDGGAGCSVIWL 827
>gi|124025008|ref|YP_001014124.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. NATL1A]
gi|123960076|gb|ABM74859.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. NATL1A]
Length = 804
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 259/841 (30%), Positives = 429/841 (51%), Gaps = 111/841 (13%)
Query: 15 KSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
++L SQ+LL+QT +L ++ + + D+ IL G + ++ V TL
Sbjct: 52 RNLSLSQELLSQTLEIGSLDSSLNEGISFDGVHDLENILLICSKGGIAIGEDLLKVADTL 111
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
RA + K + + Q P L ELLK+ L +L++ + F +D + I DRA
Sbjct: 112 RAARKLRKLIFD---------QVIRPRLSELLKDVATLPDLQKLLEFGLD-EGGRIADRA 161
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYL 189
S L +R R RN L K + I + G + +I++R R + KA
Sbjct: 162 SPKLSELR--RYRNSVRLQR--KDILQDIIRKYGGLLQDNIISERYGRPVLAFKAGTSDQ 217
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA-EETAILSLLTAEIAKSEREI 248
+ G+ + S+SG T ++EP+ + N ++ +SEI+ EE +L+ + E+ + I
Sbjct: 218 IK-GMVHDSSASGNTIYVEPQVVISIGNRLAKI-DSEISDEERRLLADWSKEVGLNAIVI 275
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+L++ +L+I+ A +RA +++W++GV IL + H F+ I+ +HPLL+ +
Sbjct: 276 AHLVEILLQIEFALSRARYSKWLNGVPAILDQEEHSLFE----IKDFRHPLLVWN----- 326
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
D + TV VP V + +VV ITGPNTGGKT ++
Sbjct: 327 ------------DFHEKKNTV-----------VPTSFDVAPDLKVVAITGPNTGGKTVAL 363
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI---SRIVDI 425
K++GLA LM+KAGL LP PRLPW + ADIGD QSL+QNLSTFSGHI SRI+D
Sbjct: 364 KSIGLAVLMAKAGLLLPCTGSPRLPWCKNVFADIGDEQSLQQNLSTFSGHILRISRILDA 423
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+++ +LVL+DE+G+GTDP+EG ALA ++LQ + +R L + TTH+ L LK D+R
Sbjct: 424 IDVFPGTTLVLLDEVGAGTDPTEGTALAMALLQVMANRARLTIATTHFGQLKALKYSDSR 483
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
FENA+ F ET++PT+ + WG G SNA+ I+K +G D ++I AQK + PER +
Sbjct: 484 FENASVSFDSETIQPTFHLQWGIPGRSNAIEISKRLGLDEQVIISAQKFIN---PERVDN 540
Query: 546 RKSELYQSLMEERRKLESQARTAAS-------LHAEIMDLYREIEDEAKDLDRRAAHLKA 598
+++ Q L ++R + +S A AA+ LH E+++ +++ ++++ + +
Sbjct: 541 -VNQVIQGLEKQRERQQSAAEDAAALLAKTELLHEELLNSWQKQRQQSEEFNEQGRFKLE 599
Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
++ Q+E V+ +LRD +A + I + + I + +R D
Sbjct: 600 SSIREGQKE-----------VRHLIKRLRDQNASGETARI--AGQRLRQIEKGYRNDKRI 646
Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
+ +T S+TP+ GE+V + S+G K ++ D + V G R +V + +
Sbjct: 647 N----HTQSWTPKIGEKVRLSSIG-KAGEIISFSDDGMQLTVLCGVFRSKVNLTEVESLD 701
Query: 719 NSK---RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
K +N ++RK V+T KN+LD+RG+RV EA
Sbjct: 702 GQKVEINQNVQVKTSQVRKNLS------------------LVRTKKNTLDVRGLRVHEAE 743
Query: 776 HQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY--GCTVAY 833
++ L L+VIHG+G+G +K+ + + + P + K P + GC+V +
Sbjct: 744 GVIEEKLR--NCSGALWVIHGIGSGKLKKGLRKWFDSLPYIEKVADAEPHDGGPGCSVVW 801
Query: 834 I 834
+
Sbjct: 802 M 802
>gi|352095971|ref|ZP_08956918.1| MutS2 protein [Synechococcus sp. WH 8016]
gi|351677327|gb|EHA60476.1| MutS2 protein [Synechococcus sp. WH 8016]
Length = 805
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 251/808 (31%), Positives = 418/808 (51%), Gaps = 92/808 (11%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L + D+ +L G S E+ +V TL A + +++ D D S
Sbjct: 79 LSFQGVSDLEMVLLRCCKGGTASGEELLSVAHTLAAARRLRRQID-----DPDLRPDCSA 133
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
LLE N L ELE+++ F ++ + + +RASE LE +R + R+ + L ++L+
Sbjct: 134 LLE---NVATLPELEQRLKFALE-EGGRVANRASESLEELRLQWQVARQERRDRLQAVLR 189
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ + + A +I +R R + +KA P G+ + SSSG T F+EPK +
Sbjct: 190 RWTSLLQDA------VIAERHGRPVLAVKAGAASQCP-GMVHDSSSSGNTVFVEPKTVIG 242
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
N L EE +L+ L+A +A+ I LM +L++DLA AR + QW+ V
Sbjct: 243 LGNRLAALDGRIREEERRVLAELSAAVAEQNDAIARLMAVLLKLDLALARGRYGQWLGAV 302
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P L +Q D+ I ++HPLL+ + A +
Sbjct: 303 PPRLDAQP----DAPFQILELRHPLLVWQQRKEGGAPVVPVS------------------ 340
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
++V + RVV ITGPNTGGKT ++K++GLA+LM++AG+++P K P LPW
Sbjct: 341 ----------VEVSEQLRVVAITGPNTGGKTVTLKSIGLAALMARAGMWIPCKGSPSLPW 390
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS---RESLVLIDEIGSGTDPSEGVA 451
+LADIGD QSL+Q+LSTFSGH+ RI IL+ ++ +LVL+DE+G+GTDPSEG A
Sbjct: 391 CAQVLADIGDEQSLQQSLSTFSGHVKRIGSILQSIASGPSPALVLLDEVGAGTDPSEGTA 450
Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
LA ++L+ L + L + TTH+ +L LK D+RFENA+ F +TL PTY++LWG G
Sbjct: 451 LAIALLRNLANCARLTIATTHFGELKALKYSDSRFENASVAFDSDTLSPTYQLLWGIPGR 510
Query: 512 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
SNAL IA +GFD +I++A++L L+P + + + L E+R++ ++ A AA+L
Sbjct: 511 SNALAIATRLGFDSDVIEQARQL---LKPSGDGDVNA-VIRGLEEQRQRQQAAAEDAAAL 566
Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-S 630
A L+ E+ + + +A + Q+++ + + ++ +++ +Q D +
Sbjct: 567 LARTELLHEELLQRWEQQRKNSAQQQELGRQRLESSIRDGQKEVRHLIRRLRDQKADGET 626
Query: 631 ADEINSLIKESESAIAAIVE-AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
A +++ ES ++ E H P+ + P GE++ + +L DK A V+
Sbjct: 627 ARRAGQRLRKLESNHRSVPERRHHPE------------WRPSVGERIRLLAL-DKAAEVL 673
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
EV D + V+ G MR V +++ + + + AA P + + + R G
Sbjct: 674 EVSDDGQQLSVRCGVMRSMV---DLQAVESLDGRRAAPPEKPVVQVKARRGVG------- 723
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEI 809
G +V+TS+N++D+RG RV EA ++ L + ++VIHG+GTG +K + +
Sbjct: 724 ----GSQVRTSRNTVDVRGQRVHEAEAAVEELLRG--ANGPVWVIHGIGTGRLKRGLRQW 777
Query: 810 LRNHPRVAKY--EQESPMNYGCTVAYIK 835
L + P V + + GC+V +++
Sbjct: 778 LDSLPYVERVGDADQGDGGPGCSVVWVR 805
>gi|33863813|ref|NP_895373.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9313]
gi|33635396|emb|CAE21721.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9313]
Length = 828
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 247/807 (30%), Positives = 409/807 (50%), Gaps = 92/807 (11%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L + D+ IL G + S E+ AV TL A + +++ + +
Sbjct: 102 LSFQGVHDLGHILARCSKGGVASGEELLAVADTLAAARRLRRQINDP--------ELRPT 153
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
+ LL + + ELE ++ F ++ + + DR S L +R + R+ + L +++
Sbjct: 154 ISSLLLDVATMPELERRLKFALE-EGGRVADRVSSKLAGLRRQWQGLRQERRDCLQEVVR 212
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ AA + +I R R + +KA+ LP G+ + S+SG+T F+EP+ +
Sbjct: 213 RHAAML------QDTVIADRHGRPVLAVKAAAVSQLP-GLVHDSSASGSTVFVEPQVVIT 265
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
+N L ++ +L+ L+A +A++ I L + +L++DLA AR + QW+ GV
Sbjct: 266 LSNRLAELDGRIREQQQLVLAELSAAVAEAGVSIGRLAEVLLQLDLALARGRYGQWLGGV 325
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P L +++ F +++ ++HPLL+ R A
Sbjct: 326 PPTLHAEAAAPF----SLQELRHPLLVWQHRRDHGEAV---------------------- 359
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
VPI ++V +VV ITGPNTGGKT ++K++GLA LM++AGL LP P +PW
Sbjct: 360 ------VPISVEVSSTLKVVAITGPNTGGKTVTLKSVGLALLMARAGLLLPCTGSPSMPW 413
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVA 451
+LADIGD QSL+QNLSTFSGH+ RI ILE ++ +LVL+DE+G+GTDPSEG A
Sbjct: 414 CAQVLADIGDEQSLQQNLSTFSGHVKRIGCILEALNEGPGPALVLLDEVGAGTDPSEGTA 473
Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
LAT++L+ L DR L + TTH+ L LK D+RFENA+ F ET+ PTYR+ WG G
Sbjct: 474 LATALLRTLADRARLTIATTHFGKLKALKYGDSRFENASVAFDGETMLPTYRLQWGIPGR 533
Query: 512 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
SNAL+IA +G D +I AQ+L+ +E+ + L E+R ++ A AA+L
Sbjct: 534 SNALSIAMRLGLDGAVIAHAQELLGPC----GDGEVNEVIRGLEEQRSLQQAAAEDAAAL 589
Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
A L+ E+ + +++A L+ + Q+++ + + ++ +++ +LR+ A
Sbjct: 590 LARTELLHEELLSRWQKQRKQSAALQEQGRQKLESSIREGQKEVRQLIR----RLREGRA 645
Query: 632 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS--SFTPQFGEQVHVKSLGDKLATVV 689
D ESA A R D + + P+ GE++ + +LG K A V+
Sbjct: 646 D--------GESARRAGQRLRRIQADHRIQPQRKQHMGWRPEVGERIRLLALG-KAAEVI 696
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
+ D + V+ G MR V+ + + + K P+P + +SG
Sbjct: 697 AISEDGKQLTVRCGVMRSTVELSGVESLDGLK------PSPPELVVKVKVRSG------- 743
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEI 809
G V+T++N++D+RG+RV EA ++ L S ++VIHG+G+G +K + +
Sbjct: 744 -LGRGAEVRTTRNTVDVRGLRVHEAEVAVEEHLR--SSTGPIWVIHGIGSGKLKRGLRQW 800
Query: 810 LRNHPRVAKYE--QESPMNYGCTVAYI 834
L P V + + GC+V ++
Sbjct: 801 LETVPYVERVHDADQGDGGAGCSVIWL 827
>gi|72383421|ref|YP_292776.1| MutS 2 protein [Prochlorococcus marinus str. NATL2A]
gi|72003271|gb|AAZ59073.1| MutS 2 protein [Prochlorococcus marinus str. NATL2A]
Length = 804
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 260/838 (31%), Positives = 429/838 (51%), Gaps = 105/838 (12%)
Query: 15 KSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
++L SQ+LL+QT +L ++ + + D+ IL G + ++ V TL
Sbjct: 52 RNLSLSQELLSQTLEIGSLDSSLNEGISFDGVHDLENILLICSKGGIAIGEDLLKVADTL 111
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
RA + K + + Q P L ELLK+ L +L++ + F +D + I DRA
Sbjct: 112 RAARKLRKLIFD---------QVIRPRLSELLKDVATLPDLQKLLEFGLD-EGGRIADRA 161
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYL 189
S L +R R RN L K + I + G + +I++R R + KA
Sbjct: 162 SPKLSELR--RYRNSVRLQR--KDILQDIIRKYGGLLQDNIISERYGRPVLAFKAGTSDQ 217
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA-EETAILSLLTAEIAKSEREI 248
+ G+ + S+SG T ++EP+ + N ++ +SEI+ EE +L+ + E+ + I
Sbjct: 218 IK-GMVHDSSASGNTIYVEPQVVISIGNRLAKI-DSEISDEERRLLADWSKEVGLNAIVI 275
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+L++ +L+I+ A +RA +++W++GV IL + H F+ I+ +HPLL+
Sbjct: 276 AHLVEILLQIEFALSRARYSKWLNGVPAILDQEEHSPFE----IKDFRHPLLVW------ 325
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+D + TV VP V + +VV ITGPNTGGKT ++
Sbjct: 326 -----------NDFYEKKNTV-----------VPTSFDVAPDLKVVAITGPNTGGKTVAL 363
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH---ISRIVDI 425
K++GLA LM+KAGL LP PRLPW + ADIGD QSL+QNLSTFSGH ISRI+D
Sbjct: 364 KSIGLAVLMAKAGLLLPCTGSPRLPWCKNVFADIGDEQSLQQNLSTFSGHILRISRILDA 423
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+++ +LVL+DE+G+GTDP+EG ALA ++LQ + +R L + TTH+ L LK D+R
Sbjct: 424 IDVFPGTTLVLLDEVGAGTDPTEGTALAMALLQVMANRARLTIATTHFGQLKALKYSDSR 483
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
FENA+ F ET++PT+ + WG G SNA+ I+K +G D ++I AQK + PER +
Sbjct: 484 FENASVSFDSETIQPTFHLQWGIPGRSNAIEISKRLGLDEQVIISAQKFIN---PERVDN 540
Query: 546 RKSELYQSLMEERRKLESQARTAAS-------LHAEIMDLYREIEDEAKDLDRRAAHLKA 598
+++ Q L ++R + +S A AA+ LH E+++ +++ ++++ + +
Sbjct: 541 -VNQVIQGLEKQRERQQSAAEDAAALLAKTELLHEELLNSWQKQRQQSEEFNEQGRFKLE 599
Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
++ Q+E V+ +LRD +A + I + + I + +R D
Sbjct: 600 SSIREGQKE-----------VRHLIKRLRDQNASGETARI--AGQRLRQIEKGYRNDKRI 646
Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
+ +T S+TP+ GE+V + S+G K ++ D + V G R +V + +
Sbjct: 647 N----HTQSWTPKIGEKVRLSSIG-KAGEIISFSDDGMQLTVLCGVFRSKVNLTEVESLD 701
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
K E QS +S + V+T KN+LD+RG+RV EA +
Sbjct: 702 GQK--------------VEINQSVQVKTSQVRKNLS-LVRTKKNTLDVRGLRVHEAEGVI 746
Query: 779 DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY--GCTVAYI 834
+ L L+VIHG+G+G +K+ + + + P + K P + GC+V ++
Sbjct: 747 EEKLR--NCSGALWVIHGIGSGKLKKGLRKWFDSLPYIEKVADAEPHDGGPGCSVVWM 802
>gi|428218654|ref|YP_007103119.1| MutS2 family protein [Pseudanabaena sp. PCC 7367]
gi|427990436|gb|AFY70691.1| MutS2 family protein [Pseudanabaena sp. PCC 7367]
Length = 750
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 235/714 (32%), Positives = 375/714 (52%), Gaps = 62/714 (8%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L + I+DI L +L ++ V TL N+ +++ + A+ D + LQ +
Sbjct: 64 LTMEGIQDITVPLKRVEKNGMLYAEQLWQVATTLAGARNL-RRIIDNAD-DCEYLQAF-- 119
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
+ ELE+ I CID + +LDRASE L +RA ++ + + +L+ +
Sbjct: 120 ----VSELRTYPELEQDIYRCID-ESGTVLDRASEKLGQLRASSRQVRDRIYGILQNIMQ 174
Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ ++ + + +IT+R R + +KA K +P G+ + SS+G T F+EP V NN
Sbjct: 175 R--KSAALQENIITQRSDRYVLSVKAPQKDKIP-GVVHDASSTGMTVFVEPHAIVTANNQ 231
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
+L+ E AE IL L+ ++A+ ++ L+ V EIDLA ARA +A W+ P
Sbjct: 232 LRQLAKQEQAEIEIILRQLSGQVAEVGEDLWRLLAIVTEIDLAIARARYALWLGANAPTF 291
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSS-----LRSLSAASSNS------------------ 315
+ + D++ +IE + SS L+S S NS
Sbjct: 292 I--NFAAPDAATDIESNQKESASQSSDVDQLLQSESDDPGNSQLVEPGDRPATSSLLKKP 349
Query: 316 -NPLKSDVENSEMTVGSLSKGISDFP---------VPIDIKVECETRVVVITGPNTGGKT 365
+ + +D+ +++T+ L + + VP+D+ + E VVVITGPNTGGKT
Sbjct: 350 ASKINADLPPAQLTLRGLKHPLLVWQQQHEQGREVVPVDVLIAPEISVVVITGPNTGGKT 409
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
A++KT GLA+LM+K+G+++PA+ LPWFDL+LADIGD QSL+QNLSTFSGHI RI I
Sbjct: 410 ATLKTFGLAALMAKSGMFVPAREPVELPWFDLVLADIGDEQSLQQNLSTFSGHIKRIGRI 469
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L + ESL+L+DE+G+GTDP+EG A+A ++L+YL L V TTH+ +L LK
Sbjct: 470 LTAATAESLILLDEVGAGTDPTEGSAIAKALLEYLATHACLTVATTHFGELKTLKYNHAC 529
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
FENAA EF L PTYR+ WG G SNAL IA +GF +I+++AQ V E
Sbjct: 530 FENAAVEFDDVKLAPTYRLQWGIPGRSNALAIAARLGFPAEILEQAQDHVGFGSAEL--- 586
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
+ + L +RRK E + + A+ L A+ LY EI +A L L+ + +V
Sbjct: 587 --NTVIADLEGQRRKHEDKLKQASKLLAQTEHLYVEISKKAAKLKESERELRQNQEIEVT 644
Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
+ + AK +I V++ +L+ + E + +E + + + H P +
Sbjct: 645 EAIKQAKKEIARVIR----KLQKGDSPEA---VHFAERRVQELSKRHLPSQQPQPKTQSQ 697
Query: 666 SS--FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
+ + P+ G++V V LG ++ V+ P + D + V+ G+M++ V +I +
Sbjct: 698 AQQKYVPKVGDRVRVPKLG-QVVQVLSEPTNADELSVRLGQMKMTVALRDIEKV 750
>gi|88807280|ref|ZP_01122792.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
WH 7805]
gi|88788494|gb|EAR19649.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
WH 7805]
Length = 794
Score = 327 bits (839), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 260/835 (31%), Positives = 419/835 (50%), Gaps = 96/835 (11%)
Query: 16 SLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
SL++S L QT +L + L + D+A L G S E+ V TL
Sbjct: 41 SLQDSLALQAQTLEMGSLDGVLEGGLSFQGVSDLARTLLRCSKGGTASGEELLDVANTLA 100
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
A + +++ E P+ LL++ +LE+++ F I+ + + DRAS
Sbjct: 101 AARRLRRQIDEP---------ELRPVCTTLLRDVATFPDLEQRLKFAIE-EGGRVADRAS 150
Query: 133 EDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L+ +R + R R + L ++++ AA + +I +R R + +KA
Sbjct: 151 PGLDGLRRQWQELRARRRDRLQDVIRRWAAHL------QDTVIAERHGRPVLAVKAGAGG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
P G+ + S+SG+T F+EPK ++ N + EE +LS L+A +A+ +
Sbjct: 205 QCP-GMVHDSSASGSTMFVEPKSVIDLGNKLADVDGRIREEEQRVLSELSAAVAEQVEGL 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++LM +L++DLA AR + QW+ V P L S + D+ + ++HPLL+
Sbjct: 264 QHLMQVLLKLDLALARGRYGQWLGAVPPRLES----AVDAPFELRTLRHPLLVWQE---- 315
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ P V + RVV ITGPNTGGKT ++
Sbjct: 316 ---RNEQGPTVVPVSVEVSSS---------------------LRVVAITGPNTGGKTVTL 351
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
K++GLA+LM++AGL++P P LPW +LADIGD QSL+Q+LSTFSGH+ RI ILE
Sbjct: 352 KSIGLAALMARAGLWVPCSGSPTLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGRILEA 411
Query: 429 VSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
+ +LVL+DE+G+GTDPSEG ALAT++L+ L DR L V TTH+ +L LK D R
Sbjct: 412 IRSGPAPALVLLDEVGAGTDPSEGTALATALLRTLADRARLTVATTHFGELKALKYSDAR 471
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
FENA+ F ETL PTY +LWG G SNAL IA +G + +I A+ L+ +
Sbjct: 472 FENASVAFDSETLSPTYHLLWGIPGRSNALAIATRLGLEGSVIDEARALLAPV----GDG 527
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
+ + + L E+R + ++ A AA+L A L+ E+ + + +A + + Q+++
Sbjct: 528 EVNTVIRGLEEQRMRQQAAAEDAAALLARTELLHEELLQRWEKQKQHSAERQEQGRQRLE 587
Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD--DFSVSET 663
+ + ++ +++ +LRD AD E+A A + +D
Sbjct: 588 TSIRAGQKEVRQLIR----RLRDDGAD--------GETARQAGQRLRKLEDRHRPEPERR 635
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
+ PQ G+++ + +LG K A V++V D + V+ G MR V+ + + + K
Sbjct: 636 RHQGWRPQVGDRIRLLALG-KAAEVLKVSDDGLQLQVRCGVMRSTVELSAVESLDGRKPD 694
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALA 783
A P ++R + R SGSA V+TS+N++D+RGMRV EA ++ L
Sbjct: 695 PPAAPVVQVRVKAR-RGSGSA-----------EVRTSRNTVDVRGMRVHEAESTVEEVLR 742
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHP---RVAKYEQESPMNYGCTVAYIK 835
+ ++VIHG+GTG +K + + ++ P RV EQ GC+V +++
Sbjct: 743 G--ASGPVWVIHGIGTGRLKRGLRDWFQSLPYVERVVDAEQ-GDGGAGCSVVWVR 794
>gi|113953514|ref|YP_731592.1| MutS2 family protein [Synechococcus sp. CC9311]
gi|113880865|gb|ABI45823.1| MutS2 family protein [Synechococcus sp. CC9311]
Length = 805
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 250/807 (30%), Positives = 417/807 (51%), Gaps = 90/807 (11%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L + D+ +L G S E+ +V TL A + +++ D D R S
Sbjct: 79 LSFQGVYDLEMVLLRCYKGGTASGEELLSVAHTLAAARRLRRQID-----DPDLRPRCSA 133
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
LLE N L ELE+++ F ++ + + +RASE LE +R + R+ + L ++++
Sbjct: 134 LLE---NVATLPELEQRLKFALE-EGGRVANRASESLEDLRLQWQVARQERRDRLQAVVR 189
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ + + +I +R R + +KA P G+ + SSSG T F+EPK +
Sbjct: 190 RWSTLL------QDTVIAERHGRPVLAVKAGAASQCP-GMVHDSSSSGNTVFVEPKTVIG 242
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
N L EE +L+ L+A +A+ I LM +L++DLA AR + QW+ V
Sbjct: 243 LGNRLAALDGRIRDEERRVLAELSAAVAEQNDVIDRLMAVLLKLDLALARGRYGQWLGAV 302
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P L +++ DS +I ++HPLL+ + A +
Sbjct: 303 PPRLEAEA----DSPFHILELRHPLLVWQQRKEGGAPVVPVS------------------ 340
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
++V + RVV ITGPNTGGKT ++K++GLA+LM++AG+++P P LPW
Sbjct: 341 ----------VEVSEQLRVVAITGPNTGGKTVTLKSIGLAALMARAGMWIPCNGSPSLPW 390
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVA 451
+LADIGD QSL+Q+LSTFSGH+ RI IL+ ++ +LVL+DE+G+GTDPSEG A
Sbjct: 391 CAQVLADIGDEQSLQQSLSTFSGHVKRIGSILQSIASGPAPALVLLDEVGAGTDPSEGTA 450
Query: 452 LATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGD 511
LA ++L+ L + L + TTH+ +L LK D+RFENA+ F ++L PTY++LWG G
Sbjct: 451 LAIALLRNLANCARLTIATTHFGELKALKYSDSRFENASVSFDSDSLSPTYQLLWGIPGR 510
Query: 512 SNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
SNAL IA +GFD +I++A++L L+P + + + L E+R++ ++ A AA+L
Sbjct: 511 SNALAIATRLGFDSGVIEQARQL---LKPSGDGDVNA-VIRGLEEQRQRQQAAAEDAAAL 566
Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
A L+ E+ + + +A + Q+++ + + ++ +++ +LRD A
Sbjct: 567 LARTELLHEELLQRWEQQRKNSAQQQELGRQRLESSIRDGQKEVRHLIR----RLRDQKA 622
Query: 632 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNT-SSFTPQFGEQVHVKSLGDKLATVVE 690
D + + + + HR SV E + P GE++ + +L DK A V+E
Sbjct: 623 D--GETARSAGQRLRKLESKHR-----SVPERRLHPEWRPSVGERIRLLAL-DKAAEVLE 674
Query: 691 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 750
V D + V+ G MR V ++ + + AA P + + + R SG
Sbjct: 675 VSDDGQQLSVRCGVMRSMVDLQSVESLDG---RRAAPPEKPVVQVKARRGSG-------- 723
Query: 751 ASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL 810
G +V+T++N++D+RG RV EA ++ L + ++VIHG+GTG +K + + L
Sbjct: 724 ---GSQVRTARNTVDVRGQRVHEAEAAVEELLRG--ANGPIWVIHGIGTGRLKRGLRQWL 778
Query: 811 RNHPRVAKY--EQESPMNYGCTVAYIK 835
+ P V + + GC+V +++
Sbjct: 779 DSLPYVERVGDADQGDGGPGCSVVWVR 805
>gi|159463342|ref|XP_001689901.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283889|gb|EDP09639.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1007
Score = 325 bits (834), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 261/787 (33%), Positives = 386/787 (49%), Gaps = 121/787 (15%)
Query: 5 VVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSE 64
+V +P G+S E+S+ LL QT AL L++ + DI +A G L+ +
Sbjct: 100 LVAGGGLPRGRSREDSELLLQQTQEAL----EAGLEVGGLFDIRPAAEAAAGGVCLTGKQ 155
Query: 65 ICAVRRTLRAVNNVWKKLTEAAELDGDSLQ----RYSPLLELLKN-CNFLTELEEKIGFC 119
+ V TL A + +++T A+ Q RY L L + + L I C
Sbjct: 156 LEGVASTLEAAFELKERVTVPAQGPQQQQQQGGLRYPSLAALAASITDEERTLLRAIRGC 215
Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
I + + D ASE L +RAER+ N E L + ++ A Q+ Q G + ++ R R C
Sbjct: 216 I--QYGGVSDAASEALAAVRAERQANKERLRAEVEGWARQLQQKGAAEAGAVSLIRGRFC 273
Query: 180 VGIKASHKYLLPDG-IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
+G++A + LP G + L SS+GAT ++EPK AVE NN E L+ E E +LS+L+
Sbjct: 274 IGVRAGRQGELPKGSVRLGQSSTGATLYLEPKPAVELNNAEALLAEREEGEVVRVLSMLS 333
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
+AK ++ L+D V +D+ ARA A+W+ GV P ++ +S + G HP
Sbjct: 334 TLLAKRAPQLMRLVDCVTALDVVAARAKHARWLSGVRPAFTADPS---ESPFWVPGALHP 390
Query: 299 LLLGSSLRSLSAASS-NSNPLKSDVENSE-------MTVGSLSKG-ISD----------- 338
+L+ L L S + N D + + +T G ++D
Sbjct: 391 VLMQRGLPPLPQPPSVDDNRFDRDFQAAPAWELRRVLTPDGPRPGELADGSAAGRGSGGG 450
Query: 339 --------FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA---- 386
P P+D++V VV ITGPNTGGKT ++KT GL +LM++AGL+LP
Sbjct: 451 AVDDRAALLPRPLDLRVPSSRAVVAITGPNTGGKTVTLKTAGLMTLMAQAGLFLPCDPTA 510
Query: 387 --------KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
PRL WFD +LADIGD QSL+QNLSTFSGHI RI IL + SLVL+D
Sbjct: 511 RAEAAAAAAGTPRLAWFDRVLADIGDAQSLQQNLSTFSGHIRRIKQILAVAGPRSLVLLD 570
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+GSGTDP EG ALA ++L L ++ L + TTH+A+L ++D R+ N + F TL
Sbjct: 571 EVGSGTDPLEGAALARAVLDRLAEQAHLTLATTHHAELKRASEEDGRYVNVSMAFDTATL 630
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDR--------------------------------- 525
RPTYR+ WG+ G SNAL+IA+++GFDR
Sbjct: 631 RPTYRLCWGAAGASNALDIAETLGFDRWRCGCRAVVLEARKMAAMMAASASAAAATAEGG 690
Query: 526 --------KIIQRAQKLVERLRPERQQHR---KSELYQSLMEERRKLESQARTAASLHAE 574
I A+ LV+++ RQ R ++ Q L +R E +R A+L +E
Sbjct: 691 SSGEGRESHIAGVARSLVQQIEDTRQDSRYCITNDALQELEGQRALRERHSRNQATL-SE 749
Query: 575 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE--NQLRDASAD 632
+ RE+E AA L+A ++ +E + V++ ++ F +Q +DA
Sbjct: 750 ALVQVRELE---------AALLEAP--PEIVRERDGHAVRVQAALEAFAAGSQPQDA--- 795
Query: 633 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL-ATVVEV 691
+ ++E ES I A V A R + + + P G+ V+V+S GD A VV V
Sbjct: 796 -VEEQLREIESLIPAEVAALR-GRGYVGDDDDEELLRP--GDSVYVRSRGDMGDARVVSV 851
Query: 692 PGDDDTV 698
GD TV
Sbjct: 852 KGDMVTV 858
>gi|87125334|ref|ZP_01081180.1| MutS 2 protein [Synechococcus sp. RS9917]
gi|86167103|gb|EAQ68364.1| MutS 2 protein [Synechococcus sp. RS9917]
Length = 798
Score = 325 bits (833), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 251/842 (29%), Positives = 414/842 (49%), Gaps = 105/842 (12%)
Query: 12 PFGKSLEESQKLLNQTS--AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
P L ES++ L ++ A L + L + D+ +L G + AV
Sbjct: 44 PLPSDLRESRERLARSIELAGLDGVVDGGLSFQGVHDLEPVLLRCCKGGTADGEALLAVA 103
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
TL A + +++ D + LLK+ L +LE+++ F ++ + + D
Sbjct: 104 DTLAAARRLRRQI--------DDPELRPRCTALLKDVATLPDLEQRLKFSLE-EGGRVAD 154
Query: 130 RASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
RAS L +R + R++ + L ++++ A+Q+ +I +R R + +KA
Sbjct: 155 RASAVLAGLRGQWQTVRQQRRDRLQEVIRRWASQL------QDTVIAERHGRPVLAVKAG 208
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
P G+ + S+SG+T F+EP+ V+ N L EE +L+ L+A +A
Sbjct: 209 AVAQCP-GMVHDSSASGSTVFVEPRQVVDLGNRLADLEGRIREEEQRVLAELSAAVAAEG 267
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ L +L +DL+ RA + QW+ V P L + ++ + + ++HPLL+
Sbjct: 268 EALTRLGAVLLVLDLSLTRARYGQWLGAVPPQLEADP----EAPLVLHDLRHPLLVWQER 323
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
R+ A VPI ++V RVV ITGPNTGGKT
Sbjct: 324 RAGGGAV----------------------------VPISVEVSSHLRVVAITGPNTGGKT 355
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++K++GLA+LM++AGL+LP P LPW +LADIGD QSL+Q+LSTFSGH+ RI I
Sbjct: 356 VTLKSIGLAALMARAGLWLPCSGRPSLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGRI 415
Query: 426 LELV---SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
LE + + +LVL+DE+G+GTDPSEG ALAT++L+ L DR L + TTH+ +L LK
Sbjct: 416 LEALHSGAAPALVLLDEVGAGTDPSEGTALATALLRSLADRARLTIATTHFGELKALKYS 475
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
D RFENA+ F +TL PTYR+LWG G SNAL IA +G D +I +AQ+L L P R
Sbjct: 476 DPRFENASVAFDSDTLSPTYRLLWGIPGRSNALAIATRLGLDADVIAQAQEL---LAP-R 531
Query: 543 QQHRKSELYQSLMEERRKLESQARTAAS-------LHAEIMDLYREIEDEAKDLDRRAAH 595
+ + + + L ++R++ ++ A AA+ LH E++ + E+
Sbjct: 532 AEGDVNAVIRGLEDQRQRQQAAAEDAAALLARTELLHEELLARWERQRQES--------- 582
Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
++ +Q +Q L + V+ +LRD AD +++ + + H+P
Sbjct: 583 --SQRQEQGRQRLETSIRDGQKEVRRLIRRLRDGKAD--GETARQAGQRLRRLEADHKPR 638
Query: 656 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
+ + P+ GE++ + SLG K A V+ + D + V+ G +R V +
Sbjct: 639 PE----RREHRDWRPEVGERIRLLSLG-KAAEVLAISDDGCQLSVRCGVLRSTVDLAAVE 693
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
+ + + ++G G+ +V+TS+N++D+RGMRV EA
Sbjct: 694 SLDGRRPAPPPP------VVKVKARAGGGGA---------QVRTSRNTVDVRGMRVHEAE 738
Query: 776 HQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY--EQESPMNYGCTVAY 833
++ L + ++VIHG+G+G +K + L P V K ++ GC+V +
Sbjct: 739 SAVEEVLR--SASGPVWVIHGVGSGRLKRGLRAWLGTVPYVEKVCDAEQGDGGAGCSVVW 796
Query: 834 IK 835
+
Sbjct: 797 PR 798
>gi|116073767|ref|ZP_01471029.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
RS9916]
gi|116069072|gb|EAU74824.1| putative DNA mismatch repair protein MutS family [Synechococcus sp.
RS9916]
Length = 804
Score = 324 bits (830), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 262/834 (31%), Positives = 428/834 (51%), Gaps = 98/834 (11%)
Query: 17 LEESQKLLNQTS--AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE S++ L ++ A L + L + D+ +L G + E+ V TL A
Sbjct: 54 LEASRQWLARSIELAGLDGVTEGGLSFQGVHDLDAVLKRCSKGGVADGEELLEVADTLAA 113
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
+ +++ +D D PL EL ELE+++ F ++ + + DRAS
Sbjct: 114 ARRLRRQI-----VDPD----LRPLCTELFNAVATFPELEQRLKFSLE-EGGRVADRASA 163
Query: 134 DLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L +R + R++ + L ++++ +AQ+ +I +R R + +KA
Sbjct: 164 ALAGLRLQWQSLRQQRRDRLQDVMRRWSAQL------QDTVIAERHGRPVLAVKAGAVGH 217
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE---IAEETAILSLLTAEIAKSER 246
G+ + S+SG T F+EP+ +E N RL+ E EE +L+ L+ + +
Sbjct: 218 C-KGMVHDSSASGNTVFVEPQAVIELGN---RLAAQEGRIREEEQRVLAELSTAVGEQHD 273
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ L + +L +DL ARA + QW+ GV P L + D+ +E ++HPLL+ R
Sbjct: 274 PLTKLGEVLLLLDLTLARARYGQWLGGVPPRLEADP----DAPFALEQLRHPLLVWQQKR 329
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
A DV VPI I V + RVV ITGPNTGGKT
Sbjct: 330 EYGA----------DV------------------VPISITVAGDLRVVAITGPNTGGKTV 361
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++K++GLA+LM++AGL+LP + P LPW L+LADIGD QSL+Q+LSTFSGH+ RI IL
Sbjct: 362 TLKSIGLAALMARAGLWLPCQGTPSLPWCALVLADIGDEQSLQQSLSTFSGHVKRIGRIL 421
Query: 427 ELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
+ + +LVL+DE+G+GTDPSEG ALAT++L+ L DR L + TTH+ +L LK D
Sbjct: 422 AALDQGATPALVLLDEVGAGTDPSEGTALATALLRSLADRARLTIATTHFGELKALKYSD 481
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
+RFENA+ F ETL PTY++LWG G SNAL IA +G D ++I++A+ L L P+
Sbjct: 482 SRFENASVAFDSETLSPTYQLLWGIPGRSNALAIATRLGLDPQVIEQARGL---LSPQAD 538
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
+ + + L E+R++ ++ A AA+L A L+ E+ + ++++ + + Q+
Sbjct: 539 GDVNA-VIRGLEEQRQRQQAAAEDAAALLARTELLHEELLGRWERQRQQSSLQQEQGRQR 597
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
++ + + ++ +++ +LRD AD +++ + + HRP +
Sbjct: 598 LETSIRDGQKEVRRLIR----RLRDQKAD--GETARKAGQRLRRLEADHRP----APERR 647
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
+ PQ G+++ + +LG K A V+ + D + V+ G MR V+ + + + K
Sbjct: 648 RHPDWRPQVGDRIRLLALG-KAAEVLSISDDGLQLTVRCGVMRSTVELSAVESLDGRK-- 704
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALA 783
P P+ Q + R G G+ V+TS N++D+RGMRV EA ++ L
Sbjct: 705 --PTP-PQATVQVKARGVGGRGAD---------VRTSSNTVDVRGMRVHEAESAVEERLR 752
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+ L+VIHG+GTG +K + + L P V + + GC+V Y +
Sbjct: 753 T--ATGPLWVIHGIGTGKLKRGLRQWLETVPYVERVSDADQGDGGPGCSVIYPR 804
>gi|33239697|ref|NP_874639.1| mismatch repair ATPase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
gi|33237222|gb|AAP99291.1| Mismatch repair ATPase (MutS family) [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 805
Score = 322 bits (826), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 245/803 (30%), Positives = 403/803 (50%), Gaps = 104/803 (12%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNF 108
IL + G +LS E+ +V TL+A + +++ D L R P++ LL +
Sbjct: 90 ILLRSSKGGVLSGLELLSVAETLKAARRLRRQIY-------DPLSR--PIISSLLSDLAT 140
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAG 164
L EL+ I F ++ + + DRASE L +R + R + L L++K +
Sbjct: 141 LPELQRLIEFGLE-EGGRVADRASEKLSELRRQVYILRIERRDLLKDLIRKCNS------ 193
Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
+ +I +R +R + +K+ L I N S+SG T F+EPK + N
Sbjct: 194 FLQDTVIAERYNRPVLALKSGAIDQLLGTIHDN-SASGNTVFLEPKAVIPLGNRIEEFEA 252
Query: 225 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 284
+ EE +L+ + E+ + + ++ L +L ++ A ARA ++ W+ GV P + +
Sbjct: 253 KILVEEQRLLAYWSEEVGTNFQVLESLSQILLRLEFALARARYSNWLGGVAPQIRDEE-- 310
Query: 285 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 344
D+ I+ +HPLL+ E+ E D +PI
Sbjct: 311 --DAPFIIQEFRHPLLIWQ-------------------EHYEQ---------GDVVIPIS 340
Query: 345 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 404
+V + RVV ITGPNTGGKT ++K++GLA LM+K GL+LP P LPW + +LADIGD
Sbjct: 341 FEVSSDLRVVAITGPNTGGKTVTLKSIGLAILMTKLGLFLPCVGEPSLPWCNQVLADIGD 400
Query: 405 HQSLEQNLSTFSGHISRIVDILELV---SRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
QSL+QNLSTFSGH+ RI+ IL+ + S S++L+DE+G+GTDP+EG ALA ++L+
Sbjct: 401 EQSLQQNLSTFSGHVVRIIRILDAIAIRSGPSIILLDELGAGTDPTEGTALAIALLKTFA 460
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
DR L + TTH+ +L LK D+RFENA+ F ET+RPTY + WG G SNAL IA+ +
Sbjct: 461 DRARLTIATTHFGELKALKYHDSRFENASVGFDSETIRPTYHLQWGIPGKSNALAIARRL 520
Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS-------LHAE 574
G D + RAQ L+ +++ Q L E+R++ + A AA+ LH E
Sbjct: 521 GLDHLVANRAQDLI----GSNGVDNVNQVIQGLEEQRQRQQDAAEEAAALLARTEMLHDE 576
Query: 575 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+M + + +++D R ++EL + + V++ +LRD SAD
Sbjct: 577 LMSRWHKQCQQSEDFQERG-----------RKELEISIREGQVEVRELIRRLRDRSAD-- 623
Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
+ +++ + I HR F N +++P+ G++V + S+G K V+ V D
Sbjct: 624 GEIARKTGQRLRRIENIHRQQKSFK----NERAWSPKAGDRVRLISIG-KAGEVISVSAD 678
Query: 695 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 754
+ V G R V + + + + ++ N + ++ + S
Sbjct: 679 GRQLTVMCGLFRSIVDLHAVESL-DGQKPNLPDSVVNIK-------------TTTPLSNS 724
Query: 755 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
++T +N++D+RG+RV EA ++ L L+V+HG+GTG +K+ + E L N
Sbjct: 725 ANIRTKRNTVDVRGLRVHEAESVIEEKLR--NMVGPLWVVHGIGTGRLKKGLTEWLDNLD 782
Query: 815 RVAKYEQESPMN--YGCTVAYIK 835
V K ++ GC++ ++K
Sbjct: 783 YVEKITTAEQVDGGAGCSIIWLK 805
>gi|334118052|ref|ZP_08492142.1| MutS2 protein [Microcoleus vaginatus FGP-2]
gi|333460037|gb|EGK88647.1| MutS2 protein [Microcoleus vaginatus FGP-2]
Length = 909
Score = 322 bits (825), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 272/901 (30%), Positives = 421/901 (46%), Gaps = 113/901 (12%)
Query: 11 IPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
+P + ++ +LL QT A L L I+DI L A LLS E+ A+
Sbjct: 44 LPIPATQAQTAELLAQTHEAYQLESRAGGALSFEGIQDIGTSLQRAELQGLLSGEELLAI 103
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
TL + + + DS L EL ELE++I CID + +
Sbjct: 104 ATTLAGARQLRRII--------DSQADVPTLKELAAQLRTYPELEQEIHRCIDDRAQVA- 154
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
DRA+ L IR + ++ + + +L+ + + Q+ + + LIT+R R + +KA K
Sbjct: 155 DRATPKLAGIRVQMRQLRDRIYQILQGILQR--QSNAVQEQLITQRSGRFVIPVKAPQKD 212
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P GI + S+SGAT ++EP V NN + E AEE A+ LT ++A + ++
Sbjct: 213 AIP-GIVHDSSASGATLYVEPHSTVNLNNQMRQFLRQEQAEEEAVRRALTEQVAAVKPDL 271
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDG------------VCPILSSQSHVSFDSSINIEGIK 296
L+ V +DLA A+A ++ W+ + P + + + E +
Sbjct: 272 DRLVVVVTTLDLAAAKARYSFWLQANPPKFIELGEPELAPKNPEKEDEEKEEKEDEEKEE 331
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV-PIDIKVECETRVVV 355
+ LL +LRS +PL + E FPV P+D+ + RVV
Sbjct: 332 NSQLLIRNLRSQITLRQLRHPLLVWQQQHE----------QGFPVVPVDLTIGPHIRVVA 381
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KTLGLA+LM+KAG+++ A+ LPWFD ILADIGD QSL+Q+LSTF
Sbjct: 382 ITGPNTGGKTVTLKTLGLAALMAKAGMFVAAREPVELPWFDNILADIGDEQSLQQSLSTF 441
Query: 416 SGHISRIVDILELVSRESLVLIDE----------------------------------IG 441
SGHI RI ILE++ +S +E I
Sbjct: 442 SGHIRRISRILEVLGNKSQAEGEETSNLPITNSQQQDQEVTDTQNTVSALPILKPKLQIP 501
Query: 442 SGTDPSEGVALATSILQYLRDRVG----------LAVVTTHY--------------ADLS 477
P LA L D VG LA+ Y +L
Sbjct: 502 KAQSPISNSQLAIPKSLVLLDEVGAGTDPSEGSALAIALLQYLAQHSLLTVATTHFGELK 561
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
LK +D+RFENA+ EF +++PTYR+LWG G SNAL IAK +G I++ AQ V
Sbjct: 562 ALKYQDSRFENASVEFDDNSMQPTYRLLWGIPGRSNALTIAKRLGLLASIVEEAQTYVGG 621
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
+ Q + L +RRK E++AR A L + L+RE+ +A L R LK
Sbjct: 622 ASQDVNQ-----VIAGLEAQRRKQETKAREATQLLHQTEKLHREVSQKAAALQERERELK 676
Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
+ V + + AK +I +++ + S ++ +++ + I E H P
Sbjct: 677 IAQEVAVNEAIGSAKSEIAQIIRRLQ------SGNQTAQNAQQATDTLNQISEKHLPSRQ 730
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
SF P+ G+++ + SLG + A V+ P ++ + V++G M++ VK I +
Sbjct: 731 QPAKP--KPSFMPKVGDRIRIPSLG-QTAEVLSGPDANEELSVRFGIMKMTVKLGEIESL 787
Query: 718 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR--VQTSKNSLDLRGMRVEEAS 775
K + A A + Q + + ++ E A P ++T+ N++DLRG RV +A
Sbjct: 788 DGQKPETKAQLAKAAAQAQALATAKAKQAAAEAAKPNPEIAIRTANNTIDLRGARVSDAE 847
Query: 776 HQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAY 833
++D AL+ VL++IHG GTG ++ V E L HP+V+++E S G TV Y
Sbjct: 848 IEIDRALSKAVEYGVLWIIHGKGTGQLRRGVHEFLATHPQVSRFELASQKEGGTGVTVVY 907
Query: 834 I 834
+
Sbjct: 908 L 908
>gi|357039259|ref|ZP_09101053.1| MutS2 protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355358158|gb|EHG05926.1| MutS2 protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 788
Score = 320 bits (819), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 245/793 (30%), Positives = 402/793 (50%), Gaps = 99/793 (12%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G LL P E+ V +TL A + +E DS Y+ L E+ +LE+ I
Sbjct: 81 GALLDPQELWHVLQTLTACRQIKNFFSERQ----DS---YTRLNEIAMGLGSFKDLEKMI 133
Query: 117 GFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
I +LDRASE L IR + ++R + L+ +++ + Q + + P++T
Sbjct: 134 ASAI-APGGEVLDRASERLFNIRRRLASAQQRIKDRLNEIIRSTSYQKY----LQDPIVT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEET 231
R R V +K ++ LP GI + S+SGAT F+EP VE NN EVR L E E T
Sbjct: 189 MREGRYVVPVKQEYRSQLP-GIVHDQSASGATLFIEPMPVVEANN-EVRGLMAEEKQEVT 246
Query: 232 AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL+ L+A + + E+ Y ++ + +D A+A +++ +D P +++ ++ ++
Sbjct: 247 RILTELSAAVGRQAEELLYALENLARLDFIMAKARYSESLDAWAPCIAT------EAKLD 300
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
I +HPLL P+K+ VPI I++
Sbjct: 301 IRQGRHPLL----------------PVKA--------------------VPISIQLGEAF 324
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
++VITGPNTGGKT S+KT+GL LM+ +GL++PA++ + FD + ADIGD QS+EQ+
Sbjct: 325 DMLVITGPNTGGKTVSLKTVGLLVLMAHSGLHVPAEDGTLIGMFDQVFADIGDEQSIEQS 384
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LSTFS H IV+IL+ +SLVL+DE+G+GTDP+EG ALA +IL LR + V TT
Sbjct: 385 LSTFSSHTINIVNILKKAGNKSLVLLDELGAGTDPTEGSALARAILDQLRQQGAKVVATT 444
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY +L + R ENA+ EF+ +TLRPTYR+L G G SNA IA +G + +IQRA
Sbjct: 445 HYGELKSYAFANERVENASVEFNSQTLRPTYRLLIGRPGRSNAFEIALRLGLNESVIQRA 504
Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE-AKDLD 590
+ + +Q + ++L + L R + E + A + E + YRE E A+ +
Sbjct: 505 RGFL-----TEEQVQVADLMRELENARVQAEQEQAEAEKIRRE-AEQYREQYMELAEKIR 558
Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI-- 648
+R + + ++ + A+++ + +V++ L++ + I + + +
Sbjct: 559 QRKDEIITRAVADSREMVKKARLEAEQLVEELRAALKEQTTHNREQSISNARQCLKQLQL 618
Query: 649 -VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
++A P + + ++ P G++V + G + V+E PG DD V VQ G +R+
Sbjct: 619 KIDAKAPQNAYEHPTEAVTNVKP--GDEVFIPKYGQR-GVVLEAPGQDDQVQVQVGMIRM 675
Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA-SYGPRVQTSKNSLDL 766
+ + +R + K A P R++G ++A PR LD+
Sbjct: 676 TIARQELR---RAATKETARP----------RRTGVGQLVQQKARDISPR-------LDM 715
Query: 767 RGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QE 822
RGMRV+E +++ L AC ++ ++HG GTG ++ V ++L+ H RV + ++
Sbjct: 716 RGMRVDEGLAEVEKYLDDACVAGLPLVQLVHGKGTGALRSAVQKLLKEHHRVKTFRLGEQ 775
Query: 823 SPMNYGCTVAYIK 835
G TV +K
Sbjct: 776 GEGGSGVTVVELK 788
>gi|452823864|gb|EME30871.1| DNA mismatch repair protein MutS2 [Galdieria sulphuraria]
Length = 902
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 250/802 (31%), Positives = 407/802 (50%), Gaps = 99/802 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQS--QPLDLSTIEDI-AGILNSAVSGQLLSPSEICAVRRTL 72
S E++Q+ L +T+ + M+S P D ++ I++ A G LL+P E+ + T
Sbjct: 142 SKEQTQQYLMETNECIRFMESGYSPTDWMVGANLLENIVDRAQKGSLLTPRELYQIVSTT 201
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
A++N WK+ ++ + Y L +++N + +LE+ I +D K I D AS
Sbjct: 202 LAISN-WKQSLQSQSTN------YPLLYRIVENVVSMKDLEDSICRSVDEKEQI-RDNAS 253
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
L R + + ++ +L + Q + +P+ T+R R + +KA+ + +P
Sbjct: 254 IRLYETRTQIRSTFVHIRKVLHSLLQQ--HEESLQEPIYTERFGRYVIPVKATRRNRVP- 310
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI ++SSSG+T ++EP N +L + E IL L+ ++ ++ + Y+
Sbjct: 311 GIIQDISSSGSTLYIEPNSIRSLTNRMQQLRHIEEEAIEEILFDLSRKVCENADHLLYIS 370
Query: 253 DRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSIN---IEGIKHPLLLGSSLRSL 308
+ ++D ARA F+Q ++G P I+ S S+ + ++ + G++HPLL +S+
Sbjct: 371 HAIFQLDWILARAQFSQQINGRFPTIVESFSNAALSCKVDAWKLRGVRHPLLERNSI--- 427
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
VPID +V V ITGPNTGGKT ++
Sbjct: 428 --------------------------------VPIDFEVRPGVTAVCITGPNTGGKTVAL 455
Query: 369 KTLGLASLMSKAGLYLPA-KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
KT G+ LM+K GL++P +N +P+F+ I AD+GDHQS+ Q+LSTFS HI RI I++
Sbjct: 456 KTFGIVILMTKVGLFVPCEQNDVHIPFFEDIFADVGDHQSVTQSLSTFSSHILRIQRIVQ 515
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
L + SLVL+DEIG+GTDP EG ALA S+L YL +RVG + TTH+ +L LK KD RFE
Sbjct: 516 LSHKRSLVLLDEIGTGTDPVEGCALAMSLLLYLVERVGFLMATTHHGELKTLKYKDARFE 575
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER------LRPE 541
NA+ E +LRPTYR++WG G S+A+ IA+ +G D I Q A+ +VE L E
Sbjct: 576 NASVELDTFSLRPTYRLIWGVAGRSSAIAIAQRLGLDNWITQSARSIVENGVDKLSLAIE 635
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
+ K Q ++E + ++E + R L ++M E E+ + L+ K
Sbjct: 636 DIERTK----QQVIEMKEQIERKERELECLERQLM----EREERIQQLENEWIETKK--- 684
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDAS-----ADEINSLIKESESAIAAIVEAHRPDD 656
Q ++Q+ A+ QI V+++ + DAS E+ SL+ E +SA +H
Sbjct: 685 QALEQDFANAREQIAKVIKEVQRCGSDASLIMERKQELESLMLEQKSA------SHHD-- 736
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
SVS T G+ V VK L + VVE + +V++G +RV+V
Sbjct: 737 --SVSGTKVRK-----GDWVLVKRLSSEPLQVVEGMNNKGDFMVRFGSIRVKVSIMEAEV 789
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ + + N + +K+ + S+ SS+ A + N++D+RG RVEEA+
Sbjct: 790 VNDPTIQKVENRSKLSKKRSTNSTLVSSTSSSIRAKW--------NTIDVRGCRVEEAAA 841
Query: 777 QLDIALACWESRSVLFVIHGMG 798
+++ L + F+IHG G
Sbjct: 842 KIENELGRNAECNQYFIIHGFG 863
>gi|148240433|ref|YP_001225820.1| mismatch repair ATPase [Synechococcus sp. WH 7803]
gi|147848972|emb|CAK24523.1| Mismatch repair ATPase (MutS family) [Synechococcus sp. WH 7803]
Length = 794
Score = 318 bits (815), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 256/838 (30%), Positives = 418/838 (49%), Gaps = 94/838 (11%)
Query: 12 PFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
P SL S L QT A+L + L + D+A L G S E+ V
Sbjct: 37 PLPDSLPASLTLQAQTLEMASLDGVLDGGLSFQGVRDLAPTLLRCSKGGTASGEELLEVA 96
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIIL 128
TL A + +++ E P+ LL++ +LE+++ F I+ + +
Sbjct: 97 DTLAAARRLRRQIDEP---------ELRPVCTTLLEDVATFPDLEQRLKFAIE-EGGRVA 146
Query: 129 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
DRAS L+ +R + R + + L ++++ AA + +I +R R + +KA
Sbjct: 147 DRASPGLDGLRRQWQELRAKRRDRLQDVIRRWAAHL------QDTVIAERHGRPVLAVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
P G+ + S+SG+T F+EPK ++ N + EE +L+ L+A +A+
Sbjct: 201 GAGGQCP-GMVHDSSASGSTVFVEPKVVIDLGNKLANVDGRIREEEQRVLAELSAAVAEQ 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+++LM +L++DLA AR + QW+ V P L S + D+ ++ ++HPLL+
Sbjct: 260 VEGLQHLMQVLLKLDLALARGRYGQWLGAVPPRLES----AVDAPFELKTLRHPLLVWQE 315
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+ P V + RVV ITGPNTGGK
Sbjct: 316 -------RNEQGPSVVPVSVEVSSS---------------------LRVVAITGPNTGGK 347
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++K++GLA+LM++AGL++P P LPW +LADIGD QSL+Q+LSTFSGH+ RI
Sbjct: 348 TVTLKSIGLAALMARAGLWVPCTGSPTLPWCAQVLADIGDEQSLQQSLSTFSGHVKRIGR 407
Query: 425 ILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
ILE + +LVL+DE+G+GTDPSEG ALAT++L+ L DR L V TTH+ +L LK
Sbjct: 408 ILEAIRSGPAPALVLLDEVGAGTDPSEGTALATALLRTLADRARLTVATTHFGELKALKY 467
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
D RFENA+ F +TL PTY +LWG G SNAL IA +G + +I A+ L L P
Sbjct: 468 SDARFENASVAFDSDTLSPTYHLLWGIPGRSNALAIATRLGLETSVIDDARAL---LSPA 524
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
+ + + L E+R + ++ A AA+L A L+ E+ + + +A + +
Sbjct: 525 GDGEVNT-VIRGLEEQRMRQQAAAEDAAALLARTELLHEELLQRWEKQKQHSAERQEQGR 583
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD--DFS 659
Q+++ + + ++ +++ +LRD AD E+A A + +D
Sbjct: 584 QRLETSIRAGQKEVRQLIR----RLRDDRAD--------GETARKAGQRLRKLEDRHRPE 631
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+ PQ G+++ + +LG K A V++V D + V+ G MR V+ + + +
Sbjct: 632 PERRRHQGWRPQVGDRIRLLALG-KAAEVLKVSADGLQLQVRCGVMRSTVELSGVESLDG 690
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
K A P +++ + R SGSA V+TS+N++D+RGMRV EA ++
Sbjct: 691 RKPDPPAAPVVQVQVKAR-RGSGSA-----------EVRTSRNTVDVRGMRVHEAESAVE 738
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY--EQESPMNYGCTVAYIK 835
L + ++VIHG+GTG +K + + ++ V + + GC+V +++
Sbjct: 739 EVLRG--ASGPVWVIHGIGTGRLKRGLRDWFQSLAYVERVVDADQGDGGAGCSVVWVR 794
>gi|51892253|ref|YP_074944.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
gi|81692142|sp|Q67QE3.1|MUTS2_SYMTH RecName: Full=MutS2 protein
gi|51855942|dbj|BAD40100.1| DNA mismatch repair protein [Symbiobacterium thermophilum IAM
14863]
Length = 793
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 252/816 (30%), Positives = 387/816 (47%), Gaps = 98/816 (12%)
Query: 19 ESQKLLNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E Q +TS A + + + L + D+ + AV G +L P ++ V T +
Sbjct: 42 EVQHRQAETSEARRLYEGGHAIPLGGLHDLRAHVQRAVRGGVLDPGDLLDVADTAASSRR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
+ + L E Q P+L L + LE +I +D + D + E
Sbjct: 102 LKRFLEE---------QEGLPILTALSRMLGTFHHLEAEIRQAVDEHGEVRDDASPALAE 152
Query: 137 LIRAER---KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
+ R+ R R E LD+ ++ AA+ Q P++T R R V +K ++ +P G
Sbjct: 153 IRRSMRILQNRMKERLDAFVRGSAAKYLQ-----DPIVTIREGRFVVPVKIEYRAQVP-G 206
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG+T F+EP VE NN L+ E E IL+ L++ +A + +
Sbjct: 207 IVHDQSASGSTLFIEPMAIVEMNNDLRELALKEHEEVERILARLSSLVAGEADALLDTLQ 266
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +ID A A+ + +D P L + + I +HPLL G
Sbjct: 267 AVAQIDFASAKGKLSLDLDCTEPELVREP------ILEIHKGRHPLLKGRV--------- 311
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
VPID+ + +VITGPNTGGKT ++KT+GL
Sbjct: 312 ---------------------------VPIDVHIGITFDTLVITGPNTGGKTVALKTMGL 344
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM++AGL+LPA + R+ F + DIGD QS+EQ+LSTFSGH++ I+ IL+ + +
Sbjct: 345 FVLMAQAGLHLPAGHGTRVGVFQQVFVDIGDEQSIEQSLSTFSGHMTNIIRILDALEGPA 404
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL+DE+G+GTDP+EG ALA SIL++L R V TTHY++L +R ENA+ EF
Sbjct: 405 LVLLDELGAGTDPTEGAALAMSILEHLHKRGAKTVATTHYSELKTYAYTRSRVENASVEF 464
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ETLRPT+R+L G G SNA I++ +G I+ RA++ + ++Q R +L Q
Sbjct: 465 DVETLRPTFRLLIGVPGSSNAFEISRRLGLSPHIVDRARQFL-----TQEQERVEDLIQG 519
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
+ R +LE + A L AE + E E D R+AA K Q QQ L A+
Sbjct: 520 IHATRAELEKERAEAHRLRAEAQRMREEYERRYGDAQRKAAETVEKARAQAQQILATARR 579
Query: 614 QIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS---SFTP 670
+ + V+ + + LR+ E I+ + S +A +A P ++ + P
Sbjct: 580 EAEAVIAELKQALREQREAERMQAIQSARSRLARARQAVEPTEEEQRARRRGEVPRGLKP 639
Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
G++V V SL D V+ P D VLVQ G +++ V +
Sbjct: 640 --GDKVRVVSL-DTTGYVLSEPDADGNVLVQAGILKMTVSLTD----------------- 679
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN-----SLDLRGMRVEEASHQLDIAL--A 783
L + E++ + AG ++G + SK +DLRG+ VEEA ++D L A
Sbjct: 680 -LERASEEQPAAGAGGPARMRTHGKGLAVSKAREMSPEVDLRGLMVEEALERVDKFLDDA 738
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ +IHG GTG +++ V E LR+ RV Y
Sbjct: 739 VLAGLPQVRIIHGKGTGALRKAVTEALRHDRRVESY 774
>gi|118444471|ref|YP_877846.1| recombination and DNA strand exchange inhibitor protein
[Clostridium novyi NT]
gi|229486371|sp|A0PZP4.1|MUTS2_CLONN RecName: Full=MutS2 protein
gi|118134927|gb|ABK61971.1| DNA mismatch repair MutS2 family protein [Clostridium novyi NT]
Length = 785
Score = 316 bits (810), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 263/834 (31%), Positives = 409/834 (49%), Gaps = 113/834 (13%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
P+ + E + L+ A ++ S + DI ++ A L PSE+ V
Sbjct: 36 PYESAYEVREHLMETEEAFKISIKKGDAPFSGLYDIREAISKAQRRFTLFPSELLRVANL 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
LRA + +K ++ +L ++Y L + + L LEE+I CI + I DRA
Sbjct: 96 LRA-SRRFKGYVKSDDLS----EKYEVLESITEGLVPLNGLEEEISKCIIGEEEIS-DRA 149
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYL 189
S L IR R++++ S +K + + + + + + T R R + +K HK
Sbjct: 150 STTLFNIR----RSLKDKTSSIKARVNSLIRTYSSHLQENIYTVRGERYVLPVKVEHKGA 205
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+P G+ + S+SGAT F+EP V+ NN L E AE IL+ L+ ++ ++ IK
Sbjct: 206 VP-GLVHDQSASGATLFIEPMSLVDLNNEIKELRLKEKAEIDRILAFLSGKVYENVDVIK 264
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
D + E+D FA+A +AQ + + PI+S H NI KHPL+
Sbjct: 265 VDADILWELDFIFAKAKYAQKLGAIMPIISEDGH------FNIINAKHPLI--------- 309
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+P K VEN+ L GI+ VVITGPNTGGKT ++K
Sbjct: 310 ------DP-KKVVENNIY----LRDGITS---------------VVITGPNTGGKTVTLK 343
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +M+ +GL + A + +F + ADIGD QS+EQ+LSTFS H++ IV+I++
Sbjct: 344 TVGLLHIMAMSGLMITASQGSTISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDSA 403
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K ENA
Sbjct: 404 DENSLVLFDELGAGTDPTEGAALAVSILENLRKRKTKVIATTHYSELKAYALKVDNVENA 463
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRK 547
+ EF +ETLRPTYR+L G G SNA I+K +G II+ A++ + E L+ E
Sbjct: 464 SVEFDVETLRPTYRLLIGVPGKSNAFEISKRLGLPDYIIEDAREGISEETLKFE------ 517
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDLDRRAAHLKAKETQQV 604
+L QSL + K + AR A S E + L + E D+ +D+ +A KE +++
Sbjct: 518 -DLIQSLQHKNIKAQEHARKAESAKEEAVKLKEKYESKLDKFQDIREKAILNAQKEAKEI 576
Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
+E AK + D +++D R + ++ L++E+ + D +E+
Sbjct: 577 IKE---AKEEADKILKDIRELERMGYSSDVRKLLEENRKKLK---------DKLEKTESK 624
Query: 665 TSSFTPQFGEQVHVKSLGDKL--------ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
+ + GE V S GD+L V+ P + V VQ G M+++V ++R
Sbjct: 625 LNQ-PKEVGEAVTNVSEGDELYLPKFETKVMVLTNPDNKGDVQVQAGIMKIKVNIKDLRK 683
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+K + K+Q ++ S +++ S+DLRGM EEA++
Sbjct: 684 TKETK----------IEKRQRKKKQMSLN-----------LKSVATSVDLRGMDSEEATY 722
Query: 777 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
D L AC S + +IHG GTGV++ + ++L+ HP V Y NYG
Sbjct: 723 TADKYLDDACMSGLSEVTIIHGKGTGVLRTAINDMLKRHPHVKSYRL---GNYG 773
>gi|159902779|ref|YP_001550123.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9211]
gi|159887955|gb|ABX08169.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9211]
Length = 805
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 253/815 (31%), Positives = 414/815 (50%), Gaps = 106/815 (13%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQR-YS 97
+ + ++ G++ G + S E+ ++ TLRAV + KK+ E D + R Y+
Sbjct: 79 ISFQGVNELDGVILHCSKGGIASGEELLSIAETLRAVRRL-KKIFE------DPVSRPYT 131
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
L + ELE+ + F I+ + + DRAS L +R R++++L + +
Sbjct: 132 T--SLFIDLATHHELEKVLLFGIE-EGGRVADRASNQLSQLR----RHLQDLRIGRRSIL 184
Query: 158 AQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
+ + G + +I +R R + +K +P G+ + SSSG T F+EP+ +
Sbjct: 185 QDLIRRNGSILQDTVIAERYGRPVIAMKVGSVDQVP-GVVHDSSSSGNTIFLEPQIVISL 243
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
N V + EE +LS+ + +AK+ + +L +L+++L ARA + W+ GV
Sbjct: 244 GNQIVEIQTKISKEEERLLSIWSQLVAKNINSLNHLSSVLLQLELGLARARYGDWLGGVL 303
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P+++++ D I+ HPLLL ++ P+ DV SKG
Sbjct: 304 PVITTKE----DDPFLIKDFSHPLLL---WKNKKLGGHKVIPITFDV----------SKG 346
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ +VV ITGPNTGGKT ++K+ GLA LM++ G+ LP + P LPW
Sbjct: 347 L---------------KVVAITGPNTGGKTIALKSFGLAVLMARCGMLLPCSSEPTLPWC 391
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVAL 452
+ +LADIGD QSLEQNLSTFSGHI+RIV IL+++++ ++VL+DE+G+GTDP+EG A+
Sbjct: 392 NQVLADIGDEQSLEQNLSTFSGHIARIVRILDVIAQSPGPTVVLLDEVGAGTDPTEGSAI 451
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A S+L+ L D L + TTH +L LK D+RFENA+ F ET+RPTY +LWG G S
Sbjct: 452 AISLLRALADSARLTIATTHLGELKALKYSDSRFENASVAFDSETIRPTYHLLWGIPGRS 511
Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 572
NA+ IA +G D +I + A+KL+ P+ Q +++ L E+R + + A AA+L
Sbjct: 512 NAVAIAIRLGLDSQITETAKKLIG---PKGLQD-VNQVILGLEEQRERQQKAAEDAAALL 567
Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV-----VQDFENQLR 627
A LY E+ A + +ET + QE+ K+ V++ +LR
Sbjct: 568 ARTELLYEEL---------LARWEQQQETNRKWQEVGRYKLGTSIREGQREVRNLIRRLR 618
Query: 628 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 687
AD + +++ + I RP VS N ++ P+ G++V + +LG K
Sbjct: 619 AEGAD--GDIARKAGQRLKQIEFDSRP----QVSRRNDFNWRPKIGDRVRLIALG-KSGE 671
Query: 688 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPI----PNSKRKNAANPAPRLRKQQEDRQSGS 743
++ + D + V G R V ++I + P+ + + PR +
Sbjct: 672 IISISEDGCHLTVLCGIFRSTVDLSSIESLDGRKPSIPKSSVKVTTPR-----------T 720
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVK 803
GS + V+T +N+LD+RG+RV EA ++ +L + ++VIHG+GTG +K
Sbjct: 721 MGSFST-------VRTDRNTLDVRGLRVHEAEAVVEESLR--NAIGKVWVIHGIGTGKLK 771
Query: 804 ERVLEILRNHP---RVAKYEQESPMNYGCTVAYIK 835
+ + L P RV EQ GC+V +++
Sbjct: 772 RGLRQWLETLPYVERVVDAEQNDG-GSGCSVIWLR 805
>gi|338814182|ref|ZP_08626216.1| MutS2 family protein [Acetonema longum DSM 6540]
gi|337273787|gb|EGO62390.1| MutS2 family protein [Acetonema longum DSM 6540]
Length = 786
Score = 311 bits (798), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 261/816 (31%), Positives = 393/816 (48%), Gaps = 97/816 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+EE Q L++T AL ++ S P + L I DI + A G +L E+ AV L A+
Sbjct: 40 MEEVQFRLSETREALGILCSVPNVPLGGIRDIREGIKRAAIGGILDTGELMAVGGVLYAI 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ + +L G L YS + ++N LE+ I I + I D AS +L
Sbjct: 100 RRMKSFFQDIPDL-GPILTDYSGGITPVRN------LEQAIENAISEQGQI-RDDASPEL 151
Query: 136 ELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
+R E R+R E +DS+L Q + L+T R R C+ +K H++ P
Sbjct: 152 SRLRREIRTTRQRIREKVDSILHSSEYQKY----FQDVLVTVRGDRYCIPVKQEHRHQFP 207
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + S+SGAT F+EP V+ NN + +E E IL+LL+ ++AKS +
Sbjct: 208 -GIIHDQSASGATVFIEPMAVVQLNNDLKQAMAAEKNEIERILTLLSLQVAKSASLLTQS 266
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ + ID AFA+A A + P+ + V + +HPL+
Sbjct: 267 CETMAHIDFAFAKARLALDLKAHEPLFNQTGQVELRQA------RHPLI----------- 309
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
P S+ VPID+++ + ++VITGPNTGGKT ++KT+
Sbjct: 310 -----P-------------------SEDVVPIDVRIGNDFHILVITGPNTGGKTVALKTV 345
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
G+ +LM++AGL++PA N +L F I ADIGD QS+EQ+LSTFS H++ +V IL V+
Sbjct: 346 GIFALMAQAGLFIPAANECQLTVFHNIFADIGDEQSIEQSLSTFSAHMTNLVRILNQVTG 405
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
+ LVL+DEIG GTDP EG ALA +IL+YL + TTHY++L + ENA
Sbjct: 406 KDLVLLDEIGIGTDPDEGAALAMAILEYLHSIGARTIATTHYSELKTFAYSRSGIENACV 465
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
EF +TLRPTYR+L G G SNA I+K +G KII RA++L+++ H + E
Sbjct: 466 EFDQQTLRPTYRLLIGVPGSSNAFQISKRLGLPVKIIDRARQLLDK------GHVEMESV 519
Query: 552 QSLMEERRKLESQARTAASLHA---EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
S +EE + S R A++ +I +L +++E E + L + A K + L
Sbjct: 520 LSSLEEEKT--SYIRRNAAIEQQERQITELRKKLELEQETLTEKKAETINKAKNEAAGIL 577
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDF-SVSETNTS 666
A+ + V+++ + Q + E I + + + +AH +D S+ +
Sbjct: 578 RQARRDAEEVIKELKEQFQVKDGQERQYAIHAARKRLRDNLSQAHHLEDQRESLPTVSAE 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G +V V +L TV+ V D VQ G M+V V + R +
Sbjct: 638 DLRP--GMKVWVVTLRQN-GTVISV--DSGEATVQLGIMKVNVALKDCRLAEGADE---- 688
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
PR R Q + + + QT +D+RG+ VEEA QLD L A
Sbjct: 689 ---PRERAPQSKKTVDTL-----------KTQTVSRQIDIRGITVEEAELQLDKYLDDAV 734
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
S VIHG GTG +++ V L+ H V E
Sbjct: 735 LSGLSEALVIHGKGTGALRKGVRSYLKQHRHVRSIE 770
>gi|333978122|ref|YP_004516067.1| MutS2 protein [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821603|gb|AEG14266.1| MutS2 protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 785
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 255/816 (31%), Positives = 391/816 (47%), Gaps = 113/816 (13%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L QT+ A +++ +P D DI L V G +L P E+ +TL A + K
Sbjct: 46 MLAQTTQARELLRLEPGADFGGWHDIRQYLQRVVRGAVLEPQELLETGQTLGACRRIRKF 105
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
AE G RY L E+ TELE+KI I I D AS L IR
Sbjct: 106 F---AERPG----RYPLLEEIALTIGNFTELEKKIARAI-LPGGEIADDASTALSTIRRR 157
Query: 142 RKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
+R E L+S+++ A Q + + P++T R R V +K ++ +P GI +
Sbjct: 158 LQRAQQQVKEQLESIVRSPAYQKY----LQDPIVTIREGRYVVPVKQEYRAQVP-GIVHD 212
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S+SGAT F+EP VE NN RL +E E IL L+ +A E+ ++ + +
Sbjct: 213 QSASGATLFIEPMAVVESNNEVRRLQVAEKQEIARILGELSGAVAARGEELALSLEALGQ 272
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+D ARA +++ +D V P L +N+ +HPLL GS
Sbjct: 273 LDFILARARYSEHLDAVEPRLLPAPR------LNLRQARHPLLSGSV------------- 313
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
VPI I V + +VITGPNTGGKT ++KT+GL +LM
Sbjct: 314 -----------------------VPISIHVGYQFDTLVITGPNTGGKTVTLKTVGLLALM 350
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
+++GL++PA L FD + ADIGD QS+EQ+LSTFS H++ IV IL V + SLVL+
Sbjct: 351 AQSGLHIPAGEGSELGVFDEVFADIGDEQSIEQSLSTFSSHLTNIVQILNQVGQGSLVLL 410
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DE+G+GTDP+EG ALA +IL+ L + V TTHY++L R ENA+ EF T
Sbjct: 411 DELGAGTDPAEGAALAQAILERLHEMGAKTVATTHYSELKNFAYARERVENASVEFDAIT 470
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 557
L+PTYR+L G G SNA IA+ +G +++RA+ + +Q + ++L Q L
Sbjct: 471 LKPTYRLLIGKPGSSNAFEIARRLGLAPDLVERARSFM-----TAEQVQVADLMQQLERA 525
Query: 558 RRKLESQARTAASLHAEIMDL---YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
R++ E + A + E L Y+ + DE L R + A+ ++ +Q + A+ +
Sbjct: 526 RQQAERELEEARRMRQEAEGLKERYQALRDE---LAARRESILARAREEARQLVKRARQE 582
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVE-----AHRPDDDFSVSETNTS--- 666
+ +++ +L D +A I+E+ +A + E A RP + V + S
Sbjct: 583 SEEAIRELRARLADEAARVREEAIREAREKLAVMQERLQVGAPRPKPEPGVIPESVSVGQ 642
Query: 667 -SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
F P+F ++ TVV +P + V VQ G +++ V
Sbjct: 643 TVFLPRFNQR----------GTVVALP-EAGEVQVQVGMIKINV---------------- 675
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--A 783
P LR ED S G + + ++ LDLRG+R EEA +++ L A
Sbjct: 676 --PLAELRLPAED--DTSRGEVRVASLVQDKTRSISTRLDLRGLRAEEALQEVEKYLDDA 731
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
S ++++HG GTG ++ + + L+ RV +
Sbjct: 732 TLAGLSRVYLVHGKGTGALRAAIQQQLKTDRRVKSF 767
>gi|168187371|ref|ZP_02622006.1| DNA mismatch repair MutS2 family protein [Clostridium botulinum C
str. Eklund]
gi|169294704|gb|EDS76837.1| DNA mismatch repair MutS2 family protein [Clostridium botulinum C
str. Eklund]
Length = 785
Score = 310 bits (793), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 261/834 (31%), Positives = 406/834 (48%), Gaps = 113/834 (13%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
P+ + E + L+ A ++ S + DI ++ A L PSE+ V
Sbjct: 36 PYESAYEVREHLMETEEAFKISIKKGDAPFSGLYDIREAISKAQRRFTLFPSELLRVANL 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
LRA + +K ++ +L+ ++Y L + + L LEE+I CI + I DRA
Sbjct: 96 LRA-SRRFKGYVKSDDLN----EKYEVLESITEGLVPLNGLEEEISKCIIGEEEIS-DRA 149
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQ--AGGIDKPLITKRRSRMCVGIKASHKYL 189
S L IR R++++ S +K + + + + + + T R R + +K HK
Sbjct: 150 SSTLFNIR----RSLKDKTSSIKARVNSLIRTYSSHLQENIYTVRGERYVLPVKVEHKGA 205
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+P G+ + SSSGAT F+EP V+ NN L E AE IL+ L+ ++ ++ IK
Sbjct: 206 VP-GLVHDQSSSGATLFIEPMSLVDLNNEIKELRLKEKAEIDRILAFLSGKVYENVDVIK 264
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
D + E+D FA+A +AQ + + PI+S H NI KHPL+
Sbjct: 265 VDADILWELDFIFAKAKYAQKLGAIMPIISEDGH------FNIINAKHPLI--------- 309
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+P K VEN+ L GI+ VVITGPNTGGKT ++K
Sbjct: 310 ------DP-KKVVENNIY----LRDGITS---------------VVITGPNTGGKTVTLK 343
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+G+ +M+ +GL + A + +F + ADIGD QS+EQ+LSTFS H++ IV+I+E
Sbjct: 344 TVGVLHIMAMSGLMITASQGSTISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIESA 403
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K ENA
Sbjct: 404 DENSLVLFDELGAGTDPTEGAALAVSILENLRKRKTKVIATTHYSELKAYALKVDNVENA 463
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRK 547
+ EF +ETLRPTYR+L G G SNA I+K +G II+ A++ + E L+ E
Sbjct: 464 SVEFDVETLRPTYRLLIGVPGKSNAFEISKRLGLPDYIIEDAREGISEETLKFE------ 517
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDLDRRAAHLKAKETQQV 604
+L QSL + K + AR A E + L + E D+ +D+ + KE +++
Sbjct: 518 -DLIQSLQHKNIKAQEHARKAEGAREEAVKLKEKYESKLDKFQDIREKGILNAQKEAKEI 576
Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
+E AK + D +++D R + ++ L++E+ + D +E
Sbjct: 577 IKE---AKEEADKILKDIRELERMGYSSDVRRLLEENRKKLK---------DKLEKTEAK 624
Query: 665 TSSFTPQFGEQVHVKSLGDKL--------ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
+ + GE V S GD+L V+ P + V VQ G M+++V ++R
Sbjct: 625 LNK-PKEVGEAVTNVSEGDELYLPKFDTKVMVLTNPDNKGDVQVQAGIMKIKVNIKDLRK 683
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+K + K+Q ++ S +++ S+DLRGM EEA++
Sbjct: 684 TKETK----------IEKRQRKKKQMSLN-----------LKSVATSVDLRGMDSEEATY 722
Query: 777 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
D L AC S + +IHG GTGV++ + ++L+ H V Y NYG
Sbjct: 723 TADKYLDDACMGGLSEVTIIHGKGTGVLRTAINDMLKRHHHVKSYRL---GNYG 773
>gi|269926462|ref|YP_003323085.1| MutS2 family protein [Thermobaculum terrenum ATCC BAA-798]
gi|269790122|gb|ACZ42263.1| MutS2 family protein [Thermobaculum terrenum ATCC BAA-798]
Length = 794
Score = 308 bits (790), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 252/809 (31%), Positives = 398/809 (49%), Gaps = 104/809 (12%)
Query: 26 QTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+T+ AL ++Q +P + + DI ++ A G +L PSE+ + T+ A N+ ++L +
Sbjct: 51 ETTEALRVLQLKPDITIGGARDIRSLVTKASLGGVLDPSELLQISDTIAAANSFSRQLGK 110
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK- 143
E D DS +S L L++ L++L ++I ID + + D AS L IR++ +
Sbjct: 111 VLE-DADS---FSLLSAQLRHIVDLSDLRKQIDAAIDDQAQV-RDSASTTLARIRSQLRS 165
Query: 144 ---RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
R M++L+SL+ + + + +P+IT+R R V ++A ++ +P GI +VS
Sbjct: 166 AHDRLMQHLNSLISSSSYR----DALQEPIITQRDGRYVVPVRADARHRIP-GIVHDVSG 220
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
SG T F+EP V+ N L E E IL+ L+ +A +I + + +D
Sbjct: 221 SGQTLFVEPLATVDMGNRITELRRQESEEIERILAQLSEAVASVASDIMRTLLALARLDF 280
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A A+A F+Q + P L S + + + +HPLL
Sbjct: 281 ALAKAKFSQHLHACEPELVSAEYEG--DKLFLPDARHPLL------------------GR 320
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
DV VPI I + + RV+VITGPNTGGKT ++KT GL SLM+ +
Sbjct: 321 DV------------------VPITIFLGGDFRVLVITGPNTGGKTVALKTTGLLSLMALS 362
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
GL+LP R+P ILADIGD QS+EQ+LSTFS H+ I +LE+ ++L+L+DE+
Sbjct: 363 GLHLPTSERARVPVLKYILADIGDEQSIEQSLSTFSSHVINIKKMLEVAGPDTLLLLDEL 422
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP EG A+A +I+ YL ++ L V TTHY ++ NAA EF LETL P
Sbjct: 423 GAGTDPEEGAAIAEAIIDYLLEKRALVVATTHYPEIKVYAQTTPGVTNAAVEFDLETLSP 482
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
TYR+ G G S A++IA+ +G + +I+ A+ R+ PE S L+E+
Sbjct: 483 TYRLTIGLPGRSYAIDIAQRLGLPKVVIEAAKS---RVSPE------SRAANDLLEQ--- 530
Query: 561 LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE---TQQVQQELNFAKVQIDT 617
+E++ + A AE + RE E+ R AA L+ E Q +++ A +++
Sbjct: 531 IEAEKKLADQRLAEAEQIRREAEELRS---RAAAELQEAERIREQALEEGYQQALRELED 587
Query: 618 VVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF--TPQFGEQ 675
V ++ + R SA + S + E A+ A+ R + S PQ G+
Sbjct: 588 VRREIDEVRRRLSASQAASKLGEIADALRAVENVERRVRKSTRGSKRPSVIRRLPQVGDS 647
Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
V +KS G + V+ + D T VQ G +R RV +++ + +
Sbjct: 648 VRIKSFGTE-GKVLSI--SDSTAEVQVGSLRSRVPLSDLEVVGGKQ-------------- 690
Query: 736 QEDRQSGSAGSSNEEASYGPRVQTS-----KNSLDLRGMRVEEASHQLDIAL--ACWESR 788
S +S++ + G R+ LDLRGMR EEA +LD L A +
Sbjct: 691 -------STETSSQTRTRGVRLNVDVRANISTELDLRGMRAEEALSKLDEYLNDAYIQGI 743
Query: 789 SVLFVIHGMGTGVVKERVLEILRNHPRVA 817
+IHG GTG +++ V +L+ HP V+
Sbjct: 744 PTARIIHGYGTGALRDAVRSMLQGHPLVS 772
>gi|392960889|ref|ZP_10326353.1| MutS2 protein [Pelosinus fermentans DSM 17108]
gi|421054879|ref|ZP_15517843.1| MutS2 family protein [Pelosinus fermentans B4]
gi|421058104|ref|ZP_15520836.1| MutS2 protein [Pelosinus fermentans B3]
gi|421063592|ref|ZP_15525555.1| MutS2 protein [Pelosinus fermentans A12]
gi|421071758|ref|ZP_15532871.1| MutS2 protein [Pelosinus fermentans A11]
gi|392439982|gb|EIW17670.1| MutS2 family protein [Pelosinus fermentans B4]
gi|392446346|gb|EIW23631.1| MutS2 protein [Pelosinus fermentans A11]
gi|392454456|gb|EIW31288.1| MutS2 protein [Pelosinus fermentans DSM 17108]
gi|392461473|gb|EIW37661.1| MutS2 protein [Pelosinus fermentans B3]
gi|392462624|gb|EIW38682.1| MutS2 protein [Pelosinus fermentans A12]
Length = 787
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 252/818 (30%), Positives = 392/818 (47%), Gaps = 97/818 (11%)
Query: 11 IPFGKSLEESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
IP K E +K+ A L M S PL I DI +L A G +L+P E+ AV
Sbjct: 35 IPSSKLAEVKEKIAETEEARGILDAMSSIPL--GGIRDIRTLLKRAEIGSVLAPDELVAV 92
Query: 69 RRTL---RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKL 124
TL R + N + + A + L Y+ + +L+N NF+ + + G D
Sbjct: 93 ASTLYASRRMKNFFMDMPVALTI----LLGYAEKINVLRNIENFIENIVNEQGQIRDDAS 148
Query: 125 LIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
+ +L E IR + R + LD +L+ Q + L+T R R + IK
Sbjct: 149 VELLHVRRE----IRLSQSRIKDKLDGILRSSEYQKY----FQDALVTVRNERYVIPIKQ 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
++ P GI + S+SGAT F+EP V NN +L+++E E IL T +IA
Sbjct: 201 EYRNHFP-GIIHDQSASGATVFVEPMAVVILNNEIKQLTSAEKNEIERILRSATEQIANV 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
I D + ID AFA+A + M PI++++ +V N+ +HPL+
Sbjct: 260 SETIYMNCDMLANIDFAFAKAKLSLTMQATMPIINNKGYV------NLRQARHPLIE--- 310
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+D VPIDI + + ++ITGPNTGGK
Sbjct: 311 --------------------------------ADVVVPIDIFIGKDFNTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KTLGL +LM++AGLY+P +N + F+ I ADIGD QS+EQ+LSTFS H++ +V
Sbjct: 339 TVTLKTLGLFALMTQAGLYIPVQNGSEIAVFNNIFADIGDEQSIEQSLSTFSAHMTNLVR 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
IL ++ E LVLIDEIG+GTDP EG ALA SIL++L + + TTHY++L
Sbjct: 399 ILNQITSEDLVLIDEIGAGTDPDEGAALAMSILEHLLNIGAKTIATTHYSELKTFAYSRQ 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
ENA+ EF ++TLRPTYR+L G G SNA I+K +G +II +A + +++
Sbjct: 459 GIENASVEFDIQTLRPTYRLLIGVPGSSNAFAISKRLGLSDRIIDQASQFIDK------D 512
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE-IEDEAKDLDRRAAHLKAKETQQ 603
H + E + +EE++ + + + + RE + E L + + AK ++
Sbjct: 513 HAEFETVLNALEEQKIAYDKLHEEVIQQEQTLHILREKLATEENVLAAKKHKILAKAQEE 572
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA---IAAIVEAHRPDDDFSV 660
+ L + + + ++ + + Q S I + +DD S+
Sbjct: 573 AESLLRKTRRETEEIITELKAQFTAKSNSSTRQGIFDKSRKRLRDNLENLNENEEDDNSL 632
Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
S TP G QV++ +L K TVV + ++ V+VQ G M++ V + R + +S
Sbjct: 633 PIVTASVLTP--GMQVYITTLKQK-GTVVSIGINE--VIVQLGIMKMNVAITDCRLVSDS 687
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD- 779
P ++ K + N + ++ ++Q +D+RGM VEEA + L
Sbjct: 688 V------PIKKISKDK-----------NRDKNF-MKIQDVARQIDIRGMMVEEAEYALGK 729
Query: 780 -IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
I A S + VIHG GTG +++ V L+NH V
Sbjct: 730 YIDDAIVAGLSTVLVIHGKGTGALRKGVRTYLKNHHYV 767
>gi|354559953|ref|ZP_08979193.1| MutS2 protein [Desulfitobacterium metallireducens DSM 15288]
gi|353539467|gb|EHC08953.1| MutS2 protein [Desulfitobacterium metallireducens DSM 15288]
Length = 792
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 247/842 (29%), Positives = 409/842 (48%), Gaps = 116/842 (13%)
Query: 18 EESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
++ Q L +T A+++ PL + ++I +L + G LSP E+ +R TL+A
Sbjct: 43 DQVQNALAETGEGKALLRVNPLFSVRGAKEIRPLLERCLRGGTLSPEELLHIRDTLKAAR 102
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
+ + L E +++ LQ E++ + +E++I CI + + D+AS L
Sbjct: 103 QIKQSLLEG-KMETPHLQ------EIVLGIDPPKGIEDEISRCISEEGSVA-DQASPQLG 154
Query: 137 LIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
R ++R + L+ +++ A Q + P+IT+R R V +K ++
Sbjct: 155 EFRRSITRLQQRIRDTLEGIVRNSAYQKI----LQDPIITQRSDRYVVPVKQEYRQAF-S 209
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S+SGAT ++EP V N + E E IL L+A++ I
Sbjct: 210 GIVHDQSASGATLYIEPMAVVNLGNELREVILKEQREVQRILLQLSAQVEGEAERIADAH 269
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ + ++D A++ ++ M+ P LS Q + + +HPLL GS
Sbjct: 270 EALAQVDFILAKSHLSESMNSGAPELSDQQEIKLVQA------RHPLLSGSV-------- 315
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
VP++I++ +VITGPNTGGKT +++T+G
Sbjct: 316 ----------------------------VPLNIELGKRFDTIVITGPNTGGKTVALRTVG 347
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L S M+++GL++PA+ + RL F I DIGD QS+EQ+LSTFSGH+ IVDI+
Sbjct: 348 LLSAMAQSGLHIPAEANSRLGIFTQIFVDIGDEQSVEQSLSTFSGHMKNIVDIVLGADSH 407
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SL+L+DEIG+GTDP+EG ALA SI+ L +R + TTHY L R ENA+ E
Sbjct: 408 SLILLDEIGAGTDPTEGAALAMSIITELHERGCRIIATTHYGALKSFAYNTPRVENASVE 467
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F +ETLRPTYR+L G G SNA IA +G + +++RA+ V ER+ + ++L
Sbjct: 468 FDVETLRPTYRLLIGIPGKSNAFYIASRLGLNDTVLERAKSFV----TEREM-QVADLID 522
Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE---TQQVQQELN 609
+L + +R +E + R I++E K ++ ++ LKAK + Q+ L
Sbjct: 523 NLEDTQRDIEREK--------------RRIQEERKTIETESSQLKAKSLKLEEDYQELLA 568
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS------VSET 663
A+ + V++ ++ + +++ +KE AI A + S E
Sbjct: 569 LAQDEATEVLRQTRHEA-ELLIEDLKQALKEENKDQHAIEHARQRIKKLSNKVGTKEKEI 627
Query: 664 NTSS---FTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
TS+ P+ G+ +++ L K V+++P D+ VLVQ G M++ V+ + +R +
Sbjct: 628 RTSAGGGINPEEIKLGQTLYLTKLRQK-GHVLKLPTDNGEVLVQVGVMKLNVQLSEVRLV 686
Query: 718 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 777
K + P ++ E G G S + Q + +DLRGM V+EA+ +
Sbjct: 687 QEEK---VSTP-----RRAETFGQGRIGMS--------KAQNVRTEIDLRGMMVKEATEE 730
Query: 778 LDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAY 833
LD L A ++++IHG GTG ++ + E L+ HP V + Q + G TV
Sbjct: 731 LDKYLDDAVLTGAGLVYIIHGKGTGALRAGIQEFLKGHPHVQSFRLGQHGEGDLGVTVVE 790
Query: 834 IK 835
+K
Sbjct: 791 LK 792
>gi|220931412|ref|YP_002508320.1| MutS2 family protein [Halothermothrix orenii H 168]
gi|254766598|sp|B8D298.1|MUTS2_HALOH RecName: Full=MutS2 protein
gi|219992722|gb|ACL69325.1| MutS2 family protein [Halothermothrix orenii H 168]
Length = 791
Score = 307 bits (786), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 258/815 (31%), Positives = 390/815 (47%), Gaps = 115/815 (14%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQR-YSPLLEL 102
I D+ I+ A G +LS E+ VR TL V + K E D LQ YS + E
Sbjct: 68 IRDLREIIEKADKGIVLSVKEVMDVRSTLEGVRELKKYSREIGTGIDDELQDIYSIITEK 127
Query: 103 LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ 162
L +LE +I CID + I D AS L IR E R ++ L +
Sbjct: 128 FDRLTPLKQLENEINRCID-EHGEIKDSASRKLRSIRREMDRIEGKINDKLNSIINNTRY 186
Query: 163 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
+ L+T R +R V +K+S+K GI + S+SG TYFMEP V+ NN L
Sbjct: 187 QEMLQDKLVTIRGNRYVVPVKSSYKNTFS-GIVHDQSTSGLTYFMEPMAIVKLNNRLGEL 245
Query: 223 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
+E E IL L+ I + R++ ++ V +D+ FARA F+ ++G+ P ++ +
Sbjct: 246 KRAEEQEIYRILKKLSENIKEHTRDLSDNLEMVSLLDVDFARARFSIEIEGIEPGINDKG 305
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
INI G +HPLL +K PVP
Sbjct: 306 F------INIRGGRHPLL----------------KVK--------------------PVP 323
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
IDI V E + +VITGPNTGGKT ++KT+GL LM +AGL++PA+ + F+ + ADI
Sbjct: 324 IDITVGNEFKTLVITGPNTGGKTVALKTVGLFVLMVQAGLHIPAEEETVISIFNGVYADI 383
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QS+EQNLSTFS HI+RI L SLVL+DEIG GTDP EG AL +IL++LR+
Sbjct: 384 GDEQSIEQNLSTFSSHINRIKRFLGKADARSLVLLDEIGVGTDPREGAALGVAILEHLRE 443
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
R + TTHY+++ ENA+ EF +ETL+PTYR+L G G SNA IA +G
Sbjct: 444 RGVTTIATTHYSEIKSYAYSQDGVENASVEFDMETLQPTYRLLMGIPGGSNAFEIALKLG 503
Query: 523 FDRKIIQRAQKL-------VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
II+ ++L VE + + + RK Y+ L K+E + R A E
Sbjct: 504 LPHDIIKDGKELMSGDDIKVENIISDLNEERKK--YEQL-----KIEIEERLEAVKKKE- 555
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--- 632
++ + DL++R L + ++ Q + + + +++ +N+ + +D
Sbjct: 556 ----QKYDSLLTDLEKRKKKLITEAREEALQIIKKTRKESKEILRRLKNKEFASRSDIDR 611
Query: 633 ---EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
EIN +KE+E I+ + D V E + G+QV +K G K V+
Sbjct: 612 VENEINLNLKETEKEISE--KRQNKDGRTRVKEISC-------GDQVRLKKTGQK-GEVI 661
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRP--IPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 747
V + ++Q G M+V + + IP+ K+ + +++K+
Sbjct: 662 SVDREKGEAVIQAGIMKVTTGLDEVAKIDIPDDT-KDELFHSYQVKKK------------ 708
Query: 748 NEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVV 802
+ P +LDLRG R E A H+L D+ LA + + +IHG GTG +
Sbjct: 709 ---SRVSP-------TLDLRGERYETAQHKLDKYLDDVFLAGLKQ---VEIIHGKGTGAL 755
Query: 803 KERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
++ V +L +P + Y ++ G T+A +K
Sbjct: 756 RKAVHTVLEKNPHITSYRLGRQEEGGSGVTIADLK 790
>gi|302389949|ref|YP_003825770.1| MutS2 family protein [Thermosediminibacter oceani DSM 16646]
gi|302200577|gb|ADL08147.1| MutS2 family protein [Thermosediminibacter oceani DSM 16646]
Length = 790
Score = 305 bits (782), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 242/827 (29%), Positives = 397/827 (48%), Gaps = 119/827 (14%)
Query: 26 QTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSE---ICAVRRTLRAVNNVWKK 81
+TS + +++S + L+ + DI L A G +L+ E I +V +T R V N W +
Sbjct: 49 ETSEGVTILRSGINIPLNELPDIRTSLKRATMGAVLTTGELLSIASVMKTSRLVKNTWSE 108
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
+ + +++ + + LE+KI I + I D AS L IR E
Sbjct: 109 ---------KGIAECRIIGSIIEEIHIFSSLEDKIHKAIISENEIA-DGASPRLSAIRKE 158
Query: 142 RK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
++ R E L+ + Q F + +P+IT R SR + +K + +P G+ +
Sbjct: 159 KRILFQRAKEKLELYISSPQYQKF----LQEPIITIRNSRYVIPVKQEFRSSIP-GVIHD 213
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S+SGAT ++EP ++ NN RL E E IL + +IA++ ++ + ++
Sbjct: 214 QSASGATLYLEPMPVLQINNELRRLEIEEQKEMEQILREFSEKIAENREYLEVTFEGLVR 273
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+D A+A ++ + GV P L+S+ + INI +HPLL G
Sbjct: 274 LDFILAKAKYSMDIKGVEPGLNSRGY------INIRKGRHPLLRGEV------------- 314
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
VPIDI + E V+VITGPNTGGKT S+KT+GL +LM
Sbjct: 315 -----------------------VPIDIYLGDEFTVLVITGPNTGGKTVSLKTVGLFALM 351
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
++AGL+LPA+ L F+ + ADIGD QS+EQ+LSTFS H+ I DI++ SLVL+
Sbjct: 352 AQAGLHLPAEEGTELSVFNEVFADIGDEQSIEQSLSTFSSHMKNIKDIVDKADSRSLVLL 411
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DE+G+GTDP+EG ALA +IL Y ++ V TTHY++L R ENA+ EF +ET
Sbjct: 412 DELGAGTDPTEGAALAMAILDYFCEKGTRVVATTHYSELKAFAYSMERMENASVEFDVET 471
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 557
L PTYR+ G G SNA IAK +G R+II+ A+ + R+ + +L + L +E
Sbjct: 472 LSPTYRLTIGIPGKSNAFEIAKRLGLKREIIELARSFL-----NRENIQLEDLLKGLEQE 526
Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
R + + + L + M +E+EDE + L R + AK ++ + + + +
Sbjct: 527 RERAKREKEEIQELKKQYMMRLKELEDEKEKLRNREEKILAKAREKARSIIEKVNKEAEK 586
Query: 618 VVQDFEN-------QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
+++ + Q+RD +E+ +K++ DD+S E
Sbjct: 587 ILERLKEVEAQDTRQVRDRIIEEVRRRLKKA-------------SDDYSPKEPLIKKAGA 633
Query: 671 QF-------GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
+ G++V V+SL + +V V + T VQ G M+V +
Sbjct: 634 KVVAGPINPGDKVRVESLNQE-GYIVSVDEREKTAQVQIGIMKVNL-------------- 678
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL- 782
P L K QE+ +G+ + + + +DLRG+ ++EA ++D L
Sbjct: 679 ----PLSSLVKIQEEEDKADSGNVKYSSLAMEKTREISREIDLRGLTLDEALLKVDKYLD 734
Query: 783 -ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
A + +IHG GTG++++ + ++L+ + + + MN G
Sbjct: 735 DASLAGLPSVVIIHGKGTGILRKGIQDMLKTRKDIKSF-RPGNMNEG 780
>gi|258512089|ref|YP_003185523.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478815|gb|ACV59134.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 776
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 251/839 (29%), Positives = 413/839 (49%), Gaps = 108/839 (12%)
Query: 9 AQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
A +PF + + +L A + + + IE + ++ A G +S E +
Sbjct: 33 AMVPFAERADAEAELARLDEAVRMLYRVGAPPFAGIESLEEVVQRARRGGTISADEANRL 92
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
R + + + + + AAE GD + L + L E++I +D +I
Sbjct: 93 ARCIAGMRAMRQFVERAAE-GGD----FPLLASSVAPMADLRRTEQEIRQVVDEDGQVI- 146
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS L +R E++R + ++L ++ QA + +P+I R C+ ++ HK
Sbjct: 147 DHASPTLLRLRDEKRRREAEIRTVLDRLLRT--QAKYLQEPVIAMRGEHYCLPVRVEHKS 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ +VSSSG+T F+EP+ VE + L E E +L L A +A+ +
Sbjct: 205 QIP-GMVRDVSSSGSTVFIEPRAIVELSERVRELEVLEEREVERLLYQLAAAVAQVADDF 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++ E+D FA+A +A+ +DG P L+ D + G +HP L +
Sbjct: 264 LRNLNVAAEMDFVFAKAAYARRVDGKRPRLT-------DGVWRLHGARHPKLHRDA---- 312
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
VPID+++ R+++ITGPNTGGKT ++
Sbjct: 313 --------------------------------VPIDVELGDRFRLLIITGPNTGGKTVTL 340
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM +GL+LP K + + + DIGD QS+EQNLSTFS H+ RI+D+LE
Sbjct: 341 KTIGLLTLMGMSGLFLPTKRESDIGFCRHVFVDIGDEQSIEQNLSTFSSHMRRIIDMLER 400
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V+ +SLVL+DE+G+GTDP+EG ALA +IL +L V TTHYA+L ++ EN
Sbjct: 401 VTPDSLVLLDELGAGTDPAEGSALAIAILDHLTSVGARVVATTHYAELKGYAFRNPAAEN 460
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNAL IA+ +G ++I++RA+ V +S
Sbjct: 461 ASMEFDVETLRPTYRLLMGVPGRSNALAIAERLGMPKEILERARSHVA----------ES 510
Query: 549 ELY-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA-------HLKAKE 600
+++ + L+ KLE+ +R A + E RE D+A DL R+ A ++ +
Sbjct: 511 DIHVEDLIG---KLEAASREAERMRDEAEQALREARDQAADLARQKAAWEASKDSMREQA 567
Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 660
++ ++ + A+ + D V+++ + LRD +A + + L++ + +EA P + +
Sbjct: 568 AREAREVIERARREADAVIREIRS-LRDRAAVKDHELVE-----LRKRLEAAEPGEKRAA 621
Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
+ + G++V V SLG K VVEV D +VQ G MR++V ++ + ++
Sbjct: 622 PRRRAQAEV-RPGQRVRVLSLGQK-GDVVEVAQDGRAAVVQLGAMRMKVDARDLEVVGDA 679
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ AA RL G A + + LD+RG V++A ++D
Sbjct: 680 Q-PAAAPSVTRL---------GGA-------------KDVRMELDVRGETVDDAISRIDK 716
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP--MNYGCTVAYIK 835
L A S + +IHG GTG ++ + LR+HP V E P G TV +++
Sbjct: 717 YLDDAVVAGISRVVIIHGKGTGALRNAIRRYLRDHPHVKSSEPAGPGEGGDGATVVHVR 775
>gi|384135955|ref|YP_005518669.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290040|gb|AEJ44150.1| MutS2 family protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 779
Score = 304 bits (778), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 257/843 (30%), Positives = 411/843 (48%), Gaps = 114/843 (13%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+A PF + +L A + + + IE +A ++ A G LS E
Sbjct: 35 RAMEPFPVRADAEAELARLDEAVRMLYRVGAPPFAGIESLAEVVKRAQRGGTLSADEANR 94
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ R + + + + + AAE GD + L + L E++I +D ++
Sbjct: 95 LARCIAGMRAMRQFVERAAE-GGD----FPLLASTVAPMADLRRTEQEIRQVVDEDGQVV 149
Query: 128 LDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
D AS L +R E++R LD LL+ QA + +P+I R C+ ++
Sbjct: 150 -DHASPTLLRLRDEKRRREAEIRAALDRLLRT------QAKYLQEPVIAMRGEHYCLPVR 202
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
HK +P GI +VSSSG+T F+EP+ VE + L E E +L L A +A+
Sbjct: 203 VEHKSQIP-GIVRDVSSSGSTVFIEPRTIVELSERVRELEVLEEREVERLLYQLAAAVAQ 261
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+ +D E+D FA+A +A+ +DG P L+ + + G +HP L
Sbjct: 262 VADDFLRTLDVAAEVDFVFAKAAYARRVDGKRPRLT-------EGVWRLYGARHPKLHRD 314
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+ VPID+++ R+++ITGPNTGG
Sbjct: 315 A------------------------------------VPIDVELGDRFRLLIITGPNTGG 338
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++KT+GL +LM +GL+LP K + + + DIGD QS+EQNLSTFS H+ RI+
Sbjct: 339 KTVTLKTIGLLTLMGMSGLFLPTKRESDIGFCRHVFVDIGDEQSIEQNLSTFSSHMRRII 398
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
D+LE V+ +SLVL+DE+G+GTDP+EG ALA +IL +L V TTHYA+L ++
Sbjct: 399 DMLERVTPDSLVLLDELGAGTDPAEGSALAIAILDHLTSVGARVVATTHYAELKGYAFRN 458
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
ENA+ EF +ETLRPTYR+L G G SNAL IA+ +G ++I++RA+ V E
Sbjct: 459 PAAENASMEFDVETLRPTYRLLMGVPGRSNALAIAERLGMPKEILERARSHV----AESN 514
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA-------HL 596
H + L+ KLE+ +R A + E RE D+A DL R+ A +
Sbjct: 515 IH-----VEDLIG---KLEAASREAERMRDEAERALREARDQAADLARQKAAWEASKDSM 566
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
+ + ++ ++ + A+ + D V+++ + LRD +A + + L++ + +EA P +
Sbjct: 567 REQAAREAREVIERARREADAVIREIRS-LRDRAAVKDHELVE-----LRKRLEAAEPGE 620
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
+ + + + G++V V SLG K VVEV D +VQ G MR++V +++
Sbjct: 621 KRTPARRRMRAEV-RPGQRVRVLSLGQK-GDVVEVAQDGRAAVVQLGAMRMKVDASDLEV 678
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ +++ AA RL G A + + LD+RG V++A
Sbjct: 679 VGDAQ-PAAAPSVTRL---------GGA-------------KDVRMELDVRGESVDDAIS 715
Query: 777 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP--MNYGCTVA 832
++D L A S + +IHG GTG ++ + LR+HP V E P G TV
Sbjct: 716 RIDKYLDDAVVAGISRVVIIHGKGTGALRTAIRRYLRDHPHVKSSEPAGPGEGGDGATVV 775
Query: 833 YIK 835
+++
Sbjct: 776 HVR 778
>gi|423072092|ref|ZP_17060854.1| MutS2 family protein [Desulfitobacterium hafniense DP7]
gi|361857227|gb|EHL09076.1| MutS2 family protein [Desulfitobacterium hafniense DP7]
Length = 789
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 246/833 (29%), Positives = 398/833 (47%), Gaps = 113/833 (13%)
Query: 24 LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +T +++ PL + +I ++ + G L+ E+ +R TL+A V + L
Sbjct: 49 LEETGEGKDILRINPLFSVRGAREIRPLVERCLKGGTLTTDELLQIRDTLKAARVVKQGL 108
Query: 83 TEA-AELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELI 138
E AE+ P L+ +++ +EE+I CI D + + D+AS L +
Sbjct: 109 QEGKAEV---------PHLKGIMEQVILPKGIEEEITRCITEDGQ---VADQASSVLADL 156
Query: 139 RAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R + R E LD +++ A Q + P++T+R R V +K ++ GI
Sbjct: 157 RRSISRLQTRIRETLDGIIRNPAYQKI----LQDPIVTQRSERYVVPVKQEYRQSF-QGI 211
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ S+SGAT ++EP V N + E E IL LL+A + I +
Sbjct: 212 VHDQSASGATLYIEPMAVVNLGNELREVVLKEQREVQRILLLLSARVEGEAEAIADAHEA 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D A+A ++ M+ PIL+ + +S + +HPLL G
Sbjct: 272 LARVDFILAKARLSEEMNAGAPILTEKQEISLVQA------RHPLLTGKV---------- 315
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
VP+ I++ VV+TGPNTGGKT ++KT+GL
Sbjct: 316 --------------------------VPLTIQLGTRFDTVVVTGPNTGGKTVALKTIGLL 349
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+ M++ GL++PA++ R+ F I ADIGD QS+EQ+LSTFSGH+ IV+I+E SL
Sbjct: 350 AAMAQCGLHIPAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVEKADWRSL 409
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L+DE+G+GTDP+EG ALA +I+ L +R V TTHY L TR ENA+ EF
Sbjct: 410 ILLDEVGAGTDPTEGSALAMAIIAELHERGARIVATTHYGALKNFAYNTTRVENASVEFD 469
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
ETLRPTYR+L G G SNA IA +G ++ RA+ V ER+ ++L ++L
Sbjct: 470 SETLRPTYRLLIGIPGKSNAFYIAGRLGLPEGVLDRARTFV----TEREMQ-VADLIENL 524
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
+ +R+++ + R A I ++++++ L+ L AK Q + + A+ +
Sbjct: 525 EDTQREIDLEKRRAREERQAIEKESLGLKEKSQKLEDDYQELMAKARDQATEIVREARRE 584
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP---- 670
+ ++ + + L++ D+ I+++ I + V + +T TP
Sbjct: 585 AERLIDELKLALKEERKDQ--QAIEKTRQGIRKL--------SNKVGDQDTPLRTPHGVE 634
Query: 671 ----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
+ G+ V++ L K V+++P D V VQ G +++ V + IR I K AA
Sbjct: 635 PQEIKLGQMVYMTKLRQK-GQVLKLPNDSGEVFVQAGVIKLNVPLSEIRLIQEEK---AA 690
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
P R G G + + +T + +DLRGM VEEA ++LD L A
Sbjct: 691 KPT---------RSVGGQGKVGMK-----KAETIRTEIDLRGMMVEEAGYELDKYLDDAV 736
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
++VIHG GTG +++ + E LR H V + Q + G TV +K
Sbjct: 737 LTGVGQVYVIHGKGTGALRQGIHEFLRGHHHVKSFRLGQHGEGDLGVTVVELK 789
>gi|253682073|ref|ZP_04862870.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum D str. 1873]
gi|253561785|gb|EES91237.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum D str. 1873]
Length = 785
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 240/752 (31%), Positives = 373/752 (49%), Gaps = 102/752 (13%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D ++Y+ L + + L+ LEE+I CI + I DRAS L IR K ++
Sbjct: 110 DENEKYTVLESITEGIVPLSGLEEEIFKCIIGEEEI-SDRASTTLFNIRRSLKDKTSSIK 168
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
S + + Q + + + T R R + +K HK +P G+ + SSSGAT F+EP
Sbjct: 169 SRVNSLIRTYSQH--LQENIYTVRGERYVLPVKVEHKGAVP-GLVHDQSSSGATLFIEPM 225
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V+ NN L E E IL++L+ ++ + IK D + E+D FA+A +A
Sbjct: 226 SLVDLNNEIKELRLKERDEIERILTVLSQKVYDNIDVIKVNADILWELDFIFAKAKYAAK 285
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
+D +CP ++ H NI KHPL+ +P K VEN+
Sbjct: 286 LDAICPTITEDGH------FNIIRAKHPLI---------------DP-KKVVENNIY--- 320
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
L GI+ +VITGPNTGGKT ++KT+GL +M+ +GL + A
Sbjct: 321 -LRDGITS---------------LVITGPNTGGKTVTLKTVGLMHIMAMSGLMITASQGS 364
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
+ +F + ADIGD QS+EQ+LSTFS H++ IV+I++ SLVL DE+G+GTDP+EG
Sbjct: 365 TISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDNADENSLVLFDELGAGTDPTEGA 424
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA SIL+ LR+R + TTHY++L K R ENA+ EF +ETLRPTYR+L G G
Sbjct: 425 ALAVSILENLRERNTKVIATTHYSELKAYALKVDRVENASVEFDVETLRPTYRLLIGVPG 484
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
SNA I+K +G II+ A+K + + + + +L QSL + K + AR A
Sbjct: 485 KSNAFEISKRLGLPDYIIEDAKKGI-----DEETLKFEDLIQSLQHKNIKAQEHAREAQG 539
Query: 571 LHAEIMDLYREIE---DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 627
E + L + E D+ KD+ +A KE +++ +E AK + D +++D R
Sbjct: 540 AREEAVKLKEKYESKLDKFKDIREKAILNAQKEAKEIIKE---AKEEADKILKDIRELER 596
Query: 628 DASADEINSLIKESE-----SAIAAIVEAHRPDDDF----SVSETNTSSFTPQFGEQVHV 678
+ ++ L++E+ + ++P D VSE + + P+F +V
Sbjct: 597 MGYSSDVRKLLEENRKKLKEKLEKTEEKLNKPKDVGEPIDKVSEGD-EVYLPKFDTKV-- 653
Query: 679 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQED 738
V+ P V VQ G M+++V ++R +K + K+Q
Sbjct: 654 --------MVLTNPDSKGDVQVQAGIMKIKVNIKDLRKTKETK----------IEKRQRK 695
Query: 739 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHG 796
++ S +++ +S+DLRGM +EA + D L AC S + +IHG
Sbjct: 696 KREVSLN-----------LKSVASSVDLRGMDSQEAVYTADKYLDDACMGGLSEVTIIHG 744
Query: 797 MGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
GTG+++ + ++L+ HP V Y NYG
Sbjct: 745 KGTGILRNAINDMLKRHPHVKSYRL---GNYG 773
>gi|89893029|ref|YP_516516.1| hypothetical protein DSY0283 [Desulfitobacterium hafniense Y51]
gi|219666299|ref|YP_002456734.1| MutS2 family protein [Desulfitobacterium hafniense DCB-2]
gi|89332477|dbj|BAE82072.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536559|gb|ACL18298.1| MutS2 family protein [Desulfitobacterium hafniense DCB-2]
Length = 789
Score = 303 bits (777), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 246/833 (29%), Positives = 398/833 (47%), Gaps = 113/833 (13%)
Query: 24 LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +T +++ PL + +I ++ + G L+ E+ +R TL+A V + L
Sbjct: 49 LEETGEGKDILRINPLFSVRGAREIRPLVERCLKGGTLTTDELLQIRDTLKAARIVKQGL 108
Query: 83 TEA-AELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELI 138
E AE+ P L+ +++ +EE+I CI D + + D+AS L +
Sbjct: 109 QEGKAEV---------PHLKGIMEQVILPKGIEEEITRCITEDGQ---VADQASSVLADL 156
Query: 139 RAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R + R E LD +++ A Q + P++T+R R V +K ++ GI
Sbjct: 157 RRSISRLQTRIRETLDGIIRNPAYQKI----LQDPIVTQRSERYVVPVKQEYRQSF-QGI 211
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ S+SGAT ++EP V N + E E IL LL+A + I +
Sbjct: 212 VHDQSASGATLYIEPMAVVNLGNELREVVLKEQREVQRILLLLSARVEGEAEAIADAHEA 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D A+A ++ M+ PIL+ + +S + +HPLL G
Sbjct: 272 LARVDFILAKARLSEEMNAGAPILTEKQEISLVQA------RHPLLTGKV---------- 315
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
VP+ I++ VV+TGPNTGGKT ++KT+GL
Sbjct: 316 --------------------------VPLTIQLGTRFDTVVVTGPNTGGKTVALKTIGLL 349
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+ M++ GL++PA++ R+ F I ADIGD QS+EQ+LSTFSGH+ IV+I+E SL
Sbjct: 350 AAMAQCGLHIPAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVEKADWRSL 409
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L+DE+G+GTDP+EG ALA +I+ L +R V TTHY L TR ENA+ EF
Sbjct: 410 ILLDEVGAGTDPTEGSALAMAIIAELHERGARIVATTHYGALKNFAYNTTRVENASVEFD 469
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
ETLRPTYR+L G G SNA IA +G ++ RA+ V ER+ ++L ++L
Sbjct: 470 SETLRPTYRLLIGIPGKSNAFYIAGRLGLPEGVLDRARTFV----TEREMQ-VADLIENL 524
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
+ +R+++ + R A I ++++++ L+ L AK Q + + A+ +
Sbjct: 525 EDTQREIDLEKRRAREERQAIEKESLGLKEKSQKLEDDYQELMAKARDQATEIVREARRE 584
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP---- 670
+ ++ + + L++ D+ I+++ I + V + +T TP
Sbjct: 585 AERLIDELKLALKEERKDQ--QAIEKTRQGIRKL--------SNKVGDQDTPLRTPHGVE 634
Query: 671 ----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
+ G+ V++ L K V+++P D V VQ G +++ V + IR I K AA
Sbjct: 635 PQEIKLGQMVYMTKLRQK-GQVLKLPNDSGEVFVQAGVIKLNVPLSEIRLIQEEK---AA 690
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
P R G G + + +T + +DLRGM VEEA ++LD L A
Sbjct: 691 KPT---------RSVGGQGKVGMK-----KAETIRTEIDLRGMMVEEAGYELDKYLDDAV 736
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
++VIHG GTG +++ + E LR H V + Q + G TV +K
Sbjct: 737 LTGVGQVYVIHGKGTGALRQGIHEFLRGHHHVKSFRLGQHGEGDLGVTVVELK 789
>gi|147678274|ref|YP_001212489.1| mismatch repair ATPase [Pelotomaculum thermopropionicum SI]
gi|238686642|sp|A5D0W6.1|MUTS2_PELTS RecName: Full=MutS2 protein
gi|146274371|dbj|BAF60120.1| mismatch repair ATPase [Pelotomaculum thermopropionicum SI]
Length = 785
Score = 303 bits (776), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 251/805 (31%), Positives = 395/805 (49%), Gaps = 95/805 (11%)
Query: 25 NQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
+TS +++ +P + +DI L A G +L P E+ AV TL A + K
Sbjct: 48 EETSEGRKLLRLEPFAEAGGWKDIRAQLRKAGQGAILDPEELLAVADTLTAGRTIRKFFQ 107
Query: 84 EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR---- 139
D ++Y L E+ L ELE KI I + D AS +L IR
Sbjct: 108 -------DRQEQYPLLYEVSSALVSLPELERKIKNAI-LPGGEVADGASPELAQIRRRLA 159
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
A + + E+L+ +++ + Q + + +P++T R R V +K H+ +P GI + S
Sbjct: 160 AAQAQVKEHLEHIIRSPSYQKY----LQEPIVTIREGRYVVPVKIEHRSQVP-GIVHDQS 214
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
+SGAT F+EP VE NN RL +E E IL+ L+A +A+ I ++ + E+D
Sbjct: 215 ASGATLFIEPMAVVEKNNELRRLMAAEKREIQRILAELSAGVAQHAGPIGASLEALGELD 274
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
ARA ++Q +D P+L ++ ++I +HPLL G
Sbjct: 275 FIMARARYSQKLDAWAPLLEG------EACMDIRRGRHPLLQGEV--------------- 313
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VPIDI++ + +VITGPNTGGKT ++KT GL LM++
Sbjct: 314 ---------------------VPIDIRLGADFDTLVITGPNTGGKTVALKTAGLLVLMAQ 352
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
+GL++PA RL F + ADIGD QS+EQ+LSTFS H++ IV+I+ +SLVL+DE
Sbjct: 353 SGLHIPAGEGSRLGIFRQVFADIGDEQSIEQSLSTFSSHMNNIVEIIGKAGPDSLVLLDE 412
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+G+GTDP+EG ALA SIL+ L V TTHY +L R ENA+ EF TLR
Sbjct: 413 LGAGTDPAEGAALAQSILEKLHSAGAKTVATTHYGELKDFALTRERVENASVEFDAITLR 472
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEE 557
PTYR+L G G SNA IA +G ++++RA+ + E ++ E EL +SL +
Sbjct: 473 PTYRLLIGKPGRSNAFEIAARLGLPEEVVKRARSFLTAEHIQAE-------ELMRSLEKT 525
Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
+++ E++ R AA L +E L E DL + + +K ++ Q + A+++ +
Sbjct: 526 QQEAEAERRRAAELASEARALKERYEKIEADLASKRESILSKAAEEAQALVRAARLEAEA 585
Query: 618 VVQDFENQLRDASADEINSLIKESESAIAAIVE-AHRPDDDFSVSETNTSSFTPQFGEQV 676
V++ ++ + +A E + I+E+ + + + R + +V + P GE+V
Sbjct: 586 AVRELREKMAEEAARERENAIREAREKLRKLQQRVGRAVPEKTVPGEAPAGLRP--GEEV 643
Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 736
+ K V+E PG VLVQ G +++ V P LR+ +
Sbjct: 644 FLTRYNQK-GYVLEPPGAGGEVLVQVGVIKMNV------------------PLRELRRVK 684
Query: 737 EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVI 794
E R +G G S + + LDLRG+ +EA +++ L A S +++I
Sbjct: 685 EARPAG--GQSEVAGVLLNKAREISPELDLRGLYADEALLEVEKYLDDAYLAGLSRVYLI 742
Query: 795 HGMGTGVVKERVLEILRNHPRVAKY 819
HG GTG ++ + L H RV +
Sbjct: 743 HGKGTGSLRAAIHRQLSGHRRVKSF 767
>gi|392391882|ref|YP_006428484.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390522960|gb|AFL98690.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 789
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 249/837 (29%), Positives = 395/837 (47%), Gaps = 121/837 (14%)
Query: 24 LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +T ++++ PL + +I L + G L+P E+ +R TL+A + + L
Sbjct: 49 LEETGEGKSILRINPLFSVRGAREIRPYLERCLKGGTLTPDELLHIRDTLKAARIIKQSL 108
Query: 83 ----TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLE 136
TE L G +++ +EE+I CI D + + D+AS L
Sbjct: 109 QEGKTEVPHLKG-----------IMEQVILPKGIEEEITRCITEDGQ---VADQASPALA 154
Query: 137 LIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
+R + R E LD +++ A Q + P+IT+R R V +K ++ P
Sbjct: 155 DLRRGVSRLQTRIRETLDGIIRNPAYQKI----LQDPIITQRSERYVVPVKQEYRQSFP- 209
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S+SGAT ++EP V N + E E IL LL++ + I
Sbjct: 210 GIVHDQSASGATLYIEPMAVVNLGNELREVVLKEQREVQRILLLLSSRVEGEAEAIADAH 269
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ + +D A+A ++ M+ P+L+ + +S + +HPLL G
Sbjct: 270 EALARVDFILAKARLSEEMNAGAPVLTEKQEISLVQA------RHPLLTGKV-------- 315
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
VP+ I++ VV+TGPNTGGKT ++KT+G
Sbjct: 316 ----------------------------VPLTIQLGTRFDTVVVTGPNTGGKTVALKTIG 347
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L + M++ GL++PA++ R+ F I ADIGD QS+EQ+LSTFSGH+ IV+I++ R
Sbjct: 348 LLAAMAQCGLHIPAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIVQKADRR 407
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SL+L+DE+G+GTDP+EG ALA +I+ L +R V TTHY L TR ENA+ E
Sbjct: 408 SLILLDEVGAGTDPTEGSALAMAIIAELHERGARIVATTHYGALKNFAYNTTRVENASVE 467
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F E+LRPTYR+L G G SNA IA +G ++ RA+ V ER+ ++L +
Sbjct: 468 FDSESLRPTYRLLVGIPGKSNAFYIAGRLGLPEGVLDRARTFV----TEREMQ-VADLIE 522
Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
+L + +R+++ + R A + + IE E+ L ++ L+ + Q+ + AK
Sbjct: 523 NLEDTQREIDLEKRRA-------REERQAIEKESIGLKEKSQKLE----DEYQELMAMAK 571
Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS--VSETNTSSFTP 670
Q +V++ + + DE+ +KE AI + S V E +T +
Sbjct: 572 DQAVEIVREARREA-ERLIDELKLALKEERKDQQAIERTRQGIRKLSNKVGEQDTPARAT 630
Query: 671 Q--------FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
Q G+ V++ L K V+++P + VQ G +++ V + IR I K
Sbjct: 631 QGVDPQEIKLGQMVYMTKLRQK-GQVLKLPNASGEIFVQAGVIKLNVPLSEIRLIQEEK- 688
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
A P R G G + + +T + +DLRGM VEEAS++LD L
Sbjct: 689 --VAKPT---------RSVGGQGKVGMK-----KAETIRTEIDLRGMMVEEASYELDKYL 732
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
A ++VIHG GTG ++ + E LR H V + Q + G TV +K
Sbjct: 733 DDAVLTGVGQVYVIHGKGTGALRLGIHEFLRGHHHVKSFRLGQHGEGDLGVTVVELK 789
>gi|255658182|ref|ZP_05403591.1| DNA mismatch repair protein MutS [Mitsuokella multacida DSM 20544]
gi|260849490|gb|EEX69497.1| DNA mismatch repair protein MutS [Mitsuokella multacida DSM 20544]
Length = 794
Score = 303 bits (775), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 257/833 (30%), Positives = 403/833 (48%), Gaps = 97/833 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+E + L +T+ A+ ++++ I DI +L A G +L EI TL A+
Sbjct: 40 FDEVAEWLAETTEAVTVLETAMPPFGGIFDIRPLLKKAKMGAVLDLDEIMNTMSTLAAMR 99
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
+V K+ ELD +L+ ++ +E+L +LE + +D + D AS +L
Sbjct: 100 SV-KRFFRDIELDVPTLKEWARSIEIL------GQLERLLDNTVDEHGAMRED-ASVELR 151
Query: 137 LIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
IR E + E + S+L Q F ++T R R + +K ++ P
Sbjct: 152 RIRRELHAAQAHIKERISSILHNAEYQKF----FQDAIVTVRDERYVIPVKQEYRSRFP- 206
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S++GAT F+EP VE NN +L+ +E E IL LTAEI+K ++
Sbjct: 207 GIVHDQSATGATLFIEPMAVVELNNDVKQLTLAEQQEIQRILRHLTAEISKQSAILQENC 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ ID AFA+A A+ M P LS + + +HP +
Sbjct: 267 RILGAIDFAFAKAKLAKDMAANRPELSREGRTDLKQA------RHPFI------------ 308
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
D VPIDI++ + R+++ITGPNTGGKT SMKTLG
Sbjct: 309 -----------------------AKDKVVPIDIRIGEDYRMLLITGPNTGGKTVSMKTLG 345
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L++++G YLP P + + I ADIGD QS+EQ+LSTFS H++ IV IL+ V +
Sbjct: 346 TMVLLAQSGCYLPTAPDPVIAVYPNIYADIGDEQSIEQSLSTFSAHMTHIVRILQEVEED 405
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
LVL+DE+G+GTDP EG ALA +IL+ L + TTHY++L ENA E
Sbjct: 406 DLVLLDELGAGTDPEEGAALAMAILEKLLQLRVTTIATTHYSELKTFAYSREGIENACVE 465
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL-Y 551
F ++TLRPTYR+L G G SNA I++ +G +I RAQ+LV + + +H +EL
Sbjct: 466 FDVKTLRPTYRLLIGMPGASNAFAISRRLGLSESLILRAQQLV-KADHAQFEHVINELEN 524
Query: 552 QSLMEERRK---LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
+ +M E+R LE Q R L A++ E+ + +L R+A A ++ ++E
Sbjct: 525 EKMMYEQRNADILERQQRV-TELEAKVARTKEELSKKKGELIRKAREQSAAMVRRTRRE- 582
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD---DDFSVSETNT 665
+ ++++ + Q D I+++ + + E RP +
Sbjct: 583 ------SEAIIKELKEQFDDQGIKRRQQAIQDARAKLNEAFEKSRPGIMAQKGVGKAVSL 636
Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR--K 723
S P G+ V+VK L D+ TV+EV G + T VQ G + +VK + R + ++ + K
Sbjct: 637 KSIKP--GDIVYVKKL-DQKGTVLEVQGKELT--VQIGSLHTKVKASACRFLDHAPKEPK 691
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL- 782
A+ PA ++ S + S+ + QT +D+RGM V+EA + L
Sbjct: 692 GASVPA-------------ASSSRRQSNSFMQKTQTIGREIDIRGMMVDEAEVVVGKFLD 738
Query: 783 -ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
A S + +IHG GTG +++ + E LR H V + Q + + G T A +
Sbjct: 739 DAVMAGLSQVLIIHGKGTGALRKGIHEYLRRHRNVESF-QFADITEGGTGATV 790
>gi|421078676|ref|ZP_15539628.1| MutS2 protein [Pelosinus fermentans JBW45]
gi|392523253|gb|EIW46427.1| MutS2 protein [Pelosinus fermentans JBW45]
Length = 787
Score = 302 bits (774), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 243/801 (30%), Positives = 386/801 (48%), Gaps = 105/801 (13%)
Query: 31 LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAE 87
L M S PL I DI +L A G +L+P E+ AV TL R + N + +
Sbjct: 57 LDAMSSIPL--GGIRDIRTLLKRAEIGSVLAPDELVAVASTLYASRRMKNFFMDMPVTLI 114
Query: 88 LDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNM 146
+ L Y+ + +L+N NF+ + + G D + +L E IR + R
Sbjct: 115 I----LLGYAEKINVLRNVENFIENIVNEQGQIRDDASVELLHVRRE----IRLSQSRIK 166
Query: 147 ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 206
+ LD +L+ Q + L+T R R + IK ++ P GI + S+SGAT F
Sbjct: 167 DKLDGILRSSEYQKY----FQDALVTVRNERYVIPIKQEYRNHFP-GIIHDQSASGATVF 221
Query: 207 MEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAG 266
+EP V NN +L+++E E IL T +IA I D + ID AFA+A
Sbjct: 222 VEPMAVVILNNEIKQLTSAEKNEIERILRSATEQIANVSETIYMNCDMLANIDFAFAKAK 281
Query: 267 FAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 326
+ M PI++++ +V N+ +HPL+
Sbjct: 282 LSLTMQASMPIINNKGYV------NLRQARHPLIE------------------------- 310
Query: 327 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 386
+D VPIDI + + ++ITGPNTGGKT ++KTLGL +LM++AGLY+P
Sbjct: 311 ----------ADVVVPIDIFIGKDFNTLLITGPNTGGKTVTLKTLGLFALMTQAGLYIPV 360
Query: 387 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 446
+N + F+ I ADIGD QS+EQ+LSTFS H++ +V IL +S E LVLIDEIG+GTDP
Sbjct: 361 QNGSEIAVFNNIFADIGDEQSIEQSLSTFSAHMTNLVRILNQISSEDLVLIDEIGAGTDP 420
Query: 447 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
EG ALA SIL++L + + TTHY++L ENA+ EF ++TLRPTYR+L
Sbjct: 421 DEGAALAMSILEHLLNIGAKTIATTHYSELKTFAYSRQGIENASVEFDIQTLRPTYRLLI 480
Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR 566
G G SNA I+K +G +II++A + +++ H + E + +EE++ +
Sbjct: 481 GVPGSSNAFAISKRLGLSDRIIEQASQFIDK------DHAEFETVLNALEEQKIAYDKLH 534
Query: 567 TAASLHAEIMDLYRE-IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
+ + + RE + E L + + AK ++ + L + + + ++ + + Q
Sbjct: 535 EEVIQQEQTLQILREKLATEESILAAKKHKILAKAQEEAESLLRKTRRETEEIITELKAQ 594
Query: 626 L--------RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVH 677
R D+ ++++ + E P + + TP G QV+
Sbjct: 595 FTAKSNSSTRQGIFDKSRKRLRDNLENLNENEEDDNP-----LPIVTANVLTP--GMQVY 647
Query: 678 VKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQE 737
+ +L K TVV + ++ V VQ G M++ V + R + ++ P ++ K +
Sbjct: 648 ITTLKQK-GTVVSIATNE--VTVQLGIMKMNVAITDCRLVSDN------FPIKKIAKDK- 697
Query: 738 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIH 795
N + ++ ++Q +D+RGM VEEA + L I A S + VIH
Sbjct: 698 ----------NRDKNF-MKIQDVARQIDIRGMMVEEAEYTLGKYIDDAIVAGLSTVLVIH 746
Query: 796 GMGTGVVKERVLEILRNHPRV 816
G GTG +++ V L+NH V
Sbjct: 747 GKGTGALRKGVRTYLKNHHYV 767
>gi|331269166|ref|YP_004395658.1| MutS2 family protein [Clostridium botulinum BKT015925]
gi|329125716|gb|AEB75661.1| MutS2 family protein [Clostridium botulinum BKT015925]
Length = 785
Score = 301 bits (772), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 239/754 (31%), Positives = 372/754 (49%), Gaps = 106/754 (14%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D ++Y+ L + + L+ LEE+I CI + + DRAS L IR K ++
Sbjct: 110 DENEKYTVLESITEGIVPLSGLEEEIFKCIIGEDEL-SDRASTTLFNIRRSLKDKTSSIK 168
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
S + + Q + + + T R R + +K HK +P G+ + SSSGAT F+EP
Sbjct: 169 SRVNSLIRTYSQH--LQENIYTVRGERYVLPVKVEHKGAVP-GLVHDQSSSGATLFIEPM 225
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V+ NN L E E IL++L+ ++ + IK D + E+D FA+A +A
Sbjct: 226 SLVDLNNEIKELRLKERDEIERILTVLSGKVYDNIDVIKVNADILWELDFIFAKAKYAAK 285
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
+D +CP +S H NI KHPL+ K VEN+
Sbjct: 286 LDAICPTISEDGH------FNIIRAKHPLI----------------DTKKVVENNIY--- 320
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
L +GI+ +VITGPNTGGKT ++KT+GL +M+ +GL + A
Sbjct: 321 -LREGITS---------------LVITGPNTGGKTVTLKTVGLMHIMAMSGLMITAAQGS 364
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
+ +F + ADIGD QS+EQ+LSTFS H++ IV+I++ SLVL DE+G+GTDP+EG
Sbjct: 365 TISFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIIDNADENSLVLFDELGAGTDPTEGA 424
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA SIL+ LR+R + TTHY++L K R ENA+ EF +ETLRPTYR+L G G
Sbjct: 425 ALAVSILENLRERNTKVIATTHYSELKAYALKVDRVENASVEFDVETLRPTYRLLIGVPG 484
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
SNA I+K +G II+ A+K + + + + +L QSL + K + AR A
Sbjct: 485 KSNAFEISKRLGLPDYIIEDAKKGI-----DEETLKFEDLIQSLQHKNIKAQEHAREAEG 539
Query: 571 LHAEIMDLYREIE---DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 627
E + L + E D+ KD+ +A KE +++ +E AK + D +++D R
Sbjct: 540 AREEAVKLKEKYENKLDKFKDIREKAILNAQKEAKEIIKE---AKEESDKILKDIRELER 596
Query: 628 DASADEINSLIKESESAIAAIV-----------EAHRPDDDFSVSETNTSSFTPQFGEQV 676
+ ++ L++E+ + + E P D V+E + + P+F +V
Sbjct: 597 MGYSSDVRKLLEENRKKLKEKLEKTEEKLNKPKEIGEPID--KVAEGD-EVYLPKFDTKV 653
Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 736
V+ P V VQ G M+++V ++R +K + K+Q
Sbjct: 654 ----------MVLTNPDSKGDVQVQAGIMKIKVNIKDLRKTKETK----------IEKRQ 693
Query: 737 EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVI 794
++ S +++ +S+DLRGM +EA + D L AC S + +I
Sbjct: 694 RKKREVSLN-----------LKSVASSVDLRGMDSQEAVYTADKYLDDACMGGLSEVTII 742
Query: 795 HGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
HG GTG+++ + ++L+ HP V Y NYG
Sbjct: 743 HGKGTGILRNSINDMLKRHPHVKSYRL---GNYG 773
>gi|390456779|ref|ZP_10242307.1| MutS2 protein [Paenibacillus peoriae KCTC 3763]
Length = 788
Score = 301 bits (772), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 258/821 (31%), Positives = 400/821 (48%), Gaps = 108/821 (13%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE +KLL T A A ++ P + + DI + A G LSP E+ +R T++A
Sbjct: 40 LEHIKKLLKGTDEAYAADRLKGVP-SFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ + SL +P+ LL L+E LE I CID + LD A
Sbjct: 99 ARRIQVCVA--------SLHEENPVETLLFWSEQLSEQRSLENSIKGCIDENAEV-LDSA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
S +L IR E + R E LDS+++ +++ Q LIT R R + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + S SGAT F+EP+ V NN E E IL LTA +A+
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ Y +D + +D FA+A A+ M P+++ + ++ +HPL+
Sbjct: 264 MLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
PL+ VPID+++ +++TGPNTGGKT
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL SLM+ +GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ ++ +SLVL+DE+G+GTDP+EG ALA SIL+++ V TTHY++L +
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHMHAMGCRMVATTHYSELKAYAYERKGI 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NA+ EF + TL PTYR+L G G SNA IA+ +G +I+ A+ V + R
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPSRILDYARGEV-----TEEDQR 517
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ SL + R E + A L E+ L + E L+ + + K + +
Sbjct: 518 VEHMIASLEQNRLTAEQEREKAEQLRTEMEALRSRHQTELDKLESQRDRMLEKAEDEARV 577
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE------AHRPDDDFSV 660
++ A+ + + ++ D LR + +E S +KE + IAA E R +
Sbjct: 578 LVDKARSEAEKIISD----LRKLAQEEGAS-VKEHK-LIAARKELDEAEPKQRKKNTVKR 631
Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
+ T T S G++V V SL K VVE+ G + V VQ G M+++V +++ +
Sbjct: 632 AATRTRSIMA--GDEVSVHSLNKK-GHVVELSGSKEAV-VQLGIMKMKVSLDDLELL--- 684
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ A PAPR++K +G + ++ +N LDLRG VEEA ++D
Sbjct: 685 --QPAQTPAPRVQKP----VTGVKRTRDDNV---------RNELDLRGANVEEALIEVDR 729
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ A + + +IHG GTGV++ + E LR H V Y
Sbjct: 730 FMDEAFLANLGQVHIIHGKGTGVLRTGIQEYLRKHKHVKSY 770
>gi|304404921|ref|ZP_07386581.1| MutS2 family protein [Paenibacillus curdlanolyticus YK9]
gi|304345800|gb|EFM11634.1| MutS2 family protein [Paenibacillus curdlanolyticus YK9]
Length = 788
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 246/801 (30%), Positives = 399/801 (49%), Gaps = 95/801 (11%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I D+ L A G L+P+E+ + T+R+ V K + + D D + PLL +
Sbjct: 68 IVDLTASLKRARIGGTLNPAELLEIAETIRSGRRVKKHVLQLH--DDDPI----PLLHDI 121
Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
+ L+E E+ I CID + +D+AS +L +R R + N +S +++ Q+
Sbjct: 122 --ADLLSEHKPTEDAIFACIDDNAEV-MDQASPELASVR----RELRNGESRIREKLEQM 174
Query: 161 FQAGGIDKPL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
++ + K L IT R R + +K+ ++ GI + SSSGAT F+EP+ V N
Sbjct: 175 IRSSSVQKMLQDAIITLRNDRYVIPVKSEYRSNF-GGIVHDQSSSGATMFIEPEVIVSMN 233
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N L +E E +L LTA A+ ++ + + +D AFA+A A + P
Sbjct: 234 NKLRELRANEEREIEKVLQKLTAIAAEVSDDLLADAEGLGMLDFAFAKARLAHELKATLP 293
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+++ + + +HPLL
Sbjct: 294 LMNDRGFLKLKRG------RHPLL-----------------------------------A 312
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
+D VPID+++ +++TGPNTGGKT S+KT+GL SLMS +GL++PA++ ++ FD
Sbjct: 313 ADAVVPIDVELGNSFSTIIVTGPNTGGKTVSLKTIGLLSLMSMSGLFIPAEDGSQMCVFD 372
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA +I
Sbjct: 373 AIYADIGDEQSIEQNLSTFSSHLTNIIRILNAMTPKSLVLLDELGAGTDPAEGSALAIAI 432
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L+++ + V TTHY++L NA+ EF + TL PTYR+L G G SNA
Sbjct: 433 LEHIHRKGSRIVATTHYSELKAYAYNRNGVINASMEFDVATLSPTYRLLVGVPGRSNAFA 492
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
IA+ +G ++II A+ V R + SL E+R E++ ++A SL E+
Sbjct: 493 IAERLGLSQQIIDHARGEV-----SEDDMRVENMIASLEEDRLSAETERQSAESLRRELE 547
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEIN 635
L + E + + + L K ++ + + AK++ + ++ D L + ++ + +
Sbjct: 548 QLREKHAAEQQRFEEQRDKLLLKAQEEARAAVRKAKLEAEQIISDLRKLALEEGASVKEH 607
Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
LI+ A E H+P + S ++ P G++V V SL K +V+E+ G +
Sbjct: 608 KLIEARRKLDEASPELHKPKPAANRS-GKSAKIGP--GDEVRVYSLNQK-GSVIELTGSE 663
Query: 696 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 755
LVQ G M+++V +++ + K AA KQQ+ +Q+ S + +E
Sbjct: 664 --ALVQLGIMKMKVSLDDLELL---KSTEAAA------KQQQPKQAASLKRTRDE----- 707
Query: 756 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 813
++ LDLRG ++EA + D L A + +IHG GTGV++ + + LR H
Sbjct: 708 ---SAAMELDLRGASLDEALIEADRFLDEAFLAGFGRVHLIHGKGTGVLRNGIQDFLRRH 764
Query: 814 PRVAKYE--QESPMNYGCTVA 832
V Y Q G TVA
Sbjct: 765 KHVKNYRIGQYGEGGTGVTVA 785
>gi|218288876|ref|ZP_03493127.1| MutS2 family protein [Alicyclobacillus acidocaldarius LAA1]
gi|218240965|gb|EED08142.1| MutS2 family protein [Alicyclobacillus acidocaldarius LAA1]
Length = 776
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 252/839 (30%), Positives = 409/839 (48%), Gaps = 108/839 (12%)
Query: 9 AQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
A +PF + + +L A + + + IE + ++ A G +S E +
Sbjct: 33 AMVPFAERADAEAELARLDEAVRMLYRVGAPPFAGIESLEEVVERARRGGTISADEANRL 92
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
R + A ++ E A GD + L + L E++I +D +I
Sbjct: 93 ARCI-AGMRAMRQFVERAGEGGD----FPLLASSVAPMADLRRTEQEIRQVVDEDGQVI- 146
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS L +R E++R + S+L ++ QA + +P+I R C+ ++ HK
Sbjct: 147 DHASPTLLRLRDEKRRREGEIRSVLDRLLRT--QAKYLQEPVIAMRGEHYCLPVRVEHKS 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ +VSSSG+T F+EP+ VE + L E E +L L A +A+ +
Sbjct: 205 QIP-GMVRDVSSSGSTVFIEPRAIVELSERVRELEVLEEREVERLLYELAAAVAQVADDF 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++ E+D FA+A +A+ +DG P L+ D + G +HP
Sbjct: 264 LRNLNVAAEMDFVFAKATYARRVDGKRPRLT-------DGVWRLHGARHP---------- 306
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
L D VPID+++ R+++ITGPNTGGKT ++
Sbjct: 307 --------KLDRDA------------------VPIDVELGERFRLLIITGPNTGGKTVTL 340
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM +GL+LP K + + + DIGD QS+EQNLSTFS H+ RI+D+LE
Sbjct: 341 KTIGLLTLMGMSGLFLPTKRESEIGFCRHVFVDIGDEQSIEQNLSTFSSHMRRIIDMLER 400
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V+ +SLVL+DE+G+GTDP+EG ALA +IL +L V TTHYA+L ++ EN
Sbjct: 401 VTEDSLVLLDELGAGTDPAEGSALAIAILDHLTSVGARVVATTHYAELKGYAFRNPAAEN 460
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNAL IA+ +G ++I++RA+ V +S
Sbjct: 461 ASMEFDVETLRPTYRLLMGVPGRSNALAIAERLGMPKEILERARSHVA----------ES 510
Query: 549 ELY-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA-------HLKAKE 600
+++ + L+ KLE+ +R A + E RE D+ DL R+ A ++ +
Sbjct: 511 DIHVEDLIG---KLEAASREAELMRDEAERALREARDKEADLARQKAAWEASKDSMREQA 567
Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 660
++ ++ + A+ + D V+++ + LRD +A + + L++ + +EA P + +
Sbjct: 568 AREAREVIERARREADAVIREIRS-LRDRAAVKDHELVE-----LRKRLEAAEPGEKRAA 621
Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
+ + G++V V SLG K VVEV D +VQ G MR++V ++ + ++
Sbjct: 622 PRRRAQAEV-RPGQRVRVLSLGQK-GDVVEVAQDGRAAVVQLGAMRMKVDARDLEVVGDA 679
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ AA RL G A + + LD+RG V++A ++D
Sbjct: 680 Q-PAAAPSVTRL---------GGA-------------KDVRMELDVRGETVDDAISRIDK 716
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP--MNYGCTVAYIK 835
L A S + +IHG GTG ++ + LR HP V E P G TV +++
Sbjct: 717 YLDDAVVAGISRVVIIHGKGTGALRNAIRRYLREHPHVKSSEPAGPGEGGDGATVVHVR 775
>gi|374322955|ref|YP_005076084.1| MutS2 protein [Paenibacillus terrae HPL-003]
gi|357201964|gb|AET59861.1| MutS2 protein [Paenibacillus terrae HPL-003]
Length = 789
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 256/822 (31%), Positives = 396/822 (48%), Gaps = 109/822 (13%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE +KLL T A A ++ P + + DI + A G LSP E+ +R T++A
Sbjct: 40 LEHIKKLLKGTDEAYAADRLKGVP-SFNGVVDIIPAVKRARIGGTLSPQELLGIRTTVQA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
V + SL +P+ LL L+E LE I CID + LD A
Sbjct: 99 ARRVQVYVA--------SLHEENPVETLLYWSEQLSEQRGLENSIKGCIDENAEV-LDSA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
S +L IR E + R E LDS+++ +++ Q LIT R R + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + S SGAT F+EP+ V NN E E IL LTA +A+
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ Y +D + +D FA+A A+ M P+++ + ++ +HPL+
Sbjct: 264 MLLYDVDVLGTLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
PL+ VPID+++ +++TGPNTGGKT
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL SLM+ +GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ ++ +SLVL+DE+G+GTDP+EG ALA SIL+++ V TTHY++L +
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHMHALGCRMVATTHYSELKAYAYERKGI 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NA+ EF + TL PTYR+L G G SNA IA+ +G +I+ A+ V + R
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEV-----TEEDQR 517
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ SL + R E + A L E+ +L ++E + L+ + L K + +
Sbjct: 518 VEHMIASLEQNRLTAEQEREKAEQLRGEMEELRTRHQNELEKLEAQRERLLEKAADEARS 577
Query: 607 ELNFAKVQIDTVVQDFEN--QLRDASADEINSL-----IKESESAIAAIVEAHRPDDDFS 659
++ A+ + + ++ D Q AS E + + E+E RP
Sbjct: 578 LVDKARSEAEIIIADLRKLAQEEGASVKEHRLIAARKELDEAEPKQRKKSAVKRP----- 632
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+ T T S G++V V SL K VVE+ G + V VQ G M+++V +++ +
Sbjct: 633 -AATRTRSIVA--GDEVSVHSLNKK-GHVVELSGSKEAV-VQLGIMKMKVSLDDLELL-- 685
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
+ A APR +K +G + ++ +N LDLRG VEEA ++D
Sbjct: 686 ---QPAQTTAPRAQKP----VTGIKRTRDDNV---------RNELDLRGANVEEALMEVD 729
Query: 780 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ A + + +IHG GTGV++ + E LR H V Y
Sbjct: 730 RFMDEAFLANLGQVHIIHGKGTGVLRTGIQEYLRKHKHVKSY 771
>gi|357011634|ref|ZP_09076633.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus elgii B69]
Length = 795
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 245/803 (30%), Positives = 399/803 (49%), Gaps = 93/803 (11%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS-PLL-E 101
I DI ++ A G +L+P E+ + T + + + L EA D YS PLL +
Sbjct: 75 IRDIRAAVHRARIGGMLNPVELLDIAMTSQGGRRLGRFL-EATNED------YSIPLLLD 127
Query: 102 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVA 157
LL+ ELEE+I C+D + +D AS +L IR E + + E L+ +++ +
Sbjct: 128 LLEPMTDHKELEERIRGCVDENAQV-MDTASTELLKIRQELRSSESKARERLEQMVRTPS 186
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
Q + L+T R R + +K ++ G+ + S+SGAT F+EP+ V+ NN
Sbjct: 187 IQKM----LQDNLVTIRGDRYVIPVKQEYRGHF-GGMIHDQSASGATLFIEPEAVVQMNN 241
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E AE IL +L+A +A S + ++ + E+D FA+AG A+ M P+
Sbjct: 242 RVRELKLKEEAEVEKILRMLSALVADSADTLLVNVESLTELDFIFAKAGVAREMKATLPL 301
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
L+ + + +HPL+ +
Sbjct: 302 LNDRGFIKLKRG------RHPLIPAEKV-------------------------------- 323
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VP+D+++ +++TGPNTGGKT S+KT+GL SLM+ AGL++PA+ +L FD
Sbjct: 324 ---VPLDVELGNRYSTIIVTGPNTGGKTVSLKTIGLLSLMAMAGLFVPAEEGSQLCVFDA 380
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
I ADIGD QS+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA SIL
Sbjct: 381 IFADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISIL 440
Query: 458 QYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
+++ R+G +V TTHY++L NA+ EF ++TLRPTYR+L G G SNA
Sbjct: 441 EHMH-RMGCRIVATTHYSELKAYAFDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAFA 499
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
IA+ +G + II A+ V + R + +L E R + E++ +A E+
Sbjct: 500 IAERLGLAKTIIDHARGQV-----GEEDQRVESMIATLEENRLQAEAERESAERNRREVE 554
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
L ++ E + + + L + ++ Q+ + A+ + D ++ + R+ + +
Sbjct: 555 TLREQLAAERRRFEEQKDKLFERAEREAQEAVAKARREADEIITELRRIQREEAGGVKDH 614
Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 696
+ E + + R P G++V V +LG + VVE+ + +
Sbjct: 615 KLSELKRRMNDAAPELRSKSKAGTPRKKADRIGP--GDEVLVTNLGQR-GHVVELVSETE 671
Query: 697 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 756
V VQ G ++++V K ++ + ++ +A P QQ+ A SS + R
Sbjct: 672 -VTVQLGILKMKVNKADLELL----KQASAQKKP----QQQ------ATSSLKRT----R 712
Query: 757 VQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
+ +K LDLRG VEEA ++D L + + +F+IHG GTGV++ + E LR H
Sbjct: 713 DENAKMELDLRGANVEEAIIEVDRFLDESYLANFGQVFIIHGKGTGVLRTGIQEFLRKHK 772
Query: 815 RVAKYEQES--PMNYGCTVAYIK 835
V + + G TVA +K
Sbjct: 773 HVKSFRMGAYNEGGAGVTVAELK 795
>gi|375084730|ref|ZP_09731589.1| MutS2 family protein [Megamonas funiformis YIT 11815]
gi|374567865|gb|EHR39064.1| MutS2 family protein [Megamonas funiformis YIT 11815]
Length = 789
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 242/815 (29%), Positives = 394/815 (48%), Gaps = 109/815 (13%)
Query: 24 LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
L+ T A ++ S I DI +L G ++ + + + T+ A+ N+ KK
Sbjct: 47 LSHTQEASNILISSEPPFGGIHDIRSLLKKTSLGLVIEINSLLDILNTMYAMRNL-KKFF 105
Query: 84 EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE-- 141
+ E+D + ++ +E+L +LE +I +D + + D AS +L IR E
Sbjct: 106 KELEIDSPQFKEWAKSIEIL------GQLEREIDNIVD-EHGSMRDSASVELMRIRREIK 158
Query: 142 --RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
++R NLD +LK Q + I +T R R + IK ++ P G+ + S
Sbjct: 159 SSQRRIKTNLDGILKNPDYQKYFQDNI----VTIRDERYVIPIKQEYRQQFP-GVVHDQS 213
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
SSG+T F+EP V+ NN +L E E IL +++ +IA++ + + + + ++D
Sbjct: 214 SSGSTLFIEPMSIVDLNNDIKQLVIDEKREIERILKVISEKIARNADSLLHNCEIMAQLD 273
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
AFA+A A+ M P ++ + +N+ +HPLL
Sbjct: 274 FAFAKAKLARKMHATMP------EINDEGIVNLAKARHPLL------------------- 308
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
D VPIDI++ R ++ITGPNTGGKT SMKTLGL LM++
Sbjct: 309 ----------------NKDNVVPIDIRLGEGYRTLLITGPNTGGKTVSMKTLGLLVLMTQ 352
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
+GL++P ++ ++ F + ADIGD QS+EQ+LSTFS H+ IV+IL + + L+L+DE
Sbjct: 353 SGLFIPVQSGSKISIFQNVYADIGDEQSIEQSLSTFSAHMRNIVNILNNIEHDDLLLLDE 412
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+GSGTDP EG ALA SIL+ L D V TTHY +L ENA EF +++LR
Sbjct: 413 VGSGTDPEEGAALAMSILERLMDIGACTVATTHYNELKTFAYSKEGIENACVEFDIKSLR 472
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEER 558
PTYR+L G+ G SNA I+K +G +I RAQ+L+ + H + E + +L E+
Sbjct: 473 PTYRLLIGTPGASNAFAISKRLGLSDTLILRAQQLI------KADHAQFENVLNTLENEK 526
Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
E + A I L +++ D +++ ++ K +Q L + + + +
Sbjct: 527 LMYEQKNADIAERQQRIEKLEKQLADMKQEMAKKKEQTLRKTKEQCASLLRRTRRESEEI 586
Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHV 678
+++ + Q D +K+ + I A R D VS+ N P GE V +
Sbjct: 587 IKELKAQFNDQG-------MKKRQETIDAARHKLRGRLD-KVSQQNDDPNKP--GEAVDI 636
Query: 679 KSL--GD--------KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
K++ GD + T+ ++ G + T VQ G +++ VK + + ++ + P
Sbjct: 637 KTIAVGDIVYVNKLRQKGTITDISGKELT--VQLGSLKMNVKAKDCSFVSHAVKVKETAP 694
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALAC 784
+ + AG N A +V +D+RG+ V+EA S LD A+
Sbjct: 695 SKK------------AGGFNMLA----KVSQISTEVDIRGLMVDEAIEVVSKYLDDAVIS 738
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
SR + +IHG GTG +++ + E L+NH V Y
Sbjct: 739 GLSR--VLIIHGKGTGALRKGIQEYLKNHRNVLSY 771
>gi|386726811|ref|YP_006193137.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus K02]
gi|384093936|gb|AFH65372.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus K02]
Length = 775
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 241/807 (29%), Positives = 402/807 (49%), Gaps = 101/807 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I DI L+ A G +L+P+E+ + T + + + L +S+ P+ L+
Sbjct: 55 IRDIRPALHRARIGGMLTPAELLDIALTSQGGRRLQRFL--------ESINEDYPVPLLV 106
Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
++ +T+ LE++I CID ++ D AS +L IR+E + + E L+ +++
Sbjct: 107 ESTEPMTDHKALEDRIRQCIDENAHVV-DSASPELARIRSELRGSESKARERLEQMVRTP 165
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + L+T R R + +K ++ G+ + S+SGAT F+EP+ V+ N
Sbjct: 166 SIQKM----LQDNLVTIRNDRYVIPVKQEYRSHF-GGMIHDQSASGATLFIEPEAVVQMN 220
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N L E AE IL +L+A +A++ + ++ + E+D FA+AG A+ M P
Sbjct: 221 NRVRELKLKEEAEVEKILRMLSALVAEAADLLVVNVEILGELDFIFAKAGLARTMKATLP 280
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+L+ + + +HPL+ AS N
Sbjct: 281 LLNDRGFIKLKRG------RHPLI----------ASENV--------------------- 303
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP+D+++ + +++TGPNTGGKT S+KT+GL SLM+ +G+++PA+ +L FD
Sbjct: 304 ----VPLDVELGGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFD 359
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA SI
Sbjct: 360 AIYADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISI 419
Query: 457 LQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
L Y+ R+G +V TTHY +L NA+ EF ++TLRPTYR+L G G SNA
Sbjct: 420 LDYMH-RMGCRIVATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAF 478
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
IA+ +G R II+ A+ V ++ R + +L + + E++ TA L E+
Sbjct: 479 AIAERLGLSRSIIENARGQV-----GEEEQRVESMIATLEQNTIQAEAERVTAQELRREV 533
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
L ++ E + + L K ++ ++ + A+ + + V+ + R+ + +
Sbjct: 534 ETLREKLNAERHRFEEQRDKLLEKAEREGREAVAKARREAEEVIAELRRLQREEAGGVKD 593
Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
+ E + + R + + + P G++V V +LG + V V +
Sbjct: 594 HKLSELKKKLNDAAPELRSKQVSQLPKKKPETIGP--GDEVLVTNLGQRGHVVDVVNAQE 651
Query: 696 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 755
T VQ G ++++V K ++ + ++ +K A P A SS +
Sbjct: 652 YT--VQLGILKMKVNKADLELVKHAPQKKAEPP--------------KATSSLKRT---- 691
Query: 756 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 813
R + +K LDLRG VEEA ++D L + + +++IHG GTGV++ + E LR H
Sbjct: 692 RDENAKMELDLRGANVEEAMIEVDRFLDESYLANFGQVYIIHGKGTGVLRAGIQEYLRKH 751
Query: 814 PRVAKYEQESPMNY-----GCTVAYIK 835
V Y NY G TVA +K
Sbjct: 752 KHVKSYRMG---NYNEGGAGVTVAELK 775
>gi|379724074|ref|YP_005316205.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus 3016]
gi|378572746|gb|AFC33056.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus 3016]
Length = 794
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 241/807 (29%), Positives = 401/807 (49%), Gaps = 101/807 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I DI L+ A G +L+P+E+ + T + + + L +S+ P+ L+
Sbjct: 74 IRDIRPALHRARIGGMLNPAELLDIALTSQGGRRLQRFL--------ESINEDYPVPLLV 125
Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
++ +T+ LE++I CID ++ D AS +L IR+E + + E L+ +++
Sbjct: 126 ESTEPMTDHKALEDRIRQCIDENAHVV-DSASPELARIRSELRGSESKARERLEQMVRTP 184
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + L+T R R + +K ++ G+ + S+SGAT F+EP+ V+ N
Sbjct: 185 SIQKM----LQDNLVTIRNDRYVIPVKQEYRSHF-GGMIHDQSASGATLFIEPEAVVQMN 239
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N L E AE IL +L+A +A++ + ++ + E+D FA+AG A+ M P
Sbjct: 240 NRVRELKLKEEAEVEKILRMLSALVAEAADLLVVNVEILGELDFIFAKAGLARTMKATLP 299
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+L+ + + +HPL+ AS N
Sbjct: 300 LLNDRGFIKLKRG------RHPLI----------ASENV--------------------- 322
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP+D+++ + +++TGPNTGGKT S+KT+GL SLM+ +G+++PA+ +L FD
Sbjct: 323 ----VPLDVELGGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFD 378
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA SI
Sbjct: 379 AIYADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISI 438
Query: 457 LQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
L Y+ R+G +V TTHY +L NA+ EF ++TLRPTYR+L G G SNA
Sbjct: 439 LDYMH-RMGCRIVATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAF 497
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
IA+ +G R II+ A+ V ++ R + +L + + E++ TA L E+
Sbjct: 498 AIAERLGLSRSIIENARGQV-----GEEEQRVESMIATLEQNTIQAEAERATAQELRREV 552
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
L ++ E + + L K ++ ++ + A+ + + V+ + R+ + +
Sbjct: 553 ETLREKLNAERHRFEEQRDKLLEKAEREGREAVAKARREAEEVIAELRRLQREEAGGVKD 612
Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
+ E + + R + + + P G++V V +LG + V V +
Sbjct: 613 HKLSELKKKLNDAAPELRSKQVSQLPKKKPETIGP--GDEVLVTNLGQRGHVVDVVNAQE 670
Query: 696 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 755
T VQ G ++++V K ++ + + +K A P A SS +
Sbjct: 671 YT--VQLGILKMKVNKADLELVKQAPQKKAEPP--------------KATSSLKRT---- 710
Query: 756 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 813
R + +K LDLRG VEEA ++D L + + +++IHG GTGV++ + E LR H
Sbjct: 711 RDENAKMELDLRGANVEEAMIEVDRFLDESYLANFGQVYIIHGKGTGVLRAGIQEYLRKH 770
Query: 814 PRVAKYEQESPMNY-----GCTVAYIK 835
V Y NY G TVA +K
Sbjct: 771 KHVKSYRMG---NYNEGGAGVTVAELK 794
>gi|160933325|ref|ZP_02080713.1| hypothetical protein CLOLEP_02170 [Clostridium leptum DSM 753]
gi|156867202|gb|EDO60574.1| MutS2 family protein [Clostridium leptum DSM 753]
Length = 791
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 262/802 (32%), Positives = 385/802 (48%), Gaps = 110/802 (13%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLE 101
++++A L A +G LS E+ V LR + + W+K +E E D R+ E
Sbjct: 71 LQNVANSLRRAQAGASLSMGELLKVAEVLRVMRGLIQWRKRSEGLETSID--WRF----E 124
Query: 102 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVA 157
L +L EEKI I + + D AS+ L IR A R E LD ++ A
Sbjct: 125 ALPPNKYL---EEKIASSILSEEEMA-DGASQALGDIRRKINAASLRVREKLDHMIHSPA 180
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
Q + + +P++T R R V +KA + +P G+ + S SGAT F+EP VE NN
Sbjct: 181 YQKY----LQEPIVTLRGGRFVVPVKAECRGEVP-GLVHDTSGSGATVFVEPMAVVEANN 235
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L + E AE IL L+ E I + +E+D+ FA+A A M P
Sbjct: 236 DIKVLKSKEEAEIERILYELSQEAGGFADSIIEGYNAAIELDILFAKAKLAYRMKATLPE 295
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
++ Q + + +HPL+ +P K +
Sbjct: 296 VNDQGKIYLKKA------RHPLI---------------DP----------------KAV- 317
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
V DI++ + +VITGPNTGGKT S+KT+GL +LM+ GL LPA + + F
Sbjct: 318 ---VATDIELGLQFDTLVITGPNTGGKTVSLKTIGLLTLMAMCGLLLPASDGSMVSVFSQ 374
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE--SLVLIDEIGSGTDPSEGVALATS 455
+LADIGD QS+EQ+LSTFS H++ ++ IL V RE SLVLIDE+G+GTDP EG ALA +
Sbjct: 375 VLADIGDEQSIEQSLSTFSAHMTNMIHILSSVEREGISLVLIDELGAGTDPVEGAALAMA 434
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL+ LR TTHYA+L + EN EF + TLRPTYR+L G G SNA
Sbjct: 435 ILETLRASQVRIAATTHYAELKAYALQTAGVENGCCEFDVATLRPTYRLLIGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I++ +G D+ I+ RA++LV + R ++ ++L E R+ LE + + A L A+
Sbjct: 495 AISERLGMDQHIVARARELV-----SAENSRFEDVVRNLEESRQSLEQERKEAQELSAQA 549
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR------DA 629
+E E A+ L RR + + ++ + + L + D + LR DA
Sbjct: 550 QQYRQEAEQRAEKL-RRDSEAELEKARVEARNLVARARAQAQALMDELDDLRKKNREIDA 608
Query: 630 SAD-EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 688
A + + I+E E+ + E + +D+ + Q G+ V + L DK A V
Sbjct: 609 QAKARLKAGIREMENTADPVKE--KQGEDYRLPR------ALQAGDSVLIYDL-DKKAVV 659
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E VLVQ G ++ RV N+R + K++ P R + + R S
Sbjct: 660 LEPADSSGNVLVQAGIIKTRVPVGNLRLL---KQEKVQKPKGRGVRTVKTRASAPV---- 712
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERV 806
+ +DLRGM VEE +LD I A ++L VIHG GTGV+++ V
Sbjct: 713 ------------QQEVDLRGMTVEEGIMELDNFIDSALLSGITLLTVIHGKGTGVLRKAV 760
Query: 807 LEILRNHPRVAKYEQESPMNYG 828
E L+ HP V Y NYG
Sbjct: 761 QERLKRHPSVKSYRLG---NYG 779
>gi|295696872|ref|YP_003590110.1| MutS2 family protein [Kyrpidia tusciae DSM 2912]
gi|295412474|gb|ADG06966.1| MutS2 family protein [Kyrpidia tusciae DSM 2912]
Length = 783
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 256/832 (30%), Positives = 384/832 (46%), Gaps = 109/832 (13%)
Query: 9 AQIPFGKSL----------EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSG 57
AQ GK+L EE + +T A A + + + L D+ + A G
Sbjct: 22 AQTDMGKTLALELLPSSDEEEVRSWCRETDEAQAWDRLAGGVSLQGATDVTESVRRAARG 81
Query: 58 QLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
+LSP ++ A +R V + L + S R L L L LE+ I
Sbjct: 82 GVLSPEQLYATAELMRVGRRVQRSLEQV-----QSKARTPQLQALASGIPELPALEKAIR 136
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLIT 172
+ + ILD AS +L +R RKR + + LD L++ Q + + +PL+T
Sbjct: 137 ESVG-EDGAILDGASSELAALR-RRKRALADRIRGALDELIRNPNTQKY----LQEPLVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R CV ++ K GI + S+SG T+F+EP V N L E E
Sbjct: 191 VRDGRYCVPVRVEFKNSF-RGIVHDQSASGQTWFIEPAAIVPLGNELRGLEAQEEREIER 249
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL L+A + + E + ++ + +D A A++ AQ MD V P H + +
Sbjct: 250 ILVRLSALVGQEESGLSKAVECLGRLDFALAKSRLAQQMDAVSP------HFVGGGKLRL 303
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+HPL+ + VP+D+ + E
Sbjct: 304 RRCRHPLIPKERV-----------------------------------VPVDVLIGDEYH 328
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
++ITGPNTGGKT +KT GL + M++AGL++PA L F+ I ADIGD QS+EQ+L
Sbjct: 329 ALIITGPNTGGKTVVLKTAGLLTCMAQAGLFIPAAEGSELSVFERIFADIGDEQSIEQSL 388
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
STFSGH+ I++IL+ V+ SLVL+DEIG+GTDP+EG ALA +ILQ+ DR + TTH
Sbjct: 389 STFSGHMKHIIEILDQVNERSLVLLDEIGAGTDPAEGAALAEAILQFFVDRGIRTIATTH 448
Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
Y DL NA+ EF ETLRPTYR+L G G SNAL +A +G ++I+ RA
Sbjct: 449 YGDLKAFAYTTPGVMNASVEFDPETLRPTYRLLIGVPGRSNALAVAARLGLGQEILDRA- 507
Query: 533 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 592
R R R ++ + L R + +A A E L ++ E E + +
Sbjct: 508 ----RHRLGADDVRVEDMIRQLETARNQAREEADRARLDREEASRLRQQWESEVRRWEAE 563
Query: 593 AAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH 652
A + T Q ++ +Q + V+D +LR S ++ +SL + + + ++
Sbjct: 564 A----DQRTAQAEERARRIVLQAEREVKDVLEELRRLSREDRSSLKEHQFTELRQRLDRV 619
Query: 653 RPDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
+P + S T TP G+ V V S G K TV+E+ G + LVQ G ++ RV
Sbjct: 620 KPAFRYGRRVPSSTGEDFGTPGPGDAVEVVSFGQK-GTVLEIQGKE--ALVQIGALKTRV 676
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
P+ +++ A PA + + G+ G E LDLRG
Sbjct: 677 ------PVAALRKQKAPAPAAPVSVAV---RRGADGVGME--------------LDLRGK 713
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
VEEA ++D L A + + +IHG GTG ++ V LR+HP V +
Sbjct: 714 TVEEAIPEIDQYLDRAVLAGLATVHLIHGKGTGALRSGVQTYLRSHPHVRSF 765
>gi|337751036|ref|YP_004645198.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus KNP414]
gi|336302225|gb|AEI45328.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus mucilaginosus KNP414]
Length = 794
Score = 299 bits (766), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 241/807 (29%), Positives = 401/807 (49%), Gaps = 101/807 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I DI L+ A G +L+P+E+ + T + + + L +S+ P+ L+
Sbjct: 74 IRDIRPALHRARIGGMLNPAELLDIALTSQGGRRLQRFL--------ESINEDYPVPLLV 125
Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
++ +T+ LE++I CID ++ D AS +L IR+E + + E L+ +++
Sbjct: 126 ESTEPMTDHKALEDRIRQCIDENAHVV-DSASPELARIRSELRGSESKARERLEQMVRTP 184
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + L+T R R + +K ++ G+ + S+SGAT F+EP+ V+ N
Sbjct: 185 SIQKM----LQDNLVTIRNDRYVIPVKQEYRSHF-GGMIHDQSASGATLFIEPEAVVQMN 239
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N L E AE IL +L+A +A++ + ++ + E+D FA+AG A+ M P
Sbjct: 240 NRVRELKLKEEAEVEKILRMLSALVAEAADLLVVNVEILGELDFIFAKAGLARTMKATLP 299
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+L+ + + +HPL+ AS N
Sbjct: 300 LLNDRGFIKLKRG------RHPLI----------ASENV--------------------- 322
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP+D+++ + +++TGPNTGGKT S+KT+GL SLM+ +G+++PA+ +L FD
Sbjct: 323 ----VPLDVELGGKYSSIIVTGPNTGGKTVSLKTIGLLSLMAMSGMFVPAEEGSQLCVFD 378
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA SI
Sbjct: 379 AIYADIGDEQSIEQNLSTFSSHMTNIIRILREMTPKSLVLLDELGAGTDPAEGSALAISI 438
Query: 457 LQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
L Y+ R+G +V TTHY +L NA+ EF ++TLRPTYR+L G G SNA
Sbjct: 439 LDYMH-RMGCRIVATTHYTELKAYAYDRQGVINASMEFDVQTLRPTYRLLVGVPGRSNAF 497
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
IA+ +G R II+ A+ V ++ R + +L + + E++ TA L E+
Sbjct: 498 AIAERLGLSRSIIENARGQV-----GEEEQRVESMIATLEQNTIQAEAERATAQELRREV 552
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
L ++ E + + L K ++ ++ + A+ + + V+ + R+ + +
Sbjct: 553 ETLREKLNAERHRFEEQRDKLLEKAEREGREAVAKARREAEEVIAELRRLQREEAGGVKD 612
Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
+ E + + R + + + P G++V V +LG + V V +
Sbjct: 613 HKLSELKKKLNDAAPELRSKQVSQLPKKKPETIGP--GDEVLVTNLGQRGHIVDVVNAQE 670
Query: 696 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 755
T VQ G ++++V K ++ + + +K A P A SS +
Sbjct: 671 YT--VQLGILKMKVNKADLELVKQAPQKKAEPP--------------KATSSLKRT---- 710
Query: 756 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 813
R + +K LDLRG VEEA ++D L + + +++IHG GTGV++ + E LR H
Sbjct: 711 RDENAKMELDLRGANVEEAMIEVDRFLDESYLANFGQVYIIHGKGTGVLRAGIQEYLRKH 770
Query: 814 PRVAKYEQESPMNY-----GCTVAYIK 835
V Y NY G TVA +K
Sbjct: 771 KHVKSYRMG---NYNEGGAGVTVAELK 794
>gi|169831532|ref|YP_001717514.1| MutS2 family protein [Candidatus Desulforudis audaxviator MP104C]
gi|169638376|gb|ACA59882.1| MutS2 family protein [Candidatus Desulforudis audaxviator MP104C]
Length = 784
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 251/827 (30%), Positives = 398/827 (48%), Gaps = 124/827 (14%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
L+E ++L +T +++ +P D D+ + A GQ+L + + +TL A
Sbjct: 42 GLDEVRRLQAETDEGYNILRLEPNADFGGWHDVREPVRRAARGQVLDGGPLFQIGQTLAA 101
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ K L D RY L L ELE+++ I + D AS
Sbjct: 102 IRTQKKFLM-------DRRDRYPLLAGLAGTMPVFPELEKRLVESI-LPGGEVADGASAR 153
Query: 135 LELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L +R A R + E L+ L++ +A Q + + +P+IT R R V +K ++ +
Sbjct: 154 LADLRRRLQAGRLQVREQLERLVRSLAQQKY----LQEPIITIREGRYVVPVKIEYRNQV 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P G+ + S+SGAT F+EP V+ NN RL +E E IL+ L+ +A++ EI
Sbjct: 210 P-GLVHDQSASGATLFIEPMAVVDKNNELRRLEAAEKQEILKILTELSTAVAQAADEILP 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+D++ D A+A ++ M V P+L + + F + +HPL+ G+
Sbjct: 269 AVDQLGHFDFVLAKARLSRQMAAVPPLLEDGAFLEFSRA------RHPLIRGNV------ 316
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
VPID +V + ++V+TGPNTGGKT ++KT
Sbjct: 317 ------------------------------VPIDGRVGRDFDLLVLTGPNTGGKTVALKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL LM++AGL++PA + + FD + ADIGD QS+E +LSTFS H++ +VDI+ V
Sbjct: 347 IGLLVLMAQAGLHVPASSCA-VGLFDRVFADIGDEQSIENSLSTFSSHMANLVDIIGQVG 405
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVLIDE+G+GTDP+EG ALA +IL L R VVTTHY +L R ENA+
Sbjct: 406 AKSLVLIDELGTGTDPTEGAALAQAILNELHRRGTRGVVTTHYGELKEFATGRDRVENAS 465
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF L+TL PT+R++ G G S A IA +G I+ RA++ L PE++Q +EL
Sbjct: 466 VEFDLDTLEPTFRLVTGRPGRSYAFEIALRLGMPESIVSRAREF---LAPEQRQ--TAEL 520
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDE-AKDLDRRAAHLKAKETQQVQQELN 609
+ L E R++ E Q A E L + E E A LD++ A L+ + ++ Q+ +
Sbjct: 521 LRQLEESRQEAERQREEARKEAREASILKQRYEAELASLLDKKTA-LRERAAREAQELIR 579
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET------ 663
+ + + +V++ Q+ + E I+++ + I + A PD +V ET
Sbjct: 580 QVRREGEEIVRELRRQINAGTNREKEQAIQQARARIDEL-GAGLPDP--AVPETVEGEPE 636
Query: 664 ----NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR---P 716
+ F P+F +Q V P D V VQ G ++V + +R P
Sbjct: 637 RLDGGEAVFIPRFSQQ-----------GVTLGPSRDGEVQVQVGSVKVNLPLAEVRRMIP 685
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
P+S NA ++K ++D + LDLRG+ EEA
Sbjct: 686 APHSTAPNAGTVV--VQKTRDD---------------------VRTELDLRGLHAEEALS 722
Query: 777 Q----LDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ LD A+ R+ ++IHG+GTGV++ V L+ R+ +
Sbjct: 723 ELEKYLDAAILAGLQRA--YIIHGLGTGVLRAAVQNHLKGDGRIRSF 767
>gi|375307738|ref|ZP_09773025.1| MutS2 protein [Paenibacillus sp. Aloe-11]
gi|375080069|gb|EHS58290.1| MutS2 protein [Paenibacillus sp. Aloe-11]
Length = 788
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 256/821 (31%), Positives = 400/821 (48%), Gaps = 108/821 (13%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE +K+L T A A ++ P + + DI + A G L+P E+ +R T++A
Sbjct: 40 LEHIKKMLKGTDEAYAADRLKGVP-SFNGVVDITPAVKRARIGGTLNPQELLGIRTTVQA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ + SL +P+ LL L+E LE I CID + LD A
Sbjct: 99 ARRIQVYVA--------SLHEENPVETLLFWSEQLSEQRSLENSIKGCIDENAEV-LDSA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
S +L IR E + R E LDS+++ +++ Q LIT R R + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + S SGAT F+EP+ V NN E E IL LTA +A+
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ Y +D + +D FA+A A+ M P+++ + ++ +HPL+
Sbjct: 264 MLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
PL+ VPID+++ +++TGPNTGGKT
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL SLM+ +GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ ++ +SLVL+DE+G+GTDP+EG ALA SIL+++ V TTHY++L +
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHMHAMGCRMVATTHYSELKAYAYERKGI 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NA+ EF + TL PTYR+L G G SNA IA+ +G +I+ A+ V + R
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPSRILDYARGEV-----TEEDQR 517
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ SL + R E + A L E+ L + E L+ + + K + +
Sbjct: 518 VEHMIASLEQNRLTAEQEREKAEQLRREMEALRSRHQTELDKLESQRDRMLEKAEDEARV 577
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE------AHRPDDDFSV 660
++ A+ + + ++ D LR + +E S +KE + IAA E R +
Sbjct: 578 LVDKARSEAEKIISD----LRKLAQEEGAS-VKEHK-LIAARKELDEAEPKQRKKNTVKR 631
Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
+ T T S G++V V SL K VVE+ G + V VQ G M+++V +++ +
Sbjct: 632 AATRTRSIMA--GDEVTVHSLNKK-GHVVELSGSKEAV-VQLGIMKMKVSLDDLELL--- 684
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ A PAPR++K +G + ++ +N LDLRG VEEA ++D
Sbjct: 685 --QPAQTPAPRVQKP----VTGVKRTRDDNV---------RNELDLRGANVEEALIEVDR 729
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ A + + +IHG GTGV++ + E LR H V Y
Sbjct: 730 FMDEAFLANLGQVHIIHGKGTGVLRTGIQEYLRKHKHVKSY 770
>gi|121534235|ref|ZP_01666060.1| MutS2 family protein [Thermosinus carboxydivorans Nor1]
gi|121307338|gb|EAX48255.1| MutS2 family protein [Thermosinus carboxydivorans Nor1]
Length = 789
Score = 299 bits (765), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 253/815 (31%), Positives = 391/815 (47%), Gaps = 99/815 (12%)
Query: 33 MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDS 92
++ S + DI IL G +L P E+ A+ TL A + + LTEA
Sbjct: 62 LLASSHVPFGGARDIRAILRRLEIGAVLEPEELLAIASTLYAARRLKQFLTEA------- 114
Query: 93 LQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNME 147
+ S LL E L LE I + + I+ D AS +L IR E ++R E
Sbjct: 115 -KPSSVLLTEKAGRITALRNLEAAIESTV-SEQGIVRDEASVELTRIRREIRVAQQRVKE 172
Query: 148 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 207
LD +L Q + + L+T R R + IK H+Y P GI + S+SGAT F+
Sbjct: 173 KLDQILHSAEYQKY----FQEALVTIRGDRYVIPIKQEHRYHFP-GIVHDQSASGATVFI 227
Query: 208 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 267
EP V NN +L +E E IL+ L++++A+ I+ + V +D AFA+A
Sbjct: 228 EPMAVVNLNNDIKQLVAAEKNEVERILAALSSQVARHVDAIRQNSEIVAALDFAFAKAKL 287
Query: 268 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 327
M P+L+ + + + +HPL+ P
Sbjct: 288 GLDMQANMPLLNDKGRIFLRQA------RHPLI----------------P---------- 315
Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
D VPID+++ + +++ITGPNTGGKT ++KT+GL +LM++AGL++PA
Sbjct: 316 ---------RDEVVPIDVRLGEDFSILLITGPNTGGKTVTLKTVGLFALMTQAGLFIPAG 366
Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
+ +P F + ADIGD QS+EQ+LSTFS H++ +V IL VS LVLIDEIG+GTDP
Sbjct: 367 SGSEMPVFRNVFADIGDEQSIEQSLSTFSAHMTNLVKILAKVSAHDLVLIDEIGAGTDPG 426
Query: 448 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 507
EG ALA +IL+YL + TTHY++L ENA+ EF + TLRPTYR+ G
Sbjct: 427 EGAALAMAILEYLHSAGARTIATTHYSELKTFAYSRHGIENASVEFDIHTLRPTYRLQIG 486
Query: 508 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 567
G SNA I++ +G +++I RA++ +++ + + E +++E+ +K + R
Sbjct: 487 IPGSSNAFAISRRLGLPQELIDRARQFLDK------DYAQFEKILAVLEQEKKEYEERRR 540
Query: 568 AASLHAEIMDLYRE--IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
A + R+ ++EA L RR + K ++ + A+ Q + V+ + Q
Sbjct: 541 RAEELEAEVAALRQKLAQEEAALLARR-REIIDKAQEEAMSIVRQARRQAEEVIARLKEQ 599
Query: 626 LRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
AS E I ++ + + E H P+ D + + TP G V+V +L K
Sbjct: 600 FSVASDKERQQAIADARRQLQRQMAELHHPELDAAEKTAPPALLTP--GSTVYVTTLRQK 657
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
+V+ + D +VQ G ++V V P+ + PA G
Sbjct: 658 -GSVLAI--KDGEAVVQLGVLKVNV------PVAACRIVEEMAPAGH----------GHK 698
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
G S + A +VQ+ +D+RGM V EA L+ L A S + VIHG GTG +
Sbjct: 699 GVSVDFA----KVQSVSREIDVRGMTVAEAETVLEKYLDDALLAGLSEVNVIHGKGTGAL 754
Query: 803 KERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
++ V L++HP V + + S G TV +K
Sbjct: 755 RKGVRSYLKDHPHVVETRIGELSEGGDGVTVVKLK 789
>gi|384547383|ref|YP_005736636.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
ED133]
gi|417904179|ref|ZP_12548009.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21269]
gi|298694432|gb|ADI97654.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
ED133]
gi|341848002|gb|EGS89171.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21269]
Length = 782
Score = 299 bits (765), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 402/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ N + E D D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEDV--KYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|431792234|ref|YP_007219139.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430782460|gb|AGA67743.1| DNA mismatch repair protein, MutS family [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 789
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 250/847 (29%), Positives = 402/847 (47%), Gaps = 118/847 (13%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
PF L+ ++ L +T A ++++ PL + ++I +L + G L+P E+ +R
Sbjct: 38 PFA-HLDLVREALEETGEAKSILRVNPLFSVRGAKEIRPLLERCLRGGTLTPDELLQIRD 96
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE-LEEKIGFCI--DCKLLII 127
TL+A V + L E + +P L+ + L + +EE+I CI D + +
Sbjct: 97 TLKAARYVKQSLLEG--------KVETPHLKGIMESVLLPKGIEEEISRCITEDGQ---V 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK----PLITKRRSRMCVGIK 183
D+AS L E +R + L S +++ I + K P+IT+R R V +K
Sbjct: 146 ADQASPLL----TELRRGIGRLQSRIRETLEGIIRNPSYQKILQDPIITQRSERYVVPVK 201
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
++ GI + S+SGAT F+EP V N + E E IL LL+A +
Sbjct: 202 QEYRQAF-QGIVHDQSASGATLFIEPMTVVNLGNELREVILKEQREVQRILLLLSARVEG 260
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
I + + +D A+A ++ M+ PIL+ + +S + +HPLL G
Sbjct: 261 EVEAIAETHEALARVDFILAKAHLSEGMNAGAPILTDKQEISLVQA------RHPLLTGK 314
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
VP+ I++ VV+TGPNTGG
Sbjct: 315 V------------------------------------VPLTIELGTRFDTVVVTGPNTGG 338
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++KTLGL + M++ GL++PA++ R+ F I ADIGD QS+EQ+LSTFSGH+ IV
Sbjct: 339 KTVALKTLGLLAAMAQCGLHIPAESDSRVGVFTQIFADIGDEQSVEQSLSTFSGHMRNIV 398
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
+I+E SL+L+DE+G+GTDP+EG ALA +I+ L +R V TTHY L
Sbjct: 399 EIVEKADERSLILLDEVGAGTDPTEGSALAMAIIAQLHERGSRIVATTHYGALKNFAYNT 458
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
R ENA+ EF ETLRPTYR+L G G SNA IA +G +++ RA+ V ER+
Sbjct: 459 PRVENASVEFDSETLRPTYRLLIGIPGKSNAFYIAGRLGLPEEVLVRARTYV----TERE 514
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
++L ++L + +R+++ + R A I ++++++ L+ L AK Q
Sbjct: 515 MQ-VADLIENLEDTQREIDFEKRRAREERQIIEIESLGLKEKSQKLEDEYQGLMAKAKDQ 573
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ + A+ + + ++ DE+ +KE A+ A + S S
Sbjct: 574 ATEIVREARREAERLI------------DELKLALKEDRKDQQAVDRARQGIRKLS-SRV 620
Query: 664 NTSSFTP-----------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
TS P + G+ V++ L K V+++P +LVQ G +++ V +
Sbjct: 621 GTSDSQPRASEGVNPEDLKLGQMVYMTKLRQK-GQVLKLPNSSGEILVQAGVIKLNVPLS 679
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
I RL K+++ +S + S + + +T + +DLRGM VE
Sbjct: 680 EI----------------RLEKEEKPTRSTRSVISQRKGDM-KKAETLRTEIDLRGMMVE 722
Query: 773 EASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYG 828
EAS +LD L A ++VIHG GTG ++ + E LR H V + Q + G
Sbjct: 723 EASFELDKYLDDAVLTGVGQVYVIHGKGTGALRNGIQEFLRGHHHVKSFRIGQHGEGDLG 782
Query: 829 CTVAYIK 835
TV ++
Sbjct: 783 VTVVELR 789
>gi|386040047|ref|YP_005959001.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
gi|343096085|emb|CCC84294.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
Length = 789
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 257/822 (31%), Positives = 402/822 (48%), Gaps = 109/822 (13%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE +KLL T A A ++ P + + DI + A G LSP E+ +R T++A
Sbjct: 40 LEHIKKLLKGTDEAYAADRLKGVP-SFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ +T SL +P+ LL L+E LE I CID + LD A
Sbjct: 99 ARRIQVYVT--------SLHEENPVETLLYWSEQLSEQRSLENSIKGCIDENAEV-LDSA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
S +L IR E + R E LDS+++ +++ Q LIT R R + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + S SGAT F+EP+ V NN E E IL LTA +A+
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ Y +D + +D FA+A A+ M P+++ + ++ +HPL+
Sbjct: 264 MLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
PL+ VPID+++ +++TGPNTGGKT
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL SLM+ +GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ ++ +SLVL+DE+G+GTDP+EG ALA SIL+++ V TTHY++L +
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHIHALGCRMVATTHYSELKAYAYERKGI 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NA+ EF + TL PTYR+L G G SNA IA+ +G +I+ A+ V + R
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEV-----TEEDQR 517
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ SL + R E + A L E+ L + E LD+ L+++ + +++
Sbjct: 518 VEHMIASLEQNRLTAEQEREKAEQLRKEMEALRTRHQTE---LDK----LESQRDRMLEK 570
Query: 607 ELNFAKVQIDTVVQDFENQLRDAS--ADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
+ A+V +D + E + D A E + +KE + IAA E + T
Sbjct: 571 AEDEARVLVDKARSEAEKIITDLRRLAQEEGASVKEHK-LIAARKELDEAEPKQRKKSTA 629
Query: 665 TSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
S T + G++V V SL K VVE+ G + + VQ G M+++V +++ +
Sbjct: 630 KRSITTRTRSIMAGDEVSVHSLNKK-GHVVELTGSKEAI-VQLGIMKMKVSLDDLELL-- 685
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
+ A APR++K +G + ++ ++ LDLRG VEEA ++D
Sbjct: 686 ---QPAQTTAPRVQKP----VTGVKRTRDDNV---------RSELDLRGANVEEALMEVD 729
Query: 780 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ A + +++IHG GTGV++ + E LR H V Y
Sbjct: 730 RFMDEAFLANLGQVYIIHGKGTGVLRTGIQEYLRKHKHVKSY 771
>gi|323702088|ref|ZP_08113756.1| MutS2 family protein [Desulfotomaculum nigrificans DSM 574]
gi|333923406|ref|YP_004496986.1| MutS2 protein [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323532970|gb|EGB22841.1| MutS2 family protein [Desulfotomaculum nigrificans DSM 574]
gi|333748967|gb|AEF94074.1| MutS2 protein [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 783
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 241/774 (31%), Positives = 384/774 (49%), Gaps = 105/774 (13%)
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
LS E+ AV TL A + K E + RY L EL + +LE+ I
Sbjct: 83 LSAEELLAVGETLAASRRIKKFFAEKS-------SRYPLLNELAEALTIQAQLEKNILRA 135
Query: 120 IDCKLLIILDRASEDLELIRA---ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
I I D + E L++ R + R E ++S+++ Q + + P+IT R
Sbjct: 136 ILPGGEIADDASPELLQIRRGLARAQNRVRERMESIIRSSENQKY----LQDPIITIRND 191
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R V +K ++ +P GI + S+SGAT F+EP AVE NN RL +E E IL
Sbjct: 192 RYVVPVKQEYRNQIP-GIVHDQSASGATLFIEPMAAVEANNEVRRLMVAEQQEIQKILVE 250
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
L+ ++ ++ MD + ++D A+A +++ ++ + P + + V +I+ +
Sbjct: 251 LSNGVSAIAEDLTITMDALGQLDFIMAKARYSRTLNALSPTIIDGARV------DIKKGR 304
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLL + VP I + + R +VI
Sbjct: 305 HPLL------------------------------------GEDAVPATISLGKDFRTLVI 328
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT ++KT+GL +LM+++GL++PA+ + F+ + ADIGD QS+EQ+LSTFS
Sbjct: 329 TGPNTGGKTVTLKTVGLFTLMTQSGLHIPAEAGSEMGIFNQVFADIGDEQSIEQSLSTFS 388
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
H++ IV+IL SLVL+DE+G+GTDP+EG ALA +IL+ L R + TTHY++L
Sbjct: 389 SHMTNIVNILNRADTGSLVLLDELGAGTDPTEGAALARAILEELHGRGACTIATTHYSEL 448
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
ENA+ EF +ETLRPTYR+L G G SNA I+ +G I+QRA++ +
Sbjct: 449 KNYAYTTPGVENASVEFDVETLRPTYRLLIGRPGRSNAFEISARLGLQPAIVQRARQFL- 507
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLH---AEIMDLYREIEDEAKDLDRRA 593
+Q + ++L L + ++ E AA L EI + YR++E++ + ++R
Sbjct: 508 ----TTEQVQVADLINKLEQTQQAAERDREEAAILRRESEEIKERYRQLEEQLR--EKRE 561
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI---VE 650
A L+ K ++ + + ++++ + V++ +L A+A + IK++ + + V
Sbjct: 562 AILE-KAYEEASKLVRASRLEAEEAVKELRAKLAQANARDREEAIKQARQKLQRVTSKVA 620
Query: 651 AHRPDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
A P E T P + GEQV + K A V+ V GD+ V VQ G M++
Sbjct: 621 AKEP-------ERTTPGEIPRQVKPGEQVFLPKYNQK-AYVLSVSGDN--VQVQVGIMKM 670
Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 767
V P LR+ E R + G S Y + ++ + SLDLR
Sbjct: 671 FV------------------PLKELRRVNEPRVTAH-GQSQVGQVYMDKAKSIETSLDLR 711
Query: 768 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
GM +EA +++ L A S + +IHG GTG ++ V L+N+PRV +
Sbjct: 712 GMTTDEALLEIEKYLDDAFIAGLSSVILIHGKGTGALRAAVHRELKNNPRVKSF 765
>gi|429736042|ref|ZP_19269961.1| MutS2 family protein [Selenomonas sp. oral taxon 138 str. F0429]
gi|429156327|gb|EKX98960.1| MutS2 family protein [Selenomonas sp. oral taxon 138 str. F0429]
Length = 785
Score = 298 bits (764), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 253/817 (30%), Positives = 389/817 (47%), Gaps = 113/817 (13%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ A+ + Q Q I D+ IL A +L E+ ++ T+ + NV
Sbjct: 45 RLHAETAEAVQIQQMQSPPFGGIYDLRAILKKATMSSVLELDELRSIMSTMGGMRNVKYF 104
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
D +Q S L ++ + L LE + ID + D AS +L I E
Sbjct: 105 FR-------DLVQDVSLLKDMARPIEILGTLERHLKDTID-EHGNFRDDASPELRRITRE 156
Query: 142 ----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
+ R + L ++L A Q + + ++T R R + +K ++ P G+ +
Sbjct: 157 LHTAQARVKDRLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQEYRNYFP-GVIHD 211
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
SSSGAT F+EP VE NN ++ + E IL L+ EIA+S + + + E
Sbjct: 212 QSSSGATLFVEPLATVELNNTVRQMGLAREQEIQRILQKLSGEIAQSAAILAENCEILAE 271
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
IDL FARAG A+ M+ P L+ D + ++ +HPLL
Sbjct: 272 IDLIFARAGLAREMEAYQPTLNR------DGVVRLKRARHPLL----------------- 308
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
SK D VPIDI++ +++ITGPNTGGKT SMKTLGL +L+
Sbjct: 309 ---------------SK---DKVVPIDIELGKNFSILLITGPNTGGKTVSMKTLGLLALL 350
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
+++G +LP LP + I ADIGD QS+EQ+LSTFS H IV I++ + L+L+
Sbjct: 351 AQSGCFLPTAPDSELPVYPNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDKAQQGDLILL 410
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DE+G+GTDP EG ALA SI+++ R + TTHYA L T ENA+ EF L+T
Sbjct: 411 DEVGAGTDPDEGAALARSIIEHFLQRDIAVLATTHYAALKTYAYTQTGVENASVEFDLKT 470
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLME 556
LRPTYR+L G G SNA +I++ +G ++I+ RA+ V ++H E + L +
Sbjct: 471 LRPTYRLLIGIPGASNAFSISRQLGLPQEIVARAEIYVN------EEHTHFERVVNELEQ 524
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
E++ E++ R EI + + E + L L K ++ + A+ +
Sbjct: 525 EKKDYEARNRVLYDKEREITAVEARLRSERETLAASRQELLHKAREEANNIVREARRSAE 584
Query: 617 TVVQDFENQLRDASADEINSLIKESESAI-AAIVEAH-----------RPDDDFSVSETN 664
++ ++Q D E I+E+ + + A V AH RPDD
Sbjct: 585 ETIKSLKDQFDDHGVKERRKAIQEARNRLDEAYVPAHTVRSTPVGKPVRPDD-------- 636
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
Q G+ V++ SL + TV+ V G + + VQ G +R VK + R + KRK
Sbjct: 637 -----IQTGDIVYIDSLAQE-GTVLSVQGHE--LAVQVGGLRTIVKMSACRFV---KRK- 684
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IAL 782
P PR+ K + +A S + A P++ D+RGM V EA L I
Sbjct: 685 --APKPRVEKVRI-----AASISRKAAEIRPQI-------DVRGMTVSEAESVLGKFIDD 730
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + S + +IHG GTG +++ + E L++H V +
Sbjct: 731 AVFTGLSKILLIHGKGTGALRQGLQEYLKHHRSVLSF 767
>gi|78185392|ref|YP_377827.1| MutS 2 protein [Synechococcus sp. CC9902]
gi|78169686|gb|ABB26783.1| MutS 2 protein [Synechococcus sp. CC9902]
Length = 814
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 262/848 (30%), Positives = 426/848 (50%), Gaps = 94/848 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
MG + Q+P +SL E+ + +T A L + L + D+ +L + G
Sbjct: 48 MGLESARATQLP--QSLAETLQRQAETVEMAVLDDLTEGGLSFRGVNDLRPVLLRCLKGG 105
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
+ S E+ AV TL A + +++ + Q P+ L++ L +LE+++
Sbjct: 106 VASGEELLAVAGTLAAARKLRRQIDD---------QELRPVCTALIETMVTLPDLEQRLK 156
Query: 118 FCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITK 173
F ++ + + DRAS L +R + R+ + L L ++ A+ F + +I +
Sbjct: 157 FSLE-EGGRVADRASPPLAGLRQQWNGVRQERRDKLQELTRRYAS--F----LQDSVIAQ 209
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R R + +KA + G + S+SG T F+EP+ + N V + EE +
Sbjct: 210 RHGRPVLAVKAGAVGQV-SGQVHDSSASGNTVFIEPRSVLTMGNKLVDIEARIRKEEQRV 268
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L+ L+ +A+ ER + L++ +L +DLA AR + +W+ V P L F +
Sbjct: 269 LAELSDLVAQDERVLNSLVEILLALDLALARGRYGRWLGAVPPHLLEDPEAPF----LLR 324
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
++HPLL+ RS + +P+ VPI + V + RV
Sbjct: 325 DLRHPLLIWQHKRS------SGSPV----------------------VPISVDVSAQLRV 356
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
V ITGPNTGGKT S+K+LGL +LM++AG+ +P P LPW +LADIGD QSL+Q+LS
Sbjct: 357 VAITGPNTGGKTVSLKSLGLVALMARAGMLIPCSGRPSLPWCAQVLADIGDEQSLQQSLS 416
Query: 414 TFSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVT 470
TFSGHI RI IL+ + +LVL+DE+G+GTDPSEG ALAT++L+ L DR L + T
Sbjct: 417 TFSGHIKRIGRILQALESGPVPALVLLDEVGAGTDPSEGTALATALLKALADRARLTIAT 476
Query: 471 THYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQR 530
TH+ +L LK D RFENA+ F+ ETL PTY +LWG G SNAL IA +G D ++ +
Sbjct: 477 THFGELKALKYTDDRFENASVAFNAETLSPTYELLWGIPGRSNALAIATRLGLDAGVLDQ 536
Query: 531 AQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
AQ L+ + + + Q L E+R++ ++ A AA+L A L+ E+ +
Sbjct: 537 AQALLA----LAAEGEVNTVIQGLEEQRQRQQAAAEDAAALLARTELLHEELLLRWQKQK 592
Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 650
++ A + + Q+++Q + + ++ ++++ +LRD AD +++ + + +
Sbjct: 593 QQTALHQEQGRQRLEQSIREGQKEVRSLIR----RLRDGRAD--GETARKAGQRLRKLED 646
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
HRP + + P+ GE+V + +LG K A V+ + D + V+ G MR V
Sbjct: 647 HHRPTKE---KRAPKPGWRPEVGERVRLLALG-KAAEVLAISDDGLQLTVRCGVMRTTVD 702
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
N + + RK + + G +V+TS+N+LD+RGMR
Sbjct: 703 LNAVESLDG-------------RKAEPPPVPVVKVQARSGLGAGAQVRTSRNTLDIRGMR 749
Query: 771 VEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP---RVAKYEQESPMNY 827
V EA ++ L + L+VIHG+GTG +K + L P RV EQ
Sbjct: 750 VHEAESTVEEQLR--NANGPLWVIHGIGTGKLKRGLRAWLDTVPYVERVVDAEQ-GDGGP 806
Query: 828 GCTVAYIK 835
GC+V +++
Sbjct: 807 GCSVVWVR 814
>gi|407473381|ref|YP_006787781.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
gi|407049889|gb|AFS77934.1| DNA mismatch repair protein MutS [Clostridium acidurici 9a]
Length = 792
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 250/836 (29%), Positives = 408/836 (48%), Gaps = 102/836 (12%)
Query: 18 EESQKLLNQTSAALAMM---QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
EE + L ++T A++++ S PL I D+ + A G +LSP + V T+RA
Sbjct: 41 EEVKYLQDETDEAVSLLLKRGSPPL--GGIHDVLSEVKRAEIGGILSPGGLLRVADTIRA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
+ L + + + S P+LE L+ + N E+E+ I F I D AS
Sbjct: 99 ARKIKGFLKQEKDENNSSY----PILESLIGDLNSYREIEDNI-FNAIVSEEEISDNASS 153
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
+L IR + + +N+ + L + + +IT R R V +K ++ + P G
Sbjct: 154 NLRNIRKQIQIKNDNIRTKLNSIINSSTNKKYLQDAIITIRSERYVVPVKQEYRSIFP-G 212
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
+ + SSSGAT F+EP V NN L +E E IL+ L+ + + I+
Sbjct: 213 LIHDQSSSGATLFIEPMAIVNLNNELKELKLNEKKEIEKILTELSEMVGEENEGIRSNQK 272
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ +ID FA+ + M+G P ++++ + INI+ +HPLL
Sbjct: 273 ILSQIDFIFAKGKLSLDMNGSKPNINNRGY------INIKKGRHPLL------------- 313
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
G+ D VP DI + ++ITGPNTGGKT ++KT+GL
Sbjct: 314 ---------------------GVKDV-VPTDIYLGDNFTTLLITGPNTGGKTVTLKTVGL 351
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
+LM ++GL +P ++ + F+ I ADIGD QS+EQ+LSTFS H++ IVDIL + S
Sbjct: 352 FTLMMQSGLQVPVEHGTEMAVFENIFADIGDEQSIEQSLSTFSSHMTNIVDILNNLDDNS 411
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP+EG ALA SIL YL +R V TTHY++L ENA+ EF
Sbjct: 412 LVLFDELGAGTDPTEGAALAMSILDYLYNRKIRTVATTHYSELKVYALTTEGIENASVEF 471
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
++ETL PTYR+L G G SNA I+K +G II A++ + ++ ++ S
Sbjct: 472 NVETLSPTYRLLIGVPGKSNAFEISKRLGLQDFIIDSAKEFI-----SKENIAFEDVLAS 526
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
+ ++R + E A L E+ L E+E++ ++ + + ++ + L A+
Sbjct: 527 IEKDRIETEKNREEANRLRREVNQLKEELEEKTLKIENNREKILREAREEARNVLLKARA 586
Query: 614 QIDTVVQDFENQLRDASAD---EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
+ + ++ N+L++ S + E + ++E++ + ++ + D S + S P
Sbjct: 587 ESEEIL----NELKEVSIEIEKEQSRRLQEAKEKLKGNID--NIEGDLSEQILSKKSAKP 640
Query: 671 ----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
GE V + SL ++ TV+ P ++ VLVQ G M++ V + I
Sbjct: 641 LASVDIGENVKILSL-NQTGTVLSAPDENGNVLVQVGIMKITVPLDTIE----------- 688
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
+ +K+ + + GSA S + S K+ LDLRG +EEA ++D L A
Sbjct: 689 ----KSKKESKVQTKGSAKSVIKSKSV-----NVKSDLDLRGQNLEEAMLEVDKFLDDAY 739
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNH-----PRVAKYEQESPMNYGCTVAYIK 835
V+ +IHG GTG+++E + ++L+ H R+ Y + G TV IK
Sbjct: 740 LAGLKVVNIIHGKGTGILREGIGQLLKRHRHVKASRLGNYGEGGT---GVTVVEIK 792
>gi|421150022|ref|ZP_15609678.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. Newbould 305]
gi|394329412|gb|EJE55514.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. Newbould 305]
Length = 782
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418925376|ref|ZP_13479278.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG2018]
gi|377744445|gb|EHT68422.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG2018]
Length = 782
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSSNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|417796292|ref|ZP_12443507.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21305]
gi|443640481|ref|ZP_21124470.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21196]
gi|334269791|gb|EGL88204.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21305]
gi|443405162|gb|ELS63772.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21196]
Length = 782
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418993763|ref|ZP_13541400.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG290]
gi|377746922|gb|EHT70892.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG290]
Length = 782
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 238/819 (29%), Positives = 405/819 (49%), Gaps = 125/819 (15%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN---NVWKKLTEAAELDGDSLQRYS 97
LS + ++ ++ A G +L+ SE+ ++R ++ N +K+L E D +Y
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYKQLVEE-----DEGVKYP 119
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLL 153
L + + LT+L ++I C + D AS +L+ IR++ +R +NLD ++
Sbjct: 120 ILDDKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIV 177
Query: 154 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 213
K A Q + ++T R R + +KA ++ +GI + S+SG T ++EP V
Sbjct: 178 KSQANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVV 232
Query: 214 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMD 272
E NN RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ +
Sbjct: 233 EMNNQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIK 291
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
G PI D ++ + HPLL N E + +
Sbjct: 292 GTKPIFKE------DRTVYLPKAYHPLL-----------------------NRETVIAN- 321
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L
Sbjct: 322 ---------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQL 370
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
F + DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG AL
Sbjct: 371 SVFKNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAAL 430
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A SIL ++R L + TTHY +L NA+ EF ++TL PTY++L G G S
Sbjct: 431 AMSILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRS 490
Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------A 565
NA +I+K +G II +A+ ++ E +E+ +SL +++E+Q
Sbjct: 491 NAFDISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLV 545
Query: 566 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
+ A +H ++ Y++ ++ K L A ++ Q++ A + D +++D Q
Sbjct: 546 KEAEQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQ 597
Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKS 680
LR+ + +KE E I + R DD + + ++ G++V V S
Sbjct: 598 LREQKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLS 649
Query: 681 LGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQ 740
G K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 650 YGQK-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR- 700
Query: 741 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMG 798
QT K LDLRG R E+A +LD L A + +++IHG G
Sbjct: 701 -----------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKG 743
Query: 799 TGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
TG +++ V + L+ H V+ + P +G TVA +K
Sbjct: 744 TGALQKGVQKHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|384549903|ref|YP_005739155.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302332752|gb|ADL22945.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JKD6159]
Length = 782
Score = 298 bits (762), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 239/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + V + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEVKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|417901588|ref|ZP_12545464.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21266]
gi|341845427|gb|EGS86629.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21266]
Length = 782
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSVKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKKKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|57651753|ref|YP_186017.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus COL]
gi|87161406|ref|YP_493741.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88194845|ref|YP_499643.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|151221268|ref|YP_001332090.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. Newman]
gi|161509318|ref|YP_001574977.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|221140458|ref|ZP_03564951.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. JKD6009]
gi|258451841|ref|ZP_05699862.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5948]
gi|262048725|ref|ZP_06021607.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus D30]
gi|282919921|ref|ZP_06327650.1| MutS2 protein [Staphylococcus aureus A9765]
gi|284024069|ref|ZP_06378467.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 132]
gi|294848134|ref|ZP_06788881.1| MutS2 protein [Staphylococcus aureus A9754]
gi|304381299|ref|ZP_07363952.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|379014337|ref|YP_005290573.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VC40]
gi|384861738|ref|YP_005744458.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|384869677|ref|YP_005752391.1| MutS2 protein [Staphylococcus aureus subsp. aureus T0131]
gi|385781372|ref|YP_005757543.1| mutS2 protein [Staphylococcus aureus subsp. aureus 11819-97]
gi|387142755|ref|YP_005731148.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TW20]
gi|415688463|ref|ZP_11452153.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS01]
gi|417648497|ref|ZP_12298321.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21189]
gi|418282999|ref|ZP_12895756.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21202]
gi|418286447|ref|ZP_12899093.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21209]
gi|418318056|ref|ZP_12929471.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21232]
gi|418321588|ref|ZP_12932927.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VCU006]
gi|418570974|ref|ZP_13135228.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21283]
gi|418574595|ref|ZP_13138762.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21333]
gi|418578974|ref|ZP_13143069.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1114]
gi|418647620|ref|ZP_13209683.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-88]
gi|418657820|ref|ZP_13219574.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-111]
gi|418875077|ref|ZP_13429339.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC93]
gi|418903353|ref|ZP_13457394.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1770]
gi|418911750|ref|ZP_13465733.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG547]
gi|419775285|ref|ZP_14301227.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CO-23]
gi|422743467|ref|ZP_16797451.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA177]
gi|422745626|ref|ZP_16799565.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA131]
gi|424784971|ref|ZP_18211774.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus CN79]
gi|440708153|ref|ZP_20888828.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21282]
gi|440734591|ref|ZP_20914203.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|448744704|ref|ZP_21726588.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/Y21]
gi|81694717|sp|Q5HGU0.1|MUTS2_STAAC RecName: Full=MutS2 protein
gi|122539777|sp|Q2FZD3.1|MUTS2_STAA8 RecName: Full=MutS2 protein
gi|123486337|sp|Q2FHT7.1|MUTS2_STAA3 RecName: Full=MutS2 protein
gi|229486380|sp|A6QG46.1|MUTS2_STAAE RecName: Full=MutS2 protein
gi|229486381|sp|A8Z1S5.1|MUTS2_STAAT RecName: Full=MutS2 protein
gi|57285939|gb|AAW38033.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
subsp. aureus COL]
gi|87127380|gb|ABD21894.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus subsp.
aureus USA300_FPR3757]
gi|87202403|gb|ABD30213.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
subsp. aureus NCTC 8325]
gi|150374068|dbj|BAF67328.1| DNA mismatch repair MutS2 family protein [Staphylococcus aureus
subsp. aureus str. Newman]
gi|160368127|gb|ABX29098.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus USA300_TCH1516]
gi|257860449|gb|EEV83276.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5948]
gi|259163181|gb|EEW47741.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus D30]
gi|269940638|emb|CBI49017.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TW20]
gi|282594637|gb|EFB99621.1| MutS2 protein [Staphylococcus aureus A9765]
gi|294824934|gb|EFG41356.1| MutS2 protein [Staphylococcus aureus A9754]
gi|302750967|gb|ADL65144.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304340282|gb|EFM06223.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC BAA-39]
gi|315196867|gb|EFU27210.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS01]
gi|320141041|gb|EFW32888.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320143098|gb|EFW34888.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA177]
gi|329313812|gb|AEB88225.1| MutS2 protein [Staphylococcus aureus subsp. aureus T0131]
gi|329730765|gb|EGG67144.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21189]
gi|364522361|gb|AEW65111.1| mutS2 protein [Staphylococcus aureus subsp. aureus 11819-97]
gi|365167155|gb|EHM58631.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21209]
gi|365168596|gb|EHM59934.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21202]
gi|365224203|gb|EHM65468.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VCU006]
gi|365244748|gb|EHM85405.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21232]
gi|371978726|gb|EHO95967.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21333]
gi|371981854|gb|EHO99015.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21283]
gi|374363034|gb|AEZ37139.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus VC40]
gi|375029330|gb|EHS22658.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-88]
gi|375039929|gb|EHS32841.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-111]
gi|377697001|gb|EHT21356.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1114]
gi|377725128|gb|EHT49243.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG547]
gi|377742368|gb|EHT66353.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1770]
gi|377771122|gb|EHT94880.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC93]
gi|383970969|gb|EID87059.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CO-23]
gi|421956381|gb|EKU08710.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus CN79]
gi|436431619|gb|ELP28972.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus DSM 20231]
gi|436505251|gb|ELP41179.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21282]
gi|445562010|gb|ELY18195.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/Y21]
Length = 782
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418928400|ref|ZP_13482286.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1612]
gi|377738312|gb|EHT62321.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1612]
Length = 782
Score = 297 bits (761), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAKYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|296133368|ref|YP_003640615.1| MutS2 family protein [Thermincola potens JR]
gi|296031946|gb|ADG82714.1| MutS2 family protein [Thermincola potens JR]
Length = 782
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 247/821 (30%), Positives = 395/821 (48%), Gaps = 96/821 (11%)
Query: 26 QTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+T+ A + + +P + L + D GI+ A G +L P+E+ V L A + + +
Sbjct: 45 ETAEAAEIYRKEPDVPLGGMRDTRGIIRKANIGGILEPAELLDVAGNLVAARRLKRFFS- 103
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
D +Y + +L+KN ELEEKI ID + D AS +L IR +
Sbjct: 104 ------DRSHQYPIMGDLVKNLFINKELEEKISQAIDPSGAVA-DEASPELRRIRHRIRE 156
Query: 145 NMENLDSLLKKVA-AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
N+ S ++ + +Q +Q +P+IT R R V +K ++ P GI + S+SGA
Sbjct: 157 TEINIKSKMEGIIRSQEYQKF-FQEPIITVRGDRYVVPVKQEYRGQFP-GIIHDQSASGA 214
Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
T F+EP AVE NN +L + E E IL+ L+A + E+ + ID A
Sbjct: 215 TLFIEPVAAVELNNELRKLYSDEEREVLRILTQLSASVKAFSEELLSDAKILGTIDFILA 274
Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
+ A M+ PI + D IN+ +HPL+ G
Sbjct: 275 KGKLAHRMNASKPIFNK------DGYINLRKCRHPLIKGHV------------------- 309
Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
VPIDI + + V+VITGPNTGGKT S+KT+GL + M++AGL+
Sbjct: 310 -----------------VPIDIYLGRDFHVLVITGPNTGGKTVSLKTVGLTAAMAQAGLH 352
Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
+P + ++P F I DIGD QS+EQ+LSTFSGH+ I+ IL V+ +LVL+DE+G+G
Sbjct: 353 IPCEPGSQVPVFHDIFVDIGDEQSIEQSLSTFSGHLKNIIHILAKVNESALVLLDELGAG 412
Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
TDP EG ALA +IL+YL + V TTHY++L + ENA+ EF +TLRPTY+
Sbjct: 413 TDPVEGAALAMAILEYLYQKKARTVATTHYSELKVFAFERQGVENASVEFDSKTLRPTYK 472
Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES 563
+L G G S+A IA +G ++ RA+ + ++ + ++L + L RRK E
Sbjct: 473 LLIGQPGRSSAFEIALRLGLPEALVTRARSFL-----TSEEIQVADLVEELETNRRKAEE 527
Query: 564 QARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE 623
+ R A L E+ ++ R+ + + L+ R L K ++ + A+ + D +V++
Sbjct: 528 ERRKAERLRRELDEMRRDYAAKLEALENRRKELVEKAREEAASIVRQARKEADELVKE-- 585
Query: 624 NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF---GEQVHVKS 680
LR ++ + E+E A + E D+ + E + P+ GE V +
Sbjct: 586 --LRRYVQEKRAEQLAEAEEARNRLKELEDSKDEELMQEKAAAGEIPKGLKEGEPVFLPR 643
Query: 681 LGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQ 740
++ V+ P ++ + VQ G +++ V + + R++QE
Sbjct: 644 F-NQTGYVLTTPDENGQLYVQAGILKLAVHVSEV------------------RRKQEKPA 684
Query: 741 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMG 798
+A + + G + + ++ LD+RG V+EA L+ L A + +IHG G
Sbjct: 685 VYTAPTGTGKLVVG-KAKEARTELDIRGKTVDEALPDLEKFLDDAYLAGLQQVQIIHGKG 743
Query: 799 TGVVKERVLEILRNHPRVAKYEQESPMNY----GCTVAYIK 835
TGV+++ V L H KY QE + + G V IK
Sbjct: 744 TGVLRKAVNSYLAKH----KYVQEFRLGHYGEGGTGVTVIK 780
>gi|427702746|ref|YP_007045968.1| MutS2 family protein [Cyanobium gracile PCC 6307]
gi|427345914|gb|AFY28627.1| MutS2 family protein [Cyanobium gracile PCC 6307]
Length = 820
Score = 297 bits (761), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 235/764 (30%), Positives = 374/764 (48%), Gaps = 100/764 (13%)
Query: 102 LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVA 157
L+ L ELE+++ FC++ + + DRAS LE +R A R + L L+++
Sbjct: 127 LVAELRTLPELEQRLHFCLE-EGGRVADRASGPLEAVRRQLLALRAERRDRLQELVRRYG 185
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ + ++++R R + +KA + G+ + S+SG+T ++EP+ + N
Sbjct: 186 SLL------QDTVVSERGGRPVLAVKAGAAAQV-GGLVHDSSASGSTVYVEPQAVIPLGN 238
Query: 218 MEVRLSNSEIAE---ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
R+ ++E E E + S L+A + + + +L ++ ID ARA + QW+ V
Sbjct: 239 ---RIRDAEGQERELERQVRSELSALVGEQAEPLDHLQQVLVRIDAGLARARYGQWLGAV 295
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P L+ S D+ + ++HPLLL R P+
Sbjct: 296 RPELAD----SADAPFELCDLRHPLLLWQERRE------GGRPV---------------- 329
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
VP+ I+V E RVV ITGPNTGGKT ++K+LGLA+LM++AGL+LP PRLPW
Sbjct: 330 ------VPVTIRVGPELRVVAITGPNTGGKTVTLKSLGLAALMARAGLFLPCAGTPRLPW 383
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELV--------------SRESLVLIDEI 440
+LADIGD QSL+QNLSTFSGHI RI IL + SLVL+DE+
Sbjct: 384 CGQVLADIGDEQSLQQNLSTFSGHIRRIARILAALPAGAGFPEGAALPQGPASLVLLDEV 443
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP+EG ALA ++L++L DR L V TTH+ +L LK D RFENA+ F +ETL P
Sbjct: 444 GAGTDPTEGSALAAALLRHLADRARLTVATTHFGELKALKYADPRFENASVAFDVETLSP 503
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP------ERQQHRKSELYQSL 554
TYR+ WG G SNAL IA +G D ++ A +E P R + Q
Sbjct: 504 TYRLQWGIPGRSNALAIASRLGLDPAVLAVAAAQLE---PGGEGDVNRVIEGLEQERQRQ 560
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
E + LH E++ + + ++++ +L + ++ Q E+ +
Sbjct: 561 QEAAEAAAALLARTELLHEELLQRWSQQKEQSAELQEQRRQRLELSIREGQGEVRRLIRR 620
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
+ +V Q+ R A +++ + + + HRP + + + P+ G+
Sbjct: 621 LRSVGQEVRVGGRVA-----GETARQAGQRLRRLEQQHRPLPE----RRDHGGWRPRVGD 671
Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP-RLR 733
++ + +LG K A V+ + D + V+ G +R+ V+ I + K P R+R
Sbjct: 672 RIRLLALG-KAAEVLAISDDGSELSVRCGVLRLTVELAGIEGLHGEKPAPPEPPPQVRIR 730
Query: 734 KQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFV 793
S S GP V+T N++D+RG+RV EA ++ L + ++V
Sbjct: 731 ------------SRRSPGSRGPEVRTEGNTVDVRGLRVHEAEAAVEERLRG--ANGPVWV 776
Query: 794 IHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
IHG+GTG +K + E L P V + + GC+V ++K
Sbjct: 777 IHGIGTGKLKRGLREWLSGLPWVERVSDADQGDGGPGCSVIWVK 820
>gi|418598399|ref|ZP_13161909.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21343]
gi|374399756|gb|EHQ70892.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21343]
Length = 782
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRIETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIFNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|410658584|ref|YP_006910955.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. DCA]
gi|410661571|ref|YP_006913942.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. CF]
gi|409020939|gb|AFV02970.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. DCA]
gi|409023927|gb|AFV05957.1| Recombination inhibitory protein MutS2 [Dehalobacter sp. CF]
Length = 796
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 245/831 (29%), Positives = 395/831 (47%), Gaps = 134/831 (16%)
Query: 23 LLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL +T +++ PL + +I L G L+P E+ +R TL+ +
Sbjct: 48 LLRETDEGKILLRINPLFSVRGAREIRPYLERCDRGGTLNPEELLEIRDTLKTARRLKNT 107
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIR 139
L + + D L E + E+E+ I I D I DRASE+L +R
Sbjct: 108 LIDGGQSGKDQYSELYTLRETVDGIVPQKEIEDDISRSISEDGD---INDRASEELARLR 164
Query: 140 AER----KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ +R E+LD +L+ + Q + +IT R R V IK + P GI
Sbjct: 165 KAKGISQQRIKESLDGILRNPSYQKM----LQDNVITSRGDRYVVPIKMEYSSAFP-GIV 219
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SGAT F+EP V+ N ++ E E IL LTA++ EI L + +
Sbjct: 220 HDQSASGATLFIEPMAVVQLGNELREITLKENREVQKILQQLTAKVTARIPEILLLNEAL 279
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+++D A+A ++ M+ P++ ++ V + G +HPLL G
Sbjct: 280 IKLDFILAKARLSEDMEAGSPLVMNKQEV------KLIGARHPLLTG------------- 320
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
P+ VPI + + + + ++ITGPNTGGKT ++KT+GL +
Sbjct: 321 -PV----------------------VPISVGLGMDDQFLIITGPNTGGKTVTLKTIGLMA 357
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M ++GL++PA++ RL F I DIGD QS+EQ+LSTFS H++ IVDI SLV
Sbjct: 358 VMMQSGLHIPAESDSRLGIFTRIFVDIGDEQSVEQSLSTFSAHMTNIVDITREADSRSLV 417
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP EG ALA +IL L +R V TTHY L ENA+ EF+
Sbjct: 418 LLDELGAGTDPGEGAALAMAILAELLERGSCGVATTHYGALKTFAYNTPGVENASVEFNP 477
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
ETL+PTYR+L G G SNAL IA+ +G I+++A+ + + ++S+L ++L
Sbjct: 478 ETLKPTYRLLTGIPGRSNALAIAQRLGLGSSILEKARSFI-----SERDTKESDLLENLE 532
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
+ +R++E + R+ +E+E K + +AA LK K +++
Sbjct: 533 DTQREIELKKRS--------------VEEEQKKAEHKAAELKKK------------NLEL 566
Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH---RPDDDFSVSET--------- 663
+ +D + ++ + D + E+E I I EA R + + ++ +T
Sbjct: 567 EEKYEDIMRKAKEEAVDVVRQARLEAEGIIKEIKEAQKKERREQEAALEKTRQGLKKLSE 626
Query: 664 ----------NTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
N S P + G+ V++ +L K V++ P +++ VLVQ G ++V V
Sbjct: 627 KVYETEYTGKNKSGPKPGQVEPGQTVYMPNLRQK-GQVLQKPDNNNEVLVQTGILKVSVP 685
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
+ IR + +++ P + Q G+ G S + ++ +DLRG
Sbjct: 686 LSEIRLVDETRK-----PEHFAKTIQ-----GTFGLS--------KAVNLRSEIDLRGKL 727
Query: 771 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
VEE LD L A + + VIHG GTG ++ + + L+ HP VA Y
Sbjct: 728 VEEGILMLDKYLDDAVITGINQVSVIHGKGTGALRAGIHQFLKRHPHVAAY 778
>gi|418949118|ref|ZP_13501378.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-157]
gi|375369683|gb|EHS73552.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-157]
Length = 782
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|293500954|ref|ZP_06666805.1| MutS2 protein [Staphylococcus aureus subsp. aureus 58-424]
gi|291095959|gb|EFE26220.1| MutS2 protein [Staphylococcus aureus subsp. aureus 58-424]
Length = 780
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 237/811 (29%), Positives = 402/811 (49%), Gaps = 111/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E + +S Y+ + +R +L+ + A +H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
++ Y++ ++ K L A ++ Q++ A + D +++D QLR+ +
Sbjct: 554 DLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLREQKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + R DD + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ D++ + VQ G +++++ PI + ++K P + +Q
Sbjct: 657 LEIVNDEEAI-VQMGIIKMKL------PIEDLEKKEKVKPTKMVTRQNR----------- 698
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R E+A +LD L A + +++IHG GTG +++ V
Sbjct: 699 ---------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 749
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V+ + P +G TVA +K
Sbjct: 750 QQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 780
>gi|418559141|ref|ZP_13123687.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21252]
gi|371975432|gb|EHO92726.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21252]
Length = 782
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQKHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|417895692|ref|ZP_12539670.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21235]
gi|341841369|gb|EGS82830.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21235]
Length = 782
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 404/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINKT--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|163814590|ref|ZP_02205979.1| hypothetical protein COPEUT_00741 [Coprococcus eutactus ATCC 27759]
gi|158450225|gb|EDP27220.1| MutS2 family protein [Coprococcus eutactus ATCC 27759]
Length = 821
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 225/707 (31%), Positives = 344/707 (48%), Gaps = 96/707 (13%)
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS L+ +R ++ E L + L K+ + + L+T R R C+ +KA +K
Sbjct: 178 DDASSGLKAVRRNKRLTNEKLHNQLAKLVSDTSKQTMFQDNLVTMRNGRYCIPVKAEYKN 237
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
P G+ + SS+GAT F+EP V NN L N E+AE IL L+A+ A I
Sbjct: 238 HFP-GMIHDQSSTGATVFIEPMAIVNLNNELKELDNQELAEIEKILESLSAQTAAEIEYI 296
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
KY D + E+D FARA FA+ G PI ++ D ++I +HPLL
Sbjct: 297 KYDFDTLAELDFIFARASFARSYKGTEPIFNT------DGIVDIRQGRHPLL-------- 342
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ TV VP+DIK+ + ++++TGPNTGGKT S+
Sbjct: 343 ----------------EKHTV-----------VPVDIKLGEDYNLLIVTGPNTGGKTVSL 375
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL SLM ++GL++PA + RL FD + ADIGD QS+EQNLSTFS H+S IV IL+
Sbjct: 376 KTLGLFSLMGQSGLHIPALDGSRLNVFDDVFADIGDEQSIEQNLSTFSSHMSNIVYILDH 435
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V+ SLVL DE+G GTDP EG ALA +IL +L D + TTHY++L EN
Sbjct: 436 VTPGSLVLFDELGGGTDPIEGAALAIAILSHLNDMGVRCMATTHYSELKTFAMSTPGVEN 495
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF + TL+PTY+++ G G SNA IAK +G D II+ A+ ++ + +
Sbjct: 496 ASCEFDVATLQPTYKLMIGIPGKSNAFAIAKKLGIDESIIESAKANIDSDTVDFET---- 551
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
L L +R++E A L + L + + +L + A + AK Q+ + +
Sbjct: 552 -LIADLERSKREIEQDKADIARLKEDAKQLQERAQMKDSELSDKKAEILAKARQEASEII 610
Query: 609 NFAKVQIDTVVQDFENQLRD-ASAD-------------EINSLIKESESAIAAIVEAHRP 654
AK + D ++ + + A AD +IN L K +E + H+
Sbjct: 611 EEAKAEADAAIRKYNKWTTNPAKADAKAMEAERQKLRAKINDLGKMNEEKRKTVKSDHKA 670
Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
DF V G+ VHV S+ D T+ + + VQ G + + ++
Sbjct: 671 -SDFKV------------GDTVHVISM-DSEGTITALADSKGKLKVQMGIISASLPPTDL 716
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
+ + K+K P+ + + + G S R+ K +++ GM V+EA
Sbjct: 717 LLVEHEKKK------PQ-------KATVTGGKSM------ARMMNIKPEINVLGMTVDEA 757
Query: 775 SHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ +D L A + +IHG GTG +++ + + L++ P V +
Sbjct: 758 TSLVDRFLDDALMAHLHRVTIIHGKGTGALRKGIHQFLKSQPHVKSF 804
>gi|21282756|ref|NP_645844.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MW2]
gi|49485982|ref|YP_043203.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MSSA476]
gi|297208218|ref|ZP_06924648.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300912295|ref|ZP_07129738.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH70]
gi|418934045|ref|ZP_13487869.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC128]
gi|418987965|ref|ZP_13535638.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1835]
gi|448742615|ref|ZP_21724554.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/314250]
gi|38604916|sp|Q8NX56.1|MUTS2_STAAW RecName: Full=MutS2 protein
gi|56749203|sp|Q6GA70.1|MUTS2_STAAS RecName: Full=MutS2 protein
gi|21204194|dbj|BAB94892.1| MutS-like protein [Staphylococcus aureus subsp. aureus MW2]
gi|49244425|emb|CAG42853.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus MSSA476]
gi|296886957|gb|EFH25860.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus ATCC 51811]
gi|300886541|gb|EFK81743.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH70]
gi|377719753|gb|EHT43923.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1835]
gi|377771825|gb|EHT95579.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC128]
gi|445546653|gb|ELY14940.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus KT/314250]
Length = 782
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 404/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L +I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSVKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418316581|ref|ZP_12928018.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21340]
gi|365240860|gb|EHM81619.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21340]
Length = 782
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 404/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|334138498|ref|ZP_08511917.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF7]
gi|333604147|gb|EGL15542.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF7]
Length = 825
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 238/795 (29%), Positives = 386/795 (48%), Gaps = 113/795 (14%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I DI ++ A G +L+PSE+ + T+ + K L +++ P+ LL
Sbjct: 107 IRDIRAAVHRARVGGMLNPSELLDIATTIYGGRRLRKFL--------ETMDEQHPVPMLL 158
Query: 104 KNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
L++ E++I CID ++D AS +L +R+E + R E L+ +++
Sbjct: 159 SWAELLSDNKDTEDRIKSCIDDNA-AVMDSASGELSRVRSELRTGEARVREKLEQMIRNP 217
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + L+T R R + +K ++ G+ + S+SGAT F+EP+ V N
Sbjct: 218 SVQKM----LQDALVTMRGDRYVIPVKQEYRSSF-GGMIHDQSASGATLFIEPEAVVTLN 272
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N L E AE IL +LT+++A+ E ++ ++ + ++D FA+AG A+ M P
Sbjct: 273 NRIRELKFKEEAEVEKILRMLTSQVAEIEEDLLSDVELLAQLDFTFAKAGLAREMKATLP 332
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
L+ + + + +HPL+ PL
Sbjct: 333 KLNDRGFLKLKRA------RHPLI----------------PL------------------ 352
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D VPID+++ +++TGPNTGGKT S+KT+GL SLM+ +GL++PA+ L FD
Sbjct: 353 -DKVVPIDLELGGSFTTIIVTGPNTGGKTVSLKTVGLLSLMAMSGLFVPAEEGSELCVFD 411
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQ+LSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA S+
Sbjct: 412 GIFADIGDEQSIEQSLSTFSSHMTNIIGILRDMTPKSLVLLDELGAGTDPAEGSALAISL 471
Query: 457 LQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
L+ + R+G ++ TTHY++L + NA+ EF ++TL PTYR+L G G SNA
Sbjct: 472 LENIH-RMGCRMIATTHYSELKAYAFERRGVINASMEFDVQTLSPTYRLLVGVPGRSNAF 530
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
IA+ +G R II +A+ V + R + SL E R E++ +A + E
Sbjct: 531 AIAERLGLPRAIIDKARGQV-----SDEDQRVETMIASLEENRLTAEAERHSAEQIRREN 585
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
+L + E LD + + K ++ Q + A+ + + ++ D +
Sbjct: 586 EELRAALSAERAKLDEQRDKVLLKAEREAQDAIAKARREAEEIIAD------------LR 633
Query: 636 SLIKESESAIA--AIVEAHRPDDDFSVSETNTSSFTPQF-------GEQVHVKSLGDKLA 686
L KE AI ++ A R D+ + P+ G++V V SLG K
Sbjct: 634 RLAKEEAGAIKDHKLIAARRRLDEAEPKLRKPGAKRPERSKAEVEPGDEVRVVSLGQK-G 692
Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 746
VVE+ + V VQ G M+++V K ++ I S +K K+ D
Sbjct: 693 HVVEIVNSSE-VTVQLGIMKMKVNKTDLEVIKASPQKKPVQQVAATVKRTRD-------- 743
Query: 747 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKE 804
+ +DLRG VEE +LD L + + + ++VIHG GTGV++
Sbjct: 744 -----------DNIRMEVDLRGTNVEEGIMELDRFLDESFLNNFAQVYVIHGKGTGVLRT 792
Query: 805 RVLEILRNHPRVAKY 819
+ + LR H V +
Sbjct: 793 GIQDYLRRHKHVKSF 807
>gi|253731756|ref|ZP_04865921.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
gi|253724485|gb|EES93214.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus USA300_TCH959]
Length = 782
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 404/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418312639|ref|ZP_12924148.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21334]
gi|365238284|gb|EHM79121.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21334]
Length = 782
Score = 296 bits (759), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 404/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVKKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|387780256|ref|YP_005755054.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus LGA251]
gi|416839782|ref|ZP_11903140.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O11]
gi|416847321|ref|ZP_11907055.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O46]
gi|323440694|gb|EGA98404.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O11]
gi|323442363|gb|EGA99992.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus O46]
gi|344177358|emb|CCC87824.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus LGA251]
Length = 782
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 404/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418644704|ref|ZP_13206844.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-55]
gi|375025107|gb|EHS18517.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-55]
Length = 781
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 239/817 (29%), Positives = 403/817 (49%), Gaps = 122/817 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLEHNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN-SKRKNAANPAPRLRKQQEDRQSG 742
K V+E+ D++ + VQ G +++++ PI + K K P + +Q
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKNKRKVKPTKMVTRQNR----- 699
Query: 743 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 800
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 700 ---------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTG 744
Query: 801 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 745 ALQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 781
>gi|379795514|ref|YP_005325512.1| MutS2 protein [Staphylococcus aureus subsp. aureus MSHR1132]
gi|356872504|emb|CCE58843.1| MutS2 protein [Staphylococcus aureus subsp. aureus MSHR1132]
Length = 782
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 235/816 (28%), Positives = 399/816 (48%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ SE+ ++R ++ N + E D + +Y+ L
Sbjct: 65 LSGLSKVSALIHRADIGGVLNVSELNLIKRLIQVQNQFKTFYNQLVEEDEEV--KYAILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 EKMNQLPVLTDLFQQINET--CDTYDLYDSASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A E++ + ++V+ +D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGNVA-VEKDALLVAEQVMGHLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL + A +N+ D+E
Sbjct: 295 PIFKEERTVYLPKAY------HPLL------NREAVVANTIEFMEDIE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y + ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLTKQYHQYQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ +++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNEEEAI-VQMGIIKMKL------PIDDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
Q K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QIIKTELDLRGYRYEDALMELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|238926801|ref|ZP_04658561.1| recombination and DNA strand exchange inhibitor protein MutS2
[Selenomonas flueggei ATCC 43531]
gi|238885333|gb|EEQ48971.1| recombination and DNA strand exchange inhibitor protein MutS2
[Selenomonas flueggei ATCC 43531]
Length = 785
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 251/810 (30%), Positives = 392/810 (48%), Gaps = 99/810 (12%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT---LRAVNNV 78
+L +T A+ + Q QP I + IL A G LL E+ V+ T +R V
Sbjct: 45 QLHMETEEAVRVAQIQPPPFDGIHHLREILKKAGRGILLELDELRLVKSTIGGMRDVKYF 104
Query: 79 WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
++ L+ AEL + L R +L +L+ N ++E F D +L R + +L
Sbjct: 105 FRDLSADAELLKE-LARRIEILGMLER-NLKAAIDEYGNFRDDASP--VLHRITNEL--- 157
Query: 139 RAERKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
R + R + L S+L A Q +FQ + ++T R R + +K ++ P G+ +
Sbjct: 158 RTAQSRVKDRLSSVLHDAAYQKMFQ-----EAIVTVRDERYVIPVKQEYRSQFP-GVIHD 211
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S+SGAT F+EP VE NN ++ + E I+ LT EIA+S + + +
Sbjct: 212 QSASGATLFIEPLAIVELNNTVRQMGIAREQEILRIMQRLTGEIARSADILSANCTILSD 271
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+DL FARA A+ M PIL+ +V + +HPLL P
Sbjct: 272 LDLIFARASLAREMRAYPPILNRDGYVYLRRA------RHPLL----------------P 309
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
L D VPIDI + ++ITGPNTGGKT SMKTLG+ +LM
Sbjct: 310 L-------------------DKVVPIDIALGKTFSTLLITGPNTGGKTVSMKTLGILALM 350
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
S++G +LPA++ +P + I ADIGD QS+EQ+LSTFS H IV I++ + LVL+
Sbjct: 351 SQSGCFLPAESGSEIPVYQNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDRATSGDLVLL 410
Query: 438 DEIGSGTDPSEGVALATSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA SI++ +L +R+ V TTHYADL ENA+ EF L+
Sbjct: 411 DEVGAGTDPDEGAALARSIIEHFLMNRIA-TVATTHYADLKTYAYTQQGVENASVEFDLK 469
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS-----ELY 551
TLRPTYR+L G G SNA +I++ +G +I+ RA++ V E H ++ E
Sbjct: 470 TLRPTYRLLIGIPGASNAFSISRQLGLSEEIVARAEEYVS----EDHAHFETVVHDLECA 525
Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
+++ EE+ +L + T E + R +++K + H +E + +E A
Sbjct: 526 KTIYEEKNQLLYKKETDIGRAEERLRAERAAFEQSK---KELFHKAREEANNIVRE---A 579
Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ 671
+ + ++ + Q D E I E+ S + P + S+ + + Q
Sbjct: 580 RRIAEETIKSLKEQFDDHGIKERQKAIHEARSRLNETYIHDMPQKNPSIGK-DIHPGDVQ 638
Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
G+ V++++L + TV+ + G++ T VQ G +R VK + I + +RKN N
Sbjct: 639 IGDTVYIRTLAQE-GTVLSLQGEELT--VQVGGLRTIVKMSACSFIGHRERKNHVN---- 691
Query: 732 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRS 789
+ S + + A P++ D+RGM V EA L+ I A + S
Sbjct: 692 -------KVHASGAMTKKAAEIRPQI-------DVRGMTVYEAESVLEKFIDDAVFSGLS 737
Query: 790 VLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ VIHG GTG ++ + + + H V +
Sbjct: 738 TVLVIHGKGTGTLRLGLWDYFKRHCSVCSF 767
>gi|417799021|ref|ZP_12446173.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21310]
gi|334274913|gb|EGL93219.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21310]
Length = 782
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 404/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|386830679|ref|YP_006237333.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus HO 5096 0412]
gi|385196071|emb|CCG15689.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus HO 5096 0412]
Length = 782
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 404/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEECTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|123965482|ref|YP_001010563.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9515]
gi|123199848|gb|ABM71456.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9515]
Length = 803
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 248/850 (29%), Positives = 420/850 (49%), Gaps = 102/850 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
MG VV + +IP E S++LL +T + ++ + + S + DI + G
Sbjct: 41 MGKNVVLQFEIP--TEYEISRRLLKETIEINELEKNLDKSISFSGVFDICKNIEICSKGG 98
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+++ S++ + T+ A N+ K L LD + S L+ L + N ++E+ +
Sbjct: 99 VINSSDLLEIAETISASRNLKKIL-----LDFEQRPFISAFLKGLIDHN---QIEKILKN 150
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
I+ I DRAS+ L +R E L+ K I ++ R R
Sbjct: 151 GIESNGRI-SDRASQKLANLRQELLSKKSERRVLVNKFIQNNLPY--IQDTIVGDRYGRP 207
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN----MEVRLSNSEIAEETAIL 234
+ IK + GI + S+SG T ++EP+ V N ME R++ EE +L
Sbjct: 208 VLAIKVQYAEKFK-GIIHDSSASGNTIYLEPESIVLKGNKIASMEARVA----GEEFKLL 262
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ I + + + + + +L + + R+ ++ W+ G PI+ + VS + G
Sbjct: 263 KEWSHIIRDNNQSLLEMSNILLRAEFSLTRSRYSNWIGGNAPIVENSPIVS------LMG 316
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
HPLL+ + + +A PV ID ++ T+VV
Sbjct: 317 FSHPLLIWENKKKQAAK----------------------------PVSIDFHIDRNTKVV 348
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
ITGPNTGGKT ++K LG+A LM+++GL++P+ P +P+ I DIGD QSLE NLST
Sbjct: 349 AITGPNTGGKTVALKGLGIALLMARSGLFIPSIQKPIIPFCPNIFVDIGDDQSLEGNLST 408
Query: 415 FSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
FSGHI RI +ILE ++ + S+VL+DEIGSGTDPSEG ALA ++L+ + + TT
Sbjct: 409 FSGHILRIKNILEALNNKKGFSVVLLDEIGSGTDPSEGTALAIALLKEFAIVSDITLATT 468
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY D+ LK D RFEN + F E+ +P Y + WG G SNAL+I+K IG + KI+ A
Sbjct: 469 HYGDIKALKYSDNRFENVSVAFDEESFKPKYTLNWGIPGRSNALSISKRIGINEKILNNA 528
Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
L+P ++ + + + L EER K + A AA L A L+ EI+++ +
Sbjct: 529 SNY---LKP-KEVENINNIIKGLEEERLKQQKSAEEAAELIARTEILHDEIKNKYEFQKL 584
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE---INSLIKESESAIAAI 648
A ++ E Q++ + + A+ ++ +++ ++Q +A+ ++ I +KE E+
Sbjct: 585 NALKIQEAEKQKLSKHIKEAQKEVINLIKKLKDQ--NATGEDARLIGIRLKEIET----- 637
Query: 649 VEAHRPDDDFSVSETN-TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
D + S T+S++P+ G+ + +KSL ++++ + V+ G R
Sbjct: 638 -------DHLTQSNVERTTSWSPKIGDFIKIKSLNSS-GQIIDIDEKAKSYEVKCGSFRS 689
Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 767
+ N+ + K P+ + Q S E+ S+ +++TSKN++D+R
Sbjct: 690 TLSINDFEGLNGEK--------PKFKDSQI-----QISSVREDFSFS-KIRTSKNTIDVR 735
Query: 768 GMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPM 825
GMRV EA ++ I + L+++HG+GTG +K+ + L + V K E + +
Sbjct: 736 GMRVHEA--EIIIEEKFKKFHGPLWIVHGIGTGKLKKGLRLWLSSLNYVDKVEDAENNEG 793
Query: 826 NYGCTVAYIK 835
GC++A+IK
Sbjct: 794 GAGCSIAWIK 803
>gi|148267636|ref|YP_001246579.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JH9]
gi|150393691|ref|YP_001316366.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus JH1]
gi|229486378|sp|A6U0W1.1|MUTS2_STAA2 RecName: Full=MutS2 protein
gi|229486379|sp|A5IS30.1|MUTS2_STAA9 RecName: Full=MutS2 protein
gi|147740705|gb|ABQ49003.1| MutS2 family protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946143|gb|ABR52079.1| MutS2 family protein [Staphylococcus aureus subsp. aureus JH1]
Length = 782
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 403/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L +I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVTEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|7387927|sp|Q9ZEH5.1|MUTS2_STAAU RecName: Full=MutS2 protein
gi|3776110|emb|CAA11403.1| MutS-like protein [Staphylococcus aureus]
Length = 719
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 237/811 (29%), Positives = 403/811 (49%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 2 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 59
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 60 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 117
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 118 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 172
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 173 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 231
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 232 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 258
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 259 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 310
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 311 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 370
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 371 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 430
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E + +S Y+ + +R +L+ + A +H
Sbjct: 431 DISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHD 490
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
++ Y++ ++ K L A ++ Q++ A + D +++D QLR+ +
Sbjct: 491 DLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLREQKGAD 542
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + R DD + + ++ G++V V S G K V
Sbjct: 543 ----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQK-GEV 593
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 594 LEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--------- 637
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R E+A +LD L A + +++IHG GTG +++ V
Sbjct: 638 ---------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 688
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V+ + P +G TVA +K
Sbjct: 689 QQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 719
>gi|418906080|ref|ZP_13460107.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC345D]
gi|377765380|gb|EHT89230.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC345D]
Length = 782
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 237/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ S++ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSKLNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418280914|ref|ZP_12893736.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21178]
gi|365167015|gb|EHM58492.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21178]
Length = 782
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PISKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|417891970|ref|ZP_12536027.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21200]
gi|341851256|gb|EGS92185.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21200]
Length = 782
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 237/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET ++ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--LIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGTALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQKHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|257425195|ref|ZP_05601621.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257427858|ref|ZP_05604256.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257430493|ref|ZP_05606875.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 68-397]
gi|257433255|ref|ZP_05609613.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus E1410]
gi|257436094|ref|ZP_05612141.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus M876]
gi|282910719|ref|ZP_06318522.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913919|ref|ZP_06321706.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M899]
gi|282918842|ref|ZP_06326577.1| MutS2 protein [Staphylococcus aureus subsp. aureus C427]
gi|282923964|ref|ZP_06331640.1| MutS2 protein [Staphylococcus aureus subsp. aureus C101]
gi|293526498|ref|ZP_06671183.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M1015]
gi|417889008|ref|ZP_12533107.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21195]
gi|257272171|gb|EEV04303.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 55/2053]
gi|257274699|gb|EEV06186.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 65-1322]
gi|257278621|gb|EEV09240.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 68-397]
gi|257281348|gb|EEV11485.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus E1410]
gi|257284376|gb|EEV14496.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus M876]
gi|282313936|gb|EFB44328.1| MutS2 protein [Staphylococcus aureus subsp. aureus C101]
gi|282316652|gb|EFB47026.1| MutS2 protein [Staphylococcus aureus subsp. aureus C427]
gi|282321987|gb|EFB52311.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M899]
gi|282325324|gb|EFB55633.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WBG10049]
gi|290920570|gb|EFD97633.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus M1015]
gi|341853076|gb|EGS93958.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21195]
Length = 782
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 237/811 (29%), Positives = 403/811 (49%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E + +S Y+ + +R +L+ + A +H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
++ Y++ ++ K L A ++ Q++ A + D +++D QLR+ +
Sbjct: 554 DLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLREQKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + R DD + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 657 LEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R E+A +LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V+ + P +G TVA +K
Sbjct: 752 QQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|258423813|ref|ZP_05686699.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9635]
gi|418888936|ref|ZP_13443072.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1524]
gi|257846045|gb|EEV70073.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9635]
gi|377754446|gb|EHT78355.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1524]
Length = 782
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 237/816 (29%), Positives = 405/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET ++ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--LIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQKHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|251795420|ref|YP_003010151.1| MutS2 family protein [Paenibacillus sp. JDR-2]
gi|247543046|gb|ACT00065.1| MutS2 family protein [Paenibacillus sp. JDR-2]
Length = 789
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 246/811 (30%), Positives = 396/811 (48%), Gaps = 112/811 (13%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI+ L+ A G L+P+E+ + T R V K + D+L P+ L +
Sbjct: 70 DISASLHRARIGGTLNPAELLDIAATARGARRVKKHI--------DNLHEDDPIPLLFQM 121
Query: 106 CNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ 162
L+E LE+ I CID + + +D AS +L IR R + + +S +++ Q+ +
Sbjct: 122 TEQLSEHKPLEDAIFDCIDDQAEV-MDSASPELASIR----RELRSGESRIREKLEQMIR 176
Query: 163 AGGIDKPL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ + K L IT R R + +K ++ GI + S SGAT F+EP+ V NN
Sbjct: 177 SSSVQKMLQDSIITLRNDRYVIPVKQEYRSHF-GGIVHDQSGSGATLFIEPEAIVSMNNK 235
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
+E+ E IL LTA A+ ++ Y D + ++D A+A+A A M P +
Sbjct: 236 LRETKAAELREIEKILQKLTARAAEHVEDLLYNQDLLGKLDFAYAKARLAHEMKATLPRM 295
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
+ + + I+ +HPL+ D
Sbjct: 296 NDRGF------LKIKRGRHPLI-----------------------------------APD 314
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VP+D+++ + +++TGPNTGGKT S+KT+GL SLM+ +GL++PA +L FD I
Sbjct: 315 KVVPLDVELGNQFTAIIVTGPNTGGKTVSLKTVGLLSLMAMSGLFVPADEGSQLCVFDSI 374
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQ+LSTFS H++ I+ IL ++ +SLVL+DE+G+GTDP+EG ALA +IL+
Sbjct: 375 YADIGDEQSIEQSLSTFSSHMTNIIRILGSMTSKSLVLLDELGAGTDPAEGSALAIAILE 434
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
++ + TTHY++L NA+ EF + TL PTYR+L G G SNA IA
Sbjct: 435 HIHKLDSRIIATTHYSELKAYAYNRKGVINASMEFDVATLSPTYRLLVGVPGRSNAFAIA 494
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
+ +G + II A+ V + R + SL E+R ES+ TA S+ E+
Sbjct: 495 ERLGLSQAIIDHARGEV-----SEEDQRVENMIASLEEDRLSAESERNTAESMRREMEAQ 549
Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
+ E E + + + + K ++ + + A+ + D ++ D LR + +E S +
Sbjct: 550 RKRHEAELERFEEQRDKMLQKAQEEAHEAVAKARREADQIIAD----LRKLALEEGAS-V 604
Query: 639 KESESAIAAIVEAHR----PDDDFSVSETNTSSFTPQ------FGEQVHVKSLGDKLATV 688
KE + ++EA R + + + ++ + G++V V SL K V
Sbjct: 605 KEHK-----LIEAKRRLEEAAPELATKKKRSAGGGAKKPAKIGAGDEVMVYSLNQK-GIV 658
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
E+ D T VQ G M+++V +++ I P +L KQQ +Q+ S S
Sbjct: 659 AEIGASDAT--VQLGIMKMKVALDDLELI---------KPVAQLNKQQP-KQTASLKRSK 706
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
E+ + + LDLRG +EEA ++D L + +++IHGMGTGV++ +
Sbjct: 707 ED--------SLRMELDLRGANLEEAIIEVDRFLDESYLGGLGQVYIIHGMGTGVLRAGI 758
Query: 807 LEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+ LR H V Y + G TVA +K
Sbjct: 759 QQYLRKHSLVKTYRLGKYGEGGAGVTVAELK 789
>gi|82750751|ref|YP_416492.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus RF122]
gi|123549011|sp|Q2YXD1.1|MUTS2_STAAB RecName: Full=MutS2 protein
gi|82656282|emb|CAI80696.1| DNA mismatch repair protein [Staphylococcus aureus RF122]
Length = 782
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 403/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + + V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEHVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSCNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|427394069|ref|ZP_18887571.1| MutS2 family protein [Alloiococcus otitis ATCC 51267]
gi|425730239|gb|EKU93079.1| MutS2 family protein [Alloiococcus otitis ATCC 51267]
Length = 793
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 240/835 (28%), Positives = 409/835 (48%), Gaps = 104/835 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
S+EE + LLNQT +++++ + + ++ E I L G L+ EI ++ + ++
Sbjct: 42 SIEEIKMLLNQTGDGVSLLRMKGGIPVTPFESILPQLKRLSIGGGLNGGEIASIMKIIKN 101
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ EA E D L+ + ++L N L++L + I +D ++ D AS
Sbjct: 102 AREIKNFFREAQE-DDIVLENLYAVSDML---NPLSDLSKTIQAVVDEDGRVV-DSASPK 156
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L+ IR K+ +++ L+ + + ++ + +IT R R V +KA K + GI
Sbjct: 157 LKGIRTGIKQVEQSIRQKLENIT-RGSKSRYLTDAIITIRNDRYVVPVKADSKNVFG-GI 214
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ S++G T F+EP+ + NN ++ E AE +L+ L+ +I ++++ +
Sbjct: 215 VHDQSATGQTLFVEPQSVLNQNNKLKEYTSQEKAEVDRLLADLSQKITPYSKDLEQDLQV 274
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D A+A +++ + PI V + I + G +HPL+
Sbjct: 275 LTLLDFIAAKAKYSRQLSASQPI------VDDNREIALYGARHPLI-------------- 314
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
+P D V DI + + + +V+TGPNTGGKT +KTLGL
Sbjct: 315 -DP--------------------DQVVENDITLGLDYKAIVVTGPNTGGKTVVLKTLGLL 353
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+M ++GL+LP K++ R+ F+ ADIGD QS+EQ+LSTFS H++ IV IL + +L
Sbjct: 354 QIMGQSGLHLPVKDNSRIGVFEKCYADIGDEQSIEQSLSTFSSHMTNIVSILSDIDEATL 413
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+++DE+G+GTDP EG ALA +IL Y+ R V+T+HY +L NA+ F
Sbjct: 414 IVLDELGAGTDPQEGAALAIAILDYISARGSTVVITSHYPELKAYAYNRPETINASMAFD 473
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKII-----------QRAQKLVERLRPERQ 543
+ +L+PTY++L G G SNA +A+ +G + +II Q +++E L +RQ
Sbjct: 474 VNSLKPTYKLLLGIPGRSNAFEVAQRLGLNNEIIAASKQLMSGESQSVNQMIEDLEAKRQ 533
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
+ K QSL +E A+ LH ++ + Y ++ +++L+ +A K K +
Sbjct: 534 AYHKRN--QSLQKE-------LYDASKLHNDLKNFYEAYQERSQELEDKA---KDKANRI 581
Query: 604 VQQELNFAKVQIDTVVQDF-ENQLRDASADEINSL-IKESESAIAAIVEAHRPDDDFSVS 661
V++ A+ Q D ++ D + QL S D I +++S ++ + + V
Sbjct: 582 VEK----AQEQADQIIDDLRQKQLNQPSEDNIKEHEFIDAKSRLSNMKYEQKHLKQNKVL 637
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
+ G+QVHV S D+ T+V+ GD V VQ G +++++ + ++ + K
Sbjct: 638 QKEKEKKALAVGDQVHVDSF-DQEGTLVDQTGDSKWV-VQMGMLKMKIDEEDLTLLEKGK 695
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 779
K A A LR V + K +DLRG RV++A H+LD
Sbjct: 696 SKQATKQANSLR---------------------ANVGSVKTEIDLRGERVDQAVHRLDQY 734
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
I A + + VIHGMGTG V++ V + L H RV Y ++P N G A I
Sbjct: 735 IDQALLANYGTVTVIHGMGTGAVRKAVKDYLSKHKRVQSY-NDAPANQGGNGATI 788
>gi|253733620|ref|ZP_04867785.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TCH130]
gi|253728419|gb|EES97148.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus TCH130]
Length = 782
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 237/816 (29%), Positives = 402/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ ++ K+K P + +Q
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKLSIEDLE----KKQKEKVKPTKMVTRQNR------ 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|253317073|ref|ZP_04840286.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|257795126|ref|ZP_05644105.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9781]
gi|258407166|ref|ZP_05680315.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9763]
gi|258421743|ref|ZP_05684664.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9719]
gi|258432913|ref|ZP_05688602.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9299]
gi|258443403|ref|ZP_05691746.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A8115]
gi|258446076|ref|ZP_05694238.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A6300]
gi|258449811|ref|ZP_05697909.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus A6224]
gi|258454910|ref|ZP_05702873.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5937]
gi|269202756|ref|YP_003282025.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus ED98]
gi|282894171|ref|ZP_06302402.1| MutS2 protein [Staphylococcus aureus A8117]
gi|282928666|ref|ZP_06336263.1| MutS2 protein [Staphylococcus aureus A10102]
gi|295405948|ref|ZP_06815757.1| MutS2 protein [Staphylococcus aureus A8819]
gi|296275631|ref|ZP_06858138.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MR1]
gi|297246508|ref|ZP_06930346.1| MutS2 protein [Staphylococcus aureus A8796]
gi|384864370|ref|YP_005749729.1| mutS2 protein [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|387150285|ref|YP_005741849.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
04-02981]
gi|415694454|ref|ZP_11455905.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS03]
gi|417652169|ref|ZP_12301922.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21172]
gi|417801420|ref|ZP_12448510.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21318]
gi|417894614|ref|ZP_12538628.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21201]
gi|418424284|ref|ZP_12997408.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS1]
gi|418427274|ref|ZP_13000288.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS2]
gi|418430119|ref|ZP_13003036.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS3a]
gi|418433078|ref|ZP_13005860.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS4]
gi|418436753|ref|ZP_13008557.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS5]
gi|418439625|ref|ZP_13011334.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS6]
gi|418442676|ref|ZP_13014279.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS7]
gi|418445736|ref|ZP_13017214.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS8]
gi|418448680|ref|ZP_13020074.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS9]
gi|418451504|ref|ZP_13022839.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS10]
gi|418454561|ref|ZP_13025824.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11a]
gi|418457435|ref|ZP_13028640.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11b]
gi|418568086|ref|ZP_13132440.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21272]
gi|418638918|ref|ZP_13201191.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-3]
gi|418653778|ref|ZP_13215707.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-99]
gi|418663441|ref|ZP_13224959.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-122]
gi|418877992|ref|ZP_13432227.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1165]
gi|418880818|ref|ZP_13435037.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1213]
gi|418883745|ref|ZP_13437942.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1769]
gi|418886403|ref|ZP_13440552.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1150]
gi|418894761|ref|ZP_13448858.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1057]
gi|418914239|ref|ZP_13468211.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418920218|ref|ZP_13474151.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC348]
gi|418931206|ref|ZP_13485048.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1750]
gi|418991004|ref|ZP_13538665.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1096]
gi|419785786|ref|ZP_14311533.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-M]
gi|424777696|ref|ZP_18204655.1| MutS2 family protein [Staphylococcus aureus subsp. aureus CM05]
gi|443635753|ref|ZP_21119875.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21236]
gi|257789098|gb|EEV27438.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9781]
gi|257841321|gb|EEV65766.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9763]
gi|257842076|gb|EEV66504.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9719]
gi|257849353|gb|EEV73330.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A9299]
gi|257851493|gb|EEV75432.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A8115]
gi|257855134|gb|EEV78075.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A6300]
gi|257856731|gb|EEV79634.1| DNA mismatch repair MutS2 protein [Staphylococcus aureus A6224]
gi|257862790|gb|EEV85555.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus A5937]
gi|262075046|gb|ACY11019.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus ED98]
gi|282589705|gb|EFB94791.1| MutS2 protein [Staphylococcus aureus A10102]
gi|282763657|gb|EFC03786.1| MutS2 protein [Staphylococcus aureus A8117]
gi|285816824|gb|ADC37311.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
04-02981]
gi|294969383|gb|EFG45403.1| MutS2 protein [Staphylococcus aureus A8819]
gi|297176614|gb|EFH35877.1| MutS2 protein [Staphylococcus aureus A8796]
gi|312829537|emb|CBX34379.1| mutS2 protein [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128541|gb|EFT84546.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS03]
gi|329725189|gb|EGG61678.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21172]
gi|334276778|gb|EGL95028.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21318]
gi|341851798|gb|EGS92707.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21201]
gi|371980768|gb|EHO97969.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21272]
gi|375017989|gb|EHS11584.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-99]
gi|375019967|gb|EHS13510.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-3]
gi|375034089|gb|EHS27264.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-122]
gi|377694114|gb|EHT18479.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1165]
gi|377695625|gb|EHT19985.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1057]
gi|377715039|gb|EHT39236.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1750]
gi|377715479|gb|EHT39669.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1769]
gi|377723126|gb|EHT47251.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1096]
gi|377726585|gb|EHT50696.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1150]
gi|377731711|gb|EHT55764.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1213]
gi|377757741|gb|EHT81629.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377765577|gb|EHT89426.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC348]
gi|383361993|gb|EID39352.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-M]
gi|387719184|gb|EIK07136.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS3a]
gi|387719344|gb|EIK07293.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS2]
gi|387720694|gb|EIK08597.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS1]
gi|387725944|gb|EIK13535.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS4]
gi|387728283|gb|EIK15776.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS5]
gi|387730846|gb|EIK18199.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS6]
gi|387736228|gb|EIK23329.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS8]
gi|387737623|gb|EIK24685.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS7]
gi|387738356|gb|EIK25400.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS9]
gi|387745329|gb|EIK32088.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS10]
gi|387746022|gb|EIK32767.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11a]
gi|387747993|gb|EIK34692.1| MutS2 protein [Staphylococcus aureus subsp. aureus VRS11b]
gi|402346376|gb|EJU81466.1| MutS2 family protein [Staphylococcus aureus subsp. aureus CM05]
gi|408423364|emb|CCJ10775.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408425354|emb|CCJ12741.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408427342|emb|CCJ14705.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408429329|emb|CCJ26494.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408431317|emb|CCJ18632.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408433311|emb|CCJ20596.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408435302|emb|CCJ22562.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|408437287|emb|CCJ24530.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST228]
gi|443408812|gb|ELS67323.1| MutS2 family protein [Staphylococcus aureus subsp. aureus 21236]
Length = 782
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 403/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L +I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|401565428|ref|ZP_10806266.1| MutS2 family protein [Selenomonas sp. FOBRC6]
gi|400187177|gb|EJO21373.1| MutS2 family protein [Selenomonas sp. FOBRC6]
Length = 785
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 254/831 (30%), Positives = 393/831 (47%), Gaps = 114/831 (13%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
++ IP G +E +L +T+ A+ + Q Q I D+ IL A +L E+ +
Sbjct: 32 RSVIPSG-DYDEVVRLHAETAEAVQIQQMQSPPFGGIYDLRVILKKATMSSVLELDELRS 90
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ T+ + NV D +Q S L ++ + L LE + ID +
Sbjct: 91 IMSTMGGMRNVKYFFR-------DLVQDVSLLKDMARPIEILGTLERHLRDTID-EHGNF 142
Query: 128 LDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
D AS +L I E + R + L ++L A Q + + ++T R R + +K
Sbjct: 143 RDDASPELRRITRELHTAQARVKDRLSAILHDAANQKY----FQEAIVTVRDERYVIPVK 198
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
++ P G+ + SSSGAT F+EP VE NN+ ++ + E IL L+ EIA+
Sbjct: 199 QEYRNYFP-GVIHDQSSSGATLFVEPLATVELNNIVRQMGLAREQEIQRILQKLSGEIAQ 257
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
S + + + EIDL FARAG A+ M+ P L+ D + ++ +HPLL
Sbjct: 258 SAAILAENCEILAEIDLIFARAGLAREMEAYPPTLNR------DGIVQLKRARHPLL--- 308
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
SK D VPIDI++ +++ITGPNTGG
Sbjct: 309 -----------------------------SK---DKVVPIDIELGKNFSILLITGPNTGG 336
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT SMKTLGL +L++++G +LP LP + I ADIGD QS+EQ+LSTFS H IV
Sbjct: 337 KTVSMKTLGLLALLAQSGCFLPTAPDSELPVYPNIYADIGDEQSIEQSLSTFSAHTRNIV 396
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
I++ + L+L+DE+G+GTDP EG ALA SI+++ R + TTHYA L
Sbjct: 397 RIIDKAQQGDLILLDEVGAGTDPDEGAALARSIIEHFLQRDIAVLATTHYAALKTYAYTQ 456
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
T ENA+ EF L+TLRPTYR+L G G SNA +I++ +G ++I+ RA+ V +
Sbjct: 457 TGVENASVEFDLKTLRPTYRLLIGIPGASNAFSISRQLGLPQEIVARAEIYVN------E 510
Query: 544 QHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+H E + L +E++ E + R EI + + E + L L K +
Sbjct: 511 EHTHFERVVNELEQEKKDYEIRNRVLYDKEREITAVEARLRSERETLAASRQELLHKARE 570
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAH--------- 652
+ + A+ + ++ ++Q D E I+E+ + + A V A
Sbjct: 571 EANNIVREARRSAEETIKSLKDQFDDHGVKERRKAIQEARNRLDEAYVPARTVRSTPVGK 630
Query: 653 --RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
RPDD Q G+ V++ SL + TV+ V G + + VQ G +R VK
Sbjct: 631 PMRPDD-------------IQTGDIVYIDSLAQE-GTVLSVQGHE--LAVQVGGLRTIVK 674
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
+ R + KRK P ++R +A S + A P++ D+RGM
Sbjct: 675 MSACRFV---KRKAQKPPVEKVRV--------AASISRKAAEIRPQI-------DVRGMT 716
Query: 771 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
V EA L I A + S + +IHG GTG +++ + E L++H V +
Sbjct: 717 VSEAESVLGKFIDDAVFTGLSKILLIHGKGTGALRQGLQEYLKHHRSVLSF 767
>gi|418655590|ref|ZP_13217441.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-105]
gi|375036341|gb|EHS29416.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-105]
Length = 782
Score = 295 bits (756), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 404/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKYSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|293509911|ref|ZP_06668620.1| MutS2 protein [Staphylococcus aureus subsp. aureus M809]
gi|291467361|gb|EFF09878.1| MutS2 protein [Staphylococcus aureus subsp. aureus M809]
Length = 782
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 237/811 (29%), Positives = 403/811 (49%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVALKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E + +S Y+ + +R +L+ + A +H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
++ Y++ ++ K L A ++ Q++ A + D +++D QLR+ +
Sbjct: 554 DLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLREQKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + R DD + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 657 LEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R E+A +LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V+ + P +G TVA +K
Sbjct: 752 QQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|295094560|emb|CBK83651.1| MutS2 family protein [Coprococcus sp. ART55/1]
Length = 821
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 224/707 (31%), Positives = 346/707 (48%), Gaps = 96/707 (13%)
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS L+ +R ++ E L + L K+ + + L+T R R C+ +KA +K
Sbjct: 178 DDASSGLKAVRRNKRLTNEKLHNQLAKLVSDTSKQTMFQDNLVTMRNGRYCIPVKAEYKN 237
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
P G+ + SS+GAT F+EP V NN L N E+AE IL L+A+ A I
Sbjct: 238 HFP-GMIHDQSSTGATVFIEPMAIVNLNNELKELDNQELAEIEKILESLSAQTAAEIEYI 296
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
KY D + E+D FARA FA+ G PI ++ D ++I+ +HPLL
Sbjct: 297 KYDFDTLAELDFIFARASFARSYKGTEPIFNT------DGIVDIKQGRHPLL-------- 342
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ TV VP+DIK+ + ++++TGPNTGGKT S+
Sbjct: 343 ----------------EKHTV-----------VPVDIKLGEDYNLLIVTGPNTGGKTVSL 375
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL SLM ++GL++PA + RL FD + ADIGD QS+EQNLSTFS H+S IV IL+
Sbjct: 376 KTLGLFSLMGQSGLHIPALDGSRLNVFDDVFADIGDEQSIEQNLSTFSSHMSNIVYILDH 435
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V+ SLVL DE+G GTDP EG ALA +IL +L + + TTHY++L EN
Sbjct: 436 VTPGSLVLFDELGGGTDPIEGAALAIAILSHLNNMGVRCMATTHYSELKTFAMSTPGVEN 495
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF + TL+PTY+++ G G SNA IAK +G D II+ A+ ++ + +
Sbjct: 496 ASCEFDVATLQPTYKLMIGIPGKSNAFAIAKKLGIDDSIIESAKANIDSDTVDFET---- 551
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
L L +R++E A L + L + + +L + A + AK Q+ + +
Sbjct: 552 -LIADLERSKREIEQDKADIARLKEDAKQLQERAQMKDSELSDKKAEILAKARQEASEII 610
Query: 609 NFAKVQIDTVVQDFENQLRD-ASAD-------------EINSLIKESESAIAAIVEAHRP 654
AK + D ++ + + A AD +IN L K +E + H+
Sbjct: 611 EEAKAEADAAIRKYNKWTTNPAKADAKAMEAERQKLRAKINDLGKMNEEKRKTVKSDHKA 670
Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
DF V G+ VHV S+ D T++ + + VQ G + + ++
Sbjct: 671 -SDFKV------------GDTVHVISM-DSEGTIMALADSKGKLKVQMGIISAALPPTDL 716
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
+ + K+K P+ + + + G S R+ K +++ GM V+EA
Sbjct: 717 LLVEHEKKK------PQ-------KATVTGGKSMN------RMMNIKPEINVLGMTVDEA 757
Query: 775 SHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ +D L A + +IHG GTG +++ + + L++ P V +
Sbjct: 758 TSLVDRFLDDALMAHLHRVTIIHGKGTGALRKGIHQFLKSQPHVKSF 804
>gi|15924134|ref|NP_371668.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus Mu50]
gi|15926728|ref|NP_374261.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus N315]
gi|156979466|ref|YP_001441725.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus Mu3]
gi|255005930|ref|ZP_05144531.2| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|54037877|sp|P65496.1|MUTS2_STAAN RecName: Full=MutS2 protein
gi|54041518|sp|P65495.1|MUTS2_STAAM RecName: Full=MutS2 protein
gi|229486377|sp|A7X169.1|MUTS2_STAA1 RecName: Full=MutS2 protein
gi|13700944|dbj|BAB42240.1| MutS-like protein [Staphylococcus aureus subsp. aureus N315]
gi|14246914|dbj|BAB57306.1| MutS-like protein [Staphylococcus aureus subsp. aureus Mu50]
gi|156721601|dbj|BAF78018.1| MutS-like protein [Staphylococcus aureus subsp. aureus Mu3]
Length = 782
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 237/816 (29%), Positives = 403/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L +I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFHQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ +L+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERVLTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418951998|ref|ZP_13504057.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-160]
gi|375370325|gb|EHS74140.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-160]
Length = 782
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 235/811 (28%), Positives = 401/811 (49%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V + +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVANTIEF 325
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 326 MEDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E + +S Y+ + +R +L+ + A +H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDCLVKEAEQVHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
++ Y++ ++ K L A ++ Q++ A + D +++D QLR+ +
Sbjct: 554 DLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLREQKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + R DD + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 657 LEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R E+A +LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V+ + P +G TVA +K
Sbjct: 752 QQHLKKHKCVSDFRGGMPSEGGFGVTVATLK 782
>gi|449017364|dbj|BAM80766.1| DNA mismatch repair protein MutS, chloroplast precursor
[Cyanidioschyzon merolae strain 10D]
Length = 1029
Score = 295 bits (755), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 232/759 (30%), Positives = 367/759 (48%), Gaps = 121/759 (15%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS++L ++R + +R E + L++ I Q+ G + T R R + +KA+HK
Sbjct: 338 ASDELRVVRTQLQRIKERIKDELQR----IIQSKGDALQDRTPTTRYDRQVLAVKATHKR 393
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P GI + S++G+T F+EP VE N+ RLS E A E I + L+ + + +
Sbjct: 394 RIP-GIVHDYSNTGSTVFVEPHAIVELNSELRRLSRRESAIERDIWNQLSKRLHAASVRL 452
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ +++ID + ARA +A+ + ++ S + D I G HPLLL SL+S+
Sbjct: 453 SSTFEALIDIDFSVARARYARHIGASLVRFAADSEMPVD----IRGACHPLLLWRSLKSM 508
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ VPID + ++TG N GGKT +
Sbjct: 509 ESV-----------------------------VPIDFHLRGIASAAILTGANAGGKTLAA 539
Query: 369 KTLGLASLMSKAGLYLPAKN-HPRL------------PWFDLILADIGDHQSLEQNLSTF 415
KTLGL LM+K+G+ +P ++ P + P+FD +LADIGD QSLEQNLSTF
Sbjct: 540 KTLGLIVLMAKSGIPIPRRHADPNMSPTTLLDEDVTVPYFDRVLADIGDEQSLEQNLSTF 599
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR--VGLAVVTTHY 473
SGHI RI +IL+ + +SLVL+DE+G+GTDP+EG AL ++++YL ++ V VTTH+
Sbjct: 600 SGHIRRIGEILQCATADSLVLLDELGAGTDPAEGAALGIALVRYLVEKKNVRFVFVTTHH 659
Query: 474 ADLSCLKDKD-TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
++L L + +R+EN + EF + L PTYR+LWG G S AL +A+ +G D I+Q A+
Sbjct: 660 SELKTLFFMEPSRYENVSVEFDTDRLEPTYRLLWGVAGRSYALLVARRLGLDHDILQEAE 719
Query: 533 KLVER-----------LRPERQQHRKSELYQSLMEERRKLE-------SQARTAASLHAE 574
L+ER + LME+ K+ +AR A
Sbjct: 720 NLLERSVGVGSSPDSLPLSPGSGSSSPQNMSRLMEQVEKIRVEQLQNLERARQEA----- 774
Query: 575 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-----DA 629
RE+E ++ ++R A L+ + +++ + +++ V Q+ L+ +
Sbjct: 775 -----REMERMRQEHEKRLAGLERHRKEAIEEVKRALEAELEQVRQELREALQRLRRNEM 829
Query: 630 SADEINSLIKESESAIA----AIVEAHRPDD---DFSVSETNTSSFTPQFGEQVHVKSLG 682
++ E N+L E+ +A A+ R DD + +TN P+ G
Sbjct: 830 ASSEGNTLANTLEAKVAEATMALAGLERDDDREINPETVDTNDYVMVPKLG--------S 881
Query: 683 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI----RPIPNSKRKNAANPAPRLRKQQED 738
L ++P D + V G + + + RP S A +PR R + E
Sbjct: 882 SPLRVTQKLP--DGRIRVALGNLTATIAVQEVVSVQRPTEAST-TMATERSPRRRVEAEK 938
Query: 739 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMG 798
SG S V+T +N++DLRGMR E LD A+ L++IHG G
Sbjct: 939 PASG--------LSSPVLVRTDRNTVDLRGMRAHEVESALDSAIDRSVQMGSLWIIHGHG 990
Query: 799 TGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 835
+G +K V E LR HP V +++ SP + G TVA ++
Sbjct: 991 SGRLKSVVREYLRGHPHVDSFQEASPSDGGSGVTVAVLR 1029
>gi|406669612|ref|ZP_11076880.1| MutS2 family protein [Facklamia ignava CCUG 37419]
gi|405582954|gb|EKB56928.1| MutS2 family protein [Facklamia ignava CCUG 37419]
Length = 786
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 249/844 (29%), Positives = 410/844 (48%), Gaps = 94/844 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQ 58
MGH V Q+P K E Q+LL++T + ++ S P L + I ++ + G
Sbjct: 27 MGHQFVSD-QLPQTKQ-ETIQRLLDETEEVVRIL-SLPATLPIPRISNVRESIKRVEIGA 83
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
L+ E+ + + L + + + ++ E + Q + L E ++ L E+E++I
Sbjct: 84 RLNGKELAELGKLLSTTSQLVRFFSQLEENN----QFFPQLNEWVQKIVSLPEIEQRIDQ 139
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
+D IILD AS +L IR + R +++ L + +A + LIT R R
Sbjct: 140 TVDSDG-IILDTASSELNRIRRAQLRTEQSIRETLNTIIKS--KANLLSDTLITIRNQRY 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
+ +K ++ G + SS+G T F+EP+ NN L + E E IL +T
Sbjct: 197 VIPVKTDYRAQF-KGTVYDQSSTGQTLFIEPQSVTNLNNQLAALRSEEKVEVDRILDEVT 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
++ EI + +D ARA ++ ++G P LS + V I +HP
Sbjct: 256 EQLLPYLSEINQNHYALGYLDYVQARAEYSLAIEGTKPTLSPEREV------RIWQARHP 309
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
L+ +P K V N DI + + + ++ITG
Sbjct: 310 LI---------------DP-KQIVAN-------------------DILIGGDYQSLIITG 334
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT +KTLG+ +M ++GLY+PA+ ++ FD + ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTILLKTLGMLQIMGQSGLYIPAEEASQIGIFDQVYADIGDEQSIEQNLSTFSSH 394
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV I++ + +SL+L+DE+GSGTDP EG ALA +IL Y + + + TTHY +L
Sbjct: 395 MTNIVSIIQRATYQSLILLDELGSGTDPQEGAALAMAILDYFQSVGSIVLATTHYPELKV 454
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
+ +NA+ EF+ +TL PTYR+L G G SNAL I+K +G II++AQ V++
Sbjct: 455 YANHAANTQNASMEFNDQTLSPTYRLLIGIPGRSNALEISKRLGLRSDIIEKAQSGVQQ- 513
Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
E QQ +++ L +ERR++E + + + L ++DE + L A
Sbjct: 514 --ESQQ--LNDMVMQLDQERREMEEEHQQTQRYLDDAQTLLDRLKDEYQQWLNAKEDLMA 569
Query: 599 KETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINS-LIKESESAIAAIVEAHRPDD 656
+ ++ Q + K + + ++ D + QL +S I E++ + + E R
Sbjct: 570 QAKREANQYIEAKKEEAEKIISDIRDLQLEQSSQQPIKEHTFIENKKRLGDLTEPERLKK 629
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
+ V + + G++V V + + T+VE+P + + VQ G M+++V + ++
Sbjct: 630 N-KVLQRAKKQQRIEVGDEVEVLAYQQR-GTIVEIPSSKEYI-VQMGVMKMKVAASEVKL 686
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ + P RL Q R +GS S+ SLDLRG R + A
Sbjct: 687 L------ESVEPQRRLNVQ---RHAGSKVST---------------SLDLRGERFDAALR 722
Query: 777 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY---GCTV 831
+L L A + ++ +IHG GTG +++ V + L NHP+V ++E SP N G T+
Sbjct: 723 RLSQYLDQALLSNHPMVTIIHGKGTGALRKGVQQALANHPQVERFEY-SPPNAGGDGSTI 781
Query: 832 AYIK 835
Y K
Sbjct: 782 VYFK 785
>gi|386728823|ref|YP_006195206.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
71193]
gi|387602416|ref|YP_005733937.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478481|ref|YP_006709911.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
08BA02176]
gi|418309746|ref|ZP_12921297.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21331]
gi|418978614|ref|ZP_13526414.1| MutS [Staphylococcus aureus subsp. aureus DR10]
gi|283470354|emb|CAQ49565.1| MutS2 protein [Staphylococcus aureus subsp. aureus ST398]
gi|365237869|gb|EHM78708.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21331]
gi|379993438|gb|EIA14884.1| MutS [Staphylococcus aureus subsp. aureus DR10]
gi|384230116|gb|AFH69363.1| MutS [Staphylococcus aureus subsp. aureus 71193]
gi|404439970|gb|AFR73163.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
08BA02176]
Length = 782
Score = 295 bits (755), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 404/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKRADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRVGMPSEGGFGVTVATLK 782
>gi|418563215|ref|ZP_13127657.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21262]
gi|371971759|gb|EHO89155.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21262]
Length = 782
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 237/811 (29%), Positives = 402/811 (49%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E + +S Y+ + +R +L+ + A +H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDCLVKEAEQVHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
++ Y++ ++ K L A ++ Q++ A + D +++D QLR+ +
Sbjct: 554 DLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLREQKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + R DD + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKRLDDHYEAKSIKQNIQKQKYDKIVAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 657 LEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R E+A +LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V+ + P +G TVA +K
Sbjct: 752 QQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|384867975|ref|YP_005748171.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH60]
gi|312438480|gb|ADQ77551.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus TCH60]
Length = 782
Score = 295 bits (754), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 403/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D + + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDKEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|282916393|ref|ZP_06324155.1| MutS2 protein [Staphylococcus aureus subsp. aureus D139]
gi|283770204|ref|ZP_06343096.1| MutS2 protein [Staphylococcus aureus subsp. aureus H19]
gi|282319833|gb|EFB50181.1| MutS2 protein [Staphylococcus aureus subsp. aureus D139]
gi|283460351|gb|EFC07441.1| MutS2 protein [Staphylococcus aureus subsp. aureus H19]
Length = 782
Score = 295 bits (754), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 237/816 (29%), Positives = 404/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDL-RQLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ +++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNEEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|300856601|ref|YP_003781585.1| DNA mismatch repair MutS-like protein [Clostridium ljungdahlii DSM
13528]
gi|300436716|gb|ADK16483.1| DNA mismatch repair MutS related protein [Clostridium ljungdahlii
DSM 13528]
Length = 786
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 251/818 (30%), Positives = 408/818 (49%), Gaps = 102/818 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+L E ++ L +T AL ++ ++ P + + D+ + A G L P +I + L
Sbjct: 39 NLYEVREHLQETREALKLLVTKGNPPFE--GVYDVRQGIKMAGKGSTLMPGQILKIGAIL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
RA + K +T + + + + + ++ L LE++I I+ + I D+AS
Sbjct: 97 RAARRIQKYITVS-----EDEEHFKIIEDICAGIVPLKNLEDEIFIAIESEDEI-SDKAS 150
Query: 133 EDLELIRAERK-RNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K +N + ++SL++ + + L T R R + +KA +K
Sbjct: 151 SLLYNIRKSLKDKNASVRDRVNSLIRSYSDYL------QDNLYTMRGDRYVLPVKAENKS 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SSSGAT ++EP G V NN L E AE IL+ L+ +I + +
Sbjct: 205 SVP-GLVHDQSSSGATLYIEPMGLVNLNNEIKELKLKEKAEIDRILAELSQQIYDNITVV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ D + E+D FA+A F ++G P +VS + +NI +HPL+
Sbjct: 264 ERDADIIWELDFIFAKAKFGNELNGNIP------NVSENGVVNIIEGRHPLI-------- 309
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ TV VP+D+ + +VITGPNTGGKT ++
Sbjct: 310 ----------------NKKTV-----------VPMDVYIGRNFSCLVITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +M+ +GL +PA+ + + +F + ADIGD QS+EQNLSTFS H++ IV+I+E
Sbjct: 343 KTIGLLHIMALSGLMIPARENSTVGFFTEVFADIGDEQSIEQNLSTFSSHMTNIVNIIEN 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
+SLVL DE+G+GTDP+EG ALA SIL+ LR R V TTHY++L K+ EN
Sbjct: 403 FDEKSLVLFDELGAGTDPTEGAALAVSILENLRKRGCTIVATTHYSELKVYALKNEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR++ G G SNA I+K +G II+ A+ E + + Q
Sbjct: 463 ASVEFDVETLRPTYRLMIGVPGKSNAFEISKRLGLPEFIIEDAR---ENIASDALQF--E 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKETQQVQQ 606
+L QSL E++ K E+ AR A L +E + + E++A L R A + A+ ++ ++
Sbjct: 518 DLIQSLQEKKSKAETFAREAEILKSEAAKIKEKYEEKASKLQNIRDKAIIGAQ--REAKE 575
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP---DDDFSVSET 663
+ +K + D +++D R + ++E+ + +E D+ V E
Sbjct: 576 IIRNSKEEADKILKDMRELERMGYTSSVRHKLEENRKKLKDRLEKTEEKLYDNKNDVGEE 635
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
S + G++V + SL K A V+ P V VQ G M++ VK +R +
Sbjct: 636 LKSV---KEGQEVFIPSLNQK-AVVLSKPDSKGEVQVQAGIMKISVKLKELR----ASSG 687
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL- 782
N+ + +L++ EA R +S S+DLRGM EA++ +D L
Sbjct: 688 NSKSEKKKLKR---------------EAKLNLRNVSS--SVDLRGMDSIEATYTVDKYLD 730
Query: 783 -ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + +IHG GTGV++ + ++L+ H V +
Sbjct: 731 DAYMGGLKEVTIIHGKGTGVLRNSITDMLKKHSHVKNH 768
>gi|374578851|ref|ZP_09651945.1| MutS2 family protein [Desulfosporosinus youngiae DSM 17734]
gi|374414933|gb|EHQ87368.1| MutS2 family protein [Desulfosporosinus youngiae DSM 17734]
Length = 788
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 236/825 (28%), Positives = 391/825 (47%), Gaps = 98/825 (11%)
Query: 24 LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +T A +++ PL + ++I + + G ++ E+ +R TLR + L
Sbjct: 49 LQKTEEAKNLLRGNPLFSVRGSKEIRSYIERCLRGGVIQGEELLEIRDTLRVGRKTKQLL 108
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRA 140
E+ E + L +++ LE++I CI D K + D AS +L A
Sbjct: 109 LESRE-------EFPGLWDIVFPIEPQKVLEDEITRCISEDGK---VADNASPEL----A 154
Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDK----PLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ +R++ L + +++ + G K P+IT+R R + IK ++ P GI
Sbjct: 155 DLRRSINRLQNRIRESLEGTLRNSGYQKMLQDPIITQRSDRYVIPIKQEYRTSFP-GIVH 213
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP V N + E E IL +L+A+I EI L + +
Sbjct: 214 DQSASGATLFIEPMPVVHLGNELREVILKEQREVQRILQMLSAQIEARADEIADLHEALA 273
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++DL A+A + M+ P L + + + +HPL+ G
Sbjct: 274 QLDLVVAKAHLSVTMNAGTPELVAGQQMKLVQA------RHPLISGGV------------ 315
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP+ +++ + +VITGPNTGGKT ++K +GL +
Sbjct: 316 ------------------------VPLSLELGIDFDTLVITGPNTGGKTVALKVVGLMAA 351
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL +PA++ R+ F I ADIGD QS+EQ+LSTFSGH+ IV+I+ SLVL
Sbjct: 352 MNQSGLQIPAESDSRMGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIINRADGRSLVL 411
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP+EG ALA IL L +R V TTHY L + R +NA+ EF E
Sbjct: 412 LDEVGAGTDPTEGAALAMGILAELHERGCRTVSTTHYGALKTFAYETPRVKNASVEFDTE 471
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTYR+L G G SNA IA +G +++++A V ER+ ++L ++L E
Sbjct: 472 TLRPTYRLLIGIPGKSNAFTIAGRLGLSERVLEKANTFV----TEREMQ-VADLIENLGE 526
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
R++E + A + + + +E+++ LD L A + + + K + D
Sbjct: 527 THREIELEKEKAETGRRAVEKQTKALEEKSIRLDEEFELLMAMARDEANELIRGVKREAD 586
Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ--FGE 674
++++ + L+ + + + I+++ I + + D V + + Q G+
Sbjct: 587 AIIEELKAALKKENKQQQD--IEKARQGFHRI--SAKLDHGRQVKRSGSELTADQIMLGQ 642
Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 734
V++ L K VV++P VLVQ G M+V V P L+
Sbjct: 643 TVYMTKLRQK-GQVVKLPNASGEVLVQAGIMKVMV------------------PLTELKL 683
Query: 735 QQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLF 792
QE+++ + S E + + ++ +DLRGM VEE LD + A +++
Sbjct: 684 AQEEKKKVTPKYSREMGIGVRKAEEIRSEIDLRGMLVEEGREALDKYMDDAVLGGIGLIY 743
Query: 793 VIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
VIHG GTG ++ + E LR HP V + + + G TV +K
Sbjct: 744 VIHGKGTGAMRAGIQEFLRGHPHVRSFRLGEYGEGDSGVTVVELK 788
>gi|298243242|ref|ZP_06967049.1| MutS2 family protein [Ktedonobacter racemifer DSM 44963]
gi|297556296|gb|EFH90160.1| MutS2 family protein [Ktedonobacter racemifer DSM 44963]
Length = 816
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 262/864 (30%), Positives = 412/864 (47%), Gaps = 137/864 (15%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L+E+++ L T+ A+ ++ P + + DI +L + +L+PS++ V T+R+
Sbjct: 40 LDEARRRLAYTTEAIRLIDLYPDVGVRGAHDIRPLLVRSSREGILAPSDLVEVLETVRSS 99
Query: 76 NNVWKKLTEAAELDGDSLQ-RYSPLLELL-----KNCNFLTELEEKIGFCIDCKLLIILD 129
V + L D L+ + PLL +L + + +EE + + +LD
Sbjct: 100 LYVARLL--------DKLEPEHYPLLHMLGSDIPQRPQIVRRIEETVSEEGE-----VLD 146
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
AS L +R + + + L L+ + + + +P+IT R R + ++A +
Sbjct: 147 TASPTLRKLRFDIRGASQRLQDRLRSLVGEY--GKHLQEPIITMRNDRYVIPVRAESRGQ 204
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+ GI + SSSGAT F+EP VE NN L E E IL +L+AEI +
Sbjct: 205 V-RGIVHDQSSSGATVFVEPMVVVELNNRIRELQVEERREIERILRVLSAEIGHEAESLT 263
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
++ + E D A++ +A+ PIL+++ I++ +HPLL G
Sbjct: 264 VAVELLAEFDTYLAKSRYARMTSASEPILNAEGR------IDLHNARHPLLTGKV----- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
VP + + E +VVITGPNTGGKT ++K
Sbjct: 313 -------------------------------VPTNFYLGREFHMVVITGPNTGGKTVALK 341
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE-- 427
T+GL +LM+++G+++PA H + F+ +LADIGD QS+EQ+LSTFS H+SRI+DIL
Sbjct: 342 TVGLLTLMAQSGMHIPADVHSEIAVFEDVLADIGDEQSIEQSLSTFSSHMSRIIDILRRV 401
Query: 428 ------------------LVSRES---LVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
LV R++ LVL DE+G+GTDPSEG ALA +IL YL +R
Sbjct: 402 EAVQQQDVPDIHGRLAETLVKRQNHHVLVLFDELGAGTDPSEGSALARAILSYLLERKVS 461
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
V TTHY +L + NA+ EF++ETL PTY++ G G SNAL IA +G D
Sbjct: 462 TVATTHYTELKAFAYEQPGVVNASVEFNVETLSPTYKLSIGLPGRSNALAIATRLGLDEP 521
Query: 527 IIQ-----------RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
II+ R + L+E L+ ERQ + S+ ER + E Q + +
Sbjct: 522 IIESSRQFLGSSGVRMENLLEGLQSERQAASDERYHLSM--ERAEAEYQRKQLQEERHRL 579
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID--TVVQDFENQLRDASADE 633
+ +I ++A+ RR E +VQ +L + D +V ++ NQ RD +
Sbjct: 580 EEERVKIINQARAQARR-------ELDEVQNKLAKIRATADRASVSRERLNQARDTA--- 629
Query: 634 INSLIKESESAIAAIVEAHRP-DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
+ E +A + E +P +D +V + Q G+ V V S G +LA +V +
Sbjct: 630 -----RHLEDKVALVPEPAQPRKEDPAVQRLDGPL---QLGDTVRVLSFG-QLAELVGLS 680
Query: 693 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 752
D + VQ G MR RV +NI + SKR+ + K++E SA S
Sbjct: 681 PDHSSAEVQMGSMRFRVDVDNIERV--SKRQAS--------KEREKSVIPSA-PSIVMPR 729
Query: 753 YGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEIL 810
Y R S LD+RG RVE+A +L+ L A +++ ++HG GTG ++ V + L
Sbjct: 730 YEDRPAVSMQ-LDMRGWRVEDALEELETYLNDATMAGLALVRILHGKGTGALRSAVRQQL 788
Query: 811 RNHPRVAKYEQESPMNYGCTVAYI 834
+HP V + +P G V +
Sbjct: 789 SHHPLVKSFNSAAPQEGGDGVTVV 812
>gi|402570749|ref|YP_006620092.1| MutS2 family protein [Desulfosporosinus meridiei DSM 13257]
gi|402251946|gb|AFQ42221.1| MutS2 family protein [Desulfosporosinus meridiei DSM 13257]
Length = 787
Score = 294 bits (752), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 239/830 (28%), Positives = 393/830 (47%), Gaps = 95/830 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE + L QT +++ PL + ++I + + G ++ E+ +R TLRA
Sbjct: 42 LESVRLALQQTEEGKNLLRGNPLFSVRGAKEIRPYIERCLRGGVIHGEELLEIRDTLRAG 101
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASE 133
+ + L D +++ L ++ LE++I CI D K + D A+
Sbjct: 102 RKIKQLLQ-------DLREQFPGLWDITLPIEPQKPLEDEITRCISEDGK---VADNATP 151
Query: 134 DLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
+L R + R E+L++ L+ + Q + P+IT+R R + +K ++
Sbjct: 152 ELADFRRAINRLQNRIRESLEATLRNPSYQKI----LQDPIITQRSDRYVIPVKQEYRAS 207
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
P GI + S+SGAT F+EP V N + E E IL +L+A+I EI
Sbjct: 208 FP-GIVHDQSASGATLFIEPMPVVHLGNELREVILKEQREVQRILQMLSAQIEGRGDEIA 266
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
L + + ++DL A+A + M+ P L + + + +HPL
Sbjct: 267 DLHEALAQLDLVIAKAHLSVSMNAGAPELVAGQQIKLVQA------RHPL---------- 310
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
IS VP+ +++ E +VITGPNTGGKT ++K
Sbjct: 311 --------------------------ISGRVVPLSLELGIEFDTLVITGPNTGGKTVALK 344
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
+GL + M+++GL +PA++ R+ F I ADIGD QS+EQ+LSTFSGH+ IV+I++
Sbjct: 345 VVGLMAAMNQSGLQIPAESDSRMGVFTQIFADIGDEQSVEQSLSTFSGHMKNIVEIIDRS 404
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL+DE+G+GTDP+EG ALA IL L +R V TTHY L + R +NA
Sbjct: 405 DGRSLVLLDEVGAGTDPTEGAALAMGILAELHERGCRTVSTTHYGALKTFAYETPRVKNA 464
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF ETLRPTYR+L G G SNA IA +G +++++A V ER+ ++
Sbjct: 465 SVEFDTETLRPTYRLLIGIPGKSNAFTIAGRLGLSEEVLEKANTFV----TEREMQ-VAD 519
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
L ++L E R++E + + A + + + +E+++ LD L A + + +
Sbjct: 520 LIENLGETHREIEIEKQKAETGRQAVEKQTKALEEKSIRLDEELEILVALAKDEASEIIR 579
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
AK + + ++ + + LR + + + I+++ I S + S+
Sbjct: 580 EAKREAEAIIDELKAALRKENKQQQD--IEKARQGFRKISAKLDQGRQVKRSGSELSADQ 637
Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 729
G+ V++ L K V+++P +D VL+Q G M+V V + ++ K+
Sbjct: 638 IMLGQTVYMTKLRQK-GQVIKLPNSNDEVLIQAGIMKVMVPLSELKLAQEEKK-----AM 691
Query: 730 PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWES 787
PR RQ G EE ++ +DLRGM VEE LD + A
Sbjct: 692 PRY-----SRQMGIGVRKAEEI---------RSEIDLRGMLVEEGREALDKYMDDAVLGG 737
Query: 788 RSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+++VIHG GTG ++ + E L+ HP V + + + G TV +K
Sbjct: 738 IGLIYVIHGKGTGAMRTGIQEFLKGHPHVRSFRLGEYGEGDSGVTVVELK 787
>gi|226311231|ref|YP_002771125.1| DNA mismatch repair protein [Brevibacillus brevis NBRC 100599]
gi|254766594|sp|C0Z9F1.1|MUTS2_BREBN RecName: Full=MutS2 protein
gi|226094179|dbj|BAH42621.1| DNA mismatch repair protein [Brevibacillus brevis NBRC 100599]
Length = 785
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 247/823 (30%), Positives = 400/823 (48%), Gaps = 104/823 (12%)
Query: 11 IPFGKSLEE---SQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
IPF + L+E +Q+ Q + L + S PL I DI G + A +L+P E+
Sbjct: 35 IPFLR-LDEVINAQQGTEQAATVLRLKGSVPL--GGIRDIRGPVQRARLNAMLAPMELLD 91
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLI 126
+ T+ A + L + D L PLL+ + L ELE +I C+D
Sbjct: 92 IASTVMAGRRLKTFLLDMC--DDHEL----PLLQQQAERIEGLRELETEIRRCVDENG-D 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
ILD AS +L +R E + L+S +++ Q+ ++ K L +T R R + +
Sbjct: 145 ILDSASLELRQVRQE----IRQLESRIREKLDQMTRSSTYQKMLMENIVTIRGDRFVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ + GI + S+SGAT F+EP+ VE NN L E E IL +LT +++
Sbjct: 201 KQEYRSVF-GGIVHDQSASGATLFIEPEVIVEMNNKLRELRLREEREVERILYVLTEQVS 259
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ + + + E+D FA+A A M +CP ++ + +V N+ +HPL+
Sbjct: 260 FAVEALVENTEALTELDFMFAKAQLAWSMKAICPRINDRGYV------NMRKARHPLI-- 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
P + VP+D+++ E + +V+TGPNTG
Sbjct: 312 --------------P-------------------REVVVPVDVELGGEYQAIVVTGPNTG 338
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT S+KT+GL SLM+ AGL++PA+ + F I ADIGD QS+EQ+LSTFS H++ I
Sbjct: 339 GKTVSLKTIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGDEQSIEQSLSTFSSHMTNI 398
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
+ IL + +SLVL DE+G+GTDP+EG ALA SI+ ++ D V TTHY++L
Sbjct: 399 IQILAKMDDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGARLVATTHYSELKAYAYD 458
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
NA+ EF ++TLRPTYR+L G G SNA IA+ +G II V R
Sbjct: 459 RPEVINASVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLPEHIID-----VARGSISE 513
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ ++ + SL R+ E+ A + E +L ++E+E A K K +
Sbjct: 514 EDNQVESMIASLERNRKSAEADRLAAKAARQEAEELRTQLEEERAQF----AEEKNKRME 569
Query: 603 QVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
+ + E + AK + +T++++ + + + + LI + A++E +
Sbjct: 570 RAEDEARIAVQLAKEEAETIIRELREMMAEGMEIKEHRLIDAKKRLGNAVLELEKEKVKK 629
Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
+ + G++V V S G K TV+E +++ LVQ G M+++VK++++
Sbjct: 630 PAKAVRATQI--KVGDEVMVTSFGQK-GTVLEKVNNEE-FLVQIGIMKMKVKRDDMHVQN 685
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
+ ++K A P +++ R K LDLRG VE++ ++
Sbjct: 686 SIQQKPQAAPYTSVKR---------------------RSDNIKMDLDLRGYNVEDSIREI 724
Query: 779 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
D L A + +IHG GTGV+++ V E LR+H V +
Sbjct: 725 DQFLDDALLAGLHSVSIIHGHGTGVLRKGVHEYLRSHRNVKSF 767
>gi|320529025|ref|ZP_08030117.1| putative recombination and DNA strand exchange inhibitor protein
[Selenomonas artemidis F0399]
gi|320138655|gb|EFW30545.1| putative recombination and DNA strand exchange inhibitor protein
[Selenomonas artemidis F0399]
Length = 785
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 249/829 (30%), Positives = 394/829 (47%), Gaps = 103/829 (12%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ A++++Q Q I D+ L A G +L E+ + T++ + NV K
Sbjct: 45 RLHAETAEAVSVLQMQSPPFGGIYDLRRTLQKATLGSILEVEELREIMSTMQGMRNV-KY 103
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
AEL L+ S +E+L LE+ + ID + D AS +L + E
Sbjct: 104 FFRDAELSLPLLKEKSVRIEILGM------LEKHLQNTID-EHGNFRDDASPELRRVTRE 156
Query: 142 ----RKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ R E L ++L A Q FQ + ++T R R + +K ++ P G+
Sbjct: 157 MLSAQNRVKERLSAILHDAAYQKCFQ-----EAIVTVRAERYVIPVKQEYRAQFP-GVIH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NN ++ + E IL L+ EIA++ + +
Sbjct: 211 DRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIARAADILSENCTILA 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+IDL FARAG ++ M+ P + +V + +HPLL
Sbjct: 271 DIDLIFARAGLSRDMEAYAPTFNRAGYVRLQRA------RHPLL---------------- 308
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P D VPIDI++ + V++ITGPNTGGKT SMKTLG+ +L
Sbjct: 309 P-------------------KDHVVPIDIELGRDFSVLLITGPNTGGKTVSMKTLGILAL 349
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++G +LP + LP + I ADIGD QS+EQ+LSTFS H IV IL+ + LVL
Sbjct: 350 MAQSGCFLPTASGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAKSDDLVL 409
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP EG ALA SI+++L R + TTHYA L NA+ EF
Sbjct: 410 LDEVGAGTDPGEGAALARSIIEHLLQRRISVIATTHYAALKTYAYGRQGVMNASVEFDTG 469
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTYR+L G+ G SNA +I++ +G I+ RAQ+ ++ + H + E + +E
Sbjct: 470 TLRPTYRLLIGTPGASNAFSISRRLGLADAIVARAQRYID------EDHVRFETVVNELE 523
Query: 557 ERRKL----ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
+ +++ +++ RT A + + + R D+ R H +E + +E A+
Sbjct: 524 QEKRVYETRQTELRTRAQKISAMEEQLRTERDKFIRAHRELLHKAREEANGIVRE---AR 580
Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
+ ++ + Q D E I+E+ + EA+ P S ++ +
Sbjct: 581 RSAEETIKKLKQQFDDHGVKERRKAIQEARE---RLTEAYMPQRHPSAAKVGQKIHAGEI 637
Query: 673 --GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
G+ VH+ L + TV + G + T VQ G +R VK + + K+K+
Sbjct: 638 EPGDIVHITRLAQE-GTVFAIQGKELT--VQIGALRTVVKTDECTFVSRKKKKHRTE--- 691
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESR 788
+ G G +++A+ RV T +D+RGM V EA L I A +
Sbjct: 692 ---------KVGFTGGISQKAA---RVHT---QIDVRGMTVSEAELTLGKFIDDAVFAGL 736
Query: 789 SVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
S + +IHG GTG ++ + + L+ HP V + S G +VA +K
Sbjct: 737 SKILIIHGKGTGALRLGIQDYLKRHPSVLSVAFADISEGGSGASVAELK 785
>gi|308068160|ref|YP_003869765.1| MutS2 protein [Paenibacillus polymyxa E681]
gi|305857439|gb|ADM69227.1| MutS2 protein [Paenibacillus polymyxa E681]
Length = 789
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 251/817 (30%), Positives = 394/817 (48%), Gaps = 99/817 (12%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE +K+L T A A ++ P + + DI + A G LSP E+ +R T++A
Sbjct: 40 LEHIKKMLKGTDEAYAADRLKGVP-SFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ +T SL +P+ LL L+E LE I CID + LD A
Sbjct: 99 ARRIQVYVT--------SLHEENPVETLLYWSEQLSEQRGLENSIKGCIDENAEV-LDSA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
S +L IR E + R E LDS+++ +++ Q LIT R R + +KA +
Sbjct: 150 STELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + S SGAT F+EP+ V NN E E IL LTA +A+
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQAD 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ Y +D + +D FA+A A+ M P+++ + ++ +HPL+
Sbjct: 264 MLLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
PL+ VPID+++ +++TGPNTGGKT
Sbjct: 312 ----------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL SLM+ +GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ ++ +SLVL+DE+G+GTDP+EG ALA SIL+++ V TTHY++L +
Sbjct: 403 KNMTPKSLVLLDEVGAGTDPAEGSALAVSILEHIHAMGCRMVATTHYSELKAYAYERKGI 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NA+ EF + TL PTYR+L G G SNA IA+ +G +I+ A+ V + R
Sbjct: 463 INASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEV-----TEEDQR 517
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ SL + R E + A L E+ L + E L+ + + K + +
Sbjct: 518 VEHMIASLEQNRLTAEQEREKAEQLRKEMEALRSRHQTELDKLESQRDRMLEKAEDEARV 577
Query: 607 ELNFAKVQIDTVVQDFEN--QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
++ A+ + + ++ D Q AS E + LI + A + + + T
Sbjct: 578 LVDKARSEAEKIITDLRKLAQEEGASVKE-HKLIAARKELDEAEPKQRKKSTVKRPAATR 636
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
T S G++V V SL K VVE+ G + V VQ G M+++V +++ + +
Sbjct: 637 TRSIMA--GDEVSVHSLNKK-GHVVELSGTKEAV-VQLGIMKMKVSLDDLELL-----QP 687
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
A PR++K +G + ++ ++ LDLRG VEEA ++D +
Sbjct: 688 AQTTTPRVQKP----VTGVKRTRDDNV---------RSELDLRGANVEEALMEVDRFMDE 734
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + + +IHG GTGV++ + E LR H V Y
Sbjct: 735 AFLANLGQVHIIHGKGTGVLRTGIQEYLRKHKHVKSY 771
>gi|323490483|ref|ZP_08095690.1| MutS2 protein [Planococcus donghaensis MPA1U2]
gi|323395887|gb|EGA88726.1| MutS2 protein [Planococcus donghaensis MPA1U2]
Length = 786
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 250/831 (30%), Positives = 403/831 (48%), Gaps = 97/831 (11%)
Query: 17 LEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+ E +LL Q +++ + + I DI A G LSP E+ V T+RA
Sbjct: 41 INEVNRLLEQMDEGAQVLRVKNNVPMGGIFDIRLQARRAQIGGSLSPMELMEVSSTVRA- 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ + ++ E + +G + + LE ++ LT LE I CID + LD AS +L
Sbjct: 100 SRILRQFFETIQEEG--VVQIPHFLEKKESMPILTALEHAINVCIDDNGGV-LDSASTEL 156
Query: 136 ELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
IR + R E L+SL++ K A+++ + ++T R R + +K ++
Sbjct: 157 RSIRQQLRTQESRVRERLESLVRGKNASKM-----LSDSIVTIRNDRFVIPVKQEYRSHY 211
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSG T F+EP V+ NN RL E E IL +L+A++ + E+
Sbjct: 212 -GGIVHDQSSSGQTLFIEPDSVVQANNEVRRLKMKEKEEIDRILMMLSAQVQEVAHELFV 270
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L+D + EIDL A+A + G P ++++ + IN++ +HP++
Sbjct: 271 LVDVLGEIDLILAKAKYGSAHKGTKPTMNTEGY------INLKKARHPMI---------- 314
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P K +V VP DI+ + +VITGPNTGGKT ++KT
Sbjct: 315 ------P-KEEV------------------VPNDIEFGRDITAIVITGPNTGGKTVTLKT 349
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GLA+LM+++GL +PA + L FD I ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 350 VGLATLMAQSGLPVPALDGSELAVFDQIFADIGDEQSIEQSLSTFSSHMVNIVDILTKFD 409
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLV+ DE+G+GTDP EG ALA S+L + R + TTHY +L NA+
Sbjct: 410 ENSLVIFDELGAGTDPQEGAALAISLLDEVHGRGARVIATTHYPELKAYGFNRPGVANAS 469
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTYR+L G G SNA I+K +G II A+ +
Sbjct: 470 VEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLPEHIISHAKSFT-----GTDSKAVDSM 524
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
SL + RR+ E A + +E L +E+ + ++ +++ + K ++ ++ ++
Sbjct: 525 IASLEKSRREAEQDAERTQEVLSESEQLKKELAQQLEEYEQKKEQREEKAKEKARKIVDE 584
Query: 611 AKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
A+ + ++V+ + QL S+ + + LI + A+ P++ +
Sbjct: 585 ARAEAESVISELRKMQLNQGSSVKEHELINAKKRLDEAM-----PENRILKKAAKANEAK 639
Query: 670 P-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
P Q ++V V S G K T+VE ++ + VQ G +++++ ++++ + P
Sbjct: 640 PLQPNDEVKVISFGQK-GTLVEKVSKNEWI-VQIGILKMKLPESDL---------SFTKP 688
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
KQ+E R A+ R K LDLRG R E+A +++ L A
Sbjct: 689 ----EKQKETRTM---------ATLKDRDSHVKMELDLRGERYEDALARVEKYLDDALLS 735
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+ + +IHG GTG +++ V + L+ HPRV Y + G TVA +K
Sbjct: 736 NYHQVSIIHGKGTGALRQGVQQYLKKHPRVKSYRFGEAGEGGSGVTVAELK 786
>gi|418637528|ref|ZP_13199847.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus lugdunensis VCU139]
gi|374838774|gb|EHS02309.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus lugdunensis VCU139]
Length = 783
Score = 293 bits (750), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 238/811 (29%), Positives = 387/811 (47%), Gaps = 108/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +L+ A G +L+ +E+ ++R ++ V N +K L+ D Q Y PLL
Sbjct: 65 LSGLSKVSPLLHRAKIGSVLNVTELNQLKRLIQ-VQNQFKTFYNQL-LEDDEQQVYYPLL 122
Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
+ + LT+L ++I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 HDNMMRLPVLTDLFQEINDKCDTHDL--YDHASYELQGIRSKISSTTQRIRQNLDRIVKN 180
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
+ Q + ++T R R + +KA ++ GI + S+SG T ++EP VE
Sbjct: 181 QSNQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEM 235
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN RL N E E IL++LT +A+ + + + +D A+A +A + G
Sbjct: 236 NNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKARYASAIKGTK 295
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + ++ HPLL +N+ DVE
Sbjct: 296 PTFYEARTIYLPNAF------HPLL------DKETVVANTIEFADDVE------------ 331
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 332 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 374
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H+ IV IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 375 HDVFCDIGDEQSIEQSLSTFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGAALAMS 434
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 435 ILDYTRALGALVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
+I+K +G + II +A+ ++ E +LM E LE A+ + E+
Sbjct: 495 DISKKLGLNLSIINKAKTMIGTDEQEI----------NLMIE--SLEKNAKRVDTQRIEL 542
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DE 633
L +E + DL+++ +A E Q ++ + A ++ ++ + L++ D+
Sbjct: 543 DHLLKEAQQTHDDLEKQYNQFQAYEKQLIEDAKDKANQRVKAATKEADEILKELRTLRDQ 602
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+ +KE E I + + D+ + ++ G++V V S G K V
Sbjct: 603 KGADVKEHE----LIDKKKQLDNQYEAKSIKQQVQKQKYDKIVAGDEVKVLSYGQK-GEV 657
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ G+D+ V VQ G +++++ ++ I +K P +++Q
Sbjct: 658 LELVGNDEAV-VQMGIIKMKLPIEDLEKI----KKKQEKPTKMIKRQHR----------- 701
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R EEA +LD L A + +++IHG GTG +++ V
Sbjct: 702 ---------QTIKTELDLRGYRYEEALIELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 752
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V + P +G TVA +K
Sbjct: 753 QQHLKRHKSVKSFRGGMPSEGGFGVTVAELK 783
>gi|56964440|ref|YP_176171.1| recombination and DNA strand exchange inhibitor protein [Bacillus
clausii KSM-K16]
gi|81678829|sp|Q5WEK0.1|MUTS2_BACSK RecName: Full=MutS2 protein
gi|56910683|dbj|BAD65210.1| MutS family DNA mismatch repair protein [Bacillus clausii KSM-K16]
Length = 787
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 247/825 (29%), Positives = 402/825 (48%), Gaps = 97/825 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SLEE + L ++T+ A +++ + + L I D+ + A G +LS +E+ + TL
Sbjct: 38 SLEEVRHLQDETAEAANVLRLKGHVPLGGISDVRPHIKRAAIGGVLSATELIEIASTLYG 97
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V K+ E DG P+L ++ L+ +E+ I CID + LD AS
Sbjct: 98 GKRV-KQFIETIIEDG---HIEVPILAGHVEQIEPLSPIEKAIKQCIDDNGYV-LDSAST 152
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
L +R + + + S L ++ + ++T R R + +K ++ G
Sbjct: 153 SLRTVRHQIRSYESGIKSKLDQLTRSSNTRKMLSDAIVTIRSDRYVLPVKQEYRGTF-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + SSSGAT F+EP V NN E E IL L+A++A+ ++ +D
Sbjct: 212 IVHDQSSSGATLFIEPAAIVTLNNQLTEAKAKEKREIERILRELSAKVAEESEQLLLNVD 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
++ ++D A+A +A+ + V P L+ + ++ + +HPLL
Sbjct: 272 KLAQLDFICAKAYYAKAVKAVKPTLNDRGYLDLRQA------RHPLL------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
P D VP D+ + + R +VITGPNTGGKT ++KT+GL
Sbjct: 313 ---P-------------------PDKVVPSDMAIGDQVRSLVITGPNTGGKTVTLKTIGL 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
+LM+++GL++PA L F+ I ADIGD QS+EQ+LSTFS H+ IV IL ++ S
Sbjct: 351 LTLMAQSGLFVPAAEETELAVFEHIFADIGDEQSIEQSLSTFSSHMKNIVSILNEMNENS 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
L+L DE+G+GTDP+EG ALA SIL ++ R LAV TTHY++L NA+ EF
Sbjct: 411 LILFDELGAGTDPTEGAALAISILDHVYKRGALAVATTHYSELKGYAYNREGALNASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ETLRPTYR+L G G SNA I++ +G D +II +A +L+ + + ++ S
Sbjct: 471 DVETLRPTYRLLVGVPGRSNAFAISRRLGLDERIIDQA-----KLQIDSDASQVEKMIAS 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L + ++ +S+ A ++ E L R++E + K Q+ ++ + A+
Sbjct: 526 LEDSQKSAQSEWSRAEAVRREAEALKRDLEKRMASFEEMKEAALQKAEQKAEKVVAAAQE 585
Query: 614 QIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
+ ++ + + + A + + LI K+ E A +V R + + P
Sbjct: 586 NAELIISELRDLQKQGVAVKEHQLIEARKQLEEAAPKLVSKKRKQVK---KQAEKAKRLP 642
Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
+ G++V V S K TVV+ GD++ VQ G M++ V ++I+ +
Sbjct: 643 EPGDEVKVLSFNQK-GTVVKKIGDNE-YQVQLGIMKMAVPIDDIQLL------------- 687
Query: 731 RLRKQQEDRQSGSAGSS--NEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALA 783
+QE RQ A ++ +A K LDLRG R E+A ++ D LA
Sbjct: 688 ----EQERRQPEKAITTIRGNDAHV-------KAELDLRGERYEDAMRRVEKYIDDALLA 736
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+ S+ IHG GTG +++ V + + NHPRV K ++ MN G
Sbjct: 737 GYHQVSI---IHGKGTGALRKGVKQFVANHPRV-KSARDGGMNEG 777
>gi|350269070|ref|YP_004880378.1| MutS2 protein [Oscillibacter valericigenes Sjm18-20]
gi|348593912|dbj|BAK97872.1| MutS2 protein [Oscillibacter valericigenes Sjm18-20]
Length = 795
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 251/821 (30%), Positives = 403/821 (49%), Gaps = 106/821 (12%)
Query: 18 EESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EE +LL+QT AA M ++ P S ++ + L+ A G L+ E+ + L A
Sbjct: 44 EEVLRLLDQTDAAREMIGLRGSP-SFSGLKPVREALDRADRGGGLNTRELLTIAGLLTAA 102
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
++ E D L L FL E++I I I D AS +L
Sbjct: 103 ----RRTREYFNADTGEKSAIDHLFLSLHGNRFL---EDRIKSVI-LDEDTISDNASPEL 154
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +L+++ + + + + LIT+R R V +KA K LP G+
Sbjct: 155 NDIRRKMRAAQAKSRQVLQRIISSPSYSKVLQESLITQRDGRFVVPVKAEQKAALP-GLV 213
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+VSS+GAT F+EP G V+ NN + L E E IL+ L+A+ A +I++ D +
Sbjct: 214 HDVSSTGATLFVEPMGVVQANNEYIELEAREKKEIERILAELSADAANHREDIQWDYDAL 273
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ +DL FAR + +DGV P + D +I + +HPLL +
Sbjct: 274 VHLDLIFARGQLSYKLDGVRP------EIRRDGAIVLRKARHPLLDRAK----------- 316
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VPIDI++ +VITGPNTGGKT S+KTLGL +
Sbjct: 317 ------------------------AVPIDIELGDSFDTLVITGPNTGGKTVSLKTLGLLT 352
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM++ GL++PA + ++ ++ +LAD+GD QS+EQ+LSTFS H++ IV IL+ + +LV
Sbjct: 353 LMAQCGLHIPAASGSQISVYERVLADVGDEQSIEQSLSTFSAHMTSIVRILQETDQRTLV 412
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+G+GTDP EG ALA +I+Q +R TTHYA+L ENA+ EF +
Sbjct: 413 LFDELGAGTDPVEGAALAIAIIQQVRRFGAKLAATTHYAELKTFAMTTAGVENASCEFDV 472
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ--RAQKLVERLRPERQQHRKSELYQS 553
E+L+PTYR+L G G SNA I++ +G +++ +AQ + +R E ++
Sbjct: 473 ESLQPTYRLLIGIPGKSNAFAISRRLGLPDDVVEDAKAQMAGDSVRFE-------DVLTQ 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAK-------DLDRRAAHLKAKETQQVQQ 606
L ++R+ LE + E+ LY++ E++A+ ++R + +++ ++
Sbjct: 526 LEQKRQALEKK-------QVEVDRLYQQREEDARKGREFRTQMERARDNARSRGEADARR 578
Query: 607 ELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAI-AAIVEAHRP--DDDFSVSE 662
L AK D + + E + + A AD +L E+++AI + EA +F+
Sbjct: 579 ILRDAKAAADQTMNELAELRRQQAKADAAQNL-NEAQAAIRRGLNEAEEKLRSREFAPEP 637
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI--PNS 720
S Q G+QV + + LA VV V G D + +Q G+M++ VK N +R + P
Sbjct: 638 IPRPSRPIQKGDQVEIPGV-KTLAEVVSV-GKDGVLQLQAGRMKMTVKANEVRLVEEPAG 695
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD- 779
++K PA +R + +A SS LD+RGM EA ++
Sbjct: 696 RKK----PAVSIRPHAAQQLLRTAASSE---------------LDIRGMESIEAESVVEN 736
Query: 780 -IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
++ A + +IHG GTGV+++ V +ILR + V +
Sbjct: 737 FLSAAVMGRLETVTIIHGKGTGVLRKTVHDILRRNKAVKSF 777
>gi|452995728|emb|CCQ92597.1| MutS2 protein [Clostridium ultunense Esp]
Length = 792
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 251/810 (30%), Positives = 394/810 (48%), Gaps = 80/810 (9%)
Query: 16 SLEESQKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SLEE + L +T AL + M++ L I DI+ L A G L+P+ + V +LR
Sbjct: 39 SLEEVEYLQRETKEALELIMKNGNPPLFGIFDISHELKMAEIGGTLNPNNLLKVSDSLRV 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
++ K + E E + ++ L L+ + L +E++I I I D AS
Sbjct: 99 SRSLKKYMKELKE---EETIKFPILQGLISSLRALKFIEDEINNAI-INENEISDNASPT 154
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR + E++ + L + + + ++T R R V IK +K P G+
Sbjct: 155 LRNIRRQIINKNESIRNRLNSIISSPKYKKFLQDSIVTMREGRYVVPIKQENKAYFP-GL 213
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SSSGAT F+EP VE NN L E E IL L+A +A+ + I+ +
Sbjct: 214 VHDQSSSGATLFVEPMAVVELNNELRELEIKEREEIERILKELSALVAEEAKNIRNNQNI 273
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D FA+ A MDG P+L+ + I+I+ +HPLL
Sbjct: 274 LQRLDFIFAKGKLALEMDGTKPLLNKSGY------IDIKQARHPLL-------------- 313
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
E E+ VPIDI + +VITGPNTGGKT ++KT+GL
Sbjct: 314 --------EPKEV-------------VPIDIYLGKGFNTLVITGPNTGGKTVTLKTVGLL 352
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM+++G+++PA + ++ FD I ADIGD QS+EQ+LSTFS H++ IVDIL+ V + SL
Sbjct: 353 TLMAQSGIHIPADFNSQIGVFDQIFADIGDEQSIEQSLSTFSSHMTNIVDILDKVEQNSL 412
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L DE+G+GTDP+EG ALA SIL +L + TTHY+ L R NA+ EF
Sbjct: 413 ILFDELGAGTDPTEGAALAMSILDHLLKLNIRTIATTHYSQLKIYALTTDRVRNASVEFD 472
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
+ETL PTYR+L G G SNA I+K +G II A+ LV + E + ++ Q++
Sbjct: 473 VETLSPTYRLLIGVPGKSNAFEISKRLGLQGYIIDYAKTLVSKENVEFE-----DVLQAI 527
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
++R+ +E A L +++ L E+ E + + + ++ + L AK +
Sbjct: 528 DKDRKIIEENRFEAERLKSDVEKLKEELTKEKEKTKAEREKIITRAKEEARSILRAAKEE 587
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAI---VEAHRPDDDFSVSETNTSSFTPQ 671
D +V + + + D N I+E++ + + VE+ D +V +
Sbjct: 588 SDHIVTELRHISTEIEKDR-NKKIQEAQEKLKSSLDQVESSLSKDVLNVKSKKIPK-NLK 645
Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
GE V V SL +++ V+E+P ++ V VQ G M+V V + +R + + +
Sbjct: 646 IGEMVEVLSL-NQIGNVLELPDENGNVQVQVGIMKVNVHISTLRRAEEVESEKTYTSTKK 704
Query: 732 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRS 789
+ K + SSN KN +DLRG ++EA LD I A
Sbjct: 705 IIKSK---------SSN-----------IKNEIDLRGSTLDEALLDLDKYIDDAYIAGLK 744
Query: 790 VLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
++IHG GTGV++E + ++ H V +
Sbjct: 745 EAYIIHGKGTGVLREGIKSYVKGHKNVKSF 774
>gi|254526388|ref|ZP_05138440.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9202]
gi|221537812|gb|EEE40265.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9202]
Length = 803
Score = 293 bits (749), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 257/855 (30%), Positives = 412/855 (48%), Gaps = 112/855 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
MG + IP E S++LLN+T L + + S + DI+ + G
Sbjct: 41 MGKRAILSFGIP--SEYELSKRLLNETVEINELENNLDKSISFSNVFDISRNIEICSKGG 98
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
++S +E+ + +T+ A N+ K L LD + S + L+ + N T K G
Sbjct: 99 VISSTELLEIAKTIAAARNLKKIL-----LDFEQRPYISSFTKNLIDHQNVETIF--KKG 151
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
+ K I D AS +L ++R E L KK+ +I I K L
Sbjct: 152 IESNGK---ISDNASNELSILRKEL---------LSKKLERKILVEKFIQKNLAYLQDTT 199
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
I R R + +K ++ + GI + SSSG T + EP+ V N L IAEE
Sbjct: 200 IGDRNGRPVLAVKVNY-VIKFKGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARIIAEE 258
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 290
+L + ++ + + + +L ++ A R+ +++W+ G P +S
Sbjct: 259 FKLLKKWSQIVSDNSENLIEMSSILLRLENALTRSRYSKWIGGKTPTFEKNPIIS----- 313
Query: 291 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 350
+ G HPLL+ + + PV +D +
Sbjct: 314 -LVGFSHPLLIWEHKKKGAPP----------------------------PVAVDFHINRN 344
Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
+VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSLE+
Sbjct: 345 IKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEE 404
Query: 411 NLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
NLSTFSGHISRI +IL+ ++ + S+VL+DEIGSGTDP EG ALA ++L+ ++ +
Sbjct: 405 NLSTFSGHISRIKEILDSLNNKKGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSDIT 464
Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
+ TTHY D+ LK D+RFEN + F ++L+P Y + WG G SNAL+I+K IG D I
Sbjct: 465 LATTHYGDIKALKYTDSRFENVSVVFDEDSLKPKYILNWGIPGRSNALSISKRIGLDENI 524
Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
+ A LRP ++ +++ + L EER K ++ A AA L A L+ E++ +
Sbjct: 525 LNEA---ANYLRP-KEVDNINDIIKGLEEERIKQQNSAEAAAELIARTEILHDELKRNYE 580
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKESE 642
A ++ E ++ + + AK + V D +LRD + D I +KE E
Sbjct: 581 YQKINAEKIQEIERSKLSKHIVSAKKE----VIDLIKKLRDKNVDGEDTRIIGKRLKEIE 636
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
+ H F S S+ PQ G+ V +KSL + +V++ V+
Sbjct: 637 T-------EHLTQKKFKKS----ISWDPQVGDFVKIKSL-NSTGQIVDLDKKGGFYEVKC 684
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G R + N+ I N P ++ K + S+ E+ S+ +++TSKN
Sbjct: 685 GSFRSTLSINDFEGI------NGEKPNFKMSKIE-------IKSTREDFSFS-KIRTSKN 730
Query: 763 SLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ- 821
++D+RG+RV EA ++ + + L+++HG+GTG +K+ + L V K E
Sbjct: 731 TIDVRGLRVHEAEIIIEEKIRKF--HGPLWIVHGIGTGKLKKGLRNWLSGLNYVDKIEDA 788
Query: 822 -ESPMNYGCTVAYIK 835
+ GC++A+IK
Sbjct: 789 ANNEGGPGCSIAWIK 803
>gi|49483307|ref|YP_040531.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus MRSA252]
gi|282903692|ref|ZP_06311580.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C160]
gi|282905461|ref|ZP_06313316.1| MutS2 protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908435|ref|ZP_06316266.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|283957887|ref|ZP_06375338.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295427631|ref|ZP_06820263.1| MutS2 protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297591415|ref|ZP_06950053.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MN8]
gi|415684425|ref|ZP_11449554.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS00]
gi|418566423|ref|ZP_13130804.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21264]
gi|418581975|ref|ZP_13146053.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1605]
gi|418595208|ref|ZP_13158829.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21342]
gi|418602382|ref|ZP_13165788.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21345]
gi|418897682|ref|ZP_13451752.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900552|ref|ZP_13454609.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1214]
gi|418908854|ref|ZP_13462859.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG149]
gi|418916937|ref|ZP_13470896.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1267]
gi|418922724|ref|ZP_13476641.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1233]
gi|418982055|ref|ZP_13529763.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1242]
gi|418985723|ref|ZP_13533409.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1500]
gi|56749238|sp|Q6GHU1.1|MUTS2_STAAR RecName: Full=MutS2 protein
gi|49241436|emb|CAG40120.1| MutS family DNA mismatch repair protein [Staphylococcus aureus
subsp. aureus MRSA252]
gi|282328100|gb|EFB58382.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282330753|gb|EFB60267.1| MutS2 protein [Staphylococcus aureus subsp. aureus Btn1260]
gi|282595310|gb|EFC00274.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus C160]
gi|283790036|gb|EFC28853.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus A017934/97]
gi|295127989|gb|EFG57623.1| MutS2 protein [Staphylococcus aureus subsp. aureus EMRSA16]
gi|297576301|gb|EFH95017.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus MN8]
gi|315193814|gb|EFU24209.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus CGS00]
gi|371970636|gb|EHO88053.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21264]
gi|374396082|gb|EHQ67333.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21345]
gi|374402075|gb|EHQ73118.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21342]
gi|377703020|gb|EHT27336.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1214]
gi|377704336|gb|EHT28645.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1242]
gi|377705541|gb|EHT29845.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1500]
gi|377710385|gb|EHT34623.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1605]
gi|377736047|gb|EHT60077.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1233]
gi|377750111|gb|EHT74049.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1267]
gi|377754850|gb|EHT78756.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG149]
gi|377760717|gb|EHT84593.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIGC341D]
Length = 782
Score = 292 bits (748), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 403/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A ++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARCSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|374604257|ref|ZP_09677223.1| MutS2 family protein [Paenibacillus dendritiformis C454]
gi|374390142|gb|EHQ61498.1| MutS2 family protein [Paenibacillus dendritiformis C454]
Length = 785
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 259/823 (31%), Positives = 414/823 (50%), Gaps = 130/823 (15%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L+ ++DI G L A +LS +E+ + L A + + E + PLL
Sbjct: 65 LAGVKDIRGALKRARIQAMLSSTELWDISALLFAARRTKRHIAAVHE------EEAIPLL 118
Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
+ L + + +LEE I CID + I LD+AS +L IR E + R E L+++++
Sbjct: 119 QDLAETISDQKQLEEDIRQCIDEQGEI-LDQASFELAAIRRELRIGETRIREKLEAMIRS 177
Query: 156 V-AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
AA++ Q + LIT R R + +K ++ GI + S SGAT F+EP+ V
Sbjct: 178 SNAAKMLQ-----EQLITIRNDRYVIPVKQEYRSHY-GGIVHDQSGSGATLFIEPEAIVA 231
Query: 215 FNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWM 271
NN +L +++ EE I LS LT ++ ++Y V +D FA+A A+ M
Sbjct: 232 MNN---KLRETKLREEREIERILSRLTEQVGLLADVLEYDTGAVETLDFMFAKARLAREM 288
Query: 272 DGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGS 331
P ++ + + + +HPL+ P
Sbjct: 289 KASLPRMNDRGFLKLRKA------RHPLI----------------P-------------- 312
Query: 332 LSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPR 391
+D VPID+++ +++TGPNTGGKT ++KT+GL +LM+ +GL++PA++ +
Sbjct: 313 -----ADQVVPIDVELGNSYTSILVTGPNTGGKTVTLKTIGLLNLMAMSGLFIPAEDGSQ 367
Query: 392 LPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVA 451
+ FD I ADIGD QS+EQ+LSTFS H++ I+ ILE ++ +SLVL+DE+G+GTDP+EG A
Sbjct: 368 MCVFDAIYADIGDEQSIEQSLSTFSSHLTNIIRILEQMTPKSLVLLDEVGAGTDPAEGSA 427
Query: 452 LATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
LA +IL+++ R+G +V TTHY++L + NA+ EF ++TLRPTYR+L G G
Sbjct: 428 LAIAILEHIH-RLGCRMVATTHYSELKAYAYERKGVINASMEFDVQTLRPTYRLLVGVPG 486
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
SNA IA+ +G + II A+ V + R + SL + R K E++ TA+
Sbjct: 487 RSNAFAIAERLGLPKPIIDHARGEV-----TEEDMRVETMIASLEDNRLKAEAERETASK 541
Query: 571 LHAEI----MDLYREIEDEAKDLDRRAAHLKAK----------ETQQVQQELNFAKVQID 616
L E+ L RE+E + + ++R +AK E Q++ EL ++
Sbjct: 542 LRMELEAMRQKLSRELEKQEAEREKRQEQAEAKARAIVDKARREAQEIIAELRQLAME-- 599
Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 676
VQ E+ L +A + E+A A + A D V G+ V
Sbjct: 600 -GVQVKEHMLTEARK-------RLDEAAPEAKLAAKPKRDAKPVRRIEA-------GDDV 644
Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 736
V SL K +VVE+ G++ +VQ G M+++V +++ + ++ K+AA P
Sbjct: 645 RVYSLNQK-GSVVELAGEE--AVVQLGIMKMKVPLDDLELLSSA--KSAAKPV------- 692
Query: 737 EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVI 794
QSG +N + + G V ++ LDLRG +EEA ++D L A + +++I
Sbjct: 693 ---QSG----ANVKRTRGESV---RSELDLRGANLEEALMEVDRFLDEALLGNLGQVYII 742
Query: 795 HGMGTGVVKERVLEILRNHPRVAKYEQES--PMNYGCTVAYIK 835
HG GTG+++ + E LR H V + S G TVA +K
Sbjct: 743 HGKGTGILRSGIQEFLRKHKHVKSFRLGSFGEGGTGVTVAELK 785
>gi|418891775|ref|ZP_13445890.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1176]
gi|377731107|gb|EHT55164.1| mutS2 protein [Staphylococcus aureus subsp. aureus CIG1176]
Length = 782
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 238/816 (29%), Positives = 403/816 (49%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A ++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARCSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKNADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ E +E+ +SL +++E+Q + A
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEI-----NEMIESLERNYKRVETQRLELDRLVKEA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y++ ++ K L A ++ Q++ A + D +++D QLR+
Sbjct: 549 EQVHDDLSKQYQQFQNYEKSLIEDAK-------EKANQKIKAATKEADDIIKDLR-QLRE 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + R DD + + ++ G++V V S G
Sbjct: 601 QKGAD----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ + VQ G +++++ PI + ++K P +++R
Sbjct: 653 K-GEVLEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKEKVKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R E+A +LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V+ + P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK 782
>gi|418329211|ref|ZP_12940290.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis 14.1.R1.SE]
gi|418631982|ref|ZP_13194426.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU128]
gi|420192813|ref|ZP_14698670.1| MutS2 family protein [Staphylococcus epidermidis NIHLM023]
gi|365230873|gb|EHM71948.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis 14.1.R1.SE]
gi|374833651|gb|EHR97326.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU128]
gi|394260629|gb|EJE05438.1| MutS2 family protein [Staphylococcus epidermidis NIHLM023]
Length = 782
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 246/816 (30%), Positives = 396/816 (48%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR+E +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINETCDAHDL--FDHASYTLQSIRSEISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ + + + +SL + ++++ Q R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
H + Y++ ++ K L A K K Q+V+ A + D ++++ N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
E +KE E I + + DD + V ++ G++V V S G
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ GD++ V VQ G +++++ PI + ++ P +++R
Sbjct: 653 K-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|389819500|ref|ZP_10209368.1| MutS2 protein [Planococcus antarcticus DSM 14505]
gi|388463298|gb|EIM05662.1| MutS2 protein [Planococcus antarcticus DSM 14505]
Length = 786
Score = 292 bits (747), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 251/834 (30%), Positives = 404/834 (48%), Gaps = 103/834 (12%)
Query: 17 LEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+ E +LL Q +++ + + I DI A G LSP E+ V T+RA
Sbjct: 41 INEVNRLLEQMDEGAQVLRVKNNVPMGGIFDIRLHARRAQIGGSLSPMELMEVSSTIRA- 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ + ++ E + +++ + LE ++ LT LE I CID + LD AS +L
Sbjct: 100 SRILRQFFET--IKEEAVIQIPHFLEKKESMPILTVLEHAINICIDDNGGV-LDSASSEL 156
Query: 136 ELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
IR + R E L+SL++ K A+++ + ++T R R + +K ++
Sbjct: 157 RSIRQQLRTQESRVRERLESLVRGKNASKM-----LSDSIVTIRNDRFVIPVKQEYRNHY 211
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSG T F+EP V+ NN RL E E IL +L+A++ + E+
Sbjct: 212 -GGIVHDQSSSGQTLFIEPDVVVQANNEVRRLKMKEKEEIDRILLMLSAQVQEVAHELFL 270
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L++ + EIDL A+A + G P ++++ + IN++ +HPL+
Sbjct: 271 LVEVLGEIDLILAKAKYGAAHKGTKPTMNTEGY------INLQKARHPLI---------- 314
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P D VP DI+ + +VITGPNTGGKT ++KT
Sbjct: 315 ------P-------------------KDEVVPNDIEFGGDITAIVITGPNTGGKTVTLKT 349
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL++LM+++GL +PA + L FD I ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 350 VGLSTLMAQSGLPVPALDGSELSVFDQIFADIGDEQSIEQSLSTFSSHMVNIVDILTKFD 409
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLV+ DE+G+GTDP EG ALA S+L + R + TTHY +L NA+
Sbjct: 410 ENSLVIFDELGAGTDPQEGAALAISLLDEVHGRGARVIATTHYPELKAYGYNRPGVANAS 469
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTYR+L G G SNA I+K +G II A+ +
Sbjct: 470 VEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLPEHIINHAKSFT-----GTDSKAVDSM 524
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
SL + RR+ E A + +E L +E+ + ++ +++ L+ K ++ ++ +
Sbjct: 525 IASLEKSRREAEQDAEQTKKILSESEQLKKELAKQLEEYEQQKERLEEKAKEKARKIVGQ 584
Query: 611 AKVQIDTVVQDFEN-QLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETNTS 666
A+V+ + V+ D QL +S+ + + LI K E+A+ P + +
Sbjct: 585 ARVEAEAVISDLRKMQLNQSSSVKEHELIDAKKRLENAL--------PQNRILKKAAKDN 636
Query: 667 SFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
+ P + ++V V S G K T+VE ++ + VQ G +++++ ++++ +
Sbjct: 637 AEKPLKANDEVKVISFGQK-GTLVEKVSKNEWI-VQIGILKMKLPESDL---------SY 685
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--A 783
P KQ+E R A+ R K LDLRG R E+A +++ L A
Sbjct: 686 TKP----EKQKETRTM---------ATLKDRDSHVKMELDLRGERYEDALARVEKYLDDA 732
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+ + +IHG GTG +++ V + L+ HPRV Y + G TVA +K
Sbjct: 733 LLSNYHQVSIIHGKGTGALRQGVQQYLKKHPRVKSYRFGEAGEGGSGVTVAELK 786
>gi|289551051|ref|YP_003471955.1| recombination inhibitory protein MutS2 [Staphylococcus lugdunensis
HKU09-01]
gi|385784672|ref|YP_005760845.1| MutS family DNA mismatch repair protein [Staphylococcus lugdunensis
N920143]
gi|418414347|ref|ZP_12987562.1| MutS2 protein [Staphylococcus lugdunensis ACS-027-V-Sch2]
gi|289180583|gb|ADC87828.1| Recombination inhibitory protein MutS2 [Staphylococcus lugdunensis
HKU09-01]
gi|339894928|emb|CCB54231.1| MutS family DNA mismatch repair protein [Staphylococcus lugdunensis
N920143]
gi|410876954|gb|EKS24851.1| MutS2 protein [Staphylococcus lugdunensis ACS-027-V-Sch2]
Length = 783
Score = 292 bits (747), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 239/811 (29%), Positives = 388/811 (47%), Gaps = 108/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +L+ A G +L+ +E+ ++R ++ V N +K L+ D Q Y PLL
Sbjct: 65 LSGLSKVSPLLHRAKIGSVLNVTELNQLKRLIQ-VQNQFKTFYNQL-LEDDEQQVYYPLL 122
Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
+ + LT+L ++I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 HDNMMRLPVLTDLFQEINDKCDTHDL--YDHASYELQGIRSKISSTTQRIRQNLDRIVKN 180
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
+ Q + ++T R R + +KA ++ GI + S+SG T ++EP VE
Sbjct: 181 QSNQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEM 235
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN RL N E E IL++LT +A+ + + + +D A+A +A + G
Sbjct: 236 NNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKARYASAIKGTK 295
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + ++ HPLL +N+ DVE
Sbjct: 296 PTFYEARTIYLPNAF------HPLL------DKETVVANTIEFADDVE------------ 331
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 332 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 374
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H+ IV IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 375 HDVFCDIGDEQSIEQSLSTFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGAALAMS 434
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 435 ILDYTRALGALVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
+I+K +G + II +A+ ++ E +LM E LE A+ + E+
Sbjct: 495 DISKKLGLNLSIINKAKTMIGTDEQEI----------NLMIE--SLEKNAKRVDTQRIEL 542
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DE 633
L +E + DL+++ +A E Q ++ + A ++ ++ + L++ D+
Sbjct: 543 DHLLKEAQQTHDDLEKQYNQFQAYEKQLIEDAKDKANQRVKAATKEADEILKELRTLRDQ 602
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+ +KE E I + + D+ + ++ G++V V S G K V
Sbjct: 603 KGADVKEHE----LIDKKKQLDNQYEAKSIKQQVQKQKYDKIVAGDEVKVLSYGQK-GEV 657
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ G+D+ V VQ G +++++ I + +K+K P +++Q
Sbjct: 658 LELVGNDEAV-VQMGIIKMKLP---IEDLEKTKKKQ-EKPTKMIKRQHR----------- 701
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R EEA +LD L A + +++IHG GTG +++ V
Sbjct: 702 ---------QTIKTELDLRGYRYEEALIELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 752
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V + P +G TVA +K
Sbjct: 753 QQHLKRHKSVKSFRGGMPSEGGFGVTVAELK 783
>gi|430749370|ref|YP_007212278.1| MutS2 family protein [Thermobacillus composti KWC4]
gi|430733335|gb|AGA57280.1| MutS2 family protein [Thermobacillus composti KWC4]
Length = 784
Score = 291 bits (746), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 252/831 (30%), Positives = 406/831 (48%), Gaps = 117/831 (14%)
Query: 25 NQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
++ SAA + + P I D+ L A G L+P+E+ + T R V + + +
Sbjct: 51 DEASAAERLKGAPPF--GGIADVRAALKRAKIGGKLNPAELLEIASTARGGRLVKRHIAQ 108
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELIRAE 141
E PLL L LTE LEE I CID + ++ D+AS +L IR E
Sbjct: 109 IHE------DHPLPLLHGL--AGQLTEHRALEESIARCIDEQAYVV-DQASPELAAIRRE 159
Query: 142 RK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
+ R E L+ L++ + Q + +IT R R + +K ++ GI +
Sbjct: 160 LRGGEARIREKLEQLVRSPSVQKM----LQDAIITIRGDRFVIPVKQEYRGHF-GGIVHD 214
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S SGAT F+EP+ V+ NN L +E E IL LTAE A+ ++ ++ + +
Sbjct: 215 QSGSGATLFIEPESIVQMNNKLRELKMAEEREIERILLRLTAETAEHADDLAANLELLGQ 274
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+D AFA++ A+ M P ++ + + +HPLL S+
Sbjct: 275 LDFAFAKSRLAREMRASLPRMNDRGFLKLKRG------RHPLLPPESV------------ 316
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
VP+D+++ ++ITGPNTGGKT ++KT+GL SLM
Sbjct: 317 -----------------------VPLDVELGNSYTAIIITGPNTGGKTVTLKTIGLLSLM 353
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
+ +GL++PA + +L FD I ADIGD QS+EQNLSTFSGH++ I+ +L ++ +SLVL+
Sbjct: 354 AMSGLFVPADDGSQLCVFDAIYADIGDEQSIEQNLSTFSGHMTNIIRMLREMTPKSLVLL 413
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP+EG ALA +IL+++ R+G +V TTHY++L NA+ EF ++
Sbjct: 414 DELGAGTDPAEGSALAIAILEHIH-RLGCRIVATTHYSELKAYAYNRKGIINASMEFDVQ 472
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TL PTYR+L G G SNA IA+ +G R II+RA+ V R ++ SL E
Sbjct: 473 TLSPTYRLLVGVPGRSNAFAIAERLGLPRSIIERARGEV-----SEDDRRVEDMIASLEE 527
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
+R+ E++ +TA SL AE+ L E + +++ + AK ++ ++ + A+ + +
Sbjct: 528 DRQSAEAERQTAESLRAEMERLKERHAAELRKFEQQRDRMLAKAQEEAREAVAKARREAE 587
Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF--------SVSETNTSSF 668
++ D LR + +E S +KE + ++EA R D+ S
Sbjct: 588 AIIAD----LRRMALEEAAS-VKEHK-----LIEARRRLDEAIPDLTPKPSAQGAARKPV 637
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
+ G++V V SL K V+E + LVQ G ++++V +++ I +
Sbjct: 638 RVEPGDEVTVISLNQK-GVVLET--GETEALVQIGILKMKVALSDLERIKQPPQPKQPQA 694
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
A L++ + D + LDLRG +E+A ++D L A
Sbjct: 695 AASLKRTKGD---------------------LRMELDLRGSTLEDAILEVDRFLDEAYLA 733
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQES--PMNYGCTVAYIK 835
+ + +IHG GTGV++ + + LR H V + + G TVA +K
Sbjct: 734 NLGQVTIIHGKGTGVLRSGIRDFLRRHRLVKSFRDGAYGEGGNGVTVAELK 784
>gi|291542202|emb|CBL15312.1| MutS2 family protein [Ruminococcus bromii L2-63]
Length = 787
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 255/817 (31%), Positives = 404/817 (49%), Gaps = 106/817 (12%)
Query: 17 LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L++ ++LL QT A+A+ + + +G L A +G L+ E+ +V TLR +
Sbjct: 39 LKKVEQLLQQTDDAVALSGRFGAPSFGGAGNCSGHLRRAQAGGCLTTGELLSVASTLRTI 98
Query: 76 NNV--WKKLTE--AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
V W + A+ LDG +S L+ + FL E+KI I + I D+A
Sbjct: 99 RTVKEWHARSGGGASSLDG----YFSGLV----SNKFL---EDKITSAIISEEEIS-DKA 146
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGIKASHK 187
S L IR R + S ++V +I + K L +T+R R V +++ +
Sbjct: 147 SPVLSDIR----RKIRTASSKAREVLDKIIHSSTYIKYLQDTIVTQRDGRYVVPVRSECR 202
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P G+ + SSSGAT F+EP G V+ NN L + E E IL L+A
Sbjct: 203 GNVP-GLVHDTSSSGATVFIEPMGVVQANNDIKLLQSKEEQEIERILFELSANAGDFADS 261
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
I + +++++L FA+A A M PI++ + + + +HPL+
Sbjct: 262 IIHSYKNLVQLNLIFAKADLAYSMKASKPIMNDRGMIELKQA------RHPLI------- 308
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ N + VP+D+ + E +VITGPNTGGKT +
Sbjct: 309 ------DKNKV----------------------VPVDVMLGKEFDTLVITGPNTGGKTVT 340
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM+ GL +P ++ L F +L DIGD QS+EQ+LSTFSGH++ IV I++
Sbjct: 341 LKTIGLLTLMAMCGLLVPCADNSELSVFRRVLVDIGDEQSIEQSLSTFSGHMTNIVQIIK 400
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
L + SL LIDE+G+GTDP EG ALA +IL+ LRD+ TTHYA+L + E
Sbjct: 401 LANAGSLCLIDELGAGTDPVEGAALAIAILERLRDKHAKIASTTHYAELKEFALRTPGVE 460
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
N + EF + TL+PTYR+L G G SNA I+K +G D +II RA +LV ++R+
Sbjct: 461 NGSCEFDVATLKPTYRLLIGVPGKSNAFAISKRLGIDDEIISRASELVS------NENRQ 514
Query: 548 SELYQSLMEERRK-LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
E +E+RR+ LE Q A L A+ ++ E+E + +RA K Q+ Q+
Sbjct: 515 FEDVVEKLEKRRQSLEKQLENANRLTAKANTEKQKAENEMQKAKQRAEREIEKARQEAQR 574
Query: 607 ELNFAKVQIDTVVQDFEN--QLRDASADEINSL---IKESESAIAAIVEAHRPDDDFSVS 661
++ + Q D V ++ E + +D S L I + E+ + + PD+++ +
Sbjct: 575 IISRTRAQADAVAEELEKARKAKDMSVQARTQLKKNIDKMEAHADPVKARNTPDEEYKLP 634
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
+ G+ V + + DK ATV+ P D VLVQ G ++ RV N+R + ++
Sbjct: 635 R------PLKVGDTVLIYDI-DKNATVLAPPNKDGVVLVQAGIIKTRVDIKNLRLLKSNN 687
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 781
+ PA +DR S + N + R +T +D+RG +A + +D A
Sbjct: 688 K-----PA-------KDRFS---STRNVPSRMDVRPET---EVDVRGETAFDAINIVDKA 729
Query: 782 L--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
+ A S + +IHG GTGV+K + + L+ + V
Sbjct: 730 IDNAVLSGVSKMTIIHGKGTGVLKREINKYLKTNKAV 766
>gi|427405780|ref|ZP_18895985.1| MutS2 family protein [Selenomonas sp. F0473]
gi|425708621|gb|EKU71660.1| MutS2 family protein [Selenomonas sp. F0473]
Length = 785
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 255/826 (30%), Positives = 394/826 (47%), Gaps = 131/826 (15%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ A+ ++Q Q I D+ IL A G +L E+ + T++ + N+ K
Sbjct: 45 RLHEETAEAVRVLQIQTPPFGGICDLRHILQKATLGSVLEVEELREIMSTMQGMRNI-KY 103
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
AE + L+ + +E+L LE ++ ID R LEL R
Sbjct: 104 FFRDAEFELPLLKEQTIRIEILGM------LERRLQNTIDEHGNF---RDDASLELRRVT 154
Query: 142 RK------RNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R+ R E L ++L A Q FQ +P+IT R R + +K ++ P G+
Sbjct: 155 RELVSAQGRVKEKLSAILHDAAYQKCFQ-----EPIITVRDERYVIPVKQEYRNQFP-GV 208
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ S+SGAT F+EP VE NN ++ + E IL LT EIA S +
Sbjct: 209 IHDQSASGATLFVEPLATVELNNTVRQMEIAREHEIQRILQQLTQEIASSSDILSENCTI 268
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +D FARAG A MD P+ + +V + +HPLL +
Sbjct: 269 LAGLDFIFARAGLAHNMDAYAPVFNRSRYVRLRRA------RHPLLPKEQV--------- 313
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
VPIDI++ + V++ITGPNTGGKT SMKTLG+
Sbjct: 314 --------------------------VPIDIELGRDFSVLLITGPNTGGKTVSMKTLGIL 347
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM+++G +LP LP + I ADIGD QS+EQ+LSTFS H IV IL+ E L
Sbjct: 348 ALMAQSGCFLPTAPGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAGGEDL 407
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
VL+DE+G+GTDP EG ALA SI++YL + V TTHYA L NA+ EF
Sbjct: 408 VLLDEVGAGTDPDEGAALARSIIEYLLHKHISVVATTHYAALKTYAYGRKGVMNASVEFD 467
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LVERLRPERQ 543
+ TLRPTYR+L G+ G SNA +I++ +G ++I+ RAQ+ +V L E++
Sbjct: 468 IATLRPTYRLLIGTPGASNAFSISRRLGLSQEIVARAQQYINEDHVRFEIIVNELEQEKR 527
Query: 544 QHRKS-------ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
++ K E S++EER +E +HA DL + +EA ++ R A
Sbjct: 528 EYEKKHNELRVREQKFSVLEERLHIERD----KFIHAH-RDLLHKAREEANNIVREARRN 582
Query: 597 KAKETQQVQQELNFAKV-QIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
+ + ++++ + V + V+Q QL+DA I +S +A ++ R +
Sbjct: 583 AEETIKTLKEQFDDHGVKERRKVIQSVREQLKDA-------YIPQSMTAGISVGTKIRAE 635
Query: 656 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
D Q G+ V++K+L + TV+ V ++ + VQ G +R VK N
Sbjct: 636 D-------------IQRGDIVYIKNLARE-GTVLSV--HENELTVQVGGLRTIVKINACT 679
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
I SK+K +K++ ++ + ++ S + A P++ D+RGM V EA
Sbjct: 680 FI--SKKK---------QKRRVEKVNIASSISQKSAHIRPQI-------DVRGMTVSEAE 721
Query: 776 HQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
L I A + S + +IHG GTG ++ + + L+ H V +
Sbjct: 722 LSLSKFIDDAVFTGLSNILIIHGKGTGALRLGIRDYLKRHKSVLSF 767
>gi|383754385|ref|YP_005433288.1| putative MutS2 protein [Selenomonas ruminantium subsp. lactilytica
TAM6421]
gi|381366437|dbj|BAL83265.1| putative MutS2 protein [Selenomonas ruminantium subsp. lactilytica
TAM6421]
Length = 792
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 259/827 (31%), Positives = 406/827 (49%), Gaps = 105/827 (12%)
Query: 26 QTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA 85
QT+ A+ ++ L I DI +L A G +L E+ + T+ A+ + K
Sbjct: 49 QTTEAVKVLSMSAPPLGGIRDIRLLLKKAGKGAILELEELQNIMSTMYAMRTI-KYFFRD 107
Query: 86 AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK-- 143
E++ LQ ++ LE+L +LE + ID + D AS +L IR E K
Sbjct: 108 LEMESPILQEWARSLEIL------GQLERNLNNVIDEHGNMRED-ASVELRRIRRELKSS 160
Query: 144 --RNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
R + ++++L A Q +FQ ++T R R + +KA ++ P G+ + S+
Sbjct: 161 QTRIKDKINAILHDGAYQKMFQ-----DAIVTVRDERYVIPVKAEYRAHFP-GLIHDQSA 214
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
SG+T F+EP VE NN +L+ +E E IL L+ EI + + + + + +ID
Sbjct: 215 SGSTLFIEPMAVVELNNDVKQLTLAEQQEIQRILRQLSGEIQREKETLSANCEILGDIDF 274
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
FA+A A M V P+L+ + ++ +HPL+
Sbjct: 275 TFAKARLANAMKAVRPLLNEEGRTVLSNA------RHPLI-------------------- 308
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
D VP I + + R+++ITGPNTGGKT +MKTLGL LM++A
Sbjct: 309 ---------------AVDKVVPTTISIGQDYRMLLITGPNTGGKTVTMKTLGLLVLMAQA 353
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
GLYLP + + I ADIGD QS+EQ+LSTFS H++ IV IL+ V + L+L+DE+
Sbjct: 354 GLYLPVDQGSEIALYANIYADIGDEQSIEQSLSTFSAHMTHIVSILDKVESDDLLLLDEL 413
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP EG ALA SIL+ L + + TTHY++L ENA EF +ETLRP
Sbjct: 414 GAGTDPEEGAALAMSILEKLLEVQATTIATTHYSELKTFAYTREGIENACVEFDIETLRP 473
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL-YQSLMEERR 559
TYR+L G G SNA I+K +G +I RAQ+LV + + +H +EL + +M E+R
Sbjct: 474 TYRLLIGIPGASNAFAISKRLGLADSLILRAQQLV-KADHAQFEHVINELENEKMMYEQR 532
Query: 560 K---LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
E QAR L +++ E+ + D+ R+A A +Q ++E
Sbjct: 533 NADIAERQARV-KKLEEKLLKAKEELSQKKGDIIRKAKDKSAALIRQTRRE--------- 582
Query: 617 TVVQDFENQLRDASADE-INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP----Q 671
++ NQL++ D+ I + + ++A A I EA + +++ +
Sbjct: 583 --SEEVINQLKEQFDDQGIRARQQAIQNARAKINEASAKANPGIMAQKGVGQRIDLKKIR 640
Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
G+ V+VK L D+ TV+E+ G D T VQ G +R ++K AN
Sbjct: 641 VGDTVYVKKL-DQKGTVLEIQGKDLT--VQVGALRTKLK---------------ANACTF 682
Query: 732 LRKQQEDRQSGSAGS--SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWES 787
L + E++ + GS +++ S+ + Q +D+RGM V+EA L I A
Sbjct: 683 LAHKVEEKPGVNTGSRKNSQSGSFLQKTQNIGRDIDIRGMMVDEAEMTLGKFIDDAVIAG 742
Query: 788 RSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
S + +IHG GTG +++ V L+NH V + Q + +N G T A +
Sbjct: 743 LSQVLIIHGKGTGALRKGVHAYLKNHRNVLSF-QFADINEGGTGATV 788
>gi|416124432|ref|ZP_11595428.1| mutS2 protein [Staphylococcus epidermidis FRI909]
gi|319401542|gb|EFV89752.1| mutS2 protein [Staphylococcus epidermidis FRI909]
Length = 782
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 249/812 (30%), Positives = 397/812 (48%), Gaps = 111/812 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM---EERRKLESQARTAASLH 572
+I+K +G II +A+ ++ E +S L Q+L ++R +L+ R A H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIES-LEQNLKRVDQQRIELDRLVREAQQTH 552
Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
+ Y++ ++ K L A K K Q+V+ A + D ++++ N LRD
Sbjct: 553 DALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRDYKGA 604
Query: 633 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLAT 687
E +KE E I + + DD + V ++ G++V V S G K
Sbjct: 605 E----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQK-GE 655
Query: 688 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 747
V+E+ GD++ V VQ G +++++ PI + ++ P +++R
Sbjct: 656 VLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR-------- 700
Query: 748 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKER 805
QT K LDLRG R EEA ++LD L A + +++IHG GTG +++
Sbjct: 701 ----------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGALQKG 750
Query: 806 VLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
V + L+ H V ++ P +G TVA +K
Sbjct: 751 VQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|406981818|gb|EKE03215.1| hypothetical protein ACD_20C00234G0037 [uncultured bacterium]
Length = 790
Score = 291 bits (745), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 233/807 (28%), Positives = 392/807 (48%), Gaps = 91/807 (11%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L N T A + + L I +I ++N A GQ L ++ + T+ A +
Sbjct: 48 ELQNTTEAKFLLDLAISPPLGGIRNITELINCAKIGQTLRNQDLIDIASTIGASRRLKSF 107
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTE-LEEKIGFCID--CKLLIILDRASEDLELI 138
++ Q +P L L+ F + LEE I D C+ ++D AS +L+ +
Sbjct: 108 FSK--------YQEETPNLFLVSQNLFENKILEEDIINTFDDSCE---VVDNASPELKRL 156
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R+ K NL + L + + + +P+ T R R + +K +K + GI +
Sbjct: 157 RSSYKDQTYNLKNKLNSIINSAEYSKFLQEPVYTLRGDRYVIPVKIEYKSNV-QGIVHDS 215
Query: 199 SSSGATYFMEPKGAVEFNN----MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
SSSGAT F+EPK VE NN +E+++ + E IL+ L+ + +EI+Y +D
Sbjct: 216 SSSGATLFIEPKSIVELNNNLREIELKIDH----EIKRILAELSNRVGAQAQEIEYTLDS 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ E+D FA+A ++ + P ++++ ++S +KHP+L+ S
Sbjct: 272 LAELDFIFAKAKYSILLKATEPAINTERYISLTR------VKHPILITS----------- 314
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
+EN IS+ ++++ + ++ITG NTGGKT +KT GL
Sbjct: 315 -------IENV----------ISN-----NVEIGKDWSSLIITGSNTGGKTVILKTTGLC 352
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
LM+KAGL++PA+ P F I ADIGD QS+ QNLSTFSGH++ I+ IL + ESL
Sbjct: 353 VLMAKAGLHIPAQEADIYP-FKNIFADIGDEQSVIQNLSTFSGHMTNIISILNQLDNESL 411
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
VL+DEIG+GTDPSEG ALA +IL+ L + +VTTHY +L L F NA+ EF
Sbjct: 412 VLLDEIGAGTDPSEGSALAQAILEALHKKGARTIVTTHYGELKALAYTQEGFYNASVEFD 471
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
+++L PTY+++ G G SNA+ IAK++G +I AQ + Q+ E+ + L
Sbjct: 472 IDSLAPTYKLIMGLPGKSNAITIAKNLGLSAEISDNAQNIY-----ITQKDPTGEIMEGL 526
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
+++L A+ S E+ L E + + ++ + ++ E+ A+ +
Sbjct: 527 QNTQQELSRNAQKIESTKEELERLETEYNQKLEKINSEKKYALNVYKKKFDTEITKARAE 586
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
I ++++ + A ++ + E ES I + D + N + G
Sbjct: 587 IKEILEETRRTKSEKVARRASNRLSEIESIQRNISAQDQEDLEPQYEPINWDDI--KVGS 644
Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 734
V +K L + A ++ +P + V VQ G ++ VK + + +S K +P P+ R
Sbjct: 645 PVFIKGLNQE-AILLSMPDKNKNVQVQVGLLKTTVKIQKL--VKSSSIKPKEDPIPKNRA 701
Query: 735 QQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLF 792
+ + N++DLRG RVE+ ++D L A + + ++
Sbjct: 702 NK----------------FKLSRTNINNTIDLRGKRVEDGLTEVDHYLDQASLANLTPVY 745
Query: 793 VIHGMGTGVVKERVLEILRNHPRVAKY 819
+IHG GTG ++E + + L+ P VAK+
Sbjct: 746 IIHGHGTGALREAIRDYLKTSPYVAKF 772
>gi|292670925|ref|ZP_06604351.1| DNA mismatch repair protein MutS [Selenomonas noxia ATCC 43541]
gi|292647546|gb|EFF65518.1| DNA mismatch repair protein MutS [Selenomonas noxia ATCC 43541]
Length = 785
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 244/822 (29%), Positives = 391/822 (47%), Gaps = 91/822 (11%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ AL + Q QP I D+ IL A+ G +L E+ +V T+ ++ N+
Sbjct: 45 RLHQETAEALQVQQIQPPPFGGIYDLRVILKKALMGSVLELDELRSVMSTMSSMRNMKYF 104
Query: 82 LTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ L + PLL+ + + L +E + ID + D AS +L I
Sbjct: 105 FRD--------LMQDVPLLKSMARPIEVLGIVERHLKDTID-EHGNFRDDASPELRRITC 155
Query: 141 E----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
E + R + L ++L Q + + ++T R R + +K ++ P G+
Sbjct: 156 ELQTAQTRVKDRLSAILHDAVNQKY----FQEAIVTVRDERYVIPVKQEYRNYFP-GVIH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NNM +L + E IL LTAEIAK+ + +
Sbjct: 211 DQSTSGATLFVEPLATVELNNMVRQLGIAREQEIQRILQKLTAEIAKNADILADNCKILA 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
EID FAR G A+ M+ PIL+ D + ++ +HPLL
Sbjct: 271 EIDFVFARGGLAREMEAYPPILNR------DGVVRLKRARHPLLQ--------------- 309
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
D VPIDI++ +++ITGPNTGGKT SMKTLGL +L
Sbjct: 310 --------------------KDKVVPIDIELGSAFSILLITGPNTGGKTVSMKTLGLLAL 349
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
++++G +LPA LP + I ADIGD QS+EQ+LSTFS H IV I+E L+L
Sbjct: 350 LAQSGCFLPAAPDSTLPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRIIEKAEPGDLIL 409
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP EG ALA SI+++ R + TTHYA L +NA+ EF L
Sbjct: 410 LDEVGAGTDPDEGAALARSIIEHFRTCHISVLATTHYAVLKTYAYTQPGIQNASVEFDLN 469
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTYR+L G G SNA +I++ +G + I+QRA+ + E H ++ +L +
Sbjct: 470 TLRPTYRLLMGIPGASNAFSISRQLGLSQDIVQRAELYIN----EEHMHF-DKVINALEQ 524
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
+++ E + E+ L + + ++ + R ++ K ++ + A+ +
Sbjct: 525 KKKDYEIKLDLLYKKEKEMTMLEARLREASEKIARSQKNILHKAREEANNIIRDARRTAE 584
Query: 617 TVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
++ + Q D E +I+++ + + A V+ + P ++ S+ +T S + G+
Sbjct: 585 ETIKSLKEQFDDHGVKERQKMIQDARNRLNEAYVQGYVPQNN-SIGKTVRPS-EIRNGDI 642
Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
V+++SL + TV+ V D ++VQ G +R +K N I + K K N
Sbjct: 643 VYIQSLAQE-GTVLSV--RDKELIVQVGGLRTTIKMNACTFIGHKKSKKDTNKV------ 693
Query: 736 QEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFV 793
G+S S R Q +D+RGM V EA L I A + S + +
Sbjct: 694 -------HIGASISRKSVEIRPQ-----IDVRGMTVSEAESVLGKFIDDAVFTGLSKVLL 741
Query: 794 IHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
IHG GTG +++ + L+++ V + G V +K
Sbjct: 742 IHGKGTGALRKGLQNYLKHNKFVLSFSFADISEGGTGVTIVK 783
>gi|422343730|ref|ZP_16424657.1| hypothetical protein HMPREF9432_00717 [Selenomonas noxia F0398]
gi|355378146|gb|EHG25337.1| hypothetical protein HMPREF9432_00717 [Selenomonas noxia F0398]
Length = 785
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 244/822 (29%), Positives = 391/822 (47%), Gaps = 91/822 (11%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ AL + Q QP I D+ IL A+ G +L E+ +V T+ ++ N+
Sbjct: 45 RLHQETAEALQVQQIQPPPFGGIYDLRVILKKALMGSVLELDELRSVMSTMSSMRNMKYF 104
Query: 82 LTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ L + PLL+ + + L +E + ID + D AS +L I
Sbjct: 105 FRD--------LMQDVPLLKSMARPIEVLGIVERHLKDTID-EHGNFRDDASPELRRITC 155
Query: 141 E----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
E + R + L ++L Q + + ++T R R + +K ++ P G+
Sbjct: 156 ELQTAQTRVKDRLSAILHDAVNQKY----FQEAIVTVRDERYVIPVKQEYRNYFP-GVIH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NNM +L + E IL LTAEIAK+ + +
Sbjct: 211 DQSASGATLFVEPLATVELNNMVRQLGIAREQEIQRILQKLTAEIAKNADILADNCKILA 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
EID FAR G A+ M+ PIL+ D + ++ +HPLL
Sbjct: 271 EIDFVFARGGLAREMEAYPPILNR------DGVVRLKRARHPLLQ--------------- 309
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
D VPIDI++ +++ITGPNTGGKT SMKTLGL +L
Sbjct: 310 --------------------KDKVVPIDIELGSAFSILLITGPNTGGKTVSMKTLGLLAL 349
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
++++G +LPA LP + I ADIGD QS+EQ+LSTFS H IV I+E L+L
Sbjct: 350 LAQSGCFLPAAPDSTLPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRIIEKAEPGDLIL 409
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP EG ALA SI+++ R + TTHYA L +NA+ EF L
Sbjct: 410 LDEVGAGTDPDEGAALARSIIEHFRTCHISVLATTHYAVLKTYAYTQPGIQNASVEFDLN 469
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTYR+L G G SNA +I++ +G + I+QRA+ + E H ++ +L +
Sbjct: 470 TLRPTYRLLMGIPGASNAFSISRQLGLSQDIVQRAELYIN----EEHMHF-DKVINALEQ 524
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
+++ E + E+ L + + ++ + R ++ K ++ + A+ +
Sbjct: 525 KKKDYEIKLDLLYKKEKEMTMLEARLREASEKIARSQKNILHKAREEANNIIRDARRTAE 584
Query: 617 TVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
++ + Q D E +I+++ + + A V+ + P ++ S+ +T S + G+
Sbjct: 585 ETIKSLKEQFDDHGVKERQKMIQDARNRLNEAYVQGYVPQNN-SIGKTVRPS-EIRNGDI 642
Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
V+++SL + TV+ V D ++VQ G +R +K N I + K K N
Sbjct: 643 VYIQSLAQE-GTVLSV--RDKELIVQVGGLRTTIKMNACTFIGHKKSKKDTNKV------ 693
Query: 736 QEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFV 793
G+S S R Q +D+RGM V EA L I A + S + +
Sbjct: 694 -------HIGASISRKSVEIRPQ-----IDVRGMTVSEAESVLGKFIDDAVFTGLSKVLL 741
Query: 794 IHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
IHG GTG +++ + L+++ V + G V +K
Sbjct: 742 IHGKGTGALRKGLQNYLKHNKFVLSFSFADISEGGTGVTIVK 783
>gi|456014379|gb|EMF47994.1| Recombination inhibitory protein MutS2 [Planococcus halocryophilus
Or1]
Length = 786
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 245/791 (30%), Positives = 386/791 (48%), Gaps = 98/791 (12%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G LSP E+ V T+RA + + ++ E + + D +Q LE ++ LT LE I
Sbjct: 82 GGSLSPMELMEVSSTVRA-SRILRQFFETIQ-EEDVVQ-IPHFLEKKESMPILTVLEHAI 138
Query: 117 GFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLI 171
CID + LD AS +L IR + R E L+SL++ K A+++ + ++
Sbjct: 139 NVCIDDNGGV-LDSASTELRSIRQQLRTQESRVRERLESLVRGKNASKM-----LSDSIV 192
Query: 172 TKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEET 231
T R R + +K ++ GI + SSSG T F+EP V+ NN RL E E
Sbjct: 193 TIRNDRFVIPVKQEYRSHY-GGIVHDQSSSGQTLFIEPDSVVQANNEVRRLKMKEKEEID 251
Query: 232 AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL +L+A++ + E+ L+D + EIDL A+A + G P ++++ + IN
Sbjct: 252 RILLMLSAQVQEVAHELFVLVDVLGEIDLILAKAKYGSAHKGTKPTMNTEGY------IN 305
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
++ +HP++ P D VP DI+ E
Sbjct: 306 LKKARHPMI----------------P-------------------RDEVVPNDIEFGREI 330
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+VITGPNTGGKT ++KT+GLA+LM+++GL +PA + L FD I ADIGD QS+EQ+
Sbjct: 331 TAIVITGPNTGGKTVTLKTVGLATLMAQSGLPVPALDGSELAVFDQIFADIGDEQSIEQS 390
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LSTFS H+ IVDIL SLV+ DE+G+GTDP EG ALA S+L + R + TT
Sbjct: 391 LSTFSSHMVNIVDILTKFDENSLVIFDELGAGTDPQEGAALAISLLDEVHGRGARVIATT 450
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY +L NA+ EF +ETL PTYR+L G G SNA I+K +G II A
Sbjct: 451 HYPELKAYGFNRPGVANASVEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLPEHIISHA 510
Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
+ + SL + RR+ E A + +E L +E+ + ++ ++
Sbjct: 511 KSFT-----GTDSKAVDSMIASLEKSRREAERDAERTQEVLSESEQLKKELAQQLEEYEK 565
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAI-V 649
+ + K ++ ++ ++ A+ + ++V+ + QL S+ +KE E A +
Sbjct: 566 QKEQREEKAKEKARKIVDEARAEAESVISELRKMQLNQGSS------VKEHELIYAKKRL 619
Query: 650 EAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
E P + ++ P Q ++V V S G K T+VE ++ + VQ G ++++
Sbjct: 620 EDAMPQNRILKKAAKDNAAKPLQPNDEVKVISFGQK-GTLVEKVSKNEWI-VQIGILKMK 677
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
+ ++++ + P KQ+E R A+ R K LDLRG
Sbjct: 678 LPESDL---------SFTKP----EKQKETRTM---------ATLKDRDSHVKMELDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESP 824
R E+A +++ L A + + +IHG GTG +++ V + L+ HPRV Y +
Sbjct: 716 ERYEDALARVEKYLDDALLSNYHQVSIIHGKGTGALRQGVQQYLKKHPRVKSYRFGEAGE 775
Query: 825 MNYGCTVAYIK 835
G TVA +K
Sbjct: 776 GGSGVTVAELK 786
>gi|410667688|ref|YP_006920059.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
gi|409105435|gb|AFV11560.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
Length = 793
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 246/856 (28%), Positives = 398/856 (46%), Gaps = 123/856 (14%)
Query: 11 IPFGKSLE---ESQKLLNQ----TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPS 63
+P+ + LE E +++L + T A A L + D+A +L A+ G +L P
Sbjct: 28 VPYVRELEPATEVEEILARQAETTEACHAWRLCPELSFDGVADLAPLLRRALIGGVLEPQ 87
Query: 64 EICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--D 121
++ + R TL+A + K L A G L R ++ C L+EKI CI D
Sbjct: 88 DLLSCRDTLQAGERLKKALLSA----GRELPRLQARARRIQECR---TLQEKINLCIQPD 140
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
+ I D AS +L +R + + + LL ++ ++ + +P+ T R R V
Sbjct: 141 GE---ISDSASPELARLRQQIRTLQVRIRGLLDEILSKPEWNRYLQEPIYTVRGDRYVVP 197
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+K H+ P G+ ++S SGAT FMEP V N + + EE IL LT +
Sbjct: 198 VKQEHRSQFP-GLVHDLSGSGATVFMEPLPLVGPMNELMAKRTAAHREEQRILEELTKMV 256
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A I+ + + E+D A+ + + G P + S +HPLL
Sbjct: 257 AAFHDAIQENLRILGELDFILAKGHLSSKLKGNPPRFGDGRCLVLKSG------RHPLLR 310
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
G VP+D+ + + ++ITGPNT
Sbjct: 311 GKV------------------------------------VPLDLHLGRDFDCLIITGPNT 334
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT+GL +M++AGL++PA LP + ADIGD QS+EQ+LSTFSGH+
Sbjct: 335 GGKTVALKTVGLLVVMAQAGLHIPAGERTVLPVLQNVFADIGDEQSIEQSLSTFSGHMKN 394
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV IL+ V SLVL+DE+G+GTDP +G AL +IL L ++ L + TTH+++L
Sbjct: 395 IVRILDQVGEGSLVLLDELGAGTDPEQGAALGMAILDRLINKGALIIATTHFSELKIFAH 454
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
R ENA+ EF TL+PTYR+ G G+SNA IA +G D ++++RA+ LRPE
Sbjct: 455 TRQRAENASVEFDSRTLQPTYRLSIGVPGESNAFEIAARLGLDSEVVERARSF---LRPE 511
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
Q S+L + L E++ S A AE+ L ++ E + L + + +
Sbjct: 512 --QRELSDLIKHLKEDQFAASSARAEAELERAEVEKLKEKLRREEERLRNKQQEILSMAH 569
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASA--------------DEINSLIKE-----SE 642
++ ++ + A+ + + +++ ++R A +++ I+E E
Sbjct: 570 EEARELVRTARREAEQLIRFLREKMRQEDARIALEEAQAVRQKLGDLSGRIEERAAATEE 629
Query: 643 SAIAA-IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
SA A I + +P D ++ P+F ++ V+ PG D VLVQ
Sbjct: 630 SAFAGDIPDTLKPGDVVAI---------PRFHQE----------GYVISPPGPDGEVLVQ 670
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G +++ + PI +R L++ ++ ++ + GS + + Q S
Sbjct: 671 VGALKLHL------PIKELRRS--------LKRDKQKKELTATGSRSGGRTIKEHAQVSP 716
Query: 762 NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
D RGMRVEE+ ++D L A + + +IHG GTG ++E V + L HP VA Y
Sbjct: 717 E-FDFRGMRVEESLKEIDKYLDAAYLAGINRVSLIHGKGTGALREAVRQYLSKHPFVASY 775
Query: 820 EQESPMNYGCTVAYIK 835
+ G V ++
Sbjct: 776 RNGNYYEGGTGVTIVE 791
>gi|33860777|ref|NP_892338.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|33633719|emb|CAE18676.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
Length = 803
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 250/859 (29%), Positives = 425/859 (49%), Gaps = 120/859 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
MG + +++IP E S++LL +T L + + S + DI+ + G
Sbjct: 41 MGENAILESEIP--TEYEISRRLLQETIEINELEKTLDKSISFSGVFDISKNIEICSKGG 98
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+++ SE+ + T+ A ++ K L LD ++ S L L + N ++E+ +
Sbjct: 99 VINSSELLEIAETISAAKDLKKIL-----LDFEARPFISSFLNRLIDHN---QIEKILKN 150
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK-------PLI 171
I+ I DRAS+ L +R D L KK +I I K +I
Sbjct: 151 GIESNGRI-SDRASQKLANLRQ---------DLLSKKSERRILVDKFIQKNINYIQDTII 200
Query: 172 TKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN----MEVRLSNSEI 227
R R V IK GI + S+SG T ++EP+ V N ME R++
Sbjct: 201 GDRYGRPVVAIKVQFGEKFK-GIIHDSSASGNTIYLEPESIVFKGNKIASMEARVA---- 255
Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
EE +L + ++ +++ + + D +L + A R+ ++ W+ G PI+ + +
Sbjct: 256 GEEFKLLKEWSQIVSDNDKSLIEMSDILLRTEHALIRSRYSNWIGGNAPIVEN------N 309
Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
+N+ G HPLL+ + + + PV ID +
Sbjct: 310 PIVNLIGFSHPLLIWENKKKEAPK----------------------------PVSIDFHI 341
Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 407
T+VV ITGPNTGGKT ++K LG+A LM+++GL++P+ +P +P+ I DIGD QS
Sbjct: 342 NRNTKVVAITGPNTGGKTVALKGLGIALLMARSGLFIPSIKNPIIPFCPNIFVDIGDDQS 401
Query: 408 LEQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
LE NLSTFSGHI RI +ILE ++ + S+VL+DEIGSGTDPSEG ALA ++L+
Sbjct: 402 LEGNLSTFSGHILRIRNILESLNNKKGLSVVLLDEIGSGTDPSEGTALAIALLKEFATLS 461
Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
+ + TTHY D+ LK D RFEN + F E+ +P Y + WG G SNAL+I++ IG D
Sbjct: 462 DITLATTHYGDIKALKYSDDRFENVSVAFDEESFKPRYTLNWGIPGRSNALSISRRIGID 521
Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 584
KI+ A L+P+ ++ S + + L +ER K ++ A AA L A L+ EI+
Sbjct: 522 EKILNEAANY---LKPKEVENINS-IIKGLEDERIKQQNSAEEAAELIARTEILHDEIKS 577
Query: 585 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE---INSLIKES 641
+ A ++ E Q++ + + AK ++ +++ ++Q +A+ ++ I +KE
Sbjct: 578 NYEFQKNNAEKIQESEKQKLSKYIRAAKKEVINLIKKLKDQ--NANGEDSRLIGIRLKEI 635
Query: 642 ESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 698
E +++TN + S++P+ G+ + +KSL + ++++ +
Sbjct: 636 EKE--------------HLTQTNINKEISWSPKIGDFIKIKSL-NSTGQIIDIDRKARSF 680
Query: 699 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 758
V+ G R + N + N ++ N N ++ +ED S+ +++
Sbjct: 681 EVKCGSFRSTLLINEFEGL-NGEKPNFKNSKIQINSVRED------------FSFS-KIR 726
Query: 759 TSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 818
T+KN++D+RGMRV EA ++ + + L+++HG+GTG +K+ +L L + V K
Sbjct: 727 TNKNTIDVRGMRVHEAEIIIEEKIRKF--HGPLWIVHGIGTGKLKKGLLIWLSSLHYVDK 784
Query: 819 YEQESPM--NYGCTVAYIK 835
E + GC++A+IK
Sbjct: 785 VEDAATNEGGSGCSIAWIK 803
>gi|224476251|ref|YP_002633857.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus carnosus subsp. carnosus TM300]
gi|254766600|sp|B9DPU2.1|MUTS2_STACT RecName: Full=MutS2 protein
gi|222420858|emb|CAL27672.1| MutS2-like protein [Staphylococcus carnosus subsp. carnosus TM300]
Length = 782
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 243/817 (29%), Positives = 394/817 (48%), Gaps = 121/817 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R ++ V N +K L+ + Y L
Sbjct: 65 LSGLTEVKPLIHRAKIGSILNVRELNQIKRLIQ-VQNQYKTFYSQL-LEEEEAINYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS +L+ IR+ +R +NLD ++K
Sbjct: 123 ERMAQLPILTDLYQEI--HQKCDAYDLFDDASHELQSIRSRIHSTSQRIKQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + +IT R R + +KA ++ +GI + SSSG T ++EP VE N
Sbjct: 181 SNQ----KKLSDAIITVRNDRHVIPVKAEYRQDF-NGIVHDQSSSGQTLYIEPSAVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E ILS+L+ E+A +E + + + V+ +ID A+A + Q + G
Sbjct: 236 NKISRLRNDEKVEVERILSVLSGEVA-AEADACLIAESVMGQIDFLTAKARYGQSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + + +V + HPLL + +N+ D++
Sbjct: 295 PEFTEERNVYLPKAF------HPLL------DRATVVANTIEFAEDIQ------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +PA + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPALDGSKLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
D + DIGD QS+EQ+LSTFS H+ IV+IL+ SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 DNVYCDIGDEQSIEQSLSTFSSHMKNIVEILKHADHNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL +++ L + TTHY +L NA+ EF + L PTY++L G G SNA
Sbjct: 434 ILDHVQKLGSLVMATTHYPELKAYSYNREGVMNASVEFDVNILSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
I+ +G II+ A+ L+ + + + + SL +K+E Q R A
Sbjct: 494 EISSKLGLSGNIIREAKSLI-----GQDEQEINNMIASLETNAKKVEDQRIELDRLLREA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
+H ++ Y + ++ K L A K K Q+V+ A + D +++D +
Sbjct: 549 KQVHGDLNKKYEQYQNYEKQLMDDA---KVKANQRVKA----ATKEADDIIKDLRHM--- 598
Query: 629 ASADEINSLIKESESAIAAIVEAHRP-DDDFSVSETNTSSFTP-----QFGEQVHVKSLG 682
DE N+ +KE E ++E + D+ + ++ + Q G++V V + G
Sbjct: 599 --RDEKNAEVKEHE-----LIEKRKHLDEQYEGTDIKQNVKKQKWDEIQAGDEVKVLTYG 651
Query: 683 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 742
K V+E+ DDD +VQ G +++++ PI + ++K A P +
Sbjct: 652 QK-GEVLEIL-DDDEAVVQMGIIKMKL------PIADLEKKKKAQEKP----------AK 693
Query: 743 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 800
+ +N A K LDLRG R EEA LD L A + +++IHG GTG
Sbjct: 694 TVSRTNRSA--------VKMELDLRGYRYEEAITALDQYLDQAMLSNYENVYIIHGKGTG 745
Query: 801 VVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H VA + P +G TVA +K
Sbjct: 746 ALQKAVQQHLKKHKNVASFRTGMPSEGGFGVTVAELK 782
>gi|225181647|ref|ZP_03735087.1| MutS2 family protein [Dethiobacter alkaliphilus AHT 1]
gi|225167628|gb|EEG76439.1| MutS2 family protein [Dethiobacter alkaliphilus AHT 1]
Length = 775
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 242/829 (29%), Positives = 396/829 (47%), Gaps = 102/829 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
LE +++ +T+ A+++++ + L + D+ IL+ A G +L ++ V R L+AV
Sbjct: 39 LELARRWQAETTEAVSLIKRNQIGLERVPDLRRILDVAARGSMLGEEQLFGVWRLLQAVT 98
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
+ E + Y L L + + L L E++ +D + + D+AS +L
Sbjct: 99 KLKGFFKEK--------EGYPVLTGLTRQMDALPNLREELKNTLDEEGRL-RDQASAELL 149
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+R ++L + + + L+T R R+ V I+ ++ +P G+
Sbjct: 150 RLRRSINGGEQDLRERFDRFVRNPGNHKALQENLVTVRGDRLVVPIRQEYRSQVP-GVVH 208
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP AVE NN L E E IL L+ + + +
Sbjct: 209 DQSASGATLFIEPLWAVEANNRLTVLRREEEKERERILVRLSQWAGGEKETLVTSLTLYA 268
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+D A+A + P L+ + ++ S +HPLL G
Sbjct: 269 ELDFIIAKARLSLAQKASEPKLNDRGYLHILSG------RHPLLTG-------------- 308
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
DV VPI +++ R +VITGPNTGGKT ++KT+GL S+
Sbjct: 309 ----DV------------------VPISLEMGENLRTLVITGPNTGGKTVTLKTVGLFSI 346
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA+ L F I ADIGD Q + Q+LSTFSGH+ I+DIL + SLVL
Sbjct: 347 MAQSGLHVPAEEGSELAVFPRIFADIGDEQDITQSLSTFSGHLKNIIDILGQLVPGSLVL 406
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP+EG LA +IL+YL + + V TTHY+ L ENA+ EF +
Sbjct: 407 LDEVGAGTDPTEGAGLAMAILEYLHNFGAVTVGTTHYSQLKTFAYVTQGMENASVEFDVA 466
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTY++L G G SNA IA+ +G D+ II+R ++ + +++ R E+ L+
Sbjct: 467 TLRPTYQLLVGVPGVSNAFAIAQRLGLDQDIIRRGKEFL-----SQEETRLEEVVADLVA 521
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
+R+++E +R + L +I+ E +DL RR + + K + Q+ + AK +
Sbjct: 522 DRQRIEVVSRQVEDERQQSKALLLQIQQEKEDLARRKSEILEKARRDAQETVISAKRE-- 579
Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP------ 670
Q QLR +A + L +E E+A + + D DF+ + + S+ P
Sbjct: 580 --AQQLLKQLRKMAA-AASPLQEEVENAAEKL---RKLDTDFTELQVSQSTSKPLSAEEL 633
Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
G +V+V SLG + TVV+ + VQ G MR+ V+ ++ + +K++ +P P
Sbjct: 634 TEGSEVYVNSLGQR-GTVVK--AGQSQIQVQVGMMRITVEPADLSYVKPTKKE---SPRP 687
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESR 788
+ D LDLRG ++EA+ +++ L A
Sbjct: 688 TTMVSRRD---------------------VPPELDLRGHTLDEAAMKVETYLDEAALAGL 726
Query: 789 SVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ +IHG GTG ++ + + L+ HP VA P G TV IK
Sbjct: 727 KEVRLIHGKGTGRLRAGLQDYLKGHPHVASMRMGQPAEGGTGATVIEIK 775
>gi|315658547|ref|ZP_07911419.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
M23590]
gi|315496876|gb|EFU85199.1| DNA mismatch repair protein MutS [Staphylococcus lugdunensis
M23590]
Length = 783
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 238/811 (29%), Positives = 388/811 (47%), Gaps = 108/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +L+ A G +L+ +E+ ++R ++ V N +K L+ D Q Y PLL
Sbjct: 65 LSGLSKVSPLLHRAKIGSVLNVTELNQLKRLIQ-VQNQFKTFYNQL-LEDDEQQVYYPLL 122
Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
+ + LT+L ++I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 HDNMMRLPVLTDLFQEINDKCDTHDL--YDHASYELQGIRSKISSTTQRIRQNLDRIVKN 180
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
+ Q + ++T R R + +KA ++ GI + S+SG T ++EP VE
Sbjct: 181 QSNQ----KKLSDAIVTVRNERNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEM 235
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN RL N E E IL++LT +A+ + + + +D A+A +A + G
Sbjct: 236 NNQVSRLRNDEAVERERILTILTTMVAQQAEQCLVAEEVMGHLDFLTAKARYASAIKGTK 295
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + ++ HPLL +N+ DVE
Sbjct: 296 PTFYEARTIYLPNAF------HPLL------DKETVVANTIEFADDVE------------ 331
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 332 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 374
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H+ IV IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 375 HDVFCDIGDEQSIEQSLSTFSSHMKNIVAILQQADKHSLILFDELGAGTDPSEGAALAMS 434
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 435 ILDYTRALGALVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
+I+K +G + II +A+ ++ E +LM E LE A+ + E+
Sbjct: 495 DISKKLGLNLSIINKAKTMIGTDEQEI----------NLMIE--SLEKNAKRVDTQRIEL 542
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DE 633
L +E + DL+++ +A E Q ++ + A ++ ++ + L++ D+
Sbjct: 543 DHLLKEAQQTHDDLEKQYNQFQAYEKQLIEDAKDKANQRVKAATKEADEILKELRTLRDQ 602
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+ +KE E I + + D+ + ++ G++V V S G K V
Sbjct: 603 KGADVKEHE----LIDKKKQLDNQYEAKSIKQQVQKQKYDKIVAGDEVKVLSYGQK-GEV 657
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ G+D+ V VQ G +++++ I + +K+K P +++Q
Sbjct: 658 LELVGNDEAV-VQMGIIKMKLP---IEDLEKTKKKQ-EKPTKMIKRQHR----------- 701
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LD+RG R EEA +LD L A + +++IHG GTG +++ V
Sbjct: 702 ---------QTIKTELDIRGHRYEEALIELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 752
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V + P +G TVA +K
Sbjct: 753 QQHLKRHKSVKSFRGGMPSEGGFGVTVAELK 783
>gi|302391195|ref|YP_003827015.1| MutS2 family protein [Acetohalobium arabaticum DSM 5501]
gi|302203272|gb|ADL11950.1| MutS2 family protein [Acetohalobium arabaticum DSM 5501]
Length = 801
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 249/834 (29%), Positives = 398/834 (47%), Gaps = 138/834 (16%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT--EAAELDGDSLQRYSP 98
L I+D+ L L+ E+ + TL N+ + L E E + S+ +Y
Sbjct: 66 LGGIKDVRDSLKRTSKEITLNGEELVEIADTLSTSRNLKRYLLNLEDEEDEYKSVVKYGT 125
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLK 154
L+ NF LE KI +D + +LD AS L IR +R + L+S+L
Sbjct: 126 QLD-----NF-KPLERKINKAVDNQG-NVLDTASTKLRNIRRSITDYSQRIKDKLNSILS 178
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
Q + I L+T R R + IK+ + + GI + S+S T F+EP V+
Sbjct: 179 SKKYQSY----IQDSLVTIRDKRYVIPIKSQFQEKVS-GIVHDQSASKQTVFIEPMAVVK 233
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
NN E E IL+ LT E+ + IK + + +D FA+A ++ ++G
Sbjct: 234 LNNKLRSFMAEEEEEVYRILTELTYEVREELDRIKETLKLLAWLDFTFAKAEYSFKIEGA 293
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P+L+ + + IN+E +HPL+ P
Sbjct: 294 EPVLNQEEY------INLEKARHPLI----------------P----------------- 314
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
D VPIDIK+ + +VITGPNTGGKT ++KT+GL +LM+++GL++PA + ++
Sbjct: 315 --QDEVVPIDIKLGGKFDTLVITGPNTGGKTVTLKTVGLLTLMAQSGLHIPALSGSKIAV 372
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
FD I DIGD QS+EQNLSTFS H++RI+DILE +LVL+DEIG+GTDP+EG ALA
Sbjct: 373 FDEIHGDIGDEQSIEQNLSTFSSHMTRIIDILETAQENNLVLLDEIGAGTDPTEGAALAM 432
Query: 455 SILQ--YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
+IL+ Y R R+ + TTHY+ L + +NA+ EF +ETL+PTYR+ G G S
Sbjct: 433 AILEELYSRGRIN-TIATTHYSQLKTFAYQQEGIQNASVEFDVETLQPTYRLQMGMPGRS 491
Query: 513 NALNIAKSIGFDRKIIQRA----------------------QKLVERLRPERQQHRKS-- 548
NA IA +G ++I++A Q +VE R++ +K+
Sbjct: 492 NAFEIAGRLGLPTEVIEKARAKLSEEDIEVDRIIQSIEESKQSIVENEEAARKERKKAKE 551
Query: 549 --ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
E Y++ +EE KLE + + A AE + I + K ++ +K K + QQ
Sbjct: 552 LKEEYETKLEEVEKLEQKIKKDAYAEAEKI-----IAESKKKVNEVVTEMKEK-AEVNQQ 605
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
E++ AK +ID + ++ D +D I+++ +D V
Sbjct: 606 EVDRAKSKIDEYKYNLSSERVDLESDLKQQRIQQN-------------SEDLEV------ 646
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
G++V +K L +K ++E+ D + ++Q G M+V V + + + S
Sbjct: 647 ------GDKVRLKKL-NKEGEIIELSEDKEEAVIQAGPMKVNVDISRLEQMDES------ 693
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN---SLDLRGMRVEEASHQLDIAL- 782
QQ + + S G +N+ + + S++ LDLRG+R EA ++D L
Sbjct: 694 -------DQQTEASNNSNGLNNDTNIGSLKNKKSRHISPKLDLRGLRAIEAKEKVDKYLD 746
Query: 783 -ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
A + S ++HG G+GV++E V ++L H ++ +Y G V +K
Sbjct: 747 DAYLANISKAEIVHGKGSGVLREVVHDLLDEHSQIDEYRLGGKDEGGSGVTIVK 800
>gi|168334894|ref|ZP_02693015.1| MutS2 family protein [Epulopiscium sp. 'N.t. morphotype B']
Length = 793
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 239/817 (29%), Positives = 390/817 (47%), Gaps = 150/817 (18%)
Query: 47 IAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNC 106
I G++ S G++L+ ++ R L+ ++ E + +SLQR+ L C
Sbjct: 80 IGGVIGS---GEILNIGKVLKTSRLLKKYSS-----EETTGITFNSLQRHFDSL-----C 126
Query: 107 NFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG-- 164
+ ELE +I CI I D S++ + +R M L +K I Q+
Sbjct: 127 TY-KELEYEIERCI-----IAEDEFSDEATPTLSNIRRQMTRLTIKVKDTIQNIIQSSQY 180
Query: 165 --GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
+ + ++T R R C+ IKA+ K GI + S SGAT F+EP VE NN L
Sbjct: 181 KDXLQESIVTVRDGRQCIPIKAAQKTAF-KGIVHDTSGSGATVFIEPAAVVEMNNKIREL 239
Query: 223 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
++E E IL+ + +I+ E+ ++E+D+ FA++ +A ++ P+L+ +
Sbjct: 240 MSAEQDEIQVILATFSEKISFITEELLLTFKSIIELDIIFAKSEYALKINARXPVLNEKG 299
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
+ IN++G +HPLL +++ VP
Sbjct: 300 Y------INLKGARHPLLNSTAV-----------------------------------VP 318
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
ID+ V E ++ITGPNTGGKT ++KT+GL ++M++ GL++PAK + L FD + A +
Sbjct: 319 IDVYVGKEFTTLLITGPNTGGKTVTLKTIGLFTIMAQCGLFIPAKENSELAIFDDVFAGL 378
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QS+EQ+LSTFS H+ +++IL ++ SL+L+DE+GSGTDP EG ALA SIL++LR
Sbjct: 379 GDEQSIEQSLSTFSAHMMNLIEILADMTTNSLILLDELGSGTDPVEGAALAMSILEHLRK 438
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
+ V TTHY++L ENA EF ++ LRPTY++L G G SNA I+K +G
Sbjct: 439 QQITTVATTHYSELKLYALSTPNVENAGCEFDIQELRPTYKLLIGVPGKSNAFEISKKLG 498
Query: 523 FDRKIIQRAQ-----------------------KLVERLRPERQQHRKSELYQSLMEERR 559
F +I A+ LVE+ + + L +S+ +ER+
Sbjct: 499 FPEHLIDDAKVFLQKENVKMEDILVELEYSKRTALVEKENALKFRQEAETLKESIKKERQ 558
Query: 560 KLE-SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE--LNFAKVQID 616
KLE S+ + + +L RE+E E +++ KE +Q+ +E +N + +
Sbjct: 559 KLEVSRQKILKRAEEKGKELLREVEIETENI--------LKEVRQMARESLINVDENTLQ 610
Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 676
++ Q +N + + EI+ I ++ + + + GE+V
Sbjct: 611 SIKQKVQNT-KLTKSSEIDKKIGYTKPKPKVLKDV-------------------KVGEEV 650
Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 736
V S ++ V V ++ T VQ G + + V+ ++I S+ A N + L
Sbjct: 651 LVISF-NQSGIVTNVSNNEAT--VQLGILPITVRLDDI-----SRNVQATNKSKNL---- 698
Query: 737 EDRQSGSAGSSNEEASYGPR-VQTSKNSLDLRGMR----VEEASHQLDIALACWESRSVL 791
++N+ S+ R T + +DLRGM +E AS LD A +
Sbjct: 699 ---------TTNQNISHNVRKTMTIRPEIDLRGMTGDEAIEAASQYLDDAYLSGLKN--V 747
Query: 792 FVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+IHG GTGV++E + +LR P V Y P YG
Sbjct: 748 TIIHGKGTGVLREAIKNMLRKIPHVQSYR---PGKYG 781
>gi|125973529|ref|YP_001037439.1| MutS2 family protein [Clostridium thermocellum ATCC 27405]
gi|281417732|ref|ZP_06248752.1| MutS2 family protein [Clostridium thermocellum JW20]
gi|229486373|sp|A3DE67.1|MUTS2_CLOTH RecName: Full=MutS2 protein
gi|125713754|gb|ABN52246.1| MutS2 family protein [Clostridium thermocellum ATCC 27405]
gi|281409134|gb|EFB39392.1| MutS2 family protein [Clostridium thermocellum JW20]
Length = 793
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 243/815 (29%), Positives = 392/815 (48%), Gaps = 94/815 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+E +QK + A +A + P+ I DI L G +L+P E+ LRAV
Sbjct: 43 VERAQKETSDAVAFIARRGTPPM--GGIHDIRDSLKRVEIGAILNPGELLKTADVLRAVR 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
N+ K + D S L+ L++ +E++I I + I D AS L
Sbjct: 101 NL-KSYASNDRIKTDEDNIVSELIGCLESNK---RIEDRIYMSILSEDEIA-DNASPTLA 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + + E++ L + I +P++T R R + +K ++ +P G+
Sbjct: 156 NIRRQIRNAQESIKDKLNDIIRSSRYQKYIQEPIVTLRGDRYVIPVKQEYRTEIP-GLIH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NN L E AE IL LT EI +K + +
Sbjct: 215 DSSASGATIFIEPMAVVEANNHIRELKIKEQAEIEKILGELTGEIRGIVDSLKSNVSILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D FA+A + + VCP+L+ + I I+ +HPLL
Sbjct: 275 RLDFIFAKARLSLDYNCVCPVLNDEH------KILIKKGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ TV VPID + + +V+TGPNTGGKT ++KT+GL +L
Sbjct: 313 --------DKKTV-----------VPIDFWIGEDFNTLVVTGPNTGGKTVTLKTVGLFTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA ++ F + ADIGD QS+EQ+LSTFS H+ IV IL+ V +SLVL
Sbjct: 354 MTQAGLHIPANEGTKMSIFKKVYADIGDEQSIEQSLSTFSSHMKNIVGILKDVDEDSLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP+EG ALA SIL+YLR++ V TTHY+ L ENA EF++E
Sbjct: 414 FDELGAGTDPTEGAALAMSILEYLRNKGSTTVATTHYSQLKAYAVTTKFVENACCEFNVE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTYR+L G G SNA I+K +G II++A++ + + + ++ S+ +
Sbjct: 474 TLRPTYRLLIGVPGKSNAFAISKRLGLFDDIIEKAKEFL-----TQDDIKFEDMLMSIEK 528
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
+ E++ A S E L +E+E++ + L L + + ++ L A+ + +
Sbjct: 529 NLNQSENEKMKAESYRLEAEKLKKELEEQKRKLAENRERLIQEARAEARKILLEARKEAE 588
Query: 617 TVV-------QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
++ Q+ N R A+E+ +K +I +E ++ N
Sbjct: 589 EIISKMRRLEQEVHNAQRQKEAEELRLKLKRKVDSIEETLE-------LPLAPKNALVKP 641
Query: 670 PQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P+ G+ V + +L D+ TV+ P D V+VQ G M++ V +N++ + ++K
Sbjct: 642 PENLKPGDSVLIVNL-DQKGTVITPPDKDGEVVVQAGIMKINVHISNLKLV--DEQKIVL 698
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
N + G G S + ++ +D+RG +EEA +D L A
Sbjct: 699 N----------NSGIGKIGMS--------KAKSISTEIDVRGYNLEEAIESVDKYLDDAY 740
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ + +IHG GTGV++ + + L++ RV +
Sbjct: 741 LSGLTEVSIIHGKGTGVLRSGIQKFLKSDSRVKSF 775
>gi|420198949|ref|ZP_14704633.1| MutS2 family protein [Staphylococcus epidermidis NIHLM031]
gi|394272635|gb|EJE17085.1| MutS2 family protein [Staphylococcus epidermidis NIHLM031]
Length = 782
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 245/816 (30%), Positives = 396/816 (48%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ + + + +SL + ++++ Q R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
H + Y++ ++ K L A K K Q+V+ A + D ++++ N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
E +KE E I + + DD + V ++ G++V V S G
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ GD++ V VQ G +++++ PI + ++ P +++R
Sbjct: 653 K-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAVLK 782
>gi|159901402|ref|YP_001547649.1| MutS2 family protein [Herpetosiphon aurantiacus DSM 785]
gi|159894441|gb|ABX07521.1| MutS2 family protein [Herpetosiphon aurantiacus DSM 785]
Length = 806
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 259/827 (31%), Positives = 399/827 (48%), Gaps = 123/827 (14%)
Query: 26 QTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+TSAA A+++S + + D+ + A G +L S + + TL A+ ++L
Sbjct: 50 RTSAARALIESFADVSIGGARDVRPAVEHARRGGILEASRVQEIAATLGAM----RRLRG 105
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLT-ELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
+ PL E L N L E+E IG D + +LD AS +L +R+ +
Sbjct: 106 QVLRNHPDFVPLHPLAEQLPNLATLEHEIERTIG--PDGE---VLDSASAELGRLRSAIR 160
Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
L L+ + A + +P+IT R R V +KA + L GI + SSSGA
Sbjct: 161 VAFNRLQERLQAIINSSQYADVLQEPIITVRDGRYVVPVKAPQRRAL-RGIVHDQSSSGA 219
Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
T ++EP VE NN L +E E IL+ L+ +IA I ++ E+DLAFA
Sbjct: 220 TLYIEPLATVELNNQWRELQLAEREEIQRILAALSGKIANEGMPIIVGVEATAELDLAFA 279
Query: 264 RAGFAQWMDGVCPILSS---QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
+A ++ + P +++ + +S++++ +HPLL
Sbjct: 280 KAKYSISLRASQPAINTPVPADDLHPESTLSLLKARHPLL-------------------- 319
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
D VP D+ + T++++ITGPNTGGKT ++KT+GL +LM++A
Sbjct: 320 ---------------NQDLVVPTDVWLGGPTQMIIITGPNTGGKTVALKTVGLMALMAQA 364
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
GL++PA RLP F I ADIGD QS+EQ+LSTFS H++ I+ IL+ V+ +SLVL DE+
Sbjct: 365 GLHIPAHQGSRLPIFGKIFADIGDEQSIEQSLSTFSSHMTNIIQILDRVTPDSLVLFDEL 424
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP EG ALA +I++ L + LA+ T+HYA+L ENA+ EF +ETL P
Sbjct: 425 GAGTDPVEGAALARAIIERLLNVGCLAMATSHYAELKAFAYSTDGVENASVEFDVETLSP 484
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
TYR+ G G SNAL IA+ +G R +I+RA+ + R + +L ++ ER
Sbjct: 485 TYRLSIGLPGRSNALAIAERLGLKRDLIERARATI-----SRDNVQVEDLLAAIHRERTT 539
Query: 561 LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ 620
ES+A A L ED DR + L E + QQ ++ + Q+D ++
Sbjct: 540 AESEAARALELR----------EDAELVRDRLSRELYEFEQDREQQLASYQR-QLDDELR 588
Query: 621 DFENQLRDASADEINSL------IKESESAIAAIVE-----AHRPDDDFSVSETNTSSFT 669
+ +LR DE S+ ++++E ++ + E P V +
Sbjct: 589 EVRAELRRLR-DEFRSVSVSRQWMEQAEQRLSRVAERVPQTPTPPKAKVPVVPKVALAPL 647
Query: 670 P---QFGEQVHVKSLGDKLATVV-EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
P Q G+QV V S+ KL+ VV ++ + + VQ G R+RV +
Sbjct: 648 PRTIQVGDQVFVSSV--KLSGVVLDLDEEANEAEVQLGGFRLRVDLREL----------- 694
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEA--SYGPRVQTSKNS---------LDLRGMRVEEA 774
RL K AG+S +A Y P VQ N+ LD+RG R +
Sbjct: 695 -----RLEK---------AGTSPTQAVQKYVP-VQRMINTPPPPNVSMQLDMRGWRASDV 739
Query: 775 SHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
QLD L A + S + ++HG GTG +++ V +L+ HP V Y
Sbjct: 740 ESQLDHYLNDAYLANLSEVRLVHGKGTGALRQVVRTLLKRHPLVESY 786
>gi|420177446|ref|ZP_14683782.1| MutS2 family protein [Staphylococcus epidermidis NIHLM057]
gi|420180254|ref|ZP_14686509.1| MutS2 family protein [Staphylococcus epidermidis NIHLM053]
gi|394247830|gb|EJD93072.1| MutS2 family protein [Staphylococcus epidermidis NIHLM057]
gi|394251293|gb|EJD96392.1| MutS2 family protein [Staphylococcus epidermidis NIHLM053]
Length = 782
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 245/816 (30%), Positives = 396/816 (48%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ + + + +SL + ++++ Q R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
H + Y++ ++ K L A K K Q+V+ A + D ++++ N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
E +KE E I + + DD + V ++ G++V V S G
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ GD++ V VQ G +++++ PI + ++ P +++R
Sbjct: 653 K-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|317473450|ref|ZP_07932744.1| MutS2 family protein [Anaerostipes sp. 3_2_56FAA]
gi|316899100|gb|EFV21120.1| MutS2 family protein [Anaerostipes sp. 3_2_56FAA]
Length = 799
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 243/818 (29%), Positives = 382/818 (46%), Gaps = 108/818 (13%)
Query: 26 QTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
QT AL + Q + ++D+ L LS E+ + L AV N +
Sbjct: 49 QTQDALTRLYKQGSISFFGVQDLGASLKRLKMKGTLSAGELLEIAGLLEAVKNALAYGAQ 108
Query: 85 AAEL-DGDSL----QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
++ D DSL + P+ LLK+ E+I D AS L+ IR
Sbjct: 109 RDDMADADSLDSVFESLVPMDGLLKDIRHCIISPEEIS-----------DDASSALKDIR 157
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
K + + S L + + + L+T R R C+ +K ++ G+ + S
Sbjct: 158 RNMKLTNQKIHSQLTAMVSSSSNKDMLQDALVTMRNGRYCIPVKQEYRGQFK-GMIHDQS 216
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
SSG+T F+EP V NN L E E IL+LL+ + + + ++++D
Sbjct: 217 SSGSTLFIEPMAVVTLNNQLKELEGQEQTEIERILALLSEQASYDMDSLAQNQKLLVQLD 276
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
FA+A +A+ +G PI D INI+ +HPLL +P K
Sbjct: 277 FIFAKAKYAKDYNGSKPIFRE------DGVINIKQGRHPLL---------------DPKK 315
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VPI++ + ++VITGPNTGGKT S+KT+GL +LM +
Sbjct: 316 --------------------VVPINVSLGDAFSMLVITGPNTGGKTVSLKTVGLFTLMGQ 355
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
AGL++PA L ++ + ADIGD QS+EQNLSTFS H++ IV I++ R+SLVL+DE
Sbjct: 356 AGLHIPAFQGSSLGIYEEVFADIGDEQSIEQNLSTFSSHMTNIVSIIQNAHRDSLVLLDE 415
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+ GTDP EG ALA SIL L DR + TTHY++L ENA+ EF +ETL
Sbjct: 416 LCGGTDPVEGAALAISILTDLHDRGVKTMATTHYSELKMFALSTNGVENASCEFDVETLS 475
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
PTYR++ G G SNA I++ +G D II+ A ++ + +++++ +
Sbjct: 476 PTYRLMIGIPGKSNAFAISRKLGLDNHIIEHASDQIDESVKD---------FETILAD-- 524
Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE-------LNFAK 612
LE +T EI + +EIE K L R ++K K + +++ ++ AK
Sbjct: 525 -LEKSKQTIEQEQEEIFEYRKEIETLRKSLKERQENIKEKREKLLREAREEAYRIISEAK 583
Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP-- 670
D ++++ N+L+ S + N ++ S + + D + + P
Sbjct: 584 ETADETIKEY-NKLKKQSGKDANRKMEHMRSDLRGKMSGLEKDMAYRSKNRASKKHEPGD 642
Query: 671 -QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI---RPIPNSKRKNAA 726
Q G++V+V SL TV +P + VQ G MR ++ ++ + + KR+NA
Sbjct: 643 FQIGDEVYVTSLSLS-GTVQTLPNSKGDLYVQMGMMRSKINVKDLEITKSVKQVKRENAR 701
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALAC 784
N A R SG + N+ +S P + ++ GM V+EA LD I AC
Sbjct: 702 NEA---------RNSGRT-AINKSSSIRPEI-------NVLGMTVDEAVSHLDKFIDDAC 744
Query: 785 WESRSVLFVIHGMGTGVVKERV---LEILRNHPRVAKY 819
+ + VIHG GTG +++ V L+ L+ R++ Y
Sbjct: 745 LANLGQITVIHGKGTGALRKGVHNYLKTLKKQKRISGY 782
>gi|418324592|ref|ZP_12935826.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pettenkoferi VCU012]
gi|365225279|gb|EHM66524.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pettenkoferi VCU012]
Length = 783
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 241/810 (29%), Positives = 383/810 (47%), Gaps = 106/810 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I ++ A G +L+ +E+ ++R ++ V N +K D + + Y L
Sbjct: 65 LSGLAQIKPLIRRAQIGGVLNVTELNTIKRLIQ-VQNQFKTFYAQLLEDDEEVVHYPILH 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 124 ERMNELPVLTDLYRTIHDKCDAHDL--YDHASTTLQSIRSKISSTSQRIRQNLDRIVKSQ 181
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + ++T R R + +KA ++ +GI + SSSG T ++EP VE N
Sbjct: 182 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSSSGQTLYIEPSSVVEMN 236
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LTAE+A ++ + + ++++ +ID A+A +A+ +
Sbjct: 237 NQISRLRNDEAVERERILTELTAEVA-ADADGCLIAEQIMGQIDFLTAKARYARKIKATK 295
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + D S+ + HPLL +N+ DVE
Sbjct: 296 PEFTE------DRSVYLPKAFHPLL------DQETVVANTIEFAEDVE------------ 331
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M++AGL +P + +L F
Sbjct: 332 -----------------TVIITGPNTGGKTVTLKTLGLIIIMAQAGLLIPTLDGSKLGIF 374
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV ILE ++ SL+L DE+G+GTDPSEG ALA S
Sbjct: 375 ENVYCDIGDEQSIEQSLSTFSSHMKNIVSILEEATQNSLILFDELGAGTDPSEGAALAMS 434
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+ D L + TTHY +L NA+ EF + TL PTY++L G G SNA
Sbjct: 435 ILDYVHDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
+I+K +G KII +A+ ++ + + + +SL + ++++ Q L E
Sbjct: 495 DISKKLGLGMKIISKAKTMI-----GHDEQEINNMIESLEKNSKRVDEQRIELDRLLREA 549
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
D + ++E K HL + + Q + A + D +++D + AD
Sbjct: 550 QDTHDDLEQHYKKFKNYEQHLMNEARDKANQRVKAATKEADQILKDLRHMRDKKGAD--- 606
Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ------FGEQVHVKSLGDKLATVV 689
+KE E +++ + +D ++ Q G++V V + G K V+
Sbjct: 607 --VKEHE-----LIDKKKHLEDQYEEKSLKKDVKKQKWDEIHAGDEVKVLTYGQK-GEVL 658
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
E+ GDD+ V VQ G +++++ ++ K++ R
Sbjct: 659 ELVGDDEAV-VQMGIIKMKLPLKDLEKKKKEKQQPTKMVKRHNR---------------- 701
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 807
Q K LDLRG R EEA +LD L A + +++IHG GTG +++ V
Sbjct: 702 --------QNVKMELDLRGYRYEEALVELDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQ 753
Query: 808 EILRNHPRVAKYEQESPM--NYGCTVAYIK 835
E L+ H VA Y P +G TVA +K
Sbjct: 754 EHLKRHKSVASYRNGMPSEGGFGVTVAQLK 783
>gi|256003347|ref|ZP_05428338.1| MutS2 family protein [Clostridium thermocellum DSM 2360]
gi|385778551|ref|YP_005687716.1| MutS2 family protein [Clostridium thermocellum DSM 1313]
gi|419723621|ref|ZP_14250736.1| MutS2 protein [Clostridium thermocellum AD2]
gi|419724554|ref|ZP_14251616.1| MutS2 protein [Clostridium thermocellum YS]
gi|255992637|gb|EEU02728.1| MutS2 family protein [Clostridium thermocellum DSM 2360]
gi|316940231|gb|ADU74265.1| MutS2 family protein [Clostridium thermocellum DSM 1313]
gi|380772101|gb|EIC05959.1| MutS2 protein [Clostridium thermocellum YS]
gi|380780303|gb|EIC09986.1| MutS2 protein [Clostridium thermocellum AD2]
Length = 793
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 241/815 (29%), Positives = 392/815 (48%), Gaps = 94/815 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+E +QK + A +A + P+ I DI L G +L+P E+ LRAV
Sbjct: 43 VERAQKETSDAVAFIARRGTPPM--GGIHDIRDSLKRVEIGAILNPGELLKTADVLRAVR 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
N+ K + D S L+ L++ +E++I I + I D AS L
Sbjct: 101 NL-KSYASNDRIKTDEDNIVSELIGCLESNK---RIEDRIYMSILSEDEIA-DNASPTLA 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + + E++ L + I +P++T R R + +K ++ +P G+
Sbjct: 156 NIRRQIRNAQESIKDKLNDIIRSSRYQKYIQEPIVTLRGDRYVIPVKQEYRTEIP-GLIH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NN L E AE IL LT EI +K + +
Sbjct: 215 DSSASGATIFIEPMAVVEANNHIRELKIKEQAEIEKILGELTGEIRGIVDSLKSNVSILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D FA+A + + VCP+L+ + I I+ +HPLL
Sbjct: 275 RLDFIFAKARLSLDYNCVCPVLNDEH------KILIKKGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ TV VPID + + +V+TGPNTGGKT ++KT+GL +L
Sbjct: 313 --------DKKTV-----------VPIDFWIGEDFNTLVVTGPNTGGKTVTLKTVGLFTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA ++ F + ADIGD QS+EQ+LSTFS H+ IV IL+ V +SLVL
Sbjct: 354 MTQAGLHIPANEGTKMSIFKKVYADIGDEQSIEQSLSTFSSHMKNIVGILKDVDEDSLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP+EG ALA SIL+YLR++ V TTHY+ L ENA EF++E
Sbjct: 414 FDELGAGTDPTEGAALAMSILEYLRNKGSTTVATTHYSQLKAYAVTTKFVENACCEFNVE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTYR+L G G SNA I+K +G II++A++ + + + ++ S+ +
Sbjct: 474 TLRPTYRLLIGVPGKSNAFAISKRLGLFDDIIEKAKEFLTQ-----DDIKFEDMLMSIEK 528
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
+ E++ A S E L +E+E++ + L L + + ++ L A+ + +
Sbjct: 529 NLNQSENEKMKAESYRLEAEKLKKELEEQKRKLAENRERLIQEARAEARKILLEARKEAE 588
Query: 617 TVV-------QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
++ Q+ N R A+E+ +K +I +E ++ N
Sbjct: 589 EIISKMRRLEQEVHNAQRQKEAEELRLKLKRKVDSIEETLE-------LPLAPKNALVKP 641
Query: 670 PQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P+ G+ V + +L D+ T++ P D V+VQ G M++ V +N++ + + ++ +
Sbjct: 642 PENLKPGDSVLIVNL-DQKGTIITPPDKDGEVVVQAGIMKINVHISNLKLV-DEQKIVLS 699
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
N G G S + ++ +D+RG +EEA +D L A
Sbjct: 700 NSG-----------IGKIGMS--------KAKSISTEIDVRGYNLEEAIESVDKYLDDAY 740
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ + +IHG GTGV++ + + L++ RV +
Sbjct: 741 LSGLTEVSIIHGKGTGVLRSGIQKFLKSDSRVKSF 775
>gi|225018643|ref|ZP_03707835.1| hypothetical protein CLOSTMETH_02593 [Clostridium methylpentosum
DSM 5476]
gi|224948551|gb|EEG29760.1| hypothetical protein CLOSTMETH_02593 [Clostridium methylpentosum
DSM 5476]
Length = 795
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 235/738 (31%), Positives = 356/738 (48%), Gaps = 116/738 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
I D AS +L IR + ++N ++LD ++K A + +IT R R V +
Sbjct: 145 IDDNASVELSNIRRKIRQNSTKARDSLDRIIKN------NAKYLQDSIITMRDGRYVVPV 198
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEI 241
KA H+ +P G+ + S+SGAT F+EP VE NN E+R L + E E IL+ L+AE
Sbjct: 199 KAEHRGEVP-GLVHDTSASGATLFVEPMSVVEANN-EIRVLMSKEQDEIERILAELSAEC 256
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A I+ ++ ++L FA+A M V P ++ ++S + +HPL+
Sbjct: 257 ADFAESIRNNFRLIILLNLYFAKANLGASMRAVKPFVTDDGYISLKKA------RHPLI- 309
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
D VPIDI++ ++ITGPNT
Sbjct: 310 ----------------------------------DKDKVVPIDIELGRGFTSLIITGPNT 335
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT S+KTLGL +LM+ GL +P + R+ FD +L DIGD QS+EQ+LSTFS H++
Sbjct: 336 GGKTVSLKTLGLLTLMTMCGLLIPVADQSRISIFDKVLVDIGDEQSIEQSLSTFSAHMTN 395
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
I+ ILE SLVL+DE+GSGTDP EG ALA SI++ + R TTHYA+L
Sbjct: 396 IISILEEADDRSLVLVDELGSGTDPVEGAALAISIIEEISARGSRLAATTHYAELKAYAL 455
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA---------- 531
+ ENA EF + TL+PTYR+L G G SNA I++ +G + I+ RA
Sbjct: 456 ETKGVENACCEFDVATLQPTYRLLIGVPGRSNAFAISRRLGLEEHILDRAEGYISSDNRR 515
Query: 532 -QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
+ +V+ L RQ + K ER +LE + R L+A ++ + K L+
Sbjct: 516 FEDVVDSLEQARQDYEK---------ERAELEEKNREYERLNA-------QLNAKRKGLE 559
Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV- 649
H + ++ + ++ + + D ++ + E + ++ L + + S + +
Sbjct: 560 NAGEHEIERAREKAKYIVDKVRAESDALLNELEELRKQKEKTDVAELARRARSQMNGKIS 619
Query: 650 ----EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
EA+ + +ET + G++V V L DK A V+E P V+VQ G M
Sbjct: 620 RLYDEANPVRERMGTNETYKLPRPLRKGDEVLVYDL-DKQAVVLEEPDKSGNVMVQMGIM 678
Query: 706 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 765
+ RVK N+R I ++KN P+ + SN E S +K+ +D
Sbjct: 679 KTRVKLKNLRLI---EQKNPYKEKPK-------SSTTRTIKSNAERS-------AKSEID 721
Query: 766 LRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY---- 819
LRG VEEA LD I + + + +IHG GTGV++ V L+ H + Y
Sbjct: 722 LRGYTVEEALLDLDQFIDNCVLSNINQISIIHGKGTGVLRTAVQAHLKRHRSIKTYRLGT 781
Query: 820 --EQESPMNYGCTVAYIK 835
E ES G T+A +K
Sbjct: 782 YGEGES----GVTIAELK 795
>gi|157412576|ref|YP_001483442.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9215]
gi|157387151|gb|ABV49856.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9215]
Length = 810
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 256/855 (29%), Positives = 410/855 (47%), Gaps = 112/855 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
MG + IP E S++LLN+T L + + S + DI+ + G
Sbjct: 48 MGKRAILGFGIP--SEYELSKRLLNETVEINELENNLDKSISFSNVFDISRNIEICSKGG 105
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
++S SE+ + +T+ A N+ K LD + S + LL + N T K G
Sbjct: 106 VISSSELLEIAKTIAAARNLKKIF-----LDFEQRPYISSFTKNLLDHQNVETIF--KRG 158
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
+ + I D AS +L ++R E L KK+ +I I K L
Sbjct: 159 IESNGR---ISDNASNELSVLRKEL---------LSKKLERKILVEKFIQKNLAYLQDTT 206
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
I R R + +K ++ + GI + SSSG T + EP+ V N L AEE
Sbjct: 207 IGDRNGRPVLAVKVNY-VIKFKGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARITAEE 265
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSI 290
+L + ++ + + + +L ++ A R+ +++W+ G P +S
Sbjct: 266 FKLLKKWSQIVSDNSENLIEMASILLRLENALTRSRYSKWIGGKTPTFEKNPIIS----- 320
Query: 291 NIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE 350
+ G HPLL+ + + PV +D +
Sbjct: 321 -LVGFSHPLLIWEHKKKGAPP----------------------------PVAVDFHINRN 351
Query: 351 TRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQ 410
+VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSLE+
Sbjct: 352 IKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSLEE 411
Query: 411 NLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
NLSTFSGHISRI +IL+ ++ + S+VL+DEIGSGTDP EG ALA ++L+ ++ +
Sbjct: 412 NLSTFSGHISRIKEILDSLNNKRGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSDIT 471
Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
+ TTHY D+ LK D+RFEN + F ++L+P Y + WG G SNAL+I+K IG D I
Sbjct: 472 LATTHYGDIKALKYTDSRFENVSVVFDEDSLKPKYILNWGIPGRSNALSISKRIGLDENI 531
Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
+ A LRP ++ +E+ + L EER K ++ A AA L A L+ E++ +
Sbjct: 532 LNEA---ANYLRP-KEVDNINEIIKGLEEERIKQQNSAEAAAELIARTEILHDELKRNYE 587
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKESE 642
A ++ E ++ + + AK + V D +LRD + + I +KE E
Sbjct: 588 YQKINAEKIQEIERSKLSKHIVSAKKE----VIDLIKKLRDKNVNGEDTRIIGKRLKEIE 643
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
+ H F S S+ PQ G+ V +KSL + +V++ V+
Sbjct: 644 T-------EHLIQKKFKKS----ISWDPQVGDFVKIKSL-NSTGQIVDLDKKGGFYEVKC 691
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G R + N+ I N P ++ K + S+ E+ S+ +++TSKN
Sbjct: 692 GSFRSTLSVNDFEGI------NGEKPNFKMSKIE-------IKSTREDFSFS-KIRTSKN 737
Query: 763 SLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ- 821
++D+RG+RV EA ++ + + L+++HG+GTG +K+ + L V K E
Sbjct: 738 TIDVRGLRVHEAEIIIEEKIRKF--HGPLWIVHGIGTGKLKKGLRNWLSGLNYVDKIEDA 795
Query: 822 -ESPMNYGCTVAYIK 835
+ GC++A+IK
Sbjct: 796 ANNEGGAGCSIAWIK 810
>gi|325681531|ref|ZP_08161056.1| recombination and DNA strand exchange inhibitor protein
[Ruminococcus albus 8]
gi|324106798|gb|EGC01089.1| recombination and DNA strand exchange inhibitor protein
[Ruminococcus albus 8]
Length = 801
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 255/828 (30%), Positives = 385/828 (46%), Gaps = 110/828 (13%)
Query: 24 LNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
+ +T++AL M ++ +I +++ LN A +G LS E+ +++ L N + +
Sbjct: 49 VGKTASALEMSIKYGTPGFYSINNVSASLNRAKAGGTLSLGELLEIKKVLGQTNELTRWF 108
Query: 83 TEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
+A D S L E L N + LE I +D + L D AS +L IR +
Sbjct: 109 EQAE----DKSTPLSYLFEQLFPNKSLWQRLETAI---LDSENLS--DDASPELRSIRNK 159
Query: 142 RKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
+ E LD ++K + Q + + + ++T R R V +K K + G+
Sbjct: 160 IAKAGLKIRETLDKMIKSPSTQKY----LQESIVTMRDGRFVVPVKTEFKGNV-GGLVHG 214
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S++G+T F+EP VE NN L E E IL+ + E A + +I+ D ++
Sbjct: 215 TSATGSTLFIEPISVVEANNDIRILQGKEQDEIHRILTEFSKECAMMQPQIESSYDAAVK 274
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+DL FA+A M V P +S D I + +HPL+ + N
Sbjct: 275 LDLYFAKANLGAKMRAVNP------EISDDGVIVLNKARHPLI-------------DENK 315
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
+ VPI+ V+VITGPNTGGKT ++KT+GL +LM
Sbjct: 316 V----------------------VPINFSSGESYNVLVITGPNTGGKTVTLKTVGLLTLM 353
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
+ GL +PA + R+ + ILADIGD QS+EQ+LSTFS H+ + +ILE ESLVLI
Sbjct: 354 TMCGLLIPASDGCRISVYKKILADIGDRQSIEQSLSTFSSHMGNVREILEKADSESLVLI 413
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DE+GSGTDP EG ALA SI++ LR V TTHY ++ ENA+ EF +ET
Sbjct: 414 DELGSGTDPVEGAALAVSIIERLRQFGATVVTTTHYQEIKLYALDTDGVENASCEFDVET 473
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 557
++PTY+++ GS G SNA I+K++G D II A+ L+ R + +L
Sbjct: 474 MKPTYKLVIGSPGKSNAFAISKNLGIDDDIIAYAEGLI-----SEDNRRFETIIDNLERA 528
Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
R +LE R A AE L E+E++ K K + + EL A+ Q
Sbjct: 529 RIQLEENNRLAEKYRAEAEKLRNELEEQRK-----------KFYDEKENELEKARRQASD 577
Query: 618 VVQDFENQLRDASADEINSLIKESESA---IAAIVEAHRPDDDFS--------VSETNTS 666
+V + + + A DE++ L KE E + AI H+ + VSE
Sbjct: 578 IVNRVQRESQ-ALVDELDQLRKEKEKSGFTQKAIDARHKQKSTMNKLYKEANPVSEQADD 636
Query: 667 SFT-P---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ P + G+ V + + VV P D VQ G M+ ++ +R + K+
Sbjct: 637 DYVLPRPLKKGDTVLITDT-KRNGIVVTPPDDKGMCFVQAGIMKTKIDVKKLRLV--EKK 693
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--I 780
+ P P+ +K R + G N R T LD+RG +E H++D I
Sbjct: 694 QPVKTPQPQKKKP---RGVSTKGVENRMTR---RFST---ELDIRGYASDEGVHEMDSFI 744
Query: 781 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
S++ VIHG+GTGV+K + LR HP V + P YG
Sbjct: 745 DNCVMSGVSMVTVIHGIGTGVLKNAIRNHLRRHPSVKSFR---PGVYG 789
>gi|258515602|ref|YP_003191824.1| MutS2 family protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779307|gb|ACV63201.1| MutS2 family protein [Desulfotomaculum acetoxidans DSM 771]
Length = 786
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 239/828 (28%), Positives = 392/828 (47%), Gaps = 105/828 (12%)
Query: 24 LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L++T+ A M + +P D+ DI + A G +L ++ + TL A L
Sbjct: 48 LSETTEAREMFRLEPAADIGGWHDIRKSVIRAHQGAVLEAKDLSEIGETLAAARLARNYL 107
Query: 83 TEAAELDGDSLQRYSPLLELLKN-CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
E E + PLL + + +LE ++ I I DRAS+ L IR
Sbjct: 108 LERDE--------FYPLLAGIGSRITSFADLEHRLKNAI-LPGGEIADRASDALSQIRRR 158
Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
N ++ L+ + + P++T R R V +K ++ + GI + S+S
Sbjct: 159 ITNNRASVKERLEHIIRSPNYQKYLQDPIVTIREGRYVVPVKLEYRGQV-QGIVHDTSAS 217
Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
GAT F+EP VE NN RL +E E IL+ L+ +A+ + ++ + +D
Sbjct: 218 GATLFVEPMAVVEANNELRRLIAAEKQEIVKILTDLSCRVAQESEPLGVTLEALGHLDFV 277
Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 321
A+A + MD P+L +NI+ +HPLL G D
Sbjct: 278 LAKARLSSQMDAWAPVLVD------GPVVNIQKGRHPLLAG------------------D 313
Query: 322 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 381
V VP+ + + E ++ITGPNTGGKT ++KT+GL LM+++G
Sbjct: 314 V------------------VPVSVHLGKEFDSLIITGPNTGGKTVTLKTIGLLVLMAQSG 355
Query: 382 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIG 441
L++PA++ F+ + ADIGD QS+EQ+LSTFS H+S IV IL SLVL+DE+G
Sbjct: 356 LHIPAESSSETGIFEQVFADIGDEQSIEQSLSTFSSHMSNIVSILNQSGAGSLVLMDELG 415
Query: 442 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
+GTDP+EG ALA +IL+ L ++ V TTHY++L R ENA+ EF +L+PT
Sbjct: 416 AGTDPTEGAALAQAILEKLHEQKAKIVATTHYSELKNFAYAHRRVENASVEFDPISLKPT 475
Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 561
YR+L G G SNA IA +G + ++ RA+ + +Q SEL L +ER+
Sbjct: 476 YRLLIGKPGRSNAFEIALRLGLEPGVVSRARDFL-----TTEQIEISELMLRLEKERQAA 530
Query: 562 ESQART-------AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
E + R A L A +L + + ++ +D+ +A +K + +QE A +
Sbjct: 531 EEEKRIAELLRQDAEKLKARYTELEQMLREKREDILAKAHEEASKTVKNTRQEAEEAIKE 590
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ--- 671
++Q+ +N+L++ + E+ + IK + + E + P+
Sbjct: 591 FRGMLQENDNRLKEMAVQEVRNKIKGMQGRLR------------KAPEKSHGGVVPRELL 638
Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
GE+V + +L ++ V+ V D LVQ G M++ + ++R + +K++N+
Sbjct: 639 IGEEVFIPNL-NQQGYVLNVSTDGKEALVQVGIMKLNMPVKDLRKVDEAKKENSGKV--- 694
Query: 732 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRS 789
+ +G + ++E S LDLRGMR EEA +++ L A +
Sbjct: 695 -------QFAGLLKNKSQEIS---------TKLDLRGMRAEEAWLEVEKYLDDAFLAGLN 738
Query: 790 VLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
++V+HG GTG ++ + L+N RV + + G TV +K
Sbjct: 739 KIYVVHGKGTGALRAMIQRELQNSRRVKSFRLGEHGEGGAGVTVVDLK 786
>gi|83590547|ref|YP_430556.1| MutS2 family protein [Moorella thermoacetica ATCC 39073]
gi|83573461|gb|ABC20013.1| DNA mismatch repair protein, MutS family [Moorella thermoacetica
ATCC 39073]
Length = 801
Score = 289 bits (739), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 240/805 (29%), Positives = 378/805 (46%), Gaps = 103/805 (12%)
Query: 33 MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDS 92
+++ L L +DI +N A +G +L E+ V TL A + + L L+G+
Sbjct: 63 LLRYPDLPLGNFQDIRPEINRAAAGAILEGQELLRVATTLAAGRRLRQFLLG---LEGE- 118
Query: 93 LQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMEN 148
+ L L +LE I I L+ LD+A+ L + +R ++R E
Sbjct: 119 ---WPVLKGLAAGIGDFRQLERAITAAIGPDGLV-LDQATPRLASLRQQVRQAQERIKER 174
Query: 149 LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFME 208
LDS L+ Q + + L T R R + +K +++ +P G+ + S+SGAT F+E
Sbjct: 175 LDSYLRSTEMQKY----LQDNLFTIRNDRYVLPVKQEYRHQVP-GLVHDQSASGATLFIE 229
Query: 209 PKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
P VE NN RL +E E AIL L+ + + EI + + E+D A+ +
Sbjct: 230 PMALVELNNELRRLQTAEAREVEAILLHLSKLVGGQKEEILASLAALGELDFTLAKGRLS 289
Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
Q M V P L++ I +HPLL G
Sbjct: 290 QAMAAVPPRLNA------GGRWRIRQGRHPLLGGRV------------------------ 319
Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
VP+ + + + +VITGPNTGGKT ++KT+GL +LM++ GL+LPA +
Sbjct: 320 ------------VPVSLTLGEDFDTLVITGPNTGGKTVTLKTMGLFTLMAQCGLHLPAAD 367
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
+ + ADIGD QS+EQ+LSTFS H+ +IV I+ V SLVL+DE+G+GTDP+E
Sbjct: 368 GTEVDVTAAVYADIGDEQSIEQSLSTFSAHMRQIVAIVREVEAGSLVLLDELGAGTDPTE 427
Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
G ALA +IL YL V TTH+++L R ENAA EF ETL+PTY++L G+
Sbjct: 428 GAALAMAILDYLTGVGARTVATTHFSELKAYAYATPRVENAAVEFDSETLQPTYKLLIGT 487
Query: 509 TGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTA 568
G+SNA +A +G +I++A+ + + R S L + L +RR + A
Sbjct: 488 PGESNAFAVAGRLGLPPALIEQARGFL-----SEENRRVSRLIEGLTADRRASARERAEA 542
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
SL E +E E ++ ++AA K ++ + L A+ ++ ++ E L +
Sbjct: 543 ESLRREAEAAREAMEKERREWQQQAARQLEKAREEARAILRRARYEVRELMARVEKALAE 602
Query: 629 ASADEINSL-------IKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 681
S + +KE E + +E ++P E + G++V + S
Sbjct: 603 ESLRSQQQVLSRARQRLKELEDEVETGMERYQPVAGGQPPEHLRA------GDRVFLASW 656
Query: 682 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 741
G ++ V+ P + VLVQ G ++V V +R + N +N + + R
Sbjct: 657 G-QVGEVISPPNEQGEVLVQVGALKVNVPVKELRLVNNDHHEN---------RTKTRRNV 706
Query: 742 GSAGSSNEEASYGPRVQTSKN-----SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVI 794
AG + VQ + N +DLRG+ V EA HQ+D L A + + +I
Sbjct: 707 AGAGWT---------VQAAVNDDIRPEIDLRGLTVAEACHQVDEYLDDAVLAGLNRVSLI 757
Query: 795 HGMGTGVVKERVLEILRNHPRVAKY 819
HG GTG ++ + + LR HP V +
Sbjct: 758 HGKGTGALRVALQDYLRQHPLVKGF 782
>gi|418634564|ref|ZP_13196957.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU129]
gi|374836787|gb|EHS00364.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU129]
Length = 782
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 244/816 (29%), Positives = 395/816 (48%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSSLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ + + + +SL + ++++ Q R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
H + Y++ ++ L A K K Q+V+ A + D ++++ N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYETSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
E +KE E I + + DD + V ++ G++V V S G
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ GD++ V VQ G +++++ PI + ++ P +++R
Sbjct: 653 K-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|223043809|ref|ZP_03613852.1| MutS2 family protein [Staphylococcus capitis SK14]
gi|417907533|ref|ZP_12551304.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus capitis VCU116]
gi|222442906|gb|EEE49008.1| MutS2 family protein [Staphylococcus capitis SK14]
gi|341595562|gb|EGS38205.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus capitis VCU116]
Length = 782
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 237/808 (29%), Positives = 389/808 (48%), Gaps = 103/808 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R ++ V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLIHRANIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS L+ IR++ +R +NLD ++K
Sbjct: 123 EKMSQLPVLTDLFQEIKD--KCDTYDLYDHASYALQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL N E E IL+ LT ++A I + +ID A+A +A+ + G P
Sbjct: 236 NQISRLRNDEAVERERILTELTGQVAVEADSILIAESVMGQIDFLIAKARYARSIKGTKP 295
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+ V ++ HPLL SN+ DVE
Sbjct: 296 TFKKERTVYLPNAF------HPLL------DKETVVSNTIEFIDDVE------------- 330
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+
Sbjct: 331 ----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFE 374
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL + SL+L DE+G+GTDPSEG ALA SI
Sbjct: 375 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGAALAMSI 434
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L Y+R+ L + TTHY +L NA+ EF+++TL PTY++L G G SNA +
Sbjct: 435 LDYVRNLGSLVMATTHYPELKAYSYNREGVMNASVEFNVDTLSPTYKLLMGVPGRSNAFD 494
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+K +G II +A+ ++ + + + +SL ++++ Q L E
Sbjct: 495 ISKKLGLGLNIINKAKTMI-----GTDEQEINSMIESLERNSKRVDEQRIELDRLVREAQ 549
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
+ + + + + L + ++ Q + A + DT++++ + LRD E
Sbjct: 550 ETHDALAKQYQQYQNYEQSLMNEAKEKANQRVKSATKEADTILKELRD-LRDNKGAE--- 605
Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEV 691
+KE E I + + DD + S ++ G++V V S G K V+E+
Sbjct: 606 -VKEHE----LIDKKKQLDDQYEAKSIKQSVQKKKYDKINAGDEVKVLSYGQK-GEVLEL 659
Query: 692 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 751
G+D+ V VQ G +++++ PI + ++ P +++R
Sbjct: 660 VGEDEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPAKMVTRQNR------------ 700
Query: 752 SYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEI 809
QT K LDLRG R EEA +LD L A + +++IHG GTG +++ V +
Sbjct: 701 ------QTIKTELDLRGYRYEEALIELDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQQH 754
Query: 810 LRNHPRVAKYEQESPM--NYGCTVAYIK 835
L+ H V+K+ P +G TVA +K
Sbjct: 755 LKKHKSVSKFRGGMPSEGGFGVTVAELK 782
>gi|424834848|ref|ZP_18259539.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sporogenes PA 3679]
gi|365978409|gb|EHN14489.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sporogenes PA 3679]
Length = 788
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 241/816 (29%), Positives = 405/816 (49%), Gaps = 96/816 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A G L P ++ + L
Sbjct: 39 SVYEVREHLEETKEAFKLLVTKGAPPFE--GVYDIRSGISLAEKGSTLLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L ++ + L ++EE+I I+ + I DRA+
Sbjct: 97 RCARRFKEYINHKEEE-----ENYRALEDICEGIFSLPKIEEEIFNAIEGEDEIA-DRAT 150
Query: 133 EDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE ILS+L+++I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSVLSSKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL+ +
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPLIDRRQV--- 314
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 315 --------------------------------VPISVKLGDEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IVDI++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVDIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGSKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKA-KETQQVQ 605
EL Q+L E+ K + AR A +L E ++ E++ + L R A + A +E + +
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNAFMDARREAKNII 577
Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
+E AK + D +++D R + + ++E + +++ + +V +
Sbjct: 578 RE---AKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHKGEA 634
Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+ + +K N+
Sbjct: 635 LKNVKE-GDEVLLVSINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKDLRAAKGSNS 689
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--A 783
+G++ + + ++S+DLRGM EEA + +D L A
Sbjct: 690 ---------------NGNSSKIKKSKKLNLNLSRVESSVDLRGMDAEEAIYTVDKYLDEA 734
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ ++HG GTGV+++ ++++L+ HP V ++
Sbjct: 735 YLGGLGEVTIVHGKGTGVLRKTIMDMLKGHPHVKRH 770
>gi|116072695|ref|ZP_01469961.1| MutS 2 protein [Synechococcus sp. BL107]
gi|116064582|gb|EAU70342.1| MutS 2 protein [Synechococcus sp. BL107]
Length = 779
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 261/847 (30%), Positives = 423/847 (49%), Gaps = 92/847 (10%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQT--SAALAMMQSQPLDLSTIEDIAGILNSAVSGQ 58
MG + Q+P SL E+ + +T A L + L ++ D+ +L + G
Sbjct: 13 MGLEAARATQLPH--SLAETLQRQAETVEMAVLDDLTEGGLSFRSVNDLRPVLLRCLKGG 70
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+ S E+ AV TL A + +++ D + L++ L +LE+++ F
Sbjct: 71 VASGEELLAVAGTLAAARKLRRQI--------DDPELRPVCTALIETMVTLPDLEQRLKF 122
Query: 119 CIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
++ + + DRAS L +R + R+ + L L ++ A+ F + +I +R
Sbjct: 123 SLE-EGGRVADRASPPLAGLRQQWHGLRQERRDKLQELTRRYAS--F----LQDSVIAQR 175
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA + G + S+SG T F+EP+ + N V + EE +L
Sbjct: 176 HGRPVLAVKAGAVGQV-SGQVHDSSASGNTVFIEPRSVLTMGNKLVDIEARIRKEEQRVL 234
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ +A+ E + L++ +L +DLA AR + +W+ V P LS F +
Sbjct: 235 AELSDLVAQDEPVLNSLVEILLALDLALARGRYGRWLGAVPPNLSEDPEAPF----LLRD 290
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
++HPLL+ RS + +P+ VPI + V + RVV
Sbjct: 291 LRHPLLIWQHKRS------SGSPV----------------------VPISVDVSAQLRVV 322
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
ITGPNTGGKT S+K+LGLA+LM++AG+ LP P LPW +LADIGD QSL+Q+LST
Sbjct: 323 AITGPNTGGKTVSLKSLGLAALMARAGMLLPCSGQPSLPWCPQVLADIGDEQSLQQSLST 382
Query: 415 FSGHISRIVDILELVSR---ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
FSGHI RI IL + +LVL+DE+G+GTDPSEG ALAT++L+ L DR L + TT
Sbjct: 383 FSGHIKRIGRILHALESGPAPALVLLDEVGAGTDPSEGTALATALLKALADRARLTIATT 442
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
H+ +L LK D RFENA+ F+ ETL PTY +LWG G SNAL IA +G D ++ +A
Sbjct: 443 HFGELKALKYSDDRFENASVAFNAETLSPTYELLWGIPGRSNALAIATRLGLDAGVLDQA 502
Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
Q L+ + + + Q L +R++ ++ A AA+L A L+ E+ + +
Sbjct: 503 QALLA----PAAEGEVNTVIQGLEAQRQRQQAAAEDAAALLARTELLHEELLLRWQKQKQ 558
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA 651
+ A + + Q+++Q + + ++ ++++ +LRD AD +++ + + +
Sbjct: 559 QTALHQEQGRQRLEQSIREGQNEVRSLIR----RLRDDRAD--GETARKAGQRLRKLEDH 612
Query: 652 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
HRP + + P+ GE+V + +L K A V+ + D + V+ G MR V+
Sbjct: 613 HRPTKE---KRAPKPGWRPEVGERVRLLALA-KAAEVLAISDDGLQLTVRCGVMRSTVEL 668
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
N + + RK + + G +V+TS+N+LD+RGMRV
Sbjct: 669 NAVESLDG-------------RKAEPPPVPVVKVQARSGLGAGAQVRTSRNTLDIRGMRV 715
Query: 772 EEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP---RVAKYEQESPMNYG 828
EA ++ L + L+VIHG+GTG +K + L P RV EQ G
Sbjct: 716 HEAESTVEEQLR--NANGPLWVIHGIGTGKLKRGLRAWLDTVPYVERVVDAEQ-GDGGPG 772
Query: 829 CTVAYIK 835
C+V +++
Sbjct: 773 CSVVWVR 779
>gi|57866654|ref|YP_188310.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis RP62A]
gi|242242444|ref|ZP_04796889.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
W23144]
gi|418612985|ref|ZP_13176006.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU117]
gi|418626824|ref|ZP_13189420.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU126]
gi|420175070|ref|ZP_14681515.1| MutS2 family protein [Staphylococcus epidermidis NIHLM061]
gi|420234319|ref|ZP_14738884.1| MutS2 family protein [Staphylococcus epidermidis NIH051475]
gi|81674957|sp|Q5HQ30.1|MUTS2_STAEQ RecName: Full=MutS2 protein
gi|57637312|gb|AAW54100.1| MutS2 family protein [Staphylococcus epidermidis RP62A]
gi|242234094|gb|EES36406.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
W23144]
gi|374817295|gb|EHR81480.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU117]
gi|374831368|gb|EHR95110.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU126]
gi|394244356|gb|EJD89701.1| MutS2 family protein [Staphylococcus epidermidis NIHLM061]
gi|394304373|gb|EJE47778.1| MutS2 family protein [Staphylococcus epidermidis NIH051475]
Length = 782
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 244/816 (29%), Positives = 395/816 (48%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINETCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ + + + +SL + ++++ Q R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
H + Y++ ++ L A K K Q+V+ A + D ++++ N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYETSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
E +KE E I + + DD + V ++ G++V V S G
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ GD++ V VQ G +++++ PI + ++ P +++R
Sbjct: 653 K-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|417643505|ref|ZP_12293552.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus warneri VCU121]
gi|330685726|gb|EGG97362.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU121]
Length = 782
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 242/811 (29%), Positives = 403/811 (49%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + +A ++ + G +L+ +E+ A++R ++ V N +K L+ D +Y L
Sbjct: 65 LSGLTKVAQYIHRSTIGGVLNVTELNAIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ LT+L + I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 SQMAQLPILTDLFKDINDKCDAHDL--YDHASYELQSIRSKISSTNQRIRQNLDRVVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A + + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANR----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT+++A E + L + ++ +D A+A +A+ + G
Sbjct: 236 NQISRLHNDEAVERERILTELTSQVA-VESDALLLAESIMGHLDFLIAKARYARAIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P ++ V ++ HPLL + +N+ D+E
Sbjct: 295 PTFHNERTVYLPNAY------HPLL------DHNTVVANTIEFVDDIE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++G+ +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R+ L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDHVRNLGALVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S S + E+R +L+ + A + H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQTTHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E+ Y++ ++ K L A K K Q+V+ A + D ++++ +LRD +
Sbjct: 554 ELEKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADAILKELR-ELRDKKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + DD + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQNVQKQKYDKIQAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ GD++ V VQ G +++++ PI + +++K++E +S
Sbjct: 657 LELVGDEEAV-VQMGILKMKL------PIED---------LEKMKKKKE--------TST 692
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
+ + R QT K LDLRG R E+A +LD L A + +++IHG GTG +++ V
Sbjct: 693 KMVTRANR-QTVKTELDLRGYRYEDALIELDQYLDQAVLSNFEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V + P +G TVA +K
Sbjct: 752 QQHLKRHKSVKTFRGGMPSEGGFGVTVASLK 782
>gi|255526069|ref|ZP_05392992.1| MutS2 family protein [Clostridium carboxidivorans P7]
gi|296187117|ref|ZP_06855515.1| recombination and DNA strand exchange inhibitor protein
[Clostridium carboxidivorans P7]
gi|255510255|gb|EET86572.1| MutS2 family protein [Clostridium carboxidivorans P7]
gi|296048311|gb|EFG87747.1| recombination and DNA strand exchange inhibitor protein
[Clostridium carboxidivorans P7]
Length = 787
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 246/806 (30%), Positives = 395/806 (49%), Gaps = 100/806 (12%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDG-DSLQRYSPLLEL 102
+ D+ ++ A G L P ++ + LRA + ++ E +G L+ S +
Sbjct: 68 VYDVREGISRAGKGSTLMPGQLLKIAAILRAARRFQEYISHKEEEEGFRVLENISQGIIP 127
Query: 103 LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR-AERKRN---MENLDSLLKKVAA 158
LKN +E+ I I+ + + DRAS L IR A + +N + ++SL++ +
Sbjct: 128 LKN------IEDHIFMSIESEEQVS-DRASTALYNIRKALKDKNSSVRDRVNSLIRTYSD 180
Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ L T R R + ++A HK +P G+ + SSSGAT ++EP G V NN
Sbjct: 181 YL------QDNLYTMRGDRYVLPVRAEHKGAVP-GLVHDQSSSGATLYIEPMGLVNLNNE 233
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L E AE IL+ L+ EI S ++ D + E+D FA+A FA ++ P
Sbjct: 234 IKELMLKEKAEVDRILAYLSNEIYGSIIAVRNDADIIWELDFIFAKAKFASELNCTAP-- 291
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
V+ + I+I KHPL+ +
Sbjct: 292 ----KVNDEGIIDIVQGKHPLIDRKVV--------------------------------- 314
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VP+D+ + +VITGPNTGGKT ++KT+GL +M+ +GL +PA+ + + +F +
Sbjct: 315 --VPLDVYLGKGFTSLVITGPNTGGKTVTLKTVGLLHIMALSGLMIPARENSTVSFFKEV 372
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQ+LSTFS H++ IV+I+ ESLVL DE+G+GTDP+EG ALA SIL+
Sbjct: 373 FADIGDEQSIEQSLSTFSSHMTNIVNIINKADDESLVLFDELGAGTDPTEGAALAVSILE 432
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
L+ R V TTHY++L K ENA+ EF +ETLRPTYR+L G G SNA I+
Sbjct: 433 NLKSRGCRIVATTHYSELKVYALKVNGVENASVEFDVETLRPTYRLLIGIPGKSNAFEIS 492
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH---AEI 575
+ +G II A+ E + E Q +L + L E+ K E+ AR A L A+I
Sbjct: 493 RRLGLADYIIHDAK---ENINSETLQF--EDLIEDLQEKSVKAEANAREAEMLKLEAAKI 547
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
D Y E ++ +A +E +++ +E AK + D ++++ + A ++
Sbjct: 548 KDKYEEKMGSLQNAREKAVINAQREAKRIIKE---AKEEADNILKEMRELEKAGYASDVR 604
Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPG 693
++E +A ++ + D+ + + + GE+V V SL K+ V+ P
Sbjct: 605 HKLEEERRKLAQKLD--KIDEKVNKVKRDDGEELKNVREGEEVFVPSLNQKV-IVISKPD 661
Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 753
+ V VQ G M++ VK ++R + A N + R ++E + +
Sbjct: 662 NKGNVQVQAGIMKIEVKLKDLRAVT-----GAVNKEEKKRVKREAKLN------------ 704
Query: 754 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 811
+++ +S+DLRGM EA + D L A + +IHG GTGV++ + ++L+
Sbjct: 705 ---LKSVASSVDLRGMDSLEAVYTADKYLDEAYLAGLKEVTLIHGKGTGVLRNTITDMLK 761
Query: 812 NHPRVAKYE--QESPMNYGCTVAYIK 835
+H V KY + G TVA ++
Sbjct: 762 HHSHVKKYRLGEYGEGGTGVTVAELR 787
>gi|302854502|ref|XP_002958758.1| hypothetical protein VOLCADRAFT_121755 [Volvox carteri f.
nagariensis]
gi|300255866|gb|EFJ40148.1| hypothetical protein VOLCADRAFT_121755 [Volvox carteri f.
nagariensis]
Length = 1442
Score = 288 bits (737), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 252/774 (32%), Positives = 366/774 (47%), Gaps = 126/774 (16%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI-- 65
+ Q+P G+S EES+ LL QT+ AL +++ DI + +A +G L+ ++
Sbjct: 421 RGQLPRGRSREESELLLQQTAEAL----EANIEVRDCFDIRPAVEAAAAGVCLNAKQLES 476
Query: 66 -CAVRRTLRAVNNVWKKLTEAAELDGDSLQ-----------RYSPLLELLKNCNFLTELE 113
C + +L +V + A+ L+ RY L L + E E
Sbjct: 477 LCTI--SLFLYLHVGRMQGVASTLESAFAVKAAATAPPHRYRYPSLAALAEG----IEEE 530
Query: 114 EK-----IGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
E+ I CI K + D ASE L +RAER+ N E L ++ A + Q G +
Sbjct: 531 ERTLLRAIRACI--KFGSVCDDASESLAAVRAERQSNKERLRKEVEGWARSMQQRGAAEA 588
Query: 169 PLITKRRSRMCVGIKASHKYLLPDG-IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
+ R R CVG+++ + LP G + L+ SSSGAT +MEP+ V+ NNME L E
Sbjct: 589 GAVAIVRGRFCVGVRSGRQGELPRGSVRLSSSSSGATVYMEPQPCVDLNNMEAVLGEREE 648
Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
E +L LL+ + ++ L+ V +DL ARA ++WM P +
Sbjct: 649 QEVQKVLGLLSKMLGTRVPQLLSLLGSVTSLDLVAARARHSRWMGATRPEF--EEFGPGA 706
Query: 288 SSINIEGIKHPLLLGSSLRSLSAASS-NSNPLKSDVE----------------------- 323
S +++ G HPLL+ L L A S + N D +
Sbjct: 707 SPLHVPGALHPLLMQRGLPPLPQAPSVDDNRFDRDFQAAPAWELRRVVVPDGPRSGELPE 766
Query: 324 ---NSEMTVG---SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
+ +T G ++S S P P+D++V VV ITG GKT ++K GL LM
Sbjct: 767 YGSTTAVTDGGSATVSGSSSLLPRPLDLRVPPGKAVVAITG----GKTVTLKAAGLMVLM 822
Query: 378 SKAGLYLP--------AKNH----------------PRLPWFDLILADIGDHQSLEQNLS 413
++AGL+LP H PRL WFD +LADIGD QSL+QNLS
Sbjct: 823 AQAGLFLPYTAASGISTATHGSPPCPRATTSGLTPRPRLVWFDRVLADIGDAQSLQQNLS 882
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFSGHI RI IL SLVL+DE+GSGTDP EG ALA ++L L + L + TTH+
Sbjct: 883 TFSGHIRRIRGILATAGPGSLVLLDEVGSGTDPLEGAALARAVLDRLAGQARLTLATTHH 942
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK---IIQR 530
A+L ++D R+ N + F +LRPTYR+ WG+ G SNAL+IA+++GFDR+ I
Sbjct: 943 AELKRAAEEDGRYVNVSMAFDTASLRPTYRLCWGAAGASNALDIAEALGFDRQDSHIAVV 1002
Query: 531 AQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
A+ LV +L RQ+ +E +R L + A S E + RE+E + K
Sbjct: 1003 ARSLVRQLDETRQE----------LEAQRALRQRLEAAQSRLQETVSAVREMERQLK--- 1049
Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADE----INSLIKESESAI 645
L +E + E + ++ T + F L+ AS +E I +LI E +A
Sbjct: 1050 -----LSPRE---IVMERDTLAAEVQTALDAFAAGLQPQASVEEALSRIEALIPEEVAAY 1101
Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGD-KLATVVEVPGDDDTV 698
+ + D + ++ P G+ VHVK GD A VV V GD TV
Sbjct: 1102 RG--QGYSGGGDEEDMYDDRATLRP--GDPVHVKPYGDMGSAKVVSVKGDYVTV 1151
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 755 PRVQTSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEIL--RN 812
P VQT +N+LD+ G E A+ +D + + SV FV HGMGTG V++ V +L R
Sbjct: 1359 PPVQTEENTLDVVGEVPELAAADVDDHIRSAPAGSVFFVRHGMGTGAVRDAVQSLLAKRQ 1418
Query: 813 HP--RVAKYEQESPMNYG-CTVAYI 834
P RV ++ +E+P + G TV ++
Sbjct: 1419 VPKGRVQEW-REAPDSRGEVTVVWL 1442
>gi|134299495|ref|YP_001112991.1| MutS2 family protein [Desulfotomaculum reducens MI-1]
gi|134052195|gb|ABO50166.1| DNA mismatch repair protein, MutS family [Desulfotomaculum reducens
MI-1]
Length = 782
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 244/823 (29%), Positives = 393/823 (47%), Gaps = 115/823 (13%)
Query: 16 SLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
++E+ ++ +TS +++ PL +L+ DI L A +LS E+ AV TL A
Sbjct: 38 NMEDIKRWQAETSEGRELLRLDPLAELAGWHDIRQALTRASRYAVLSAEELFAVGETLAA 97
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ K +E + RY L EL ++ +LE+ I + I D + E
Sbjct: 98 SRQIKKFFSEKTD-------RYPLLSELAESLTNQAQLEKNILQAVLPGGEIADDASPEL 150
Query: 135 LELIRA-ERKRNM--ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
L++ R +R +N E ++++++ Q + + P+IT R R V +K ++ +P
Sbjct: 151 LQIRRGIQRSQNRIRERMENIIRSSDNQKY----LQDPIITIRNDRYVVPVKQEYRNQIP 206
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + S+SGAT F+EP VE NN +L +E E IL L+ E++ +I
Sbjct: 207 -GIVHDQSASGATLFVEPMAVVEANNEVRQLVAAEKQEIQRILGQLSQEVSGVHEDISIA 265
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCP-ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + ++D A+A ++ ++ P IL+ I+I+ +HPLL G +
Sbjct: 266 LETLGDLDFIMAKARYSLKLNAWSPKILAG-------PMIDIKKGRHPLLPGDA------ 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
VP I + + +VITGPNTGGKT ++KT
Sbjct: 313 ------------------------------VPATISLGKAFKTLVITGPNTGGKTVTLKT 342
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL SLM++AGL++PA+ + F + ADIGD QS+EQ+LSTFS H++ +V IL+
Sbjct: 343 VGLFSLMTQAGLHIPAEAGTEMGVFKQVFADIGDEQSIEQSLSTFSSHMTNLVRILDRAG 402
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL+DE+G+GTDP+EG ALA +IL+ L R + TTHY++L ENA+
Sbjct: 403 EGSLVLMDELGAGTDPTEGAALARAILEELHQRGACTLATTHYSELKNYAYATPGVENAS 462
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETLRPTYR+L G G SNA I+ +G R+II+ A+ + +Q +EL
Sbjct: 463 VEFDVETLRPTYRLLIGRPGRSNAFEISARLGLRREIIESARGFL-----TTEQVEVAEL 517
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
L + ++ E + AA L E L +DL + + K ++ + +
Sbjct: 518 ISRLEKTQQAAEKDRQEAALLRRESEQLKERYHALEQDLRAKKEAILVKAHEEASRMVRQ 577
Query: 611 AKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
A+++ + V++ ++L + SA K E AI H + + ++ TP
Sbjct: 578 ARLEAEDTVKELRSRLAEESA-------KNREQAI------HHARNKLQQVTSKVAAKTP 624
Query: 671 QF------------GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
+ GE+V + K A VV V G++ V VQ G M++ V +R +
Sbjct: 625 KRTADGEIPRQVKPGEEVFLPKYNQK-AYVVGVSGNN--VQVQVGIMKMSVPMQELRTVK 681
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
K ++G S + Q SLDLRGM +EA ++
Sbjct: 682 EVKV--------------------TSGQSKVGQVLMDKAQHIGTSLDLRGMTADEAMLEI 721
Query: 779 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ L A S + ++HG GTG ++ V L+NHPRV +
Sbjct: 722 EKYLDDAFLAGLSSVTLVHGKGTGALRTSVQRELKNHPRVKTF 764
>gi|374992901|ref|YP_004968400.1| MutS2 family protein [Desulfosporosinus orientis DSM 765]
gi|357211267|gb|AET65885.1| MutS2 family protein [Desulfosporosinus orientis DSM 765]
Length = 787
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 237/826 (28%), Positives = 389/826 (47%), Gaps = 101/826 (12%)
Query: 24 LNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +T A +M+ PL + ++I L + G ++ E+ +R TLR + L
Sbjct: 49 LQKTEEAKNLMRGNPLFSVRGAKEIRAYLERCLRGGVVHGEELLEIRDTLRVGRKTKQYL 108
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRA 140
E E YS L +++ LE++I CI D + D AS +L +R
Sbjct: 109 QEFRE-------SYSGLWDIVLPIESQKSLEDEISRCISEDGN---VADNASPELAELRR 158
Query: 141 E----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ R E+L+ L+ Q + P+IT+R R + IK ++ P GI
Sbjct: 159 SINRLQNRIRESLEGTLRNPVYQKM----LQDPIITQRSDRYVIPIKQEYRGSFP-GIVH 213
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP V+ N + E E IL +L+A+I EI L + +
Sbjct: 214 DQSASGATLFIEPMPVVQLGNELREVILKEHREVQRILQMLSAQIEGRADEIADLHEALA 273
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++DL A+A + M+ P L + + + +HPL
Sbjct: 274 QLDLVIAKAHLSLDMNAGSPELVTGQQLKLVQA------RHPL----------------- 310
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
IS VP+ +++ + +VITGPNTGGKT ++K +GL +
Sbjct: 311 -------------------ISGRVVPLSVELGIDFDTLVITGPNTGGKTVALKAVGLMAA 351
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++ GL +PA++ ++ F + ADIGD QS+EQ+LSTFSGH+ IVDI+ SLVL
Sbjct: 352 MNQCGLQIPAESESKMGVFTQLFADIGDEQSVEQSLSTFSGHMKNIVDIINRADERSLVL 411
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP+EG ALA IL L +R + TTHY L + R +NA+ EF E
Sbjct: 412 LDEVGAGTDPTEGAALAMGILAELHERGCRTISTTHYGALKTFAYETPRVKNASVEFDTE 471
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTYR+L G G SNA IA +G ++ +A V ER+ ++L ++L E
Sbjct: 472 TLRPTYRLLIGIPGKSNAFTIAGRLGLSEGVLAKANTFV----TEREMQ-VADLIENLGE 526
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
RR++E + A + + + +E+++ LD L A + + + AK + +
Sbjct: 527 TRREIEIEKLKAETGRQAVEKQSKALEEKSNRLDEEVEILLALARDEASELVREAKREAE 586
Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ--FGE 674
++++ ++ L+ + + + I+++ I + + D + T Q G+
Sbjct: 587 ALIEELKSALKKENKQQQD--IEKARQGFRKI--SAKLDQGRQIKRTGGELTADQIMLGQ 642
Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 734
V++ + K VV++P + V VQ G M+V V P L+
Sbjct: 643 TVYMTKVKQK-GQVVKLPNANGEVQVQAGIMKVMV------------------PLTELKL 683
Query: 735 QQEDRQSGSAGSSNEEASYGPR-VQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVL 791
QE+++ +A E G R + ++ +DLRGM V E + LD + A ++
Sbjct: 684 AQEEKK--AAPKRAREMGMGFRKAEEIRSEIDLRGMLVTEGTEALDKYMDDAVLGGIGMI 741
Query: 792 FVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+VIHG GTG ++ + + L+ HP V + + + G TV +K
Sbjct: 742 YVIHGKGTGAMRAGIHDFLKGHPHVRSFRLGEYGEGDSGVTVVDLK 787
>gi|435854741|ref|YP_007316060.1| MutS2 family protein [Halobacteroides halobius DSM 5150]
gi|433671152|gb|AGB41967.1| MutS2 family protein [Halobacteroides halobius DSM 5150]
Length = 788
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 247/834 (29%), Positives = 398/834 (47%), Gaps = 107/834 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+E Q+ + + + L+ + P I DI L G +L E+ + T+ +
Sbjct: 43 IESRQQEVTEATKILSRESAPPF--GGIYDIRSALKKVEKGAILGADELLDILITITS-- 98
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL- 135
KKL D Y +L++ + LE+KI +D + I D AS L
Sbjct: 99 --GKKLRSYFLGLEDEDNEYVRILKISSQIETFSNLEQKIRKAVDNQGQI-KDSASSKLA 155
Query: 136 ---ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
IR R L+S+L Q + I + ++T R R + +KA+ + P
Sbjct: 156 DLRRKIRNTSDRIKNKLNSILNSNRYQSY----IQESVVTIRDQRYVIPVKAAKQSDFP- 210
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S+SG T F+EP VE NN +L + E E IL L+ E+ K + IK +
Sbjct: 211 GIIHDKSASGQTVFIEPMPVVEINNKLQQLRSEEEEEIKRILQELSIEVEKRLQPIKETI 270
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ +D FA+A ++ ++ PIL+S+ IN+ +HPLL
Sbjct: 271 KVLAVLDFIFAKAKYSIELEASEPILNSKGQ------INLIKARHPLLT----------- 313
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
DV VPID+++ +VITGPNTGGKT S+KT+G
Sbjct: 314 -------EDV------------------VPIDVQLGDNFASLVITGPNTGGKTVSLKTIG 348
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L ++M +AGL++PA + +L F+ + ADIGD QS+EQNLSTFS H+++I+ I+E S
Sbjct: 349 LLTIMGQAGLHVPALSGSKLAIFNQVYADIGDEQSIEQNLSTFSSHMTQIIKIVERASIN 408
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP EG ALA IL YL + V TTHY++L ENA+ E
Sbjct: 409 SLVLLDELGAGTDPVEGSALARGILDYLHQQGAKTVATTHYSELKTYAYNQDGVENASVE 468
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F +ETL PTY + G G SNA IA +G +II +A + +++ E + +
Sbjct: 469 FDVETLAPTYNLQMGLPGRSNAFQIASRLGLSDEIIDKASQFLDQEDIEL-----DNIIK 523
Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN--- 609
+ E++R+ + + +A + +L E E + K L+ + K +E ++ +E N
Sbjct: 524 QIEEDKREYQQKKESAQENKRQARELREEYEAKLKKLEAQ----KEREMKEAYREANKII 579
Query: 610 -FAKVQIDTVVQDF--ENQLRDASADEINSLIKESESAIA----AIVEAHRPDDDFSVSE 662
A+ + + ++ + + QL D + S ++E + ++EA R +
Sbjct: 580 KRAQQKANKIIDELKEQRQLNDRKIEGARSELREERKDLKEERQELIEAKREQKEVP--- 636
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ G++V + +L K V+E+ + LVQ G M+V V ++R + +
Sbjct: 637 ------DIKVGDKVKLSNLNQK-GKVLEIHSGKEEALVQAGIMKVTV---DLRELEKTTI 686
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
++ N R+ + S SN+ + P LDLRG+RV EA ++LD L
Sbjct: 687 ESKTNNNTRV--------NISQVKSNKAKNISP-------ELDLRGLRVVEAKNKLDKYL 731
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
A + + + +IHG GTG ++E V E+L+N+ + Y P G V +
Sbjct: 732 DDALLANLNQVEIIHGKGTGTLREVVDEMLKNYRNIKDYRLGRPKEGGTGVTIV 785
>gi|242373376|ref|ZP_04818950.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
M23864:W1]
gi|242348739|gb|EES40341.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
M23864:W1]
Length = 782
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 245/811 (30%), Positives = 400/811 (49%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R ++ V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLIHRANIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + L++L ++I C + D AS L+ IR++ +R +NLD ++K
Sbjct: 123 EKMNQLPVLSDLFQEIK--DKCDTYDLFDHASYALQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++A +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGQVA-AEADALLIAESVMGQIDFLTAKARYARSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + V ++ HPLL N E V + +
Sbjct: 295 PTFKKERTVYLPNAF------HPLL-----------------------NKETVVANTIEF 325
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I D ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 326 IDD----------VET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLVPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R+ L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRNLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S S + E+R +L+ R A H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINSMIESLERNSKRVDEQRIELDRLVREAQETHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
+ Y++ ++ K L A K K Q+V+ A + D+++++ + LRD E
Sbjct: 554 ALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADSILKELRD-LRDNKGVE 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + D+ + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKQLDEQYEEKSIKQNVQKKKYDKINAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ G+D+ V VQ G +++++ PI + ++ P +++R
Sbjct: 657 LELVGEDEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R EEA +LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEEALTELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V+ + P +G TVA +K
Sbjct: 752 QQHLKKHKSVSNFRGGMPSEGGFGVTVAELK 782
>gi|383761505|ref|YP_005440487.1| MutS2 protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
gi|381381773|dbj|BAL98589.1| MutS2 protein [Caldilinea aerophila DSM 14535 = NBRC 104270]
Length = 811
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 251/857 (29%), Positives = 403/857 (47%), Gaps = 135/857 (15%)
Query: 21 QKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q+ L QT A ++ Q + + D+ +L+ A G +L P ++ ++ TL+ +
Sbjct: 44 QEWLAQTREAYQLLGQKDDISFGGVSDLRPLLDRAERGAILLPPDLLEIKFTLQRARQLR 103
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
LT + L E+ + L E+I CI+ + ++D AS +L IR
Sbjct: 104 TLLTRIE-------SSFPHLAEMAADIEPCDHLVEQISHCINDRG-DVMDSASPELARIR 155
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
+E + E L S L ++ + + L+T+R+ R + I+A +K + +GI + S
Sbjct: 156 SELRIAQERLLSTLDRIIHSADIRPYLQEALVTQRQGRYVIPIRAEYKGNI-EGIIHDQS 214
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
+SGAT F+EP V+ NN L E E IL L+ +A+ ++ + + +D
Sbjct: 215 ASGATLFIEPLKVVQQNNAVRELELQEEKEVRRILLELSTAVAEEAVYLRRNVQALARLD 274
Query: 260 LAFARAGFAQWMDGVCPIL--------------SSQSHVSFDSSINIEGIKHPLLLGSSL 305
FA+A +A +D P + + ++ S I++ +HPLL
Sbjct: 275 FTFAKARYAYALDATVPEMLPFQPRRSKQKRDETEEAAAHPGSIIDLRRARHPLL----- 329
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+P TV VPID+ ++ +T ++VITGPNTGGKT
Sbjct: 330 ----------DP---------QTV-----------VPIDVYLDDDTYIIVITGPNTGGKT 359
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +LM+++GL +PA RL F+ I ADIGD QS+EQNLSTFS H++ I+ I
Sbjct: 360 VTLKTVGLLTLMAQSGLMIPADVGSRLSVFEGIYADIGDEQSIEQNLSTFSSHMTNIIAI 419
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
LE SLVL+DE+G+GTDP EG ALA ++L+ LRDR TTHY+DL
Sbjct: 420 LEEADPHSLVLLDELGAGTDPEEGSALAIALLENLRDRGITTFATTHYSDLKLYAHNTPG 479
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
NA+ EF +ETL PTY + G G SNAL IA+ +G + I+++A+ +V RP+ Q
Sbjct: 480 VRNASVEFDVETLSPTYELSIGLPGRSNALTIARRLGLNPVIVEKAESIV---RPDTLQA 536
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
K L+++ R+ +A AA + AK +R+A L+A Q+
Sbjct: 537 DK------LLDDIRRARQEALEAA--------------ERAKARERQAQLLEADLRYQLA 576
Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH-----RPDDDF-- 658
Q + A+ + + +A+ EI L +++ S + AH R + +
Sbjct: 577 Q-IEQARRSVIAETRALMQAELEAARKEIEQLRRQARSGFSTGTTAHEEFLARAEKELAR 635
Query: 659 ---SVSETNTSSFTPQFGEQVHVKSL--GDKL--------ATVVEVPGDDDTVLVQYGKM 705
+ E N P E+ + S+ GD + V+ + + VQ G
Sbjct: 636 RSQATEEVNRRVVVPGSAEERLIGSIEVGDTVWVPSLQASGEVLAIHSASNEADVQLGNF 695
Query: 706 RVRVKKNNIRPIPNSKRKNAANPAPRLR-KQQEDRQSGSAGSSNEEASYGPRVQTSKNS- 763
R+++ P RL +Q+ +++ ++G + RV+ +S
Sbjct: 696 RLKL------------------PMKRLELRQKAVKETAASGVTI-------RVEVPTSSP 730
Query: 764 ---LDLRGMRVEEASHQLDIAL-ACWESR-SVLFVIHGMGTGVVKERVLEILRNHPRVAK 818
LDLRG RVEE +L+ L + +R + +IHG GTG +K V E L++HP V
Sbjct: 731 GIELDLRGERVEEGLERLERYLDEAYRARLPFVRIIHGHGTGAMKSAVREALKHHPLVGS 790
Query: 819 YEQESPMNYGCTVAYIK 835
P G V +K
Sbjct: 791 MRAGDPGEGGDGVTMVK 807
>gi|399046291|ref|ZP_10738749.1| MutS2 family protein [Brevibacillus sp. CF112]
gi|433543508|ref|ZP_20499913.1| DNA mismatch repair protein [Brevibacillus agri BAB-2500]
gi|398055652|gb|EJL47713.1| MutS2 family protein [Brevibacillus sp. CF112]
gi|432185182|gb|ELK42678.1| DNA mismatch repair protein [Brevibacillus agri BAB-2500]
Length = 785
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 255/848 (30%), Positives = 403/848 (47%), Gaps = 131/848 (15%)
Query: 5 VVQKAQIPFGKS----------LEE---SQKLLNQTSAALAMMQSQPLDLSTIEDIAGIL 51
+V KA +GK L+E +Q+ + + L + S PL I DI G +
Sbjct: 18 LVDKASCTYGKEKAAELTPFVRLDEVKIAQQGTEEAATVLRLKGSAPL--GGIRDIRGSV 75
Query: 52 NSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLT 110
A +L+P E+ + T+ A + L + E PL+ + + L
Sbjct: 76 QRARLNAMLAPMELLDIASTVMAGRRLKTFLLDMCE------DHEMPLIKQQAERIEGLR 129
Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGI 166
ELE +I CID ++D AS +L +R E + R E LD + + + Q +
Sbjct: 130 ELEMEIRRCIDENG-DVMDSASMELRQVRQEIRQVESRIREKLDQMTRSSSYQKM----L 184
Query: 167 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 226
+ ++T R R + +K ++++ GI + S+SGAT F+EP+ V NN L E
Sbjct: 185 MENIVTIRGDRFVIPVKQEYRHVF-GGIVHDQSASGATLFIEPEVIVSMNNKLRELRLRE 243
Query: 227 IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
E IL LLT ++A + + +D + E+D FA+A A M VCP L+ + +
Sbjct: 244 EREVERILYLLTEQVAFAVDALVENVDALTELDFMFAKAQLAWSMKAVCPKLNDRGY--- 300
Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
+N++ +HPL+ P + VP+D++
Sbjct: 301 ---LNMKKARHPLI----------------P-------------------REVVVPVDVE 322
Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
+ E + +V+TGPNTGGKT S+KT+GL SLM+ AGL++PA+ + F + ADIGD Q
Sbjct: 323 LGGEYQAIVVTGPNTGGKTVSLKTIGLLSLMAMAGLHIPAEEESEMTVFSSVFADIGDEQ 382
Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
S+EQ+LSTFS H+ I+ ILE + +SLVL DE+G+GTDP+EG ALA SI+ ++ D
Sbjct: 383 SIEQSLSTFSSHMKNIISILEKMDAKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGAR 442
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
V TTHY++L NA+ EF ++TLRPTYR+L G G SNA IA+ +G
Sbjct: 443 LVATTHYSELKAYAYDRPEVINASVEFDVQTLRPTYRLLVGVPGRSNAFAIARRLGLPEA 502
Query: 527 IIQRAQ-------KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM--- 576
II+ A+ VE + +++RKS L + E++
Sbjct: 503 IIEVARGSISEEDNQVESMIASLERNRKSAEADRLAAAAARKEAEELRRQLEEERARFAE 562
Query: 577 ---DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
L EDEA R A L +E + + +EL + D V+ E++L DA
Sbjct: 563 EKNKLMERAEDEA----RIAVQLAKEEAETIIRELREMR---DEGVEIKEHRLIDAKKRL 615
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
N++++ + + +A R + + G++V V S G K TV+E
Sbjct: 616 GNAVLELEKEKVKKPAKAVR-------------ATQIKVGDEVMVTSFGQK-GTVLE-KV 660
Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 753
++D LVQ G M+++V++ ++ + +K A P +++
Sbjct: 661 NNDEFLVQIGIMKMKVRREDMNVQNSITQKPQAAPYTSVKR------------------- 701
Query: 754 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 811
R + K LDLRG VE+A ++D L A + +IHG GTGV+++ V E LR
Sbjct: 702 --RTASIKMDLDLRGYNVEDAIREMDQFLDDALLAGLHSVSIIHGHGTGVLRKGVHEYLR 759
Query: 812 NHPRVAKY 819
+H V +
Sbjct: 760 SHRNVKSF 767
>gi|365135255|ref|ZP_09343723.1| MutS2 family protein [Subdoligranulum sp. 4_3_54A2FAA]
gi|363612692|gb|EHL64223.1| MutS2 family protein [Subdoligranulum sp. 4_3_54A2FAA]
Length = 795
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 249/839 (29%), Positives = 404/839 (48%), Gaps = 127/839 (15%)
Query: 12 PFGKSLEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
P ++ +E + L QT A ++ ++ S++E++ GI+ A G +LS +E+ V
Sbjct: 35 PAWETPDEVRAALEQTDAMTTLLIKNGSPRFSSVENVRGIVQRAEKGGVLSMAELLTVAD 94
Query: 71 TLRAVNNV--WKKLTEAAELDGDSL---QRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
TLR + W LTE L D L P LE + L+E E
Sbjct: 95 TLRNFRELVKWYGLTEHDVLPVDDLFYAMTPQPTLEKTIKDSILSENE------------ 142
Query: 126 IILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
+ D AS+ L IR A + LD++ K +A + + +++ R R V
Sbjct: 143 -MADTASDTLYDIRRKIHAAENSIRDKLDAITKSQSASRY----LQDAVVSLRNGRFVVP 197
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KA H+ + G+ +VSSSG+T F+EP VE N ++L N E AE IL+ +A+
Sbjct: 198 VKAEHRGEV-GGVIHDVSSSGSTLFVEPTAVVEANAKILQLRNLEQAEIERILAAFSAQT 256
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A E + + +LE+D+ A+A A + P V+ D + ++ +HPL+
Sbjct: 257 AALEPMFTFGYEAMLELDVLLAKARLALDQKAMKP------QVNDDHAFSLVRARHPLID 310
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
+ + VP+DI + +VITGPNT
Sbjct: 311 PAVV-----------------------------------VPVDIALGGAYDTLVITGPNT 335
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT GL M++ G +PA + F IL DIGD QS+EQ+LSTFSGHI
Sbjct: 336 GGKTVTLKTAGLLCAMAQHGYLIPAHESSSVCVFGEILVDIGDEQSIEQSLSTFSGHIKN 395
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
I IL+L ++LVL+DE+G+GTDP+EG ALA S+++ LR + TTHY++L
Sbjct: 396 ITGILKLAGPQTLVLMDELGAGTDPAEGAALAVSVIEALRGLGAKIMATTHYSELKIFAL 455
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+NA+ EF++ETLRPTYR+ G G SNA I++ +G +II+ A+ E L E
Sbjct: 456 DTPGVQNASCEFNVETLRPTYRLSVGVPGKSNAFLISQKLGLAPEIIENAR---EHLSNE 512
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL----- 596
QQ + L + + +L++Q +DE + L A+H
Sbjct: 513 DQQF--DNILNQLEDLKVELKAQ------------------QDEVERLKHTASHALEQAE 552
Query: 597 --KAKETQQVQQELNFAKVQIDTVVQDFEN-------QLRDASAD-EINSLIKESESAIA 646
+A +Q ++EL A+ + +VQD +N +LR D ++N+ + + +
Sbjct: 553 EKRAALIRQGEEELAAAREKAHGMVQDVQNTAYGLMDELRKLEKDKQLNASQRAARAREI 612
Query: 647 AIVEAHRPDDDFSVSETNTSSFTP----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
A E + V +F P + G++V + L DK V +P D V V+
Sbjct: 613 AKKETEKLFGKTDVVHAPQRTFKPLDSVKLGQEVLIAEL-DKPGIVTALPDRDGMVEVRA 671
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G ++ +V N + P+ ++ PAP +K+ + R++ ++ S ++ + P ++
Sbjct: 672 GIIKTKVPLNGL-CAPHKQQ-----PAP--QKKYQPRRAPASASGGDKVTRTPSME---- 719
Query: 763 SLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
++L GM VEEA H+ D I ++ L++IHG GTG +++ + E LR H V +
Sbjct: 720 -INLIGMTVEEALHEADKFIDNGVMNGQTTLYLIHGKGTGALRKGIHEHLRRHKNVRSF 777
>gi|420189663|ref|ZP_14695631.1| MutS2 family protein [Staphylococcus epidermidis NIHLM037]
gi|420204084|ref|ZP_14709644.1| MutS2 family protein [Staphylococcus epidermidis NIHLM015]
gi|394260998|gb|EJE05800.1| MutS2 family protein [Staphylococcus epidermidis NIHLM037]
gi|394274098|gb|EJE18523.1| MutS2 family protein [Staphylococcus epidermidis NIHLM015]
Length = 782
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 244/816 (29%), Positives = 395/816 (48%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ + + + +SL + ++++ Q R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
H + Y++ ++ L A K K Q+V+ A + D ++++ N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYETSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
E +KE E I + + DD + V ++ G++V V S G
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ GD++ V VQ G +++++ PI + ++ P +++R
Sbjct: 653 K-GEVLELVGDEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|168181815|ref|ZP_02616479.1| MutS2 family protein [Clostridium botulinum Bf]
gi|237796578|ref|YP_002864130.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum Ba4 str. 657]
gi|259511153|sp|C3KTI4.1|MUTS2_CLOB6 RecName: Full=MutS2 protein
gi|182674997|gb|EDT86958.1| MutS2 family protein [Clostridium botulinum Bf]
gi|229262891|gb|ACQ53924.1| MutS2 family protein [Clostridium botulinum Ba4 str. 657]
Length = 788
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 243/831 (29%), Positives = 411/831 (49%), Gaps = 92/831 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI + A G L P ++ + L
Sbjct: 39 SVYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRNGIYLAEKGSALLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + + + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFREYINHK-----EQEESYRVLENICEGIFSLPKIEEEIFNAIEGEDEI-ADRAS 150
Query: 133 EDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K + ++SL++ ++ + + + T RR R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRRDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGAKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
EL Q+L E+ K + AR A +L E ++ E++ + L + + ++ + +
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARREAKNII 577
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
AK + D +++D R + + ++E + +++ + +V +
Sbjct: 578 KEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHKGEALKN 637
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+ + +K N +
Sbjct: 638 VKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKDLRAAKGSNFNSN 692
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
+ + +K ++ + ++ ++S+DLRGM EEA + +D L A
Sbjct: 693 SSKTKKSKKLNLN---------------LRKVESSVDLRGMDAEEAIYTVDKYLDEAYLG 737
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+ ++HG GTGV+++ ++++L+ HP V +Y + G TV IK
Sbjct: 738 GLGEVTIVHGKGTGVLRKTIMDMLKGHPHVKRYRLGEYGEGGTGVTVVEIK 788
>gi|354580077|ref|ZP_08998982.1| MutS2 family protein [Paenibacillus lactis 154]
gi|353202508|gb|EHB67957.1| MutS2 family protein [Paenibacillus lactis 154]
Length = 789
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 244/838 (29%), Positives = 399/838 (47%), Gaps = 107/838 (12%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE+ + LL T A + ++ P S + DI L A G L+P E+ A T+
Sbjct: 40 LEDVKHLLAATDQAYTVDRLKGTP-SFSGVTDINDALKRARIGGTLNPHELLATANTILG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRA 131
+ + + + P+ L + ++E LE+ I CID + LD A
Sbjct: 99 SRRIKRFIA--------GIHEDEPIDILFHLSDLISEQKPLEDAIRACIDDSAEV-LDTA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
S +L IR E + R E L+S+++ + A++ Q LIT R R + +KA +
Sbjct: 150 SAELAQIRRELRNGEVRIREKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + S SGAT F+EP+ V NN E E IL LTA++ +
Sbjct: 205 RSYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRIREEREIEVILQKLTAQVGEQAD 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ +D V ++D FA+A A M P ++ + ++ +HPL+
Sbjct: 264 VLAIDVDLVGQLDFIFAKARLAHVMKASLPRMNDRGYIKLRKG------RHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
P+ D VP+D+++ +++TGPNTGGKT
Sbjct: 312 ----------PM-------------------DQVVPLDVELGNSYTSIIVTGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL +LM+ +GL++PA+ ++ FD I ADIGD QS+EQ+LSTFS H++ I+ IL
Sbjct: 343 TLKTIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
++ +SLVL+DE+G+GTDP+EG ALA +IL+++ + TTHY++L +
Sbjct: 403 TQMTPKSLVLLDEVGAGTDPAEGSALAIAILEHIHSMGCRMIATTHYSELKAYAYERKGI 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NA+ EF + TL PTYR+L G G SNA IA+ +G I++ A+ V + + R
Sbjct: 463 INASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEEDQR 517
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ SL E R E + A + E+ +L +E + L+ + L K + +Q
Sbjct: 518 VEHMIASLEENRHTAEVEREKAEQVRKEMEELRARHREELQRLEDQRDKLVDKARVEAKQ 577
Query: 607 ELNFAKVQIDTVVQDFEN--QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
++ A+ + + ++ D Q AS E + A + RP +
Sbjct: 578 IVDKARSEAEQIISDLRKLAQEEGASVKEHKLIAARKRLEEAEPEQGKRP----GAQRQS 633
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
+ + G++V V SL K VVE+ G + + VQ G M+++V +++ +
Sbjct: 634 KQQRSIEAGDEVRVYSLNQK-GHVVELAGSKEAI-VQLGIMKMKVGLDDLELL------- 684
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IAL 782
+NPA ++ Q +Q + +A+ +N LDLRG +EEA ++D I
Sbjct: 685 -SNPAANAKQAQ--KQHATVLKRTRDANI-------RNELDLRGANLEEALIEVDRFIDE 734
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY-----GCTVAYIK 835
A + +++IHG GTG+++ + E LR H V Y NY G T+A +K
Sbjct: 735 AFLGNLGQIYIIHGKGTGILRTGIQEYLRKHKHVKSYRLG---NYGEGGTGVTIAELK 789
>gi|398818390|ref|ZP_10576981.1| MutS2 family protein [Brevibacillus sp. BC25]
gi|398027832|gb|EJL21362.1| MutS2 family protein [Brevibacillus sp. BC25]
Length = 785
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 252/828 (30%), Positives = 405/828 (48%), Gaps = 114/828 (13%)
Query: 11 IPFGKSLEE---SQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
IPF + L+E +Q+ Q + L + S PL I DI G + A +L+P E+
Sbjct: 35 IPFLR-LDEVITAQQGTEQAATVLRLKGSVPL--GGIRDIRGPVQRARLNAMLAPMELLD 91
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLI 126
+ T+ A + L + E PLL+ + L ELE +I CID
Sbjct: 92 IASTVMAGRRLKTFLLDMCE------DHELPLLQQEAERIEGLRELETEIRRCIDENG-D 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
ILD AS +L +R E + L+S +++ Q+ ++ K L +T R R + +
Sbjct: 145 ILDSASLELRQVRQE----IRQLESRIREKLDQMTRSSTYQKMLMENIVTIRGDRFVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ + GI + S+SGAT F+EP+ VE NN L E E IL +LT +++
Sbjct: 201 KQEYRSVF-GGIVHDQSASGATLFIEPEVIVEMNNKLRELRLREEREVERILYVLTEQVS 259
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ + + + E+D FA+A A M +CP ++ + +V N+ +HPL+
Sbjct: 260 FAVEALIENTEALTELDFMFAKAQLAWSMKAICPRINDRGYV------NMRKARHPLI-- 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
P + VP+D+++ E + +V+TGPNTG
Sbjct: 312 --------------P-------------------REVVVPVDVELGGEYQAIVVTGPNTG 338
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT S+KT+GL SLM+ AGL++PA+ + F I ADIGD QS+EQ+LSTFS H++ I
Sbjct: 339 GKTVSLKTIGLLSLMTMAGLHIPAEEESEMTVFSSIFADIGDEQSIEQSLSTFSSHMTNI 398
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
+ IL + +SLVL DE+G+GTDP+EG ALA SI+ ++ D V TTHY++L
Sbjct: 399 IQILAKMDDKSLVLFDELGAGTDPTEGAALAMSIIDHVIDSGARLVATTHYSELKAYAYD 458
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ-------KLV 535
NA+ EF ++TLRPTYR+L G G SNA IA+ +G II A+ V
Sbjct: 459 RPEVINASVEFDVQTLRPTYRLLIGVPGRSNAFAIARRLGLPEHIIDVARGSISEEDNQV 518
Query: 536 ERLRPERQQHRKSELYQSLMEE--RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
E + +++RKS SL + R++ E R A+ + + + A+D R A
Sbjct: 519 ESMIASLERNRKSAEADSLAAKAARQEAEELRRQLEEERAQFAEEKNKRMERAEDEARIA 578
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
L +E + + +EL + + ++ E++L DA N++++ + + +A R
Sbjct: 579 VQLAKEEAETIIREL---REMMAEGMEIKEHRLIDAKKRLGNAVLELEKEKVKKPAKAVR 635
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
+ + G++V V S G K TV+E +++ LVQ G M+++VK+++
Sbjct: 636 -------------ATQIKVGDEVMVTSFGQK-GTVLEKVNNEE-FLVQIGIMKMKVKRDD 680
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
+ + ++K A P +++ R K LDLRG VE+
Sbjct: 681 MHVQNSIQQKPQAAPYTSVKR---------------------RSDNIKMDLDLRGYNVED 719
Query: 774 ASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ ++D L A + +IHG GTGV+++ V E LR+H V +
Sbjct: 720 SIREIDQFLDDALLAGLHSVSIIHGHGTGVLRKGVHEYLRSHRNVKSF 767
>gi|418325075|ref|ZP_12936285.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU071]
gi|420185530|ref|ZP_14691622.1| MutS2 family protein [Staphylococcus epidermidis NIHLM040]
gi|365228981|gb|EHM70153.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU071]
gi|394254516|gb|EJD99485.1| MutS2 family protein [Staphylococcus epidermidis NIHLM040]
Length = 782
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 245/811 (30%), Positives = 393/811 (48%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S + S + ++R +L+ R A H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
+ Y++ ++ K L A K K Q+V+ A + D ++++ N LRD E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + DD + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R EEA ++LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V +Y P +G TVA +K
Sbjct: 752 QQHLKKHKSVRQYRGGMPSEGGFGVTVAELK 782
>gi|417645954|ref|ZP_12295839.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU144]
gi|329729966|gb|EGG66357.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU144]
Length = 782
Score = 286 bits (733), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 243/811 (29%), Positives = 393/811 (48%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA H+ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEHRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + + ++ HPLL +N+ DVE
Sbjct: 295 PTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S + S + ++R +L+ R A H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
+ Y++ ++ K L A K K Q+V+ A + D ++++ N LRD E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + DD + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R EEA ++LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V ++ P +G TVA +K
Sbjct: 752 QQHLKKHKSVRQFRGGMPNEGGFGVTVAELK 782
>gi|317056492|ref|YP_004104959.1| MutS2 family protein [Ruminococcus albus 7]
gi|315448761|gb|ADU22325.1| MutS2 family protein [Ruminococcus albus 7]
Length = 802
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 253/826 (30%), Positives = 389/826 (47%), Gaps = 109/826 (13%)
Query: 26 QTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+T++AL M +++ +I +++ LN A +G LS E+ +++ L N + + +
Sbjct: 51 KTASALNMSIKNGTPAFYSINNVSASLNRAKAGGTLSLGELLEIKKVLGQTNELCRWFDQ 110
Query: 85 AAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
+ D S L E L N + LE I +D + L D AS +L IR +
Sbjct: 111 ----NEDKNTPLSYLFEQLFPNKSLWQRLETAI---LDSENLS--DDASPELRSIRNKIA 161
Query: 144 RN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
+ E LD ++K + Q + + + ++T R R V +K K + G+ S
Sbjct: 162 KAGLKIRETLDKMIKSPSTQKY----LQESIVTMRDGRFVVPVKTEFKGNV-GGLVHGTS 216
Query: 200 SSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
++G+T F+EP VE NN EVR L E E IL+ + E A + +I+ D +++
Sbjct: 217 ATGSTLFIEPISVVEANN-EVRILQGKEQDEIHRILTDFSKECAMMQPQIESSYDAAVKL 275
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
DL FA+A A M V P +S D I + +HPL+ + N +
Sbjct: 276 DLYFAKANLAAKMRAVDP------EISDDGIIVLNKARHPLI-------------DENKV 316
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
VPI+ + + V+VITGPNTGGKT ++KT+GL +LM+
Sbjct: 317 ----------------------VPINFRSGTDYNVLVITGPNTGGKTVTLKTVGLLTLMT 354
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
GL +PA + ++ + ILADIGD QS++Q+LSTFS H+ ++ DI++ ESLVLID
Sbjct: 355 MCGLMIPASDGCKISVYKNILADIGDRQSIQQSLSTFSSHMGKVKDIIDKADHESLVLID 414
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+GSGTDP EG ALA SI++ LR V TTHY ++ ENA+ EF ++T+
Sbjct: 415 ELGSGTDPVEGAALAVSIIERLRQVGATVVTTTHYQEIKMYALDTDGVENASCEFDVDTM 474
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
RPTY+++ GS G SNA I+K++G D II A+ L+ + R + L + R
Sbjct: 475 RPTYKLVIGSPGKSNAFAISKNLGIDDDIIDYAKSLISE-----ENRRFEHIIDDLEKAR 529
Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
LE A E L E++++ K K ++ + EL A+ Q +
Sbjct: 530 ISLEENNLLAEKYRKEAESLRNELDEQ-----------KQKFMEEKEFELEKARRQASDI 578
Query: 619 VQDFENQLRDASADEINSLIKESESA---IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
V + + + A DE++ L KE E AI + + + T Q E
Sbjct: 579 VNRVQRESQ-ALVDELDKLRKEKEKTGFTQKAIDARQKQRSTMNKLYLEANPVTQQTDED 637
Query: 676 -VHVKSL--GDKL--------ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
V + L GD + VV P D VQ G M+ ++ +R + +
Sbjct: 638 YVLPRPLKKGDTVLITDTKRNGIVVTPPDDKGMCFVQTGIMKTKIDVKKLRLVEKQQ--- 694
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IAL 782
PA +KQQ ++ G + E+ R T LD+RG +E H++D I
Sbjct: 695 ---PAKTSQKQQTKKKRG-VSTKGVESRMTRRFSTE---LDIRGYASDEGIHEMDSFIDN 747
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
S++ +IHG+GTGV+K V LR HP V Y P YG
Sbjct: 748 CVMSGISMVTIIHGIGTGVLKNAVRNHLRRHPSVKSYR---PGVYG 790
>gi|420155006|ref|ZP_14661877.1| MutS2 family protein [Clostridium sp. MSTE9]
gi|394759848|gb|EJF42511.1| MutS2 family protein [Clostridium sp. MSTE9]
Length = 802
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 258/821 (31%), Positives = 402/821 (48%), Gaps = 105/821 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSE---ICAVRR 70
S +E ++ L +T A +M P S ++++A L A +G +L+ + I V R
Sbjct: 52 STDEVRRRLQETDDAFVLMAKFGSP-SFSGLKNVANPLRRAQAGGVLNLVDFLRIAGVLR 110
Query: 71 TLRAVNNVWKKLTEAAELDGD-SLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
T+RA+++ W++ +E + D + P L + N + EE++ +L I
Sbjct: 111 TMRAISD-WRRKSEGMKTTLDWRFESVVPNKYLEEKINAVVISEEEVADNASPELASIRR 169
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
R +R E LD +++ A Q + + P++T R R V +KA +
Sbjct: 170 RIRAASSRVR-------EQLDKMIRSAAYQKY----LQDPIVTMRGGRYVVPVKAECRGE 218
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SSSGAT F+EP G VE NN E+R L + E AE IL+ L+AE I
Sbjct: 219 IP-GLVHDTSSSGATVFVEPMGVVEANN-EIRVLQSRESAEIERILAELSAEAGGFADLI 276
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ +DL FA+ A M P ++ + + + +HPL+
Sbjct: 277 IESYHAAVGLDLIFAKGQLAYKMKASMPKVNDTGRILLNQA------RHPLI-------- 322
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+P + VP++I++ +VITGPNTGGKT ++
Sbjct: 323 -------DPKQV--------------------VPMNIELGTTFDTLVITGPNTGGKTVTL 355
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL +LM+ GL LP ++ + F +LADIGD QS+EQ+LSTFS H++ I+ I+E
Sbjct: 356 KTLGLLTLMAMCGLMLPVGDNSEISVFHQVLADIGDEQSIEQSLSTFSAHMTNIIQIIEQ 415
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SL+L+DE+G+GTDP EG ALA +IL+ LR+R TTHYA+L + EN
Sbjct: 416 ADERSLILLDELGAGTDPVEGAALAMAILEALRERHARVAATTHYAELKAYALQTAGVEN 475
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
+ EF + TLRPTYR+L G G SNA I+ +G +++I+ RA++LV + R
Sbjct: 476 GSCEFDVATLRPTYRLLIGVPGRSNAFAISSRLGLNQEIVDRARELV-----SGEDRRFE 530
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ--- 605
++ Q+L + R+KLE++ R A +AE R I +EA++ R AKE +Q +
Sbjct: 531 DVVQNLEQSRQKLEAERRQAQEQNAE----ARRISEEAREYRERLEREAAKEIEQARERA 586
Query: 606 -QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSET 663
Q + + Q D ++++ E R + S+ E + + A + + D S E
Sbjct: 587 AQLVARTRAQADALLEELEEMKRQGA----KSMTAEQRARMKAGMRDMESASDPVSRKEP 642
Query: 664 NTSSFTPQF--GEQVHVKSLGDKLATVVEVPG-DDDTVLVQYGKMRVRVKKNNIRPIPNS 720
T G+ V + + DK TVVE P DD VLVQ G ++ RV N+R
Sbjct: 643 ETYVLPRPLKAGDDVLIFDI-DKEGTVVETPAPDDKKVLVQAGIIKTRVPVENLR----- 696
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
L ++ ++R++ +G+ N V T +D+RG EA +D
Sbjct: 697 ----------LLEQKTQNRKARRSGTRNVPKRSDAPVMT---EVDVRGEDSIEAVMSVDR 743
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A+ A L +IHG GTGV++ V + LR HP V Y
Sbjct: 744 AIDSALLSGIHQLTIIHGKGTGVLRTAVQQHLRRHPSVRTY 784
>gi|334127861|ref|ZP_08501763.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
gi|333388582|gb|EGK59756.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
Length = 784
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 241/808 (29%), Positives = 381/808 (47%), Gaps = 96/808 (11%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ A+ ++Q Q I D+ I+ A G +L E+ +V T+ + NV K
Sbjct: 45 RLHQETAEAVQVLQMQTPPFGGIYDLRQIMKKASMGSVLEVDELRSVMSTMAGMRNV-KY 103
Query: 82 LTEAAELDGDSLQRYSPLLELLKNC--NFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
++D L+ + LE+L + ++E F D L R + +L+ +
Sbjct: 104 FFRDLDIDVSILKEQARPLEILGMVERHLKDAIDEHGNFRDDASPE--LRRITRELQTAQ 161
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
A R + L ++L A Q + + ++T R R + +K ++ P G+ + S
Sbjct: 162 A---RAKDRLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQEYRNYFP-GVIHDQS 213
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
+SGAT F+EP VE NN ++ + E IL LTAEIA++ R ++ + ID
Sbjct: 214 ASGATLFVEPLATVELNNTVRQMELARTQEIQRILRKLTAEIAQNARILEENCAILSTID 273
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
L FARA A+ M+ P L+ V + +HPLL P
Sbjct: 274 LIFARARLAREMEAYPPTLNRNGRVHLKRA------RHPLL----------------P-- 309
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
D VPIDI++ V++ITGPNTGGKT SMKTLGL +L+++
Sbjct: 310 -----------------RDKVVPIDIELGKSFSVLLITGPNTGGKTVSMKTLGLLALLAQ 352
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
G +LP +P + I ADIGD QS+EQ+LSTFS H IV I++ + L+L+DE
Sbjct: 353 TGCFLPTAPDSEIPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDKAEQGDLILLDE 412
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+G+GTDP EG ALA SI+++ R V TTHYA L T ENA+ EF L+TLR
Sbjct: 413 VGAGTDPDEGAALARSIIEHFLRRNICTVATTHYAALKTFAYTQTGVENASVEFDLKTLR 472
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
PTYR+L G G SNA +I++ +G I+ RA+ + E H ++ + L +E++
Sbjct: 473 PTYRLLIGIPGASNAFSISRQLGLSPDIVARAEIYIS----EEHTHFEN-VVNELEQEKK 527
Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 619
E++ + AE+ + E + L K ++ + A+ + +
Sbjct: 528 DYEARNHMLHAKEAELTAREARLCTERDTFTKMRQELLHKACEEANNIVRMARRSAEETI 587
Query: 620 QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP------QFG 673
+ + Q D E I+E+ + EA+ D ++ N S P Q G
Sbjct: 588 KSLKEQFDDHGVKERRKAIQEARDRLN---EAYVEGD----AQRNESVGKPVRAGEVQSG 640
Query: 674 EQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLR 733
+ V++ SL + TV+ + G + T VQ G +R VK N R + R +
Sbjct: 641 DIVYIPSLAQE-GTVLAIQGKELT--VQVGGLRTIVKMNACRFV------------ARKK 685
Query: 734 KQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVL 791
KQ+ + S+ S + P++ D+RGM V EA L I A + S +
Sbjct: 686 KQRAGKLHVSSSISGKATDISPQI-------DVRGMTVAEAESVLGKFIDDAVFMGLSKI 738
Query: 792 FVIHGMGTGVVKERVLEILRNHPRVAKY 819
+IHG GTG +++ + + L++H V +
Sbjct: 739 LLIHGKGTGALRQGLQDYLKHHRSVLNF 766
>gi|445059987|ref|YP_007385391.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus warneri SG1]
gi|443426044|gb|AGC90947.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus warneri SG1]
Length = 782
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 241/811 (29%), Positives = 399/811 (49%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + +A ++ + G +L+ +E+ A++R ++ V N +K L+ D +Y L
Sbjct: 65 LSGLTKVAQYIHRSTIGGVLNVTELNAIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ LT+L + I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 SQMAQLPILTDLFKDINDKCDAHDL--YDHASYELQSIRSKISSTNQRIRQNLDRVVK-- 178
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+Q+ + D ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 179 -SQVNRKKLSD-AIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT+++A E + L + ++ +D A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTSQVA-VESDALLLAESIMGHLDFLIAKARYARAIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P ++ V ++ HPLL + +N+ D+E
Sbjct: 295 PTFHNERTVYLPNAY------HPLL------DHNTVVANTIEFVDDIE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++G+ +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R+ L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDHVRNLGALVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S S + E+R +L+ + A + H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQTTHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E+ Y++ ++ K L A K K Q+V+ A + D ++++ +LRD +
Sbjct: 554 ELEKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADAILKELR-ELRDKKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + DD + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQNVQKQKYDKIQAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ GD++ V VQ G +++++ PI + ++ P + +R
Sbjct: 657 LELVGDEEAV-VQMGILKMKL------PIEDLEKMKKKKETPTKMVTRANR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R E+A +LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTVKTELDLRGYRYEDALIELDQYLDQAVLSNFEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V + P +G TVA +K
Sbjct: 752 QQHLKRHKSVKTFRGGMPSEGGFGVTVASLK 782
>gi|312127327|ref|YP_003992201.1| muts2 family protein [Caldicellulosiruptor hydrothermalis 108]
gi|311777346|gb|ADQ06832.1| MutS2 family protein [Caldicellulosiruptor hydrothermalis 108]
Length = 787
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 241/792 (30%), Positives = 391/792 (49%), Gaps = 111/792 (14%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI+ IL A + +L+P I AV R L+ V L A DG L+ L LK
Sbjct: 70 DISLILKKARAQAILTPHGILAVGRILKLSQEVRSYLANA---DGSYLKSSREKLFYLKE 126
Query: 106 CN------FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLK 154
FLT E ILD AS L+ IR +R R +E L+ +++
Sbjct: 127 LTARIDQTFLTPEE-------------ILDTASPRLKEIR-DRIRRLETRIRDELNRMIR 172
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
Q F + +P+IT R ++ + +KA HK + GI + S++GAT F+EP VE
Sbjct: 173 DHKIQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGATLFVEPFVCVE 227
Query: 215 FNNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
+N ++R++ SE EE IL L+ I+++ EIK + + E+D+ F +A +A
Sbjct: 228 ISN-QIRVARSEEKEEIERILQELSQLISRNYNEIKQNFESLSELDILFTKAQWAHQFRA 286
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PIL++ + IN++ +HPL+ +
Sbjct: 287 SKPILNTAGY------INLKKARHPLIEKERV---------------------------- 312
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
VPID+ + E V+VITGPNTGGKT ++KT+GL L++++G++LPA +
Sbjct: 313 -------VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVC 365
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+ Q+LSTFS H+ I++I + +LVL+DEIGSGTDP EG ALA
Sbjct: 366 VFSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALA 425
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
+IL++L + V TTHY +L ++ RFENA+ EF + TL+PTYR+L G G SN
Sbjct: 426 KAILKFLYRKGSKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSN 485
Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
AL I+ ++G +I++ A+ + + E +++ + +R++LE +A L
Sbjct: 486 ALYISSNLGLKEEIVELAKSYMSKKTLEL-----TDIINEMERKRKELEEALESANKLKI 540
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E +L R +E+E + + +K + ++ ++ F + D V + F+ + A + +
Sbjct: 541 EAENLKRSLEEERRRFEAEKQRIKERSVKEARE---FVQRVEDEVEKLFKELRKIAESLK 597
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVE 690
++K+ E + + S E S P+ G++V+VKS D V
Sbjct: 598 EKEMLKQLEEKKREYENLVKSIEQASQKEKKLQSKLPENLRLGQKVYVKSF-DAEGFVES 656
Query: 691 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 750
+P + V+ G M++ V +++ I +ED + G S+++
Sbjct: 657 LPDSKGNLTVRIGIMKLSVNISDVFEI------------------EEDTTVKNLGLSSKK 698
Query: 751 ASYGPRVQTSKN-SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 807
VQ S + S+D+RG ++A ++D L A + +IHG GTGV+++ +
Sbjct: 699 GV--EVVQKSIDISIDVRGKTSDDAILEVDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIR 756
Query: 808 EILRNHPRVAKY 819
LR HP V +
Sbjct: 757 NFLRRHPHVKSF 768
>gi|153810971|ref|ZP_01963639.1| hypothetical protein RUMOBE_01362 [Ruminococcus obeum ATCC 29174]
gi|149832859|gb|EDM87942.1| MutS2 family protein [Ruminococcus obeum ATCC 29174]
Length = 793
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 250/811 (30%), Positives = 377/811 (46%), Gaps = 102/811 (12%)
Query: 26 QTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK-KLT 83
QT AL + Q + ++DI G L G LS EI AV L + V
Sbjct: 49 QTKDALTRLFQKGSISFGNVKDIRGSLKRLEIGSALSIQEILAVCGLLENTSRVKTYSRK 108
Query: 84 EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
E +L GDSL + + LT L +I CI + I D AS L IR
Sbjct: 109 ERNDLPGDSLD------SMFDGLSPLTPLSTEIRRCILSEEEIS-DDASPALRQIR---- 157
Query: 144 RNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
RNM+ + + A + + +IT R R C+ +KA +K +P G+ + SS
Sbjct: 158 RNMKITNDRIHTQLAGLVNGSARTYLQDSVITMRNGRYCIPVKAEYKGQVP-GMIHDQSS 216
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
+G+T F+EP V+ NN L E E IL+ L+ +IA + I ++ ++++D
Sbjct: 217 TGSTLFIEPMSVVKLNNDMRELELQEQKEIEVILADLSQQIATEQEAISLNLELMVQLDF 276
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
FARA A M+ P+ + + IN++ +HPL+ N +
Sbjct: 277 IFARATLAMEMNASEPVFNDEGR------INLKKARHPLI-------------NKKKV-- 315
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
VPIDI++ E ++VITGPNTGGKT S+KT+GL +LM ++
Sbjct: 316 --------------------VPIDIRLGDEFDLLVITGPNTGGKTVSLKTVGLLTLMGQS 355
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
GL++P + L F + ADIGD QS+EQ+LSTFS H++ IV L R SLVL DE+
Sbjct: 356 GLHIPTLDRSELALFHEVYADIGDEQSIEQSLSTFSSHMTNIVSFLGKADRHSLVLFDEL 415
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
SGTDP+EG ALA SIL YL +R + TTHY++L + ENA EF++ETL P
Sbjct: 416 CSGTDPTEGAALAISILSYLHERGIRTMATTHYSELKVFALSASGIENACCEFNVETLSP 475
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
TYR+L G G SNA I+ +G II++A++ + Q ++ SL E R
Sbjct: 476 TYRLLIGIPGKSNAFAISSKLGIPESIIEKAREQI-----NEQDESFEDVLTSLEESRIT 530
Query: 561 LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ 620
+E++ A EI L +++E++ + LD + + + ++ + L AK D ++
Sbjct: 531 IENERTEIAQYKLEIETLKKQLENKQEKLDVQKERIIRQANEEAHKVLQDAKDYADQTMK 590
Query: 621 ---DFENQLRDASADE-----INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
F N+ D +A E + + ++E +A +P + T+
Sbjct: 591 LFHKFHNEYVDTAAVERERQQLRQRLNKAEQKMA------QPTPKKKPKKVLTAK-DIHL 643
Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 732
G+ V V S+ K TV P + VQ G +R +V +++ I P L
Sbjct: 644 GDTVRVLSMNLK-GTVSTRPDSKGYLFVQMGIIRSKVHISDLELI-----DEPVITTPSL 697
Query: 733 RKQQED--RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESR 788
K R S SA S E ++L G V+EA +LD L A
Sbjct: 698 SKTGAGKIRMSKSASVSTE--------------INLLGKTVDEAVAELDKYLDDAYIAHL 743
Query: 789 SVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ ++HG GTG +++ V L+ VA Y
Sbjct: 744 KTVRIVHGKGTGALRKGVHNYLKRQKHVASY 774
>gi|417910746|ref|ZP_12554462.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU105]
gi|418622194|ref|ZP_13184950.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU123]
gi|420187633|ref|ZP_14693653.1| MutS2 family protein [Staphylococcus epidermidis NIHLM039]
gi|341654934|gb|EGS78670.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU105]
gi|374827569|gb|EHR91431.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU123]
gi|394256075|gb|EJE01011.1| MutS2 family protein [Staphylococcus epidermidis NIHLM039]
Length = 782
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 244/811 (30%), Positives = 392/811 (48%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYAHTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNTFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S + S + ++R +L+ R A H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
+ Y++ ++ K L A K K Q+V+ A + D ++++ N LRD E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + DD + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R EEA ++LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V ++ P +G TVA +K
Sbjct: 752 QQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|284048620|ref|YP_003398959.1| MutS2 family protein [Acidaminococcus fermentans DSM 20731]
gi|283952841|gb|ADB47644.1| MutS2 family protein [Acidaminococcus fermentans DSM 20731]
Length = 790
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 239/829 (28%), Positives = 403/829 (48%), Gaps = 106/829 (12%)
Query: 26 QTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+T+ A+ ++ + + L L + DI+ ++ G +L P + A+ T+ + ++ + L E
Sbjct: 49 ETAEAVQLLDEGKRLPLGGMTDISPLVKRTRVGSILEPEDFKAIGDTIDGLRHLKQFLLE 108
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----A 140
E + +L+ Y P L + L +++ +D K I D AS L+ +R A
Sbjct: 109 DTE-NAPALRDYGPQL------GDFSRLSKQLSSALDEKG-NIKDNASVKLQGLRTGILA 160
Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
+ R + L+SLL Q + L+T R R + IK ++ P G+ + S+
Sbjct: 161 AKNRVKDKLNSLLHDPNNQKY----FQDALVTMREDRYVIPIKQEYRLNFP-GVVHDQSA 215
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
SGAT F+EP V NN + E AE IL LT + I +D ++DL
Sbjct: 216 SGATLFVEPMAVVNLNNDIKKYRLEEQAEVERILRTLTGHVGSEAENILSSLDIAAQVDL 275
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A+A AQ + P++ Q + +HPLL
Sbjct: 276 IGAKAALAQKLHCCRPMMILQQRLRITQG------RHPLL-------------------- 309
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
D E VP+DI + + ++ITGPNTGGKT ++KT+G+ +LM++A
Sbjct: 310 DQEKV---------------VPLDINLGDDFTTLLITGPNTGGKTVALKTVGVFALMAQA 354
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
G+++PA+ LP F + ADIGD QS+EQ+LSTFSGH+ ++ IL+ V LVL+DE+
Sbjct: 355 GMFVPAR-EAILPVFGGVYADIGDEQSIEQSLSTFSGHMKNMISILDEVREGDLVLVDEV 413
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
GTDP+EG ALA ++++YL + L ++TTHY++L + ENA+ EF ETLRP
Sbjct: 414 CVGTDPTEGAALAMAMIEYLYKKKVLTIMTTHYSELKTFAYEHEGMENASVEFDPETLRP 473
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEERR 559
TY++L G G SNA I+K +G + I+ A+ + + H E + Q+L ERR
Sbjct: 474 TYKLLMGVPGSSNAFYISKRLGLPQGILDEARTFIG------EGHSNMERVLQNLEGERR 527
Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 619
+ ES+ ++L E L E+ + +DL++ + K +Q + A+ + +++
Sbjct: 528 EYESRKDEISALQREAEYLKNELTRQKQDLEKSRNAILRKAREQADELYRNARRESTSIL 587
Query: 620 QDFENQLRDASADEINSLIKESESAIAAIVEAHRP--DDDFSVSET------NTSSFTPQ 671
++ A+ D + S + + E R + +FS+ +S
Sbjct: 588 KELR-----ANQDMVES------RKVEQLAELSRKVLNKNFSIDGKPMPEGQGLTSGNAA 636
Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
G++V+VK +G T+V + G + TV R+ + K N++ K A P+
Sbjct: 637 VGKKVYVKKIGQS-GTIVALNGKEVTV-------RIGIMKMNLKLKDCLLLKEA--PSQP 686
Query: 732 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRS 789
+ ++S S G + + + Q + +D+RG V+EA +D A+ A
Sbjct: 687 RSTHRTLKKSTSQGHN----LFVKKAQDATVQIDVRGKTVDEAIPYVDKAIDDALLAGMD 742
Query: 790 VLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYIK 835
++HG GTG++++ +LE L HP V K E +P+N +G T+ ++K
Sbjct: 743 RFRLVHGKGTGMLRKGLLEYLDQHPNVLKTEM-APLNEGGFGATIVWVK 790
>gi|167747774|ref|ZP_02419901.1| hypothetical protein ANACAC_02495 [Anaerostipes caccae DSM 14662]
gi|167653136|gb|EDR97265.1| MutS2 family protein [Anaerostipes caccae DSM 14662]
Length = 799
Score = 286 bits (731), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 248/820 (30%), Positives = 383/820 (46%), Gaps = 112/820 (13%)
Query: 26 QTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
QT AL + Q + + D+ L LS E+ + L AV N +
Sbjct: 49 QTQDALTRLYKQGSISFFGVHDLGASLKRLKMKGTLSAGELLEIAGLLEAVKNALAYGAQ 108
Query: 85 AAEL-DGDSL----QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
++ D DSL + P+ LLK+ E+I D AS L+ IR
Sbjct: 109 RDDMADADSLDSVFESLVPMDGLLKDIRHCIISPEEIS-----------DDASSALKDIR 157
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
K + + S L + + + L+T R R C+ +K ++ G+ + S
Sbjct: 158 RNMKLTNQKIHSQLTAMVSSSSNKDMLQDALVTMRNGRYCIPVKQEYRGQFK-GMIHDQS 216
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
SSG+T F+EP V NN L E E ILSLL+ + + + ++ +D
Sbjct: 217 SSGSTLFIEPMAVVTLNNQLKELEGQEQTEIERILSLLSEQASYDMDGLAQNQKLLVLLD 276
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
FA+A +A+ +G PI D INI+ +HPLL +P K
Sbjct: 277 FIFAKAKYAKDYNGSKPIFRE------DGVINIKQGRHPLL---------------DPKK 315
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VPI++ + ++VITGPNTGGKT S+KT+GL +LM +
Sbjct: 316 --------------------VVPINVSLGDAFSMLVITGPNTGGKTVSLKTVGLFTLMGQ 355
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
AGL++PA L ++ + ADIGD QS+EQNLSTFS H++ IV I++ R SLVL+DE
Sbjct: 356 AGLHIPAFQGSSLGIYEEVFADIGDEQSIEQNLSTFSSHMTNIVSIIQNAHRHSLVLLDE 415
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+ GTDP EG ALA SIL L DR + TTHY++L ENA+ EF +ETL
Sbjct: 416 LCGGTDPVEGAALAISILTDLHDRGVKTMATTHYSELKMFALSTDGVENASCEFDVETLS 475
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
PTYR++ G G SNA I++ +G D II A ++ + +++++ +
Sbjct: 476 PTYRLMIGIPGKSNAFAISRKLGLDNHIIVHASDQIDESVKD---------FETILAD-- 524
Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE-------LNFAK 612
LE +T EI + +EIE+ K L R ++K K + +++ ++ AK
Sbjct: 525 -LEKSKQTIEQEQEEIFEYRKEIENLRKSLKERQENIKEKREKLLREAREEAYRIISEAK 583
Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS--FTP 670
D ++++ N L+ S + N ++ S + + R + D + N +S P
Sbjct: 584 ETADETIKEY-NNLKKQSGKDANRKMEHMRSDLRG--KMSRLEKDMAYRSKNRASKKHEP 640
Query: 671 ---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI---RPIPNSKRKN 724
Q G++V+V SL TV +P + VQ G MR +V ++ + + KR+N
Sbjct: 641 GDFQVGDEVYVTSLSLS-GTVQTLPNSKGDLYVQMGMMRSKVNVKDLEITKSVKQVKREN 699
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IAL 782
A N A R SG + N+ +S P + ++ GM V+EA QLD I
Sbjct: 700 ARNEA---------RNSGRT-AINKSSSIRPEI-------NVLGMTVDEAVSQLDKFIDD 742
Query: 783 ACWESRSVLFVIHGMGTGVVKERV---LEILRNHPRVAKY 819
AC + + VIHG GTG +++ + L+ L+ R++ Y
Sbjct: 743 ACLANLGQITVIHGKGTGALRKGIHNYLKTLKKQKRISGY 782
>gi|150389498|ref|YP_001319547.1| MutS2 family protein [Alkaliphilus metalliredigens QYMF]
gi|229486330|sp|A6TNX0.1|MUTS2_ALKMQ RecName: Full=MutS2 protein
gi|149949360|gb|ABR47888.1| MutS2 family protein [Alkaliphilus metalliredigens QYMF]
Length = 789
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 235/834 (28%), Positives = 402/834 (48%), Gaps = 95/834 (11%)
Query: 15 KSLEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
+S E +L ++TS A +++ Q + L I DI L G L P E+ V+ TLR
Sbjct: 38 QSFGEITQLQSETSEAQSILIQRGNIPLGGIHDIKQYLRKTEIGSYLDPKELLLVKDTLR 97
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRA 131
N+ E GD ++ + L++ +E++I CI D + I D A
Sbjct: 98 TARNLKSFFKE-----GDDQTKHPIVSGLIQGLQSFRAIEDRIEICIVSDTE---ISDHA 149
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
S L+ IR + + + + L + + +IT R+ R V +K H+ +P
Sbjct: 150 SSTLKNIRRQISSKNDAVRNKLNGIINSSTTQKYLQDAIITMRQDRYVVPVKQEHRGNVP 209
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
G+ + SSSGAT F+EP V+ NN L E E IL + IA+ E++
Sbjct: 210 -GLIHDQSSSGATLFVEPMAVVQLNNELRELKIKEHIEIERILMEIAEMIAQYATEMRNN 268
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ ID FA+ + M GV P+L+ + +++I+ +HPLL
Sbjct: 269 QIILTAIDFVFAKGKLSLEMKGVEPLLN------VEGNVHIKNGRHPLL----------- 311
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
+D VP ++ + + +VITGPNTGGKT ++KTL
Sbjct: 312 ------------------------NADEVVPTNLWIGETFQTLVITGPNTGGKTVTLKTL 347
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL S+M+++GL++PA RL FD I ADIGD QS+EQ+LSTFS H++ IV+I+E V+
Sbjct: 348 GLLSMMAQSGLHVPADYGTRLAIFDQIFADIGDEQSIEQSLSTFSSHMTNIVNIVEEVTS 407
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
SLVL DE+G+GTDP+EG AL +IL +LR+ V TTHY++L + ENA+
Sbjct: 408 NSLVLFDELGAGTDPTEGAALGMAILNHLREMNVTTVATTHYSELKQYALTNEGVENASV 467
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
EF + TL PTYR+L G G SNA I+K +G ++QRA++ + + + +L
Sbjct: 468 EFDVATLSPTYRLLIGVPGKSNAFEISKKLGLPDGLVQRAKRFLSQDTIHFE-----DLL 522
Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
Q++ + RR+ E + + A + E ED + L+ + + ++ + + A
Sbjct: 523 QNIEKNRRESEIERQEAKRIRLEAEKFAEGYEDRKQRLEAQRDQILRDAKKEAYRLVKEA 582
Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIAA----IVEAHRPDDDFSVSETNTSS 667
K+ + +++ + A E+N ++++++ + + + H+ +
Sbjct: 583 KMDSEHIIKGLREMKFELEAKEMNKKMEDAKNQLTGKMNDLSDHHQ---QILNKKNKKPP 639
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
+ G+ V + SL +++ V+ V VQ G M+V + +N+
Sbjct: 640 KNLKPGDAVRILSL-NQVGHVLNEVDPKGEVQVQAGIMKVNMHISNLE------------ 686
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACW 785
R+ +++ +QSG+ + +K+ +D+RG +EEA ++D L +
Sbjct: 687 ---RVSPEKDIQQSGTG------KIMKSKTGDTKSEVDVRGKNLEEAMLEIDKYLDDSYI 737
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ----ESPMNYGCTVAYIK 835
+ + +IHG+GTGV+K + ++L+ + V + + E M G T+ +K
Sbjct: 738 VGLTQVTIIHGVGTGVLKAGIKQMLKKNKHVRTHREGVYGEGGM--GVTIVELK 789
>gi|418411583|ref|ZP_12984850.1| MutS2 protein [Staphylococcus epidermidis BVS058A4]
gi|420167521|ref|ZP_14674174.1| MutS2 family protein [Staphylococcus epidermidis NIHLM087]
gi|394238147|gb|EJD83630.1| MutS2 family protein [Staphylococcus epidermidis NIHLM087]
gi|410892309|gb|EKS40103.1| MutS2 protein [Staphylococcus epidermidis BVS058A4]
Length = 782
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 243/810 (30%), Positives = 389/810 (48%), Gaps = 107/810 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL N E E IL+ LT ++ + + +ID A+A +A+ + G P
Sbjct: 236 NQISRLRNDEAVERERILTELTGLVSADSDALLVAESVMGQIDFLIAKARYARTIKGTKP 295
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
D +I + HPLL +N+ DVE
Sbjct: 296 TFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------- 330
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+
Sbjct: 331 ----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIFE 374
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA SI
Sbjct: 375 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMSI 434
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA +
Sbjct: 435 LDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFD 494
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHAE 574
I+K +G II +A+ ++ E +S + S + ++R +L+ R A H
Sbjct: 495 ISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHDA 554
Query: 575 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ Y++ ++ K L A K K Q+V+ A + D ++++ N LRD E
Sbjct: 555 LSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE- 605
Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVV 689
+KE E I + + DD + ++ G++V V S G K V+
Sbjct: 606 ---VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEVL 657
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 658 ELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR---------- 700
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 807
QT K LDLRG R EEA ++LD L A + +++IHG GTG +++ V
Sbjct: 701 --------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQ 752
Query: 808 EILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V +Y P +G TVA +K
Sbjct: 753 QHLKKHKSVRQYRGGMPSEGGFGVTVAELK 782
>gi|402303647|ref|ZP_10822737.1| MutS2 family protein [Selenomonas sp. FOBRC9]
gi|400378042|gb|EJP30906.1| MutS2 family protein [Selenomonas sp. FOBRC9]
Length = 785
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 247/829 (29%), Positives = 392/829 (47%), Gaps = 103/829 (12%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ A++++Q Q I D+ L A G L E+ + T++ + NV K
Sbjct: 45 RLHAETAEAVSVLQMQAPPFGGIYDLRHTLQKATLGSTLEVEELREIMSTMQGMRNV-KY 103
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
A+L L+ +E+L LE+ + ID + + D AS +L + E
Sbjct: 104 FFRDADLSLPLLKEKGVRIEILGM------LEKHLQNTID-EHGNLRDDASPELRRVTRE 156
Query: 142 ----RKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ R E L ++L A Q FQ + ++T R R + +K ++ P G+
Sbjct: 157 MLSAQNRVKERLSTILHDAAYQKCFQ-----EAIVTVRAERYVIPVKQEYRAQFP-GVIH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NN ++ + E IL L+ EIA++ + +
Sbjct: 211 DRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIARAADILSENCTILA 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+DL FARAG ++ M+ P + +V + +HPLL
Sbjct: 271 ELDLIFARAGLSRDMEAYAPTFNRAGYVRLQRA------RHPLL---------------- 308
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P D VPIDI++ V++ITGPNTGGKT SMKTLG+ +L
Sbjct: 309 P-------------------KDRVVPIDIELGRGFSVLLITGPNTGGKTVSMKTLGILAL 349
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++G +LP + LP + I ADIGD QS+EQ+LSTFS H IV IL+ LVL
Sbjct: 350 MAQSGCFLPTASGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAESNDLVL 409
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP EG ALA SI+++L R + TTHYA L NA+ EF
Sbjct: 410 LDEVGAGTDPDEGAALARSIIEHLLQRRISVIATTHYAALKTYAYGRQGVMNASVEFDTA 469
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTYR+L G+ G SNA +I++ +G I+ RAQ+ ++ + H + E + +E
Sbjct: 470 TLRPTYRLLIGTPGASNAFSISRRLGLADAIVARAQRYID------EDHVRFETVVNELE 523
Query: 557 ERRKL----ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
+ +++ +++ RT A + + + R D+ R+ H +E + +E A+
Sbjct: 524 KEKRVYETRQTELRTRAQKISAMEEQLRTERDKFIRAHRKLLHKAREEANGIVRE---AR 580
Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
+ ++ + Q D E I+E+ + EA+ P S + +
Sbjct: 581 RSAEETIKKLKQQFDDHGVKERRKAIQEARE---RLTEAYMPQRHPSAVKVGQKIRAGEI 637
Query: 673 --GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
G+ VH+ L + TV+ V G + T VQ G +R VK + + K+K+
Sbjct: 638 EPGDIVHITRLAQE-GTVLAVQGKELT--VQIGALRTVVKTDECTFVSRKKKKHRTE--- 691
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESR 788
+ G G +++A+ RV + +D+RGM V EA L I A +
Sbjct: 692 ---------KVGFTGGISQKAA---RVHS---QIDVRGMTVSEAELTLGKFIDDAVFAGL 736
Query: 789 SVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
S + +IHG GTG ++ + + L+ HP V + S G +VA +K
Sbjct: 737 SKILIIHGKGTGALRIGIQDYLKRHPSVLSVAFADISEGGSGASVAELK 785
>gi|153955797|ref|YP_001396562.1| recombination and DNA strand exchange inhibitor protein
[Clostridium kluyveri DSM 555]
gi|219856164|ref|YP_002473286.1| hypothetical protein CKR_2821 [Clostridium kluyveri NBRC 12016]
gi|229486370|sp|A5N245.1|MUTS2_CLOK5 RecName: Full=MutS2 protein
gi|254766597|sp|B9E5U7.1|MUTS2_CLOK1 RecName: Full=MutS2 protein
gi|146348655|gb|EDK35191.1| MutS-related protein [Clostridium kluyveri DSM 555]
gi|219569888|dbj|BAH07872.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 786
Score = 285 bits (730), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 245/813 (30%), Positives = 397/813 (48%), Gaps = 108/813 (13%)
Query: 24 LNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
L +T AL ++ S+ P D + D+ + A G +L P++I + L+A K
Sbjct: 47 LEETEEALKLIISRGNPPFD--GVYDVRQGVKMAQKGSILMPAQIFRIGAILKASRRFEK 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ E +G + + ++ + L LE+KI I+ + I DRAS L IR
Sbjct: 105 YIKAKGEGEG-----FRIIEDICQGIVLLKGLEDKIFISIESEDEI-SDRASSLLYNIRK 158
Query: 141 E-RKRNM---ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
R +N + ++SL++ ++ + L T R R + ++A +K L+P G+
Sbjct: 159 SIRDKNASVRDKVNSLIRNYSSYL------QDNLYTIRGDRYVLPVRAENKALVP-GLVH 211
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSG+T ++EP V NN L E AE IL L+ EI + IK D +
Sbjct: 212 DQSSSGSTLYIEPMALVNLNNEIKELKLKEKAEIDRILYELSKEIHDNIVVIKNNADIIW 271
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+D FA+A F ++G PI++ + +EG +HPL+
Sbjct: 272 ELDFIFAKAKFGSELNGNIPIVNDNCIIDI-----VEG-RHPLI---------------- 309
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
TV VP+D+ + + +VITGPNTGGKT ++KT+GL +
Sbjct: 310 --------DRKTV-----------VPMDVYMGKDFTCLVITGPNTGGKTVALKTMGLLHI 350
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+ +GL +PA+ + + +F I ADIGD QS+EQNLSTFS H++ I++I+ +SL+L
Sbjct: 351 MALSGLMIPARENSTVGFFTEIFADIGDEQSIEQNLSTFSSHMTNIINIINNSDEKSLIL 410
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP+EG ALA SIL+ L+DR + V TTHY++L K ENA+ EF ++
Sbjct: 411 FDELGAGTDPTEGAALAVSILENLKDRGSMIVATTHYSELKAYALKSNGVENASVEFDVD 470
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
TL+PTY+++ G G SNA I+K +G II+ A++ + E L+ E +L QSL
Sbjct: 471 TLKPTYKLMIGIPGKSNAFEISKRLGLPEFIIKAARENIASEALKFE-------DLIQSL 523
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIE------DEAKDLDRRAAHLKAKETQQVQQEL 608
E+R K E+ R A L E + + E E +D AH KA+E + +E
Sbjct: 524 QEKRIKAENYFREAEILKREAAKIKEKYEQKAIRLQEVRDKSITEAHRKAREIIRESKE- 582
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ D +++D + + + ++E + +E + + SE
Sbjct: 583 -----EADRILKDIRELEKMGYSSSVKHELEERRKMLKDKLENVEENLYKAKSEDGQRLK 637
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
+ + GE+V + SL K+ V+ P + V VQ G M++ V +R
Sbjct: 638 SVKEGEEVFIPSLNQKV-LVLSKPDNKGEVQVQAGIMKISVNLKELR------------- 683
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
AP+ + D++ + N +++ S+DLRGM EA++ D L A
Sbjct: 684 APKGSTKNTDKKLKREANLN--------LRSVATSVDLRGMDSIEAAYITDKYLDDAYVA 735
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ +IHG GTG+++ + +L++H V Y
Sbjct: 736 GLKEVTIIHGKGTGILRSSITNMLKSHSHVKNY 768
>gi|420210593|ref|ZP_14716016.1| MutS2 family protein [Staphylococcus epidermidis NIHLM003]
gi|394276044|gb|EJE20400.1| MutS2 family protein [Staphylococcus epidermidis NIHLM003]
Length = 782
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 244/811 (30%), Positives = 393/811 (48%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKGTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S + S + ++R +L+ R A H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
+ Y++ ++ K L A K K Q+V+ A + D ++++ N LRD E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDYKGAE 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + DD + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R EEA ++LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V ++ P +G TVA +K
Sbjct: 752 QQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|418616514|ref|ZP_13179438.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU120]
gi|420182831|ref|ZP_14688964.1| MutS2 family protein [Staphylococcus epidermidis NIHLM049]
gi|420214358|ref|ZP_14719637.1| MutS2 family protein [Staphylococcus epidermidis NIH05005]
gi|420217164|ref|ZP_14722348.1| MutS2 family protein [Staphylococcus epidermidis NIH05001]
gi|374820592|gb|EHR84668.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU120]
gi|394249294|gb|EJD94507.1| MutS2 family protein [Staphylococcus epidermidis NIHLM049]
gi|394283723|gb|EJE27888.1| MutS2 family protein [Staphylococcus epidermidis NIH05005]
gi|394290520|gb|EJE34375.1| MutS2 family protein [Staphylococcus epidermidis NIH05001]
Length = 782
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 244/811 (30%), Positives = 393/811 (48%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S + S + ++R +L+ R A H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
+ Y++ ++ K L A K K Q+V+ A + D ++++ N LRD E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + DD + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R EEA ++LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V ++ P +G TVA +K
Sbjct: 752 QQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|314933341|ref|ZP_07840706.1| DNA mismatch repair protein MutS [Staphylococcus caprae C87]
gi|313653491|gb|EFS17248.1| DNA mismatch repair protein MutS [Staphylococcus caprae C87]
Length = 782
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 244/810 (30%), Positives = 394/810 (48%), Gaps = 107/810 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ SE+ ++R ++ V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLIHRANIGGVLNVSELNVIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS L+ IR++ +R +NLD ++K
Sbjct: 123 EKMNQLPVLTDLFQEIKD--KCDTYDLFDHASYALQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 SNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPTSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL N E E IL+ LT ++A I + +ID A+A +A+ + G P
Sbjct: 236 NQISRLRNDEAVERERILTELTGQVAVDADSILIAESVMGQIDFLIAKARYARSIKGTKP 295
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+ V ++ HPLL + E V + + I
Sbjct: 296 TFKKERTVYLPNAF------HPLL-----------------------DKETVVANTIEFI 326
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+
Sbjct: 327 DD------------VETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLVPTLDGSQLSIFE 374
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL + SL+L DE+G+GTDPSEG ALA SI
Sbjct: 375 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILHEADKNSLILFDELGAGTDPSEGAALAMSI 434
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L Y+R+ L + TTHY +L NA+ EF+++TL PTY++L G G SNA +
Sbjct: 435 LDYVRNLGSLVMATTHYPELKAYSYNCEGVMNASVEFNVDTLSPTYKLLMGVPGRSNAFD 494
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHAE 574
I+K +G II +A+ ++ E +S S + E+R +L+ R A H
Sbjct: 495 ISKKLGLSLNIINKAKTMIGTDEQEINSMIESLERNSKCVDEQRIELDRLVREAQETHDA 554
Query: 575 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ Y++ ++ + L A K K Q+V+ A + DT++++ + LRD E
Sbjct: 555 LAKQYQQYQNYEQSLMNEA---KEKANQRVKS----ATKEADTILKELRD-LRDNKGAE- 605
Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVV 689
+KE E I + + DD + + ++ G++V V S G K V+
Sbjct: 606 ---VKEHE----LIDKKKQLDDQYEAKSIKQTVQKKKYDKINAGDEVKVLSYGQK-GEVL 657
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
E+ G+D+ V VQ G +++++ PI + ++ P +++R
Sbjct: 658 ELVGEDEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPAKMVTRQNR---------- 700
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 807
QT K LDLRG R EEA +LD L A + +++IHG GTG +++ V
Sbjct: 701 --------QTIKTELDLRGYRYEEALLELDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQ 752
Query: 808 EILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V+ + P +G TVA +K
Sbjct: 753 QHLKKHKSVSNFRGGMPSEGGFGVTVAELK 782
>gi|310828853|ref|YP_003961210.1| MutS2 family protein [Eubacterium limosum KIST612]
gi|308740587|gb|ADO38247.1| MutS2 family protein [Eubacterium limosum KIST612]
Length = 789
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 248/850 (29%), Positives = 411/850 (48%), Gaps = 129/850 (15%)
Query: 2 GHAVVQKAQ------IPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNS 53
GH V + A+ +P+ +++ E ++ L TS AL MM +P LS I++ + ++
Sbjct: 20 GHCVSEGAKERASSLVPY-ETVYEVERALGVTSEALNMMLRNGRP-PLSEIKNTSDYVHR 77
Query: 54 AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELE 113
A G +LS E+ AV LR V ++ +L+ +L + L LL C ELE
Sbjct: 78 ASIGAMLSMKELLAVASLLRIVKDMENYYCNDTQLE--TLDQLKNLFTLLAPCE---ELE 132
Query: 114 EKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITK 173
++I I + + D AS +L IR E + L + + + + +IT
Sbjct: 133 KEISHKILSEGEMA-DNASRELSRIRREINFKNTRISDKLNGIISASQNEKYLQERIITI 191
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R +R V +K ++ +P GI L+ S+SGAT ++EP VE NN L+ E E I
Sbjct: 192 RNNRYVVPVKQEYRGQIP-GIVLDRSASGATLYIEPLAVVELNNDLKVLAAEEEKEIIRI 250
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L L+ ++A + E+ + ++E+D FA+ + + GV +HVS + I+
Sbjct: 251 LKDLSEKVANYKEEVIEDYNLLVELDFQFAKGKYGLAVGGVL------THVSEEGKIHFI 304
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
+HPL+ + ++ V S DI ++ +
Sbjct: 305 KGRHPLI-----------------------DPKVVVAS------------DIYMDEDINT 329
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
++ITGPNTGGKT ++KT+GL +LM ++GL++P + + I ADIGD QS+EQ+LS
Sbjct: 330 MIITGPNTGGKTVTLKTIGLLNLMVQSGLFVPVREGSATRVYKNIYADIGDEQSIEQSLS 389
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFS H++ IVDI++ ++LVL DE+G+GTDP+EG ALA SIL L +R +V TTHY
Sbjct: 390 TFSSHMTNIVDIMKNADADALVLFDELGAGTDPTEGAALAISILNTLHERGVTSVSTTHY 449
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
++L NA+ EF + TLRPT+++L G G SNA IA+ +G II+ ++K
Sbjct: 450 SELKEYALVTRGVVNASVEFDVATLRPTFKLLIGVPGKSNAFEIARRLGLSEDIIEASKK 509
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED--------- 584
L+ E + R E + E+R+K E++ H EI+ L R+IE+
Sbjct: 510 LI-----ENEAIRFEETLIKIEEKRKKTEAE-------HEEILRLRRQIENMKAEMADER 557
Query: 585 -----EAKDLDRRAAHLKA-------KETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
E+ ++ RA + +ET+++ +E+ + + V+D + +
Sbjct: 558 EKARAESAEMIERAQEEASAIVRDTRQETEEIYKEIRYIQETTAQSVKD------NKKLE 611
Query: 633 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
+ IK+ E I + + RP + + G +VHVKSL K VV++
Sbjct: 612 SLRRKIKDQEKNIFDMYKIARP-----DEDEELDIDDIKMGMKVHVKSL-HKDGEVVKIM 665
Query: 693 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA-PRLRKQQEDRQSGSAGSSNEEA 751
D +V+VQ M+++V ++ SK K A P ++ + DR
Sbjct: 666 PKDSSVMVQTDNMKLKVGLADL-----SKSKAIAKPKEKKVSYKSADR------------ 708
Query: 752 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 809
T LDLRG EE+ + +D I+ A L ++HG GTG +++ +
Sbjct: 709 ------HTMNTKLDLRGKNGEESLYLVDKMISDALVSGTHQLMIVHGKGTGKLRQIIHAY 762
Query: 810 LRNHPRVAKY 819
L+++ + +
Sbjct: 763 LKDNSLIKDF 772
>gi|15895607|ref|NP_348956.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum ATCC 824]
gi|337737556|ref|YP_004637003.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum DSM 1731]
gi|38604976|sp|Q97GM6.1|MUTS2_CLOAB RecName: Full=MutS2 protein
gi|15025349|gb|AAK80296.1|AE007734_10 DNA mismatch repair protein mutS, YSHD B.subtilis ortholog
[Clostridium acetobutylicum ATCC 824]
gi|336292751|gb|AEI33885.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum DSM 1731]
Length = 788
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 248/820 (30%), Positives = 399/820 (48%), Gaps = 97/820 (11%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
P+G SL E ++ + +T A ++ + P + + D+ ++ A G L+P ++ V
Sbjct: 36 PYG-SLYEVKEHIEETKEAFELLMKKGAPPFEGAY--DVTEAVSMAEKGFSLAPGQLLKV 92
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
LR + ++ E + Y + ++ L +E+ I F I
Sbjct: 93 GSMLRCARKFKEYISHKEEEES-----YRIIEDICSGIIPLKNIEDNI-FNAIIGEEEIS 146
Query: 129 DRASEDLELIRAERKRNMENLDSLLK-KVAAQIFQ-AGGIDKPLITKRRSRMCVGIKASH 186
D+AS L IR R++++ ++ +K KV A + + + + L T R R + +KA +
Sbjct: 147 DKASTALYSIR----RSLKDKNASIKDKVNAMMRSYSKYLQENLYTIRGERYVIPVKAEY 202
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P G+ + SS+GAT F+EP G V NN L E AE IL L+A I KS
Sbjct: 203 KAQVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIERILRELSALIYKSIV 261
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+K V E+D FA+A +A ++ P HV+ I+I +HPL+
Sbjct: 262 AVKNNEKIVTELDFIFAKAKYASSINATAP------HVNDKGVIDIVMGRHPLI------ 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P K VP++I + E +VITGPNTGGKT
Sbjct: 310 ---------DPAKV--------------------VPLNIYMGREFTSLVITGPNTGGKTV 340
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT GL +M+ +GL +PA+ + + +F + ADIGD QS+EQ+LSTFS H++ IV I+
Sbjct: 341 TLKTTGLLEVMAMSGLMIPARENSTISFFKEVYADIGDEQSIEQSLSTFSSHMTNIVRII 400
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ +SLVL DE+G+GTDP+EG ALA SIL+ LR R V TTHY++L K
Sbjct: 401 DDADEDSLVLFDELGAGTDPTEGAALAISILEALRKRGTKIVATTHYSELKAYALKTENV 460
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II+ A+K + + E +
Sbjct: 461 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLSDYIIEEARKGISKDTLEFE--- 517
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD---RRAAHLKAKETQQ 603
+L Q+L K E R A L + + E++ + +A H +E ++
Sbjct: 518 --DLIQNLQTRSVKAEENLRKAEFLKEQAEKFKEKYEEKVSSITETREKALHEGRREAKK 575
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ +E AK + D +++D R + E ++ES + + + ++ ++SE
Sbjct: 576 IIEE---AKSEADKILKDMREMERLGYSSEARQRLQESRQKLKE--KLNNAEESLNISER 630
Query: 664 NTSSF--TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
+ + + GE+V + SL K V+ V +Q G M++ VK ++R N
Sbjct: 631 DQGEALKSVKEGEEVFIPSLNMK-GIVISTQDSKGEVGIQAGIMKINVKLKDLRKTNN-- 687
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 781
NP + K + R++ +++ S+DLRG+ EEA ++ DI
Sbjct: 688 -----NPISKKEKAVKKREA------------RLNLKSVAQSIDLRGLDSEEAIYKTDIY 730
Query: 782 L--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
L A + VIHG GTGV++ + +L+ + V Y
Sbjct: 731 LDEAYMAGLGSVTVIHGKGTGVLRNAINTMLKKNSHVKSY 770
>gi|384459066|ref|YP_005671486.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum EA 2018]
gi|325509755|gb|ADZ21391.1| recombination and DNA strand exchange inhibitor protein
[Clostridium acetobutylicum EA 2018]
Length = 806
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 248/820 (30%), Positives = 399/820 (48%), Gaps = 97/820 (11%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
P+G SL E ++ + +T A ++ + P + + D+ ++ A G L+P ++ V
Sbjct: 54 PYG-SLYEVKEHIEETKEAFELLMKKGAPPFEGAY--DVTEAVSMAEKGFSLAPGQLLKV 110
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
LR + ++ E + Y + ++ L +E+ I F I
Sbjct: 111 GSMLRCARKFKEYISHKEEEES-----YRIIEDICSGIIPLKNIEDNI-FNAIIGEEEIS 164
Query: 129 DRASEDLELIRAERKRNMENLDSLLK-KVAAQIFQ-AGGIDKPLITKRRSRMCVGIKASH 186
D+AS L IR R++++ ++ +K KV A + + + + L T R R + +KA +
Sbjct: 165 DKASTALYSIR----RSLKDKNASIKDKVNAMMRSYSKYLQENLYTIRGERYVIPVKAEY 220
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P G+ + SS+GAT F+EP G V NN L E AE IL L+A I KS
Sbjct: 221 KAQVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIERILRELSALIYKSIV 279
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+K V E+D FA+A +A ++ P HV+ I+I +HPL+
Sbjct: 280 AVKNNEKIVTELDFIFAKAKYASSINATAP------HVNDKGVIDIVMGRHPLI------ 327
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P K VP++I + E +VITGPNTGGKT
Sbjct: 328 ---------DPAKV--------------------VPLNIYMGREFTSLVITGPNTGGKTV 358
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT GL +M+ +GL +PA+ + + +F + ADIGD QS+EQ+LSTFS H++ IV I+
Sbjct: 359 TLKTTGLLEVMAMSGLMIPARENSTISFFKEVYADIGDEQSIEQSLSTFSSHMTNIVRII 418
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ +SLVL DE+G+GTDP+EG ALA SIL+ LR R V TTHY++L K
Sbjct: 419 DDADEDSLVLFDELGAGTDPTEGAALAISILEALRKRGTKIVATTHYSELKAYALKTENV 478
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II+ A+K + + E +
Sbjct: 479 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLSDYIIEEARKGISKDTLEFE--- 535
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD---RRAAHLKAKETQQ 603
+L Q+L K E R A L + + E++ + +A H +E ++
Sbjct: 536 --DLIQNLQTRSVKAEENLRKAEFLKEQAEKFKEKYEEKVSSITETREKALHEGRREAKK 593
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ +E AK + D +++D R + E ++ES + + + ++ ++SE
Sbjct: 594 IIEE---AKSEADKILKDMREMERLGYSSEARQRLQESRQKLKE--KLNNAEESLNISER 648
Query: 664 NTSSF--TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
+ + + GE+V + SL K V+ V +Q G M++ VK ++R N
Sbjct: 649 DQGEALKSVKEGEEVFIPSLNMK-GIVISTQDSKGEVGIQAGIMKINVKLKDLRKTNN-- 705
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 781
NP + K + R++ +++ S+DLRG+ EEA ++ DI
Sbjct: 706 -----NPISKKEKAVKKREA------------RLNLKSVAQSIDLRGLDSEEAIYKTDIY 748
Query: 782 L--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
L A + VIHG GTGV++ + +L+ + V Y
Sbjct: 749 LDEAYMAGLGSVTVIHGKGTGVLRNAINTMLKKNSHVKSY 788
>gi|352684296|ref|YP_004896281.1| mutS2 family protein [Acidaminococcus intestini RyC-MR95]
gi|350278951|gb|AEQ22141.1| mutS2 family protein [Acidaminococcus intestini RyC-MR95]
Length = 790
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 243/839 (28%), Positives = 401/839 (47%), Gaps = 108/839 (12%)
Query: 17 LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EE + +T+ A+ ++ + + + L I DI+G++ G LL P E A++ + +
Sbjct: 40 FEEVKLSQEETAEAVRILDEGRRIPLGGITDISGLVKRTRVGSLLDPEEFKAIQDAISGM 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
++ L E +E +L RYS L + + L +++ +D K I D AS L
Sbjct: 100 LDLKAFLKEVSE-TAPALVRYSDEL------HDFSRLSKQLSSVLDEKG-NIKDTASVKL 151
Query: 136 ELIRA----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
+R R R + L LL Q + L+T R R + IK ++ P
Sbjct: 152 SGLRTGILVARNRVKDKLSDLLHDPNNQKY----FQDALVTMREDRYVIPIKQEYRLNFP 207
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + SSSGAT F+EP V NN + E AE IL LT+ + I
Sbjct: 208 -GIVHDQSSSGATLFIEPMAVVNLNNDIKKYVLEEKAEVERILRTLTSHVGAEADHILES 266
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ V ++DL A+A +A+ + P++ H+ ++G +HPLL S+
Sbjct: 267 LAVVAQVDLISAKALYAEALGARRPMMVLDHHLRI-----VKG-RHPLLEQESI------ 314
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
VP+DI++ + ++ITGPNTGGKT ++KT+
Sbjct: 315 -----------------------------VPLDIELGQDFTTLLITGPNTGGKTVALKTV 345
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL +LM++AGL+LPA+ P F + ADIGD QS+EQ+LSTFSGH+ ++ I+ +
Sbjct: 346 GLFALMAQAGLFLPAEE-AIFPVFSGVYADIGDEQSIEQSLSTFSGHMKNMISIIREATD 404
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
LVL+DE+ GTDP+EG ALA +++++ L ++TTHY++L + +NA+
Sbjct: 405 RDLVLVDEVCVGTDPTEGAALAMAMIEHFYKAHVLTIMTTHYSELKTFAYEHEGMQNASV 464
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-L 550
EF ETLRPTYR+L G G SNA I++ +G I+ A+ + ++H E +
Sbjct: 465 EFDPETLRPTYRLLMGVPGSSNAFYISRRLGLPEDILDEARTFIN------ERHSNMERV 518
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
Q+L ERR+ ES+ +L E L +++ E L++ + K + +
Sbjct: 519 LQNLEGERREYESRKDEIETLRRETEILRNQLKAEKTRLEKSRNDILRKAREDADELYRN 578
Query: 611 AKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS------ETN 664
A+ + ++++ Q + ++ L + S A++ +FS+S
Sbjct: 579 ARRESQGILKELRAQQNLVESAKVERLAEMSRKALSK---------NFSISGRTEPEGQG 629
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK---NNIRPIPNSK 721
+S G+ V VK+LG + + V G D TV + KM V +K +P+ K
Sbjct: 630 LTSGNAAVGKVVFVKTLGQE-GKITAVNGRDVTVAIGVMKMNVSMKDCILTKAQPVSPQK 688
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 781
L+K S+GS +E + + Q + D+RG V+EA +D A
Sbjct: 689 THRT------LKK--------SSGSRHE--FFVKKAQDTSVQTDVRGKTVDEAIPDVDKA 732
Query: 782 L--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN---YGCTVAYIK 835
+ A ++HG GTG++++ +L+ L+ HP V K E +P+N +G T+ Y+K
Sbjct: 733 IDDALLAGMDRFRLVHGKGTGMLRKGLLDYLKQHPNVKKTEM-APLNEGGFGATIVYVK 790
>gi|403384307|ref|ZP_10926364.1| MutS2 protein [Kurthia sp. JC30]
Length = 789
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 248/841 (29%), Positives = 398/841 (47%), Gaps = 114/841 (13%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE+ Q+LL + AL++++ + + + I D+ A G +LSP E+ + T+RA
Sbjct: 41 LEKVQQLLAEMDEALSILRIKGSVPMGGIFDVRPHARRAQIGGMLSPKELMEISSTIRA- 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ ++++ E E D + R + + LT L+ +I CID + +D AS+ L
Sbjct: 100 SRIFREFIEVVEADDEV--RIPLFVAKKEELPILTGLQHEINSCIDDNAKV-MDSASQTL 156
Query: 136 ELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
IR + + R + L SL + +A A + +IT R R + +KA ++
Sbjct: 157 RSIRTQLRTQEGRVRDRLASLTRGSSA----AKMLSDTIITIRNDRFVIPVKAEYRSHY- 211
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
G+ + S+SG T ++EP V+ NN L E AE IL L+A++ + + L
Sbjct: 212 GGVIHDQSASGQTLYIEPDAVVQANNEIQGLKVKEKAEVDRILMELSAKVQEVAHSLFVL 271
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ + EID+ A+A + Q P ++ + ++ + +HPLL
Sbjct: 272 VQILGEIDVVLAKAKYGQAHKCTMPKMNDRGYMKLTKA------RHPLL----------- 314
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
DV D V DI+ + +VITGPNTGGKT ++KT+
Sbjct: 315 ---------DV---------------DTAVANDIEFGDDVTAIVITGPNTGGKTVTLKTI 350
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL +LM++AGL +PA + L F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 351 GLCTLMAQAGLPVPALDGSELAVFTQLFADIGDEQSIEQSLSTFSSHMVNIVDILNEFDH 410
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
+SLVL DE+G+GTDP EG ALA SIL + R + TTHY +L NA+
Sbjct: 411 DSLVLFDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVVNASM 470
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
EF+++TL PTYR+L G G SNA I+K +G II+ A+ + H +
Sbjct: 471 EFNVDTLSPTYRLLIGVPGRSNAFEISKRLGLPDNIIETAKSYT-----GTETHEVESMI 525
Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
SL RR+ E A +A L AE L +++ + + + L K ++ ++ + A
Sbjct: 526 ASLETSRRQAEKDAEESARLLAESNALRADLDAKIAEYEATKDELAKKAKEKARKIVAEA 585
Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR--------PDDDF--SVS 661
K + ++++ + A N +KE E I++A + P++
Sbjct: 586 KQEAESIIDELHKMQHRA-----NQAVKEHE-----IIDARKRLESAAPAPENRILKKQR 635
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
+ N + T Q G++V V S G + T+++ + VQ G +++++ + ++ I K
Sbjct: 636 QLNARAQTLQVGDEVKVLSYGQR-GTLLKKDKSGEW-HVQIGILKMKLPEEDLEYIKPEK 693
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL--- 778
K+ N ++ R Q K LDLRG R E+A H+
Sbjct: 694 VKDTVNV----------------------STVRNRSQAVKLELDLRGERYEDAMHRTEKY 731
Query: 779 --DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 834
D LA + S +IHG GTG ++E + ++L+ HPRV Y + YG TV
Sbjct: 732 LDDALLANYHQVS---IIHGKGTGALREGIQQLLKRHPRVKNYHYGNANEGGYGVTVVEF 788
Query: 835 K 835
K
Sbjct: 789 K 789
>gi|23099579|ref|NP_693045.1| DNA mismatch repair protein [Oceanobacillus iheyensis HTE831]
gi|81746034|sp|Q8EPI1.1|MUTS2_OCEIH RecName: Full=MutS2 protein
gi|22777809|dbj|BAC14080.1| DNA mismatch repair protein [Oceanobacillus iheyensis HTE831]
Length = 782
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 246/823 (29%), Positives = 402/823 (48%), Gaps = 122/823 (14%)
Query: 16 SLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SL++ L ++T A +++ +Q + L I DI + + G +LS E V TL
Sbjct: 39 SLDKINMLQDETDEAAKIIRLNQAIPLGGITDIRASVKRSSIGGILSTDECLDVANTLYG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
NV + ELD P+L EL+++ + ELE+ I CID I +D AS
Sbjct: 99 SRNVKNTIENMEELD-------IPILKELVEHITPIRELEQAIKSCIDDHGHI-MDGASS 150
Query: 134 DLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR+ R E L++ + + + A +IT R R + +K ++
Sbjct: 151 QLRSIRSSIRTLESRIREKLENYTRSNSKMLSDA------IITIRNDRYVLPVKQEYRGA 204
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+ GI + S+SG T FMEPK V+ NN + E E IL L+ ++A E+++
Sbjct: 205 I-GGIVHDQSASGQTLFMEPKAVVDINNSLHESKSKEQLEIERILKDLSNQVASYEQDLL 263
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + ID +AR AQ M P ++ + ++ + +HP++
Sbjct: 264 ENVKVLTNIDFIYARGKLAQAMKASRPKMNDEGYMKMQQA------RHPMI--------- 308
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P+ V N DI+ E +VITGPNTGGKT ++K
Sbjct: 309 -------PIDEVVAN-------------------DIEFGREYTSIVITGPNTGGKTVTLK 342
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
+GL +LM+++GL +PA + +P FD + ADIGD QS+EQNLSTFS H++ IVDI++ +
Sbjct: 343 LVGLCTLMAQSGLQVPALDGCEMPVFDEVFADIGDEQSIEQNLSTFSSHMTNIVDIMKKI 402
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ SLVL DE+GSGTDP EG ALA +IL + + + TTHY +L + NA
Sbjct: 403 TDRSLVLFDELGSGTDPQEGAALAMAILDEVISKQARVIATTHYPELKAYGYNREQVVNA 462
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF++ETL+PTYR+L G G SNA +I+ +G +R I+RA+ L+ + + ++ +
Sbjct: 463 SVEFNVETLKPTYRLLIGVPGRSNAFDISTRLGLERATIERAKSLI-GVDSKSVENMIAS 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
L +S +E + E A + E L +E E +++ L K ++ ++ +
Sbjct: 522 LEKSHLEAEQDYEQ----AHDVLLESEKLRNALEHEWNLFEQKKEKLYKKAEEKAEKAIQ 577
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET---NTS 666
A+ + +T+V + Q++D++ +KE E +EA + D+ + T N
Sbjct: 578 KAREEAETIVSEM-RQMKDSAG------LKEHE-----WIEARKMLDEAKPNLTKNGNQK 625
Query: 667 SFTP--------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
P Q G+++ + ++ +++ V+E D + LVQ G M+V+VK+ ++ I
Sbjct: 626 QVDPKPVEDRQLQPGDEIKLLTV-NQMGEVLERVSDKE-YLVQVGIMKVKVKRKDLELIR 683
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
K+K +P ++ SN S LDLRG R E+A +L
Sbjct: 684 KPKKKQ-VDPVTTIK------------GSNYHVS---------TELDLRGERYEDAILRL 721
Query: 779 -----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
D+ LA + S +IHG GTG +++ V E + HPR+
Sbjct: 722 EKYVDDVLLAGYPKAS---IIHGKGTGALRKGVQEFVGRHPRI 761
>gi|123967774|ref|YP_001008632.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. AS9601]
gi|123197884|gb|ABM69525.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. AS9601]
Length = 803
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 253/857 (29%), Positives = 414/857 (48%), Gaps = 116/857 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
MG + IP E S++LLN+T + ++ + + S + DI+ + G
Sbjct: 41 MGKQSILSFVIP--SEYEASKRLLNETVEINELEKNLDKSISFSGVFDISRNIEICSKGG 98
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
+++ SE+ + +T+ A N+ K L LD + S + L+ + N T K G
Sbjct: 99 VITSSELLEIAKTIAAARNLKKIL-----LDFEQRPYISSFTKNLIDHQNIETIF--KKG 151
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
+ + I D AS +L ++R E L KK+ +I I K L
Sbjct: 152 IESNGR---ISDNASNELSILRKE---------FLSKKLERKILVEKFIQKNLAYLQDTT 199
Query: 171 ITKRRSRMCVGIKASH--KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
I R R + +K ++ K+ GI + SSSG T + EP+ V N L A
Sbjct: 200 IGDRYGRPVLAVKVNYVDKF---KGIIHDSSSSGNTVYFEPESVVTKGNKIASLEARITA 256
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
EE +L + ++ + + + + +L ++ A R+ +++W+ G P +S
Sbjct: 257 EEFKLLKKWSHVVSDNSKNLIEMASILLRLENALTRSRYSKWIGGKTPTFEKNPIIS--- 313
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
+ G HPLL+ + KG PV +D +
Sbjct: 314 ---LIGFSHPLLIWEHKK---------------------------KGAPP-PVAVDFYIN 342
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSL
Sbjct: 343 RNIKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSL 402
Query: 409 EQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
E+NLSTFSGHISRI IL+ + + S+VL+DEIGSGTDP EG ALA ++L+ ++
Sbjct: 403 EENLSTFSGHISRIKGILDSLDYKKGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSD 462
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ + TTHY D+ LK D+RFEN + F E+L+P Y + WG G SNAL+I+K IG D
Sbjct: 463 ITLATTHYGDIKALKYNDSRFENVSVAFDEESLKPKYILNWGIPGRSNALSISKRIGLDE 522
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
I+ A L+P+ + S + + L EER K ++ A AA L A L+ E++
Sbjct: 523 SILNEA---ANYLKPKEVDNINS-IIKGLEEERIKQQNSAEAAAELIARTEILHDELKRN 578
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKE 640
+ A ++ E ++ + + AK + V D +LRD + + I +KE
Sbjct: 579 YEHQKINAQKIQELERSKLSKHIISAKKE----VIDLIKKLRDKNVNGEDTRIIGKRLKE 634
Query: 641 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
E+ ++ + + S+ PQ G+ V +KSL + +V++ V
Sbjct: 635 IETEHLTQKKSEK-----------SISWNPQVGDFVKIKSL-NSTGQIVDLDKKGGFYEV 682
Query: 701 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 760
+ G R + N+ I N P ++ K + ++ E+ S+ +++TS
Sbjct: 683 KCGSFRSTLSANDFEGI------NGEKPNFKMSKIE-------IKATREDFSFS-KIRTS 728
Query: 761 KNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
KN++D+RG+RV EA ++ + + L+++HG+GTG +K+ + L V K E
Sbjct: 729 KNTIDVRGLRVHEAEIIIEEKIRRF--HGPLWIVHGIGTGKLKKGLRNWLSGLNYVDKIE 786
Query: 821 Q--ESPMNYGCTVAYIK 835
+ GC++A+IK
Sbjct: 787 DAANNEGGPGCSIAWIK 803
>gi|313896601|ref|ZP_07830150.1| recombination and DNA strand exchange inhibitor protein
[Selenomonas sp. oral taxon 137 str. F0430]
gi|312974786|gb|EFR40252.1| recombination and DNA strand exchange inhibitor protein
[Selenomonas sp. oral taxon 137 str. F0430]
Length = 761
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 248/828 (29%), Positives = 386/828 (46%), Gaps = 101/828 (12%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L +T+ A++++Q Q I D+ L A G L E+ + T++ + NV K
Sbjct: 21 RLHAETAEAVSVLQMQAPPFGGIYDLRHTLQKATLGSTLEVEELREIMSTMQGMRNV-KY 79
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
A+L L+ +E+L LE+ + ID + + D AS +L + E
Sbjct: 80 FFRDADLSLPLLKEKGVRIEILGM------LEKHLQNTID-EHGNLRDDASPELRRVTRE 132
Query: 142 ----RKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ R E L ++L A Q FQ + ++T R R + +K ++ P G+
Sbjct: 133 MLSAQNRVKERLSTILHDAAYQKCFQ-----EAIVTVRAERYVIPVKQEYRAQFP-GVIH 186
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP VE NN ++ + E IL L+ EIA++ + +
Sbjct: 187 DRSASGATLFVEPLATVELNNTVRQMELAREQEIRRILQQLSQEIARAADIVSENCTILA 246
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+DL FARAG ++ M+ P + +V + +HPLL
Sbjct: 247 ELDLIFARAGLSRNMEAYAPTFNRAGYVRLQRA------RHPLL---------------- 284
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P D VPIDI++ + V++ITGPNTGGKT SMKTLG+ +L
Sbjct: 285 P-------------------KDRVVPIDIELGRDFSVLLITGPNTGGKTVSMKTLGILAL 325
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++G +LP + LP + I ADIGD QS+EQ+LSTFS H IV IL+ LVL
Sbjct: 326 MAQSGCFLPTASGAELPVYGSIYADIGDEQSIEQSLSTFSAHTKNIVRILQKAKSNDLVL 385
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP EG ALA SI+++L R + TTHYA L NA+ EF
Sbjct: 386 LDEVGAGTDPDEGAALARSIIEHLLQRRISVIATTHYAALKTYAYGRQGVMNASVEFDTS 445
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLM 555
TLRPTYR+L G+ G SNA +I++ +G I+ RAQ+ ++ + H + E + L
Sbjct: 446 TLRPTYRLLIGTPGASNAFSISRRLGLADAIVARAQRYID------EDHVRFETVVNELE 499
Query: 556 EERRKLE---SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
+E+R E ++ R A + + + R D+ R+ H +E + +E A+
Sbjct: 500 QEKRAYETRQTELRIRAQKISAMEEQLRTERDKFIQAHRKLLHKAREEANGIVRE---AR 556
Query: 613 VQIDTVVQDFENQLRDASADEINSLIKES-ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ 671
+ ++ + Q D E I+E+ E A + P + P
Sbjct: 557 RSAEETIKKLKQQFDDHGVKERRKAIQEARERLTGAYMPQRHPSATKVGQKIRAGEIEP- 615
Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
G+ VH+ L + TV+ V G + T VQ G +R VK + + K
Sbjct: 616 -GDIVHITRLAQE-GTVLAVQGKELT--VQIGALRTVVKPDECTFVSRKK---------- 661
Query: 732 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRS 789
K + G G +++A+ RV + +D+RGM V E L I A + S
Sbjct: 662 --KNHRTEKVGFTGGISQKAA---RVHS---QIDVRGMTVSEVELTLGKFIDDAVFAGLS 713
Query: 790 VLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
+ +IHG GTG ++ + + L+ HP V + S G +VA +K
Sbjct: 714 KILIIHGKGTGALRLGIQDYLKRHPSVLSVAFADISEGGSGASVAELK 761
>gi|261408901|ref|YP_003245142.1| MutS2 family protein [Paenibacillus sp. Y412MC10]
gi|261285364|gb|ACX67335.1| MutS2 family protein [Paenibacillus sp. Y412MC10]
Length = 789
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 250/844 (29%), Positives = 407/844 (48%), Gaps = 119/844 (14%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE + LL T A + ++ P I DI L A G L+P E+ A T+
Sbjct: 40 LEAVKDLLAATDQAYTVDRLKGNP-SFRGITDINDALKRARIGGTLNPHELLATSNTIHG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ K+ A D ++ L L + LE+ I CID + +LD AS +
Sbjct: 99 SRRI-KRFIAAIHED----EKIDILFNLSDLISEQKPLEDAIRLCID-ETAEVLDSASAE 152
Query: 135 LELIRAERK----RNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR E + R E L+S+++ + A++ Q LIT R R + +KA ++
Sbjct: 153 LSQIRRELRGGEVRIREKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAEYRSH 207
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S SGAT F+EP+ V NN E E IL LTA++ + +
Sbjct: 208 F-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRMREEREIEVILQKLTAQVGEQAELLS 266
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+D + ++D FA+A A M P ++ + ++ +HPL+
Sbjct: 267 IDVDLIGQLDFIFAKARLAHVMKASLPRMNDRGYIKLRRG------RHPLI--------- 311
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P +D VP+D+++ +++TGPNTGGKT ++K
Sbjct: 312 -------P-------------------TDQVVPLDVELGNSYTSIIVTGPNTGGKTVTLK 345
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +LM+ +GL++PA+ ++ FD I ADIGD QS+EQ+LSTFS H++ I+ IL +
Sbjct: 346 TIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRILSQM 405
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFEN 488
+ +SLVL+DE+G+GTDP+EG ALA SIL+++ R+G ++ TTHY++L + N
Sbjct: 406 TPKSLVLLDEVGAGTDPAEGSALAISILEHIH-RMGCRMIATTHYSELKAYAYERKGVIN 464
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF + TL PTYR+L G G SNA IA+ +G I++ A+ V + + R
Sbjct: 465 ASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEEDQRVE 519
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
+ SL E R E + A + E+ +L + + E + L+ + L K + +Q +
Sbjct: 520 HMIASLEENRHTAEVEREKAEQVRKEMEELRQRHQQELQKLEEQKDKLVDKARAEARQIV 579
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS-- 666
+ A+ + + ++ D LR + +E S +KE + ++ A + DD + +
Sbjct: 580 DKARSEAEEIIAD----LRKIAQEEGAS-VKEHK-----LIAARKRLDDAEPQQGKKTGG 629
Query: 667 --------SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
S P G++V V SL K VVE+ G + V VQ G M+++V +++ +
Sbjct: 630 QRSAKQQRSIEP--GDEVRVYSLNQK-GHVVEMSGSKEAV-VQLGIMKMKVALDDLELLS 685
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
N P +Q +Q + +A+ +N LDLRG +EEA ++
Sbjct: 686 N----------PAANAKQAPKQHATVLKRTRDANI-------RNELDLRGANLEEALIEV 728
Query: 779 D--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY-----GCTV 831
D I A + +++IHG GTG+++ + + LR H V + NY G T+
Sbjct: 729 DRFIDEAFLGNLGQIYIIHGKGTGILRTGIQDYLRKHKHVKSHRLG---NYGEGGNGVTI 785
Query: 832 AYIK 835
A +K
Sbjct: 786 AELK 789
>gi|414160430|ref|ZP_11416698.1| MutS2 protein [Staphylococcus simulans ACS-120-V-Sch1]
gi|410878328|gb|EKS26213.1| MutS2 protein [Staphylococcus simulans ACS-120-V-Sch1]
Length = 782
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 240/810 (29%), Positives = 397/810 (49%), Gaps = 107/810 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R ++ V N +K L+ + Y L
Sbjct: 65 LSGLSKVSPLIHRAKIGSMLNVRELNQIKRLIQ-VQNQYKTFYSQL-LEEEEAINYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + L++L ++I C + D AS +L+ IR+ +R +NLD ++K
Sbjct: 123 ERMTQLPILSDLYQEIKQ--KCDAYDLFDDASYELQSIRSRIHSTSQRIKQNLDRVVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ Q + +IT R R + +KA ++ +GI + SSSG T ++EP VE N
Sbjct: 181 SNQ----KKLSDLIITVRNDRHVIPVKAEYRQDF-NGIVHDQSSSGQTLYIEPSAVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E AE IL+ LT E+A E + + + V+ +ID A+A + + G
Sbjct: 236 NKISRLRNDEKAEVERILTELTLEVA-GEADACLIAESVMGQIDFLTAKARYGSSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + + V + HPLL +P K+ V N+ V +
Sbjct: 295 PEFTEERKVYLPKAF------HPLL---------------DP-KTVVANTIEFVDGI--- 329
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 330 ----------------QTVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSKLGVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
D + DIGD QS+EQ+LSTFS H+ IV+IL+ S++L DE+G+GTDPSEG ALA S
Sbjct: 374 DNVYCDIGDEQSIEQSLSTFSSHMKNIVEILKHADHNSVILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++ R L + TTHY +L NA+ EF + TL PTY++L G G SNA
Sbjct: 434 ILDNVQKRGALVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+ +G + KII+ A+ ++ + + + + SL + +++++Q L E
Sbjct: 494 EISSKLGLNGKIIRDAKAMI-----GQDEQEINNMIASLEKNTKRVDNQRIELEQLLREA 548
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
DL+R++ + L + + Q + A + + ++ D QLR DE N
Sbjct: 549 QDLHRQLSQKYDQYQNYEKQLMDEAKTKANQRVKVATKEAEEIISDL-RQLR----DEKN 603
Query: 636 SLIKESESAIAAIVEAHRP-DDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVV 689
+ +KE E ++E + D+ + ++ + ++ G++V V + G K V+
Sbjct: 604 ADVKEHE-----LIEKRKHLDEQYEATDLKQNVKKKKWDEIKAGDEVKVLTYGQK-GEVL 657
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
E+ DD+ +VQ G +++++ PI + ++K +K QE Q+ SN
Sbjct: 658 EIL-DDEEAVVQMGIIKMKL------PIADLEKK---------QKTQEP-QTKMVSRSNR 700
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 807
K LDLRG R +EA LD L A + +++IHG GTG +++ V
Sbjct: 701 SP--------VKMELDLRGYRYDEAVTALDQYLDQAMLSNYENVYIIHGKGTGALQKAVQ 752
Query: 808 EILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H +A Y +P +G TVA +K
Sbjct: 753 QHLKRHKNIASYRTGTPSEGGFGVTVATLK 782
>gi|403668407|ref|ZP_10933682.1| MutS2 protein [Kurthia sp. JC8E]
Length = 789
Score = 285 bits (728), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 244/835 (29%), Positives = 396/835 (47%), Gaps = 100/835 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+LEE Q LL + L++++ + + + I DI A G +LSP E+ + T+RA
Sbjct: 40 TLEEVQSLLEEMDEGLSILRIKGSVPMGGIFDIRPHARRAQIGGILSPKELMEISSTIRA 99
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKN-CNFLTELEEKIGFCIDCKLLIILDRASE 133
+ ++++ E E D + PL K LT L+ +I CID + +D AS+
Sbjct: 100 -SRIFREFIEVIEADNEI---EIPLFIAKKEELPILTGLQHEINSCIDDNAKV-MDSASQ 154
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R + L SL + AA A + +IT R R + +KA ++
Sbjct: 155 ALRGIRTQLRTQEGRVRDRLASLTRGSAA----AKMLSDSIITLRNDRFVIPVKAEYRSH 210
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
G+ + S+SG T ++EP V+ NN L E AE IL L++++ + +
Sbjct: 211 Y-GGVIHDQSASGQTLYIEPDAVVQANNEIQNLKVKEKAEIDRILLELSSKVQEVAHSLF 269
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
L+ + ID+ A+A + Q PI++ + ++ + +HPLL
Sbjct: 270 VLVQILAAIDVVLAKAKYGQANKCTMPIMNDRGYMKLTKA------RHPLL--------- 314
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
D E + V DI+ + +V+TGPNTGGKT S+K
Sbjct: 315 -----------DAETA---------------VANDIEFGDDITTIVVTGPNTGGKTVSLK 348
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +LM++AGL +PA + L F + ADIGD QS+EQ+LSTFS H+ IV+IL+
Sbjct: 349 TIGLCTLMAQAGLPIPALDGSELSVFTQLFADIGDEQSIEQSLSTFSSHMVNIVEILKQF 408
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL DE+G+GTDP EG ALA SIL + R + TTHY +L NA
Sbjct: 409 DDRSLVLFDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVINA 468
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF+++TL PTYR+L G G SNA I+K +G II+ ++ + H
Sbjct: 469 SMEFNVDTLSPTYRLLIGVPGRSNAFEISKRLGLPEHIIEASKAFT-----GTETHEVES 523
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL R + E A A L E +L +++ + + + + L+ K ++ ++ +
Sbjct: 524 MIASLETSRLEAEKDAEETARLLEEANELRADLDAQMAEYEAKKETLENKAKEKARKIVE 583
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSV----SETN 664
AK + + V+ + A N +KE E A +E P + + + N
Sbjct: 584 EAKREAEEVIDELHKMQHRA-----NKAVKEHEIIDARKRLEGAAPAQENRILKKQRQQN 638
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
+ + G++V V S G + T+++ D V VQ G +++++ +++++ I K K+
Sbjct: 639 ARAKQLRVGDEVKVLSYGQR-GTLIDRDKTGDWV-VQIGILKMKLPEDDLQYIKPEKTKD 696
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
+ ++ R Q K LDLRG R E+A H+ + L
Sbjct: 697 TVSV----------------------STVRNRSQAVKLELDLRGERYEDAMHRTEKYLDD 734
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
A + + +IHG GTG ++E + ++L+ HPRV Y S YG T+ K
Sbjct: 735 ALLSNYHQVSIIHGKGTGALREGIQQLLKRHPRVKGYHFGSASEGGYGVTIVEFK 789
>gi|392423579|ref|YP_006464573.1| MutS2 family protein [Desulfosporosinus acidiphilus SJ4]
gi|391353542|gb|AFM39241.1| MutS2 family protein [Desulfosporosinus acidiphilus SJ4]
Length = 788
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 237/831 (28%), Positives = 399/831 (48%), Gaps = 98/831 (11%)
Query: 18 EESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
EE L +T +++ PL + ++I L + G ++ E+ +R TL+
Sbjct: 43 EEVHFGLQETDEGKNLIRGNPLFSVRGAKEIRPYLERCLLGGVIHGEELLEIRDTLQ--- 99
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASED 134
V ++L + + +S + + L E+ + LE++I CI D K + D AS +
Sbjct: 100 -VGRRLKQFFQ---ESQEEFPRLWEVSLSIEPQKALEDEISRCIAEDGK---VADNASPE 152
Query: 135 L-ELIRA---ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L EL RA + R E+L+ L+ A Q + P+IT+R R + IK ++
Sbjct: 153 LAELRRAIYRLQNRIRESLEGTLRNPAYQKM----LQDPIITQRSDRYVIPIKQEYRGAF 208
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P GI + S+SGAT F+EP V+ N + E E IL +L+A++ +
Sbjct: 209 P-GIVHDQSASGATLFIEPMPVVQLGNELREVVLKEQREVQRILQMLSAQVETRAETVAD 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
L + + ++D A+A + M+ P L + + + +HPL+ G
Sbjct: 268 LHEALAKLDFVLAKANLSVSMNAGAPELVEKQQLKLIQA------RHPLIGGKV------ 315
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
VP+ +++ +VITGPNTGGKT ++K
Sbjct: 316 ------------------------------VPLSVELGIGFDTLVITGPNTGGKTVALKV 345
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL + M+++GL++PA+++ + F I ADIGD QS+EQ+LSTFSGH+ IV+I++
Sbjct: 346 IGLMAAMTQSGLHIPAESNSSMGVFSQIFADIGDEQSVEQSLSTFSGHMKNIVEIIDRSD 405
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL+DE+G+GTDP+EG ALA IL L R V TTHY L + R +NA+
Sbjct: 406 ERSLVLLDEVGAGTDPTEGAALAMGILAELHSRGCRTVSTTHYGALKTFAYETPRVKNAS 465
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ETLRPTYR+L G G SNA IA+ +G +++RA V ER+ ++L
Sbjct: 466 VEFDTETLRPTYRLLIGIPGKSNAFTIARRLGLSEGVLERANTFV----TEREMQ-VADL 520
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
++L E R++E + S + + +E++++ LD L ++ + +
Sbjct: 521 IENLGETHREIELEKEKVQSGRQAVEQQTKALEEKSQRLDEDYDLLMTLAKEEAAELVRE 580
Query: 611 AKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
AK + + ++ + + L+ + + + I+++ I +++ D +V +T +
Sbjct: 581 AKREAEAIIAELKEALKKETKQQQD--IEKARQGFRRI--SNKLDKGRAVKQTGSGLSAD 636
Query: 671 Q--FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
Q G+ V + L K V+++P VLVQ G M+V V ++ + R+ +P
Sbjct: 637 QIMLGQTVLMTKLRQK-GQVLKLPNASGEVLVQAGIMKVMVPLAELKLV----REEKVSP 691
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
+ R+ S G + + + +DLRGM VEE + LD L A
Sbjct: 692 P------KSSRKGNSLGLQ--------KAEEIRAEIDLRGMLVEEGTEVLDKFLDDAVLG 737
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+++VIHG GTG ++ + + LR HP V + + + G TV +K
Sbjct: 738 GIGLVYVIHGKGTGAMRAGIQDFLRGHPHVRSFRLGEYGEGDSGVTVVELK 788
>gi|307244041|ref|ZP_07526160.1| putative recombination and DNA strand exchange inhibitor protein
[Peptostreptococcus stomatis DSM 17678]
gi|306492565|gb|EFM64599.1| putative recombination and DNA strand exchange inhibitor protein
[Peptostreptococcus stomatis DSM 17678]
Length = 807
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 251/846 (29%), Positives = 410/846 (48%), Gaps = 94/846 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQL 59
+G ++++K + P + EE + +T+ A +++ ++ + L I DI A G +
Sbjct: 26 LGLSMIEKLR-PMS-TFEEVKTAQEETTEAQSILINRGHVPLEGIHDIGDKAKRADLGAV 83
Query: 60 LSPSEICAVRRTLRA---VNNVW----KKLT---EAAELDGDSLQRYSPLLELLKNCNFL 109
L P + + T+RA ++NV KK T +D + + P+++ L ++
Sbjct: 84 LEPKSLLDLADTMRATRVLSNVLSGQIKKETFGNSETSIDEEDDEIKYPIIQSLATSLYI 143
Query: 110 -TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
++EE+I I +L I D AS +L IR + +++ S L + + +
Sbjct: 144 HKDIEEEIFNAIISELEI-ADSASPELRSIRRRILQKNQSIRSKLNGIISSTTYQKYLQD 202
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
+I+ R R V +KA ++ ++ GI + SSSGAT F+EP VE NN +L E
Sbjct: 203 AIISMRGDRFVVPVKAEYRSMMA-GIIHDQSSSGATLFIEPMTIVEMNNDLRQLKLQEKE 261
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+A + + RE+ + + ++D AFA+ + M P L+ D
Sbjct: 262 EIEKILANLSAMVGQVSRELLSNQEILAKLDFAFAKGKLSIDMKATEPDLNQ------DR 315
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
+ I G +HPLL KS V N DI +
Sbjct: 316 LVRIVGGRHPLL----------------DRKSVVAN-------------------DIILG 340
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ ++ITGPNTGGKT ++KTLGL +LM++ GL+L A + FD I ADIGD QS+
Sbjct: 341 GDYSTLLITGPNTGGKTVTIKTLGLFALMTQCGLHLSANYGTSMCIFDQIFADIGDDQSI 400
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQNLSTFS H++RIVDI+E V+ +SLV+ DE+G+GTDP EG ALA +IL+ +R +
Sbjct: 401 EQNLSTFSSHMTRIVDIVERVTDQSLVIFDELGAGTDPEEGAALAIAILENIRSSGASCI 460
Query: 469 VTTHYADLS--CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
TTHY++L L KD ENAA EF + TL PTYR+L G G SNA I++ +G
Sbjct: 461 ATTHYSELKKYALAKKDV--ENAAVEFDMGTLSPTYRLLIGVPGKSNAFEISRKLGLGEH 518
Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
II +A+ + E + E+ Q++ + R K + + A EI D+ + + +
Sbjct: 519 IIDQAKNFLTNEDIEIE-----EVLQNVEKSRLKTQEELERAERYRQEIEDIKLDYQAKL 573
Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
+ LD+ A + Q + AK D ++++ R + E + ++E I
Sbjct: 574 EKLDKSKAKVLENARSQAFSIVRQAKEDTDAMIKEIRKTDRLKDSREKDRRLEEIRKKIG 633
Query: 647 AIVEAHRPDDDFSVSETNTSS--FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
+ +P + V S T + G V++ +L TV+ +VQ G
Sbjct: 634 QSMGKFQPSVESMVVPKYASKEIKTLKPGTDVNIITLRQD-GTVISADDKKKEAIVQVGI 692
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
M++ + +++ I K N + +Q + +SGS + +
Sbjct: 693 MKMSLPYKSLKLIA----KKEKNTVTKTTRQVINSKSGSV----------------ERKV 732
Query: 765 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRGM +EEA+ ++ L AC + +IHG+GTG++K+ + E+L+ +P V +
Sbjct: 733 DLRGMNLEEATMAVEKYLDDACMAGHEEVTIIHGIGTGILKKGMTELLKKNPHV---KST 789
Query: 823 SPMNYG 828
P YG
Sbjct: 790 RPGQYG 795
>gi|52081359|ref|YP_080150.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|404490236|ref|YP_006714342.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|81690944|sp|Q65GE2.1|MUTS2_BACLD RecName: Full=MutS2 protein
gi|52004570|gb|AAU24512.1| DNA mismatch repair protein MutSB [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52349238|gb|AAU41872.1| DNA mismatch repair protein MutS [Bacillus licheniformis DSM 13 =
ATCC 14580]
Length = 785
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 253/838 (30%), Positives = 408/838 (48%), Gaps = 107/838 (12%)
Query: 15 KSLEESQKL---LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
+SLEE +KL +++ L + S P + DI L A G +LSP+E+ +
Sbjct: 38 RSLEEVKKLQEEVDEAGTVLRLKGSAPF--GGLTDIRKALRRAEIGSILSPAELTEISGL 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
L A + K E DG + E L L+ELE I CID + LD A
Sbjct: 96 LYAAKQM-KHFLEGLFEDGVEIPYLHQYAEKLIP---LSELERDINSCIDDHGEV-LDHA 150
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
SE L IR + + R + L+S+L+ +AQ + +IT R R + +K ++
Sbjct: 151 SETLRGIRTQLRTLESRIRDRLESMLRSSSAQKM----LSDTIITIRNDRFVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + SSSGAT F+EP+ V+ NN + +E E IL +LT + A+ E
Sbjct: 207 SSY-GGIVHDQSSSGATLFIEPQAIVDMNNALRQAKVNEKQEIERILRVLTEKTAEHTNE 265
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + + + +D FA+A +A+ V P +++ +V + +HPLL
Sbjct: 266 LFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYVRLIQA------RHPLL------- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
PL D VP DI++ E +VITGPNTGGKT +
Sbjct: 313 ---------PL-------------------DEVVPNDIELGGEYTTIVITGPNTGGKTVT 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGL ++M+++GL++PA+ FD + ADIGD QS+EQ+LSTFS H+ IVDIL+
Sbjct: 345 LKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILK 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
++ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L
Sbjct: 405 DMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTGARVIATTHYPELKAYGYNRENVI 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ++TL PTY++L G G SNA I+K +G +I RA + + +
Sbjct: 465 NASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLPDYLIGRA-----KAEMTAEHNEV 519
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+ SL + +++ E++ + ++ AE L+R+++ + + + L + Q+ ++
Sbjct: 520 DTMIASLEDSKKRAEAELKETEAIRAEAEALHRDLQQQISEWQEKKDKLYEEAEQKAAEK 579
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETN 664
+ A + D ++Q D A + + LI K E A+ + +A +P + +T+
Sbjct: 580 VKAAMKEADDIIQSLRMIKEDHKAFKDHELIEAKKRLEEAVPSFEKAKKP----AQKKTD 635
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P G++V V + G K T++E G + VQ G ++++VK+ ++ + K+
Sbjct: 636 KRELKP--GDEVKVLTFGQK-GTLLEKTGAAEWN-VQIGILKMKVKEKDLEFL-----KS 686
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----D 779
A P ++Q A A G S LDLRG R E A H++ D
Sbjct: 687 APEP---------EKQKTIA------AVKGKDYHVSLE-LDLRGERFENALHRVEKYLDD 730
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L++H V +++ + G T+ +K
Sbjct: 731 AVLAGYPRVS---IIHGKGTGALRKGVQDLLKSHRNVKNSRFGEAGEGGSGVTIVELK 785
>gi|359411145|ref|ZP_09203610.1| MutS2 protein [Clostridium sp. DL-VIII]
gi|357170029|gb|EHI98203.1| MutS2 protein [Clostridium sp. DL-VIII]
Length = 786
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 246/836 (29%), Positives = 413/836 (49%), Gaps = 113/836 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G ++ K + P+ E + KL A ++ L L + D + A G LS
Sbjct: 27 GKELINKLE-PYNNLYEINNKLEETNEALEILITKGNLPLEGLSDTHEGIERAKKGGTLS 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
P ++ V LRA + K+ + E++ + Y L +L + LE +I I
Sbjct: 86 PEQLLRVGGMLRA-SRTTKEFFKREEVE----KAYPRLEDLAFILVPIKTLEAEIERAIV 140
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMC 179
+ I D+AS+ L IR R ++ +S +++ + I ++ + L T R R
Sbjct: 141 SEDEIS-DKASQTLYNIR----RTLKEKNSSVREKISSIVKSNSKYLQDDLYTMRGDRYV 195
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +K+ +K +P G+ + SS+GAT+F+EP V NN L E AE ILS L+
Sbjct: 196 LPVKSEYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIERILSELSQ 254
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
++ + + + ++E+D FA+A +A ++ + PI V+ D + +I +HPL
Sbjct: 255 KVKMNAEQCLSNLKVLVELDFIFAKAKYASALNAIKPI------VNEDGTFSILSGRHPL 308
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ G D VP D+ + E + ++ITGP
Sbjct: 309 IEG-----------------------------------DKVVPSDVYLGKEFQTLMITGP 333
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KT+GL +M +GL +PA+++ + F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 334 NTGGKTVTIKTVGLLHIMGLSGLLIPARDNSSIALFNEIFADIGDEQSIEQSLSTFSSHM 393
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ IV+I++ V +SL L DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L
Sbjct: 394 TNIVNIMKHVDDKSLALFDELGAGTDPAEGAALAVSILETLRSRGAKLIATTHYSELKAY 453
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ER 537
K ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I+RA++ + E
Sbjct: 454 ALKTDGVENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKEYMSEEN 513
Query: 538 LRPE---RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
L+ E R+ KS + + E R L+ QA + E + E D R A
Sbjct: 514 LQFENLIRELQEKSIIAKQEAREARMLKEQAEELKKKYEEKL--------EKLDNTREKA 565
Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFE--NQLRDASA-----DEINSLIKESESAIAA 647
++ A+ ++ ++ ++ AK + D +++ +L +S +E +K+S A
Sbjct: 566 YMDAR--REAKEIISNAKDEADEILKAMRELEKLGISSGGRQRLEEERKKLKDSLEAKEK 623
Query: 648 IVEAHRPDDDFSVSETN--TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
+ + ++ ++++ + +F P +QV V SL P + V V+ G M
Sbjct: 624 GIHNMKENEGEAITKVSLGMEAFLPSLNQQVIVTSL----------PDNKGEVQVEAGIM 673
Query: 706 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 765
++ VK +++ RK ++RK++E + + S+ S +D
Sbjct: 674 KINVKLSDL-------RKTKVTKEEKVRKKREVKLNLSSVESR---------------VD 711
Query: 766 LRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
LRGM EEA ++ D L A + + ++HG GTGV+++ + ++L+ HP V Y
Sbjct: 712 LRGMDAEEACYKADKYLDDAYRANLGEVTIVHGKGTGVLRKAINDMLKRHPHVKSY 767
>gi|319647266|ref|ZP_08001488.1| MutS2 protein [Bacillus sp. BT1B_CT2]
gi|317390613|gb|EFV71418.1| MutS2 protein [Bacillus sp. BT1B_CT2]
Length = 785
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 253/838 (30%), Positives = 408/838 (48%), Gaps = 107/838 (12%)
Query: 15 KSLEESQKL---LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
+SLEE +KL +++ L + S P + DI L A G +LSP+E+ +
Sbjct: 38 RSLEEVKKLQEEVDEAGTVLRLKGSAPF--GGLTDIRKALRRAEIGSILSPAELTEISGL 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
L A + K E DG + E L L+ELE I CID + LD A
Sbjct: 96 LYAAKQM-KHFLEGLFEDGVEIPYLHQYAEKLIP---LSELERDINSCIDDHGEV-LDHA 150
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
SE L IR + + R + L+S+L+ +AQ + +IT R R + +K ++
Sbjct: 151 SETLRGIRTQLRTLESRIRDRLESMLRSSSAQKM----LSDTIITIRNDRFVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + SSSGAT F+EP+ V+ NN + +E E IL +LT + A+ E
Sbjct: 207 SSY-GGIVHDQSSSGATLFIEPQAIVDMNNALRQAKVNEKQEIERILRVLTEKTAEHTNE 265
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + + + +D FA+A +A+ V P +++ +V + +HPLL
Sbjct: 266 LFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYVRLIQA------RHPLL------- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
PL D VP DI++ E +VITGPNTGGKT +
Sbjct: 313 ---------PL-------------------DEVVPNDIELGGEYTTIVITGPNTGGKTVT 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGL ++M+++GL++PA+ FD + ADIGD QS+EQ+LSTFS H+ IVDIL+
Sbjct: 345 LKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILK 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
++ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L
Sbjct: 405 DMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTGARVIATTHYPELKAYGYNRENVI 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ++TL PTY++L G G SNA I+K +G +I RA + + +
Sbjct: 465 NASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLPDYLIGRA-----KAEMTAEHNEV 519
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+ SL + +++ E++ + ++ AE L+R+++ + + + L + Q+ ++
Sbjct: 520 DTMIASLEDSKKRAEAELKETEAIRAEAEALHRDLQQQISEWQEKKDKLYEEAEQKAAEK 579
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETN 664
+ A + D ++Q D A + + LI K E A+ + +A +P + +T+
Sbjct: 580 VKAAMKEADDIIQSLRMIKEDHKAFKDHELIEAKKRLEEAVPSFEKAKKP----AQKKTD 635
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P G++V V + G K T++E G + VQ G ++++VK+ ++ + K+
Sbjct: 636 KRELKP--GDEVKVLTFGQK-GTLLEKTGAAEWN-VQIGILKMKVKEKDLEFL-----KS 686
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----D 779
A P ++Q A A G S LDLRG R E A H++ D
Sbjct: 687 APEP---------EKQKTIA------AVKGKDYHVSLE-LDLRGERYENALHRVEKYLDD 730
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L++H V +++ + G T+ +K
Sbjct: 731 AVLAGYPRVS---IIHGKGTGALRKGVQDLLKSHRNVKNSRFGEAGEGGSGVTIVELK 785
>gi|167772055|ref|ZP_02444108.1| hypothetical protein ANACOL_03429 [Anaerotruncus colihominis DSM
17241]
gi|167665853|gb|EDS09983.1| MutS2 family protein [Anaerotruncus colihominis DSM 17241]
Length = 793
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 254/818 (31%), Positives = 387/818 (47%), Gaps = 111/818 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSP 98
+ + + + L A G LSP E+ V R LRA+ + W+ ++L+GD
Sbjct: 64 IGGVTNCSAALKRAAVGARLSPRELLDVARVLRAIETIERWR-----SQLEGDPTS---- 114
Query: 99 LLELLKNCNF-LTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLL 153
LE L +C L L+ I I + I D AS L IR+ + E LD L+
Sbjct: 115 -LEFLLDCVVALPSLQRAISTAIVTEDEIA-DAASPALGDIRRKIRSAGAKAREVLDRLV 172
Query: 154 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 213
+ Q + + + +IT+R R V ++ ++ + G+ + S SGAT F+EP G V
Sbjct: 173 RSATYQKY----LQENIITQRDGRFVVPVRQEYRNEI-KGLVHDTSGSGATVFIEPMGVV 227
Query: 214 EFNNMEVR-LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
E NN E+R L E AE IL L+A++ I + ++E+DL FA++ A M
Sbjct: 228 EANN-EIRILQGQEQAEIDRILRELSAQVGACADSIGGSYEAIVELDLYFAKSRLADEMR 286
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
P +S + +HPLL P
Sbjct: 287 ATEPAISETGAAELKRA------RHPLL----------------P--------------- 309
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
+D VPID+++ + +V+TGPNTGGKT ++KTLGL S M++ GL LPA + +
Sbjct: 310 ----ADRVVPIDLRLGGDFDTLVVTGPNTGGKTVAIKTLGLLSAMAQCGLMLPAADGSTV 365
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
P F+ +L DIGD QS+EQ+LSTFS H++ I+ IL+ SLVL+DE+G+GTDP EG AL
Sbjct: 366 PVFEKLLVDIGDEQSIEQSLSTFSAHMTNIIRILDEADGRSLVLLDELGAGTDPVEGAAL 425
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A +I++ LR + V TTHYA++ ENA+ EF + TLRPTYR+L G G S
Sbjct: 426 AVAIIERLRAQGAKVVATTHYAEIKMYALNTPGVENASCEFDVATLRPTYRLLIGVPGRS 485
Query: 513 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
NA I + +G +I+ A+ V E LR E + + Q L R + ESQ R A
Sbjct: 486 NAFAICERLGLPAGVIEAARAHVSGENLRFEEVVSQLEQTRQELERARVQAESQ-RAGAQ 544
Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
+ D R ++ ++ + A ++A+ V+Q A +Q ++ + + R
Sbjct: 545 RERDEADALRRAMEQEREREIERARVQARGI--VEQ----AGMQAQKLLDELDELRRQKD 598
Query: 631 ADEINSLIKESESAIAA-IVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
+ +++SA A + H D V+ N +TP+ G+ V + SLG +
Sbjct: 599 SAGFAERAAQAKSAFKANMRRLHDLAD--PVTRKNIEQYTPERPLKRGDTVRLVSLG-RE 655
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
TV+ P V VQ G ++ +V ++ +R + R G AG
Sbjct: 656 GTVLSAPDGQGFVQVQAGIIKTKVHQSELRLVDTKDRHVTV---------------GGAG 700
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVK 803
S S + K +DLRGM +EA +LD I + + + +IHG GTG ++
Sbjct: 701 VSTRGVSSKAS-RDVKTEVDLRGMTTDEALMELDRFIDASVLSNVPTVTIIHGKGTGALR 759
Query: 804 ERVLEILRNHPRVAKY------EQESPMNYGCTVAYIK 835
V + L+ H V + E ES G TVA +K
Sbjct: 760 AAVQQRLKKHRSVKSFRLGTFGEGES----GVTVAELK 793
>gi|27467755|ref|NP_764392.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis ATCC 12228]
gi|293366874|ref|ZP_06613550.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417656654|ref|ZP_12306337.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU028]
gi|417660105|ref|ZP_12309696.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU045]
gi|417909781|ref|ZP_12553514.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU037]
gi|418603410|ref|ZP_13166795.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU041]
gi|418606840|ref|ZP_13170105.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU057]
gi|418609778|ref|ZP_13172912.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU065]
gi|418628985|ref|ZP_13191501.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU127]
gi|418663768|ref|ZP_13225276.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU081]
gi|419772619|ref|ZP_14298650.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-K]
gi|420202124|ref|ZP_14707719.1| MutS2 family protein [Staphylococcus epidermidis NIHLM018]
gi|420206519|ref|ZP_14712029.1| MutS2 family protein [Staphylococcus epidermidis NIHLM008]
gi|420210956|ref|ZP_14716345.1| MutS2 family protein [Staphylococcus epidermidis NIHLM001]
gi|420219527|ref|ZP_14724543.1| MutS2 family protein [Staphylococcus epidermidis NIH04008]
gi|420222048|ref|ZP_14726973.1| MutS2 family protein [Staphylococcus epidermidis NIH08001]
gi|420224910|ref|ZP_14729748.1| MutS2 family protein [Staphylococcus epidermidis NIH06004]
gi|420229273|ref|ZP_14733979.1| MutS2 family protein [Staphylococcus epidermidis NIH04003]
gi|420231637|ref|ZP_14736282.1| MutS2 family protein [Staphylococcus epidermidis NIH051668]
gi|38604826|sp|Q8CPL6.1|MUTS2_STAES RecName: Full=MutS2 protein
gi|27315299|gb|AAO04434.1|AE016746_224 MutS-like protein [Staphylococcus epidermidis ATCC 12228]
gi|291319175|gb|EFE59545.1| DNA mismatch repair protein MutS [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329734429|gb|EGG70742.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU045]
gi|329736315|gb|EGG72587.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU028]
gi|341652390|gb|EGS76178.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU037]
gi|374406114|gb|EHQ77017.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU065]
gi|374406846|gb|EHQ77724.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU057]
gi|374407579|gb|EHQ78432.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU041]
gi|374411187|gb|EHQ81905.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU081]
gi|374834979|gb|EHR98610.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU127]
gi|383359246|gb|EID36676.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-K]
gi|394270097|gb|EJE14620.1| MutS2 family protein [Staphylococcus epidermidis NIHLM018]
gi|394278358|gb|EJE22675.1| MutS2 family protein [Staphylococcus epidermidis NIHLM008]
gi|394282893|gb|EJE27075.1| MutS2 family protein [Staphylococcus epidermidis NIHLM001]
gi|394288952|gb|EJE32849.1| MutS2 family protein [Staphylococcus epidermidis NIH04008]
gi|394290079|gb|EJE33949.1| MutS2 family protein [Staphylococcus epidermidis NIH08001]
gi|394294313|gb|EJE37999.1| MutS2 family protein [Staphylococcus epidermidis NIH06004]
gi|394299039|gb|EJE42590.1| MutS2 family protein [Staphylococcus epidermidis NIH04003]
gi|394302179|gb|EJE45627.1| MutS2 family protein [Staphylococcus epidermidis NIH051668]
Length = 782
Score = 284 bits (726), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 242/811 (29%), Positives = 393/811 (48%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + + ++ HPLL +N+ DVE
Sbjct: 295 PTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S + S + ++R +L+ R A H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
+ Y++ ++ K L A K K Q+V+ A + D ++++ N LRD E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + DD + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R EEA ++LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V ++ P +G TVA +K
Sbjct: 752 QQHLKKHKSVRQFRGGMPNEGGFGVTVAELK 782
>gi|78044071|ref|YP_360393.1| DNA mismatch repair protein MutS [Carboxydothermus hydrogenoformans
Z-2901]
gi|123756755|sp|Q3ABU1.1|MUTS2_CARHZ RecName: Full=MutS2 protein
gi|77996186|gb|ABB15085.1| DNA mismatch repair protein MutS [Carboxydothermus hydrogenoformans
Z-2901]
Length = 777
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 233/824 (28%), Positives = 402/824 (48%), Gaps = 100/824 (12%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+KLL + L+ ++ + +DLS + D + I +L+ EI + + L+ + +
Sbjct: 45 EKLL-EVEEGLSYLRFKTVDLSVLSDFSEIFLKLSKESMLTGQEIYRLGQLLKVSKDTFF 103
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI--GFCIDCKLLIILDRASEDLELI 138
+++ A + L +++K F L + I F + + D AS +L+ I
Sbjct: 104 EISRGA---------FPRLKQIVKLLFFDEALVKDIERSFWPEG---TVKDEASPELKRI 151
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R + R + + ++K + A + +PLI+ R R + +KAS+K +P GI +
Sbjct: 152 RGQIARLKDKMREAVEKYLKEPELAKYLQEPLISVRGDRFVLPVKASYKSQVP-GIIHDR 210
Query: 199 SSSGATYFMEPKGAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
S++G T F+EP AVE N + L EI E+ IL T +A + EIK + +
Sbjct: 211 SNTGQTLFIEPYSAVEAGNELKTLELQEKEIIEK--ILKDFTQRLACNLTEIKRTYELLG 268
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
EIDL A+A A +D P +S +SF + +HPLL +
Sbjct: 269 EIDLIVAKARLALELDAYKPRISENGVLSFKQA------RHPLLGKKA------------ 310
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP D+ + E +++ITGPNTGGKT ++KT+G+ ++
Sbjct: 311 ------------------------VPFDLTLGKEFDLLIITGPNTGGKTVTLKTIGILTI 346
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA + F + DIGD QS+ Q+LSTFS H+ + ILE LVL
Sbjct: 347 MARAGLFIPASPETEIGLFGEVYVDIGDEQSIVQSLSTFSSHLLNLKFILENAREGDLVL 406
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP EG ALA +IL+ LR + V TTH ++L+ + R ENA+ EF E
Sbjct: 407 LDELGTGTDPREGAALAKAILEELRGKKVKVVATTHTSELAAYAIETERVENASVEFDPE 466
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
+L+PTYR+ G G SNAL IA+ +G +II++A+ + + ++ + +L + +
Sbjct: 467 SLKPTYRLHIGKPGRSNALYIAQGLGLKEQIIEKAKSFL-----KEEELKLDKLIFDVEQ 521
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
E+R+LE A+L + + ++ DE ++L++ + K ++ QQ+L + +
Sbjct: 522 EKRQLEKAKEEVANLLISLKEKEAKLNDELENLEKTKEEIIRKYREKYQQKLLEIERKGK 581
Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQV 676
V+++ + +++ + L++E+ +F++ + P+ GE V
Sbjct: 582 LVIEEIKEKIKTYEEKNLAKLLEEARQKTKEF------SQNFALPFEPIKPYRPKVGETV 635
Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 736
+ +G K A V+ V ++ +VQ G M++ V + IRP +KQ+
Sbjct: 636 ELVEVGQK-AEVLAV--GENYAIVQAGIMKLNVSFDQIRPA---------------QKQE 677
Query: 737 EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVI 794
++ + G + E + + Q LD+RGM EA ++ L A + +I
Sbjct: 678 KENEKGQVKKAGLELT---KKQNFNLELDIRGMNTLEAEPVVEKYLDNAYLAGVEKVRII 734
Query: 795 HGMGTGVVKERVLEILRNHPRVAKYEQESPMNY---GCTVAYIK 835
HG GTG +K+ + + LR P V K+ +P N G T Y+K
Sbjct: 735 HGKGTGALKKFLWDYLREVPFVKKF-NFAPQNQGGDGATEVYLK 777
>gi|420194100|ref|ZP_14699929.1| MutS2 family protein [Staphylococcus epidermidis NIHLM021]
gi|394266798|gb|EJE11423.1| MutS2 family protein [Staphylococcus epidermidis NIHLM021]
Length = 782
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 242/811 (29%), Positives = 393/811 (48%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + + ++ HPLL +N+ DVE
Sbjct: 295 PTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRCLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S + S + ++R +L+ R A H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
+ Y++ ++ K L A K K Q+V+ A + D ++++ N LRD E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + DD + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R EEA ++LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V ++ P +G TVA +K
Sbjct: 752 QQHLKKHKSVRQFRGGMPNEGGFGVTVAELK 782
>gi|126695576|ref|YP_001090462.1| DNA mismatch repair protein MutS family protein [Prochlorococcus
marinus str. MIT 9301]
gi|126542619|gb|ABO16861.1| putative DNA mismatch repair protein MutS family [Prochlorococcus
marinus str. MIT 9301]
Length = 803
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 252/859 (29%), Positives = 413/859 (48%), Gaps = 120/859 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
MG + IP E S++LLN+T + + + + S + DI+ + G
Sbjct: 41 MGKRAILSFDIP--SEYESSKRLLNETVEITQLENNLDKSISFSGVFDISRNIEICSKGG 98
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
++S SE+ + +T+ A N+ K L LD + S + L+ + N T K G
Sbjct: 99 VISSSELLEIAKTIAAARNLKKIL-----LDFEQRPYISSFTKNLIDHQNIETIF--KKG 151
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
+ + I D AS +L ++R E L KK+ +I I K L
Sbjct: 152 IESNGR---ISDNASNELSILRKE---------FLSKKLERKILVEKFIQKNLAYLQDTT 199
Query: 171 ITKRRSRMCVGIKASH--KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
I R R + +K ++ K+ GI + SSSG T + EP V N L A
Sbjct: 200 IGDRYGRPVLAVKVNYVDKF---KGIIHDSSSSGNTVYFEPDSVVNKGNKIASLEARITA 256
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
EE +L + ++ + + + +L ++ A R+ +++W+ G P +F+
Sbjct: 257 EEFKLLKKWSLVVSDNSENLIEMAAILLRLENALTRSRYSKWIGGKTP--------TFEK 308
Query: 289 S--INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
S I++ G HPLL+ + + PV +D
Sbjct: 309 SPIISLIGFTHPLLIWEHKKKGACP----------------------------PVAVDFY 340
Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
+ +VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+Q
Sbjct: 341 INRNIKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQ 400
Query: 407 SLEQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
SLE+NLSTFSGHISRI +IL+L+ + S+VL+DEIGSGTDP EG ALA ++L+ ++
Sbjct: 401 SLEENLSTFSGHISRIKEILDLLDHKKGLSVVLLDEIGSGTDPLEGSALAMALLKEFANK 460
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
+ TTHY D+ LK D+RFEN + F ++L+P Y + WG G SNAL+I+K IG
Sbjct: 461 SDITFATTHYGDIKALKYNDSRFENVSVAFDEDSLKPKYILNWGIPGRSNALSISKRIGL 520
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 583
D I+ A L+P+ + S + + L EE+ K ++ A AA L A L+ E++
Sbjct: 521 DESILNEA---ANYLKPKEVDNINS-IIKGLEEEKIKQQNSAEAAAELIARTEILHDELK 576
Query: 584 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLI 638
+ A ++ E ++ + + AK + V D +LRD + + I +
Sbjct: 577 RNYEYQKLNAEKIQEIERSKLSKHIVSAKKE----VIDLIKKLRDKNVNGEDTRIIGKRL 632
Query: 639 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 698
KE E+ ++ + + S+ PQ G+ V +KSL + +V +
Sbjct: 633 KEIETEHLTQKKSEK-----------SISWNPQVGDFVKIKSL-NSTGQIVGLDKKGGFY 680
Query: 699 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 758
++ G R + N I N ++ N + ++ +ED S+ +++
Sbjct: 681 EIKCGSFRSTLSVNEFEGI-NGEKPNFKSSKIEIKSTRED------------FSFS-KIR 726
Query: 759 TSKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 818
TSKN++D+RG+RV EA ++ + + L+++HG+GTG +K+ + L V K
Sbjct: 727 TSKNTIDVRGLRVHEAEIIIEEKIRKF--HGPLWIVHGIGTGKLKKGLRNWLSGLNYVDK 784
Query: 819 YEQ--ESPMNYGCTVAYIK 835
E + GC++A+IK
Sbjct: 785 IEDAANNEGGPGCSIAWIK 803
>gi|418620520|ref|ZP_13183324.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus hominis VCU122]
gi|374822650|gb|EHR86670.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus hominis VCU122]
Length = 783
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 237/810 (29%), Positives = 385/810 (47%), Gaps = 106/810 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R ++ V N +K + + + +Y L
Sbjct: 65 LSGLSKVSPLIHRAKIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQLLEEDEGVIKYPILN 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 124 ERMNQLPVLTDLYQEINE--KCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVKSQ 181
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + +IT R R + +KA ++ GI + S+SG T ++EP VE N
Sbjct: 182 ANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMN 236
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL N E E IL+ LT +A ++ + +ID A+A +A+ + G P
Sbjct: 237 NQISRLRNDEAVERERILTELTGLVAANDNNCLVAESVMGQIDFLTAKARYARSIKGTKP 296
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+ V ++ HPLL N + V + + I
Sbjct: 297 TFYKERTVYLPNAY------HPLL-----------------------NKDTVVANTIEFI 327
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+
Sbjct: 328 DDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFE 375
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL+ + SLVL DE+G+GTDPSEG ALA SI
Sbjct: 376 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSI 435
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L ++RD L + TTHY +L NA+ EF + TL PTY++L G G SNA +
Sbjct: 436 LDHVRDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFD 495
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+K +G II +A+ ++ E S++E LE ++ E+
Sbjct: 496 ISKKLGLGLNIINKAKTMIGTDEQE---------INSMIE---SLEKNSKRVDEQRIELE 543
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DEI 634
L RE DL+R+ K E + + + + A +I + ++ ++ L+D D+
Sbjct: 544 KLLREARTTHDDLERQYQQYKNYEQKLMDEAKDKANQRIKSATKEADDILKDLREMRDKK 603
Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVV 689
+ +KE E I + +D + + ++ G++V V S G K V+
Sbjct: 604 GADVKEHE----LIDKKKHLEDQYEAKSLKQNVKKQKWDDIHAGDEVKVLSYGQK-GEVL 658
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
E+ G+++ V VQ G +++++ PI + ++ P ++ R
Sbjct: 659 ELSGENEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQSR---------- 701
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVL 807
QT K LDLRG R EEA LD I A + +++IHG GTG +++ V
Sbjct: 702 --------QTIKTELDLRGYRYEEAVGALDQYIDQAVLSNYEQVYIIHGKGTGALQKAVQ 753
Query: 808 EILRNHPRVAKYEQESPM--NYGCTVAYIK 835
L+ H V + P +G TVA +K
Sbjct: 754 NHLKKHKSVQSFRGGMPSEGGFGVTVAELK 783
>gi|429728985|ref|ZP_19263676.1| MutS2 family protein [Peptostreptococcus anaerobius VPI 4330]
gi|429146586|gb|EKX89637.1| MutS2 family protein [Peptostreptococcus anaerobius VPI 4330]
Length = 809
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 240/861 (27%), Positives = 407/861 (47%), Gaps = 106/861 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
+G +++K PF K + + L T A +++ + + I +I + A G +L
Sbjct: 29 LGRNIIKKLN-PFSKYDQVKEALEETTEAQSILIKRGHVSMQGIHNIEDMAKRADIGGVL 87
Query: 61 SPSEICAVRRTLRAVNNVWKKLT-----------EAAELDGDSLQRYSPLLELLKNCNFL 109
+ + V T+RA + L+ E + D + + RY P+++ + ++
Sbjct: 88 DNASLIKVADTMRATRILSNLLSGDIKVETFGNAENSNKDKEEVTRY-PIIQTMAQSLYV 146
Query: 110 -TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
++E+ I I + + D AS +L +IR + +N+ S L + + +
Sbjct: 147 HRDVEDAIYNAIVSDIEV-SDNASSELRMIRRRILQKNQNIRSKLNSIISSTSYQKYLQD 205
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
+I+ R R + +KA ++ ++ GI + S SGAT F+EP VE NN +L E
Sbjct: 206 AIISMRGDRFVIPVKAEYRSVIS-GIIHDQSQSGATLFIEPMSIVEMNNDLRQLKLQETE 264
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ + + RE+ + + +D AFA+ + M V PIL+ D
Sbjct: 265 EIERILAELSGMVGEVARELISNQEILGRLDFAFAKGKLSIAMKAVDPILNR------DK 318
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
S I +HPL+ +N+ L D +
Sbjct: 319 SFRIVKGRHPLI------DKKTVVANTVYLGKDFSS------------------------ 348
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
++ITGPNTGGKT ++K +GL SLM++ GL++PA + FD + ADIGD+QS+
Sbjct: 349 -----LLITGPNTGGKTVTIKMVGLFSLMTQCGLHIPADFGTSMCVFDQVFADIGDNQSI 403
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQNLSTFS H++ IV+I++ V+ +SLV+ DE+G+GTDP EG ALA +IL+ +R L +
Sbjct: 404 EQNLSTFSSHMTSIVNIVDRVTEDSLVIFDELGAGTDPEEGAALAIAILEDIRTVGALCI 463
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENAA EF +ETL PTYR+L G G SNA I++ +G + +I
Sbjct: 464 ATTHYSELKKYALAKKGVENAAVEFDMETLSPTYRLLIGVPGKSNAFEISRKLGLNESVI 523
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
A+ ++ E + ++ QS+ + R K+E + A ++ +EI + E ED+ K
Sbjct: 524 LNAKFYMDNDDIELE-----DVLQSVEKNRLKIEEELSRAEAMRSEIENRKNEYEDKIKK 578
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
L+ A + + + AK + + +++ R++++ + + I+E I
Sbjct: 579 LEESKAKVMENARSEAFSIVRQAKEETEVLIKKLRKLERESASKDKDRRIEEIRREIGQT 638
Query: 649 VEAHRPDDDFSVSETNTSSFTPQF----------GEQVHVKSLGDKLATVVEVPGDDDTV 698
+ +P + S P+F G++V++ SL + TV+ +
Sbjct: 639 MGGLQP--------SLESMVVPKFASKEIKSLKAGQEVNIVSLRQE-GTVISADDNKKEA 689
Query: 699 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 758
+VQ G M++ + +++ I K N R ++ +SG+
Sbjct: 690 VVQVGIMKMTLPYKSLKII----EKKDKNTVTRTTRKVIRSKSGNVKRE----------- 734
Query: 759 TSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
DLRGM +EEA +D L AC + VIHG+GTGV+K + E L+ HP V
Sbjct: 735 ------DLRGMNLEEAIVAVDKYLDDACMAGHDEVTVIHGIGTGVLKSGIGEHLKRHPHV 788
Query: 817 A--KYEQESPMNYGCTVAYIK 835
+ Q G T+ +K
Sbjct: 789 KSQRKGQYGEGGIGVTIVEVK 809
>gi|374296809|ref|YP_005047000.1| MutS2 family protein [Clostridium clariflavum DSM 19732]
gi|359826303|gb|AEV69076.1| MutS2 family protein [Clostridium clariflavum DSM 19732]
Length = 793
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 235/797 (29%), Positives = 385/797 (48%), Gaps = 104/797 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +L+P E+ + LRAV N+ K + +A + L+
Sbjct: 65 LGGIHDIRDSVRRAEIGSMLNPGELMRIANVLRAVRNL-KNYSNSANVKEGEDNIVGELI 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
E L+ +E+KI CI + I D AS L IR + + ++ L ++
Sbjct: 124 ECLEAAK---RIEDKINLCIVSEEEI-SDNASPALGSIRRQIRHAQNSIKDKLNELIRSP 179
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ +P++T R R + +K ++ +P G+ + S+SGAT F+EP VE NN
Sbjct: 180 KYQKYMQEPIVTMRGERYVIPVKQEYRTEVP-GLIHDSSASGATLFIEPMAVVEANNAIR 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSS 280
L E AE IL L+ ++A+ E+ ++ + ++D FA+A + + VCP L++
Sbjct: 239 ELKIKEEAEIERILRELSCDVAEIAVELNTNINLLAKLDFIFAKAKLSLEYNCVCPKLNN 298
Query: 281 QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP 340
+ + +HPLL+ ++
Sbjct: 299 EGKIIIKKG------RHPLLVPKTV----------------------------------- 317
Query: 341 VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILA 400
VPID + + +V+TGPNTGGKT ++KT+GL +LM++AGL++PA L F+ + A
Sbjct: 318 VPIDFWIGEDFHTLVVTGPNTGGKTVTLKTVGLFTLMAQAGLHIPAGEGTVLSVFNKVFA 377
Query: 401 DIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL 460
DIGD QS+EQ+LSTFS H+ IV+ILE + +LVL DE+G+GTDP+EG ALA +IL++L
Sbjct: 378 DIGDEQSIEQSLSTFSSHMKNIVNILENIDDRTLVLFDELGAGTDPTEGAALAMAILEHL 437
Query: 461 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 520
+DR V TTHY+ L ENA EF +ETL+PTY++L G G SNA I+K
Sbjct: 438 KDRGCTVVATTHYSQLKVYAVTTPYVENACCEFDVETLKPTYKLLIGVPGRSNAFAISKR 497
Query: 521 IGFDRKIIQRAQKLV--ERLRPE----------RQQHRKSELYQSLMEERRKLESQ-ART 567
+G +I+RA+ + E ++ E Q + Q L +E K++S+
Sbjct: 498 LGLTDSVIERAKSYLTSEEIKFEDMLLNIEKNLNQSENEKLQAQLLKQEAEKIKSEMENE 557
Query: 568 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 627
L + + RE +EA+ L A H E + E+ ++Q ++ EN
Sbjct: 558 KRKLEEKKEKILREAREEARKLLLNAKH----EADNILSEMR--RIQ-----KERENIQS 606
Query: 628 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDK 684
+A+E+ +K S I I +A SV NT P+ G+ V + +L +
Sbjct: 607 QKAAEEMRLKLK---SNIDTIEDALSK----SVMPKNTLVKPPKNLKPGDSVLIVNLNQR 659
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
TV+ P D +VQ G M++ V N++ + K ++ ++G
Sbjct: 660 -GTVITPPDRDGEAIVQVGIMKINVHITNLKLVDEQK--------------EQIYKTGVG 704
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
S +A + + +D+RGM +++A +D L + +IHG GTG++
Sbjct: 705 EISVSKA------KNISSEIDVRGMPLDDALEAIDKYLDDVVISGLPEICIIHGKGTGIL 758
Query: 803 KERVLEILRNHPRVAKY 819
+ + + L+++ RV+ Y
Sbjct: 759 RNGIHQYLKSNKRVSSY 775
>gi|228476275|ref|ZP_04060977.1| MutS2 protein [Staphylococcus hominis SK119]
gi|228269678|gb|EEK11180.1| MutS2 protein [Staphylococcus hominis SK119]
Length = 783
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 236/810 (29%), Positives = 386/810 (47%), Gaps = 106/810 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R ++ V N +K + + + +Y L
Sbjct: 65 LSGLSKVSPLIHRAKIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQLLEEDEGVIKYPILN 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 124 ERMNQLPVLTDLYQEINE--KCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVKSQ 181
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + +IT R R + +KA ++ GI + S+SG T ++EP VE N
Sbjct: 182 ANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMN 236
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL N E E IL+ LT +A ++ + +ID A+A +A+ + G P
Sbjct: 237 NQISRLRNDEAVERERILTELTGLVAANDNNCLVAESVMGQIDFLTAKARYARSIKGTKP 296
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+ V ++ HP+L N + V + + I
Sbjct: 297 TFYKERTVYLPNAY------HPIL-----------------------NKDTVVANTIEFI 327
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+
Sbjct: 328 DDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFE 375
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL+ + SLVL DE+G+GTDPSEG ALA SI
Sbjct: 376 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSI 435
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L ++RD L + TTHY +L NA+ EF + TL PTY++L G G SNA +
Sbjct: 436 LDHVRDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFD 495
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+K +G II +A+ ++ E S++E LE ++ E+
Sbjct: 496 ISKKLGLGLNIINKAKTMIGTDEQE---------INSMIE---SLEKNSKRVDEQRIELE 543
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DEI 634
L RE DL+R+ K E + + + + A +I + ++ ++ L+D D+
Sbjct: 544 KLLREARTTHDDLERQYQQYKNYEQKLMDEAKDKANQRIKSATKEADDILKDLREMRDKK 603
Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVV 689
+ +KE E I + +D + + ++ G++V V S G K V+
Sbjct: 604 GADVKEHE----LIDKKKHLEDQYEAKSLKQNVKKQKWDDIHAGDEVKVLSYGQK-GEVL 658
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 659 ELSGENEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR---------- 701
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVL 807
QT K LDLRG R EEA LD I A + +++IHG GTG +++ V
Sbjct: 702 --------QTIKTELDLRGYRYEEAVGALDQYIDQAVLSNYEQVYIIHGKGTGALQKAVQ 753
Query: 808 EILRNHPRVAKYEQESPM--NYGCTVAYIK 835
L+ H V + P +G TVA +K
Sbjct: 754 NHLKKHKSVQSFRGGMPSEGGFGVTVAELK 783
>gi|251810592|ref|ZP_04825065.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876408|ref|ZP_06285275.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis SK135]
gi|417913383|ref|ZP_12557050.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU109]
gi|418624906|ref|ZP_13187566.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU125]
gi|420172837|ref|ZP_14679335.1| MutS2 family protein [Staphylococcus epidermidis NIHLM067]
gi|420198524|ref|ZP_14704232.1| MutS2 family protein [Staphylococcus epidermidis NIHLM020]
gi|420226953|ref|ZP_14731726.1| MutS2 family protein [Staphylococcus epidermidis NIH05003]
gi|421607338|ref|ZP_16048584.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis AU12-03]
gi|251805752|gb|EES58409.1| MutS family DNA mismatch repair protein [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295433|gb|EFA87960.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis SK135]
gi|341655665|gb|EGS79389.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU109]
gi|374826171|gb|EHR90079.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU125]
gi|394241514|gb|EJD86928.1| MutS2 family protein [Staphylococcus epidermidis NIHLM067]
gi|394264219|gb|EJE08915.1| MutS2 family protein [Staphylococcus epidermidis NIHLM020]
gi|394297454|gb|EJE41051.1| MutS2 family protein [Staphylococcus epidermidis NIH05003]
gi|406657130|gb|EKC83523.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis AU12-03]
Length = 782
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 243/811 (29%), Positives = 393/811 (48%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S + S + ++R +L+ R A H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
+ Y++ ++ K L A K K ++V+ A + D ++++ N LRD E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANKRVKS----ATKEADEILKELRN-LRDHKGAE 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + DD + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E+ G+++ V VQ G +++++ PI + ++ P +++R
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R EEA ++LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V ++ P +G TVA +K
Sbjct: 752 QQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|381183546|ref|ZP_09892273.1| recombination and DNA strand exchange inhibitor protein
[Listeriaceae bacterium TTU M1-001]
gi|380316562|gb|EIA19954.1| recombination and DNA strand exchange inhibitor protein
[Listeriaceae bacterium TTU M1-001]
Length = 784
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 256/842 (30%), Positives = 402/842 (47%), Gaps = 118/842 (14%)
Query: 16 SLEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S + QK+ ++T +++ S P+ + + D+A L G L+ EI + L
Sbjct: 39 SFDSIQKMQSETEEGAKIIRLKGSAPI--TGLSDVAPHLKRLEIGGDLNGLEIYQIGSNL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
R V+ V K + E G L PLL EL K L +LEE+I +D + +LD A
Sbjct: 97 R-VSRVMKNFMDDLEEIGVEL----PLLFELTKEILVLKDLEEEINLTVD-EAGYMLDTA 150
Query: 132 SEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
SE L +R R E L+SLL+ A A + +IT R R + +K ++
Sbjct: 151 SETLRSVRQTLARTEGRVREKLESLLRDRNA----ATMLSDAIITIRNDRYVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
G+ + S+SG T F+EP+ V+ NN L E E IL+ ++A++A+ +E
Sbjct: 207 SHY-GGVIHDQSASGQTLFVEPQSVVDLNNERRALQAKENQEIERILAEMSAKLAEFIQE 265
Query: 248 IK---YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
I Y++ R D A+A F + + P H++ + + +HPLL
Sbjct: 266 IHHNTYILGR---FDFILAKARFGKSQKAITP------HLNNEGVTKLYAARHPLL---- 312
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
D EN V DI + +VITGPNTGGK
Sbjct: 313 ----------------DPENV---------------VANDILLGDGYSTIVITGPNTGGK 341
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KTLGL ++M++AGL +PA+ + ++ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 342 TITLKTLGLLTMMTQAGLQIPAQEESLVAIYEDIFADIGDEQSIEQSLSTFSSHMTNIVS 401
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
ILE +++ SLVL DE+G+GTDP EG ALA SIL + R V TTHY +L
Sbjct: 402 ILEKLNQNSLVLFDELGAGTDPQEGAALAISILDEVAKRGASVVATTHYPELKAYGYNRV 461
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
NA+ EF++ETL PTY++L G G SNA I++ +G + +I A+ LV + +
Sbjct: 462 FATNASVEFNVETLSPTYKLLIGIPGRSNAFEISRRLGLNEGVIDEARALV-----DTES 516
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
+E+ SL E+R E++ + A+ L + L R+++ E + + L + ++
Sbjct: 517 ADLNEMISSLEEKRNLAEAEYKEASELAKDADKLLRDLQKEIRTYYEQKDKLLERANEKA 576
Query: 605 QQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ + A+ + DT++++ E QLR AS + + LI +++S +A +
Sbjct: 577 SEVVTAAEEEADTIIRELRELQLRGASGVKEHELI-DAKSRLAGAKPKTIQKKVVHPVKK 635
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
F Q G+ V V SLG K + +V G + VQ G +++++K+ ++ I K K
Sbjct: 636 VAHKF--QEGDGVRVLSLGQKGVLLDKVSGSEWN--VQIGIIKMKIKETDLEYIQPEKPK 691
Query: 724 ------NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 777
N N P + LDLRGMR E+A +
Sbjct: 692 KQRVITNVRNTEP-----------------------------VRAELDLRGMRYEDALFE 722
Query: 778 LD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAY 833
+D I A + +IHG GTG ++ V E L+NH V ++ + G T+A
Sbjct: 723 VDKYIDEALLAGYPRVAIIHGKGTGALRTGVTEFLKNHRMVKNIRFGDAAEGGNGITIAE 782
Query: 834 IK 835
+K
Sbjct: 783 LK 784
>gi|315649009|ref|ZP_07902103.1| MutS2 family protein [Paenibacillus vortex V453]
gi|315275690|gb|EFU39044.1| MutS2 family protein [Paenibacillus vortex V453]
Length = 789
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 254/848 (29%), Positives = 407/848 (47%), Gaps = 127/848 (14%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE + LL T A + ++ P I DI L A G LSP E+ A T+
Sbjct: 40 LEAVKDLLAATDQAYTVDRLKGNP-SFRGITDINDALKRARIGGTLSPHELLATSNTIHG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE----LEEKIGFCIDCKLLIILDR 130
+ K+ A D +E+L N + L LE+ I CID +LD
Sbjct: 99 SRRI-KRFIAALHEDEQ--------IEILFNLSDLISEQKPLEDAIRLCID-DAAEVLDS 148
Query: 131 ASEDLELIRAERK----RNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
AS +L IR E + R E L+S+++ + A++ Q LIT R R + +KA
Sbjct: 149 ASAELSQIRRELRGGEVRIREKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAE 203
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ GI + S SGAT F+EP+ V NN E E IL LTA++ +
Sbjct: 204 YRSHF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRMREEREIEVILQKLTAQVGEQA 262
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ +D + ++D FA+A A M P ++ + ++ +HPL+
Sbjct: 263 DLLSMDLDLIGQLDFIFAKARLAHVMRASLPRMNDRGYIKLRKG------RHPLI----- 311
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
P+ D VP+D+++ +++TGPNTGGKT
Sbjct: 312 -----------PM-------------------DQVVPLDVELGNTYTSIIVTGPNTGGKT 341
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +LM+ +GL++PA+ ++ FD I ADIGD QS+EQ+LSTFS H++ I+ I
Sbjct: 342 VTLKTIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRI 401
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDT 484
L ++++SLVL+DE+G+GTDP+EG ALA SIL+++ R+G ++ TTHY++L +
Sbjct: 402 LGQMTQKSLVLLDEVGAGTDPAEGSALAISILEHIH-RMGCRMIATTHYSELKAYAYERK 460
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
NA+ EF + TL PTYR+L G G SNA IA+ +G I++ A+ V + +
Sbjct: 461 GVINASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEED 515
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
R + SL E R E + A + E+ +L E E + L+ + L K +
Sbjct: 516 QRVEHMIASLEENRHTAEMEREKAEQVRKEMEELRVRHEHELQKLEEQKDKLVDKARMEA 575
Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
+Q ++ A+ + + ++ D LR + +E S +KE + ++ A + DD +
Sbjct: 576 RQIVDKARSEAEEIISD----LRKIALEEGAS-VKEHK-----LIAARKRLDDAEPQQGK 625
Query: 665 TS----------SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
+ S P G++V V SL K VVE+ G + V VQ G M+++V +++
Sbjct: 626 KTGGQRSAKQQRSIEP--GDEVRVFSLNQK-GHVVEMTGSKEAV-VQLGIMKMKVALDDL 681
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
+ N P +Q +Q + +A+ +N LDLRG +EEA
Sbjct: 682 ELLSN----------PAANAKQAPKQHATILKRTRDANI-------RNELDLRGANLEEA 724
Query: 775 SHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY----- 827
++D I A + + +IHG GTG+++ + + LR H V + NY
Sbjct: 725 LIEVDRFIDEAFLGNLGQISIIHGKGTGILRTGIQDYLRKHKHVKSHRLG---NYGEGGN 781
Query: 828 GCTVAYIK 835
G T+A +K
Sbjct: 782 GVTIAELK 789
>gi|397906326|ref|ZP_10507138.1| Recombination inhibitory protein MutS2 [Caloramator australicus
RC3]
gi|397160629|emb|CCJ34475.1| Recombination inhibitory protein MutS2 [Caloramator australicus
RC3]
Length = 788
Score = 283 bits (724), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 250/824 (30%), Positives = 408/824 (49%), Gaps = 103/824 (12%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
+P LE +L A +++ L L ++DI + A G L+PSE+ V
Sbjct: 35 LPTSNLLEVEDRLRETKEAYDVVLKWGSLPLEGVKDIEDSVKRAKMGFTLTPSELLRVSD 94
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
LR V K+L ++ DG + Y + E++++ ++ LEE I I + I DR
Sbjct: 95 ILR----VTKRL-KSFFADGAKKENYPIINEIIESLFYIKSLEEDIERAIVSEEEID-DR 148
Query: 131 ASEDLELIRA----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
ASE L IR + +R E L S+L ++ + +P+IT R R + +K+
Sbjct: 149 ASEKLYSIRRAIKDKNQRVKEKLQSMLHSLSKYL------QEPIITMRNGRYVIPVKSEF 202
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K + G+ + S+SG+T F+EP VE NN L E E IL L+ ++AK+
Sbjct: 203 KGSVA-GLVHDQSASGSTLFIEPMPIVELNNEIRELELKEKVEIERILKELSEKVAKNSE 261
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
E+ + + + +D A+A F +D P V+ IN++ +HPL+
Sbjct: 262 ELLHDNENIAYLDFLMAKAKFGLDLDASIP------EVNDKGIINMKRARHPLI------ 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
D E VPIDI++ +VITGPNTGGKT
Sbjct: 310 --------------DKEKV---------------VPIDIRLGQNYNALVITGPNTGGKTV 340
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT GL +LM+ AGL +P + + F+ + ADIGD QS+EQ+LSTFS H+ I++I+
Sbjct: 341 TLKTTGLLTLMAMAGLAIPCSDGSTVSVFNKVFADIGDEQSIEQSLSTFSSHMKNIINIV 400
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ +SL+L+DE+G+GTDPSEG ALA S+L+Y + V TTHY+++ + F
Sbjct: 401 KEADEKSLILVDELGAGTDPSEGAALAMSLLEYFYKKGAKLVATTHYSEIKVFAMEKEGF 460
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF +ETLRPTYR+L G G SNA I+K +G D II RA++ + + +
Sbjct: 461 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLDEGIINRAREFI-----SKDVAK 515
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
++ QSL + LE + + E ++L +E ++ L+ + + KE ++ Q+
Sbjct: 516 FEDVIQSLQNKTLLLEREIDEVQKIKRENLELKKEYSEKKYKLESQ----RDKEIKKAQE 571
Query: 607 E----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEA----HRPDDDF 658
E + AK + D ++++ N+LR A E S I+E+E A + +++
Sbjct: 572 EARRIIRQAKEEADAILKEL-NELR-KRALEAES-IREAEEARKKLKNKLDAMSSKEEEV 628
Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
V + + + G++V+V ++ K TV+ +P VLVQ G M++ V
Sbjct: 629 IVKDGMIEARDVKVGDEVYVSTVSAK-GTVLSLPDAKGEVLVQIGVMKMSV--------- 678
Query: 719 NSKRKNAANPAPRLR-KQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 777
P +L +++ +Q+ G++ + T S+DLRG ++EA +
Sbjct: 679 ---------PLDKLFIEEKGKKQAQKLGTTKIIKEKAENIST---SIDLRGQTIDEALYN 726
Query: 778 LDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
LD L A + + +IHG GTG ++E + LR+H V +
Sbjct: 727 LDKYLDDAFLSGLTKVTIIHGKGTGALREGIQRALRSHSHVKSF 770
>gi|289422692|ref|ZP_06424532.1| MutS2 family protein [Peptostreptococcus anaerobius 653-L]
gi|289156871|gb|EFD05496.1| MutS2 family protein [Peptostreptococcus anaerobius 653-L]
Length = 807
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 240/861 (27%), Positives = 406/861 (47%), Gaps = 105/861 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
+G +++K PF K + + L T A +++ + + I +I + A G +L
Sbjct: 26 LGRNIIKKLN-PFSKYDQVKEALEETTEAQSILIKRGHVSMQGIHNIEDMAKRADIGGVL 84
Query: 61 SPSEICAVRRTLRAVNNVWKKLT-----------EAAELDGDSLQRYSPLLELLKNCNFL 109
+ + V T+RA + L+ E + D + + RY P+++ + ++
Sbjct: 85 DNASLIKVADTMRATRILSNLLSGDIKVETFGNAENSNKDKEEVTRY-PIIQTMAQSLYV 143
Query: 110 -TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
++E+ I I + + D AS +L +IR + +N+ S L + + +
Sbjct: 144 HRDVEDAIYNAIVSDIEV-SDNASSELRMIRRRILQKNQNIRSKLNSIISSTSYQKYLQD 202
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
+I+ R R + +KA ++ ++ GI + S SGAT F+EP VE NN +L E
Sbjct: 203 AIISMRGDRFVIPVKAEYRSVIS-GIIHDQSQSGATLFIEPMSIVEMNNDLRQLKLQETE 261
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ + + RE+ + + +D AFA+ + M V PIL+ D
Sbjct: 262 EIERILAELSGMVGEVARELISNQEILARLDFAFAKGKLSIAMKAVDPILNR------DK 315
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
S I +HPL+ +N+ L D +
Sbjct: 316 SFRIVKGRHPLI------DKKTVVANTVYLGKDFSS------------------------ 345
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
++ITGPNTGGKT ++K +GL SLM++ GL++PA + FD + ADIGD+QS+
Sbjct: 346 -----LLITGPNTGGKTVTIKMVGLFSLMTQCGLHIPADFGTSMCVFDQVFADIGDNQSI 400
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQNLSTFS H++ IVDI++ V+ +SLV+ DE+G+GTDP EG ALA +IL+ +R L +
Sbjct: 401 EQNLSTFSSHMTSIVDIVDRVTEDSLVIFDELGAGTDPEEGAALAIAILEDIRTVGALCI 460
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENAA EF +ETL PTYR+L G G SNA I++ +G + +I
Sbjct: 461 ATTHYSELKKYALAKKGVENAAVEFDMETLSPTYRLLIGVPGKSNAFEISRKLGLNESVI 520
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
A+ ++ E + ++ QS+ + R K E + A ++ +EI E ED+ K
Sbjct: 521 LNAKFYMDNDDIELE-----DVLQSVEKNRLKTEEELSRAEAMRSEIEARKNEYEDKIKK 575
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
L+ + + + + AK + + +++ +++++ + + I+E I
Sbjct: 576 LEESKSKVMENARSEAFSIVRQAKEETEVLIKKLRKLEQESASKDKDRRIEEIRREIGQT 635
Query: 649 VEAHRPDDDFSVSETNTSSFTPQF----------GEQVHVKSLGDKLATVVEVPGDDDTV 698
+ +P + S P+F G +V++ SL + TV+ +
Sbjct: 636 MGGLQP--------SLESMVVPKFASKEIKSLKAGAEVNIVSLRQE-GTVISADDNKKEA 686
Query: 699 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 758
+VQ G M++ + +++ I K N R ++ +SG+
Sbjct: 687 VVQVGIMKMTLPYKSLKII----EKKEKNTVTRTTRKVIRSKSGNV-------------- 728
Query: 759 TSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
K +DLRGM +EEA +D L AC + VIHG+GTGV+K + E L+ HP V
Sbjct: 729 --KREVDLRGMNLEEAIVAVDKYLDDACMAGHDEVTVIHGIGTGVLKSGIGEHLKRHPHV 786
Query: 817 A--KYEQESPMNYGCTVAYIK 835
+ Q G T+ +K
Sbjct: 787 KSQRKGQYGEGGIGVTIVEVK 807
>gi|295105593|emb|CBL03137.1| MutS2 family protein [Faecalibacterium prausnitzii SL3/3]
Length = 804
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 252/817 (30%), Positives = 387/817 (47%), Gaps = 139/817 (17%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLE 101
+E ++ + AV G +LS E+ V LR ++ W +E L D L Y+ E
Sbjct: 68 VEGVSQLAARAVKGGVLSMGELLMVAGALRNFQHLTSWYGSSEHDALPTDDL-FYALAPE 126
Query: 102 LLKNCNFLTELEEKIGFCI---DCKLLIILDRASEDL-EL---IRAERKRNMENLDSLLK 154
LE++I I D + D AS L EL IRA + L+S+++
Sbjct: 127 --------PGLEQQISSAILAPDA----MADTASRTLAELRKKIRATENSIRDRLESMVR 174
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ + + + +++ R R V +K+ ++ + GI +VSS+GAT F+EP+ VE
Sbjct: 175 NMDTSKY----LQESVVSMRNGRYVVPVKSEYRGEV-SGIIHDVSSTGATVFVEPQAVVE 229
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
N ++ E E IL TA++A E + +Y +LEID+ A+A A +
Sbjct: 230 ANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLEIDILLAKARLALELKAF 289
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P V DSS N+ +HPL+ +P K
Sbjct: 290 KPA------VRTDSSFNLIRARHPLI---------------DPQKC-------------- 314
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
VP+DI + E ++ITGPNTGGKT ++KT GL M++ G +PA +
Sbjct: 315 ------VPVDIALGGEYDSLIITGPNTGGKTVTLKTAGLLCAMAQCGFLIPADERSEICV 368
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
FD L DIGD QS+EQ+LSTFSGH+ +I ILEL +LVL+DE+G+GTDP+EG ALA
Sbjct: 369 FDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLLDELGAGTDPAEGAALAV 428
Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
+I++ LR R L + TTHYA+L + NA+ EF LETLRPTY++ G G SNA
Sbjct: 429 AIIEELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLETLRPTYKLSVGVPGKSNA 488
Query: 515 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 574
I++ +G ++I+ AQ Q L E ++L++ L +
Sbjct: 489 FLISEKLGIPSRVIEAAQ-------------------QHLSAEDKRLDAVLGQLDDLKLQ 529
Query: 575 IMDLYREIEDEAKDLDRRAAH-LKAKE------TQQVQQELNFAKVQIDTVVQDFENQ-- 625
+ +E ++E + L A+H L+A QQ + EL A+ + T+ Q E Q
Sbjct: 530 L----KESQNEVEQLRNEASHQLEAARKKRDELIQQGENELEAARAKARTLAQQVETQAY 585
Query: 626 -----LRDASADEINS-----------LIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
LR DE S KE+E A H P F
Sbjct: 586 ALTDELRQLQKDERMSAQQKAQRAREIAKKETEKLFAGTEVVHNP----------VKEFV 635
Query: 670 P----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
P + G++V + L ++LATV+ +P + VLV+ G ++ +V ++ P K +
Sbjct: 636 PLKDVKVGQEVCIAEL-NQLATVLALPDKNGDVLVRAGIIKTKVPLKGLKQ-PEKLVKES 693
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ-TSKNSLDLRGMRVEEASHQLD--IAL 782
AP+ + QQ R S G +N RVQ T+K +L G+ V+EA ++D I
Sbjct: 694 T--APKTKAQQ--RYSRLTGDTNRPNGRVERVQRTAKMECNLLGLTVDEALSEVDSFIDR 749
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A ++V+++IHG GTG ++ + + LR + V +
Sbjct: 750 AILNGQTVVYLIHGNGTGALRTAIHKHLRGNRMVKSF 786
>gi|345861074|ref|ZP_08813351.1| mutS2 family protein [Desulfosporosinus sp. OT]
gi|344325837|gb|EGW37338.1| mutS2 family protein [Desulfosporosinus sp. OT]
Length = 787
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 236/838 (28%), Positives = 396/838 (47%), Gaps = 100/838 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
IPF E + L +T +++ PL + ++I + + G ++ E+ +R
Sbjct: 37 IPF-IDWESVRLALQETEEGKNLLRGNPLFSVRGAKEIRPYIERCLRGGVIHGEELLEIR 95
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLII 127
TLR + L E E + L E++ +LE++I CI D K +
Sbjct: 96 DTLRVGRKIKLLLLELNE-------GFPGLWEIVLPIEPQKDLEDEISRCIAEDGK---V 145
Query: 128 LDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
D AS +L +R + R E+L++ L+ A Q + P+IT+R R + IK
Sbjct: 146 ADSASPELADLRRALNRLQNRIRESLEATLRNSAYQKM----LQDPIITQRSDRYVLPIK 201
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
++ P GI + S+SGAT F+EP V N + E E IL +L+++I
Sbjct: 202 QEYRTAFP-GIVHDQSASGATLFIEPMPVVHLGNELREVILKEQREVMRILQMLSSQIEA 260
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+ L + + ++DL A+A + M+ P L + + +HPL+LG
Sbjct: 261 RVDAVAELHEALAKLDLVVAKAQLSVAMNAGAPELVKGQQMKLVQA------RHPLILGK 314
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
VP+ +++ + +V+TGPNTGG
Sbjct: 315 V------------------------------------VPLSLELGIDFDTLVVTGPNTGG 338
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++K +GL + M+++GL++PA+N R+ F I ADIGD QS+EQ+LSTFSGH+ IV
Sbjct: 339 KTVALKVVGLMAAMTQSGLHIPAENDSRMGVFTQIFADIGDEQSVEQSLSTFSGHMKNIV 398
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
+I++ SLVL+DE+G+GTDP+EG ALA IL L +R V TTHY L +
Sbjct: 399 EIIDRSDERSLVLLDEVGAGTDPTEGAALAMGILAELHERGCRTVSTTHYGALKTFAYET 458
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
R +NA+ EF ETLRPTYR+L G G SNA IA +G +++++A V ER+
Sbjct: 459 PRVKNASVEFDTETLRPTYRLLIGIPGKSNAFTIAGRLGLSEQVLEKANTFV----TERE 514
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
++L ++L E R++E + + + + + +E+++ LD L + +
Sbjct: 515 MQ-VADLIENLGETHREIELEKQKVKTGRQAVERQSKALEEKSILLDEEYELLLSMAKDE 573
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ + A+ + D ++++ + L+ + + + I+++ I + R D V
Sbjct: 574 ASELVRQARREADAIIEELKAALKKENKQQQD--IEKARQGFHRI--SARLDKGRKVQRP 629
Query: 664 NTSSFTPQ--FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
+ Q G+ V + L K V+++P + VLVQ G M+V V
Sbjct: 630 GSGLVADQIKLGQTVQMTKLRQK-GQVIKLPNANGEVLVQAGIMKVMV------------ 676
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 781
P L+ E+++ S + + + + ++ +DLRGM VEE + LD
Sbjct: 677 ------PLVELKLTNEEKKIRPKYSRDVNIGF-QKAEEIRSEIDLRGMLVEEGTEVLDKY 729
Query: 782 L--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A +++VIHG GTG ++ + + LR HP V + + + G TV +K
Sbjct: 730 LDDAVLSGVGLIYVIHGKGTGAMRAGIQDFLRGHPHVRSFRLGEYGEGDSGVTVVELK 787
>gi|375088406|ref|ZP_09734746.1| MutS2 family protein [Dolosigranulum pigrum ATCC 51524]
gi|374562444|gb|EHR33774.1| MutS2 family protein [Dolosigranulum pigrum ATCC 51524]
Length = 790
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 245/834 (29%), Positives = 403/834 (48%), Gaps = 114/834 (13%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVN 76
QK ++T A +++ + L ++ EDI L G +LS EI + R + R +
Sbjct: 47 QKWQDETEDAAKLLRMKGGLPIAAFEDIKPHLKRLTIGGVLSEGEIVDIARVIKNSRELK 106
Query: 77 NVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +L E A EL L +L L LE KI ID + + D AS L
Sbjct: 107 QFFSQLKEEAIEL--------KQLYQLNDALYSLQSLERKIREVID-ESGTVSDDASPKL 157
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR K+ +++ L ++ + Q+ + +IT R +R + +KA + + G+
Sbjct: 158 RGIRTGIKQMEQSVRDKLDRIV-RGKQSRYLTDSIITIRNNRYVIPVKADSRAVF-GGVV 215
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ SS+G T F+EP+ + NN + + E AE IL+ L+ IA EI+ + R+
Sbjct: 216 HDQSSTGQTLFIEPQSVLNLNNKLKQYRSEEQAEIDRILAELSELIAPHTNEIEANLRRL 275
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
++ D A+A +A+ +D P +S + S+++ G +HPL+
Sbjct: 276 VQFDFIQAKATYAKQLDASRP------EISENLSVSLIGARHPLIK-------------- 315
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+D V DI + + + +V+TGPNTGGKT +KTLGL
Sbjct: 316 ---------------------ADEVVANDIIIGEDYKAIVVTGPNTGGKTVILKTLGLMQ 354
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM +AGL++PA+ + F ADIGD QS+EQ+LSTFS H++ IV IL + +SL+
Sbjct: 355 LMGQAGLHIPAEQGSVIGLFTKWFADIGDEQSIEQSLSTFSSHMTNIVSILNQLDEKSLI 414
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP EG ALA ++L Y+ + ++T+HY +L + NA+ EF +
Sbjct: 415 LLDELGAGTDPQEGAALAIAMLDYIASQGSTVMITSHYPELKVYGYNRPQTINASMEFDV 474
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKS 548
++L PTYR+L G G SNA IA+ +G II +Q+L V+ + + +Q RK
Sbjct: 475 DSLSPTYRLLLGVPGRSNAFEIARRLGLSEHIIASSQQLMSGESQSVDNMIGDLEQKRKE 534
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
Q+ ++L+ + A LH E+ D Y E L+++A +E ++ QE
Sbjct: 535 AEKQN-----KQLKQELYQATQLHNELKDFYASYEKHKDHLEQKA----QEEANEIIQE- 584
Query: 609 NFAKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPDDDF---SVSE 662
A+ + D ++++ + QL A +KE E A + + H + V +
Sbjct: 585 --AQKEADRIIEELRHRQLEGEQAPN----VKEHEFIDAKSRLSNLHYEQEHLKQNKVLQ 638
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
G++VHV S D+ +VE D+ +VQ G +++++ ++ ++ + +K
Sbjct: 639 KEKQKKELAAGDEVHVLSF-DQPGILVE-QTDEKEWVVQMGMLKMKIDESELK-VKETKE 695
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--I 780
K A P +R + + + +DLRG RV EA L+ I
Sbjct: 696 K-AKQPKTTVRASKS---------------------SIRTEVDLRGQRVHEAVKSLEQYI 733
Query: 781 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
A + + +IHGMGTG V++ V + LR HPRVA + ++P N G A I
Sbjct: 734 DQALLANYHQVTIIHGMGTGAVRKAVHKRLREHPRVASF-NDAPANQGGNGATI 786
>gi|187776956|ref|ZP_02993429.1| hypothetical protein CLOSPO_00500 [Clostridium sporogenes ATCC
15579]
gi|187775615|gb|EDU39417.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sporogenes ATCC 15579]
Length = 788
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 243/816 (29%), Positives = 406/816 (49%), Gaps = 96/816 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A G L P ++ + L
Sbjct: 39 SVYEVREHLQETKEAFKLLVTKGAPPFE--GVYDIRSGISLAEKGSTLLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R +K+ E + + Y L ++ + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARR-FKEYINYKEEE----ESYRVLEDICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150
Query: 133 EDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE ILS+L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG KHPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-KHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ +PI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------IPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGSKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKA-KETQQVQ 605
EL Q+L E+ K + AR A +L E ++ E++ + L R A + A +E + +
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNAFIDARREAKNII 577
Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
+E AK + D +++D R + + ++E + +++ + +V +
Sbjct: 578 RE---AKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHKGEA 634
Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+
Sbjct: 635 LKNVKE-GDEVLLVSINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKD--------- 680
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--A 783
LR + + ++ + + ++S+DLRGM EEA + +D L A
Sbjct: 681 ------LRAAKGSNSNSNSSKIKKSKKLNLNLSRVESSVDLRGMDAEEAIYTVDKYLDEA 734
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ ++HG GTGV+++ ++++L+ HP V ++
Sbjct: 735 YLGGLGEVTIVHGKGTGVLRKTIMDMLKGHPHVKRH 770
>gi|73662960|ref|YP_301741.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus saprophyticus subsp. saprophyticus ATCC
15305]
gi|123642323|sp|Q49WR1.1|MUTS2_STAS1 RecName: Full=MutS2 protein
gi|72495475|dbj|BAE18796.1| MutS-like protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 782
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 237/816 (29%), Positives = 398/816 (48%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I+ ++ A G +LS SE+ ++R ++ + N +K L+ + Y L
Sbjct: 65 LSGLAKISTYIHRAKIGGVLSVSELNVIKRLIQ-IQNQYKTFYNNL-LNEEETINYPILN 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ ++ L++L + I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DRMEQLPVLSDLYQSIHQ--KCDTYDLYDNASYELQGIRSKISSTNQRIKQNLDKIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE +
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMS 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E ILS LT E+A+ E + + + ++ +ID A+A +A + G
Sbjct: 236 NQISRLKNDEAIERERILSALTVEVAE-EADACLISESIMGQIDFLTAKARYASSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + D ++ + HPLL ++ +N+ D+E
Sbjct: 295 PQFTK------DRTVYLPKAFHPLLDKQTV------VANTIEFAQDIE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++G+ +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ ++ SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDTTKNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++ + L + TTHY +L NA+ EF + TL PTY++L G G SNA
Sbjct: 434 ILDHVHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM-------EERRKLESQARTA 568
+I+K +G + K+IQ+A+ ++ + + +E+ SL E+R +L+ R A
Sbjct: 494 DISKKLGLNMKVIQKAKSMI-----GQDEQEINEMIASLESNSKRVDEQRIELDYLLREA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
H + Y + ++ K L A K K Q+V+ A + D ++++ +LRD
Sbjct: 549 QDTHDALAKQYEQYQNHEKQLMNEA---KEKANQRVKS----ATKEADDILKELR-ELRD 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + + DD + + ++ G++V V + G
Sbjct: 601 QKGAD----VKEHE----LIDKKKQLDDQYEAKSLKQNVQKKKWDEINAGDEVKVLTYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D++ +VQ G +++++ P+ + ++ P ++E+RQS
Sbjct: 653 K-GEVLELI-DNNEAVVQMGIIKMKL------PLEDLEKTKKTKSEPTKMIKRENRQS-- 702
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
K LDLRG R +EA +D L A + +++IHG GTG
Sbjct: 703 ----------------IKMELDLRGYRYDEAMVAVDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V L+ H VA Y P +G TV IK
Sbjct: 747 LQKGVQNHLKRHKSVASYRNGMPSEGGFGVTVVEIK 782
>gi|373107351|ref|ZP_09521650.1| MutS2 family protein [Stomatobaculum longum]
gi|371651181|gb|EHO16615.1| MutS2 family protein [Stomatobaculum longum]
Length = 788
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 253/831 (30%), Positives = 404/831 (48%), Gaps = 100/831 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQL 59
+ HA+V +P E ++ +T AAL+ ++ + L LS + D++ + G
Sbjct: 30 LCHALVPMTDLP------EIERAQAETEAALSRIRMKGELRLSGLRDVSASVKRLDVGGT 83
Query: 60 LSPSEICAVRRTL----RAVNNVWKKLTEAAELDGDSLQ-RYSPLLELLKNCNFLTELEE 114
LS SE+ A+ L RA N E AE D D+L+ ++ L L K +
Sbjct: 84 LSTSELYAISTLLDLSERARNYGAH---EEAEPDPDALEASFTALSPLPKE-------KR 133
Query: 115 KIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKR 174
++ CI + L+ D AS +L IR + K E + S L++ + + ++T R
Sbjct: 134 ELKHCILSEELVA-DTASAELSRIRRQMKTADERMHSALQEEINR--HKSYLMDTIVTMR 190
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
C+ +K+ +K LP G+ + SS+G+T F+EP AV NN L +E E T IL
Sbjct: 191 NGSYCLAVKSEYKSKLP-GVVHDQSSTGSTVFIEPLVAVRLNNEYRELVIAEQQEITKIL 249
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+A + + + +D FA+A A M P+ +++ V I+
Sbjct: 250 AALSALLTPCTAALLANQKILAALDFVFAKARLASSMQASKPLFNTERIV------EIKD 303
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ P D VPI I++ + ++
Sbjct: 304 GRHPLI----------------P-------------------RDKVVPISIRIGEDFTLL 328
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
+ITGPNTGGKT S+KT+GL +LM +AGL++PA RL F + ADIGD QS+EQ+LST
Sbjct: 329 IITGPNTGGKTVSLKTMGLFTLMGQAGLHIPAFQGSRLAVFRDVFADIGDEQSIEQSLST 388
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FSGH+ +V+IL ++L L DE+G+GTDP+EG ALA +IL +L++ V TTHY+
Sbjct: 389 FSGHMKNVVEILASADSDALCLFDELGAGTDPTEGAALAIAILSFLQNIGARTVATTHYS 448
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L ENA+ EF + TLRPTYR+L G G SNA I+K +G II+ A+
Sbjct: 449 ELKVYALSTKGVENASCEFDVATLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEEAKTH 508
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
+ E+ +L L +RR +E++ + + EI +L E ++LD R
Sbjct: 509 I-----EQNDAAFEDLLTRLEADRRTIEAERKEILAYRTEIEELKTRHEKADQNLDERKE 563
Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP 654
+ K + ++ L AK D ++ N+L SAD + L++E E + E +
Sbjct: 564 RILEKARAEAERILAEAKESADQSIRRI-NRL---SAD--SGLLRELEKERTGLRERLKA 617
Query: 655 DDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
+ + + + P G+ V V S+ D A V +P ++ + V+ G +R +V
Sbjct: 618 VEKTAPKKEAVKAAKPAVLHIGDSVRVLSM-DHDAIVSTLPDKNNRLFVRMGVLRTQVSA 676
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
+++ I + AA+ K + SG+A + + + P + +L G V
Sbjct: 677 DDVVLI----EEEAASA-----KGAKRGYSGAAPTFGKASHISPEI-------NLIGKTV 720
Query: 772 EEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
+EA +LD L A + + VIHG GTG +K+ VL L+ P V K+E
Sbjct: 721 DEALGELDKYLDDALLAHLNSVRVIHGRGTGALKKGVLAWLKKQPYVKKFE 771
>gi|160945171|ref|ZP_02092397.1| hypothetical protein FAEPRAM212_02690 [Faecalibacterium prausnitzii
M21/2]
gi|158442902|gb|EDP19907.1| recombination and DNA strand exchange inhibitor protein
[Faecalibacterium prausnitzii M21/2]
Length = 804
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 250/817 (30%), Positives = 384/817 (47%), Gaps = 139/817 (17%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLE 101
+E ++ + AV G +LS E+ V LR ++ W G S P +
Sbjct: 68 VEGVSQLAARAVKGGVLSMGELLMVAGALRNFQHLSSWY---------GSSEHDAMPTDD 118
Query: 102 LLKNCNFLTELEEKIGFCI---DCKLLIILDRASEDL-EL---IRAERKRNMENLDSLLK 154
L LE++I I D + D AS L EL IRA + L+S+++
Sbjct: 119 LFYALAPEPGLEQQISSAILAPDA----MADTASRTLAELRKKIRATENSIRDRLESMVR 174
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ + + + +++ R R V +K+ ++ + GI +VSS+GAT F+EP+ VE
Sbjct: 175 NMDTSKY----LQESVVSMRNGRYVVPVKSEYRGEV-SGIIHDVSSTGATVFVEPQAVVE 229
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
N ++ E E IL TA++A E + +Y +LEID+ A+A A +
Sbjct: 230 ANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLEIDILLAKARLALELKAF 289
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P V DSS N+ +HPL+ +P K
Sbjct: 290 KPA------VRTDSSFNLIRARHPLI---------------DPQKC-------------- 314
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
VP+DI + E ++ITGPNTGGKT ++KT GL M++ G +PA +
Sbjct: 315 ------VPVDIALGGEYDSLIITGPNTGGKTVTLKTAGLLCAMAQCGFLIPADERSEICV 368
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
FD L DIGD QS+EQ+LSTFSGH+ +I ILEL +LVL+DE+G+GTDP+EG ALA
Sbjct: 369 FDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLLDELGAGTDPAEGAALAV 428
Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
+I++ LR R L + TTHYA+L + NA+ EF LETLRPTY++ G G SNA
Sbjct: 429 AIIEELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLETLRPTYKLSVGVPGKSNA 488
Query: 515 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 574
I++ +G ++I+ AQ Q L E ++L++ L +
Sbjct: 489 FLISEKLGIPSRVIEAAQ-------------------QHLSAEDKRLDAVLGQLDDLKLQ 529
Query: 575 IMDLYREIEDEAKDLDRRAAH-LKAKE------TQQVQQELNFAKVQIDTVVQDFENQ-- 625
+ +E ++E + L A+H L+A QQ + EL A+ + T+ Q E Q
Sbjct: 530 L----KESQNEVEQLRNEASHQLEAARKKRDELIQQGENELEAARAKARTLAQQVETQAY 585
Query: 626 -----LRDASADEINS-----------LIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
LR DE S KE+E A H P F
Sbjct: 586 ALTDELRQLQKDERMSAQQKAQRAREIAKKETEKLFAGTEVVHNP----------VKEFV 635
Query: 670 P----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
P + G++V + L ++LATV+ +P + VLV+ G ++ +V ++ P K +
Sbjct: 636 PLKDVKVGQEVCIAEL-NQLATVLALPDKNGDVLVRAGIIKTKVPLKGLKQ-PEKLVKES 693
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ-TSKNSLDLRGMRVEEASHQLD--IAL 782
AP+ + QQ R S G +N RVQ T+K +L G+ V+EA ++D I
Sbjct: 694 T--APKTKAQQ--RYSRLTGDTNRPNGRVERVQRTAKMECNLLGLTVDEALSEVDSFIDR 749
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A ++V+++IHG GTG ++ + + LR + V +
Sbjct: 750 AILNGQTVVYLIHGNGTGALRTAIHKHLRGNRMVKSF 786
>gi|342216985|ref|ZP_08709632.1| recombination and DNA strand exchange inhibitor protein
[Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587875|gb|EGS31275.1| recombination and DNA strand exchange inhibitor protein
[Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 786
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 217/688 (31%), Positives = 332/688 (48%), Gaps = 109/688 (15%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
L+T R R + +K +K + G+ + SSSGAT F+EP VE NN L N E E
Sbjct: 184 LVTIRAGRYVIPVKQENKSSI-KGLIHDTSSSGATVFIEPLAVVELNNQLRELENKERQE 242
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL L+ ++A++ +K ++E+D FA+ A + P +S + + D
Sbjct: 243 IHRILQELSDQLAENLPALKQNNYAMVELDFIFAKGRLALEEKAIKPRISQEKKLKIDQG 302
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
+HPLL +P K VPID+ +
Sbjct: 303 ------RHPLL---------------DPRKV--------------------VPIDLDLGY 321
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
E + ++ITGPNTGGKT S+KT GL LM++AGL++PA + +P I ADIGD QS+E
Sbjct: 322 EFKSLIITGPNTGGKTVSLKTTGLLILMAQAGLFVPAGPNTVIPLVHEIYADIGDEQSIE 381
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
QNLSTFS H+ IVDIL ++ + LVL DE+G+GTDP+EG ALA +I+ +R+R L +
Sbjct: 382 QNLSTFSSHMVNIVDILSKITDQDLVLFDELGAGTDPTEGAALAMTIIDKMRERGILTMA 441
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY L + NA EF LETL PTY + G+ G SNA I++ +G IQ
Sbjct: 442 TTHYNQLKVYALETPGVANAGMEFDLETLSPTYHLRIGTPGKSNAFEISRRLGLGEDYIQ 501
Query: 530 RAQKLVERLRPERQQHRKSELYQSLME----ERRKLESQARTAASLHAEIMDLYREIEDE 585
A+ + H S ++ ++E ER+ L + + + EI L ++ E
Sbjct: 502 AAKSFI---------HSDSLKFEDVLEGLERERQDLSRKNQAEEAKQREIEALKARLQRE 552
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN--------------QLRDASA 631
+ +R+ + + ++ ++ L AK Q D + + ++ Q R+
Sbjct: 553 VEKSERQRDRILDQANEKAEKILREAKEQADLALLELKDIQASVASQEEKRLQQTRNYLG 612
Query: 632 DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 691
+ + SL K+++ + I + RP +D V G+ V KSL K V+E+
Sbjct: 613 ENLRSLSKKNKKGL-VIEKVARPIEDVKV------------GDTVFSKSLQQK-GQVLEL 658
Query: 692 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 751
P VLVQ G +++ + P+ N Q+E R G ++
Sbjct: 659 PDKQGNVLVQLGILKMSL------PV---------NSLTYAESQEEAR-----GRVQTKS 698
Query: 752 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 809
+ + K LDLRG EEA QL+ I A S + +IHG GTG ++E+V
Sbjct: 699 MISKKSKNFKTELDLRGQTFEEAKSQLEKYIDDAYLSGMSSVRIIHGKGTGALREKVRNF 758
Query: 810 LRNHPRVAKYEQESPMN---YGCTVAYI 834
L+++ V K E ++ MN YG T+AY+
Sbjct: 759 LQHYQPVKKIE-DAKMNEGGYGVTIAYL 785
>gi|168179617|ref|ZP_02614281.1| MutS2 family protein [Clostridium botulinum NCTC 2916]
gi|226950552|ref|YP_002805643.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A2 str. Kyoto]
gi|421835524|ref|ZP_16270271.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001627]
gi|254766595|sp|C1FKL4.1|MUTS2_CLOBJ RecName: Full=MutS2 protein
gi|182669561|gb|EDT81537.1| MutS2 family protein [Clostridium botulinum NCTC 2916]
gi|226843815|gb|ACO86481.1| MutS2 family protein [Clostridium botulinum A2 str. Kyoto]
gi|409742817|gb|EKN42043.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001627]
Length = 788
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 239/813 (29%), Positives = 399/813 (49%), Gaps = 90/813 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A G L P ++ + L
Sbjct: 39 SMYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKGSALLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150
Query: 133 EDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
EL ++L E+ K E AR A +L E ++ E++ + L + + ++ + +
Sbjct: 518 ELIENLQEKSIKAEEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARREAKNII 577
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
AK + D +++D R + + ++E + +++ + +V E
Sbjct: 578 KEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHEGEALKN 637
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+
Sbjct: 638 VKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKD------------ 680
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
LR + + S+ + ++ ++S+DLRGM EEA + +D L A
Sbjct: 681 ---LRAAKGSNSNNSSSKIKKSKKLNLNLRRVESSVDLRGMDAEEAIYTVDKYLDEAYLG 737
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ ++HG GTGV+++ ++++L+ H V KY
Sbjct: 738 GLGEVTIVHGKGTGVLRKTIMDMLKGHSHVKKY 770
>gi|78778605|ref|YP_396717.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9312]
gi|78712104|gb|ABB49281.1| MutS2 family protein [Prochlorococcus marinus str. MIT 9312]
Length = 803
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 260/859 (30%), Positives = 422/859 (49%), Gaps = 120/859 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQ 58
MG + +IP E +++LLN+T + + + + S + DI+ + G
Sbjct: 41 MGKRAILSFKIP--SEYEVAKRLLNETVEITELENNLEKSISFSGVCDISRNIEICSKGG 98
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIG 117
++ SE+ + T+ A N+ K L LD + S + L+ + N T L K G
Sbjct: 99 VILSSELLEIAITISAARNLKKIL-----LDFEKRPFISSFTKNLIDHHNIETIL--KNG 151
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL------- 170
+ + I D AS L ++R E L KK+ +I I K L
Sbjct: 152 IESNGR---ISDDASSKLSILRKEL---------LSKKLERKILVDKFIQKNLAYLQDTI 199
Query: 171 ITKRRSRMCVGIKASH--KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
I R R + +K ++ K+ GI + SSSG T + EP V N L A
Sbjct: 200 IGDRYGRPVLAVKVNYIDKF---KGIIHDSSSSGNTVYFEPDSVVTKGNKIASLEARIAA 256
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
EE +L + I+ + + + +L ++ A R+ +++W+ G PI +S
Sbjct: 257 EEFKLLQKWSQVISDNSENLIAMASILLRLENALTRSRYSKWIGGKTPIFEENPIIS--- 313
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
+ G HPLL+ EN + KG S PV +D ++
Sbjct: 314 ---LIGFSHPLLIW--------------------ENKK-------KG-SPPPVAVDFQIN 342
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+VV ITGPNTGGKTA++K LGL+ LM++AGL +P+ N+P +P+ I DIGD+QSL
Sbjct: 343 RNIKVVAITGPNTGGKTAALKGLGLSLLMARAGLLIPSTNNPIIPFCPNIYVDIGDNQSL 402
Query: 409 EQNLSTFSGHISRIVDILELVSRE---SLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
E+NLSTFSGHISRI +ILE + S+VL+DEIGSGTDP EG ALA ++L+ ++
Sbjct: 403 EENLSTFSGHISRIKEILESLDNRRGLSVVLLDEIGSGTDPLEGSALAMALLKEFANKSD 462
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ + TTHY D+ LK D+RFEN + F ++L+P Y + WG G SNAL+I+K IG +
Sbjct: 463 ITLATTHYGDIKALKYNDSRFENVSVAFDEDSLKPKYILNWGIPGRSNALSISKRIGLNE 522
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
I+ A L+P+ + S + + L EER K ++ A AA L A L+ E++
Sbjct: 523 SILNEAANY---LKPKEVDNINS-IIKGLEEERIKQQNSAEAAAELIARTEILHDELKRN 578
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKE 640
+ A ++ E ++ +++ AK + V D +LRD + + I +KE
Sbjct: 579 YEYQKINAEKIQEIERYKLSKKIISAKKE----VIDLIRKLRDQNVNGEDTRIIGKRLKE 634
Query: 641 SESAIAAIVEAHRPDDDFSVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
E+ + + + + S S+ P+ G+ V +KSL + +V++
Sbjct: 635 IET------------EHLTQKKVDKSISWNPKVGDFVKIKSL-NSTGQIVDLDKKGGFYE 681
Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 759
V+ G R + N+ I K P ++ + + + SS E+ S+ +V+T
Sbjct: 682 VKCGSFRSILSVNDFEGINGEK--------PNFKRSKIEIK-----SSREDFSFS-KVRT 727
Query: 760 SKNSLDLRGMRVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
SKN++D+RG+RV EA ++ + + L+++HG+GTG +K+ + + L V K
Sbjct: 728 SKNTIDVRGLRVHEAEIIIEEKIRKFHGP--LWIVHGIGTGKLKQGLRKWLSGLNYVDKI 785
Query: 820 EQESPMNY---GCTVAYIK 835
E ++ +N GC++A+IK
Sbjct: 786 E-DAALNEGGPGCSIAWIK 803
>gi|451817877|ref|YP_007454078.1| MutS2 protein MutS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451783856|gb|AGF54824.1| MutS2 protein MutS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 786
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 246/834 (29%), Positives = 423/834 (50%), Gaps = 109/834 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQ 58
G +V K + P+ E + KL T+ AL ++ S+ PL+ + D + A G
Sbjct: 27 GKDLVDKLE-PYNNLYEINNKL-EDTNEALEILISKGNPPLE--GLADTHEGIERAKKGG 82
Query: 59 LLSPSEICAVRRTLRA---VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNF-LTELEE 114
LSP ++ + LRA + +K+ D ++R P LE L + LEE
Sbjct: 83 TLSPEQLLRIGGMLRASRTMKEFFKR---------DEVERSYPRLEDLAYILVPVKTLEE 133
Query: 115 KIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLIT 172
+I I + I D+AS+ L IR R+++ +S +++ + I ++ + L T
Sbjct: 134 EIERAIVSEDEIS-DKASQTLYNIR----RSLKEKNSSVREKISSIVKSNSKYLQDDLYT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + +K+ +K +P G+ + SS+GAT+F+EP V NN L E AE
Sbjct: 189 MRGDRYVIPVKSEYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIER 247
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
ILS L++++ + + + ++E D FA+A +A ++ + PI V+ D + +I
Sbjct: 248 ILSELSSKVKLNGEQCLSNLKVLIEFDFIFAKAKYASALNAIKPI------VTEDGTFSI 301
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+HPL+ G D VP D+ + E
Sbjct: 302 LSGRHPLIAG-----------------------------------DKVVPSDVYLGKEFT 326
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
++ITGPNTGGKT ++KT+GL +M +GL +PA+++ + +F + ADIGD QS+EQ+L
Sbjct: 327 TLMITGPNTGGKTVTIKTVGLLHIMGLSGLLIPARDNSSIAFFTEVFADIGDEQSIEQSL 386
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
STFS H++ IV+I++ V +SLVL DE+G+GTDP+EG ALA SIL+ L++R + TTH
Sbjct: 387 STFSSHMTNIVEIMKHVDDKSLVLFDELGAGTDPTEGAALAVSILETLKNRGAKLIATTH 446
Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
Y++L K ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I+RA+
Sbjct: 447 YSELKAYAIKTEGVENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAK 506
Query: 533 KLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
+ + E L+ E L + L E+ + +AR A + E +L ++ E++ + LD
Sbjct: 507 EYISEENLQFEN-------LIRELQEKSIVAKQEAREAKIIKKEAEELKKKYEEKLEKLD 559
Query: 591 --RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
R A++ A+ ++ ++ ++ AK + D +++ + + ++E + A
Sbjct: 560 NTREKAYMDAR--REAKEIISEAKDEADEILKAMRELEKLGISGGGRHRLEEERKKLKAN 617
Query: 649 VEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
+E R + E + T G + + SL K+ ++ +P + V V+ G M++
Sbjct: 618 LE-EREKGIHNTKENEGEAITKVTLGMEALLPSLNQKV-IIISMPDNKGEVQVEAGIMKI 675
Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 767
VK +++ RK A ++R+++E + + S+ S +DLR
Sbjct: 676 NVKLSDL-------RKTKATKEEKVRRKREVKLNLSSVESR---------------VDLR 713
Query: 768 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
G+ EEA ++ D L A + + ++HG GTG++++ + ++L+ HP V Y
Sbjct: 714 GLDAEEACYKADKYLDDAYMANLGEVTIVHGKGTGILRKAINDMLKRHPHVKAY 767
>gi|314936676|ref|ZP_07844023.1| DNA mismatch repair protein MutS [Staphylococcus hominis subsp.
hominis C80]
gi|313655295|gb|EFS19040.1| DNA mismatch repair protein MutS [Staphylococcus hominis subsp.
hominis C80]
Length = 783
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 236/810 (29%), Positives = 384/810 (47%), Gaps = 106/810 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R ++ V N +K + + + +Y L
Sbjct: 65 LSGLSKVSPLIHRAKIGGVLNVTELNVIKRLIQ-VQNQFKTFYNQLLEEDEGVVKYPILN 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
E + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 124 ERMNQLPVLTDLYQEINE--KCDAYDLYDNASYELQGIRSKISSTTQRIRQNLDRIVKSQ 181
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + +IT R R + +KA ++ GI + S+SG T ++EP VE N
Sbjct: 182 ANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMN 236
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N RL N E E IL+ LT +A + + +ID A+A +A+ + G P
Sbjct: 237 NQISRLRNDEAVERERILTELTGLVAADDNNCLVAESVMGQIDFLTAKARYARSIKGTKP 296
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+ V ++ HPLL N + V + + I
Sbjct: 297 TFYKERTVYLPNAY------HPLL-----------------------NKDTVVANTIEFI 327
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F+
Sbjct: 328 DDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVFE 375
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ DIGD QS+EQ+LSTFS H+ IV+IL+ + SLVL DE+G+GTDPSEG ALA SI
Sbjct: 376 NVYCDIGDEQSIEQSLSTFSSHMKNIVEILKETDKNSLVLFDELGAGTDPSEGAALAMSI 435
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L ++RD L + TTHY +L NA+ EF + TL PTY++L G G SNA +
Sbjct: 436 LDHVRDIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFD 495
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+K +G II +A+ ++ E S++E LE ++ E+
Sbjct: 496 ISKKLGLGLNIINKAKTMIGTDEQE---------INSMIE---SLEKNSKRVDEQRIELE 543
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA--DEI 634
L RE DL+R+ K E + + + + A +I + ++ ++ L+D D+
Sbjct: 544 KLLREARTTHDDLERQYQQYKNYEQKLMDEAKDKANQRIKSATKEADDILKDLREMRDKK 603
Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVV 689
+ +KE E I + +D + + ++ G++V V S G K V+
Sbjct: 604 GADVKEHE----LIDKKKHLEDQYEAKSLKQNVKKQKWDDIHAGDEVKVLSYGQK-GEVL 658
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
E+ G+ + + VQ G +++++ PI + ++ P +++R
Sbjct: 659 ELSGEHEAI-VQMGIIKMKL------PIEDLEKTKKKKEKPTKMVTRQNR---------- 701
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVL 807
QT K LDLRG R EEA LD I A + +++IHG GTG +++ V
Sbjct: 702 --------QTIKTELDLRGYRYEEAVGALDQYIDQAVLSNYEQVYIIHGKGTGALQKAVQ 753
Query: 808 EILRNHPRVAKYEQESPM--NYGCTVAYIK 835
L+ H V + P +G TVA +K
Sbjct: 754 NHLKKHKSVQSFRGGIPSEGGFGVTVAELK 783
>gi|312622156|ref|YP_004023769.1| muts2 family protein [Caldicellulosiruptor kronotskyensis 2002]
gi|312202623|gb|ADQ45950.1| MutS2 family protein [Caldicellulosiruptor kronotskyensis 2002]
Length = 787
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 236/800 (29%), Positives = 391/800 (48%), Gaps = 123/800 (15%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
E+I L + G L+P EI + + L+ + L+ Q +S L +
Sbjct: 68 FENILPSLKKSKLGATLNPQEILQIGKVLKLSYEMRTYLSYT--------QDFSFLESMK 119
Query: 104 KNCNFLTELEEKIGFCIDCKLLI---ILDRASEDLELIRAERKRNMEN-----LDSLLKK 155
K L L+E I ID L ILD AS L+ IR ++ R +EN L+S+++
Sbjct: 120 KR---LVNLKEVIS-RIDQTFLTPDEILDTASSKLKEIR-DKIRKLENKIRDELNSMIRD 174
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
Q F + +P+IT R ++ + +KA + + GI + S++GAT F+EP VE
Sbjct: 175 PKIQRF----LQEPIITIRGEKLLLPVKAEFRNEVK-GIIHDQSATGATLFVEPFVCVEI 229
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
+N L N E E IL +++ IA EI+ ++E+D+ F +A +A+ M+
Sbjct: 230 SNQIRILKNKEKEEIERILQEISSLIASYCEEIETSFYALVELDIVFTKAIWAKEMNASK 289
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI+++ IN++ +HPL+
Sbjct: 290 PIINASG------IINLKKARHPLIQ---------------------------------- 309
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
D VPIDI + + V++ITGPNTGGKT ++KT+GL L+ ++G+++PA L F
Sbjct: 310 -KDKVVPIDIHLGKDFDVLIITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIF 368
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+ Q+LSTFS H+ I++I + ++LVL+DEIG+GTDP EG ALA +
Sbjct: 369 QKIFADIGDDQSIVQSLSTFSAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAKA 428
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL+YL ++ + TTHY +L ++ RFENA+ EF ++TL+PTYR+L G G SNAL
Sbjct: 429 ILKYLSEKGSKVIATTHYGELKIFAQQENRFENASCEFDVKTLKPTYRLLIGIPGRSNAL 488
Query: 516 NIAKSIGFDRKIIQRA-----QKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTA 568
I+ ++G D+ I++ A QK + +R+ E +Q +K + ++ K E+QA A
Sbjct: 489 VISSNLGLDKGIVEMARGYLSQKTIDLDRIINEMEQKKKEAEENLELAQKLKHEAQALKA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF----EN 624
A E+E K + ++ K + ++ + ++ +I+ + +D EN
Sbjct: 549 A------------YEEEKKRFETERERIRKKAINEAKEIVERSQYEIENLFKDLRKLAEN 596
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
E+ +E E I +I + + + + S+T + + G++V+V+S D
Sbjct: 597 LKEKEVLKELEEKKREYERLIQSISQQEKQEAE---SKTKKTIQNLRLGQKVYVRSF-DA 652
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
V +P + VQ G M++ V ++I + + +D +
Sbjct: 653 EGFVESLPDSKGNLTVQIGIMKINVNLSDIEEV-----------------EGQDSKIYQI 695
Query: 745 GSSNEEASYGPRVQTSKN---SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 799
S N + KN S+D+RG ++A ++D L A + +IHG GT
Sbjct: 696 ASRN-------VIIKEKNIDMSIDVRGKTSDDAILEVDKYLDDAYTAGLKQVTIIHGKGT 748
Query: 800 GVVKERVLEILRNHPRVAKY 819
GV+++ + LR HP V +
Sbjct: 749 GVLRQAIRNFLRRHPHVKSF 768
>gi|410456530|ref|ZP_11310390.1| recombination and DNA strand exchange inhibitor protein [Bacillus
bataviensis LMG 21833]
gi|409927914|gb|EKN65039.1| recombination and DNA strand exchange inhibitor protein [Bacillus
bataviensis LMG 21833]
Length = 785
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 257/848 (30%), Positives = 395/848 (46%), Gaps = 131/848 (15%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EE +L +T A +++ + + LS DI + +V G +LSP E+ + T+ A
Sbjct: 40 FEEVVRLQTETDEAATVLRIKGNVPLSGTHDIRAHIKRSVIGGVLSPHELNQIASTIHAS 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ K+ E + L S L+E ++ LT+LE++I ID + LD AS+ L
Sbjct: 100 RQM-KRFIEDIAAERTEL---SILMEQVERIIPLTDLEQEIKHAIDESGEV-LDSASDLL 154
Query: 136 ELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
+R + + N E L+S+++ A + I +T R R + +K ++
Sbjct: 155 RTLRHQLRSNESRVREKLESMIRSSNASKMLSDAI----VTIRNDRFVIPVKQEYRGHY- 209
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + S+SG T F+EP+ V+ NN + E E IL+ L+A +A+ E E+K +
Sbjct: 210 GGIIHDQSASGQTLFIEPQVIVQLNNQLQDIRVKEQLEIDRILTELSANVAEYENELKVI 269
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
++ + +D FA+A F + + P+++++ +S + +HPL+
Sbjct: 270 VEILANLDFIFAKARFGKKIKASKPLMNNEGRISLYKA------RHPLI----------- 312
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
P+ V N DI + E +VITGPNTGGKT ++KTL
Sbjct: 313 -----PIDEVVAN-------------------DIMLGNEFTTIVITGPNTGGKTVTLKTL 348
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL SLM++AGL +PA + L FD + ADIGD QS+EQ+LSTFS H+ IVDIL V
Sbjct: 349 GLCSLMAQAGLQVPALDGSELAVFDAVYADIGDEQSIEQSLSTFSSHMVNIVDILNSVDF 408
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
SLVL DE+G+GTDP EG ALA SIL + R + TTHY +L NA+
Sbjct: 409 NSLVLFDELGAGTDPQEGAALAISILDEVHKRGARVIATTHYPELKAYGYNREGVLNASV 468
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
EF +ETL PTY++L G G SNA I+K +G +IQ A+ V SE
Sbjct: 469 EFDVETLSPTYKLLLGVPGRSNAFEISKRLGLSDWVIQAARSHV------------SEDT 516
Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
+ + LES R A E D ++ E DL ++ K+ +++ A
Sbjct: 517 NQIDKMIASLESSKRQAEEEQMEARDYLKQAEKLHLDLQKQMIEFYEKKDSMLEKAAEKA 576
Query: 612 KVQIDTVVQDFENQLRDASA--DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
+D Q+ E +RD E ++ IKE E +++A R D +
Sbjct: 577 ADIVDEAKQEAEQVIRDLRKMRTEKHAEIKEHE-----LIDAKRRLQDAA---------- 621
Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVL------------------VQYGKMRVRVKK 711
P+ + V++ + +K+ T +PGD+ VL VQ G ++++VK+
Sbjct: 622 PEIKKSVNLANKKNKMHTY--MPGDEVKVLTFDQKGTLLEKVSANEWQVQIGILKMKVKE 679
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
++ + P KQ E R A R K LDLRG R
Sbjct: 680 KDMEYM--------GTP-----KQVETRPM---------AIVQGRESVVKLELDLRGERY 717
Query: 772 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK--YEQESPMNY 827
E A +++ I A S + +IHG GTG +++ V E LRNH V K + +
Sbjct: 718 ENALLKVEKYIDDALLSSYPRVSIIHGKGTGALRQGVQEYLRNHRSVKKIRFGEAGEGGS 777
Query: 828 GCTVAYIK 835
G T+ K
Sbjct: 778 GVTIVEFK 785
>gi|421860087|ref|ZP_16292245.1| mismatch repair ATPase [Paenibacillus popilliae ATCC 14706]
gi|410830291|dbj|GAC42682.1| mismatch repair ATPase [Paenibacillus popilliae ATCC 14706]
Length = 785
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 257/841 (30%), Positives = 415/841 (49%), Gaps = 117/841 (13%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
EE ++ L T A+ + ++ P L+ ++DI G L A +LS +E+ + L A
Sbjct: 40 FEEVKRRLQATDEAMTVERLKGGP-PLAGVKDIRGALKRARIQAILSSTELWDISALLFA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
+ E + PLL+ L + + +LEE I CID + I LD+AS
Sbjct: 99 ARRTKHHIAAVHE------EEAIPLLQDLAETISDQKQLEEDIRQCIDEQGEI-LDQASF 151
Query: 134 DLELIRAERK----RNMENLDSLLKKV-AAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
+L IR E + R E L+++++ AA++ Q + LIT R R + +K ++
Sbjct: 152 ELAAIRRELRTGETRIREKLEAMIRTSNAAKMLQ-----EQLITIRNDRYVIPVKQEYRS 206
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSE 245
GI + S SGAT F+EP+ V NN L +++ EE I LS LT +
Sbjct: 207 HY-SGIVHDQSGSGATLFIEPEAIVAMNN---HLRETKLREEREIERILSRLTDRVGLIA 262
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
++Y V +D FA+A A+ M P ++ + + + HPL+
Sbjct: 263 DVLEYDTGAVETLDFMFAKARLAREMKASLPRMNDRGFLKLRQAC------HPLI----- 311
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
P +D VPI +++ +++TGPNTGGKT
Sbjct: 312 -----------P-------------------ADQVVPIHVELGNSYTSILVTGPNTGGKT 341
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL SLM+ +GL++PA++ ++ FD I ADIGD QS+EQ+LSTFS H++ I+ I
Sbjct: 342 VTLKTIGLLSLMAMSGLFIPAEDGSQMCVFDTIYADIGDEQSIEQSLSTFSSHLTNIIRI 401
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDT 484
LE ++ +SLVL+DE+G+GTDP+EG ALA +IL+++ R+G +V TTHY++L +
Sbjct: 402 LEQMTPKSLVLLDEVGAGTDPAEGSALAIAILEHIH-RLGCRMVATTHYSELKAYAYERK 460
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
NA+ EF ++TLRPTYR+L G G SNA IA+ +G + II A+ V +
Sbjct: 461 GVINASMEFDVQTLRPTYRLLIGVPGRSNAFAIAERLGLPKSIIDHARGEV-----TEED 515
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEI----MDLYREIEDEAKDLDRRAAHLKAKE 600
R + SL + R K E++ TA+ L ++ L RE+E + D ++R A + K
Sbjct: 516 MRVETMIASLEDNRLKAEAERETASKLRMDLEAMQQKLTRELEKQEADREKRQAQAEEKA 575
Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 660
V + A+ Q ++ D QL + ++ E+ + + P+ +
Sbjct: 576 RAIVDK----ARRQAQEIIADL-RQLAMEGVEVKEHMLTEARKRL----DEAAPEAKLAA 626
Query: 661 SETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
+ + G+ V V SL K +VVE G++ +VQ G M+++V +++ +
Sbjct: 627 KPKRQAKPARRIEAGDDVRVYSLNQK-GSVVEFVGEE--AVVQLGMMKMKVPLDDLELL- 682
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
S K+AA QSG +N + + G T ++ LDLRG +EEA ++
Sbjct: 683 -SSVKSAAKAV----------QSG----TNVKRTRG---DTIRSELDLRGANLEEALMEV 724
Query: 779 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYI 834
D L A + +++IHG GTG+++ + E LR H V + G TVA +
Sbjct: 725 DRFLDEALIGNLGQVYIIHGKGTGILRSGIQEFLRKHKHVKSFRLGDFGEGGTGVTVAEL 784
Query: 835 K 835
K
Sbjct: 785 K 785
>gi|326791035|ref|YP_004308856.1| MutS2 protein [Clostridium lentocellum DSM 5427]
gi|326541799|gb|ADZ83658.1| MutS2 protein [Clostridium lentocellum DSM 5427]
Length = 797
Score = 282 bits (721), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 258/845 (30%), Positives = 393/845 (46%), Gaps = 113/845 (13%)
Query: 17 LEESQKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LEE + L +T+ A+ + ++ + L T++ + IL G +LS E+ A+R LR
Sbjct: 40 LEEVKTLQKETAEAIHISIKQGKMPLGTLKAVKPILKHIDIGAILSAGELLAIRDVLRLT 99
Query: 76 ---NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
N ++ E+ Y + + T LE +I CI I D+ +
Sbjct: 100 RQGKNYYQDAIATGEV-------YPSIGGYFEGLTPFTTLEREISRCI-----IAADQFA 147
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKY 188
+D A ++ M++L +K+V + + I P++T R+ R C+ IK +K
Sbjct: 148 DDATPELAHIRKQMKSLGVKIKEVLQNMIHSSHYQDMIQDPVVTLRQDRYCIPIKIEYKS 207
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
GI + SS+GAT F+EP VE N L E E +L LT +IA EI
Sbjct: 208 QF-KGIVHDQSSTGATVFIEPMAVVELGNALKSLEVKEQEEIEKLLIELTNQIAPITEEI 266
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ + +D FAR+ F+ D P L++Q ++ + +HPLL S+
Sbjct: 267 GRNYELLTLLDSIFARSEFSLRYDCREPRLNNQGYIFLKKA------RHPLLAKESV--- 317
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
VPIDI V + ++ITGPNTGGKT ++
Sbjct: 318 --------------------------------VPIDIYVGKDFTTLLITGPNTGGKTVTL 345
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL SLM+ GL +PA + F+ I AD+GD QS+EQ+LSTFS H++ IV IL+
Sbjct: 346 KTIGLFSLMAAIGLQIPAAEGSEMAIFEGIYADLGDEQSIEQSLSTFSAHMTNIVSILKD 405
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
+S SLVL+DE+GSGTDP EG ALA +IL++LR + V TTHY++L EN
Sbjct: 406 MSLNSLVLLDEVGSGTDPVEGAALAMAILEHLRKQQIRTVATTHYSELKLYALSTDGVEN 465
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +E+LRPTYR+L G G SNA I+ +G +I A ++ +++ +
Sbjct: 466 ASCEFDVESLRPTYRLLIGVPGKSNAFAISMKLGLPEYLIDEA-----KVYLQKENVKME 520
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD--------LDRRAAHLKAKE 600
++ L + +R E + A + E L EI++E K L+R A LKAKE
Sbjct: 521 DILVDLEQSKRLAEMERERAKAFRDEAEHLKEEIQNERKKLEKAKKKVLER--AELKAKE 578
Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASA--DEINSLIKESESAIAAIVEAHRPDDDF 658
L A+ + D V+++ R A A DE SL + + H+
Sbjct: 579 I------LKTAEAETDKVLKEVRAVARKAQATIDE-QSLYNAKKRMSDTVSAQHKRVGKV 631
Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
+ + + GE+V V SL K VV D + G + VRV +R IP
Sbjct: 632 VGRQEKVALKAVEVGEEVMVTSLMQK--GVVTAAAD------RSGNVEVRVGIMPMR-IP 682
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG-PRVQTSKNSLDLRGMRVEEASHQ 777
S RL ++ + + + + SY + T +D+RGM V+EA
Sbjct: 683 LSG-------LTRLEEEIQVAKKQEKKKTKGQVSYHMNKTSTISTQVDVRGMMVDEAWPV 735
Query: 778 LDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY-----GCT 830
+D L A + +IHG GTG ++ + + L+ HP V + + P Y G T
Sbjct: 736 VDKYLDDAYLSGLKQVTIIHGKGTGALRSGITQKLKRHPHV---QDQRPGLYGEGEMGVT 792
Query: 831 VAYIK 835
V IK
Sbjct: 793 VVTIK 797
>gi|410727381|ref|ZP_11365601.1| MutS2 family protein [Clostridium sp. Maddingley MBC34-26]
gi|410598971|gb|EKQ53532.1| MutS2 family protein [Clostridium sp. Maddingley MBC34-26]
Length = 786
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 248/839 (29%), Positives = 413/839 (49%), Gaps = 119/839 (14%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQ 58
G A+V K + P+ E + KL +T AL ++ ++ PL+ + DI + A G
Sbjct: 27 GKAMVDKLE-PYDNMYEINNKL-EETDEALEILITKGNPPLE--GLADIHEGIERAKKGG 82
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLT-EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
LSP ++ V LRA + + E AE + Y L +L + LE +I
Sbjct: 83 TLSPEQLLKVGGMLRAARTMKEFFKREEAE------KAYPRLEDLAYILVPIKALEAEIE 136
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRR 175
I + I D+AS+ L IR R+++ +S +++ I ++ + L T R
Sbjct: 137 RAIVSEDEIS-DKASQTLYNIR----RSLKEKNSSVREKIGSIVRSNSKYLQDDLYTMRG 191
Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
R + +K+ +K +P G+ + SS+GAT+F+EP V NN L E AE ILS
Sbjct: 192 DRYVIPVKSEYKSQVP-GLVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIERILS 250
Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
L+ ++ + E + ++E D FA+ +A ++ V PI V D +I
Sbjct: 251 ELSLKVKNNSDECLSNLKVLVEFDFIFAKGRYASSLNAVKPI------VRDDGVFSILSG 304
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
+HPL+ P D VP D+ + E + ++
Sbjct: 305 RHPLI---------------EP--------------------DKVVPSDVYLGEEFQTLM 329
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KT+GL +M +GL +PAK++ + F I ADIGD QS+EQ+LSTF
Sbjct: 330 ITGPNTGGKTVTIKTVGLLHIMGLSGLLIPAKDNSSIALFTEIFADIGDEQSIEQSLSTF 389
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
S H++ IV+I++ V +SL L DE+G+GTDP+EG ALA SIL+ LR+R + TTHY++
Sbjct: 390 SSHMTNIVNIMKHVDDKSLALFDELGAGTDPAEGAALAVSILETLRNRGAKLIATTHYSE 449
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L K ENA+ EF +ETL+PTYR+L G G SNA I+K +G +I+RA+
Sbjct: 450 LKAYALKTEGVENASVEFDIETLKPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAK--- 506
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRA 593
E + E Q L + L E+ + +AR A L + +L R+ E++ + L+ R
Sbjct: 507 EYMSEENLQF--ENLIRDLQEKSIIAKKEAREAKMLRDQAEELKRKYEEKLEKLEQTREK 564
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFEN-----------QLRDASADEINSLIKESE 642
A++ A+ ++ ++ + AK + D +++ Q + ++ ++E E
Sbjct: 565 AYMDAR--REAKEIIANAKDEADDILKAMRELEKLGIGSGGRQRLEEERKKLKESLEEKE 622
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
I + E + + +F P ++V + S+ P + V V+
Sbjct: 623 KGIHKMKENE--GEVITKVTLGMEAFLPSLNQKVIITSM----------PDNKGEVQVEA 670
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G M++ VK ++R ++ + ++R+++E + + S+ V+T
Sbjct: 671 GIMKINVKLKDLRKTQETREE-------KVRRKREVKLNLSS------------VET--- 708
Query: 763 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+DLRGM EEA ++ D L A + + ++HG GTGV+++ + ++L+ HP V Y
Sbjct: 709 RVDLRGMDAEEACYKADKYLDDAYRANLGEVTIVHGKGTGVLRKAINDMLKRHPHVKSY 767
>gi|423683336|ref|ZP_17658175.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis WX-02]
gi|383440110|gb|EID47885.1| recombination and DNA strand exchange inhibitor protein [Bacillus
licheniformis WX-02]
Length = 785
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 253/838 (30%), Positives = 407/838 (48%), Gaps = 107/838 (12%)
Query: 15 KSLEESQKL---LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
+SLEE +KL +++ L + S P + DI L A G +LSP+E+ +
Sbjct: 38 RSLEEVKKLQEEVDEAGTVLRLKGSAPF--GGLTDIRKALRRAEIGSILSPAELTEISGL 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
L A + K E DG + E L L+ELE I CID + LD A
Sbjct: 96 LYAAKQM-KHFLEGLFEDGVEIPYLHQYAEKLIP---LSELERDINSCIDDHGEV-LDHA 150
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
SE L IR + + R + L+S+L+ +AQ + +IT R R + +K ++
Sbjct: 151 SETLRGIRTQLRTLESRIRDRLESMLRSSSAQKM----LSDTIITIRNDRFVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + SSSGAT F+EP+ V+ NN + +E E IL +LT + A+ E
Sbjct: 207 SSY-GGIVHDQSSSGATLFIEPQAIVDMNNALRQAKVNEKQEIERILRVLTEKTAEHTNE 265
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + + + +D FA+A +A+ V P +++ +V + +HPLL
Sbjct: 266 LFHDVKVLQTLDFIFAKAKYAKATKAVKPAVNADGYVRLIQA------RHPLL------- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
PL D VP DI++ E +VITGPNTGGKT +
Sbjct: 313 ---------PL-------------------DEVVPNDIELGGEYTTIVITGPNTGGKTVT 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGL ++M+++GL++PA+ FD + ADIGD QS+EQ+LSTFS H+ IVDIL+
Sbjct: 345 LKTLGLLTMMAQSGLHVPAEEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILK 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
++ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L
Sbjct: 405 DMTENSLVLFDELGAGTDPQEGAALAISILDEVCQTGARVIATTHYPELKAYGYNRENVI 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ++TL PTY++L G G SNA I+K +G +I RA + + +
Sbjct: 465 NASVEFDIDTLSPTYKLLIGVPGRSNAFEISKRLGLPDYLIGRA-----KAEMTAEHNEV 519
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+ SL + +++ E++ + ++ AE L+R+++ + + L + Q+ ++
Sbjct: 520 DTMIASLEDSKKRAEAELKETEAIRAEAEALHRDLQQQISEWQEIKDKLYEEAEQKAAEK 579
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETN 664
+ A + D ++Q D A + + LI K E A+ + +A +P + +T+
Sbjct: 580 VKAAMKEADDIIQSLRMIKEDHKAFKDHELIEAKKRLEEAVPSFEKAKKP----AQKKTD 635
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P G++V V + G K T++E G + VQ G ++++VK+ ++ + K+
Sbjct: 636 KRELKP--GDEVKVLTFGQK-GTLLEKTGAAEWN-VQIGILKMKVKEKDLEFL-----KS 686
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----D 779
A P ++Q A A G S LDLRG R E A H++ D
Sbjct: 687 APEP---------EKQKTIA------AVKGKDYHVSLE-LDLRGERFENALHRVEKYLDD 730
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L++H V +++ + G T+ +K
Sbjct: 731 AVLAGYPRVS---IIHGKGTGALRKGVQDLLKSHRNVKNSRFGEAGEGGSGVTIVELK 785
>gi|299535519|ref|ZP_07048840.1| MutS2 protein [Lysinibacillus fusiformis ZC1]
gi|424739203|ref|ZP_18167624.1| MutS2 protein [Lysinibacillus fusiformis ZB2]
gi|298728719|gb|EFI69273.1| MutS2 protein [Lysinibacillus fusiformis ZC1]
gi|422946841|gb|EKU41246.1| MutS2 protein [Lysinibacillus fusiformis ZB2]
Length = 788
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 247/829 (29%), Positives = 394/829 (47%), Gaps = 115/829 (13%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
Q F K ++ LL + L++++ + + + I D+ A G +L+ E+ +
Sbjct: 38 QTDFAKVVQ----LLEEMDEGLSILRVKGNVPMGGIFDVRPSARRAQIGGMLAAVELMEI 93
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
T+RA + + + E +L+ D + + + LT L+ +I CID +L
Sbjct: 94 SSTIRA-SRILRNFIE--DLEADEVIDIPHFISKKEAMPVLTGLQHEINNCIDDNG-AVL 149
Query: 129 DRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
D AS+ L IR AE + L+SL++ A A + L+T R R + +K
Sbjct: 150 DSASQTLRSIRQSLRAEEGKVRSKLESLIRGSNA----AKMLSDTLVTIRNDRFVIPVKQ 205
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+++ GI + SSSG T F+EP V+ NN RL E AE IL L+A + +
Sbjct: 206 EYRHHY-GGIVHDQSSSGQTLFIEPDSVVQANNEIHRLKMKEQAEIERILLALSAMVQEV 264
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
++ L+ + +ID+ A+ + Q P ++ D I + +HPLL
Sbjct: 265 ASDLFNLVKVLGDIDVILAKGKYGQANKCTMPKMNQ------DGYIRLIRARHPLL---- 314
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P+ D +P DI+ + +VITGPNTGGK
Sbjct: 315 ------------PI-------------------DSAIPNDIEFGKDITAIVITGPNTGGK 343
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT+GL +LM++AGL +PA + L F+ + ADIGD QS+EQ+LSTFS H+ IVD
Sbjct: 344 TVTLKTVGLCTLMAQAGLPVPALDGSELAVFEQLFADIGDEQSIEQSLSTFSSHMVNIVD 403
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
IL+ ESLVL DE+G+GTDP EG ALA SIL + R + TTHY +L
Sbjct: 404 ILQKFDHESLVLFDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRP 463
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
NA+ EF +ETL PTYR+L G G SNA I+ +G II RA+ R
Sbjct: 464 GVANASVEFDIETLSPTYRLLIGVPGRSNAFEISSRLGLPESIIDRAKGFTGTDR----- 518
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
H + SL E RR+ E A + +L E L +E++D+ + + R L K ++
Sbjct: 519 HEVESMIASLEETRRQSEDDAERSHALLLESETLRKELQDKLQAYEERKEALDKKAKEKA 578
Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR------PDDDF 658
++ ++ AK + + ++ + ++A + ++KE E ++EA + P +D
Sbjct: 579 RKIVDEAKREAEAIIAELREMRKNA-----DQVVKEHE-----LIEARKRLEEATPLEDN 628
Query: 659 SV----SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
V ++ + G++V V S G + T++E + + V VQ G +++++ +++
Sbjct: 629 KVLKKAAQVKARAQNLVVGDEVKVLSYGQR-GTLLEKVSNTEWV-VQMGILKMKISDSDL 686
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
I K P LR +AG N R K LDLRG R E+A
Sbjct: 687 EYIKPEKE-------PVLR---------TAGVKN-------RNSHVKLELDLRGERYEDA 723
Query: 775 ----SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+D AL R + +IHG+GTG +++ + L+ H RV +
Sbjct: 724 ILRTEKYIDDALLSNYGR--VSIIHGVGTGALRQGIQSYLKKHKRVKSF 770
>gi|433443934|ref|ZP_20409057.1| recombination and DNA strand exchange inhibitor protein
[Anoxybacillus flavithermus TNO-09.006]
gi|432001908|gb|ELK22775.1| recombination and DNA strand exchange inhibitor protein
[Anoxybacillus flavithermus TNO-09.006]
Length = 781
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 248/810 (30%), Positives = 393/810 (48%), Gaps = 108/810 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I D+ A G LSP E+ + T+RA + KK EA E D + Y+
Sbjct: 65 LGGIFDVRMQTKRASIGGTLSPHELLDIASTMRAARQL-KKFLEATEADLPHMIAYAA-- 121
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
L ELE++I CID + +LD AS+ L +R + + R + L+S+++
Sbjct: 122 ----QIVPLPELEQRIYHCID-ESGDVLDGASDRLRSLRQQLRTIEGRVRDKLESIIRSS 176
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+AQ + +IT R R + +K +++ GI + SSSGAT F+EP+ VE N
Sbjct: 177 SAQ----KTLSDAIITIRNDRYVIPVKQEYRHTY-GGIVHDQSSSGATLFIEPQSVVELN 231
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N +L E E ILS L+A + + I ++ + ++D FA+A +A+ + P
Sbjct: 232 NELQQLRVKEKQEIERILSELSASVGEQATTIIENVELLAQLDFLFAKAKYAKAIKATKP 291
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++ + ++ + +HPL+ P
Sbjct: 292 AINERGYIRLIQA------RHPLI----------------P------------------- 310
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
SD VP DI++ +VITGPNTGGKT ++KT+GL ++M++AGL +PA + +L F
Sbjct: 311 SDEVVPNDIELGSNYTTMVITGPNTGGKTVTLKTIGLFTVMAQAGLQVPALDGSQLAVFR 370
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ ADIGD QS+EQ+LSTFS H+ IVDIL+ V SLVL DE+G+GTDP EG ALA +I
Sbjct: 371 AVYADIGDEQSIEQSLSTFSSHMVNIVDILKQVDEHSLVLFDELGAGTDPQEGAALAIAI 430
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + +R V TTHY +L NA+ EF +ETL PTY++L G G SNAL+
Sbjct: 431 LDEVHNRGARVVATTHYPELKAYGYNRRGVMNASVEFDIETLSPTYKLLIGIPGRSNALD 490
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I++ +G D II RA+ + + + + SL + +++ E + A L E
Sbjct: 491 ISRRLGLDEHIIARARTYI-----SAESNEVENMIASLEQSKKRAEEEWEKAERLRHEAE 545
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEIN 635
L E+E + +L+ + L K +Q ++ + A D V+Q + Q + A+A + +
Sbjct: 546 QLRNELERQWNELNEQRDRLLEKAKEQAEEIVKKAMKTADEVIQHLRDMQKQQAAAIKEH 605
Query: 636 SLI---KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
LI K+ E AI I + ++ P G++V V L K + +V
Sbjct: 606 ELIEARKKLEEAIPQINTKKKKR-----AQQTKQPLHP--GDEVKVVHLNQKGQLIEKV- 657
Query: 693 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 752
D LVQ G ++++V + N++ + ++PAP + A+
Sbjct: 658 -SDKEWLVQIGILKMKVHEENLQYV--------SSPAPI--------------ETKPIAT 694
Query: 753 YGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVL 807
R LDLRG R E+A ++ D LA + S +IHG GTG +++ V
Sbjct: 695 VKGRDYHVPLELDLRGERYEDALLRVEKYIDDAVLAGYPRVS---IIHGKGTGALRKGVQ 751
Query: 808 EILRNHPRVA--KYEQESPMNYGCTVAYIK 835
+ L+NH V ++ + + G T+ +K
Sbjct: 752 QYLQNHRSVKSIRFGEATEGGTGVTIVELK 781
>gi|366166669|ref|ZP_09466424.1| MutS2 family protein [Acetivibrio cellulolyticus CD2]
Length = 793
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 234/790 (29%), Positives = 380/790 (48%), Gaps = 90/790 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L + DI + A G +L+P E+ V LRAV N L A D + +
Sbjct: 65 LGGVNDIRDSIRRAEIGSILNPGELIRVSGLLRAVRN----LKNYASGDNIRTGEDNVVG 120
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL-DSLLKKVAAQ 159
EL+ +E+KI CI + I D AS L IR + + ++ D L V +
Sbjct: 121 ELINCLEASKRVEDKINMCIVSEEEI-SDNASPALGNIRRQIRHAQNSIKDKLNDLVRSS 179
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+Q + + ++T R R V +K ++ +P G+ + S+SGAT F+EP VE NN
Sbjct: 180 KYQKY-MQESIVTLRGDRYVVPVKQEYRSEIP-GLVHDSSASGATLFVEPMAVVEANNTI 237
Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
L E E IL L+ ++++ +K ++ + ++D FA+A + + VCP L+
Sbjct: 238 RELKIKEQTEIERILQELSCDVSEISMGLKTNVELLAKLDFIFAKAKLSLDYNCVCPKLN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
+ +HPLL +P
Sbjct: 298 REGRTVIKKG------RHPLL---------------DP--------------------KI 316
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
VPID + E +V+TGPNTGGKT ++KT+GL +LM++AGL +PA + F +
Sbjct: 317 VVPIDFWIGDEFDTLVVTGPNTGGKTVTLKTVGLFTLMTQAGLQIPANEGTEISVFGKVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV+ILE V SLVL DE+G+GTDP+EG ALA +IL++
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMKNIVNILENVDSSSLVLFDELGAGTDPTEGAALAMAILEH 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
L++R V TTHY+ L ENA EF +ETL+PTY++L G G SNA I+
Sbjct: 437 LKERGCTIVATTHYSQLKVYAVTTPHVENACCEFDVETLKPTYKLLIGVPGRSNAFAISN 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G I++RA+ + ++ + ++ S+ + + ES+ R A L E +
Sbjct: 497 RLGLIDSIVERAKGYL-----TSEEIKFEDMLMSIEKNLNQSESEKRQAQVLKLEAEKIR 551
Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA----SADEIN 635
EIE++ K + R ++ + ++ ++ L AK + + ++ + R+ S E
Sbjct: 552 NEIEEQKKRFEDRKENIVKEAREEARRVLLDAKHEAENILSEMRRIQREKESSQSQKEAE 611
Query: 636 SLIKESESAIAAIVEA-HRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDKLATVVEV 691
+ + ++ I I EA +P + NT P+ G+ V + +L K TVV +
Sbjct: 612 DMRLKIKNKIDNIEEALSKP-----IIPRNTLVKPPKNLKPGDSVLIINLNQK-GTVVAL 665
Query: 692 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 751
P + +VQ G M++ + N++ I K Q + +G G S
Sbjct: 666 PDKNGEAIVQAGIMKINLHITNLKVIDEQK------------AQIKRTGAGEIGVS---- 709
Query: 752 SYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEI 809
+ + +DLRG+ +E+A +D L A + + +IHG GTG+++ + +
Sbjct: 710 ----KARNISTEIDLRGLNLEDALENVDKYLDDAVISGLAEVSIIHGKGTGILRSGIHQY 765
Query: 810 LRNHPRVAKY 819
L+++ RV Y
Sbjct: 766 LKSNKRVKSY 775
>gi|325288446|ref|YP_004264627.1| DNA mismatch repair protein, MutS family [Syntrophobotulus
glycolicus DSM 8271]
gi|324963847|gb|ADY54626.1| DNA mismatch repair protein, MutS family [Syntrophobotulus
glycolicus DSM 8271]
Length = 793
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 235/815 (28%), Positives = 388/815 (47%), Gaps = 93/815 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+ E + L +T A +++ PL + ++I + G +L P E+ ++ T+R
Sbjct: 42 IREVRNRLRETDEAKILLRFNPLFSVRGAKEIRPSVERCARGGILQPEELLEIKDTVRVA 101
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASE 133
V LTE + + +S L ++ LE++I CI D K I D+ASE
Sbjct: 102 RQVKNILTEDGTAKSNVAELFS-LRGIVSEVAPQKPLEDEISRCINEDGK---IDDKASE 157
Query: 134 DLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
DL IR +R + LD +++ A Q + +IT R R V +K +
Sbjct: 158 DLAKIRRMITGIHQRLKDVLDGIMRNPATQKM----LQDRVITTRGDRYVVPVKQEYGSA 213
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+GI + S+SGAT F+EP V+ N E E IL LTA +A EI
Sbjct: 214 F-NGIVHDQSASGATLFIEPAAVVQLGNELREAVLRENREVQRILQQLTAIVAVKVDEIA 272
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + +D A+A + M+ P++ ++ + + + +HPLL G
Sbjct: 273 ASFEALARLDFVLAKALLSDKMNAGSPLVLNKPQIKLNKA------RHPLLSGKV----- 321
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
VP+ I++ + ++VITGPNTGGKT ++K
Sbjct: 322 -------------------------------VPLSIELGEDFNILVITGPNTGGKTVTLK 350
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL S+M ++GL++PA++ +L F I DIGD QS+EQ+LSTFSGH+ IV I++
Sbjct: 351 TVGLMSVMMQSGLHIPAESDSKLGVFRKIFIDIGDEQSVEQSLSTFSGHLKNIVGIVKEA 410
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+SLVL DEIG+GTDP+EG ALA +I+ L DR + TTHY L ENA
Sbjct: 411 DDKSLVLFDEIGAGTDPAEGAALAMAIISELLDRGCRGIATTHYGTLKTFAYNTAGLENA 470
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF ETL PTYR++ G G SNA +IA+ +G + I+ A+ + ERQ + S+
Sbjct: 471 SVEFDPETLSPTYRLMIGIPGRSNAFSIAERLGLQKNILDLAKTYI----SERQM-KVSD 525
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYRE---IEDEAKDLDRRAAHLKAKETQQVQQ 606
L ++L E +R++E + E+ + RE I ++A+ +D + + K ++ +
Sbjct: 526 LLENLEETQREIEL---GKLKIQEELQKVTRENAQIAEKARLMDEKYEEIVQKAKEEAME 582
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
+ +K + + V+ + + ++ + + I+++ + + E + S
Sbjct: 583 IVRGSKHEAEKVILEIKEAQKEEQKKQ-QAAIEKARQGLKKLSEGLYSGKERSGGNLRPE 641
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G+ V++ +L K V+ P + V+VQ G +++ V + IR I +++
Sbjct: 642 QVKP--GQLVYLPNLRQK-GQVITKPDHNGEVVVQAGILKISVSISEIRIIDETRKAEHF 698
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
R GS G S + T ++ +DLRG V+EA LD L A
Sbjct: 699 EKTIR----------GSMGLS--------KAVTLRSEVDLRGRMVDEAEGILDKYLDDAV 740
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ + +IHG GTG ++ V + L+ HP V +
Sbjct: 741 LTGINQVSIIHGKGTGSLRNGVHQFLKRHPHVVSF 775
>gi|376260578|ref|YP_005147298.1| MutS2 family protein [Clostridium sp. BNL1100]
gi|373944572|gb|AEY65493.1| MutS2 family protein [Clostridium sp. BNL1100]
Length = 792
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 245/819 (29%), Positives = 395/819 (48%), Gaps = 108/819 (13%)
Query: 21 QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
+K+L++T+ ++ +++ L I DI L G +LSP E+ + LRA +
Sbjct: 44 EKMLSETNDGVSCVLKRGSPPLGGITDIRMTLKRLDMGGVLSPGELLRLAGVLRAARRLK 103
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + +LD + + L+ L++ LE+KI CI + I D AS L IR
Sbjct: 104 GYIND--KLDENKTNVVNELISCLESNQ---RLEQKIENCILSEDEIA-DNASPALSSIR 157
Query: 140 AERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ K + L+S+++ Q F I + ++T R R + +K HK +P G+
Sbjct: 158 RQIKEQQASIKDKLNSIIRSTKYQKF----IQESVVTMRGDRYVIPVKQEHKGDIP-GLV 212
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SGAT F+EP VE NN +L E E IL+ L+ + + ++ M +
Sbjct: 213 HDSSASGATLFIEPMAVVEANNSIKQLRVKEQTEIDRILAELSQDASLILPQLNANMSIM 272
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D FA+A A +CP ++ I I+ +HPLL
Sbjct: 273 ARLDFIFAKAKLAVDYKCICP------RINDTGKIIIKKGRHPLL--------------- 311
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P K +PID + + +++TGPNTGGKT S+KT+GL +
Sbjct: 312 DPQKV--------------------IPIDFWIGEKFSSLIVTGPNTGGKTVSLKTVGLFT 351
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM ++GL +PA + F+ I ADIGD QS+EQ+LSTFS H+ IVDIL V+ +SL+
Sbjct: 352 LMVQSGLLVPANEGTEMSVFEKIYADIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLI 411
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP+EG ALA SIL+ L + TTHY++L T ENA+ EF +
Sbjct: 412 LLDELGAGTDPTEGAALAMSILESLHQMGATTLATTHYSELKVYAISTTGVENASCEFDV 471
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
ETLRPTYR+L G G SNA I+K +G II+R+++ + ++ R ++ S+
Sbjct: 472 ETLRPTYRLLIGVPGKSNAFAISKRLGLTDDIIERSKEFL-----SQEDIRFEDILLSIE 526
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE----LNFA 611
+ R + E + A S E L +++ED+ RR A K E ++ ++E L +
Sbjct: 527 KNRSEAEKEKMRAESYRQEAERLKKDLEDQK----RRLAAQKESELRKAREEARRILTDS 582
Query: 612 KVQIDTVVQDF--------ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
K Q D +V + E ++R + + L K + ++VE+ P
Sbjct: 583 KHQADELVSEMKRLAKEQEEAEVRRQTEELRQRLNKSINNLDDSLVESIMPRQGLVKPPK 642
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
N P G+ V + +L K T++ +P + VQ G M++ V +N++ +
Sbjct: 643 N---LKP--GDTVLIVNLNQK-GTILSLPDKNGEAQVQAGIMKINVHISNLKLVDE---- 692
Query: 724 NAANPAPRLRKQQEDRQS-GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
+KQQ R G G S + Q +DLRGM + EA +D L
Sbjct: 693 ---------QKQQIQRTGMGKIGVS--------KAQNMSTEIDLRGMMLSEAVDVVDKYL 735
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + +IHG GTG ++ + + L+++P + +
Sbjct: 736 DDASIAGMGEVTLIHGKGTGALRAGLHQHLKHNPHIKSF 774
>gi|310658450|ref|YP_003936171.1| recombination and DNA strand exchange inhibitor protein
[[Clostridium] sticklandii]
gi|308825228|emb|CBH21266.1| recombination and DNA strand exchange inhibitor protein
[[Clostridium] sticklandii]
Length = 793
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 223/766 (29%), Positives = 373/766 (48%), Gaps = 83/766 (10%)
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIG 117
+L P ++ + TLR V L ++ +P+L+ L +N L +LE++I
Sbjct: 88 ILEPYQLLKISDTLRICRKVKNFLRDSEN---------TPILQQLSENITILKDLEDEID 138
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
I + I D AS +L +R E + L + + + + + ++T R+ R
Sbjct: 139 NAIISEEEI-SDNASPELSKVRRSITNTKEQIRQKLSSIVSSSQYSKYLQEAIVTMRQDR 197
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
V +KA ++ +P GI + SSSGAT F+EP VE NN E E IL++L
Sbjct: 198 FVVPVKAENRSNVP-GIVHDSSSSGATLFIEPMAVVEMNNKLREYKVKEQEEIERILTVL 256
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
+A S EI+ + EID A+ + M P ++S D +N++ +H
Sbjct: 257 SAMAGLSYHEIRTNEQMIAEIDFIMAKGKLSVKMKAQEPFINS------DLVMNLKNARH 310
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PL+ D +N VP +I + E +VIT
Sbjct: 311 PLI--------------------DPKNV---------------VPSNINIGKEFDTLVIT 335
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT ++KT+GL ++M+++GL+LP + FD I ADIGD QS+EQ+LSTFS
Sbjct: 336 GPNTGGKTVTLKTIGLFAIMAQSGLHLPTDYGTSICIFDNIFADIGDEQSIEQSLSTFSS 395
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
H++ IV+IL+ V LVL DE+G+GTDP EG ALA SIL LR+ + V TTHY++L
Sbjct: 396 HMTHIVNILDEVKDNCLVLFDELGAGTDPLEGAALAVSILDRLREYKLITVATTHYSELK 455
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
R ENA+ EF ++TL PTYR+L G G SNA I++ +G +II L +
Sbjct: 456 HYALTTNRVENASVEFDVQTLSPTYRLLIGIPGKSNAFEISRKLGLKEEII-----LAAK 510
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
+ ++ + + + R+++E++ + ++ + L ++++ LD + +
Sbjct: 511 HHLDSDSISMEDVLKEIDDNRKQIETEREQSRIIYEDAKKLQTRLKEKESKLDTQKDKII 570
Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
+ + ++ L AK + D +++ + A IN I+ S I ++ + +
Sbjct: 571 QEAKNEARKLLQQAKEEADEAIKELRELSKRAEKQNINKEIEASRRKIKTSLDKYGYKNQ 630
Query: 658 FSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
++E + + G++V+V S K ATVV V D LVQ G M++ + +++
Sbjct: 631 DLITEKDVINPVDIIVAGDEVYVPSFS-KNATVVSVDNDKKEALVQIGIMKLNLPFSSLE 689
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
RL++ ++ +S AG + + T++ +DLRGM +E A
Sbjct: 690 ---------------RLKQNEDIVKSSGAGKIMKN-----KTATAELEIDLRGMDLETAR 729
Query: 776 HQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
++D L + + +IHG+GT V+K + +L++H V Y
Sbjct: 730 IEVDKYLDNSYVAGLPRVTIIHGVGTLVLKNGIKAMLKSHKHVKSY 775
>gi|418576544|ref|ZP_13140678.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
gi|379324965|gb|EHY92109.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus saprophyticus subsp. saprophyticus KACC
16562]
Length = 782
Score = 281 bits (719), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 237/816 (29%), Positives = 396/816 (48%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I+ ++ A G +LS SE+ ++R ++ + N +K L+ + Y L
Sbjct: 65 LSGLAKISTYIHRAKIGGVLSVSELNVIKRLIQ-IQNQYKTFYNNL-LNEEETINYPILN 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ ++ L++L + I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DRMEQLPVLSDLYQSIHQ--KCDTYDLYDNASYELQGIRSKISSTNQRIKQNLDKIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE +
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMS 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E ILS LT E+A+ E + + + ++ +ID A+A +A + G
Sbjct: 236 NQISRLKNDEAIERERILSALTVEVAE-EADACLISESIMGQIDFLTAKARYASSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + D ++ + HPLL ++ +N+ D+E
Sbjct: 295 PQFTK------DRTVYLPKAFHPLLDKQTV------VANTIEFAQDIE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++G+ +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGILIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL ++ SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILHDTTKNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++ + L + TTHY +L NA+ EF + TL PTY++L G G SNA
Sbjct: 434 ILDHVHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM-------EERRKLESQARTA 568
+I+K +G + K+IQ+A+ ++ + + +E+ SL E+R +L+ R A
Sbjct: 494 DISKKLGLNMKVIQKAKSMI-----GQDEQEINEMIASLESNSKRVDEQRIELDYLLREA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
H + Y + ++ K L A K K Q+V+ A + D ++++ +LRD
Sbjct: 549 QDTHDALAKQYEQYQNHEKQLMNEA---KEKANQRVKS----ATKEADDILKELR-ELRD 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
+ +KE E I + + DD + + ++ G++V V + G
Sbjct: 601 QKGAD----VKEHE----LIDKKKQLDDQYEAKSLKQNVQKKKWDEINAGDEVKVLTYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+E+ D + +VQ G +++++ P+ + ++ P ++E+RQS
Sbjct: 653 K-GEVLELI-DHNEAVVQMGIIKMKL------PLEDLEKTKKTKSEPTKMIKRENRQS-- 702
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
K LDLRG R +EA +D L A + +++IHG GTG
Sbjct: 703 ----------------IKMELDLRGYRYDEAMVAVDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V L+ H VA Y P +G TV IK
Sbjct: 747 LQKGVQNHLKRHKNVASYRNGMPSEGGFGVTVVEIK 782
>gi|153932430|ref|YP_001385445.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A str. ATCC 19397]
gi|153936995|ref|YP_001388852.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A str. Hall]
gi|229486367|sp|A7FY72.1|MUTS2_CLOB1 RecName: Full=MutS2 protein
gi|152928474|gb|ABS33974.1| MutS2 family protein [Clostridium botulinum A str. ATCC 19397]
gi|152932909|gb|ABS38408.1| MutS2 family protein [Clostridium botulinum A str. Hall]
Length = 788
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 238/813 (29%), Positives = 399/813 (49%), Gaps = 90/813 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A G L P ++ + L
Sbjct: 39 SMYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKGSALLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150
Query: 133 EDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
EL Q+L E+ K + AR A +L E ++ E++ + L + + ++ + +
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARREAKNII 577
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
AK + D +++D R + + ++E + +++ + +V +
Sbjct: 578 KEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHKGEALKN 637
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+
Sbjct: 638 VKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKD------------ 680
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
LR + + S+ + ++ ++S+DLRGM EEA + +D L A
Sbjct: 681 ---LRAAKGSNSNNSSSKIKKSKKLNLNLRRVESSVDLRGMDAEEAIYTVDKYLDEAYLG 737
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ ++HG GTGV+++ ++++L+ H V KY
Sbjct: 738 GLGEVTIVHGKGTGVLRKTIMDMLKGHSHVKKY 770
>gi|311031396|ref|ZP_07709486.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. m3-13]
Length = 785
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 250/843 (29%), Positives = 404/843 (47%), Gaps = 105/843 (12%)
Query: 9 AQIPFGKSLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
AQ+ + EE K QT A +++ + + L I DI G + A G L+ E+
Sbjct: 32 AQLTPATNYEEVVKRQLQTDEAATVLRLKGEVPLGGITDIRGHVKRAEIGGTLNTHELLD 91
Query: 68 VRRTLRAVNNVWKKLTEAAE--LDGD-SLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCK 123
+ T+ A +KL E LD D S+ P+L E + ELE I CID +
Sbjct: 92 IAGTIYAA----RKLDRFVESVLDEDISI----PILKEYMDQLIIYPELERNIKNCID-E 142
Query: 124 LLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
+LD AS+ L IR + + R E L+S+++ AQ + I IT R R
Sbjct: 143 YGEVLDGASDKLRGIRQQLRSTESRVREKLESMIRSSNAQKMLSDAI----ITIRNERYV 198
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +K ++ GI + SSSGAT F+EP+ V+ NN+ E E IL+ L+A
Sbjct: 199 IPVKQEYRSSY-GGIVHDQSSSGATLFIEPQQVVDLNNVLQEAKVKEKLEIDRILAELSA 257
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
++A+ RE+ + + EID FA+A + + + G P ++++ ++ + +HPL
Sbjct: 258 DVAEVARELLENVHILAEIDFMFAKAKYGKHIRGTKPEINNEKYIRLVQA------RHPL 311
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D VP I++ + +VITGP
Sbjct: 312 I-----------------------------------NEDEVVPNTIELGKDYTSIVITGP 336
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL ++M+++GL++PA++ + F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 337 NTGGKTVTLKTLGLLTIMAQSGLHVPAQDGSEVGVFNAVYADIGDEQSIEQSLSTFSSHM 396
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
IVDIL+ V +SLVL DE+G+GTDP EG ALA SIL + R + TTHY +L
Sbjct: 397 VNIVDILKKVDHDSLVLFDELGAGTDPQEGAALAISILDEVYQRGACVIATTHYPELKAY 456
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+K +G ++I RA++ V
Sbjct: 457 GYNRESVVNASVEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLSMEVIDRAKEFV---- 512
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ + SL +++ E + R A + L+ ++E + ++L+ + L K
Sbjct: 513 -SEDSNKVENMIASLEASQKRAEEEWREAEKIRKTSQQLHEDLEQQMQELNEQRDKLYEK 571
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
++ ++ + AK + + V+++ + A+ + +++ + V +
Sbjct: 572 AAEKAEKMVEDAKEEAEKVIRELRKMRMEQHANVKEHELIDAKKRLEGAVPTVKKSAATK 631
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
E + + P G++V V SL K +V+ GD + VQ G M+++VK +I+ +
Sbjct: 632 KQEVSNQTLEP--GDEVKVMSLNQK-GHLVQKTGDKEW-QVQIGIMKMKVKTKDIQYV-- 685
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL- 778
+ P P E + + + S LDLRG R E A ++
Sbjct: 686 ------SRPKP-----VETKPLATIKGKDYHVSI---------ELDLRGERFENALMRVE 725
Query: 779 ----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVA 832
D LA + S +IHG GTG ++ V L+NH V Y + S G TV
Sbjct: 726 KYLDDATLAGYHRVS---IIHGKGTGALRVGVQNYLKNHRSVKNYRFGEASEGGTGVTVV 782
Query: 833 YIK 835
+K
Sbjct: 783 ELK 785
>gi|387819388|ref|YP_005679735.1| recombination inhibitory protein MutS2 [Clostridium botulinum
H04402 065]
gi|322807432|emb|CBZ05006.1| recombination inhibitory protein MutS2 [Clostridium botulinum
H04402 065]
Length = 788
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 238/813 (29%), Positives = 399/813 (49%), Gaps = 90/813 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A G L P ++ + L
Sbjct: 39 SVYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKGSALLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150
Query: 133 EDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
EL ++L E+ K + AR A +L E ++ E++ + L + + ++ + +
Sbjct: 518 ELIENLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARREAKNII 577
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
AK + D +++D R + + ++E + +++ + +V E
Sbjct: 578 KEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHEGEALKN 637
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+
Sbjct: 638 VKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKD------------ 680
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
LR + + S+ + ++ ++S+DLRGM EEA + +D L A
Sbjct: 681 ---LRAAKGSNSNNSSSKIKKSKKLNLNLRRVESSVDLRGMDAEEAIYTVDKYLDEAYLG 737
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ ++HG GTGV+++ ++++L+ H V KY
Sbjct: 738 GLGEVTIVHGKGTGVLRKTIMDMLKGHSHVKKY 770
>gi|293376245|ref|ZP_06622488.1| putative recombination and DNA strand exchange inhibitor protein
[Turicibacter sanguinis PC909]
gi|325845166|ref|ZP_08168475.1| recombination and DNA strand exchange inhibitor protein
[Turicibacter sp. HGF1]
gi|292645137|gb|EFF63204.1| putative recombination and DNA strand exchange inhibitor protein
[Turicibacter sanguinis PC909]
gi|325488831|gb|EGC91231.1| recombination and DNA strand exchange inhibitor protein
[Turicibacter sp. HGF1]
Length = 781
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 249/820 (30%), Positives = 398/820 (48%), Gaps = 126/820 (15%)
Query: 24 LNQTSAALAMMQS-QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LNQ+ AL ++ + L + DI+ + A +LS E+ AV R L AV+ +
Sbjct: 46 LNQSDEALRIIYALGEAPLGGVSDISEAIARAKISAILSSQELLAVSRLLYAVSQMKSFA 105
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNF-LTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
E+ D+ P+ N L+ L+ I CID + ++D AS +L IR
Sbjct: 106 ERLNEIKVDA-----PIFAHHTNTLVALSSLQNAINACID-ETGYVMDSASGELRSIR-- 157
Query: 142 RKRNMENLDSLLKKVAAQIF--QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
R +++ +S +K+ Q+ + + ++T R R V ++A +K G + S
Sbjct: 158 --RAIQSTESRIKERLNQVVSERRSKLTDGIVTIRNERYVVPVRADYKNTF-GGTIHDQS 214
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
SSG TYFMEPK V+ NN E E IL LT E+ K + ++ + EID
Sbjct: 215 SSGNTYFMEPKEVVDLNNKLQEWHVEERREIERILRELTEEVKKFVDLLSLNVELLGEID 274
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
FA+ +A+ ++G P ++++ I + +HPL+ K
Sbjct: 275 FMFAKGKYARLINGTRPKINTKG------IIRLVAARHPLI----------------DQK 312
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
S V N DI++ E +VITGPNTGGKT ++KT+GL +LM++
Sbjct: 313 SVVAN-------------------DIELGDEYTTIVITGPNTGGKTVTLKTVGLLTLMAQ 353
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
AGL +PA +L FD + ADIGD QS+EQ+LSTFS H++ IV I+E ++ SL+L DE
Sbjct: 354 AGLLIPAHESSQLAIFDHVFADIGDEQSIEQSLSTFSSHMTNIVKIMERLTVNSLILFDE 413
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+G+GTDP EG +LA SIL Y++ R + T+HY +L + NA+ EF++ETL
Sbjct: 414 LGAGTDPKEGASLAISILNYVKVRGARTIATSHYPELKAYAYEQDDVINASVEFNVETLS 473
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE------RQQHRKSELYQ- 552
PTYR+L G G SNA I+K +G I+ +A+ VE R E + + R +L Q
Sbjct: 474 PTYRLLVGVPGRSNAFEISKRLGLKEAILNQARSYVESERTEMTDLITKLEDRGLQLDQE 533
Query: 553 --------SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
+L+EE +K Q A AE + +I+ EA + R+A +E +Q+
Sbjct: 534 IQHLQQQNTLVEEMKKEYEQK--LAKFEAEREKVLEDIKKEAFESVRQA----KEEAEQI 587
Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
+L AK D ++D E +++ SL K++E+ A + F N
Sbjct: 588 VMDLRQAKKMADLSMKDHE------LTEKLTSL-KKAEAKQA---------EQFKKKAQN 631
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P G++V V SL ++ ++E + + +VQ G M+V +K +++ + S +K
Sbjct: 632 KQPLKP--GDEVMVLSL-NRQGELIEQTKNGEW-MVQLGMMKVNIKPEDLQYLRKSVQKK 687
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----D 779
+ K+ + G + LDLRG R E+A L D
Sbjct: 688 ETKKGQMVHKRN--------------SHVGIQ-------LDLRGERYEDAMLMLDKYFDD 726
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ LA +++ + +IHG GTG +++ V + L+ + VA +
Sbjct: 727 VLLAGYQT---ITIIHGHGTGALRQGVHKYLKQNKHVASF 763
>gi|392957411|ref|ZP_10322935.1| recombination and DNA strand exchange inhibitor protein [Bacillus
macauensis ZFHKF-1]
gi|391876818|gb|EIT85414.1| recombination and DNA strand exchange inhibitor protein [Bacillus
macauensis ZFHKF-1]
Length = 787
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 232/804 (28%), Positives = 385/804 (47%), Gaps = 90/804 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +L E+ T+ +K+ E DG L PLL
Sbjct: 65 LGGIRDIRASVKRAAIGGMLFAEELVDSATTIHG-GRRFKRFVEGMVEDGIEL----PLL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
++ + L ELE I CID + +D AS +L IR + + R E L+S+++
Sbjct: 120 AARVEEIDPLQELEAAIKACIDDNGHV-MDSASPELRTIRGQLRTFEARVREKLESMVRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
+ Q + +IT R R + +K ++ G+ + SSSGAT F+EP+ +
Sbjct: 179 SSYQKM----LSDTIITIRNDRFVLPVKQEYRANF-GGMVHDQSSSGATLFIEPQAIITI 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL L+ + + + + + + +ID FA+A +++ +
Sbjct: 234 NNQLKEAKAKETREIEKILRELSGVVGEHAEPLLHNVAVLAQIDFIFAKAFYSRELKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++ Q S++I +HPL+ ++
Sbjct: 294 PIMNDQQ------SMSIIKARHPLIDAEAV------------------------------ 317
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
VPID + + ++ITGPNTGGKT ++KT+GL SLM+++GL +PA+ + F
Sbjct: 318 -----VPIDATLGGAFQSLIITGPNTGGKTVTLKTIGLLSLMAQSGLQIPAEEQSEMTVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ I ADIGD QS+EQ+LSTFS H+ IVDIL+ V+ +SLVL DE+G+GTDP EG ALA S
Sbjct: 373 ETIYADIGDEQSIEQSLSTFSSHMVNIVDILKTVNYKSLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+ R V TTHY++L NA+ EF++ETLRPTY++L G G SNA
Sbjct: 433 ILDYVFARGARVVATTHYSELKAYAYNREGVMNASVEFNVETLRPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I++ +G D +II A+ + + ++ + +SL + +++ E + A +L +
Sbjct: 493 EISRRLGLDVRIIDEAKAQI-----SAEDNKIDNMIRSLEDNQKRAEFEREEAIALRQDA 547
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
L ++++ + + L+ L + ++ ++ + AK + V+++ ++A + +
Sbjct: 548 EKLKQDLQQKLEQLEAERDGLLEQAERKAEEAVAAAKKTAEDVIKELRTFQQEAGNVKEH 607
Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
LI+ + A + F P G++V V S G K + +V +
Sbjct: 608 RLIEARKKLDEATPTLRTKKKKQGAPKPKAVDFEP--GDEVKVLSFGQKGHIIAKVSNQE 665
Query: 696 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 755
+ VQ G +++ V +N++ + K K+QE R S++ S
Sbjct: 666 YS--VQIGILKMNVSRNDLELLKQPK-----------EKKQEPRAFVKVQGSDDHVS--- 709
Query: 756 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 813
LDLRG R E+A ++D L A + + +IHG GTG ++ V ++L+ H
Sbjct: 710 ------PELDLRGKRYEDAMLEVDKYLDEAMLAGFAQVSIIHGKGTGALRSGVQQLLKTH 763
Query: 814 PRV--AKYEQESPMNYGCTVAYIK 835
P V + + G TVA +K
Sbjct: 764 PNVKSTRMGAANEGGSGMTVAILK 787
>gi|227524346|ref|ZP_03954395.1| MutS family DNA mismatch repair protein [Lactobacillus hilgardii
ATCC 8290]
gi|227088577|gb|EEI23889.1| MutS family DNA mismatch repair protein [Lactobacillus hilgardii
ATCC 8290]
Length = 788
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 238/802 (29%), Positives = 379/802 (47%), Gaps = 109/802 (13%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
I N+++SG LS I + R +R +N+ + D + + +++ +
Sbjct: 80 IENASLSGTELS--HITKLLRAVRTINDFFDNFQ-------DEDVNLTVVSQIVSQLTLM 130
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
E+ +++ I+ ILD AS +L IR R ++ S + K + G K
Sbjct: 131 PEITKRMVQSINEDG-SILDTASSELRTIRRTINRTQNDIRSRIGK-----YLKGSDSKY 184
Query: 170 L----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
L IT R R + I+A +K GI + S+SG T ++EP VE NN R +
Sbjct: 185 LTESIITMREDRFVLPIRADYKQHFG-GIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLA 243
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E AEE IL+ LT I E+ M+ V ++D A+A FA + V P +S
Sbjct: 244 ERAEERRILAELTDLIRPYRSELLNNMNLVGQLDFVNAKAKFAHQIRAVQP------EIS 297
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
D+ +N+ +HPL+ D V DI
Sbjct: 298 RDNVVNLRQARHPLI-----------------------------------ARDKVVANDI 322
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
++ E R ++ITGPNTGGKT ++KT+GL LM ++GL++ A ++ FD + ADIGD
Sbjct: 323 QIGDEYRTIIITGPNTGGKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFADIGDD 382
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+E NLSTFS H+ I+ IL +S +SL+L+DE+G+GTDP EG ALA +I+ +
Sbjct: 383 QSIEANLSTFSSHMDNIISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAIHQSGC 442
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY +L + NA+ EF +ETLRPTYR L G G SNALNIA +G +
Sbjct: 443 ELIATTHYPELKAYAYNRSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIASKLGLSK 502
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHAEIMDLYREIE 583
II++A+ + + Q+ +E +L+ Q + LH ++ + + + +
Sbjct: 503 GIIEKARAFTDSENQDINNMIDELTAQTKRAHDEADQLDEQLTDSTKLHDDLQNQFTQYQ 562
Query: 584 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE- 642
++ KD HL + +Q Q + AK+ D ++ D + + S IKE+E
Sbjct: 563 NQ-KD------HLLEQAREQANQVVEKAKISADKIIADLHKKQQQVG----QSAIKENEL 611
Query: 643 -SAIAAI----VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
A A+ V + + E F P G++V VKS G + + + +
Sbjct: 612 IDAKGALNRLEVTPNLKKNKVLRKEKAKHDFHP--GDEVLVKSYGQQGTLIRQEK--NGA 667
Query: 698 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 757
VQ G +++++ +N++ K A + + Q + ++ S+G S P
Sbjct: 668 WEVQLGILKMQIDENDL-------EKAAPEKKAKQKYQTQVSRTRSSGMS-------P-- 711
Query: 758 QTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
+LDLRG R EEA ++LD I A + +IHG GTG +++ V E LR++ R
Sbjct: 712 -----TLDLRGHRYEEAMYELDRYIDSALLAGYPSVTIIHGKGTGALRKGVTEYLRSNAR 766
Query: 816 VAKYEQESPM--NYGCTVAYIK 835
+ + +P G TV K
Sbjct: 767 IKSFGYSAPNAGGDGSTVVKFK 788
>gi|390935290|ref|YP_006392795.1| MutS2 protein [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
gi|389570791|gb|AFK87196.1| MutS2 protein [Thermoanaerobacterium saccharolyticum JW/SL-YS485]
Length = 786
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 209/659 (31%), Positives = 333/659 (50%), Gaps = 84/659 (12%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R V +K ++ G+ + SSSGAT F+EP VE NN +L E
Sbjct: 184 PIITIRNGRYVVPVKQEYRGTFK-GLVHDQSSSGATLFIEPMAVVELNNDLRQLEIKEQH 242
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ LT E+ + EI M + E+D+ FA+A ++ D PIL+++ +
Sbjct: 243 EIERILAELTDEVGEHADEIYENMVALKELDVIFAKAKYSINTDSTKPILNTKGY----- 297
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
INI+ +HPL+ D VPI + +
Sbjct: 298 -INIKNARHPLIA-----------------------------------KDAVVPISVHLG 321
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+VITGPNTGGKT ++KT+GL +LMS +GL +PA + + +FD + DIGD QS+
Sbjct: 322 QSFNTLVITGPNTGGKTVTLKTVGLLTLMSMSGLNIPADDGSDVAFFDNVFVDIGDEQSI 381
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV IL V+ SLVL+DE+G+GTDP+EG ALA SIL +L +
Sbjct: 382 EQSLSTFSAHMTNIVKILNNVNSNSLVLLDELGAGTDPTEGAALAMSILDFLHRMNCRTI 441
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L K+ ENA+ EF +ETL+PTYR+ G G SNA I+K +G + II
Sbjct: 442 ATTHYSELKQYALKNEGVENASVEFDVETLKPTYRLTIGIPGKSNAFEISKRLGLNDDII 501
Query: 529 QRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
+ A+ + E LR E ++ + L +R + E+ + L + L E E +
Sbjct: 502 ENAKNYITSEELRFE-------DILRDLENKRTEAENAKQKIEELKRHVESLKDEYEKKV 554
Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAI 645
K+ +R + K ++ ++ L K D ++ +L++A +D N LI+E+ +
Sbjct: 555 KEAEREREKIIEKAREKAKKILEGTKSTADEIIA----KLKEAEKSDRKNKLIEEARLKL 610
Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
+ + +++ SE P+ G+ ++ L D+ T + P D V +Q
Sbjct: 611 KENI--NEIEENLKRSEIPEYKKIPKNVMPGQTFYIVPL-DQTGTALSEPDKDGNVKIQA 667
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G +++ V +N+R ++++ + G A NE++S + T
Sbjct: 668 GILKMNVHISNLR--------------EAESSEEKEMEKGFAKYINEKSS---NIST--- 707
Query: 763 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
S+DLRG +EEAS ++D L A + VIHG GTG+++ + +L+ + V +
Sbjct: 708 SIDLRGKTLEEASIEVDKYLDDAYLAGLKQVTVIHGKGTGILRSGITRLLKMNKHVKSF 766
>gi|332982288|ref|YP_004463729.1| MutS2 family protein [Mahella australiensis 50-1 BON]
gi|332699966|gb|AEE96907.1| MutS2 family protein [Mahella australiensis 50-1 BON]
Length = 784
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 238/813 (29%), Positives = 392/813 (48%), Gaps = 111/813 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSE---ICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
L I D+ +N+A G L P E I +V +T R + + + E A+L D
Sbjct: 65 LEGIRDVKDSVNAAAVGATLRPKELLDIASVIKTARLMKG-YAQENENADLIAD------ 117
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
L + + + +E++I CI + I D E ++ R + N D L +
Sbjct: 118 ----LCYSLHSMKAVEDEIYRCILSEDEIADDATPELKDIRRHIAQANQRIRDKLNDIIH 173
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ +Q + P++T R R V IK + +G+ + S SGAT F+EP VE NN
Sbjct: 174 STQYQRM-LQDPIVTIRNGRYVVPIKQECRSSF-EGLIQDQSGSGATLFIEPMAVVEANN 231
Query: 218 MEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
++R + EE IL+ + I + +I + + ++DL FA+ + M+ V P
Sbjct: 232 -DLRAYMLQEQEEIERILASFSHMIGQHSEDILNDLGILAQLDLIFAKGQLSIEMNAVRP 290
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+L+ + F + +HPL+ +P
Sbjct: 291 LLTENDGIIFKRA------RHPLI---------------DP------------------- 310
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D VPID+++ + ++ITGPNTGGKT ++KT+GL +LM++AGL++PA ++ F
Sbjct: 311 -DKVVPIDLELGRQFTQLIITGPNTGGKTVTLKTIGLLTLMAQAGLHVPAGIGTQIRIFT 369
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ ADIGD QS+EQ+LSTFS H++ IV IL SLVL+DE+G+GTDP+EG ALA +I
Sbjct: 370 GVYADIGDEQSIEQSLSTFSSHMTNIVHILNSADHRSLVLLDELGAGTDPTEGAALAMAI 429
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L LR + + TTHY+ L K NA EF +ETLRPTYR++ G G SNA
Sbjct: 430 LDELRHKGAIVAATTHYSQLKAYALKTPGVINAGMEFDVETLRPTYRLIVGVPGKSNAFI 489
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I++ +G +++ RAQ L+ + + E +EE+R + + R A A+++
Sbjct: 490 ISRKLGLSDEVLARAQALL------NESDLRFEDVIGKLEEQRHMAEKERAEA---AQVL 540
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQE----LNFAKVQIDTVVQDFENQLRDA--- 629
+ R +E + + L+ + + + +QE L+ AK Q D +++ +LRDA
Sbjct: 541 EQARLLEQKYQQLNTQLEQKRNDIIHKARQEAKVVLSRAKSQADQIIK----ELRDAQMQ 596
Query: 630 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
++ E N I+++ + + +E P+ + ++ P G QV++ L + + +
Sbjct: 597 ASKEANKTIEQARTTLKKEIEELSPEQEAGEHYKPVTNVKP--GMQVYIVPL--RASGFI 652
Query: 690 EVPGD-DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
P D + V VQ G M+ +++ +P + + + P +G A S++
Sbjct: 653 LTPPDANGNVQVQVGIMKAAASLSDLAELPEHEAQVKSQP------------TGKAASTS 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
G + D+RG +EEA +D L A +F+IHG GTGV++ +
Sbjct: 701 RSRDVGLEI-------DVRGQMLEEALANIDKYLDDAAISGLEEVFIIHGKGTGVLRTGI 753
Query: 807 LEILRNHPRVAKYEQ----ESPMNYGCTVAYIK 835
+ L +HP VA Y E M G TV +K
Sbjct: 754 QDFLGHHPHVASYRTGRYGEGEM--GVTVVKLK 784
>gi|148381072|ref|YP_001255613.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A str. ATCC 3502]
gi|148290556|emb|CAL84684.1| putative DNA mismatch repair protein [Clostridium botulinum A str.
ATCC 3502]
Length = 788
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 238/813 (29%), Positives = 399/813 (49%), Gaps = 90/813 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A G L P ++ + L
Sbjct: 39 SMYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKGSALLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEI-ADRAS 150
Query: 133 EDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYVLRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
EL Q+L E+ K + AR A +L E ++ E++ + L + + ++ + +
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARREAKNII 577
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
AK + D +++D R + + ++E + +++ + +V +
Sbjct: 578 KEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHKGEALKN 637
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+
Sbjct: 638 VKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKD------------ 680
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
LR + + S+ + ++ ++S+DLRGM EEA + +D L A
Sbjct: 681 ---LRAAKGSNSNNSSSKIKKSKKLNLNLRRVESSVDLRGMDAEEAIYTVDKYLDEAYLG 737
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ ++HG GTGV+++ ++++L+ H V KY
Sbjct: 738 GLGEVTIVHGKGTGVLRKTIMDMLKGHSHVKKY 770
>gi|418614027|ref|ZP_13177017.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU118]
gi|374821896|gb|EHR85937.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus epidermidis VCU118]
Length = 782
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 240/816 (29%), Positives = 390/816 (47%), Gaps = 119/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ +E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVAELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINETCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT ++ +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTGFVS-AEADALLIAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D +I + HPLL +N+ DVE
Sbjct: 295 PTFKE------DRTIYLPNAFHPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTA 568
+I+K +G II +A+ ++ + + + +SL + ++++ Q R A
Sbjct: 494 DISKKLGLSLNIINKAKTMI-----GTDEQEINAMIESLEQNSKRVDQQRIELDRLVREA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
H + Y++ ++ K L A K K Q+V+ A + D ++++ N LRD
Sbjct: 549 QQTHDALSKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADEILKELRN-LRD 600
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGD 683
E +KE E I + + DD + V ++ G++V V S G
Sbjct: 601 HKGAE----VKEHE----LIDKKKQLDDQYEVKSIKQHVQKKKYDTIHTGDEVKVLSYGQ 652
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K + V + +VQ G +++++ PI + ++ +++R
Sbjct: 653 KGEVLELVGE--EEAVVQMGIIKMKL------PIEDLEKTKKKKEKHTKMVTRQNR---- 700
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
QT K LDLRG R EEA ++LD L A + +++IHG GTG
Sbjct: 701 --------------QTIKTELDLRGYRYEEALNELDQYLDQAVLSNYEQVYIIHGKGTGA 746
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + L+ H V ++ P +G TVA +K
Sbjct: 747 LQKGVQQHLKKHKSVRQFRGGMPSEGGFGVTVAELK 782
>gi|182626137|ref|ZP_02953897.1| MutS2 family protein [Clostridium perfringens D str. JGS1721]
gi|422874800|ref|ZP_16921285.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens F262]
gi|177908574|gb|EDT71099.1| MutS2 family protein [Clostridium perfringens D str. JGS1721]
gi|380304441|gb|EIA16730.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens F262]
Length = 786
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 226/719 (31%), Positives = 353/719 (49%), Gaps = 87/719 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + +DG PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLDGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 720
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|220928895|ref|YP_002505804.1| MutS2 family protein [Clostridium cellulolyticum H10]
gi|254766596|sp|B8I1Z8.1|MUTS2_CLOCE RecName: Full=MutS2 protein
gi|219999223|gb|ACL75824.1| MutS2 family protein [Clostridium cellulolyticum H10]
Length = 792
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 244/819 (29%), Positives = 396/819 (48%), Gaps = 108/819 (13%)
Query: 21 QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
+K+L++T+ ++ +M+ L I DI L G +L+P E+ + LRA +
Sbjct: 44 EKMLSETNDGVSCIMRRGSPPLGGITDIRMSLKRLDMGGVLNPGELLRLAGVLRAARRLK 103
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + +LD ++ L+ L++ LE+KI CI + I D AS L IR
Sbjct: 104 GYIND--KLDENNASVVKELISCLESNQ---RLEQKIDNCILSEDEIA-DNASPALSSIR 157
Query: 140 AERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ K + L+S+++ Q + I + ++T R R + +K HK +P G+
Sbjct: 158 RQIKEQQASIKDKLNSIIRSTKYQKY----IQESVVTMRGDRYVIPVKQEHKGDIP-GLV 212
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SGAT F+EP VE NN +L E E IL+ L+ + + ++ M +
Sbjct: 213 HDSSASGATLFIEPMAVVEANNSIKQLRVKEQTEIDRILAELSQDASLVLPQLNANMSIM 272
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D FA++ A + +CP ++ I I+ +HPLL
Sbjct: 273 ARLDFIFAKSKLAIDYNCICP------KINDTGKIIIKKGRHPLL--------------- 311
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P VPID + + +++TGPNTGGKT S+KT+GL +
Sbjct: 312 DP--------------------KIVVPIDFWIGEKFSSLIVTGPNTGGKTVSLKTVGLFT 351
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM ++GL +PA + + F+ I ADIGD QS+EQ+LSTFS H+ IVDIL V+ +SL+
Sbjct: 352 LMMQSGLLVPANDGTEMSVFEKIYADIGDEQSIEQSLSTFSSHMKNIVDILSGVNNKSLI 411
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP+EG ALA SIL+ L + TTHY++L T ENA+ EF +
Sbjct: 412 LLDELGAGTDPTEGAALAMSILECLHQMGATTLATTHYSELKVYAISTTGVENASCEFDV 471
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
ETLRPTYR+L G G SNA I+K +G II+R+++ + ++ R ++ S+
Sbjct: 472 ETLRPTYRLLIGVPGKSNAFAISKRLGLTDDIIERSKEFL-----SQEDIRFEDILLSIE 526
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE----LNFA 611
+ R + E + A S E L +++ED+ RR A K E ++ ++E L +
Sbjct: 527 KNRSEAEKEKMRAESYRQEAERLKKDLEDQK----RRLAAQKESELRKAREEARRILTDS 582
Query: 612 KVQIDTVVQDF--------ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
K Q D +V + E ++R + + L K + ++VE+ P
Sbjct: 583 KRQADELVSEMKRLAKEQEEAEVRRQTEELRQKLNKSINNLDDSLVESIMPRQGLVKPPK 642
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
N P G+ V + +L K TV+ +P + VQ G M++ V +N++ +
Sbjct: 643 N---LKP--GDTVLIVNLNQK-GTVLTLPDKNGEAQVQAGIMKINVHISNLKLVDE---- 692
Query: 724 NAANPAPRLRKQQEDRQS-GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
+KQQ R G G S + Q +DLRGM + EA +D L
Sbjct: 693 ---------QKQQIQRTGMGKIGVS--------KAQNMSTEIDLRGMMLSEAVDVVDKYL 735
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + +IHG GTG ++ + + L+++P + +
Sbjct: 736 DDASIAGMGGVTLIHGKGTGALRAGLHQHLKHNPHIKSF 774
>gi|326201810|ref|ZP_08191681.1| LOW QUALITY PROTEIN: MutS2 family protein [Clostridium
papyrosolvens DSM 2782]
gi|325988410|gb|EGD49235.1| LOW QUALITY PROTEIN: MutS2 family protein [Clostridium
papyrosolvens DSM 2782]
Length = 792
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 241/819 (29%), Positives = 393/819 (47%), Gaps = 108/819 (13%)
Query: 21 QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
+K+L++T+ ++ +++ L I DI L G +L+P E+ + LRA +
Sbjct: 44 EKMLSETNDGVSCVLKRGSPPLGGITDIRLTLKRLDMGGVLNPGELLRLAGVLRAARRLK 103
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + LD + L+ L++ LE+KI CI + I D AS L IR
Sbjct: 104 GYIND--RLDDNKTNVVHELISCLESNQ---RLEQKIDSCILSEDEIA-DSASPALSSIR 157
Query: 140 AERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ K + L+S+++ Q F I + ++T R R + +K HK +P G+
Sbjct: 158 RQIKEQQASIKDRLNSIIRSTKYQKF----IQESVVTMRGDRYVIPVKQEHKGDIP-GLV 212
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SGAT F+EP VE NN +L E E IL+ L+ + + ++ M +
Sbjct: 213 HDSSASGATLFIEPMAVVEANNSIKQLRVKEQTEIDRILAELSQDASLILPQLNANMSIM 272
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D FA+A A +CP+++ I I+ +HPLL
Sbjct: 273 ARLDFIFAKAKLAVDYKCICPVINDTG------KIIIKKGRHPLL--------------- 311
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P K +PID + + +++TGPNTGGKT S+KT+GL +
Sbjct: 312 DPQKV--------------------IPIDFWIGDKFSSLIVTGPNTGGKTVSLKTVGLFT 351
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM ++GL +PA + F+ I ADIGD QS+EQ+LSTFS H+ IVDIL+ V+ +SL+
Sbjct: 352 LMVQSGLLIPANEGTEMSVFEKIYADIGDEQSIEQSLSTFSSHMKNIVDILDGVNNKSLI 411
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP+EG ALA SIL+ L + TTHY++L ENA+ EF +
Sbjct: 412 LLDELGAGTDPTEGAALAMSILESLHRMGATTLATTHYSELKVYAISTAGVENASCEFDV 471
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
ETLRPTYR+L G G SNA I+K +G II+R+++ + ++ R ++ S+
Sbjct: 472 ETLRPTYRLLIGVPGKSNAFAISKRLGLTDDIIERSKEFL-----SQEDIRFEDILLSIE 526
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE----LNFA 611
+ R + E + A S E L +++ED+ RR A K E ++ ++E L +
Sbjct: 527 KNRSEAEKEKMRAESYRQEAERLKKDLEDQK----RRLATQKESELRKAREEARRILTDS 582
Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIA--------AIVEAHRPDDDFSVSET 663
K Q D +V + + ++ E+ +E + ++VE+ P
Sbjct: 583 KHQADELVSEMKRLAKEQEEAEVRRQTEELRQRLNKSINKLDDSLVESIMPRQGLVKPPK 642
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
N P G+ V + +L K T++ +P + VQ G M++ V +N++ +
Sbjct: 643 N---LKP--GDTVLIVNLNQK-GTILAIPDKNGEAQVQAGIMKINVHISNLKLVDE---- 692
Query: 724 NAANPAPRLRKQQEDRQS-GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
+KQQ R G G S + Q +DLRGM + EA +D L
Sbjct: 693 ---------QKQQIQRTGMGKIGVS--------KAQNMSTDIDLRGMMLSEAVDVVDKYL 735
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + +IHG GTG ++ + + L+++P + +
Sbjct: 736 DDASIAGMGEVTLIHGKGTGALRAGLHQHLKHNPHIKSF 774
>gi|15615668|ref|NP_243972.1| recombination and DNA strand exchange inhibitor protein [Bacillus
halodurans C-125]
gi|20139206|sp|Q9K8A0.1|MUTS2_BACHD RecName: Full=MutS2 protein
gi|10175728|dbj|BAB06825.1| DNA mismatch repair protein [Bacillus halodurans C-125]
Length = 785
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 245/792 (30%), Positives = 376/792 (47%), Gaps = 107/792 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQRYS 97
L I DI L A G LL SE+ V T+ R + + + E E D
Sbjct: 64 LGGIFDIKPHLKRAKIGGLLHASELLEVASTIYGGRQLKKFIETMIEEEEAD-------L 116
Query: 98 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 156
PLL E + LT+LE I CID + LD AS L +R + + N+ S L+ +
Sbjct: 117 PLLGEFARQIVPLTDLERAIKQCIDDNGHV-LDSASPTLRTLRHQIRSFEANVRSKLEGI 175
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A + ++T R R + +K ++ GI + S+SGAT F+EP+ VE N
Sbjct: 176 TRSSNTAKMLSDAIVTIRNDRYVIPVKQEYRGAF-GGIVHDQSASGATLFVEPQAVVEIN 234
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N E E ILS L+ ++++ ++ +D + E+D ARA + + + P
Sbjct: 235 NQLREAKAKEQREIERILSELSMQVSEHVDDLFVNVDVLAELDFIMARAHYGKAIRATQP 294
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
IL+++ ++ +HPL+ P
Sbjct: 295 ILNNRGYLLIKQG------RHPLI----------------P------------------- 313
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D VPIDI++ +VITGPNTGGKT ++KT+GL +LM+++GL++PA+ L F
Sbjct: 314 DDEIVPIDIELGHSYSSLVITGPNTGGKTVTLKTIGLLTLMAQSGLHVPAEEESELAVFK 373
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ ADIGD QS+EQ+LSTFS H++ IVDIL V ESLVL DE+G+GTDP+EG ALA +I
Sbjct: 374 HVFADIGDEQSIEQSLSTFSSHMTNIVDILGKVDHESLVLFDELGAGTDPTEGAALAIAI 433
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + R V TTHY++L NA+ EF +ETL PTYR+L G G SNA
Sbjct: 434 LDDVYRRGARIVATTHYSELKGYAYNREGVMNASVEFDVETLSPTYRLLIGVPGRSNAFA 493
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+K +G + KII++A+ + + + + SL + ++ ES A E
Sbjct: 494 ISKRLGLEEKIIEQAKAHI-----DEDASQVESMIASLEQSQKSAESDWEEAEKALQEAE 548
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV---QDFENQLRDASADE 633
L +++ + DL++ + A+ QQ +Q + AK + + ++ +D + Q +
Sbjct: 549 QLRLDLQKKLDDLEKEKERILAEAEQQAEQAVKDAKEEAEVIISELRDLQKQGVSVKEHQ 608
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
I K E A + + + + F P G++V V S G K V +V
Sbjct: 609 IIDAKKHLEEAAPKLTKQQKK---VKRTAEKKREFKP--GDEVKVLSFGQKGHIVEKV-- 661
Query: 694 DDDTVLVQYGKMRVRVKKNNI----RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
+ VQ G M+++V+ +++ RP P + P +R GS +
Sbjct: 662 SEAEYQVQMGIMKMKVEASDLQLIDRPQPVETK-----PLATIR-----------GSDHH 705
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKE 804
K LDLRG R EEA ++ D LA + S S +IHG GTG +++
Sbjct: 706 ----------VKPELDLRGERYEEAMLKVEKYLDDALLAGYASVS---IIHGKGTGALRK 752
Query: 805 RVLEILRNHPRV 816
V ++L+ HP V
Sbjct: 753 GVKDLLKRHPHV 764
>gi|334340999|ref|YP_004545979.1| MutS2 family protein [Desulfotomaculum ruminis DSM 2154]
gi|334092353|gb|AEG60693.1| MutS2 family protein [Desulfotomaculum ruminis DSM 2154]
Length = 783
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 234/789 (29%), Positives = 391/789 (49%), Gaps = 102/789 (12%)
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
LS E+ A TL A + K TE + RY L EL + +LE+ I
Sbjct: 83 LSAEELLATGETLAAARRIKKFFTEKKD-------RYPLLSELAEAMIHQPQLEKDILRA 135
Query: 120 IDCKLLIILDRASEDLELIRA-ERKRNM--ENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
I I D + E L++ R +R +N E ++S+++ Q + + P+IT R
Sbjct: 136 ILPGGEIADDASPELLQIRRGLQRSQNRIRERMESIIRSSENQKY----LQDPIITIRND 191
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R V +K ++ +P GI + S+SGAT F+EP VE NN RL +E E IL+
Sbjct: 192 RYVVPVKQEYRNQIP-GIVHDQSASGATLFVEPMPVVEANNEVRRLVAAEKQEIQKILAE 250
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
L+ +++ E+ +D + ++D A+A +++ ++ P + ++I +
Sbjct: 251 LSQGVSEISEELTITLDALGQLDFVMAKARYSRQLNAWGP------KIVEGGVMDIRKGR 304
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLL + VP I + + R +VI
Sbjct: 305 HPLLPADA------------------------------------VPATISLGKDFRSLVI 328
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT ++KT+GL +LM+++GL++PA++ + F I ADIGD QS+EQ+LSTFS
Sbjct: 329 TGPNTGGKTVTLKTVGLFTLMTQSGLHIPAESGTEMGVFSKIYADIGDEQSIEQSLSTFS 388
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
H++ +VDIL + SLVL+DE+G+GTDP+EG ALA +IL+ L R + TTHY++L
Sbjct: 389 SHMTNLVDILAGAGQGSLVLLDELGAGTDPTEGAALARAILETLFQRGVCTIATTHYSEL 448
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
ENA+ EF +ETLRPTYR+L G G SNA I+ +G +++QRA++ +
Sbjct: 449 KNYAYTTPGVENASVEFDIETLRPTYRLLIGRPGRSNAFEISARLGLSPEVVQRARQFL- 507
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE---IMDLYREIEDEAKDLDRRA 593
+Q ++L L + ++ E + A +L + + + YR++E + ++ +
Sbjct: 508 ----TTEQVEVADLINKLEQTQQAAEREREEAETLRRDSEKLKERYRQLEQQLRE---KR 560
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI---VE 650
L K ++ + + A+++ D V++ ++L + +A + S I+++ + + + V
Sbjct: 561 ESLLEKAQEEAARLVRNARLEADEAVKELRSKLAEENAKDRESAIQQARNKLQRVTSKVA 620
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
A P+ V P G+QV + K A V+ V GD+ V VQ G M++ V
Sbjct: 621 AKVPER--VVPGEIPRQVKP--GQQVFLPKYNQK-AYVLSVSGDN--VQVQVGIMKMFV- 672
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
P LR+ E++ ++G + + + + SLDLRGM
Sbjct: 673 -----------------PLKELRRVAEEKV--TSGQTQVGKVFMEKANSIGTSLDLRGMT 713
Query: 771 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMN 826
+EA +++ L A + + +IHG GTG ++ V L++HPRV + + +
Sbjct: 714 GDEALLEIEKYLDDALLAGLNSVILIHGKGTGALRAAVHRELKSHPRVKSFRLGEAGEGS 773
Query: 827 YGCTVAYIK 835
G TV +K
Sbjct: 774 SGATVVELK 782
>gi|357057959|ref|ZP_09118816.1| hypothetical protein HMPREF9334_00533 [Selenomonas infelix ATCC
43532]
gi|355374536|gb|EHG21830.1| hypothetical protein HMPREF9334_00533 [Selenomonas infelix ATCC
43532]
Length = 784
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 246/830 (29%), Positives = 397/830 (47%), Gaps = 113/830 (13%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
++ IP G +E +L ++T+ A+ + Q+Q I D+ +L A G +L E+ +
Sbjct: 32 RSVIPSG-DYDEVVRLHHETAEAVQVQQTQSPPFGGIYDLRTLLKKASMGAVLEIDELRS 90
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNC--NFLTELEEKIGFCIDCKLL 125
V T+ + NV K LD L+ + +E+L + ++E F D
Sbjct: 91 VMSTMCGMRNV-KYFFRDLVLDVPHLKTMAKPIEILGMVERHLKDTIDEHGNFRDDASPE 149
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
L R + +L+ +A R E L ++L A Q + + ++T R R + +K
Sbjct: 150 --LRRITRELQTAQA---RVKERLSAILHDAANQKY----FQEAIVTVRDERYVIPVKQE 200
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ P G+ + S+SGAT F+EP VE NN ++ + E IL L+ EIA++
Sbjct: 201 YRNYFP-GVIHDQSASGATLFVEPLATVELNNTVRQMGLAREQEIQRILQKLSTEIAQNA 259
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + E+DL FARAG A+ M P L+ QS V ++++ +HPLL
Sbjct: 260 GILSENCTILSEMDLIFARAGLAREMQAYPPTLN-QSGV-----VHLKRARHPLL----- 308
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
P D VPIDI++ +++ITGPNTGGKT
Sbjct: 309 -----------P-------------------KDKVVPIDIELGQNFSILLITGPNTGGKT 338
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
SMKTLGL +L++++G +LP +P + I ADIGD QS+EQ+LSTFS H IV I
Sbjct: 339 VSMKTLGLLALLAQSGCFLPTAPDSEIPVYRNIYADIGDEQSIEQSLSTFSAHTRNIVRI 398
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDT 484
++ + L+L+DE+G+GTDP EG ALA SI+ + + G+AVV TTHYA L ++
Sbjct: 399 IDKAEQGDLILLDEVGAGTDPDEGAALARSIIAHFLQQ-GIAVVATTHYAVLKTYAYAES 457
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
ENA+ EF L+TLRPTYR+L G G SNA +I++ +G + I+ RA+ + ++
Sbjct: 458 GIENASVEFDLKTLRPTYRLLIGIPGASNAFSISRQLGLPQDIVARAEIYIS------EE 511
Query: 545 HRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
H E + L E++ E++ R + AEI + + E + L L K ++
Sbjct: 512 HTHFEHVVNELEREKQDYETKNRELRNKEAEIKSVEARLRAERETLSNTRQELLHKAREE 571
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI------------AAIVEA 651
+ A+ + ++ ++Q D E +I+E+ + + A+ +
Sbjct: 572 ANNIVREARRSAEETIKSLKDQFDDHGVKERRKVIQEARNRLDEAYIQDSLQKNPAVGKT 631
Query: 652 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
RPDD S G+ V+++SL + TV+ V G + T VQ G +R VK
Sbjct: 632 IRPDDIRS-------------GDIVYIESLAQE-GTVLSVQGKELT--VQVGGLRTIVK- 674
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
+A R + ++ + + + A P + D+RGM V
Sbjct: 675 -----------MSACTFVTRKKPKKNTKVHVGTSIAQKTAEIRPEI-------DVRGMTV 716
Query: 772 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
EA L I A + S + VIHG GTG +++ + + L++H V +
Sbjct: 717 LEAEAVLGKFIDDAVFTGLSKILVIHGKGTGALRQGLQDYLKHHRSVLSF 766
>gi|257439769|ref|ZP_05615524.1| MutS2 protein [Faecalibacterium prausnitzii A2-165]
gi|257197789|gb|EEU96073.1| MutS2 family protein [Faecalibacterium prausnitzii A2-165]
Length = 803
Score = 280 bits (716), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 249/831 (29%), Positives = 399/831 (48%), Gaps = 115/831 (13%)
Query: 18 EESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+E + L QT A +L + P +E ++ ++ AV G +LS E+ V LR
Sbjct: 41 DEVRYALEQTDAINSLLIKNGSP-RFGGVEGVSSLVARAVKGGVLSMGELLMVAGALRNF 99
Query: 76 NNV--WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI---DCKLLIILDR 130
N+ W +E L D +L LE++I I D + D
Sbjct: 100 QNLTSWYGSSEHDALPTD---------DLFYALAPQPGLEQQISSAILAPDA----MADT 146
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
AS L +R + + ++ L+ + + + + + +++ R R V +K+ ++ +
Sbjct: 147 ASHTLNELRKKIRATENSIRDRLESMVRNMDTSKYLQESVVSIRNGRYVVPVKSEYRGEV 206
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI +VSS+GAT F+EP+ VE N ++ E E IL TA++A E + +Y
Sbjct: 207 -SGIIHDVSSTGATVFVEPQAVVEANARILQYRAQEAQEIERILVAFTAQVAAIEPQFQY 265
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+LEID+ A+A A M P V DSS ++ +HPL+
Sbjct: 266 SYKAMLEIDVLLAKARLALDMKAFKP------SVRTDSSFSLIRARHPLI---------- 309
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K VP+DI + E ++ITGPNTGGKT ++KT
Sbjct: 310 -----DPKKC--------------------VPVDIALGKEYDSLIITGPNTGGKTVTLKT 344
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
GL M++ G +PA + FD L DIGD QS+EQ+LSTFSGH+ +I ILEL
Sbjct: 345 AGLLCAMAQCGFLIPADERSEICVFDEFLVDIGDEQSIEQSLSTFSGHMKKITGILELAM 404
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+LVL+DE+G+GTDP+EG ALA +I++ LR R L + TTHYA+L + NA+
Sbjct: 405 PHTLVLLDELGAGTDPAEGAALAVAIIEELRRRGVLLMATTHYAELKVFALETKGVVNAS 464
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF LETLRPTY++ G G SNA I++ +G ++I+ AQ
Sbjct: 465 CEFDLETLRPTYKLSVGVPGKSNAFLISEKLGIPERVIEAAQ------------------ 506
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH-LKAKE------TQQ 603
Q L E ++L++ L ++ +E +DE ++L A+H L+A + QQ
Sbjct: 507 -QHLSAEDKRLDAVLGQLDDLKLQL----KESQDEVEELKNEASHQLEAAQKKRDELIQQ 561
Query: 604 VQQELNFAKV-------QIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPD 655
+ EL A+ Q+++ ++LR DE S ++++ A A E+ +
Sbjct: 562 GENELEAARAKARALAQQVESKAYALTDELRQLQKDERLSTQQKAQRAREIAKKESEKLF 621
Query: 656 DDFSVSETNTSSFTP----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
V F P + G++V + L ++LATV+ +P + VLV+ G ++ ++
Sbjct: 622 IGTEVVHNPVKEFVPLKEVKVGQEVCIAEL-NQLATVLALPDKNGDVLVRAGIIKTKIPL 680
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS-KNSLDLRGMR 770
++ P+ K P P+ + QQ R S G +N RVQ S K L+L G+
Sbjct: 681 KGLKQ-PD---KLIKEPQPKTKAQQ--RYSRLTGDANRLNGRVERVQRSAKMELNLLGLT 734
Query: 771 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
V+EA ++D I A ++V+++IHG GTG ++ + + LR + V +
Sbjct: 735 VDEALPEVDAYIDRAILNGQTVVYLIHGNGTGALRTAIHKHLRGNRMVKSF 785
>gi|170761509|ref|YP_001788443.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum A3 str. Loch Maree]
gi|238688791|sp|B1L0S3.1|MUTS2_CLOBM RecName: Full=MutS2 protein
gi|169408498|gb|ACA56909.1| MutS2 family protein [Clostridium botulinum A3 str. Loch Maree]
Length = 788
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 240/831 (28%), Positives = 406/831 (48%), Gaps = 92/831 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI + A G L P ++ + L
Sbjct: 39 SVYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRNGIYLAEKGSALLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEI-ADRAS 150
Query: 133 EDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K + ++SL++ ++ + + + T R R + +K HK
Sbjct: 151 SILYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKVEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L + EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGAKIIATTHYSELKAYALRKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
EL Q+L E+ K + AR A +L E ++ E++ + L + + ++ + +
Sbjct: 518 ELIQNLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARREAKNII 577
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
AK + D +++D R + + ++E + +++ + +V +
Sbjct: 578 KEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHKGEALKN 637
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+ + +K N
Sbjct: 638 VKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKDLRAAKGSNF--- 689
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
+ ++ + + ++ ++S+DLRGM EEA + +D L A
Sbjct: 690 ------------NINSSKTKKSKKLNLNLRKVESSVDLRGMDAEEAIYTVDKYLDEAYLG 737
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+ ++HG GTGV+++ ++++L+ HP V ++ + G TV IK
Sbjct: 738 GLGEVTIVHGKGTGVLRKTIMDMLKGHPHVKRHRLGEYGEGGTGVTVVEIK 788
>gi|339442882|ref|YP_004708887.1| MutS-like ATPase involved in mismatch repair, family 1 [Clostridium
sp. SY8519]
gi|338902283|dbj|BAK47785.1| MutS-like ATPase involved in mismatch repair, family 1 [Clostridium
sp. SY8519]
Length = 792
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 254/817 (31%), Positives = 403/817 (49%), Gaps = 114/817 (13%)
Query: 26 QTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR--AVNNVWKKL 82
+T+ A A +++S L S +++ + G +L+ +E+ AV R LR A + K
Sbjct: 49 ETADAFARLLKSGKLTFSGLKNPKASMKRLEIGGVLNTAELLAVSRLLRIAAKAKAYGK- 107
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
E +L DSLQ EL + L E+I CI + I D AS L IR
Sbjct: 108 PEREDLPTDSLQ------ELFDRLEPVPGLAEEIDRCILAEDEIS-DDASPKLRQIRRTI 160
Query: 143 KRNMENLDSLLKKV----AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
E + S L ++ A +I+ + P++T R R C+ +KA +K +P G+ +
Sbjct: 161 NGMSERIHSALNRIVNSSAGRIY----LQDPIVTMRSGRYCLPVKAEYKAQIP-GMVHDQ 215
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEET-AILSLLTAEIAKSEREIK--YLMDRV 255
SSSG T F+EP V+ NN E+R + + AEE IL+ L+++ A+ +I+ ++ R+
Sbjct: 216 SSSGNTLFIEPVSVVKLNN-ELRETYLKEAEEIDVILARLSSDTAEYSAQIQEDFITCRL 274
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
L D FA+ +AQ ++G+ P+ +++ I I +HPLL
Sbjct: 275 L--DFIFAKGRYAQAINGMAPVFNTEG------IIRIRRGRHPLL--------------- 311
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P K VPID+ + + V+V+TGPNTGGKT S+KT+GL +
Sbjct: 312 DPKKV--------------------VPIDVSLGEDYHVLVVTGPNTGGKTVSLKTVGLLT 351
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM +AG+++PA + +L FD + ADIGD QS+EQ+LSTFS HI+ +V I ++ SLV
Sbjct: 352 LMGQAGMHIPAADRSQLAVFDEVFADIGDEQSIEQSLSTFSSHITNMVSIFRQMNPNSLV 411
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+ +GTDP+EG ALA SIL LR R + TTHY+++ ENA+ EF +
Sbjct: 412 LFDELCAGTDPNEGAALAISILDDLRSRGIRTMATTHYSEMKIYALSTEGVENASCEFDV 471
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
ETL PTYR++ G G SNA I++ +G +I A+ +RL E + ++ L
Sbjct: 472 ETLSPTYRLVTGVPGKSNAFAISQRLGLPESLIDGAR---QRLSQEAESF--EDVIADLE 526
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
+ R +E + + A EI + E+ + L+ R L A+ ++ Q L AK
Sbjct: 527 QSRHTIEQEQQQIARYKTEIETMKEELAESRNKLEARRDKLIAEANEEAAQILREAKEVA 586
Query: 616 DTVVQDF----ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ 671
D ++ F +N L DA+A E K+ E + +A+R + +
Sbjct: 587 DDTIRKFRKYGKNGL-DAAAME-----KDREKVRKQLDKANRNAVQKKKQKIENHQVPKK 640
Query: 672 F--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 729
G+ V V S+ K TV +P + ++VQ G +R +V NIR +
Sbjct: 641 LMIGDSVKVLSMNLK-GTVHTLPNEKGDLMVQMGILRYKV---NIRDLV----------- 685
Query: 730 PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS-----LDLRGMRVEEASHQLDIAL-- 782
L + ++ S G++ R++ SK+S ++L G +V+EA LD L
Sbjct: 686 --LINEDAPSKAQSRGTTM------GRMKMSKSSQVRPEINLIGKKVDEALSLLDKYLDD 737
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + + V+HG GTG +++ V + L+ V Y
Sbjct: 738 AYLANMHNVRVVHGKGTGALRKAVHQYLKTQKHVKSY 774
>gi|227513131|ref|ZP_03943180.1| MutS family DNA mismatch repair protein [Lactobacillus buchneri
ATCC 11577]
gi|227083706|gb|EEI19018.1| MutS family DNA mismatch repair protein [Lactobacillus buchneri
ATCC 11577]
Length = 788
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 238/802 (29%), Positives = 380/802 (47%), Gaps = 109/802 (13%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
I N+++SG LS I + R +R +N+ + D + + +++ +
Sbjct: 80 IENASLSGTELS--HITKLLRAVRTINDFFDNFQ-------DEDVNLTVVSQIVSQLTLM 130
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
E+ +++ I+ ILD AS +L IR R ++ S + K + G K
Sbjct: 131 PEITKRMVQSINEDG-SILDTASSELRTIRRTINRTQNDIRSRMGK-----YLKGSDSKY 184
Query: 170 L----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
L IT R R + I+A +K GI + S+SG T ++EP VE NN R +
Sbjct: 185 LTESIITMREDRFVLPIRADYKQHFG-GIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLA 243
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E AEE IL+ LT I E+ M+ V ++D A+A FA + V P +S
Sbjct: 244 ERAEERRILAELTDLIRPYRSELLNNMNLVGQLDFVNAKAKFAHQIRAVQP------EIS 297
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
D+ +N+ +HPL+ + V DI
Sbjct: 298 RDNVVNLRQARHPLIARGKV-----------------------------------VANDI 322
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
++ E R ++ITGPNTGGKT ++KT+GL LM ++GL++ A ++ FD + ADIGD
Sbjct: 323 QIGDEYRTIIITGPNTGGKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFADIGDD 382
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+E NLSTFS H+ I+ IL +S +SL+L+DE+G+GTDP EG ALA +I+ +
Sbjct: 383 QSIEANLSTFSSHMDNIISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAIHQSGC 442
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY +L + NA+ EF +ETLRPTYR L G G SNALNIA +G +
Sbjct: 443 ELIATTHYPELKAYAYNRSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIASKLGLSK 502
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHAEIMDLYREIE 583
II++A+ + + Q+ +E +L+ Q + LH ++ + + + +
Sbjct: 503 GIIEKARAFTDSENQDINNMIDELTAQTKRAHDEADQLDEQLTDSTKLHDDLQNQFTQYQ 562
Query: 584 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE- 642
++ KD HL + +Q Q + AK+ D ++ D + + S IKE+E
Sbjct: 563 NQ-KD------HLLEQAREQANQVVEKAKISADKIIADLHKKQQQVG----QSAIKENEL 611
Query: 643 -SAIAAI----VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
A A+ V + + E F P G++V VKS G + T++ +
Sbjct: 612 IDAKGALNRLEVTPNLKKNKVLRKEKAKHDFHP--GDEVLVKSYGQQ-GTLIRQE-KNGA 667
Query: 698 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 757
VQ G +++++ +N++ K A + + Q + ++ S+G S P
Sbjct: 668 WEVQLGILKMQIDENDL-------EKAAPEKKAKQKYQTQVSRTRSSGMS-------P-- 711
Query: 758 QTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
+LDLRG R EEA ++LD I A + +IHG GTG +++ V E LR++ R
Sbjct: 712 -----TLDLRGHRYEEAMYELDRYIDSALLAGYPSVTIIHGKGTGALRKGVTEYLRSNAR 766
Query: 816 VAKYEQESPM--NYGCTVAYIK 835
+ + +P G TV K
Sbjct: 767 IKSFGYSAPNAGGDGSTVVKFK 788
>gi|442804258|ref|YP_007372407.1| MutS2 protein MutS [Clostridium stercorarium subsp. stercorarium
DSM 8532]
gi|442740108|gb|AGC67797.1| MutS2 protein MutS [Clostridium stercorarium subsp. stercorarium
DSM 8532]
Length = 794
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 239/823 (29%), Positives = 379/823 (46%), Gaps = 109/823 (13%)
Query: 18 EESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
EE ++ L +T+ A+ +++ L I DI + A +G +L P E+ + LR
Sbjct: 41 EEIKRTLRETTDAVTCILRKGSPPLGGIHDIRPYIQRAEAGGMLYPGELLKIADVLRVSR 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
N+ +++ D L+ + + L LEE++ I+ + + D AS L
Sbjct: 101 NLKNYVSQ----DKMELEETNTVYVLCSGLGTDRTLEERLNQAIENEEELS-DYASPALA 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +R + + L + + ++T R R + +KA ++ P G+
Sbjct: 156 AIRRDIRRMQDAVKDKLNSIIRSAQNRKIMQDAVVTLRGDRYVIPVKAEYRSQFP-GLVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+VS SGAT F+EP VE NN +L E E IL+ LT E+AK +K + +
Sbjct: 215 DVSQSGATIFVEPMAVVELNNEIRQLKIKEEREVERILTELTGEVAKISEMLKANVKLLA 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
ID FA+A + + G P+L+ + + +HPL+ +
Sbjct: 275 LIDFVFAKARLSLDLKGTEPVLNKERRIVIKKG------RHPLI---------------D 313
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P VP+DI + + +VITGPNTGGKT ++KT+GL L
Sbjct: 314 PA--------------------VVVPVDISLGEDFTTMVITGPNTGGKTVTLKTMGLFVL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA + + F + ADIGD QS+EQ+LSTFS H++ IV IL V SLVL
Sbjct: 354 MTQAGLHIPAAENSEMCVFTKVFADIGDEQSIEQSLSTFSAHMTNIVGILREVDENSLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP+EG ALA +IL L R + TTHY++L NA EF +E
Sbjct: 414 FDELGAGTDPTEGAALAKAILDRLTKRGIRTMATTHYSELKIYAMTTPGVRNACCEFDVE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE----------------RLRP 540
TLRPTYR+L G G SNA I+ +G D II+ A++ + RL
Sbjct: 474 TLRPTYRLLIGIPGRSNAFAISLRLGLDEGIIEEAKRFMRGEDIQFEELLSDIQKNRLET 533
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
E+++ R + + R+ E Q + I++ R+ EA+ + A +A+E
Sbjct: 534 EKERERAYRELKEIERLRQAAEEQRKKTEDEKESILNQARK---EARAILANARR-QAEE 589
Query: 601 TQQVQQELNFAKVQ--IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
+ +EL A Q ID + + LR + E ++ +A + R D
Sbjct: 590 IMERLKELEKAYQQRNIDREMMELRQNLRKT--------MNELDAQMAETILPRRGDG-- 639
Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
+ P G+ V + +L + TV+E P D VL+Q G M+V++ ++P+
Sbjct: 640 ----KPPENLKP--GDTVMIINLNQR-GTVLEAPDKDGNVLIQAGIMKVKMHITQLKPVD 692
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
+ + R+R + S S E LD+RG+ EEA ++
Sbjct: 693 EQQEVMSTIQNTRVRSVK------SKSISLE--------------LDIRGLTTEEARERI 732
Query: 779 D--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
D I A + +IHG GTG +++ V + L HP V +
Sbjct: 733 DKYIDDAIIAGLHEVSIIHGKGTGALRKSVHDFLSRHPHVETF 775
>gi|320162401|ref|YP_004175626.1| MutS2 family protein [Anaerolinea thermophila UNI-1]
gi|319996255|dbj|BAJ65026.1| MutS2 family protein [Anaerolinea thermophila UNI-1]
Length = 808
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 252/850 (29%), Positives = 408/850 (48%), Gaps = 110/850 (12%)
Query: 15 KSLEESQKLLNQTSAA-LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
+ LEE+Q+L TS A L + + + + DI ++ A +L P+E+ A++ TL
Sbjct: 38 RRLEEAQRLQKITSEARLLLSLNSEIGVGGASDIRPLVERAARHGVLEPAELLAIKDTLI 97
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI-----IL 128
+ + + SL+R LL L G ++ IL
Sbjct: 98 SARTIAR-----------SLERKESTFPLL--AEIAAPLVPPPGLIETISRVVSERGEIL 144
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D ASE L +R E K E L + L+ + A + LIT+R R + ++A K
Sbjct: 145 DSASETLARLRREVKVAFERLMTRLEHMVNDPRIAPMLQDSLITQRNGRYVIPLRAEFKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNN----MEVRLSNSEIAEETAILSLLTAEIAKS 244
+ I + SSSGAT F+EP V+ NN +++R+ + EE IL+ L+ ++
Sbjct: 205 QV-RSIIHDQSSSGATLFVEPLAVVDLNNEWHELQLRVRD----EERRILAELSDQVGAH 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ L + + D A A A +A+ + P+L H + HP GS+
Sbjct: 260 FEALAALTEALARFDFALACAKYAEDLRASEPVLVRYRHPARPD--------HP---GST 308
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+R + A +P TV VPID+ ++ +T VVITGPNTGGK
Sbjct: 309 IRLIQARHPLLDP---------QTV-----------VPIDVDLDEDTFCVVITGPNTGGK 348
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT+GL +LM+++GL++PA++ L F+ + ADIGD QS+EQ+LSTFSGHI I
Sbjct: 349 TVTLKTVGLLALMAQSGLHIPARSGSELSVFENVFADIGDEQSIEQSLSTFSGHIKNISR 408
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
IL + +LVL DE+G+GTDP EG ALA +IL ++ ++ ++ THY +L
Sbjct: 409 ILRRANTHTLVLFDELGAGTDPQEGAALARAILAHMVEKRIPCLIATHYPELKIFAHNTP 468
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE- 541
NA+ EF L TLRPTY + G G SNAL IA +G D II++A+ + E LR E
Sbjct: 469 GVINASMEFDLNTLRPTYHLTLGLPGRSNALAIASRLGLDPVIIEKARAEISPEELRAEN 528
Query: 542 ------RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
RQ+ + +E+R++E L AE+ +IE+E + L +
Sbjct: 529 LLNEIHRQRDAARRARERAEKEQREVE-------RLRAELAARLEKIEEERQRLLEKVRE 581
Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFE--NQLRDASADEINSLIKESESAIAAIVEAHR 653
+E + +++E+ + Q+ Q E LR+ S +L++ + +A+
Sbjct: 582 EAEQEAEALRREVEEVRRQLMRARQPLEALQPLREKS----EALVENARTAL-------- 629
Query: 654 PDDDFSVSETNTSSFTPQF----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
S ++ PQ G++V V+SLG + V+ G++D VQ G +RVR
Sbjct: 630 ----VSTPAAGETTLPPQHPFRAGDKVRVRSLG--MQGVITALGEEDAE-VQVGNLRVRA 682
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
+ ++++ +K+AA PA ++ R + + E + Y P + +DLRG
Sbjct: 683 RLSDLQ---KPGQKDAAEPAAPVKAAARGRTTLKTAAPAEVSVYYP---SPGMEIDLRGQ 736
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPM 825
E+A L+ L A + +IHG GTG +++ + + L P V + ++
Sbjct: 737 LAEDALDALERYLEAAVLAGLPFVRIIHGKGTGKLRQVIRQALDASPHVKSHSPGEDREG 796
Query: 826 NYGCTVAYIK 835
G T+A +K
Sbjct: 797 GEGVTIARLK 806
>gi|344996322|ref|YP_004798665.1| MutS2 protein [Caldicellulosiruptor lactoaceticus 6A]
gi|343964541|gb|AEM73688.1| MutS2 protein [Caldicellulosiruptor lactoaceticus 6A]
Length = 786
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 235/791 (29%), Positives = 389/791 (49%), Gaps = 110/791 (13%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSL----QRYSPLLE 101
DI+ IL A + +L+P EI V + L+ V L A D L +R L E
Sbjct: 70 DISLILKKARAQAILTPHEILEVEKVLKLSQEVRSYLANA---DSSYLKTIRERLFNLKE 126
Query: 102 LLKNCN--FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME-----NLDSLLK 154
++ + FLT E ILD AS L+ IR +R R +E L+ +++
Sbjct: 127 IIARIDQTFLTPEE-------------ILDTASPRLKEIR-DRIRRLEARIRDELNKMIR 172
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
Q F + +P+IT R ++ + +KA HK + GI + S++GAT F+EP VE
Sbjct: 173 DPKIQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGATLFVEPFVCVE 227
Query: 215 FNNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
+N ++R++ SE EE IL L+ I+ S EIK + + E+D+ F +A +A
Sbjct: 228 ISN-QIRVARSEEKEEIERILQELSQLISDSYNEIKQNFESLSELDILFTKAQWAHQFRA 286
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PIL++ + IN++ +HPL+ +
Sbjct: 287 SKPILNTAGY------INLKKARHPLIEKEKV---------------------------- 312
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
VPID+ + E V+VITGPNTGGKT ++KT+GL L++++G++LPA +
Sbjct: 313 -------VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGIFLPADEGSEVC 365
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+ Q+LSTFS H+ I++I + +LVL+DEIGSGTDP EG ALA
Sbjct: 366 VFSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALA 425
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
+IL++L + V TTHY +L ++ RFENA+ EF + TL+PTYR+L G G SN
Sbjct: 426 KAILKFLFKKGSKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSN 485
Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
AL I+ ++G +I++ A+ + + E +++ + +R++LE A L
Sbjct: 486 ALYISSNLGLKEEIVELAKSYMSKKTLEL-----TDIINEMERKRKELEETLENANKLKI 540
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E +L + +E+E + + +K + +++ ++ F + D V + F+ + A + +
Sbjct: 541 EAENLKKTLEEERRRFEAEKQRIKERASREARE---FVQRVEDEVEKLFKELRKIAESLK 597
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVE 690
++K+ E + + S E S P+ G++V+VKS D V
Sbjct: 598 EKEMLKQLEEKKREYENLVKSIEQASQKEEKLQSKLPENLRLGQKVYVKSF-DAEGFVES 656
Query: 691 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 750
+P + V+ G M++ V +++ I +E+ + + SS +
Sbjct: 657 LPDSKGNLTVRIGIMKLSVNISDVFEI------------------EEETATKNLVSSKKA 698
Query: 751 ASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLE 808
+ + S+D+RG ++A ++D L A + +IHG GTGV+++ +
Sbjct: 699 VEVNQK--SIDMSIDVRGKTSDDAILEVDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIRN 756
Query: 809 ILRNHPRVAKY 819
LR HP V +
Sbjct: 757 FLRRHPHVKSF 767
>gi|402833826|ref|ZP_10882436.1| MutS2 family protein [Selenomonas sp. CM52]
gi|402279672|gb|EJU28454.1| MutS2 family protein [Selenomonas sp. CM52]
Length = 791
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 245/832 (29%), Positives = 398/832 (47%), Gaps = 110/832 (13%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+A +P G E ++LL +T A+ + + + DI L A G +L +
Sbjct: 32 RAVLPSG-DFAEVEELLRETEEAVRLSAFSSPPMGGVFDIRESLAKAERGAVLDLGDFTD 90
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ T+RA+ V K+ + E+D PL+ E K L +LE ++ +D +
Sbjct: 91 LLSTMRAMRAV-KRFFKEVEMD-------LPLIKEQAKGIEILGQLERRLENSVD-EHGN 141
Query: 127 ILDRASEDLELIRAERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+LD AS +L IR E + E ++++L + Q F +IT+R R + I
Sbjct: 142 LLDDASVELSRIRRELRSGRRRAKEQMEAILHRTEYQKF----FQDAIITQRAERNVIPI 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ P GI + S+SGAT F+EP V+ NN +L+ +E E IL LL+ E+
Sbjct: 198 KQEYRQSFP-GIVHDQSASGATLFIEPMALVDLNNDLKQLALAEKTEVQRILRLLSQEVG 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
K+ ++ + +D FARA A M P ++ + ++ +HPL+
Sbjct: 257 KNGSVLEGNCAILASLDFIFARAKLAADMQATRPAINREGRTKLVAA------RHPLIDA 310
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
+ + VPIDI + R+++ITGPNTG
Sbjct: 311 AKV-----------------------------------VPIDIALGESYRMLLITGPNTG 335
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT S+KT+GL +LM ++G Y+PA + + + IGD QS+EQ+LSTFS H+S +
Sbjct: 336 GKTVSLKTIGLFALMVQSGCYIPAAAGSEISVYTNVYTVIGDEQSIEQSLSTFSAHMSHL 395
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V +LE V L+L+DEIG+GTDP EG ALA +IL+ R +VTTHY++L
Sbjct: 396 VKLLECVEGTDLLLLDEIGAGTDPEEGAALAMAILEQFLARGASTIVTTHYSELKTFAFT 455
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
ENA EF +ETLRPTYR+L G G SNA I++ +G I RAQ+ ++ +
Sbjct: 456 REGIENACVEFDVETLRPTYRLLTGMPGASNAFAISRRLGLSEAAILRAQQFIKADHAQF 515
Query: 543 QQHRKSELYQSLMEERRK---LESQARTAASLHAEIMDLYREIEDEAKDLDRRA----AH 595
++ + LM E+R LE Q R A L + L EI ++ + + ++A A+
Sbjct: 516 EKVVNQLESEKLMYEQRNADILERQQRV-AKLEEKTQALKDEIREKKEQMLKKARQESAN 574
Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
L + ++ ++ + KVQ D D + R + E ++E+ A R
Sbjct: 575 LVRRTRREAEEIIKSLKVQFD----DLGIESRRRAMQEAREKLQEA---------AERSR 621
Query: 656 DDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ Q G+ V+V+ L D+ ATV+++ G + + VQ G ++ VK
Sbjct: 622 TGLLPGKAYKEKIDMQKLAVGDVVYVRKL-DQKATVLKIQGAN--IEVQLGNLKTYVKAG 678
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN---SLDLRGM 769
+ R + ++++ PA R GS G+ G +Q + N +D+RG+
Sbjct: 679 DCRFVERARKE---QPAAR----------GSGGTKG----AGALLQKTANLHREIDVRGL 721
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
V+EA L L A + +IHG GTG +++ + + L++H VA++
Sbjct: 722 MVDEAEQVLGKFLDDAVVGGLGQVLIIHGKGTGALRKGIHDYLKHHKSVARF 773
>gi|225574101|ref|ZP_03782712.1| hypothetical protein RUMHYD_02166 [Blautia hydrogenotrophica DSM
10507]
gi|225038701|gb|EEG48947.1| MutS2 family protein [Blautia hydrogenotrophica DSM 10507]
Length = 793
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 246/840 (29%), Positives = 388/840 (46%), Gaps = 114/840 (13%)
Query: 8 KAQIPFGKSL----------EESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVS 56
KA P GK+L E+ Q + QT AL+ + Q L ++DI G +
Sbjct: 21 KASSPMGKNLCKDLKPCRDLEQIQTMQTQTKDALSRLFQKGTLSFHKVKDIRGSIKRLEI 80
Query: 57 GQLLSPSE---ICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELE 113
G L E IC+V + + E D L + +N LT L
Sbjct: 81 GSTLGIGELLDICSVLENTAKAKSYGRFDRETETCDS--------LDAMFQNLEPLTPLS 132
Query: 114 EKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKP 169
+I CI + I D AS L+ +R K R L+SLL A Q G
Sbjct: 133 SEIRRCILSEEEIS-DDASPGLKQVRRSMKITNDRIHSQLNSLLNGSARSYLQDG----- 186
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R C+ +KA +K +P G+ + SS+G+T F+EP V+ NN +L E E
Sbjct: 187 VITMRNGRYCLPVKAEYKGQVP-GMIHDQSSTGSTLFIEPMSVVKLNNDLRQLEIQEQKE 245
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
+LS L+ + A+ + + ++ ++E+D FARAG A + +S+ + D
Sbjct: 246 IEIVLSDLSEQAAQYQEVLTDNLNILIELDFIFARAGLALEHN------ASEPQFNTDGK 299
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
I ++ +HPL+ + VPIDI++
Sbjct: 300 IQLKKARHPLIHKKQV-----------------------------------VPIDIRLGD 324
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ ++V+TGPNTGGKT S+KT+GL +LM ++GL++PA +H L F+ + ADIGD QS+E
Sbjct: 325 DFDLLVVTGPNTGGKTVSLKTVGLLTLMGQSGLHIPAGDHSVLSVFEEVYADIGDEQSIE 384
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ +V LE + +SLVL DE+G+GTDP+EG ALA +IL +L + +
Sbjct: 385 QSLSTFSSHMTNVVSFLEKATDKSLVLFDELGAGTDPTEGAALAIAILSHLHRQGIRTMA 444
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY++L ENA+ EF +ETLRPTYR+L G G SNA I+ +G II+
Sbjct: 445 TTHYSELKVYALSTPGVENASCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLPDFIIE 504
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
+A++ + Q ++ L R LE + AEI L +++E++ +
Sbjct: 505 KAKEQI-----SEQDESFEDVISKLEASRITLEKEQLEIQQYKAEIESLKKQLEEKQEKF 559
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD--ASAD------EINSLIKES 641
D R + + +Q + L AK D ++ F ++ ++AD + + +
Sbjct: 560 DARKEKIIREANEQAHEILREAKEYADQTMKTFHKFQKEHISTADVENERQNLRKKMSKL 619
Query: 642 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
E +A + +P S+ + G V + S+ + TV P + VQ
Sbjct: 620 EKNMAMKPKKSQPGKRLRPSDLS-------IGASVKIISM-NLTGTVSTKPDAKGNLFVQ 671
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G R +V +++ + P + + + + S SA S E
Sbjct: 672 TGIFRTQVHLSDLELVDEVV---VNTPLMQRTRAGKIKMSKSANVSTE------------ 716
Query: 762 NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
++L G V+EA +LD L A S + ++HG GTG +++ V LR VA Y
Sbjct: 717 --INLLGKTVDEAIAELDKYLDDAYIAHLSSVRIVHGKGTGALRKGVHNYLRRQKHVATY 774
>gi|158320865|ref|YP_001513372.1| MutS2 family protein [Alkaliphilus oremlandii OhILAs]
gi|229486331|sp|A8MHU4.1|MUTS2_ALKOO RecName: Full=MutS2 protein
gi|158141064|gb|ABW19376.1| MutS2 family protein [Alkaliphilus oremlandii OhILAs]
Length = 790
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 238/787 (30%), Positives = 392/787 (49%), Gaps = 87/787 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I D++ L G L P ++ ++ TL A + L D Y +
Sbjct: 65 LGGIHDVSQYLRRTEIGSYLDPGQLLQLKETLAAARRMKTFLK-----DDKKESTYPIIQ 119
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
EL N + L +E+KI CI + + D AS +L IR R+ + +N D++ K+ + I
Sbjct: 120 ELGNNISSLKHIEDKIELCIISETELS-DNASPELRNIR--RQISSKN-DAIRNKLNSII 175
Query: 161 FQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
A + P+IT R+ R V +K H+ +P G+ + SSSGAT F+EP VE NN
Sbjct: 176 TSASNQKYLQDPIITMRQDRYVVPVKQEHRGNIP-GLIHDQSSSGATIFVEPMAVVELNN 234
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E E IL + A IA+ +IK + E+D FA+ + M V P+
Sbjct: 235 QLKELRLKEQVEIERILMEIAAMIAERSDDIKSNQIILKELDFIFAKGKLSVEMRAVEPV 294
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
L++ +S I+ +HPLL P V N+ M +G
Sbjct: 295 LNTNKKIS------IKNGRHPLL----------------PSNKVVPNT-MWLGE------ 325
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
DF +VITGPNTGGKT ++KTLGL +LM+++GL++PA +L FD
Sbjct: 326 DF------------HTLVITGPNTGGKTVTLKTLGLLTLMAQSGLHVPADYGTKLAIFDQ 373
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
+ ADIGD QS+EQ+LSTFS H++ IV+I++ V+ +SLVL DE+G+GTDP+EG ALA +IL
Sbjct: 374 VFADIGDEQSIEQSLSTFSSHMTNIVNIMDNVTEQSLVLFDELGAGTDPTEGAALAMAIL 433
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
LR+ + V TTHY++L ENA+ EF + TL PTY++L G G SNA I
Sbjct: 434 NSLREMGTVTVATTHYSELKQYALSTEGVENASVEFDVNTLSPTYKLLIGVPGKSNAFEI 493
Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 577
++ +G +IQR+++L+ R+ + +L Q++ + R E + AA L E
Sbjct: 494 SRKLGLSDFLIQRSKELL-----TREDIQFEDLLQNIEKNRSTAEKEKDEAARLRMETQK 548
Query: 578 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL 637
L E ++ + L + L + ++ + + AK+ D +V++ + + E+N
Sbjct: 549 LREEYYEKKQQLQTQKEKLISDAKREAYKIVKQAKLDADEIVENLKTLRAELEEKEMNKK 608
Query: 638 IKESESAIAAIVE--AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD- 694
I+E+ ++ + A + + + GE V++ SL +++ V+ +P D
Sbjct: 609 IEEARKNLSDQMGKLAENMGEKLVLKTNKKPPKNLKIGESVNILSL-NQIGYVI-LPEDA 666
Query: 695 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 754
+ V +Q G M+V + +N+ R++++++ +++G +A
Sbjct: 667 NGEVQLQVGIMKVNMHVSNLE---------------RIKEEKDTKKTGVGKIVKSKA--- 708
Query: 755 PRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRN 812
+ K +D+RG +EEA +D L A + + +IHG+GTGV+ + ++L+
Sbjct: 709 ---ENIKMEIDVRGQNLEEAMLNVDKYLDDAYIAGLTHVTIIHGVGTGVLSAGLKQMLKK 765
Query: 813 HPRVAKY 819
H +
Sbjct: 766 HKHTKSF 772
>gi|373116161|ref|ZP_09530317.1| MutS2 family protein [Lachnospiraceae bacterium 7_1_58FAA]
gi|371669625|gb|EHO34724.1| MutS2 family protein [Lachnospiraceae bacterium 7_1_58FAA]
Length = 789
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 242/824 (29%), Positives = 397/824 (48%), Gaps = 103/824 (12%)
Query: 18 EESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
++ Q+ L++TSAA+ M ++ P S ++ +A L A G L+ E+ + LRA
Sbjct: 44 DDVQRALDETSAAVDMSALRGSP-SFSGVKPVAASLQRAHMGGALNTRELLDIAAVLRAA 102
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ + G+ +R ++ L ++ LE+KI I + I D AS +
Sbjct: 103 RSAREY--------GEGDERKKTCIDHLFRSLTANRFLEDKITGSIVGEDEIA-DAASPE 153
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR + + +L K+ + QA + + +IT+R R V +K+ HK +P G+
Sbjct: 154 LASIRRHIRATASKVRDILNKLLSS-NQAKYLQEAIITQRNDRFVVPVKSEHKNDVP-GL 211
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+VSSSGAT+F+EP G V+ NN L E E IL+ L+AE A+ + +I D
Sbjct: 212 VHDVSSSGATFFIEPMGVVKANNELKELQAREEKEIERILAELSAECAQFKDDITQDYDL 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
++ +D+ FARA A M P + + + + +HPLL
Sbjct: 272 LILLDVIFARAKLAYRMRACAPRI-------VERGLYLRKARHPLL-------------- 310
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
+P D V D+ + + +VITGPNTGGKT ++KT+GL
Sbjct: 311 -DP--------------------DRAVANDLMLGEDFDTLVITGPNTGGKTVTIKTIGLL 349
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM++ GL++P + R+ F +LAD+GD QS+ Q+LSTFS H+ IV IL E+L
Sbjct: 350 TLMAQCGLHIPVSDDSRVKVFRRVLADVGDEQSIAQSLSTFSSHMVNIVGILGEADDETL 409
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L DE+G+GTDP EG ALA +I++ R+ L TTHYA+L ENA+ EF+
Sbjct: 410 ILFDELGAGTDPIEGAALAAAIIESAREMGALVAATTHYAELKVYAMTTPGVENASCEFN 469
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
+++L PTYR+L G G SNA I++ +G + IIQ+A R + + R ++ L
Sbjct: 470 VDSLAPTYRLLIGIPGKSNAFAISERLGLPKSIIQKAAA-----RIDAENVRFEDVLTQL 524
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL---KAKETQQVQQE---- 607
E+R+++E + AA L RE+E+ AK A + +AK ++ Q E
Sbjct: 525 DEQRQEMEREKEAAARLR-------REMEETAKASREYKAKMEAERAKAVEKAQAEARAI 577
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSETNTS 666
L+ A+ D V ++ + R +E + + +A+ ++ EA
Sbjct: 578 LDEARDTADQVFKELNDMRRRQRKEEDWQRVNDERAALRRSLNEAEGKLGARPEEPAPPP 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
+ + G+ V + +G + ATV+ V D ++ +Q G +++ ++ +R + +++A
Sbjct: 638 TRPARAGDTVELVKMGTQ-ATVLSV-NKDGSLQLQAGILKITARQEEVRVVEGETQQSAK 695
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
R A + R + +DLRGM +EA LD+ L A
Sbjct: 696 KVVAR-------------------AEHKLRTLGASPEVDLRGMMTDEAIGALDLFLDNAV 736
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+ + +IHG GTG V++ V E L+ V + P YG
Sbjct: 737 LGKLNEVRIIHGKGTGAVRKAVREHLKRSRYVKSFR---PGRYG 777
>gi|146296717|ref|YP_001180488.1| MutS2 family protein [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|238685558|sp|A4XK62.1|MUTS2_CALS8 RecName: Full=MutS2 protein
gi|145410293|gb|ABP67297.1| MutS2 family protein [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 787
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 236/798 (29%), Positives = 394/798 (49%), Gaps = 119/798 (14%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
E+I L + G L+P EI + + L+ + L+ Q +S L +
Sbjct: 68 FENILPSLKKSKLGATLNPHEILQIGKVLKLSYEMRSYLSYT--------QDFSFLESMK 119
Query: 104 KNCNFLTELEEKIGFCIDCKLLI---ILDRASEDLELIRAERKRNMEN-----LDSLLKK 155
K L L+E I ID L ILD AS L+ IR +R R +E+ L+S+++
Sbjct: 120 KR---LVNLKEVIS-RIDQTFLTADEILDTASPRLKEIR-DRIRKLESRIRDELNSMIRD 174
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
Q F + +P+IT R ++ + +KA + + GI + S++GAT F+EP VE
Sbjct: 175 PKIQRF----LQEPIITIRGEKLLLPVKAEFRNEVK-GIVHDQSATGATLFVEPFVCVEI 229
Query: 216 NNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
+N ++R+ S+ EE IL +++ IA EI+ ++E+D+ F +A +A+ M+
Sbjct: 230 SN-QIRILKSQEKEEIERILQEISSLIASYCDEIETSFYALVELDIVFTKAIWAKEMNAS 288
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P++++ IN++ +HPL+
Sbjct: 289 KPVINTSG------IINLKKARHPLIQ--------------------------------- 309
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
D VPIDI + + V++ITGPNTGGKT ++KT+GL L+ ++G+++PA +L
Sbjct: 310 --KDKVVPIDIHLGKDFDVLIITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEDSQLCI 367
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
F I ADIGD QS+ Q+LSTFS H+ I++I + ++LVL+DEIG+GTDP EG ALA
Sbjct: 368 FQKIFADIGDDQSIVQSLSTFSAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAK 427
Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
+IL+YL ++ + TTHY +L ++ RFENA+ EF ++TL+PTYR+L G G SNA
Sbjct: 428 AILKYLSEKGSKVIATTHYGELKIFAQQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNA 487
Query: 515 LNIAKSIGFDRKIIQRA-----QKLV--ERLRPERQQHRKSELYQSLMEERRKLESQART 567
L I+ ++G D+ I++ A QK + +R+ E +Q RK + + KLE+QA
Sbjct: 488 LVISSNLGLDKGIVEMARGYLSQKTIDLDRIINEMEQKRKEAEENLELARKLKLEAQALK 547
Query: 568 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF----E 623
AA E+E K + ++ K + ++ + A+ +I+ + +D E
Sbjct: 548 AA------------YEEEKKRFETERERIRKKAINEAKEIVERAQYEIENLFKDLRKLAE 595
Query: 624 NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGD 683
N E+ +E E I +I + + + + S+T + + G++V+V+S D
Sbjct: 596 NLKEKEVLKELEEKKREYERLIQSISQQEKQEAE---SKTKKTLQNIRLGQKVYVRSF-D 651
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
+ V +P + VQ G M++ V N ++ +++ Q+ S
Sbjct: 652 AVGFVESLPDSKGNLTVQIGIMKLNV--------------NISDIEEVEEGEKKVYQTTS 697
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
E S S+D+RG ++A +D L A + +IHG GTGV
Sbjct: 698 KNVKLREKSVDL-------SIDVRGKTSDDAILDVDKYLDDAYTSGLRQVTIIHGKGTGV 750
Query: 802 VKERVLEILRNHPRVAKY 819
+++ + L+ HP V +
Sbjct: 751 LRQAIRNFLKRHPLVKSF 768
>gi|110803296|ref|YP_699161.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens SM101]
gi|122956595|sp|Q0SRU6.1|MUTS2_CLOPS RecName: Full=MutS2 protein
gi|110683797|gb|ABG87167.1| MutS2 family protein [Clostridium perfringens SM101]
Length = 786
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 227/719 (31%), Positives = 353/719 (49%), Gaps = 87/719 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G II+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNIIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ +Q L+ AK + DT++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADTILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 720
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|302871595|ref|YP_003840231.1| MutS2 family protein [Caldicellulosiruptor obsidiansis OB47]
gi|302574454|gb|ADL42245.1| MutS2 family protein [Caldicellulosiruptor obsidiansis OB47]
Length = 786
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 239/795 (30%), Positives = 396/795 (49%), Gaps = 118/795 (14%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSL----QRYSPLLE 101
DI+ +L A + +L+P EI AV R L+ V L A DG+ L +R L E
Sbjct: 70 DISLVLKKAKAQAILTPHEILAVNRILKLSQEVRSYLANA---DGNYLKSSRERLFNLKE 126
Query: 102 LLKNCN--FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME-----NLDSLLK 154
L + FLT E ILD AS L+ IR +R R +E L+ +++
Sbjct: 127 LTARIDQTFLTPEE-------------ILDTASPRLKDIR-DRIRRLEAKIRDELNRMIR 172
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
Q F + +P+IT R ++ + +KA HK + GI + S++GAT F+EP VE
Sbjct: 173 DPKIQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGATLFVEPFVCVE 227
Query: 215 FNNMEVRLSNSEIAEETAILSL-LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
+N ++R++ SE EE L L+ I+ S EIK + + E+D+ F +A +A
Sbjct: 228 ISN-QIRVARSEEKEEIEKLLQELSQLISDSYNEIKQNFESLSELDILFTKAQWAHQFRA 286
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
PIL++ + IN++ +HPL+ +
Sbjct: 287 SKPILNTAGY------INLKKARHPLIKKEKV---------------------------- 312
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
VPID+ + E V+VITGPNTGGKT ++KT+GL L++++G+++PA + +
Sbjct: 313 -------VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGVFIPADDRSEVC 365
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F I ADIGD QS+ Q+LSTFS H+ I++I + +LVL+DEIGSGTDP EG ALA
Sbjct: 366 VFSKIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALA 425
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
+IL++L ++ V TTHY +L ++ RFENA+ EF + TL+PTYR+L G G SN
Sbjct: 426 KAILKFLHNKGAKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSN 485
Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
AL I+ ++G +++II+ A+ + + E +++ + +RR+LE +A L +
Sbjct: 486 ALYISSNLGLNKEIIELAKGYMSKKTLEL-----TDIINEMERKRRELEEALESANKLKS 540
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E +L + +E+E + + +K + +++ ++ + + +++ + ++ + E
Sbjct: 541 EAEELKKTLEEERRRFEAEKQKIKERASKEAREFVQKVEDEVEKLFKELKKIAESLKEKE 600
Query: 634 INSLI----KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLA 686
+ + +E E+ + +I +A R E S P+ G++V+VKS D
Sbjct: 601 MLKQLEEKKREYENLVKSIEQASR-------KEEKLQSKLPENLRLGQKVYVKSF-DAEG 652
Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 746
V +P + V+ G M++ V NI I + + A +K E Q
Sbjct: 653 FVESLPDSKGNLTVRIGIMKLSV---NISDIFEIEEETATKNLVSSKKGVEINQ------ 703
Query: 747 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKE 804
++ S+D+RG +A ++D L A + +IHG GTGV+++
Sbjct: 704 -----------KSIDMSIDVRGKTSNDAILEVDKYLDDAYTAGLKQVTIIHGKGTGVLRQ 752
Query: 805 RVLEILRNHPRVAKY 819
+ LR HP V +
Sbjct: 753 TIRSFLRRHPHVKSF 767
>gi|312793836|ref|YP_004026759.1| muts2 family protein [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180976|gb|ADQ41146.1| MutS2 family protein [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 786
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 233/788 (29%), Positives = 389/788 (49%), Gaps = 104/788 (13%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQ-RYSPLLELLK 104
DI+ IL A + +L+P EI V + L+ V L A ++Q R L E++
Sbjct: 70 DISLILKKARAQAILTPHEILEVEKVLKLSQEVRSYLANADSSYLKTIQERLFNLKEIIA 129
Query: 105 NCN--FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME-----NLDSLLKKVA 157
+ FLT E ILD AS L+ IR +R R +E L+ +++
Sbjct: 130 RIDQTFLTPEE-------------ILDTASPRLKEIR-DRIRRLEARIRDELNKMIRDPK 175
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
Q F + +P+IT R ++ + +KA HK + GI + S++G+T F+EP VE +N
Sbjct: 176 IQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGSTLFVEPFVCVEISN 230
Query: 218 MEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
++R++ SE EE IL L+ I+ S EIK + + E+D+ F +A +A P
Sbjct: 231 -QIRVARSEEKEEIERILQELSQLISDSYNEIKQNFESLSELDILFTKARWAHQFRASKP 289
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
IL++ + IN++ +HPL+ +
Sbjct: 290 ILNTAGY------INLKKARHPLIEKEKV------------------------------- 312
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VPID+ + E V+VITGPNTGGKT ++KT+GL L++++G++LPA + F
Sbjct: 313 ----VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVCVFS 368
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+ Q+LSTFS H+ I++I + +LVL+DEIGSGTDP EG ALA +I
Sbjct: 369 KIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADSSTLVLLDEIGSGTDPEEGAALAKAI 428
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L++L + V TTHY +L ++ RFENA+ EF + TL+PTYR+L G G SNAL
Sbjct: 429 LKFLFKKGSKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSNALY 488
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+ ++G +I++ A+ + + E +++ + +R++LE A L E
Sbjct: 489 ISSNLGLKEEIVELAKSYMSKKTLEL-----TDIINEMERKRKELEETLENANKLKIEAE 543
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
+L + +E+E + + +K + +++ ++ F + D V + F+ + A + +
Sbjct: 544 NLKKTLEEERRRFEAEKQRIKERASREARE---FVQRVEDEVEKLFKELRKIAESLKEKE 600
Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPG 693
++K+ E + + S E S P+ G++V+VKS D V +P
Sbjct: 601 MLKQLEEKKREYENLVKSIEQASQKEEKLQSKLPENLRLGQKVYVKSF-DAEGFVESLPD 659
Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 753
+ V+ G M++ V +++ I +E+ + + SS +
Sbjct: 660 SKGNLTVRIGIMKLSVNISDVFEI------------------EEETATKNLVSSKKAVEV 701
Query: 754 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 811
+ + S+D+RG ++A ++D L A + +IHG GTGV+++ + LR
Sbjct: 702 NQK--SIDMSIDVRGKTSDDAILEVDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIRNFLR 759
Query: 812 NHPRVAKY 819
HP V +
Sbjct: 760 RHPHVKSF 767
>gi|160893752|ref|ZP_02074536.1| hypothetical protein CLOL250_01306 [Clostridium sp. L2-50]
gi|156864737|gb|EDO58168.1| MutS2 family protein [Clostridium sp. L2-50]
Length = 791
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 221/733 (30%), Positives = 349/733 (47%), Gaps = 79/733 (10%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
DSL YS +EL+ L L ++I CI + I D AS L+ +R +K E L
Sbjct: 117 DSL--YSRFMELVP----LEHLSQEIHRCILSESEIA-DDASSGLKAVRRNKKLTNEKLH 169
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
+ L K+ + LIT R R C+ +K +K P G+ + SSSG T F+EP
Sbjct: 170 NQLNKLVTDQSKQTMFQDNLITMRNGRYCIPVKQEYKNSFP-GMIHDQSSSGNTVFIEPL 228
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V NN L N E+AE IL L+A A IK+ + + ++D FARA FA+
Sbjct: 229 AVVNLNNQLKELDNQELAEIEKILENLSARAASEYENIKFDFETLTDLDFIFARANFARS 288
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
G PI ++ D ++I+ +HPLL + TV
Sbjct: 289 YKGTEPIFNT------DGIVDIKQGRHPLL------------------------DKHTV- 317
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VP+DI++ + +++ITGPNTGGKT S+KTLGL +LM ++GL++PA +
Sbjct: 318 ----------VPVDIRLGEDYNLLIITGPNTGGKTVSLKTLGLFTLMGQSGLHIPALDGS 367
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
RL FD + ADIGD QS+EQ+LSTFS H+S +V I+ V+ +L L DE+G GTDP EG
Sbjct: 368 RLNVFDDVFADIGDEQSIEQSLSTFSSHMSNVVYIMNHVTPNTLCLFDELGGGTDPVEGA 427
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA +IL L D+ + TTHY++L +NA+ EF + TL PTYR++ G G
Sbjct: 428 ALAIAILSSLNDQDIRCMATTHYSELKLFAMSTPGVQNASCEFDVATLMPTYRLIIGIPG 487
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
SNA I+K +G II+RA+ ++ + + + L L R+++E A
Sbjct: 488 KSNAFAISKKLGLSDDIIERAKTNIDSNKVDFET-----LLSDLENSRKEIERDKAEIAR 542
Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
E L + + +L + A + A ++ L AK D+ ++ + +
Sbjct: 543 FKEEARQLQERAKAKDDELSAKKAQILADAREEAADILEEAKEMADSAIKKYNKWTTNPH 602
Query: 631 ADEINSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 688
+ +++ E + + + + P+ S++ +T+ + G+ VHV S+ D TV
Sbjct: 603 KADASTMENERKKLRTKMDDYRKMTPEKRKSMTSHHTAK-DFKAGDTVHVISM-DTTGTV 660
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+ VQ G + + PA L + +Q+ + S N
Sbjct: 661 TAPADSKGNIKVQMGILSSLL------------------PASDLVIIETPKQNNAQVSIN 702
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
+ G + + +++ GM V EA+ +D L A + +IHG GTG +++ +
Sbjct: 703 NKRGMGKALNI-QPEINVLGMTVAEATSLVDRYLDDAMMAHLHKVRIIHGKGTGALRKGI 761
Query: 807 LEILRNHPRVAKY 819
+ LR V +
Sbjct: 762 HDYLRKQSYVKSF 774
>gi|222529627|ref|YP_002573509.1| MutS2 family protein [Caldicellulosiruptor bescii DSM 6725]
gi|254766186|sp|B9MK78.1|MUTS2_ANATD RecName: Full=MutS2 protein
gi|222456474|gb|ACM60736.1| MutS2 family protein [Caldicellulosiruptor bescii DSM 6725]
Length = 787
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 236/800 (29%), Positives = 390/800 (48%), Gaps = 123/800 (15%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
E+I L + G L+P EI + + L+ + L+ Q +S L +
Sbjct: 68 FENILPSLKKSKLGATLNPHEILQIGKVLKLSYEMRTYLSFT--------QDFSFLESMK 119
Query: 104 KNCNFLTELEEKIGFCIDCKLLI---ILDRASEDLELIRAERKRNMEN-----LDSLLKK 155
K L L+E I ID L ILD AS L+ IR ++ R +EN L+S+++
Sbjct: 120 KR---LVNLKEVIS-RIDQTFLTPDEILDTASSKLKEIR-DKIRKLENKIRDELNSMIRD 174
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
Q F + +P+IT R ++ + +KA + + GI + S++GAT F+EP VE
Sbjct: 175 PKIQRF----LQEPIITIRGEKLLLPVKAEFRNEVK-GIVHDQSATGATLFVEPFVCVEI 229
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
+N L N E E IL +++ IA I+ ++E+D+ F +A +A+ M+
Sbjct: 230 SNQIKILKNQEKEEIERILQEISSLIASYCEVIETSFYALVELDIVFTKAIWAKEMNASK 289
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI+++ IN++ +HPL+
Sbjct: 290 PIINASG------IINLKKARHPLIQ---------------------------------- 309
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
D VPIDI + + V++ITGPNTGGKT ++KT+GL L+ ++G+++PA L F
Sbjct: 310 -KDKVVPIDIHLGKDFDVLIITGPNTGGKTVTLKTVGLFCLLCQSGIFIPADEGSELCIF 368
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+ Q+LSTFS H+ I++I + ++LVL+DEIG+GTDP EG ALA +
Sbjct: 369 QKIFADIGDDQSIVQSLSTFSAHMKNIIEITKNADDKTLVLLDEIGAGTDPEEGAALAKA 428
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL+YL ++ + TTHY +L ++ RFENA+ EF ++TL+PTYR+L G G SNAL
Sbjct: 429 ILKYLSEKGSKVIATTHYGELKIFAQQEDRFENASCEFDVKTLKPTYRLLIGIPGRSNAL 488
Query: 516 NIAKSIGFDRKIIQRA-----QKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTA 568
I+ ++G D+ I++ A QK + +R+ E +Q RK + ++ K E+QA A
Sbjct: 489 VISSNLGLDKGIVEMARGYLSQKTIDLDRIINEMEQKRKEAEENLELAQKLKHEAQALKA 548
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF----EN 624
A E+E K + ++ K + ++ + ++ +I+ + +D EN
Sbjct: 549 A------------YEEEKKRFETERERIRKKAINEAKEIVESSQYEIENLFKDLRKLAEN 596
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
E+ +E E I +I + + + + S+T + + G++V+V+S D
Sbjct: 597 LKEKEVLKELEEKKREYERLIQSISQQVKQEAE---SKTKKTIQNLRLGQKVYVRSF-DA 652
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
V +P + VQ G M++ V ++I + + +D +
Sbjct: 653 EGFVESLPDSKGNLTVQIGIMKINVNLSDIEEV-----------------EGQDSKIYQI 695
Query: 745 GSSNEEASYGPRVQTSKN---SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 799
S N + KN S+D+RG ++A ++D L A + +IHG GT
Sbjct: 696 ASRN-------VIIKEKNIDMSIDVRGKTSDDAILEVDKYLDDAYTAGLKQVTIIHGKGT 748
Query: 800 GVVKERVLEILRNHPRVAKY 819
GV+++ + LR HP V +
Sbjct: 749 GVLRQAIRNFLRRHPHVKSF 768
>gi|126652668|ref|ZP_01724829.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. B14905]
gi|126590517|gb|EAZ84635.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. B14905]
Length = 788
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 246/835 (29%), Positives = 394/835 (47%), Gaps = 113/835 (13%)
Query: 22 KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+LL + L++++ + + + I D+ A G +L+ E+ + T+RA + + +
Sbjct: 46 QLLEEMDEGLSILRVKGNVPMGGIFDVRPSARRAQIGGMLAAIELMEISSTIRA-SRILR 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
E +L+ D + + + LT L+ +I CID +LD AS L IR
Sbjct: 105 NFIE--DLEADEVIEIPHFIAKKETMPVLTGLQHEINNCIDDNG-AVLDSASTTLRTIRQ 161
Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+E + L+SL++ A + L+T R R + +K +++ GI
Sbjct: 162 SLRSEEAKVRSKLESLIRGSNASKM----LSDTLVTIRNDRFVIPVKQEYRHHY-GGIVH 216
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSG T F+EP V+ NN RL E AE IL L+A + ++ L+ +
Sbjct: 217 DQSSSGQTLFIEPDSIVQANNEIHRLKMKEQAEVERILLALSAMVQDVAPDLFNLVKVLG 276
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+ID+ A+ + Q P ++ D I + +HPLL
Sbjct: 277 DIDVILAKGKYGQANKCTMPKMNQ------DGYIRLVRARHPLL---------------- 314
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P+ D VP DI+ + +VITGPNTGGKT ++KT+GL +L
Sbjct: 315 PI-------------------DTAVPNDIEFGKDITAIVITGPNTGGKTVTLKTVGLCTL 355
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL +PA + +L F + ADIGD QS+EQ+LSTFS H+ IVDIL+ ESLVL
Sbjct: 356 MAQAGLPVPALDGSQLAVFKQLFADIGDEQSIEQSLSTFSSHMVNIVDILQKFDDESLVL 415
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA SIL + R + TTHY +L NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVANASVEFDIE 475
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TL PTYR+L G G SNA I+ +G II+RA+ R H + SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISSRLGLPETIIERAKGFTGTDR-----HEVESMIASLEE 530
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
RR+ E A + +L E L +E++D+ + D R L K ++ ++ + AK + +
Sbjct: 531 TRRQSEDDAERSHALLLESESLRKELQDKLQAYDERKEALDKKAKEKARKIVEEAKHEAE 590
Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR------PDDDFSV----SETNTS 666
++ + ++A + ++KE E ++EA + P D+ V ++
Sbjct: 591 GIIAELREMRKNA-----DQVVKEHE-----LIEARKRLEEATPLDNNKVLKKAAQVKAR 640
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
+ G++V V S G + T++E + + V VQ G +++++ +++ I K
Sbjct: 641 AQNLVVGDEVKVLSYGQR-GTLLEKVSNTEWV-VQMGILKMKISDSDLEYIKPEKE---- 694
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIAL 782
P +R +AG N K LDLRG R E+A +D AL
Sbjct: 695 ---PIVR---------TAGVKNRNGHV-------KLELDLRGERYEDAILRTEKYIDDAL 735
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
R + +IHG+GTG +++ + L+N+ RV ++ + G TV +K
Sbjct: 736 LANYGR--VSIIHGVGTGALRQGIQSYLKNNKRVKSFRFGEAGEGGLGVTVVELK 788
>gi|315917841|ref|ZP_07914081.1| DNA mismatch repair protein mutS [Fusobacterium gonidiaformans ATCC
25563]
gi|313691716|gb|EFS28551.1| DNA mismatch repair protein mutS [Fusobacterium gonidiaformans ATCC
25563]
Length = 778
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 234/814 (28%), Positives = 392/814 (48%), Gaps = 115/814 (14%)
Query: 39 LDLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
LD+ ++DI + + G L E+ + LR +L + L +Y
Sbjct: 63 LDVRHLKDICALTEKIKLIGTYLEVDELWDININLRFFRIFQTQL--------EDLGKYK 114
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
L + +K + L +E+ I ID + I D AS DL IR +K +N+ ++
Sbjct: 115 ALRDYMKQVSPLRLIEDLISKAIDAEKQI-KDDASLDLRDIRIHKKVLAQNIRRKFDELF 173
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ + + +IT+R RM V +K K L+ GI + SSSG T F+EP V NN
Sbjct: 174 EEPSVSAAFQERIITERDGRMVVPVKLDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNN 232
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E E IL L+ +I + EI + + +L ID A+A F
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEIYKIGNMILYIDRLQAKANFG--------- 283
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
L HV P++ G + L A P K V
Sbjct: 284 LEEACHV-------------PMVQGKEILYLEKARHPFIP-KEKV--------------- 314
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VP+ ++ + ++++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + R+ +F
Sbjct: 315 ---VPLTFEIGKDYKILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASQNSRIGFFQG 371
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
+ ADIGD QS+EQ+LS+FS H++ + DILE V R LVL+DE+GSGTDP+EG A A SI+
Sbjct: 372 VFADIGDEQSIEQSLSSFSAHVTNLQDILEQVHRNCLVLLDELGSGTDPTEGSAFAMSII 431
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
YL+++ +++TTHY+++ + E A+ EF TL PTYR+L G G+SNAL I
Sbjct: 432 DYLKEKKCNSIITTHYSEVKAHGYNEEGIETASMEFDTTTLSPTYRLLMGIPGESNALTI 491
Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY----QSLMEERRKLESQA---RTAAS 570
AK +G ++II++AQ + + ++K EL ++ E K++++ R AA
Sbjct: 492 AKRLGIPQEIIEKAQSYIS------EDNKKIELMINNIKNKSESLDKMQTELTGLREAAK 545
Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
++ E + E+E K L+R + K + ++ +N + + +++ + + + S
Sbjct: 546 MNQE------KWEEERKALEREKNEILKKAYEDSEKMMNEMRAKASALIEKIQKE--EHS 597
Query: 631 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATV 688
++ K+ + + + A + + + +++ T F G++V VK++ ++ ATV
Sbjct: 598 KEQA----KQIQKNLNMLSSALKEEKNKTITLNKTMKKKAHFKEGDRVFVKNI-NQFATV 652
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+++ ++ VQ G +++ V P +R +E +
Sbjct: 653 LKINAMKESAQVQAGILKLEV------------------PFEEIRVTEEKK--------- 685
Query: 749 EEASYGPRVQTS---KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
E +Y +V ++ +DLRG VEE H+L+ L A ++VIHG GTG ++
Sbjct: 686 -EKTYQVQVHKKIAVRSEIDLRGKMVEEGIHELETYLDRALLNGYHEIYVIHGKGTGALR 744
Query: 804 ERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+LE L+ P V Y GCTV +K
Sbjct: 745 NGILEYLKTCPYVKDYRIGGHGEGGLGCTVVTLK 778
>gi|317059473|ref|ZP_07923958.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_5R]
gi|313685149|gb|EFS21984.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_5R]
Length = 778
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 234/814 (28%), Positives = 392/814 (48%), Gaps = 115/814 (14%)
Query: 39 LDLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
LD+ ++DI + + G L E+ + LR +L + L +Y
Sbjct: 63 LDVRHLKDICALTEKIKLIGTYLEVDELWDININLRFFRIFQTQL--------EDLGKYK 114
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
L + +K + L +E+ I ID + I D AS DL IR +K +N+ ++
Sbjct: 115 ALRDYMKQVSPLRLIEDLISKAIDAEKQI-KDDASLDLRDIRIHKKVLAQNIRRKFDELF 173
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ + + +IT+R RM V +K K L+ GI + SSSG T F+EP V NN
Sbjct: 174 EEPSVSAAFQERIITERDGRMVVPVKLDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNN 232
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E E IL L+ +I + EI + + +L ID A+A F
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEIYKIGNMILYIDRLQAKANFG--------- 283
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
L HV P++ G + L A P K V
Sbjct: 284 LEEACHV-------------PMVQGKEILYLEKARHPFIP-KEKV--------------- 314
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VP+ ++ + ++++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + R+ +F
Sbjct: 315 ---VPLTFEIGKDYKILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASQNSRIGFFQG 371
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
+ ADIGD QS+EQ+LS+FS H++ + DILE V R LVL+DE+GSGTDP+EG A A SI+
Sbjct: 372 VFADIGDEQSIEQSLSSFSAHVTNLQDILEQVHRNCLVLLDELGSGTDPTEGSAFAMSII 431
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
YL+++ +++TTHY+++ + E A+ EF TL PTYR+L G G+SNAL I
Sbjct: 432 DYLKEKKCNSIITTHYSEVKAHGYNEEGIETASMEFDTTTLSPTYRLLMGIPGESNALTI 491
Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY----QSLMEERRKLESQA---RTAAS 570
AK +G ++II++AQ + + ++K EL ++ E K++++ R AA
Sbjct: 492 AKRLGIPQEIIEKAQSYIS------EDNKKIELMINNIKNKSESLDKMQAELTGLREAAK 545
Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
++ E + E+E K L+R + K + ++ +N + + +++ + + + S
Sbjct: 546 MNQE------KWEEERKALEREKNEILKKAYEDSEKMMNEMRAKASALIEKIQKE--EHS 597
Query: 631 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATV 688
++ K+ + + + A + + + +++ T F G++V VK++ ++ ATV
Sbjct: 598 KEQA----KQIQKNLNMLSSALKEEKNKTITLNKTMKKKAHFKEGDRVFVKNI-NQFATV 652
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+++ ++ VQ G +++ V P +R +E +
Sbjct: 653 LKINAMKESAQVQAGILKLEV------------------PFEEIRVTEEKK--------- 685
Query: 749 EEASYGPRVQTS---KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
E +Y +V ++ +DLRG VEE H+L+ L A ++VIHG GTG ++
Sbjct: 686 -EKTYQVQVHKKIAVRSEIDLRGKMVEEGIHELETYLDRALLNGYHEIYVIHGKGTGALR 744
Query: 804 ERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+LE L+ P V Y GCTV +K
Sbjct: 745 NGILEYLKTCPYVKDYRIGGHGEGGLGCTVVTLK 778
>gi|422701663|ref|ZP_16759503.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1342]
gi|315170093|gb|EFU14110.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1342]
Length = 788
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 252/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLNPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|229550105|ref|ZP_04438830.1| MutS family DNA mismatch repair protein [Enterococcus faecalis ATCC
29200]
gi|255972883|ref|ZP_05423469.1| DNA mismatch repair protein mutS [Enterococcus faecalis T1]
gi|257422707|ref|ZP_05599697.1| MutS2 family protein [Enterococcus faecalis X98]
gi|312952408|ref|ZP_07771283.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0102]
gi|384518505|ref|YP_005705810.1| mutS2 protein [Enterococcus faecalis 62]
gi|422693114|ref|ZP_16751129.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0031]
gi|422706763|ref|ZP_16764461.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0043]
gi|422726956|ref|ZP_16783399.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0312]
gi|229304809|gb|EEN70805.1| MutS family DNA mismatch repair protein [Enterococcus faecalis ATCC
29200]
gi|255963901|gb|EET96377.1| DNA mismatch repair protein mutS [Enterococcus faecalis T1]
gi|257164531|gb|EEU94491.1| MutS2 family protein [Enterococcus faecalis X98]
gi|310629792|gb|EFQ13075.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0102]
gi|315152573|gb|EFT96589.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0031]
gi|315155852|gb|EFT99868.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0043]
gi|315157981|gb|EFU01998.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0312]
gi|323480638|gb|ADX80077.1| mutS2 protein [Enterococcus faecalis 62]
Length = 788
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 252/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKGNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|408356333|ref|YP_006844864.1| MutS2 protein [Amphibacillus xylanus NBRC 15112]
gi|407727104|dbj|BAM47102.1| MutS2 protein [Amphibacillus xylanus NBRC 15112]
Length = 783
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 230/745 (30%), Positives = 364/745 (48%), Gaps = 98/745 (13%)
Query: 98 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSL 152
P++ EL+ L LE +I CID + LD AS L IR + + N + LDSL
Sbjct: 117 PIIRELVGQIELLNHLEREIKSCIDDNGHV-LDGASSKLRQIRMKIRTNESRIRDRLDSL 175
Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
K + + A ++T R R + +K ++ GI + SSSG T F+EP+
Sbjct: 176 TKSKSKMLSDA------IVTIRNDRYVLPVKQEYRGAF-GGIVHDQSSSGQTLFIEPQVV 228
Query: 213 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
VE NN E AE IL L+ EI + + + + ++D FARA + M
Sbjct: 229 VEINNQLSEARAQEKAEIERILRQLSQEIGTHHPYLTHNVKILTQLDFIFARAKLGRSMK 288
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
P ++ Q I+I+ +HPLL N + V +
Sbjct: 289 AAMPKMNDQG------IIDIKQARHPLL-----------------------NEDEVVAN- 318
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
DI + + +VITGPNTGGKT ++K +GLA+LM+++GL +PA + RL
Sbjct: 319 -----------DILLGEDYHAIVITGPNTGGKTVTLKLVGLATLMAQSGLQVPALDGCRL 367
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
FD + ADIGD QS+EQ+LSTFS H+++IV IL+ V+ +SLVL DE+G+GTDP EG AL
Sbjct: 368 AVFDEVFADIGDEQSIEQSLSTFSSHMTQIVKILKQVNHKSLVLFDELGAGTDPQEGAAL 427
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A +IL Y+ ++ + TTHY +L NA+ EF +++L+PTYR+L G G S
Sbjct: 428 AMAILDYVVNKKARVIATTHYPELKAYGYNRDGVINASVEFDVKSLQPTYRLLIGVPGRS 487
Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 572
NA I++ +G D +II+ ++L+ + +H + +SL RR+ E A
Sbjct: 488 NAFEISRRLGLDDQIIEAGKQLI-GTDTKSVEH----MIESLDTARRQAEQDYDDAERTL 542
Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
E L ++ E + D+ L K + Q+ + A+ + +V+ AS
Sbjct: 543 QEAEALRDQLRKELEKFDQERERLYQKAEETAQKAIEKARQEATEIVESIRQMQHGASLK 602
Query: 633 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
E + AA + ++ ++ + +F + G++V+V +L ++ T++ +
Sbjct: 603 EHEWIEARKRLDQAAPNLTDKRQENKALHTSAKQTF--EVGDEVNVLTL-NQNGTIIAIN 659
Query: 693 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN--AANPAPRLRKQQEDRQSGSAGSSNEE 750
DDD + VQ G M+++VKK ++R I KR+N A P ++ GS
Sbjct: 660 ADDD-IQVQIGVMKLKVKKRDLRLI---KRENPIVAKPLATVK-----------GSHYH- 703
Query: 751 ASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKER 805
K LDLRG R E+A +L D LA ++ + +IHG GTG +++
Sbjct: 704 ---------VKPELDLRGERYEDALAELENYIDDAILAGYQK---VTIIHGKGTGALRKG 751
Query: 806 VLEILRNHPRVAKYEQESPMNYGCT 830
V ++HP + K + MN G +
Sbjct: 752 VQSFAQSHPNI-KSSRVGGMNEGGS 775
>gi|304436503|ref|ZP_07396477.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304370549|gb|EFM24200.1| DNA mismatch repair protein MutS [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 785
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 259/805 (32%), Positives = 390/805 (48%), Gaps = 121/805 (15%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT---LRAVNNV 78
+L +T A+ + Q QP I + IL A G LL E+ V+ T +R V
Sbjct: 45 RLQRETEEAVRVAQIQPPPFDGIHHLQEILKRAGRGILLELDELRLVKSTIGGMRDVKCF 104
Query: 79 WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
++ L+ AEL D L R +L +L+ N ++E F D +L R + +L
Sbjct: 105 FRDLSADAELLKD-LARRIEILGMLER-NLKAAIDEYGNFRDDAS--PVLRRITNEL--- 157
Query: 139 RAERKRNMENLDSLLKKVAAQ-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
R + R E L S+L A Q +FQ + ++T R R + +K ++ P G+ +
Sbjct: 158 RTAQSRVKERLSSILHDAAYQKMFQ-----EAIVTVRDERYVIPVKQEYRSQFP-GVIHD 211
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S+SGAT F+EP VE NN ++ + E I+ LT EIA+S + + +
Sbjct: 212 QSASGATLFIEPLAIVELNNTVRQMGIAREQEILRIMQRLTGEIARSADVLSANCTILSD 271
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+DL FARA A+ M PIL+ D +++ +HPLL P
Sbjct: 272 LDLIFARASLAREMSAYPPILNR------DGYVHLRRARHPLL----------------P 309
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
D VPIDI++ ++ITGPNTGGKT SMKTLG+ +LM
Sbjct: 310 -------------------PDKVVPIDIELGKTFSTLLITGPNTGGKTVSMKTLGILALM 350
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
S++G +LPA++ +P + I ADIGD QS+EQ+LSTFS H IV I++ + LVL+
Sbjct: 351 SQSGCFLPAESGSEIPIYQNIYADIGDEQSIEQSLSTFSAHTRNIVRIIDRATFGDLVLL 410
Query: 438 DEIGSGTDPSEGVALATSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA SI++ +L +R+ V TTHYADL ENA+ EF L+
Sbjct: 411 DEVGAGTDPDEGAALARSIIEHFLMNRIA-TVATTHYADLKTYAYTQQGVENASVEFDLK 469
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
TLRPTYR+L G G SNA +I++ +G +I+ RA++ V + + E H E +++
Sbjct: 470 TLRPTYRLLIGIPGASNAFSISRQLGLPEEIVARAEEYVSEDHAQFETVVH-DLERAKTI 528
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
EE+ +L LY++ D + R A A E Q Q+ L+ A+ +
Sbjct: 529 YEEKNQL----------------LYKKETDVGRAESRLRAERAAFE-QSKQELLHKAREE 571
Query: 615 IDTVVQDFENQLRDASADEINSL--------IKESESAIAAIVEAHRPDDDFSVSETNTS 666
+ +V+ + R ++ + I SL IKE + AI A ++S +
Sbjct: 572 ANNIVR----EARRSAEETIQSLKEQFDDHGIKERQKAIQAARSRLNEAYVHNISPKIPA 627
Query: 667 SFTP------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
P Q G+ V++++L + TV+ V G + + VQ G +R VK + + +
Sbjct: 628 EGRPVRPGEIQSGDTVYIRTLAQE-GTVLSVQGKE--LSVQVGGLRTMVKMDACTFVGHP 684
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD- 779
KRK N G S + S R Q +D+RGM V EA L+
Sbjct: 685 KRKKKIN-------------KIRIGGSLAQKSAEVRPQ-----IDVRGMTVLEAEAVLEK 726
Query: 780 -IALACWESRSVLFVIHGMGTGVVK 803
I A + S + VIHG GTG ++
Sbjct: 727 FIDDAVFAGLSTVLVIHGKGTGALR 751
>gi|256958895|ref|ZP_05563066.1| MutS 2 protein [Enterococcus faecalis DS5]
gi|257078926|ref|ZP_05573287.1| MutS 2 protein [Enterococcus faecalis JH1]
gi|294780084|ref|ZP_06745460.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis PC1.1]
gi|307271106|ref|ZP_07552389.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4248]
gi|397699794|ref|YP_006537582.1| mutS2 protein [Enterococcus faecalis D32]
gi|422708383|ref|ZP_16765911.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0027]
gi|422718757|ref|ZP_16775408.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0017]
gi|256949391|gb|EEU66023.1| MutS 2 protein [Enterococcus faecalis DS5]
gi|256986956|gb|EEU74258.1| MutS 2 protein [Enterococcus faecalis JH1]
gi|294452836|gb|EFG21262.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis PC1.1]
gi|306512604|gb|EFM81253.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4248]
gi|315033806|gb|EFT45738.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0017]
gi|315036891|gb|EFT48823.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0027]
gi|397336433|gb|AFO44105.1| mutS2 protein [Enterococcus faecalis D32]
Length = 788
Score = 279 bits (713), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 252/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNVF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKGNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|312135400|ref|YP_004002738.1| muts2 family protein [Caldicellulosiruptor owensensis OL]
gi|311775451|gb|ADQ04938.1| MutS2 family protein [Caldicellulosiruptor owensensis OL]
Length = 786
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 237/788 (30%), Positives = 393/788 (49%), Gaps = 104/788 (13%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA-AELDGDSLQRYSPLLELLK 104
DI+ IL A + +L+P EI V R L+ V L A S +R L EL
Sbjct: 70 DISLILKKAKAQAILTPHEILEVARILKLSQEVKSYLANAVGSCLKSSRERLFNLKELTA 129
Query: 105 NCN--FLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVA 157
+ FLT E ILD AS L+ IR +R R +E L+ +++
Sbjct: 130 RIDQTFLTPEE-------------ILDTASPRLKEIR-DRIRRLETRIRDELNRMIRDPK 175
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
Q F + +P+IT R ++ + +KA HK + GI + S++GAT F+EP VE +N
Sbjct: 176 IQRF----LQEPIITVRGDKLLLPVKAEHKDSIK-GIIHDQSATGATLFVEPFVCVEISN 230
Query: 218 MEVRLSNSEIAEETAI-LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
++R++ SE EE L L+ I+ S EIK + + E+D+ F +A +A P
Sbjct: 231 -QIRVARSEEKEEIEKILQELSQLISDSYNEIKQNFESLSELDILFTKAQWAHQFRASKP 289
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
IL++ + IN++ +HPL +E ++
Sbjct: 290 ILNTAGY------INLKKARHPL----------------------IEKEKV--------- 312
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VPID+ + E V+VITGPNTGGKT ++KT+GL L++++G++LPA + F
Sbjct: 313 ----VPIDVHLGKEFDVLVITGPNTGGKTVTLKTIGLFCLLAQSGMFLPADEGSEVCVFS 368
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+ Q+LSTFS H+ I++I + +LVL+DEIGSGTDP EG ALA +I
Sbjct: 369 KIFADIGDEQSIIQSLSTFSAHMKNIIEITQNADNSTLVLLDEIGSGTDPEEGAALAKAI 428
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L++L ++ V TTHY +L ++ RFENA+ EF + TL+PTYR+L G G SNAL
Sbjct: 429 LKFLHNKGAKVVATTHYGELKTFAQQEERFENASCEFDINTLKPTYRLLIGIPGMSNALY 488
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+ ++G +++I++ A+ + + E +++ + +R++LE +A L E
Sbjct: 489 ISSNLGLNKEIVELAKSYMSKKMLEL-----TDIINEMERKRKELEEVLESANKLKIETE 543
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
+L + +E+E + + +K + +++ ++ F + D V + F+ + A + +
Sbjct: 544 NLKKTLEEERRRFEAEKQRIKERASKEARE---FVQRVEDEVEKLFKELRKIAESLKEKE 600
Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPG 693
++K+ E + + S E S P+ G++V+VKS D V +P
Sbjct: 601 MLKQLEEKKREYENLVKSIEQASQKEEKLQSKLPENLRLGQKVYVKSF-DAEGFVESLPD 659
Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 753
+ V+ G M++ V ++I I +E+ + + SS +
Sbjct: 660 SKGNLTVRIGIMKLSVNISDIFEI------------------EEETTTKNLVSSKKAVEI 701
Query: 754 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 811
+ ++ S+D+RG ++A ++D L A + +IHG GTGV+++ + LR
Sbjct: 702 --KQKSIDMSIDVRGKTSDDAILEVDKYLDDAYTAGLKQVTIIHGKGTGVLRQAIRNFLR 759
Query: 812 NHPRVAKY 819
HP V +
Sbjct: 760 RHPHVKSF 767
>gi|238917772|ref|YP_002931289.1| DNA mismatch repair protein MutS2 [Eubacterium eligens ATCC 27750]
gi|259511156|sp|C4Z417.1|MUTS2_EUBE2 RecName: Full=MutS2 protein
gi|238873132|gb|ACR72842.1| DNA mismatch repair protein MutS2 [Eubacterium eligens ATCC 27750]
Length = 787
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 242/808 (29%), Positives = 382/808 (47%), Gaps = 97/808 (12%)
Query: 24 LNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LN+T+ AL+ + Q +D S +DI + G L+ SE+ + A+ + K +
Sbjct: 47 LNETNDALSRIFQKGTVDFSQTKDIRASVARLKVGSSLNISELL----NISAILSCAKHV 102
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
+ E DS+ +L+N + L +I CI + I D AS +L IR +
Sbjct: 103 KDYYEHREDSISG------MLENLATVDALNSQIKKCIISEDEI-SDDASSNLRSIRRSK 155
Query: 143 KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
+ + S L K+ + +IT R+ R C+ +KA +K P G+ + SS+G
Sbjct: 156 SIANDRIHSELNKLLNSPTYRTYLQDYVITTRQGRYCLPVKAEYKSAFP-GMIHDQSSTG 214
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
+T F+EP V+ NN L E AE IL+ L+A+ + E+ + ++E+D F
Sbjct: 215 STLFIEPAAVVKLNNDIRELELKEAAEIEVILADLSAKAGEHTEELLCDYEILVELDCIF 274
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
A+A A+ M P++++ INI+ +HPL+ ++
Sbjct: 275 AKAQLARHMHASRPVMNTSG------IINIKKGRHPLIESHTV----------------- 311
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
VPIDI + + ++++ITGPNTGGKT S+KT+GL +LM+++GL
Sbjct: 312 ------------------VPIDIYLGTDFKLLIITGPNTGGKTVSLKTVGLLTLMAQSGL 353
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++PA +H + F I ADIGD QS+EQ+LSTFS H++ V IL+ LVL DEIG+
Sbjct: 354 FIPALDHSDIAVFKNIYADIGDEQSIEQSLSTFSSHMTNTVKILKEADENCLVLFDEIGA 413
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GTDP+EG ALA +IL L+ R + TTHY+++ ENA+ EF +E+LRPTY
Sbjct: 414 GTDPTEGAALAIAILNDLKMRGVTTMATTHYSEIKLYALSTEGVENASCEFDVESLRPTY 473
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 562
R+L G G SNA I+K +G I+ A ERL E ++ L R LE
Sbjct: 474 RLLIGIPGKSNAFAISKKLGLPDYILSDAS---ERLNAEDVHFE--DIVSDLEHARISLE 528
Query: 563 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
+ S AEI L +++ + + LD R ++ K +Q L AK D ++
Sbjct: 529 KEQAEVESYKAEIASLKEKLQAKNERLDERTDNIIRKANEQAAAILKDAKDFADETIKAM 588
Query: 623 ENQ-LRDASADEINSLIKESES-------AIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
+ A ++ + ++E + A V+AH+ D +SE F
Sbjct: 589 NKHGMTVAELEKHRTAVREKMNKNQAKLKVEPAKVKAHKAHD---ISE---------FKT 636
Query: 675 QVHVKSLGDKLA-TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLR 733
+HVK L ++ TV + V VQ G + ++ N+ + + K A P+
Sbjct: 637 GMHVKVLTMNVSGTVSAIHPAKKQVTVQVGALSTKIDIKNLEILSDYKEPKEA-PSKAAG 695
Query: 734 KQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVL 791
+ + S SAG S E ++L G V+EA +LD L A +
Sbjct: 696 GSGKIKMSKSAGISTE--------------INLLGCTVDEAVARLDKYLDDAYIARIPQV 741
Query: 792 FVIHGMGTGVVKERVLEILRNHPRVAKY 819
++HG GTG ++ V LR P + +
Sbjct: 742 RIVHGKGTGALRNGVTAYLRGVPYIKSF 769
>gi|365845197|ref|ZP_09385983.1| MutS2 family protein [Flavonifractor plautii ATCC 29863]
gi|364561374|gb|EHM39279.1| MutS2 family protein [Flavonifractor plautii ATCC 29863]
Length = 789
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 244/824 (29%), Positives = 400/824 (48%), Gaps = 103/824 (12%)
Query: 18 EESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
++ Q+ L++TSAA+ M ++ P S ++ +A L A G L+ E+ + LRA
Sbjct: 44 DDVQRALDETSAAVDMSALRGSP-SFSGVKPVAASLQRAHMGGALNTRELLDIAAVLRAA 102
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ + G+ +R ++ L ++ LE+KI I + I D AS +
Sbjct: 103 RSAREY--------GEGDERKKTCIDHLFRSLTANRFLEDKITGSIVGEDEIA-DAASPE 153
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR + + +L K+ + QA + + +IT+R R V +K+ HK +P G+
Sbjct: 154 LASIRRHIRATASKVRDILNKLLSS-NQAKYLQEAIITQRNDRFVVPVKSEHKNDVP-GL 211
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+VSSSGAT+F+EP G V+ NN L E E IL+ L+AE A+ + +I D
Sbjct: 212 VHDVSSSGATFFIEPMGVVKANNELKELQAREEKEIERILAELSAECAQFKDDITQDYDL 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
++ +D+ FARA A M P + + + + +HPLL
Sbjct: 272 LILLDVIFARAKLAYRMRACAPRI-------VERGLYLRKARHPLL-------------- 310
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
+P D V D+ + + +VITGPNTGGKT ++KT+GL
Sbjct: 311 -DP--------------------DRAVANDLMLGEDFDTLVITGPNTGGKTVTIKTIGLL 349
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM++ GL++P + R+ F +LAD+GD QS+ Q+LSTFS H+ IV IL E+L
Sbjct: 350 TLMAQCGLHIPVSDDSRVKVFRRVLADVGDEQSIAQSLSTFSSHMVNIVGILGEADGETL 409
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L DE+G+GTDP EG ALA +I++ R+ L TTHYA+L ENA+ EF+
Sbjct: 410 ILFDELGAGTDPIEGAALAAAIIESAREMGALVAATTHYAELKVYAMTTPGVENASCEFN 469
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
+++L PTYR+L G G SNA I++ +G + IIQ+A R + + R ++ L
Sbjct: 470 VDSLAPTYRLLIGIPGKSNAFAISERLGLPKSIIQKAAA-----RIDAENVRFEDVLTQL 524
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL---KAKETQQVQQE---- 607
E+R+++E + AA L RE+E+ AK A + +AK ++ Q E
Sbjct: 525 DEQRQEMEREKEAAARLR-------REMEETAKASREYKAKMEAERAKAVEKAQAEARAI 577
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSETNTS 666
L+ A+ D V ++ + R +E + + +A+ ++ EA
Sbjct: 578 LDEARDTADQVFKELNDMRRRQRKEEDWQRVNDERAALRRSLNEAEGKLGARPEEPAPPP 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
+ + G+ V + +G + ATV+ V D ++ +Q G +++ ++ +R + +++A
Sbjct: 638 TRPARAGDTVELVKMGTQ-ATVLSV-NKDGSLQLQAGILKITARQEEVRVVEGETQQSAK 695
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
R + + S G+S E +DLRGM +EA LD+ L A
Sbjct: 696 KVVAR-----AEHKLRSLGASPE--------------VDLRGMMTDEAIGALDLFLDNAV 736
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+ + +IHG GTG V++ V E L+ V + P YG
Sbjct: 737 LGKLNEVRIIHGKGTGAVRKAVREHLKRSRYVKSFR---PGRYG 777
>gi|347727052|gb|AEP19884.1| recombination inhibitory protein [Exiguobacterium sp. 11-28]
Length = 784
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 245/804 (30%), Positives = 380/804 (47%), Gaps = 128/804 (15%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQR 95
L L + D+ + A G +LS SE+ AV + R V N ++KL E D + L R
Sbjct: 62 LPLGGLTDVRSEVKRAAIGSVLSTSELLAVAAVMYSGRQVKNFFEKLHE----DNEDL-R 116
Query: 96 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LD 150
L E + L E+E+ I ID + + D AS+ L +R + R+ E +D
Sbjct: 117 IPRLDEYAERLTKLIEVEQSIRHAIDDQG-TVQDSASDRLRGLRTQL-RSFEGSVRSRID 174
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
++L+ A + A ++T R R V +K ++ GI + S+SG T F+EP+
Sbjct: 175 NILRNNAKMLSDA------IVTIRNDRYVVPVKMEYRQAFG-GIVHDQSASGQTLFIEPQ 227
Query: 211 GAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
V NN EVRL E AE ILS L+ + + +D + +D FA+ +
Sbjct: 228 AIVSINNEIQEVRLK--ERAEIDRILSELSNLVGGVADSVVINLDVLATLDFVFAKVAYG 285
Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
+ P L+ + + + +HP + P
Sbjct: 286 HQLKATEPKLNDEREIKLKQA------RHPFI----------------P----------- 312
Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
D VPI +++ +VITGPNTGGKT ++KTLGL LM ++GLY+PA+
Sbjct: 313 --------QDEVVPITVELGEAFTSLVITGPNTGGKTVTLKTLGLLQLMVQSGLYVPAEF 364
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
L FD I ADIGD QS+EQ+LSTFS H++ IV +L+ + SLVL DE+G+GTDP E
Sbjct: 365 GTELSVFDAIYADIGDEQSIEQSLSTFSSHMTNIVSMLDKIDFMSLVLFDELGAGTDPQE 424
Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
G ALA +IL ++ R TTHY++L NA+ EF +E+L PTYR+L G
Sbjct: 425 GAALAIAILDEVKRRGARVAATTHYSELKAYAYNREGVMNASMEFDIESLSPTYRLLIGV 484
Query: 509 TGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEE 557
G SNA I++ +G ++I +A + ++ L E +HR +L + L+ +
Sbjct: 485 PGRSNAFEISRRLGLSEQVIDKARSHVGTDAESVESMINEL--EAAKHRAEQLEKELIVK 542
Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
R LE++ A+ A++ D RE D +A+ + V+Q AK Q +
Sbjct: 543 RHDLEAE---QAAFEAKLTDFERE-------RDTMYGEAEARAEKAVEQ----AKRQANE 588
Query: 618 VVQDFENQLRD---ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
V+ D +LR+ EI + K+ ESA + + + T S GE
Sbjct: 589 VI-DRLKKLREEGIVKEHEIIAAKKQLESAKPTLQDKKIQKVKQKAQQKRTFS----KGE 643
Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 734
+V V + K V ++ +D+ VQ G M+V VK ++++ I SK ++ + L++
Sbjct: 644 EVKVTTFNQKGYIVKQL--NDNEYNVQVGIMKVNVKADDLQKIGPSKEQSLQSKGSSLKR 701
Query: 735 QQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLF 792
Q ++K+ LDLRG+RVEE +LD I A +
Sbjct: 702 Q----------------------SSTKSELDLRGVRVEEGLSRLDKYIDEALVSGYDNVR 739
Query: 793 VIHGMGTGVVKERVLEILRNHPRV 816
+IHG+GTG +++ E L+ H V
Sbjct: 740 IIHGLGTGAMRQATQEYLKGHRHV 763
>gi|188586428|ref|YP_001917973.1| MutS2 family protein [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351115|gb|ACB85385.1| MutS2 family protein [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 796
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 246/833 (29%), Positives = 400/833 (48%), Gaps = 108/833 (12%)
Query: 24 LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLT 83
L +TS A ++ + + L + DI L A L E+ + + V+N +K+T
Sbjct: 48 LKETSEAKELLAERDISLRGLRDIRKQLQLAAKDGTLQGPELFQISEII-GVSNRVRKIT 106
Query: 84 EAAELDGDSLQRYSPLLE----LLKNCNFLT-ELEEKIGFCIDCKLLIILDRASEDLELI 138
+ D+ Q P+L L N L EL++KI + K D AS +L I
Sbjct: 107 D------DNFQANYPILSSLISKLPELNHLKKELDDKIDENGEVK-----DSASVNLRNI 155
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
R + K+ L S +K +I Q+G + ++T R R V +KA ++ ++P GI
Sbjct: 156 RQKIKK----LQSQVKTSVNRILQSGEKYLQDKIVTMRYDRYVVPVKAEYQNMVP-GIIH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSG T ++EPK VE NN + E +E IL L+ +I ++ + ++
Sbjct: 211 DQSSSGMTVYIEPKEVVEKNNELRQAKREEHSELEKILQGLSQKIKGYHYQLHDSLQILV 270
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+D A+ ++ M+ L+ + + I+G KHPLL
Sbjct: 271 ELDFILAKGSLSRRMNAREAELNQEKRLEI-----IKG-KHPLL---------------- 308
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ +P+D+K+ E +VITGPNTGGKT S+K +GL +L
Sbjct: 309 --------------------GEDAIPVDVKLGDEFNTMVITGPNTGGKTVSLKMVGLFTL 348
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA+ + F+ + ADIGD Q +EQ+LSTFS H+S IV I++ + ESL+L
Sbjct: 349 MTQSGLHIPAERGTEMGVFEQVFADIGDEQDIEQSLSTFSSHMSNIVKIVDHANSESLIL 408
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP+EG ALA S+L++ + ++ TTHY L ENA+ EF E
Sbjct: 409 LDELGAGTDPTEGSALAMSLLEHFHNLGCRSIATTHYTQLKSFAHAREGVENASVEFDEE 468
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
TL PTY +L G G SNA I++ +G KII A+ + E + E EL SL
Sbjct: 469 TLEPTYNLLIGVPGKSNAFVISRRLGLSDKIISNAKSFLADEEIEVE-------ELITSL 521
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
E+ + + A++ + ++E E K++ R+ + K +Q ++ ++ AK
Sbjct: 522 TEKEKSSQKMKEELERERAKVEQVKAQLEQERKEISRKKDEVLQKARRQAEEIISDAK-- 579
Query: 615 IDTVVQDFENQLRDA----------SADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
+D E L++A E++S +++ S + D SV +
Sbjct: 580 -----RDAEESLKEARKIAEKKSHKEMAEVSSKVRDKLSGHQQKLREELMDSADSVP-LS 633
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P G V++ +L DK +++V D VQ G M+V V ++I P+ + K+
Sbjct: 634 PEKLKP--GLTVYISNL-DKEGQILQVNHDKGEAEVQVGIMKVNVNFSDI--FPSEEEKS 688
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
+ + + + S S G N A R+ T LD+RG RVEEA +Q+D L
Sbjct: 689 GSTFSGNV-----NSSSSSTGRGNVFAGKKERIST---ELDIRGERVEEAINQVDKYLDD 740
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
A + + +IHG GTG +++ + L HP V++Y + G V +K
Sbjct: 741 ALVAGLAEIRIIHGKGTGNLRKGIQFHLEGHPMVSQYRLGNRQEGGEGVTVVK 793
>gi|29375971|ref|NP_815125.1| MutS2 family protein [Enterococcus faecalis V583]
gi|227518669|ref|ZP_03948718.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX0104]
gi|227553200|ref|ZP_03983249.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
HH22]
gi|422715235|ref|ZP_16771958.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309A]
gi|422716036|ref|ZP_16772752.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309B]
gi|424676844|ref|ZP_18113715.1| MutS2 family protein [Enterococcus faecalis ERV103]
gi|424681338|ref|ZP_18118125.1| MutS2 family protein [Enterococcus faecalis ERV116]
gi|424683526|ref|ZP_18120276.1| MutS2 family protein [Enterococcus faecalis ERV129]
gi|424686569|ref|ZP_18123237.1| MutS2 family protein [Enterococcus faecalis ERV25]
gi|424690157|ref|ZP_18126692.1| MutS2 family protein [Enterococcus faecalis ERV31]
gi|424695180|ref|ZP_18131563.1| MutS2 family protein [Enterococcus faecalis ERV37]
gi|424697010|ref|ZP_18133351.1| MutS2 family protein [Enterococcus faecalis ERV41]
gi|424699605|ref|ZP_18135816.1| MutS2 family protein [Enterococcus faecalis ERV62]
gi|424703382|ref|ZP_18139516.1| MutS2 family protein [Enterococcus faecalis ERV63]
gi|424706073|ref|ZP_18142086.1| MutS2 family protein [Enterococcus faecalis ERV65]
gi|424717217|ref|ZP_18146515.1| MutS2 family protein [Enterococcus faecalis ERV68]
gi|424720798|ref|ZP_18149899.1| MutS2 family protein [Enterococcus faecalis ERV72]
gi|424724349|ref|ZP_18153298.1| MutS2 family protein [Enterococcus faecalis ERV73]
gi|424733935|ref|ZP_18162490.1| MutS2 family protein [Enterococcus faecalis ERV81]
gi|424743762|ref|ZP_18172067.1| MutS2 family protein [Enterococcus faecalis ERV85]
gi|424749463|ref|ZP_18177566.1| MutS2 family protein [Enterococcus faecalis ERV93]
gi|81722394|sp|Q835H3.1|MUTS2_ENTFA RecName: Full=MutS2 protein
gi|29343433|gb|AAO81195.1| MutS2 family protein [Enterococcus faecalis V583]
gi|227073849|gb|EEI11812.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX0104]
gi|227177673|gb|EEI58645.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
HH22]
gi|315575541|gb|EFU87732.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309B]
gi|315580018|gb|EFU92209.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0309A]
gi|402351045|gb|EJU85937.1| MutS2 family protein [Enterococcus faecalis ERV116]
gi|402356464|gb|EJU91198.1| MutS2 family protein [Enterococcus faecalis ERV103]
gi|402364524|gb|EJU98959.1| MutS2 family protein [Enterococcus faecalis ERV129]
gi|402364844|gb|EJU99275.1| MutS2 family protein [Enterococcus faecalis ERV31]
gi|402367423|gb|EJV01764.1| MutS2 family protein [Enterococcus faecalis ERV25]
gi|402368722|gb|EJV03029.1| MutS2 family protein [Enterococcus faecalis ERV37]
gi|402375534|gb|EJV09514.1| MutS2 family protein [Enterococcus faecalis ERV62]
gi|402377339|gb|EJV11250.1| MutS2 family protein [Enterococcus faecalis ERV41]
gi|402385387|gb|EJV18927.1| MutS2 family protein [Enterococcus faecalis ERV63]
gi|402386565|gb|EJV20071.1| MutS2 family protein [Enterococcus faecalis ERV68]
gi|402388716|gb|EJV22144.1| MutS2 family protein [Enterococcus faecalis ERV65]
gi|402390945|gb|EJV24265.1| MutS2 family protein [Enterococcus faecalis ERV81]
gi|402393269|gb|EJV26499.1| MutS2 family protein [Enterococcus faecalis ERV72]
gi|402395332|gb|EJV28441.1| MutS2 family protein [Enterococcus faecalis ERV73]
gi|402399891|gb|EJV32745.1| MutS2 family protein [Enterococcus faecalis ERV85]
gi|402407714|gb|EJV40219.1| MutS2 family protein [Enterococcus faecalis ERV93]
Length = 788
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 252/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|323485118|ref|ZP_08090470.1| hypothetical protein HMPREF9474_02221 [Clostridium symbiosum
WAL-14163]
gi|323401548|gb|EGA93894.1| hypothetical protein HMPREF9474_02221 [Clostridium symbiosum
WAL-14163]
Length = 800
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 251/819 (30%), Positives = 388/819 (47%), Gaps = 116/819 (14%)
Query: 16 SLEESQKLLNQTS-AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR--TL 72
SLEE ++ +T+ AA + L ++D+ G L G L+ E+ AV T+
Sbjct: 39 SLEEIRRNQTETTDAATRVRMKGSLSFGGVKDVRGSLKRLEIGSSLNIIELLAVSSLLTV 98
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
A + + E +EL DSL E+ + LT + +I CI + + D AS
Sbjct: 99 TARAKAYGR-REESELPDDSLD------EMFRTLEPLTPVNTEIKRCIISED-DVSDDAS 150
Query: 133 EDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L +R K R L+S+L A + +A +IT R R C+ +K+ +K
Sbjct: 151 PGLSKVRKSMKIIAGRVHTQLNSVLNSSRAYLQEA------VITMRDGRYCLPVKSEYKN 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+G+T F+EP V+ NN L E E +L+ L+ E+ I
Sbjct: 205 QVP-GMVHDQSSTGSTIFIEPMAVVKLNNELRELEIQEKREIEFVLTALSGELVPYTDTI 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++ + ++D FA+A ++ + P +++ + INI+ +HPLL
Sbjct: 264 ALNLELLAKLDFIFAKAALSRHFNCTEPKFNNRRY------INIKDGRHPLL-------- 309
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+P + VPI+I + + ++++TGPNTGGKT S+
Sbjct: 310 -------DPKQV--------------------VPINIYLGDQFDLLIVTGPNTGGKTVSL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM +AGL++PA + L F+ + ADIGD QS+EQ+LSTFS H++ IV ILE
Sbjct: 343 KTVGLFTLMGQAGLHIPAFDGSELAVFEEVFADIGDEQSIEQSLSTFSAHMTNIVSILEQ 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SL L DE+G+GTDP+EG ALA ++L +L + + TTHY++L EN
Sbjct: 403 ADSNSLCLFDELGAGTDPTEGAALAIAVLSFLHNMSCRTMATTHYSELKVYALTTPGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A EFSLETLRPTYR+L G G SNA I+K +G II+ A+K + E++
Sbjct: 463 ACCEFSLETLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEDAKKHI-----EQEDESFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
+L L + R +E + AS ++ L R +E + + + + K ++ Q+ L
Sbjct: 518 DLLADLEDNRVTIEKERAEIASYKEQVAILKRRLEQKEERFSEQKDKMLEKAREEAQRIL 577
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR-------PDDDF--- 658
AK D ++ IN L K ES + +EA R D D
Sbjct: 578 QDAKDTADQTIRS------------INRLAK--ESGVNKELEAERSKLRNKLSDVDKKLA 623
Query: 659 ---SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
+V + S + + G+ V V S+ K TV +P + VQ G +R V NI+
Sbjct: 624 VKPAVPKKAVSPKSLRLGDTVRVLSMNLK-GTVSSLPNAKGDLYVQMGILRSLV---NIK 679
Query: 716 PIPNSKRKNAANPA-PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN-----SLDLRGM 769
+ K + P P QSG S N+ S +++ SK+ ++L GM
Sbjct: 680 DLELVDEKTISGPGIP---------QSGPRSSGNKNGSGSSKIKMSKSFSISPEINLIGM 730
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
V+EA LD L A + V+HG GTG +K V
Sbjct: 731 TVDEAVPALDKYLDDAYLAHLPQVRVVHGRGTGALKAGV 769
>gi|257419214|ref|ZP_05596208.1| MutS2 protein [Enterococcus faecalis T11]
gi|257161042|gb|EEU91002.1| MutS2 protein [Enterococcus faecalis T11]
Length = 788
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 252/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQVNHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|373494347|ref|ZP_09584952.1| hypothetical protein HMPREF0380_00590 [Eubacterium infirmum F0142]
gi|371968844|gb|EHO86298.1| hypothetical protein HMPREF0380_00590 [Eubacterium infirmum F0142]
Length = 796
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 225/828 (27%), Positives = 400/828 (48%), Gaps = 93/828 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
++L + T A +M+ L + DI L A G L+ ++ V+ L + V
Sbjct: 45 EELRSTTEAVDLIMRKGTLPTGGLYDIREALLLAKKGGSLTMRQLLEVQNVLAISSEV-- 102
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
A + D+L + E++ T LE++I CI + + D AS L+ IR
Sbjct: 103 ----VAFMHDDALPELKHIGEMVDLIVEFTALEKEISRCILTEDEMA-DNASPKLKDIRR 157
Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
R + + L ++ + ++T R R + +K ++ P G+ + S
Sbjct: 158 SIHRQNQAIKDKLSRIITSSSNKTYLQDAIVTMRDGRYVIPVKQEYRSFFP-GMVHDQSK 216
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
GAT F+EP+G VE NN L E E IL+ L++ +A+ REI+ ++ + ++D
Sbjct: 217 GGATLFIEPQGVVESNNKLRELEAEEQLEIARILAELSSRVAEHYREIRSNLELLTKLDF 276
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A+ + C + +S+ + D + + +HPL
Sbjct: 277 IMAKGKLS------CKMHASEPKIDADGELRLLSARHPL--------------------- 309
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
+E + VP+DI++ + R ++ITGPNTGGKT S+KT GL +M+++
Sbjct: 310 -IEYKK-------------AVPVDIRIGGDYRTLIITGPNTGGKTVSLKTAGLLVMMAQS 355
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
GL++PA + LP F + ADIGD QS+EQ+LSTFS H+ IV +++ S +SLVL+DE+
Sbjct: 356 GLHIPASHASTLPVFGDVFADIGDEQSIEQSLSTFSSHMKNIVSVIDKASYDSLVLVDEL 415
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP+EG ALA +IL+ D L + TTHY +L + ENAA EF +ETL P
Sbjct: 416 GAGTDPTEGAALAIAILERFYDSGALTMATTHYNELKKYALATSGVENAAMEFDVETLTP 475
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
TYR+L G G SNA I+K +G +I+RA + ++ E + + S+ +++RK
Sbjct: 476 TYRLLIGVPGKSNAFEISKKLGLSESVIERASEHIKHGDMEFEN-----VISSIEDDKRK 530
Query: 561 LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ 620
+ A + EI + R++E++ K + + A + A+ ++ ++ L K + V +
Sbjct: 531 AAADRLDAEEMRDEIEERLRKLEEKEKAISEKRADIIAEAKREARELLRETKSAVKDVQK 590
Query: 621 DFEN-QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT---SSFTPQFGEQV 676
D Q A + N+ E + + EA + V + N+ S+ T + G++V
Sbjct: 591 DLRKLQKSGARTNGFNT--GALEKSRRKLNEAENLVSEKVVKQVNSEPVSADTIKIGDRV 648
Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 736
+ +LG T++ +P + ++V G ++V+ + ++ I K
Sbjct: 649 KLLTLGQN-GTILSLPDEKGNLMVNIGVLKVKARLEDLMLINEGK--------------- 692
Query: 737 EDRQSGSAGSSNEEASYGPRVQTSKN----SLDLRGMRVEEASHQL-----DIALACWES 787
DR+ + SS YG ++T + S+++ G +++A + D+ +A +
Sbjct: 693 -DRKPQAKSSSR----YGTLLRTKSSSVSASINVMGKNLDDALADVEKYLDDVYMAGLD- 746
Query: 788 RSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
++ +IHG G G++K+ + ++L+ V + S + G V ++
Sbjct: 747 --MVSIIHGRGGGILKDGIRQMLKRKKYVDSFGAASYNDGGEGVTVVR 792
>gi|323694011|ref|ZP_08108195.1| MutS2 family protein [Clostridium symbiosum WAL-14673]
gi|355625337|ref|ZP_09048200.1| MutS2 protein [Clostridium sp. 7_3_54FAA]
gi|323501947|gb|EGB17825.1| MutS2 family protein [Clostridium symbiosum WAL-14673]
gi|354821364|gb|EHF05752.1| MutS2 protein [Clostridium sp. 7_3_54FAA]
Length = 800
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 251/819 (30%), Positives = 388/819 (47%), Gaps = 116/819 (14%)
Query: 16 SLEESQKLLNQTS-AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR--TL 72
SLEE ++ +T+ AA + L ++D+ G L G L+ E+ AV T+
Sbjct: 39 SLEEIRRNQTETTDAATRVRMKGSLSFGGVKDVRGSLKRLEIGSSLNIIELLAVSSLLTV 98
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
A + + E +EL DSL E+ + LT + +I CI + + D AS
Sbjct: 99 TARAKAYGR-REESELPDDSLD------EMFRTLEPLTPVNTEIKRCIISED-DVSDDAS 150
Query: 133 EDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L +R K R L+S+L A + +A +IT R R C+ +K+ +K
Sbjct: 151 PGLSKVRKSMKIIAGRVHTQLNSVLNSSRAYLQEA------VITMRDGRYCLPVKSEYKN 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+G+T F+EP V+ NN L E E +L+ L+ E+ I
Sbjct: 205 QVP-GMVHDQSSTGSTIFIEPMAVVKLNNELRELEIQEKREIEFVLTALSGELVPYTDTI 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++ + ++D FA+A ++ + P +++ + INI+ +HPLL
Sbjct: 264 ALNLELLAKLDFIFAKAALSRHFNCTEPKFNNRRY------INIKDGRHPLL-------- 309
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+P + VPI+I + + ++++TGPNTGGKT S+
Sbjct: 310 -------DPKQV--------------------VPINIYLGDQFDLLIVTGPNTGGKTVSL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM +AGL++PA + L F+ + ADIGD QS+EQ+LSTFS H++ IV ILE
Sbjct: 343 KTVGLFTLMGQAGLHIPAFDGSELAVFEEVFADIGDEQSIEQSLSTFSAHMTNIVSILEQ 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SL L DE+G+GTDP+EG ALA ++L +L + + TTHY++L EN
Sbjct: 403 ADSNSLCLFDELGAGTDPTEGAALAIAVLSFLHNMSCRTMATTHYSELKVYALTTPGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A EFSLETLRPTYR+L G G SNA I+K +G II+ A+K + E++
Sbjct: 463 ACCEFSLETLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEDAKKHI-----EQEDESFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
+L L + R +E + AS ++ L R +E + + + + K ++ Q+ L
Sbjct: 518 DLLADLEDNRVTIEKERAEIASYKEQVAILKRRLEQKEERFSEQKDKMLEKAREEAQRIL 577
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR-------PDDDF--- 658
AK D ++ IN L K ES + +EA R D D
Sbjct: 578 QDAKDTADQTIRS------------INRLAK--ESGVNKELEAERSKLRNKLSDIDKKLA 623
Query: 659 ---SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
+V + S + + G+ V V S+ K TV +P + VQ G +R V NI+
Sbjct: 624 VKPAVPKKAVSPKSLRLGDTVRVLSMNLK-GTVSSLPNAKGDLYVQMGILRSLV---NIK 679
Query: 716 PIPNSKRKNAANPA-PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN-----SLDLRGM 769
+ K + P P QSG S N+ S +++ SK+ ++L GM
Sbjct: 680 DLELVDEKTISGPGIP---------QSGPRSSGNKNGSGSSKIKMSKSFSISPEINLIGM 730
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
V+EA LD L A + V+HG GTG +K V
Sbjct: 731 TVDEAVPALDKYLDDAYLAHLPQVRVVHGRGTGALKAGV 769
>gi|389575981|ref|ZP_10166009.1| MutS2 family protein [Eubacterium cellulosolvens 6]
gi|389311466|gb|EIM56399.1| MutS2 family protein [Eubacterium cellulosolvens 6]
Length = 791
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 235/775 (30%), Positives = 366/775 (47%), Gaps = 98/775 (12%)
Query: 56 SGQLLSPS---EICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTEL 112
+G+LLS + E CA + +N A+ + DSL P+ +LL N LT L
Sbjct: 86 AGELLSIAGLLENCARAKAFGRHDN--------ADTEEDSL---DPIFDLL---NPLTPL 131
Query: 113 EEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
+I CI + I D AS L IR + +N + + S L+ + + + +IT
Sbjct: 132 STEIRRCILSEDEIA-DDASSTLRQIRRQISQNGDKIHSQLQSMINGPLR-NALQDAVIT 189
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R CV +KA ++ +P G+ + SS+GAT F+EP V+ NN L E E
Sbjct: 190 MRDGRYCVPVKAENRSAVP-GMIHDQSSTGATLFIEPMAIVKLNNDIRELELKEQKEIEV 248
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL+ L+A A+ +I Y + + E+D FAR G A M P+ +++ IN+
Sbjct: 249 ILATLSASAAEHVEDISYDLQNLAELDFIFARGGLALDMKATEPVFNTEGR------INL 302
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+HPL+ + VPID+ +
Sbjct: 303 RKARHPLIDKHRV-----------------------------------VPIDVHLGDSFD 327
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
++++TGPNTGGKT S+KT+GL +LM +AGL++P + L F + ADIGD QS+EQ+L
Sbjct: 328 LLIVTGPNTGGKTVSLKTVGLLTLMGQAGLHIPTLDRSELSVFTEVYADIGDEQSIEQSL 387
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
STFS H++ IV +E R SLVL DE+G+GTDP+EG ALA +IL +L + + TTH
Sbjct: 388 STFSSHMTNIVSFIEKADRNSLVLFDELGAGTDPTEGAALAIAILSHLHRQGIRTMATTH 447
Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
Y++L + ENA+ EF++ETL+PTYR+L G G SNA I+ +G II A+
Sbjct: 448 YSELKIFALSTDKVENASCEFNIETLQPTYRLLIGVPGKSNAFAISSKLGLPDYIIDDAK 507
Query: 533 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 592
+ Q ++ SL + R E++ R ++ L +E+++ + L+ +
Sbjct: 508 GQI-----SEQDESFEDVLSSLEQNRIAQENEQRAIEYRKQQLEKLEKELKNRERTLETQ 562
Query: 593 AAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL-IKESESAIAAIVEA 651
+ K +Q + L AK D V++DF R +NS ++ + + ++
Sbjct: 563 KNKIIEKANEQARTVLQDAKTYADQVMKDF----RKFGKAGVNSAEMERKRNELRKEMDK 618
Query: 652 HRPDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
+E P Q G V V SL K TV P + V+ G +R +
Sbjct: 619 TASKAQVKPAERTGKKVRPQDLQLGTAVKVLSLNLK-GTVSSKPDSRGNLFVRMGIIRSK 677
Query: 709 VKKNNIRPI--PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 766
V +++ I P++ K ++ GS S V + N L
Sbjct: 678 VNISDLEIIDEPDTITKTTSH----------------IGSGKIRMSKAMNVSSEIN---L 718
Query: 767 RGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
G V+EA +LD L A S + VIHG GTG +++ V + L+ R+A +
Sbjct: 719 LGKTVDEAVAELDKYLDDAVLAHLSSVRVIHGKGTGALRKGVHQYLKTQRRIADF 773
>gi|169829506|ref|YP_001699664.1| MutS2 protein [Lysinibacillus sphaericus C3-41]
gi|168993994|gb|ACA41534.1| MutS2 protein [Lysinibacillus sphaericus C3-41]
Length = 788
Score = 278 bits (711), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 244/835 (29%), Positives = 393/835 (47%), Gaps = 113/835 (13%)
Query: 22 KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+LL + L++++ + + + I D+ A G +L+ E+ + T+RA + + +
Sbjct: 46 QLLEEMDEGLSILRVKGNVPMGGIFDVRPSARRAQIGGMLAAIELMEISSTIRA-SRILR 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
E +L+ D + + + LT L+ +I CID +LD AS L IR
Sbjct: 105 NFIE--DLEADEVIEIPHFIAKKETMPVLTGLQHEINNCIDDNG-AVLDSASTTLRTIRQ 161
Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+E + L+SL++ A + L+T R R + +K +++ GI
Sbjct: 162 SLRSEEAKVRSKLESLIRGSNASKM----LSDTLVTIRNDRFVIPVKQEYRHHY-GGIVH 216
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSG T F+EP V+ NN RL E AE IL L+A + ++ L+ +
Sbjct: 217 DQSSSGQTLFIEPDSIVQANNEIHRLKMKEQAEVERILLALSAMVQDVAPDLFNLVKVLG 276
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+ID+ A+ + Q P ++ D I + +HPLL
Sbjct: 277 DIDVILAKGKYGQANKCTMPKMNQ------DGYIRLVRARHPLL---------------- 314
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P+ D VP DI+ + +VITGPNTGGKT ++KT+GL +L
Sbjct: 315 PI-------------------DIAVPNDIEFGKDITAIVITGPNTGGKTVTLKTVGLCTL 355
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL +PA + +L F + ADIGD QS+EQ+LSTFS H+ IVDIL+ ESLVL
Sbjct: 356 MAQAGLPVPALDGSQLAVFKQLFADIGDEQSIEQSLSTFSSHMVNIVDILQKFDHESLVL 415
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA SIL + R + TTHY +L NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAISILDEVHGRGARVMATTHYPELKAYGYNRPGVANASVEFDIE 475
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TL PTYR+L G G SNA I+ +G II+RA+ R H + SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISSRLGLPESIIERAKGFTGTDR-----HEVESMIASLEE 530
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
RR+ E A + +L E L +E++D+ + + R L K ++ ++ + AK + +
Sbjct: 531 TRRQSEDDAERSHALLLESESLRKELQDKLQAYEERKEALDKKAKEKARKIVEEAKREAE 590
Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN----------TS 666
++ + ++A + ++KE E ++EA + ++ + E N
Sbjct: 591 GIIAELREMRKNA-----DQVVKEHE-----LIEARKRLEEATPLENNKVLKKAAQVKAR 640
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
+ G++V V S G + T++E + + V VQ G +++++ +++ I K
Sbjct: 641 AQNLVVGDEVKVLSYGQR-GTLLEKVSNTEWV-VQMGILKMKISDSDLEYIKPEKE---- 694
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIAL 782
P +R +AG N K LDLRG R E+A +D AL
Sbjct: 695 ---PIVR---------TAGVKNRNGHV-------KLELDLRGERYEDAILRTEKYIDDAL 735
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
R + +IHG+GTG +++ + L+N+ RV ++ + G TV +K
Sbjct: 736 LANYGR--VSIIHGVGTGALRQGIQSYLKNNKRVKSFRFGEAGEGGLGVTVVELK 788
>gi|365158083|ref|ZP_09354324.1| MutS2 family protein [Bacillus smithii 7_3_47FAA]
gi|363621912|gb|EHL73094.1| MutS2 family protein [Bacillus smithii 7_3_47FAA]
Length = 784
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 246/827 (29%), Positives = 400/827 (48%), Gaps = 141/827 (17%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ + L + PLD + +I + A G LL+ E+ + T+ + + K
Sbjct: 47 QEETDEAATVLRVAGHAPLD--GLHNIRPHVKRAKIGGLLNGEELIQIAGTIYSGRMMKK 104
Query: 81 KLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E E +G+ L P+L E + LTELE I +D I LD AS L +R
Sbjct: 105 FIAELVE-NGEKL----PILSEQTEQIPVLTELEHDIKRAVDENGEI-LDSASSTLREVR 158
Query: 140 AERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
++ + R E L+S+++ AQ + I +T R R + +K +++ GI
Sbjct: 159 SQIRIHEGRIRERLESMIRSKNAQKMLSDAI----VTIRNDRYVIPVKQEYRHHY-GGIV 213
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ SSSG T F+EP+ V+ NN +L E E IL L+A++ ++ E+ ++ +
Sbjct: 214 HDQSSSGQTLFIEPESIVQLNNQLKQLKLKEQEEIEKILRELSAKVQENADELLVIVQVM 273
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
++D FA+A A+ M P+++ + + I I +HPLL
Sbjct: 274 GDLDFIFAKAKLAKSMKASKPLMNREGY------IRIHQARHPLL--------------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
P++ VP DI++ + +VITGPNTGGKT ++KT+GL +
Sbjct: 313 -PIEE-------------------AVPNDIELGKDYTAIVITGPNTGGKTVTLKTIGLLT 352
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM+++GL +PA+ + F + ADIGD QS+EQ+LSTFS H+ IVDIL+ V+ ESLV
Sbjct: 353 LMAQSGLQIPAQEGSEMAVFHSVFADIGDEQSIEQSLSTFSSHMVNIVDILKEVTGESLV 412
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+G+GTDP EG ALA SIL + + V TTHY +L NA+ EF++
Sbjct: 413 LFDELGAGTDPQEGAALAISILDEVLEVGARVVATTHYPELKAYGYNRDGVINASVEFNV 472
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LVERLRPERQQ 544
ETL PTYR+L G G SNA I++ +G + KII+RA++ ++ L R+
Sbjct: 473 ETLSPTYRLLIGVPGRSNAFEISERLGLNHKIIERARQYTGADTNEVENMIASLERSRKL 532
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL-KAKETQQ 603
K E E R L+S + L ++ + Y + E+ +R A+ + + + +
Sbjct: 533 AEKEE-----QEARDYLKSAEKLLKDLQNQMQEFYEKKEEMYSRAEREASKIVEKAKEEA 587
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR------PDDD 657
+ + K+++ E N+ +KE E ++EA + P+ D
Sbjct: 588 EEIIRHLRKLRL-----------------EKNAEVKEHE-----LIEARKRLSDAMPEID 625
Query: 658 FSVSE---TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
+ + SF P G++V V S G K + +V G++ LVQ G +++ V ++++
Sbjct: 626 KKTPQPKAKRSRSFMP--GDEVKVLSFGQKGTILEKVDGNE--WLVQVGILKMNVNESDL 681
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
IP+ K+ +P P + +D G LDLRG R E+A
Sbjct: 682 EYIPSQKK---VDPKPLATVKGKDYHVGL-------------------ELDLRGERYEDA 719
Query: 775 SHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
++ D LA + S +IHG GTG +++ V E+L+ H V
Sbjct: 720 LIKVEKYIDDAVLAGYPRVS---IIHGKGTGALRKGVQELLKRHRSV 763
>gi|160878313|ref|YP_001557281.1| MutS2 family protein [Clostridium phytofermentans ISDg]
gi|229486372|sp|A9KR74.1|MUTS2_CLOPH RecName: Full=MutS2 protein
gi|160426979|gb|ABX40542.1| MutS2 family protein [Clostridium phytofermentans ISDg]
Length = 796
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 264/825 (32%), Positives = 386/825 (46%), Gaps = 108/825 (13%)
Query: 17 LEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGIL------NSAVSGQLLSPSEICAVR 69
LE+ ++ +T+ AL + ++ L S I DI L S +G+LL S +
Sbjct: 40 LEDIVQMQQETTDALTRLYAKGTLSFSGIPDIRDTLMRLEIGASLGAGELLKISSVLTA- 98
Query: 70 RTLRAVNNVW--KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
TLRA N + K E E D+L LLE L N +I CI + I
Sbjct: 99 -TLRAKNYGYNQKNNEETEEAAQDTLTERFHLLEPLSPIN------NEIRRCIISEEEIA 151
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
D AS L+ +R + K + + L + G + +IT R R C+ IK +K
Sbjct: 152 -DDASPGLKSVRRQIKITNDKIHESLGSILNSASTKGMLQDAIITMRNGRYCLPIKQEYK 210
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
G+ + SS+G+T F+EP V+ NN L+ E E IL+ L+ +A +
Sbjct: 211 NTF-QGMMHDQSSTGSTAFIEPMAIVKLNNELAELAVREQEEIEKILAELSNLVATEKYN 269
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+KY + E+D FARAG ++ M +SQ H + INI+ +HPL+
Sbjct: 270 LKYNQTTLAELDFIFARAGLSKNMK------ASQPHFNNRHYINIKKGRHPLI------- 316
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+P K VPIDI + ++VITGPNTGGKT S
Sbjct: 317 --------DPKKV--------------------VPIDIYFGDKFDLLVITGPNTGGKTVS 348
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM +AGL++PA + L F+ + ADIGD QS+EQ+LSTFS H++ V ILE
Sbjct: 349 LKTVGLFTLMGQAGLHIPAFDGSELSIFEEVYADIGDEQSIEQSLSTFSSHMTNTVSILE 408
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+ SLVL DE+G+GTDP+EG ALA +IL YL R + TTHY++L
Sbjct: 409 HANENSLVLFDELGAGTDPTEGAALAMAILSYLHQRKIRTMATTHYSELKIFALSTDGVS 468
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA EFS+ETL+PTYR+L G G SNA I+ +G II++A++ + +
Sbjct: 469 NACCEFSVETLQPTYRLLIGIPGKSNAFAISSKLGLSNYIIEKAREFI-----GTKDESF 523
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIE------DEAKDLDRRAAHLKAKET 601
++ +L R +E A E+ +L R++ D+AKD R A+ KA+
Sbjct: 524 EDVISNLEASRIAMEKDKAEAEQYKKEVEELKRKLAEKNSKIDDAKDRILREANEKAR-- 581
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ QE AK D ++ + N+ A+ KE E+ AA+ E D VS
Sbjct: 582 -TILQE---AKDYADETIRKY-NKWGAGGANN-----KEMENERAALREKLGDTDSSLVS 631
Query: 662 ET--NTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
+ N P + G+ VHV SL K +V +P + VQ G +R V +++
Sbjct: 632 KAKKNRKQHKPSDFKVGDSVHVISLNLK-GSVSTLPNAKGDLYVQMGILRSLVNISDLEL 690
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
I + + K QSG S + S P L++ G RV+EA
Sbjct: 691 I---------DEETIVAKALTKTQSGKIRMS-KSMSISPE-------LNIIGKRVDEALP 733
Query: 777 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+D L A + +IHG GTG +KE V L+ V Y
Sbjct: 734 LVDKYLDDAYLAHLPQVTIIHGRGTGALKEAVHAHLKRTNYVKGY 778
>gi|229829396|ref|ZP_04455465.1| hypothetical protein GCWU000342_01486 [Shuttleworthia satelles DSM
14600]
gi|229791827|gb|EEP27941.1| hypothetical protein GCWU000342_01486 [Shuttleworthia satelles DSM
14600]
Length = 816
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 228/715 (31%), Positives = 335/715 (46%), Gaps = 117/715 (16%)
Query: 149 LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFME 208
L+ +L A Q G +IT R R C+ ++A +K +P G+ + SSSGAT F+E
Sbjct: 171 LNRMLSSSARDYLQDG-----VITMRDGRYCLPVRAEYKNYVP-GMVHDSSSSGATLFIE 224
Query: 209 PKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
P V NN L E E IL L+ ++ ++ I+ DR+ E+D FA+ A
Sbjct: 225 PMSVVNLNNELRELEGKEEEEIARILRSLSDQVLENIETIQIDFDRLAELDFIFAKGQLA 284
Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
M +SQ + + I+++ +HPLL
Sbjct: 285 ADMS------ASQPDFNEEGIISLKAARHPLL---------------------------- 310
Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
+ VPIDI + ++V+TGPNTGGKT S+KT GL +LM +AGL++PA++
Sbjct: 311 -------DKNIVVPIDISLGQNYNLLVVTGPNTGGKTVSLKTCGLLTLMGQAGLHIPARD 363
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV------SRESLVLIDEIGS 442
H +L FD + ADIGD QS+EQ+LSTFS H++ IV IL+ V ++LVL DE+ +
Sbjct: 364 HSQLAVFDNVYADIGDEQSIEQSLSTFSSHMTNIVHILDGVDSVLANGHDALVLFDELCA 423
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GTDP+EG ALAT+IL L R + TTHY++L ENA+ EFSLETL PTY
Sbjct: 424 GTDPAEGAALATAILDRLHRRQVRVMATTHYSELKVYALSTEGVENASCEFSLETLSPTY 483
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 562
R+L G G SNA I+ +G II+ AQ ++ +S ++ L+ + LE
Sbjct: 484 RLLIGIPGKSNAFAISSKLGLAADIIRDAQSRID---------EESVSFEDLLAD---LE 531
Query: 563 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE-------LNFAKVQI 615
++ AE I+ LD+R A L A + + +Q L AK
Sbjct: 532 NRRVAIEKTQAETRAAKASIDKTRIQLDQRLAQLNASKDKVLQSANLEAARILKEAKETA 591
Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP----- 670
D ++DF R A+AD +++ A+ ++ + S P
Sbjct: 592 DKTIRDFHKYGRAAAADMTR--MEQDRRALGEKLKTRQNKSRASAGMEQERRKAPVPKAK 649
Query: 671 --QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI-------------R 715
G++V V S+G ATV +P + VQ G +R RVK ++ +
Sbjct: 650 DLHIGDKVKVLSMG-VTATVHSLPDKSGHLEVQMGIIRSRVKLTDLVLVSDQSLATLNGQ 708
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
+P + R+ A R SA S N+ A P ++ L GM +EA
Sbjct: 709 QLPGTGRRRAPGSGGR----------QSASSFNKSAFISPEIK-------LLGMSGDEAI 751
Query: 776 HQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
LD L A + V+HG GTGV+++RV E L +P V Y+ S YG
Sbjct: 752 CALDKYLDDAVLSHLREVRVVHGKGTGVLRQRVHEYLNGNPHVKSYDLAS---YG 803
>gi|168215509|ref|ZP_02641134.1| MutS2 family protein [Clostridium perfringens NCTC 8239]
gi|182382254|gb|EDT79733.1| MutS2 family protein [Clostridium perfringens NCTC 8239]
Length = 786
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 720
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|333896863|ref|YP_004470737.1| MutS2 protein [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112128|gb|AEF17065.1| MutS2 protein [Thermoanaerobacterium xylanolyticum LX-11]
Length = 786
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 209/659 (31%), Positives = 334/659 (50%), Gaps = 84/659 (12%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R V +K ++ G+ + SSSGAT F+EP VE NN +L E
Sbjct: 184 PIITIRNGRYVVPVKQEYRGTFK-GLIHDQSSSGATLFIEPMAVVELNNDLRQLEIKEQH 242
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ LT ++ K EI M + E+D+ FA+A ++ D PIL+++ +V
Sbjct: 243 EVERILAELTEDVGKHVDEINENMVVLKELDVIFAKAKYSISTDSTKPILNTKGYV---- 298
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
N++ +HPL+ SK D VPI I +
Sbjct: 299 --NLKNARHPLI--------------------------------SK---DAVVPISIHLG 321
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+VITGPNTGGKT ++KT+GL +LMS +GL +PA + +FD I DIGD QS+
Sbjct: 322 ESFNTLVITGPNTGGKTVTLKTVGLLTLMSMSGLNIPADEGSDVAFFDNIFVDIGDEQSI 381
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV IL V+ SLVL+DE+G+GTDP+EG ALA SIL +L +
Sbjct: 382 EQSLSTFSAHMTNIVKILNNVTSNSLVLLDELGAGTDPTEGAALAMSILDFLHRMNCRTI 441
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L K+ ENA+ EF +ETL+PTYR+ G G SNA I+K +G + +I
Sbjct: 442 ATTHYSELKQYALKNEGVENASVEFDVETLKPTYRLTIGIPGKSNAFEISKRLGLNDDVI 501
Query: 529 QRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
A+ + E L+ E ++ + L +R + E+ +L ++ L +E E +
Sbjct: 502 DNAKSYITSEELKFE-------DILKDLENKRIEAENAKEEIEALKNQVESLRQEYEKKI 554
Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAI 645
KD +R + K ++ ++ L K D ++ +L++A +D+ N LI+E+ +
Sbjct: 555 KDTEREREKIIEKAREKAKKILENTKATADEIIA----KLKEAEKSDKKNKLIEEARLKL 610
Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
+ + ++ SE P+ G+ +++ L D+ + P D V +Q
Sbjct: 611 KENI--NEMEESLKKSEIPEYKKVPKDVMPGQTLYIVPL-DQTGIALSEPDKDGNVKIQA 667
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G +++ V +N+R ++++ + G A NE+++ + T
Sbjct: 668 GILKMNVHISNLR--------------ETESSEEKEMEKGFAKYINEKST---NIST--- 707
Query: 763 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
S+DLRG +EEAS ++D L A + VIHG GTG ++ + +L+ + V +
Sbjct: 708 SIDLRGKTLEEASIEVDKYLDDAYLAGLKQVTVIHGKGTGTLRSGITRLLKMNKHVKSF 766
>gi|407477852|ref|YP_006791729.1| MutS2 protein [Exiguobacterium antarcticum B7]
gi|407061931|gb|AFS71121.1| MutS2 protein [Exiguobacterium antarcticum B7]
Length = 788
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 246/800 (30%), Positives = 379/800 (47%), Gaps = 121/800 (15%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+ D+ + A G +LS SE+ AV + + V K E D L R L +
Sbjct: 68 LTDVRSEVKRAEIGSVLSTSELLAVADVVYSGRQV-KAFQERLHEDHPDL-RLPALDSRI 125
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAA 158
L E+E+ I ID + + D AS+ L +R++ R++E +D +L+ +
Sbjct: 126 DQITKLVEIEQGIRHAIDDQG-TVQDSASDKLRALRSQL-RSLEGQVRSKIDGVLRSKSK 183
Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN- 217
+ A ++T R R CV +K ++ GI + S+SGAT F+EP+ V NN
Sbjct: 184 MLSDA------IVTMRNDRYCVPVKQEYRQAF-GGIVHDQSASGATLFIEPQAVVAANNE 236
Query: 218 -MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
E RL E AE IL+ L+A + ++ +D + E+D A+A + + V P
Sbjct: 237 IQEARLK--ERAEIERILAQLSALVGSVGDSLRINVDVLAELDFIMAKALYGHTIRAVEP 294
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
L+ H+ + +HP + P
Sbjct: 295 KLNENRHIVLKEA------RHPFI----------------P------------------- 313
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D VPI + + E +VITGPNTGGKT ++KT+GL LM ++GLY+PA + L FD
Sbjct: 314 DDEVVPITVSLGGEFTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAADETELSVFD 373
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H++ IV ++ + SLVL DE+G+GTDP+EG ALA +I
Sbjct: 374 AIYADIGDEQSIEQNLSTFSSHMTNIVSMMGKIDFMSLVLFDELGAGTDPTEGAALAIAI 433
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L ++ R TTHY++L NA+ EF +E+L PTYR+L G G SNA
Sbjct: 434 LDEVKRRGARVAATTHYSELKAYGYNREGVVNASMEFDVESLSPTYRLLIGVPGRSNAFE 493
Query: 517 IAKSIGFDRKII-----------QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA 565
I+K +G D ++I Q + ++ RL E + R L + L++E+++L +
Sbjct: 494 ISKRLGLDDRVISAARDQVGSDAQSVETMIGRL--EEAKQRAETLERELLQEQKRLVQER 551
Query: 566 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
AEI EI +A++ RA KE + V + L +
Sbjct: 552 EEFEQEQAEIHQEKNEILAKAEEKATRAVERAQKEAEAVIKRL---------------KE 596
Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPD-DDFSVSETNT-SSFTPQF--GEQVHVKSL 681
LRDA A + + LI+ + +E +P D +++ S+ TP F GE+V V +
Sbjct: 597 LRDAGAVKEHELIEARKQ-----LEQAKPSLQDQRIAKVKAKSNQTPVFAKGEEVKVTTF 651
Query: 682 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 741
K + + + T VQ G M+V VK +++ + K A + +K R
Sbjct: 652 NQKGYIINQNSNGEYT--VQVGIMKVNVKPSDLAKVGEVK------SASKTKK----RAG 699
Query: 742 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 799
G++ + AS LDLRG+RVEE +LD + A + + VIHG+GT
Sbjct: 700 GTSVTKQSAAS---------AELDLRGVRVEEGLAKLDRFMDQALLSNYEQIRVIHGLGT 750
Query: 800 GVVKERVLEILRNHPRVAKY 819
G +++ V E LR + V +
Sbjct: 751 GAMRQGVQEYLRGNRHVKTH 770
>gi|110799497|ref|YP_696563.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens ATCC 13124]
gi|123344633|sp|Q0TP77.1|MUTS2_CLOP1 RecName: Full=MutS2 protein
gi|110674144|gb|ABG83131.1| MutS2 family protein [Clostridium perfringens ATCC 13124]
Length = 786
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 720
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|150015832|ref|YP_001308086.1| recombination and DNA strand exchange inhibitor protein
[Clostridium beijerinckii NCIMB 8052]
gi|229486368|sp|A6LS00.1|MUTS2_CLOB8 RecName: Full=MutS2 protein
gi|149902297|gb|ABR33130.1| MutS2 family protein [Clostridium beijerinckii NCIMB 8052]
Length = 786
Score = 277 bits (709), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 242/817 (29%), Positives = 404/817 (49%), Gaps = 101/817 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+L E L +T+ AL ++ S+ PL+ + DI + A G LSP ++ V L
Sbjct: 39 NLYEINNKLEETNEALEILISKGNPPLE--GLADIHEGIERAKKGGTLSPGQLLKVGGML 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
+A N+ K+ + E++ + Y L +L + LE++I I + I D+AS
Sbjct: 97 KATRNM-KEFFKREEVE----KSYPKLEDLAYILAPVKALEDEIERAIVSEDEIS-DKAS 150
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLL 190
+ L IR R+++ +S +++ + I ++ + L T R R + +K+ +K +
Sbjct: 151 QTLCNIR----RSLKEKNSSVREKISSIVRSNSKYLQDDLYTMRGDRYVLPVKSEYKSQV 206
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P G+ + SS+GAT+F+EP V NN L E AE ILS L+ ++ +
Sbjct: 207 P-GLVHDQSSTGATFFIEPMSLVNLNNEIRELFLKEKAEIERILSDLSLKVKINGDSCLS 265
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++E D FA+ +A ++ + PI V D + +I +HPL
Sbjct: 266 NLKVLVEFDFIFAKGRYASALNAIKPI------VREDGAFSIFSGRHPL----------- 308
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+EN D VP DI + E + ++ITGPNTGGKT ++KT
Sbjct: 309 -----------IEN-------------DKVVPSDIYLGEEFQTLMITGPNTGGKTVTIKT 344
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL +M +GL +PA+++ + +F I ADIGD QS+EQ+LSTFS H++ IV+I++ V
Sbjct: 345 VGLLHIMGLSGLLIPARDNSSIAFFKEIFADIGDEQSIEQSLSTFSSHMTNIVNIMKHVD 404
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SL L DE+G+GTDP+EG ALA SIL+ LR+R + TTHY++L K ENA+
Sbjct: 405 DKSLALFDELGAGTDPAEGAALAVSILETLRNRGAKLIATTHYSELKAYALKTDGVENAS 464
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE---RQQH 545
EF +ETLRPTYR+L G G SNA I+K +G +I+RA++ + E L+ E R+
Sbjct: 465 VEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKEYMSEENLQFENLIRELQ 524
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHLKAKETQQV 604
KS + + E + L QA + E ++ ++A D R A + A +
Sbjct: 525 EKSIIAKKEAREAKMLRDQAEDLKKKYEEKLEKLENTREKAYMDARREAKEIIANAKDEA 584
Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
L + + Q + ++ ++E E I H+ ++ S TN
Sbjct: 585 DDILKAMRELEKLGIAGGGRQRLEEERKKLKDSLEEREKGI------HKMKENEGESITN 638
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
+ G + ++ SL K+ +V +P + V V+ G M+V VK ++ RK
Sbjct: 639 VT-----LGMEAYLPSLNQKV-IIVSMPDNRGEVQVEAGIMKVNVKLKDL-------RKT 685
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
++R+++E + + + ++ +DLRG+ EEA ++ D L
Sbjct: 686 QVTKEEKVRRKREVKLN---------------LSNVESRVDLRGLDAEEACYKADKYLDD 730
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + + ++HG GTGV+++ + ++L+ HP V Y
Sbjct: 731 AYMANLGEVTIVHGKGTGVLRKAINDMLKRHPHVKSY 767
>gi|168206066|ref|ZP_02632071.1| MutS2 family protein [Clostridium perfringens E str. JGS1987]
gi|170662410|gb|EDT15093.1| MutS2 family protein [Clostridium perfringens E str. JGS1987]
Length = 786
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 720
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|168214914|ref|ZP_02640539.1| MutS2 family protein [Clostridium perfringens CPE str. F4969]
gi|170713649|gb|EDT25831.1| MutS2 family protein [Clostridium perfringens CPE str. F4969]
Length = 786
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTMPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 720
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|422736468|ref|ZP_16792731.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1341]
gi|315166623|gb|EFU10640.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1341]
Length = 788
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 254/841 (30%), Positives = 406/841 (48%), Gaps = 127/841 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYRE-IEDEAKDLD--RRAAHLKAK 599
+ L E RRK+ +AR +A+LH E+ + Y+ E+ K+L R+ A+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEEREKELQKARKEANKIIA 580
Query: 600 ETQQVQQEL--NFAKVQIDTVVQDF--ENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
E ++ + + + K+Q+++ Q E+QL DA S + E+ +A
Sbjct: 581 EAEENAETIISDIRKMQLESGQQGGVKEHQLIDAKTQL--SRLHHEETKLA--------- 629
Query: 656 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
V + + G++V V + G + T+++ G VQ G +++ V + ++
Sbjct: 630 -KNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEEDMT 686
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
P+ AP Q+E + + S E + G + LDLRG R EEA
Sbjct: 687 PV-----------AP----QKEAKPRVTTIRSAESSHVGTQ-------LDLRGKRYEEAL 724
Query: 776 HQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAY 833
++D I A + ++HG GTG ++ + E L+NH V YE +P N G A
Sbjct: 725 AEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGNGAT 783
Query: 834 I 834
+
Sbjct: 784 V 784
>gi|253579597|ref|ZP_04856866.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849098|gb|EES77059.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 793
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 244/844 (28%), Positives = 394/844 (46%), Gaps = 120/844 (14%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQL 59
MG + +K + P ++E + + QT AL + Q + +++D+ G L G
Sbjct: 26 MGKEICRKLE-P-STDIDEIRHMQTQTRDALTRLFQKGNISFGSVKDVRGSLKRLEIGSS 83
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAE--------LDG--DSLQRYSPLLELLKNCNFL 109
L E+ A+ L N V K +E LDG ++L+ +PL ++ C L
Sbjct: 84 LGIGELLAICSLLENTNRV--KAYSRSERGDSLPDSLDGMFEALEPLTPLTTEIRRC-IL 140
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGG 165
+E E I D AS +L IR K R L SL+ A Q
Sbjct: 141 SEDE-------------ISDDASSNLRQIRRNMKITGDRIHTQLSSLVNGSARNYLQ--- 184
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+IT R R C+ +KA +K +P G+ + SS+G+T F+EP V+ NN L
Sbjct: 185 --DSVITMRNGRYCIPVKAEYKGQVP-GMVHDQSSTGSTLFIEPMAIVKLNNDIRELELE 241
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E E ILS L+ + A+ I+ ++ ++++D+ FARA A M+ PI + +
Sbjct: 242 EQKEIEVILSTLSQQTAEQTDSIRADLNIMVQLDVIFARASLAMDMNATEPIFNDEGR-- 299
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
I ++ +HPL+ D + + VPIDI
Sbjct: 300 ----IRLKQARHPLI--------------------DKKKA---------------VPIDI 320
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
++ + ++VITGPNTGGKT S+KT+GL +LM ++GL++P + L F+ + ADIGD
Sbjct: 321 RLGDDFDLLVITGPNTGGKTVSLKTVGLLTLMGQSGLHIPTLDRSELALFEEVYADIGDE 380
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+EQ+LSTFS H++ +V L+ +R SLVL DE+G+GTDP+EG ALA +IL +L ++
Sbjct: 381 QSIEQSLSTFSSHMTNVVSFLKKANRHSLVLFDELGAGTDPTEGAALAIAILSHLHEQGI 440
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY++L + ENA EF +ETLRPTYR+L G G SNA I+ +G
Sbjct: 441 RTMATTHYSELKVYALSTSGVENACCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLPD 500
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
II +A++ + Q ++ SL R +E++ R EI L E+E +
Sbjct: 501 YIIDKAKEQI-----SEQDESFEDVLSSLESSRITIENERREIEQYKQEIASLKSEMESK 555
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ---DFENQLRDASADE-----INSL 637
+ L+ + + + ++ L AK D ++ F+ D SA E +
Sbjct: 556 QEKLNEQRDRIIRQANEEAHAVLREAKEYADQTMKMFHKFQKDHVDLSAVEKERQNLRKH 615
Query: 638 IKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
+ ++E + A +P + + + + G+ V V S+ K TV P +
Sbjct: 616 MNKAEKGMTQKTAAKKPKKELTAKDIS-------LGDAVKVLSMNLK-GTVSSRPDNKGF 667
Query: 698 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 757
+ VQ G +R +V +++ I ++ P + + R S +A S E
Sbjct: 668 LFVQMGIIRSKVHISDLELIDEAE---ITTPTMQRTGAGKIRMSKAAHVSTE-------- 716
Query: 758 QTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
++L G V+EA +LD L A + ++HG GTG +++ V L+
Sbjct: 717 ------INLLGKTVDEAIAELDKYLDDAYIAHLKSVRIVHGKGTGALRKGVHNYLKRQKH 770
Query: 816 VAKY 819
V +
Sbjct: 771 VESF 774
>gi|227510203|ref|ZP_03940252.1| MutS family DNA mismatch repair protein [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
gi|227190408|gb|EEI70475.1| MutS family DNA mismatch repair protein [Lactobacillus brevis
subsp. gravesensis ATCC 27305]
Length = 788
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 237/802 (29%), Positives = 380/802 (47%), Gaps = 109/802 (13%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
I N+++SG LS I + R +R +N+ + D + + +++ +
Sbjct: 80 IENASLSGTELS--HITKLLRAVRTINDFFDNFQ-------DEDVNLTVVSQIVSQLTLM 130
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
E+ +++ I+ ILD AS +L IR R ++ S + K + G K
Sbjct: 131 PEITKRMVQSINDDG-SILDTASSELRTIRRTINRTQNDIRSRMGK-----YLKGSDSKY 184
Query: 170 L----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
L IT R R + I+A +K GI + S+SG T ++EP VE NN R +
Sbjct: 185 LTESIITMREDRFVLPIRADYKQHFG-GIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLA 243
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E AEE IL+ LT I E+ M+ V ++D A+A FA + V P +S
Sbjct: 244 ERAEERRILAELTDLIRPYRSELLNNMNLVGQLDFVNAKAKFAHQIGAVQP------EIS 297
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
++ +N+ +HPL+ D V DI
Sbjct: 298 RENVVNLRRARHPLI-----------------------------------ARDKAVANDI 322
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
++ R ++ITGPNTGGKT ++KT+GL LM ++GL++ A ++ FD + ADIGD
Sbjct: 323 QIGDGYRTIIITGPNTGGKTITLKTVGLLQLMGQSGLFITANEESQIGVFDDVFADIGDD 382
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+E NLSTFS H+ I+ IL +S +SL+L+DE+G+GTDP EG ALA +I+ +
Sbjct: 383 QSIEANLSTFSSHMDNIISILNGMSSQSLILLDELGAGTDPKEGAALAMAIIDAIHQSGC 442
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY +L + NA+ EF +ETLRPTYR L G G SNALNIA +G +
Sbjct: 443 ELIATTHYPELKAYAYNRSGIINASMEFDIETLRPTYRFLMGIPGQSNALNIASKLGLSK 502
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHAEIMDLYREIE 583
+II++A+ + + Q+ +E +L+ Q + LH ++ + + + +
Sbjct: 503 EIIEKARAFTDSENQDINNMIDELTAQTKRAHDEADQLDEQLTDSTKLHDDLQNQFTQYQ 562
Query: 584 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE- 642
++ KD HL + +Q Q + AK+ D ++ D + + S IKE+E
Sbjct: 563 NQ-KD------HLLEQAREQANQVVEKAKISADKIIADLHKKQQQVG----QSAIKENEL 611
Query: 643 -SAIAAI----VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
A A+ V + + E F P G++V VKS G + T++ +
Sbjct: 612 IDAKGALNRLEVTPNLKKNKVLRKEKAKHDFHP--GDEVLVKSYGQQ-GTLIRQE-KNGA 667
Query: 698 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 757
VQ G +++++ +N++ K A + + Q + ++ S+G S P
Sbjct: 668 WEVQLGILKMQIDENDL-------EKAAPEKKAKQKYQTQVSRTRSSGMS-------P-- 711
Query: 758 QTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
+LDLRG R EEA ++LD I A + +IHG GTG +++ V E LR++ R
Sbjct: 712 -----TLDLRGHRYEEAMYELDRYIDSALLAGYPSVTIIHGKGTGALRKGVTEYLRSNAR 766
Query: 816 VAKYEQESPM--NYGCTVAYIK 835
+ + +P G TV K
Sbjct: 767 IKSFGYSAPNAGGDGSTVVKFK 788
>gi|172058180|ref|YP_001814640.1| MutS2 family protein [Exiguobacterium sibiricum 255-15]
gi|229486374|sp|B1YJY5.1|MUTS2_EXIS2 RecName: Full=MutS2 protein
gi|171990701|gb|ACB61623.1| MutS2 family protein [Exiguobacterium sibiricum 255-15]
Length = 788
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 244/801 (30%), Positives = 378/801 (47%), Gaps = 123/801 (15%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+ D+ + A G +LS SE+ AV + + V K E D L R L +
Sbjct: 68 LTDVRSEVKRAEIGSVLSTSELLAVADVVYSGRQV-KAFQERLHEDHPDL-RLPALDSRI 125
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAA 158
+ L E+E+ I ID + + D AS+ L +R++ R++E +D +L+ +
Sbjct: 126 EQITKLVEIEQGIRHAIDDQG-TVQDSASDKLRALRSQL-RSLEGQVRSKIDGVLRNKSK 183
Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN- 217
+ A ++T R R CV +K ++ GI + S+SGAT F+EP+ V NN
Sbjct: 184 MLSDA------IVTMRNDRYCVPVKQEYRQAF-GGIVHDQSASGATLFIEPQAVVAANNE 236
Query: 218 -MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
E RL E AE IL+ L+A + ++ +D + E+D A+A + + V P
Sbjct: 237 IQEARLK--ERAEIERILAQLSALVGSVGDSLRINVDVLAELDFIMAKALYGHTIRAVEP 294
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
L+ H+ + +HP + P
Sbjct: 295 RLNENRHIVLKEA------RHPFI----------------P------------------- 313
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
D VPI + + E +VITGPNTGGKT ++KT+GL LM ++GLY+PA + L FD
Sbjct: 314 DDEVVPITVSLGGEFTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAADETELSVFD 373
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H++ IV ++ + SLVL DE+G+GTDP+EG ALA +I
Sbjct: 374 AIYADIGDEQSIEQNLSTFSSHMTNIVSMMGKIDFMSLVLFDELGAGTDPTEGAALAIAI 433
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L ++ R TTHY++L NA+ EF +E+L PTYR+L G G SNA
Sbjct: 434 LDEVKRRGARVAATTHYSELKAYGYNREGVVNASMEFDVESLSPTYRLLIGVPGRSNAFE 493
Query: 517 IAKSIGFDRKII-----------QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA 565
I+K +G + ++I Q + ++ RL E + R L + L++E+++L +
Sbjct: 494 ISKRLGLEDRVIDAARDQVGTDAQSVETMIGRL--EEAKQRAESLERELLQEQQRLVEER 551
Query: 566 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
AEI EI +A++ RA KE + V + L +
Sbjct: 552 EEFEREQAEIHQEKNEILAKAEEKATRAVERAQKEAEAVIKRL---------------KE 596
Query: 626 LRDASADEINSLIKESESAIAAIVEAHRP---DDDFSVSETNTSSFTPQF--GEQVHVKS 680
LRDA A + + LI+ + +E +P D + + T+ P F GE+V V +
Sbjct: 597 LRDAGAVKEHELIEARKQ-----LEQAKPSLQDQRIAKVKAKTNQ-APVFAKGEEVKVTT 650
Query: 681 LGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQ 740
K + + + T VQ G M+V VK +++ + K A + +K R
Sbjct: 651 FNQKGYIINQNSNGEYT--VQVGIMKVNVKPSDLAKVGEVK------SASKTKK----RS 698
Query: 741 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMG 798
G++ + AS LDLRG+RVEE +LD + A + + VIHG+G
Sbjct: 699 GGTSITKQSAAS---------AELDLRGVRVEEGLAKLDRFMDQALLSNYEQIRVIHGLG 749
Query: 799 TGVVKERVLEILRNHPRVAKY 819
TG +++ V E LR + V +
Sbjct: 750 TGAMRQGVQEYLRGNRHVKTH 770
>gi|327475225|gb|AEA77207.1| MutS2 [Bacillus aquimaris]
Length = 786
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 257/846 (30%), Positives = 392/846 (46%), Gaps = 96/846 (11%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQL 59
+GHA V + +P EE L +T A+ +++ + L I DI + A G +
Sbjct: 26 LGHARVS-SLLP-SVEYEEIVHLHEETDEAMTILRLKGHAPLGGIFDIRPHVKRAQIGGM 83
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
L+PSE+ V T+RA +KLT+ E + L + L LE+ I
Sbjct: 84 LAPSELVQVASTIRA----SRKLTKFVEELLEEEVEIPLLENKMNTVIPLPYLEQNIRKV 139
Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
+D I LD ASE L IR + + N + L+K+ + +IT R R
Sbjct: 140 VDDNGEI-LDSASETLRSIRTQLRSNESRIREKLEKMTRSSNAQKMLSDAIITIRNDRYV 198
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +K ++ GI + SSSG T F+EP+ V NN L E E IL L+
Sbjct: 199 IPVKQEYRGHY-GGIIHDQSSSGQTLFIEPEAIVALNNQLRELRLKEQTEIEKILLALSV 257
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ ++ E+ ++ + ++D F +A F + + G PI++++ + + + +HPL
Sbjct: 258 EVQEAAEELLLIVSILSDVDFMFTKAKFGRSIKGSKPIINNEGRIKLNKA------RHPL 311
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
L P++ V N DI++ E +VITGP
Sbjct: 312 L----------------PIEEAVAN-------------------DIELGKEFSSIVITGP 336
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL ++M++AGL +PA + + F I ADIGD QS+EQ+LSTFS H+
Sbjct: 337 NTGGKTVTLKTLGLTNMMAQAGLPIPALDDSEVGIFRSIYADIGDEQSIEQSLSTFSSHM 396
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
IV+ILE V ESLVL DE+G+GTDP EG ALA SIL + + V TTHY +L
Sbjct: 397 VNIVEILEKVDHESLVLFDELGAGTDPQEGAALAISILDEVHGKGARVVATTHYPELKAY 456
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF +ETL PTY++L G G SNA I+K +G +I RA+ +
Sbjct: 457 GYNREGVVNASVEFDVETLSPTYKLLLGVPGRSNAFEISKRLGLSDSVILRAKSHIGTDT 516
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
E + + SL E RR+ E + A L + ++++++ + + + L K
Sbjct: 517 KEVEN-----MIASLEENRRQGEKELEEAHELLRQAEKMHKDMQKQMMEYYEKKDQLYEK 571
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--SAIAAIVEAHRPDDD 657
+ + AK + D V++D ++ SA IKE E A + EA
Sbjct: 572 AQLKASDLVEKAKEEADQVIKDLRRMQKEKSAQ-----IKEHELIHAKKQLEEATPKLKK 626
Query: 658 FSV--SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
SV S+ N + G++V V S K + +V + VQ G M+++VK++++
Sbjct: 627 SSVQKSKGNNGKQVLKAGDEVKVLSFDQKGHLIEKVSSKEWQ--VQMGIMKMKVKESDLE 684
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA- 774
I S++K P ++ G S LDLRG R E A
Sbjct: 685 FI-QSQQKVETKPLATVK--------------------GKDFHVSLE-LDLRGERFENAL 722
Query: 775 ---SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGC 829
+D AL R + +IHG GTG +++ V E L NH V ++ G
Sbjct: 723 SRVEKYIDDALLAGYPR--VSIIHGKGTGALRQGVQEYLNNHRSVKSIRFGDAGEGGTGV 780
Query: 830 TVAYIK 835
TV K
Sbjct: 781 TVVQFK 786
>gi|182417186|ref|ZP_02948554.1| MutS2 family protein [Clostridium butyricum 5521]
gi|237668115|ref|ZP_04528099.1| MutS2 family protein [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182379028|gb|EDT76534.1| MutS2 family protein [Clostridium butyricum 5521]
gi|237656463|gb|EEP54019.1| MutS2 family protein [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 786
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 238/820 (29%), Positives = 402/820 (49%), Gaps = 100/820 (12%)
Query: 12 PFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
P+ E + KL ++T+ AL ++ + P L + DI + A G L+P ++ +
Sbjct: 36 PYDNVYEINNKL-DETNEALEVILDKGNP-PLEGLFDIHEGVERARKGGTLTPEQLLKIG 93
Query: 70 RTLRAVNNVWKKLT-EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
TLRA N+ + E E + L+ + +L +KN LE+ I I + I
Sbjct: 94 STLRAARNMKEFFKREDFEKAYERLEDLAYILTPVKN------LEDDIERSIVSEEEIS- 146
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASH 186
D+AS L IR R+++ +S +++ + I ++ + L T R R + +K+ +
Sbjct: 147 DKASATLYNIR----RSLKEKNSSVREKISSIVRSHSKYLQDDLYTMRGDRYVIPVKSEY 202
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P GI + SS+GAT+F+EP V NN L E AE IL+ L+ ++ ++
Sbjct: 203 KSAVP-GIVHDQSSTGATFFIEPMSLVNLNNEIRELVLKEKAEIDRILAELSFKVKENSE 261
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ ++E D FA+A + + ++ V P++ D NI +HP++
Sbjct: 262 QCLSNFKMLVEFDFIFAKARYGERLNAVRPLIRE------DGRFNIYSGRHPMI------ 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
D VP D+ + + ++ITGPNTGGKT
Sbjct: 310 -----------------------------DDDKVVPSDVYIGEDFDTLMITGPNTGGKTV 340
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++K +GL +M +GL +PA+++ L +F + A+IGD QS+EQNLSTFS H++ IV+I+
Sbjct: 341 TIKMVGLLHIMGLSGLLIPARDNSSLSFFTEVFAEIGDEQSIEQNLSTFSSHMTNIVEIM 400
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
V +SLVL DEIGSGTDP+EG ALA SI++ LR R + TTHY++L K
Sbjct: 401 RYVDDKSLVLFDEIGSGTDPAEGAALAISIIETLRSRKSRIIATTHYSELKAYALKTDGV 460
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQ 544
ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I+RA+ + E L+ E
Sbjct: 461 ENASVEFDIETLRPTYRLLIGVPGKSNAFEISKRLGLVEGVIKRAKAYMSEENLQFEN-- 518
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKETQ 602
L + L E+ + +AR A++L E +L ED+ + L+ R A++ A+
Sbjct: 519 -----LIRDLQEKSIVAKKEAREASALKKEAEELKLRYEDKLQKLEKARDKAYMDAR--H 571
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
+ ++ + AK + D +++ + + ++E + +E H+ ++ E
Sbjct: 572 EAKEIIANAKEEADEILKAMRALEKMGIEGGGRARLEEERKKLKDSLE-HKEKGLHNMKE 630
Query: 663 TNTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
T G + + SL ++ ++ +P + V V+ G M++ VK ++R +K
Sbjct: 631 NEGEPITNVTLGMEAFLPSL-NQTVVIISMPDNRGDVQVEAGIMKINVKLKDLRKTKVTK 689
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 781
++ ++ SN E+ +DLRGM EEA ++ D
Sbjct: 690 QEKVKK-----------KREVKLNLSNIES-----------RVDLRGMDSEEACYKTDKY 727
Query: 782 L--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
L A + + ++HG GTGV++ + +L+ HP V +
Sbjct: 728 LDDAYRANLGEVTIVHGKGTGVLRNAITAMLKRHPHVKSF 767
>gi|393199976|ref|YP_006461818.1| mismatch repair ATPase [Solibacillus silvestris StLB046]
gi|327439307|dbj|BAK15672.1| mismatch repair ATPase [Solibacillus silvestris StLB046]
Length = 788
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 239/835 (28%), Positives = 395/835 (47%), Gaps = 113/835 (13%)
Query: 22 KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+LL + LA+++ + + L I D+ + G +LSP E+ + T+RA + + +
Sbjct: 46 ELLEEMDEGLAILRVKGNVPLGGIFDVRPHARRSQIGGMLSPMELMEIASTIRA-SRILR 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
E +++ ++ +E + LT L+ +I CID +LD AS L IR
Sbjct: 105 NFIE--DIESENTIEIPHFIERKEQMPVLTALQHEINDCIDDNG-TVLDSASPALRSIRQ 161
Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+E + + L+SL + A + I IT R R + +K ++ GI
Sbjct: 162 SLRSEESKVRQKLESLTRGANATKMLSDAI----ITIRNDRFVIPVKQEYRSHY-GGIVH 216
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SG T F+EP ++ NN RL E AE ILS LT + + EI L+ +
Sbjct: 217 DQSASGQTLFIEPDAVIQSNNEVQRLKVKEKAEIERILSELTLRVQEVGHEIFVLVQLLG 276
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+D+ A+ + Q P ++ + + + +HPLL
Sbjct: 277 EMDVILAKGKYGQANKCTMPKMNKEGYTRLVRA------RHPLL---------------- 314
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P++ V N+ I+ + +VITGPNTGGKT ++KT+GL ++
Sbjct: 315 PIEDAVANT-------------------IEFGRDVTAIVITGPNTGGKTVTLKTVGLCTI 355
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++ GL +PA + L F+ I ADIGD QS+EQ+LSTFS H+ IVDIL + +SL+L
Sbjct: 356 MAQCGLPVPALDGSELAVFEQIFADIGDEQSIEQSLSTFSSHMVNIVDILSKFNEKSLIL 415
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA +IL DR + T+HY +L NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAIAILDETVDRGARVMATSHYPELKAYGYNRPSVVNASVEFDIE 475
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TL PTYR+L G G SNA I+K +G +I A+ R H + SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISKRLGLSSNVIDHAKSFTGTDR-----HEVESMIASLEE 530
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
R + E +A A L + + E+E+ + D + +L+ K + ++ ++ AK + +
Sbjct: 531 SRLRSEREADEAHLLLEDAQKIRAELEERLRIYDEKKENLEKKAKDKARKIVDDAKKEAE 590
Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR------PDDDFSVSETNTSSF-- 668
T++ + +A+ +KE E +++A + P D+ V + ++
Sbjct: 591 TIIAELRKMKENAALS-----VKEHE-----LIDAKKRLDNAAPIDNNKVLQKAVAARER 640
Query: 669 --TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
Q G++V V S G K T+++ G++ +VQ G +++++ ++++ + +++ A
Sbjct: 641 KQNLQVGDEVKVLSYGQK-GTLLQKAGNE--WVVQIGILKMKLPESDLEYV-KPEKEQAT 696
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIAL 782
P ++ R K LDLRG R EEA LD AL
Sbjct: 697 RPMMNVKN---------------------RNSVVKLELDLRGERYEEALIRTEKYLDDAL 735
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
R + +IHG GTG +++ + L+NH RV +Y + +G TV +K
Sbjct: 736 LANYPR--VSIIHGKGTGALRQGIQNFLKNHKRVKSYRYGEAGEGGFGVTVVELK 788
>gi|169343643|ref|ZP_02864642.1| MutS2 family protein [Clostridium perfringens C str. JGS1495]
gi|169298203|gb|EDS80293.1| MutS2 family protein [Clostridium perfringens C str. JGS1495]
Length = 786
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 720
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSRPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|414153028|ref|ZP_11409355.1| MutS2 protein [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
gi|411455410|emb|CCO07257.1| MutS2 protein [Desulfotomaculum hydrothermale Lam5 = DSM 18033]
Length = 783
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 241/811 (29%), Positives = 391/811 (48%), Gaps = 100/811 (12%)
Query: 21 QKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
++ L +TS +++ PL +LS DI L +L+ E+ AV TL A +
Sbjct: 43 KRRLAETSEGRELLRLDPLAELSGWHDIRDALARVSRYAVLAAEELLAVGETLAASRRIK 102
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
K E + RY L E+ + +LE+ I I I D AS L IR
Sbjct: 103 KFFNEKS-------HRYPLLSEIAASLTQQPQLEKDILRAI-LPGGEIADHASPQLLQIR 154
Query: 140 A----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ R E ++S+++ Q + + +P++T R+ R + +K ++ +P GI
Sbjct: 155 RGILRAQNRIRERVESIIRAPENQKY----LQEPIVTVRQDRYVIPVKQEYRNQIP-GIV 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SGAT F+EP V+ NN RL +E E IL+ L+ ++ +E+ + +
Sbjct: 210 HDQSASGATLFVEPLAVVDANNEVRRLMAAEKQEIQRILAELSQGVSAVAQELSLALQAL 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
E+D ARA ++ + P ++ S I I+ +HPLL G +
Sbjct: 270 AELDYIMARARYSLKLKAWSPQITEGS-----PYIYIKQGRHPLLPGDA----------- 313
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VP I++ + +VITGPNTGGKT ++KT+GL +
Sbjct: 314 -------------------------VPATIELGKNFKTLVITGPNTGGKTVTLKTVGLFA 348
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM++AGL++PA+ + + I ADIGD QS+EQ+LSTFS H++ IV IL+ V +SLV
Sbjct: 349 LMTQAGLHIPAEAGTTMGVYKKIFADIGDEQSIEQSLSTFSSHMTNIVHILQQVDEDSLV 408
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+G+GTDP+EG ALA +IL+ L +R + TTHY++L ENA+ EF
Sbjct: 409 LLDELGAGTDPTEGAALARAILEELHNRGACTIATTHYSELKNYAYTTPGVENASVEFDA 468
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
ETLRPTYR+L G G SNA I+ +G I+ RA++ + +Q + +EL L
Sbjct: 469 ETLRPTYRLLIGRPGRSNAFEISARLGLRPDIVNRARQFL-----TTEQVQVAELINKLE 523
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
+ ++ E AA+L E L E A++L + + A+ ++ + A+++
Sbjct: 524 KTQQAAEKDRAAAAALRRESEQLQEEYRRLAEELRTKKEEILARAHEEAGSFVRRARLEA 583
Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVE-----AHRPDDDFSVSETNTSSFTP 670
+ V++ +L + + I+++ S + + A +P V + P
Sbjct: 584 EEAVKELRARLAEENTKNREEAIQQARSKLQQVTNKVTTGAPQPAAAGEVPD----QVKP 639
Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
GE+V + K A V+ V G++ V VQ G +++ V P+ +R N P
Sbjct: 640 --GEEVFLPKYNQK-AYVLSVSGEN--VQVQAGILKMVV------PVQELRRVN----TP 684
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESR 788
R+ + G S + T SLDLRGM +EA +++ L A
Sbjct: 685 RV----------TTGESKVGKVLTDKALTVSTSLDLRGMTGDEAWPEIEKYLDDAFLAGL 734
Query: 789 SVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ + +IHG GTG ++ V L++HPRV +
Sbjct: 735 NSVILIHGKGTGALRAAVHRELKSHPRVKSF 765
>gi|422346549|ref|ZP_16427463.1| MutS2 protein [Clostridium perfringens WAL-14572]
gi|373226094|gb|EHP48421.1| MutS2 protein [Clostridium perfringens WAL-14572]
Length = 786
Score = 276 bits (707), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 224/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S +L DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFILFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 720
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|256762410|ref|ZP_05502990.1| DNA mismatch repair protein mutS [Enterococcus faecalis T3]
gi|307277459|ref|ZP_07558551.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2134]
gi|422694899|ref|ZP_16752887.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4244]
gi|256683661|gb|EEU23356.1| DNA mismatch repair protein mutS [Enterococcus faecalis T3]
gi|306505724|gb|EFM74902.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2134]
gi|315147901|gb|EFT91917.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4244]
Length = 788
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 251/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|295107995|emb|CBL21948.1| MutS2 family protein [Ruminococcus obeum A2-162]
Length = 793
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 250/832 (30%), Positives = 378/832 (45%), Gaps = 126/832 (15%)
Query: 17 LEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL--- 72
LEE + + QT AL + Q + +++DI G L G L EI A+ L
Sbjct: 40 LEEIRLMQIQTKDALTRLFQKGSVSFGSVKDIRGSLKRLEIGSSLGIQEILAICALLENT 99
Query: 73 ---RAVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+A + + LDG D+L +PL ++ C L+E E
Sbjct: 100 SRVKAYSRKERNDLPVDSLDGMFDALSPLTPLSAEIRRC-ILSEDE-------------F 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKRRSRMCVGIKA 184
D AS L IR RNM+ + + + G + +IT R R C+ +KA
Sbjct: 146 SDDASPALRQIR----RNMKITNDRIHTQLTSLVNGGVRTYLQDSVITMRNGRYCIPVKA 201
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+G+T F+EP V+ NN L E E IL+ L+ +IA
Sbjct: 202 EYKGQVP-GMIHDQSSTGSTLFIEPMSVVKLNNDMRELELQEQKEIEVILADLSQQIALE 260
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ I + ++++D FARA A M+ PI + + IN++ +HPL+
Sbjct: 261 QETISLNLKIMVQLDFIFARAALAMDMNASEPIFNDEGR------INLKKARHPLI---- 310
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
N + VPIDI++ ++VITGPNTGGK
Sbjct: 311 ---------NKKKV----------------------VPIDIRLGDTFDLLVITGPNTGGK 339
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T S+KT+GL +LM ++GL++P + L F + ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 340 TVSLKTVGLLTLMGQSGLHIPTLDRSELALFHEVYADIGDEQSIEQSLSTFSSHMTNIVS 399
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
L+ R SLVL DE+ SGTDP+EG ALA SIL YL +R + TTHY++L +
Sbjct: 400 FLDKADRHSLVLFDELCSGTDPTEGAALAISILSYLHERGIRTMATTHYSELKVFALSAS 459
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
ENA EF +ETL PTYR+L G G SNA I+ +G + II++A+ E+L Q
Sbjct: 460 GVENACCEFDVETLSPTYRLLIGIPGKSNAFAISSKLGIPQSIIEKAK---EQLN--EQD 514
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD---RRAAHLKAKET 601
++ SL E R +E++ A EI L +++E + + LD R +E
Sbjct: 515 ESFEDVLTSLEESRVTIENERTEIAQYKQEIETLKKQLESKQEKLDIQKDRIIRQANEEA 574
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADE-----INSLIKESESAIAAIVEAHRPDD 656
+V QE Q + F N D +A E + + ++E ++ +P
Sbjct: 575 HKVLQEAKDYADQTMKLFHKFHNDYVDTAAVERERQKLRQKLNKTEQKMSQPAAKKKPKK 634
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
+ + + G+ V V S+ K T+ P + VQ G +R +V +++
Sbjct: 635 ELTAKDVRP-------GDTVRVLSMNLK-GTISTRPDSKGYLFVQMGIIRSKVHISDLEL 686
Query: 717 I-------PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
I P+ R A R S SA S E ++L G
Sbjct: 687 IDEPVITTPSLSRTGAGKI----------RMSKSASVSTE--------------INLLGK 722
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
V+EA +LD L A + ++HG GTG +++ V L+ VA Y
Sbjct: 723 TVDEAIAELDKYLDDAYIAHLKTVRIVHGKGTGALRKGVHNYLKRQKHVASY 774
>gi|257082629|ref|ZP_05576990.1| MutS 2 protein [Enterococcus faecalis E1Sol]
gi|256990659|gb|EEU77961.1| MutS 2 protein [Enterococcus faecalis E1Sol]
Length = 788
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 251/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNVF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|256962011|ref|ZP_05566182.1| MutS 2 protein [Enterococcus faecalis Merz96]
gi|257089797|ref|ZP_05584158.1| MutS 2 protein [Enterococcus faecalis CH188]
gi|293382380|ref|ZP_06628319.1| DNA mismatch repair protein MutS [Enterococcus faecalis R712]
gi|293389358|ref|ZP_06633816.1| DNA mismatch repair protein MutS [Enterococcus faecalis S613]
gi|312904147|ref|ZP_07763315.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0635]
gi|312907378|ref|ZP_07766369.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 512]
gi|312909995|ref|ZP_07768842.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 516]
gi|422689484|ref|ZP_16747596.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0630]
gi|256952507|gb|EEU69139.1| MutS 2 protein [Enterococcus faecalis Merz96]
gi|256998609|gb|EEU85129.1| MutS 2 protein [Enterococcus faecalis CH188]
gi|291080325|gb|EFE17689.1| DNA mismatch repair protein MutS [Enterococcus faecalis R712]
gi|291081245|gb|EFE18208.1| DNA mismatch repair protein MutS [Enterococcus faecalis S613]
gi|310626406|gb|EFQ09689.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 512]
gi|310632623|gb|EFQ15906.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0635]
gi|311289268|gb|EFQ67824.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis DAPTO 516]
gi|315577532|gb|EFU89723.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0630]
Length = 788
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 251/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|170755146|ref|YP_001782757.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum B1 str. Okra]
gi|429246442|ref|ZP_19209762.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001628]
gi|229486369|sp|B1IMK5.1|MUTS2_CLOBK RecName: Full=MutS2 protein
gi|169120358|gb|ACA44194.1| MutS2 family protein [Clostridium botulinum B1 str. Okra]
gi|428756532|gb|EKX79084.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum CFSAN001628]
Length = 788
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 237/813 (29%), Positives = 398/813 (48%), Gaps = 90/813 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S+ E ++ L +T A ++ ++ P + + DI ++ A L P ++ + L
Sbjct: 39 SVYEVREHLEETKEAFKLLITKGAPPFE--GVYDIRSGISLAEKRSTLLPGQLLKIAAVL 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
R + + E + Y L + + L ++EE+I I+ + I DRAS
Sbjct: 97 RCARRFKEYINHKEEEES-----YRVLENICEGIFSLPKIEEEIFNAIEGEDEIA-DRAS 150
Query: 133 EDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR K + ++SL++ ++ + + + T R R + +KA HK
Sbjct: 151 STLYNIRRSLKEKNYSVRDKINSLVRSYSSYL------QENIYTVRGDRYVLPVKAEHKG 204
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+P G+ + SS+GAT F+EP V NN L E AE IL++L+A+I + +
Sbjct: 205 AVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILTVLSAKINANITGV 263
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
K + V E+D FA+A FA + CP ++ + V IEG +HPL
Sbjct: 264 KTDANIVWELDFIFAKAKFASEYNCTCPTINDEGIVDI-----IEG-RHPL--------- 308
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
++ E+ VPI +K+ E ++ITGPNTGGKT ++
Sbjct: 309 -------------IDRREV-------------VPISVKLGEEFTSLMITGPNTGGKTVTL 342
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL LM+ +GL +PA+ + + +F+ + ADIGD QS+EQ+LSTFS H+ IV+I++
Sbjct: 343 KTVGLIHLMAMSGLMIPARENSVISYFNNVFADIGDEQSIEQSLSTFSSHMKNIVEIMDK 402
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K EN
Sbjct: 403 ADENSLVLFDELGAGTDPTEGAALAISILENLRKRGTKIIATTHYSELKAYALKKEGVEN 462
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I+K +G II A++ + + R
Sbjct: 463 ASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDFARENI-----SNENIRFE 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
EL ++L E+ K + AR A +L E ++ E++ + L + + ++ + +
Sbjct: 518 ELIENLQEKSIKAQEDARLAENLKLERDKEKKKYEEKLEGLQKVRDNALIDARREAKNII 577
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
AK + D +++D R + + ++E + +++ + +V +
Sbjct: 578 KEAKEEADKILKDIRQLERMGYSSDARRKLEEERKKLKDKLDSIEEKEIKTVHKGEALKN 637
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
+ G++V + S+ K+ V+ P + VLVQ G M++ NI+
Sbjct: 638 VKE-GDEVLLASINQKV-IVLSKPDNKGDVLVQAGIMKITA---NIKD------------ 680
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
LR + + S+ + ++ ++S+DLRGM EEA + +D L A
Sbjct: 681 ---LRAAKGSNSNSSSSKIKKSKKLNLNLRRVESSVDLRGMDAEEAIYTVDKYLDEAYLG 737
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ ++HG GTGV+++ ++++L+ H V KY
Sbjct: 738 GLGEVTIVHGKGTGVLRKTIMDMLKGHSHVKKY 770
>gi|317132907|ref|YP_004092221.1| MutS2 family protein [Ethanoligenens harbinense YUAN-3]
gi|315470886|gb|ADU27490.1| MutS2 family protein [Ethanoligenens harbinense YUAN-3]
Length = 796
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 253/843 (30%), Positives = 397/843 (47%), Gaps = 117/843 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAA--LAMMQSQPLDLSTIEDIAGILNSAVSGQL 59
G A +A P G SLE++++ L QT+ A L+ P ++D++ L A G
Sbjct: 28 GGARHARALTPSG-SLEDAREQLAQTADAVRLSTRFGDP-PFGGVQDVSDALQRAKIGAS 85
Query: 60 LSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
L ++ V R L + + W+ + AE + L + + L +L EEKI
Sbjct: 86 LQMGDLLRVARVLSVIRALVRWR---DGAEQETTCLDDF---FDALAPNKYL---EEKIT 136
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
I + D AS +L IR +R + + L K+ A + + ++T+R R
Sbjct: 137 AAI-LPEEEMADTASAELADIRRNIRRAGQRVREQLDKMVHSQRYAKFLQEAIVTQRGGR 195
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
+ ++A ++ +P G+ + S+SGAT F+EP VE +N L E E IL+ L
Sbjct: 196 FVIPVRAEYRSEVP-GLVHDTSASGATLFIEPMAVVEADNELKVLYVKEEKEIERILAAL 254
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
+AE++ I + ++D FARA + M P H++ D I++ +H
Sbjct: 255 SAEVSTFADVIAQDVRTAEKLDFVFARARLSFAMKAGVP------HLADDGIIDLHRARH 308
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLL P D VPIDI++ +VIT
Sbjct: 309 PLL----------------P-------------------PDQAVPIDIRLGEPFDTLVIT 333
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT ++KTLGL +LM+ +GL +P + +L +F+ +LADIGD QS+EQ+LSTFS
Sbjct: 334 GPNTGGKTVALKTLGLITLMAMSGLAVPVADDSKLSFFEQVLADIGDEQSIEQSLSTFSA 393
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
H++ I+ IL SLVL+DE+GSGTDP+EG ALA +IL++LR R TTHYA+L
Sbjct: 394 HMTNIIGILHTCGTRSLVLLDELGSGTDPTEGAALAVAILEHLRLRGAKVAATTHYAELK 453
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
+ EN + EF + TLRPTYR+L G G SNA I+ +G II RA+ L+
Sbjct: 454 LYALETPGVENGSCEFDVATLRPTYRLLIGVPGRSNAFAISARLGLYESIIVRAKALL-- 511
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
+ R ++ + L + R LE AA AE + E + EA AAHL+
Sbjct: 512 ---SNEDTRFEQVVEGLEKNRLALE-----AARTEAEALRRQAEQDREA------AAHLR 557
Query: 598 AKETQQVQQELNFAKVQIDTVV-----------QDFENQLRDASADEINSLIKESESAIA 646
+ ++EL A+VQ +V D + + +A++ +L + ++S +
Sbjct: 558 DQMENAREKELERARVQAQAMVGRARAEAQALLTDIDELRKMEAAEKAEALRELAKSTVG 617
Query: 647 AIVEAHRPDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
A ++A D + P + G++V + + D+ TV+ V VQ G
Sbjct: 618 ARLDALEKTADPVRKKQAQPYRLPRRLRSGDRVLIHDI-DQKGTVLSTADASGMVEVQAG 676
Query: 704 KMRVRVKKNNIRPIPNSK-----RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 758
++ RV ++++R + N + R A A LR
Sbjct: 677 IIKTRVPESDLRLLENERVTVQARAGGARLARTLRGTH---------------------T 715
Query: 759 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
++ +DLRG V+EA +D I A S S + +IHG GTG ++ V + L+ + V
Sbjct: 716 AAQTEIDLRGQTVQEALEAVDKFIDDARLASLSQVSIIHGKGTGALRTAVQQHLKGNRSV 775
Query: 817 AKY 819
+
Sbjct: 776 KSF 778
>gi|357050429|ref|ZP_09111627.1| MutS2 protein [Enterococcus saccharolyticus 30_1]
gi|355381082|gb|EHG28209.1| MutS2 protein [Enterococcus saccharolyticus 30_1]
Length = 787
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 247/813 (30%), Positives = 391/813 (48%), Gaps = 119/813 (14%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
IE+I + G L+ E+ V R L N + + + + DS + L E
Sbjct: 68 IENIRPQMKRIEIGADLNGLELAQVGRVLVTANELKRFFEDLS----DSEIEFERLYEWE 123
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQ 159
K L L ++ +D + D AS +L +IR +R+ E LDSL++ A+
Sbjct: 124 KQLVTLPTLSRRLKEAVDEDGRLT-DEASPELRVIRQNIRRSERTIRETLDSLVRGGNAK 182
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ ++T R R + +K ++ + G+ + SSSG T F+EPK V+ NN
Sbjct: 183 Y-----LSDTIVTMRNERYVIPVKQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVDQNN-- 234
Query: 220 VRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
RL +IAE T I L+ L+AE+A +REI + + +D A+A F + + + P
Sbjct: 235 -RLRQHQIAERTEIERILAELSAELAPYQREILHNAYVIGMMDFMNAKARFGKELQAIVP 293
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+++ +HV F + +HPL+ D E
Sbjct: 294 AINTDNHVVFKQA------RHPLI--------------------DQEKV----------- 316
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP DI + + + VVITGPNTGGKT ++KTLGL +M ++GL + ++ F
Sbjct: 317 ----VPNDIAIGEDYQAVVITGPNTGGKTITLKTLGLLQIMGQSGLPILVDEESQMGIFQ 372
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQ+LSTFS H++ IVD+L+ V SLVL DE+G+GTDP EG ALA +I
Sbjct: 373 EIFADIGDEQSIEQSLSTFSSHMTTIVDVLKKVDHTSLVLFDELGAGTDPQEGAALAIAI 432
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L L R + TTHY +L NA+ EF ++TL PTYR+L G G SNA
Sbjct: 433 LDELGARSAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFE 492
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+K +G D +II++A+++++ Q L E LE++ + + + E+
Sbjct: 493 ISKRLGLDTQIIEQAKQIMDGES------------QDLNEMIADLENRRKMTETEYLEMR 540
Query: 577 DLYREIEDEAKDL--------DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLR 627
E E K+L + R A L AK ++ Q + AK + + ++ D N QL
Sbjct: 541 HYVEEAERLQKELKQAYNFFFEEREAEL-AKARKKANQIVEEAKEESEKIISDIRNMQLS 599
Query: 628 DASADEINSLIKESE--SAIAAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGD 683
S +KE E +A + + H+ + V + ++ T + G++V V S G
Sbjct: 600 SG-----QSHVKEHELIAARTKLSDLHQEEHLQKNKVLQKAKAAKTLKVGDEVLVTSYGQ 654
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
+ T+++ G VQ G +++ + +++++P A P +E Q
Sbjct: 655 R-GTLIKKMGQSQW-QVQLGILKMTLPESDLQP---------AAPV------KEPVQRVV 697
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
+ E+S+ P N LDLRG R EEA +++D L A + ++HG GTG
Sbjct: 698 HTVRSAESSHVP------NQLDLRGKRYEEALNEVDQYLDAAILAGYPQVTIVHGKGTGA 751
Query: 802 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
+++ + E L+NH V +E +P N G A I
Sbjct: 752 LRQGITEYLKNHRSVKSFE-FAPANQGGNGATI 783
>gi|291521669|emb|CBK79962.1| MutS2 family protein [Coprococcus catus GD/7]
Length = 793
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 237/800 (29%), Positives = 378/800 (47%), Gaps = 79/800 (9%)
Query: 26 QTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR-AVNNVWKKLT 83
+TS AL +M+ L S I DI G L G + +E+ + TL A+
Sbjct: 49 ETSDALTRVMKKGSLSFSGIRDIRGSLLRLKVGSTVGMAELLNIAATLDVALRAKSYGRR 108
Query: 84 EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
EA + D DSL+ +E L N N +I CI + D AS L+ IR + K
Sbjct: 109 EADDEDQDSLEGLFAQIEPLSNLN------HEIRRCI-IDEETMADDASPTLKSIRRQIK 161
Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
E + S L + + + L+T R R C+ +KA ++ + G+ + SS+G+
Sbjct: 162 LTNERIHSQLASMVSSQNIGSKLQDNLVTMRNGRYCLPVKAEYRSQV-QGMIHDQSSTGS 220
Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
T F+EP V+ NN L + E E IL L+ KS ++ + + +D FA
Sbjct: 221 TLFIEPMAVVKLNNDLRELGSKEKEEIEHILDTLSELAGKSAVMLEQDIAVLTRLDFIFA 280
Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
+A ++ +G P+ + + I+I+ +HPLL +
Sbjct: 281 KASLSRTYNGSEPVFNENGY------IHIKKGRHPLLDKKKV------------------ 316
Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
VPID+ + + R++++TGPNTGGKT S+KT+GL +LM +AGL+
Sbjct: 317 -----------------VPIDLILGKDYRMLIVTGPNTGGKTVSLKTVGLFTLMGQAGLH 359
Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
+PA +H L FD + ADIGD QS+EQ+LSTFS H++ IV IL ++LVL DE+ +G
Sbjct: 360 IPAFDHSELAVFDDVFADIGDEQSIEQSLSTFSSHMTNIVRILNAADAKTLVLFDELCAG 419
Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
TDP+EG ALA +IL+ L +R + TTHY++L + NA EF + TL PTYR
Sbjct: 420 TDPTEGAALAIAILKTLLNRHVTTMATTHYSELKVFALTTEQVCNACCEFDVATLSPTYR 479
Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES 563
+L G G SNA I+ +G II+ A+K + + Q+ EL L R +E
Sbjct: 480 LLIGIPGKSNAFAISGKLGLPAHIIEEAKKNI-----DVQEQNFEELIADLETSRATIEK 534
Query: 564 QARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE 623
+ ++ A++ L + +E++ ++ ++ + + ++ Q L AK D ++
Sbjct: 535 EQEELSAYKAQVESLKKRLEEKHDNITKQKERILNEANEKAQNILQDAKDYADHTIRTM- 593
Query: 624 NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSL 681
N+L + ++ +L +E + +++ ++ F G+ VHV+SL
Sbjct: 594 NKLSKSGGVDMKALEQERSRVRDKLNQSNNRKKAAPTAQKAKVYAASDFKQGDSVHVRSL 653
Query: 682 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 741
D TVV P + +Q G ++ R+ +++ PI + N P + K
Sbjct: 654 -DLKGTVVSQPNSKGELSIQMGILKSRIHFSDLEPID----EEVIN-TPMINK------- 700
Query: 742 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 799
GS + + V TS N L G V+EA LD L A + +IHG GT
Sbjct: 701 --TGSGKIKMNKAAHVNTSIN---LIGETVDEAMIDLDKYLDDAYLAHIPNVTIIHGRGT 755
Query: 800 GVVKERVLEILRNHPRVAKY 819
G +++ V E LR V Y
Sbjct: 756 GALRKAVHEKLRKSKYVKSY 775
>gi|257416014|ref|ZP_05593008.1| MutS 2 protein [Enterococcus faecalis ARO1/DG]
gi|300860265|ref|ZP_07106352.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TUSoD Ef11]
gi|384513156|ref|YP_005708249.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1RF]
gi|422733668|ref|ZP_16789970.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0645]
gi|422738643|ref|ZP_16793838.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2141]
gi|428766910|ref|YP_007153021.1| DNA mismatch repair protein, mutS2 family [Enterococcus faecalis
str. Symbioflor 1]
gi|430360426|ref|ZP_19426273.1| MutS 2 protein [Enterococcus faecalis OG1X]
gi|430368259|ref|ZP_19428131.1| MutS 2 protein [Enterococcus faecalis M7]
gi|257157842|gb|EEU87802.1| MutS 2 protein [Enterococcus faecalis ARO1/DG]
gi|295112922|emb|CBL31559.1| MutS2 family protein [Enterococcus sp. 7L76]
gi|300849304|gb|EFK77054.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TUSoD Ef11]
gi|315145717|gb|EFT89733.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2141]
gi|315160196|gb|EFU04213.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0645]
gi|327535045|gb|AEA93879.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1RF]
gi|427185083|emb|CCO72307.1| DNA mismatch repair protein, mutS2 family [Enterococcus faecalis
str. Symbioflor 1]
gi|429512902|gb|ELA02497.1| MutS 2 protein [Enterococcus faecalis OG1X]
gi|429516421|gb|ELA05913.1| MutS 2 protein [Enterococcus faecalis M7]
Length = 788
Score = 276 bits (706), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 251/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|257085338|ref|ZP_05579699.1| MutS 2 protein [Enterococcus faecalis Fly1]
gi|256993368|gb|EEU80670.1| MutS 2 protein [Enterococcus faecalis Fly1]
Length = 788
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 253/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKHAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ K PR+ + SA SS+ V T LDLRG R E
Sbjct: 684 DMTPVAPQKEAK-----PRVTTVR------SAESSH--------VST---QLDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|406665755|ref|ZP_11073526.1| MutS2 protein [Bacillus isronensis B3W22]
gi|405386274|gb|EKB45702.1| MutS2 protein [Bacillus isronensis B3W22]
Length = 788
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 238/830 (28%), Positives = 393/830 (47%), Gaps = 103/830 (12%)
Query: 22 KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+LL + LA+++ + + + I D+ + G +LSP E+ + T+RA + + +
Sbjct: 46 ELLEEMDEGLAILRVKGNVPMGGIFDVRPHARRSQIGGMLSPMELMEIASTIRA-SRILR 104
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR- 139
E +++ ++ +E + LT L+ +I CID +LD AS L IR
Sbjct: 105 NFIE--DIESENTIEIPHFIERKEQMPVLTALQHEINDCIDDNG-TVLDSASPALRSIRQ 161
Query: 140 ---AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+E + + L+SL + A + I IT R R + +K ++ GI
Sbjct: 162 SLRSEESKVRQKLESLTRGSNATKMLSDAI----ITIRNDRFVIPVKQEYRSHY-GGIVH 216
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SG T F+EP ++ NN RL E AE ILS LT ++ + EI L+ +
Sbjct: 217 DQSASGQTLFIEPDAVIQSNNEVQRLKVKEKAEIERILSELTLKVQEVGHEIFVLVQLLG 276
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
E+D+ A+ + Q P ++ + + + +HPLL
Sbjct: 277 EMDVILAKGKYGQANKCTMPKMNKEGYTRLVRA------RHPLL---------------- 314
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P++ V N+ I+ + +VITGPNTGGKT ++KT+GL ++
Sbjct: 315 PIEDAVANT-------------------IEFGRDVTAIVITGPNTGGKTVTLKTVGLCTI 355
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++ GL +PA + L F+ I ADIGD QS+EQ+LSTFS H+ IVDIL + +SL+L
Sbjct: 356 MAQCGLPVPALDGSELAVFEQIFADIGDEQSIEQSLSTFSSHMVNIVDILSKFNEKSLIL 415
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA +IL DR + T+HY +L NA+ EF +E
Sbjct: 416 FDELGAGTDPQEGAALAIAILDETVDRGARVMATSHYPELKAYGYNRPSVVNASVEFDIE 475
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TL PTYR+L G G SNA I+K +G +I A+ R H + SL E
Sbjct: 476 TLSPTYRLLIGVPGRSNAFEISKRLGLSSNVIDHAKSFTGTDR-----HEVESMIASLEE 530
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
R + E +A A L + + E+E+ + D + +L+ K + ++ ++ AK + +
Sbjct: 531 SRLRSEREADEAHLLLEDAQKIRAELEERLRIYDEKKENLEKKAKDKARKIVDDAKKEAE 590
Query: 617 TVVQDFENQLRDASADEINSLIKESESA-IAAIVEAHRPDDDFSVSETNTSSF----TPQ 671
T++ + +A+ +KE E + ++ P D+ V + ++ Q
Sbjct: 591 TIIAELRKMKENAALS-----VKEHELIDVKKRLDNAAPIDNNKVLQKAVAARERKQNLQ 645
Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
G++V V S G K T+++ G++ +VQ G +++++ ++++ + K + A P
Sbjct: 646 VGDEVKVLSYGQK-GTLLQKAGNE--WVVQIGILKMKLPESDLEYVKPEKEQ-ATRPMMN 701
Query: 732 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWES 787
++ R K LDLRG R EEA LD AL
Sbjct: 702 VKN---------------------RNSVVKLELDLRGERYEEALIRTEKYLDDALLANYP 740
Query: 788 RSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
R + +IHG GTG +++ + L+NH RV +Y + +G TV +K
Sbjct: 741 R--VSIIHGKGTGALRQGIQNFLKNHKRVKSYRYGEAGEGGFGVTVVELK 788
>gi|260887326|ref|ZP_05898589.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
gi|330838921|ref|YP_004413501.1| MutS2 family protein [Selenomonas sputigena ATCC 35185]
gi|260862962|gb|EEX77462.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
gi|329746685|gb|AEC00042.1| MutS2 family protein [Selenomonas sputigena ATCC 35185]
Length = 791
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 238/829 (28%), Positives = 397/829 (47%), Gaps = 104/829 (12%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+A +P G E ++LL +T A+ + + + DI L A G +L +
Sbjct: 32 RAVLPSG-DFAEVEELLRETEEAVRLSAFSSPPMGGVFDIRESLAKAERGAVLDLGDFTD 90
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLI 126
+ T+RA+ V K+ + E+D PL+ E K L +LE ++ +D +
Sbjct: 91 LLSTMRAMRAV-KRFFKEVEMD-------LPLIKEQAKGIEILGQLERRLENSVD-EHGN 141
Query: 127 ILDRASEDLELIRAERKRNM----ENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+LD AS +L IR E + E ++++L + Q F +IT+R R + I
Sbjct: 142 LLDDASVELSRIRRELRSGRRRAKEQMEAILHRTEYQKF----FQDAIITQRAERNVIPI 197
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ P GI + S+SGAT F+EP V+ NN +L+ +E E IL LL+ E+
Sbjct: 198 KQEYRQSFP-GIVHDQSASGATLFIEPMALVDLNNDLKQLALAEKTEVQRILRLLSQEVG 256
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
K+ ++ + +D FARA A M P ++ + ++ +HPL+
Sbjct: 257 KNGSVLEGNCAILASLDFIFARAKLAADMQAKRPAINREGRTKLVAA------RHPLIDA 310
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
+ + VPIDI + R+++ITGPNTG
Sbjct: 311 AKV-----------------------------------VPIDIALGEAYRMLLITGPNTG 335
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT S+KT+GL +LM ++G Y+PA + + + IGD QS+EQ+LSTFS H+S +
Sbjct: 336 GKTVSLKTIGLFALMVQSGCYIPAAAGSEISVYTNVYTVIGDEQSIEQSLSTFSAHMSHL 395
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V +LE V L+L+DEIG+GTDP EG ALA +IL+ R +VTTHY++L
Sbjct: 396 VKLLECVEGTDLLLLDEIGAGTDPEEGAALAMAILEQFLARGSSTIVTTHYSELKTFAFT 455
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
ENA EF +ETLRPTYR+L G G SNA I++ +G I RAQ+ ++ +
Sbjct: 456 REGIENACVEFDVETLRPTYRLLTGMPGASNAFAISRRLGLSEAAILRAQQFIKADHAQF 515
Query: 543 QQHRKSELYQSLMEERRK---LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ + LM E+R +E Q R A L + L EI ++ + + ++A A
Sbjct: 516 EKVVNQLESEKLMYEQRNADIMERQQRV-AKLEEKTQALKDEIREKKEQMLKKARQESAN 574
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR----PD 655
++ ++E + +++ + Q D + ++E+ + E R P
Sbjct: 575 LVRRTRRE-------AEEIIKSLKAQFDDLGIESRRRAMQEAREKLQEAAERSRTGLLPG 627
Query: 656 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
+ + + G+ V+V+ L D+ ATV+++ G + + VQ G ++ VK + R
Sbjct: 628 KAYK-EKIDMQKLA--VGDVVYVRKL-DQKATVLKIQGAN--IEVQLGSLKTYVKAGDCR 681
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN---SLDLRGMRVE 772
+ ++++ PA + GS G+ G +Q + N +D+RG+ V+
Sbjct: 682 FVERARKE---QPAAK----------GSGGTKG----AGALLQKTANLHREIDVRGLMVD 724
Query: 773 EASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
EA L L A + +IHG GTG +++ + + L++H VA++
Sbjct: 725 EAEQVLGKFLDDAVIGGLGQVLIIHGKGTGALRKGIHDYLKHHKSVARF 773
>gi|257086832|ref|ZP_05581193.1| MutS 2 protein [Enterococcus faecalis D6]
gi|422722610|ref|ZP_16779160.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2137]
gi|424673309|ref|ZP_18110252.1| MutS2 family protein [Enterococcus faecalis 599]
gi|256994862|gb|EEU82164.1| MutS 2 protein [Enterococcus faecalis D6]
gi|315027355|gb|EFT39287.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX2137]
gi|402353119|gb|EJU87955.1| MutS2 family protein [Enterococcus faecalis 599]
Length = 788
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 251/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNVF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|256618984|ref|ZP_05475830.1| MutS 2 protein [Enterococcus faecalis ATCC 4200]
gi|256598511|gb|EEU17687.1| MutS 2 protein [Enterococcus faecalis ATCC 4200]
Length = 788
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 251/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDTLVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|424759532|ref|ZP_18187194.1| MutS2 family protein [Enterococcus faecalis R508]
gi|402404409|gb|EJV37027.1| MutS2 family protein [Enterococcus faecalis R508]
Length = 788
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 251/844 (29%), Positives = 401/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKCLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKKAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|422728993|ref|ZP_16785399.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0012]
gi|315150623|gb|EFT94639.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0012]
Length = 788
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 252/844 (29%), Positives = 401/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L +
Sbjct: 44 QAWLNETQDGLKVHRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTLELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEVSQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
NP K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----NPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|229918290|ref|YP_002886936.1| MutS2 family protein [Exiguobacterium sp. AT1b]
gi|229469719|gb|ACQ71491.1| MutS2 family protein [Exiguobacterium sp. AT1b]
Length = 784
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 249/804 (30%), Positives = 374/804 (46%), Gaps = 128/804 (15%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQR 95
L L + D+ + A G +LS SE+ AV + R V N +KL E D + + R
Sbjct: 62 LPLGGLTDVRAEVKRAAIGSVLSTSELLAVAAVMYGGRQVKNFIEKLHE----DNEEI-R 116
Query: 96 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LD 150
L E L E+E+ I ID + + D AS L +R + R+ E +D
Sbjct: 117 IPRLDEYADKLTKLIEVEQAIRHAIDDQG-TVQDSASPQLRGLRTQL-RSFEGSVRSRID 174
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
++L+ A + A ++T R R V +K ++ GI + S+SG T F+EP+
Sbjct: 175 NILRNNAKMLSDA------IVTIRNDRYVVPVKQEYRQAF-GGIVHDQSASGQTLFIEPQ 227
Query: 211 GAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
V NN EVRL E AE ILS L+ E+ I +D + E+D FA+ +
Sbjct: 228 AIVSINNEIQEVRLK--ERAEIERILSALSNEVGGVHDAIMTNLDVLAELDFIFAKVAYG 285
Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
Q M P L+ + I ++ +HP + P
Sbjct: 286 QEMKATEPKLND------NREIKLKQARHPFI----------------P----------- 312
Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
D VPI +++ + +VITGPNTGGKT ++KT+GL LM ++GLY+PA+
Sbjct: 313 --------KDEVVPITVELGEDYTSLVITGPNTGGKTVTLKTIGLLQLMVQSGLYVPAEF 364
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
L FD + ADIGD QS+EQ+LSTFS H++ IV +L+ + SLVL DE+G+GTDP E
Sbjct: 365 GTELSVFDAVYADIGDEQSIEQSLSTFSSHMTNIVGMLDKIDFMSLVLFDELGAGTDPQE 424
Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
G ALA +IL ++ R TTHY++L NA+ EF +E+L PTYR+L G
Sbjct: 425 GAALAIAILDEVKRRGARVAATTHYSELKAYAYNREGVMNASMEFDIESLSPTYRLLIGV 484
Query: 509 TGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEE 557
G SNA I++ +G ++I +A + ++ L +Q R +L Q L+ +
Sbjct: 485 PGRSNAFEISRRLGLSEQVIDKARSHVGSDAESVESMINELEAAKQ--RAEQLEQELIVK 542
Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
R E + + E E E +L R A K +Q AK Q +
Sbjct: 543 RHDFEEEQAEFEAKMT-------EFERERDNLYRAAEAKAEKAVEQ-------AKRQANE 588
Query: 618 VVQDFENQLRD---ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
V+ D +LR+ EI + KE ESA + E V + T GE
Sbjct: 589 VI-DRLKKLREQGIVKEHEIIAAKKELESAKPTLQEKKIQ----KVKQKAHQKRTFSKGE 643
Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 734
+V V + K V ++ +D+ VQ G M+V VK ++++ I SK K+ + L++
Sbjct: 644 EVKVTTFNQKGYIVKQI--NDNEYNVQVGIMKVNVKADDLQKIGPSKEKSLQSKGSSLKR 701
Query: 735 QQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLF 792
Q ++K+ LDLRG+RVEE +LD I A +
Sbjct: 702 Q----------------------SSTKSELDLRGVRVEEGLMRLDKYIDEALVSGYDNVR 739
Query: 793 VIHGMGTGVVKERVLEILRNHPRV 816
+IHG+GTG +++ E L+ H V
Sbjct: 740 IIHGLGTGAMRQATQEFLKGHRHV 763
>gi|210623508|ref|ZP_03293853.1| hypothetical protein CLOHIR_01803 [Clostridium hiranonis DSM 13275]
gi|210153566|gb|EEA84572.1| hypothetical protein CLOHIR_01803 [Clostridium hiranonis DSM 13275]
Length = 793
Score = 276 bits (705), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 243/812 (29%), Positives = 389/812 (47%), Gaps = 103/812 (12%)
Query: 17 LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EE Q L +T+ A +++ + ++L I D+ + A G L P + V TLRA
Sbjct: 40 FEEVQYRLQETTEAQSILIKRGHVNLGGIHDVLDKVKRAEIGASLDPGSLLMVADTLRAA 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASED 134
+ L+ + DG+ P+++ L ++ E+E+ + I ++ I D AS
Sbjct: 100 ----RVLSNSLSGDGEEEDFNYPIIQSLATSLYIHREIEDAVYNAIVSEIEI-ADSASHT 154
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR + + +++ S L + + + +I+ R R V +KA ++ ++ GI
Sbjct: 155 LRDIRRKIVQKNQSIRSKLNTIISSATYQKYLQDSIISMRGDRFVVPVKAEYRSVVA-GI 213
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SSSGAT F+EP VE NN +L E E IL+ L+ I + REI +
Sbjct: 214 VHDQSSSGATLFIEPMSIVEMNNELRKLKLDEQEEIERILAELSKMIGEIAREIISNQEI 273
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ +ID FA+ + M G+ P L+ D S I+ +HPLL
Sbjct: 274 LEKIDFIFAKGKLSLEMKGIDPKLNK------DKSFVIKNGRHPLL-------------- 313
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
+P K + N+ I + E +VITGPNTGGKT ++KT+GL
Sbjct: 314 -DP-KKVIANT-------------------IYLGDEFHTLVITGPNTGGKTVTIKTVGLF 352
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM+++GL++PA + +D I ADIGD QS+EQ+LSTFS H++RIV IL+ V+ +SL
Sbjct: 353 ALMTQSGLHIPADFGSSMCVYDNIFADIGDEQSIEQSLSTFSSHMTRIVSILDKVTEDSL 412
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
V+ DE+G+GTDP EG ALA +IL+ +R + TTHY++L ENAA EF
Sbjct: 413 VIFDELGAGTDPVEGAALAIAILEDVRMAGAKCIATTHYSELKNYALTKKGVENAAVEFD 472
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
+ETL PTYR+L G G SNA I+K +G +I RA++ + E + +L Q++
Sbjct: 473 VETLSPTYRLLIGVPGKSNAFEISKKLGLSEFVINRAKEFINTENIELE-----DLLQNV 527
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE----LNF 610
+ R K E A L EI + R+ E E + + + K K ++ + E
Sbjct: 528 EKNRIKAEEDRAEAEKLKTEI-QMIRDAEAEKLE---KLTNQKEKMMERARSEAFSITRQ 583
Query: 611 AKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
AK ++D +++ ++ ++ E N I++ + D S+ T S P
Sbjct: 584 AKEEVDEIIKRLRELEQERASKEKNRQIEQLRKELT--------DSMGSLQPTVKSMIVP 635
Query: 671 ----------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
+ GE V V +L + TVV +VQ G M++ + +++ I N
Sbjct: 636 KVASKEIKNLKVGEDVKVITLNQE-GTVVSADDKKKEAVVQIGIMKMTLPYKSLQRIKNQ 694
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
++ + K + R G +DLRGM +EEA+ +L+
Sbjct: 695 QQATVTKKTRSVIKAKSGRVKG--------------------EVDLRGMNLEEATLELEK 734
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEIL 810
L A + VIHG+GTGV+K + ++L
Sbjct: 735 YLDDATVAGLEQVTVIHGVGTGVLKTGLQDVL 766
>gi|229545911|ref|ZP_04434636.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX1322]
gi|256853039|ref|ZP_05558409.1| MutS2 protein [Enterococcus faecalis T8]
gi|307291392|ref|ZP_07571276.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0411]
gi|229308979|gb|EEN74966.1| MutS family DNA mismatch repair protein [Enterococcus faecalis
TX1322]
gi|256711498|gb|EEU26536.1| MutS2 protein [Enterococcus faecalis T8]
gi|306497623|gb|EFM67156.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0411]
Length = 788
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 251/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVHRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|339007645|ref|ZP_08640219.1| protein MutS2 [Brevibacillus laterosporus LMG 15441]
gi|338774848|gb|EGP34377.1| protein MutS2 [Brevibacillus laterosporus LMG 15441]
Length = 785
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 237/819 (28%), Positives = 391/819 (47%), Gaps = 98/819 (11%)
Query: 12 PFGK--SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
PF ++ +Q+ + S L + S PL I +I G + A +L+P E+ +
Sbjct: 36 PFNHIDAVRHAQRQTEEASTVLRVKGSVPL--GGIRNIRGPIQRARLNSILAPLELLDIA 93
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
TL A + + +T+ +E S L L+ L +LE +I CID ++ D
Sbjct: 94 TTLHAGRRLKQFITDISEE-----HELSILQSLVDRIEGLRDLETEIKRCIDDNGEVV-D 147
Query: 130 RASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
AS +L IR E + R E LD + + + Q I +T R R + +K
Sbjct: 148 SASLELRQIRQEIRSSEARIREKLDQMTRSSSTQKMLMENI----VTIRGDRFVIPVKQE 203
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM--EVRLSNSEIAEETAILSLLTAEIAK 243
++ GI + S+SGAT F+EP+ V NN E RL E IL LT +A
Sbjct: 204 YRSHF-GGIVHDQSASGATLFIEPEVIVSMNNKLREARLKEEHEVER--ILYTLTVLVAD 260
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+ + + E+D FA+A A M + P L+ + ++ +HPL+
Sbjct: 261 HVEMLLENLSVLAELDFIFAKAQLAYSMKAISPKLNEEGYILLKKG------RHPLI--- 311
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+P VP+D+++ +V+TGPNTGG
Sbjct: 312 ------------DP--------------------KVVVPLDVELGKGYTGIVVTGPNTGG 339
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KTLGL SLM+ AGL++PA+ + F I ADIGD QS+EQ+LSTFS H++ I+
Sbjct: 340 KTVSIKTLGLLSLMTMAGLHIPAQEETEMAVFSSIFADIGDEQSIEQSLSTFSSHLTNII 399
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
IL+ + +SLVL DE+G+GTDP+EG ALA SIL ++ + V TTHY++L
Sbjct: 400 RILDQMDEKSLVLFDELGAGTDPTEGAALAMSILDHVLAKGARLVATTHYSELKAYAYDT 459
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
NA+ EF ++TLRPTYR+L G G SNA IA +G + +II +A++ V ++
Sbjct: 460 PEVVNASVEFDVQTLRPTYRLLVGVPGRSNAFAIASRLGLNEQIIDKARRSV-----SKE 514
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
+++ ++ SL ++ E + A ++ + +L +++E+E + L K ++
Sbjct: 515 ENQVEKMIASLESNKKTAEKEREDAENIRKQAEELRQQLEEERRHFAEAKNRLLEKAEEE 574
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASAD-EINSLIKESESAIAAIVEAHRPDDDFSVSE 662
+ + A + + ++++ Q+R D + + LI + A++E +
Sbjct: 575 ARVAVQLASEEAEVIIREL-RQMRKEGVDFKEHRLIDAKKRLGNAVLELEKEKVKKPAKA 633
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ + G++V V S G K + +V + LVQ G ++++VKK+++ +
Sbjct: 634 VRATQI--KIGDEVMVDSFGQKGTVLDKVSSTE--YLVQLGIIKMKVKKDDMHVV----- 684
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
K + P ++ R++ S K LDLRG VE++ ++D L
Sbjct: 685 KESVQPKKPVQYTTIKREANSV----------------KLDLDLRGYNVEDSIQEIDRYL 728
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + +IHG GTGV+++ V E LR H V +
Sbjct: 729 DDAVLSGFHKVSIIHGNGTGVLRKGVHEFLRRHRSVKSF 767
>gi|312900671|ref|ZP_07759968.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0470]
gi|311292152|gb|EFQ70708.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0470]
Length = 788
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 253/850 (29%), Positives = 403/850 (47%), Gaps = 145/850 (17%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYGKMR 706
+ + + EQ +K+ GD++ +V G T+L VQ G ++
Sbjct: 626 TKLA-----KNKVLKKAKEQKRLKA-GDEV--IVNTYGQRGTLLKDNGKGQWQVQLGILK 677
Query: 707 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 766
+ V + ++ P+ AP Q+E + + S E + G + LDL
Sbjct: 678 MNVSEEDMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDL 715
Query: 767 RGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 824
RG R EEA ++D I A + ++HG GTG ++ + E L+NH V YE +P
Sbjct: 716 RGKRYEEALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-AP 774
Query: 825 MNYGCTVAYI 834
N G A +
Sbjct: 775 QNQGGNGATV 784
>gi|327475223|gb|AEA77206.1| MutS2 [Exiguobacterium sp. EPVM]
Length = 784
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 246/807 (30%), Positives = 381/807 (47%), Gaps = 134/807 (16%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQR 95
L L + D+ G + A G +LS SE+ AV + R V N ++KL E D + L R
Sbjct: 62 LPLGGLTDVRGEVKRAAIGSVLSTSELLAVAAVMYSGRQVKNFFEKLHE----DNEDL-R 116
Query: 96 YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LD 150
L E + L E+E+ I ID + + D AS+ L +R + R+ E +D
Sbjct: 117 IPRLDEYAERLTKLIEVEQAIRHAIDDQG-TVQDSASDRLRGLRTQL-RSFEGSVRSRID 174
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
++L+ A + A ++T R R V +K ++ GI + S+SG T F+EP+
Sbjct: 175 NILRNNAKMLSDA------IVTIRNDRYVVPVKMEYRQAFG-GIVHDQSASGQTLFIEPQ 227
Query: 211 GAVEFNN--MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
V NN EVRL E AE ILS L+ + + +D + +D FA+ +
Sbjct: 228 AIVSINNEIQEVRLK--ERAEIDRILSELSNLVGGVSDSVVINLDVLATLDFVFAKVAYG 285
Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
+ P L+ + + +HP + P
Sbjct: 286 HELKATEPKLNDAREIKLKQA------RHPFI----------------P----------- 312
Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
D VPI +++ +VITGPNTGGKT ++KTLGL LM ++GLY+PA+
Sbjct: 313 --------QDEVVPITVELGEAFTSLVITGPNTGGKTVTLKTLGLLQLMVQSGLYVPAEF 364
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
L FD I ADIGD QS+EQ+LSTFS H++ IV +L+ + SLVL DE+G+GTDP E
Sbjct: 365 GTELSVFDAIYADIGDEQSIEQSLSTFSSHMTNIVSMLDKIDFMSLVLFDELGAGTDPQE 424
Query: 449 GVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
G ALA +IL ++ R TTHY++L NA+ EF +E+L PTYR+L G
Sbjct: 425 GAALAIAILDEVKRRGARVAATTHYSELKAYAYNREGVMNASMEFDIESLSPTYRLLIGV 484
Query: 509 TGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEE 557
G SNA I++ +G ++I +A + ++ L +Q R +L + L+ +
Sbjct: 485 PGRSNAFEISRRLGLSEQVIDKARSHVGTDAESVESMINELEAAKQ--RAEQLEKELIVK 542
Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
R LE + A+ A++ + RE D +A+ + V+Q AK Q +
Sbjct: 543 RHDLEEE---QAAFEAKMTEFERE-------RDTMYGEAEARAEKAVEQ----AKRQANE 588
Query: 618 VVQDFENQLRDASADEINSLIKESESAIAAI--VEAHRPD--DDFSVSETNTSSFTPQF- 672
V+ D +LR+ ++KE E IAA +E+ +P D + F
Sbjct: 589 VI-DRLKKLRE------EGIVKEHE-IIAAKKQLESAKPTLRDKKIQKVKQKAQQKRTFS 640
Query: 673 -GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
GE+V V + K V ++ +D+ VQ G M+V VK ++++ I SK ++ +
Sbjct: 641 KGEEVKVTTFNQKGYIVKQL--NDNEYNVQVGIMKVNVKADDLQKIGPSKEQSLQSKGSS 698
Query: 732 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRS 789
L++Q ++K+ LDLRG+RVEE +LD I A
Sbjct: 699 LKRQ----------------------SSTKSELDLRGVRVEEGLTRLDKYIDEALVSGYD 736
Query: 790 VLFVIHGMGTGVVKERVLEILRNHPRV 816
+ +IHG+GTG +++ E L+ H V
Sbjct: 737 NVRIIHGLGTGAMRQATQEYLKGHRHV 763
>gi|167044223|gb|ABZ08904.1| putative Smr domain protein [uncultured marine microorganism
HF4000_APKG5H11]
Length = 827
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 243/845 (28%), Positives = 402/845 (47%), Gaps = 99/845 (11%)
Query: 8 KAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+A P LE + + + A + Q L+ ED +L A+ G LL E+
Sbjct: 65 RALTPTRDLLEIATRQQETSEAKQYLEQGGGLEFGPEEDFRELLQRALLGGLLRGEELFL 124
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYS--PLL-ELLKNCNFLTELEEKIGFCIDCKL 124
+R LRA A D L R+ PLL + +N L +LE I I
Sbjct: 125 IRELLRA-----------ARYDRTELGRHEEIPLLTSISENIPELGDLERAISGAI-SPA 172
Query: 125 LIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
+LD AS L +R E + L+ ++++ ++ +A + +PLIT+R RM + IKA
Sbjct: 173 GEVLDNASPVLHNLRREARNAQNRLNEIMERNLRRLQRAELVQEPLITQRNGRMVLLIKA 232
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA---ILSLLTAEI 241
+Y +P GI +VS SGAT F+EP A++ N R + +AEE IL L+ +
Sbjct: 233 EMRYRVP-GIVHDVSDSGATVFVEPMPAIDMGN---RWREARLAEEREVERILRQLSGMV 288
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
S ++ +D + +DL A+A + ++ V P +S Q D + + +HPLL
Sbjct: 289 GLSGEDLLLTLDLIARLDLDMAKARHSAAINAVPPWVSDQE--VADRHLKLVRARHPLLT 346
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
G+ VP+ + ++ + V++ITGPN
Sbjct: 347 GTV------------------------------------VPVSVDLDRDQGVLLITGPNA 370
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT+GL ++M++AGL++PA+ P FD + ADIGD QS++Q++STFS HIS
Sbjct: 371 GGKTVTLKTVGLLAMMAQAGLHVPAEE-AHFPRFDGVYADIGDQQSIQQSMSTFSSHISN 429
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
+ I+ + SLVL+DE+G+ TDP EG ALA+++L+Y + V TTH+ ++
Sbjct: 430 LKGIMSRATVHSLVLVDELGTSTDPEEGSALASAVLRYFQKIGSFVVGTTHHRGVARFVQ 489
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
NA+ + TL PTY + G G S AL IA +G +++I A+ + +
Sbjct: 490 DQPGMVNASVDLDPTTLEPTYHLTLGLPGRSYALTIAARLGVPQEVIDDARSGISPV--- 546
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
+ EL Q L +ERR +E A + +E + RE++ + D++ A+L +
Sbjct: 547 --EQATEELLQELQQERRVVEELREEAETARSEAVRRQRELDVQLADVEAAKANLVEESR 604
Query: 602 QQVQQELNFAKVQIDTVVQDFE----NQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
Q++Q+ ++ ++ + E Q +A A I+E +++ A + E R +
Sbjct: 605 QELQRRISGILDRLSKAERSLEAYELRQDAEARARAETESIQEIQASRAEVREVQRQLES 664
Query: 658 FSVSETNTSSFTPQF----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
+ S Q G++V+++ + + V+ D V V G MR ++
Sbjct: 665 AAWSPIEVERVPWQQILKEGDRVYIRGIAQPV-EVISAADSQDRVEVLLGTMRAKI---- 719
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
P+ +R+ +PA A + PR + S LDLRG+RV+E
Sbjct: 720 --PVYQLERQAEGHPA--------------AAKQGVYLNRAPR-KPSNADLDLRGLRVDE 762
Query: 774 ASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ-ESPMNYGCT 830
A ++D AL A + + + +IHG GTG +++ + E L HP V + E P G T
Sbjct: 763 ALSRVDEALNDAALDGAASVRIIHGKGTGALRQAIREYLGGHPLVISAQNGEGPGGDGIT 822
Query: 831 VAYIK 835
VA ++
Sbjct: 823 VAELE 827
>gi|168211671|ref|ZP_02637296.1| MutS2 family protein [Clostridium perfringens B str. ATCC 3626]
gi|170710370|gb|EDT22552.1| MutS2 family protein [Clostridium perfringens B str. ATCC 3626]
Length = 786
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 225/719 (31%), Positives = 352/719 (48%), Gaps = 87/719 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNYIVRSNAQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+A + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSALVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLIDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVR 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 720
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|297617881|ref|YP_003703040.1| MutS2 family protein [Syntrophothermus lipocalidus DSM 12680]
gi|297145718|gb|ADI02475.1| MutS2 family protein [Syntrophothermus lipocalidus DSM 12680]
Length = 779
Score = 275 bits (704), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 256/856 (29%), Positives = 410/856 (47%), Gaps = 124/856 (14%)
Query: 7 QKAQIPFG--KSLE-------ESQKLLNQ-TSAALAMMQSQPLD-LSTIEDIAGILNSAV 55
QKA P G K+LE E+ + Q T AL +++ + L+ ++DI +
Sbjct: 20 QKACSPMGAEKALELQPVYDLETASMRQQETGEALKVLRLRDTGFLTGVKDIRQHMRRVR 79
Query: 56 SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE-LEE 114
SG LS E+ V +RA + + + + E R P L L F+ E +E
Sbjct: 80 SGVPLSTGELLDVGALVRA-SRLARDMVEG---------RECPGLCGLTGDLFVDEGIER 129
Query: 115 KIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
I ID + + D AS +L+ IR + R E L ++ Q F + +
Sbjct: 130 AIRESID-EGGEVRDTASPELKAIRNRIATAKNRVREYLQEFVRSSHYQKF----LQDAI 184
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
IT+R+ R V +KA ++ + GI + S+SGAT F+EP+ V NN RL +E E
Sbjct: 185 ITERQGRYVVPVKAEYRSEV-KGIIHDESASGATVFVEPEAVVHVNNDIRRLEMAENREI 243
Query: 231 TAIL----SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
IL SLL +++ ER+++ L D +DL A+ A M+ V P L+ Q
Sbjct: 244 EKILRRLTSLLEPVVSELERDLEILTD----LDLVLAKGRLALEMNAVAPRLNGQGVFVL 299
Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
+ +HPLL KG VP+D++
Sbjct: 300 RRA------RHPLL--------------------------------GKG----AVPVDLE 317
Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
+ ++VITGPNTGGKT ++KT+GL +LM+ +GL++PA + D + ADIGD Q
Sbjct: 318 LGKGFDILVITGPNTGGKTVTLKTVGLLTLMAMSGLFVPAAEGTEIALVDAVYADIGDEQ 377
Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
S+EQ+LSTFS H++ I+DIL+ + +SLVL+DE+G+GTDP EG AL +IL L +
Sbjct: 378 SIEQSLSTFSSHMTNIIDILKRATSQSLVLLDELGAGTDPVEGAALGRAILGELLAKGVK 437
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
AVVTTH ++L ++ + ENA EF TL+PTYR+ G G SNAL IA+ +G D +
Sbjct: 438 AVVTTHQSELKVFAFQEAKVENACVEFDPITLQPTYRLSIGIPGHSNALEIAERLGLDHR 497
Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
I+++A++ V P+ +Q + + E RR+LES L + + R +++E
Sbjct: 498 IVEKARQFV----PQSEQD-LGRIINKVQEHRRRLESDIYEVEELRRRMEEERRALQEEK 552
Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
+ L R + K ++ + L K + DTV+ + + L++ E E E A
Sbjct: 553 EKLRREREEIIRKTREEAESYLRKVKGEADTVLDEVKRSLKER---ETPPKWHELEKARH 609
Query: 647 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
+ S+ + P G V ++S+G + ++E P D D VLVQ G ++
Sbjct: 610 RVRGLRTERQVGSLQAPEGAELNP--GAYVEIRSIGRR-GYILEGPNDKDEVLVQVGILK 666
Query: 707 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 766
+ V ++++ P +++ R+ A + + + LDL
Sbjct: 667 LTVPRDDV----------VLTTPP---EEEMARRKSHA--------FLEKAKRISPELDL 705
Query: 767 RGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE- 820
RG+ ++A ++ D LA E + +IHG GTG +++ V E L PRV +
Sbjct: 706 RGLTADDAVFEVERYIEDAYLAGLEK---VRIIHGKGTGALRQAVREWLAQCPRVTSFRD 762
Query: 821 -QESPMNYGCTVAYIK 835
+ +G TVA+ +
Sbjct: 763 GEREEGGHGVTVAFFR 778
>gi|390566333|ref|ZP_10246744.1| MutS2 protein [Nitrolancetus hollandicus Lb]
gi|390170419|emb|CCF86090.1| MutS2 protein [Nitrolancetus hollandicus Lb]
Length = 796
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 297/565 (52%), Gaps = 56/565 (9%)
Query: 3 HAVVQKAQIPFGKSLEESQ--KLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQL 59
++V ++ + G S + Q LL+ T A+ ++ + P + + DI +L+ AV G L
Sbjct: 24 YSVARERAVSIGPSGDPDQVAYLLSITREAVDLLNTNPGFSVGGVRDIRPVLDRAVRGAL 83
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
L P+E+ V T++A + + + + +R+ L E ++ L LE +
Sbjct: 84 LLPTELADVLDTIQAAHTLRRGFFRTQ----TATRRHPGLAEFIEAIASLPALEADLART 139
Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
+ + I LD AS +L IR + K L L ++ A AG + ++T R R
Sbjct: 140 VGPRGEI-LDTASAELAEIRRDLKSAHARLLDRLNRMIASGEYAGALQDAIVTMREGRYV 198
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +KA H+ +P G+ S+SG T F+EP V+ NN L +E E IL +
Sbjct: 199 IPVKADHRGQVP-GVVHGTSASGVTLFIEPMNVVDLNNRWRELQMAEEHEVERILRARSD 257
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS------INIE 293
+IA + ++ ++ V+ DLA A+A A + P L S H + ++S IN+
Sbjct: 258 QIASAAGDLGRSVEAVVAFDLALAKARLAFDLRAHEPGLVS-GHGNAETSGHARHRINLR 316
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
+HPLL +++ VPID+++ RV
Sbjct: 317 QARHPLLDPATV-----------------------------------VPIDVRLGETYRV 341
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
+VITGPNTGGKT ++KT+GL ++M+++GL++PA + L F I AD+GD QS+EQ+LS
Sbjct: 342 LVITGPNTGGKTVALKTVGLLAMMAQSGLFIPAADGSELSVFPAIYADVGDEQSIEQSLS 401
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFS H+ R++ +L R+SLVL+DE+G+GTDP EG ALA +I++ L +R LA+VTTHY
Sbjct: 402 TFSSHMRRVIAMLRSADRDSLVLLDELGAGTDPQEGSALARAIIEALLERGSLAIVTTHY 461
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
++L ENA+ EF +ETL PTYR+L G G SNAL IA+ +G +I A++
Sbjct: 462 SELKAFAYVTAGTENASVEFDVETLAPTYRLLTGIPGRSNALAIARRLGLPEPVIAEARR 521
Query: 534 LVERLRPERQQHRKSELYQSLMEER 558
L PE + R E+ + +R
Sbjct: 522 Y---LTPESE--RVEEMLSEIQHQR 541
>gi|256965209|ref|ZP_05569380.1| MutS 2 protein [Enterococcus faecalis HIP11704]
gi|307273312|ref|ZP_07554558.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0855]
gi|256955705|gb|EEU72337.1| MutS 2 protein [Enterococcus faecalis HIP11704]
gi|306510297|gb|EFM79321.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0855]
Length = 788
Score = 275 bits (704), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 253/841 (30%), Positives = 406/841 (48%), Gaps = 127/841 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYRE-IEDEAKDLD--RRAAHLKAK 599
+ L E RRK+ +AR +A+LH E+ + Y+ E+ K+L R+ A+
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEEREKELQKARKEANKIIA 580
Query: 600 ETQQVQQEL--NFAKVQIDTVVQDF--ENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
E ++ + + + K+Q+++ Q E+QL DA S + E+ +A
Sbjct: 581 EAEENAETIISDIRKMQLESGQQGGVKEHQLIDAKTQL--SRLHHEETKLAK-------- 630
Query: 656 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
V + + G++V V + G + T+++ G VQ G +++ V + ++
Sbjct: 631 --NKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEEDMT 686
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
P+ AP Q+E + + S E + G + LDLRG R EEA
Sbjct: 687 PV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYEEAL 724
Query: 776 HQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAY 833
++D I A + ++HG GTG ++ + E L+NH V YE +P N G A
Sbjct: 725 AEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGNGAT 783
Query: 834 I 834
+
Sbjct: 784 V 784
>gi|422685288|ref|ZP_16743509.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4000]
gi|315029974|gb|EFT41906.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX4000]
Length = 788
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 251/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVHRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|421871064|ref|ZP_16302686.1| mutS2 family protein [Brevibacillus laterosporus GI-9]
gi|372459691|emb|CCF12235.1| mutS2 family protein [Brevibacillus laterosporus GI-9]
Length = 785
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 241/833 (28%), Positives = 393/833 (47%), Gaps = 126/833 (15%)
Query: 12 PFGK--SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
PF ++ +Q+ + S L + S PL I +I G + A +L+P E+ +
Sbjct: 36 PFNHIDAVRHAQRQTEEASTVLRVKGSVPL--GGIRNIRGPIQRARLNSILAPLELLDIA 93
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
TL A + + +T+ +E S L L+ L +LE +I CID ++ D
Sbjct: 94 TTLHAGRRLKQFITDISEE-----HELSILQSLVDRIEGLRDLETEIKRCIDDNGEVV-D 147
Query: 130 RASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
AS +L IR E + R E LD + + + Q I +T R R + +K
Sbjct: 148 SASLELRQIRQEIRSSEARIREKLDQMTRSSSTQKMLMENI----VTIRGDRFVIPVKQE 203
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM--EVRLSNSEIAEETAILSLLTAEIAK 243
++ GI + S+SGAT F+EP+ V NN E RL E IL LT +A
Sbjct: 204 YRSHF-GGIVHDQSASGATLFIEPEVIVSMNNKLREARLKEEHEVER--ILYTLTVLVAD 260
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+ + + E+D FA+A A M + P L+ + ++ +HPL+
Sbjct: 261 HVEMLLENLSVLAELDFIFAKAQLAYSMKAISPKLNEEGYILLKKG------RHPLI--- 311
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+P VP+D+++ +V+TGPNTGG
Sbjct: 312 ------------DP--------------------KVVVPLDVELGKGYTGIVVTGPNTGG 339
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KTLGL SLM+ AGL++PA+ + F I ADIGD QS+EQ+LSTFS H++ I+
Sbjct: 340 KTVSIKTLGLLSLMTMAGLHIPAQEETEMAVFSSIFADIGDEQSIEQSLSTFSSHLTNII 399
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
IL+ + +SLVL DE+G+GTDP+EG ALA SIL ++ + V TTHY++L
Sbjct: 400 RILDQMDEKSLVLFDELGAGTDPTEGAALAMSILDHVLAKGARLVATTHYSELKAYAYDT 459
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
NA+ EF ++TLRPTYR+L G G SNA IA +G + +II +A++ V ++
Sbjct: 460 PEVVNASVEFDVQTLRPTYRLLVGVPGRSNAFAIASRLGLNEQIIDKARRSV-----SKE 514
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAE--------------IMDLYREIEDEAKDL 589
+++ ++ SL ++ E + A ++ + + + ++A++
Sbjct: 515 ENQVEKMIASLESNKKTAEKEREDAENIRKQAEELRQQLEEERRQFAEAKNRLLEKAEEE 574
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIAAI 648
R A L ++E + + +EL Q+ DF E++L DA N++++ + +
Sbjct: 575 ARVAVQLASEEAEVIIRELR----QMRKEGVDFKEHRLIDAKKRLGNAVLELEKEKVKKP 630
Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
+A R + + G++V V S G K + +V + LVQ G ++++
Sbjct: 631 AKAVR-------------ATQIKIGDEVMVDSFGQKGTVLDKVSSTE--YLVQLGIIKMK 675
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
VKK+++ + K + P ++ R++ S K LDLRG
Sbjct: 676 VKKDDMHVV-----KESVQPKKPVQYTTIKREANSV----------------KLDLDLRG 714
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
VE++ ++D L A + +IHG GTGV+++ V E LR H V +
Sbjct: 715 YNVEDSIQEIDRYLDDAVLSGFHKVSIIHGNGTGVLRKGVHEFLRRHRSVKSF 767
>gi|373857569|ref|ZP_09600310.1| MutS2 family protein [Bacillus sp. 1NLA3E]
gi|372452701|gb|EHP26171.1| MutS2 family protein [Bacillus sp. 1NLA3E]
Length = 785
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 240/789 (30%), Positives = 366/789 (46%), Gaps = 98/789 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LS +E+ V T+ + + + + AE D L+
Sbjct: 65 LGGIFDIRAHIKRAAIGGMLSSNELMQVASTVHVSRQMKRFIEDVAEEDVS----IPILV 120
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLLKKV 156
E + L ELE+ I ID + LD AS L +R++ R E LDS+++
Sbjct: 121 EFSEQIIVLAELEQSIKMAIDDNGEV-LDGASATLRSLRHQLRSKEARVREKLDSMIRSS 179
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
AQ + LIT R R + +K ++ GI + SSSG T F+EP+ VE N
Sbjct: 180 NAQKM----LSDALITIRNDRFVLPVKQEYRSHY-GGIIHDQSSSGQTLFIEPQSIVELN 234
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N + E E IL LTA +A+ + ++ ++ + E+D FA+A +A+ + P
Sbjct: 235 NELQGIRLKEEQEIQRILIELTAHVAEYQEDLATVVVVLTELDFMFAKARYAKRIKASKP 294
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++ + + + + +HPL+ P+ V N
Sbjct: 295 TMNHEGRIFLNKA------RHPLI----------------PIDEVVAN------------ 320
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
DI + + +VITGPNTGGKT ++KT+GL +LM++AGL +PA + + FD
Sbjct: 321 -------DITIGIDFSTIVITGPNTGGKTVTLKTVGLCTLMAQAGLQVPAFDGSEMAVFD 373
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ ADIGD QS+EQ+LSTFS H+ IVDIL+ V SLVL DE+G+GTDP EG ALA SI
Sbjct: 374 EVYADIGDEQSIEQSLSTFSSHMVNIVDILKKVDSNSLVLFDELGAGTDPQEGAALAISI 433
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + R + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 LDEVYKRSAKVIATTHYPELKAYGYNREGVSNASVEFDVETLSPTYKLLIGVPGRSNAFE 493
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I++ +G D +I+ A+ V ++ + SL RR+ E + L
Sbjct: 494 ISRKLGLDESVIENARSHV-----SADTNQIENMISSLEASRRQAEIEQEETNELLRNAE 548
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS 636
L+ ++ E R + K + + + AK + + V++D + A+
Sbjct: 549 KLHDNLQKEMIAFYDRKDQMFEKAEDEALEIVEKAKSEAEGVIRDLRKMRIEKQAE---- 604
Query: 637 LIKESESAIAAI-VEAHRPDDDFSVS----ETNTSSFTPQFGEQVHVKSLGDKLATVVEV 691
+KE E A +EA P S T SFT G++V V S G K + +
Sbjct: 605 -VKEHELIDAKKRLEAAAPTKTVKRSPVKQATKKHSFTA--GDEVKVVSFGQKGLLINKT 661
Query: 692 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 751
D VQ G ++++V++ ++ I +PAP QE R +
Sbjct: 662 S--DHGWQVQIGILKMKVEEEDLIYI--------GSPAP-----QEKRHLATVRGKEYHV 706
Query: 752 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 809
S LDLRG R E A +++ I A S + +IHG GTG +++ V +
Sbjct: 707 SL---------ELDLRGERFENALMRVEKYIDDALLASYPRVSIIHGKGTGALRQGVQDY 757
Query: 810 LRNHPRVAK 818
L+NH V K
Sbjct: 758 LKNHRSVKK 766
>gi|317129869|ref|YP_004096151.1| MutS2 family protein [Bacillus cellulosilyticus DSM 2522]
gi|315474817|gb|ADU31420.1| MutS2 family protein [Bacillus cellulosilyticus DSM 2522]
Length = 788
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 246/816 (30%), Positives = 388/816 (47%), Gaps = 107/816 (13%)
Query: 17 LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+E +QK + + L + PL I DI + A G L+ E+ V T+ +
Sbjct: 43 IEHAQKSTYEGAKVLRLKGQAPL--GGIRDIRASVKRAKIGGALNEIELLDVSSTIYG-S 99
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
+K EA D L + + EL +N LT++E I ID + LD AS L
Sbjct: 100 RRFKSFVEAMIEDEVEL---TIIPELAENIVPLTDVERDIKQAIDENGEV-LDSASPALR 155
Query: 137 LIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
+R ++ R+ E+ L+S+ + + + + GI IT R R + +K ++
Sbjct: 156 TLR-QQIRSYESSVRSKLESITRSSSGRKMLSDGI----ITIRNDRYVIPVKQEYRGHF- 209
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNM--EVRLS-NSEIAEETAILSLLTAEIAKSEREI 248
G+ + S+SGAT F+EP VE NN E R+ EI+ LS+L +E+A+ E+
Sbjct: 210 GGMVHDQSASGATLFIEPSSVVEINNQLREARMKEKQEISRILLALSVLVSEVAE---EL 266
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+++ + EID FA+A ++ + G P L+ D I++ +HPL+
Sbjct: 267 LTIVEVMSEIDFIFAKALYSLEIGGTQPKLNE------DGYIHMAKARHPLI-------- 312
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
D VPIDI++ E +VITGPNTGGKT ++
Sbjct: 313 ---------------------------AKDEIVPIDIEIGKEYSSLVITGPNTGGKTVTL 345
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM ++GL +P + F I ADIGD QS+EQ+LSTFS H++ IVDIL+
Sbjct: 346 KTVGLLTLMVQSGLQIPCEEGSSAAVFQHIFADIGDEQSIEQSLSTFSSHMTNIVDILKH 405
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V SLVL DE+G+GTDP+EG ALA SIL Y+ + + TTHY++L N
Sbjct: 406 VDHRSLVLFDELGAGTDPTEGAALAISILDYVYNVGAKVIATTHYSELKGYAYNREGVMN 465
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETLRPTYR+L G G SNA I++ +G II+ A+ + ++
Sbjct: 466 ASVEFDVETLRPTYRLLIGVPGRSNAFAISRRLGLSDTIIEDAKSHI-----TADTNKIE 520
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
+ SL R+ E + + L E L++++E E + L + + ++ +Q L
Sbjct: 521 NMIASLESSRKNAEREMEESELLRKEAEQLHQQLEKEFEKLQMEREKILQQAEEKAEQSL 580
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETNT 665
N A + + ++ + R + + LI K E A +V + + S +
Sbjct: 581 NKATAEAEKIISELREIQRSNPQIKDHQLIEAKKRLEEAKPHLVNKKSNEKPKTSSNSKK 640
Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
P G++V V S K V +V +D VQ G M+++VK ++I+ + + K
Sbjct: 641 KKLIP--GDEVKVLSFDQKGHIVEQV--NDKEYFVQLGMMKMKVKADDIQYMSSPK---- 692
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DI 780
Q ++QS S + K LDLRG R + A ++ D
Sbjct: 693 ----------QLEKQSLSTVRGKD--------SHVKTELDLRGERYDSAMMEVEKYLDDA 734
Query: 781 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
LA + S +IHG GTG +++ V ++L+ H V
Sbjct: 735 VLAGYHQVS---IIHGKGTGALRKGVQDLLKTHRNV 767
>gi|384165327|ref|YP_005546706.1| DNA mismatch repair enzyme [Bacillus amyloliquefaciens LL3]
gi|328912882|gb|AEB64478.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
LL3]
Length = 785
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 242/836 (28%), Positives = 405/836 (48%), Gaps = 107/836 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LADIQKQLDEVEEASAIMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG S+ PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVSI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIVQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P ++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYTTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDHVFADIGDEQSIEQSLSTFSSHMVNIVSILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I++ +G II +A+ + +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521
Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
SL + +++ + + S+ E L++E++ + +L+ + L + Q+ ++L
Sbjct: 522 MIASLEQSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKLMEEAEQKAAEKLE 581
Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
A + + ++++ + + R E+ K A+ A ++ +P+
Sbjct: 582 DAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPER----KTEKKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K A ++E G+ + VQ G ++++VK+ ++ + ++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P P+ K A ++ + Y ++ LDLRG R E A ++ D
Sbjct: 688 -PEPKKEK---------AITAVKGKDYHVSLE-----LDLRGERYENALSRVEKYLDDAV 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L+NH V +++ + G T+ +K
Sbjct: 733 LAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK 785
>gi|403237728|ref|ZP_10916314.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 10403023]
Length = 786
Score = 275 bits (703), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 237/833 (28%), Positives = 397/833 (47%), Gaps = 98/833 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
++EE L QT A +++ + + L + DI + A G L+ E+ + T+ A
Sbjct: 39 NVEEVIFLQEQTDEAAKVLRLKGNVPLGGLTDIRAAVKRASIGGALNTLELLDIAGTIYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
KK E D L P+L EL+ + L ELE+KI CID +++D AS+
Sbjct: 99 -GRQMKKFIEGMIEDDIEL----PILAELITSITPLYELEQKIKNCIDDNG-VVMDGASD 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R E LD +++ +AQ + +IT R R + +K ++
Sbjct: 153 KLRGIRQQLRSSEARIREKLDHIIRSSSAQ----KTLSDAIITIRNDRYVIPVKQEYRGT 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSGAT F+EP+ V+ NN+ E E IL L+ E+A +
Sbjct: 209 Y-GGIVHDQSSSGATLFIEPQSVVDLNNVLQEARVKEKQEIDRILFELSNEVALETESLY 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+D + E+D F +A +++ + G P ++ +V +HPL+ +
Sbjct: 268 QNVDTLGELDFMFTKASYSKKVKGSKPKINGNGYVLIKKG------RHPLIAPKDV---- 317
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
VP DI++ + +VITGPNTGGKT ++K
Sbjct: 318 -------------------------------VPNDIELGKKYTSIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL ++M+++GL +PA+ + F+ + ADIGD QS+EQ+LSTFS H+ IVDIL+ V
Sbjct: 347 TIGLLTIMAQSGLQIPAQEESEIAVFESVYADIGDEQSIEQSLSTFSSHMVNIVDILKRV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
SLVL DE+G+GTDP EG ALA SIL + +R + TTHY +L NA
Sbjct: 407 DSTSLVLFDELGAGTDPQEGAALAISILDEVYNRGARVIATTHYPELKAYGYNREGVINA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF +ETL PTY++L G G SNA I+K +G II A+ + + +
Sbjct: 467 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLSDTIIHAAKSHI-----SSETNTVEN 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL + ++ E + A + + L+++++++ + + + L K ++ ++ +
Sbjct: 522 MIASLEKSKKDAERELDEAEGIRKQAEILHKQLQEQIIEFNEQRDKLYEKAERKAEETIK 581
Query: 610 FAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
A + + V++D +L S + + LI+ + A+ + + + +++
Sbjct: 582 NATTEAEEVIRDLRKMKLEQQSLVKEHQLIEAKKRLENAVPQTSKKTNKQAIASKAKRKL 641
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
P G++V V SL K ++E G+++ VQ G ++++VK+ ++ I +P
Sbjct: 642 VP--GDEVKVISLNQK-GHLIENTGNNEW-QVQIGILKMKVKEKDLEFI--------GSP 689
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALAC 784
P E + + + S LDLRG R E+A +D AL
Sbjct: 690 KP-----VETKPLATVRGKDYHVSL---------ELDLRGERYEDALVRVEKYIDDALLA 735
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
R + +IHG GTG +++ V E L+NH V ++ + G TV +K
Sbjct: 736 GYPR--VSIIHGKGTGALRQGVQEYLKNHRSVKSTRFGEAGEGGTGVTVVELK 786
>gi|295706821|ref|YP_003599896.1| DNA mismatch repair protein MutS [Bacillus megaterium DSM 319]
gi|294804480|gb|ADF41546.1| DNA mismatch repair protein MutS [Bacillus megaterium DSM 319]
Length = 787
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 259/842 (30%), Positives = 405/842 (48%), Gaps = 128/842 (15%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ + L + + PL I D+ + A G LS +E+ V T+ A V K
Sbjct: 47 QEATDEATTVLRLRGNVPL--GGIFDVRPSVKRAEIGGTLSSNELLDVASTIYAARQV-K 103
Query: 81 KLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E D D LQ P++ E ++ L E+E+ I ID +LD AS+ L IR
Sbjct: 104 QFIEQVVEDED-LQL--PIITEHIEKLMPLPEVEQTIKMSIDENG-TVLDGASDQLRGIR 159
Query: 140 AERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ + R E L+SL++ +AQ + I +T R R + +K ++ GI
Sbjct: 160 QKLRSTESRIREKLESLIRSSSAQKMLSDAI----VTIRNERFVIPVKQEYRSAY-GGIV 214
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI------LSLLTAEIAKSEREIK 249
+ SSSGAT F+EP+ V NN L +++ E+ I L++ AE+A R+
Sbjct: 215 HDQSSSGATLFIEPQAIVTLNN---ELQEAKVKEKQEIERILIALTVQVAEVANELRQNV 271
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
YL+ E+D FA+ ++ + P ++ + ++ + KHPL+
Sbjct: 272 YLLG---ELDFMFAKGRYSHELKASKPKMNDRGYIKLVKA------KHPLIA-------- 314
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+ DV V DI++ + +VITGPNTGGKT ++K
Sbjct: 315 ---------QEDV------------------VANDIELGDQYTSIVITGPNTGGKTVTLK 347
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL +LM++AGL +PA + + F + ADIGD QS+EQ+LSTFS H+ IVDIL+ V
Sbjct: 348 TLGLFTLMAQAGLQIPALDGSEMAVFKHVFADIGDEQSIEQSLSTFSSHMVNIVDILQKV 407
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L NA
Sbjct: 408 DHESLVLFDELGAGTDPQEGAALAISILDQVYERGARVVATTHYPELKAYGYNREGVVNA 467
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF +ETL PTY++L G G SNA I+K +G ++I+RA+ + + ++
Sbjct: 468 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLSAEVIERAKGYI-----GSETNKVEN 522
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL + RR+ E + A L E L++E++ + + + + L K ++ Q +
Sbjct: 523 MIASLEDSRRQSEHELEEAEELRKEAQKLHKELQSQIIEFNEKRDKLYEKAEEKAQATVK 582
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
A + + ++ D LR S ++L+KE E ++EA + +D +V S
Sbjct: 583 AASEEAEKIISD----LRKMSQKN-HALVKEHE-----LIEARKRLED-AVPTLEKSKKK 631
Query: 670 P----------QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
P Q G++V V S G K T+VE +++ VQ G M+++VK+ ++ I +
Sbjct: 632 PAVPKKQERTLQAGDEVKVLSWGQK-GTLVERVSNNEW-QVQMGIMKMKVKEKDLEYI-S 688
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----S 775
S + P ++ G N E LDLRG R E A
Sbjct: 689 SPKPVETKPLATVK--------GKDYHVNLE-------------LDLRGERYENALIRVE 727
Query: 776 HQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAY 833
+D AL R + +IHG GTG +++ V E L+NH V ++ + S G TV
Sbjct: 728 KYIDDALLANYPR--VSIIHGKGTGALRKGVQEYLKNHRSVKNIRFGEASEGGSGVTVVE 785
Query: 834 IK 835
K
Sbjct: 786 FK 787
>gi|422697088|ref|ZP_16755036.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1346]
gi|315174484|gb|EFU18501.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1346]
Length = 788
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 251/844 (29%), Positives = 401/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L N + K G D + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYIWREQLEVLPELN----RQLKQGIDDDG---YVTDEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L+NH V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKNHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|347752968|ref|YP_004860533.1| MutS2 family protein [Bacillus coagulans 36D1]
gi|347585486|gb|AEP01753.1| MutS2 family protein [Bacillus coagulans 36D1]
Length = 784
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 250/832 (30%), Positives = 395/832 (47%), Gaps = 100/832 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
S EE ++ +T A +++ + + L I DI L A G L+P E+ + T+
Sbjct: 39 SYEEVVRMQEETDEAAQVLRLKGHVPLFGIYDIRRHLKRAAIGGRLNPQELVQIASTIH- 97
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V+ K+ E + L P+L ++ LT LE +I +D I LD ASE
Sbjct: 98 VSRTMKRFIEGITEEETEL----PILTSMVDRIAVLTPLEHEIRNAVDENGEI-LDSASE 152
Query: 134 DLELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L IR +R E L+ ++ K AA++ + +IT R R C+ +K ++
Sbjct: 153 TLRQIRHGLRGTERRIREKLEGYIRGKNAAKM-----LSDAIITIRNDRYCIPVKQEYRA 207
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
GI + SSSG T F+EP+ V+ NN E E ILS L+A +A + E+
Sbjct: 208 NY-GGIVHDQSSSGQTLFIEPQSVVDLNNQLREWHLKEQQEVERILSELSAAVAAAGGEL 266
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ +++ + + D FA+A + + + G P++++ +I + +HPLL
Sbjct: 267 ETIVEILADFDFMFAKALYGRSIKGSKPVINNHG------AIRMFKARHPLL-------- 312
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
P +D VP DI + E +VITGPNTGGKT ++
Sbjct: 313 --------P-------------------ADKVVPNDITIGQEYTTIVITGPNTGGKTITL 345
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM++AGL +PA + + F + ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 346 KTIGLCTLMAQAGLQIPALDGSEMAVFKEVFADIGDEQSIEQSLSTFSSHMTNIVEILKR 405
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V +SLVL DE+G+GTDP EG ALA SIL + R V TTHY +L N
Sbjct: 406 VDDQSLVLFDELGAGTDPQEGAALAISILDEVYKREARVVATTHYPELKAYAYNREGVVN 465
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETL PTYR+L G G SNA I++ +G II+ AQ L+ E +
Sbjct: 466 ASVEFDVETLSPTYRLLIGVPGRSNAFEISRRLGLSPSIIEHAQSLIGADTNEVEN---- 521
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
+ +L RR+ E + + A L + +L+R+++ + R L K ++ + +
Sbjct: 522 -MIAALESARREAEKERQEAQELLKDAEELHRDLQKQMAAFYARRDELYGKAEKKAAKVV 580
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSS 667
AK + + +++D ++ A+ +KE E A +E P D +
Sbjct: 581 EEAKEKAEEIIRDLRKMQLESKAN-----VKEHELIDARKQLEELAPKLDRKPAAKAKKQ 635
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
Q G++V V S K + + G + LVQ G ++++VK++++ I
Sbjct: 636 HIYQPGDEVKVLSFNQKGTLLEQTAGGE--WLVQMGILKMKVKESDMEYI---------- 683
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALA 783
P +KQ E + G + + LDLRG R E+A +D AL
Sbjct: 684 -RPPQQKQPEKHLATVRGRDSHVSL----------ELDLRGERYEDALLKVEKYIDDALL 732
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
R + +IHG GTG ++ V E L++H V + P G V ++
Sbjct: 733 AGYPR--VSIIHGKGTGALRNGVQEFLKHHRAVKRIRLGEPGEGGSGVTIVE 782
>gi|374711381|ref|ZP_09715815.1| recombination and DNA strand exchange inhibitor protein
[Sporolactobacillus inulinus CASD]
Length = 783
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 242/829 (29%), Positives = 394/829 (47%), Gaps = 106/829 (12%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ + L + S P I D+ L + G LL E+ + T+R + K
Sbjct: 47 QEATDEGTTVLRLKGSVPF--GGITDVRPALKRSKIGGLLQARELIDLADTIRGARLMKK 104
Query: 81 ---KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
L E EL+ LQ E + + ELE KI ID + + +D AS L
Sbjct: 105 FILNLIEDQELELPILQ------ECTETIDPPGELERKIRRAIDDQGGV-MDSASPALRH 157
Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + DS +K+ I ++ G + + LIT R R + +K ++ GI
Sbjct: 158 IRGQ----IRTCDSRVKQKLENIVRSSGKMLSETLITIRNDRQVIPVKQQYRASF-GGIV 212
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SGAT F+EP+ V+ NN E E IL +L+ E ++ + ++ +
Sbjct: 213 HDQSASGATLFIEPQAIVDLNNQLSEARAKERHEIERILRVLSEETSEYAEVMLENIEAL 272
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
++D FA+AG+A + P L+ Q I ++ +HPL+ +
Sbjct: 273 AQLDFIFAKAGYAHEIKATRPKLNDQG------IIRLKKARHPLIDRQRV---------- 316
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VPID+ + T ++ITGPNTGGKT S+KT GL +
Sbjct: 317 -------------------------VPIDVLFDEHTHALIITGPNTGGKTVSLKTTGLLT 351
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM+++GL +P F + ADIGD QS+EQ+LSTFS H++ IV IL+ V SLV
Sbjct: 352 LMAQSGLQIPVDEGSEASVFREVFADIGDEQSIEQSLSTFSSHMTNIVTILKRVDFNSLV 411
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+G+GTDP EG AL+ SIL + + V TTHY++L + NA+ EF +
Sbjct: 412 LFDELGAGTDPQEGAALSMSILDAVYGKGATIVCTTHYSELKAYAYERQGVMNASVEFDV 471
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
ETL PTYR+L G G SNA I++ +G +II A +L+ + ++ ++ SL
Sbjct: 472 ETLSPTYRLLLGVPGRSNAFEISRKLGLPAEIIAGA-----KLQISTETNQVDKMIASLE 526
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
+ R+ E + A L E+ ++ + +L+R + K ++ ++ L+ A+ +
Sbjct: 527 QNRKTAEREEERARKLKLEVEAREADLTKKLNELERSKEEILNKAREKAERALSGARREA 586
Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS---SFTPQF 672
+ ++++ N + E + LI ++++ +A +++ +P D V + SF P
Sbjct: 587 EEIIEELRNYQHSGNVKE-HQLI-DAKTKLAHALDSLQPKDSDQVKKPEQKLDRSFHP-- 642
Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 732
G+ V + S G + V ++ D LVQ G +++ VK N+++ I K K A P +
Sbjct: 643 GDTVKIISFGQEGYIVSKI--SDQDYLVQAGILKMNVKANDLKRI---KEKKQAKPVVNV 697
Query: 733 RKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ----LDIALACWESR 788
R QT + LDLRG R E+A + LD A+ +R
Sbjct: 698 RTA---------------------TQTVRPELDLRGERYEDAMRRVEKYLDEAMLAGYAR 736
Query: 789 SVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
+ +IHG GTG +++ V +++ HPRV A+ + G TV K
Sbjct: 737 --VSIIHGKGTGALRKGVTKLIDRHPRVKNARLGSQGEGGSGVTVVEFK 783
>gi|257870172|ref|ZP_05649825.1| DNA mismatch repair protein MutS [Enterococcus gallinarum EG2]
gi|257804336|gb|EEV33158.1| DNA mismatch repair protein MutS [Enterococcus gallinarum EG2]
Length = 787
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 246/813 (30%), Positives = 390/813 (47%), Gaps = 119/813 (14%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
IE+I + G L+ E+ V R L N + + + + DS + L E
Sbjct: 68 IENIRPQMKRIEIGADLNGLELAQVGRVLVTANELKRFFEDLS----DSEIEFERLYEWE 123
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQ 159
K L L ++ +D + D AS +L +IR +R+ E LDSL++ A+
Sbjct: 124 KQLVTLPTLSRRLKEAVDEDGRLT-DEASPELRVIRQNIRRSERTIRETLDSLVRGGNAK 182
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ ++T R R + +K ++ + G+ + SSSG T F+EPK V+ NN
Sbjct: 183 Y-----LSDTIVTMRNERYVIPVKQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVDQNN-- 234
Query: 220 VRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
RL +IAE T I L+ L+AE+A +REI + + +D A+A F + + + P
Sbjct: 235 -RLRQHQIAERTEIERILAELSAELAPYQREILHNAYVIGMMDFMNAKARFGKELQAIVP 293
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+++ +HV F + +HPL+ D E
Sbjct: 294 AINTDNHVVFKQA------RHPLI--------------------DQEKV----------- 316
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP DI + + + VVITGPNTGGKT ++KTLGL +M ++GL + ++ F
Sbjct: 317 ----VPNDIAIGEDYQAVVITGPNTGGKTITLKTLGLLQIMGQSGLPILVDEESQMGIFQ 372
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQ+LSTFS H++ IVD+L+ V SLVL DE+G+GTDP EG ALA +I
Sbjct: 373 EIFADIGDEQSIEQSLSTFSSHMTTIVDVLKKVDHTSLVLFDELGAGTDPQEGAALAIAI 432
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L L R + TTHY +L NA+ EF ++TL PTYR+L G G SNA
Sbjct: 433 LDELGARSAYVMATTHYPELKVYGYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFE 492
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+K +G D +II++A+++++ Q L E LE++ + + + E+
Sbjct: 493 ISKRLGLDTQIIEQAKQIMDGES------------QDLNEMIADLENRRKMTETEYLEMR 540
Query: 577 DLYREIEDEAKDL--------DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLR 627
E E K+L + R A L AK ++ Q + AK + + ++ D N QL
Sbjct: 541 HYVEEAERLQKELKQAYNFFFEEREAEL-AKARKKANQIVEEAKEESEKIISDIRNMQLS 599
Query: 628 DASADEINSLIKESE--SAIAAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGD 683
S +KE E +A + + H+ + V + ++ T + G++V V S G
Sbjct: 600 SG-----QSHVKEHELIAARTKLSDLHQEEHLQKNKVLQKAKAAKTLKVGDEVLVTSYGQ 654
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
+ T+++ G VQ G +++ + +++++P A P +E Q
Sbjct: 655 R-GTLIKKMGQSQW-QVQLGILKMTLPESDLQP---------AAPV------KEPVQRVV 697
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
+ E+S+ P N LDLRG R EEA +++D L + ++HG GTG
Sbjct: 698 HTVRSAESSHVP------NQLDLRGKRYEEALNEVDQYLDATILAGYPQVTIVHGKGTGA 751
Query: 802 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
+++ + E L+NH V +E +P N G A I
Sbjct: 752 LRQGITEYLKNHRSVKSFE-FAPANQGGNGATI 783
>gi|425738677|ref|ZP_18856935.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus massiliensis S46]
gi|425479024|gb|EKU46205.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus massiliensis S46]
Length = 782
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 230/803 (28%), Positives = 377/803 (46%), Gaps = 93/803 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I+ + A G +L+ E+ A++R ++ N + E D + Y L
Sbjct: 65 LSGLSKISDYVKRATIGSVLNVKELNAIKRVIQVQNQFKTFYNQMVEEDEKIV--YPILN 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
E ++ LT+L + I C + D AS L IR++ + L K+
Sbjct: 123 EQIEQLPVLTDLYQTIHQT--CDESDLFDDASPTLHSIRSKISTTNHRIRQQLDKIVKSQ 180
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +KA ++ +GI + S+SG T ++EP VE NN
Sbjct: 181 SNQKKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMNNQIS 239
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSS 280
RL + E E IL+ LT +A + ID A+A +A+ + G P ++
Sbjct: 240 RLRSEEDTERARILTELTTLVATDSEGCLSAESIMGHIDFLTAKARYARSIKGTKPTFTT 299
Query: 281 QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP 340
+ + HPLL ++ SN+ + D+E
Sbjct: 300 NRDIYLPKAF------HPLLDAETV------VSNTIEFEPDIE----------------- 330
Query: 341 VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILA 400
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L FD +
Sbjct: 331 ------------TVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSKLGVFDHVFC 378
Query: 401 DIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL 460
DIGD QS+EQ+LSTFS H+ IV+IL+ ++ SL+L DE+G+GTDP+EG LA SIL Y+
Sbjct: 379 DIGDEQSIEQSLSTFSSHMKTIVNILDEANQNSLILFDELGAGTDPTEGATLAMSILDYV 438
Query: 461 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 520
+ L + TTHY +L NA+ EF + TL PTY++L G G SNA I+K
Sbjct: 439 HEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFEISKR 498
Query: 521 IGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHAEIMDL 578
+G +II A+ +V E +S + + E++ +L++ R A ++H E+
Sbjct: 499 LGLKLQIINHAKSMVGHDEKEINAMIESLERNTKRVDEQKIELDALIREAETMHKELDQT 558
Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI--NS 636
Y ++ K L +A K K Q+V++ A + DT++++ Q+RD ++ +
Sbjct: 559 YTAYQNYEKRLMEQA---KEKANQRVKE----ATKEADTILKELR-QMRDKKGVDVKEHE 610
Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 696
LI + + +E D + + G++V V S G K V+E+ DDD
Sbjct: 611 LIDKKKR-----LENQYEADSLKANVKKKKWDKIKAGDEVKVLSYGQK-GEVLELL-DDD 663
Query: 697 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 756
+VQ G +++++ P+ + ++K P + +R S
Sbjct: 664 EAVVQMGIIKMKL------PLNDLEKKEKQKEKPSKMVTRHNRTS--------------- 702
Query: 757 VQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
K LDLRG R E+A +LD L A + +++IHG GTG +++ V + L+ H
Sbjct: 703 ---VKMELDLRGYRYEDALIELDQYLDQAVLSNYENVYIIHGKGTGALQKGVQKHLKRHK 759
Query: 815 RVAKYEQESPM--NYGCTVAYIK 835
+A + P +G TVA +K
Sbjct: 760 SIASFRSGVPSEGGFGVTVAELK 782
>gi|153940847|ref|YP_001392400.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum F str. Langeland]
gi|384463373|ref|YP_005675968.1| MutS2 family protein [Clostridium botulinum F str. 230613]
gi|189030427|sp|A7GHZ0.1|MUTS2_CLOBL RecName: Full=MutS2 protein
gi|152936743|gb|ABS42241.1| MutS2 family protein [Clostridium botulinum F str. Langeland]
gi|295320390|gb|ADG00768.1| MutS2 family protein [Clostridium botulinum F str. 230613]
Length = 788
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 229/782 (29%), Positives = 385/782 (49%), Gaps = 85/782 (10%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+ DI + A G L P ++ + LR + + E + Y L +
Sbjct: 68 VYDIRNGIYLAEKGSALLPGQLLKIAAVLRCARRFKEYINHKEEEES-----YRVLENIC 122
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQ 159
+ L ++EE+I I+ + I DRAS L IR K + ++SL++ ++
Sbjct: 123 EGIFSLPKIEEEIFNAIEGEDEI-ADRASSTLYNIRRSLKEKNYSVRDKINSLVRSYSSY 181
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ + + T R R + +KA HK +P G+ + SS+GAT F+EP V NN
Sbjct: 182 L------QENIYTVRGDRYVLPVKAEHKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEI 234
Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
L E AE IL++L+A+I + +K + V E+D FA+A FA + CP ++
Sbjct: 235 KELMLKEKAEIERILTVLSAKINANITGVKTDANIVWELDFIFAKAKFASEYNCTCPTIN 294
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
++ V IEG +HPL ++ E+
Sbjct: 295 NEGIVDI-----IEG-RHPL----------------------IDRREV------------ 314
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
VPI +K+ E ++ITGPNTGGKT ++KT+GL LM+ +GL +PA+ + + +F+ +
Sbjct: 315 -VPISVKLGEEFTSLMITGPNTGGKTVTLKTVGLIHLMAMSGLMIPARENSVISYFNNVF 373
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV+I++ SLVL DE+G+GTDP+EG ALA SIL+
Sbjct: 374 ADIGDEQSIEQSLSTFSSHMKNIVEIMDKADENSLVLFDELGAGTDPTEGAALAISILEN 433
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
LR R + TTHY++L + ENA+ EF +ETLRPTYR+L G G SNA I+K
Sbjct: 434 LRKRGTKIIATTHYSELKAYALRKEGVENASVEFDVETLRPTYRLLIGIPGKSNAFEISK 493
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II A++ + + R EL ++L E+ K + AR A +L E
Sbjct: 494 RLGLPDYIIDFARENI-----SNENIRFEELIENLQEKSIKAQEDARLAENLKLERDKEK 548
Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 639
++ E++ + L + + ++ + + AK + D +++D R + + ++
Sbjct: 549 KKYEEKLEGLQKVRDNALIDARREAKNIIKEAKEEADKILKDIRQLERMGYSSDARRKLE 608
Query: 640 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
E + +++ + +V + + G++V + S+ K+ V+ P + VL
Sbjct: 609 EERKKLKDKLDSIEEKEIKTVHKGEALKNVKE-GDEVLLASINQKV-IVLSKPDNKGDVL 666
Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 759
VQ G M++ NI+ + +K N + S+ + ++
Sbjct: 667 VQAGIMKITA---NIKDLRAAKGSNF---------------NSSSSKIKKSKKLNLNLRR 708
Query: 760 SKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 817
++S+DLRGM EEA + +D L A + ++HG GTGV+++ ++++L+ H V
Sbjct: 709 VESSVDLRGMDAEEAIYTVDKYLDEAYLGGLGEVTIVHGKGTGVLRKTIMDMLKGHSHVK 768
Query: 818 KY 819
++
Sbjct: 769 RH 770
>gi|392971758|ref|ZP_10337151.1| DNA mismatch repair protein MutS [Staphylococcus equorum subsp.
equorum Mu2]
gi|392510297|emb|CCI60439.1| DNA mismatch repair protein MutS [Staphylococcus equorum subsp.
equorum Mu2]
Length = 782
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 223/808 (27%), Positives = 394/808 (48%), Gaps = 103/808 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I+ ++ A G +L+ SE+ ++R ++ + N +K + L+ + Y L
Sbjct: 65 LSGLAKISSFIHRATIGGVLNVSELNVIKRLIQ-IQNQYKTFYNSL-LNEEEEINYPILN 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
+ ++ L+ L + I C + D AS +L+ IR++ + + + L K+
Sbjct: 123 DRMEQLPVLSNLYQNI--HQKCDAYDLFDDASYELQGIRSKISKTTQRIKQNLDKIVKHQ 180
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +KA ++ +GI + S+SG T ++EP VE +N
Sbjct: 181 GNQKKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMSNQIS 239
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILS 279
N E E IL+ LT ++A+ E + + + ++ +ID A+A +A+ + G P +
Sbjct: 240 SFRNDEAVERERILTELTVQVAE-EADACLISESIMGQIDFLTAKARYARSIKGTKPEFT 298
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
+ D ++ + HPLL +S+ +N+ D+E
Sbjct: 299 T------DRTVYLPKAFHPLLDRTSV------VANTIEFAQDIE---------------- 330
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
V+ITGPNTGGKT ++KTLGL M+++G+ +P + +L F+ +
Sbjct: 331 -------------TVIITGPNTGGKTVTLKTLGLIIAMAQSGMLIPTLDGSKLSIFENVY 377
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
DIGD QS+EQ+LSTFS H+ IV+IL+ ++ SL+L DE+G+GTDPSEG ALA SIL +
Sbjct: 378 CDIGDEQSIEQSLSTFSSHMKNIVEILQDATKNSLILFDELGAGTDPSEGAALAMSILDH 437
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + L + TTHY +L NA+ EF + TL PTY++L G G SNA +I+K
Sbjct: 438 VHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISK 497
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G + ++IQ+A+ ++ + + +E+ SL ++++ Q E+ L
Sbjct: 498 KLGLNMQVIQKAKSMI-----GQDEQEINEMIASLEHNSKRVDEQ-------RIELDQLV 545
Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ---DFENQLRDASADEINS 636
RE ++ L ++ A + E Q + + A ++ + + D +LRD D+ +
Sbjct: 546 REAQEARDALAKQYAQYQNYEKQLLSEAKEKANQRVKSATREADDILKELRDLR-DKKGA 604
Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEV 691
+KE E I + + +D + + ++ G++V V + G K V+E+
Sbjct: 605 DVKEHE----LIDKKKQLEDQYEAKSLKQNVQKQKWDEIKAGDEVKVLTYGQK-GEVLEL 659
Query: 692 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 751
GD + V VQ G +++++ P+ + ++ P ++E+RQS
Sbjct: 660 IGDKEAV-VQMGIIKMKL------PLEDLEKTKKTKETPAKMIKRENRQS---------- 702
Query: 752 SYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEI 809
K LDLRG R +EA +D L A + +++IHG GTG +++ V +
Sbjct: 703 --------IKMELDLRGYRYDEAMVAVDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQKH 754
Query: 810 LRNHPRVAKYEQESPM--NYGCTVAYIK 835
L+ H V+ Y P +G TVA +K
Sbjct: 755 LKRHKSVSSYRNGMPSEGGFGVTVAELK 782
>gi|313884242|ref|ZP_07818008.1| recombination and DNA strand exchange inhibitor protein
[Eremococcus coleocola ACS-139-V-Col8]
gi|312620689|gb|EFR32112.1| recombination and DNA strand exchange inhibitor protein
[Eremococcus coleocola ACS-139-V-Col8]
Length = 785
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 240/822 (29%), Positives = 394/822 (47%), Gaps = 118/822 (14%)
Query: 40 DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPL 99
DL+T+E A+S LLS ++I + R L ++ K+L A L+G L L
Sbjct: 39 DLATVETWQAETEQALS--LLSQNQIIPIPR-LNDLSGAIKRLQVGASLNGKELADVGKL 95
Query: 100 LELLKNC-NFLTELE-------------EKIGFCIDCKLLI---------ILDRASEDLE 136
L +K +F + E E+ DC +I +L AS +L
Sbjct: 96 LSSVKQVHDFYAKQEADNRTYPALYAWIERSIVLKDCIAMIGEAISEEGDVLSSASTELA 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR +++ E + + L ++ A + LIT R +R + +KA HK + G
Sbjct: 156 RIRRAQQQTEEAVRNQLNQILKN--NASALSDTLITIRNNRYVLPVKADHKSQIK-GTVH 212
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SS+G T ++EP+ NN L + E E IL L+ ++ +I+ +
Sbjct: 213 DQSSTGQTLYIEPRSVETLNNRRSHLQSEENNEIAQILMDLSGQLMPYYEDIRQNQYIIG 272
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++D +RA + + + V P +S HVS + +HPLL +
Sbjct: 273 QLDYIQSRASYGRQLQAVRPKVSPDRHVSLIQA------RHPLL---------------D 311
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
P K V N +I + + R ++ITGPNTGGKT +KTLG+ L
Sbjct: 312 P-KQVVAN-------------------NIIIGQDYRTLIITGPNTGGKTILLKTLGILHL 351
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M +AGL++PA+ ++ FD + ADIGD QS+EQ+LSTFSGH++ +DIL+ + +SL+L
Sbjct: 352 MGQAGLHIPAQKGSQIGLFDQVFADIGDEQSIEQSLSTFSGHMTNTIDILKHATYQSLLL 411
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+GSGTDP EG ALAT+IL YL + TTHY +L + NA+ EF+ E
Sbjct: 412 FDELGSGTDPQEGAALATAILDYLTGAGMTTMATTHYPELKVYAHEAPHTINASMEFNAE 471
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TL PTYR+L G G SNAL I++ +G I+++A++ V + +E+ +L
Sbjct: 472 TLAPTYRLLIGIPGRSNALEISQRLGLPDYILEKARQGV-----SQDSQSINEMVANLET 526
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQVQQELNFAKV 613
ERR+LE+ + A+ L +++ E DR + A K + +++ A+
Sbjct: 527 ERRRLEADHQETEHRLAQADQLLKDLRTE---YDRWVTYKDALVEKAKHEANMKVDQAQK 583
Query: 614 QIDTVVQDFENQLRDASADE-INSLIKESE--SAIAAIVEAHRPDD--DFSVSETNTSSF 668
+ D ++Q+ +RD ++ N+ IKE + +P++ V + +
Sbjct: 584 EADKLIQE----IRDLQLEQGQNTTIKEHVLIDKKGKFDQLKQPENLRKNKVLKRQKAKQ 639
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
+ G+ V V S G + + V +V DD T VQ G +++ + ++ I + + K +
Sbjct: 640 ELRVGQDVLVHSYGQRGSIVDKV--DDKTFTVQMGILKMNLPAKDLEVIESIEAKKS--- 694
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
N + G +V T SLDLRG R E+A ++ + L A
Sbjct: 695 -----------------RVNVQRKAGAKVTT---SLDLRGRRYEDAMNETKLYLDKALLS 734
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+ ++ +IHG GTG +++ + ++L HP+V ++ SP N G
Sbjct: 735 NHPMVTIIHGKGTGALRQGIQQLLAVHPQVDHFDY-SPPNAG 775
>gi|384160390|ref|YP_005542463.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens TA208]
gi|384169470|ref|YP_005550848.1| recombination and DNA strand exchange inhibitor [Bacillus
amyloliquefaciens XH7]
gi|328554478|gb|AEB24970.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens TA208]
gi|341828749|gb|AEK90000.1| recombination and DNA strand exchange inhibitor [Bacillus
amyloliquefaciens XH7]
Length = 785
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 242/836 (28%), Positives = 405/836 (48%), Gaps = 107/836 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LADIQKQLDEVEEASAIMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG S+ PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVSI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIVQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P ++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYTTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDHVFADIGDEQSIEQSLSTFSSHMVNIVSILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I++ +G II +A+ + +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521
Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
SL + +++ + + S+ E L++E++ + +L+ + L + Q+ ++L
Sbjct: 522 MIASLEQSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKLMEEAEQKAAEKLE 581
Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
A + + ++++ + + R E+ K A+ A ++ +P+
Sbjct: 582 DAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPER----KTEKKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K A ++E G+ + VQ G ++++VK+ ++ + ++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P P+ K A ++ + Y ++ LDLRG R E A ++ D
Sbjct: 688 -PEPKKEK---------AITAVKGKDYHVSLE-----LDLRGERYENALSRVEKYLDDAV 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L+NH V +++ + G T+ +K
Sbjct: 733 LAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK 785
>gi|239636360|ref|ZP_04677362.1| MutS2 protein [Staphylococcus warneri L37603]
gi|239597715|gb|EEQ80210.1| MutS2 protein [Staphylococcus warneri L37603]
Length = 782
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 237/811 (29%), Positives = 393/811 (48%), Gaps = 109/811 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + +A ++ + G +L+ +E+ A++R ++ V N +K L+ D +Y L
Sbjct: 65 LSGLSKVAQYIHRSTIGGVLNVTELNAIKRLIQ-VQNQFKTFYNQL-LEEDEEVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ LT+L + I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 SQMAQLPILTDLFKDINDKCDAHDL--YDHASYELQSIRSKISSTNQRIRQNLDRVVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT+++A E + L + ++ +D A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILAELTSQVA-VESDALLLAESIMGHLDFLIAKARYARAIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + V ++ HPLL +++ +N+ D+E
Sbjct: 295 PTFHKERTVYLPNAY------HPLLDHNTV------VANTIEFVDDIE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++G+ +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGMLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILKEADKNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R+ L + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 ILDHVRNLGALVMATTHYPELKAYSYNREGVMNASVEFDVETLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S S + E+R +L+ + A + H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINNMIESLEKNSKRVDEQRIELDRLVKEAQATHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E+ Y++ ++ K L A K K Q+V+ A + D ++++ +LRD +
Sbjct: 554 ELAKQYQQYQNYEKSLMDEA---KEKANQRVKS----ATKEADAILKELR-ELRDQKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + DD + + ++ G++V V S G K +
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQNVQKQKYDKIQAGDEVKVLSYGQKGEVL 657
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
V + +VQ G +++++ PI + ++ P + +R
Sbjct: 658 ELVGE--EEAVVQMGILKMKL------PIEDLEKMKKKKEKPTKMVTRSNR--------- 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
QT K LDLRG R E+A +LD L A + +++IHG GTG +++ V
Sbjct: 701 ---------QTVKTELDLRGYRYEDALIELDQYLDQAVLSNFEQVYIIHGKGTGALQKGV 751
Query: 807 LEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ L+ H V + P +G TVA +K
Sbjct: 752 QQHLKRHKSVKTFRGGMPSEGGFGVTVASLK 782
>gi|255281368|ref|ZP_05345923.1| DNA mismatch repair protein MutS [Bryantella formatexigens DSM
14469]
gi|255268325|gb|EET61530.1| MutS2 family protein [Marvinbryantia formatexigens DSM 14469]
Length = 792
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 252/830 (30%), Positives = 396/830 (47%), Gaps = 123/830 (14%)
Query: 17 LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+EE + L +TS AL+M+ Q + S + +I G L G +LSP+E+ A+ R L
Sbjct: 40 IEEIRMLQAETSLALSMLYQKGHVSFSGVTNIRGSLKRLEVGSILSPAELLAICRLLEVT 99
Query: 76 NNV----WKKLTE----AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
N V K+ +E A ++ ++LQ +PL ++ C L EE I
Sbjct: 100 NRVKAYSRKENSEEEPNALDVMFEALQPLTPLANEIRRC--LPSEEE------------I 145
Query: 128 LDRASEDLELIR-AERKRN---MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
D AS L IR A R+ N L+S++ A Q ++T R R C+ +K
Sbjct: 146 SDDASPALRSIRRAMRQMNDKVHAQLNSMVNGSAKAYLQ-----DAVVTMRNGRYCLPVK 200
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
A ++ + G+ + SS+G+T F+EP ++ NN L E E IL+ L+ +
Sbjct: 201 AEYRGQV-QGMIHDQSSTGSTLFIEPMAVIKLNNELRELEIKEEKEIEVILANLSGQAGV 259
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+ ++ + + ++D FARA ++ DG P+L++ INI+ +HPLL
Sbjct: 260 EQEALESNLTLLTKLDFIFARAQLSKSYDGSEPVLNNHG------VINIKKGRHPLL--- 310
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+ TV VPIDI++ + +++ITGPNTGG
Sbjct: 311 ---------------------DKKTV-----------VPIDIRLGQDFDLLIITGPNTGG 338
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KT+GL +LM ++GL++PA + L FD + ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 KTVSLKTVGLFTLMGQSGLHIPAFDGSELAVFDDVFADIGDEQSIEQSLSTFSAHMTNIV 398
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
IL+ + SLVL DE+G+GTDP+EG ALA ++L L + + TTHY++L
Sbjct: 399 SILKEANERSLVLFDELGAGTDPTEGAALAIAVLSNLHRQGIRTMATTHYSELKVFALST 458
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
EN EF++ETLRPTYR+L G G SNA I+ +G II+ A++ Q
Sbjct: 459 PGVENGCCEFNVETLRPTYRLLIGIPGKSNAFAISAKLGLPEDIIEEARE---------Q 509
Query: 544 QHRKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ E ++SL+ + R +E + EI L + +E + + LD + +
Sbjct: 510 LSQQDEDFESLISDLETSRVTIEREREEINHYKEEIERLKQRLEQKQETLDASRERILRE 569
Query: 600 ETQQVQQELNFAKVQIDTVVQDFE---NQLRDASA-DEINSLIKESESAIA---AIVEAH 652
+Q L AK DT +++F Q D+ A ++ S ++E S++ AI
Sbjct: 570 ANEQAHAILREAKEYADTTIKNFNKFGKQGIDSRAMEQERSRLREKMSSVEKNLAIKTQR 629
Query: 653 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
P + + G+ V V S+ K TV +P + VQ G +R +V
Sbjct: 630 APAKTLQAKDLH-------LGDSVRVLSMNLK-GTVSTLPNAKGDLFVQMGILRSQV--- 678
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG-SSNEEASYGPRVQTSKNSLDLRGMRV 771
NI+ + K + AP Q+GS ++ AS G + +L G
Sbjct: 679 NIKDL--EKIADVETAAPY------KHQTGSGKIKMSKSASVGTEI-------NLLGKTT 723
Query: 772 EEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+EA +LD L A + ++HG GTG +++ V LR V Y
Sbjct: 724 DEAIAELDKYLDDAYLSHMPSVRIVHGKGTGALRKAVHNYLRRQKYVESY 773
>gi|260437715|ref|ZP_05791531.1| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
gi|292809738|gb|EFF68943.1| DNA mismatch repair protein MutS [Butyrivibrio crossotus DSM 2876]
Length = 791
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 240/825 (29%), Positives = 394/825 (47%), Gaps = 97/825 (11%)
Query: 25 NQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE 84
+ T+A+ + L S + DI ++ S G L SE+ +V L + + +
Sbjct: 49 DTTAASSRIFAKGSLGFSGLTDIRPLIKSLEVGSSLGISELLSVAALLSVTGSAIRYDSN 108
Query: 85 AAELDGDSL-QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK 143
+ E + D L +R++ L N L+++ +I CI + I D AS +L+ IR ++K
Sbjct: 109 SIETNTDVLSERFNML-------NPLSDILNEINRCIISETEI-ADDASTNLKDIRRQQK 160
Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
E + S L + + ++ + ++T R R CV +KA ++ +P G+ + S++G+
Sbjct: 161 NVNERIKSELSHMISGSYRTY-LQDAVVTTRDGRYCVPVKAEYRSQVP-GMIHDQSNTGS 218
Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
T+F+EP V+ NN L E E + ILS L+A E+ D + E+D FA
Sbjct: 219 TFFIEPMSIVKLNNDLRELEIKESEEISVILSSLSAMAGNYTTELLTNYDILKELDFIFA 278
Query: 264 RAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVE 323
+AGF+ G PI+ D INI+ +HPL+ S +
Sbjct: 279 KAGFSHSYKGSEPIMDC------DGKINIKKGRHPLIDSSKV------------------ 314
Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
VP+DI + ++ITGPNTGGKT ++KT+GL SLM ++GL+
Sbjct: 315 -----------------VPVDIYLGDGYEQLIITGPNTGGKTVTLKTIGLFSLMGQSGLH 357
Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
+PA ++ +L F+ I ADIGD QS+EQ+LSTFS H+ IV IL+ SLVL DE+ +G
Sbjct: 358 IPASDNSKLTVFNDIFADIGDEQSIEQSLSTFSSHMKNIVYILKKADSNSLVLFDELCAG 417
Query: 444 TDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYR 503
TDP+EG ALA SIL+ L + + TTHY++L ENA EF + +L PTYR
Sbjct: 418 TDPTEGAALAISILRTLHSKKITTIATTHYSELKIYALSTDGVENACCEFDVASLAPTYR 477
Query: 504 ILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLES 563
+L G G SNA I+ +G +II+ A+ + + ++ L + R +E
Sbjct: 478 LLIGIPGKSNAFAISGKLGLPSEIIENAKANIGTSAKAFE-----DVISDLEKSRVTIEK 532
Query: 564 QARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE 623
+ EI +L ++ + + LD ++ + K ++ L AK D ++DF
Sbjct: 533 EQAEIELYKKEIEELKNRLKIKTERLDEKSDSIIEKAREEADAILREAKETADETIRDFN 592
Query: 624 NQLRD--------ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
++ A + I ++++ + A A++P V +N ++ G++
Sbjct: 593 KAAKNGMTIQDLEAGRERIRKQLEKTNAKKA----ANKP-----VQTSNHTAADFHIGDK 643
Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
VHV S+ D TV +P + V G + +V NI+ + K A+ +L
Sbjct: 644 VHVISM-DLDGTVHTLPDSKGFLTVSMGILNSKV---NIKDLIILKE---ASETEKLN-- 694
Query: 736 QEDRQSGSAG-SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLF 792
+++SG N+ AS P + +L GM +EA LD L A S +
Sbjct: 695 --NKKSGIGKLKMNKTASISPEI-------NLIGMTSDEAIIALDKYLDDAFLAHISPVR 745
Query: 793 VIHGMGTGVVKERVLEILRNHPRVAKYEQES--PMNYGCTVAYIK 835
++HG G+GV++ V L+ V + + +YG T+A K
Sbjct: 746 IVHGKGSGVLRNAVHNYLKRQKHVKSFRLGTFGEGDYGVTIAEFK 790
>gi|255975938|ref|ZP_05426524.1| DNA mismatch repair protein mutS [Enterococcus faecalis T2]
gi|307278476|ref|ZP_07559550.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0860]
gi|255968810|gb|EET99432.1| DNA mismatch repair protein mutS [Enterococcus faecalis T2]
gi|306504819|gb|EFM74015.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0860]
Length = 788
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 250/844 (29%), Positives = 402/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QAWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGVELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ AP Q+E + + S E + G + LDLRG R E
Sbjct: 684 DMTPV-----------AP----QKEAKPRVTTVRSAESSHVGTQ-------LDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L++H V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKHHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|333370261|ref|ZP_08462275.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
gi|332978201|gb|EGK14933.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
Length = 784
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 244/809 (30%), Positives = 391/809 (48%), Gaps = 90/809 (11%)
Query: 18 EESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
+E Q++L T+ A+ +++ + L L + DI L A G LL+ E+ V T A
Sbjct: 41 DEVQRMLQSTAEAIDLLRLKGNLSLEAVSDIHPALQRARIGGLLTSVELLRVAGTAGAEE 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
V L E + D L L LK L I ID + D AS +L
Sbjct: 101 TVCSVL-EGMDPDETPLPLLRELSGQLKETRILAR---TIRGAIDEDGAVT-DDASPELG 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDK----PLITKRRSRMCVGIKASHKYLLPD 192
IR RN+ L ++ + + K P+IT+R R + +K ++ +
Sbjct: 156 RIR----RNIRQLQGAIRTTLDEFLRHSQYQKMLQDPIITQRNDRYVIPVKQEYRGAV-R 210
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + S+SG T F+EP+ V NN L E E IL LTAE+A +++ +
Sbjct: 211 GIVHDQSASGQTLFIEPQAVVNQNNRLRELELEEEREVERILGELTAEVADKADDLESNL 270
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ ++DL A+A + M G+ P V+ D I ++ +HPL+
Sbjct: 271 SVLTQLDLILAKARLGKRMKGIVP------GVNMDGFIRLKRARHPLI------------ 312
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
P+K VP D+++ E R +VITGPNTGGKT ++KT+G
Sbjct: 313 ----PMKE-------------------AVPNDVELGREQRAIVITGPNTGGKTVTLKTVG 349
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L +LM+++GL +PA+ L F + ADIGD QS+EQNLSTFS H++ IV IL+ +
Sbjct: 350 LLALMAQSGLPIPAEEESDLAIFTGVYADIGDEQSIEQNLSTFSSHMTNIVHILDSMDEN 409
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP+EG ALA S+L+ + ++ V TTHY +L NA+ E
Sbjct: 410 SLVLLDELGAGTDPTEGAALAISVLERVLEQGCRVVATTHYNELKLYAHAREGVINASVE 469
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F +E+L PTYR+L G G SNA I++ +G ++IQ A+ + +++R E+
Sbjct: 470 FDVESLSPTYRLLTGVPGRSNAFEISRRLGLPEEVIQAAKSQL-----SSEENRLEEMIG 524
Query: 553 SLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAK 612
+L E+RR+ E + R A +L + L ++++ + + DR ++ ++ + ++ AK
Sbjct: 525 ALSEDRRRAEKERREAEALRQQAEALLQDLKLKMESWDREKERIRESARREAKTIVSRAK 584
Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
+ D V++ R+ + + E++ + E P+ + S S+ +
Sbjct: 585 READAVLEQLRRWARERPGELKEHRLIEAKKRL----EDAEPETPTAQSVDRESTRQIRV 640
Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 732
G++V V++LG K V++ G+ + VQ G M+++V + + + +P
Sbjct: 641 GDEVLVRTLGQK-GQVIDQLGERE-FQVQVGIMKMKVGREQL--------EWKGSPP--- 687
Query: 733 RKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSV 790
QE G SY R + LDLRG VEEA ++D L A
Sbjct: 688 ---QESPDKGG-------TSYRRRSDQVRPELDLRGRMVEEAIPEIDKYLDDALLTGFDH 737
Query: 791 LFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ +IHG GTG ++ V + L HPRV Y
Sbjct: 738 VSLIHGKGTGALRTGVRKFLDQHPRVKSY 766
>gi|227498526|ref|ZP_03928670.1| mutS2 family protein [Acidaminococcus sp. D21]
gi|226903982|gb|EEH89900.1| mutS2 family protein [Acidaminococcus sp. D21]
Length = 777
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 236/819 (28%), Positives = 389/819 (47%), Gaps = 104/819 (12%)
Query: 17 LEESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
EE + +T+ A+ ++ + + + L I DI+G++ G LL P E A++ + +
Sbjct: 40 FEEVKLSQEETAEAVRILDEGRRIPLGGITDISGLVKRTRVGSLLDPEEFKAIQDAISGM 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
++ L E +E +L RYS L + + L +++ +D K I D AS L
Sbjct: 100 LDLKAFLKEVSE-TAPALVRYSDEL------HDFSRLSKQLSSVLDEKG-NIKDTASVKL 151
Query: 136 ELIRA----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
+R R R + L LL Q + L+T R R + IK ++ P
Sbjct: 152 SGLRTGILVARNRVKDKLSDLLHDPNNQKY----FQDALVTMREDRYVIPIKQEYRLNFP 207
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI + SSSGAT F+EP V NN + E AE IL LT+ + I
Sbjct: 208 -GIVHDQSSSGATLFIEPMAVVNLNNDIKKYVLEEKAEVERILRTLTSHVGAEADHILES 266
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ V ++DL A+A +A+ + P++ H+ ++G +HPLL S+
Sbjct: 267 LAVVAQVDLISAKALYAEALGARRPMMVLDHHLRI-----VKG-RHPLLEQESI------ 314
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
VP+DI++ + ++ITGPNTGGKT ++KT+
Sbjct: 315 -----------------------------VPLDIELGQDFTTLLITGPNTGGKTVALKTV 345
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL +LM++AGL+LPA+ P F + ADIGD QS+EQ+LSTFSGH+ ++ I+ +
Sbjct: 346 GLFALMAQAGLFLPAE-EAIFPVFSGVYADIGDEQSIEQSLSTFSGHMKNMISIIREATD 404
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
LVL+DE+ GTDP+EG ALA +++++ L ++TTHY++L + +NA+
Sbjct: 405 RDLVLVDEVCVGTDPTEGAALAMAMIEHFYKAHVLTIMTTHYSELKTFAYEHEGMQNASV 464
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-L 550
EF ETLRPTYR+L G G SNA I++ +G I+ A+ + ++H E +
Sbjct: 465 EFDPETLRPTYRLLMGVPGSSNAFYISRRLGLPEDILDEARTFIN------ERHSNMERV 518
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
Q+L ERR+ ES+ +L E L +++ E L++ + K + +
Sbjct: 519 LQNLEGERREYESRKDEIETLRRETEILRNQLKAEKTRLEKSRNDILRKAREDADELYRN 578
Query: 611 AKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS------ETN 664
A+ + ++++ Q + ++ L + S A++ +FS+S
Sbjct: 579 ARRESQGILKELRAQQNLVESAKVERLAEMSRKALSK---------NFSISGRTEPEGQG 629
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK---NNIRPIPNSK 721
+S G+ V VK+LG + + V G D TV + KM V +K +P+ K
Sbjct: 630 LTSGNAAVGKVVFVKTLGQE-GKITAVNGRDVTVAIGVMKMNVSMKDCILTKAQPVSPQK 688
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 781
L+K S+GS +E + + Q + D+RG V+EA +D A
Sbjct: 689 THRT------LKK--------SSGSRHE--FFVKKAQDTSVQTDVRGKTVDEAIPDVDKA 732
Query: 782 L--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 818
+ A ++HG GTG++++ +L+ L+ HP V K
Sbjct: 733 IDDALLAGMDRFRLVHGKGTGMLRKGLLDYLKQHPNVEK 771
>gi|339448753|ref|ZP_08652309.1| MutS2 protein [Lactobacillus fructivorans KCTC 3543]
Length = 785
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 238/778 (30%), Positives = 380/778 (48%), Gaps = 95/778 (12%)
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
L+ +E+ V L A V T A LD D ++ + L + K+ N L E+ +++
Sbjct: 84 LNGTELSQVNAVLLASKRVR---TFFANLDDDKVE-LNVLYDEAKDFNDLPEISKRLQAS 139
Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMC 179
ID + LD AS +L IR E R N+ + + K Q+ + +P+IT R R
Sbjct: 140 IDEDGRV-LDSASSELRSIRREITRLETNIKTTMNKYI-HGKQSKYLSEPIITVRDGRYV 197
Query: 180 VGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTA 239
+ +K+ K GI + S+SG T ++EP+ V NN R E E ILS L+
Sbjct: 198 IPVKSEDKQKF-GGIVHDQSTSGLTLYIEPQSVVSSNNDLRRSQLDERKEIHKILSELSD 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
I + E+ ++ DL A+A FA M P +S ++HV N++ ++HPL
Sbjct: 257 MIRPYQEELMENAAQLGHFDLINAKAKFADQMHATKPSVSKENHV------NLKNVRHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + + VG+ DI++ + R ++ITGP
Sbjct: 311 I-----------------------DQKKVVGN------------DIQIGSDFRQIIITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLG+ LM+++G+++ A ++ FD + ADIGD QS+E NLSTFS H+
Sbjct: 336 NTGGKTITIKTLGINQLMAQSGIFVMANEGSQVGVFDNVFADIGDEQSIEANLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+++IL+ ++ +SL+LIDE+G+GTDP EG ALA SIL + + + TTHY +L
Sbjct: 396 DNLINILKHITNQSLILIDELGAGTDPKEGAALAMSILDKMGESGSEVLATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
N++ EF +TL+PTYR+L G G SNALNIAK +G II A L++
Sbjct: 456 GYNRPETINSSMEFDEKTLKPTYRLLLGVPGQSNALNIAKRLGLPDTIISEASSLMDSDS 515
Query: 540 PE--RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE----AKDLDRRA 593
+ R + ++ + E RKL+ + LHA++ D + D D R+A
Sbjct: 516 QDINRMIKQLTKQTKDADERARKLKVELAENERLHADLNDKLTKFTDNKDSMVNDAKRQA 575
Query: 594 AHLKAKETQQVQQEL-NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH 652
+ +K +Q + + N +VQ T EN+L DA +INSL + E +++
Sbjct: 576 NQIVSKTRRQANEIINNLHQVQKRTNQPIKENELIDAKG-KINSLEQHPELKNNRVLKRE 634
Query: 653 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ F + G+ V VKS G + +++ G D+ VQ G ++++V ++
Sbjct: 635 KAKHHF------------KEGDDVLVKSYGQR-GVLLKKMGKDNWE-VQLGILKMKVSES 680
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ K P+ R++ S+G S P +LDLRG R E
Sbjct: 681 DLEQTHKEPGKKKHTPSV--------RRTRSSGIS-------P-------TLDLRGERYE 718
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
A +LD I A + +IHG GTG +++ V+ L+ + RV ++ SP N G
Sbjct: 719 SAMQRLDRYIDSALLAGYPSVTIIHGKGTGALRKGVISYLKRNRRVKEF-GFSPANAG 775
>gi|227529705|ref|ZP_03959754.1| MutS family DNA mismatch repair protein [Lactobacillus vaginalis
ATCC 49540]
gi|227350371|gb|EEJ40662.1| MutS family DNA mismatch repair protein [Lactobacillus vaginalis
ATCC 49540]
Length = 784
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 245/805 (30%), Positives = 384/805 (47%), Gaps = 136/805 (16%)
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDR 130
L+ + K+L A L+G L + + +L+ + NF E +E+ L +++
Sbjct: 60 LKNIQPQLKRLRINANLNGTELAQITKVLQTSMSVKNFFAEFKEQQKVE-----LRVINE 114
Query: 131 ASEDLELIRAERKRNMENLD-----------------SLLKKVAAQIFQ----------A 163
+ + L I KR ++++D L+ K A+I Q A
Sbjct: 115 SVQQLITIPTITKRLIQSIDPDGRVTDEASTKLHGIRQLISKTEAEIHQRMERFTQGKNA 174
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ ++T R R V + A ++ G+ + S+SG T ++EP VE+NN RL
Sbjct: 175 KYLSDAIVTVRNDRYVVPVLARYRNKF-GGVVHDQSASGQTLYIEPAAVVEYNN---RLR 230
Query: 224 NSEIAEETAILSLL---TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSS 280
++I E+ AIL +L +A I+ EI + +D A+A FA+ P+LS
Sbjct: 231 QAQIEEKQAILEVLAELSALISPYRSEIAANAKILGHLDFINAKARFARDHKDSLPLLSP 290
Query: 281 QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP 340
D+ + I +HPL+ +P K
Sbjct: 291 ------DNQVIIRQARHPLI---------------DPQKV-------------------- 309
Query: 341 VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILA 400
V DIK+ E + +VITGPNTGGKT ++KT GL +M +AGL++PA+ + FD I A
Sbjct: 310 VANDIKIGDEYQSIVITGPNTGGKTITLKTFGLIQMMGQAGLFIPAQEGSTIAVFDNIYA 369
Query: 401 DIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL 460
DIGD QSLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA SIL Y+
Sbjct: 370 DIGDEQSLEQNLSTFSGHMENVKSILERITSRSLVLLDELGAGTDPKEGAALAMSILDYI 429
Query: 461 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 520
+ V+TTHY +L NA+ EF ETL+PTY +L G G SN + IA+
Sbjct: 430 ASKGSTVVITTHYPELKVYGYDRPGTINASMEFDQETLKPTYHLLLGIPGRSNGIEIAQR 489
Query: 521 IGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYR 580
+G ++ +I ++ LV + Q + L+E+R+ AR +++ R
Sbjct: 490 LGINQTVITESKSLVSEDSQDLNQ-----MIGELVEQRKA----AREEKERLEKLLVANR 540
Query: 581 EIE-DEAKDLDR---RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI-- 634
E + D LDR + L AK + E++ AK + D ++ QL + A +
Sbjct: 541 EKQADLTNKLDRFNEQRDSLLAKARNEANHEVSMAKKKADRIIHHLR-QLEISQAGNVKE 599
Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
N LI +++ A+ A+ HR D + NT + +HV GD A +V+ G
Sbjct: 600 NELI-DAQGALNAL---HREDPRL---KRNTVLRRAKEKHDLHV---GD--AVLVKSYGQ 647
Query: 695 DDTVL---------VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+L VQ G +R+ + +N++ I + + LRK++ ++ S+G
Sbjct: 648 QGELLSKRSKHKWEVQIGILRMEIDENDLEKISHKQ----------LRKEERAKEKVSSG 697
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVK 803
+ QTS LDLRG R E+A +L I A + S + +IHG GTG ++
Sbjct: 698 VRTTQTR-----QTSAR-LDLRGHRYEQAMSELSAFIDHALLNNLSSVTIIHGKGTGALR 751
Query: 804 ERVLEILRNHPRVAKYEQESPMNYG 828
+ E LR++PRV ++ +P N G
Sbjct: 752 KGTQEYLRSNPRVKSFDYAAPNNGG 776
>gi|332686481|ref|YP_004456255.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
ATCC 35311]
gi|332370490|dbj|BAK21446.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
ATCC 35311]
Length = 789
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 241/838 (28%), Positives = 399/838 (47%), Gaps = 114/838 (13%)
Query: 18 EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
E+ Q LN+T L + Q + + + DI + G L+ E+ + R L +
Sbjct: 41 EQIQLWLNETKDGLKIQQLCNGIPIPKLVDIHSHMKRLQIGANLNGLELSQIGRILTTTS 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
V+ E E + + Y+ + +L+ L+ L +I I + + D AS +L+
Sbjct: 101 EVYHFFDELRENEIEFYNLYTWIDQLV----ILSSLTRQIKVAI-TEDGAVTDEASPELK 155
Query: 137 LIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
IR +N E L+ L++ A+ + +IT R R + +K HK
Sbjct: 156 NIRQMIHKNERAVREKLEELIRGKNARY-----LSDSIITMRNERYVIPVKQEHKNTF-G 209
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
G+ + S+SG T F+EPK VE NN +L +E E IL+ L+AE+A +EI
Sbjct: 210 GVVHDQSASGQTLFIEPKQIVELNNHLRQLQIAERTEINRILAELSAELAPYYKEILRNA 269
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ + +D A+A F + + + P ++ ++H+ + +HPLL
Sbjct: 270 EIIGTLDFINAKADFGKNLKAIVPKINEKNHIFLKQA------RHPLL------------ 311
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
K +S+ DI + + + +VITGPNTGGKT ++KT+G
Sbjct: 312 ------------------DHDKAVSN-----DITIGEDYQTIVITGPNTGGKTITLKTIG 348
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L LM ++GL +P ++ ++ F I ADIGD QS+EQNLSTFS H++ IV I+E V +
Sbjct: 349 LLQLMGQSGLPIPVNDNSQIGIFKEIFADIGDEQSIEQNLSTFSSHMTNIVSIIEKVDKN 408
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP EG ALA SIL L + + TTHY +L + NA+ E
Sbjct: 409 SLVLLDELGAGTDPQEGAALAISILDALNTKQAYTIATTHYPELKIYGYNRSGTINASME 468
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F+++TL PTYR+L G G SNA +I+K +G + KII A++++ E +E+
Sbjct: 469 FNIDTLSPTYRLLIGVPGRSNAFDISKRLGLNTKIIDEARQIMNGDSQEL-----NEMIA 523
Query: 553 SLMEERRKLESQAR-------TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
L R+ E++ + A L E+ ++YR + E ++ +A ++ Q
Sbjct: 524 DLENRRKMAETEYKEARYFLNEAEQLQTELKEVYRYLHQERENEMEKANKQANSIVKKAQ 583
Query: 606 QELN-----FAKVQIDTVVQDF--ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
+E + K+Q++T Q E+QL DA N ++++E + +
Sbjct: 584 EEADAIIKEIRKMQLNTNQQTTIKEHQLIDAKIKLSN--LQQTEEHL----------EKN 631
Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
V + + G++V V++ G + ++ D + VQ G +++ V + ++ I
Sbjct: 632 KVLKKAKAKKQLNAGDEVIVETYGQHGTLLKKL--DKEHWQVQLGILKMPVAEEDL-TIV 688
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
+ + P P LR +E S+ P + LD+RG R EEA ++
Sbjct: 689 TAVNEQEQRPMPTLRSSKE--------------SHVP------SQLDVRGKRYEEAMVEV 728
Query: 779 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
D L A S + ++HG GTG ++E + L+NH VA + +P N G A I
Sbjct: 729 DQYLDSAILAGYSQVTIVHGKGTGALREGITNDLKNHRSVASF-AFAPANQGGNGATI 785
>gi|403046921|ref|ZP_10902390.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus sp. OJ82]
gi|402763617|gb|EJX17710.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus sp. OJ82]
Length = 782
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 223/808 (27%), Positives = 393/808 (48%), Gaps = 103/808 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I+ ++ A G +L+ SE+ ++R ++ + N +K + L+ + Y L
Sbjct: 65 LSGLAKISSFIHRATIGGVLNVSELNVIKRLIQ-IQNQYKTFYNSL-LNEEEEINYPILN 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
+ ++ L+ L + I C + D AS +L+ IR++ + + + L K+
Sbjct: 123 DRMEQLPVLSNLYQNI--HQKCDAYDLFDDASYELQGIRSKISKTTQRIKQNLDKIVKHQ 180
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +KA ++ +GI + S+SG T ++EP VE +N
Sbjct: 181 GNQKKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSIVEMSNQIS 239
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILS 279
N E E IL+ LT ++A+ E + + + ++ +ID A+A +A+ + G P +
Sbjct: 240 SFRNDEAVERERILTELTVQVAE-EADACLISESIMGQIDFLTAKARYARSIKGTKPEFT 298
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
+ D ++ + HPLL +S+ +N+ D+E
Sbjct: 299 T------DRTVYLPKAFHPLLDRTSV------VANTIEFAQDIE---------------- 330
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
V+ITGPNTGGKT ++KTLGL M+++G+ +P + +L F+ +
Sbjct: 331 -------------TVIITGPNTGGKTVTLKTLGLIIAMAQSGMLIPTLDGSKLSIFENVY 377
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
DIGD QS+EQ+LSTFS H+ IV+IL+ ++ SL+L DE+G+GTDPSEG ALA SIL +
Sbjct: 378 CDIGDEQSIEQSLSTFSSHMKNIVEILQDATKNSLILFDELGAGTDPSEGAALAMSILDH 437
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + L + TTHY +L NA+ EF + TL PTY++L G G SNA +I+K
Sbjct: 438 VHEIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISK 497
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G + ++IQ+A+ ++ + + +E+ SL ++++ Q E+ L
Sbjct: 498 KLGLNMQVIQKAKSMI-----GQDEQEINEMIASLEHNSKRVDEQ-------RIELDQLV 545
Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ---DFENQLRDASADEINS 636
RE ++ L ++ A + E Q + + A ++ + + D +LRD D+ +
Sbjct: 546 REAQEARDALAKQYAQYQNYEKQLLSEAKEKANQRVKSATREADDILKELRDLR-DKKGA 604
Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEV 691
+KE E I + + +D + + ++ G++V V + G K V+E+
Sbjct: 605 DVKEHE----LIDKKKQLEDQYEAKSLKQNVQKQKWDEIKAGDEVKVLTYGQK-GEVLEL 659
Query: 692 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 751
GD + V VQ G +++++ P+ + ++ P ++E RQS
Sbjct: 660 IGDKEAV-VQMGIIKMKL------PLEDLEKTKKTKETPAKMIKRESRQS---------- 702
Query: 752 SYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEI 809
K LDLRG R +EA +D L A + +++IHG GTG +++ V +
Sbjct: 703 --------IKMELDLRGYRYDEAMVAVDQYLDQAVLSNYEQVYIIHGKGTGALQKGVQKH 754
Query: 810 LRNHPRVAKYEQESPM--NYGCTVAYIK 835
L+ H V+ Y P +G TVA +K
Sbjct: 755 LKRHKSVSSYRNGMPSEGGFGVTVAELK 782
>gi|138896257|ref|YP_001126710.1| recombination and DNA strand exchange inhibitor protein
[Geobacillus thermodenitrificans NG80-2]
gi|189030428|sp|A4IRL1.1|MUTS2_GEOTN RecName: Full=MutS2 protein
gi|134267770|gb|ABO67965.1| DNA mismatch repair protein [Geobacillus thermodenitrificans
NG80-2]
Length = 784
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 248/829 (29%), Positives = 393/829 (47%), Gaps = 107/829 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
L+E L +T A A+++ + PLD + DI L A G +LSP E+ V T
Sbjct: 40 LDEVAVWLEETDEAAAVLRLRGYVPLD--GVVDIRSHLKRAAIGGVLSPIELLEVAATA- 96
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
A + K+L + + L R + + L LEE I ID + LD AS+
Sbjct: 97 AASRQMKQLIMSLHDEHGGLARLADYADELAEV---PALEEDIRRSIDDHGEV-LDTASD 152
Query: 134 DLE----LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IRA R E L+S+++ +AQ + +IT R R + +K ++
Sbjct: 153 RLRSLRGQIRAAEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYRSA 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+ + +K
Sbjct: 209 Y-GGIVHDQSASGATLFIEPQVVVELNNALREARAKEKQEIERILRELSAKVAEHDEPLK 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
++ + D FA+A +A+ + P ++++ ++ F + +HPL+
Sbjct: 268 RAVEALAHFDFLFAKAKYARRLQAAKPAVNNRGYLRFLQA------RHPLI--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
D VP DI + + +VITGPNTGGKT ++K
Sbjct: 313 --------------------------DQDKAVPNDIVLGGDYTTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL ++M++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL V
Sbjct: 347 TVGLLTIMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
ESLVL DE+G+GTDP EG ALA +IL + R V TTHY +L NA
Sbjct: 407 DEESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVVNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA +++ + H
Sbjct: 467 SVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERA-----KVQVSAESHSVEN 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL +++ E A S E L E E + ++L+ + A A+ Q+ +
Sbjct: 522 MIASLERSKKQAEEDEARAHSAREEAERLRAEWEQKLEELEDKKAEQLAEAAQKATDIIR 581
Query: 610 FAKVQIDTVVQDFENQLRDASAD-EINSLI--KESESAIAAIVEAHRPDDDFSVSETNTS 666
A+ + + ++ + ++ A+ + + LI K+ +A +VE ++ T+
Sbjct: 582 AAEREAERIINELRRLQKEKQAEVKEHELIAAKQRLAAAVPVVEK------RKKTKKATA 635
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
Q G++V V SL K + +V +D VQ G +++++ + ++ I ++ K
Sbjct: 636 RHAFQSGDEVKVTSLNQKGYLLEKV--SEDEWQVQLGILKMKIHERDLEYIGSAPAKE-V 692
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P ++ G S LDLRG R E+A +L D
Sbjct: 693 TPIATVK--------------------GKDAHVSLE-LDLRGERYEDALVRLEKYIDDAV 731
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
LA + S +IHG GTG +++ V + L+ H R K + N G T
Sbjct: 732 LAGYPRVS---IIHGKGTGALRQGVQQFLKQH-RAVKSFRFGAANEGGT 776
>gi|18310863|ref|NP_562797.1| recombination and DNA strand exchange inhibitor protein
[Clostridium perfringens str. 13]
gi|38604940|sp|Q8XJ80.1|MUTS2_CLOPE RecName: Full=MutS2 protein
gi|18145545|dbj|BAB81587.1| DNA mismatch repair protein [Clostridium perfringens str. 13]
Length = 786
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 224/719 (31%), Positives = 351/719 (48%), Gaps = 87/719 (12%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D AS+ L IR R+++ +S ++ I ++ + L T R R + +KA
Sbjct: 145 IADSASDKLYSIR----RSLKEKNSSIRDKVNSIVRSNTQYLQDSLYTVRGDRYVIPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL+ L+ + K+
Sbjct: 201 EYKSQVP-GLVHDQSSTGATLFIEPTALVNLNNEIKELMLKERAEIERILAELSVLVYKN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK + ++E+D FA+A + + G PI++ + I++ +HPL+
Sbjct: 260 IDVIKVNFNIIVELDFIFAKAKYGSDLGGTLPIVNEEG------VIDLMDARHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
P D V DI + E ++ITGPNTGGK
Sbjct: 310 ------------P-------------------KDKVVSSDIYLGREFSTLLITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT GL LM +GL +PA + + +F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTTGLIELMGLSGLLIPASENSSISFFEEIFADIGDEQSIEQSLSTFSSHMTNIVR 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+E + +S VL DE+G+GTDP+EG ALA SIL+ LR R + TTHY++L K
Sbjct: 399 IMEKANNKSFVLFDELGAGTDPTEGAALAISILENLRARGCRIMSTTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF++ETLRPTYR+L G G SNA I++ +G +I+ A+K++ E L+ E
Sbjct: 459 NVENASVEFNVETLRPTYRLLIGVPGKSNAFEISRRLGLKDNVIEEAKKVISTESLQFE- 517
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+L QSL E+ K E+ AR AA L + +++ + ++ ++ A +
Sbjct: 518 ------DLIQSLQEKSIKAENDAREAAILRNDAEKYKNRYKEKFERIESVRDNVYADARR 571
Query: 603 QVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ +Q L+ AK + D ++++ + R S+D L E I +A
Sbjct: 572 EAKQILDSAKEEADAILKNMRDLERMGISSDARRKLEAERGKLRDKISDAEARLQKKKEE 631
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR-PIPNS 720
+ + G + + S+ K+ V+ P + V VQ G M++ VK ++R
Sbjct: 632 QKGEELKKIEVGMEALLPSINQKV-IVLSKPDNKGEVQVQAGIMKINVKAKDLRVAKETK 690
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ K RL +Q D P S+DLRGM EEA + D
Sbjct: 691 EEKKIKKREARLNLRQVD----------------P-------SIDLRGMDSEEACYTADK 727
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A R + ++HG GTGV+++ + ++L+ HP V + + G TV +K
Sbjct: 728 YLDDAYVAGRGEVTLVHGKGTGVLRKAINDMLKKHPHVKSHRLGEYGEGGTGVTVVILK 786
>gi|379727500|ref|YP_005319685.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
DAT561]
gi|376318403|dbj|BAL62190.1| recombination inhibitory protein MutS2 [Melissococcus plutonius
DAT561]
Length = 789
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 242/838 (28%), Positives = 401/838 (47%), Gaps = 114/838 (13%)
Query: 18 EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
E+ Q LN+T L + Q + + + DI + G L+ E+ + R L +
Sbjct: 41 EQIQLWLNETKDGLKIQQLCNGIPIPKLVDIHSHMKRLQIGANLNGLELSQIGRILTTTS 100
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
V+ E E + + Y+ + +L+ L+ L +I I + + D AS +L+
Sbjct: 101 EVYHFFDELRENEIEFYNLYTWIDQLV----ILSSLTRQIKVAI-TEDGAVTDEASPELK 155
Query: 137 LIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
IR +N E L+ L++ A+ + +IT R R + +K HK
Sbjct: 156 NIRQMIHKNERAVREKLEELIRGKNARY-----LSDSIITMRNERYVIPVKQEHKNTF-G 209
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
G+ + S+SG T F+EPK VE NN +L +E E IL+ L+AE+A +EI
Sbjct: 210 GVVHDQSASGQTLFIEPKQIVELNNHLRQLQIAERTEINRILAELSAELAPYYKEILRNA 269
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ + +D A+A F + + + P ++ ++H+ + +HPLL
Sbjct: 270 EIIGTLDFINAKADFGKNLKAIVPKINEKNHIFLKQA------RHPLL------------ 311
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
K +S+ DI + + + +VITGPNTGGKT ++KT+G
Sbjct: 312 ------------------DHDKAVSN-----DITIGEDYQTIVITGPNTGGKTITLKTIG 348
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L LM ++GL +P ++ ++ F I ADIGD QS+EQNLSTFS H++ IV I+E V +
Sbjct: 349 LLQLMGQSGLPIPVNDNSQIGIFKEIFADIGDEQSIEQNLSTFSSHMTNIVSIIEKVDKN 408
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP EG ALA SIL L + + TTHY +L + NA+ E
Sbjct: 409 SLVLLDELGAGTDPQEGAALAISILDALNTKQAYTIATTHYPELKIYGYNRSGTINASME 468
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F+++TL PTYR+L G G SNA +I+K +G + KII A++++ E +E+
Sbjct: 469 FNIDTLSPTYRLLIGVPGRSNAFDISKRLGLNTKIIDEARQIMNGDSQEL-----NEMIA 523
Query: 553 SLMEERRKLESQAR-------TAASLHAEIMDLYR----EIEDEAKDLDRRAAHLKAKET 601
L R+ E++ + A L E+ ++YR E E+E + +++A + K
Sbjct: 524 DLENRRKMAETEYKEARYFLNEAEQLQTELKEVYRYFHQERENEMEKANKQANSIVKKAQ 583
Query: 602 QQVQQELN-FAKVQIDTVVQDF--ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
++ + K+Q++T Q E+QL DA N ++++E + +
Sbjct: 584 EEADAIIKEIRKMQLNTNQQTTIKEHQLIDAKTKLSN--LQQTEEHL----------EKN 631
Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
V + + G++V V++ G + ++ D + VQ G +++ V + ++ I
Sbjct: 632 KVLKKAKAKKQLNAGDEVIVETYGQHGTLLKKL--DKEHWQVQLGILKMPVAEEDL-TIV 688
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
+ + P P LR +E S+ P + LD+RG R EEA ++
Sbjct: 689 TAVNEQEQRPMPTLRSSKE--------------SHVP------SQLDVRGKRYEEAMVEV 728
Query: 779 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
D L A S + ++HG GTG ++E + L+NH VA + +P N G A I
Sbjct: 729 DQYLDSAILAGYSQVTIVHGKGTGALREGITNDLKNHRSVASF-AFAPANQGGNGATI 785
>gi|308174555|ref|YP_003921260.1| DNA mismatch repair enzyme [Bacillus amyloliquefaciens DSM 7]
gi|307607419|emb|CBI43790.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens DSM
7]
Length = 785
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 244/835 (29%), Positives = 406/835 (48%), Gaps = 105/835 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LADIQKQLDEVEEASAIMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG S+ PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVSI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIVQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P ++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDSIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYTTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDHVFADIGDEQSIEQSLSTFSSHMVNIVSILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I++ +G II +A+ + +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521
Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
SL + +++ + + S+ E L++E++ + +L+ + L + Q+ ++L
Sbjct: 522 MIASLEKSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKLMEEAEQKAAEKLE 581
Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
A + + ++++ + + R E+ K A+ A ++ +P+
Sbjct: 582 DAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPERKTE----KKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K A ++E G+ + VQ G ++++VK+ ++ + ++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA-SH---QLDIAL 782
P P+ K A ++ + Y ++ LDLRG R E A SH LD A+
Sbjct: 688 -PEPKKEK---------AITAVKGKDYHVSLE-----LDLRGERYENALSHVEKYLDDAV 732
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
R + +IHG GTG +++ V ++L+NH V +++ + G T+ +K
Sbjct: 733 LAGYPR--VSIIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK 785
>gi|452990484|emb|CCQ98332.1| MutS2 protein [Clostridium ultunense Esp]
Length = 829
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 251/800 (31%), Positives = 396/800 (49%), Gaps = 118/800 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSL---QRYS 97
L I DI + A G +LSP E + TL A + L E A D +SL + Y+
Sbjct: 108 LGGIHDIRPSIRRARMGGVLSPQEFLDLADTLAAGRRLKHFLLELA--DKESLPILKEYA 165
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR----NMENLDSLL 153
+E LKN LE KI ID + +LD AS L IRAE K E LD ++
Sbjct: 166 ERIEGLKN------LETKIHGTID-EYGEVLDGASPLLRKIRAEIKGLESGIKERLDRMV 218
Query: 154 KKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 213
K + Q I + ++T R R + +K ++ G+ + S+SGAT F+EP+ V
Sbjct: 219 KDPSYQKM----IQEQIVTLRNGRYVIPVKQEYRTAF-GGLVHDQSASGATLFIEPEAVV 273
Query: 214 EFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
NN L ++++ EE I L LT A+ + ++ + E+D F +A +A
Sbjct: 274 RLNN---ELRDAKLKEEKEIERILRELTHTTAEEADALSVNVESLAELDFIFTKAKYALS 330
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
+ PIL + + + +HPL+ +
Sbjct: 331 IKASRPILKRKKAIKLKKA------RHPLIPKEKV------------------------- 359
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VPID++V ++VITGPNTGGKT ++KT+GL +LM++AGL +PA
Sbjct: 360 ----------VPIDVEVGDSFTMLVITGPNTGGKTVTLKTIGLMTLMAQAGLQIPAGEGS 409
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
+ F + ADIGD QS+EQ+LSTFS H++ IV I+E ++ +SL+L+DE+G+GTDP+EG
Sbjct: 410 EVAVFSQVFADIGDEQSIEQSLSTFSSHMTHIVKIIEEMTPDSLILLDELGAGTDPTEGA 469
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA +IL+ L R V TTHY++L NA+ EF +ETL PTYR+L G G
Sbjct: 470 ALAIAILEELYRRDARVVATTHYSELKVYAYNHPGVMNASVEFDVETLSPTYRLLLGIPG 529
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
SNA IA+ +G ++II +A+ V+ E +Q + +L E R++ E + A
Sbjct: 530 RSNAFLIAERLGLPKEIIDKARGQVDEESRELEQ-----MITNLAESRKEAEMKREEAER 584
Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
+ E++ L +++E + L+R L + ++ ++ + A+ + + V+Q +LR
Sbjct: 585 IQEEMVRLRNSLQEEKERLERERDRLLREAAREAEEVVKKARREAEEVIQ----ELRRLG 640
Query: 631 ADEINSLIKESESAIAAIVEA-HRPDDDFSVSETN--------TSSFTPQFGEQVHVKSL 681
+E + IKE ++EA R D+ + ET +S + G++V+V SL
Sbjct: 641 EEE-GARIKEHR-----LIEAKKRLDEAIPILETGRRERGDVPSSPHGLKAGDEVYVHSL 694
Query: 682 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 741
K V+E G+D+ LVQ G ++ ++ ++ +++E+ ++
Sbjct: 695 KLK-GIVLEALGEDE-YLVQVGILKTKLNGRDL-------------------EKREEEKT 733
Query: 742 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 799
+ A+ RV+T LDLRG VEEA LD L A + +IHG+GT
Sbjct: 734 RHEKAVIRTANRRERVRT---ELDLRGQTVEEALIHLDRYLDEALLAGLHQVTIIHGLGT 790
Query: 800 GVVKERVLEILRNHPRVAKY 819
G +K V + LR+H V +Y
Sbjct: 791 GALKRAVQDYLRSHRNVERY 810
>gi|347534558|ref|YP_004841228.1| MutS2 protein [Lactobacillus sanfranciscensis TMW 1.1304]
gi|345504614|gb|AEN99296.1| MutS2 protein [Lactobacillus sanfranciscensis TMW 1.1304]
Length = 785
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 231/777 (29%), Positives = 379/777 (48%), Gaps = 102/777 (13%)
Query: 63 SEICAVRRTLRAVNNVWKKL-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
+++ AV + +N ++ L TE EL L E +K + L E+ ++ +D
Sbjct: 90 AQVSAVLNAILVINRFFENLETEKVEL--------HVLYEEVKTFSNLPEITVQLKKSVD 141
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
I LD AS L IR + R N+ S ++ Q+ + P+IT R R +
Sbjct: 142 DSGKI-LDSASGTLSSIRRQISRLEGNIKSKMESFTHG-KQSKYLSDPIITIRDDRYVIP 199
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KA +K + GI + S+SG T ++EP V NN R +E EE IL+ L+ I
Sbjct: 200 VKAEYKQKI-GGIVHDQSTSGQTIYLEPASVVGLNNDLRREQINEREEEKRILAQLSDLI 258
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
+ E+ ++ DL A+A +A M P +S D+ +N++ +HPL+
Sbjct: 259 RPYQMELLSNAKQLGHFDLINAKARYAASMKATRP------EISADNQVNLKNARHPLI- 311
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
N E VG+ DIK+ + R ++ITGPNT
Sbjct: 312 ----------------------NQEKVVGN------------DIKLGFDYRQIIITGPNT 337
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT +MKTLGL LM+++GL++ A + +D + ADIGD QS+EQNLSTFS HI
Sbjct: 338 GGKTITMKTLGLLQLMAQSGLFITADEGSQAGLYDEVFADIGDDQSIEQNLSTFSSHIDN 397
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
I+ IL+ ++ SLVLIDE+G+GTDP EG ALA SIL + + TTHY +L
Sbjct: 398 IISILKRMTNRSLVLIDELGAGTDPREGAALAMSILDAISQSDAEVLSTTHYPELKVYGY 457
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER---- 537
NA+ EF +TL PTYR++ G G SNAL+IA +G + II A+ LV+
Sbjct: 458 NRPETINASMEFDEKTLSPTYRLMIGIPGQSNALSIAGRLGLNESIIMEAESLVDEDSQD 517
Query: 538 ----LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
++ QQ + ++ + RKLE + + LH E+ + + + +RR
Sbjct: 518 INSMIKKLTQQTKAAD------DRARKLEVELKIVTELHQELTEKFNQF------TERRD 565
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
A + K + Q ++ K Q + ++ D + ++A+ D + + E + I A+ E H
Sbjct: 566 AMIN-KAKRDANQIVSRTKRQANEIIDDLHKRQKNAAIDVKENELIEQKGKINAL-EQHT 623
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
+ V + + + + + G+ V VK+ G + + ++ + + V+ G ++++V + +
Sbjct: 624 ELKNNKVLKRSKAKKSFKVGDDVLVKTYGQRGVLLKKI--GNHSWEVELGILKMKVDETD 681
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
+ + K P+ R Q ++ S+ +S P +LDLRG+R ++
Sbjct: 682 MDRVKEEK--------PKHRAQTVVHRTRSSSTS-------P-------TLDLRGVRYDD 719
Query: 774 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
A +LD I A + +IHG GTG +++ V+ LR + +V ++ SP N G
Sbjct: 720 AMQRLDRYIDSALLAGYPSVTIIHGKGTGALRKGVINYLRGNRQVKEF-GFSPANSG 775
>gi|294501473|ref|YP_003565173.1| DNA mismatch repair protein MutS [Bacillus megaterium QM B1551]
gi|294351410|gb|ADE71739.1| DNA mismatch repair protein MutS [Bacillus megaterium QM B1551]
Length = 787
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 257/841 (30%), Positives = 402/841 (47%), Gaps = 126/841 (14%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ + L + + PL I D+ + A G LS +E+ V T+ A V K
Sbjct: 47 QEATDEATTVLRLRGNVPL--GGIFDVRSSVKRAEIGGTLSSNELLDVASTIYAARQV-K 103
Query: 81 KLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ E D D LQ P++ E ++ L E+E+ I ID +LD AS+ L IR
Sbjct: 104 QFIEQVVEDED-LQL--PIITEHIEKLMPLPEVEQTIKMSIDENG-TVLDGASDQLRGIR 159
Query: 140 AERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ + R E L+SL++ +AQ + I +T R R + +K ++ GI
Sbjct: 160 QKLRSTESRIREKLESLIRSSSAQKMLSDAI----VTIRNERFVIPVKQEYRSAY-GGIV 214
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI------LSLLTAEIAKSEREIK 249
+ SSSGAT F+EP+ V NN L +++ E+ I L++ AE+A R+
Sbjct: 215 HDQSSSGATLFIEPQAIVTLNN---ELQEAKVKEKQEIERILIALTVQVAEVANELRQNV 271
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
YL+ E+D FA+ ++ + P ++ + ++ + KHPL+
Sbjct: 272 YLLG---ELDFMFAKGRYSHELKASKPKMNDRGYIKLVKA------KHPLIA-------- 314
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+ DV V DI++ + +VITGPNTGGKT ++K
Sbjct: 315 ---------QEDV------------------VANDIELGDQYTSIVITGPNTGGKTVTLK 347
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL +LM++AGL +PA + + F + ADIGD QS+EQ+LSTFS H+ IVDIL+ V
Sbjct: 348 TLGLFTLMAQAGLQIPALDGSEMAVFKHVFADIGDEQSIEQSLSTFSSHMVNIVDILQKV 407
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L NA
Sbjct: 408 DHESLVLFDELGAGTDPQEGAALAISILDQVYERGARVVATTHYPELKAYGYNREGVVNA 467
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF +ETL PTY++L G G SNA I+K +G ++I+RA+ + + ++
Sbjct: 468 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLSAEVIERAKGYI-----GSETNKVEN 522
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL + RR+ E + A L E L++E++ + + + + L K ++ Q +
Sbjct: 523 MIASLEDSRRQSEHELEEAEELRKEAQKLHKELQSQIIEFNEKRDKLYEKAEEKAQATVK 582
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD---------FSV 660
A + + ++ D LR S +L+KE E ++EA + +D
Sbjct: 583 AASEEAEKIISD----LRKMSQKNY-ALVKEHE-----LIEARKRLEDAVPTLEKSKKKP 632
Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
+ T Q G++V V S G K T+VE +++ VQ G M+++VK+ ++ I +S
Sbjct: 633 AAPKKQERTLQAGDEVKVLSWGQK-GTLVERVSNNEW-QVQMGIMKMKVKEKDLEYI-SS 689
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SH 776
+ P ++ G N E LDLRG R E A
Sbjct: 690 PKPVETKPLATVK--------GKDYHVNLE-------------LDLRGERYENALIRVEK 728
Query: 777 QLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYI 834
+D AL R + +IHG GTG +++ V E L+NH V ++ + S G TV
Sbjct: 729 YIDDALLANYPR--VSIIHGKGTGALRKGVQEYLKNHRSVKNIRFGEASEGGSGVTVVEF 786
Query: 835 K 835
K
Sbjct: 787 K 787
>gi|222151569|ref|YP_002560725.1| recombination and DNA strand exchange inhibitor protein
[Macrococcus caseolyticus JCSC5402]
gi|222120694|dbj|BAH18029.1| recombination and DNA strand exchange inhibitor protein homolog
[Macrococcus caseolyticus JCSC5402]
Length = 783
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 236/816 (28%), Positives = 386/816 (47%), Gaps = 104/816 (12%)
Query: 31 LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN---NVWKKLTEAAE 87
+ M Q++P +S + DI ++ AV G +LS E+ ++ ++ VN L E E
Sbjct: 61 IEMTQTEP-GMSMLSDIQSLVRRAVIGSVLSVVELNKIKNNIKVVNRYKTYIANLYEERE 119
Query: 88 LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME 147
L+ + Y +L + +TEL E I C + D AS L IR E R
Sbjct: 120 LEIPVM--YHKFQQLPQ----VTELAESIQS--KCDETTLFDHASPKLSEIRQEMNRINR 171
Query: 148 NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFM 207
+ L+ + + ++T R R + +++ +K P GI + SSSG T+++
Sbjct: 172 RIKERLESIVRSSNNQKKLSDAIVTIRNGRQVIPVRSEYKQDFP-GIVHDTSSSGQTFYI 230
Query: 208 EPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGF 267
EP V+ + +++ E E IL LT E+A+ + + Y D + ++D+ A+A +
Sbjct: 231 EPNSIVQLSTELSAVTHREQEEVERILYELTNEVAEYDNALTYSTDVLSDLDVLMAKAKY 290
Query: 268 AQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEM 327
V P +V ++++ G HPLL P + V+N+
Sbjct: 291 GNRNKMVMP------NVVNARTVDLPGAWHPLL----------------PADTVVKNNIS 328
Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
+G +T+ V+ITGPNTGGKT ++KT GL LM+++G+ +PA
Sbjct: 329 FIG-------------------DTQTVIITGPNTGGKTVTLKTTGLIILMTQSGMMIPAA 369
Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
+ FD + DIGD QS+EQ+LSTFS H++ IV IL+ ++ S V+ DE+G+GTDPS
Sbjct: 370 EGATISVFDEVFCDIGDEQSIEQSLSTFSSHMTNIVSILKEMTSNSFVMFDELGAGTDPS 429
Query: 448 EGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 507
EG ALA SIL ++ + + TTHY +L NA+ EF +ETL PTYR+L G
Sbjct: 430 EGAALAMSILDRCLEQNVMTMATTHYPELKAYSYNRKHVMNASVEFDIETLSPTYRLLMG 489
Query: 508 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS-ELYQSLMEERRKLESQAR 566
G SNA +IAK +G II+ A+++++ E KS E ME+ R Q +
Sbjct: 490 VPGKSNAFDIAKKLGLSPSIIKHARQMIQMDDVEIDNMIKSLESNAKQMEDDRIFTEQLK 549
Query: 567 -TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
SLH+++ + + ++L RA Q + + A+ + D +++ N
Sbjct: 550 LEVQSLHSDLKKNFDSYLAQKENLIERAK-------QDANKIVKDAEKEADELLKTLRNL 602
Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
+A E N LI E S + + + D + +T + + G+ V V S G K
Sbjct: 603 KSNADIKE-NELI-EKRSKLGEMYHETKIKAD----KKSTKNEVIEKGDHVKVLSYGQK- 655
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+++V G + +VQ G +++++ P L K+ A
Sbjct: 656 GVILDVDGKE--AIVQMGIIKMKL------------------PLDELEKE--------AP 687
Query: 746 SSNEEASYGPRV--QTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
+++ PR QT K LDLRG R E+A +L+ L A + + +IHG GTG
Sbjct: 688 PKEDKSRVVPRSNRQTIKMELDLRGERYEDALIKLEQYLDQALLSNYEQVTIIHGKGTGA 747
Query: 802 VKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+++ V + LR V+ + +P +G TV +K
Sbjct: 748 LQKGVQQYLRRSKAVSSFRGGTPSEGGFGVTVVELK 783
>gi|291544279|emb|CBL17388.1| MutS2 family protein [Ruminococcus champanellensis 18P13]
Length = 793
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 236/797 (29%), Positives = 379/797 (47%), Gaps = 88/797 (11%)
Query: 21 QKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV- 78
Q+LL T AL + +Q +ED+ L A SG +S E+ +V R L + ++
Sbjct: 43 QQLLGMTEDALQLSIQYGTPPFYQMEDVCAPLLRAKSGSRISLRELLSVARLLNQIQSLD 102
Query: 79 -WKKLTEAAELDGDSL-QRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
W E +E L R +P L EE+I D AS L
Sbjct: 103 DWYCHCENSETSLAYLFSRLAPNPALRDKLERSILSEEEIA-----------DGASTALA 151
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + ++ + L L K+ + + ++T R R + +KA H+ + G+
Sbjct: 152 SIRRKIAQSGQKLRDTLDKMIRSASMQKYLQESIVTLRDGRYVLPVKAEHRGDV-QGLIH 210
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMDRV 255
+ S++G TYF+EP VE NN ++RL S+ EE I++ L AE +
Sbjct: 211 DTSATGQTYFIEPIAIVEANN-DIRLLESQEQEEIERIITNLCAECGAYADVLIENYHVC 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
E++L FA+A A M P L+ D ++ ++ +HPLL
Sbjct: 270 AELNLYFAKANLAAKMKATLPQLTD------DGAVVLKKARHPLL--------------- 308
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P K VPID+ + E + ++ITGPNTGGKT ++KT+GL
Sbjct: 309 DPAKV--------------------VPIDVTLGREYQALIITGPNTGGKTVALKTVGLLC 348
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
M+ GL +PA + + F IL DIGD QS+EQNLSTFS H + +++IL+ +SLV
Sbjct: 349 AMAMCGLLIPAGDGSSVSVFSHILVDIGDAQSIEQNLSTFSAHTNHVIEILKTADAQSLV 408
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L+DE+GSGTDP EG ALA S+++ L+ + + TTHY +L + ENA+ EF L
Sbjct: 409 LLDELGSGTDPVEGAALAVSVIEQLKRQGAKLMTTTHYQELKLYAIETPDVENASCEFDL 468
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
ETL+PTYR+L GS G SNA I++ +G +II A+ LV +Q R + + L
Sbjct: 469 ETLQPTYRLLIGSPGKSNAFAISEHLGMPPQIIAYAKTLV-----STEQTRFESVIEKLE 523
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
R +L++Q + E + + ++ K L++ + Q Q + K++
Sbjct: 524 AARAELDTQNQQLRQARLEAQAHEQALREQLKQLEQEKDAALEQARQSAMQIIENTKIES 583
Query: 616 DTVVQDFEN----QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ 671
+ ++ + E + R+ +D ++ L ++++ A + +A P + E +
Sbjct: 584 NRLIDELEQLRHEKDRETFSDRVSQLKSRTKNSFARMHDAANPVQQ-RMQEQYKLPRPLK 642
Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
G+ V+V + DK TV+ P + V VQ G M+ +VK N+R + AA
Sbjct: 643 KGDTVYVTDI-DKQGTVLAEPDSSNMVFVQIGIMKTKVKLENLR------LQQAAKVMLN 695
Query: 732 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRS 789
+K+Q ++S S+ + A LD+RG +E +Q++ L A S
Sbjct: 696 GKKRQPAKKSVSSKVTRSAAM----------ELDIRGCAADEGVYQMEAFLDSALVSGIS 745
Query: 790 VLFVIHGMGTGVVKERV 806
+ +IHG GTGV++ V
Sbjct: 746 TVTIIHGKGTGVLRAAV 762
>gi|403070305|ref|ZP_10911637.1| DNA mismatch repair protein [Oceanobacillus sp. Ndiop]
Length = 781
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 255/829 (30%), Positives = 394/829 (47%), Gaps = 115/829 (13%)
Query: 7 QKAQIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
Q +Q+ L E +L +T A ++++ + + L I DI L + G +LS E
Sbjct: 30 QVSQLKPSTDLAEVIQLQQETDEAASIVRLDKAIPLGGITDIRESLKRSAIGGILSGEE- 88
Query: 66 CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
C L N V+ A ++ L EL+ L ELE+ I CID
Sbjct: 89 C-----LDVANTVYGGRQVKAFIENLEEPELPVLEELVDRITPLRELEQHIKSCIDDHGH 143
Query: 126 IILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
+ +D AS L IR+ R E L+S + ++ + A ++T R R +
Sbjct: 144 M-MDSASAKLRSIRSSIRTYENRIREKLESYTRNNSSMLSDA------IVTIRNDRYVLP 196
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+K ++ + GI + SSSG T FMEPK V+ NN + E E IL L+ I
Sbjct: 197 VKQEYRGTI-GGIVHDQSSSGQTLFMEPKAVVDLNNQLHEAISKEQQEIEQILKELSEHI 255
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A ER++ + + +ID FARA M P ++ + ++ + +HPL+
Sbjct: 256 ASFERDLYENVTVLGKIDFMFARAKLGNLMKASRPKINDRGYIKMQQA------RHPLI- 308
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
P+ V N D+++ +VITGPNT
Sbjct: 309 ---------------PINEVVAN-------------------DVEIGKTYTSIVITGPNT 334
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++K +GL +LM+++GL +PA + + F+ + ADIGD QS+EQNLSTFS H++
Sbjct: 335 GGKTVTLKMIGLCTLMAQSGLQIPALDGCEMAVFEEVFADIGDEQSIEQNLSTFSSHMTN 394
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IVDI++ V SLVL DE+GSGTDP EG ALA SIL + R + TTHY +L
Sbjct: 395 IVDIIKKVDYRSLVLFDELGSGTDPQEGAALAMSILDEVVSREARVIATTHYPELKAYGY 454
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
NA+ EF++ETL+PTYR+L G G SNA I+K +G D +II RA+ LV +
Sbjct: 455 NRENVVNASVEFNVETLKPTYRLLIGVPGRSNAFEISKRLGLDEQIIDRAKGLV-GADSK 513
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
+ + L +S ++ R E A + E L EI E K L+++ L K
Sbjct: 514 SVETMIASLEKSQLDAERDYEQ----AHEILLESEQLREEIMREWKQLEQKKETLYKKAE 569
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSV 660
++ ++ L+ A+ + + +V N++R N +KE E A ++E +P+ +
Sbjct: 570 EKAEKALSQAREEAELIV----NEIRQMKT---NVTLKEHEWIEAKKMLEEAQPN----L 618
Query: 661 SETNTSSFTPQFGEQVHVKSLGD--KLATV-----VEVPGDDDTVLVQYGKMRVRVKKNN 713
S + P E+ ++K GD KL TV V D+ +VQ G M+V+VK+++
Sbjct: 619 SRKQSKQTEPVAKEKQNLKP-GDEIKLLTVNQKGEVLEKVSDNEYMVQVGIMKVKVKRSD 677
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
++ + K + P ++ SN S LDLRG R E+
Sbjct: 678 LQLLGKQK-QTIQKPVATIK------------GSNFHVS---------AELDLRGERYED 715
Query: 774 ASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 817
A +L D+ LA + S +IHG GTG +++ V E ++ HP +A
Sbjct: 716 ALLKLEKYIDDVLLAGYSKAS---IIHGKGTGALRKGVQEYVKRHPHIA 761
>gi|307288101|ref|ZP_07568111.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0109]
gi|422704386|ref|ZP_16762196.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1302]
gi|306500837|gb|EFM70155.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX0109]
gi|315164284|gb|EFU08301.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecalis TX1302]
Length = 788
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 250/844 (29%), Positives = 400/844 (47%), Gaps = 133/844 (15%)
Query: 21 QKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q LN+T L + + + + + +E+I + G L+ E+ V R L + +
Sbjct: 44 QSWLNETQDGLKVQRLRGGIPIPKLENIQPHMKRIEIGADLNGIELAQVGRVLSTTSELT 103
Query: 80 KKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ E +E +D + L + LE+L EL ++ ID + D AS L+
Sbjct: 104 RFFDELSENEVDFERLYMWREQLEVL------PELNRQLKQAIDDDGYVT-DEASPALKA 156
Query: 138 IRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR +R+ E LDS+++ A+ + L+T R R + +K +K + G
Sbjct: 157 IRQNIRRSEQTIREELDSIIRGKNARY-----LSDALVTMRNERYVIPVKQEYKNIF-GG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTAEIAKSEREIKY 250
+ + S+SG T F+EPK +E NN RL +IAE T IL+ L+AE+ REI +
Sbjct: 211 VVHDQSASGQTLFIEPKQILEMNN---RLRQQQIAERNEITRILAELSAELVPYRREITH 267
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ ++D A+A + + V P +S +HV F + +HPLL
Sbjct: 268 NAYVIGKLDFINAKARLGKELKAVVPEISQANHVVFKQA------RHPLL---------- 311
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P K+ V DI + E + +VITGPNTGGKT ++KT
Sbjct: 312 -----DPEKA--------------------VANDIVIGEEYQAIVITGPNTGGKTITLKT 346
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL LM +AGL +P + ++ F + ADIGD QS+EQ+LSTFS H++ IV +L+ V
Sbjct: 347 LGLLQLMGQAGLPIPVEEESKMGIFTEVFADIGDEQSIEQSLSTFSSHMTNIVSVLKKVD 406
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
+SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L NA+
Sbjct: 407 HQSLVLFDELGAGTDPQEGAALAIAILDSLGAKGAYVMATTHYPELKVYGYNRAGTINAS 466
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++TL PTYR+L G G SNA I+K +G D II+ A++++ + + +E+
Sbjct: 467 MEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLDNSIIEAAKQIM-----DGESQDLNEM 521
Query: 551 YQSLMEERRKLES----QAR----TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ L E RRK+ +AR +A+LH E+ + Y+ +E + KE Q
Sbjct: 522 IEDL-ENRRKMAETEYLEARHYVDESAALHKELKEAYQVFFEE-----------REKELQ 569
Query: 603 QVQQELNF----AKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAIAAIVEAHRPD 655
+ ++E N A+ +T++ D QL +KE + A + + H +
Sbjct: 570 KARKEANKIIAEAEENAETIISDIRKMQLESGQ----QGGVKEHQLIDAKTQLSQLHHEE 625
Query: 656 DDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ V + + G++V V + G + T+++ G VQ G +++ V +
Sbjct: 626 TKLAKNKVLKKAKEQKKLKAGDEVIVNTYGQR-GTLLKDNGKGQW-QVQLGILKMNVSEE 683
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ P+ K PR+ + SA SS+ LDLRG R E
Sbjct: 684 DMTPVAPQKEAK-----PRVTTVR------SAESSH-----------VSTQLDLRGKRYE 721
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA ++D I A + ++HG GTG ++ + E L++H V YE +P N G
Sbjct: 722 EALAEVDQYIDAAILAGYPQVTIVHGKGTGALRTGITEFLKHHRSVKSYEF-APQNQGGN 780
Query: 831 VAYI 834
A +
Sbjct: 781 GATV 784
>gi|212638407|ref|YP_002314927.1| recombination and DNA strand exchange inhibitor protein
[Anoxybacillus flavithermus WK1]
gi|212559887|gb|ACJ32942.1| DNA mismatch repair protein, MutSB [Anoxybacillus flavithermus WK1]
Length = 836
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 242/810 (29%), Positives = 390/810 (48%), Gaps = 108/810 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I D+ A G LSP E+ + T+RA + KK EA E D + Y+
Sbjct: 120 LGGIFDVRMQTKRASIGGTLSPHELLDIASTMRAARQL-KKFLEATEADLPHMIAYAA-- 176
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
L ELE++I CID + +LD AS+ L +R + + R + L+S+++
Sbjct: 177 ----QIVPLPELEQRIYHCID-ESGDVLDGASDRLRSLRHQLRTIEGRVRDKLESIIRSS 231
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+AQ + +IT R R + +K +++ GI + SSSGAT F+EP+ VE N
Sbjct: 232 SAQ----KTLSDAIITIRNDRYVIPVKQEYRHTY-GGIVHDQSSSGATLFIEPQSVVELN 286
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N +L E E ILS L+A + + I ++ + ++D FA+A +A+ + P
Sbjct: 287 NELQQLRVKEKQEIERILSELSASVGEQATTIIENVELLAQLDFLFAKAKYAKAIKATKP 346
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++ + ++ + +HPL+ P
Sbjct: 347 AINERGYIRLIQA------RHPLI----------------P------------------- 365
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
SD VP DI++ +VITGPNTGGKT ++KT+GL ++M++AGL +PA + +L F
Sbjct: 366 SDEVVPNDIELGSNYTTMVITGPNTGGKTVTLKTIGLFTVMAQAGLQVPALDGSQLAVFR 425
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ ADIGD QS+EQ+LSTFS H+ IVDIL+ V SLVL DE+G+GTDP EG ALA +I
Sbjct: 426 AVYADIGDEQSIEQSLSTFSSHMVNIVDILKQVDEHSLVLFDELGAGTDPQEGAALAIAI 485
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + +R V TTHY +L NA+ EF +ETL PTY++L G G SNAL+
Sbjct: 486 LDEVHNRGARVVATTHYPELKAYGYNRQGVMNASVEFDIETLSPTYKLLIGIPGRSNALD 545
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I++ +G D II RA+ + + + + SL + +++ E + A L E
Sbjct: 546 ISRRLGLDEHIIARARTYI-----SAESNEVENMIASLEQSKKRAEEEWEQAEKLRQEAE 600
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEIN 635
L E+E + + + + L + ++ + + A + ++Q+ E Q + A + +
Sbjct: 601 QLRNELEKQWTEFNEQQDRLLERAKEEAEFIVKKAMKTAEEIIQNLREMQKKQVIAMKEH 660
Query: 636 SLI---KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVP 692
LI K+ E AI I D + + + G++V V L K + +V
Sbjct: 661 ELIDARKKLEEAIPQI-------DTKKKKQAQKAKQSLHPGDEVKVIHLNQKGQLIEKV- 712
Query: 693 GDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEAS 752
D LVQ G ++++V + N++ + ++PAP + A+
Sbjct: 713 -SDKEWLVQIGILKMKVDEENLQYV--------SSPAPI--------------ETKPIAT 749
Query: 753 YGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVL 807
R LDLRG R E+A ++ D LA + S +IHG GTG +++ V
Sbjct: 750 VKGRDYHVPLELDLRGERYEDALLRVEKYIDDAVLAGYPRVS---IIHGKGTGALRKGVQ 806
Query: 808 EILRNHPRVA--KYEQESPMNYGCTVAYIK 835
+ L+NH V ++ + + G T+ ++
Sbjct: 807 QYLQNHRSVKSIRFGEATEGGTGVTIVELQ 836
>gi|28211873|ref|NP_782817.1| recombination and DNA strand exchange inhibitor protein
[Clostridium tetani E88]
gi|38604782|sp|Q891U1.1|MUTS2_CLOTE RecName: Full=MutS2 protein
gi|28204315|gb|AAO36754.1| DNA mismatch repair protein mutS [Clostridium tetani E88]
Length = 786
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 248/817 (30%), Positives = 386/817 (47%), Gaps = 100/817 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+L E + L +T AL ++Q++ P + + DI IL +L P ++ V L
Sbjct: 39 NLYEVEMHLEETMEALDLLQTKGEPPFE--GVYDIRDILIRVEKAMVLLPGQLLKVASIL 96
Query: 73 ----RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
R + V +K E +++ +ELLK LEE I F I I
Sbjct: 97 KSSRRFKDYVGRKHEETPH---KNIEDICEGIELLKG------LEESI-FNIVISDDEIA 146
Query: 129 DRASEDLELIRAE-RKRN---MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
DRAS L IR R +N + ++SL++K + + ++ + T R R + ++A
Sbjct: 147 DRASLKLYGIRRSLRDKNDSLRDRVNSLVRKYSPYLQES------IYTIRGDRYVLPVRA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
HK +P G+ + SSSGAT F+EP V NN L E E IL L+ ++ +
Sbjct: 201 EHKGSVP-GLVHDQSSSGATLFIEPMSLVNLNNEIKELLLKEREEIERILEELSLKVYNN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ + E+D FA+A FA + P +S V IEG KHPL+
Sbjct: 260 LDVVNVNAKVIWELDFIFAKAKFASHNNCTLPKVSEDGIVDI-----IEG-KHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
D E VP DI + + ++ITGPNTGGK
Sbjct: 310 ----------------DTEKV---------------VPTDIYLGKDFTSLIITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KTLGL +M +GL +PAK + + +F+ I ADIGD QS+EQ+LSTFS H+ IVD
Sbjct: 339 TVTLKTLGLIHIMGLSGLLIPAKENSTIAFFEEIFADIGDEQSIEQSLSTFSSHMVNIVD 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I+ +SLVL DE+G+GTDP+EG ALA SIL+ LR R V TTHY++L K
Sbjct: 399 IISKADHKSLVLFDELGAGTDPTEGAALAISILENLRRRKCKIVATTHYSELKGYALKTE 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II+ A+ + E
Sbjct: 459 DVENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLGEDIIEEAKNNI-----ESDS 513
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
+ L + L + K AR A E L + ED+ K ++ L ++
Sbjct: 514 LKFEALIEKLQSKSIKASDDARRAEMYKLEADRLKDKYEDKLKIVEETREKLLKGAQEEA 573
Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
++ + AK + D ++++ + + ++E + + + ++ E
Sbjct: 574 KKLIKEAKEEADEILKNIRELEKMGYSSTARQKLEEERKKLNSKIHKLEEKEENLNKEKG 633
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
GE+V++ L D+ ++ P + V VQ G M++ VK +++R + K +N
Sbjct: 634 KKIKEINLGEEVYLPKL-DQKVIILSKPDNRGEVQVQAGIMKINVKLDDLRLVDKPKEEN 692
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
K+ R++ R++T ++ +DLRGM EA + D L
Sbjct: 693 ---------KKGRKREAKL------------RMRTVESEIDLRGMDSMEAVYNTDKYLDE 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + VIHG GTG++++ + ++L+ HP+V Y
Sbjct: 732 AYVAGLKEVTVIHGKGTGILRKSINDMLKRHPQVKNY 768
>gi|296331594|ref|ZP_06874063.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305675447|ref|YP_003867119.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296151189|gb|EFG92069.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. spizizenii ATCC 6633]
gi|305413691|gb|ADM38810.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. spizizenii str. W23]
Length = 785
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 250/837 (29%), Positives = 410/837 (48%), Gaps = 107/837 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
S++E +K L++ A A+++ + + DI G L A G +LSPSE + L A
Sbjct: 39 SIDEIKKQLDEVDEASAIIRLRGQAPFGGLTDIRGALRRAEIGSVLSPSEFTEISGLLYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V + +++ AE DG + PL+ + + L++LE I CID + LD ASE
Sbjct: 99 VKQMKHFISQMAE-DGVDI----PLIHQHAEQLITLSDLERDINSCIDDHGEV-LDHASE 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 153 TLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSGAT F+EP+ V+ NN + E E IL +LT + A+ E+
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEQTAEHTEEL- 266
Query: 250 YLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+L RVL+ +D FA+A +A+ + PI++ V + +HPLL
Sbjct: 267 FLDLRVLQTLDFIFAKARYAKAVKATKPIMNDNGFVRLKKA------RHPLL-------- 312
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
P V N DI++ + +VITGPNTGGKT ++
Sbjct: 313 --------PPDQVVAN-------------------DIELGGDFSTIVITGPNTGGKTVTL 345
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL +LM+++GL++PA F+ + ADIGD QS+EQ+LSTFS H+ IV ILE
Sbjct: 346 KTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILEQ 405
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V+ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L N
Sbjct: 406 VNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYNREGVMN 465
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETL PTY++L G G SNA I+K +G II +A+ + + +
Sbjct: 466 ASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPNHIIGQAKSEM-----TAEHNEVD 520
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
+ SL + +++ E + S+ E L++E++ + +L+ + + + QQ +++
Sbjct: 521 TMIASLEQSKKRAEEELSETESIRKEAEKLHKELQQQIIELNSKKDKMLEEAEQQAAEKV 580
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETNT 665
A + + ++ + + + + + + LI K E A+ ++ +P+ ++T
Sbjct: 581 KAAMKEAEDIIHELRSIKEEHKSFKDHELINAKKRLEGAVPTFEKSKKPEK----TKTQK 636
Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
F P G++V V + G K T++E G ++ VQ G ++++VK+ ++ I ++
Sbjct: 637 RDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQIGILKMKVKEKDLEFIKSA----- 687
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DI 780
P P+ K A G S LDLRG R E A ++ D
Sbjct: 688 --PEPKKEKII-------------TAVKGKDYHVSLE-LDLRGERYENALSRVEKYLDDA 731
Query: 781 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L+NH V +++ + G TV +K
Sbjct: 732 VLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTVVELK 785
>gi|423719024|ref|ZP_17693206.1| DNA mismatch repair ATPase, mutS family [Geobacillus
thermoglucosidans TNO-09.020]
gi|383367927|gb|EID45202.1| DNA mismatch repair ATPase, mutS family [Geobacillus
thermoglucosidans TNO-09.020]
Length = 784
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 240/810 (29%), Positives = 380/810 (46%), Gaps = 101/810 (12%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ +AAL + PL I DI L A G LSP E+ + T+ A +
Sbjct: 47 QEETDEAAAALRLRGHVPL--GGIVDIRASLKRAKIGGTLSPHELLDIASTISAS----R 100
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+L + E + + + L + L E+++ I CID + LD ASE L IR
Sbjct: 101 QLKQFIESLHEEKEEFPHLAGYAEKLVALPEVQQAIERCIDDHGEV-LDHASERLRSIRQ 159
Query: 141 ERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ + R E L+S+++ +AQ + I IT R R + +K ++ GI
Sbjct: 160 QLRTTEARVREKLESIIRSPSAQKMLSDAI----ITIRNDRYVIPVKQEYRGAY-GGIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP+ VE NN E E IL+ LT +A + + +
Sbjct: 215 DQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTGIVAGHAEALLENVGILA 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++D FA+A +A + P L+ + ++ + +HPL+ ++
Sbjct: 275 QLDFIFAKAKYANKLKATKPALNDRGYIRLLQA------RHPLIDQEAV----------- 317
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP DI++ + +VITGPNTGGKT ++KT+GL +L
Sbjct: 318 ------------------------VPNDIELGKDYTTIVITGPNTGGKTVTLKTIGLLTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA + L F I ADIGD QS+EQ+LSTFS H+ IV+IL V ESLVL
Sbjct: 354 MAQAGLFIPALDGSELAVFRSIYADIGDEQSIEQSLSTFSSHMVNIVEILRDVDHESLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA +IL + R V TTHY +L NA+ EF E
Sbjct: 414 FDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTY++L G G SNA I+K +G D +II+RA +L + + + SL +
Sbjct: 474 TLRPTYKLLIGIPGRSNAFEISKRLGLDERIIERA-----KLHISAESNNVENMIASLEQ 528
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
+++ E + + A E L R+ E + ++L + + + ++ + ++ + +
Sbjct: 529 SKKRAEEELKRAEEARMEAEQLRRDWEQKWEELHEKREEIIEEAKRKAADIVRSSQQKAE 588
Query: 617 TVVQDFENQLRDASADEINSLIKESE--SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
++ + ++ A+ IKE E A + EA + + + Q G+
Sbjct: 589 RIIHELRRMQQEKQAE-----IKEHELIEAKKRLQEAMPTLEKKKKERKKQAIHSFQPGD 643
Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 734
+V V SL K V +V DD VQ G +++++ + ++ I S K P ++
Sbjct: 644 EVKVISLNQKGYLVEKV--SDDEWQVQLGILKMKINERDLEYI-GSAPKTETKPLATVKG 700
Query: 735 QQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRS 789
+ D G LDLRG R E+A +L D LA + S
Sbjct: 701 K--DYHVGL-------------------ELDLRGERYEDALARLEKYIDDALLAGYPRVS 739
Query: 790 VLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ IHG GTG +++ V E L+ H V +
Sbjct: 740 I---IHGKGTGALRKGVQEFLKTHRAVKSF 766
>gi|336431523|ref|ZP_08611372.1| hypothetical protein HMPREF0991_00491 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336013825|gb|EGN43697.1| hypothetical protein HMPREF0991_00491 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 791
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 209/660 (31%), Positives = 323/660 (48%), Gaps = 81/660 (12%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R CV +KA ++ + +G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCVPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ E A+ EI+ + ++D FAR A M+ PIL++ D
Sbjct: 245 EIQVILARLSEETAQYIEEIRTDYRILTDLDFIFARGALALSMNASRPILNT------DG 298
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I+I +HPLL +P K VPI + +
Sbjct: 299 RIHIREGRHPLL---------------DPKKV--------------------VPITVSLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ +++ITGPNTGGKT S+KT+GL +LM ++GL++PA++ L F + ADIGD QS+
Sbjct: 324 DDFSLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPARDRSELAVFKQVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L V SLVL DE+G+GTDP+EG ALA +IL YL R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLHDVDENSLVLFDELGAGTDPTEGAALAIAILSYLHGRGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF +E+LRPTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPDYII 503
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
+ A + R Q +L L +R +E + A+ EI L + + + +
Sbjct: 504 EDA-----KTRLSEQDVSFEDLISDLETSKRTIEKEQEEIAAYKKEIEALKSQAQQKQER 558
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD-ASADEINS-----LIKESE 642
++ + + A+ ++ L AK D +++F ++ SA E+ K E
Sbjct: 559 IEEQRERILAEAREKANTILRDAKDVADETIKNFRKFGKENISAAEMEKERERLRKKMKE 618
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
+ ++ ++ +P ++ ++ + GE V V S+ + T+ +P V VQ
Sbjct: 619 NTASSSLKVQKPKKEYKPTDF-------KLGESVKVLSM-NLTGTISSLPDSRGNVTVQM 670
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANP-APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G +R +V +++ I ANP AP+ K R S ++ S P +
Sbjct: 671 GILRSQVHISDLEII------EEANPYAPKSFK----RTSKGKLKMSKSLSVSPEI---- 716
Query: 762 NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+L G V+EA +LD L A S + V+HG GTG +++ + E LR V Y
Sbjct: 717 ---NLLGKTVDEAVSELDKYLDDALLSHLSTVRVVHGKGTGALRKGIHEFLRRQKHVKSY 773
>gi|336428866|ref|ZP_08608841.1| MutS2 protein [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336004409|gb|EGN34474.1| MutS2 protein [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 792
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 209/657 (31%), Positives = 322/657 (49%), Gaps = 81/657 (12%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
LIT R R C+ +KA ++ +P G+ + SS+G+T F+EP V NN L E E
Sbjct: 187 LITSRNGRYCIPVKAEYRSQVP-GMIHDQSSTGSTLFVEPAAVVNLNNQMRELEIKEQEE 245
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
+L+ L+A++A+ +I + +D FA+A A + PI + + H+
Sbjct: 246 IEKVLASLSAQVAEHTEDIAENQRILTLLDFIFAKASLALEQNATEPIFN-EDHI----- 299
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
+NI G +HPLL D + + VPIDI++
Sbjct: 300 LNIRGARHPLL--------------------DKKKT---------------VPIDIRLGR 324
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ +++ITGPNTGGKT S+KT GL LM +AGL++PA + L F + ADIGD QS+E
Sbjct: 325 DYDLLIITGPNTGGKTVSLKTTGLFCLMGQAGLHIPALDRSELSIFREVYADIGDEQSIE 384
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ IV IL+ +SL L DE+G+GTDP+EG ALA +IL +L DR +
Sbjct: 385 QSLSTFSSHMTSIVSILKNADADSLCLFDELGAGTDPTEGAALAIAILNFLHDRGIRTMA 444
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY++L + ENA EF +E+LRPTYR+L G G SNA I+ +G II
Sbjct: 445 TTHYSELKVYALSTSFVENACCEFDVESLRPTYRLLIGIPGKSNAFAISSRLGLSDDIIN 504
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
A R + + +L L + R +E + AS E+ L +++E + + +
Sbjct: 505 SA-----RTQISAEAKSFEDLLTDLEQSRVTIEKEQLEIASYKREVEALKKQLEAKQEKI 559
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI-----NSLIKESESA 644
D+ + + +Q ++ L AK D ++ F+ AS ++ N K S+
Sbjct: 560 DQAKERILREANEQAREILQDAKNTADETIRAFQKAGPGASMKDLEKARENLRGKISDKN 619
Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
V+ +P +++ + GE V + S+G K TV +P + + VQ G
Sbjct: 620 EKLAVKNQQP------AQSGVKPSQLKLGESVRIVSMGLK-GTVSTMPDNKGNLFVQCGI 672
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
+R + NIR + + K+A+ A ++G GS S + + N
Sbjct: 673 IRT---QTNIRDLVLIQEKDASATA----------KAGRTGSGKIRMSKSLSISSEIN-- 717
Query: 765 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
L G V+EA LD L A S + ++HG GTG ++ V +NH R KY
Sbjct: 718 -LLGKTVDEAMSVLDKYLDDAYLAHLSTVRIVHGKGTGALRNAV----QNHLRKVKY 769
>gi|366088425|ref|ZP_09454910.1| mutS family ATPase [Lactobacillus zeae KCTC 3804]
Length = 786
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 241/828 (29%), Positives = 399/828 (48%), Gaps = 103/828 (12%)
Query: 21 QKLLNQTS-AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
Q+ L++T+ A A+ + + +E+I L G +L+ E+ ++ R L+ V+ +
Sbjct: 44 QRALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLNGQELASISRVLQTVSAID 103
Query: 80 KKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
K LT+ ++D + L L + L +L ++ +D + D AS +L I
Sbjct: 104 KFLTDLQDQID------FRQLYTLQEELTALPQLSRRLKTAVDPDGTLT-DEASPELHGI 156
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R + KR ++ + + + + Q+ + P++T R R + +KA+++ G+ +
Sbjct: 157 REQIKRIESDIRNKMSEYT-RGAQSKYLSDPIVTIRDDRYVIPVKAAYRSKF-GGVVHDQ 214
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S++G T F+EP+ V NN +E AE +L+ L+ E+A +IK +
Sbjct: 215 SATGQTLFVEPQAIVALNNRLREAQMAETAEVNRVLAELSNELAPYTGQIKANAAVLGHF 274
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D A+A A+ P++SS D+ + + +HPL+
Sbjct: 275 DFINAKAKLAKNQKATEPLVSS------DNDVLLRQARHPLI------------------ 310
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
+ VG+ DI + + + +VITGPNTGGKT ++KTLGL LM
Sbjct: 311 -----DPHQVVGN------------DIPLGADYQAMVITGPNTGGKTITLKTLGLLQLMG 353
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
++GL++PA + R+ FD + ADIGD QS+EQNLSTFS H+ IV IL+ +SR SLVL D
Sbjct: 354 QSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLSTFSAHMDNIVHILKQLSRNSLVLFD 413
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDP EG ALA +IL + + V TTHY +L + NA+ EF +TL
Sbjct: 414 ELGAGTDPQEGAALAIAILDAVGEIGAYVVATTHYPELKLYGYNTPKTINASMEFDSKTL 473
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
+PTYR+L G G SNA +I+ +G + I+ RA+ ++ H + + L +R
Sbjct: 474 QPTYRLLVGVPGRSNAFDISMRLGLPQPIVDRAKSMI-----SSDSHELNNMISDLERQR 528
Query: 559 RKLESQART-------AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
+ E+ A +LH E+ D Y+ E R A +AKE + ++ A
Sbjct: 529 KAAENARAAAQRQLADAQALHDELADAYKTFTTE-----RDAQLQQAKE--KANAMVDKA 581
Query: 612 KVQIDTVVQDF-ENQLRDASADEINSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSF 668
+V+ D +++ + QL + + + N LI +A A+ H+ P V
Sbjct: 582 QVKADKIIKQLRQMQLTNPGSVKENQLI----AAKTALKRLHQDEPLQKNRVLRREREKQ 637
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
G++V V S D+ T++E D D VQ G ++++V + + + +K+ +A P
Sbjct: 638 ALHVGDEVKVASY-DQTGTLLE-QFDKDHWQVQMGILKMKVPTSELEKVKPTKQASAQRP 695
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWE 786
++ SG S GP +LDLRG R E+A LD I A
Sbjct: 696 VVKV--------SGGGMS-------GP-----STTLDLRGERYEQAMADLDQYIDAALLA 735
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
+ +IHG+GTG ++ V + L+ H +V + +P N G + A I
Sbjct: 736 GYPSVTIIHGLGTGAIRNGVTQYLKRHRQVKSFG-FAPQNAGGSGATI 782
>gi|381211900|ref|ZP_09918971.1| DNA mismatch repair protein [Lentibacillus sp. Grbi]
Length = 780
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 245/804 (30%), Positives = 383/804 (47%), Gaps = 116/804 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKLTEAAELDGDSLQRYS 97
L + DI + +V G +L+ E V TL R N K+ E
Sbjct: 65 LGGVADIRAAVKRSVIGGVLTAGECLDVASTLYGGRQAKNFLGKMEEDL----------- 113
Query: 98 PLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSL 152
P+L+ L + L +LE I CID + ++D AS L IR+ R + LDS
Sbjct: 114 PILKGLAEKIISLRKLETDINSCIDDRG-NVMDSASVKLRSIRSSIRTYESRVRDKLDSY 172
Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
K Q+ + +IT R R + +K ++ + GI + S+SGAT FMEPK
Sbjct: 173 TKS------QSKMLSDAIITIRNDRYVLPVKQEYRGAI-GGIVHDQSASGATLFMEPKAV 225
Query: 213 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
V+ NN +E E IL L+ +IA E + + + +ID ARA + M
Sbjct: 226 VDLNNQLQEAKVNEKKEIERILRELSGKIADDEAILTENVTVLAKIDFITARAKLGRGMK 285
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
P ++ + IN++ +HPL+ P
Sbjct: 286 AAMPAIND------NGIINVKQARHPLI----------------P--------------- 308
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
D V D+ + + +VITGPNTGGKT ++K +GL +LM+++GL +PA + +
Sbjct: 309 ----DDEVVSNDVVLGKDYTSIVITGPNTGGKTVTLKMIGLFTLMAQSGLQIPAADGCEM 364
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
FD + ADIGD QS+EQNLSTFS H+ IV IL + +SLVL DE+G+GTDP EG AL
Sbjct: 365 AVFDDVFADIGDEQSIEQNLSTFSSHMINIVSILSGIDDKSLVLFDELGAGTDPQEGAAL 424
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A SIL + R V TTHY +L NA+ EF +ETL+PTYR+L G G S
Sbjct: 425 AMSILDDVVSRGARVVATTHYPELKAYGFNRDNVINASVEFDVETLQPTYRLLIGVPGRS 484
Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 572
NA IA +G + II RA+ V + E ++ + L QS RR+ E+ A +
Sbjct: 485 NAFEIAGRLGLAQSIIDRAKNQV-GVNSESVENMIASLEQS----RRQAEADYEEAHEIL 539
Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-----QLR 627
E +L ++ + + + L K ++ + L A+ + +T+V + + QL+
Sbjct: 540 QESEELRNDLIKAWQQYENKREDLYKKAEEKADKALQKARDEAETIVDEIRHMKTDAQLK 599
Query: 628 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS-FTPQFGEQVHVKSLGDKLA 686
+ E +++E++ +++ +A++P + NT+ F P G+++ + S ++
Sbjct: 600 EHEWIEARKMLEEAQPKLSS-KKANKPK-----QQPNTAKEFKP--GDEIKLLS-ANQQG 650
Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 746
T++E +++ L+Q G M+V+VK++ I+ I K K++ P + GS
Sbjct: 651 TILEKLNENE-YLIQVGIMKVQVKRSEIQLI---KHKSSVTEKPL---------ATVKGS 697
Query: 747 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKE 804
S K LDLRG R E+A L+ I A +F+IHG GTG +++
Sbjct: 698 SFH----------VKTELDLRGERFEDAMGDLEKYIDDALLAGYPKVFIIHGKGTGALRK 747
Query: 805 RVLEILRNHPRVAKYEQESPMNYG 828
V E + H R+A E P + G
Sbjct: 748 GVKEFAKKHTRIA---SERPGSTG 768
>gi|154503470|ref|ZP_02040530.1| hypothetical protein RUMGNA_01294 [Ruminococcus gnavus ATCC 29149]
gi|153795570|gb|EDN77990.1| MutS2 family protein [Ruminococcus gnavus ATCC 29149]
Length = 791
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 208/660 (31%), Positives = 323/660 (48%), Gaps = 81/660 (12%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R CV +KA ++ + +G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCVPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ E A+ EI+ + ++D FAR A M+ P+L++ D
Sbjct: 245 EIQVILARLSEETAQYIEEIRTDYHILTDLDFIFARGALAFSMNASRPLLNT------DG 298
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I+I +HPLL +P K VPI + +
Sbjct: 299 RIHIREGRHPLL---------------DPKKV--------------------VPITVSLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ +++ITGPNTGGKT S+KT+GL +LM ++GL++PA++ L F + ADIGD QS+
Sbjct: 324 DDFSLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPARDRSELAVFKQVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L V SLVL DE+G+GTDP+EG ALA +IL YL R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLHDVDENSLVLFDELGAGTDPTEGAALAIAILSYLHGRGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF +E+LRPTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPDYII 503
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
+ A + R Q +L L +R +E + A+ EI L + + + +
Sbjct: 504 EDA-----KTRLSEQDVSFEDLISDLETSKRTIEKEQEEIAAYKKEIEALKSQAQQKQER 558
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD-ASADEINS-----LIKESE 642
++ + + A+ ++ L AK D +++F ++ SA E+ K E
Sbjct: 559 IEEQRERILAEAREKANTILRDAKDVADETIKNFRKFGKENISAAEMEKERERLRKKMKE 618
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
+ ++ ++ +P ++ ++ + GE V V S+ + T+ +P V VQ
Sbjct: 619 NTASSSLKVQKPKKEYKPTDF-------KLGESVKVLSM-NLTGTISSLPDSRGNVTVQM 670
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANP-APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G +R +V +++ I ANP AP+ K R S ++ S P +
Sbjct: 671 GILRSQVHISDLEII------EEANPYAPKSFK----RTSKGKLKMSKSLSVSPEI---- 716
Query: 762 NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+L G V+EA +LD L A S + V+HG GTG +++ + E LR V Y
Sbjct: 717 ---NLLGKTVDEAVSELDKYLDDALLSHLSTVRVVHGKGTGALRKGIHEFLRRQKHVKSY 773
>gi|342732204|ref|YP_004771043.1| recombination and DNA strand exchange inhibitor protein [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|384455611|ref|YP_005668206.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|417960547|ref|ZP_12603130.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-1]
gi|417964504|ref|ZP_12606221.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-4]
gi|417968357|ref|ZP_12609386.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-co]
gi|418372458|ref|ZP_12964550.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
gi|342329659|dbj|BAK56301.1| recombination and DNA strand exchange inhibitor protein [Candidatus
Arthromitus sp. SFB-mouse-Japan]
gi|346983954|dbj|BAK79630.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|380330812|gb|EIA21980.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-1]
gi|380339872|gb|EIA28540.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-co]
gi|380341143|gb|EIA29642.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-4]
gi|380342127|gb|EIA30572.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-mouse-SU]
Length = 783
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 255/857 (29%), Positives = 402/857 (46%), Gaps = 142/857 (16%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
PF +++E + LN+TS A+ ++ S P D ++D+ L G +S EI +
Sbjct: 36 PFS-TIDEVIQNLNETSEAIEFIKEFSSP-DFVGLDDVYIYLEKIDKGGSVSIKEIYKIG 93
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI-DCKLLIIL 128
TL+ + V L++ + + L Y N + LE+ I I D + I
Sbjct: 94 TTLKCIREVKDYLSKRSL---NYLNYY------YDNISTFKYLEDDIFKAIKDGEE--IS 142
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS++L IR E K ++ L ++ + + + + T R R C+ +K+ +K
Sbjct: 143 DFASDNLFKIRKELKSKTASIKRKLSEILKT--YSKYLQENVFTVRGDRYCIPVKSEYKS 200
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ GI N SSSG+TYF+EP V NN L +E E IL L+ +I S I
Sbjct: 201 QIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSIDNI 259
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ + ++ F + ++ +DG+ P ++ + S+ +HPL+
Sbjct: 260 YLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN------- 306
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ DV VP+++ + + ++ITGPNTGGKT ++
Sbjct: 307 ----------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTVTL 338
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL LM+ +GL++PA R+ + + I ADIGD QSLEQNLSTFS HI I+ + +
Sbjct: 339 KTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMTDN 398
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
+ ++LVL+DE+GSGTDP EG ALA SI+++ + + TTHY+ L EN
Sbjct: 399 IKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNVEN 458
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF ++TLRPTYR+ G G SNA IA S+G ++ II+ AQK
Sbjct: 459 ASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKY-------------- 504
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDL-DRRAAHLKAKETQQV 604
L E+ K ES +T E + REIE +E K L D+ L+ E +++
Sbjct: 505 -----LSEDIIKFESIIKTLEEKTTEAIKNNREIEILREENKILNDKLKKRLENIEKEKL 559
Query: 605 Q----------QELNFAKVQIDTVVQDFENQLRDASADEINSL----IKESESAIAAIVE 650
+ Q ++ AK +ID V L+ +A E+N + +K+ ESA I
Sbjct: 560 RIIESAKDEGYQIISNAKGEIDKV-------LKIINALEMNGIDLSSVKDLESARREI-- 610
Query: 651 AHRPDDDFSVSE----TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
+ D ++E N+S F +F G +K +G + ++E P VLVQ G
Sbjct: 611 KKKIDKQNKMNEEKSFKNSSKFNIEFKSGMTAFLKRIGQNV-IILENPDSKGNVLVQAGV 669
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
+++ V NI + + + + ++ K + D + R T SL
Sbjct: 670 LKLTV---NIAELESPIK----DKFSKVIKSKRDLK--------------LRTNTISTSL 708
Query: 765 DLRGMR----VEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
DLRGM + E LD A + + +IHG GTGV+K + +LRNH V +
Sbjct: 709 DLRGMDELNAISEVEKYLDDAFVSGLNE--VCIIHGKGTGVLKNSINNLLRNHIHVKAHR 766
Query: 821 --QESPMNYGCTVAYIK 835
+ G T+ Y+K
Sbjct: 767 LGEYGEGGNGVTIVYLK 783
>gi|345023410|ref|ZP_08787023.1| DNA mismatch repair protein [Ornithinibacillus scapharcae TW25]
Length = 779
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 250/837 (29%), Positives = 406/837 (48%), Gaps = 115/837 (13%)
Query: 16 SLEESQKLLNQTS-AALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+LEE +L +T AAL + + P+ L I DI L AV G +LS SE + T+
Sbjct: 39 NLEEVNQLQEETDEAALVIRLNVPVPLGGIFDIRESLKRAVIGGVLSTSECLDIANTIYG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V K E L P+L+ L+++ L +LE +I CID + +D A+E
Sbjct: 99 GRQV-KDFVEG-------LDEELPILKGLVESITPLRDLELEIKSCIDDHGHV-MDSATE 149
Query: 134 DLELIRA----ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR+ R E L+S + + + A +IT R R + +K ++
Sbjct: 150 KLRGIRSSIRTHESRVREKLESYTRTKSNMLSDA------IITIRNDRYVIPVKHEYRGA 203
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
+ GI + S+SG T FMEPK V+ NN L E E IL L+ IA+ E +
Sbjct: 204 I-GGIVHDQSASGQTLFMEPKAVVDLNNQLQELYAREKQEIERILRELSHRIAEDEGFLS 262
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + ID FARA + M P ++ Q I ++ +HPL+
Sbjct: 263 ENIRILASIDFIFARANLGRAMKAARPAMNDQG------IIKMQQARHPLI--------- 307
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
N E V + DI++ + +VITGPNTGGKT ++K
Sbjct: 308 --------------NIEDVVAN------------DIEIGRDYTTIVITGPNTGGKTVTLK 341
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
+GL +LM+++GL +PA + + F+ + ADIGD QS+EQNLSTFS H++ IVDIL+ V
Sbjct: 342 MVGLCTLMAQSGLQVPALDGCEMAVFEHVFADIGDEQSIEQNLSTFSSHMTNIVDILKHV 401
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+LVL DE+G+GTDP EG ALA +IL + R + TTHY +L NA
Sbjct: 402 DDRTLVLFDELGAGTDPQEGAALAMAILDEVVSRRARVIATTHYPELKAYGYNREDVINA 461
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF ++TL+PTYR+L G G SNA +I+K +G D II RA+ V + + ++ +
Sbjct: 462 SMEFDVQTLQPTYRLLIGVPGRSNAFDISKRLGLDEFIIDRAKSHV-GIDSKNVENMIAA 520
Query: 550 LYQSLMEERRKLESQART---AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
L +S ++ ++ E + + L E+ + ++ ED+ + L ++A K + ++
Sbjct: 521 LEKSKVQAEKEYEEAHKILLESEELRKEMEEEWQRFEDKREALYKKAEEKAEKAISKARE 580
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
E +I + D ++++ E L +++ +++ +P + S+ NT+
Sbjct: 581 EAEIIVSEIRKMKTD--AKMKEHEWIEAKKLFDDAQPNLSS-----KPKE----SKRNTT 629
Query: 667 S---FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
S +P G+++ + ++ ++ TV+E + + LVQ G M+V+VK+N+++ I
Sbjct: 630 SKEELSP--GDEIKLLTV-NQNGTVIEKVNEKE-YLVQVGIMKVKVKRNDLQLI------ 679
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL----- 778
P KQ + + SN LDLRG R E+A +L
Sbjct: 680 --GKP-----KQTFQKPLATVKGSNYHVPL---------ELDLRGERFEDALLKLEKYVD 723
Query: 779 DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
D LA + +F+IHG GTG +++ V + ++ HP +A Q + G V ++
Sbjct: 724 DAVLAGYPK---VFIIHGKGTGALRKGVQDFVKKHPSIASSRQGAAGEGGSGVTVLE 777
>gi|418016394|ref|ZP_12655959.1| DNA mismatch repair protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|345506729|gb|EGX29023.1| DNA mismatch repair protein [Candidatus Arthromitus sp.
SFB-mouse-NYU]
Length = 801
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 255/857 (29%), Positives = 402/857 (46%), Gaps = 142/857 (16%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
PF +++E + LN+TS A+ ++ S P D ++D+ L G +S EI +
Sbjct: 54 PFS-TIDEVIQNLNETSEAIEFIKEFSSP-DFVGLDDVYIYLEKIDKGGSVSIKEIYKIG 111
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI-DCKLLIIL 128
TL+ + V L++ + + L Y N + LE+ I I D + I
Sbjct: 112 TTLKCIREVKDYLSKRSL---NYLNYYYD------NISTFKYLEDDIFKAIKDGEE--IS 160
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
D AS++L IR E K ++ L ++ + + + + T R R C+ +K+ +K
Sbjct: 161 DFASDNLFKIRKELKSKTASIKRKLSEILKT--YSKYLQENVFTVRGDRYCIPVKSEYKS 218
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ GI N SSSG+TYF+EP V NN L +E E IL L+ +I S I
Sbjct: 219 QIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSIDNI 277
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ + ++ F + ++ +DG+ P ++ + S+ +HPL+
Sbjct: 278 YLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN------- 324
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+ DV VP+++ + + ++ITGPNTGGKT ++
Sbjct: 325 ----------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTVTL 356
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL LM+ +GL++PA R+ + + I ADIGD QSLEQNLSTFS HI I+ + +
Sbjct: 357 KTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMTDN 416
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
+ ++LVL+DE+GSGTDP EG ALA SI+++ + + TTHY+ L EN
Sbjct: 417 IKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNVEN 476
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF ++TLRPTYR+ G G SNA IA S+G ++ II+ AQK
Sbjct: 477 ASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKY-------------- 522
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDL-DRRAAHLKAKETQQV 604
L E+ K ES +T E + REIE +E K L D+ L+ E +++
Sbjct: 523 -----LSEDIIKFESIIKTLEEKTTEAIKNNREIEILREENKILNDKLKKRLENIEKEKL 577
Query: 605 Q----------QELNFAKVQIDTVVQDFENQLRDASADEINSL----IKESESAIAAIVE 650
+ Q ++ AK +ID V L+ +A E+N + +K+ ESA I
Sbjct: 578 RIIESAKDEGYQIISNAKGEIDKV-------LKIINALEMNGIDLSSVKDLESARREI-- 628
Query: 651 AHRPDDDFSVSE----TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
+ D ++E N+S F +F G +K +G + ++E P VLVQ G
Sbjct: 629 KKKIDKQNKMNEEKSFKNSSKFNIEFKSGMTAFLKRIGQNV-IILENPDSKGNVLVQAGV 687
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
+++ V NI + + + + ++ K + D + R T SL
Sbjct: 688 LKLTV---NIAELESPIK----DKFSKVIKSKRDLK--------------LRTNTISTSL 726
Query: 765 DLRGM----RVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
DLRGM + E LD A + + +IHG GTGV+K + +LRNH V +
Sbjct: 727 DLRGMDELNAISEVEKYLDDAFVSGLNE--VCIIHGKGTGVLKNSINNLLRNHIHVKAHR 784
Query: 821 --QESPMNYGCTVAYIK 835
+ G T+ Y+K
Sbjct: 785 LGEYGEGGNGVTIVYLK 801
>gi|408789877|ref|ZP_11201518.1| Recombination inhibitory protein MutS2 [Lactobacillus florum 2F]
gi|408520899|gb|EKK20921.1| Recombination inhibitory protein MutS2 [Lactobacillus florum 2F]
Length = 785
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 231/795 (29%), Positives = 374/795 (47%), Gaps = 108/795 (13%)
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCN-FLTELEEK-----IGFCIDCKLL 125
L AV+ K+L A L+G L ++S +L+ ++ N F TELE + ++ +L+
Sbjct: 68 LVAVDQPLKRLEIGANLNGKELAQFSQILQTVQRINQFFTELESDHVELLTLYSLNEQLV 127
Query: 126 II-----------------LDRASEDLELIRAERKRNMENLDSLLKKVAAQIF--QAGGI 166
+ LD AS+ L+ +R + ++ + + K+ I +A +
Sbjct: 128 ALPELNQRLLQSVDATGWLLDTASQQLQQLRHQIEQTQATIKT---KMNGYIHGKRAKYL 184
Query: 167 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 226
+IT R R + +KA K GI + S+SG T ++EP+ VE NN +
Sbjct: 185 SDTVITIRDDRYVIPVKAEAKQQF-GGIVHDQSASGQTLYVEPQAVVELNNQLRFQQKAA 243
Query: 227 IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
+ EE IL+ L+ E+ + ++ +DL A+A +A+++ P LS ++ V
Sbjct: 244 LQEEKRILAELSDELRPEGAHLAANATQLGHLDLINAKARYARFLHATKPKLSIRNEVHL 303
Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
++ +HPL+ SL NS I++
Sbjct: 304 KTA------RHPLI------SLDRVVGNS---------------------------IELN 324
Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
+C R ++ITGPNTGGKT +MKTLGL LM+++GL++ A ++ FD + ADIGD Q
Sbjct: 325 QDC--RQLIITGPNTGGKTITMKTLGLLQLMAQSGLFIAADEGSQVGVFDEVFADIGDEQ 382
Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
S+EQNLSTFS H+ I+ IL+ + SLVLIDE+G+GTDPSEG ALA +IL +
Sbjct: 383 SIEQNLSTFSSHLDNIIQILQQTTARSLVLIDELGAGTDPSEGAALAMAILDAIERLHST 442
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
+ TTHY +L ENA+ EF ETLRPTYR+L G G SNAL IA+ +G +
Sbjct: 443 VLATTHYPELKAYAYNHVATENASMEFDEETLRPTYRLLMGVPGQSNALQIARRLGLSEQ 502
Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
I+ +A + E Q + + + R E + A L A +L +E++D
Sbjct: 503 IVNQATAYTD----ETDQDLNRMITELTQQTRLAHERSTQLAEKLKA-TTELQQELQDHF 557
Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
+ L + ++ Q + K + V+ D + RD + I + +
Sbjct: 558 GQFQAQREQLVNQAKREANQLVTKTKREAQAVIDDLHQKQRDLQGGVKENEIIADQGKLN 617
Query: 647 AIVE--AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
A+ + A R + V + + + T + G+ V VK+ G + ++ G + VQ G
Sbjct: 618 ALEQQPALRKN---RVLKRSKAKQTLRVGDDVLVKNYGQQ-GVLLRKLGQQNWE-VQLGI 672
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
++++V ++N+ R+ A P +R+ + SA +L
Sbjct: 673 LKMKVAESNLE--KQGTRQQPAKGTPMVRR------TKSAAVP--------------TTL 710
Query: 765 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRG+R ++A H+LD L A + ++HG GTG ++ V +IL H +V K+
Sbjct: 711 DLRGVRYDDAMHRLDQYLDAALLAGYPTVTIVHGKGTGALRTGVTKILSRHRQVQKFSFA 770
Query: 823 SPM--NYGCTVAYIK 835
P G TV K
Sbjct: 771 PPSAGGDGATVVTFK 785
>gi|310640954|ref|YP_003945712.1| muts2 protein [Paenibacillus polymyxa SC2]
gi|309245904|gb|ADO55471.1| MutS2 protein [Paenibacillus polymyxa SC2]
Length = 733
Score = 271 bits (692), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 232/734 (31%), Positives = 361/734 (49%), Gaps = 92/734 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LE +KLL T A A + + L + + DI + A G LSP E+ +R T++A
Sbjct: 40 LEHIKKLLKGTDEAYAADRLKGVLSFNGVVDITPAVKRARIGGTLSPQELLGIRTTVQAA 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRAS 132
+ +T SL +P+ LL L+E LE I CID + LD AS
Sbjct: 100 RRIQVYVT--------SLHEENPVETLLYWSEQLSEQRSLENSIKGCIDENAEV-LDSAS 150
Query: 133 EDLELIRAERK----RNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
+L IR E + R E LDS+++ +++ Q LIT R R + +KA ++
Sbjct: 151 TELSQIRRELRSGEVRIREKLDSMIRSSTVSKMLQ-----DQLITIRGDRFVIPVKAEYR 205
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + S SGAT F+EP+ V NN E E IL LTA +A+
Sbjct: 206 SYF-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVAEQADM 264
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ Y +D + +D FA+A A+ M P+++ + ++ +HPL+
Sbjct: 265 LLYDVDILGNLDFIFAKARLAREMKATLPLMNDRGYLKLKKG------RHPLI------- 311
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
PL+ VPID+++ +++TGPNTGGKT +
Sbjct: 312 ---------PLEQ-------------------VVPIDVELGNSYTSIIVTGPNTGGKTVT 343
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL SLM+ +GL++P ++ +L FD I ADIGD QS+EQNLSTFS H++ I+ IL+
Sbjct: 344 LKTIGLLSLMAMSGLFVPVEDESQLCVFDAIYADIGDEQSIEQNLSTFSSHMTNIISILK 403
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
++ +SLVL+DE+G+GTDP+EG ALA SIL+++ V TTHY++L +
Sbjct: 404 NMTPKSLVLLDEVGAGTDPAEGSALAVSILEHIHALGCRMVATTHYSELKAYAYERKGII 463
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF + TL PTYR+L G G SNA IA+ +G +I+ A+ V + R
Sbjct: 464 NASMEFDVATLSPTYRLLVGVPGRSNAFAIAERLGLPGRILDYARGEV-----TEEDQRV 518
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+ SL + R E + A L E+ L + E LD+ L+++ + +++
Sbjct: 519 EHMIASLEQNRLTAEQEREKAEQLRKEMEALRTRHQTE---LDK----LESQRDRMLEKA 571
Query: 608 LNFAKVQIDTVVQDFENQLRDAS--ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
+ A+V +D + E + D A E + +KE + IAA E + T
Sbjct: 572 EDEARVLVDKARSEAEKIITDLRRLAQEEGASVKEHK-LIAARKELDEAEPKQRKKSTAK 630
Query: 666 SSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
S T + G++V V SL K VVE+ G + + VQ G M+++V +++ +
Sbjct: 631 RSITTRTRSIMAGDEVSVHSLNKK-GHVVELTGSKEAI-VQLGIMKMKVSLDDLELL--- 685
Query: 721 KRKNAANPAPRLRK 734
+ A APR++K
Sbjct: 686 --QPAQTTAPRVQK 697
>gi|424779902|ref|ZP_18206788.1| Recombination inhibitory protein MutS2 [Catellicoccus marimammalium
M35/04/3]
gi|422843441|gb|EKU27878.1| Recombination inhibitory protein MutS2 [Catellicoccus marimammalium
M35/04/3]
Length = 790
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 248/846 (29%), Positives = 405/846 (47%), Gaps = 125/846 (14%)
Query: 18 EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
EE Q+ L QT A+ M++ + L + D L+ G + EI + L+
Sbjct: 40 EEVQQALEQTKEAMTMLRLGKELPFLALTDPRQSLSRIKIGASIQALEILNLGHILKNAA 99
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
V +KL E E + + L L++ + L +I CI+ + + D A+E L
Sbjct: 100 QVLRKLEELEEEES-----FPELKALIQQLQPIPSLSGEIHRCINEQGQV-EDSATERL- 152
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDG 193
A+ +R + + ++ +++ + + +IT R R + +KA ++ G
Sbjct: 153 ---AQLRRQIRQCEQQIRGQLSEMIRGKNSRYLSDAVITMRSDRYVIPVKAEYRNQF-GG 208
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
+ + S++G T F+EPK VE NN ++ E E IL+ L EI +EI+
Sbjct: 209 MVHDQSATGQTLFIEPKAIVELNNRRQQMKVEEKEEVQRILAQLIQEIMPHRQEIQQNAY 268
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ ++D+ A+A A M P +S+ SF + +HPLL
Sbjct: 269 HLGQLDVIQAKAKLAAEMKACIPEMSTTQSFSFLQA------RHPLL------------- 309
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
NP + VP DI + E + ++ITGPNTGGKT ++KT+GL
Sbjct: 310 --NP--------------------ETVVPNDIYLGEEFQSLLITGPNTGGKTITLKTVGL 347
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM + G+ +P + FD I+ DIGD QS+EQ+LSTFSGH+ I+ IL+ V R S
Sbjct: 348 LQLMLQTGMAIPVAEESTMTIFDQIMVDIGDEQSIEQSLSTFSGHMKNIIQILDRVGRHS 407
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL+DE+G+GTDP EG ALA +IL L + L + TTHY +L + NA+ EF
Sbjct: 408 LVLLDELGAGTDPQEGAALAIAILNRLLQKGALTLCTTHYPELKVYAYNEPHTCNASMEF 467
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LVERLRPER 542
++TL PTYR+L G+ G SNA I+ +G D +I A++ ++E+L R
Sbjct: 468 DVQTLSPTYRLLIGAPGSSNAFEISLRLGLDPTLITEAKENMDHQTGDLANMIEQLENAR 527
Query: 543 QQHRKSE-LYQSLMEERRKLESQARTA-ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
Q + + E + + E L+ + + A A+ E L +E + EA + +A+ ++AKE
Sbjct: 528 QGYEEKEHAFTEKLSETEALQKELKEAFAAFKKEKAHLLKEAKKEANQVVEKAS-VEAKE 586
Query: 601 TQQVQQELNFAKVQIDT-VVQDFENQLRDASADEINSLIKESESAIA--AIVEAHRPDDD 657
+ Q+L + +DT V++ E A+ ++N L E E + +++ +
Sbjct: 587 ---IIQDLKEKQEHLDTKAVKEHE---LIAAQTQLNHLKSEEEQHLLKNKVLQREKKKQA 640
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
+V G++V V+S G + T+V P D T VQ G ++++ +
Sbjct: 641 LAV------------GDEVLVESYGQR-GTLVR-PFKDGTWEVQLGILKMK--------L 678
Query: 718 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 777
P S+ R +K QE ++ + + S G K SLDLRG R EEA +
Sbjct: 679 PESE-------FTRTKKAQEQQKETTMTTIQRSNSKG-----VKASLDLRGERYEEAMQK 726
Query: 778 ----LDIAL-ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY---GC 829
LD AL A + S + ++HG GTG +++ + ++L+ H + +E +P N G
Sbjct: 727 VEQYLDQALVAGYHS---VTLVHGKGTGALRQGIQKLLQRHRHIDHFEY-APANAGGNGA 782
Query: 830 TVAYIK 835
T+ Y K
Sbjct: 783 TIVYFK 788
>gi|448238979|ref|YP_007403037.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
gi|445207821|gb|AGE23286.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
Length = 792
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 251/832 (30%), Positives = 403/832 (48%), Gaps = 100/832 (12%)
Query: 17 LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
LEE L++T A A+++ PLD + DI L A G LSP E+ V T
Sbjct: 48 LEEVAAWLDETDEAAAVLRLAGYAPLD--GVVDIRPHLKRAAIGGTLSPQELLEVAATSA 105
Query: 74 AVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
A + + + + E G D L Y+ EL++ + LE I ID + LD A
Sbjct: 106 ASRQMKRLIMDLHEEHGGLDRLSTYAD--ELVE----VPALEHDIRRSIDDHGEV-LDAA 158
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S+ L +R + + R E L+++++ +AQ + +IT R R + +K ++
Sbjct: 159 SDRLRSLRGQIRSVEARIREKLENIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYR 214
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+
Sbjct: 215 GAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEP 273
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ ++ + +D AFA+A +A+ + P ++S+ ++ F + +HPLL
Sbjct: 274 LARAVESLAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL------- 320
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
D E + VP DI++ + +VITGPNTGGKT +
Sbjct: 321 -------------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVT 352
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 353 LKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILR 412
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V ESLVL DE+G+GTDP EG ALA +IL + R V TTHY +L
Sbjct: 413 HVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGSRTVATTHYPELKAYGYNRPGVV 472
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V + H
Sbjct: 473 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV-----SAESHNV 527
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+ SL +++ E + A + E L E E + ++L+ A A+ TQ+
Sbjct: 528 ENMIASLERSKKQAEEEEARARAALEEAERLRAEWEQKWEELEEEKAERLAEATQKAADI 587
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
+ A+ + + ++Q+ ++ A+ + E++ +AA A + ++ S
Sbjct: 588 IRAAEREAERIIQELRRLQKEKQAEVKEHELVEAKKRLAA---AMPKVEKRKKAKKAASR 644
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
Q G++V V SL K + +V DD VQ G +++++++ ++ I S N
Sbjct: 645 HVFQPGDEVKVTSLNQKGYLIEKV--SDDEWQVQLGILKMKIRERDLEYI-GSAPANDVT 701
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACW 785
P ++ + A S E LDLRG R E+A +L+ L A
Sbjct: 702 PIATVKGK-------DAHVSLE--------------LDLRGERYEDALLRLEKYLDDAVL 740
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
+ + +IHG GTG +++ V + L+ H V ++ + + G T+ +K
Sbjct: 741 AGYARVSIIHGKGTGALRQGVQQFLKQHRAVKSFRFGEANEGGTGVTIVELK 792
>gi|323142314|ref|ZP_08077146.1| MutS2 family protein [Phascolarctobacterium succinatutens YIT
12067]
gi|322413198|gb|EFY04085.1| MutS2 family protein [Phascolarctobacterium succinatutens YIT
12067]
Length = 793
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 239/815 (29%), Positives = 386/815 (47%), Gaps = 96/815 (11%)
Query: 21 QKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
++L +T+ AL ++ + + +I + A G +L P E+ ++ T++A ++
Sbjct: 44 KRLQEETAEALRILDEGRRFPFGGAFNITADVKRAELGSVLEPEELQHIQTTVQAFASMK 103
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ ++++ L E + LE++IG ID + I D AS L +R
Sbjct: 104 -------DFTAENVETAPNLAEYGAELTQFSRLEKQIGSAID-EYGEIKDNASPKLGGLR 155
Query: 140 AE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
A + R E LDS+L Q + I +T R R + +K +K P GI
Sbjct: 156 AAIQIAKNRVKEKLDSILHDPNNQKYFMDNI----VTMRGDRYVIPVKQEYKMNFP-GIV 210
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S +GAT F+EP V NN R E E IL LT + + + ++
Sbjct: 211 HDQSGTGATLFIEPLAVVNLNNDIKRYVAEEHEEMERILRQLTQNVGAEAKALLASLEIF 270
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D+ ARA AQ V P+L + I +HPLL
Sbjct: 271 TTLDVICARALLAQEQHAVRPMLV------LSGGVEIAQGRHPLL--------------- 309
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
P D VP+++++ + +++ITGPNTGGKT ++K +GL +
Sbjct: 310 -P-------------------KDTVVPLNVQLGDKFTMLLITGPNTGGKTVALKAVGLFA 349
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM++ GL++PA + ++P F + ADIGD QS+EQ+LSTFS H++ ++ IL V LV
Sbjct: 350 LMAQIGLFIPASS-AKMPVFRAVYADIGDEQSIEQSLSTFSAHMTNLIRILNEVKAGDLV 408
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
LIDEI +GTDP+EG ALA ++L++L ++ L +VTTHY++L ENA+ EF
Sbjct: 409 LIDEICAGTDPNEGAALAMAMLEHLHEQGVLTMVTTHYSELKTFAYGHEGMENASVEFDP 468
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSL 554
+LRPTYR+L G G SNA NI++ +G II+ A +L+ Q+H E + Q L
Sbjct: 469 VSLRPTYRLLMGVPGSSNAFNISRRLGLAEDIIKNAGELL------NQEHVHMENVLQEL 522
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
ERR+ ES ++ L E L + + +RR + K +Q + ++ +
Sbjct: 523 DSERRRYESGSKEIEDLRRESEQLRNALAYSKSEFERRKNEMLRKAREQADEIYRRSRRE 582
Query: 615 IDTVVQ-------DFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
+ V++ DF+ + + +A+E + ++ S A + E S+
Sbjct: 583 SEAVLKELRSMKADFDTKRLEQAAEEARKKLNKTLSEDAPLPEG-----------APLSA 631
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
T + G V V SLG K + +V G+D TV V KM V KK + + +
Sbjct: 632 KTAKKGLNVFVVSLG-KNGIITDVNGNDVTVQVGILKMTVPAKKC----LLTKAQPAHTD 686
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACW 785
AP+ RK S +A ++ + + ++K +DLRGM ++EA +D A+ A
Sbjct: 687 AAPKKRKG----FSKNAAANYAHQMFIAKSGSAKQEIDLRGMTLDEAIPVVDKAIDDALI 742
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
L +IHG GTG ++ + L + V K E
Sbjct: 743 AGIGQLRLIHGKGTGALRAGLTAYLSTNRFVKKLE 777
>gi|317498567|ref|ZP_07956860.1| MutS2 family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894054|gb|EFV16243.1| MutS2 family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 800
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 230/783 (29%), Positives = 370/783 (47%), Gaps = 106/783 (13%)
Query: 60 LSPSEICAVRRTLRAVNN-VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
L E+ + R L +V N V + +L+ DSL EL ++ L +L +I
Sbjct: 84 LGTGELLDIARVLESVKNAVSYGVRMEDDLEADSLD------ELFESLVPLDDLLHEIRR 137
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
CI + I D AS L+ IR K+ + + + L + + + ++T R R
Sbjct: 138 CIISEEEIS-DDASSTLKHIRRAMKQTNQKIHTQLTTLVSSASNQDKLQDAIVTMRNGRY 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
C+ +K ++ G+ + S+SG T F+EP V NN L E +E ILS+L+
Sbjct: 197 CIPVKQEYRSSFQ-GMIHDQSASGNTLFIEPMSVVTLNNELKELEGKEQSEIEHILSILS 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
+ + ++ + ++ +D FA+A +A+ +D PI D INI+ HP
Sbjct: 256 EQASYGVDDLAHNQKTLVLLDFIFAKAKYAKDIDASKPIFRE------DGIINIKQGCHP 309
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LL + VPI++ + + ++++TG
Sbjct: 310 LLDRKKV-----------------------------------VPINVSLGKDFSMLIVTG 334
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT S+KT+GL SLM +AGL++PA L F I ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTVSLKTVGLLSLMGQAGLHIPAFQGSSLGIFREIFADIGDEQSIEQNLSTFSSH 394
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV I++ R+SLVL+DE+ GTDP EG ALA SIL L R + TTHY++L
Sbjct: 395 MTNIVSIVQQAHRDSLVLLDELCGGTDPIEGAALAISILSDLHGRGIKTMATTHYSELKM 454
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
ENA+ EF +ETL PTYR++ G G SNA I++ +G D II+ A ++
Sbjct: 455 FALSTNDIENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDEHIIEGAADQIDES 514
Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
+ +++++ + LE +T EI++ +EIE + L R ++K
Sbjct: 515 VKD---------FETILAD---LEKSKQTIEKEQEEILEYRKEIETLRRSLKSRQDNIKE 562
Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD-- 656
K + ++ A+ + ++ + + ++ D++ E N L K++++ A H D
Sbjct: 563 KRDKMLRD----AREEAHNIISEAK-EIADSTIREYNKLKKQNKNPDANKKMEHMRSDLR 617
Query: 657 ---------------DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
+ + F G++V+V SL TV +P + VQ
Sbjct: 618 GRMTKLEGQMAYKSKKKNKKRHEANDF--HVGDEVYVTSLS-LAGTVSTLPNAKGDLYVQ 674
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G MR V NI+ + +K A R ++ E R G + N+ AS P +
Sbjct: 675 MGMMRSLV---NIKDLEITK---TAKDVKRENQRNESRNRGRT-AINKSASIRPEI---- 723
Query: 762 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKE---RVLEILRNHPRV 816
++ GM V+EA QLD I AC + + + V+HG GTG +++ + L+ R+
Sbjct: 724 ---NVMGMTVDEAIAQLDKYIDDACLANLAQITVVHGKGTGALRKGLHNYFKQLKKQKRI 780
Query: 817 AKY 819
+ Y
Sbjct: 781 SGY 783
>gi|335038522|ref|ZP_08531758.1| MutS2 protein [Caldalkalibacillus thermarum TA2.A1]
gi|334181583|gb|EGL84112.1| MutS2 protein [Caldalkalibacillus thermarum TA2.A1]
Length = 787
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 242/804 (30%), Positives = 393/804 (48%), Gaps = 130/804 (16%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVNNVWKKL-TEAAELDGDSLQRYSPL 99
I DI + A+ G L +E+ V +T+ R + + +K+ E EL S L
Sbjct: 68 IRDIRPAVKRAMIGSRLDAAELLDVAQTIAGGRKLKHFLEKVCAEHGEL--------SIL 119
Query: 100 LELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQ 159
L + L ++E+ I CID + +LD AS L+ IR R R+ E +K+ Q
Sbjct: 120 ARLEEQIRPLRDVEQSIKSCID-EHGDVLDSASPALKEIR-NRIRHAEQR---VKRQLEQ 174
Query: 160 IFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
I +A + +P+IT R+ R C+ +KA +++ G+ + S+SGAT F+EP+ V
Sbjct: 175 IVRAPANQKMLQEPIITIRQDRYCIPVKAEYRHHF-GGLVHDQSASGATLFVEPEAVVAI 233
Query: 216 NNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
NN L +++ EE I L+ LT ++ ++ ++K + + E+D FA+A +A+ +
Sbjct: 234 NN---ELREAKLQEEKEIDRILTGLTRQVGEAGEDLKNNVQALAELDFLFAKAYYARSIR 290
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
V P L+ Q + + +HPL+ +
Sbjct: 291 AVQPQLNDQGYFKLIRA------RHPLIPAQDV--------------------------- 317
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
VP ++ E +VITGPNTGGKT ++KTLGL +LM+ +GL++PA+ +
Sbjct: 318 --------VPTTFELGGEYTCMVITGPNTGGKTVTLKTLGLLTLMACSGLFIPAEEGSHV 369
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
+ ADIGD QS+EQ+LSTFS H++ IVDILE + SL+L DE+G+GTDP+EG AL
Sbjct: 370 AVVSGVYADIGDEQSIEQSLSTFSSHMTHIVDILEKMDENSLLLFDELGAGTDPTEGAAL 429
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A +IL ++ R L V TTHY++L NA+ EF ETL+PTYR+L G G S
Sbjct: 430 AMAILDFVHSRGALVVATTHYSELKAYAYSRPGVINASVEFDTETLKPTYRLLVGVPGRS 489
Query: 513 NALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
NA +IA+ +G +II+ A+ + + LR + H +EL + R++ E + A
Sbjct: 490 NAFHIARRLGLKEEIIETAKNQISTDDLRID---HMLAELESA----RKQAEEDRQAAER 542
Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
L E+ L + + + L++ L ++ QQ +Q++ + + ++ R
Sbjct: 543 LKREVEALKQSLAKKEAQLEKEKERLISQAKQQAEQKIERMMKEAERIMAQLREWQRGHQ 602
Query: 631 ADEINSLI---------KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 681
A + + LI KE+ S A ++ RP N +F P G+ V+V +
Sbjct: 603 AVKEHQLIEAKKGLKQLKEAASQQPAGMDKPRP------KRQNGQTFKP--GDDVYVHTF 654
Query: 682 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 741
G K V+E + + VQ G ++++VK +++ I K ++ Q+
Sbjct: 655 GQK-GQVIEKLSEQE-YYVQLGIIKMKVKASDMEKI----------------KTKQTEQA 696
Query: 742 GSAGSSNEEASYGPRVQTSKNS----LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 795
G A RVQT + LD+RG +EA +D L A + +IH
Sbjct: 697 GMA-----------RVQTKTETVGLELDVRGQTTDEAIAAVDKYLDDALLAGYQQVSIIH 745
Query: 796 GMGTGVVKERVLEILRNHPRVAKY 819
G GTG +++ + + LR H RV +
Sbjct: 746 GKGTGQLRKGIQDFLRRHKRVKAF 769
>gi|384044690|ref|YP_005492707.1| MutS2 family protein [Bacillus megaterium WSH-002]
gi|345442381|gb|AEN87398.1| MutS2 family protein [Bacillus megaterium WSH-002]
Length = 660
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 236/753 (31%), Positives = 366/753 (48%), Gaps = 121/753 (16%)
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAG 164
L E+E+ I ID +LD AS+ L IR + + R E L+SL++ +AQ +
Sbjct: 3 LPEVEQTIKMSIDENG-TVLDGASDQLRGIRQKLRSTESRIREKLESLIRSSSAQKMLSD 61
Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
I +T R R + +K ++ GI + SSSGAT F+EP+ V NN L
Sbjct: 62 AI----VTIRNERFVIPVKQEYRSAY-GGIVHDQSSSGATLFIEPQAIVTLNN---ELQE 113
Query: 225 SEIAEETAI------LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
+++ E+ I L++ AE+A R+ YL+ E+D FA+ ++ + P +
Sbjct: 114 AKVKEKQEIERILIALTVQVAEVANELRQNVYLLG---ELDFMFAKGRYSHELKASKPKM 170
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
+ + ++ + KHPL+ + DV
Sbjct: 171 NDRGYIKLVKA------KHPLIA-----------------QEDV---------------- 191
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
V DI++ + +VITGPNTGGKT ++KTLGL +LM++AGL +PA + + F +
Sbjct: 192 --VANDIELGDQYTSIVITGPNTGGKTVTLKTLGLFTLMAQAGLQIPALDGSEMAVFKHV 249
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQ+LSTFS H+ IVDIL+ V ESLVL DE+G+GTDP EG ALA SIL
Sbjct: 250 FADIGDEQSIEQSLSTFSSHMVNIVDILQKVDHESLVLFDELGAGTDPQEGAALAISILD 309
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
+ +R V TTHY +L NA+ EF +ETL PTY++L G G SNA I+
Sbjct: 310 QVYERGARVVATTHYPELKAYGYNREGVVNASVEFDIETLSPTYKLLIGVPGRSNAFEIS 369
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
K +G ++I+RA+ + + ++ + SL + RR+ E + A L E L
Sbjct: 370 KRLGLSAEVIERAKGYI-----GSETNKVENMIASLEDSRRQSEHELEEAEELRKEAQKL 424
Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
++E++ + + + + L K ++ Q + A + + ++ D LR S ++L+
Sbjct: 425 HKELQSQIIEFNEKRDKLYEKAEEKAQATVKAASEEAEKIISD----LRKMSQKN-HALV 479
Query: 639 KESESAIAAIVEAHRPDDDFSVSETNTSSFTP----------QFGEQVHVKSLGDKLATV 688
KE E ++EA + +D +V S P Q G++V V S G K T+
Sbjct: 480 KEHE-----LIEARKRLED-AVPTLEKSKKKPAVPKKQERTLQAGDEVKVLSWGQK-GTL 532
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
VE +++ VQ G M+++VK+ ++ I +S + P ++ G N
Sbjct: 533 VERVSNNEW-QVQMGIMKMKVKEKDLEYI-SSPKPVETKPLATVK--------GKDYHVN 582
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKE 804
E LDLRG R E A +D AL R + +IHG GTG +++
Sbjct: 583 LE-------------LDLRGERYENALIRVEKYIDDALLANYPR--VSIIHGKGTGALRK 627
Query: 805 RVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
V E L+NH V ++ + S G TV K
Sbjct: 628 GVQEYLKNHRSVKNIRFGEASEGGSGVTVVEFK 660
>gi|291524453|emb|CBK90040.1| MutS2 family protein [Eubacterium rectale DSM 17629]
Length = 792
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 236/802 (29%), Positives = 381/802 (47%), Gaps = 100/802 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDS-----LQRYSPLL 100
DI G LN+ +LL IC++ + V + + + D S ++ S L
Sbjct: 79 DIGGALNTT---ELL---RICSLLEVAKRVKAYGRNAMDNEKQDSLSGLFAGIEPVSALC 132
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
+ +K C L+E E I D AS +L IR + + + + L K+
Sbjct: 133 DEIKRC-ILSEEE-------------IADDASPELFKIRKSIRGMNDRIHAQLTKLMNNS 178
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R C+ +KA K +P G+ + SS+G+T F+EP V NN
Sbjct: 179 TTRTYLQDAVVTMRDGRYCLPVKAEAKGNVP-GMMHDQSSTGSTLFIEPMAVVNLNNELK 237
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSS 280
L E E IL+ L+ ++A + ++ + + E+D FA+A A+ +GV P ++
Sbjct: 238 ELFIKEQEEIEKILAALSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAPEFNT 297
Query: 281 QSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP 340
+ H INI +HPLL D +N
Sbjct: 298 EGH------INIRKGRHPLL--------------------DAKNV--------------- 316
Query: 341 VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILA 400
VPID+++ E + ++ITGPNTGGKT S+KT+GL +LM +AGL++PA + +L F+ + A
Sbjct: 317 VPIDVRLGEEYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFA 376
Query: 401 DIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYL 460
DIGD QS+EQ+LSTFS H++ IV ILE SL L DE+ SGTDP+EG ALA SIL L
Sbjct: 377 DIGDEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAISILNRL 436
Query: 461 RDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKS 520
+ + TTHY++L ENA EF++ETL PTYR+L G G SNA I+
Sbjct: 437 HQYGAITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPGKSNAFAISSK 496
Query: 521 IGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYR 580
+G D II+ A+ R +L SL +R+ +E + S AEI L +
Sbjct: 497 LGLDENIIEDAKS-----RINDNDLDFEDLIASLESQRQTIEKEQLEINSYKAEIEKLKK 551
Query: 581 EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE 640
++E++ + +D+ + + ++ + L AK D +++F N+ A ++ + KE
Sbjct: 552 QLEEKNERIDKSKDKILREANEEAYKILQDAKELADKTIRNF-NKYGQGQA-PMSQMEKE 609
Query: 641 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDT 697
+ + + + D + + P+ G+ V V SL K TV +P
Sbjct: 610 RSALRDKMNDKEKKLSDIKKNTAKANHKAPKKLRIGDSVLVLSLNLK-GTVHTLPNAKGD 668
Query: 698 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 757
+ VQ G +R V N++ + + +PA ++ G +GS + +
Sbjct: 669 LYVQMGILRSLVNINDLVLLNDD-----VSPA---------KKYGGSGSKIKMSK----S 710
Query: 758 QTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
+ + ++L G +EA LD L A S + ++HG GTG +++ V +L+
Sbjct: 711 MSVSSEINLIGKTTDEALALLDKYLDDAYIAHLSSVRIVHGKGTGALRKAVHGLLKRTKT 770
Query: 816 VAKYE--QESPMNYGCTVAYIK 835
+A+Y + + G T+A K
Sbjct: 771 IAEYHLGEFGEGDAGVTIATFK 792
>gi|352518027|ref|YP_004887344.1| MutS2 protein [Tetragenococcus halophilus NBRC 12172]
gi|348602134|dbj|BAK95180.1| MutS2 protein [Tetragenococcus halophilus NBRC 12172]
Length = 792
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 247/816 (30%), Positives = 384/816 (47%), Gaps = 117/816 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
+ IE+I + G L+ E+ + R L V L E E D R
Sbjct: 68 IPKIENIQAHMKRIEIGADLNGVELAQISRVLTTTAEVNTFLEELKE-DETPFNRLYAWQ 126
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKV 156
E L L L +++ ID + D ASE+L+ IR R+ ENLD ++
Sbjct: 127 EQL---TALPALRKRLKSAIDEDGRVT-DEASEELKNIRRNITRSEQSIRENLDGIIHGK 182
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
QA + L+T R R + ++ ++ + G+ + SSSG T F+EP VE N
Sbjct: 183 -----QARYLSDALVTMRNERYVIPVRQENRNVF-GGVVHDQSSSGQTLFIEPGQVVEMN 236
Query: 217 NMEVRLSNSEIAE--ETA-ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
N RL +IAE E A ILS L+AE+ S +EI + + + D A+A FA+ +
Sbjct: 237 N---RLRQYQIAERDEIARILSELSAELVPSRKEIMHNAYVIGKFDFMNAKARFAKDLKA 293
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
V P++ +HV F + +HPLL + +
Sbjct: 294 VVPLVDEDNHVYFKQA------RHPLLDQTQV---------------------------- 319
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
+ DI + + + VVITGPNTGGKT ++KTLGL LM +AGL +PA ++
Sbjct: 320 -------IANDIMIGEDYQAVVITGPNTGGKTITLKTLGLLQLMGQAGLPIPAGEDSQMG 372
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F+ + ADIGD QS+EQNLSTFS H++ IVD+L V + SLVL DE+G+GTDP EG ALA
Sbjct: 373 IFNEVFADIGDEQSIEQNLSTFSSHMTTIVDVLNQVDKNSLVLFDELGAGTDPQEGAALA 432
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
+IL L + + TTHY +L + NA+ EF ++TL PTYR+L G G SN
Sbjct: 433 IAILDDLAAKQAYVMATTHYPELKVYGYNRPKTVNASMEFDVDTLSPTYRLLIGVPGRSN 492
Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK--------LESQA 565
A I++ +G D+ +I A+++ + E Q +E+ L E RRK L +
Sbjct: 493 AFEISRRLGLDQTLIDSAKQI---MNGESQD--LNEMITDL-ENRRKMAETEYLELRNYV 546
Query: 566 RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ 625
A LH ++ + Y+ ++ ++ A ++K V+Q AK Q D ++ +
Sbjct: 547 SKAKQLHEDLQEAYQYFYEQKEN---EFAKARSKANDIVEQ----AKDQSDEIITN---- 595
Query: 626 LRDASADEINSLIKESE--SAIAAIVEAHRPDDDFSVSET-NTSSFTPQF--GEQVHVKS 680
LR +KE+E A + + +P+D ++ + QF G++V V
Sbjct: 596 LRKIQQQSGQKNVKENELIQAKGELNQLQQPEDHLKKNKVLQKAKKEKQFKAGDEVLVIP 655
Query: 681 LGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQ 740
+ + ++ + VQ G +++ V + +++ I +K AA P R
Sbjct: 656 YNQRGELLDKI--GKNQWQVQLGILKMDVDEEDLQAIAPTKE--AAGPK---------RH 702
Query: 741 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMG 798
+ SS GP V + LDLRG E+A +LD L A + ++HG G
Sbjct: 703 VSTLNSS------GPHVSS---QLDLRGKHYEDALSELDQYLDAAILAGYPQVTIVHGKG 753
Query: 799 TGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
TG +++ V L+ +P V ++ +P N G A +
Sbjct: 754 TGALRKGVFNYLKKNPSVKNFD-FAPANQGGNGATV 788
>gi|384246104|gb|EIE19595.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coccomyxa subellipsoidea C-169]
Length = 500
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/439 (39%), Positives = 243/439 (55%), Gaps = 55/439 (12%)
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
L L +I CI +LD AS L RA R++N+ L S +++ A + + G ++
Sbjct: 40 LPGLASQIWRCISAGDGRVLDGASSALADTRARRQQNLGELRSTIEEWARSMHRLGAAER 99
Query: 169 PLITKRRSRMCVGIKASHKYLLPDG-IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
+ RR R+CV +KA + LP G + L SS+GAT++M+P V NN E L+ E
Sbjct: 100 AQVVVRRDRLCVALKAGRQSDLPKGSVTLATSSTGATFYMDPAPTVPLNNAEAVLAAQER 159
Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
E IL+ L+A +A + I ++D V +D+ AR A W GV
Sbjct: 160 EEVARILAHLSAAVADNAARIWQVLDAVTALDICSARGRHAVWCGGV------------- 206
Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
LR L + N GS+ + + P +D V
Sbjct: 207 ----------------RLRFLLPEVAAQN-------------GSV-QVLQPPPRAVDFTV 236
Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK-----------NHPRLPWFD 396
RVV +TGPNTGGKTAS+K LGLA+LM KAGL+LP + + P + WFD
Sbjct: 237 PAGVRVVTVTGPNTGGKTASLKALGLAALMPKAGLFLPLEPTPGKGPPTPFDAPAVAWFD 296
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
++LAD+GD QSL+Q+LSTFSGHI R+ IL ++R SLVL+DE GSGTDP+EG ALA+++
Sbjct: 297 MVLADVGDGQSLQQSLSTFSGHIRRVRAILAALTRRSLVLLDEAGSGTDPAEGAALASAL 356
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L L DR L + TTH+A L L D+RF NA EF L +LRPTYR++WGS G SNAL
Sbjct: 357 LAALADRAALTLATTHHASLKDLAANDSRFCNAGVEFDLASLRPTYRLIWGSVGASNALA 416
Query: 517 IAKSIGFDRKIIQRAQKLV 535
+A+ +GFD ++ A+K+
Sbjct: 417 VAEGLGFDPLVVAEARKVC 435
>gi|154482859|ref|ZP_02025307.1| hypothetical protein EUBVEN_00555 [Eubacterium ventriosum ATCC
27560]
gi|149736287|gb|EDM52173.1| MutS2 family protein [Eubacterium ventriosum ATCC 27560]
Length = 800
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 248/830 (29%), Positives = 384/830 (46%), Gaps = 107/830 (12%)
Query: 3 HAVVQKAQIPFGKSLEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
HA+V A I ++E+QK QT AL+ + Q L S I +I + G L
Sbjct: 43 HALVPSADI---HEIKENQK---QTGDALSRIWQKGSLSFSGIHNIGESIKRLEIGSTLG 96
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
E+ + L+ V E + DSL ++ + LT L+ I CI
Sbjct: 97 TGELLRIDSLLKVALRVKTFSRRDDEAERDSLD------DMFEAIEPLTNLKNDIERCII 150
Query: 122 CKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSR 177
+ I D AS +L+ IR + K R L SL+ + + + LIT R R
Sbjct: 151 SEDEIA-DDASANLKNIRRQMKITNDRVHSQLSSLINSQSGHTY----LQDALITMRDGR 205
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
CV +K ++ + +GI + SS+G+T F+EP VE NN L E E IL+ L
Sbjct: 206 YCVPVKQEYRGNV-NGIIHDQSSTGSTLFIEPAAVVELNNKLRELEGKEADEIQIILANL 264
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
+ A+ E+K M + ++D FA+A A+ M P + Q INI+ +H
Sbjct: 265 SMACAEHIYELKTDMKILPKLDFIFAKASLAKEMKASMPEFNDQRQ------INIKKGRH 318
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PLL +P K VPIDI + + ++++T
Sbjct: 319 PLL---------------DPKKV--------------------VPIDIHLGKDFNLLIVT 343
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT S+KT+GL +LM +AGL++PA +L F + ADIGD QS+EQ+LSTFS
Sbjct: 344 GPNTGGKTVSLKTVGLLTLMGQAGLHIPAFEGSKLAVFKEVFADIGDEQSIEQSLSTFSA 403
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
H+ V+IL ++SLVL DE+G+GTDP EG AL SIL +L++ + TTHY++L
Sbjct: 404 HMVNTVNILNQADQDSLVLFDELGAGTDPVEGAALGISILTFLKNIGSRIMATTHYSELK 463
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
+NA+ EF +ETLRPTYR+L G G SNA I+ +G II+ A+ ++
Sbjct: 464 LFALSTEGVQNASCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLPDYIIEDAKSHID- 522
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
+ +Q ++ + +R ++E T A ++I L R+ E + + L+ + +
Sbjct: 523 --SDNEQFE--DVLSEIERQRIQIEKDQETIAVYKSQIKSLKRDYELKTEKLNEQRDKIL 578
Query: 598 AKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
K ++ L AK D ++ + + E +++S S + A ++ ++
Sbjct: 579 NKAREEAVDILKEAKETADEAIKTINKYGKSGNTRE----MEKSRSNVGAKLKKNQVGSS 634
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKL-ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
++ + F VK L L TV +P + V+ G + +V NIR
Sbjct: 635 IKAAKPKKAYKPSDFKLGTGVKVLSMNLNGTVASLPNAAGNLTVKMGILNSKV---NIRD 691
Query: 717 I-----PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
+ P+ K AP L + GS G S + + ++L G V
Sbjct: 692 LEIIDEPDIK-------APGLTR-------GSTGKIKMNKSMNIKTE-----INLIGKTV 732
Query: 772 EEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+EA QLD L A ++VIHG GTG ++ V +NH + Y
Sbjct: 733 DEAISQLDKYLDDAYIAHLPQVYVIHGKGTGALRNAV----QNHLKKCSY 778
>gi|242039141|ref|XP_002466965.1| hypothetical protein SORBIDRAFT_01g017480 [Sorghum bicolor]
gi|241920819|gb|EER93963.1| hypothetical protein SORBIDRAFT_01g017480 [Sorghum bicolor]
Length = 831
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 230/754 (30%), Positives = 370/754 (49%), Gaps = 89/754 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIA--GILNSAVSGQLLSPSEICAVRRT 71
S E+SQ+LL +T AA+ ++ + +D S ++ +A ++ G ++ E AV
Sbjct: 85 SYEQSQRLLQETEAAVWLLDNAGGAMDFSGLDTVAIESAIHCVSGGAVIKGLEAMAVASL 144
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
+ V ++ + A +LD S R + L E + + L + I ID + D A
Sbjct: 145 MLFVESLQVNIKAAIKLDEGSRSRLTTLTETILDAVINKSLVKSIQDIIDDDG-SVKDTA 203
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
S +L R + +R L L+ K+ + + I R C+ + +
Sbjct: 204 SPELRRYRDQVQRLESRLYQLMDKLMRNADDEASLSEVCIVN--GRCCIRTTTDNSSIF- 260
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKY 250
DG+ L+ S SGA +EP A+ N+ E++ S + +A+ E +LS LT +I I+
Sbjct: 261 DGLLLS-SGSGAGSMIEPIAAIPLND-ELQESRALVAKAELDVLSKLTDKILLDLDSIQN 318
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILS----SQSHVSFDSSINIEGIK---------- 296
L+ +++D ARA ++ DG P L V+ + ++E I
Sbjct: 319 LLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSATCGSVEQISSAQLPKKAWK 378
Query: 297 -------HPLLL-------GSSLRSLSAASSN------------SNPLKSDVENSEMTVG 330
HPLLL + R +++A++ + L SD+++ ++ V
Sbjct: 379 LYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAEDQLASDLDSMKLRVS 438
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
L K D PVP+D V ET V+VITGPNTGGKT S+KT+GLASLM+K GLY+ A
Sbjct: 439 QLEK---DQPVPVDFMVAEETTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILASEPV 495
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
++PWF+ + ADIGD QSL Q+LSTFSGH+ +I I + ESLVL+DE+G+GT+P EG
Sbjct: 496 KIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESLVLLDEVGAGTNPLEGA 555
Query: 451 ALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
AL S+L+ D L + TTH+ +L LK + FENA EF E L+PT++ILWG
Sbjct: 556 ALGMSLLESFADAGSFLTLATTHHGELKTLKYSNNSFENACMEFDEENLKPTFKILWGIP 615
Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLV--------------ERLRPERQQHRKSELYQSLM 555
G SNA+NIA+ +G I++ ++ L+ ER + E QQH +
Sbjct: 616 GRSNAINIAERLGLPLDIVESSRHLLGTAGAEINALIMDMERFKQEYQQH---------L 666
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL--NFAKV 613
+E + L Q++ LH + + I D +R A + ++ + + F ++
Sbjct: 667 QEAQYLLMQSK---ELHNNLELAQKNIVDHTSAQRKRKARVISEYAVMARSIIRKKFQQL 723
Query: 614 QIDTVVQDF--ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ 671
Q + + E + DA +D + + + SAI + D + ++ + P+
Sbjct: 724 QESAIAERLKEEKAVNDAKSDTVKDHVLANTSAIG---KTQNIDTNLGMATNDDEGGVPE 780
Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
G+ V+V L ++ ATVV++ D V VQ G M
Sbjct: 781 VGDSVYVPKLKNE-ATVVKIDLSKDEVQVQAGMM 813
>gi|304317232|ref|YP_003852377.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302778734|gb|ADL69293.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 786
Score = 270 bits (690), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 235/815 (28%), Positives = 395/815 (48%), Gaps = 98/815 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+L+++ K +++ + A++ + S + I ILN A L+ ++ + R L
Sbjct: 39 NLDKAAKEIDKVNEAVSFISSYGNMSFAFKKIDDILNKAKIKSTLNIGQLMTISRFLSLA 98
Query: 76 NNVWKKL-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
V L +E E + L+ Y+ L L+ +L E+I +++I D S+D
Sbjct: 99 GRVKSYLRSEKEESNYPLLREYNIRLTNLR------DLYERID-----RIVISEDELSDD 147
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPD 192
+ +R ++++ +K I + + P+IT R R V +K ++ +
Sbjct: 148 ASPALKDIRRQKAHINNKIKDTLNSIIASSSKELQDPIITIRNGRYVVPVKQEYRGMFK- 206
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
G+ + SSSGAT F+EP VE NN +L E E ILS LT +I++ EI M
Sbjct: 207 GLIHDQSSSGATLFIEPMTVVELNNDLRQLEIKEQQEIEKILSELTDDISQHISEIHENM 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ E+D+ FA+A ++ + P+ ++ + IN++ +HPLL
Sbjct: 267 IALTELDVIFAKAKYSINTNSSKPVFNTHGY------INLKNARHPLL------------ 308
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
P D VPI + + +VITGPNTGGKT ++KT+G
Sbjct: 309 ----P-------------------KDAVVPISVYLGDSFDTLVITGPNTGGKTVTLKTVG 345
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L +LM+ +GL +P + +FD I DIGD QS+EQ+LSTFS H++ IV IL V+
Sbjct: 346 LLTLMAMSGLNIPTDEGSSVAFFDNIFVDIGDEQSIEQSLSTFSAHMTNIVTILNSVTSN 405
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP+EG ALA SIL +L + TTHY++L K+ ENA+ E
Sbjct: 406 SLVLLDELGAGTDPTEGAALAMSILDFLHRINCRTIATTHYSELKQYALKNDGVENASVE 465
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSEL 550
F +ETLRPTYR+ G G SNA I++ +G + +II A+ + E L+ E ++
Sbjct: 466 FDVETLRPTYRLTIGIPGKSNAFEISRRLGLNEEIIDNARNYITNEELKFE-------DI 518
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
+ L ++R + E L ++ + E E + + + + K ++ ++ L
Sbjct: 519 IKDLEDKRIEAEKAKEEIEDLKRQVNSVKEEYERKRRQTEAERDRIIEKAREKARKILEN 578
Query: 611 AKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
K D ++ +LR+A +D+ N LI+E+ + + ++ SE
Sbjct: 579 TKSTADEIIA----KLREAEKSDKKNKLIEEARKKLKENISEM--EESLKKSEVPVYKKI 632
Query: 670 PQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P+ G+ ++ L D+ T + P D V +Q G +++ V +N+R + + K
Sbjct: 633 PKKVMPGQTFYIVPL-DQTGTALSEPDKDGNVKIQAGILKMNVHISNLREAESDEEK--- 688
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
+L K G A NE++S + T S+DLRG +EEA +++ L A
Sbjct: 689 ----KLEK-------GFATYINEKSS---NIST---SIDLRGKTLEEAEIEVEKYLDDAY 731
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ VIHG GTG+++ + +L+ + V +
Sbjct: 732 LAGLKQVTVIHGKGTGILRSGIARLLKMNKHVKSF 766
>gi|239827968|ref|YP_002950592.1| recombination and DNA strand exchange inhibitor protein
[Geobacillus sp. WCH70]
gi|259511159|sp|C5D5Q8.1|MUTS2_GEOSW RecName: Full=MutS2 protein
gi|239808261|gb|ACS25326.1| MutS2 family protein [Geobacillus sp. WCH70]
Length = 784
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 247/840 (29%), Positives = 392/840 (46%), Gaps = 127/840 (15%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ AAL + PL I DI L A G LSP E+ + T+ A +
Sbjct: 47 QEETDEAVAALRLRGHVPL--GGIFDIRASLKRAKIGGTLSPHELLDIASTISAS----R 100
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+L + E + + + L + L E+++ I CID + +D ASE L IR
Sbjct: 101 QLKQFIESLHEEKEEFPHLAGYAEKLAALPEVQQAIERCIDDHGEV-MDHASERLRSIRQ 159
Query: 141 ERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ + R E L+++++ +AQ + I IT R R + +K ++ + GI
Sbjct: 160 QLRTTEARVREKLENIIRSQSAQKMLSDAI----ITIRNDRYVIPVKQEYRGVY-GGIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP+ VE NN E E IL+ LT+ +A+ + +D +
Sbjct: 215 DQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTSIVAEHAEALLENVDILA 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++D FA+A +A + P+++ + ++ + +HPL+
Sbjct: 275 QLDFIFAKAKYANKLKATKPVMNDRGYIRLLQA------RHPLI---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
D VP DI++ + +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 -------------------DQDVVVPNDIELGKDYTTIVITGPNTGGKTVTLKTIGLLTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA + L F + ADIGD QS+EQ+LSTFS H+ IVDIL V ESLVL
Sbjct: 354 MAQAGLFIPALDGSELAVFRSVYADIGDEQSIEQSLSTFSSHMVNIVDILRNVDHESLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA +IL + R V TTHY +L NA+ EF E
Sbjct: 414 FDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL-- 554
TLRPTY++L G G SNA I+K +G D +II+RA+ + + ++ + L QS
Sbjct: 474 TLRPTYKLLIGIPGRSNAFEISKRLGLDERIIERAKSHIS-AESNKVENMIASLEQSKKR 532
Query: 555 ------------MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
ME + + LH + ++ E + +A D+ R + +E +
Sbjct: 533 AEEEEKKAKEARMEAEKLRSDWEQKWEELHEKRDEIIEEAKRKAADIVRASQ----QEAE 588
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
++ +EL ++Q + + E++L +A K E AI + + +
Sbjct: 589 RIIRELR--RMQKEKQAEIKEHELIEAK--------KRLEEAIPTLEKK-----KKERKK 633
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+F P G++V V SL K V +V DD VQ G +++++ + ++ I S
Sbjct: 634 QTQHAFQP--GDEVKVTSLNQKGYLVEKV--SDDEWQVQLGILKMKINERDLEYI-GSAP 688
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL---- 778
K P ++ + D G LDLRG R E+A +L
Sbjct: 689 KTETKPLATVKGK--DYHVGL-------------------ELDLRGERYEDAIVRLEKYI 727
Query: 779 -DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
D LA + S+ IHG GTG +++ V E L+ H V + + + G T+ +K
Sbjct: 728 DDALLAGYPRVSI---IHGKGTGALRKGVQEFLKKHRSVKNFHFGEANEGGTGVTIVELK 784
>gi|358068271|ref|ZP_09154738.1| hypothetical protein HMPREF9333_01619 [Johnsonella ignava ATCC
51276]
gi|356693530|gb|EHI55204.1| hypothetical protein HMPREF9333_01619 [Johnsonella ignava ATCC
51276]
Length = 846
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 212/719 (29%), Positives = 353/719 (49%), Gaps = 84/719 (11%)
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--I 166
LT+++ +I CI + I + + EL++ + N+ S + V + ++ +
Sbjct: 187 LTQIKNEIARCILSETEISDNASPRLFELVKQHK-----NVQSKMHTVLQSLLESHKEYL 241
Query: 167 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 226
+IT + C+ I+A K + GI + S+SG+T F+EP + FNN E+R E
Sbjct: 242 MDSIITMKDGAYCLPIRADFKNKV-SGIVHDHSASGSTIFIEPMAVIRFNN-ELREIEIE 299
Query: 227 IAEET-AILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
+E IL L++ I +I + + +D +A+A + M P+ + + +
Sbjct: 300 KQQEIDNILEDLSSLIRPYIDDINENIKNMAHLDFVYAKAHLSDAMSASMPVFNDRFY-- 357
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
INI+ +HPL+ P + VPI+I
Sbjct: 358 ----INIKEGRHPLI----------------P-------------------DNIVVPINI 378
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
+ + ++VITGPNTGGKT S+KT+GL +LM ++GL++PA LP F + ADIGD
Sbjct: 379 SIGDDYSLLVITGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFEGSSLPVFKNVYADIGDE 438
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+EQ+LSTFSGH+ IVDI++ R SL L DE+G+GTDP+EG ALA ++L +L +
Sbjct: 439 QSIEQSLSTFSGHMKNIVDIIKKADRSSLCLFDELGAGTDPAEGAALAIALLSHLHKKGA 498
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ T+HY++L ENA EF++ETLRPTYRI+ G G SNA I++ +G
Sbjct: 499 TVLATSHYSELKIFALNTPGIENACCEFNVETLRPTYRIIIGIPGKSNAFAISRKLGLPE 558
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
II A+K + E + E+ + +R +E++ + + AEI L + E +
Sbjct: 559 YIIDEAKKNI-----EDENMSFEEILTKIEHDRFVIENEKKEINNYKAEIEKLKQTYEKK 613
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 645
+ ++ K + + L+ AK DT + + N+L SA I S +++ +
Sbjct: 614 NSRIQEIRENILEKARLEAENILSLAKETADTTINNI-NKL--TSAKGIGSELEKEREKL 670
Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
++ +S+ N++ G+ V+V S+ K TV +P D + VQ G
Sbjct: 671 RESLKKLEKKPALKISKKNSAKKPKHLRCGDSVYVHSMNLK-GTVSSLPNDKGKLYVQMG 729
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY-GPRVQTSKN 762
+R +V ++I I ++ PA ++ +GS G+S +AS+ P +
Sbjct: 730 ILRSQVSLDDIELIDDT-------PADNVK-----VYAGSKGASLMKASHISPEI----- 772
Query: 763 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
++ GM V+EA LD L A + +IHG GTG +++ + L+ P + Y
Sbjct: 773 --NVIGMNVDEACSALDKYLDDALLSHLKYVRIIHGRGTGALQKGIHAYLKKQPYIKSY 829
>gi|291527503|emb|CBK93089.1| MutS2 family protein [Eubacterium rectale M104/1]
Length = 792
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 234/804 (29%), Positives = 378/804 (47%), Gaps = 104/804 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDG--DSLQRYSPLLELL 103
DI G LN+ +LL + V + ++A + L G ++ S L + +
Sbjct: 79 DIGGALNTT---ELLRICSLLEVAKRVKAYGRSAMDNEKQDSLSGLFAGIEPVSALCDEI 135
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
K C L+E E I D AS +L IR + + + + L K+
Sbjct: 136 KRC-ILSEEE-------------IADDASPELFKIRKSIRGMNDRIHAQLTKLMNNSTTR 181
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ ++T R R C+ +KA K +P G+ + SS+G+T F+EP V NN L
Sbjct: 182 TYLQDAVVTMRDGRYCLPVKAEAKGNVP-GMMHDQSSTGSTLFIEPMAVVNLNNELKELF 240
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
E E IL+ L+ ++A + ++ + + E+D FA+A A+ +GV P ++ H
Sbjct: 241 IKEQEEIEKILAALSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAPDFNTDGH 300
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
INI +HPLL + VPI
Sbjct: 301 ------INIRKGRHPLLDAKKV-----------------------------------VPI 319
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
D+++ E + ++ITGPNTGGKT S+KT+GL +LM +AGL++PA + +L F+ + ADIG
Sbjct: 320 DVRLGEEYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFADIG 379
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQ+LSTFS H++ IV ILE SL L DE+ SGTDP+EG ALA SIL L
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAISILNRLHQY 439
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
+ + TTHY++L ENA EF++ETL PTYR+L G G SNA I+ +G
Sbjct: 440 GAITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPGKSNAFAISSKLGL 499
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 583
D II+ A+ R +L SL +R+ +E + S AEI L +++E
Sbjct: 500 DENIIEDAKS-----RINDNDLDFEDLIASLESQRQTIEKEQLEINSYKAEIEKLKKQLE 554
Query: 584 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 643
++ + +D+ + + ++ + L AK D +++F N+ A ++ + KE +
Sbjct: 555 EKNERIDKSKDKILREANEEAYKILQDAKELADKTIRNF-NKYGQGQA-PMSQMEKERSA 612
Query: 644 AIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
+ + + D + + P+ G+ V V SL K TV +P + V
Sbjct: 613 LRDKMNDKEKKLSDIKKNTAKANHKAPKKLRIGDSVLVLSLNLK-GTVHTLPNAKGDLYV 671
Query: 701 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 760
Q G +R V N++ + + +PA ++ G +GS +++ S
Sbjct: 672 QMGILRSLVNINDLVLLNDD-----VSPA---------KKYGGSGS---------KIKMS 708
Query: 761 K-----NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 813
K + ++L G +EA LD L A + + ++HG GTG +++ V +L+
Sbjct: 709 KSLSVSSEINLIGKTTDEALALLDKYLDDAYIAHLTSVRIVHGKGTGALRKAVHGLLKRT 768
Query: 814 PRVAKYE--QESPMNYGCTVAYIK 835
+A+Y + + G T+A K
Sbjct: 769 KTIAEYHLGEFGEGDAGVTIATFK 792
>gi|429762236|ref|ZP_19294636.1| MutS2 family protein [Anaerostipes hadrus DSM 3319]
gi|429182050|gb|EKY23175.1| MutS2 family protein [Anaerostipes hadrus DSM 3319]
Length = 800
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 233/793 (29%), Positives = 372/793 (46%), Gaps = 126/793 (15%)
Query: 60 LSPSEICAVRRTLRAVNN-VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
L E+ + R L +V N V + +L+ DSL EL ++ L +L +I
Sbjct: 84 LGTGELLDIARVLESVKNAVSYGVRMEDDLEADSLD------ELFESLVPLDDLLHEIRR 137
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
CI + I D AS L+ IR K+ + + + L + + + ++T R R
Sbjct: 138 CIISEEEIS-DDASSTLKHIRRAMKQTNQKIHTQLTTLVSSASNQDKLQDAIVTMRNGRY 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
C+ +K ++ G+ + S+SG T F+EP V NN L E +E ILS+L+
Sbjct: 197 CIPVKQEYRSSFQ-GMIHDQSASGNTLFIEPMSVVTLNNELKELEGKEQSEIEHILSILS 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
+ + ++ + ++ +D FA+A +A+ +D PI D INI+ HP
Sbjct: 256 EQASYGVDDLAHNQKTLVLLDFIFAKAKYAKDIDASKPIFRE------DGIINIKQGCHP 309
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LL + VPI++ + + ++++TG
Sbjct: 310 LLDRKKV-----------------------------------VPINVSLGKDFSMLIVTG 334
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT S+KT+GL SLM +AGL++PA L F I ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTVSLKTVGLLSLMGQAGLHIPAFQGSSLGIFREIFADIGDEQSIEQNLSTFSSH 394
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV I++ R+SLVL+DE+ GTDP EG ALA SIL L R + TTHY++L
Sbjct: 395 MTNIVSIVQQAHRDSLVLLDELCGGTDPIEGAALAISILSDLHGRGIKTMATTHYSELKM 454
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
ENA+ EF +ETL PTYR++ G G SNA I++ +G D II+ A ++
Sbjct: 455 FALSTDDIENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDEHIIEGAADQIDES 514
Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
+ +++++ + LE +T EI++ +EIE K L R ++K
Sbjct: 515 VKD---------FETILAD---LEKSKQTIEKEQEEILEYRKEIETLRKSLKSRQDNIKE 562
Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA-IAAIVEAHRPD-- 655
K + ++ A+ + ++ + + ++ D++ E N L K++++ +E R D
Sbjct: 563 KRDKMLRD----AREEAHNIISEAK-EIADSTIREYNKLKKQNKNPDTNKKMEHMRSDLR 617
Query: 656 ------------------------DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 691
+DF V G++V+V SL TV +
Sbjct: 618 GRMTKLEGQMAYKSKKKNKKRHEANDFHV------------GDEVYVTSLS-LAGTVSTL 664
Query: 692 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 751
P + VQ G MR V NI+ + +K A R ++ E R G + N+ A
Sbjct: 665 PNAKGDLYVQMGMMRSLV---NIKDLEITK---TAKDVKRENQRNESRNRGRT-AINKSA 717
Query: 752 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKE---RV 806
S P + ++ GM V+EA QLD I AC + + + V+HG GTG +++
Sbjct: 718 SIRPEI-------NVMGMTVDEAIAQLDKYIDDACLANLAQITVVHGKGTGALRKGLHNY 770
Query: 807 LEILRNHPRVAKY 819
+ L+ R++ Y
Sbjct: 771 FKQLKKQKRISGY 783
>gi|377809473|ref|YP_005004694.1| mutS2 family protein [Pediococcus claussenii ATCC BAA-344]
gi|361056214|gb|AEV95018.1| mutS2 family protein [Pediococcus claussenii ATCC BAA-344]
Length = 786
Score = 270 bits (689), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 226/788 (28%), Positives = 390/788 (49%), Gaps = 89/788 (11%)
Query: 51 LNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLT 110
+++ ++GQ LS +I V RT R V + + L +LD L + S EL+ +
Sbjct: 80 IDAVLNGQELS--QIGNVLRTTRNVTDFFSDLENDDQLDMRILDQTSQ--ELVT----VP 131
Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
++E+++ ++ + + AS DL +R+ R + ++K+ + A + +P+
Sbjct: 132 DVEQRLSRSLEGNGHLT-NAASPDLAYLRSTITRIENEIRQKMEKLT-RGNNAKYLSEPI 189
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
+T R R + +K ++ L G+ + S+SG T ++EP+ VE NN + + + EE
Sbjct: 190 VTIRNERFVLPVKTEYRSKLG-GVVHDQSASGQTLYIEPEAVVELNNDLRQNQVAVVHEE 248
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
I L+ E+ R+ D +L DL A+A +A I +++ +S D+
Sbjct: 249 QRIFQELS-ELVAPHRDTLKQNDHILGHFDLLNAKARYA------AKIKATEPKISEDNQ 301
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
IN+ +HPL+ + + VG+ DI++
Sbjct: 302 INLRKARHPLI-----------------------DPKRVVGN------------DIRLGK 326
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ + ++ITGPNTGGKT S+KT+GL LM ++G+++PA + + FD I ADIGD QS+E
Sbjct: 327 DFKTLIITGPNTGGKTISLKTVGLLQLMGQSGIFIPANENSTIGIFDEIFADIGDEQSIE 386
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
QNLSTFS H+ I+ IL + SLVL DE+G+GTDP EG ALA +IL +R+ L +
Sbjct: 387 QNLSTFSSHMDNIIHILAQIDNNSLVLFDELGAGTDPKEGAALAIAILDDVRNHASLVMA 446
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L + + NA+ EF++ETL+PTY++L G G SNA +I+ +G D ++I
Sbjct: 447 TTHYPELKTYGYERSETINASMEFNVETLKPTYKLLIGIPGQSNAFDISSRLGLDNRLIS 506
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
+A+ LV ++ + + + L + +RK++ + + + I DE L
Sbjct: 507 QARDLV-----DQDSQDLNNMIKDLTDRQRKVDKLYDQLDNTVGQASGYQKTIVDELNTL 561
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI- 648
+ R A L + ++ + ++ +K + D +++ A N LI E++S I A+
Sbjct: 562 NNRRAQLLEQAKEEANRIVDNSKSEADGIIKRLRKMESAGVAFRENDLI-EAKSNINALR 620
Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
E++ + N +F ++V V S G + + +V DD VQ G ++++
Sbjct: 621 QESNLKRNKVLRRAKNKQTF--HVNDEVIVSSYGQRGELLRKV--DDKHWEVQMGIIKMK 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V + + + K K ++ A R +GSAG + +LDLRG
Sbjct: 677 VSTDEMEKVDPEKSKPVSHRASVQR-------TGSAG--------------IRATLDLRG 715
Query: 769 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA + D I A + +IHG GTG ++ + + L+++ R+ +E +P N
Sbjct: 716 KRYEEAMTETDRYIDAALLAGYDQVTIIHGKGTGALRTGITKYLQSNRRIKGFEY-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 AGGNGATI 782
>gi|288553660|ref|YP_003425595.1| recombination and DNA strand exchange inhibitor protein [Bacillus
pseudofirmus OF4]
gi|288544820|gb|ADC48703.1| MutS2 recombination and DNA strand exchange inhibitor protein
[Bacillus pseudofirmus OF4]
Length = 788
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 237/832 (28%), Positives = 403/832 (48%), Gaps = 121/832 (14%)
Query: 20 SQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL---RAVN 76
SQK ++ + L + PL I D+ A G L+ E+ + T+ R +
Sbjct: 45 SQKETSEGATVLRLKGHVPL--GGIFDVTAHAKRAQIGGALAAGELIEIASTIYGGRQLK 102
Query: 77 NVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE 136
+ + E EL+ L Y+ +E L T++E + CID + LD AS L
Sbjct: 103 KFIETMVEEEELELPHLYYYTQQIEPL------TDVERAVKQCIDDNGHV-LDSASPALR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + + ++ S L+ + + ++T R R + +K ++ GI
Sbjct: 156 TIRQQVRSYESSVRSKLESITRSSNTQKMLSDAIVTIRNDRFVIPVKQEYRSAF-GGIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP+ V NN E E IL+ L+A I++ I ++++
Sbjct: 215 DQSASGATLFIEPQAIVTINNQLREAKVKEAHEVERILAELSALISEHAEAILINLEQLA 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++D F++A +A+ + P+L+ + + I+++ +HPLL +
Sbjct: 275 QLDFIFSKAHYAKRIKATAPLLNDRGY------IHLKRARHPLLADEEV----------- 317
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VPID+ + E R ++ITGPNTGGKT ++KT+GL +L
Sbjct: 318 ------------------------VPIDVILGDEYRSLIITGPNTGGKTVTLKTVGLLTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++P + F I ADIGD QS+EQ+LSTFS H++ IVDIL V +SLVL
Sbjct: 354 MAQSGLHVPVDEESEVAVFKQIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVDFQSLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP+EG ALA SIL + R V TTHY++L NA+ EF +E
Sbjct: 414 FDELGAGTDPTEGAALAISILDDVYKRGACVVATTHYSELKGYAYNREGAMNASVEFDVE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTYR+L G G SNA I++ +G D +II+ A+ E++ E Q ++++
Sbjct: 474 TLRPTYRLLIGVPGRSNAFAISRRLGLDERIIESAK---EQIDSETNQ------IENMIA 524
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
LE+ ++A S AE ++ ++ E +L + L+ ++ + +++ + AK ++
Sbjct: 525 ---SLETSQKSAESEWAEASEIRKKAETLRNELMAQIEQLEEQKERVLKEAEDKAKAAVE 581
Query: 617 TVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF----- 668
+ ++ E +LR+ + +N +KE + +++A + ++ + T
Sbjct: 582 SAKEEAEFIIGELREMQKEGLN--VKEHQ-----LIDAKKHLEEAAPKLTAKQKKVKKEA 634
Query: 669 -------TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
T + G+ V V S G K + +V ++ VQ G M+++VK ++++ + K
Sbjct: 635 ARAKAKQTIKAGDDVKVLSFGQKGHVIEQV--NEKEYNVQIGIMKMKVKADDLQLLDKPK 692
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL--- 778
+ P +R GS + K LDLRG R E+A ++
Sbjct: 693 QVE-TKPLATVR-----------GSEHH----------VKPELDLRGERYEDAMLKVEKY 730
Query: 779 --DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
D LA + S +IHG GTG +++ V +++ HPR+ K ++ MN G
Sbjct: 731 IDDALLAGYHQVS---IIHGKGTGALRKGVKQLVSKHPRI-KAARDGGMNEG 778
>gi|167767441|ref|ZP_02439494.1| hypothetical protein CLOSS21_01960 [Clostridium sp. SS2/1]
gi|167710733|gb|EDS21312.1| MutS2 family protein [Clostridium sp. SS2/1]
gi|291558723|emb|CBL37523.1| MutS2 family protein [butyrate-producing bacterium SSC/2]
Length = 800
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 232/793 (29%), Positives = 373/793 (47%), Gaps = 126/793 (15%)
Query: 60 LSPSEICAVRRTLRAVNN-VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
L E+ + R L +V N V + +L+ DSL EL ++ L +L +I
Sbjct: 84 LGTGELLDIARVLESVKNAVSYGVRMEDDLEADSLD------ELFESLVPLDDLLHEIRR 137
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
CI + I D AS L+ IR K+ + + + L + + + + ++T R R
Sbjct: 138 CIISEEEIS-DDASSTLKHIRRAMKQTNQKIHTQLTTLVSSVSNQDKLQDAIVTMRNGRY 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
C+ +K ++ G+ + S+SG T F+EP V NN L E +E ILS+L+
Sbjct: 197 CIPVKQEYRSSFQ-GMIHDQSASGNTLFIEPMSVVTLNNELKELEGKEQSEIEHILSILS 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
+ + ++ + ++ +D FA+A +A+ +D PI D INI+ HP
Sbjct: 256 EQASYGVDDLAHNQKTLVLLDFIFAKAKYAKDIDASKPIFRE------DGIINIKQGCHP 309
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LL + VPI++ + + ++++TG
Sbjct: 310 LLDRKKV-----------------------------------VPINVSLGKDFSMLIVTG 334
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT S+KT+GL SLM +AGL++PA L F I ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTVSLKTVGLLSLMGQAGLHIPAFQGSSLGIFREIFADIGDEQSIEQNLSTFSSH 394
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV I++ R+SLVL+DE+ GTDP EG ALA SIL L R + TTHY++L
Sbjct: 395 MTNIVSIVQQAHRDSLVLLDELCGGTDPIEGAALAISILSDLHGRGIKTMATTHYSELKM 454
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
ENA+ EF +ETL PTYR++ G G SNA I++ +G D II+ A ++
Sbjct: 455 FALSTDDIENASCEFDVETLSPTYRLMIGIPGKSNAFAISRKLGLDEHIIEGAADQIDES 514
Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
+ +++++ + LE +T EI++ +EIE + L R ++K
Sbjct: 515 VKD---------FETILAD---LEKSKQTIEKEQEEILEYRKEIETLRRSLKSRQDNIKE 562
Query: 599 KETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA-IAAIVEAHRPD-- 655
K + ++ A+ + ++ + + ++ D++ E N L K++++ +E R D
Sbjct: 563 KRDKMLRD----AREEAHNIISEAK-EIADSTIREYNKLKKQNKNPDTNKKMEHMRSDLR 617
Query: 656 ------------------------DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 691
+DF V G++V+V SL TV +
Sbjct: 618 GRMTKLEGQMAYKSKKKNKKRHEANDFHV------------GDEVYVTSLS-LAGTVSTL 664
Query: 692 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 751
P + VQ G MR V NI+ + +K A R ++ E R G + N+ A
Sbjct: 665 PNAKGDLYVQMGMMRSLV---NIKDLEITK---TAKDVKRENQRNESRNRGRT-AINKSA 717
Query: 752 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKE---RV 806
S P + ++ GM V+EA QLD I AC + + + V+HG GTG +++
Sbjct: 718 SIRPEI-------NVMGMTVDEAIAQLDKYIDDACLANLAQITVVHGKGTGALRKGLHNY 770
Query: 807 LEILRNHPRVAKY 819
+ L+ R++ Y
Sbjct: 771 FKQLKKQKRISGY 783
>gi|429766788|ref|ZP_19299030.1| MutS2 family protein [Clostridium celatum DSM 1785]
gi|429182934|gb|EKY24010.1| MutS2 family protein [Clostridium celatum DSM 1785]
Length = 785
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 236/819 (28%), Positives = 388/819 (47%), Gaps = 98/819 (11%)
Query: 12 PFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVR 69
P+ KS+ E +K L +T+ AL ++ + P + D + A G +L+P ++ +
Sbjct: 36 PY-KSIYEVEKKLEETNEALDILIRKGTP-PFEGLHDTRAEIARAAKGGVLTPGQLIKIG 93
Query: 70 RTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
LR + + E G Y L +L L LE +I I + I D
Sbjct: 94 SMLRCSRRFKEYVVRKEEEIG-----YKHLEDLAYILVPLKGLESEIDNAIISEEEIS-D 147
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHK 187
+AS L IR R+++ +S +++ I +A + L T R R + +KA +K
Sbjct: 148 KASGTLYNIR----RSLKEKNSSVREKINSIVRANSKYLQDSLYTMRGDRYVIPVKAEYK 203
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P G+ + SS+GAT F+EP V NN L E AE ILS L++++ +
Sbjct: 204 GAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELMLKEKAEIERILSELSSKVYNNIDV 262
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + + E+D FA+ +A ++ + P + D S +I G KHPL+
Sbjct: 263 VTSNSNILKELDFIFAKGKYASSLNAILP------KIRNDKSFDIIGGKHPLI------- 309
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
VP D+ + E ++ITGPNTGGKT +
Sbjct: 310 ----------------------------DQKIVVPSDVYLGDEFTTLMITGPNTGGKTVT 341
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL LM+ +GL +PAK+ + ++ I ADIGD QS+EQ+LSTFSGH++ IV IL+
Sbjct: 342 LKTVGLLHLMALSGLLIPAKDGSSVGFYKEIFADIGDEQSIEQSLSTFSGHMTNIVTILD 401
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+SLVL DE+GSGTDP+EG ALA +I++ LRDR + TTHY++L + E
Sbjct: 402 DADGDSLVLFDELGSGTDPAEGSALAIAIIETLRDRGARIIATTHYSELKGYALRTIGVE 461
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE---R 542
NA+ EF +ETLRPTYR+L G G SNA I++ +G +I++A+ + E L+ E R
Sbjct: 462 NASVEFDVETLRPTYRLLIGIPGKSNAFEISRRLGLSNDVIEKAKNSMSKENLQFEDLIR 521
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
KS L E +KL +A + + E ++ +I D+A + A L+AK
Sbjct: 522 DLQEKSILANRDAREAKKLRDEAENLKNKYNEKINKLDKIRDKAYE----EARLEAKNI- 576
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
++ AK + D +V+ + A+ + +++ + A +E +
Sbjct: 577 -----ISKAKDEADEIVKAMRELEKMGIAEGGRNRLEQERQKLKASLEEKEAAMIKTREN 631
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
Q G + + SL ++ +V P + V V+ G M++ VK ++R
Sbjct: 632 QGEIIKKVQLGMEAFLPSLNQRV-IIVSNPDNKGEVQVEAGIMKINVKLKDLRK------ 684
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
++ +++ + +DLRGM EEA ++ D L
Sbjct: 685 ----------------VNEEPKKKEKKKREVKLNLKSVDSRIDLRGMDSEEACYRTDKYL 728
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + + ++HG GTG++++ + ++L+ HP V Y
Sbjct: 729 DEAYMSNLGEVTIVHGKGTGILRKAINDMLKRHPHVKSY 767
>gi|255654753|ref|ZP_05400162.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-23m63]
gi|296449499|ref|ZP_06891276.1| exopolyphosphatase [Clostridium difficile NAP08]
gi|296878178|ref|ZP_06902193.1| exopolyphosphatase [Clostridium difficile NAP07]
gi|296261563|gb|EFH08381.1| exopolyphosphatase [Clostridium difficile NAP08]
gi|296430931|gb|EFH16763.1| exopolyphosphatase [Clostridium difficile NAP07]
Length = 792
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 233/811 (28%), Positives = 393/811 (48%), Gaps = 94/811 (11%)
Query: 19 ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E + +L +TS A +++ + + L I DI + A G L P + + TLR
Sbjct: 42 EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
+ L+ + E D + P+++ L N ++ ++E++I I ++ I D AS L
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +++ S L + + + +I+ R R V +KA ++ + GI
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKAEYRSQVA-GIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSGAT F+EP VE NN +L E E ILS L+A + + ++ + +
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D AF++ + M G+ P L+ D +NI+ +HPLL
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ ++ ++ G DF +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA + +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTTDSLVI 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA ++L+ + + TTHY++L + ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
TL PTY++L G G SNA I++ +G +I RA++ + E + E ++ Q++
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALE-------DVLQNV 526
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
+ R K A L EI L E +++ + L + + K + + AK +
Sbjct: 527 EKNRIKAVEDREEAERLKEEIERLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEE 586
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTP 670
+D ++++ + ++ ++ E N I+E + + + + +P VS P
Sbjct: 587 VDIIIKELRSLEQERASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP 646
Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
GE+V V +L +VV V +VQ G M++ + P
Sbjct: 647 --GEEVKVITLNQN-GSVVSVDKKRKEAVVQIGIMKMTL------------------PFK 685
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACW 785
L+K +D + S+ + + KN +DLRG+ +EEA ++ D +A
Sbjct: 686 SLQKTHKDVSTNVTKSTRN--IIRSKSGSVKNEVDLRGLNLEEAIMEVEKYLDDAYVAGL 743
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
ES + VIHG+GTGV+K + +ILR + V
Sbjct: 744 ES---VTVIHGIGTGVLKAGLQDILRRNRHV 771
>gi|423521564|ref|ZP_17498037.1| MutS2 protein [Bacillus cereus HuA4-10]
gi|401177766|gb|EJQ84953.1| MutS2 protein [Bacillus cereus HuA4-10]
Length = 786
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 238/797 (29%), Positives = 379/797 (47%), Gaps = 111/797 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + AE +G L P+L
Sbjct: 65 LGGISDIRSNVKRAKIGSMLSPHELIEIASTMYGSRQMKRFIEDMAE-NGVEL----PIL 119
Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 EGHVAQIISLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
I+K +G ++I RA+ + + + E + E +S ER++ E + + LH
Sbjct: 493 EISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKSAEHERKEAEEHRKQSEKLHR 552
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 553 ELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVN 604
Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDK 684
+ + LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQK 655
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 656 GQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASV 700
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
+ S LDLRG R E+A +++ L A S + +IHG GTG +
Sbjct: 701 KGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGAL 751
Query: 803 KERVLEILRNHPRVAKY 819
++ V + L+ H V Y
Sbjct: 752 RQGVQDYLKKHRGVKNY 768
>gi|302672186|ref|YP_003832146.1| MutS2 family protein [Butyrivibrio proteoclasticus B316]
gi|302396659|gb|ADL35564.1| MutS2 family protein [Butyrivibrio proteoclasticus B316]
Length = 797
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 204/664 (30%), Positives = 322/664 (48%), Gaps = 84/664 (12%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
++T R R CV ++A +K + +GI + SSSG+T F+EP VE NN L E AE
Sbjct: 187 VVTMRDDRYCVPVRAEYKSQI-NGIVHDQSSSGSTLFIEPAAVVELNNKIKELVLQENAE 245
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL L+ ++ + IKY D + ++D FA+A +A ++ + P+ + SFD
Sbjct: 246 IEKILLELSLQVGEHAEAIKYNSDIMTDLDFVFAKASYALEINAISPVFNDNH--SFD-- 301
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
I+ +HPL+ + N + VPID+
Sbjct: 302 --IKKGRHPLI-------------DKNKV----------------------VPIDVYAGK 324
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ +++ITGPNTGGKT ++KT+GL +LM +AGL +PA + L FD + ADIGD QS+E
Sbjct: 325 DFDMLIITGPNTGGKTVTLKTVGLLTLMGQAGLAIPAGDKSELSVFDEVYADIGDEQSIE 384
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ V ILE SL L DE+G+GTDP+EG ALA SIL L +R +
Sbjct: 385 QSLSTFSSHMTNTVKILENADSNSLCLFDELGAGTDPTEGAALAISILNNLHERQVRTLA 444
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY++L +NA+ EF +E+LRPTYR+L G G SNA I+ +G +II
Sbjct: 445 TTHYSELKIYALNTPGIQNASCEFDVESLRPTYRLLIGIPGKSNAFAISSKLGLSEEIIN 504
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
A+ E++ E ++ +L L + R+ +E++ A E+ +L E+ + L
Sbjct: 505 AAK---EQIGTEDKKFE--DLLSDLEKSRKTIENERLEIAQYKREVEELKAELASKTDKL 559
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE-------INSLIKESE 642
D++ + + ++ + L AK D ++ F +A+ + + I
Sbjct: 560 DKQKEEILRQANEEARNILQEAKDLADETIRTFRKAGPNATMQDLERARTNVGQKISAKN 619
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
AI+A EA + S + GE V + S+G + T+ P D + VQ
Sbjct: 620 KAISAKKEAA------NASHPILKESQLKLGESVKIVSMGLR-GTISSKPDKDGNLYVQC 672
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG----PRVQ 758
G MR K NIR + + Q ED ++ S G R
Sbjct: 673 GIMRT---KANIRDL--------------VLVQDEDGKAAMKKFYGRNTSSGKMDLSRAA 715
Query: 759 TSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
+ + ++L G ++A LD L A + + V+HG G G++++ V L++ P V
Sbjct: 716 SIRTEINLIGKNSDDAISALDKYLDDAYMSHLNNVRVVHGKGAGILRQAVHNYLKSVPYV 775
Query: 817 AKYE 820
++
Sbjct: 776 KSFK 779
>gi|164687641|ref|ZP_02211669.1| hypothetical protein CLOBAR_01283 [Clostridium bartlettii DSM
16795]
gi|164603415|gb|EDQ96880.1| MutS2 family protein [Clostridium bartlettii DSM 16795]
Length = 792
Score = 269 bits (688), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 234/820 (28%), Positives = 395/820 (48%), Gaps = 87/820 (10%)
Query: 17 LEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+E + L +TS A A++ + L + I DI A G L P + + LR
Sbjct: 40 FDEVKNTLLETSEAQAILIKRGLVSMDGIHDIEDKAKRAHVGATLDPGALLKIADCLRVA 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNF-LTELEEKIGFCIDCKLLIILDRASED 134
++ + L + E D + P+++ L N + ++E++I I + I D AS
Sbjct: 100 RSLKRNLEGSEEEDFNY-----PIIQALTNALYTFRDIEDRIYTSIVGESEI-SDNASTT 153
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L+ IR + +++ S L + + + +I+ R R + +KA ++ ++ GI
Sbjct: 154 LKTIRRRIVQKNQSIRSKLNSIISSTTYQKYLQDNIISMRGDRFVIPVKAEYRSVVS-GI 212
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+ SSSGAT F+EP VE NN +L E E ILS L+A I + E+ +
Sbjct: 213 VHDQSSSGATLFIEPMSIVEMNNELRKLKLDEQEEIERILSELSAMIGEISGELISNQEI 272
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
+ ++D AFA+ + M + P+L+ + + +I+ +HP++
Sbjct: 273 LGKLDFAFAKGKLSVEMRAIEPVLNEEKY------FHIKNGRHPMID------------- 313
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
K DV VP + + + +VITGPNTGGKT ++KT+GL
Sbjct: 314 ----KRDV------------------VPNTVYLGKDFDTLVITGPNTGGKTVTIKTVGLF 351
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM+++GL++PA + +D + ADIGD QS+EQ+LSTFS H++ V IL V+ +SL
Sbjct: 352 ALMTQSGLHIPADFGTSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNTVSILNEVTSDSL 411
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
V+ DE+G+GTDP EG ALA +IL+ + + TTHY++L ENAA EF
Sbjct: 412 VIFDELGAGTDPVEGAALAIAILEDVNMAGAKCIATTHYSELKNYALTKNGVENAAVEFD 471
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
++TL PTYR+L G G SNA I+K +G +I RA++ + E + ++ Q++
Sbjct: 472 VDTLSPTYRLLIGVPGKSNAFEISKKLGLSEYVINRAKEFINTDNIELE-----DVLQNV 526
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
+ R K E A L EI D+ E E + + + + +K + AK Q
Sbjct: 527 EKNRLKAEEDRLEAEKLKKEIEDIKAEYEGRLERVMAQREKIISKAKSEAFSITRQAKEQ 586
Query: 615 IDTVVQDFENQLRDASADE----INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
+ ++++ + ++ + I +L KE ++ + + + VS P
Sbjct: 587 SENILKELRKLETEMASKQKQQKIEALRKELSDSMGNLQPSVKSMIVPKVSSKEIKDLKP 646
Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
G+ V V +L ++ TVV V LVQ G M++ + P
Sbjct: 647 --GDDVKVVTL-NQDGTVVSVDKKKKEALVQIGIMKMTL------------------PFK 685
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESR 788
L++ Q+D++S ++ + S + K +DLRGM +EEA +++ L AC
Sbjct: 686 SLQQIQKDKKSTVTKTTRKIIS--EKSGKVKGEVDLRGMNLEEAIMEVEKYLDDACVAGL 743
Query: 789 SVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+ +IHG+GTGV+K+ + +IL+ + V + + P YG
Sbjct: 744 ETVTIIHGIGTGVLKKGLQDILKRNKHV---KSKRPGEYG 780
>gi|254974324|ref|ZP_05270796.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-66c26]
gi|255091720|ref|ZP_05321198.1| putative DNA mismatch repair protein [Clostridium difficile CIP
107932]
gi|255313448|ref|ZP_05355031.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-76w55]
gi|255516136|ref|ZP_05383812.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-97b34]
gi|255649232|ref|ZP_05396134.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-37x79]
gi|260682406|ref|YP_003213691.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260686005|ref|YP_003217138.1| DNA mismatch repair protein [Clostridium difficile R20291]
gi|384359986|ref|YP_006197838.1| DNA mismatch repair protein [Clostridium difficile BI1]
gi|260208569|emb|CBA61251.1| putative DNA mismatch repair protein [Clostridium difficile CD196]
gi|260212021|emb|CBE02571.1| putative DNA mismatch repair protein [Clostridium difficile R20291]
Length = 792
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 232/811 (28%), Positives = 394/811 (48%), Gaps = 94/811 (11%)
Query: 19 ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E + +L +TS A +++ + + L I DI + A G L P + + TLR
Sbjct: 42 EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
+ L+ + E D + P+++ L N ++ ++E++I I ++ I D AS L
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +++ S L + + + +I+ R R V +K+ ++ + GI
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSGAT F+EP VE NN +L E E ILS ++A + + ++ + +
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSEISAMVGEVSEDLISNQEILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D AF++ + M G+ P L+ D +NI+ +HPLL
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ ++ ++ G DF +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA + +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA ++L+ + + TTHY++L ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKPGVENAAVEFDIE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
TL PTY++L G G SNA I++ +G +I RA++ + E + E ++ Q++
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALE-------DVLQNV 526
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
+ R K A L EI L E +++ + L + + K + + AK +
Sbjct: 527 EKNRIKAVEDREEAERLKEEIEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEE 586
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTP 670
+D ++++ N ++ ++ E N I+E + + + + +P VS P
Sbjct: 587 VDIIIKELRNLEQERASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP 646
Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
GE+V V +L +VV V +VQ G M++ + +++ RK+ +
Sbjct: 647 --GEEVKVITLNQN-GSVVSVDKKRKEAVVQIGIMKMTLPFKSLQK----TRKDVSTNVT 699
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACW 785
+ + +SGS KN +DLRG+ +EEA ++ D +A
Sbjct: 700 KSTRNIIRSKSGSV----------------KNEVDLRGLNLEEAIMEVEKYLDDAYVAGL 743
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
ES + VIHG+GTGV+K + +ILR + V
Sbjct: 744 ES---VTVIHGIGTGVLKAGLQDILRRNRHV 771
>gi|350267033|ref|YP_004878340.1| MutS2 family protein [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349599920|gb|AEP87708.1| MutS2 family protein [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 785
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 246/836 (29%), Positives = 405/836 (48%), Gaps = 105/836 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
S++E +K L++ A A+++ + + DI G L A G +LSPSE + L A
Sbjct: 39 SIDEIKKQLDEVDEASAIIRLRGQAPFGGLTDIRGALRRAEIGSVLSPSEFTEISGLLYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V + +++ AE DG + PL++ + L++LE I CID + LD ASE
Sbjct: 99 VKQMKHFISQMAE-DGVDI----PLIQQHTEQLITLSDLERDINSCIDDHGEV-LDHASE 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 153 TLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSGAT F+EP+ V+ NN + E E IL +LT + A+ E+
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEQTAEHTEELF 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + +D FA+A +A+ + PI++ V + +HPLL
Sbjct: 268 QDLHVLQTLDFIFAKARYAKAVKATKPIMNDNGFVRLKKA------RHPLL--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P V N DI++ + +VITGPNTGGKT ++K
Sbjct: 313 -------PPDQVVAN-------------------DIELGGDFSTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL +LM+++GL++PA F+ + ADIGD QS+EQ+LSTFS H+ IV ILE V
Sbjct: 347 TLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILEQV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA
Sbjct: 407 NENSLVLFDELGAGTDPQEGAALAMSILDDVHRTHARVLATTHYPELKAYGYNREGVMNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF +ETL PTY++L G G SNA I+K +G II +A+ + + +
Sbjct: 467 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEM-----TAEHNEVDT 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL + +++ E + S+ E L++E++ + +L+ + + + QQ ++
Sbjct: 522 MIASLEQSKKRAEEELSETESIRKEAEKLHKELQQQIIELNSKKDKMLEEAEQQAADKVK 581
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSETNTS 666
A + + ++ + + + + + + LI K E A+ ++ +P+ ++T
Sbjct: 582 AAMKEAEDIIHELRSIKEEHKSFKDHELINAKKRLEGAVPTFEKSKKPEK----TKTQKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
F P G++V V + G K T++E G ++ VQ G ++++VK+ ++ I ++
Sbjct: 638 DFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQIGILKMKVKEKDLEFIKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P P+ K A G S LDLRG R E A ++ D
Sbjct: 688 -PEPKKEKII-------------TAVKGKDYHVSLE-LDLRGERYENALSRVEKYLDDAV 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L+NH V +++ + G TV +K
Sbjct: 733 LAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTVVELK 785
>gi|433655413|ref|YP_007299121.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433293602|gb|AGB19424.1| MutS2 family protein [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 786
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 235/815 (28%), Positives = 394/815 (48%), Gaps = 98/815 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+L+++ K +++ + A++ + S + I ILN A L+ ++ + R L
Sbjct: 39 NLDKAAKEIDKVNEAVSFISSYGNMSFAFKKIDDILNKAKIKSTLNIGQLMTISRFLSLA 98
Query: 76 NNVWKKL-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
V L +E E + L+ Y+ L L+ +L E+I +++I D S+D
Sbjct: 99 GRVKSYLRSEKEESNYPLLREYNIRLTNLR------DLYERID-----RIVISEDELSDD 147
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPD 192
+ +R ++++ +K I + + P+IT R R V +K ++
Sbjct: 148 ASPALKDIRRQKAHINNKIKDTLNYIIASSSKELQDPIITIRNGRYVVPVKQEYRGTFK- 206
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
G+ + SSSGAT F+EP VE NN +L E E ILS LT +I++ EI M
Sbjct: 207 GLIHDQSSSGATLFIEPMTVVELNNDLRQLEIKEQQEIEKILSELTDDISQHISEIHENM 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ E+D+ FA+A ++ + P+ ++ + IN++ +HPLL
Sbjct: 267 IALTELDVIFAKAKYSINTNSSKPVFNTHGY------INLKNARHPLL------------ 308
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
P D VPI + + +VITGPNTGGKT ++KT+G
Sbjct: 309 ----P-------------------KDAVVPISVYLGDSFDTLVITGPNTGGKTVTLKTVG 345
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L +LM+ +GL +P + +FD I DIGD QS+EQ+LSTFS H++ IV IL V+
Sbjct: 346 LLTLMAMSGLNIPTDEGSSVAFFDNIFVDIGDEQSIEQSLSTFSAHMTNIVTILNSVTSN 405
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL+DE+G+GTDP+EG ALA SIL +L + TTHY++L K+ ENA+ E
Sbjct: 406 SLVLLDELGAGTDPTEGAALAMSILDFLHRINCRTIATTHYSELKQYALKNDGVENASVE 465
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSEL 550
F +ETLRPTYR+ G G SNA I++ +G + +II A+ + E L+ E ++
Sbjct: 466 FDVETLRPTYRLTIGIPGKSNAFEISRRLGLNEEIIDNARNYITNEELKFE-------DI 518
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
+ L ++R + E L ++ + E E + + + + K ++ ++ L
Sbjct: 519 IKDLEDKRIEAEKAKEEIEDLKRQVNSVKEEYERKRRQTEAERDRIIEKAREKARKILEN 578
Query: 611 AKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
K D ++ +LR+A +D+ N LI+E+ + + ++ SE
Sbjct: 579 TKSTADEIIA----KLREAEKSDKKNKLIEEARKKLKENISEM--EESLKKSEVPVYKKI 632
Query: 670 PQF---GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P+ G+ ++ L D+ T + P D V +Q G +++ V +N+R + + K
Sbjct: 633 PKKVMPGQTFYIVPL-DQTGTALSEPDKDGNVKIQAGILKMNVHISNLREAESDEEK--- 688
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
+L K G A NE++S + T S+DLRG +EEA +++ L A
Sbjct: 689 ----KLEK-------GFATYINEKSS---NIST---SIDLRGKTLEEAEIEVEKYLDDAY 731
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ VIHG GTG+++ + +L+ + V +
Sbjct: 732 LAGLKQVTVIHGKGTGILRSGIARLLKMNKHVKSF 766
>gi|238925261|ref|YP_002938778.1| DNA mismatch repair protein [Eubacterium rectale ATCC 33656]
gi|259511157|sp|C4ZI07.1|MUTS2_EUBR3 RecName: Full=MutS2 protein
gi|238876937|gb|ACR76644.1| DNA mismatch repair protein [Eubacterium rectale ATCC 33656]
Length = 792
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 234/804 (29%), Positives = 378/804 (47%), Gaps = 104/804 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDG--DSLQRYSPLLELL 103
DI G LN+ +LL + V + ++A + L G ++ S L + +
Sbjct: 79 DIGGALNTT---ELLRICSLLEVAKRVKAYGRSAMDNEKQDSLSGLFAGIEPVSALCDEI 135
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
K C L+E E I D AS +L IR + + + + L K+
Sbjct: 136 KRC-ILSEEE-------------IADDASPELFKIRKSIRGMNDRIHAQLTKLMNNSTTR 181
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ ++T R R C+ +KA K +P G+ + SS+G+T F+EP V NN L
Sbjct: 182 TYLQDAVVTMRDGRYCLPVKAEAKGNVP-GMMHDQSSTGSTLFIEPMAVVNLNNELKELF 240
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
E E IL+ L+ ++A + ++ + + E+D FA+A A+ +GV P ++ H
Sbjct: 241 IKEQEEIEKILAALSDKVAMNAAALEQDYEILSELDFIFAKANLAKSYNGVAPDFNTDGH 300
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
INI +HPLL + VPI
Sbjct: 301 ------INIRKGRHPLLDAKKV-----------------------------------VPI 319
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
D+++ + + ++ITGPNTGGKT S+KT+GL +LM +AGL++PA + +L F+ + ADIG
Sbjct: 320 DVRLGEDYKQLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAADRSKLAIFEDVFADIG 379
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQ+LSTFS H++ IV ILE SL L DE+ SGTDP+EG ALA SIL L
Sbjct: 380 DEQSIEQSLSTFSSHMTNIVKILEKADDRSLCLFDELCSGTDPTEGAALAISILNRLHQY 439
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
+ + TTHY++L ENA EF++ETL PTYR+L G G SNA I+ +G
Sbjct: 440 GAITMATTHYSELKVYALSTDGVENACCEFNVETLSPTYRLLIGIPGKSNAFAISSKLGL 499
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 583
D II+ A+ R +L SL +R+ +E + S AEI L +++E
Sbjct: 500 DENIIEDAKS-----RINDNDLDFEDLIASLESQRQTIEKEQLEINSYKAEIEKLKKQLE 554
Query: 584 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 643
++ + +D+ + + ++ + L AK D +++F N+ A ++ + KE +
Sbjct: 555 EKNERIDKSKDKILREANEEAYKILQDAKELADKTIRNF-NKYGQGQA-PMSQMEKERSA 612
Query: 644 AIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
+ + + D + + P+ G+ V V SL K TV +P + V
Sbjct: 613 LRDKMNDKEKKLSDIKKNTAKANHKAPKKLRIGDSVLVLSLNLK-GTVHTLPNAKGDLYV 671
Query: 701 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 760
Q G +R V N++ + + +PA ++ G +GS +++ S
Sbjct: 672 QMGILRSLVNINDLVLLNDD-----VSPA---------KKYGGSGS---------KIKMS 708
Query: 761 K-----NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 813
K + ++L G +EA LD L A S + ++HG GTG +++ V +L+
Sbjct: 709 KSLSVSSEINLIGKTTDEALALLDKYLDDAYIAHLSSVRIVHGKGTGALRKAVHGLLKRT 768
Query: 814 PRVAKYE--QESPMNYGCTVAYIK 835
+A+Y + + G T+A K
Sbjct: 769 KTIAEYHLGEFGEGDAGVTIATFK 792
>gi|385799733|ref|YP_005836137.1| MutS2 family protein [Halanaerobium praevalens DSM 2228]
gi|309389097|gb|ADO76977.1| MutS2 family protein [Halanaerobium praevalens DSM 2228]
Length = 791
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 246/815 (30%), Positives = 384/815 (47%), Gaps = 118/815 (14%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTE-AAELDGDSLQR-YSPLLELL 103
DI L A G +LS + I VR T+RAV + + L + LD ++R Y + +L
Sbjct: 70 DIREDLKKAAKGSVLSTTAISRVRNTIRAVFELKRYLNGIKSNLDPRIIEREYQKIYDLC 129
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKKVAA 158
+ L +I C++ + + D AS L +RA+ + ++EN LDS++K
Sbjct: 130 SDLQTTPSLAREIDRCLN-EYNEVADEASNKLRSLRAQIE-SIENSIRDKLDSIIKSKKY 187
Query: 159 Q-IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
Q I Q ++T+R +R V +K + DGI S+SG T FMEP V NN
Sbjct: 188 QDILQEN-----IVTRRENRYVVPVKQEKRNSF-DGIVHGQSASGLTLFMEPMAVVRLNN 241
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
+ E E IL +L+++IA+SE IK + + +D A A F+ +D C
Sbjct: 242 QLREVQAKENVEIQRILQMLSSKIAQSENIIKRNLMIISNLDSLAAAAKFS--LDFDC-- 297
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
+Q V+ I ++ +HPLL
Sbjct: 298 --NQPEVNESGIIELKKARHPLL------------------------------------G 319
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
+ PVPID+K+ + +VITGPNTGGKT ++KT+GL +LM++ GL++PA + + F+
Sbjct: 320 EEPVPIDLKLGNDIATLVITGPNTGGKTVALKTVGLLTLMTQTGLHIPAAANSTISIFNK 379
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
I ADIGD QS+EQ+LSTFS H+ RI L +LVL+DE+G GTDP EG AL SIL
Sbjct: 380 IFADIGDEQSIEQSLSTFSSHMHRIRKFLAESDNSTLVLMDELGVGTDPEEGAALGISIL 439
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
+ L+++ + TTHY+ L ENA+ EF L+TL+PTY+++ G G SNA I
Sbjct: 440 EKLQEKKATTIATTHYSQLKSYAYGTEEVENASVEFDLDTLKPTYKLIMGVPGGSNAFEI 499
Query: 518 AKSIGFDRKIIQRAQKL-------VERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
A +G +II RA+ L VE + E Q R YQ L E ++ +
Sbjct: 500 ALRLGIPEEIIDRARSLLSEEEIKVEDIINELNQERNR--YQKLRHEMEAYRNREKELKE 557
Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR--D 628
+ +++ ++ +E R+ A ET++ AK I + NQ D
Sbjct: 558 KYEKMIKEQQQKHEEEIQAARKEAEAIVTETKKE------AKRIISNLKGKNYNQRSEVD 611
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 688
+ N +KE ++ ++EA ++ +S S F + G+QV V S+G K +
Sbjct: 612 RAQTSANQDLKE----LSQVLEAENEKEEAKIS---ASKF--EVGDQVRVHSIGRK-GEI 661
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+ + D +Q G M+V ++ + + N
Sbjct: 662 INIDQDKKEAKIQAGIMQVTASLADLVKV-------------------------DIPTEN 696
Query: 749 EEASY-GPRVQTSKN---SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
EE RVQ S++ LDLRG R E A +++D L A + + ++HG GTG +
Sbjct: 697 EEKQLKNYRVQKSQHVSPKLDLRGERYEAAQYKVDKYLDDAFLAGLNEVEIVHGKGTGAL 756
Query: 803 KERVLEILR--NHPRVAKYEQESPMNYGCTVAYIK 835
++ V E+L +H + + ++ G T+ IK
Sbjct: 757 RQAVEEVLEKSSHAKDYRLGRQKEGGMGVTIVKIK 791
>gi|423090112|ref|ZP_17078447.1| MutS2 family protein [Clostridium difficile 70-100-2010]
gi|357557023|gb|EHJ38589.1| MutS2 family protein [Clostridium difficile 70-100-2010]
Length = 792
Score = 269 bits (687), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 232/811 (28%), Positives = 395/811 (48%), Gaps = 94/811 (11%)
Query: 19 ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E + +L +TS A +++ + + L I DI + A G L P + + TLR
Sbjct: 42 EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
+ L+ + E D + P+++ L N ++ ++E++I I ++ I D AS L
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +++ S L + + + +I+ R R V +K+ ++ + GI
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSGAT F+EP VE NN +L E E ILS L+A + + ++ + +
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D AF++ + M G+ P L+ D +NI+ +HPLL
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ ++ ++ G DF +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA + +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA ++L+ + + TTHY++L + ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
TL PTY++L G G SNA I++ +G +I RA++ + E + E ++ Q++
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALE-------DVLQNV 526
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
+ R K A L EI L E +++ + L + + K + + AK +
Sbjct: 527 EKNRIKAVEDREEAERLKEEIEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEE 586
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTP 670
+D ++++ + ++ ++ E N I+E + + + + +P VS P
Sbjct: 587 VDIIIKELRSLEQERASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP 646
Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
GE+V V +L +VV V +VQ G M++ + +++ RK+ +
Sbjct: 647 --GEEVKVITLNQN-GSVVSVDKKRKEAVVQIGIMKMTLPFKSLQK----TRKDVSTNVT 699
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACW 785
+ + +SGS KN +DLRG+ +EEA ++ D +A
Sbjct: 700 KSTRNIIRSKSGSV----------------KNEVDLRGLNLEEAIMEVEKYLDDAYVAGL 743
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
ES + VIHG+GTGV+K + +ILR + V
Sbjct: 744 ES---VTVIHGIGTGVLKAGLQDILRRNRHV 771
>gi|331701294|ref|YP_004398253.1| MutS2 protein [Lactobacillus buchneri NRRL B-30929]
gi|329128637|gb|AEB73190.1| MutS2 protein [Lactobacillus buchneri NRRL B-30929]
Length = 788
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 237/803 (29%), Positives = 371/803 (46%), Gaps = 111/803 (13%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
I N+++SG LS I + R ++ V ++ L A E+ +L+ +++ L +
Sbjct: 80 IENASLSGTELS--HITKLLRAVQVVTEFFRGLA-AEEV---TLKSVPSIVDRL---TLM 130
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
E+ +++ +D I LD AS L IR N+ S + K + A + +P
Sbjct: 131 PEVTKRMVASVDEDGRI-LDGASSQLRSIRRTIAATQSNIRSKMGKFI-KGSDAKYLSEP 188
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R + IKA +K GI + S+SG T ++EP VE NN R +E AE
Sbjct: 189 IITVRDGRFVLPIKAEYKQRF-GGIIHDQSASGQTLYVEPNNVVEMNNQLRRDQLAERAE 247
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL+ LT I E+ MD V ++D A+A FA V P VS +
Sbjct: 248 VRRILAELTNLIRPHRDELLANMDLVGQLDFVNAKAKFAHATGSVMP------KVSPKNV 301
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
IN+ +HPL+ P V N DI++
Sbjct: 302 INLRKARHPLI----------------PRDQVVAN-------------------DIELGD 326
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ +++TGPNTGGKT ++KT+GL LM ++GL++ A ++ FD + ADIGD QS+E
Sbjct: 327 QYNTIIVTGPNTGGKTITIKTVGLLQLMGQSGLFITANEDSQIGVFDNVFADIGDEQSIE 386
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
NLSTFS H+ I+ IL+ S++SLVL+DE+G+GTDP EG ALA +I+ G +
Sbjct: 387 ANLSTFSSHMDNIISILKQTSKDSLVLLDELGAGTDPKEGAALAMAIIDAFHQIGGELIA 446
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L NA+ EF +ETL+PTYR L G G SNALNIA +G II
Sbjct: 447 TTHYPELKAFAYNRQGIINASMEFDVETLQPTYRFLLGIPGQSNALNIASKLGMPAAIID 506
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
+A+ + + + + + L + ++ +A E L +++D+
Sbjct: 507 QARAFT-----DSENQDINNMIEELTAQTKRAHDEADELDQQLKESTRLQHDLQDKFTKY 561
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-------------ENQLRDASADEINS 636
+ + L + QQ Q + AK + D ++ D EN+L DA +N
Sbjct: 562 ESQKERLVEQAKQQANQVVEEAKKKADRIIDDLHQKQAQVGKVAVKENELIDAKG-ALNQ 620
Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 696
L ++ + DF G+ V VKS G + T++ +
Sbjct: 621 LESAPSLTKNKVLRKEKAKHDF------------HPGDDVLVKSYGQQ-GTLLR-KDKNH 666
Query: 697 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 756
T VQ G ++++++++++ A PA +Q+ Q + S P
Sbjct: 667 TWDVQIGILKMQIEESDLE---------KATPA-----KQDKNQYQTHVSRTRSTGMSP- 711
Query: 757 VQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
+LDLRG R EEA+ ++D I A + +IHG GTG +++ V E L+ +P
Sbjct: 712 ------TLDLRGHRYEEATTEVDRYIDSALLAGYPSVTIIHGKGTGALRKGVTEYLKRNP 765
Query: 815 RVAKYEQESPM--NYGCTVAYIK 835
RV + +P G TV +K
Sbjct: 766 RVKSFGYSAPNAGGDGSTVVKLK 788
>gi|394991851|ref|ZP_10384649.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 916]
gi|393807396|gb|EJD68717.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 916]
Length = 785
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 241/836 (28%), Positives = 407/836 (48%), Gaps = 107/836 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG S+ PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVSI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P+++ D I ++ +HPLL
Sbjct: 269 DVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I++ +G II +A+ + +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521
Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
SL + +++ + + S+ E L++E++ + +L+ + + + Q+ ++L
Sbjct: 522 MIASLEKSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKMMEEAEQKAAEKLE 581
Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
A + + ++++ + + R E+ K A+ A ++ +P+
Sbjct: 582 AAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPER----KTEKKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K A ++E G+ + VQ G ++++VK+ ++ + ++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P P+ K A ++ + Y ++ LDLRG R E A ++ D
Sbjct: 688 -PEPKKEK---------AITAVKGKDYHVSLE-----LDLRGERYENALSRVEKYLDDAV 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L+NH V +++ + G T+ +K
Sbjct: 733 LAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK 785
>gi|336114602|ref|YP_004569369.1| MutS2 family protein [Bacillus coagulans 2-6]
gi|335368032|gb|AEH53983.1| MutS2 family protein [Bacillus coagulans 2-6]
Length = 741
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 243/808 (30%), Positives = 379/808 (46%), Gaps = 101/808 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS I DI L A G L+P E+ + T+ V+ K+ E + +L P+L
Sbjct: 20 LSGIYDIRRHLKRAAIGGRLNPQELVQIASTIH-VSRTMKRFIEGIAEEETAL----PIL 74
Query: 101 ELLKNCN---FLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLL 153
L + LT LE I +D I LD ASE L IR +R E L+ +
Sbjct: 75 TLTSMADRIAVLTPLEHDIRNAVDENGEI-LDTASETLRQIRHGLRGTERRIREKLEGYI 133
Query: 154 K-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
+ K AA++ + +IT R R + +K ++ GI + SSSG T F+EP+
Sbjct: 134 RGKNAAKM-----LSDAIITIRNDRYVIPVKQEYRANY-GGIVHDQSSSGQTLFIEPQSV 187
Query: 213 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
V+ NN E E ILS L+A +A + E+ +++ + + D FA+A + + +
Sbjct: 188 VDLNNQLREWHLKEQQEIERILSELSAAVAAAGGELNTIVEILADFDFMFAKALYGRSIK 247
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
G P++++ +I + +HPLL P
Sbjct: 248 GSKPVINNHG------AIRMFKARHPLL----------------P--------------- 270
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
+D VP DI + + +VITGPNTGGKT ++KT+GL +LM++AGL +PA + +
Sbjct: 271 ----ADKVVPNDITLGQDYTTIVITGPNTGGKTITLKTIGLCTLMAQAGLQIPALDGSEM 326
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
F + ADIGD QS+EQ+LSTFS H++ IV+IL+ V +SLVL DE+G+GTDP EG AL
Sbjct: 327 AVFKEVFADIGDEQSIEQSLSTFSSHMTNIVEILKRVDDQSLVLFDELGAGTDPQEGAAL 386
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A SIL + R V TTHY +L NA+ EF +ETL PTYR+L G G S
Sbjct: 387 AISILDEVYKRGARVVATTHYPELKAYAYNREGVVNASVEFDVETLSPTYRLLIGVPGRS 446
Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 572
NA I++ +G +I AQ L+ E + + +L RR+ E + + A L
Sbjct: 447 NAFEISRRLGLSPSVIAHAQSLIGADTNEVEN-----MIAALESARREAEKERQEAQKLL 501
Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
+ L+ +++ + + R L K ++ + + AK + + +++D ++ A+
Sbjct: 502 EDAEGLHHDLQKQMRQFYARRDELYGKAEKKAAKVVEEAKEKAEEIIRDLRKMQLESKAN 561
Query: 633 EINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEV 691
+KE E A +E P D + Q G++V V S K + +
Sbjct: 562 -----VKEHELIDARKQLEELAPKLDRKPAAKAKKQHVYQPGDEVKVLSFNQKGTLLEQT 616
Query: 692 PGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 751
G + LVQ G ++++VK++++ I P +KQ E + G + +
Sbjct: 617 AGGE--WLVQMGILKMKVKESDMEYI-----------RPPQQKQPEKHLATVRGRDSHVS 663
Query: 752 SYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKERVL 807
LDLRG R E+A +D AL R + +IHG GTG ++ V
Sbjct: 664 L----------ELDLRGERYEDALLKVEKYIDDALLAGYPR--VSIIHGKGTGALRNGVQ 711
Query: 808 EILRNHPRVAKYEQESPMNYGCTVAYIK 835
E L++H V + P G V ++
Sbjct: 712 EFLKHHRAVKRIRLGEPGEGGSGVTIVE 739
>gi|375009800|ref|YP_004983433.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288649|gb|AEV20333.1| hypothetical protein GTCCBUS3UF5_30300 [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 784
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 248/832 (29%), Positives = 404/832 (48%), Gaps = 100/832 (12%)
Query: 17 LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
LEE L +T A A+++ PLD + +I L A G +LSP E+ TL
Sbjct: 40 LEEVAAWLEETDEAAAVLRLAGYAPLD--GVVNIRPHLKRAAIGGVLSPQELVETASTLT 97
Query: 74 AVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
A + + + + E G D L Y+ EL++ + LE I ID + LD A
Sbjct: 98 ASRQMKRLIMDLHEEQGGLDRLSIYAD--ELVE----VPALEHDIRRSIDDHGEV-LDAA 150
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S+ L +R + + R E L+S+++ +AQ + +IT R R + +K ++
Sbjct: 151 SDRLRSLRGQIRSVETRIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+
Sbjct: 207 SAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEP 265
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ ++ + +D AFA+A +A+ + P ++++ ++ F + +HPLL
Sbjct: 266 LARAVESLAALDFAFAKAKYARRLQAAKPAVNNRGYLRFVQA------RHPLL------- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
D E + VP DI++ + +VITGPNTGGKT +
Sbjct: 313 -------------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVT 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 345 LKTVGLLTLMAQAGLFIPAADGSEAAVFRAVYADIGDEQSIEQSLSTFSSHMVNIVDILR 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V +SLVL DE+G+GTDP EG ALA +IL + R V TTHY +L
Sbjct: 405 HVDGQSLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVV 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V + H
Sbjct: 465 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV-----SAESHNV 519
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+ SL +++ E + A + E L E E + ++L+ A A+ TQ+
Sbjct: 520 ENMIASLERSKKQAEEEEARARAALEEAERLRAEWEQKWEELEEEKAERLAEATQKAADI 579
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
+ A+ + + ++Q+ ++ A+ + E++ +AA A + ++ S
Sbjct: 580 IRAAEREAERIIQELRRLQKEKQAEVKEHELVEAKKRLAA---AMPKVEKRKKAKKAASR 636
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
Q G++V V SL K + +V DD VQ G +++++++ ++ I ++ K
Sbjct: 637 HVFQPGDEVKVTSLNQKGYLIEKV--SDDEWQVQLGILKMKIRERDLEYIGSAPAKE-VT 693
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACW 785
P ++ + A S E LDLRG R E+A +L+ L A
Sbjct: 694 PIATVKGK-------DAHVSLE--------------LDLRGERYEDALLRLEKYLDDAVL 732
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
+ + +IHG GTG +++ V + L+ H V ++ + + G T+ +K
Sbjct: 733 AGYARVSIIHGKGTGALRQGVQQFLKQHRAVKSFRFGEANEGGTGVTIVELK 784
>gi|312109983|ref|YP_003988299.1| MutS2 family protein [Geobacillus sp. Y4.1MC1]
gi|311215084|gb|ADP73688.1| MutS2 family protein [Geobacillus sp. Y4.1MC1]
Length = 784
Score = 268 bits (686), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 241/817 (29%), Positives = 382/817 (46%), Gaps = 115/817 (14%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ +AAL + PL I DI L A G LSP E+ + T+ A +
Sbjct: 47 QEETDEAAAALRLRGHVPL--GGIVDIRASLKRAKIGGTLSPHELLDIASTISAS----R 100
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+L + E + + + L + L E+++ I CID + LD ASE L IR
Sbjct: 101 QLKQFIESLHEEKEEFPHLAGYAEKLVALPEVQQAIERCIDDHGEV-LDHASERLRSIRQ 159
Query: 141 ERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ + R E L+S+++ +AQ + +IT R R + +K ++ GI
Sbjct: 160 QLRTTEARVREKLESIIRSPSAQKM----LSDAIITIRNDRYVIPVKQEYRGAY-GGIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP+ VE NN E E IL+ LT +A + + +
Sbjct: 215 DQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTGIVAGHAEALLENVGILA 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++D FA+A +A + P L+ + ++ + +HPL+ ++
Sbjct: 275 QLDFIFAKAKYANKLKATKPALNDRGYIRLLQA------RHPLIDQEAV----------- 317
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP DI++ E +VITGPNTGGKT ++KT+GL +L
Sbjct: 318 ------------------------VPNDIELGKEYTTIVITGPNTGGKTVTLKTIGLLTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA + L F I ADIGD QS+EQ+LSTFS H+ IV+IL V ESLVL
Sbjct: 354 MAQAGLFIPALDGSELAVFRSIYADIGDEQSIEQSLSTFSSHMVNIVEILRDVDHESLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA +IL + R V TTHY +L NA+ EF E
Sbjct: 414 FDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTY++L G G SNA I+K +G +II+RA +L + + + SL +
Sbjct: 474 TLRPTYKLLIGIPGRSNAFEISKRLGLAERIIERA-----KLHISAESNNVENMIASLEQ 528
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
+++ E + + A E L R+ E + ++L + + + ++ + ++ + +
Sbjct: 529 SKKRAEEELKKAEEARMEAEQLRRDWEQKWEELHEKREEIIEEAKRKAADIVRSSQQKAE 588
Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD---------FSVSETNTSS 667
++ + ++ A+ IKE E ++EA + + + T S
Sbjct: 589 RIIHELRRMQQEKQAE-----IKEHE-----LIEAKKRLQEAMPTLEKKKKERKKQATHS 638
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
F P G++V V SL K V +V DD VQ G +++++ + ++ I S K
Sbjct: 639 FQP--GDEVKVISLNQKGYLVEKV--SDDEWQVQLGILKMKINERDLEYI-GSAPKTETK 693
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIAL 782
P ++ + D G LDLRG R E+A +L D L
Sbjct: 694 PLATVKGK--DYHVGL-------------------ELDLRGERYEDALARLEKYIDDALL 732
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + S+ IHG GTG +++ V E L+ H V +
Sbjct: 733 AGYPRVSI---IHGKGTGALRKGVQEFLKTHRAVKSF 766
>gi|385265748|ref|ZP_10043835.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 5B6]
gi|385150244|gb|EIF14181.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 5B6]
Length = 785
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 240/836 (28%), Positives = 407/836 (48%), Gaps = 107/836 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI +
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAH 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P+++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEASVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I++ +G II +A+ + +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521
Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
SL + +++ + + S+ E L++E++ + +L+ + + + Q+ ++L
Sbjct: 522 MIASLEKSKKRADEELSETESIRKEAEKLHKELQQQIIELNDQKDKMMEEAEQKAAEKLE 581
Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
A + + ++++ + + R E+ K A+ A ++ +P+
Sbjct: 582 AAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPER----KTEKKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K A ++E G+ + VQ G ++++VK+ ++ + ++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P P+ K A ++ + Y ++ LDLRG R E A ++ D
Sbjct: 688 -PEPKKEK---------AITAVKGKDYHVSLE-----LDLRGERYENALSRVEKYLDDAV 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L+NH V +++ + G T+ +K
Sbjct: 733 LAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK 785
>gi|313114167|ref|ZP_07799719.1| putative recombination and DNA strand exchange inhibitor protein
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310623576|gb|EFQ06979.1| putative recombination and DNA strand exchange inhibitor protein
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 803
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 239/810 (29%), Positives = 381/810 (47%), Gaps = 126/810 (15%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKLTEAAELDGDSLQRYSPLLE 101
+E+++ + AV G +LS E+ V LR N+ W +E L D +
Sbjct: 68 VENVSQLAARAVKGGVLSMGELLMVAGALRNFQNLSSWYGASEHDALPTD---------D 118
Query: 102 LLKNCNFLTELEEKIGFCI---DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
L LE++I I D + D AS L +R + + ++ L+ +
Sbjct: 119 LFYALAPQPGLEQQISSAILAPDA----MADTASHTLNDLRKKIRATENSIRDRLESMVR 174
Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ + + + +++ R R V +K+ ++ + GI +VSS+GAT F+EP+ VE N
Sbjct: 175 NMDTSKYLQESVVSMRNGRYVVPVKSEYRGEV-SGIIHDVSSTGATVFVEPQAVVEANAR 233
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
++ E E IL TA++A E + +Y +LEID+ A+A A + P
Sbjct: 234 ILQYRAQEAQEIERILVAFTAQVAAIEPQFQYSYKAMLEIDVLLAKARLALDLKAFKPA- 292
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
V D S ++ +HPL+ +P K
Sbjct: 293 -----VRTDDSFSLIRARHPLI---------------DPKKC------------------ 314
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VP+DI + + ++ITGPNTGGKT ++KT GL M++ G +PA + FD
Sbjct: 315 --VPVDIALGRDYDSLIITGPNTGGKTVTLKTAGLLCAMAQCGFLIPADERSEICVFDEF 372
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
L DIGD QS+EQ+LSTFSGH+ +I ILEL +LVL+DE+G+GTDP+EG ALA +I++
Sbjct: 373 LVDIGDEQSIEQSLSTFSGHMKKITGILELAMPHTLVLLDELGAGTDPAEGAALAVAIIE 432
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
LR R L + TTHYA+L + NA+ EF LETLRPTY++ G G SNA I+
Sbjct: 433 ELRRRGVLLMATTHYAELKVFALETKGVVNASCEFDLETLRPTYKLSVGVPGKSNAFLIS 492
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
+ +G ++I+ AQ Q L E ++L++ L ++
Sbjct: 493 EKLGIPERVIEAAQ-------------------QHLSAEDKRLDAVLGQLDDLKLQL--- 530
Query: 579 YREIEDEAKDLDRRAAH-LKAKETQ------QVQQELNFAKVQIDTVVQDFENQ------ 625
+E ++E ++L A+H L+A + + Q + EL A+ + + Q E+Q
Sbjct: 531 -KESQNEVEELKNEASHQLEAAQKKRDELIRQGENELEAARAKARALAQQVESQAYALTD 589
Query: 626 -LRDASADEINSL-----------IKESESAIAAIVEAHRPDDDF-SVSETNTSSFTPQF 672
LR DE S KESE H P +F + E +
Sbjct: 590 ELRQLQKDERMSTQQKAQRAREIAKKESEKLFIGSEAVHNPVKEFVPLKEV-------KV 642
Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 732
G++V + L ++LATV+ +P + VLV+ G ++ +V ++ K P+
Sbjct: 643 GQEVCIAEL-NQLATVLALPDKNGDVLVRAGIIKTKVPLKGLK----QPEKLVKEKKPQT 697
Query: 733 RKQQEDRQSGSAGSSNEEASYGPRVQTS-KNSLDLRGMRVEEASHQLD--IALACWESRS 789
+ QQ R S G +N RVQ S K +L G+ V+EA ++D I A ++
Sbjct: 698 KAQQ--RYSRLTGDANRPNGRVERVQRSAKMECNLLGLTVDEALPEVDSFIDRAILNGQT 755
Query: 790 VLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
V+++IHG GTG ++ + + LR + V +
Sbjct: 756 VVYLIHGNGTGALRTAIHKHLRGNRMVKSF 785
>gi|126698288|ref|YP_001087185.1| DNA mismatch repair protein [Clostridium difficile 630]
gi|123363473|sp|Q189Q3.1|MUTS2_CLOD6 RecName: Full=MutS2 protein
gi|115249725|emb|CAJ67542.1| DNA mismatch repair protein [Clostridium difficile 630]
Length = 792
Score = 268 bits (685), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 232/811 (28%), Positives = 395/811 (48%), Gaps = 94/811 (11%)
Query: 19 ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E + +L +TS A +++ + + L I DI + A G L P + + TLR
Sbjct: 42 EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
+ L+ + E D + P+++ L N ++ ++E++I I ++ I D AS L
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSILR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +++ S L + + + +I+ R R V +K+ ++ + GI
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSGAT F+EP VE NN +L E E ILS L+A + + ++ + +
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D AF++ + M G+ P L+ D +NI+ +HPLL
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ ++ ++ G DF +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA + +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA ++L+ + + TTHY++L + ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
TL PTY++L G G SNA I++ +G +I RA++ + E + E ++ Q++
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALE-------DVLQNV 526
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
+ R K A L EI L E +++ + L + + K + + AK +
Sbjct: 527 EKNRIKAVEDREEAERLKEEIEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEE 586
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTP 670
+D ++++ + ++ ++ E N I+E + + + + +P VS P
Sbjct: 587 VDIIIKELRSLEQERASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP 646
Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
GE+V V +L +VV V +VQ G M++ + +++ RK+ +
Sbjct: 647 --GEEVKVITLNQN-GSVVSVDKKRKEAVVQIGIMKMTLPFKSLQK----TRKDVSTNVT 699
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACW 785
+ + +SGS KN +DLRG+ +EEA ++ D +A
Sbjct: 700 KSTRNIIRSKSGSV----------------KNEVDLRGLNLEEAIMEVEKYLDDAYVAGL 743
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
ES + VIHG+GTGV+K + +ILR + V
Sbjct: 744 ES---VTVIHGIGTGVLKAGLQDILRRNRHV 771
>gi|386759420|ref|YP_006232636.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. JS]
gi|384932702|gb|AFI29380.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. JS]
Length = 785
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 250/843 (29%), Positives = 412/843 (48%), Gaps = 107/843 (12%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
Q+ S++E +K L++ A A+++ + + DI G L A G +LSPSE +
Sbjct: 33 QLKPSASIDEIKKQLDEVDEASAIIRLRGRAPFGGLVDIRGALRRAEIGSVLSPSEFTEI 92
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLII 127
L AV + +T+ AE DG + PL+ + + L++LE I CID +
Sbjct: 93 SGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAEQLITLSDLERDINSCIDDHGEV- 146
Query: 128 LDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
LD ASE L IR + + R + L+S+L+ +A + ++T R R + +K
Sbjct: 147 LDHASEKLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVK 202
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
++ GI + SSSGAT F+EP+ V+ NN + E E IL +LT + A+
Sbjct: 203 QEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEKTAE 261
Query: 244 SEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
E+ +L +VL+ +D FA+A +A+ + P+++ I ++ +HPLL
Sbjct: 262 HTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPMMNDTGF------IRLKKARHPLL-- 312
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
P V N DI++ + +VITGPNTG
Sbjct: 313 --------------PPDQVVAN-------------------DIELGGDFSTIVITGPNTG 339
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGL +LM+++GL++PA F+ + ADIGD QS+EQ+LSTFS H+ I
Sbjct: 340 GKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNI 399
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V ILE V+ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L
Sbjct: 400 VGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYN 459
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
NA+ EF +ETL PTY++L G G SNA I+K +G II +A+ +
Sbjct: 460 REGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEM-----TA 514
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ + + SL + +++ E + S+ E L++E++ + +L+ + + + Q
Sbjct: 515 EHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLHKELQQQIIELNSKKDKMLEEAEQ 574
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFS 659
Q ++ A + + ++ + + + + + + LI K E A+ ++ +P+
Sbjct: 575 QAADKVKAAMKEAEDIIHELRSIKEEHKSFKDHELINAKKRLEGAVPTFEKSKKPEK--- 631
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
++T F P G++V V + G K T++E G ++ VQ G ++++VK+ ++ I +
Sbjct: 632 -TKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQIGILKMKVKEKDLEFIKS 686
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL- 778
+ P P+ K A G S LDLRG R E A ++
Sbjct: 687 A-------PEPKKEKII-------------TAVKGKDYHVSLE-LDLRGERYENALSRVE 725
Query: 779 ----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVA 832
D LA + S +IHG GTG +++ V ++L+NH V +++ + G TV
Sbjct: 726 KYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTVV 782
Query: 833 YIK 835
+K
Sbjct: 783 ELK 785
>gi|423082167|ref|ZP_17070762.1| MutS2 family protein [Clostridium difficile 002-P50-2011]
gi|423085790|ref|ZP_17074229.1| MutS2 family protein [Clostridium difficile 050-P50-2011]
gi|357548912|gb|EHJ30766.1| MutS2 family protein [Clostridium difficile 050-P50-2011]
gi|357549417|gb|EHJ31264.1| MutS2 family protein [Clostridium difficile 002-P50-2011]
Length = 792
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 232/811 (28%), Positives = 394/811 (48%), Gaps = 94/811 (11%)
Query: 19 ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E + +L +TS A +++ + + L I DI + A G L P + + TLR
Sbjct: 42 EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
+ L+ + E D + P+++ L N ++ ++E++I I ++ I D AS L
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +++ S L + + + +I+ R R V +KA ++ + GI
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKAEYRSQVA-GIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSGAT F+EP VE NN +L E E ILS L+A + + ++ + +
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D AF++ + M G+ P L+ D +NI+ +HPLL
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ ++ ++ G DF +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++P + +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPVDYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA ++L+ + + TTHY++L + ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKSGVENAAVEFDIE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
TL PTY++L G G SNA I++ +G +I RA++ + E + E ++ Q++
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALE-------DVLQNV 526
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
+ R K A L EI L E +++ + L + + K + + AK +
Sbjct: 527 EKNRIKAVEDREEAERLKEEIERLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEE 586
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTP 670
+D ++++ + ++ ++ E N I+E + + + + +P VS P
Sbjct: 587 VDIIIKELRSLEQERASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP 646
Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
GE+V V +L +VV V +VQ G M++ + +++ RK+ +
Sbjct: 647 --GEEVKVITLNQN-GSVVSVDKKRKEAVVQIGIMKMTLPFKSLQK----TRKDVSTNVT 699
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACW 785
+ + +SGS KN +DLRG+ +EEA ++ D +A
Sbjct: 700 KSTRNIIRSKSGSV----------------KNEVDLRGLNLEEAIMEVEKYLDDAYVAGL 743
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
ES + VIHG+GTGV+K + +ILR + V
Sbjct: 744 ES---VTVIHGIGTGVLKAGLQDILRRNRHV 771
>gi|406026859|ref|YP_006725691.1| DNA mismatch repair protein MutS [Lactobacillus buchneri CD034]
gi|405125348|gb|AFS00109.1| DNA mismatch repair protein MutS [Lactobacillus buchneri CD034]
Length = 788
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 237/803 (29%), Positives = 370/803 (46%), Gaps = 111/803 (13%)
Query: 50 ILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
I N+++SG LS I + R ++ V ++ L A E+ +L+ +++ L +
Sbjct: 80 IENASLSGTELS--HITKLLRAVQVVTEFFRGLA-AEEV---TLKSVPSIVDRL---TLM 130
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
E+ +++ +D I LD AS L IR N+ S + K + A + +P
Sbjct: 131 PEVTKRMVASVDEDGRI-LDGASSQLRSIRRTIAATQSNIRSKMGKFI-KGSDAKYLSEP 188
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R + IKA +K GI + S+SG T ++EP VE NN R +E AE
Sbjct: 189 IITVRDGRFVLPIKAEYKQRF-GGIIHDQSASGQTLYVEPNNVVEMNNQLRRDQLAERAE 247
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL+ LT I E+ MD V ++D A+A FA V P VS +
Sbjct: 248 VRRILAELTNLIRPHRDELLANMDLVGQLDFVNAKAKFAHATGSVMP------KVSPKNV 301
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
IN+ +HPL+ P V N DI++
Sbjct: 302 INLRKARHPLI----------------PRDQVVAN-------------------DIELGD 326
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ +++TGPNTGGKT ++KT+GL LM ++GL++ A ++ FD + ADIGD QS+E
Sbjct: 327 QYNTIIVTGPNTGGKTITIKTVGLLQLMGQSGLFITANEDSQIGVFDNVFADIGDEQSIE 386
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
NLSTFS H+ I+ IL+ S++SLVL+DE+G+GTDP EG ALA +I+ G +
Sbjct: 387 ANLSTFSSHMDNIISILKQTSKDSLVLLDELGAGTDPKEGAALAMAIIDAFHQIGGELIA 446
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L NA+ EF +ETL+PTYR L G G SNALNIA +G II
Sbjct: 447 TTHYPELKAFAYNRQGIINASMEFDVETLQPTYRFLLGIPGQSNALNIASKLGMPEAIID 506
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
+A+ + + + + + L + ++ +A E L +++D+
Sbjct: 507 QARAFT-----DSENQDINNMIEELTAQTKRAHDEADELDQQLKESTRLQHDLQDKFTKY 561
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-------------ENQLRDASADEINS 636
+ + L + QQ Q + AK + D ++ D EN+L DA +N
Sbjct: 562 ESQKERLVEQAKQQANQVVEEAKKKADRIIDDLHQKQAQVGKVAVKENELIDAKG-ALNQ 620
Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 696
L ++ + DF G+ V VKS G + T++ +
Sbjct: 621 LESAPSLTKNKVLRKEKAKHDF------------HPGDDVLVKSYGQQ-GTLLR-KDKNH 666
Query: 697 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 756
T VQ G ++++++++++ A PA +Q+ Q + S P
Sbjct: 667 TWDVQIGILKMQIEESDLE---------KATPA-----KQDKNQYQTHVSRTRSTGMSP- 711
Query: 757 VQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
+LDLRG R EEA ++D I A + +IHG GTG +++ V E L+ +P
Sbjct: 712 ------TLDLRGHRYEEAMTEVDRYIDSALLAGYPSVTIIHGKGTGALRKGVTEYLKRNP 765
Query: 815 RVAKYEQESPM--NYGCTVAYIK 835
RV + +P G TV +K
Sbjct: 766 RVKSFGYSAPNAGGDGSTVVKLK 788
>gi|372324775|ref|ZP_09519364.1| Recombination inhibitory protein [Oenococcus kitaharae DSM 17330]
gi|366983583|gb|EHN58982.1| Recombination inhibitory protein [Oenococcus kitaharae DSM 17330]
Length = 795
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 246/828 (29%), Positives = 401/828 (48%), Gaps = 125/828 (15%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR---AVNNV 78
LL QT AL + + + L + D+ I +L+ SE+ + +L+ AV +
Sbjct: 46 LLGQTDDALLIDRRRGGLPIRATNDLTEIFKRIKLKAVLASSELADLNASLQSSQAVIDF 105
Query: 79 WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
++ + + E+ D+LQ+ +L L+ ++L +++ ID + + LD AS+ L I
Sbjct: 106 FQTIKD--EIWFDNLQQ---ILFLVNRLTDFSQLSQRLDQTIDDQGKM-LDTASKKLAHI 159
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R + N+ LL K+ A + + +IT R + + +KA +K G+ +
Sbjct: 160 RKNTQLTETNIRELLLKMTKG-NDAKYLSENVITTRDGVLVLPVKAENKKHFG-GVVHDQ 217
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S SG T ++EP+ AV N+ L E E AIL ++ + ++K + + E+
Sbjct: 218 SQSGLTLYIEPEAAVSLNDHLHDLEIDERREINAILIDISQSLFPLYEQLKLNNELIGEL 277
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
DL A+A A MD + P ++S+ I+++ +HPLL
Sbjct: 278 DLIQAKARLANTMDAIKPQINSEKE------IDLQAARHPLL------------------ 313
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
SD V DIK+ + ++ITGPNTGGKT MKTLGL LM+
Sbjct: 314 PSDA------------------VANDIKLGHDFISLIITGPNTGGKTVLMKTLGLLQLMA 355
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
++G+++ A + + FD I ADIGD QSLEQ+LSTFS H+ I +I+ +SLVL+D
Sbjct: 356 QSGIFITADKNSSIYVFDNIFADIGDEQSLEQSLSTFSSHMMNIKEIIADSDTDSLVLLD 415
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDPSEG ALA +I++ L +R L + TTHY +L D+ NA+ EF L+TL
Sbjct: 416 ELGAGTDPSEGAALAMAIVENLSERKILNLTTTHYPELKVFADQKPFAVNASMEFDLKTL 475
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
RPTYR+L G G SNA+ IA+ +G D+++++RA+ V+ P+ Q+ + L Q L+ +R
Sbjct: 476 RPTYRLLIGIPGQSNAITIARRLGVDKRVLERAEAYVD---PKDQE--LNNLIQGLVFQR 530
Query: 559 RKLESQARTAASLHAEIMDLYREIED---EAKDLDRRAAHL---KAKETQQVQQELNFAK 612
+ L+ Q DL R + D E ++LDR+++ L KAK + E N
Sbjct: 531 QDLDQQQE----------DLQRRLADVNSEKENLDRQSSELEQSKAKLLLDAKNEANHIV 580
Query: 613 VQIDTVVQDFENQLRD----------ASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
+ + +Q+R + E+N ++ + + R +D ++
Sbjct: 581 ASTRSESKKLLDQIRSERLKAGQGSGKNEQELNRIVNQFDKL--------RQNDSLEKNK 632
Query: 663 T-NTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+ QF GE V V S +V + +Q G +++ V +N++ +P
Sbjct: 633 VLQKAKRAKQFRIGEDVMVTSYHQPGRITDKVSNHE--WQIQMGILKMTVHENDLEKLPE 690
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV--QTSKN---SLDLRGMRVEEA 774
S+ + A P A + RV S+N +DLRG R E+A
Sbjct: 691 SQVEKIAKSKP--------------------AMHNTRVVKTASRNVSGHIDLRGERYEQA 730
Query: 775 SHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
LD I A + + +IHG GTG ++E V ++LR+ R+ YE
Sbjct: 731 MMDLDHYIDQAMLNNIDTIEIIHGKGTGALREGVTQMLRSDRRIKHYE 778
>gi|255099823|ref|ZP_05328800.1| putative DNA mismatch repair protein [Clostridium difficile
QCD-63q42]
gi|255305708|ref|ZP_05349880.1| putative DNA mismatch repair protein [Clostridium difficile ATCC
43255]
Length = 792
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 232/811 (28%), Positives = 394/811 (48%), Gaps = 94/811 (11%)
Query: 19 ESQKLLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E + +L +TS A +++ + + L I DI + A G L P + + TLR
Sbjct: 42 EVKSMLEETSEAQSIIIKRGSVGLEGIHDIEDKVKRAYIGASLDPGSLIMIADTLRVARR 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLE 136
+ L+ + E D + P+++ L N ++ ++E++I I ++ I D AS L
Sbjct: 102 LRNSLSSSDEEDFNY-----PIIQSLSNSLYVYKDIEDQIYNAIISEVEI-SDNASSTLR 155
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR + +++ S L + + + +I+ R R V +K+ ++ + GI
Sbjct: 156 DIRRRIAQKNQSIRSKLNSIISSTTYQKYLQDAIISLRGDRFVVPVKSEYRSQVA-GIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ SSSGAT F+EP VE NN +L E E ILS L+A + + ++ + +
Sbjct: 215 DQSSSGATLFIEPMTIVEMNNELRQLKLGEQEEIERILSELSAMVGEVSEDLISNQEILG 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D AF++ + M G+ P L+ D +NI+ +HPLL
Sbjct: 275 RLDFAFSKGKLSIQMRGIEPTLNE------DKYLNIKNGRHPLL---------------- 312
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
+ ++ ++ G DF +VITGPNTGGKT ++KT+GL +L
Sbjct: 313 ------DKKKVVANTIYLG-RDF------------HTLVITGPNTGGKTVTIKTVGLFAL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL++PA + +D + ADIGD QS+EQ+LSTFS H++ IV IL+ V+ +SLV+
Sbjct: 354 MTQSGLHIPADYGSSMCVYDNVFADIGDEQSIEQSLSTFSSHMTNIVSILQNVTADSLVI 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA ++L+ + + TTHY++L ENAA EF +E
Sbjct: 414 FDELGAGTDPVEGAALAIAVLEDINSVGAKCIATTHYSELKNYALTKPGVENAAVEFDIE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
TL PTY++L G G SNA I++ +G +I RA++ + E + E ++ Q++
Sbjct: 474 TLSPTYKLLIGVPGKSNAFEISRKLGLSDYVISRAKEYINTENIALE-------DVLQNV 526
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
+ R K A L EI L E +++ + L + + K + + AK +
Sbjct: 527 EKNRIKAVEDREEAERLKEEIEKLKVEYDEKLEKLVSQRDKMIEKAKSEAFSIIRQAKEE 586
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF----SVSETNTSSFTP 670
+D ++++ + ++ ++ E N I+E + + + + +P VS P
Sbjct: 587 VDIIIKELRSLEQERASKEKNRKIEELRKELTSSMGSLQPTVKSMIVPKVSNKEIKDLKP 646
Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
GE+V V +L +VV V +VQ G M++ + +++ RK+ +
Sbjct: 647 --GEEVKVITLNQN-GSVVSVDKKRKEAVVQIGIMKMTLPFKSLQK----TRKDVSTNVT 699
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACW 785
+ + +SGS KN +DLRG+ +EEA ++ D +A
Sbjct: 700 KSTRNIIRSKSGSV----------------KNEVDLRGLNLEEAIMEVEKYLDDAYVAGL 743
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
ES + VIHG+GTGV+K + +ILR + V
Sbjct: 744 ES---VTVIHGIGTGVLKAGLQDILRRNRHV 771
>gi|429506149|ref|YP_007187333.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|429487739|gb|AFZ91663.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
Length = 785
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 240/836 (28%), Positives = 406/836 (48%), Gaps = 107/836 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P+++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I++ +G II +A+ + +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521
Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
SL + +++ + + S+ E L++E++ + +L+ + + + Q+ ++L
Sbjct: 522 MIASLEKSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKMMEEAEQKAAEKLE 581
Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
A + + ++++ + + R E+ K A+ A ++ +P+
Sbjct: 582 AAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPER----KTEKKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K A ++E G+ + VQ G ++++VK+ ++ + ++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P P+ K A ++ + Y ++ LDLRG R E A ++ D
Sbjct: 688 -PEPKKEK---------AITAVKGKDYHVSLE-----LDLRGERYENALSRVEKYLDDAV 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L+NH V +++ + G T+ +K
Sbjct: 733 LAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK 785
>gi|269837731|ref|YP_003319959.1| MutS2 family protein [Sphaerobacter thermophilus DSM 20745]
gi|269786994|gb|ACZ39137.1| MutS2 family protein [Sphaerobacter thermophilus DSM 20745]
Length = 800
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 183/523 (34%), Positives = 273/523 (52%), Gaps = 61/523 (11%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK- 80
LL T A+ ++ + P + + DI ++ A G LLS ++ T++A + +
Sbjct: 46 LLAVTREAVTLLTTYPSFTVGGVRDIRPLVERARRGSLLSAGDLRDALDTIQAARELRRT 105
Query: 81 --KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
K+ +A EL Y L E ++ L LE +G + + I LD ASE L I
Sbjct: 106 FFKIPDANEL-------YPNLSEFVEAIADLAGLEADLGRTVGPRGEI-LDTASERLAEI 157
Query: 139 RAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R E +R ++ L+ +L A AG I ++T R R + ++A + +P G+
Sbjct: 158 RREVRIAHRRLLDRLNRMLTDAA----YAGAIQDAIVTMREGRYVIPVRADRRAQIP-GV 212
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
S+SG T F+EP VE NN L +E E AIL + +IA + ++ ++
Sbjct: 213 VHATSASGQTLFVEPMAVVELNNRWRELQMAEEHEIEAILRARSDQIAAAADDLDQTVEA 272
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS-----INIEGIKHPLLLGSSLRSLS 309
V IDLA A+A A M V PIL S I++ +HPLL
Sbjct: 273 VAAIDLALAKARLAFSMRAVEPILVEASGPGAPGGHPRHRIDLRQARHPLL--------- 323
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+P D VPID+++ R++V+TGPNTGGKT ++K
Sbjct: 324 ------DP--------------------DTVVPIDVRIGETYRILVVTGPNTGGKTVALK 357
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +LM++ GL++PA + L F + ADIGD QS+EQ+LSTFS H+++I+ +L
Sbjct: 358 TVGLLTLMAQTGLFIPAADGSALSVFSAVYADIGDEQSIEQSLSTFSAHVTKIIAMLRSA 417
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+SLVL+DEIG+GTDP EG ALA +I+ L +R +A+VTTHY++L ENA
Sbjct: 418 DADSLVLLDEIGAGTDPQEGSALARAIISALLERGVIAMVTTHYSELKAFAYVTEGTENA 477
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
+ EF L L PTYR+L G G SNAL IA+ +G R++I+ A+
Sbjct: 478 SVEFDLRNLSPTYRLLLGVAGQSNALAIAERLGMPREVIEAAR 520
>gi|218134832|ref|ZP_03463636.1| hypothetical protein BACPEC_02735 [[Bacteroides] pectinophilus ATCC
43243]
gi|217990217|gb|EEC56228.1| MutS2 family protein [[Bacteroides] pectinophilus ATCC 43243]
Length = 812
Score = 267 bits (683), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 232/766 (30%), Positives = 363/766 (47%), Gaps = 94/766 (12%)
Query: 89 DGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN 148
+ DSL +PL E L + +T L +I CI + I D AS++L+ IR + K +
Sbjct: 122 EADSL---TPLFESL---DPVTSLAAEIKRCILSEDEIS-DDASQNLKDIRRKIKAGQDK 174
Query: 149 ----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGAT 204
L SLL + + + + +IT R R C+ +KA +K +P G+ + S++G+T
Sbjct: 175 IHTELTSLLNSASVRTY----LQDYVITTRNGRYCLPVKAEYKSNVP-GMVHDQSATGST 229
Query: 205 YFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFAR 264
+F+EP V+ NN LS E AE IL+ +++ A+ I + ++ +D AFA+
Sbjct: 230 FFIEPMSVVKLNNDLKELSLKEEAEIEVILARISSHCAEYADAILTDQESLVRLDFAFAK 289
Query: 265 AGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVEN 324
A +++ P+++ + INI+ +HPL+ +
Sbjct: 290 ASLSRFYKCSRPVMNENGY------INIKKGRHPLIEPHHV------------------- 324
Query: 325 SEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYL 384
VPIDI + + +++ITGPNTGGKT S+KT+GL +LM ++GL +
Sbjct: 325 ----------------VPIDIWLGRDFDLLIITGPNTGGKTVSLKTVGLLTLMGQSGLNI 368
Query: 385 PAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGT 444
PA ++ L F + ADIGD QS+EQ+LSTFS H++ V IL R +L+L DEIG+GT
Sbjct: 369 PAFDNSELAVFKKVYADIGDEQSIEQSLSTFSSHMTNTVKILRYADRNTLILFDEIGAGT 428
Query: 445 DPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRI 504
DP+EG ALAT+IL L R + TTHY++L ENA EF +E+LRPTYR+
Sbjct: 429 DPTEGAALATAILANLHKRGIRTIATTHYSELKVYALSTPGVENACCEFDVESLRPTYRL 488
Query: 505 LWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQ 564
L G G SNA I+ +G II AQ R E Q + ++ L R LE +
Sbjct: 489 LIGVPGKSNAFAISSKLGLSDYIINDAQN-----RIETQDVKFEDVLTDLEGSRIALEEE 543
Query: 565 ARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID-------- 616
R A L E L +++ E + + + K + + + L AK D
Sbjct: 544 RREVAELKEEAARLKTQLQSERAKFNEQRDRILDKASTEAARILQEAKDYADETIRVMNK 603
Query: 617 --TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
VQ+ E R D++NS + I+A + P + V + S FT G
Sbjct: 604 HGMTVQELEKS-RTKVRDKMNS----TRERISAGRKKDEPAEPRKVHK--PSEFT--LGT 654
Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 734
+V V S+ + + TV P + VQ G +R +V +++ I NA + R +
Sbjct: 655 RVKVLSM-NLVGTVSTRPDARGNLFVQMGIIRSKVNISDLEIIEEDAFGNAISKGSRTGR 713
Query: 735 QQEDRQSGSAG-SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVL 791
+ GS + +S P + +L G V+EA +LD L A +
Sbjct: 714 KPAGGLGGSGSIKMGKSSSISPEI-------NLLGYTVDEAVAKLDKYLDDAYLSGIPQV 766
Query: 792 FVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
++HG GTG ++ V L+ V + ++ + G T+ K
Sbjct: 767 RIVHGKGTGALRNGVAAYLKGISYVKSFRLGEQGEGDAGVTIVEFK 812
>gi|402310174|ref|ZP_10829142.1| MutS2 family protein [Eubacterium sp. AS15]
gi|400369416|gb|EJP22416.1| MutS2 family protein [Eubacterium sp. AS15]
Length = 785
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 239/846 (28%), Positives = 389/846 (45%), Gaps = 139/846 (16%)
Query: 23 LLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL QTS A M+ ++ + +I D+ A G +L + V+ TLR
Sbjct: 46 LLEQTSEAQKMIVTKGAIPFGSIYDVRLKAKKASIGSILDAKSLIKVKETLRT------- 98
Query: 82 LTEAAELDGDSLQRYS--PLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
A + ++++ P++ + N +E++I I + I D AS +L I
Sbjct: 99 ----ARISKSYVEQFEDIPVISSISDNIRVSKSIEDEIERAIISETEI-SDDASTELRRI 153
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R + +++ + L ++ A + ++T R R + +K+ ++ P GI +
Sbjct: 154 RRQMANEKQSIKNKLNEIVTSAKYAKILQDTVVTVRNDRFVLPVKSENRDQFP-GIVHDT 212
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
SSSGAT F+EP V NN L E E IL+ LT+ + + EI Y + + E+
Sbjct: 213 SSSGATMFIEPMAIVNMNNHLSALKQEEYREIERILAYLTSIVGEFSEEIIYDCEMLEEL 272
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D A+ + MD + P ++ +V F ++ +HPL+
Sbjct: 273 DFIMAKGKLSVSMDAIEPKINQDKYVRFVNA------RHPLIE----------------- 309
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
K V +S + +G +VITGPNTGGKT ++KTLGL +M
Sbjct: 310 KDKVVSSTIEIGK------------------SYTTLVITGPNTGGKTVTLKTLGLLCIML 351
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+ GL++P F+ I ADIGD QS+ Q+LSTFS H++ IV I+ V SLVL D
Sbjct: 352 QCGLHIPCDIGSSGYIFNNIFADIGDEQSIAQSLSTFSAHMTNIVGIMNEVDENSLVLFD 411
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDP EG LA SIL L+++ L TTHY++L + NA+ EF + TL
Sbjct: 412 ELGAGTDPVEGAGLAISILDTLKEKDILTAATTHYSELKNYALTVDKVTNASVEFDVNTL 471
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE-------RQQHRKSE 549
PTYR++ G G SNA I++ +G + IIQRA+ + E ++ E + ++ E
Sbjct: 472 SPTYRLIIGIPGKSNAFEISQKLGLSKDIIQRARDTIHTESIKVEDVITKLDKIKNEYEE 531
Query: 550 LYQSLMEE-------RRKLESQARTAASLHAEIMD--------LYREIEDEAKDLDRRAA 594
Q L +E R KLE++ R A +I++ L E ++EA ++++
Sbjct: 532 KKQRLEKELEDAEFIRLKLENRERRAQQNSEKILEEAKNKARSLVEEAKNEADEINKVLN 591
Query: 595 HL-KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
L K+ + + + +++N K +I+T +D A + L+K +E +
Sbjct: 592 KLKKSSDYKNIDKKMNEIKGRINT--------FKDKYAKKKEELVKSNE----------K 633
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
P ++ V G+ V+V S A V+ V + V+VQ G +++ +KK N
Sbjct: 634 PIENVGV------------GDIVYVNSFAQN-AKVLSVDDKKNEVVVQLGAIKMTLKKEN 680
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
I L K+ D +S +G + Q + S+DLRGM +E
Sbjct: 681 I----------------SLEKKDNDTKSSKSGK-----IMKSKAQGATTSVDLRGMDLET 719
Query: 774 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGC 829
A ++D I + L +IHG+GT V+K+ V L+ H + Y Q G
Sbjct: 720 ALMEVDKYIDDSYLAGLEQLTIIHGVGTLVLKKGVQSYLKKHKHIKNYRDGQYGEGGMGV 779
Query: 830 TVAYIK 835
T+ +K
Sbjct: 780 TIVTLK 785
>gi|402300947|ref|ZP_10820382.1| recombination and DNA strand exchange inhibitor protein [Bacillus
alcalophilus ATCC 27647]
gi|401723934|gb|EJS97346.1| recombination and DNA strand exchange inhibitor protein [Bacillus
alcalophilus ATCC 27647]
Length = 785
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 223/790 (28%), Positives = 380/790 (48%), Gaps = 86/790 (10%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
I DI + A G LLS SE+ + T+ + K +T E + L + +
Sbjct: 67 IYDITPHVKRASIGGLLSASELMEIASTIYGGRQLKKFITNLVEE---EERELPLLYQHV 123
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
+ N LT++E +I CID + LD AS+ L IR + + ++ S L+++
Sbjct: 124 EQINPLTDVEREIKQCIDDNGHV-LDSASQTLRTIRQQVRSYESSVRSKLEQMTRSSSTQ 182
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ +IT R R + +K ++ GI + S+SG T F+EP+ V NN
Sbjct: 183 KMLSDAIITIRNDRFVIPVKQEYRGSF-GGIVHDQSASGQTLFIEPQVVVTLNNQLREAK 241
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
E E IL+ L+ ++A+ E+ + + +DL A+A +A + P ++ H
Sbjct: 242 VKETREIDRILAELSRQVAEVTDELLTNISTLAVLDLIIAKAHYANAIKATSPEINEAGH 301
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
V + +HPL+ + VPI
Sbjct: 302 VLLKKA------RHPLIDAGEV-----------------------------------VPI 320
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
DI++ E R ++ITGPNTGGKT ++KT+GL +LM ++GL++P + ++ + + ADIG
Sbjct: 321 DIELGGEFRSLIITGPNTGGKTVTLKTVGLLTLMMQSGLHVPVEEESKMAVYKQVFADIG 380
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQ+LSTFS H++ IV IL+ V +SLVL DE+G+GTDP+EG ALA +IL + R
Sbjct: 381 DEQSIEQSLSTFSSHMTNIVQILDKVDFQSLVLFDELGAGTDPTEGAALAIAILDDVYKR 440
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
V TTHY++L NA+ EF +++L+PTYR+L G G SNA I++ +G
Sbjct: 441 GAAVVATTHYSELKGYAYNREGVMNASVEFDVQSLKPTYRLLIGVPGRSNAFAISRRLGL 500
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 583
II RA+ + + ++ + SL E ++ +++ A ++ E L+R+++
Sbjct: 501 GEAIIDRAKDQI-----DSDSNKVENMIVSLEESKKSADAEQIEAKNIRFEAEKLHRDLQ 555
Query: 584 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 643
+ ++L R + + ++ + + AK + + ++++ + A + + +I +
Sbjct: 556 KQMEELQREKELILKQAEEEAEVAVAKAKEEAEFIIRELREMQKKGLAVKEHEIIDAKKH 615
Query: 644 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
A + + P G++V V S G K + + +V +D LVQ G
Sbjct: 616 LEEAAPKLTPKQKKIKKQAQQAKTLHP--GDEVKVLSFGQKGSIIEKV--NDKEYLVQIG 671
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
M+++V ++++ I +SK P +R E+ P
Sbjct: 672 IMKMKVALDDLQFIESSK-PVETKPLTTVR--------------GNESHVKP-------E 709
Query: 764 LDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 818
LDLRG R E A ++ D LA + S S +IHG GTG +++ V ++L+ HP V K
Sbjct: 710 LDLRGERYENAMLKVEKYIDDALLAGYHSVS---IIHGKGTGALRKGVKDLLKRHPHV-K 765
Query: 819 YEQESPMNYG 828
+++ MN G
Sbjct: 766 AARDAAMNEG 775
>gi|452856510|ref|YP_007498193.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452080770|emb|CCP22535.1| putative DNA mismatch repair enzyme [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 785
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 240/836 (28%), Positives = 406/836 (48%), Gaps = 107/836 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P+++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I++ +G II +A+ + +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521
Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
SL + +++ + + S+ E L++E++ + +L+ + + + Q+ ++L
Sbjct: 522 MIASLEKSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKMMEEAEQKAAEKLE 581
Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
A + + ++++ + + R E+ K A+ A ++ +P+
Sbjct: 582 AAAKEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPER----KTEKKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K A ++E G+ + VQ G ++++VK+ ++ + ++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P P+ K A ++ + Y ++ LDLRG R E A ++ D
Sbjct: 688 -PEPKKEK---------AITAVKGKDYHVSLE-----LDLRGERYENALSRVEKYLDDAV 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L+NH V +++ + G T+ +K
Sbjct: 733 LAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK 785
>gi|227485246|ref|ZP_03915562.1| recombination and DNA strand exchange inhibitor protein MutS2
[Anaerococcus lactolyticus ATCC 51172]
gi|227236706|gb|EEI86721.1| recombination and DNA strand exchange inhibitor protein MutS2
[Anaerococcus lactolyticus ATCC 51172]
Length = 781
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 231/818 (28%), Positives = 382/818 (46%), Gaps = 97/818 (11%)
Query: 24 LNQTSA-ALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L +T A A + ++ +D+ + D I+ +L PS++ + LR V + L
Sbjct: 47 LEKTGAMAKVIARNGNIDIFGLYDFKEIVGYIRRNGILEPSDLLKILGLLR----VSEYL 102
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL---IILDRASEDLELIR 139
+ ++ DS + L + + +FL E ID +L I D AS +L IR
Sbjct: 103 KDYSKNIDDSY--IADLFDRITTNDFLKE-------EIDRSILNEEDIADNASRELLAIR 153
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
+R E + + L + +++ R R V IK + + ++ +GI + S
Sbjct: 154 RSLRRKEEEIKNKLNSYVTSSKYEDALQDKVVSVRDGRYVVPIKTNKRSVI-NGIVHDKS 212
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
+SG T F+EP VE NN L E AE IL L+ K + EI + ID
Sbjct: 213 ASGNTLFIEPSAIVELNNQYKDLELKEDAEIRRILDRLSRLAQKFDVEILENQKIIARID 272
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
A+A F D P L+ Q ++ S+I HPLL G
Sbjct: 273 FLQAKAKFGLENDYSLPKLNQQKIINIKSAI------HPLLPGK---------------- 310
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VPID+ + + ++ITGPNTGGKT S+KT+GL +LM++
Sbjct: 311 --------------------VVPIDVAIGGDYTTLIITGPNTGGKTVSLKTVGLITLMAQ 350
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
L++PA + FD + DIGD QS+E +LSTFS ++ IVDIL V+ SLVL+DE
Sbjct: 351 TALFIPADEGSTVNVFDDVFLDIGDKQSIEMSLSTFSASLTNIVDILNRVTSNSLVLLDE 410
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
IGSGTDP EG ALA SIL +L ++ + TTHY++L ++ R NA+ EF++ TL
Sbjct: 411 IGSGTDPIEGAALAISILSHLTEKEVMTFATTHYSELKYYAMENNRVMNASVEFNVNTLS 470
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
PTY++ G+ G SNA I+K +G +I+++A+ L+ +++ + + +++
Sbjct: 471 PTYKLEIGTPGKSNAFEISKRLGLSEEILKKAKDLI-----SDDTKNFNKILEQIEDDKY 525
Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 619
++E++ + + EI + ++ +++K++D A + K ++ + L+ A + ++
Sbjct: 526 QMEAKNKEIEAYRREIQSIKDKLRNKSKEIDEAKAEIIKKAEERANEILDKANKESQAML 585
Query: 620 QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVK 679
++ + + D SL K + +E R +D F + + + G+ + V
Sbjct: 586 KEAKRSKNANTRDIDRSLNKIRNKFKDSYIE--REEDRFGQTRAKDAPDELKVGDMIIVA 643
Query: 680 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP--NSKRKNAANPAPRLRKQQE 737
L +K A V+E P + VQ G +++ N++ I N KN ++K
Sbjct: 644 GLNEK-AEVIEGPDSKGNIKVQMGILKMDSNIKNVKKIEGVNQTEKN-------IKKVYS 695
Query: 738 DRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIH 795
+++ + + SLDLRG R +EA LD L A +IH
Sbjct: 696 VKKAMNISA----------------SLDLRGQRYDEAMRNLDKYLDDAMLAGLDQAKIIH 739
Query: 796 GMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTV 831
G GTG + + V E L+ RV Y + YG T+
Sbjct: 740 GKGTGALIKGVSENLKTDKRVKSYRFGDDEEGGYGVTI 777
>gi|282850354|ref|ZP_06259733.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella parvula ATCC 17745]
gi|282579847|gb|EFB85251.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella parvula ATCC 17745]
Length = 812
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 203/701 (28%), Positives = 339/701 (48%), Gaps = 73/701 (10%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+LD AS L +R + E + + ++ + + +IT+R +R + +K +
Sbjct: 161 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 220
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 243
+ DG+ + S++G T ++EP V NN L + I EE +L + L+A + +
Sbjct: 221 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 276
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
++ ++V I+ + +A A GV ILS+ D ++++ +HPL+
Sbjct: 277 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVSLMRARHPLI--- 327
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
P ++ VP +I++ R+++ITG NTGG
Sbjct: 328 -------------P-------------------TNMVVPTNIQLGTSYRILLITGSNTGG 355
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KTLGL SLM++ GL++PA + LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 356 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 415
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L +V+THY +L
Sbjct: 416 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 475
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
EN EF TL+PTYR+ G G S+AL+IA +G + I++RA + + +
Sbjct: 476 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVERATE----YKSQFG 531
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
H E+ L E+ RK + R EI + ++E E K + + + AK
Sbjct: 532 SHEMEEVLSDLNEQLRKASERERALKKELDEIRRMRGQLEKEKKQFNEKRKQILAKAQAD 591
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ +V+ + +++ + Q + + D+ S I + I+++ P DD S T
Sbjct: 592 AESMKRSLRVEGEAIIKQLKAQFSETNKDKRQSAINAARKRISSVHVPEAPVDDDRKSLT 651
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 721
+ + G+ V+V SL L TV+ + G+ V + V+V ++ R N
Sbjct: 652 ADA---IKVGQAVYVTSL-RSLGTVLSINGNRVNVDINGLTATVKVSELQSTTREEGNKL 707
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 779
+ P+ RK R GSA +E + +++ G V+EA+ +
Sbjct: 708 AREQKEAMPKTRK----RMGGSAVQRQKEV---------RTEINILGQTVDEATVSVGRF 754
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
I A + + +IHG GTGV++E V + LR P VA +E
Sbjct: 755 IDQALLGGVNQVRIIHGKGTGVLREGVHQYLRTLPHVAHFE 795
>gi|384266410|ref|YP_005422117.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899448|ref|YP_006329744.1| DNA mismatch repair protein [Bacillus amyloliquefaciens Y2]
gi|380499763|emb|CCG50801.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387173558|gb|AFJ63019.1| DNA mismatch repair protein [Bacillus amyloliquefaciens Y2]
Length = 785
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 240/836 (28%), Positives = 405/836 (48%), Gaps = 107/836 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P+++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I++ +G II +A+ + +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521
Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
SL +++ + + S+ E L++E++ + +L+ + + + Q+ ++L
Sbjct: 522 MIASLENSKKRADEELSETESIRKEAEKLHKELQQQIIELNAQKDKMMEEAEQKAAEKLE 581
Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
A + + ++++ + + R E+ K A+ A ++ +P+
Sbjct: 582 AAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPER----KTEKKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K A ++E G+ + VQ G ++++VK+ ++ + ++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P P+ K A ++ + Y ++ LDLRG R E A ++ D
Sbjct: 688 -PEPKKEK---------AITAVKGKDYHVSLE-----LDLRGERYENALSRVEKYLDDAV 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L+NH V +++ + G T+ +K
Sbjct: 733 LAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK 785
>gi|423650449|ref|ZP_17626019.1| MutS2 protein [Bacillus cereus VD169]
gi|401281608|gb|EJR87514.1| MutS2 protein [Bacillus cereus VD169]
Length = 786
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 241/841 (28%), Positives = 400/841 (47%), Gaps = 115/841 (13%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
K + E Q ++ + + + S PL I DI + A G +LSP+E+ + T+
Sbjct: 41 KEIVEMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
N+ + + + A+ +G L P+LE + L +LE+KI CI ++ D AS+
Sbjct: 99 SRNMKRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASD 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R E L+++ + AQ + ++T R R + +K ++ +
Sbjct: 153 KLRGIRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGV 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S+SG T F+EP+ VE NN E E IL +LT E+A +
Sbjct: 209 Y-GGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVL 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
++ V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 268 SNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
+P + VP +I + + +VITGPNTGGKT ++K
Sbjct: 313 ------DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+G+ LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE
Sbjct: 347 TVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKA 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA
Sbjct: 407 DFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF + TL PTY++L G G SNA I+K +G ++I++A+ + ++
Sbjct: 467 SVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIEN 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQE 607
+ L E ++ E A +L + L+RE++ + + DR LKA+ ++ +++
Sbjct: 522 MIAKLEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEK 579
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSE 662
+ AK + + ++Q+ QLR A + + LI+ E A +V+ +
Sbjct: 580 VEAAKKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK--------- 629
Query: 663 TNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
N + P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 630 VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYIN 687
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
KQ E + + + S LDLRG R E A ++
Sbjct: 688 TP-------------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARV 725
Query: 779 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYI 834
+ L A S + +IHG GTG +++ V + L+ H V +Y G TV +
Sbjct: 726 EKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVEL 785
Query: 835 K 835
K
Sbjct: 786 K 786
>gi|366053748|ref|ZP_09451470.1| MutS2 family protein [Lactobacillus suebicus KCTC 3549]
Length = 790
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 248/851 (29%), Positives = 412/851 (48%), Gaps = 135/851 (15%)
Query: 18 EESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA-- 74
E +LL +T+A++ +++ + + + + DI+ L L+ +E+ + R LRA
Sbjct: 41 ETVNELLGETTASVEILRLNGGMPIPQLSDISEQLKRLKIKATLNGTELAQIARVLRASA 100
Query: 75 -VNNVWKKLTEAAELDGDSLQRY-SPLLELLKNCNFLTELEEKIGFCID---CKLLIILD 129
+ ++KL + E+D +++ Y L+ + L E G D KL + +
Sbjct: 101 STKDFFEKLRQQ-EIDIKAVEHYVDELVTIPSITKQLVSSVEDDGRLKDEASTKLHGLRE 159
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
+ ++ LIR + MEN + ++ + ++T R R + ++A+++
Sbjct: 160 KITQTEALIR----QRMENY--------TRGKESKYLSDSIVTMRNDRYVLPVQANYRNH 207
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI---AEETAILSLLTAEIAKSER 246
G+ + S SG T F+EP+ +E NN RL ++I EE IL+ L++ +A
Sbjct: 208 F-GGVVHDQSQSGLTLFIEPQAVMELNN---RLREAQIDERHEERRILAELSSTLAPYRI 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
EI + + +D A+A A M+ PI+S Q+HV N++ +HPL+
Sbjct: 264 EIAHNETILGHLDFLNAKAAIAHEMNATKPIVSEQNHV------NLKRARHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P K V DI++ + ++ITGPNTGGKT
Sbjct: 312 ---------DPKKM--------------------VANDIEIGDAYKAIIITGPNTGGKTI 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL LM ++GLY+P + + F I ADIGD QSLEQNLSTFSGH+ + IL
Sbjct: 343 TLKTIGLIQLMGQSGLYIPTEEESSIGVFGDIFADIGDEQSLEQNLSTFSGHMENVKSIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK-DKDTR 485
+ + SLVL+DE+G+GTDP EG ALA SIL + + +VTTHY +L D+D
Sbjct: 403 DHIDSRSLVLLDELGAGTDPKEGAALAMSILDAIGVKNSYVMVTTHYPELKVYGYDRDQT 462
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
NA+ EF ETL+PTYR+L G G SNA IA+ +G +II A+ L + + Q
Sbjct: 463 I-NASMEFDQETLQPTYRLLLGIPGRSNAFEIAQRLGISSEIISEARSLTD---DDSQDL 518
Query: 546 RKSELYQSLMEERRK-------LESQARTAASLHAEI---MDLYREIEDEAKDLDR-RAA 594
K + L+E+R+K LE Q A L E+ +D + D+ +D R +A
Sbjct: 519 NK--MIGDLVEQRKKAHEHELELEHQVADATDLQTELRQKLDQFEANRDQMQDQARVQAN 576
Query: 595 HLKAKETQQVQQEL-NFAKVQIDTVVQDFENQLRDASADEINSL-IKESESAIAAIVEAH 652
H A+ Q+ Q + + +++ ENQL DA ++N+L + + + +++
Sbjct: 577 HEVAQARQKADQIISHLRQLERQQGANVKENQLIDAKG-QLNALHMNDPKLKKNKVLQRE 635
Query: 653 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ D V G+ V VKS G + + G DD VQ G ++++V ++
Sbjct: 636 KRKHDLKV------------GDAVLVKSYG-QYGELTRKMGKDDWE-VQLGILKMKVNES 681
Query: 713 NIRPIPNSKRKN-----AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 767
++ + RKN A P + + Q+ RQ+ + LDLR
Sbjct: 682 DLE---RTDRKNISEQEAKQPKRPMVRTQQTRQTSA-------------------RLDLR 719
Query: 768 GMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 825
G R E A ++++ I A + + +IHG GTG +++ E L+++PRV +E +P
Sbjct: 720 GHRYEAAMNEVEQFIDHAILNNLPSVTIIHGKGTGALRKGTHEYLQSNPRVKSFEYAAPN 779
Query: 826 --NYGCTVAYI 834
G T+ ++
Sbjct: 780 AGGDGATIVFL 790
>gi|326803291|ref|YP_004321109.1| recombination and DNA strand exchange inhibitor protein [Aerococcus
urinae ACS-120-V-Col10a]
gi|326651631|gb|AEA01814.1| recombination and DNA strand exchange inhibitor protein [Aerococcus
urinae ACS-120-V-Col10a]
Length = 795
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 248/830 (29%), Positives = 390/830 (46%), Gaps = 136/830 (16%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L L + D+ ++ G +L+ E+ V R L++V+ V E +LD D Q
Sbjct: 63 LPLGQLVDVGPLMKRLDIGGILNGQELAHVGRVLKSVSEVSHFFKEIEDLDIDVEQMQGY 122
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLK 154
+ + + + ++ + I D + D AS L IR AE +LD+++K
Sbjct: 123 VSDFANHKDLAKKINQAI--ASDGS---VYDEASSHLHSIRQSIKAEEAHIRMSLDNIIK 177
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
QA + ++T R R + +K ++ G+ + S+SG T ++EP+ +E
Sbjct: 178 SS-----QADYLSDQIVTIRNDRYVLPVKQEYRRKFG-GVVHDQSASGQTLYIEPQVVME 231
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
NN L E AE I + L+A++A +EI + ++D A+ +A+
Sbjct: 232 SNNKVHSLRIEEQAEIERIFAELSADLAPHSQEINQNNQILGQLDFIQAKWRYAKKQGAH 291
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P+++ Q H S+N+E HPLL NP K+ V N+
Sbjct: 292 RPLIA-QDH----QSLNLEEAVHPLL---------------NP-KTAVANT--------- 321
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
I + + R+++ITGPNTGGKT ++KT GL LM ++GLY+ AK R+
Sbjct: 322 ----------ISFDGDYRMLIITGPNTGGKTITLKTTGLLQLMGQSGLYITAKADSRIGV 371
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
FD I ADIGD QS+E NLSTFSGH++ I+ ILE + +SLVLIDE+GSGTDP EG ALA
Sbjct: 372 FDHIFADIGDEQSIEANLSTFSGHMTNIISILEAIDDQSLVLIDELGSGTDPKEGAALAM 431
Query: 455 SILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
+IL L +VG V+ TTHY +L ++ NA+ EF +TL PTYR+L G G SN
Sbjct: 432 AILNRLA-QVGCTVLATTHYPELKAYAFEEPNAINASVEFDEKTLTPTYRLLIGQPGRSN 490
Query: 514 ALNIAKSIGFDRKIIQRAQ-----------KLVERLRPERQQHRKSE--LYQSLMEERRK 560
A +I++ +G D+ I+ A+ ++++ L +RQ + + L Q L E +
Sbjct: 491 AFDISQRLGLDQSIVDEARYYVGEESQSLNEMIDDLDEKRQAYERDNQALSQDLQEADKL 550
Query: 561 LESQARTAASLHAEIMDLYREIEDEAKDL-------------DRRAAHLKAKETQQVQQ- 606
L + +L + + + EA DL D R + Q V++
Sbjct: 551 LADLKKAYHALENDKITYLNRAKREANDLVAKTQEKADKLLGDIREWQKNNPQGQTVKEH 610
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
E+ + QI + Q+ E QLR N ++K + + + D V
Sbjct: 611 EMIDKQKQIANLTQE-EQQLRK------NKVLKR---------QKRKKNKDLEV------ 648
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
G++V V ++ T+VE +D LVQ G +++ + + ++
Sbjct: 649 ------GDEVKVIPYS-QMGTLVE-KREDKHWLVQMGMLKMEIPEKDL------------ 688
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALAC 784
+ QE Q S G + + + K+ LDLRGMR EEA LD I A
Sbjct: 689 -------ELQEKSQPKSKGKKGSSSVRASQSKNIKSELDLRGMRYEEAMTALDRYIDQAL 741
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
+ + +IHG GTGV+++ V + LRN+ RV + +P N G A I
Sbjct: 742 LANYPQVTIIHGFGTGVIRDGVQKYLRNNKRVKSFSY-APHNLGGQGATI 790
>gi|336234407|ref|YP_004587023.1| MutS2 protein [Geobacillus thermoglucosidasius C56-YS93]
gi|335361262|gb|AEH46942.1| MutS2 protein [Geobacillus thermoglucosidasius C56-YS93]
Length = 784
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 240/817 (29%), Positives = 381/817 (46%), Gaps = 115/817 (14%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ +AAL + PL I DI L G LSP E+ + T+ A +
Sbjct: 47 QEETDEAAAALRLRGHVPL--GGIVDIRASLKRVKIGGTLSPHELLDISSTISAS----R 100
Query: 81 KLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+L + E + + + L + L E+++ I CID + LD ASE L IR
Sbjct: 101 QLKQFIESLHEEKEEFPHLAGYAEKLVALPEVQQAIERCIDDHGEV-LDHASERLRSIRQ 159
Query: 141 ERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
+ + R E L+S+++ +AQ + +IT R R + +K ++ GI
Sbjct: 160 QLRTTEARVREKLESIIRSPSAQKM----LSDAIITIRNDRYVIPVKQEYRGAY-GGIVH 214
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT F+EP+ VE NN E E IL+ LT +A + + +
Sbjct: 215 DQSASGATLFIEPQAVVELNNQLQEARVKEKREIERILTELTGIVAGHAEALLENVGILA 274
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
++D FA+A +A + P L+ + ++ + +HPL+ ++
Sbjct: 275 QLDFIFAKAKYANKLKATKPALNDRGYIRLLQA------RHPLIDQEAV----------- 317
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP DI++ E +VITGPNTGGKT ++KT+GL +L
Sbjct: 318 ------------------------VPNDIELGKEYTTIVITGPNTGGKTVTLKTIGLLTL 353
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA + L F I ADIGD QS+EQ+LSTFS H+ IV+IL V ESLVL
Sbjct: 354 MAQAGLFIPALDGSELAVFRSIYADIGDEQSIEQSLSTFSSHMVNIVEILRDVDHESLVL 413
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
DE+G+GTDP EG ALA +IL + R V TTHY +L NA+ EF E
Sbjct: 414 FDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRDGVINASVEFDTE 473
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME 556
TLRPTY++L G G SNA I+K +G +II+RA +L + + + SL +
Sbjct: 474 TLRPTYKLLIGIPGRSNAFEISKRLGLAERIIERA-----KLHISAESNNVENMIASLEQ 528
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQID 616
+++ E + + A E L R+ E + ++L + + + ++ + ++ + +
Sbjct: 529 SKKRAEEELKKAEEARMEAEQLRRDWEQKWEELHEKREEIIEEAKRKAADIVRSSQQKAE 588
Query: 617 TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD---------FSVSETNTSS 667
++ + ++ A+ IKE E ++EA + + + T S
Sbjct: 589 RIIHELRRMQQEKQAE-----IKEHE-----LIEAKKRLQEAMPTLEKKKKERKKQATHS 638
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
F P G++V V SL K V +V DD VQ G +++++ + ++ I S K
Sbjct: 639 FQP--GDEVKVISLNQKGYLVEKV--SDDEWQVQLGILKMKINERDLEYI-GSAPKTETK 693
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIAL 782
P ++ + D G LDLRG R E+A +L D L
Sbjct: 694 PLATVKGK--DYHVGL-------------------ELDLRGERYEDALARLEKYIDDALL 732
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + S+ IHG GTG +++ V E L+ H V +
Sbjct: 733 AGYPRVSI---IHGKGTGALRKGVQEFLKTHRAVKSF 766
>gi|205374420|ref|ZP_03227217.1| recombination and DNA strand exchange inhibitor protein [Bacillus
coahuilensis m4-4]
Length = 766
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 247/839 (29%), Positives = 393/839 (46%), Gaps = 112/839 (13%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SLE+ L +T A +++ + L I +I L A G +L+ SE+ V T+ A
Sbjct: 21 SLEDVITLQEETDEAATVLRLKGHAPLGGIFNIRPQLKRAEIGGMLNASELVEVASTIYA 80
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
+ + + E +G L P+ L+ LT LE +I ID I LD AS
Sbjct: 81 -SRMIRAFEEQLSEEGVDL----PIFHGLISEMPILTGLEHEIKQSIDDNGEI-LDGASP 134
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR++R+ R E L+S+++ AQ + I +T R R + +K ++
Sbjct: 135 ALRSIRSQRRLTEGRVREKLESMVRSRNAQKMLSDAI----VTIRNDRYVLPVKQEYRGH 190
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSG T F+EP+ V+ NN L E E IL L+ +++ ++
Sbjct: 191 Y-GGIVHDQSSSGQTLFIEPESVVQLNNSLRELRVKEQTEIEKILLELSGRVSEVTEDLS 249
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+++ + ID F +A + + + G P ++ + + + +HPLL
Sbjct: 250 VIINHLAHIDFMFTKAKYGRSIKGTKPSMNDKGRIKLFKA------RHPLL--------- 294
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
GI + V DI + + +VITGPNTGGKT ++K
Sbjct: 295 -------------------------GIEE-AVANDIFLGEDFTTIVITGPNTGGKTVTLK 328
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+G+ +L+++AGL +PA + L F + ADIGD QS+EQ+LSTFS H+ IVDIL+ V
Sbjct: 329 TIGICTLLAQAGLPIPALDGSELAVFQSVYADIGDEQSIEQSLSTFSSHMVNIVDILDKV 388
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+SLVL DE+G+GTDP EG ALA SIL Y+ R V TTHY +L NA
Sbjct: 389 DFQSLVLFDELGAGTDPQEGAALAISILDYVYKRGARVVATTHYPELKAYGYNREGVVNA 448
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF +ETLRPTYR+L G G SNA I+K +G +I A R+ +
Sbjct: 449 SVEFDVETLRPTYRLLLGVPGRSNAFEISKRLGLSDDVIDYA-----RVHIGTDSKQVEN 503
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL E +R E + A L L+R+++ + + + L K + + +
Sbjct: 504 MIASLEESKRMAEKERMEANELLKSADKLHRDLQKQTVEYYEKKDELVDKAKDKAIKIVE 563
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS---------V 660
AK + + ++++ N LR N+ +KE E ++EA + +D +
Sbjct: 564 EAKREAEEIIRELRN-LRIQK----NAEVKEHE-----LIEAKKRLEDATPTKNMKKTQA 613
Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
S T++ P G+ V V S G K ++E G+ + VQ G ++++V+ +I +
Sbjct: 614 SRTDSKELRP--GDDVKVLSFGQK-GVLLEKTGEAEWA-VQMGILKMKVETKDIEFVSRK 669
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD- 779
K K P ++ + Y ++ LDLRG R + A ++++
Sbjct: 670 KEK-VTKPLATVKGK----------------DYHVSLE-----LDLRGERYDHALNRVEK 707
Query: 780 -IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
I A S + +IHG GTG +++ V E L+NH V ++ + G TV K
Sbjct: 708 YIDDALLASYPRVSIIHGKGTGALRKGVQEYLKNHRSVKSIRFGEAGEGGTGVTVVEFK 766
>gi|154686993|ref|YP_001422154.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens FZB42]
gi|189030421|sp|A7Z7E7.1|MUTS2_BACA2 RecName: Full=MutS2 protein
gi|154352844|gb|ABS74923.1| MutSB [Bacillus amyloliquefaciens FZB42]
Length = 785
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 237/833 (28%), Positives = 405/833 (48%), Gaps = 101/833 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LSDIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P+++ D I ++ +HPLL
Sbjct: 269 DVEVLQTLDFIFAKARYAKAMKATKPLMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I++ +G II +A+ + +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521
Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
SL + +++ + + S+ E L+++++ + +L+ + + + Q+ ++L
Sbjct: 522 MIASLEKSKKRADEELSETESIRKEAEKLHKDLQQQIIELNAQKDKMMEEAEQKAAEKLE 581
Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
A + + ++++ + + R E+ K A+ A ++ +P+
Sbjct: 582 AAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPER----KTEKKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K A ++E G+ + VQ G ++++VK+ ++ + ++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
P P+ K A ++ + Y ++ LDLRG R E A +++ L A
Sbjct: 688 -PEPKKEK---------AITAVKGKDYHVSLE-----LDLRGERYENALSRVEKYLDDAV 732
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
+ +IHG GTG +++ V ++L+NH V +++ + G T+ +K
Sbjct: 733 LAGHPRVSIIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK 785
>gi|260587418|ref|ZP_05853331.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
gi|260542285|gb|EEX22854.1| DNA mismatch repair protein MutS [Blautia hansenii DSM 20583]
Length = 792
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 241/825 (29%), Positives = 399/825 (48%), Gaps = 111/825 (13%)
Query: 16 SLEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+L E + + +T+ ALA + Q L ++DI G L G L E+ ++ L
Sbjct: 39 NLNEIEIMQQETADALARIYQKGSLSFGGVKDIRGSLKRLEIGSTLGTGELLSLCSLLEN 98
Query: 75 VN--NVWKKLTEAAE----LDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
N + + A E LDG + LQ +PL ++ C L+E E
Sbjct: 99 TNRAKAYARRENAEEKQDSLDGMFEILQPLTPLALEIRRC-ILSEEE------------- 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQI--FQAGG----IDKPLITKRRSRMCV 180
I D AS L+ IR R+M+N + K+ +Q+ + +G + ++T R R C+
Sbjct: 145 IADDASAGLKQIR----RSMKNTND---KIHSQLSSYVSGSARTYLQDAVVTMRNGRYCI 197
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
+KA HK +P G+ + SS+G+T F+EP V+ NN L E AE ILS L+
Sbjct: 198 PVKAEHKGHVP-GMIHDQSSTGSTVFVEPMAIVKLNNDLRELEVKEQAEIEIILSNLSQY 256
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
A++ I+ + + ++D FARA A+ + P +++ I+++ +HPL+
Sbjct: 257 AAENLEAIEDNLKVMTQLDFIFARALLAKAQNATEPRFNTKG------IIDLKKARHPLI 310
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+ VPID+++ + ++V+TGPN
Sbjct: 311 DKHKV-----------------------------------VPIDVRLGEDFDLLVVTGPN 335
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT S+KT+GL +LM ++GL++PA ++ RL F + ADIGD QS+EQ+LSTFS H++
Sbjct: 336 TGGKTVSLKTIGLLTLMGQSGLHIPAFDNSRLSIFKEVYADIGDEQSIEQSLSTFSSHMT 395
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
+V +E R+SLVL DE+G+GTDP+EG ALA +IL +L + + TTHY++L
Sbjct: 396 NVVRFIEKADRDSLVLFDELGAGTDPTEGAALAIAILSHLHAQGIRTMATTHYSELKVYA 455
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
ENA+ EF +ETLRPTYR+L G G SNA I+ +G II +A+ E++
Sbjct: 456 LSTHGVENASCEFDVETLRPTYRLLIGIPGKSNAFAISGKLGLPSYIIDKAK---EQISQ 512
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
E + ++ +L + R+ +E++ A EI L +++E++ L++R +
Sbjct: 513 EDESFE--DVLSTLEQSRKTIEAEEAEIARYKTEIESLKKQLEEKQDKLEQRKERILRDA 570
Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFS 659
++ + L AK D ++ F +++ SA E +++ S + ++
Sbjct: 571 NEEAHRILREAKEYADQTMKIFNKAGKESMSAKE----LEQKRSELRKKMDQTGKKMALK 626
Query: 660 VSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
E S+ T + G+ V V SL K T+ P V VQ G +R +V ++++
Sbjct: 627 TPEKKKSTLTAKDISLGDAVKVLSLNVK-GTISSKPDAKGMVFVQMGILRSKVHLSDLQL 685
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
I AP L++ G+ S ++T ++L G V+EA
Sbjct: 686 ID-----EPVITAPSLQR---------TGAGKIRMSKSASIRT---EINLLGKTVDEAIA 728
Query: 777 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+LD L A + + V+HG GTG +++ V L+ V +
Sbjct: 729 ELDKYLDDAYLAHLNSVRVVHGKGTGALRKGVHNYLKRLKYVKDF 773
>gi|228941731|ref|ZP_04104278.1| hypothetical protein bthur0008_43670 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228974655|ref|ZP_04135221.1| hypothetical protein bthur0003_44080 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228981249|ref|ZP_04141549.1| hypothetical protein bthur0002_44100 [Bacillus thuringiensis Bt407]
gi|384188627|ref|YP_005574523.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676948|ref|YP_006929319.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
gi|423386045|ref|ZP_17363301.1| MutS2 protein [Bacillus cereus BAG1X1-2]
gi|423527598|ref|ZP_17504043.1| MutS2 protein [Bacillus cereus HuB1-1]
gi|452201022|ref|YP_007481103.1| Recombination inhibitory protein MutS2 [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
gi|228778449|gb|EEM26716.1| hypothetical protein bthur0002_44100 [Bacillus thuringiensis Bt407]
gi|228785058|gb|EEM33071.1| hypothetical protein bthur0003_44080 [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228817943|gb|EEM64021.1| hypothetical protein bthur0008_43670 [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326942336|gb|AEA18232.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401634696|gb|EJS52459.1| MutS2 protein [Bacillus cereus BAG1X1-2]
gi|402452967|gb|EJV84777.1| MutS2 protein [Bacillus cereus HuB1-1]
gi|409176077|gb|AFV20382.1| MutS2 protein MutS [Bacillus thuringiensis Bt407]
gi|452106415|gb|AGG03355.1| Recombination inhibitory protein MutS2 [Bacillus thuringiensis
serovar thuringiensis str. IS5056]
Length = 786
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 235/813 (28%), Positives = 389/813 (47%), Gaps = 101/813 (12%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L ELE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYELEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ- 671
+ + ++Q+ QLR A +N +K+ E A + +E P + + N + P+
Sbjct: 586 EAEGIIQEL-RQLRKAQL--VN--VKDHELIEAKSRLEGTAP-ELVKKQKVNVKNTAPKQ 639
Query: 672 ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 640 QLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------- 689
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
KQ E + S + S LDLRG R E+A +++ L A
Sbjct: 690 -----KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLA 735
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
S + +IHG GTG +++ V + L+ H V Y
Sbjct: 736 SYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|419858984|ref|ZP_14381641.1| MutS family ATPase [Oenococcus oeni DSM 20252 = AWRIB129]
gi|410497345|gb|EKP88819.1| MutS family ATPase [Oenococcus oeni DSM 20252 = AWRIB129]
Length = 795
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 226/824 (27%), Positives = 405/824 (49%), Gaps = 101/824 (12%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL+QTS AL + + + L + D+ I +L SE+ ++ +L++ +
Sbjct: 46 LLDQTSDALLIDRRRGGLPIRKTNDLTEIFKRLKLKAVLGTSELADLKSSLQSGQEISDF 105
Query: 82 L-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ T E+ ++L++ +L ++ + L +++ +D + +LD ASE+L IR
Sbjct: 106 IATIKDEIWSENLRQ---ILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRK 161
Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
N+ +LL K+ A + +P+I+ R + + +K+ ++ G+ + S
Sbjct: 162 NISTTQNNVRTLLVKMTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQ 219
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
SG T ++EP+ V+ NN L ++I E +IL ++ ++ ++K D + E+DL
Sbjct: 220 SGLTLYIEPQATVDLNNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDL 279
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A+A A M+ + P H++ + I+++ +HPLL S
Sbjct: 280 IQAKAKLANSMNAIKP------HLNDEKVIDLKNARHPLLASDS---------------- 317
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
V DI++ + ++ITGPNTGGKT +KTLGL LM++
Sbjct: 318 --------------------VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQT 357
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
G+++ A + + F+ I ADIGD QSLEQ+LSTFS H+ I +IL+ R SLVL+DE+
Sbjct: 358 GIFITAGSDSSIYVFNNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDEL 417
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP EG ALA +I++ L R L ++TTHY +L D+ NA+ EF T P
Sbjct: 418 GAGTDPGEGAALAMAIVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSP 477
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
TYR+L G G SNA+ I++ +GF+ I++ A+ V+ P+ Q+ + L + L+ +RR
Sbjct: 478 TYRLLLGVPGQSNAIAISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRD 532
Query: 561 L---ESQARTAAS--------LHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQVQQ 606
L ES+ R S L+ ++ + + E D +A H+ + +E++Q+
Sbjct: 533 LSKEESELRNQLSRAEQERKQLNQQLNEFEQNKAKEIMDAKNKANHIVSSVRQESKQLLD 592
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
++ +++ + E QL+ AD+I+ L +++ +++ + F V
Sbjct: 593 QIRRERLKAGSSTGKNEQQLKKI-ADQIDDLHQDTSLEKNRVLKRAKSAKQFRV------ 645
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
GE+V V S T+++ + + VQ G +++ V +N++ + + K
Sbjct: 646 ------GEEVMVSSYHQS-GTIIDKISNHEWQ-VQLGILKMNVDENDLEKLSTDQEKKIN 697
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALAC 784
P R++ + + + S + +DLRG R E+A LD I A
Sbjct: 698 EPVHRVKNTRVFKTASKNISGH---------------IDLRGERYEQAMIDLDRYIDQAM 742
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+ + +IHG GTG +++ V ++LR+ R+ Y+ +P G
Sbjct: 743 LNNIDTIEIIHGKGTGALRKGVTQMLRSDRRIKHYQFANPNGAG 786
>gi|297583686|ref|YP_003699466.1| MutS2 family protein [Bacillus selenitireducens MLS10]
gi|297142143|gb|ADH98900.1| MutS2 family protein [Bacillus selenitireducens MLS10]
Length = 786
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 244/819 (29%), Positives = 383/819 (46%), Gaps = 121/819 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L ++DI + A G L+ E+ + T+ A + ++ E L D ++ L
Sbjct: 65 LGGLKDIKASIKRAEIGAQLNEGELLDIASTIYA-SRRFRSFIEG--LVEDEIE-LVILP 120
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
E+ ++ LT+LE +I ID + LD AS L IR + R++E+ S+ K+
Sbjct: 121 EMTRSMTPLTDLEHEIKQAIDENGHV-LDSASPALRQIR-QSIRSLES--SVRSKLENTT 176
Query: 161 FQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ G + ++T R R + +KA ++ GI + S+SG T F+EP+ AV NN
Sbjct: 177 RSSSGRKMLSDAIVTIRNDRYVIPVKAEYRNHF-GGIVHDQSASGQTLFVEPEFAVTTNN 235
Query: 218 MEVRLSNSEIAEETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
+L ++ EET I L L+ +++ E+ ++D + E+D FA+A + +
Sbjct: 236 ---QLREAKAKEETEIQRILFELSGSVSEVTGELAVILDVMTEVDFMFAKAYYGASIKAT 292
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
P L + D S ++ +HPL+ P
Sbjct: 293 EPKLDT------DGSFDLRKARHPLI----------------P----------------- 313
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
D VPID+ + +VITGPNTGGKT ++KT+G+ +LM+++GL +P +
Sbjct: 314 --EDEIVPIDVSLGDAYSSLVITGPNTGGKTVTLKTVGMLTLMAQSGLQIPVQEGSTAGI 371
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
+ I ADIGD QS+EQ+LSTFS H++ IV+I++ V ESLVL DE+G+GTDP+EG ALA
Sbjct: 372 YQKIFADIGDEQSIEQSLSTFSSHMTNIVNIMDNVDHESLVLFDELGAGTDPTEGAALAI 431
Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
+IL +R + TTHY++L NA+ EF +ETLRPTYR+L G G SNA
Sbjct: 432 AILDRVRSIGAKVIATTHYSELKGYAYNREGVINASVEFDVETLRPTYRLLIGIPGRSNA 491
Query: 515 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RT 567
I+K +G II+ A L ++ ++ SL + R+ E +
Sbjct: 492 FAISKRLGLGDDIIEEAG-----LHVTADSNKMEKMISSLEDSRKAAEKDYDEADALLQE 546
Query: 568 AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR 627
A +LHAE+ + IE E + + RA K ++ +E F ++ +Q ++
Sbjct: 547 AEALHAELAEELERIEVEKERIFERAEEKANKAVEKAMEEAEFIIAELRE-MQANAPSIK 605
Query: 628 DASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 687
D + +++SE + + V + P G++V V SL K
Sbjct: 606 DHKLIDAKKRLEDSEVTLKKKKKTSPVKKKKPV-----DTLLP--GDEVKVVSLNQK-GH 657
Query: 688 VVEVPGDDDTVLVQYGKMRVRVKKNNI----RPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
+VE G D +VQ G M+++VKK+++ RP P + P LR
Sbjct: 658 IVEASGKTD-YMVQLGMMKMKVKKDDLLYIDRPKPVETK-----PLATLRG--------- 702
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMG 798
R K LDLRG R E A + D LA + S +IHG G
Sbjct: 703 ------------RDAHVKPELDLRGERYESAMMDVEKYLDDAVLAGYHQVS---IIHGKG 747
Query: 799 TGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
TG +++ V E+L HP V + + G TVA +K
Sbjct: 748 TGALRKGVQELLERHPNVKSTRLGSQGEGGSGVTVAQLK 786
>gi|451345992|ref|YP_007444623.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens IT-45]
gi|449849750|gb|AGF26742.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens IT-45]
Length = 785
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 240/836 (28%), Positives = 400/836 (47%), Gaps = 107/836 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LADIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P ++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I++ +G II +A+ + +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521
Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL---KAKETQQVQQ 606
SL + +++ + + SL E L++E++ + +L+ + + ++ + +
Sbjct: 522 MIASLEKSKKRADEELSETESLRKEAEKLHKELQQQIIELNAQKDKMMEEAERKAAEKLE 581
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
QI ++ + + R E+ K A+ A ++ +P+
Sbjct: 582 AAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPER----KTEKKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K A ++E G+ + VQ G ++++VK+ ++ + ++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P P+ K A ++ + Y ++ LDLRG R E A ++ D
Sbjct: 688 -PEPKKEK---------AITAVKGKDYHVSLE-----LDLRGERYENALSRVEKYLDDAV 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L+NH V +++ + G T+ +K
Sbjct: 733 LAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK 785
>gi|384176446|ref|YP_005557831.1| MutS2 family protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|349595670|gb|AEP91857.1| MutS2 family protein [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
Length = 785
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 243/806 (30%), Positives = 395/806 (49%), Gaps = 106/806 (13%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
DI G L A G +LSPSE + L AV + +T+ AE DG + PL+ + +
Sbjct: 70 DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124
Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
+ E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
I ++ +HPLL P + V N
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPEQVVAN--------------- 320
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ +
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + TTHY +L NA+ EF +ETL PTY++L G G SNA I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II +A+ + + + + SL + +++ E + S+ E L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551
Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI- 638
+E++ + +L+ + + + QQ +++ A + + ++ + + + + + + LI
Sbjct: 552 KELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRSIKEEHKSFKDHELIN 611
Query: 639 --KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 696
K E A+ ++ +P+ ++ F P G++V V + G K T++E G ++
Sbjct: 612 AKKRLEGAVPTFEKSKKPEK----TKAQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNE 664
Query: 697 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 756
VQ G ++++VK+ ++ I ++ P P+ K A G
Sbjct: 665 WN-VQIGILKMKVKEKDLEFIKSA-------PEPKKEKII-------------TAVKGKD 703
Query: 757 VQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILR 811
S LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+
Sbjct: 704 YHVSLE-LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLK 759
Query: 812 NHPRV--AKYEQESPMNYGCTVAYIK 835
NH V +++ + G TV +K
Sbjct: 760 NHRSVKSSRFGEAGEGGSGVTVVELK 785
>gi|218233457|ref|YP_002369349.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus B4264]
gi|228960821|ref|ZP_04122456.1| hypothetical protein bthur0005_42770 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229048260|ref|ZP_04193828.1| hypothetical protein bcere0027_42280 [Bacillus cereus AH676]
gi|229129836|ref|ZP_04258802.1| hypothetical protein bcere0015_42760 [Bacillus cereus BDRD-Cer4]
gi|229147111|ref|ZP_04275470.1| hypothetical protein bcere0012_42480 [Bacillus cereus BDRD-ST24]
gi|229152748|ref|ZP_04280932.1| hypothetical protein bcere0011_42810 [Bacillus cereus m1550]
gi|296505027|ref|YP_003666727.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
gi|423584921|ref|ZP_17561008.1| MutS2 protein [Bacillus cereus VD045]
gi|423631267|ref|ZP_17607014.1| MutS2 protein [Bacillus cereus VD154]
gi|423657494|ref|ZP_17632793.1| MutS2 protein [Bacillus cereus VD200]
gi|226723046|sp|B7HF67.1|MUTS2_BACC4 RecName: Full=MutS2 protein
gi|218161414|gb|ACK61406.1| MutS2 family protein [Bacillus cereus B4264]
gi|228630726|gb|EEK87371.1| hypothetical protein bcere0011_42810 [Bacillus cereus m1550]
gi|228636360|gb|EEK92831.1| hypothetical protein bcere0012_42480 [Bacillus cereus BDRD-ST24]
gi|228653527|gb|EEL09399.1| hypothetical protein bcere0015_42760 [Bacillus cereus BDRD-Cer4]
gi|228722985|gb|EEL74362.1| hypothetical protein bcere0027_42280 [Bacillus cereus AH676]
gi|228798843|gb|EEM45822.1| hypothetical protein bthur0005_42770 [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|296326079|gb|ADH09007.1| DNA mismatch repair protein mutS [Bacillus thuringiensis BMB171]
gi|401235113|gb|EJR41586.1| MutS2 protein [Bacillus cereus VD045]
gi|401263840|gb|EJR69956.1| MutS2 protein [Bacillus cereus VD154]
gi|401289050|gb|EJR94771.1| MutS2 protein [Bacillus cereus VD200]
Length = 786
Score = 266 bits (680), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 240/837 (28%), Positives = 398/837 (47%), Gaps = 115/837 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
L E ++ E A +L + L+RE++ + + DR LKA+ ++ ++++ A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583
Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
K + + ++Q+ QLR A + + LI+ E A +V+ + N
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633
Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-- 689
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 -----------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYL 729
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 730 DDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|163846758|ref|YP_001634802.1| MutS2 family protein [Chloroflexus aurantiacus J-10-fl]
gi|163668047|gb|ABY34413.1| MutS2 family protein [Chloroflexus aurantiacus J-10-fl]
Length = 823
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 232/828 (28%), Positives = 382/828 (46%), Gaps = 114/828 (13%)
Query: 27 TSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA 85
T+ A +++ P + + D+ + A G +L + + + TL++ + ++L+
Sbjct: 56 TAEARLLLEEWPEVSIGGARDVRRAVQHAARGGILDGTTLREIAATLQSAALLRQRLSR- 114
Query: 86 AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERK 143
LD +R+ L++L + L E I I D + +LD AS L +R E +
Sbjct: 115 --LD----ERFPLLIDLANTLPVIPSLSEAIDRAIGDDGQ---VLDSASPTLARLRHEVR 165
Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
L L+ + AG + +P+IT R R + +KASH+ + G+ + S SGA
Sbjct: 166 VAFNRLQERLQSMIHSSALAGALQEPIITVRNGRYVIPVKASHRREV-RGLVHDQSGSGA 224
Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
T ++EP VE NN L ++E E ILS L+ ++ + I ++ + +DLAFA
Sbjct: 225 TLYIEPMAIVELNNRWRELQSAEAEEVQRILSTLSDQVGAAANLITSTVNTLATLDLAFA 284
Query: 264 RAGFAQWMDGVCPIL---SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A +A P + S + + + +HPLL ++
Sbjct: 285 LARYAIATRSTAPEIVDWRPDDPPSPEPPLRLTRARHPLLPAETV--------------- 329
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
VPID+ + E +++ITGPNTGGKT ++KT GL +LM++A
Sbjct: 330 --------------------VPIDLWLGGEFSLLLITGPNTGGKTVALKTTGLLALMAQA 369
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR--------- 431
G+ +PA RLP F I ADIGD QS+EQ+LSTFS H++ I+ +L+ ++
Sbjct: 370 GMQIPADQPSRLPVFQYIFADIGDEQSIEQSLSTFSSHMANIIRVLQTLTAAQQMPSESD 429
Query: 432 ----------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
+LVL DE+G+GTDP EG ALA +I+ L + L + TTHYA+L
Sbjct: 430 AYALFDDRRPAALVLFDELGAGTDPVEGAALARAIIGRLLELGVLGIATTHYAELKAFAY 489
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+NA+ EF +ETL PTYR+ G G SNAL IA +G D +I++A+ + +
Sbjct: 490 TTPGVQNASVEFDIETLAPTYRLSIGIPGRSNALAIAARLGLDPTLIEQARSFI-----D 544
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE--------IEDEAKDLDRRA 593
R++ + +L + ER + + A L + + YR+ E A
Sbjct: 545 RKEAQVEDLLAGIQRERDAAAAALQRAEELRLD-AERYRDRLAAEQQAFAAERAAALEAA 603
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
E ++V+Q+L + + TV + Q + + + + ++S+ A+A R
Sbjct: 604 RAEIEAELREVRQQLRRLREEFRTV--NISRQWLEEAEKRLATTAEQSQQAVA------R 655
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
+ + + Q G+QV V S+G +V + +D T VQ G R+ V N+
Sbjct: 656 LNVQTQPAPPPPAEKPLQVGDQVQVTSIGLN-GEIVAIDEEDQTATVQVGGFRMTVSFND 714
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
++ R + + +D Q + + P V + D+RG R E
Sbjct: 715 LK---------------RAKGKSDDGQRFTPPARTVHLPPTPDVSM---TFDMRGWRAAE 756
Query: 774 ASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
S +LD L A + +IHG GTG +++ V E+L HP VA +
Sbjct: 757 VSDRLDRYLNDAYLAGLHQVRLIHGKGTGALRQVVRELLAGHPLVASF 804
>gi|327475227|gb|AEA77208.1| MutS2 [Bacillus sp. 15.4]
Length = 784
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 248/818 (30%), Positives = 383/818 (46%), Gaps = 106/818 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SLEE ++ +T A +++ + L I DI + A G +LSP E V T+ A
Sbjct: 39 SLEEVIRIQEETDEAAGILRLKGHAPLGGIFDIRPAVKRATIGGMLSPQEFVQVASTIYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ + + E D D L L E + LT LE KI +D ILD AS+
Sbjct: 99 SRQIRLFMEDLEEEDIDLL----ILSEKVSEMMVLTPLEHKIRAVVDENG-AILDSASDP 153
Query: 135 LELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK--Y 188
L IR++ + N E L+ +++ AQ + I IT R R + +K ++ Y
Sbjct: 154 LRQIRSQIRANEGRIREKLERMIRSSNAQKMLSDAI----ITIRNDRYVIPVKQEYRGNY 209
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
GI + SSSG T F+EP+ V NN L E E IL+ LT E++ ++
Sbjct: 210 ---GGIIHDQSSSGQTLFIEPEVIVTLNNALRELKLKEGLEIERILTELTVEVSGYSEDL 266
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++ + +ID F +A + + + G P ++ + + + + +HP+L
Sbjct: 267 LTIVAILADIDFMFTKAKYGKSIKGTKPEINGEQVLKLNRA------RHPML-------- 312
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
P++ V N DI++ + +VITGPNTGGKT ++
Sbjct: 313 --------PIEEAVAN-------------------DIELGKDFSSIVITGPNTGGKTVTL 345
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM +AGL +PA + ++ F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 346 KTVGLLTLMGQAGLQIPALDGSKMGVFQNVYADIGDEQSIEQSLSTFSSHMVNIVDILGK 405
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V ESLVL DE+G+GTDP EG ALA SIL + R V TTHY +L N
Sbjct: 406 VDHESLVLFDELGAGTDPQEGAALAISILDEVHQRGAKVVATTHYPELKAYGYNRDGVIN 465
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETL PTY++L G G SNA I+K +G ++I RA+ + E +
Sbjct: 466 ASVEFDVETLSPTYKLLIGVPGRSNAFEISKRLGLADRVINRAKSHIGTDSKEIEN---- 521
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
+ SL + R+ ES A L + ++++++ + + + L K + Q +
Sbjct: 522 -MIASLEKSRKDAESDYDEAHELLKQADMMHKDMQKQMMEFYDKRDSLYEKAELKASQVV 580
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI-VEAHRPDDDFS---VSETN 664
AK + + V++D + SAD +KE E A +E P+ D S + T
Sbjct: 581 EKAKEEAEEVIRDLRKMRLEKSAD-----VKEHELIDAKKRIEGAAPNLDRSKPKKASTG 635
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P G++V V + K + +V + VQ G M+++VK+++++ I K+
Sbjct: 636 QRELKP--GDEVKVLTFDQKGHLIEKVSSKE--WQVQMGIMKMKVKESDLQFIQAEKK-- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDI 780
P + +D G LDLRG R E A +D
Sbjct: 690 -VETKPMATVKGKDFHVGL-------------------ELDLRGERFENALSRVEKYIDD 729
Query: 781 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 818
AL R + +IHG GTG +++ V E L+NH V +
Sbjct: 730 ALLAGYPR--VSIIHGKGTGALRQGVQEYLKNHRSVKR 765
>gi|253577240|ref|ZP_04854559.1| MutS2 family protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843354|gb|EES71383.1| MutS2 family protein [Paenibacillus sp. oral taxon 786 str. D14]
Length = 788
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 243/837 (29%), Positives = 397/837 (47%), Gaps = 106/837 (12%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE+ ++LL T A + ++ P I DI + A G L+P E+ + TL
Sbjct: 40 LEDVKRLLQATDEAFKVDRLKGAP-GFGGIVDITPAVKRARIGGTLNPHELLGIATTLEG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKLLIILDRASE 133
+ + + E + PLL L + + LE+ I CID + +LD AS
Sbjct: 99 SRRIKRYIATMHE------EHEVPLLYHLSDTLSDQKPLEDAIKRCID-ESAEVLDSASP 151
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
+L IR E + R E LD++++ + + LIT R R + +KA ++
Sbjct: 152 ELATIRRELRSGEVRIREKLDAMIRSASVSKM----LQDQLITIRGDRFVIPVKAEYRAH 207
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S SGAT F+EP+ V NN E E IL LTA + + +
Sbjct: 208 F-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRLREEREIEVILQKLTALVGEQAELLL 266
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
Y D + ++D FA+A A+ + G P ++ + + +HPL+
Sbjct: 267 YDGDVLGQLDFIFAKARLARELKGTLPRMNDRGFIKLKKG------RHPLI--------- 311
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P +D VPID+++ + +++TGPNTGGKT ++K
Sbjct: 312 -------P-------------------ADQVVPIDVELGNQYTTIIVTGPNTGGKTVTLK 345
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL SLM+ +GL++PA++ +L FD I ADIGD QS+EQ+LSTFS H++ I+ IL +
Sbjct: 346 TIGLLSLMAMSGLFVPAEDGSQLCVFDAIYADIGDEQSIEQSLSTFSSHMTNIISILRQM 405
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ +SLVL+DE+G+GTDP+EG ALA +IL+++ V TTH+++L + NA
Sbjct: 406 TPKSLVLLDELGAGTDPAEGSALAIAILEHIHSLGCRMVATTHFSELKAYAYERKGVINA 465
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF + TL PTYR+L G G SNA IA+ +G +I++ A+ V + R
Sbjct: 466 SMEFDVATLSPTYRLLVGIPGRSNAFAIAERLGLPERILEYARGEV-----TEEDMRVEN 520
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL + R E + TA L E+ +L R E + L+++ K ++ +
Sbjct: 521 MIASLEQNRLGAEQERETAEQLRREMEELRRRHAAELEKLEQQRDKRLEKAEEEAAAIIA 580
Query: 610 FAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
A+ + + ++ D + + +A + + LI + A + + +
Sbjct: 581 KARQEAERIISDLRRLAMEEGAAVKEHKLIAARKQLDEAEPQRRKKSAAARKAAKPPRQI 640
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI---PNSKRKNA 725
P G++V V SL K VVE+ G+ + + VQ G M+++V +++ I P S K
Sbjct: 641 EP--GDEVMVYSLNQK-GHVVELSGNKEAI-VQLGIMKMKVSLDDMELIAAPPAS--KPV 694
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALA 783
AP +++ R + + LDLRG +EEA ++D I A
Sbjct: 695 QRTAPNVKRT--------------------RDENVRTELDLRGANLEEALIEVDRFIDEA 734
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY-----GCTVAYIK 835
+ +++IHG GTG+++ + E LR H + + NY G TVA +K
Sbjct: 735 YLSNLGQIYIIHGKGTGILRSGISEYLRKHKHIKSFRLG---NYGEGGTGVTVAELK 788
>gi|256847954|ref|ZP_05553398.1| DNA mismatch repair protein MutS2 [Lactobacillus coleohominis
101-4-CHN]
gi|256715014|gb|EEU29991.1| DNA mismatch repair protein MutS2 [Lactobacillus coleohominis
101-4-CHN]
Length = 791
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 203/691 (29%), Positives = 327/691 (47%), Gaps = 112/691 (16%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R + ++A ++ G+ + S+SG T ++EP+ VE NN RL ++I E
Sbjct: 188 IITMRNDRYVIPVEAHYRSRF-GGVVHDQSASGQTLYIEPQNVVEINN---RLRQAQIEE 243
Query: 230 ETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
+ L+ L+A IA +EI + +D A+A A M P+++
Sbjct: 244 RQEVRRVLAELSALIAPYRKEIANNERLLGHLDFVNAKARLATKMHATLPVIND------ 297
Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
D IN+ +HPL+ +P + VP DI+
Sbjct: 298 DGLINLRQARHPLI---------------DPQRV--------------------VPNDIQ 322
Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
+ + R +VITGPNTGGKT ++KTLGL LM ++G ++PA ++ FD + ADIGD Q
Sbjct: 323 LGDQYRTIVITGPNTGGKTITLKTLGLIQLMGQSGFFIPANEGSQITIFDNVFADIGDEQ 382
Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
SLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA +IL ++
Sbjct: 383 SLEQNLSTFSGHMENVKRILEQITERSLVLLDELGAGTDPKEGAALAMAILNQIQQVGSE 442
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
V+TTHY +L + + NA+ EF ++T +PTYR++ G G SN + IA+ +G
Sbjct: 443 VVITTHYPELKVYGFERPQTINASMEFDVDTFQPTYRLMLGVPGQSNGIAIAQRLGLAST 502
Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
+I AQ LV + + + + L+E+R++ A L AE ++E +
Sbjct: 503 VINDAQSLV-----KDDSQKLNAMIGELVEQRKQARENQERLAKLVAENQQKATDLEQKL 557
Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF------------ENQLRDASADEI 634
+ + L K Q ++ AK + D ++ EN+L DA ++
Sbjct: 558 NRFNEQRDDLYEKARMQANHQVADAKRKADRIIHHLRQMEVQRGTQIKENELIDAQG-QL 616
Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
N+L ++ +++ + + + G+ V VKS G ++ T++ G
Sbjct: 617 NALHRDPRLKRNKVLQRAKQKHNLKI------------GDAVKVKSYG-QVGTLIAKRGK 663
Query: 695 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 754
VQ G +++ + + ++ + S + +E
Sbjct: 664 HQWE-VQLGILKMAIDERDLEKVS----------------------SKVLAQAEKEQVVK 700
Query: 755 PR----VQTSKNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERV 806
P+ VQT + S LDLRG R E A L I A + + +IHG GTG +++
Sbjct: 701 PKRVRTVQTRRTSARLDLRGQRYEPAMANLSSFIDHALLNNLPSVTIIHGKGTGAIRKGT 760
Query: 807 LEILRNHPRVAKYEQESPMNY--GCTVAYIK 835
E LR++PRV +E SP N G T+ Y +
Sbjct: 761 QEYLRSNPRVKSFEYASPSNGGDGATIVYFE 791
>gi|261366884|ref|ZP_05979767.1| DNA mismatch repair protein MutS [Subdoligranulum variabile DSM
15176]
gi|282570998|gb|EFB76533.1| MutS2 family protein [Subdoligranulum variabile DSM 15176]
Length = 790
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 255/865 (29%), Positives = 403/865 (46%), Gaps = 162/865 (18%)
Query: 18 EESQKLLNQTSA--ALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
E+ + L+QT+A +L + P + ++ I A G +LS E+ + TLR
Sbjct: 41 EDERFALSQTNAVNSLLIKNGSP-RFGRVSEVRRITAHAQKGGILSMGELLEIAATLRNF 99
Query: 76 NNV--WKKLTEAAELDGDSLQRYS----PLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
+ W L+E L D L Y+ P+LE + + L+ E + D
Sbjct: 100 AGLSQWYGLSEHEMLPTDDL-FYALAPQPVLEKQISESILSPEE-------------MAD 145
Query: 130 RASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
AS L +R + ++ ++ LD+++K F + +++ R R V ++A
Sbjct: 146 TASVTLHDLRRKIRQTEDSIRTKLDNIIKNSTTNKF----LQDAVVSLRNGRYVVPVRAE 201
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ + G+ +VSS+GAT F+EP VE N ++L E E T ILS +A++ E
Sbjct: 202 YRGEV-GGVIHDVSSTGATIFVEPTAVVEANARIMQLRAQEQEEITRILSAFSAQVGSLE 260
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ Y + +L+IDL A+A A + P +S + + + +HPL+ +
Sbjct: 261 PQFSYSYEAMLQIDLLLAKARLAVEQNAFMPTVSDTVYFRLNRA------RHPLIDKKQV 314
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
VP+DI + E +VITGPNTGGKT
Sbjct: 315 -----------------------------------VPVDIALGEEYDTLVITGPNTGGKT 339
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
S+KT GL + M++ G +PA + F L DIGD QS+EQ+LSTFSGH+ RI I
Sbjct: 340 VSIKTAGLLNAMAQHGFLIPAHESSVVCNFREYLVDIGDEQSIEQSLSTFSGHMKRISGI 399
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L+L +L LIDE+G+GTDP+EG ALA SIL+ LR + L + TTHYA+L +
Sbjct: 400 LQLAGHGTLTLIDELGAGTDPAEGAALAVSILEQLRRQGSLLMATTHYAELKVYALETPG 459
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
NA+ EF++ETL PTY++ G G SNA I+ +G ++II A
Sbjct: 460 VVNASCEFNVETLMPTYKLSVGVPGKSNAFLISAKLGIPQEIIDAA-------------- 505
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI---EDEAKDLDRRAAH-LKAKE- 600
R + + + S+ A++ DL ++ +DEA+ A H L++ E
Sbjct: 506 ------------RNHMSNDDKRLDSVLAQLDDLKLQLKGAQDEAEKARYEAEHALESAEK 553
Query: 601 -----TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV----EA 651
+Q ++EL A+ Q ++Q +N+ + + DE+ + K+ +++ A E
Sbjct: 554 KREELIEQGKRELEDARRQAHELMQQVQNEAYNLT-DELRRIQKDEKTSAAQRAVRAREI 612
Query: 652 HRPDDDFSVSETNT----SSFTP----QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
R D + + T+ F P Q G++V + L ++LATV P D V V+ G
Sbjct: 613 ARKDTETLLKRTDAKPVPKKFVPLKEVQIGQEVVIAEL-NQLATVTARPDRDGMVEVRAG 671
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN- 762
M+ +V +R P+ K R Q+E R+S + RVQ KN
Sbjct: 672 IMKTKVPLTGLRA-PDKMEK---------RPQREPRRSST------------RVQLDKNR 709
Query: 763 ----SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP-- 814
L+L G VEEA ++D L + L++IHG GTG ++ + + LR H
Sbjct: 710 KTSMELNLLGYTVEEALAEVDKFLDSGMLRGQQTLYIIHGNGTGALRSAIQKHLRTHKAV 769
Query: 815 ---RVAKY-EQESPMNYGCTVAYIK 835
R+ +Y E ES G TV +K
Sbjct: 770 KSFRLGRYGEGES----GVTVVELK 790
>gi|295397442|ref|ZP_06807529.1| DNA mismatch repair protein MutS [Aerococcus viridans ATCC 11563]
gi|294974343|gb|EFG50083.1| DNA mismatch repair protein MutS [Aerococcus viridans ATCC 11563]
Length = 793
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 246/806 (30%), Positives = 393/806 (48%), Gaps = 126/806 (15%)
Query: 57 GQLLSPSEICAVRRTLRA---VNNVWKKLTEA-AELDGDSLQRYSPLLELLKNCNFLTEL 112
G L+ E+ AV R LRA V+N + KL EA EL +Q YS + + + + ++
Sbjct: 81 GADLNGKELAAVGRVLRASGEVSNFFSKLKEAKVEL----MQLYSIADDFIDMRDLMRKM 136
Query: 113 EEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
+ I D + D AS L +R KR + L + + +A + + +IT
Sbjct: 137 QNAI--ADDGS---VYDNASSTLHGLRQGIKREEAGIRVKLDHII-RSNKASYLSEAIIT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R +R + +K ++ G+ + SSSG T ++EP+ ++ NN L E E
Sbjct: 191 IRNNRFVIPVKQEYRNAF-GGVVHDQSSSGQTLYIEPQTVLDANNHLRSLQVQEDEEIKR 249
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
I L+AE+A EI R+ ++DL A+ FA+ + PIL+++S I++
Sbjct: 250 IFQELSAELAPYTSEIAENNQRLGDLDLIQAKFFFAREIGANRPILANES-----ERIDL 304
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+ +HPLL KS V N DI E
Sbjct: 305 KEARHPLL----------------DRKSVVAN-------------------DIHFSHEYN 329
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
++VITGPNTGGKT ++KT+GL LM+++GLY+ AK R+ F+ I ADIGD QS+EQ+L
Sbjct: 330 MIVITGPNTGGKTITLKTVGLLQLMAQSGLYITAKADSRVEIFNEIFADIGDEQSIEQSL 389
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ---YLRDRVGLAVV 469
STFSGH++ I+ I+E SLVLIDE+GSGTDP EG A+A ++L +L RV +
Sbjct: 390 STFSGHMTNIIRIVEAADEHSLVLIDELGSGTDPQEGAAIAIAVLNRFAFLNARV---MA 446
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L + NA+ EF+ TL PTY++L G G SNA +I++ +G ++++
Sbjct: 447 TTHYPELKTYAYEHPGAINASMEFNEITLEPTYKLLIGVPGRSNAFDISQRLGLPVEMVE 506
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
A+ ++ E Q+L E LE+Q L AE + E+ DL
Sbjct: 507 EARSYIQ------------EDSQNLNEMLLDLEAQRHEYEDLSAEAAKDLADAENLLNDL 554
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL---------IKE 640
+ A L+A + Q +N A+ + + +V+D + + DA EI IKE
Sbjct: 555 KKAQARLEADK----QTYMNRARKEANQLVEDTKTKA-DAILAEIREWQINHPTIGNIKE 609
Query: 641 SE-----SAIAAIVEAHRPDDDFSVSETN-----TSSFTPQFGEQVHVKSLGDKLATVVE 690
E SA++ + + + + + + + +SF + G++V+V + G + T+VE
Sbjct: 610 HEMIDRQSALSNLTQEEQLEKNKILQKAKKNKERKASF--EVGDEVNVLTYGQR-GTLVE 666
Query: 691 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 750
D +VQ G +++ V + ++ + +K +++ ++G S
Sbjct: 667 KREKD--WVVQMGMLKMEVAEKDLTLVDEKPKK------------EKNHRAGLKAS---- 708
Query: 751 ASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLE 808
+ ++ SLDLRG R EEA +L+ I A + +IHG GTG +++ V
Sbjct: 709 -----KAKSVNTSLDLRGERYEEAMIRLNNFIDSALLAGHGQVTIIHGHGTGALRQGVQM 763
Query: 809 ILRNHPRVAKYEQESPMNYGCTVAYI 834
L+NHPRV +E +P N G A I
Sbjct: 764 ALKNHPRVESFEF-APYNMGGNGATI 788
>gi|363890216|ref|ZP_09317557.1| hypothetical protein HMPREF9628_01999 [Eubacteriaceae bacterium
CM5]
gi|361965897|gb|EHL18859.1| hypothetical protein HMPREF9628_01999 [Eubacteriaceae bacterium
CM5]
Length = 785
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 212/729 (29%), Positives = 349/729 (47%), Gaps = 105/729 (14%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS DL IR + +N+ + L ++ + + + ++T R R V +K+ +
Sbjct: 142 ISDDASADLRRIRRQINSEKQNIKNKLNEIVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ P GI + SSSGAT F+EP V NN L E E IL+ LT+ + +
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+I + D + ++D A+ + M+ + P ++ + ++ ++ +HPL+
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K V +S + +G E ++ITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL SLM +AGL++P + FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ V SLVL DE+G+GTDP EG LA SIL+ L+ + L V TTHY++L
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILETLKSKNILTVATTHYSELKNYALTQENV 459
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LV 535
NA+ EF + TL PTY++L G G SNA I+K +G +II A++ ++
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIKTDSIQMEDVI 519
Query: 536 ERLRPERQQH-RKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
+L R + +K E Q +E+ R KLE++ + + ++ IED AK+
Sbjct: 520 SKLEKIRTDYEKKQEELQKELEDVKYIRLKLENKEQRQKEQNKKL------IED-AKEKA 572
Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 650
R+ E + + LN K++ + ++ + Q+ + + K ++S I +
Sbjct: 573 RKLIEDAKSEADIISKNLN--KIKNSSDYKNIDRQMNELKTNINKYKEKYAKSKEELIAK 630
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
+ +P ++ +V G+ V+V S K A V+ V D VL++ G +++ VK
Sbjct: 631 SSKPLENINV------------GDIVYVNSFA-KNAKVLSVDDAKDEVLIELGAIKMTVK 677
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
K N+ K K + L + +T++ S+DLRGM
Sbjct: 678 KENLSNQEKIKEKKSTKAGKILTN---------------------KTKTAQTSVDLRGMD 716
Query: 771 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMN 826
+E A ++D I + S + +IHG+GT V+K+ + L+ H + + Q
Sbjct: 717 LETAILEVDKYIDNSYLAGLSEVTIIHGVGTLVLKKGIQSYLKKHKHIKSFRDGQYGEGG 776
Query: 827 YGCTVAYIK 835
G TVA +K
Sbjct: 777 MGVTVAILK 785
>gi|402816098|ref|ZP_10865689.1| protein MutS2 [Paenibacillus alvei DSM 29]
gi|402506002|gb|EJW16526.1| protein MutS2 [Paenibacillus alvei DSM 29]
Length = 787
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 255/865 (29%), Positives = 418/865 (48%), Gaps = 163/865 (18%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LEE ++ L T A+ + + + S + DI + A +LS +E+ + + A
Sbjct: 40 LEEVKRRLQATDEAMTIDRLKGGAPFSGVADIRPAVKRARINAMLSANELWEISVLIFAG 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSP---LLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
V + + +S+ +P ++EL + ++ ELE++I CID + + LD+AS
Sbjct: 100 RRVRRHI--------ESVHEDNPVPLMMELADSLSWQKELEDEIRRCIDEQGEV-LDQAS 150
Query: 133 EDLELIRAERK----RNMENLDSLLKKV-AAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
+L R E + R E L+S+++ A+++ Q + LIT R R + +K+ ++
Sbjct: 151 SELAAARRELRIGEARIREKLESMIRSSNASKMLQ-----EQLITIRNDRYVIPVKSEYR 205
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + SSSGAT F+EP+ V NN +L +++ EE I +L+ +
Sbjct: 206 GHY-GGIVHDQSSSGATLFIEPEAIVTLNN---KLRETKLKEEREIERILSQLTEHVGLQ 261
Query: 248 IKYLM---DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ L+ D + ++D FA+A A M P ++ + ++ I+G +HPL+
Sbjct: 262 VDLLLNDTDIMEQLDFIFAKARLAHEMKATLPRMNDRGYMKL-----IKG-RHPLI---- 311
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
D E VPID+++ + +++TGPNTGGK
Sbjct: 312 ----------------DREKV---------------VPIDVELGNDYTSIIVTGPNTGGK 340
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T S+KT+GL SLMS +GL++PA++ ++ FD I ADIGD QS+EQ+LSTFS H++ I+
Sbjct: 341 TVSLKTMGLLSLMSMSGLFIPAQDGSQMCVFDAIYADIGDEQSIEQSLSTFSSHLTNIIR 400
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKD 483
IL ++ +SLVL+DE+G+GTDP+EG ALA +IL+++ R+G +V TTHY++L +
Sbjct: 401 ILGEMTPKSLVLLDELGAGTDPAEGSALAIAILEHIH-RLGCRIVATTHYSELKAYAYER 459
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
NA+ EF ++TLRPTYR+L G G SNA IA+ +G II+ A+ V +
Sbjct: 460 KGVINASMEFDVQTLRPTYRLLVGVPGRSNAFAIAERLGLPSSIIEHARGEV-----TEE 514
Query: 544 QHRKSELYQSLMEER-------------RKLESQARTA-----ASLHAEIMDLYREIEDE 585
R + SL E R RK R A LHAE +E
Sbjct: 515 DMRIETMIASLEENRLRAEAEREEAERIRKETEHLRAVLASEEAKLHAERDKRIERASEE 574
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 645
A+++ R+A H E + EL + Q+ N +KE
Sbjct: 575 AREIVRKARH----EADDIITELKL-------LAQEGVN-------------VKEH---- 606
Query: 646 AAIVEAHRPDDDFSVSETNTSSFTP--------QFGEQVHVKSLGDKLATVVEVPGDDDT 697
+ EA + D+ + + S P + G+ V V SL K +VVE+ G++
Sbjct: 607 -LLTEARKRLDEAAPASKLASKAKPAKKQARKIEAGDDVMVYSLNQK-GSVVELAGNE-- 662
Query: 698 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 757
+VQ G M+++V +++ + +S K ++ G++ + R
Sbjct: 663 AVVQLGIMKMKVPMDDLELVTSSASKQSSKSV-------------KTGTNVKRT----RA 705
Query: 758 QTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
++ LDLRG +EEA ++D L A + +++IHG GTG+++ + E LR H
Sbjct: 706 DNVRSELDLRGANLEEAIIEVDRFLDEALLANLGQVYIIHGKGTGILRTGIQEFLRKHKH 765
Query: 816 VAKYEQESPMNY-----GCTVAYIK 835
V + NY G TVA +K
Sbjct: 766 VKTFRLG---NYGEGGTGITVAELK 787
>gi|70726818|ref|YP_253732.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus haemolyticus JCSC1435]
gi|82592981|sp|Q4L5E9.1|MUTS2_STAHJ RecName: Full=MutS2 protein
gi|68447542|dbj|BAE05126.1| MutS-like protein [Staphylococcus haemolyticus JCSC1435]
Length = 783
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 229/809 (28%), Positives = 384/809 (47%), Gaps = 104/809 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + I+ +++ A G +L+ +E+ V+R ++ V N +K + + + +Y L
Sbjct: 65 LSGLAKISPLIHRANIGGVLNVTELNLVKRLIQ-VQNQFKTFYNQLLEEDEQVVKYPILN 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + L++L ++I D L D AS +L+ IR++ +R +NLD ++K
Sbjct: 124 DKMNQLPILSDLFQEINEKCDTHDL--YDSASYELQGIRSKISSTNQRIRQNLDRIVKSQ 181
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + +IT R R + +KA ++ GI + S+SG T ++EP VE N
Sbjct: 182 ANQ----KKLSDAIITVRNDRNVIPVKAEYRQDFK-GIVHDQSASGQTLYIEPSSIVEMN 236
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT +A +E + + + V+ +ID A+A +A+ + G
Sbjct: 237 NQISRLRNDEAVERERILTELTGMVA-AEADGCLIAESVMGQIDFLTAKARYARSIKGTK 295
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P D ++ + HPLL N + V + +
Sbjct: 296 PTFYK------DRTVYLPNAYHPLL-----------------------NKDTVVANTIEF 326
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 327 VDDI------------ETVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVF 374
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 375 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQETDKNSLVLFDELGAGTDPSEGAALAMS 434
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R+ L + TTHY +L NA+ EF + TL PTY++L G G SNA
Sbjct: 435 ILDHVREIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
+I++ +G II +A+ ++ + + + +SL + ++++ Q L E
Sbjct: 495 DISRKLGLSLGIINKAKTMI-----GTDEQEINSMIESLEKNSKRVDEQRIELDRLLKEA 549
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN 635
+ ++E + + L + ++ Q + A + D+++++ LRD +
Sbjct: 550 RKTHDDLEHQYEQYKSYEKKLMDEAKEKANQRVKSATKEADSILKELRT-LRDQKGAD-- 606
Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVE 690
+KE E I + + DD + + ++ G++V V S G K V
Sbjct: 607 --VKEHE----LIDKKKQLDDQYEAKSLKQNVQKQKYDEIHAGDEVKVLSYGQK--GEVL 658
Query: 691 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 750
++ +VQ G +++++ PI + ++ P +++R
Sbjct: 659 ELVSEEEAVVQMGIIKMKL------PIEDLEKTKKKKEKPSKMVTRQNR----------- 701
Query: 751 ASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLE 808
QT K L LRG R EEA +LD I A + +++IHG GTG +++ V
Sbjct: 702 -------QTIKTELHLRGYRYEEAVSELDQYIDQAVLSNYEQVYIIHGKGTGALQKAVQN 754
Query: 809 ILRNHPRVAKYEQESPM--NYGCTVAYIK 835
L H V Y P +G TVA +K
Sbjct: 755 HLNKHKSVKSYRGGMPSEGGFGVTVAELK 783
>gi|222524571|ref|YP_002569042.1| MutS2 family protein [Chloroflexus sp. Y-400-fl]
gi|222448450|gb|ACM52716.1| MutS2 family protein [Chloroflexus sp. Y-400-fl]
Length = 819
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 232/828 (28%), Positives = 382/828 (46%), Gaps = 114/828 (13%)
Query: 27 TSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEA 85
T+ A +++ P + + D+ + A G +L + + + TL++ + ++L+
Sbjct: 52 TAEARLLLEEWPEVSIGGARDVRRAVQHAARGGILDGTTLREIAATLQSAALLRQRLSR- 110
Query: 86 AELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIRAERK 143
LD +R+ L++L + L E I I D + +LD AS L +R E +
Sbjct: 111 --LD----ERFPLLIDLANTLPVIPSLSEAIDRAIGDDGQ---VLDSASPTLARLRHEVR 161
Query: 144 RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGA 203
L L+ + AG + +P+IT R R + +KASH+ + G+ + S SGA
Sbjct: 162 VAFNRLQERLQSMIHSSALAGALQEPIITVRNGRYVIPVKASHRREV-RGLVHDQSGSGA 220
Query: 204 TYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFA 263
T ++EP VE NN L ++E E ILS L+ ++ + I ++ + +DLAFA
Sbjct: 221 TLYIEPMAIVELNNRWRELQSAEAEEVQRILSTLSDQVGAAANLITSTVNTLATLDLAFA 280
Query: 264 RAGFAQWMDGVCPIL---SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A +A P + S + + + +HPLL ++
Sbjct: 281 LARYAIATRSTAPEIVDWRPDDPPSPEPPLRLTRARHPLLPAETV--------------- 325
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
VPID+ + E +++ITGPNTGGKT ++KT GL +LM++A
Sbjct: 326 --------------------VPIDLWLGGEFSLLLITGPNTGGKTVALKTTGLLALMAQA 365
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR--------- 431
G+ +PA RLP F I ADIGD QS+EQ+LSTFS H++ I+ +L+ ++
Sbjct: 366 GMQIPADQPSRLPVFQYIFADIGDEQSIEQSLSTFSSHMANIIRVLQTLTAAQQMPSESD 425
Query: 432 ----------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
+LVL DE+G+GTDP EG ALA +I+ L + L + TTHYA+L
Sbjct: 426 AYALFDDRRPAALVLFDELGAGTDPVEGAALARAIIGRLLELGVLGIATTHYAELKAFAY 485
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+NA+ EF +ETL PTYR+ G G SNAL IA +G D +I++A+ + +
Sbjct: 486 TTPGVQNASVEFDIETLAPTYRLSIGIPGRSNALAIAARLGLDPTLIEQARSFI-----D 540
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE--------IEDEAKDLDRRA 593
R++ + +L + ER + + A L + + YR+ E A
Sbjct: 541 RKEAQVEDLLAGIQRERDAAAAALQRAEELRLD-AERYRDRLAAEQQAFAAERAAALEAA 599
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
E ++V+Q+L + + TV + Q + + + + ++S+ A+A R
Sbjct: 600 RAEIEAELREVRQQLRRLREEFRTV--NISRQWLEEAEKRLATTAEQSQQAVA------R 651
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
+ + + Q G+QV V S+G +V + +D T VQ G R+ V N+
Sbjct: 652 LNVQTQPAPPPPAEKPLQVGDQVQVTSIGLN-GEIVAIDEEDQTATVQVGGFRMTVSFND 710
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
++ R + + +D Q + + P V + D+RG R E
Sbjct: 711 LK---------------RAKGKSDDGQRFTPPARTVHLPPTPDVSM---TFDMRGWRAAE 752
Query: 774 ASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
S +LD L A + +IHG GTG +++ V E+L HP VA +
Sbjct: 753 VSDRLDRYLNDAYLAGLHQVRLIHGKGTGALRQVVRELLAGHPLVASF 800
>gi|319892134|ref|YP_004149009.1| Recombination inhibitory protein MutS2 [Staphylococcus
pseudintermedius HKU10-03]
gi|317161830|gb|ADV05373.1| Recombination inhibitory protein MutS2 [Staphylococcus
pseudintermedius HKU10-03]
Length = 782
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 234/796 (29%), Positives = 376/796 (47%), Gaps = 111/796 (13%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L+ E+ A++ TL V N +K D +++ Y L ++ LT L + I
Sbjct: 81 GGTLNVQELNAIK-TLIQVQNQFKTFYNQLVEDEETV-NYEILDGQMQQLPVLTHLYQSI 138
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
D + L D AS +L+ IR+ + + + + L ++ + ++T R
Sbjct: 139 HQKCDTQDL--FDSASMELQAIRSRIAKTNQRVRAQLDRMVKSTSNQKKLSDAIVTVRNE 196
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R + ++A ++ +GI + S+SG T ++EP VE NN RL + E E IL+
Sbjct: 197 RNVIPVRAEYRQDF-NGIVHDQSASGQTLYIEPSAVVELNNQISRLRSEEATEVQRILAE 255
Query: 237 LTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
LTAE+A+ + ++V+ +D +A +A + G P + + V +
Sbjct: 256 LTAEVAEEAEAC-LISEQVMGHLDFLIGKARYAAKIKGTKPTFAVERQVYLPKAF----- 309
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
HPLL D V I+ E + V+
Sbjct: 310 -HPLL-----------------------------------DRDTVVANTIEFESSIQTVI 333
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KTLGL LM+++GL +P + +L FD + DIGD QS+EQ+LSTF
Sbjct: 334 ITGPNTGGKTVTLKTLGLIILMAQSGLLIPTLDGSQLSVFDNVFCDIGDEQSIEQSLSTF 393
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
S H+ IV+ILE + +SL+L DE+G+GTDPSEG ALA SIL ++ L + TTHY +
Sbjct: 394 SSHMKTIVNILEEANDKSLILFDELGAGTDPSEGAALAMSILDHVHGMGALVMATTHYPE 453
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L NA+ EF ++TL PTY++L G G SNA +I+K +G KII A+ ++
Sbjct: 454 LKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKRLGLGLKIINHAKSMI 513
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYREIEDEAKD 588
+ + +E+ SL + ++++ Q R A+ +H ++ Y + ++
Sbjct: 514 -----GQDEQEINEMIASLEKNAKRVDDQRIELDRLVREASQIHNDLSRAYEQYQNMESR 568
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
L A K K Q+V+ + A D LRD D+ + +KE E I
Sbjct: 569 LIEEA---KDKANQRVKAAMEEA--------DDILKSLRDMR-DQKGAEVKEHE----LI 612
Query: 649 VEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
+ R +D + + ++ G++V V S G K V+EV D++ V VQ G
Sbjct: 613 DQRKRLEDQYEAKSIKQNVQKQKWDEIKAGDEVKVLSYGQK-GEVLEVLSDEEAV-VQMG 670
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
+++++ P+ + ++K A P+ + +R T K
Sbjct: 671 IIKMKL------PLSDLEKKEKAKEQPKKVVTRTNR------------------STVKME 706
Query: 764 LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 821
LDLRG R +EA LD L A + +++IHG GTG +++ V + L+ H VA Y
Sbjct: 707 LDLRGYRYDEAMVALDQYLDQAVLSNYEDVYIIHGKGTGALQKGVQQHLKRHKSVATYRG 766
Query: 822 ESPM--NYGCTVAYIK 835
P +G TVA +K
Sbjct: 767 GMPSEGGFGVTVATLK 782
>gi|399924139|ref|ZP_10781497.1| MutS2 family protein [Peptoniphilus rhinitidis 1-13]
Length = 790
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 240/839 (28%), Positives = 407/839 (48%), Gaps = 99/839 (11%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQS--QPLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
I +E + LN+T+ AL ++ S +P L I DI I+ G LS S + V
Sbjct: 37 IEISTDFDEIKNRLNETNEALKLILSKGEP-QLFGIVDIKNIIKRVEIGGSLSASALLQV 95
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
LR + L + E + D + + + +L+++ +LE++I I + I
Sbjct: 96 SDFLRVSRGLKTYLKK--ESNSDESIKLNYIDKLIEDLYTEKKLEDEINSKIISEEEI-A 152
Query: 129 DRASEDLELIR---AERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
D AS +L IR A++K +++N L+ +L QA + ++T R R V +K
Sbjct: 153 DDASRELLRIRRGIADKKNSIKNKLNGILNN------QANYLQDAIVTLRDGRYVVPVKI 206
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K + G+ ++SSSG T ++EP VE NN L E AE IL L+ +A+S
Sbjct: 207 ENKSRVR-GLVHDISSSGQTAYIEPMSVVEANNELKELYIKENAEIEKILRELSELVAES 265
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
IK D+++E+D FA+A P ++ D IN+ HP L
Sbjct: 266 SEYIKSNQDKLIELDFIFAKARLGIKYHANMP------KINKDGRINLIRAYHPFL---- 315
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+ I+ VPIDI + + ++ITGPNTGGK
Sbjct: 316 ----------------------------DRKIA---VPIDINLGIDFSSLIITGPNTGGK 344
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T S+KT+GL SLM++ GL +P + + F+ + ADIGD QS+EQ+LSTFS H+ IV
Sbjct: 345 TVSLKTVGLLSLMTQYGLLIPCEESSEIAIFEKVFADIGDEQSIEQSLSTFSSHMVNIVY 404
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
L+ V++ SLVL DE+G+GTDP+EG ALA +I++ + R + TTHY L
Sbjct: 405 TLKNVTKNSLVLFDELGAGTDPTEGAALARAIMESMLKRNIRCISTTHYNQLKVFALTTD 464
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
NA+ EF +++L PTYR+L G G SNA I++ +G +II+ ++KL+ E +
Sbjct: 465 GVANASMEFDVDSLSPTYRLLIGVPGKSNAFEISRRLGLPNEIIEESKKLLSSENIEFE- 523
Query: 545 HRKSELYQSLMEERRKL----ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
++ QS+ ++R K+ E R L E +++E + ++L+ + + K
Sbjct: 524 ----DVLQSIDKDRTKIREYKEELEREKRDLEIE----NKKLEGKIRNLEDQREKILEKS 575
Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 660
++ ++ L AK +D ++ + N+ +D E + I+E++ + ++ R + + +
Sbjct: 576 REEAKRILLNAKENVDIILSEI-NEAKDNINSENSKKIQEAQDLLRESLKNSRNNSELEI 634
Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
+ + G++V SLG+ +ATV+E+P VLVQ G M++++ K ++ I
Sbjct: 635 KKAVNPIREIKVGDKVRT-SLGN-VATVIELPDSKGNVLVQSGIMKMKLPKESLTRID-- 690
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
QED N + + K+ +D+RG ++A ++
Sbjct: 691 --------------VQED-----TTKHNTKKILKSKATNVKSEIDIRGKNFDDAKDIVEK 731
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A + +IHG GTGV+++++ E + + ++ Q + G TV +K
Sbjct: 732 YLDDAYLSGLKSVRIIHGKGTGVLRKKLREYFKQIKIIESFKDAQYNEGGDGVTVVTLK 790
>gi|319651779|ref|ZP_08005905.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 2_A_57_CT2]
gi|317396598|gb|EFV77310.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. 2_A_57_CT2]
Length = 785
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 239/815 (29%), Positives = 380/815 (46%), Gaps = 114/815 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + AV G +LSP E+ + T+ A + + + E AE + LL
Sbjct: 65 LGGIFDIRPHVKRAVIGGMLSPQELNQISSTIHASRQMKRFIEEFAEEESS----LPILL 120
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLE----LIRAERKRNMENLDSLLKKV 156
L +LE I +D + LD ASE L +R + R E L+S+++
Sbjct: 121 GYTDKIIVLADLETSIRNAVDDNGEV-LDSASETLRSLRNQLRTKESRVRERLESMIRST 179
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+AQ + I IT R R + +K ++ GI + SSSG T F+EP V+ N
Sbjct: 180 SAQKMLSDAI----ITIRNDRFVIPVKQEYRGHY-GGIIHDQSSSGQTLFIEPASIVQLN 234
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N + E E IL L+ + A++ E++ +++ + EID FA+A +++ + P
Sbjct: 235 NELQGIRVKEQQEIERILIALSVQAAENSSELETIVEVLGEIDFMFAKARYSKRIKASKP 294
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++++ +S + +HPL+ P+ V N
Sbjct: 295 KINNEGIISLFKA------RHPLI----------------PIDEVVAN------------ 320
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
DIK+ E +VITGPNTGGKT ++KT+GL +LM++AGL +PA + F
Sbjct: 321 -------DIKLGAEYSTIVITGPNTGGKTVTLKTVGLCTLMAQAGLQIPALDGSETAVFG 373
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ ADIGD QS+EQ+LSTFS H+ IVDIL+ V SLVL DE+G+GTDP EG ALA SI
Sbjct: 374 NVYADIGDEQSIEQSLSTFSSHMVNIVDILDQVDFNSLVLFDELGAGTDPQEGAALAISI 433
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + R + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 434 LDEVYKRGARVIATTHYPELKAYGYNREGVINASVEFDIETLSPTYKLLIGVPGRSNAFE 493
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+K +G ++I+ A+ + ++ + SL E RR+ E+ A
Sbjct: 494 ISKRLGLKDQVIETARSYI-----GADTNQVENMIASLEESRRQAEADMEEANDFLKSAE 548
Query: 577 DLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
L+++++ + + ++ A H KA E + + + AK + + +++D + A+
Sbjct: 549 KLHKDLQKQMAEFYEEKDAMHEKAAE--RAEDIVEKAKAEAEEIIRDLRKMRMEKHAE-- 604
Query: 635 NSLIKESESAIAAIVEAHR------PDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLA 686
+KE E ++EA + P + ++ + F G++V V S G K
Sbjct: 605 ---VKEHE-----LIEAKKRLSEAAPQMSSAKNKLKPKNNKHVFEAGDEVKVLSFGQKGH 656
Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 746
+ +V D+ VQ G ++++V + ++ + +P P E + +
Sbjct: 657 LLEKV--SDNEWQVQIGILKMKVAERDLEYVK--------SPKP-----VETKPVATVKG 701
Query: 747 SNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVV 802
+ S LDLRG R E A +D AL R + +IHG GTG +
Sbjct: 702 KDFHVSL---------ELDLRGERYENALLRVEKYIDDALLAGYPR--VSIIHGKGTGAL 750
Query: 803 KERVLEILRNHPRVAK--YEQESPMNYGCTVAYIK 835
++ V E L+NH V K + + G TV K
Sbjct: 751 RQGVQEYLKNHRSVKKIRFGEAGEGGTGVTVVEFK 785
>gi|118586380|ref|ZP_01543830.1| DNA mismatch repair protein [Oenococcus oeni ATCC BAA-1163]
gi|118433197|gb|EAV39913.1| DNA mismatch repair protein [Oenococcus oeni ATCC BAA-1163]
Length = 795
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 227/826 (27%), Positives = 407/826 (49%), Gaps = 105/826 (12%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL+QTS AL + + + L + D+ I +L SE+ ++ +L++ ++
Sbjct: 46 LLDQTSDALLIDRRRGGLPIRKTNDLTEIFKRLKLKAVLGTSELADLKSSLQS----GQE 101
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTE---LEEKIGFCIDCKLLIILDRASEDLELI 138
+++ + D + + L ++L N LT+ L +++ +D + +LD ASE+L I
Sbjct: 102 ISDFIAMIKDEIWSEN-LRQILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHI 159
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R N+ +LL K+ A + +P+I+ R + + +K+ ++ G+ +
Sbjct: 160 RKNISTTQNNVRTLLVKMTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQ 217
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S SG T ++EP+ V+ NN L ++I E +IL ++ ++ ++K D + E+
Sbjct: 218 SQSGLTLYIEPQATVDLNNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGEL 277
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
DL A+A A M+ + P H++ + I+++ +HPLL S
Sbjct: 278 DLIQAKAKLANSMNAIKP------HLNDEKVIDLKNARHPLLASDS-------------- 317
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
V DI++ + ++ITGPNTGGKT +KTLGL LM+
Sbjct: 318 ----------------------VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMA 355
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+ G+++ A + + F+ I ADIGD QSLEQ+LSTFS H+ I +IL+ R SLVL+D
Sbjct: 356 QTGIFITAGSDSSIYVFNNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLD 415
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDP EG ALA +I++ L R L ++TTHY +L D+ NA+ EF T
Sbjct: 416 ELGAGTDPGEGAALAMAIVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTF 475
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
PTYR+L G G SNA+ I++ +GF+ I++ A+ V+ P+ Q+ + L + L+ +R
Sbjct: 476 SPTYRLLLGVPGQSNAIAISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQR 530
Query: 559 RKL---ESQARTAAS--------LHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQV 604
R L E++ R S L+ ++ + + E D +A H+ + +E++Q+
Sbjct: 531 RDLSKEENELRNQLSRAEQERKQLNQQLNEFEQNKAKEIMDAKNKANHIVSSVRQESKQL 590
Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
++ +++ + E QL+ AD+I+ L +++ +++ + F V
Sbjct: 591 LDQIRRERLKAGSSTGKNEQQLKKI-ADQIDDLHQDTSLEKNRVLKRAKSAKQFRV---- 645
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
GE+V V S T+++ + + VQ G +++ V +N++ + + K
Sbjct: 646 --------GEEVMVSSYHQS-GTIIDKISNHEWQ-VQLGILKMNVDENDLEKLSTDQEKK 695
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IAL 782
P R++ + + + S + +DLRG R E+A LD I
Sbjct: 696 INEPVHRVKNTRVFKTASKNISGH---------------IDLRGERYEQAMIDLDRYIDQ 740
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
A + + +IHG GTG +++ V ++LR+ R+ Y+ +P G
Sbjct: 741 AMLNNIDTIEIIHGKGTGALRKGVTQMLRSDRRIKHYQFANPNGAG 786
>gi|331083698|ref|ZP_08332809.1| hypothetical protein HMPREF0992_01733 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330403909|gb|EGG83461.1| hypothetical protein HMPREF0992_01733 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 792
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 242/825 (29%), Positives = 397/825 (48%), Gaps = 111/825 (13%)
Query: 16 SLEESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+L E + + +T+ ALA + Q L ++DI G L G L E+ ++ L
Sbjct: 39 NLNEIEIMQQETADALARIYQKGSLSFGGVKDIRGSLKRLEIGSTLGTGELLSLCSLLEN 98
Query: 75 VN--NVWKKLTEAAE----LDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
N + + A E LDG + LQ +PL ++ C L+E E
Sbjct: 99 TNRAKAYARRENAEEKQDSLDGMFEILQPLTPLALEIRRC-ILSEEE------------- 144
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQI--FQAGG----IDKPLITKRRSRMCV 180
I D AS L+ IR R+M+N + K+ +Q+ + +G + ++T R R C+
Sbjct: 145 IADDASAGLKQIR----RSMKNTND---KIHSQLSSYVSGSARTYLQDAVVTMRNGRYCI 197
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
+KA HK +P G+ + SS+G+T F+EP V+ NN L E AE ILS L+
Sbjct: 198 PVKAEHKGQVP-GMIHDQSSTGSTVFVEPMAIVKLNNDLRELEVKEQAEIEIILSNLSQY 256
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
A++ I+ + + ++D FARA A+ + P +++ I+++ +HPL+
Sbjct: 257 AAENLEAIEDNLKVMTQLDFIFARALLAKAQNATEPRFNTKG------IIDLKKARHPLI 310
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+ VPID+++ + ++V+TGPN
Sbjct: 311 DKHKV-----------------------------------VPIDVRLGEDFDLLVVTGPN 335
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT S+KT+GL +LM ++GL++PA ++ RL F + ADIGD QS+EQ+LSTFS H++
Sbjct: 336 TGGKTVSLKTIGLLTLMGQSGLHIPAFDNSRLSIFKEVYADIGDEQSIEQSLSTFSSHMT 395
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
+V +E R+SLVL DE+G+GTDP+EG ALA +IL +L + + TTHY++L
Sbjct: 396 NVVRFIEKADRDSLVLFDELGAGTDPTEGAALAIAILSHLHAQGIRTMATTHYSELKVYA 455
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
ENA+ EF +ETLRPTYR+L G G SNA I+ +G II +A+ E++
Sbjct: 456 LSTHGVENASCEFDVETLRPTYRLLIGIPGKSNAFAISGKLGLPSYIIDKAK---EQISQ 512
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
E + ++ +L + R+ +E++ A EI L ++E++ L++R +
Sbjct: 513 EDESFE--DVLSTLEQSRKTIEAEEAEIARYKTEIESLKTQLEEKQDKLEQRKERILRDA 570
Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFS 659
++ + L AK D ++ F +++ SA E +++ S + ++
Sbjct: 571 NEEAHRILREAKEYADQTMKIFNKAGKESMSAKE----LEQKRSELRKKMDTTGKKMALK 626
Query: 660 VSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
E S+ T + G+ V V SL K T+ P V VQ G +R +V ++++
Sbjct: 627 TPEKKKSTLTAKDISLGDAVKVLSLNVK-GTISSKPDAKGMVFVQMGILRSKVHLSDLQL 685
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
I AP L++ G+ S ++T N L G V+EA
Sbjct: 686 ID-----EPVITAPSLQR---------TGAGKIRMSKSASIRTEIN---LLGKTVDEAIA 728
Query: 777 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+LD L A + + V+HG GTG +++ V L+ V +
Sbjct: 729 ELDKYLDDAYLAHLNSVRVVHGKGTGALRKGVHNYLKRLKYVKDF 773
>gi|294793864|ref|ZP_06759001.1| MutS2 protein [Veillonella sp. 3_1_44]
gi|294455434|gb|EFG23806.1| MutS2 protein [Veillonella sp. 3_1_44]
Length = 792
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 199/701 (28%), Positives = 335/701 (47%), Gaps = 73/701 (10%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+LD AS L +R + E + + ++ + + +IT+R +R + +K +
Sbjct: 141 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 200
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 243
+ DG+ + S++G T ++EP V NN L + I EE +L + L+A + +
Sbjct: 201 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 256
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
++ ++V I+ + +A A GV ILS+ D ++N+ +HPL+
Sbjct: 257 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 307
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
P + VP +I++ R+++ITG NTGG
Sbjct: 308 -------------P-------------------PNMVVPTNIQLGTSYRILLITGSNTGG 335
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KTLGL SLM++ GL++PA + LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 336 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 395
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L +V+THY +L
Sbjct: 396 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 455
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
EN EF TL+PTYR+ G G S+AL+IA +G + I++RA + + +
Sbjct: 456 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLQKDIVERATE----YKSQFG 511
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
H E+ L E+ RK + R E + ++E E K + + AK
Sbjct: 512 SHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEKKQFNENRKQILAKAQAD 571
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ +V+ + +++ + Q + + D + S I + I+++ H P+
Sbjct: 572 AESMKRSLRVEGEAIIKQLKAQFSETNKDRLQSAINAARKGISSV---HVPEAAVDDDRK 628
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 721
+ ++ + G+ V+V SL L TV+ + G+ V + V+V ++ R N
Sbjct: 629 SLTADAIKVGQAVYVTSL-RSLGTVLSINGNRVNVDINGLTATVKVSELQSTTREEGNKL 687
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 779
+ P+ RK R GSA +E + +++ G V+EA+ +
Sbjct: 688 AREQKAAMPKTRK----RMGGSAVQRQKEV---------RTEINILGQTVDEATVSVGRF 734
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
I A + + +IHG GTG ++E V + LR P VA +E
Sbjct: 735 IDQALLGGVNQVRIIHGKGTGALREGVHQYLRTLPHVAHFE 775
>gi|365853718|ref|ZP_09393983.1| MutS2 family protein [Lactobacillus parafarraginis F0439]
gi|363711876|gb|EHL95582.1| MutS2 family protein [Lactobacillus parafarraginis F0439]
Length = 788
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 232/855 (27%), Positives = 404/855 (47%), Gaps = 114/855 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNS-AVSGQLL 60
GH +VQ Q P G Q+L A + + + + + +I+ + + L
Sbjct: 27 GHEIVQNLQ-PSGDYAVVDQQLKETADGADIVRLAGEIPIPKLTEISPYMKRLKIENAAL 85
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
S +E+ + + LRAV V + + + + R P + + + ++ ++ I
Sbjct: 86 SGTELAHITKLLRAVKTVSQFFEDFK--NEEVTLRTVP--KTVAKLTLMPDITTRMVQSI 141
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCV 180
D + LD AS L IR ++ N+ + + K + ++ + +P+IT R R +
Sbjct: 142 DDDGRV-LDSASSQLRAIRRTIEQTQSNIRTRMGKYL-KGSESKYLSEPIITVRDERFVL 199
Query: 181 GIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAE 240
I+A +K GI + S+SG T ++EP VE NN R +E E+ IL+ LT
Sbjct: 200 PIRAEYKSHF-GGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERTEQRRILAELTEM 258
Query: 241 IAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
I +E+ M+ V ++D A+A +A V P +S+++ +N+ +HPL+
Sbjct: 259 IRPYRQELLENMNLVGQLDFVNAKAKYAHQSGAVLPKISTEN------VVNLRHARHPLI 312
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+ VP DIK+ + + +++TGPN
Sbjct: 313 AKEKV-----------------------------------VPNDIKIGADYQTIIVTGPN 337
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT ++KT+GL LM ++GL++ A ++ FD + ADIGD QS+E NLSTFS H+
Sbjct: 338 TGGKTITIKTVGLLQLMGQSGLFITADEESQIGVFDDVFADIGDDQSIEANLSTFSSHMD 397
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
I+ I++ ++ +SLVL+DE+G+GTDP EG ALA +I+ + + TTHY +L
Sbjct: 398 NIIAIMKQLTDKSLVLLDELGAGTDPKEGAALAMAIIDAIHRSGCEMIATTHYPELKAFA 457
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
NA+ EF +ETLRPTYR+L G G SNALNIA +G +I+Q+A+ +
Sbjct: 458 YNRPGIINASMEFDVETLRPTYRLLLGIPGQSNALNIASRLGMPEQIVQQAKSFTD---S 514
Query: 541 ERQ--QHRKSEL---YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
E Q + +EL + +E +L ++ A LHA++ + + +++ DR H
Sbjct: 515 ENQDINNMIAELTSQTKRAHDEADELATELSEATKLHADLQKRFDQYQNQK---DRLQEH 571
Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
+ + + V++ AK D ++ D + R + +KE+E +++A
Sbjct: 572 AREQANEIVEK----AKHNADKIIADLHRKQRQVG----KTTVKENE-----LIDAKGAL 618
Query: 656 DDFSVS---------ETNTSSFTPQFGEQVHVKSLGDKLATVV--EVPGDDDTVLVQYGK 704
+ V+ + + + G++V VKS G + T++ E G D +Q G
Sbjct: 619 NQLEVAPSLKRNKVLKKEKAKHNFKAGDEVLVKSYGQQ-GTLIRQEKNGLWD---IQLGI 674
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
+++++++ ++ + P+ + Q ++ S G S +L
Sbjct: 675 LKMQIEEADLEKV-------GKQAQPKAKYQTHVSRTRSTGMS--------------PTL 713
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRG R EEA ++LD + A + +IHG GTG +++ V + L+ + RV +
Sbjct: 714 DLRGHRYEEAMYELDRYVDSALLAGYPTITIIHGKGTGALRKGVTDYLKRNSRVKSFGYS 773
Query: 823 SPM--NYGCTVAYIK 835
+P G TV K
Sbjct: 774 APNAGGDGSTVVQFK 788
>gi|386319584|ref|YP_006015747.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pseudintermedius ED99]
gi|323464755|gb|ADX76908.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus pseudintermedius ED99]
Length = 782
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 234/796 (29%), Positives = 376/796 (47%), Gaps = 111/796 (13%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L+ E+ A++ TL V N +K D +++ Y L ++ LT L + I
Sbjct: 81 GGTLNVQELNAIK-TLIQVQNQFKTFYNQLVEDEETV-NYEILDGQMQQLPVLTHLYQSI 138
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
D + L D AS +L+ IR+ + + + + L ++ + ++T R
Sbjct: 139 HQKCDTQDL--FDSASMELQSIRSRIAKTNQRVRAQLDRMVKSTSNQKKLSDAIVTVRNE 196
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R + ++A ++ +GI + S+SG T ++EP VE NN RL + E E IL+
Sbjct: 197 RNVIPVRAEYRQDF-NGIVHDQSASGQTLYIEPSAVVELNNQISRLRSEEATEVQRILAE 255
Query: 237 LTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
LTAE+A+ + ++V+ +D +A +A + G P + + V +
Sbjct: 256 LTAEVAEEAEAC-LISEQVMGHLDFLIGKARYAAKIKGTKPTFAVERQVYLPKAF----- 309
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
HPLL D V I+ E + V+
Sbjct: 310 -HPLL-----------------------------------DRDTVVANTIEFESSIQTVI 333
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KTLGL LM+++GL +P + +L FD + DIGD QS+EQ+LSTF
Sbjct: 334 ITGPNTGGKTVTLKTLGLIILMAQSGLLIPTLDGSQLSVFDNVFCDIGDEQSIEQSLSTF 393
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
S H+ IV+ILE + +SL+L DE+G+GTDPSEG ALA SIL ++ L + TTHY +
Sbjct: 394 SSHMKTIVNILEEANDKSLILFDELGAGTDPSEGAALAMSILDHVHGMGALVMATTHYPE 453
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L NA+ EF ++TL PTY++L G G SNA +I+K +G KII A+ ++
Sbjct: 454 LKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKRLGLGLKIINHAKSMI 513
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYREIEDEAKD 588
+ + +E+ SL + ++++ Q R A+ +H ++ Y + ++
Sbjct: 514 -----GQDEQEINEMIASLEKNAKRVDDQRIELDRLVREASQIHNDLSRAYEQYQNMESR 568
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
L A K K Q+V+ + A D LRD D+ + +KE E I
Sbjct: 569 LIEEA---KDKANQRVKAAMEEA--------DDILKSLRDMR-DQKGAEVKEHE----LI 612
Query: 649 VEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
+ R +D + + ++ G++V V S G K V+EV D++ V VQ G
Sbjct: 613 DQRKRLEDQYEAKSIKQNVQKQKWDEIKAGDEVKVLSYGQK-GEVLEVLSDEEAV-VQMG 670
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
+++++ P+ + ++K A P+ + +R T K
Sbjct: 671 IIKMKL------PLSDLEKKEKAKEQPKKVVTRTNR------------------STVKME 706
Query: 764 LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 821
LDLRG R +EA LD L A + +++IHG GTG +++ V + L+ H VA Y
Sbjct: 707 LDLRGYRYDEAMVALDQYLDQAVLSNYEDVYIIHGKGTGALQKGVQQHLKRHKSVATYRG 766
Query: 822 ESPM--NYGCTVAYIK 835
P +G TVA +K
Sbjct: 767 GMPSEGGFGVTVATLK 782
>gi|423417539|ref|ZP_17394628.1| MutS2 protein [Bacillus cereus BAG3X2-1]
gi|401107818|gb|EJQ15763.1| MutS2 protein [Bacillus cereus BAG3X2-1]
Length = 786
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 235/817 (28%), Positives = 385/817 (47%), Gaps = 109/817 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 ELQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREKVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLINVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + S + S LDLRG R E+A +++ L
Sbjct: 690 ---------KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A S + +IHG GTG +++ V + L+ H V Y
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|290889939|ref|ZP_06553025.1| hypothetical protein AWRIB429_0415 [Oenococcus oeni AWRIB429]
gi|419757832|ref|ZP_14284157.1| MutS family ATPase [Oenococcus oeni AWRIB304]
gi|419857503|ref|ZP_14380209.1| MutS family ATPase [Oenococcus oeni AWRIB202]
gi|421184273|ref|ZP_15641697.1| MutS family ATPase [Oenococcus oeni AWRIB318]
gi|421186067|ref|ZP_15643462.1| MutS family ATPase [Oenococcus oeni AWRIB418]
gi|421187983|ref|ZP_15645324.1| MutS family ATPase [Oenococcus oeni AWRIB419]
gi|421190064|ref|ZP_15647368.1| MutS family ATPase [Oenococcus oeni AWRIB422]
gi|421192044|ref|ZP_15649313.1| MutS family ATPase [Oenococcus oeni AWRIB548]
gi|421193207|ref|ZP_15650458.1| MutS family ATPase [Oenococcus oeni AWRIB553]
gi|421194500|ref|ZP_15651720.1| MutS family ATPase [Oenococcus oeni AWRIB568]
gi|421197349|ref|ZP_15654526.1| MutS family ATPase [Oenococcus oeni AWRIB576]
gi|290480381|gb|EFD89019.1| hypothetical protein AWRIB429_0415 [Oenococcus oeni AWRIB429]
gi|399905341|gb|EJN92784.1| MutS family ATPase [Oenococcus oeni AWRIB304]
gi|399966656|gb|EJO01176.1| MutS family ATPase [Oenococcus oeni AWRIB419]
gi|399967557|gb|EJO02030.1| MutS family ATPase [Oenococcus oeni AWRIB318]
gi|399967711|gb|EJO02177.1| MutS family ATPase [Oenococcus oeni AWRIB418]
gi|399969991|gb|EJO04297.1| MutS family ATPase [Oenococcus oeni AWRIB548]
gi|399970864|gb|EJO05154.1| MutS family ATPase [Oenococcus oeni AWRIB422]
gi|399973189|gb|EJO07375.1| MutS family ATPase [Oenococcus oeni AWRIB553]
gi|399975577|gb|EJO09628.1| MutS family ATPase [Oenococcus oeni AWRIB576]
gi|399977918|gb|EJO11889.1| MutS family ATPase [Oenococcus oeni AWRIB568]
gi|410497767|gb|EKP89236.1| MutS family ATPase [Oenococcus oeni AWRIB202]
Length = 795
Score = 265 bits (678), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 225/824 (27%), Positives = 405/824 (49%), Gaps = 101/824 (12%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL+QTS AL + + + L + D+ I +L SE+ ++ +L++ +
Sbjct: 46 LLDQTSDALLIDRRRGGLPIRKTNDLTEIFKRLKLKAVLGTSELADLKSSLQSGQEISDF 105
Query: 82 L-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ T E+ ++L++ +L ++ + L +++ +D + +LD ASE+L IR
Sbjct: 106 IATIKDEIWSENLRQ---ILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRK 161
Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
N+ +LL K+ A + +P+I+ R + + +K+ ++ G+ + S
Sbjct: 162 NISTTQNNVRTLLVKMTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQ 219
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
SG T ++EP+ V+ NN L ++I E +IL ++ ++ ++K D + E+DL
Sbjct: 220 SGLTLYIEPQATVDLNNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDL 279
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A+A A M+ + P H++ + I+++ +HPLL S
Sbjct: 280 IQAKAKLANSMNAIKP------HLNDEKVIDLKNARHPLLASDS---------------- 317
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
V DI++ + ++ITGPNTGGKT +KTLGL LM++
Sbjct: 318 --------------------VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQT 357
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
G+++ A + + F+ I ADIGD QSLEQ+LSTFS H+ I +IL+ R SLVL+DE+
Sbjct: 358 GIFITAGSDSSIYVFNNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDEL 417
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP EG ALA +I++ L R L ++TTHY +L D+ NA+ EF T P
Sbjct: 418 GAGTDPGEGAALAMAIVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSP 477
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
TYR+L G G SNA+ I++ +GF+ I++ A+ V+ P+ Q+ + L + L+ +RR
Sbjct: 478 TYRLLLGVPGQSNAIAISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRD 532
Query: 561 L---ESQARTAAS--------LHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQVQQ 606
L E++ R S L+ ++ + + E D +A H+ + +E++Q+
Sbjct: 533 LSKEENELRNQLSRAEQERKQLNQQLNEFEQNKAKEIMDAKNKANHIVSSVRQESKQLLD 592
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
++ +++ + E QL+ AD+I+ L +++ +++ + F V
Sbjct: 593 QIRRERLKAGSSTGKNEQQLKKI-ADQIDDLHQDTSLEKNRVLKRAKSAKQFRV------ 645
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
GE+V V S T+++ + + VQ G +++ V +N++ + + K
Sbjct: 646 ------GEEVMVSSYHQS-GTIIDKISNHEWQ-VQLGILKMNVDENDLEKLSTDQEKKIN 697
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALAC 784
P R++ + + + S + +DLRG R E+A LD I A
Sbjct: 698 EPVHRVKNTRVFKTASKNISGH---------------IDLRGERYEQAMIDLDRYIDQAM 742
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+ + +IHG GTG +++ V ++LR+ R+ Y+ +P G
Sbjct: 743 LNNIDTIEIIHGKGTGALRKGVTQMLRSDRRIKHYQFANPNGAG 786
>gi|169334053|ref|ZP_02861246.1| hypothetical protein ANASTE_00446 [Anaerofustis stercorihominis DSM
17244]
gi|169258770|gb|EDS72736.1| recombination and DNA strand exchange inhibitor protein
[Anaerofustis stercorihominis DSM 17244]
Length = 796
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 227/750 (30%), Positives = 378/750 (50%), Gaps = 113/750 (15%)
Query: 96 YSPLLELLKNCNFLTELEEKIG-FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 154
+ LL+ N L+ L+++I ID + I D+AS L IR RN++N ++ ++
Sbjct: 116 FDILLDYADNIEDLSFLQKEIDRVIIDSEA--ISDKASSTLYDIR----RNIKNTNNKIR 169
Query: 155 KVAAQIFQAGGIDKPL----ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
+ I + K L +T R SR V +K+ ++ + GI + S SGAT F+EP+
Sbjct: 170 EKLNSIINSKTYQKYLSENIVTIRYSRYVVPVKSEYRGEVK-GIVHDTSQSGATLFIEPE 228
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V NN L E E IL +L+ +I ++ + + +L +D+ A++ F+
Sbjct: 229 AIVNLNNKLKELEVEEQKEIEVILRILSNKIKENASNLNVNENILLYLDVLNAKSRFSIK 288
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
D P +SS D I ++ +HPL+ EM
Sbjct: 289 NDYHKPKISS------DEEIVLKSARHPLI-------------------------EMNKA 317
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VP +I ++ + R ++ITGPNTGGKT ++KT+GL SL+ ++GL++PA +
Sbjct: 318 ----------VPSNIILDKDHRALIITGPNTGGKTVTLKTVGLCSLLFQSGLFIPANDGS 367
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
RLP ++ I ADIGD+QS+ Q+LSTFSGH++ IVDI+ + ++LVL+DE+ GTDP+EG
Sbjct: 368 RLPIYEKIFADIGDNQSIAQSLSTFSGHMTNIVDIVNSANDKTLVLLDELCVGTDPTEGS 427
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
++A SI+ L++ TTHY+++ NA+ EF +ETL PTYR++ G G
Sbjct: 428 SIAISIIDNLKNIGARIFSTTHYSEIKEYAIVKKNVMNASVEFDVETLSPTYRLILGIPG 487
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEERRKLESQARTAA 569
SNA I+K +G II+ A+K + + +R+ E L + L E+ K+E +
Sbjct: 488 KSNAFEISKKLGLKDSIIRDAKKYL------TEDNREVEDLIKELNEKAVKVEEEKTQID 541
Query: 570 SLHAEIMDLYREIEDEAKDLDRRA------AHLKAK--------ETQQVQQELNFAKVQI 615
L E +L +E E ++ A LKAK +++++ LN K+ I
Sbjct: 542 RLLRENKELNERLESEKAYIEENKSKIMMEASLKAKDIIAAAKRDSKELINRLN--KINI 599
Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--G 673
V + ++ A+ I IKE E + + + +H E N + F G
Sbjct: 600 PKNVNANNTKFKE-EAENIKKQIKEKEELLNSYIPSHELK-----KEGNNKNRKEDFKVG 653
Query: 674 EQVHVKSLGDKLATVVEVPGDDD--TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
E+V++KSL D+ A+++ G D+ V +Q G ++ ++ PI + N
Sbjct: 654 EEVYIKSL-DQYASIL---GFDNKSNVFIQAGIIKTKI------PISKIEHSN------- 696
Query: 732 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRS 789
K++E + + SN +A +T S+D+RGM ++A +++ L A +
Sbjct: 697 --KEKEHIKKTAVKFSNTKA------KTIDTSIDIRGMYSDDAILKVEKYLDDAYLANLK 748
Query: 790 VLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
++ +IHG GTGV+K V ++L++H V KY
Sbjct: 749 MVTIIHGKGTGVLKNAVQDLLKHHSYVKKY 778
>gi|206969500|ref|ZP_03230454.1| MutS2 family protein [Bacillus cereus AH1134]
gi|229072054|ref|ZP_04205263.1| hypothetical protein bcere0025_42200 [Bacillus cereus F65185]
gi|229081805|ref|ZP_04214297.1| hypothetical protein bcere0023_44330 [Bacillus cereus Rock4-2]
gi|229180871|ref|ZP_04308206.1| hypothetical protein bcere0005_42150 [Bacillus cereus 172560W]
gi|229192752|ref|ZP_04319710.1| hypothetical protein bcere0002_44030 [Bacillus cereus ATCC 10876]
gi|365158667|ref|ZP_09354859.1| MutS2 protein [Bacillus sp. 7_6_55CFAA_CT2]
gi|206735188|gb|EDZ52356.1| MutS2 family protein [Bacillus cereus AH1134]
gi|228590591|gb|EEK48452.1| hypothetical protein bcere0002_44030 [Bacillus cereus ATCC 10876]
gi|228602428|gb|EEK59914.1| hypothetical protein bcere0005_42150 [Bacillus cereus 172560W]
gi|228701393|gb|EEL53887.1| hypothetical protein bcere0023_44330 [Bacillus cereus Rock4-2]
gi|228710988|gb|EEL62954.1| hypothetical protein bcere0025_42200 [Bacillus cereus F65185]
gi|363626540|gb|EHL77523.1| MutS2 protein [Bacillus sp. 7_6_55CFAA_CT2]
Length = 786
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 240/837 (28%), Positives = 396/837 (47%), Gaps = 115/837 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEVERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
L E ++ E A +L + L+RE++ + + DR LKA+ ++ ++++ A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583
Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
K + + ++Q+ QLR A + + LI+ E A +V+ + N
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633
Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-- 689
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 -----------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYL 729
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 730 DDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|402838646|ref|ZP_10887149.1| MutS2 family protein [Eubacteriaceae bacterium OBRC8]
gi|402272206|gb|EJU21427.1| MutS2 family protein [Eubacteriaceae bacterium OBRC8]
Length = 785
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 212/729 (29%), Positives = 349/729 (47%), Gaps = 105/729 (14%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS DL IR + +N+ + L ++ + + + ++T R R V +K+ +
Sbjct: 142 ISDDASADLRRIRRQINSEKQNIKNKLNEIVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ P GI + SSSGAT F+EP V NN L E E IL+ LT+ + +
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+I + D + ++D A+ + M+ + P ++ + ++ ++ +HPL+
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K V +S + +G E ++ITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL SLM +AGL++P + FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ V SLVL DE+G+GTDP EG LA SIL+ L+ + L V TTHY++L
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILETLKSKNILTVATTHYSELKNYALTQENV 459
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LV 535
NA+ EF + TL PTY++L G G SNA I+K +G +II A++ ++
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIKTDSIQMEDVI 519
Query: 536 ERLRPERQQH-RKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
+L R + +K E Q +E+ R KLE++ + + ++ IED AK+
Sbjct: 520 SKLEKIRTDYEKKQEELQKELEDVKYIRLKLENKEQRQKEQNKKL------IED-AKEKA 572
Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 650
R+ E + + LN K++ + ++ + Q+ + + K ++S I +
Sbjct: 573 RKLIEDAKSEADIISKNLN--KIKNSSDYKNIDRQMNELKTNINKYKEKYAKSKEELIAK 630
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
+ +P ++ +V G+ V+V S K A V+ V D VL++ G +++ VK
Sbjct: 631 SSKPLENINV------------GDIVYVNSFA-KNAKVLSVDDAKDEVLIELGAIKMTVK 677
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
K N+ K K + L + +T++ S+DLRGM
Sbjct: 678 KENLSTQEKIKEKKSTKAGKILTN---------------------KTKTAQTSVDLRGMD 716
Query: 771 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMN 826
+E A ++D I + S + +IHG+GT V+K+ + L+ H + + Q
Sbjct: 717 LETAILEVDKYIDNSYLGGLSEVTIIHGVGTLVLKKGIQSYLKKHKHIKSFRDGQYGEGG 776
Query: 827 YGCTVAYIK 835
G TVA +K
Sbjct: 777 MGVTVATLK 785
>gi|423640379|ref|ZP_17615997.1| MutS2 protein [Bacillus cereus VD166]
gi|401281295|gb|EJR87208.1| MutS2 protein [Bacillus cereus VD166]
Length = 786
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 240/837 (28%), Positives = 396/837 (47%), Gaps = 115/837 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
L E ++ E A +L + L+RE++ + + DR LKA+ ++ ++++ A
Sbjct: 526 LEESQKNAERDWNEAETLRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583
Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
K + + ++Q+ QLR A + + LI+ E A +V+ + N
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633
Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-- 689
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 -----------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYL 729
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 730 DDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|228954821|ref|ZP_04116841.1| hypothetical protein bthur0006_41880 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|229112016|ref|ZP_04241559.1| hypothetical protein bcere0018_42590 [Bacillus cereus Rock1-15]
gi|423426676|ref|ZP_17403707.1| MutS2 protein [Bacillus cereus BAG3X2-2]
gi|423437985|ref|ZP_17414966.1| MutS2 protein [Bacillus cereus BAG4X12-1]
gi|423502774|ref|ZP_17479366.1| MutS2 protein [Bacillus cereus HD73]
gi|449091504|ref|YP_007423945.1| hypothetical protein HD73_4846 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228671339|gb|EEL26640.1| hypothetical protein bcere0018_42590 [Bacillus cereus Rock1-15]
gi|228804810|gb|EEM51409.1| hypothetical protein bthur0006_41880 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401110242|gb|EJQ18151.1| MutS2 protein [Bacillus cereus BAG3X2-2]
gi|401119598|gb|EJQ27409.1| MutS2 protein [Bacillus cereus BAG4X12-1]
gi|402460013|gb|EJV91741.1| MutS2 protein [Bacillus cereus HD73]
gi|449025261|gb|AGE80424.1| hypothetical protein HD73_4846 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 786
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 240/837 (28%), Positives = 396/837 (47%), Gaps = 115/837 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
L E ++ E A +L + L+RE++ + + DR LKA+ ++ ++++ A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583
Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
K + + ++Q+ QLR A + + LI+ E A +V+ + N
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633
Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-- 689
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 -----------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYL 729
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 730 DDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|404369300|ref|ZP_10974641.1| MutS2 protein [Fusobacterium ulcerans ATCC 49185]
gi|313690687|gb|EFS27522.1| MutS2 protein [Fusobacterium ulcerans ATCC 49185]
Length = 778
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 239/827 (28%), Positives = 396/827 (47%), Gaps = 141/827 (17%)
Query: 39 LDLSTIEDIAGILN-SAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
L+ + ++DI + S + G L ++ + LR V+K E L +Y
Sbjct: 63 LETAGMKDICKLTKKSQLIGTYLDVEDLWDINHNLRLFR-VFKNRLE-------DLNKYK 114
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL----DSLL 153
L + + L +E+ I ID I D AS DL IR +K N+ D L
Sbjct: 115 DLRDKFNDVPILRGIEDIINKAIDNNKEI-KDDASLDLRDIRIHKKTLAMNIKRKFDELF 173
Query: 154 KKVA-AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
+ A++FQ + +IT+R R V +KA K + GI + SSSG T F+EP
Sbjct: 174 NEPQFAKVFQ-----EKIITERDGRSVVPVKADFKGQIK-GIEHDRSSSGQTVFIEPLSI 227
Query: 213 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
V NN L E E IL +T I S+ +I + + V+ +D+ ARA +
Sbjct: 228 VALNNKNRELEIKEKEEIRKILLRITDYIRNSKDDIDRVGEAVITLDILNARAMYGIEKK 287
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
V P ++++ ++ + +HP + SS+
Sbjct: 288 CVVPNINNREILTLVDA------RHPFIPVSSV--------------------------- 314
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
VP+ ++ + ++ITGPNTGGKT ++KT GL +LM+ +G+ +PA H +
Sbjct: 315 --------VPLTFEIGKDYNTLLITGPNTGGKTVALKTAGLLTLMALSGIPIPAHEHSSI 366
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
+F + ADIGD QS+EQ+LS+FS H+ + +ILE V+R SLVL+DE+GSGTDP+EG A
Sbjct: 367 GFFTGVYADIGDEQSIEQSLSSFSAHLKNVQEILENVTRASLVLLDELGSGTDPAEGSAF 426
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
A +++ YL+D+ +++TTHY+++ + E A+ EF++ETL PTYR+L G G+S
Sbjct: 427 AMAVIDYLKDKKCKSIITTHYSEVKAHGYNEEGIETASMEFNVETLSPTYRLLIGIPGES 486
Query: 513 NALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ----HRKSE-LYQSLME 556
NAL IA+ +G ++I +A +K++ ++ + + R+ E L ++
Sbjct: 487 NALTIARRLGVSEEVINKAKSYISDDNKKIEKMISNIKDKADELDIMKRQVEFLKEAAQR 546
Query: 557 ERRKLESQARTAASLHAEIMDLYREIEDEA----KDLDRRAAHLKAKETQQVQQELNFAK 612
++ E + R L E D+ +E ++A K++ +AA L +++Q+E N K
Sbjct: 547 DKEAFEEKLRV---LEKEKNDILKEAYEKADRMMKEMQSKAAAL----VEKIQKEDN-KK 598
Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
I V + N LR A D+ + E + DF V
Sbjct: 599 EDIKNVQKSL-NMLRSALQDDKTKTVAEKPKVARKV--------DFKV------------ 637
Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 732
GE++ V SL ++ A V+++ +TV VQ G +++ V ++++ + K+K N
Sbjct: 638 GERLFVNSL-NQFANVLKINLSKETVQVQAGILKLEVSLDDVKVVEEKKQK-VYN----- 690
Query: 733 RKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSV 790
S+ + ++ +DLRG V+EA ++L+ L A S +
Sbjct: 691 -------------------SFSHKKTAVRSEIDLRGKMVDEAVYELETYLDRAVMNSYNE 731
Query: 791 LFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
++VIHG GTG ++E +L L+ P V +Y GCTV +K
Sbjct: 732 VYVIHGKGTGALREGILNYLKKCPYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|421730736|ref|ZP_16169862.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|407074890|gb|EKE47877.1| recombination and DNA strand exchange inhibitor protein [Bacillus
amyloliquefaciens subsp. plantarum M27]
Length = 785
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 240/836 (28%), Positives = 399/836 (47%), Gaps = 107/836 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LADIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELL-KNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHGEELITLGNLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ M P ++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAMKATKPFMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I++ +G II +A+ + +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521
Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL---KAKETQQVQQ 606
SL + +++ + + SL E L++E++ + +L+ + + ++ + +
Sbjct: 522 MIASLEKSKKRADEELSETESLRKEAEKLHKELQQQIIELNAQKDKMMEEAERKAAEKLE 581
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
QI ++ + + R E+ K A+ A ++ +P+
Sbjct: 582 AAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPER----KTEKKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K A ++E G+ + VQ G ++++VK+ ++ + ++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P P+ K A ++ + Y ++ LDLRG R E A ++ D
Sbjct: 688 -PEPKKEK---------AITAVKGKDYHVSLE-----LDLRGERYENALSRVEKYLDDAV 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L+NH V +++ + G T+ +K
Sbjct: 733 LAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK 785
>gi|116490536|ref|YP_810080.1| MutS family ATPase [Oenococcus oeni PSU-1]
gi|116091261|gb|ABJ56415.1| MutS family ATPase [Oenococcus oeni PSU-1]
Length = 795
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 225/824 (27%), Positives = 405/824 (49%), Gaps = 101/824 (12%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL+QTS AL + + + L + D+ I +L SE+ ++ +L++ +
Sbjct: 46 LLDQTSDALLIDRRRGGLPIRKTNDLTEIFKRLKLKAVLGTSELADLKSSLQSGQEISDF 105
Query: 82 L-TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRA 140
+ T E+ ++L++ +L ++ + L +++ +D + +LD ASE+L IR
Sbjct: 106 IATIKDEIWSENLRQ---ILFIINRLTDFSVLAKRLALTVDDQG-TVLDTASEELAHIRK 161
Query: 141 ERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSS 200
N+ +LL K+ A + +P+I+ R + + +K+ ++ G+ + S
Sbjct: 162 NISTTQNNVRTLLVKMTKG-HDAKYLSEPIISTRDGILVLPVKSENRKHFG-GVVHDQSQ 219
Query: 201 SGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDL 260
SG T ++EP+ V+ NN L ++I E +IL ++ ++ ++K D + E+DL
Sbjct: 220 SGLTLYIEPQATVDLNNHLHELEMAQIREINSILIDISQQLFPFYEQLKLNDDLIGELDL 279
Query: 261 AFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKS 320
A+A A M+ + P H++ + I+++ +HPLL S
Sbjct: 280 IQAKAKLANSMNAIKP------HLNDEKVIDLKNARHPLLASDS---------------- 317
Query: 321 DVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA 380
V DI++ + ++ITGPNTGGKT +KTLGL LM++
Sbjct: 318 --------------------VANDIQLGRDHISLIITGPNTGGKTVLIKTLGLELLMAQT 357
Query: 381 GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEI 440
G+++ A + + F+ I ADIGD QSLEQ+LSTFS H+ I +IL+ R SLVL+DE+
Sbjct: 358 GIFITAGSDSSIYVFNNIFADIGDEQSLEQSLSTFSSHMENIKNILQQADRNSLVLLDEL 417
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP EG ALA +I++ L R L ++TTHY +L D+ NA+ EF T P
Sbjct: 418 GAGTDPGEGAALAMAIVESLSKRTILNLITTHYPELKVFADQKDFAINASMEFDPRTFSP 477
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
TYR+L G G SNA+ I++ +GF+ I++ A+ V+ P+ Q+ + L + L+ +RR
Sbjct: 478 TYRLLLGVPGQSNAIAISRRLGFNEDILRLAESYVD---PQNQE--LNNLIKGLVAQRRD 532
Query: 561 L---ESQARTAAS--------LHAEIMDLYREIEDEAKDLDRRAAHLKA---KETQQVQQ 606
L E++ R S L+ ++ + + E D +A H+ + +E++Q+
Sbjct: 533 LSKEENELRNQLSRAEQERKQLNQQLNEFEQNKAKEIMDAKNKANHIVSSVRQESKQLLD 592
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
++ +++ + E QL+ AD+I+ L +++ +++ + F V
Sbjct: 593 QIRRERLKAGSSTGKNEQQLKKI-ADQIDDLHQDTSLEKNRVLKRAKSAKQFRV------ 645
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
GE+V V S T+++ + + VQ G +++ V +N++ + + K
Sbjct: 646 ------GEEVMVSSYHQS-GTIIDKISNHEWQ-VQLGILKMNVDENDLEKLSTDQEKKIN 697
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALAC 784
P R++ + + + S + +DLRG R E+A LD I A
Sbjct: 698 EPIHRVKNTRVFKTASKNISGH---------------IDLRGERYEQAMIDLDRYIDQAM 742
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+ + +IHG GTG +++ V ++LR+ R+ Y+ +P G
Sbjct: 743 LNNIDTIEIIHGKGTGALRKGVTQMLRSDRRIKHYQFANPNGAG 786
>gi|332798676|ref|YP_004460175.1| MutS2 protein [Tepidanaerobacter acetatoxydans Re1]
gi|332696411|gb|AEE90868.1| MutS2 protein [Tepidanaerobacter acetatoxydans Re1]
Length = 787
Score = 265 bits (677), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 228/823 (27%), Positives = 402/823 (48%), Gaps = 124/823 (15%)
Query: 23 LLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA---VNNV 78
L +TS LA++ S + L I+DI LN A G +LSP E+ + T+RA + +
Sbjct: 46 LQRETSEGLALLNSGIKISLRGIKDIRNSLNLAKLGSVLSPGELLDIASTMRAARLIKSA 105
Query: 79 WKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLE 136
W + A DS+ + E++ + LEEKI I D + I D AS L
Sbjct: 106 WNEKKPA-----DSV----IINEIVNGLHIFQSLEEKIEKAIVSDEE---IADNASPKLS 153
Query: 137 LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIAL 196
IR ++K +++ + L ++ + + + P++T R+ R V +K + + G+
Sbjct: 154 SIRRQKKNLAQSIRNKLNEIISSPYYQKALQDPIVTVRQDRYVVPVKQEFRGSI-QGVIH 212
Query: 197 NVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL 256
+ S+SGAT ++EP ++ NN +L E E IL + ++ ++ I + +
Sbjct: 213 DQSASGATLYIEPMAVMQMNNELRQLEIEEKKEIERILWDFSKKVQENYDFIHDTLYGLA 272
Query: 257 EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSN 316
+D A+AG++ + G PI +++ +++ I+G +HPLL G
Sbjct: 273 HLDFIMAKAGYSLDIKGTEPIFNNRGYINI-----IQG-RHPLLKGEV------------ 314
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
VP+D+ + E +++ITGPNTGGKT ++KT+GL L
Sbjct: 315 ------------------------VPLDVYLGDEFNILIITGPNTGGKTVALKTVGLFIL 350
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M+++GL+LPA+ + F+ + ADIGD QS+EQ+LSTFS H+ I +IL+L +++SL++
Sbjct: 351 MAQSGLHLPAQEGTEVSIFEDVFADIGDEQSIEQSLSTFSSHMKNIKEILDLATKDSLII 410
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DE+G+GTDP+EG ALA +IL YL ++ + TTHY++L ENA+ EF ++
Sbjct: 411 LDELGAGTDPTEGAALAMAILNYLYEKGSRVLATTHYSELKTFAFSKEGVENASMEFDIQ 470
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSL 554
TL PTYR+ G G SNA IAK +G ++++ + L+ E L+ E +L +
Sbjct: 471 TLSPTYRLTIGIPGKSNAFEIAKRLGLKQEVVDLGKSLMAEESLKLE-------DLLTHI 523
Query: 555 MEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV- 613
++ K E + +L E + +E+E + L R K E +++ L +
Sbjct: 524 ELQKNKAEEEREELRALKTEYLKKIDRLEEEQQKL--RIQQEKIVEKAKMKARLLLDNIE 581
Query: 614 ----QIDTVVQDFENQ----LRDASADEINSLIKESESAI-----AAIVEAHRPDDDFSV 660
QI ++D E + +R+ + ++ S +++++ + A I+ A
Sbjct: 582 REAAQIIESLKDAETENQIHIRNKAVEQARSWLRKTDEKLQDSKNALIINA--------- 632
Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
++ P G +V + L + ++ + + VQ G M+V V ++ PI
Sbjct: 633 AKKYKKPLKP--GLKVKIAGLNQE-GYILSLDEALKSAQVQVGIMKVNVPAESLIPIEQI 689
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SH 776
+ ++++ R S A S +E S +DLRG+ V+EA +
Sbjct: 690 E-----------FEEEKSRYSSIAMSKAKEIS---------TEIDLRGLTVDEALAEVDN 729
Query: 777 QLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
LD A+ +R L IHG GTG +++ + ++L+ + +
Sbjct: 730 YLDDAMMAGVARVTL--IHGKGTGALRQGITDMLKTRSDIKAF 770
>gi|423673678|ref|ZP_17648617.1| MutS2 protein [Bacillus cereus VDM062]
gi|401310543|gb|EJS15859.1| MutS2 protein [Bacillus cereus VDM062]
Length = 786
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 237/794 (29%), Positives = 380/794 (47%), Gaps = 105/794 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
I+K +G ++I RA+ + + + E + E ++ ER++ E + + LH
Sbjct: 493 EISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEHRKQSEKLHR 552
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E+ E DE R LKA+ ++ ++++ AK + + ++Q+ QLR A
Sbjct: 553 ELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKQEAEGIIQEL-RQLRKAQLIN 604
Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLAT 687
+ + LI+ E A +V+ + V NT+ + G++V V + G K
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQK------VHVKNTAPKQQLRSGDEVKVLTFGQKGQL 658
Query: 688 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 747
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 659 LEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGR 703
Query: 748 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKER 805
+ S LDLRG R E+A +++ L A S + +IHG GTG +++
Sbjct: 704 DYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQG 754
Query: 806 VLEILRNHPRVAKY 819
V + L+ H V Y
Sbjct: 755 VQDYLKKHRGVKTY 768
>gi|229093646|ref|ZP_04224746.1| hypothetical protein bcere0021_43700 [Bacillus cereus Rock3-42]
gi|228689733|gb|EEL43540.1| hypothetical protein bcere0021_43700 [Bacillus cereus Rock3-42]
Length = 786
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 237/835 (28%), Positives = 392/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|363893691|ref|ZP_09320786.1| hypothetical protein HMPREF9629_01112 [Eubacteriaceae bacterium
ACC19a]
gi|361963493|gb|EHL16565.1| hypothetical protein HMPREF9629_01112 [Eubacteriaceae bacterium
ACC19a]
Length = 785
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 212/731 (29%), Positives = 349/731 (47%), Gaps = 109/731 (14%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS DL IR + +N+ + L + + + + ++T R R V +K+ +
Sbjct: 142 ISDDASADLRRIRRQINSEKQNIKNKLNEFVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ P GI + SSSGAT F+EP V NN L E E IL+ LT+ + +
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+I + D + ++D A+ + M+ + P ++ + ++ ++ +HPL+
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K V +S + +G E ++ITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL SLM +AGL++P + FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ V SLVL DE+G+GTDP EG LA SIL+ L+ + L V TTHY++L
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILEKLKSKNILTVATTHYSELKNYALTQENV 459
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV----------- 535
NA+ EF + TL PTY++L G G SNA I+K +G +II A++ +
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIKTDSIQMEDVI 519
Query: 536 ---ERLRPERQQHRKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKD 588
E++R + + +K E Q +E+ R KLE++ + + ++ IED AK+
Sbjct: 520 SKLEKIRTDYE--KKQEELQKELEDVKYIRLKLENKEQRQKEQNKKL------IED-AKE 570
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
R+ E + + LN K++ + ++ + Q+ + + K ++S I
Sbjct: 571 KARKLIEDAKSEADIISKNLN--KIKNSSDYKNIDRQMNELKTNINKYKEKYAKSKEELI 628
Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
++ +P ++ +V G+ V+V S K A V+ V D VL++ G +++
Sbjct: 629 AKSSKPLENINV------------GDIVYVNSFA-KNAKVLSVDDAKDEVLIELGAIKMT 675
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
VKK N+ K K + L + +T++ S+DLRG
Sbjct: 676 VKKENLSTQEKIKEKKSTKAGKILTN---------------------KTKTAQTSVDLRG 714
Query: 769 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESP 824
M +E A ++D I + S + +IHG+GT V+K+ + L+ H + + Q
Sbjct: 715 MDLETAILEVDKYIDNSYLAGLSEVTIIHGVGTLVLKKGIQSYLKKHKHIKSFRDGQYGE 774
Query: 825 MNYGCTVAYIK 835
G TVA +K
Sbjct: 775 GGMGVTVATLK 785
>gi|229019772|ref|ZP_04176575.1| hypothetical protein bcere0030_42720 [Bacillus cereus AH1273]
gi|229025999|ref|ZP_04182383.1| hypothetical protein bcere0029_42850 [Bacillus cereus AH1272]
gi|228735280|gb|EEL85891.1| hypothetical protein bcere0029_42850 [Bacillus cereus AH1272]
gi|228741497|gb|EEL91694.1| hypothetical protein bcere0030_42720 [Bacillus cereus AH1273]
Length = 786
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 237/823 (28%), Positives = 389/823 (47%), Gaps = 110/823 (13%)
Query: 13 FGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
FG+ + E Q ++ + + + S PL I DI + A G +LSP+E+ + T+
Sbjct: 40 FGE-IVELQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTM 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRA 131
N+ K+ E +G L P+LE + L +LE+KI CI ++ D A
Sbjct: 97 YGSRNM-KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSA 150
Query: 132 SEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S+ L IR + R E L+++ + AQ + I +T R R + +K ++
Sbjct: 151 SDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+ GI + S+SG T F+EP+ VE NN E E IL +LT E+A
Sbjct: 207 GVY-GGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADI 265
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ ++ V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 266 VLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------- 312
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+P + VP +I + + +VITGPNTGGKT +
Sbjct: 313 --------DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVT 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+G+ LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE
Sbjct: 345 LKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILE 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
ESLVL DE+G+GTDP EG ALA SIL + +R V TTHY +L +
Sbjct: 405 KADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVI 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF + TL PTY++L G G SNA I+K +G ++I +A+ + ++
Sbjct: 465 NASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKI 519
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+ L E ++ E A +L + L+RE++ + + + K ++ +++
Sbjct: 520 ENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKVQKEGEEK 579
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSE 662
+ AK + + ++Q+ QLR A + + LI+ E A +V+ +
Sbjct: 580 VEAAKKEAEGIIQEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK--------- 629
Query: 663 TNTSSFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
N + P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 630 VNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYIN 687
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
KQ E + S + S LDLRG R E+A ++
Sbjct: 688 TP-------------KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRV 725
Query: 779 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ L A S + +IHG GTG +++ V + L+ H V Y
Sbjct: 726 EKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|386715018|ref|YP_006181341.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
gi|384074574|emb|CCG46067.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
Length = 781
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 235/805 (29%), Positives = 382/805 (47%), Gaps = 111/805 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI L G +LS E V T+ + + + EA E + L+
Sbjct: 65 LGGIFDIKPSLKRTTIGGILSALESLDVASTIYGGRQLKRFIEEAEEPEMPKLR------ 118
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLKK 155
E++ L ELE+ I CID + ++D AS+ L IR+ R R E+ +DS K
Sbjct: 119 EIVTGILPLKELEQSIRSCID-EHGNVMDGASDKLRTIRS-RVRTYESRVRDKMDSFTKS 176
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
+ A ++T R R + +K ++ + GI + SSSGAT F+EP+ V+
Sbjct: 177 KTKMLSDA------IVTIRNERYVLPVKQEYRGAI-GGIVHDQSSSGATLFIEPQSVVDL 229
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL L+ EIA + + R+ +D FARA + M
Sbjct: 230 NNQLQEARVQEKHEIEKILKELSEEIADHYSALYENVTRLGHVDFMFARAKLGKQMKASM 289
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P ++ + + + +HPL+ N E V
Sbjct: 290 PSMNDEGRIKMLQA------RHPLI-----------------------NEEEVV------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
P DI++ + +VITGPNTGGKT ++K +GL +LM+++GL +PA + + F
Sbjct: 315 ------PNDIEIGEDYTSIVITGPNTGGKTVTLKLVGLCTLMAQSGLQIPALDGCEMAVF 368
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + ADIGD QS+EQ+LSTFS H++ IVDIL+ V ++LVL DE+G+GTDP EG ALA S
Sbjct: 369 EEVYADIGDEQSIEQSLSTFSSHMTNIVDILKHVDDKTLVLFDELGAGTDPQEGAALAMS 428
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R + TTHY +L NA+ EF ++TL+PTYR+L G G SNA
Sbjct: 429 ILDEVVNRNARVIATTHYPELKAYGYNREGVINASVEFDIQTLKPTYRLLIGVPGRSNAF 488
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I++ +G +I AQ E++ + Q + SL E +R E A L E
Sbjct: 489 EISRKLGLHESVITSAQ---EKIGVDSQS--VENMIASLEESKRGAEQDYEEAERLLQEA 543
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ-----LRDAS 630
DL E++++ +++ L K ++ ++ + A+ + +T+V + N +++
Sbjct: 544 QDLRNELKNKWDQFEQKREELYEKAEEKAEKAIRQAREEAETIVGEIRNMKSQAGMKEHE 603
Query: 631 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVE 690
E + E++ +A + +P+ V E + G++V + +L ++ T+VE
Sbjct: 604 WIEARKMFDEAQPELAKKKKESKPEPQKEVKELKS-------GDEVKLLTL-NQNGTIVE 655
Query: 691 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 750
G ++ VQ G M+V+ K+ ++ I +++ P ++ +
Sbjct: 656 QTGKNE-YQVQVGVMKVKAKRKDLEFI-KAEQPYKEKPMATVKGK--------------- 698
Query: 751 ASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKER 805
G V+T LDLRG R E+A ++L D LA + + S +IHG GTG ++
Sbjct: 699 ---GYHVKT---ELDLRGERYEDALNRLEKYIDDALLAGYPTVS---IIHGKGTGALRTA 749
Query: 806 VLEILRNHPRVAKYEQESPMNYGCT 830
V +NH + + + MN G +
Sbjct: 750 VQNYAKNHRNITNH-RAGGMNEGGS 773
>gi|423411664|ref|ZP_17388784.1| MutS2 protein [Bacillus cereus BAG3O-2]
gi|423432549|ref|ZP_17409553.1| MutS2 protein [Bacillus cereus BAG4O-1]
gi|401104989|gb|EJQ12957.1| MutS2 protein [Bacillus cereus BAG3O-2]
gi|401115682|gb|EJQ23529.1| MutS2 protein [Bacillus cereus BAG4O-1]
Length = 786
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 240/837 (28%), Positives = 396/837 (47%), Gaps = 115/837 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEVERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHIST-----DTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
L E ++ E A +L + L+RE++ + + DR LKA+ ++ ++++ A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583
Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
K + + ++Q+ QLR A + + LI+ E A +V+ + N
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633
Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ P+ G++V V + G K + +V D VQ G ++++VK++N+ I K
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTPK- 690
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
Q E + + + S LDLRG R E A +++ L
Sbjct: 691 ------------QTEKKAVATVKGRDYYVSL---------ELDLRGERFENAMARVEKYL 729
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 730 DDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|423389147|ref|ZP_17366373.1| MutS2 protein [Bacillus cereus BAG1X1-3]
gi|401642422|gb|EJS60133.1| MutS2 protein [Bacillus cereus BAG1X1-3]
Length = 786
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 235/817 (28%), Positives = 385/817 (47%), Gaps = 109/817 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 ELQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + S + S LDLRG R E+A +++ L
Sbjct: 690 ---------KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A S + +IHG GTG +++ V + L+ H V Y
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|423470753|ref|ZP_17447497.1| MutS2 protein [Bacillus cereus BAG6O-2]
gi|402434491|gb|EJV66529.1| MutS2 protein [Bacillus cereus BAG6O-2]
Length = 786
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 237/796 (29%), Positives = 381/796 (47%), Gaps = 109/796 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
I+K +G ++I RA+ + + + E + E ++ ER++ E + + LH
Sbjct: 493 EISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEYRKQSEKLHR 552
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 553 ELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVN 604
Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLGDKL 685
+ + LI+ E A +V+ + V+ NT+ P G++V V + G K
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQK------VNVKNTAPKQQLRP--GDEVKVLTFGQKG 656
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLKKV--SDTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 804 ERVLEILRNHPRVAKY 819
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKNY 768
>gi|375363272|ref|YP_005131311.1| MutS2 protein [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
gi|371569266|emb|CCF06116.1| MutS2 protein [Bacillus amyloliquefaciens subsp. plantarum CAU
B946]
Length = 785
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 239/836 (28%), Positives = 400/836 (47%), Gaps = 107/836 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L + QK L++ A A+M+ + + DI L A G +L+P+E + L AV
Sbjct: 40 LADIQKQLDEVEEASAVMRLRGHAPFGGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ +++ E DG + PL++ + L +LE +I CID + LD AS
Sbjct: 100 KQMKHFISQMTE-DGVGI----PLIQAHAEELITLGDLEREINSCIDDHGEV-LDHASPA 153
Query: 135 LELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 154 LRGIRTQLRTLESRVRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSSY 209
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ +EI
Sbjct: 210 -GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEHTAEHTQEIAQ 268
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
++ + +D FA+A +A+ + P ++ D I ++ +HPLL
Sbjct: 269 NVEVLQTLDFIFAKARYAKAIKATKPFMNG------DGFIRLKKARHPLL---------- 312
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
P V N DI++ + +VITGPNTGGKT ++KT
Sbjct: 313 ------PQDQVVAN-------------------DIELGGDYSTIVITGPNTGGKTVTLKT 347
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGL ++M++AGL++PA FD + ADIGD QS+EQ+LSTFS H+ IV+IL+ VS
Sbjct: 348 LGLLTIMAQAGLHIPADEGSEAAVFDNVFADIGDEQSIEQSLSTFSSHMVNIVNILKDVS 407
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA+
Sbjct: 408 ENSLVLFDELGAGTDPQEGAALAMSILDEVHRTNARVLATTHYPELKAYGYNRQGVMNAS 467
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL PTY++L G G SNA I++ +G II +A+ + +H + +L
Sbjct: 468 VEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM------TAEHNEVDL 521
Query: 551 Y-QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL---KAKETQQVQQ 606
SL + +++ + + SL E L++E++ + +L+ + + ++ + +
Sbjct: 522 MIASLEKSKKRADEELSETESLRKEAEKLHKELQQQIIELNAQKDKMMEEAERKAAEKLE 581
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
QI ++ + + R E+ K A+ A ++ +P+
Sbjct: 582 AAANEAEQIIRELRSIKQEHRSFKEHELIDAKKRLGDAMPAFEKSKQPER----KTEKKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K A ++E G+ + VQ G ++++VK+ ++ + ++
Sbjct: 638 ELKP--GDEVKVLTFGQKGA-LLEKTGEKEWN-VQIGILKMKVKEKDLEFLKSA------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P P+ K A ++ + Y ++ LDLRG R E A ++ D
Sbjct: 688 -PEPKKEK---------AITAVKGKDYHVSLE-----LDLRGERYENALSRVEKYLDDAV 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V ++L+NH V +++ + G T+ +K
Sbjct: 733 LAGYPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTIVELK 785
>gi|228910376|ref|ZP_04074191.1| hypothetical protein bthur0013_45230 [Bacillus thuringiensis IBL
200]
gi|228849142|gb|EEM93981.1| hypothetical protein bthur0013_45230 [Bacillus thuringiensis IBL
200]
Length = 786
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 236/813 (29%), Positives = 387/813 (47%), Gaps = 101/813 (12%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDSI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ- 671
+ + ++Q+ QLR A +N +K+ E A + +E P + + N + P+
Sbjct: 586 EAEGIIQEL-RQLRKAQL--VN--VKDHELIEAKSRLEGTAP-ELVKKQKVNVKNTAPKQ 639
Query: 672 ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 640 QLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------- 689
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
KQ E + S + S LDLRG R E+A +++ L A
Sbjct: 690 -----KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLA 735
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
S + +IHG GTG +++ V + L+ H V Y
Sbjct: 736 SYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|75762595|ref|ZP_00742445.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218899706|ref|YP_002448117.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus G9842]
gi|228903069|ref|ZP_04067206.1| hypothetical protein bthur0014_42360 [Bacillus thuringiensis IBL
4222]
gi|423358361|ref|ZP_17335864.1| MutS2 protein [Bacillus cereus VD022]
gi|423560939|ref|ZP_17537215.1| MutS2 protein [Bacillus cereus MSX-A1]
gi|434377706|ref|YP_006612350.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-789]
gi|226723045|sp|B7IJV1.1|MUTS2_BACC2 RecName: Full=MutS2 protein
gi|74489915|gb|EAO53281.1| DNA mismatch repair protein mutS [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|218542145|gb|ACK94539.1| MutS2 family protein [Bacillus cereus G9842]
gi|228856555|gb|EEN01078.1| hypothetical protein bthur0014_42360 [Bacillus thuringiensis IBL
4222]
gi|401086048|gb|EJP94280.1| MutS2 protein [Bacillus cereus VD022]
gi|401202784|gb|EJR09634.1| MutS2 protein [Bacillus cereus MSX-A1]
gi|401876263|gb|AFQ28430.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-789]
Length = 786
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 236/813 (29%), Positives = 387/813 (47%), Gaps = 101/813 (12%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDSI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ- 671
+ + ++Q+ QLR A +N +K+ E A + +E P + + N + P+
Sbjct: 586 EAEGIIQEL-RQLRKAQL--VN--VKDHELIEAKSRLEGTAP-ELVKKQKVNVKNTAPKQ 639
Query: 672 ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 640 QLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------- 689
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
KQ E + S + S LDLRG R E+A +++ L A
Sbjct: 690 -----KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLA 735
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
S + +IHG GTG +++ V + L+ H V Y
Sbjct: 736 SYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|294791999|ref|ZP_06757147.1| MutS2 protein [Veillonella sp. 6_1_27]
gi|294457229|gb|EFG25591.1| MutS2 protein [Veillonella sp. 6_1_27]
Length = 792
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 199/701 (28%), Positives = 335/701 (47%), Gaps = 73/701 (10%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+LD AS L +R + E + + ++ + + +IT+R +R + +K +
Sbjct: 141 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 200
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 243
+ DG+ + S++G T ++EP V NN L + I EE +L + L+A + +
Sbjct: 201 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 256
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
++ ++V I+ + +A A GV ILS+ D ++N+ +HPL+
Sbjct: 257 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 307
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
P + VP +I++ R+++ITG NTGG
Sbjct: 308 -------------P-------------------PNMVVPTNIQLGTSYRILLITGSNTGG 335
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KTLGL SLM++ GL++PA + LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 336 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 395
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L +V+THY +L
Sbjct: 396 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 455
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
EN EF TL+PTYR+ G G S+AL+IA +G + I++RA + + +
Sbjct: 456 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVERATE----YKSQFG 511
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
H E+ L E+ RK + R E + ++E E K + + AK
Sbjct: 512 SHEMEEVLSDLNEQLRKASERERALKKELDETGRMRGQLEKEKKQFNENRKQILAKAQAD 571
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ +V+ + +++ + Q + + D + S I + I+++ H P+
Sbjct: 572 AESMKRSLRVEGEAIIKQLKAQFSETNKDRLQSAINAARKGISSV---HVPEAAVDDDRK 628
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 721
+ ++ + G+ V+V SL L TV+ + G+ V + V+V ++ R N
Sbjct: 629 SLTADAIKVGQAVYVTSL-RSLGTVLSINGNRVNVDINGLTATVKVSELQSTTREEGNKL 687
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 779
+ P+ RK R GSA +E + +++ G V+EA+ +
Sbjct: 688 AREQKAVMPKTRK----RMGGSAVQRQKEV---------RTEINILGQTVDEATVSVGRF 734
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
I A + + +IHG GTG ++E V + LR P VA +E
Sbjct: 735 IDQALLGGINQVRIIHGKGTGALREGVHQYLRTLPHVAHFE 775
>gi|238019115|ref|ZP_04599541.1| hypothetical protein VEIDISOL_00977 [Veillonella dispar ATCC 17748]
gi|237863814|gb|EEP65104.1| hypothetical protein VEIDISOL_00977 [Veillonella dispar ATCC 17748]
Length = 812
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 202/701 (28%), Positives = 335/701 (47%), Gaps = 73/701 (10%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+LD AS L +R + E + + ++ + + +IT+R +R + +K +
Sbjct: 161 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 220
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 243
+ DG+ + S++G T ++EP V NN L + I EE +L + L+A + +
Sbjct: 221 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 276
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
++ ++V I+ + +A A GV ILS+ D ++N+ +HPL+
Sbjct: 277 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 327
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
P + VP +I++ R+++ITG NTGG
Sbjct: 328 -------------P-------------------PNVVVPTNIQLGTSYRILLITGSNTGG 355
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KTLGL SLM++ GL++PA + LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 356 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPIFQNIFADIGDEQSIEASLSTFSAHMTQVI 415
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L +V+THY +L
Sbjct: 416 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 475
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
EN EF TL+PTYR+ G G S+AL+IA +G + I+ RA + + +
Sbjct: 476 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVTRAAE----YKSQFG 531
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
H E+ L E+ RK + R E + ++E E K + + + AK
Sbjct: 532 SHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEKKQFNEKRKQILAKAQAD 591
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ +V+ + +++ ++Q + + D+ S I + I+ + P DD S T
Sbjct: 592 AESMKRSLRVEGEAIIKQLKSQFSETNKDKRQSAINAARKGISNVHVPEAPVDDDRKSLT 651
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 721
+ + G+ V+V SL L TV+ + G+ V + V+V ++ R N
Sbjct: 652 ADA---IKVGQAVYVTSL-RSLGTVLAINGNRVNVDINGLTATVKVSELQSTTREEGNKL 707
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 779
+ P+ RK R GSA +E + +++ G V+EA+ +
Sbjct: 708 EREQKAAMPKTRK----RMGGSAVQRQKEV---------RTEINILGQTVDEATVSVGRF 754
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
I A + + +IHG GTG ++E V + LR P VA +E
Sbjct: 755 IDQALLGGVNQVRIIHGKGTGALREGVHQYLRTLPHVAHFE 795
>gi|196034369|ref|ZP_03101778.1| MutS2 family protein [Bacillus cereus W]
gi|218905777|ref|YP_002453611.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus AH820]
gi|228929599|ref|ZP_04092617.1| hypothetical protein bthur0010_42830 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|226723044|sp|B7JR57.1|MUTS2_BACC0 RecName: Full=MutS2 protein
gi|195992911|gb|EDX56870.1| MutS2 family protein [Bacillus cereus W]
gi|218535887|gb|ACK88285.1| MutS2 family protein [Bacillus cereus AH820]
gi|228829986|gb|EEM75605.1| hypothetical protein bthur0010_42830 [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
Length = 786
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 239/832 (28%), Positives = 393/832 (47%), Gaps = 105/832 (12%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + V+ NTS
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK------VNVKNTSPK 638
Query: 669 TP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 639 QQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP------- 689
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACW 785
KQ E + + + S LDLRG R E A +++ L A
Sbjct: 690 ------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDDAQL 734
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 735 ASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|403744515|ref|ZP_10953741.1| MutS2 family protein [Alicyclobacillus hesperidum URH17-3-68]
gi|403122049|gb|EJY56297.1| MutS2 family protein [Alicyclobacillus hesperidum URH17-3-68]
Length = 780
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 242/838 (28%), Positives = 385/838 (45%), Gaps = 111/838 (13%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
PF E L A ++++ + + DI L+ A G +L ++ A+ +
Sbjct: 39 PFSFRAEAESALAKVDEAYRCLLRAGSPPFAGVTDIRPALSRAKVGGVLGADQVLAIAQF 98
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCI--DCKLLIIL 128
+ A +++ E A + D P+L ELL L E++I + D + +L
Sbjct: 99 I-AGGRAFRQFIEHAATEIDL-----PVLSELLAPMADLRRTEQEIRQVVSDDGQ---VL 149
Query: 129 DRASEDL----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
D AS+ L R LD LL+ ++ Q +P++ R C+ ++
Sbjct: 150 DHASDVLLQLRSERRRREGEVRTTLDRLLR-THQKLLQ-----EPIVAMRGPYYCLPVRV 203
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTAEI 241
HK L GI +VSSSG+T F+EP+ E R+ E+ EE I L ++A I
Sbjct: 204 EHKNQL-RGIVRDVSSSGSTVFIEPRAVSEIGE---RIREIEVLEEREIERILQQISAVI 259
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A E++ + + + DL FA+AG+A+ + G P L+ D + G +HP L
Sbjct: 260 ATVSEELETNVALLEQADLIFAKAGYARRIGGKRPQLT-------DGVWRLHGARHPQLH 312
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
+ VPID+++ + R+++ITGPNT
Sbjct: 313 PAG------------------------------------VPIDVELGADFRLLIITGPNT 336
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT+GL +LM+ +GL+LP + + + + DIGD QS+EQ+LSTFS H+
Sbjct: 337 GGKTVTLKTVGLLTLMAMSGLFLPTRRESEIGFCRDVFVDIGDEQSIEQSLSTFSSHMKN 396
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
I+ +L+ V +SLVL+DE+G+GTDP+EG ALA +IL L + TTHYA+L
Sbjct: 397 IIQMLQQVDEKSLVLLDELGAGTDPAEGSALAIAILDRLTQVGARVMATTHYAELKGYAF 456
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
++ NA+ EF L +LRPTYR+L G G SNAL IA+ +G I+ A++ V
Sbjct: 457 HNSHAMNASMEFDLASLRPTYRLLMGVPGRSNALAIAQRLGLPDDILAAAREHV------ 510
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
+E + E KLE+ R A L E + + + + LD R L +
Sbjct: 511 ------AETDVHVEELIGKLEAANREAERLRDEAARAWEDARAQMEQLDARETALDKELA 564
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
++ N A ++ Q+ E +R+ ++ + +E P+ S
Sbjct: 565 DVRERARNEAASIVEKAQQEAERIIRELRQMRHTTVKDHELVELRKGLEGLVPERKASPR 624
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
+ S G++V V SLG K VVEV D + LVQ G MR++V N++ +
Sbjct: 625 RSGKVSPKLSVGQRVRVISLGQK-GDVVEVAPDSKSALVQLGAMRMKVVVNDLEVL---- 679
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 781
A P S+ + G + + LD+RG VE+A ++D
Sbjct: 680 -AEAVEP---------------VAISHSKKRVGNK--DVRMQLDVRGETVEDALMRIDKY 721
Query: 782 L--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
L A + + +IHG GTG +K + L+ HP+V E +S G TV ++
Sbjct: 722 LDDAVVAGLARIVIIHGKGTGALKTAIRRHLQGHPQVKTSEPAAQSEGGDGATVVSVR 779
>gi|356498910|ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
Length = 792
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 232/773 (30%), Positives = 373/773 (48%), Gaps = 102/773 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQL- 59
+G ++ ++ EES KLL +T+AA+ M + L L A ++ +A+
Sbjct: 62 LGRQALKDQLWSLNQTFEESLKLLEETNAAVEMNKHGTLRLHLGHLDAMLVKTAIQHARR 121
Query: 60 ---LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
+S E A+ L+ V L + D D R+ PL E++ L + I
Sbjct: 122 SIPVSGYEARAIVALLQCAEIVQGDLKAVIKEDKDWHNRFMPLTEVIMEFVINRSLIKAI 181
Query: 117 GFCIDCKLLIILDRASEDLELIRAERK---RNMENL-DSLLK--KVAAQIFQAGGIDKPL 170
+D + I D AS L+ R + + R ++ L +S+++ K + ID
Sbjct: 182 EQVVD-EDGSIKDSASPALKQARQQVQVIERKVQQLIESIIRNEKSETSTLEVNNID--- 237
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
R CV + + K G+ L+ S SG +EP AV N+ R + + E
Sbjct: 238 -----GRWCVRVDSGQKTSF-KGLLLS-SGSGVGSTIEPLSAVPLNDELQRARSLVVKAE 290
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL-------SSQSH 283
+L LT ++ +I+ ++ ++E+D+ ARA + G P + SS +
Sbjct: 291 ADVLLALTKKMQLDLDDIEKTLNSLVELDVINARATYGLSFGGSSPHIFLPDRSSSSTAE 350
Query: 284 VSFDSSINIEG--------------IKHPLLLGSSLRSLSAASSNSNPLKSD--VENSEM 327
S N+ G HPLLL L A N N SD ++N+
Sbjct: 351 AFLPRSENLYGPLPSKREWTLYLLKAYHPLLLQRHKEKLRKAKKNVNLATSDAALDNAP- 409
Query: 328 TVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAK 387
PVP+D V +TRV+VITGPNTGGKT +KT+GLA++M+K+GLY+ A
Sbjct: 410 ------------PVPVDFLVSQKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLAS 457
Query: 388 NHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPS 447
++PWFD + ADIGD QSL Q+LSTFSGH+ +I +I + +SLVL+DE+G+GT+P
Sbjct: 458 ESAQIPWFDSVFADIGDEQSLSQSLSTFSGHLKQISNIKSQSTSQSLVLLDEVGAGTNPL 517
Query: 448 EGVALATSILQ-YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
EG AL ++L+ + +D L + TTH+ +L LK D FENA EF L+PTY++LW
Sbjct: 518 EGAALGMALLESFAQDSCLLTMATTHHGELKTLKYSDEAFENACMEFDEVNLKPTYKVLW 577
Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKL--------------VERLRPERQQ-------- 544
G G SNA+NIA+ +G ++ A+ L +ERL+ E Q+
Sbjct: 578 GVPGRSNAINIAERLGLPSVVVDTARMLYGSASAEIDEVITDMERLKQEYQELLDEARHY 637
Query: 545 --HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
H + LY SL+ RRK+ + +L + M R++ EA + R H K +E
Sbjct: 638 LRHSRG-LYNSLLNTRRKI---IEYSTNLRFKKM---RDV-SEAAAMARSILHKKVRELD 689
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
++ + I + N+ + + ++ ++ +S S++ F+ S
Sbjct: 690 ASAKQPSQNNKTISSSNLSATNKSQTVAENKEPTIADKSASSVKV----------FNRSR 739
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
++ S P+ G+ VHV SLG K TV++V ++VQ G M++++K +I+
Sbjct: 740 SDKSG-PPKVGDMVHVSSLG-KQVTVLKVDSSKGEIVVQAGNMKLKLKLTDIQ 790
>gi|152976937|ref|YP_001376454.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cytotoxicus NVH 391-98]
gi|189030426|sp|A7GTK1.1|MUTS2_BACCN RecName: Full=MutS2 protein
gi|152025689|gb|ABS23459.1| MutS2 family protein [Bacillus cytotoxicus NVH 391-98]
Length = 786
Score = 264 bits (675), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 234/809 (28%), Positives = 375/809 (46%), Gaps = 101/809 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + K+ E +G L P+L
Sbjct: 65 LGGIFDIRSNVKRAKIGSMLSPHELLDIASTMYGSRQM-KRFIEDIVDNGAQL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI + LD AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITGCIGDGGEV-LDSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ + +D FA+A +A+ M
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAAEADIVLANVEVIANLDFIFAKALYAKRMKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMELRQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
VP DI + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --KVIVPNDIVLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVQEESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVHNRGARVVATTHYPELKAYGYNRNQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + ++ + L E ++ E + A L +
Sbjct: 493 EISKRLGLSERVINRARNHI-----STDTNKIENMIAKLEESQKNAERDWKEAEELRKQS 547
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI- 634
L+RE++ + + + K ++ ++++ AK + + ++++ QLR A +
Sbjct: 548 EKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEAIIREL-RQLRKAQLANVK 606
Query: 635 -NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
+ LI+ A E + + P G++V V + G K + +V
Sbjct: 607 DHELIEAKSRLEGAAPELVKKQKVKVKNTAPKQQLRP--GDEVKVLTFGQKGQLLKKV-- 662
Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 753
D VQ G ++++VK++++ I KQ E + + + S
Sbjct: 663 SDSEWNVQIGILKMKVKESDMEYINTP-------------KQLEKKAVATVKGRDYHVSL 709
Query: 754 GPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLE 808
LDLRG R E A ++ D LA + S +IHG GTG +++ V +
Sbjct: 710 ---------ELDLRGERFENAMMRVEKYLDDAQLANYPRVS---IIHGKGTGALRQGVQD 757
Query: 809 ILRNHPRVA--KYEQESPMNYGCTVAYIK 835
L+NH V +Y G TV +K
Sbjct: 758 YLKNHRGVKSFRYGDMGEGGLGVTVVELK 786
>gi|423452167|ref|ZP_17429020.1| MutS2 protein [Bacillus cereus BAG5X1-1]
gi|401142238|gb|EJQ49787.1| MutS2 protein [Bacillus cereus BAG5X1-1]
Length = 786
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 237/796 (29%), Positives = 381/796 (47%), Gaps = 109/796 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
I+K +G ++I RA+ + + + E + E ++ ER++ E + + LH
Sbjct: 493 EISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEYRKQSEKLHR 552
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 553 ELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVN 604
Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLGDKL 685
+ + LI+ E A +V+ + V+ NT+ P G++V V + G K
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQK------VNVKNTAPKQQLRP--GDEVKVLTFGQKG 656
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLKKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 804 ERVLEILRNHPRVAKY 819
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKTY 768
>gi|423615062|ref|ZP_17590896.1| MutS2 protein [Bacillus cereus VD115]
gi|401261918|gb|EJR68069.1| MutS2 protein [Bacillus cereus VD115]
Length = 786
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 234/817 (28%), Positives = 385/817 (47%), Gaps = 109/817 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I D+ + A G +LSP+E+ + T+ N+
Sbjct: 45 ELQDTTDEAAKVIRLKGSAPL--GGITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L R NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNRERVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++ + QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIHEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + S + S LDLRG R E+A +++ L
Sbjct: 690 ---------KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A S + +IHG GTG +++ V + L+ H V Y
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|254724521|ref|ZP_05186304.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. A1055]
Length = 786
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 237/835 (28%), Positives = 391/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSNRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|325568915|ref|ZP_08145208.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus ATCC
12755]
gi|325157953|gb|EGC70109.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus ATCC
12755]
Length = 787
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 220/726 (30%), Positives = 352/726 (48%), Gaps = 106/726 (14%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS L IR +R E LD +++ A+ + ++T R R + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 239
K ++ + G+ + SSSG T F+EPK VE NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILTELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+A +REI + + +D A+A F + M + P ++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKDYQAVVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL +M +AGL + A+ ++ F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGIFNEIFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ IVD+L+ V SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TTIVDVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
+ NA+ EF ++TL PTYR+L G G SNA I+K +G II +A++++
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPETIIDQAKEIM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYRE-IEDEAKDLDR 591
+ + +E+ L R+ E++ + AA LH E+ Y E+ K+L
Sbjct: 512 -DGESQDLNEMIADLENRRKMTETEYLEVRHHVKEAARLHQELEAAYSYFFEEREKEL-- 568
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVE 650
AK Q+ Q + AK + + ++ D QL + ++ + ++ + +
Sbjct: 569 ------AKARQKANQIVEEAKEESEKIIADIRKMQLAGGQTKVKEHELIDARTKLSGLQQ 622
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
+ V + ++ T + G++V V S G + +++ G + VQ G +++ +
Sbjct: 623 EEHLQKN-KVLQKAKAAKTLKEGDEVLVTSYGQR-GVLLKKAGKNQW-QVQIGILKMNLP 679
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
+ +++P K P R+ ++ A P V N LDLRG R
Sbjct: 680 ETDLQPAAPVK-----EPTQRIV------------NTIRSADSSPVV----NQLDLRGKR 718
Query: 771 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
EEA +++D L A + ++HG GTG +++ + + L+NH V +E +P N G
Sbjct: 719 YEEALNEVDQYLDAAILAGYPQVTIVHGKGTGALRQGITDYLKNHRSVKSFE-FAPANQG 777
Query: 829 CTVAYI 834
A I
Sbjct: 778 GNGATI 783
>gi|225571366|ref|ZP_03780362.1| hypothetical protein CLOHYLEM_07464 [Clostridium hylemonae DSM
15053]
gi|225159842|gb|EEG72461.1| hypothetical protein CLOHYLEM_07464 [Clostridium hylemonae DSM
15053]
Length = 791
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 215/672 (31%), Positives = 320/672 (47%), Gaps = 105/672 (15%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R C+ +KA H+ + G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCIPVKAEHRGHV-QGLIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+AE A+ + I+ + E+D FA+ A M+ P+ +++
Sbjct: 245 EIQVILARLSAETAEHIQTIRTNCTVLTELDFIFAKGSLALDMNASMPLFNTEGR----- 299
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I+I +HPLL + TV VPI I +
Sbjct: 300 -IHIREGRHPLL------------------------DKHTV-----------VPITITLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 DTFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELSVFHDVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L+ V SL+L DE+G+GTDP+EG ALA SIL +L +R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKQVDEHSLILFDELGAGTDPTEGAALAISILNHLHERGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF LETLRPTY +L G G SNA IA +G II
Sbjct: 444 ATTHYSELKVYALTTPGVENACCEFDLETLRPTYHLLIGIPGKSNAFAIAGKLGLPSYII 503
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DE 585
+ A+ R + E ++ L+ + LE+ RT AEI RE+E DE
Sbjct: 504 EEAK---------RHLSEQDESFEDLLAD---LEANRRTIEKEQAEIASYRRELERLKDE 551
Query: 586 A----KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRD--ASAD---EINS 636
A K LD + + + ++ L AK D +++F ++ ++AD E
Sbjct: 552 ASQKQKKLDEQKERILREANEKAHAILAEAKDVADETMRNFHKFGKENISAADMERERER 611
Query: 637 LIKESESAIAAI-------VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
L K+ S + + + H+P D + GE V V S+ + TV
Sbjct: 612 LRKKMASTASGMDRQVKKPQKQHKPGD-------------FKLGESVKVLSM-NLTGTVN 657
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
+P V VQ G +R +V +++ I AP +Q + +S
Sbjct: 658 SLPDAKGNVTVQMGILRSQVNISDLEII---------EEAPSYSAKQLHK------TSKG 702
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 807
+ G S ++L G V+EA +LD L A S + V+HG GTG ++ +
Sbjct: 703 KMKMGKSFSVSAE-INLLGKTVDEAVAELDKYLDDASLAHLSSVRVVHGKGTGALRTGIH 761
Query: 808 EILRNHPRVAKY 819
L+ RV Y
Sbjct: 762 NYLKRQKRVKSY 773
>gi|417962044|ref|ZP_12604329.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-2]
gi|380331334|gb|EIA22399.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-2]
Length = 706
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 226/739 (30%), Positives = 351/739 (47%), Gaps = 126/739 (17%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS++L IR E K ++ L ++ + + + + T R R C+ +K+ +
Sbjct: 64 ISDFASDNLFKIRKELKSKTASIKRKLSEILKTYSKY--LQENVFTVRGDRYCIPVKSEY 121
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K + GI N SSSG+TYF+EP V NN L +E E IL L+ +I S
Sbjct: 122 KSQIQ-GIIHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSID 180
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
I + + ++ F + ++ +DG+ P ++ + S+ +HPL+
Sbjct: 181 NIYLSIKIIYSLEFIFGKGNYSIEIDGIKPDVNDGEDIYLISA------RHPLIN----- 229
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+ DV VP+++ + + ++ITGPNTGGKT
Sbjct: 230 ------------REDV------------------VPLNLDFTKDRKAIIITGPNTGGKTV 259
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL LM+ +GL++PA R+ + + I ADIGD QSLEQNLSTFS HI I+ +
Sbjct: 260 TLKTLGLMHLMAHSGLFIPAYEGSRVMFLNEIFADIGDEQSLEQNLSTFSSHIKNIISMT 319
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ + ++LVL+DE+GSGTDP EG ALA SI+++ + + TTHY+ L
Sbjct: 320 DNIKDKTLVLLDEVGSGTDPEEGAALAISIMEHFINSGCKLMGTTHYSQLKTYAINSDNV 379
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA+ EF ++TLRPTYR+ G G SNA IA S+G ++ II+ AQK
Sbjct: 380 ENASVEFDVKTLRPTYRLNVGIPGKSNAFIIADSLGMNQSIIENAQKY------------ 427
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDL-DRRAAHLKAKETQ 602
L E+ K ES +T E + REIE +E K L D+ L+ E +
Sbjct: 428 -------LSEDIIKFESIIKTLEEKTTEAIKNNREIEILREENKILNDKLKKRLENIEKE 480
Query: 603 QVQ----------QELNFAKVQIDTVVQDFENQLRDASADEINSL----IKESESAIAAI 648
+++ Q ++ AK +ID V L+ +A E+N + +K+ ESA I
Sbjct: 481 KLRIIESAKDEGYQIISNAKGEIDKV-------LKIINALEMNGIDLSSVKDLESARREI 533
Query: 649 VEAHRPDDDFSVSE----TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
+ D ++E N+S F +F G +K +G + ++E P VLVQ
Sbjct: 534 --KKKIDKQNKMNEEKSFKNSSKFNIEFKSGMTAFLKRIGQNV-IILENPDSKGNVLVQA 590
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G +++ V NI + + + + ++ K + D + R T
Sbjct: 591 GVLKLTV---NIAELESPIK----DKFSKVIKSKRDLK--------------LRTNTIST 629
Query: 763 SLDLRGM----RVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 818
SLDLRGM + E LD A + + +IHG GTGV+K + +LRNH V
Sbjct: 630 SLDLRGMDELNAISEVEKYLDDAFVSGLNE--VCIIHGKGTGVLKNSINNLLRNHIHVKA 687
Query: 819 YE--QESPMNYGCTVAYIK 835
+ + G T+ Y+K
Sbjct: 688 HRLGEYGEGGNGVTIVYLK 706
>gi|228967649|ref|ZP_04128670.1| hypothetical protein bthur0004_44420 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|402563934|ref|YP_006606658.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-771]
gi|228792025|gb|EEM39606.1| hypothetical protein bthur0004_44420 [Bacillus thuringiensis
serovar sotto str. T04001]
gi|401792586|gb|AFQ18625.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis HD-771]
Length = 786
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 236/813 (29%), Positives = 387/813 (47%), Gaps = 101/813 (12%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDSI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEVDIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ- 671
+ + ++Q+ QLR A +N +K+ E A + +E P + + N + P+
Sbjct: 586 EAEGIIQEL-RQLRKAQL--VN--VKDHELIEAKSRLEGTAP-ELVKKQKVNVKNTAPKQ 639
Query: 672 ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 640 QLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------- 689
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
KQ E + S + S LDLRG R E+A +++ L A
Sbjct: 690 -----KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLA 735
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
S + +IHG GTG +++ V + L+ H V Y
Sbjct: 736 SYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|423400603|ref|ZP_17377776.1| MutS2 protein [Bacillus cereus BAG2X1-2]
gi|423457214|ref|ZP_17434011.1| MutS2 protein [Bacillus cereus BAG5X2-1]
gi|423478688|ref|ZP_17455403.1| MutS2 protein [Bacillus cereus BAG6X1-1]
gi|401148991|gb|EJQ56474.1| MutS2 protein [Bacillus cereus BAG5X2-1]
gi|401655327|gb|EJS72861.1| MutS2 protein [Bacillus cereus BAG2X1-2]
gi|402426719|gb|EJV58834.1| MutS2 protein [Bacillus cereus BAG6X1-1]
Length = 786
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 236/813 (29%), Positives = 387/813 (47%), Gaps = 101/813 (12%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREKVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSSFTPQ- 671
+ + ++++ QLR A IN +K+ E A + +E P + + N + P+
Sbjct: 586 EAEGIIREL-RQLRKAQL--IN--VKDHELIEAKSRLEGTAP-ELVKKQKVNVKNTAPKQ 639
Query: 672 ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 640 QLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------- 689
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
KQ E + S + S LDLRG R E+A +++ L A
Sbjct: 690 -----KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLA 735
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
S + +IHG GTG +++ V + L+ H V Y
Sbjct: 736 SYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|429204941|ref|ZP_19196222.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
gi|428146803|gb|EKW99038.1| DNA mismatch repair protein [Lactobacillus saerimneri 30a]
Length = 786
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 217/697 (31%), Positives = 337/697 (48%), Gaps = 129/697 (18%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
++T R R + ++ ++ G+ + S+SG T F+EPK VE NN R ++E E
Sbjct: 188 IVTIRNDRYVIPVRQEYRNKF-GGVVHDQSASGQTVFVEPKAIVELNNRLKRQQSAEREE 246
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL+ L+A IA E++ + ++D A+A +A + PI+ + D++
Sbjct: 247 VKRILAELSALIAPYTEELQANAHIIGQLDFVNAKARYAHAIKATEPIIDT------DNN 300
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
+ + + HPLL+ P K+ V N DI +
Sbjct: 301 VYLRQVWHPLLV---------------PQKA-VRN-------------------DIMLGK 325
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ + ++ITGPNTGGKT ++KTLGL +M ++GL++PA R+ F I ADIGD QS+E
Sbjct: 326 DYQAIIITGPNTGGKTITLKTLGLVQMMGQSGLFIPAYEESRIGIFTDIFADIGDEQSIE 385
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
QNLSTFS H+ IV+IL+ + SLVL DE+G+GTDP EG +LA +IL + V
Sbjct: 386 QNLSTFSSHMVNIVNILQHIDAHSLVLFDELGAGTDPQEGASLAIAILDAVGATGAYVVA 445
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L + NA+ EF +ETL+PTYR+L G G SNA NI++ +G D II
Sbjct: 446 TTHYPELKAYGFERPGTINASMEFDVETLQPTYRLLLGIPGRSNAFNISRRLGLDETIIA 505
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASLHAEIMDLYREI 582
AQ+L + + + L+ +R + E +A A LH ++ Y ++
Sbjct: 506 AAQELT-----TQDSQDLNAMITDLVAKRHQAEEEAIALQKHLEEAEKLHHDLAQAYEKL 560
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF------------ENQLRDAS 630
E L +A +KA + QV Q+ + D ++ D ENQL DA
Sbjct: 561 VAERSHLTEQAK-MKANDIVQVAQK------KADAIINDLRAMRLNGAATVKENQLIDAQ 613
Query: 631 ADEINSL---IKESESAI---AAIVEAHRPDDDFSVSETNTSSFTPQFGEQ-VHVKSLGD 683
++NSL I+ + + A +A P+DD V +G+Q V ++ LGD
Sbjct: 614 T-QLNSLHQDIRLQHNKVLRKAKEKQALHPNDDVLVRS---------YGQQGVLIQKLGD 663
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K VQ G +++++ ++++ I ++K PR SG
Sbjct: 664 KQWE------------VQLGILKMKIDEDDLEKIHVQEKKQ-----PR---------SGV 697
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 801
S +AS+ +SLDLRG R EEA +D I A + ++HG GTG
Sbjct: 698 VLRS-AQASH------VSSSLDLRGQRYEEALTNIDRYIDAALLAGYKQVTIVHGKGTGA 750
Query: 802 VKERVLEILRNHPRVAKYEQESPMNY---GCTVAYIK 835
++ + + L N+ V K+ Q +P N G T+ Y K
Sbjct: 751 LRSGITKYLENNRSVKKF-QFAPPNAGGNGATIVYFK 786
>gi|291545360|emb|CBL18468.1| MutS2 family protein [Ruminococcus sp. SR1/5]
Length = 793
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 246/846 (29%), Positives = 388/846 (45%), Gaps = 120/846 (14%)
Query: 5 VVQKAQIPFGKSL----------EESQKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNS 53
+ KA P GK L EE + + QT ALA + + + +++DI G L
Sbjct: 18 LTDKASSPMGKDLCRKLTPSTDIEEIRAMQLQTHDALARLFKKGGISFGSVKDIRGTLKR 77
Query: 54 AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTE 111
G L+ E+ +V L V K + + DG DSL LE L T
Sbjct: 78 LTVGSALNAPELLSVCSLLENTGRV-KAYSRSDRDDGMTDSLDGMFAALEPL------TP 130
Query: 112 LEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGID 167
L +I CI + I D AS L IR A R L SL+ A Q
Sbjct: 131 LSTEIRRCILSEDEIS-DDASSTLRQIRRSIKATNDRIHTQLSSLVAGSARNYLQ----- 184
Query: 168 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
+IT R R C+ +KA +K +P G+ + S++G+T F+EP V+ NN L E
Sbjct: 185 DSVITMRDGRYCIPVKAEYKGQVP-GMIHDQSATGSTLFIEPMAVVKLNNDIRELELKEQ 243
Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
E IL+ L+ ++A I + ++++D FARA A M+ P+ +++
Sbjct: 244 KEIEVILASLSQQVAAELEAIHADLSIMVQLDFIFARAALAMDMNASEPVFNTEGR---- 299
Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
I + +HPL+ D + + VPIDI++
Sbjct: 300 --IRLRQARHPLI--------------------DKKKA---------------VPIDIRL 322
Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 407
+ ++V+TGPNTGGKT S+KT+GL ++M ++GL++PA + L F + ADIGD QS
Sbjct: 323 GDDFDLLVVTGPNTGGKTVSLKTVGLLTMMGQSGLHIPALDRSELALFREVYADIGDEQS 382
Query: 408 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
+EQ+LSTFS H++ +V L+ ++SLVL DE+G+GTDP+EG ALA +IL +L ++
Sbjct: 383 IEQSLSTFSSHMTNVVSFLKSADQDSLVLFDELGAGTDPTEGAALAIAILSHLHEQGIRT 442
Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
+ TTHY++L ENA EF +ETLRPTYR+L G G SNA I+ +G I
Sbjct: 443 MATTHYSELKIYALSTPGVENACCEFDVETLRPTYRLLIGVPGKSNAFAISSKLGLPDFI 502
Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
I +A++ + Q ++ SL + R +E++ A ++ +L + ++++ +
Sbjct: 503 IDKAKEQI-----SEQDESFEDVLTSLEQSRVTIENERAEIARYKEQVEELKKSLQEKEE 557
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
LD R + + +Q L K D ++ F +D + S+ KE ++
Sbjct: 558 KLDERKERILREANEQAHAILRDTKEYADQTMKLFHKFQKDHV--DTASVEKERQNLKKR 615
Query: 648 IVEAH-----RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
+ +A R + S + G+ V V SL K TV P + VQ
Sbjct: 616 MSKAENGMSSRQQKQKPKKQLKPSDLS--LGDTVKVLSLNLK-GTVSSHPDSRGYLFVQM 672
Query: 703 GKMRVRVKKNNI----RPI---PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 755
G +R +V +++ P+ P+ +R A R S +A S E
Sbjct: 673 GIIRSKVHISDLELVDEPVITTPSMQRTGAGKI----------RMSKAASISTE------ 716
Query: 756 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 813
++L G V+EA +LD L A + ++HG GTG +++ V L+
Sbjct: 717 --------INLLGKTVDEAVAELDKYLDDAYIAHMKSVRIVHGKGTGALRKGVHNYLKRQ 768
Query: 814 PRVAKY 819
VA +
Sbjct: 769 KHVASF 774
>gi|420263850|ref|ZP_14766486.1| DNA mismatch repair protein MutS [Enterococcus sp. C1]
gi|394769292|gb|EJF49155.1| DNA mismatch repair protein MutS [Enterococcus sp. C1]
Length = 787
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 219/726 (30%), Positives = 352/726 (48%), Gaps = 106/726 (14%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS L IR +R E LD +++ A+ + ++T R R + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 239
K ++ + G+ + SSSG T F+EPK VE NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILAELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+A +REI + + +D A+A F + M + P ++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKDYQAVVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL +M +AGL + A+ ++ F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGIFNEIFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ IVD+L+ + SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TTIVDVLKKIDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
+ NA+ EF ++TL PTYR+L G G SNA I+K +G II +A++++
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPETIIDQAKEIM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYRE-IEDEAKDLDR 591
+ + +E+ L R+ E++ + AA LH E+ Y E+ K+L
Sbjct: 512 -DGESQDLNEMIADLENRRKMTETEYLEVRHHVKEAARLHQELEAAYSYFFEEREKEL-- 568
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVE 650
AK Q+ Q + AK + + ++ D QL + ++ + ++ + +
Sbjct: 569 ------AKARQKANQIVEEAKEESEKIIADIRKMQLAGGQTKVKEHELIDARTKLSGLQQ 622
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
+ V + ++ T + G++V V S G + +++ G + VQ G +++ +
Sbjct: 623 EEHLQKN-KVLQKAKAAKTLKEGDEVLVTSYGQR-GVLLKKAGKNQW-QVQIGILKMNLP 679
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
+ +++P K P R+ ++ A P V N LDLRG R
Sbjct: 680 ETDLQPAAPVK-----EPTQRIV------------NTIRSADSSPVV----NQLDLRGKR 718
Query: 771 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
EEA +++D L A + ++HG GTG +++ + + L+NH V +E +P N G
Sbjct: 719 YEEALNEVDQYLDAAILAGYPQVTIVHGKGTGALRQGITDYLKNHRSVKSFE-FAPANQG 777
Query: 829 CTVAYI 834
A I
Sbjct: 778 GNGATI 783
>gi|423395169|ref|ZP_17372370.1| MutS2 protein [Bacillus cereus BAG2X1-1]
gi|423406028|ref|ZP_17383177.1| MutS2 protein [Bacillus cereus BAG2X1-3]
gi|401655940|gb|EJS73468.1| MutS2 protein [Bacillus cereus BAG2X1-1]
gi|401660697|gb|EJS78175.1| MutS2 protein [Bacillus cereus BAG2X1-3]
Length = 786
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 242/837 (28%), Positives = 395/837 (47%), Gaps = 115/837 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILERHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKHIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
L E ++ E A +L + L+RE++ + + DR LKA+ ++ ++++ A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIVEFNEDRDERLLKAQ--KEGEEKVEAA 583
Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
K + + ++Q+ QLR A + + LI+ E A +V+ + N
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633
Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ P+ G++V V + G K + ++ D VQ G ++++VK++N+ I
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKIS--DTEWSVQIGILKMKVKESNMEYINTP-- 689
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
KQ E + S + S LDLRG R E A +++ L
Sbjct: 690 -----------KQTEKKAVASVKGRDYHVSL---------ELDLRGERFENAMVRVEKYL 729
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 730 DDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|228923296|ref|ZP_04086584.1| hypothetical protein bthur0011_42750 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|423582763|ref|ZP_17558874.1| MutS2 protein [Bacillus cereus VD014]
gi|423634569|ref|ZP_17610222.1| MutS2 protein [Bacillus cereus VD156]
gi|228836250|gb|EEM81603.1| hypothetical protein bthur0011_42750 [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|401211578|gb|EJR18325.1| MutS2 protein [Bacillus cereus VD014]
gi|401280548|gb|EJR86468.1| MutS2 protein [Bacillus cereus VD156]
Length = 786
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 239/837 (28%), Positives = 396/837 (47%), Gaps = 115/837 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
+ + + A+ +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 KRFIEDMAD-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
L E ++ E A +L + L+R+++ + + DR LKA+ ++ ++++ A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRDLQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583
Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
K + + ++Q+ QLR A + + LI+ E A +V+ + N
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633
Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-- 689
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 -----------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYL 729
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 730 DDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|291530786|emb|CBK96371.1| MutS2 family protein [Eubacterium siraeum 70/3]
Length = 793
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 211/711 (29%), Positives = 341/711 (47%), Gaps = 99/711 (13%)
Query: 129 DRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
D AS L IR +R E LD L+K + Q + + + L+T R R V +K
Sbjct: 144 DSASPQLAAIRRSIQRKSLAVRERLDKLIKSQSTQKY----LQESLVTMRDGRFVVPVKT 199
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE-------IAEETAILSLL 237
+K + G+ + S++GAT F+EP VE NN E+R+ E I +E + L
Sbjct: 200 EYKSEIS-GLVHDTSATGATLFIEPMAVVEANN-EIRVLQIEEQKEIERIIKEMSELVGS 257
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
AE ++ EI VL +++ FA+A M V P+++ + N+ +H
Sbjct: 258 FAEPMINDYEI------VLTLEIYFAKANLGAKMKAVTPVITDKP------CFNLIRARH 305
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PL+ D VPI +++ + +++T
Sbjct: 306 PLI-----------------------------------DKDKVVPISLELGNDYSSLIVT 330
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT S+KT GL LM+ G+ +PA + + FD + DIGD QS+EQ+LSTFS
Sbjct: 331 GPNTGGKTVSLKTAGLLVLMAMCGMMIPASENSVIGMFDELYVDIGDEQSIEQSLSTFSS 390
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
H++ I IL +SL+++DE+ SGTDP EG ALA SIL R R + TTHY ++
Sbjct: 391 HMTNIARILRTADEKSLIMLDELCSGTDPVEGSALAVSILDEFRKRDCKVIATTHYQEVK 450
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
K ENA+ EF ++TLRPTYR++ G G SNA I+ +G II A++LV
Sbjct: 451 MYAIKTDNVENASCEFDIKTLRPTYRVIVGMPGKSNAFAISSKLGISSDIIDNAKELV-- 508
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
+ R E+ QSL + R++LE +AA+ + ++ +++ E L++ K
Sbjct: 509 ---STEDKRFEEVVQSLEKTRQELEKLKSSAAAEQKKSKEITEQLKAERDQLEKD----K 561
Query: 598 AKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
KE Q V+ + + + Q D ++++ E + + + +K + S I++ V A
Sbjct: 562 EKELQDVRSKAASIIEEVRFQGDLMLEELERLRKQKESADFAQKVKGARSHISSSVNAMY 621
Query: 654 PDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
+ + + P + G+ V + L +K T++ +P + VQ G M+ + K
Sbjct: 622 DTANPIMQKKIDHYVLPRPLKVGDTVRLADL-NKEGTLLRLPDSKNMCFVQVGAMKTKTK 680
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
N+R + K+++ P P + G SN G LD+RGM
Sbjct: 681 LENLRLV-EEKKESKKQPTP--------SKVGKKLVSNFSRKSG-------MELDIRGML 724
Query: 771 VEEASHQLDIAL-ACWESR-SVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
++ ++D + +C S SV+ +IHG GTG ++ V + LR +P V +
Sbjct: 725 GDDGVMEVDRFIDSCLLSGISVITIIHGKGTGALRSAVQQYLRKNPHVKSF 775
>gi|228917190|ref|ZP_04080747.1| hypothetical protein bthur0012_44020 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228935862|ref|ZP_04098672.1| hypothetical protein bthur0009_43070 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228823630|gb|EEM69452.1| hypothetical protein bthur0009_43070 [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228842391|gb|EEM87482.1| hypothetical protein bthur0012_44020 [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 786
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 237/835 (28%), Positives = 391/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|241896574|ref|ZP_04783870.1| MutS family DNA mismatch repair protein [Weissella
paramesenteroides ATCC 33313]
gi|241870166|gb|EER73917.1| MutS family DNA mismatch repair protein [Weissella
paramesenteroides ATCC 33313]
Length = 795
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 228/783 (29%), Positives = 377/783 (48%), Gaps = 88/783 (11%)
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN-CNFLTELEEKIGF 118
LS +E+ V R L + G++L P L + N L EL ++
Sbjct: 84 LSGTELAQVGRVLFTTGQIRSFFENLVADRGEAL----PALAVYYNELVILPELTRRVNV 139
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKR 174
ID + D AS +L IR + EN ++ +K+ Q + G + P++T R
Sbjct: 140 AIDGDGRLN-DEASAELHRIR-QAITGTEN--AIRQKM--QDYTRGKTAQYLSDPIVTIR 193
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA+++ G+ + S +G T ++EP V+ NN + E EE +L
Sbjct: 194 NDRYVLPVKATYRQKF-GGVIHDQSQTGQTLYIEPADVVDMNNRLREYTLKERREEERVL 252
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
L+A++ I+ + +D A+A +A + + P S ++HV +
Sbjct: 253 IELSAQLEPEADSIENNAQLLGHLDFLNAKARYAVVIKAIEPEFSPENHVRLLKA----- 307
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPLL NP D VP DI + + +
Sbjct: 308 -RHPLL---------------NP--------------------DKVVPNDIIIGEDYSAI 331
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
++TGPNTGGKT ++KTLGL +M+++GL++PA + + F I ADIGD QS+EQ+LST
Sbjct: 332 IVTGPNTGGKTITLKTLGLLQIMAQSGLFIPAAEYSSVGIFKEIFADIGDEQSIEQSLST 391
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ I+DIL ++SLVL DE+G+GTDP EG ALA +IL + + +V TTHY
Sbjct: 392 FSAHMVNIIDILSGTDKDSLVLFDELGAGTDPQEGAALAMAILDAVGETGAYSVATTHYP 451
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L NA+ EF +++LRPTY+ L G G SNAL IAK +G D+ II A L
Sbjct: 452 ELKVYGYNRADTINASMEFDIDSLRPTYKFLIGVPGRSNALEIAKKLGLDKNIIDSASAL 511
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
E +++ L+ R + +Q E L + E + + +D+
Sbjct: 512 TTEDSQEL-----NDMIADLVARRNAVLTQQVELTQKVIENRQLKNDYESKLESIDKE-- 564
Query: 595 HLKAKETQQVQQELNF----AKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 650
+AK ++ ++E N A+ + D ++ D RD +A + N LI +++ A+ A+ +
Sbjct: 565 --RAKAVEEAKKEANHIVADARRKTDKIIADLHKMARDGAAIKENKLI-DAKGALNAMHQ 621
Query: 651 AHRPDDDFSVSETNTSSFTPQF-GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
++ + + + P G+ V V+ G + V ++ D VQ G +++ +
Sbjct: 622 EPSATNNRILRKAKQAKQVPLLVGDTVLVREYGQQGTIVRKLK--DHKFEVQMGILKMVL 679
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
I K+ N + P+ K++ R++ S+ ++N+ + R + S LDLRG+
Sbjct: 680 TSEEI-----EKQTNQSTNEPKSTKKK--RRNSSSVNTNKAIN---RAEASA-KLDLRGV 728
Query: 770 RVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 827
R E A +LD I A + S + +IHG GTG +++ V E LR+H +V ++ P +
Sbjct: 729 RYEPAMAELDRFIDKALLNNLSSVEIIHGKGTGAIRQGVQEYLRSHRQVQSFKFTGP-DQ 787
Query: 828 GCT 830
G T
Sbjct: 788 GAT 790
>gi|304440485|ref|ZP_07400372.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304370963|gb|EFM24582.1| DNA mismatch repair protein MutS [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 786
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 226/787 (28%), Positives = 383/787 (48%), Gaps = 94/787 (11%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L + V LR V+ + KK E + +G S + + LL ++E++I
Sbjct: 82 GGTLGARSLLNVADFLR-VSRLLKKYIEEEDDEGKSHEIIEDMASLLFTSK---QIEDRI 137
Query: 117 GFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
CI + I D AS L IR + K+ E LDS++ ++ Q ++T
Sbjct: 138 SECIISEEEI-SDSASPKLRQIRRNIFVKNKQIREKLDSIVNS-GSKYLQDN-----IVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + +K+ +K + G+ ++S++G T ++EP V NN L E E
Sbjct: 191 MREGRYVIPVKSENKNKIK-GLVHDMSATGQTAYIEPIAVVNLNNELKTLEIEEREEIER 249
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL+ L+A +A +IK D + +D FA+A A M+ P ++ D S+ +
Sbjct: 250 ILAELSAYVADYSLQIKGNQDILSRLDFIFAKAKLAFEMEATKP------KINNDLSLKL 303
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+HPLL + + VPIDI + E
Sbjct: 304 YKARHPLLKKNEV-----------------------------------VPIDISLGKEFT 328
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
++ITGPNTGGKT ++KT+GL ++M++ GL++PA+ ++ FD I +DIGD QS+EQ+L
Sbjct: 329 SLIITGPNTGGKTVTLKTVGLLNIMAQYGLFIPAEEGSQVGIFDKIFSDIGDEQSIEQSL 388
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
STFS H+ IV+ILE SLVL DE+G+GTDP+EG ALA SI+ ++ +R + TTH
Sbjct: 389 STFSSHMVNIVNILENADERSLVLFDELGAGTDPTEGAALARSIMDFMLERKIRCISTTH 448
Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
Y L +NA+ EF ++TLRPTYR++ G G SNA I+K +G II+ A+
Sbjct: 449 YNQLKTYALTTEGVQNASMEFDVDTLRPTYRLIIGIPGKSNAFLISKRLGLRDDIIEDAK 508
Query: 533 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYRE---IEDEAKDL 589
K + + E ++ + +++ ++R ++E R+ A L+ +DL ++ +E+E +
Sbjct: 509 KQMSQDSIEFEK-----VLENIEKDRWEIEKH-RSEAELYK--IDLEKQNKRLEEELASM 560
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 649
+ + K ++ +Q +N AK + + + + ++ + + S D+ L +ES+ I +
Sbjct: 561 KEKREDILEKARREARQIINRAKEESELALSEIKDVVSEVSKDQARRL-QESQDLIRENL 619
Query: 650 EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
D + + + GE V + SL K TV+E+P + VLVQ G M+++V
Sbjct: 620 NKASKKDKILIEAVKNPAENIKPGETVMIASLNAK-GTVLELPDSNGDVLVQAGMMKMKV 678
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
KK I I D + S S+ + R T++ +D+RG
Sbjct: 679 KKEAIIRI--------------------DDEESSKSSTKNIIKHKSRTATTE--IDVRGR 716
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 827
++A ++D L + + +IHG GT V++E++ + + + ++ S
Sbjct: 717 NFDDAKVEVDKFLDDSYLSGLKSVRIIHGKGTMVLREKLRADFKKNKYIKSFDDASYNEG 776
Query: 828 GCTVAYI 834
G V +
Sbjct: 777 GNGVTVV 783
>gi|118479701|ref|YP_896852.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis str. Al Hakam]
gi|196044939|ref|ZP_03112173.1| MutS2 family protein [Bacillus cereus 03BB108]
gi|225866525|ref|YP_002751903.1| MutS2 family protein [Bacillus cereus 03BB102]
gi|229186805|ref|ZP_04313960.1| hypothetical protein bcere0004_43460 [Bacillus cereus BGSC 6E1]
gi|229198701|ref|ZP_04325400.1| hypothetical protein bcere0001_42260 [Bacillus cereus m1293]
gi|376268476|ref|YP_005121188.1| Recombination inhibitory protein MutS2 [Bacillus cereus F837/76]
gi|423573771|ref|ZP_17549890.1| MutS2 protein [Bacillus cereus MSX-D12]
gi|189030425|sp|A0RJF2.1|MUTS2_BACAH RecName: Full=MutS2 protein
gi|254766189|sp|C1ETZ0.1|MUTS2_BACC3 RecName: Full=MutS2 protein
gi|118418926|gb|ABK87345.1| DNA mismatch repair protein, MutS family [Bacillus thuringiensis
str. Al Hakam]
gi|196024427|gb|EDX63100.1| MutS2 family protein [Bacillus cereus 03BB108]
gi|225787320|gb|ACO27537.1| MutS2 family protein [Bacillus cereus 03BB102]
gi|228584777|gb|EEK42896.1| hypothetical protein bcere0001_42260 [Bacillus cereus m1293]
gi|228596542|gb|EEK54207.1| hypothetical protein bcere0004_43460 [Bacillus cereus BGSC 6E1]
gi|364514276|gb|AEW57675.1| Recombination inhibitory protein MutS2 [Bacillus cereus F837/76]
gi|401213523|gb|EJR20263.1| MutS2 protein [Bacillus cereus MSX-D12]
Length = 786
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 237/835 (28%), Positives = 391/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|416999068|ref|ZP_11939737.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella parvula ACS-068-V-Sch12]
gi|333977221|gb|EGL78080.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella parvula ACS-068-V-Sch12]
Length = 812
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 192/658 (29%), Positives = 319/658 (48%), Gaps = 73/658 (11%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT+R +R + +K ++ DG+ + S++G T ++EP V NN L + I E
Sbjct: 204 IITQRNNRYVIPVKQEYRQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGE 259
Query: 230 ETAILSL---LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
E +L + L+A + + ++ ++V I+ + +A A GV ILS+
Sbjct: 260 EQEVLRIYRELSALVKQHSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------ 313
Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
D ++N+ +HPL+ P + VP +I+
Sbjct: 314 DRTVNLMRARHPLI----------------P-------------------PNVVVPTNIQ 338
Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
+ R+++ITG NTGGKT S+KTLGL SLM++ GL++PA + LP F I ADIGD Q
Sbjct: 339 LGTSYRILLITGSNTGGKTVSLKTLGLLSLMNQCGLFIPADHGSMLPIFQNIFADIGDEQ 398
Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
S+E +LSTFS H+++++ I++ LVL+DE+GSGTDP EG ALA SIL++ R + L
Sbjct: 399 SIEASLSTFSAHMTQVISIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGAL 458
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
+V+THY +L EN EF TL+PTYR+ G G S+AL+IA +G +
Sbjct: 459 MMVSTHYNELKNYAYHTEGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKD 518
Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
I+ RA + + + H E+ L E+ RK + R E + ++E E
Sbjct: 519 IVTRAAE----YKSQFGSHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEK 574
Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
K + + + K + +V+ + +++ ++Q + + D+ S I + I+
Sbjct: 575 KQFNEKRKQILTKAQADAESMKRSLRVEGEAIIKQLKSQFSETNKDKRQSAINAARKGIS 634
Query: 647 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
+ H P+ + ++ T + G+ V+V SL L TV+ + G+ V +
Sbjct: 635 NV---HIPESPVDDDRKSLTADTIKVGQAVYVTSL-RSLGTVLAINGNRVNVDINGLTAT 690
Query: 707 VRVK--KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
V+V ++ R N + P+ RK R GSA +E + +
Sbjct: 691 VKVSELQSTTREEGNKLEREQKAAMPKTRK----RMGGSAVQRQKEV---------RTEI 737
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
++ G V+EA+ + I A + + +IHG GTG ++E V + LR P VA +E
Sbjct: 738 NILGQTVDEATVSVGRFIDQALLGGVNQVRIIHGKGTGALREGVHQYLRTLPHVAHFE 795
>gi|392531789|ref|ZP_10278926.1| recombination and DNA strand exchange inhibitor protein
[Carnobacterium maltaromaticum ATCC 35586]
Length = 788
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 239/796 (30%), Positives = 374/796 (46%), Gaps = 107/796 (13%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G +L+ EI + + LR V + + +E+ G L R L EL+ L L + I
Sbjct: 81 GAMLNGIEIAQIGKVLRTTTEVTRFFDDLSEI-GVELFR---LYELVAKLVTLPTLNQMI 136
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLIT 172
ID + +D AS+ L+ IR KR+ N LDSL++ AQ + L+T
Sbjct: 137 REAIDEDGHV-MDDASQALKGIRTGMKRSESNIREKLDSLIRGKNAQY-----LSDALVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + +KA ++ G+ + SS+G T F+EP+ V+ NN +L E E
Sbjct: 191 MRNDRYVIPVKAEYRNHF-GGVVHDQSSTGQTLFIEPQSVVDLNNKLRQLQIEERQEIDR 249
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL+ L+ EIA EI M + ++D A+A + + + P+++ ++ V F +
Sbjct: 250 ILAELSNEIAPYGAEILNNMFLLGKLDFIGAKAAYGKNIKATRPLVNEENDVRFIQA--- 306
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+HPL+ K V N DI + + +
Sbjct: 307 ---RHPLI----------------DEKQAVAN-------------------DILIGGDYQ 328
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
+VITGPNTGGKT ++KTLGL LM ++GL LP ++ F + ADIGD QS+EQ+L
Sbjct: 329 ALVITGPNTGGKTITLKTLGLLQLMGQSGLQLPVAEGSQMGIFTEVFADIGDEQSIEQSL 388
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG----LAV 468
STFS H++ IV IL + +SL+L DE+G+GTDP EG ALA +IL D+VG +
Sbjct: 389 STFSSHMTNIVSILNKIDNKSLILFDELGAGTDPQEGAALAIAIL----DQVGAVGSYVM 444
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY +L NA+ EF +ETL PTYR+L G G SNA I+K +G D +I
Sbjct: 445 ATTHYPELKAYGYNRPGTINASMEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLDTAVI 504
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
A+ L+ + + +E+ L R+ E + E LY+++ +
Sbjct: 505 DSARSLI-----DGESQNLNEMIADLENRRKMTEMEYHEVRQYVEEAETLYQDLTTALEQ 559
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAI 645
L K ++ Q ++ A+ + +V D QL + IKE E A
Sbjct: 560 FFGEREDLVKKAREKANQIVSEAEEEASKIVSDLRKMQL----TGQFEGGIKEHELIDAK 615
Query: 646 AAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
+ + H + V + + + G++V V S G + + +V G++ LVQ G
Sbjct: 616 SKLANLHHEETLTKNKVLKKAKAKQQFKKGDEVIVASYGQRGTLMEKVEGNN--WLVQLG 673
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
+++++K++++ A P K+ + + SSN+ V T
Sbjct: 674 ILKMKIKESDM---------TLAQP----EKEPTRKMVATVRSSND-----SHVST---Q 712
Query: 764 LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 821
LDLRG R E A ++D L A + ++HG GTG +++ V E L+NH V K+E
Sbjct: 713 LDLRGERYESALSEMDQYLDAALLAGYPQVTIVHGKGTGALRQGVTEALKNHRSVKKFET 772
Query: 822 ESPMNY---GCTVAYI 834
+P N G T+ Y
Sbjct: 773 -APQNQGGNGATIVYF 787
>gi|295090651|emb|CBK76758.1| MutS2 family protein [Clostridium cf. saccharolyticum K10]
Length = 816
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 242/834 (29%), Positives = 384/834 (46%), Gaps = 100/834 (11%)
Query: 16 SLEESQKLLNQ---TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S + S+ + NQ T A + Q L ++DI L G L+ E+ AV L
Sbjct: 37 SCDYSEIVQNQQETTDAVTRVRQKGSLSFGGVKDITDSLKRLEIGSSLNIMELLAVSSVL 96
Query: 73 R-AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
A E +EL DSL LLE L N TE++ CI + + D A
Sbjct: 97 TVAARAKSYGRREESELPDDSLDEMFRLLEPLTPVN--TEIKR----CILSEDEVS-DDA 149
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S L +R + K R L+S+L + A +IT R R C+ +KA HK
Sbjct: 150 SPGLRQVRRQMKVINDRIHTQLNSVLNSSRTYLQDA------VITMRDGRYCLPVKAEHK 203
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P G+ + S++G+T F+EP + NN L E E +L L++++
Sbjct: 204 NQVP-GMVHDQSATGSTVFIEPMAVIRLNNEMRELEIQEKREIEFVLMALSSQLVPYTET 262
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + + +D FA+A ++ + P +++ + INI+ +HPLL
Sbjct: 263 LAENLSILARLDFIFAKASLSRHFNCTEPKFNNRRY------INIKDGRHPLL------- 309
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+P K VPI+I + ++++TGPNTGGKT S
Sbjct: 310 --------DPKKV--------------------VPINIYLGDSFDLLIVTGPNTGGKTVS 341
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM +AGL++PA + L FD + ADIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 342 LKTVGLFTLMGQAGLHIPAFDGSELAVFDNVFADIGDEQSIEQSLSTFSAHMTNIVSILN 401
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
SL L DE+G+GTDP+EG ALA ++L +L + + TTHY++L + E
Sbjct: 402 EADSNSLCLFDELGAGTDPTEGAALAVAVLTFLHNMQCRTMATTHYSELKVFALTEPGVE 461
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA EFS+ETLRPTYR+L G G SNA I+K +G II+ A++ +E+ +
Sbjct: 462 NACCEFSVETLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEDAKRHIEK-----EDAAF 516
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+L +L E R +E + ++ AEI L + + + + + L K ++ Q+
Sbjct: 517 EDLLANLEESRITIEKEREELSAYKAEIAQLKQRLTQKEERFQDQKERLLEKAREEAQKI 576
Query: 608 LNFAKVQIDTVVQDFENQLRDASA-----DEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
L AK D+ +++ N+L + S +E S ++ + + +P
Sbjct: 577 LQDAKDTADSTIRNI-NKLANQSGAGKELEEQRSKLRNKIKDVDKKLAPKKP----QAPR 631
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
S + + G+ V V S+ K TV +P + VQ G +R V NIR +
Sbjct: 632 KTISPKSLKIGDGVKVLSMNLK-GTVSSLPNAKGDLYVQMGILRSLV---NIRDLELLNE 687
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL------------DLRGMR 770
+ + P + + S ++G + +S++ + +L G+
Sbjct: 688 SSISGPGLEIHGGLNGAGKKAGSSMRTPGAFGKKGGSSQSGIKMSKSFSVSPEINLIGLT 747
Query: 771 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
V+EA +LD L A + V+HG GTG ++ V H R KY +E
Sbjct: 748 VDEAVPELDKYLDDAYLAHLPQVRVVHGRGTGALRAGV----HQHLRRLKYVKE 797
>gi|52140954|ref|YP_085875.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus E33L]
gi|196042123|ref|ZP_03109407.1| MutS2 family protein [Bacillus cereus NVH0597-99]
gi|228948276|ref|ZP_04110559.1| hypothetical protein bthur0007_44020 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229124117|ref|ZP_04253309.1| hypothetical protein bcere0016_44020 [Bacillus cereus 95/8201]
gi|81685978|sp|Q633P2.1|MUTS2_BACCZ RecName: Full=MutS2 protein
gi|51974423|gb|AAU15973.1| DNA mismatch repair protein, MutS family [Bacillus cereus E33L]
gi|196027059|gb|EDX65682.1| MutS2 family protein [Bacillus cereus NVH0597-99]
gi|228659419|gb|EEL15067.1| hypothetical protein bcere0016_44020 [Bacillus cereus 95/8201]
gi|228811263|gb|EEM57601.1| hypothetical protein bthur0007_44020 [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 786
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 237/835 (28%), Positives = 391/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|313887962|ref|ZP_07821641.1| recombination and DNA strand exchange inhibitor protein
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846128|gb|EFR33510.1| recombination and DNA strand exchange inhibitor protein
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 791
Score = 263 bits (673), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 235/837 (28%), Positives = 399/837 (47%), Gaps = 92/837 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
Q+ E + LN+T+ AL ++ + +P L I DI I+ G L+ +
Sbjct: 36 QVEISTQYEVVKNRLNETNEALKLIIAKGEP-QLFGIVDIRSIIKRTEIGGALTAGGLLQ 94
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
V LR V+ K + + D + + +L+++ LE++I I + I
Sbjct: 95 VSDFLR-VSRGLKTYLKKDSYNSDEEVKLEYIDKLIEDLYTDKRLEDEINSKIISEEEIA 153
Query: 128 LDRASEDLELIR---AERKRNMEN-LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
D AS +L IR +K +++N L+ +L A + ++T R R V +K
Sbjct: 154 -DDASRELLRIRRGIVAKKDSIKNKLNGILSS------HADFLQDAIVTLRDGRYVVPVK 206
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
+K + G+ ++S SG T ++EP VE NN L E E IL L+ + +
Sbjct: 207 IENKSRVK-GLVHDISGSGQTAYIEPMAVVEANNDLKELYIKENLEIEKILKELSELVGE 265
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
+ EIK ++++E+D FA+A P L+ + IN+ HP L
Sbjct: 266 TSEEIKSNQEKLIELDFIFAKARLGLNYRANMPKLNREGR------INLIKAYHPFL--- 316
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+ I+ VPIDI + + +++TGPNTGG
Sbjct: 317 -----------------------------DRKIA---VPIDINLGIDFTSLIVTGPNTGG 344
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KT+GL +LM++ GL +PA + F+ + ADIGD QS+EQ+LSTFS H+ IV
Sbjct: 345 KTVSIKTVGLLTLMTQFGLLIPADEASEIAVFEKVFADIGDEQSIEQSLSTFSSHMVNIV 404
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
IL+ V+ SLVL DE+G+GTDP+EG ALA SI+ ++ +R + T+HY L
Sbjct: 405 YILKNVTPNSLVLFDELGAGTDPTEGAALARSIMDFMLERKIRCISTSHYNQLKIYALTT 464
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
NA+ EF +++L PTYR+L G G SNA I++ +G +II A+KL+ E +
Sbjct: 465 DGVANASMEFDVDSLSPTYRLLIGVPGKSNAFEISRRLGLPDEIIGEAKKLLSSENIEFE 524
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
++ QS+ E+R K+ A++ + ++ + K L+ + + K ++
Sbjct: 525 -----DVLQSIDEDRTKIREYREELEREKADLEKENKRLQSKIKKLEDQKEKILEKSREE 579
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
++ L K +D ++ + N+ RD + E + I+E++ + ++ R + +++
Sbjct: 580 AKRLLLNTKENVDIILSEI-NEARDKISSENSKKIQEAQDLLRESIKNARDKSELEITKA 638
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
+ G++V SLG+ LATV+E+P VLVQ G M++ + K+++ I + +
Sbjct: 639 ANPIREIKVGDKVRT-SLGN-LATVLELPDKKGNVLVQSGIMKMNMPKDSLTRI-DVQED 695
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL- 782
N R+ K + K+ +D+RG E+A +D L
Sbjct: 696 TTKNNTRRILKN--------------------KATNVKSEIDIRGKNFEDAKDIVDKYLD 735
Query: 783 -ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY---GCTVAYIK 835
A + +IHG GTGV+++++ E RN + Y +++ N G TV +K
Sbjct: 736 DAYLSGLKSVRIIHGKGTGVLRQKLREHFRNVKLIKSY-KDAEYNEGGDGVTVVTLK 791
>gi|229163542|ref|ZP_04291492.1| hypothetical protein bcere0009_43080 [Bacillus cereus R309803]
gi|228619924|gb|EEK76800.1| hypothetical protein bcere0009_43080 [Bacillus cereus R309803]
Length = 786
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 242/837 (28%), Positives = 393/837 (46%), Gaps = 115/837 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDSI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
L E ++ E A +L + L+RE++ + + DR LK + ++ ++++ A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIVEFNEDRDERLLKVQ--KEGEEKVEAA 583
Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
K + + ++Q+ QLR A + + LI+ E A +V+ + N
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633
Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-- 689
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
KQ E + S + S LDLRG R E A +++ L
Sbjct: 690 -----------KQTEKKAVASVKGRDYHVSL---------ELDLRGERFENAMVRVEKYL 729
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 730 DDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|427414052|ref|ZP_18904242.1| MutS2 family protein [Veillonella ratti ACS-216-V-Col6b]
gi|425714832|gb|EKU77834.1| MutS2 family protein [Veillonella ratti ACS-216-V-Col6b]
Length = 791
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 226/763 (29%), Positives = 360/763 (47%), Gaps = 104/763 (13%)
Query: 96 YSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK 154
+ PLL L +++ LE K D K ++D AS L+ +R+ R E + S L+
Sbjct: 110 HYPLLSLWIQDMPRHDGLERKFERVFDKKG-NLMDSASPKLQHLRSTIVRTKERIKSDLQ 168
Query: 155 KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVE 214
+ + ++T+R +R + +K ++Y +G+ + S++GAT ++EP V
Sbjct: 169 AIMHDPNNQKYFQEAIVTQRNNRYVIPVKQEYRYAF-EGLIHDRSATGATLYIEPMRLVN 227
Query: 215 FNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGV 274
NN +E E I L+ + K + +RV ++ + +A A M GV
Sbjct: 228 LNNDLQEAELAEEEEVRRIYRELSQAVRKDSNTLMDACERVSHVEFVYGKANLAIKMKGV 287
Query: 275 CPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSK 334
LS V ++ +HPL+ P+
Sbjct: 288 PAELSGGREVKLLNA------RHPLI----------------PV---------------- 309
Query: 335 GISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPW 394
+ VP I + R+++ITG NTGGKT +MKTLGL SLM++AGL++PA LP
Sbjct: 310 ---NVVVPTTITLGTNYRILLITGSNTGGKTVAMKTLGLLSLMNQAGLFIPADTGSILPI 366
Query: 395 FDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALAT 454
F+ I ADIGD QS+E +LSTFS H++++V IL++ + LVL+DE+GSGTDP EG ALA
Sbjct: 367 FNNIYADIGDEQSIEASLSTFSAHMTQVVKILKVAGAKDLVLLDELGSGTDPEEGSALAV 426
Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
++L+Y R R L +V+THY +L EN EF TLRPTYR+ G G S+A
Sbjct: 427 ALLEYFRKRGPLMMVSTHYNELKRYAYHTDGIENGHVEFDERTLRPTYRLHIGVAGSSHA 486
Query: 515 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS-LMEERRKLESQARTAASLHA 573
L+IA +G R++I A++ E +R E S L E+ RK + + R
Sbjct: 487 LSIAARLGVPREVIDYAKQA-----HEGSANRDMETVLSDLNEQLRKNQERERILKKELD 541
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E + + E E K L+ R + AK + QQ +V+ + ++++ ++Q +A D+
Sbjct: 542 EARRMRTQAEREKKQLNERRKQILAKAQNEAQQLKQSIRVEGEQIIKELKSQFSEADKDK 601
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP------QFGEQVHVKSLGDKLAT 687
+ I ++ I+ + +V E TP + G+ V V SL + + T
Sbjct: 602 RQNAITKARKDISGV----------NVPELERDERTPVNVKELKEGQTVFVVSL-NAVGT 650
Query: 688 VVEVPGDDDTVLVQYGKMRV---------RVKKNNIRPIPNSKRKNAANPAPRLRKQQED 738
V V G V V V R + NN+R +++ A P PR R
Sbjct: 651 VTAVQGKRIQVAVNGLTANVKAADLAVASREETNNLR-----RKETAVQPKPRKR----- 700
Query: 739 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVI 794
+ GS+ E R + + L++ G V+EA SH +D AL S + ++
Sbjct: 701 ----AGGSAVE------RQKHATTELNVIGQTVDEANQNVSHFIDQALMA--GISPVRIV 748
Query: 795 HGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
HG GTG ++ + + L+ P +++YE G T+ Y+K
Sbjct: 749 HGKGTGALRAGIHQYLKTLPHISRYEIAGYDEGGAGATLVYLK 791
>gi|340357348|ref|ZP_08679966.1| DNA mismatch repair protein MutS [Sporosarcina newyorkensis 2681]
gi|339617796|gb|EGQ22410.1| DNA mismatch repair protein MutS [Sporosarcina newyorkensis 2681]
Length = 785
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 247/845 (29%), Positives = 395/845 (46%), Gaps = 111/845 (13%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
Q+ + LE+ Q+LL +T LA+++ + + + I DI A G +LS E+ +
Sbjct: 33 QLTPSRELEDVQRLLEETDEGLALLRIRGNVPMGGIHDIRPHAKRAQIGGMLSAMELVEI 92
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
T+RA + + ++ EA +G+ L+ + LT +E +I ID ++
Sbjct: 93 ADTIRA-SRILRQFLEAVTAEGEI--NIPHLIARKEAMPILTGVEHEINAAIDDNGRVV- 148
Query: 129 DRASEDLELIR----AERKRNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
D AS L IR + R E L+S + K AA++ + ++T R R + +K
Sbjct: 149 DSASSALRSIRQSLRVQESRVRERLESYTRGKNAAKM-----LSDAIVTIRNDRYVIPVK 203
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR-LSNSEIAEETAILSLLTAEIA 242
A ++ G+ ++SSSG T F+EP V+ NN E+R L E E IL L+A +
Sbjct: 204 AEYRSHY-GGVIHDMSSSGQTLFIEPDAVVQANN-EIRSLKVKEQEEIEKILLALSASVR 261
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ ++ L+ + EID+ A+A + P V+ D + + +HPLL
Sbjct: 262 EVAHDLFTLVQLLAEIDVILAKAKYGTANKCTKPA------VNADGYMRLTKARHPLL-- 313
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
P++ V N+ I+ + +VITGPNTG
Sbjct: 314 --------------PIEEAVANT-------------------IEFGQDITTIVITGPNTG 340
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KT+GL +LM+++GL +P + + FD I ADIGD QS+EQ+LSTFS H+ I
Sbjct: 341 GKTVTLKTVGLCTLMAQSGLPIPVLDGSEIAVFDSIYADIGDEQSIEQSLSTFSSHMVNI 400
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
VDIL+ SL+L DE+GSGTDP EG ALA SIL + + TTHY +L
Sbjct: 401 VDILKKFDDRSLLLFDELGSGTDPQEGAALAISILDEVHGSGARVMATTHYPELKAYGYN 460
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
NA+ EF ++TL PTYR+L G G SNA I+K +G II RA+ R E
Sbjct: 461 RPGVANASVEFDIDTLSPTYRLLIGVPGRSNAFEISKRLGLHNHIIDRAKGFTGEDRGE- 519
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
+ SL R + E A L E L +E+ + + + + L +
Sbjct: 520 ----VDSMIASLETSRVQSEKDAERTHDLLLETEQLKKELNAKLAEFEEQKERLTEAAKE 575
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR------PDD 656
+ ++ + AK + + V+ D +A A +KE E ++EA + P +
Sbjct: 576 RAKKIVEKAKSESEAVISDLRALRMNAGAS-----VKEHE-----LIEARKRLESATPAE 625
Query: 657 DFSVSETNTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
+ ++ P Q G++V V + G K T+VE D + V V+ G +++++ + +
Sbjct: 626 KKKKAIKAKAAPRPLQKGDEVKVLAYGQK-GTLVEKVSDKEWV-VEIGILKMKLPELGLE 683
Query: 716 PI-PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
+ P ++K + A R R SG K LDLRG R E+A
Sbjct: 684 YVKPEKEKKQVTSAAVRGR-------SGHV----------------KLELDLRGERYEDA 720
Query: 775 SHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCT 830
+ + I A + + +IHG GTG +++ V + L+ H RV Y + +G T
Sbjct: 721 IARTEKYIDDALLSNYHQVSIIHGKGTGALQKGVQQYLKKHSRVNSYRFGEAGEGGHGVT 780
Query: 831 VAYIK 835
+ +K
Sbjct: 781 IVELK 785
>gi|379011153|ref|YP_005268965.1| MutS-like protein [Acetobacterium woodii DSM 1030]
gi|375301942|gb|AFA48076.1| MutS-like protein [Acetobacterium woodii DSM 1030]
Length = 789
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 246/843 (29%), Positives = 389/843 (46%), Gaps = 113/843 (13%)
Query: 7 QKAQIPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSE 64
Q Q+ ++L + L+ T+ +L MM +P LS + + + + A G +LS E
Sbjct: 30 QAGQLLPLETLTAVNRSLDLTNESLGMMLRNGRP-PLSDVPNTSDYVKRAAIGSMLSMKE 88
Query: 65 ICAVRRTLRA---VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
+ A+ LR ++N + T+ D+L L L+ C ELE++I
Sbjct: 89 LLAIATLLRISRDMDNYYHGDTQM-----DTLILLKDLFTSLETCE---ELEKEIS---- 136
Query: 122 CKLL---IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
K+L + D AS +L IR E + + + L + + + + ++T R +R
Sbjct: 137 RKILGPEEMADNASRELSRIRREMQFKYKRISEKLNHMISSTSYDKMLQEKIVTIRNNRY 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
+ +K ++ +P GI L+ S+SGAT F+EP VE NN L E E IL L+
Sbjct: 197 VIPVKQEYRSQVP-GIVLDKSASGATLFIEPIAVVELNNDIKILVAEEEQEIVRILKELS 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
+A EI D ++++D FA+ + ++GV ++ VS I + KHP
Sbjct: 256 QNVADQRDEIICNYDILIDLDFQFAKGKYGLAINGV------KTDVSETGRIALLRAKHP 309
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
L+ P E V S DI E E +VITG
Sbjct: 310 LI----------------P-------DEQVVAS------------DIYFEEEIDTMVITG 334
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT S+KT+GL +LM ++GL++P + + F I ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTVSLKTIGLLNLMVQSGLFIPVREGSKTRIFTNIFADIGDEQSIEQNLSTFSSH 394
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV+I+ +SLVL DE+G+GTDP+EG ALA SIL L R ++ TTHY++L
Sbjct: 395 MTNIVEIMNKADHDSLVLFDELGAGTDPTEGAALAISILNALHLRHVTSISTTHYSELKE 454
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
NA+ EF ++TLRPTYR+L G G SNA IA +G +I+ A++L++
Sbjct: 455 FALVTPGVVNASVEFDIKTLRPTYRLLIGVPGKSNAFEIAVRLGLAETVIENAKELIKN- 513
Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
+ R E + E+RR+ E++ L + +L R+++ E + D L A
Sbjct: 514 ----EAIRFEETLIKIDEKRRRTEAEHDAIIRLKRDTEELKRQMDREKERFDEEKQVLIA 569
Query: 599 KE-------TQQVQQELNFAKVQIDTVVQDFENQLRDASADE-INSLIKESESAIAAIVE 650
K ++ ++E +I T+ + N ++D E I IKE E I
Sbjct: 570 KAQEEAMEIVKKTREETEAIYREIRTIQETTTNAVKDNKELEAIRKRIKEKEKNIY---- 625
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
QFG Q + G L DD ++ ++ +R +
Sbjct: 626 --------------------QFGNQPK-EYQGQALEM------DDISIGMKVYINSLRRE 658
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQED--RQSGSAGSSNEEASYGP-RVQTSKNSLDLR 767
I+ IPN + + +L+ D R A ++ +Y + LDLR
Sbjct: 659 GEVIKLIPNENKAMVQSEMIKLKVAVGDLARSVALAKPQEKKVTYKKVERHVMETKLDLR 718
Query: 768 GMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 825
G EE+ +D I A + ++HG GTG +++ + E L+ +P + + + M
Sbjct: 719 GKNGEESLFLVDKMIGDAMLSGNKQIVIVHGKGTGRLRQIIHEYLKGNPLIEDF-RLGAM 777
Query: 826 NYG 828
N G
Sbjct: 778 NEG 780
>gi|363892244|ref|ZP_09319412.1| MutS2 family protein [Eubacteriaceae bacterium CM2]
gi|361964194|gb|EHL17238.1| MutS2 family protein [Eubacteriaceae bacterium CM2]
Length = 785
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 212/729 (29%), Positives = 348/729 (47%), Gaps = 105/729 (14%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS DL IR + +N+ + L + + + + ++T R R V +K+ +
Sbjct: 142 ISDDASVDLRRIRRQINSEKQNIKNKLNEFVSSSKYSKILQDSVVTMRNERFVVPVKSEN 201
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ P GI + SSSGAT F+EP V NN L E E IL+ LT+ + +
Sbjct: 202 RADFP-GIVHDTSSSGATMFIEPMAIVNMNNRLSTLKQEEHKEIERILAYLTSLVGEYCE 260
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+I + D + ++D A+ + M+ + P ++ + ++ ++ +HPL+
Sbjct: 261 DISHNCDILEQLDFIMAKGKLSVEMNAIEPKINDRKYIKLINA------RHPLIE----- 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
K V +S + +G E ++ITGPNTGGKT
Sbjct: 310 ------------KDKVVSSTIILGG------------------EYSTLIITGPNTGGKTV 339
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL SLM +AGL++P + FD + ADIGD QS++Q+LSTFS H++ IV I+
Sbjct: 340 TLKTLGLCSLMFQAGLHIPCDLESTICIFDNVFADIGDEQSIQQSLSTFSAHMTNIVYIM 399
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ V SLVL DE+G+GTDP EG LA SIL+ L+ + L V TTHY++L
Sbjct: 400 DNVGNNSLVLFDELGAGTDPIEGAGLAVSILETLKSKNILTVATTHYSELKNYALTQENV 459
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK-----------LV 535
NA+ EF + TL PTY++L G G SNA I+K +G +II A++ ++
Sbjct: 460 TNASVEFDINTLSPTYKLLIGVPGKSNAFEISKKLGLSEEIINSAKEHIKTDSIQMEDVI 519
Query: 536 ERLRPERQQH-RKSELYQSLMEE----RRKLESQARTAASLHAEIMDLYREIEDEAKDLD 590
+L R + +K E Q +E+ R KLE++ + + ++ IED AK+
Sbjct: 520 SKLEKIRTDYEKKQEELQKELEDVKYIRLKLENKEQRQKEQNKKL------IED-AKEKA 572
Query: 591 RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 650
R+ E + + LN K++ + ++ + Q+ + + K ++S I +
Sbjct: 573 RKLIEDAKSEADIISKNLN--KIKNSSDYKNIDRQMNELKTNINKYKEKYAKSKEELIAK 630
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
+ +P ++ +V G+ V+V S K A V+ V D VL++ G +++ VK
Sbjct: 631 SSKPLENINV------------GDIVYVNSFA-KNAKVLSVDDAKDEVLIELGAIKMTVK 677
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
K N+ K K + L + +T++ S+DLRGM
Sbjct: 678 KENLSTQEKIKEKKSTKAGKILTN---------------------KTKTAQTSVDLRGMD 716
Query: 771 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMN 826
+E A ++D I + S + +IHG+GT V+K+ + L+ H + + Q
Sbjct: 717 LETAILEVDKYIDNSYLAGLSEVTIIHGVGTLVLKKGLQSYLKKHKHIKSFRDGQYGEGG 776
Query: 827 YGCTVAYIK 835
G TVA +K
Sbjct: 777 MGVTVATLK 785
>gi|443632188|ref|ZP_21116368.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
gi|443348303|gb|ELS62360.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. inaquosorum KCTC 13429]
Length = 785
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 244/833 (29%), Positives = 399/833 (47%), Gaps = 99/833 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
S++E +K L++ A A+++ + + DI G L A G +LSPSE + L A
Sbjct: 39 SIDEIKKQLDEVDEASAIIRLRGQAPFGGLTDIRGALRRAEIGSVLSPSEFTEISGLLYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V + +++ AE DG + PL+ + + L++LE I CID + LD AS
Sbjct: 99 VKQMKHFISQMAE-DGVDI----PLIHQHAEQLITLSDLERDINSCIDDHGEV-LDHASG 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + K R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 153 TLRGIRTQLKTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSGAT F+EP+ V+ NN + E E IL +LT A+ E+
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRVLTEHTAEHTEELF 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + +D FA+A +A+ + PI++ V + +HPLL
Sbjct: 268 QDLQVLQTLDFIFAKARYAKAVKATKPIVNDNGFVRLKKA------RHPLL--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P V N DI++ + +VITGPNTGGKT ++K
Sbjct: 313 -------PPDQVVAN-------------------DIELGGDFSTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL +LM+++GL++PA F+ + ADIGD QS+EQ+LSTFS H+ IVDILE V
Sbjct: 347 TLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVDILEHV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA
Sbjct: 407 NENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYNREGVMNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF +ETL PTY++L G G SNA I+K +G II +A+ + + +
Sbjct: 467 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEM-----TAEHNEVDT 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL + +++ E + S+ E L++E++ + +L+ + + + QQ +++
Sbjct: 522 MIASLEQSKKRAEEELSETESIRKEAEKLHKELQQQIIELNSKKDKMLEEAEQQAAEKVK 581
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
A + + ++ + + + + + + LI ++ + V +T F
Sbjct: 582 AATKEAEDIIHELRSIKEEHKSFKDHELIN-AKKRLEGAVPTFEKSKKPEKPKTQKRDFK 640
Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 729
P G++V V + G K T++E G ++ VQ G ++++VK+ ++ I ++ P
Sbjct: 641 P--GDEVKVLTFGQK-GTLLEKTGGNEWN-VQIGILKMKVKEKDLEFIKSA-------PE 689
Query: 730 PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALAC 784
P+ K A G S LDLRG R E A ++ D LA
Sbjct: 690 PKKEKII-------------TAVKGKDYHVSLE-LDLRGERYENALSRVEKYLDDAVLAG 735
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
+ S +IHG GTG +++ V ++L+NH V +++ + G TV +K
Sbjct: 736 YPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTVVELK 785
>gi|334188381|ref|NP_200220.2| DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]
gi|332009066|gb|AED96449.1| DNA mismatch repair protein MutS, type 2 [Arabidopsis thaliana]
Length = 796
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 239/770 (31%), Positives = 374/770 (48%), Gaps = 103/770 (13%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIED--IAGILNSAVS 56
+G +K +S ES KLL++T AA+ M++ S LDLS+I + + A
Sbjct: 72 LGREATKKKLWSLDQSFSESLKLLDETDAAIKMLEHGSFCLDLSSIHISLVESGIRHAKR 131
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLK----NCNFLTEL 112
L + V LR N+ L A + DGD +R+ PL EL+ N +F+ +
Sbjct: 132 RLSLRADQALEVASLLRFFENLQLDLKAAIKQDGDWYKRFMPLSELIVHPVINRSFVKLV 191
Query: 113 EEKI---GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKP 169
E+ I G I D AS L R R+R ++ L+ L+++ I ++ D+
Sbjct: 192 EQVIDPDG--------TIKDSASSAL---RQSRER-VQTLERKLQQLLDAIIRSQKDDES 239
Query: 170 LITKRR--SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
++ R C I+ S L L S SG EP AV N+ +++ + + +
Sbjct: 240 VMLAAEIDGRWC--IQMSSNQLTSVNGLLLSSGSGGGTAAEPIAAVSMND-DLQSARASV 296
Query: 228 AE-ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP--ILSSQSHV 284
A+ E ILS+LT ++ +I+ ++ +++D+ ARA +++ G P L + V
Sbjct: 297 AKAEAEILSMLTEKMQDGLCQIEVVLSYSIQLDVINARATYSRAYGGAHPDIYLPPEDEV 356
Query: 285 SFDSS------INIEGIK---------------HPLLLGSSLRSLSAASSNSNPLKSDVE 323
S+ IN+ K HPLLL + + K
Sbjct: 357 ESLSAGENSPDINLPSEKPLSKKEWLLYLPRCYHPLLLYQHKKGIRKTRETVKFHK---- 412
Query: 324 NSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLY 383
T ++ G P+P D ++ TRV+VITGPNTGGKT +K++GLA++M+K+GLY
Sbjct: 413 ----TADTVLSGAP--PIPADFQISKGTRVLVITGPNTGGKTICLKSVGLAAMMAKSGLY 466
Query: 384 LPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSG 443
+ A R+PWFD I ADIGD QSL Q+LSTFSGH+ +I +IL + SLVL+DE+G+G
Sbjct: 467 VLATESARIPWFDNIYADIGDEQSLLQSLSTFSGHLKQISEILSHSTSRSLVLLDEVGAG 526
Query: 444 TDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
T+P EG AL +IL+ + L + TTH+ +L LK ++ FENA EF L+PTY
Sbjct: 527 TNPLEGAALGMAILESFAESGSLLTMATTHHGELKTLKYSNSAFENACMEFDDLNLKPTY 586
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ-----HRKSELYQSLMEE 557
+ILWG G SNA+NIA +G II+ A++L E + R + YQ L+ E
Sbjct: 587 KILWGVPGRSNAINIADRLGLPCDIIESARELYGSASAEINEVILDMERYKQEYQRLLNE 646
Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
R R + LH ++ + I D + KE ++++QEL A +
Sbjct: 647 SR---VYIRLSRELHENLLTAQKNINDHS-----------TKERRKMRQELTQAGSMTRS 692
Query: 618 VVQDFENQLRDASADEINSLIKESESAIAAIVEAH---RPDDDFSVSETNT--------- 665
++ Q R ++ K S+S +A ++ D+D + ++
Sbjct: 693 TLRRTLQQFRSSAG-------KSSQSKVATQLQTKVKTTKDEDNGIRSSSVVERRPLPEA 745
Query: 666 -SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
+ P+ G V V SLG K ATV++V +LVQ G M+++VK ++
Sbjct: 746 AAQKVPEVGSSVFVSSLGKK-ATVLKVEHSKKEILVQVGIMKMKVKLTDV 794
>gi|229169279|ref|ZP_04296990.1| hypothetical protein bcere0007_42300 [Bacillus cereus AH621]
gi|228614174|gb|EEK71288.1| hypothetical protein bcere0007_42300 [Bacillus cereus AH621]
Length = 786
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 234/797 (29%), Positives = 378/797 (47%), Gaps = 111/797 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
I+K +G ++I RA+ + + + E + E ++ ER++ E + + LH
Sbjct: 493 EISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAESERKEAEEHRKQSEKLHR 552
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 553 ELQRQIIEFNDE-----RDEKLLKAQ--KEGEEKIEAAKKEAEGIIHEL-RQLRKAQLVN 604
Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDK 684
+ + LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFGQK 655
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
+ +V D VQ G ++++VK++++ I KQ E + S
Sbjct: 656 GQLLKKVS--DTEWSVQIGILKMKVKESDMEYINTP-------------KQTEKKAVASV 700
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
+ S LDLRG R E+A +++ L A S + +IHG GTG +
Sbjct: 701 KGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGAL 751
Query: 803 KERVLEILRNHPRVAKY 819
++ V + L+ H V Y
Sbjct: 752 RQGVQDYLKKHRGVKTY 768
>gi|291087888|ref|ZP_06347777.2| MutS2 protein [Clostridium sp. M62/1]
gi|291073610|gb|EFE10974.1| MutS2 family protein [Clostridium sp. M62/1]
Length = 818
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 246/835 (29%), Positives = 386/835 (46%), Gaps = 102/835 (12%)
Query: 16 SLEESQKLLNQ---TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S + S+ + NQ T A + Q L ++DI L G L+ E+ AV L
Sbjct: 39 SCDYSEIVQNQQETTDAVTRVRQKGSLSFGGLKDITDSLKRLEIGSSLNIVELLAVSSVL 98
Query: 73 R-AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
A E +EL DSL LLE L N TE++ CI + + D A
Sbjct: 99 TVAARAKSYGRREESELPDDSLDEMFRLLEPLTPVN--TEIKR----CILSEDEVS-DDA 151
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S L +R + K R L+S+L + A +IT R R C+ +KA HK
Sbjct: 152 SPGLRQVRRQMKVINDRIHTQLNSVLNSSRTYLQDA------VITMRDGRYCLPVKAEHK 205
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P G+ + S++G+T F+EP + NN L E E +L L++++
Sbjct: 206 NQVP-GMVHDQSATGSTVFIEPMAVIRLNNEMRELEIQEKREIEFVLMALSSQLVPYTET 264
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + + +D FA+A ++ + P +++ + INI+ +HPLL
Sbjct: 265 LAENLSILARLDFIFAKASLSRHFNCTEPKFNNRRY------INIKDGRHPLL------- 311
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+P K VPI+I + ++++TGPNTGGKT S
Sbjct: 312 --------DPKKV--------------------VPINIYLGDSFDLLIVTGPNTGGKTVS 343
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM +AGL++PA + L FD + ADIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 344 LKTVGLFTLMGQAGLHIPAFDGSELAVFDNVFADIGDEQSIEQSLSTFSAHMTNIVSILN 403
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
SL L DE+G+GTDP+EG ALA ++L +L + + TTHY++L + E
Sbjct: 404 EADSNSLCLFDELGAGTDPTEGAALAVAVLTFLHNMQCRTMATTHYSELKVFALTEPGVE 463
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA EFS+ETLRPTYR+L G G SNA I+K +G II+ A++ +E+ +
Sbjct: 464 NACCEFSVETLRPTYRLLIGIPGKSNAFAISKKLGLPDYIIEDAKRHIEK-----EDAAF 518
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+L +L E R +E + ++ AEI L + + + + + L K ++ Q+
Sbjct: 519 EDLLANLEESRITIEKEREELSAYKAEIAQLKQRLTQKEERFQDQKERLLEKAREEAQKI 578
Query: 608 LNFAKVQIDTVVQDFENQLRDASA-----DEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
L AK D+ +++ N+L + S +E S ++ + + +P
Sbjct: 579 LQDAKDTADSTIRNI-NKLANQSGAGKELEEQRSKLRNKIKDVDKKLAPKKP----QAPR 633
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI----- 717
S + + G+ V V S+ K TV +P + VQ G +R V NIR +
Sbjct: 634 KTISPKSLKIGDGVKVLSMNLK-GTVSSLPNAKGDLYVQMGILRSLV---NIRDLELLNE 689
Query: 718 -----PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN---SLDLRGM 769
P + N A + + R G+ G + G ++ S + ++L G+
Sbjct: 690 SSISGPGLESHGGLNGAGK-KAGSPMRTPGAFGKKGGSSQSGIKMSKSFSVSPEINLIGL 748
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
V+EA +LD L A + V+HG GTG ++ V H R KY +E
Sbjct: 749 TVDEAVPELDKYLDDAYLAHLPQVRVVHGRGTGALRAGV----HQHLRRLKYVKE 799
>gi|301056059|ref|YP_003794270.1| MutS family DNA mismatch repair protein [Bacillus cereus biovar
anthracis str. CI]
gi|423549710|ref|ZP_17526037.1| MutS2 protein [Bacillus cereus ISP3191]
gi|300378228|gb|ADK07132.1| DNA mismatch repair protein, MutS family [Bacillus cereus biovar
anthracis str. CI]
gi|401190506|gb|EJQ97548.1| MutS2 protein [Bacillus cereus ISP3191]
Length = 786
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 237/835 (28%), Positives = 391/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 IVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|375091463|ref|ZP_09737753.1| MutS2 family protein [Helcococcus kunzii ATCC 51366]
gi|374563326|gb|EHR34645.1| MutS2 family protein [Helcococcus kunzii ATCC 51366]
Length = 785
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 213/713 (29%), Positives = 344/713 (48%), Gaps = 108/713 (15%)
Query: 127 ILDRASEDLELIRAERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
I D AS+ L IR + E L+SL+K + Q G IT R R V +
Sbjct: 143 IADDASKTLFNIRKSIREKTEEARKKLNSLVKDDTTNL-QDG-----FITMRDGRYVVPV 196
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K K +P GI +VSSSG T ++EP VE NN L E E IL L+ I
Sbjct: 197 KTGAKSKVP-GITHDVSSSGQTLYIEPMVIVEINNKIRDLEIEEYEEIRKILKDLSEMIF 255
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
EI+ ++++D FA+A +A PIL+ + I+I+ KHPLL G
Sbjct: 256 NYHEEIENNQYLLVDLDFTFAKAKYALEKGHTKPILNDEK------IIDIKNAKHPLLKG 309
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
VPID+K+ +VITGPNTG
Sbjct: 310 K------------------------------------IVPIDVKIGENYNALVITGPNTG 333
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT S+KT+GL M++AGL++P ++ F+ + ADIGD+QS+EQ+LSTFS ++ I
Sbjct: 334 GKTVSLKTVGLVVFMAQAGLFVPCDEFSKVAVFNDVFADIGDNQSIEQSLSTFSASMTNI 393
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V+IL + +SLVL DE+G+GTDP+EG ALA +I+ L R + + TTHY++L
Sbjct: 394 VNILNKANDKSLVLFDELGNGTDPTEGAALAMAIIDTLVKRESILLSTTHYSELKLYAMS 453
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
+NA EF +ETL PTY++ G G SNA I++ +G I+ A++ + +
Sbjct: 454 TEGVQNANVEFDIETLSPTYKLTIGRPGKSNAFEISRRLGLFEDILFDAKQYISK----- 508
Query: 543 QQHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
++R E + + +++ +L++Q + ++ E + + I+D D+ +R
Sbjct: 509 -ENRDFEDIIAEIEDDKSRLDNQ---LSEVNKEKLRYQKLIDDFNNDVGKRR-------- 556
Query: 602 QQVQQELNFAKVQIDTVVQDFENQ----LRDASADEINSLIKESESAIAAIVEAHRPDDD 657
++ ++++ AK + ++ D +N+ LR A + + S ++ + A + I E ++ ++
Sbjct: 557 EKAEKDIEKAKEEAKKILYDAKNKSKELLRIAKSQKGRSESRDIDRAYSEINEKYKEENK 616
Query: 658 F-----SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+ N + GE V V S+G +L V +P + V VQ G ++ V
Sbjct: 617 RYETKPKQTRKNNKIIDVKLGETVKVLSMGGELGVVQTLPDNKGEVTVQMGILKFTV--- 673
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
NIR L K Q + + + SS ++ ++ +K LD+RG+ VE
Sbjct: 674 NIRD---------------LEKTQSEIEKEKSKSSYKQVMRNTAMKQAKQELDVRGLNVE 718
Query: 773 EASHQLDIALACWESRSVLF------VIHGMGTGVVKERVLEILRNHPRVAKY 819
EA I + + S+LF +IHG GTG ++ + + R V ++
Sbjct: 719 EAI----IEIEKFFDDSILFGLKRVEIIHGKGTGALRAGLTDFFRKSKYVDEF 767
>gi|229175259|ref|ZP_04302774.1| hypothetical protein bcere0006_43390 [Bacillus cereus MM3]
gi|228608091|gb|EEK65398.1| hypothetical protein bcere0006_43390 [Bacillus cereus MM3]
Length = 786
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 238/835 (28%), Positives = 391/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIISLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREKVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVINQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++++ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIREL-RQLRKAQLINVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + S + S LDLRG R E+A +++ L
Sbjct: 690 ---------KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNFRYGDMGEGGLGVTVVELK 786
>gi|414084421|ref|YP_006993129.1| mutS2 family protein [Carnobacterium maltaromaticum LMA28]
gi|412998005|emb|CCO11814.1| mutS2 family protein [Carnobacterium maltaromaticum LMA28]
Length = 788
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 239/796 (30%), Positives = 374/796 (46%), Gaps = 107/796 (13%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G +L+ EI + + LR V + + +E+ G L R L EL+ L L + I
Sbjct: 81 GAMLNGIEIAQIGKVLRTTTEVTRFFDDLSEI-GVELFR---LYELVAKLVTLPTLNQMI 136
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQIFQAGGIDKPLIT 172
ID + +D AS+ L+ IR KR+ N LDSL++ AQ + L+T
Sbjct: 137 REAIDEDGHV-MDDASQALKGIRTGMKRSESNIREKLDSLIRGKNAQY-----LSDALVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + +KA ++ G+ + SS+G T F+EP+ V+ NN +L E E
Sbjct: 191 MRNDRYVIPVKAEYRNHF-GGVVHDQSSTGQTLFIEPQSVVDLNNKLRQLQIEERQEIDR 249
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL+ L+ EIA EI M + ++D A+A + + + P+++ ++ V F +
Sbjct: 250 ILAELSNEIAPYGAEILNNMFLLGKLDFIGAKAAYGKNIKATRPLVNEENDVRFIQA--- 306
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+HPL+ K V N DI + + +
Sbjct: 307 ---RHPLI----------------DEKQAVAN-------------------DILIGGDYQ 328
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
+VITGPNTGGKT ++KTLGL LM ++GL LP ++ F + ADIGD QS+EQ+L
Sbjct: 329 ALVITGPNTGGKTITLKTLGLLQLMGQSGLQLPVAEGSQMGIFTEVFADIGDEQSIEQSL 388
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG----LAV 468
STFS H++ IV IL + +SL+L DE+G+GTDP EG ALA +IL D+VG +
Sbjct: 389 STFSSHMTNIVSILNKIDDKSLILFDELGAGTDPQEGAALAIAIL----DQVGAVGSYVM 444
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY +L NA+ EF +ETL PTYR+L G G SNA I+K +G D +I
Sbjct: 445 ATTHYPELKAYGYNRPGTINASMEFDVETLSPTYRLLIGVPGRSNAFEISKRLGLDTAVI 504
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
A+ L+ + + +E+ L R+ E + E LY+++ +
Sbjct: 505 DSARSLI-----DGESQNLNEMIADLENRRKMTEMEYHEVRQYVEEAETLYQDLTTALEQ 559
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESE--SAI 645
L K ++ Q ++ A+ + +V D QL + IKE E A
Sbjct: 560 FFGEREDLVKKAREKANQIVSEAEEEASKIVSDLRKMQL----TGQFEGGIKEHELIDAK 615
Query: 646 AAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
+ + H + V + + + G++V V S G + + +V G++ LVQ G
Sbjct: 616 SKLANLHHEETLTKNKVLKKAKAKQQFKKGDEVIVASYGQRGTLMEKVEGNN--WLVQLG 673
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
+++++K++++ A P K+ + + SSN+ V T
Sbjct: 674 ILKMKIKESDM---------TLAQP----EKEPTRKMVATVRSSND-----SHVST---Q 712
Query: 764 LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 821
LDLRG R E A ++D L A + ++HG GTG +++ V E L+NH V K+E
Sbjct: 713 LDLRGERYESALSEMDQYLDAALLAGYPQVTIVHGKGTGALRQGVTEALKNHRSVKKFET 772
Query: 822 ESPMNY---GCTVAYI 834
+P N G T+ Y
Sbjct: 773 -APQNQGGNGATIVYF 787
>gi|257867419|ref|ZP_05647072.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC30]
gi|257873749|ref|ZP_05653402.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC10]
gi|257801475|gb|EEV30405.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC30]
gi|257807913|gb|EEV36735.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC10]
Length = 787
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 220/726 (30%), Positives = 352/726 (48%), Gaps = 106/726 (14%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS L IR +R E LD +++ A+ + ++T R R + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 239
K ++ + G+ + SSSG T F+EPK VE NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILAELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+A +REI + + +D A+A F + M + P ++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + E + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKEYQAVVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL +M +AGL + A+ ++ F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGVFNEIFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ IV++L+ V SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TTIVEVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
+ NA+ EF ++TL PTYR+L G G SNA I+K +G II +A++++
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPDTIIDQAKEIM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYRE-IEDEAKDLDR 591
+ + +E+ L R+ E++ + AA LH E+ Y E+ K+L
Sbjct: 512 -DGESQDLNEMIADLENRRKMTETEYLEVRHHVKEAARLHQELEAAYSYFFEEREKEL-- 568
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVE 650
AK Q+ Q + AK + + ++ D QL + ++ + ++ + +
Sbjct: 569 ------AKARQKANQIVEEAKEESEKIIADIRKMQLAGGQTKVKEHELIDARTKLSGLQQ 622
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
+ V + ++ T + G++V V S G + +++ G + VQ G +++ +
Sbjct: 623 EEHLQKN-KVLQKAKAAKTLKEGDEVLVTSYGQR-GVLLKKAGKNQW-QVQIGILKMNLP 679
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
+ +++P K P R+ ++ A P V N LDLRG R
Sbjct: 680 ETDLQPAAPVK-----EPTQRIV------------NTIRSADSSPVV----NQLDLRGKR 718
Query: 771 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
EEA +++D L A + ++HG GTG +++ + + L+NH V +E +P N G
Sbjct: 719 YEEALNEVDQYLDAAILAGYPQVTIVHGKGTGALRQGITDYLKNHRSVKSFE-FAPANQG 777
Query: 829 CTVAYI 834
A I
Sbjct: 778 GNGATI 783
>gi|373465637|ref|ZP_09557092.1| MutS2 family protein [Lactobacillus kisonensis F0435]
gi|371759887|gb|EHO48594.1| MutS2 family protein [Lactobacillus kisonensis F0435]
Length = 787
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 214/718 (29%), Positives = 341/718 (47%), Gaps = 109/718 (15%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+LD AS +L IR R ++ + + K + A + +P+IT R R + I+A +
Sbjct: 147 VLDSASSELRAIRKSISRTQTDIRTKMGKFI-KGSDAKYLSEPIITVRDDRFVLPIRADY 205
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K GI + S+SG T ++EP VE NN R +E AE IL LT +
Sbjct: 206 KQHF-GGIVHDQSASGQTLYVEPSNVVEMNNQLRRDQLAERAEVRRILGELTNLLRPYRN 264
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
E+ M+ V ++D A+A +A + P +S D+ +N+ +HP++
Sbjct: 265 ELMTNMNLVGQLDFVNAKAKYAHQTGSIQP------RISKDNVVNLRKARHPMI------ 312
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
D V DI++ + +++TGPNTGGKT
Sbjct: 313 -----------------------------DRDKVVANDIEIGDKYSTIIVTGPNTGGKTI 343
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
+MKT+GL LM ++GL++ A ++ FD + ADIGD QS+E NLSTFS H+ I+ +L
Sbjct: 344 TMKTIGLLQLMGQSGLFITANEDSQIGAFDEVFADIGDEQSIEANLSTFSSHMDNIISML 403
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ +S SLVL+DE+G+GTDP EG ALA +I+ + + TTHY +L +
Sbjct: 404 DKISNNSLVLLDELGAGTDPKEGAALAMAIIDAIHATGCELIATTHYPELKAFAYNRSGI 463
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NA+ EF + TLRPTYR L G G SNALNIA+ +GF ++II A+ + + + +
Sbjct: 464 INASMEFDVNTLRPTYRFLMGIPGQSNALNIAQKLGFPKQIIDNARSFTDS-KNQDINNM 522
Query: 547 KSEL---YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
+EL + +E +L+ Q + LH E+ + + + + + DR + K +
Sbjct: 523 IAELTAQTKRAHDEADQLQKQLAESTKLHQELTNQFNKYQAQR---DRLTEQAQEKANRV 579
Query: 604 VQQELNFAKVQIDTVVQDF-------------ENQLRDASADEINSLIKESESAIAAIVE 650
V++ AK Q D ++ D EN+L DA E+N L ++
Sbjct: 580 VEE----AKQQADKIIADLHQKQKQIGKVAIKENELIDAKG-ELNKLEVAPNLKKNKVLT 634
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV--EVPGDDDTVLVQYGKMRVR 708
+ +F G+ V VKS G + T++ E G D VQ G ++++
Sbjct: 635 KEKEKHNFHT------------GDDVLVKSYGQQ-GTLIGKEKNGTWD---VQIGILKMK 678
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
+ + +I I AA+ + + Q ++ S+G S P +LDLRG
Sbjct: 679 IDEADIEKI-------AADKQSKPQYQTHVSRTRSSGIS-------P-------TLDLRG 717
Query: 769 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 824
R EEA +LD I A + +IHG GTG +++ V + L+ + RV + +P
Sbjct: 718 HRYEEAMFELDRYIDSALLAGYPSVTIIHGKGTGALRKGVTDYLKRNKRVKSFGYSAP 775
>gi|384182359|ref|YP_005568121.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|324328443|gb|ADY23703.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 786
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 236/835 (28%), Positives = 391/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++++ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESDMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|404328575|ref|ZP_10969023.1| recombination and DNA strand exchange inhibitor protein
[Sporolactobacillus vineae DSM 21990 = SL153]
Length = 786
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 241/855 (28%), Positives = 395/855 (46%), Gaps = 130/855 (15%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAV 68
Q+ ++LE + L +T +++ + + I DI L G +L E+ +
Sbjct: 33 QLQPAETLEAVRNLQEETDEGATVLRLKGSIPFGGITDIRPALKRTKIGSMLLAKELIDI 92
Query: 69 RRTLRAV---NNVWKKLTEAAELDGDSLQRYSPLLE-LLKNCNFLTELEEKIGFCIDCKL 124
T+R + + L E ELD P+L L+++ LE +I ID +
Sbjct: 93 ADTIRGIRLMKSFILDLAEDQELD-------LPILTGLVEHMTVPGGLEREIRSAIDDQG 145
Query: 125 LIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGI 182
+ +D AS L IR + + DS +K+ I + G + + +IT R R + +
Sbjct: 146 GV-MDSASTTLRHIRGQ----IRTFDSRVKQKLENIVHSSGKMLSEAIITIRNDRQVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ GI + S+SGAT F+EP+ V+ NN E E IL +L
Sbjct: 201 KQEYRGAF-GGIVHDQSASGATLFIEPQSIVDLNNQLSEARAKERHEVERILRVL----- 254
Query: 243 KSEREIKY---LMDRVL---EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
SE+ +Y L+D V ++D FA+A + M P L+ + I ++ +
Sbjct: 255 -SEKTAEYADGLLDSVAGLAQLDFIFAKASYGHQMKASRPRLNDRG------VIRLKRAR 307
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPL+ +P D VPID+ + +T ++I
Sbjct: 308 HPLI---------------SP--------------------DRVVPIDVLFDEQTHALII 332
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT S+KT GL +LM+++GL +PA+ + F + ADIGD QS+EQ+LSTFS
Sbjct: 333 TGPNTGGKTVSLKTTGLLTLMAQSGLQIPAEEGSEVSVFKKVFADIGDEQSIEQSLSTFS 392
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
H++ IV IL V +SLVL DE+G+GTDP EG AL+ +IL + R V TTHY++L
Sbjct: 393 SHMTNIVGILGQVDDQSLVLFDELGAGTDPQEGAALSIAILDTVYGRGATIVCTTHYSEL 452
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
+ NA+ EF +ETL PTYR+L G G SNA I+K +G +II A
Sbjct: 453 KAYAYERPGVMNASVEFDVETLSPTYRLLLGIPGRSNAFEISKKLGLPEEIIDEA----- 507
Query: 537 RLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL 596
RL+ + ++ ++ SL + R+ E++ A L + E+ + DL+R +
Sbjct: 508 RLQISHETNQIDKMIASLEQNRKAAETEEENARKLKHDAQAREAELTKKLNDLERNKEQI 567
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDF----------ENQLRDASADEINSLIKESESAIA 646
+ ++ ++ + A+ + D ++ E+QL DA ++ + ES +
Sbjct: 568 LIQAKEKAERAVKKARQEADEIIAALHHYKNSGNVKEHQLIDAKT-RLSHALDALESTDS 626
Query: 647 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
++ HR V + + F + G+ V + S G V ++ +D LVQ G ++
Sbjct: 627 RKIK-HR----IQVPKKMPAGF--KSGDHVRMTSFGQDGYIVDKI--NDHEYLVQAGVLK 677
Query: 707 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 766
+ V+ ++++ + K+ P +R E T + LDL
Sbjct: 678 MNVQDSDLKLVKEEKK---TRPVVNVRTSGE---------------------TVRPELDL 713
Query: 767 RGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYE 820
RG R E+A LD A+ R + +IHG GTG +++ V +++ HP V ++
Sbjct: 714 RGDRYEDAMLKVEKYLDEAMLAGYPR--VSIIHGKGTGALRKGVTKLIERHPNVKSSRLG 771
Query: 821 QESPMNYGCTVAYIK 835
+ G TV K
Sbjct: 772 NQGEGGSGVTVVDFK 786
>gi|217962033|ref|YP_002340603.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus AH187]
gi|222098016|ref|YP_002532073.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus Q1]
gi|229141279|ref|ZP_04269817.1| hypothetical protein bcere0013_43720 [Bacillus cereus BDRD-ST26]
gi|375286547|ref|YP_005106986.1| MutS2 family protein [Bacillus cereus NC7401]
gi|423355034|ref|ZP_17332659.1| MutS2 protein [Bacillus cereus IS075]
gi|423570780|ref|ZP_17547025.1| MutS2 protein [Bacillus cereus MSX-A12]
gi|423603770|ref|ZP_17579663.1| MutS2 protein [Bacillus cereus VD102]
gi|226723047|sp|B7HRJ3.1|MUTS2_BACC7 RecName: Full=MutS2 protein
gi|254766387|sp|B9J054.1|MUTS2_BACCQ RecName: Full=MutS2 protein
gi|217064711|gb|ACJ78961.1| MutS2 family protein [Bacillus cereus AH187]
gi|221242074|gb|ACM14784.1| DNA mismatch repair protein, MutS family [Bacillus cereus Q1]
gi|228642060|gb|EEK98353.1| hypothetical protein bcere0013_43720 [Bacillus cereus BDRD-ST26]
gi|358355074|dbj|BAL20246.1| MutS2 family protein [Bacillus cereus NC7401]
gi|401085211|gb|EJP93454.1| MutS2 protein [Bacillus cereus IS075]
gi|401203407|gb|EJR10246.1| MutS2 protein [Bacillus cereus MSX-A12]
gi|401246534|gb|EJR52881.1| MutS2 protein [Bacillus cereus VD102]
Length = 786
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 236/835 (28%), Positives = 390/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+L + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLKQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|291557709|emb|CBL34826.1| MutS2 family protein [Eubacterium siraeum V10Sc8a]
Length = 793
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 211/711 (29%), Positives = 340/711 (47%), Gaps = 99/711 (13%)
Query: 129 DRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
D AS L IR +R E LD L+K + Q + + + L+T R R V +K
Sbjct: 144 DSASPQLAAIRRSIQRKSLAVRERLDKLIKSQSTQKY----LQESLVTMRDGRFVVPVKT 199
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE-------IAEETAILSLL 237
+K + G+ + S++GAT F+EP VE NN E+R+ E I +E + L
Sbjct: 200 EYKSEIS-GLVHDTSATGATLFIEPMAVVEANN-EIRVLQIEEQKEIERIIKEMSELVGS 257
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
AE ++ EI VL +++ FA+A M V P+++ + N+ +H
Sbjct: 258 FAEPMINDYEI------VLTLEIYFAKANLGAKMKAVTPVITDKP------CFNLIRARH 305
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PL+ D VPI +++ + +++T
Sbjct: 306 PLI-----------------------------------DKDKVVPISLELGNDYSSLIVT 330
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT S+KT GL LM+ G+ +PA + + FD + DIGD QS+EQ+LSTFS
Sbjct: 331 GPNTGGKTVSLKTAGLLVLMAMCGMMIPASENSVIGMFDELYVDIGDEQSIEQSLSTFSS 390
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
H++ I IL +SL+++DE+ SGTDP EG ALA SIL R R + TTHY ++
Sbjct: 391 HMTNIARILRTADEKSLIMLDELCSGTDPVEGSALAVSILDEFRKRDCKVIATTHYQEVK 450
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
K ENA+ EF ++TLRPTYR++ G G SNA I+ +G II A++LV
Sbjct: 451 MYAIKTDNVENASCEFDIKTLRPTYRVIVGMPGKSNAFAISSKLGISSDIIDNAKELV-- 508
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
+ R E+ QSL + R++LE +AA+ + ++ +++ E L++ K
Sbjct: 509 ---STEDKRFEEVVQSLEKTRQELEKLKSSAAAEQKKSKEITEQLKAERDQLEKD----K 561
Query: 598 AKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
KE Q V+ + + + Q D ++++ E + + + +K + S I + V A
Sbjct: 562 EKELQDVRSKAASIIEEVRFQGDLMLEELERLKKQKESADFAQKVKGARSHINSSVNAMY 621
Query: 654 PDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
+ + + P + G+ V + L +K T++ +P + VQ G M+ + K
Sbjct: 622 DTANPIMQKKIDHYVLPRPLKVGDTVRLADL-NKEGTLLRLPDSKNMCFVQVGAMKTKTK 680
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
N+R + K+++ P P + G SN G LD+RGM
Sbjct: 681 LENLRLV-EEKKESKKQPTP--------SKVGKKLVSNFSRKSG-------MELDIRGML 724
Query: 771 VEEASHQLDIAL-ACWESR-SVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
++ ++D + +C S SV+ +IHG GTG ++ V + LR +P V +
Sbjct: 725 GDDGVMEVDRFIDSCLLSGISVITIIHGKGTGALRSAVQQYLRKNPHVKSF 775
>gi|402555327|ref|YP_006596598.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus FRI-35]
gi|401796537|gb|AFQ10396.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus FRI-35]
Length = 786
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 236/835 (28%), Positives = 391/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++++ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESDMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|291548598|emb|CBL24860.1| MutS2 family protein [Ruminococcus torques L2-14]
Length = 791
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 248/829 (29%), Positives = 373/829 (44%), Gaps = 126/829 (15%)
Query: 5 VVQKAQIPFGKS--LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSP 62
+VQK +I FG + +EES K L +I G L+S
Sbjct: 57 IVQKGRISFGDAAPVEESMKRL---------------------EIGGSLSS--------- 86
Query: 63 SEICAVRRTLRAVNNVWKKLTEAAELDG-DSLQRYSPLLELLKNCNFLTELEEKIGFCID 121
+E+ + R L V + D D L Y LLE L T L +I CI
Sbjct: 87 TELLRISRLLVNAARVKAYGRHDTQEDACDCLDEYFNLLEPL------TPLSNEIDRCI- 139
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKRRSRM 178
I D S+D + +R++ N++ + + + +IT R R
Sbjct: 140 ----IGEDEYSDDASSTLKQIRRSINNINDKVHATLTTLVNGSLRTYLQDAIITMRGDRY 195
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
CV +KA ++ + G+ + SS+G+T F+EP V+ NN L E E IL+ L+
Sbjct: 196 CVPVKAEYRGQV-QGLIHDQSSTGSTLFIEPMAIVKLNNDLKELYAKEQEEIQVILANLS 254
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
E A+ EI+ + ++D FAR A M P+L+ + I I +HP
Sbjct: 255 EEAAQYIEEIRVDYRSLTDLDFIFARGALAMSMRASRPLLNEEGR------IRIREGRHP 308
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LL +P K VPI + + + +++ITG
Sbjct: 309 LL---------------DPKKV--------------------VPITVTLGEDFTLLIITG 333
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT S+KT+GL LM ++GL++PA + L F I ADIGD QS+EQ+LSTFS H
Sbjct: 334 PNTGGKTVSLKTVGLFCLMGQSGLHIPAGDRSELAVFHQIYADIGDEQSIEQSLSTFSSH 393
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV L+ V SLVL DE+G+GTDP+EG ALA SIL +L R + TTHY++L
Sbjct: 394 MTNIVSFLKKVDERSLVLFDELGAGTDPTEGAALAISILSHLHQRGIRTMATTHYSELKV 453
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
ENA EF +E+LRPTYR+L G G SNA I+ +G II+ A+K
Sbjct: 454 YALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPDYIIEDAKK----- 508
Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
R Q +L L +R +E + A L E DL + + + LD + +
Sbjct: 509 RLSEQDVSFEDLLTDLETSKRTIEKEQEEIARLKKEAEDLKAQAKQRQEKLDDQRDRILR 568
Query: 599 KETQQVQQELNFAKVQIDTVVQDF-----ENQLRDASADEINSLIKE-SESAIAAIVEAH 652
+ ++ L AK D ++DF EN E L K+ ++A A+ ++A
Sbjct: 569 EANEKANAILREAKEIADKTIKDFRKFGKENISASEMEKEREKLRKKIKDTASASAMKAQ 628
Query: 653 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
+P E S F + GE V V S+ + TV +P + V+ G + +V +
Sbjct: 629 KPK-----KEHKASDF--KLGESVKVLSM-NLTGTVSSLPDAKGNLTVRMGILSSQVNIS 680
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
++ I + + AP+ + +R S + S P + +L G V+
Sbjct: 681 DLEII-----EEVSPYAPK----KMNRTSKGKIKMGKSLSVRPEI-------NLLGRTVD 724
Query: 773 EASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
EA +LD L A + + V+HG GTG +++ + E LR V Y
Sbjct: 725 EAVAELDKYLDDAILAHLNTVRVVHGKGTGALRKGIHEYLRRQKHVKSY 773
>gi|228987801|ref|ZP_04147910.1| hypothetical protein bthur0001_44690 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|228771849|gb|EEM20306.1| hypothetical protein bthur0001_44690 [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 786
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 240/837 (28%), Positives = 394/837 (47%), Gaps = 115/837 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+L + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
L E ++ E A +L + L+RE++ + + DR LKA+ ++ ++++ A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583
Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
K + + ++Q+ QLR A + + LI+ E A +V+ + N
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633
Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-- 689
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 -----------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYL 729
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 730 DDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|423373498|ref|ZP_17350837.1| MutS2 protein [Bacillus cereus AND1407]
gi|401096462|gb|EJQ04509.1| MutS2 protein [Bacillus cereus AND1407]
Length = 786
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 236/835 (28%), Positives = 390/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+L + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLKQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|269798126|ref|YP_003312026.1| MutS2 family protein [Veillonella parvula DSM 2008]
gi|269094755|gb|ACZ24746.1| MutS2 family protein [Veillonella parvula DSM 2008]
Length = 792
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 202/701 (28%), Positives = 334/701 (47%), Gaps = 73/701 (10%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+LD AS L +R + E + + ++ + + +IT+R +R + +K +
Sbjct: 141 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQEAIITQRNNRYVIPVKQEY 200
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 243
+ DG+ + S++G T ++EP V NN L + I EE +L + L+A + +
Sbjct: 201 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 256
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
++ ++V I+ + +A A GV ILS+ D ++N+ +HPL+
Sbjct: 257 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 307
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
P + VP +I++ R+++ITG NTGG
Sbjct: 308 -------------P-------------------PNMVVPTNIQLGTSYRILLITGSNTGG 335
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KTLGL SLM++ GL++PA + LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 336 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 395
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L VV+THY +L
Sbjct: 396 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMVVSTHYNELKNYAYHT 455
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
EN EF TL+PTYR+ G G S+AL+IA +G + I++RA + + +
Sbjct: 456 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVERATE----YKSQFG 511
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
H E+ L E+ RK + R E + ++E E K + + + +K
Sbjct: 512 SHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEKKQFNEKRKQILSKAQAD 571
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ +V+ + +++ + Q + + D S I + I+++ P DD S T
Sbjct: 572 AESMKRSLRVEGEAIIKQLKTQFSETNKDRRQSAINAARMGISSVHVPEAPVDDERKSLT 631
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 721
+ + G+ V+V SL L TV+ + G+ V + V+V ++ R N
Sbjct: 632 ADA---IKVGQAVYVTSL-RSLGTVLSINGNRVNVDINGLTATVKVSELQSTTREEGNKL 687
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 779
+ P+ RK R GSA +E + +++ G V+EA +
Sbjct: 688 AREQKAVMPKTRK----RMGGSAVQRQKEV---------RTEINILGQTVDEAIVSVGRF 734
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
I A + + +IHG GTG ++E V + LR P VA +E
Sbjct: 735 IDQALLGGVNQVRIIHGKGTGALREGVHQYLRTLPHVAHFE 775
>gi|221632685|ref|YP_002521906.1| MutS2 family protein [Thermomicrobium roseum DSM 5159]
gi|254766609|sp|B9KYW4.1|MUTS2_THERP RecName: Full=MutS2 protein
gi|221157216|gb|ACM06343.1| MutS2 family protein [Thermomicrobium roseum DSM 5159]
Length = 792
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 254/846 (30%), Positives = 386/846 (45%), Gaps = 133/846 (15%)
Query: 23 LLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL T A ++ +P + DI ++ +A G +L+P+++ V TL A ++ ++
Sbjct: 46 LLRVTREAARLLNERPSFTIGGFRDIRSVVQAAQRGNILAPADVRTVLDTLEAAASLRRQ 105
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
D +RY L E + L L + I + + LD AS +L IR
Sbjct: 106 FMA----DERWSERYPALAEFVLAMVDLPGLRADLARSIGPRGEV-LDTASPELAAIRRS 160
Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
K E L L+++ A+ +A I +T R R + ++A + +P GI +VS S
Sbjct: 161 LKEAHERLLERLRRLLAERQEA--IQDAYVTIRDGRYVIPVRADRRQAVP-GITHDVSGS 217
Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
G T F+EP +E NN L +E E IL +LT IA + E+ +++ +DLA
Sbjct: 218 GQTLFVEPFEVLELNNRWRELQAAETREIERILRVLTQRIADAADELLQIVEAGAALDLA 277
Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSS-----INIEGIKHPLLLGSSLRSLSAASSNSN 316
A+A A +D V P L S + + + +HPLL
Sbjct: 278 LAKARLAYDLDAVEPELLEPSGPTVPEGHPFLRVRLRAARHPLL---------------- 321
Query: 317 PLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASL 376
D + VPID+++ R++VITGPNTGGKT ++KT+GL +L
Sbjct: 322 ----DRRTA---------------VPIDVELGERFRILVITGPNTGGKTVALKTVGLLAL 362
Query: 377 MSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVL 436
M++AGL++PA L F I DIGD QS+EQNLSTFS H+ RIV L+ SLVL
Sbjct: 363 MAQAGLFIPAAPGSGLSVFPAIFVDIGDEQSIEQNLSTFSSHMRRIVATLQQADASSLVL 422
Query: 437 IDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLE 496
+DEI +GTDP EG ALA +IL+ L + L +VTTHY +L ENA+ EF
Sbjct: 423 LDEIAAGTDPQEGAALARAILERLLEIGALGIVTTHYPELKVFATGTPGLENASVEFDPV 482
Query: 497 TLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKSE 549
TL PTYR+L G G S+AL +A+ +G +I RA++L ++RL E Q+ +
Sbjct: 483 TLSPTYRLLVGLPGRSHALEVARRLGLPEDVIARARELLGSGAPQLDRLIAEMQRRLEEA 542
Query: 550 LYQSLMEERRKLESQ----------ARTAASLHAEIMDLYREIEDE---AKDLDR---RA 593
+ ER + E++ A ++ RE+E E A++L R RA
Sbjct: 543 ESLAAAAERSRREAEQLRAAAERLLAEAERERREARQEVLRELEAELARARELARKIERA 602
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
A A +V Q+ A ++ VQ Q R EI
Sbjct: 603 ARSPAYPPIEVTQDSLRALEEVKRRVQSSGRQSRQERVPEIA------------------ 644
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
G++V + +LG + VV + + + V V+ G+ RVR + +
Sbjct: 645 ------------------VGDRVELTALGLE-GDVVAIHPESEEVEVRIGQFRVRQPQAS 685
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
+R I + + + AP + + PRV+ + LRG+ VEE
Sbjct: 686 VRRIWPRREEVSQTFAPPV-----------------SVTTIPRVEP---EIHLRGLHVEE 725
Query: 774 ASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGC 829
A +LD L A + V+HG GTG +++ + LR+HP V +E P G
Sbjct: 726 ALDRLDRYLDRAVRAGLPWVRVVHGKGTGTLRQAIHAFLRDHPLVKSWELAGPHEGGLGV 785
Query: 830 TVAYIK 835
TV Y++
Sbjct: 786 TVVYLE 791
>gi|430758681|ref|YP_007208637.1| DNA mismatch repair protein MutSB [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|430023201|gb|AGA23807.1| DNA mismatch repair protein MutSB [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 785
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 241/803 (30%), Positives = 390/803 (48%), Gaps = 100/803 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
DI G L A G +LSPSE + L AV + +T+ AE DG + PL+ + +
Sbjct: 70 DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124
Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
+ E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
I ++ +HPLL P V N
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ +
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + TTHY +L NA+ EF +ETL PTY++L G G SNA I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II +A+ + + + + SL + +++ E + S+ E L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551
Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 639
+E++ + +L+ + + + QQ +++ A + + ++ + + + + + + LI
Sbjct: 552 KELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRSIKEEHKSFKDHELIN 611
Query: 640 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
++ + + A +T F P G++V V + G K T++E G ++
Sbjct: 612 -AKKRLEGAMPAFEKSKKPEKPKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN- 666
Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 759
VQ G ++++VK+ ++ I ++ P P+ K A G
Sbjct: 667 VQIGILKMKVKEKDLEFIKSA-------PEPKKEKMI-------------TAVKGKDYHV 706
Query: 760 SKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
S LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 707 SLE-LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHR 762
Query: 815 RV--AKYEQESPMNYGCTVAYIK 835
V +++ + G TV +K
Sbjct: 763 SVKSSRFGEAGEGGSGVTVVELK 785
>gi|359490844|ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
Length = 791
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 222/751 (29%), Positives = 381/751 (50%), Gaps = 88/751 (11%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIAGILNSAVS-GQLLSP---SEICAV 68
++ +ES +LL++T+AAL + + +D STI+ + ++ SA+ + + P +E AV
Sbjct: 76 QTYQESLRLLDETNAALEIHKHGGCTMDFSTIDAV--LVKSAIQHARRMLPVDGNEAMAV 133
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
L+ + L A + D D +R+ P+ E++ L + I +D + +
Sbjct: 134 VALLQLAETLQLNLKAAIKEDADWYKRFMPISEVIMGLVINRSLVKLIQQVVD-EDGSVK 192
Query: 129 DRASEDL----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
D AS L + +R ++ + +DSL++ + + ++ ++ R C+ A
Sbjct: 193 DSASSALKQSRDQVRTLERKLYQLMDSLVRN---NVNETSSLE---VSNVDGRWCIKSGA 246
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+ L G+ L+ S SG +EP A+ N+ + E +L LT ++
Sbjct: 247 NLTNL--KGLLLS-SGSGVGSIIEPLSAIPLNDELQKARALAAKAEADVLLKLTEKMQMD 303
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---------SSQSHVSF--------- 286
+I+ L+D V+++D+ ARA + G CP L S+ +H+S
Sbjct: 304 LEDIEKLLDSVIQLDVINARATYGLSFGGTCPDLFLAENKNGSSTGAHLSGHGTSEASYP 363
Query: 287 ---DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF---- 339
+ ++++ HPLL+ +L A + DV SL+ +S
Sbjct: 364 IKREWTLHLPKAYHPLLVQQHRENLQKA-------RKDV--------SLAISVSYVLEQS 408
Query: 340 -PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
PVP+D + TRV+VITGPNTGGKT +KT+GLA++M+++GL++ A R+PWFD +
Sbjct: 409 PPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHVLAAEPVRIPWFDYV 468
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QSL Q+LSTFSGH+ +I DI + +SLVL+DE+G+GT+P EG AL S+L+
Sbjct: 469 FADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGTNPLEGAALGMSLLE 528
Query: 459 YLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
+ L + TTH+++L LK + FENA EF L+PTY+ILWG G SNA+NI
Sbjct: 529 SFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYKILWGIPGRSNAINI 588
Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME-ERRKLESQARTAASLHAEIM 576
A+ +G +K++ +A+ E+ +E+ + +++ ER K E Q R + + ++
Sbjct: 589 AERLGVPKKVLDKAR--------EQYGAASAEINEVIIDMERFKQEFQERVNDARYYLML 640
Query: 577 --DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL----RDAS 630
DLY + + L + + + ++V + A+ + V+ + + +
Sbjct: 641 SRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQLRSSATRPSQPTA 700
Query: 631 ADEINSLIKESESAIAAIVEAHRPDDDFS-----VSETNTS--SFTPQFGEQVHVKSLGD 683
AD+ S AA + RP S V++ ++S P+ G+ VHV SLG
Sbjct: 701 ADKSQHASATSNQHTAADIN-ERPTTSESKHPAKVAQQSSSEKKRVPKVGDMVHVSSLGK 759
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
K ATV+EV ++VQ G M++++K ++
Sbjct: 760 K-ATVLEVESSKGQLVVQAGNMKLKLKLTDV 789
>gi|49478686|ref|YP_038600.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|81696639|sp|Q6HCX6.1|MUTS2_BACHK RecName: Full=MutS2 protein
gi|49330242|gb|AAT60888.1| DNA mismatch repair protein, MutS family [Bacillus thuringiensis
serovar konkukian str. 97-27]
Length = 786
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 236/835 (28%), Positives = 391/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + + R E L+++ + +Q + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNSQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|331086755|ref|ZP_08335832.1| hypothetical protein HMPREF0987_02135 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409921|gb|EGG89356.1| hypothetical protein HMPREF0987_02135 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 790
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 204/653 (31%), Positives = 308/653 (47%), Gaps = 70/653 (10%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R C+ +KA ++ + G+ + SS+G+T F+EP V+ NN L E E
Sbjct: 187 IITMRGDRYCLPVKAEYRSQV-QGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQEE 245
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL+ L+A+ A EI+ + E+D FA+ FA ++ PI + H
Sbjct: 246 IQVILANLSADAAGYVTEIRRNYKLLTELDFIFAKGSFALSLNASKPIFNDHGH------ 299
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
I+I +HPLL + VPI + +
Sbjct: 300 IHIREGRHPLLDKKKV-----------------------------------VPITVTLGD 324
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+E
Sbjct: 325 AFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELALFHEVYADIGDEQSIE 384
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALATSIL YL +R +
Sbjct: 385 QSLSTFSSHMTNIVSFLQHVDEHSLVLFDELGAGTDPTEGAALATSILSYLHERKIRTMA 444
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY++L ENA EF +ETLRPTY +L G G SNA I+ +G II
Sbjct: 445 TTHYSELKVYALSTPGVENACCEFDVETLRPTYHLLIGIPGKSNAFAISSKLGLPDYIIA 504
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
A+ ERL Q +L L RR +E + + A+ E+ L +++E + + L
Sbjct: 505 DAK---ERL--SEQDESFEDLLADLENSRRTIEKEQQEIAAYKREVEALKQKLEQKQERL 559
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAI 648
D R + + ++ L AK D +++F + + SA E+ + I
Sbjct: 560 DERKERIINEANEKANAILREAKEVADETMKNFRKFGKENISAAEMERERERLRQKIKKT 619
Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
+ D + S F + GE V V SL + TV +P + VQ G +R +
Sbjct: 620 GSGVKLDTKKPKKQHKPSDF--KLGEAVKVLSL-NLTGTVSSLPNAKGDLFVQMGILRSQ 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V +++ I P + + + S + S P + +L G
Sbjct: 677 VNISDLEIIDE----------PVITGKHLQKTSSGKMKMKKTMSVRPEI-------NLLG 719
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
V+EA +LD L A S + ++HG GTG ++ + L+ V Y
Sbjct: 720 KTVDEAIAELDKYLDDAYMSHISPVRIVHGKGTGALRSGIHNYLKRQKHVKSY 772
>gi|16079910|ref|NP_390736.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. 168]
gi|221310799|ref|ZP_03592646.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. 168]
gi|221315124|ref|ZP_03596929.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. NCIB 3610]
gi|221320042|ref|ZP_03601336.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. JH642]
gi|221324324|ref|ZP_03605618.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. SMY]
gi|402777014|ref|YP_006630958.1| DNA mismatch repair enzyme [Bacillus subtilis QB928]
gi|418031956|ref|ZP_12670439.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|452915656|ref|ZP_21964282.1| mutS2 family protein [Bacillus subtilis MB73/2]
gi|3914084|sp|P94545.2|MUTS2_BACSU RecName: Full=MutS2 protein
gi|1770036|emb|CAA99569.1| hypothetical protein [Bacillus subtilis]
gi|2635323|emb|CAB14818.1| putative DNA mismatch repair enzyme [Bacillus subtilis subsp.
subtilis str. 168]
gi|351470819|gb|EHA30940.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. subtilis str. SC-8]
gi|402482194|gb|AFQ58703.1| Putative DNA mismatch repair enzyme [Bacillus subtilis QB928]
gi|407960866|dbj|BAM54106.1| recombination and DNA strand exchange inhibitorprotein [Bacillus
subtilis BEST7613]
gi|407965696|dbj|BAM58935.1| recombination and DNA strand exchangeinhibitorprotein [Bacillus
subtilis BEST7003]
gi|452116004|gb|EME06400.1| mutS2 family protein [Bacillus subtilis MB73/2]
Length = 785
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 241/803 (30%), Positives = 389/803 (48%), Gaps = 100/803 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
DI G L A G +LSPSE + L AV + +T+ AE DG + PL+ + +
Sbjct: 70 DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124
Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
+ E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
I ++ +HPLL P V N
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ +
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + TTHY +L NA+ EF +ETL PTY++L G G SNA I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II +A+ + + + + SL + +++ E + S+ E L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551
Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 639
+E++ + +L+ + + + QQ +++ A + + ++ + + + + + LI
Sbjct: 552 KELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRTIKEEHKSFKDHELIN 611
Query: 640 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
++ + + A +T F P G++V V + G K T++E G ++
Sbjct: 612 -AKKRLEGAMPAFEKSKKPEKPKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN- 666
Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 759
VQ G ++++VK+ ++ I ++ P P+ K A G
Sbjct: 667 VQIGILKMKVKEKDLEFIKSA-------PEPKKEKMI-------------TAVKGKDYHV 706
Query: 760 SKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
S LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 707 SLE-LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHR 762
Query: 815 RV--AKYEQESPMNYGCTVAYIK 835
V +++ + G TV +K
Sbjct: 763 SVKSSRFGEAGEGGSGVTVVELK 785
>gi|357054690|ref|ZP_09115771.1| hypothetical protein HMPREF9467_02743 [Clostridium clostridioforme
2_1_49FAA]
gi|355383994|gb|EHG31065.1| hypothetical protein HMPREF9467_02743 [Clostridium clostridioforme
2_1_49FAA]
Length = 812
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 255/866 (29%), Positives = 398/866 (45%), Gaps = 106/866 (12%)
Query: 5 VVQKAQIPFGKSL----------EESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNS 53
+ + A P GK+L EE + QT+ A+ ++ + + S I DI L
Sbjct: 18 LTEYAASPLGKALCQSLSPSSDLEEVRTWQAQTTDAVTRIRLKGSVSFSGIRDIGDSLKR 77
Query: 54 AVSGQLLSPSEICAVRRTL----RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL 109
G LS E+ ++ L RA E G+S + L L L
Sbjct: 78 LDIGSSLSIPELLSISSLLTVAARAKAYGRHDADEDGRETGESQDDFDSLEPLFAGLEPL 137
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGG 165
T L +I CI + + D AS L +R K R L+S+L + + A
Sbjct: 138 TPLNSEIKRCILSEDEVA-DDASPGLSHVRRSMKVTADRIHTQLNSILNSNRSYLQDA-- 194
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+IT R R C+ +K+ +K + G+ + S++G+T F+EP + NN L
Sbjct: 195 ----VITMRDGRYCLPVKSEYKNQV-SGMVHDQSATGSTLFIEPMAIIRLNNEMRELEIQ 249
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E E A+L+ L+ + A E++ M+ + ++D FA+AG A+ P+ + +
Sbjct: 250 EQKEIEAVLASLSNQAAPYTEELRMDMELLAQLDFIFAKAGLARHYKCSAPMFNDKG--- 306
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
I+I+ +HPLL NP F VPI++
Sbjct: 307 ---CIHIKDGRHPLL---------------NP--------------------QFVVPINV 328
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
+ E ++++TGPNTGGKT S+KT+GL +LM ++GL++PA L FD + ADIGD
Sbjct: 329 WLGREFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLHIPAWEGSELAVFDQVFADIGDE 388
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+EQ+LSTFS H++ IV IL SL L DE+G+GTDP+EG ALA +IL +L +
Sbjct: 389 QSIEQSLSTFSAHMTNIVRILSEADSRSLCLFDELGAGTDPTEGAALAIAILSFLHNMKC 448
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY++L ENA EF++ETL+PTYR+L G G SNA I++ +G
Sbjct: 449 RTMATTHYSELKVFALSTPGVENACCEFNVETLQPTYRLLIGIPGKSNAFAISQKLGLPG 508
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
II A+ + E + +L SL R +E + + EI L + +
Sbjct: 509 YIIDDAKSHL-----EAKDESFEDLLTSLESSRLTIEKEQAEINAYKDEIASLKTRLTQK 563
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 645
+ LD R + T++ Q+ L AK D ++ N+L +S + KE E+
Sbjct: 564 EERLDERKDKILKNATEEAQRILREAKETADQTIKQI-NKLAASSG-----MGKELEAER 617
Query: 646 AAIVEA-HRPDDDFSVSETNTSS-FTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
A + + + D+ +V S +P + G+ V V S+ K TV +P + V
Sbjct: 618 ARLRDQLKKTDEKLAVKPKGPSQPISPKKLKIGDGVKVLSMNLK-GTVSTLPNAKGDLYV 676
Query: 701 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG--SSNEEASYGPRVQ 758
Q G +R V NIR + K+ + D S S G ++ + S +++
Sbjct: 677 QMGILRSLV---NIRDLELLNEKD-------ISATLGDGSSISYGGKTARGKGSGSSQIK 726
Query: 759 TSKNS-----LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 811
SK+S ++L GM V+EA ++ L A + V+HG GTG +K V + LR
Sbjct: 727 MSKSSTVSAEVNLIGMTVDEAVPAMEKYLDDAYLAHLQTVRVVHGRGTGALKNAVHKRLR 786
Query: 812 NHPRVAKYE--QESPMNYGCTVAYIK 835
V ++ Q + G TV K
Sbjct: 787 QLKYVKEFRLGQFGEGDSGVTVVTFK 812
>gi|336394748|ref|ZP_08576147.1| mutS family ATPase [Lactobacillus farciminis KCTC 3681]
Length = 784
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 214/720 (29%), Positives = 346/720 (48%), Gaps = 96/720 (13%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIK 183
+LD ASEDL+ IR + R L+ ++ Q + + + L+T R R + +K
Sbjct: 146 VLDTASEDLKYIRNQITR----LNDQIRHTMEQYTRGKNTKYLTENLVTLRDDRFVIPVK 201
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
+K G+ + S+SG T ++EP+ V NN SE AEE IL+ L+ +
Sbjct: 202 TEYKTKFG-GVVHDQSASGQTLYIEPQAVVGMNNQLHEAQVSEKAEEIRILNKLSDLVRP 260
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
EI + + + DL A+A +A+ + PI+S D +++ KHPL+
Sbjct: 261 QIDEILENNEVLAQFDLINAKAKYAKEIKATEPIISK------DHIVDLHDAKHPLI--- 311
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
+P D V DIK+ + ++ITGPNTGG
Sbjct: 312 ------------DP--------------------DKVVANDIKMGEGYKTMLITGPNTGG 339
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT +MKTLGL LM++AGL++PA + FD + DIGD QS+EQNLSTFS H+ I+
Sbjct: 340 KTITMKTLGLIQLMAQAGLFIPAHEESEIAVFDEVFVDIGDEQSIEQNLSTFSSHMDNII 399
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
+I+ VS SLVLIDE+G+GTDP EG A+A +IL+ L + TTHY +L
Sbjct: 400 NIIRKVSEHSLVLIDELGAGTDPQEGAAIAIAILEKLAQSHCFIMATTHYPELKIFAYNT 459
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
NA+ EF ++L+PTYR+L G G SNA NIA +G D+ ++ R Q L+ + +
Sbjct: 460 PETINASMEFDEKSLKPTYRLLIGIPGASNAFNIAARLGMDKGVVNRGQALM-----DGE 514
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR-RAAHLKAKETQ 602
+ + L R++ E + A+ D+ ++ E ++ LD+ + + ++A +
Sbjct: 515 SQDLNNMIADLENRRKEFEQKNDQLKVQLAKNKDVQKDYEKKSDALDKSKNSEIQAAKV- 573
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
+ Q ++ A+ + D +++ +D A +KE + IAA D +V +
Sbjct: 574 RANQIVSKARKESDKIIEKLHKLEQDGVA------VKEDQ-IIAAKTGLKNLHQDEAVKK 626
Query: 663 T-----NTSSFTPQFGEQVHVKSLG-DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
N + G+ VKSL D++ T+V ++ VQ G ++++ + +
Sbjct: 627 NRVLRRNKRRQQLKVGDT--VKSLQYDQIGTIVR-KNKNNEFEVQLGILKMKFGADELEK 683
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ N + P P + R + SS LDLRG R EEA
Sbjct: 684 VQNQE------PEPEKKPTMVKRTKSTGLSS---------------KLDLRGKRYEEAMA 722
Query: 777 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
+LD I A + + ++HG GTGV+++ V + L+ +P V + +P + G + A I
Sbjct: 723 ELDQYIDSALLAGYNQVTIVHGFGTGVIRKGVTKYLQRNPHVKSFGY-APASSGGSGATI 781
>gi|302144008|emb|CBI23113.3| unnamed protein product [Vitis vinifera]
Length = 807
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 221/763 (28%), Positives = 386/763 (50%), Gaps = 85/763 (11%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIAGILNSAVS-GQLLSP---SEICAV 68
++ +ES +LL++T+AAL + + +D STI+ + ++ SA+ + + P +E AV
Sbjct: 65 QTYQESLRLLDETNAALEIHKHGGCTMDFSTIDAV--LVKSAIQHARRMLPVDGNEAMAV 122
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIIL 128
L+ + L A + D D +R+ P+ E++ L + I +D + +
Sbjct: 123 VALLQLAETLQLNLKAAIKEDADWYKRFMPISEVIMGLVINRSLVKLIQQVVD-EDGSVK 181
Query: 129 DRASEDL----ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
D AS L + +R ++ + +DSL++ + + ++ ++ R C+ A
Sbjct: 182 DSASSALKQSRDQVRTLERKLYQLMDSLVRN---NVNETSSLE---VSNVDGRWCIKSGA 235
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+ L G+ L+ S SG +EP A+ N+ + E +L LT ++
Sbjct: 236 NLTNL--KGLLLS-SGSGVGSIIEPLSAIPLNDELQKARALAAKAEADVLLKLTEKMQMD 292
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL---------SSQSHVSF--------- 286
+I+ L+D V+++D+ ARA + G CP L S+ +H+S
Sbjct: 293 LEDIEKLLDSVIQLDVINARATYGLSFGGTCPDLFLAENKNGSSTGAHLSGHGTSEASYP 352
Query: 287 ---DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD-------------VENSEMTVG 330
+ ++++ HPLL+ +L A + + S+ E +++ +
Sbjct: 353 IKREWTLHLPKAYHPLLVQQHRENLQKARKDVSLAISEQRRKKLQGEKFNVKEETDINLS 412
Query: 331 SLSKGISDF----PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 386
SL ++ PVP+D + TRV+VITGPNTGGKT +KT+GLA++M+++GL++ A
Sbjct: 413 SLEMQVTRLEQSPPVPVDFFIAQRTRVLVITGPNTGGKTICLKTVGLAAMMARSGLHVLA 472
Query: 387 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 446
R+PWFD + ADIGD QSL Q+LSTFSGH+ +I DI + +SLVL+DE+G+GT+P
Sbjct: 473 AEPVRIPWFDYVFADIGDEQSLSQSLSTFSGHLKQISDIKAQSTNQSLVLLDEVGAGTNP 532
Query: 447 SEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
EG AL S+L+ + L + TTH+++L LK + FENA EF L+PTY+IL
Sbjct: 533 LEGAALGMSLLESFAETGALLTIATTHHSELKTLKYSNDAFENACMEFDEVNLKPTYKIL 592
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME-ERRKLESQ 564
WG G SNA+NIA+ +G +K++ +A+ E+ +E+ + +++ ER K E Q
Sbjct: 593 WGIPGRSNAINIAERLGVPKKVLDKAR--------EQYGAASAEINEVIIDMERFKQEFQ 644
Query: 565 ARTAASLHAEIM--DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
R + + ++ DLY + + L + + + ++V + A+ + V+
Sbjct: 645 ERVNDARYYLMLSRDLYENLLVTKRKLMEHGTNQRYGKMREVSEAAAVARSLLHKKVRQL 704
Query: 623 ENQL----RDASADEINSLIKESESAIAAIVEAHRPDDDFS-----VSETNTS--SFTPQ 671
+ + +AD+ S AA + RP S V++ ++S P+
Sbjct: 705 RSSATRPSQPTAADKSQHASATSNQHTAADIN-ERPTTSESKHPAKVAQQSSSEKKRVPK 763
Query: 672 FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
G+ VHV SLG K ATV+EV ++VQ G M++++K ++
Sbjct: 764 VGDMVHVSSLGKK-ATVLEVESSKGQLVVQAGNMKLKLKLTDV 805
>gi|42783724|ref|NP_980971.1| recombination and DNA strand exchange inhibitor protein [Bacillus
cereus ATCC 10987]
gi|81699646|sp|Q72ZJ0.1|MUTS2_BACC1 RecName: Full=MutS2 protein
gi|42739654|gb|AAS43579.1| MutS2 family protein [Bacillus cereus ATCC 10987]
Length = 786
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 236/835 (28%), Positives = 391/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVDL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++++ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESDMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|229099010|ref|ZP_04229945.1| hypothetical protein bcere0020_42340 [Bacillus cereus Rock3-29]
gi|229118041|ref|ZP_04247401.1| hypothetical protein bcere0017_43110 [Bacillus cereus Rock1-3]
gi|407707068|ref|YP_006830653.1| oxidoreductase, Gfo/Idh/MocA [Bacillus thuringiensis MC28]
gi|423377604|ref|ZP_17354888.1| MutS2 protein [Bacillus cereus BAG1O-2]
gi|423440711|ref|ZP_17417617.1| MutS2 protein [Bacillus cereus BAG4X2-1]
gi|423463776|ref|ZP_17440544.1| MutS2 protein [Bacillus cereus BAG6O-1]
gi|423533128|ref|ZP_17509546.1| MutS2 protein [Bacillus cereus HuB2-9]
gi|423541608|ref|ZP_17517999.1| MutS2 protein [Bacillus cereus HuB4-10]
gi|423547839|ref|ZP_17524197.1| MutS2 protein [Bacillus cereus HuB5-5]
gi|423622372|ref|ZP_17598150.1| MutS2 protein [Bacillus cereus VD148]
gi|228665490|gb|EEL20972.1| hypothetical protein bcere0017_43110 [Bacillus cereus Rock1-3]
gi|228684508|gb|EEL38451.1| hypothetical protein bcere0020_42340 [Bacillus cereus Rock3-29]
gi|401171141|gb|EJQ78374.1| MutS2 protein [Bacillus cereus HuB4-10]
gi|401178276|gb|EJQ85456.1| MutS2 protein [Bacillus cereus HuB5-5]
gi|401261512|gb|EJR67672.1| MutS2 protein [Bacillus cereus VD148]
gi|401638453|gb|EJS56203.1| MutS2 protein [Bacillus cereus BAG1O-2]
gi|402418842|gb|EJV51131.1| MutS2 protein [Bacillus cereus BAG4X2-1]
gi|402421320|gb|EJV53580.1| MutS2 protein [Bacillus cereus BAG6O-1]
gi|402464361|gb|EJV96057.1| MutS2 protein [Bacillus cereus HuB2-9]
gi|407384753|gb|AFU15254.1| recombination and DNA strand exchange inhibitor protein [Bacillus
thuringiensis MC28]
Length = 786
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 233/817 (28%), Positives = 384/817 (47%), Gaps = 109/817 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I D+ + A G +LSP+E+ + T+ N+
Sbjct: 45 ELQDTTDEAAKVIRLKGSAPL--GGITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++ + QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIHEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + S + S LDLRG R E+A +++ L
Sbjct: 690 ---------KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A S + +IHG GTG +++ V + L+ H V Y
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|404371451|ref|ZP_10976755.1| MutS2 protein [Clostridium sp. 7_2_43FAA]
gi|226912421|gb|EEH97622.1| MutS2 protein [Clostridium sp. 7_2_43FAA]
Length = 785
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 217/724 (29%), Positives = 351/724 (48%), Gaps = 98/724 (13%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
I D+AS L IR RN++ +S ++ I +A + L T R R + +KA
Sbjct: 145 ISDKASSTLNGIR----RNLKEKNSSVRDKINSIVRANAKYLQDTLYTMRGDRYVLPVKA 200
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
+K +P G+ + SS+GAT F+EP V NN L E AE IL L+ + ++
Sbjct: 201 EYKGAVP-GLVHDQSSTGATLFIEPMSLVNLNNEIKELKLKEKAEIERILMDLSNRVYEN 259
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
++ + E+D FA+ +A ++ +CP V+ D S +I +HPL+
Sbjct: 260 IETVESNYKILTELDFIFAKGKYASSLNAICP------EVNEDRSFDIIQGRHPLI---- 309
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+P VP DI + E ++ITGPNTGGK
Sbjct: 310 -----------DP--------------------KVVVPSDIYLGKEFNTLMITGPNTGGK 338
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT+GL LM +GL +PAK+ + +F I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 339 TVTLKTVGLLHLMGLSGLLIPAKDASSISFFTKIFADIGDEQSIEQSLSTFSSHMTNIVK 398
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I++ SLVL DE+GSGTDP EG ALA +I+ LR++ + TTHY++L +
Sbjct: 399 IMKEADDSSLVLFDELGSGTDPVEGAALAIAIIDTLREQEARLIATTHYSELKGYALRTA 458
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE- 541
ENA+ EF +ETLRPTYR+L G G SNA I+K +G +I +A+ + E L+ E
Sbjct: 459 GIENASVEFDVETLRPTYRLLIGVPGKSNAFEISKRLGLQDDVINKAKSNISSENLQFED 518
Query: 542 --RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH-LKA 598
R KS L E ++++ +A + E E+ D+A + RR A + A
Sbjct: 519 LIRDLQEKSILANRDAREAKRIKIEAEELKKKYDEKFKKLEEVRDKAYNEARREAKDIIA 578
Query: 599 KETQQVQQELN-FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
K + + L +++ + Q +L + +SL K+ ES
Sbjct: 579 KAKDEADEILKAMRELEKLGISQGGRARLEEERKKLKDSLEKKEESL------------- 625
Query: 658 FSVSETNTSSFTPQ--FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
+ + E NT + G ++ SL + ++ +P V V+ G M++ VK ++R
Sbjct: 626 YKIRE-NTGEVIEKVILGMDAYLPSLNQNV-IIITMPDSRGEVQVEAGIMKINVKLKDLR 683
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
+ N+ P +++++ + +++ ++ +DLRGM EEA
Sbjct: 684 KVNNT---------PNKKEKKKRELKLN-------------LKSIESRVDLRGMDAEEAC 721
Query: 776 HQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTV 831
++ D L A + + ++HG GTGV+++ + ++L+ HP V Y + G T+
Sbjct: 722 YKTDKYLDEAYMANLGEVTIVHGKGTGVLRKAINDMLKRHPHVKSYRLGEYGEGGDGVTI 781
Query: 832 AYIK 835
A +K
Sbjct: 782 AILK 785
>gi|291533994|emb|CBL07107.1| Mismatch repair ATPase (MutS family) [Megamonas hypermegale
ART12/1]
Length = 611
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 193/633 (30%), Positives = 317/633 (50%), Gaps = 67/633 (10%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG + +K +P E + L + A+ ++ S+P I DI +L G ++
Sbjct: 26 MGKELAEKL-LPSSDIDEVIENLSHTQEASNILISSEP-PFGGIHDIRSLLKKTSLGLVI 83
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
+ + + T+ A+ N+ KK + E+D + ++ +E+L +LE +I +
Sbjct: 84 EINSLLDILNTMYAMRNL-KKFFKELEIDSPQFKEWAKSIEIL------GQLEREIDNIV 136
Query: 121 DCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
D + + D AS +L IR E ++R NLD +LK Q + I +T R
Sbjct: 137 D-EHGSMRDSASVELMRIRREIKSSQRRIKTNLDGILKNPDYQKYFQDNI----VTIRDE 191
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R + IK ++ P G+ + SSSG+T F+EP V+ NN +L E E IL +
Sbjct: 192 RYVIPIKQEYRQQFP-GVVHDQSSSGSTLFIEPMSIVDLNNDIKQLVIDEKREIERILKV 250
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
++ +IA++ + + + + ++D AFA+A A+ M P ++ + +N+ +
Sbjct: 251 ISEKIARNADSLLHNCEIMAQLDFAFAKAKLARKMHATMP------EINDEGIVNLAKAR 304
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVI 356
HPLL D VPIDI++ R ++I
Sbjct: 305 HPLL-----------------------------------NKDNVVPIDIRLGEGYRTLLI 329
Query: 357 TGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFS 416
TGPNTGGKT SMKTLGL LM+++GL++P ++ ++ F + ADIGD QS+EQ+LSTFS
Sbjct: 330 TGPNTGGKTVSMKTLGLLVLMTQSGLFIPVQSGSKISIFQNVYADIGDEQSIEQSLSTFS 389
Query: 417 GHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADL 476
H+ IV+IL + + L+L+DE+GSGTDP EG ALA SIL+ L + V TTHY +L
Sbjct: 390 AHMRNIVNILNNIEHDDLLLLDEVGSGTDPEEGAALAMSILERLMEIGACTVATTHYNEL 449
Query: 477 SCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVE 536
ENA EF +++LRPTYR+L G+ G SNA I+K +G +I RAQ+L+
Sbjct: 450 KTFAYSKEGIENACVEFDIKSLRPTYRLLIGTPGASNAFAISKRLGLSDTLILRAQQLI- 508
Query: 537 RLRPERQQHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
+ H + E + +L E+ E + A I L +++ D +++ ++
Sbjct: 509 -----KADHAQFENVLNTLENEKLMYEQKNADIAERQQRIEKLEKQLADMKQEMAKKKEQ 563
Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRD 628
K +Q L + + + ++++ + Q D
Sbjct: 564 TLRKTKEQCASLLRRTRRESEEIIKELKAQFND 596
>gi|89098890|ref|ZP_01171770.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. NRRL B-14911]
gi|89086294|gb|EAR65415.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. NRRL B-14911]
Length = 784
Score = 262 bits (670), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 250/847 (29%), Positives = 395/847 (46%), Gaps = 132/847 (15%)
Query: 18 EESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVN 76
EE +L +T A+ +++ + + L I DI + +V G +LSP E+ + T+ A
Sbjct: 41 EEVVRLQEETDEAVKVLRIKGNIPLGGIFDIRPHVKRSVIGGMLSPQELVQIASTVHASR 100
Query: 77 NVWKKL----TEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
+ + + E +EL P+L E + L ELEE I ID + LD A
Sbjct: 101 QLKRFVDDFSNEESEL---------PILTEYMDRVIVLAELEEAIRMAIDENGEM-LDSA 150
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S+ L IR + + R E L+S+++ A A + +IT R R + +K ++
Sbjct: 151 SDALRSIRTQLRTRESRVRERLESMIRSSNA----AKMLSDAIITIRNDRFVIPVKQEYR 206
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + SSSG T F+EP+ V+ NN + E E IL L+ A + E
Sbjct: 207 GHY-GGIIHDQSSSGQTLFIEPQAIVQLNNELQSIRVKEQQEIERILVELSGRAAAYQPE 265
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ +++ + E+D FA+ +++ + P V+ + IN+ +HPLL
Sbjct: 266 LDMIVEVLAEVDFMFAKGRYSRRLKASKP------EVNNERRINLFKARHPLL------Q 313
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ A +N DI + + +VITGPNTGGKT +
Sbjct: 314 IDEAVAN-----------------------------DISLGRDYTTIVITGPNTGGKTVT 344
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM++AGL +PA + + F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 345 LKTVGLCTLMAQAGLQIPALDGSEVSVFGAVYADIGDEQSIEQSLSTFSSHMVNIVDILA 404
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
ESLVL DE+G+GTDP EG ALA SIL + R + TTHY +L
Sbjct: 405 KADFESLVLFDELGAGTDPQEGAALAISILDEVYKRGSRVIATTHYPELKAYGYNREGVI 464
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF +ETL PTY++L G G SNA I++ +G D +I+ A+ V +
Sbjct: 465 NASVEFDIETLSPTYKLLIGVPGRSNAFEISRRLGLDNSVIESARSHVSE-----DSSQI 519
Query: 548 SELYQSLMEERRKLESQA-------RTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
+ SL + RR+ E + R A LH ++ E ++ ++ +AA A
Sbjct: 520 ENMIASLEDSRRQAEKELEEAHELLRGADMLHKDMQKQMMEYYEQKDEMQEKAAAKAADI 579
Query: 601 TQQVQQEL-----NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
++ + E + K++I+ + E++L DA ++ K S+S EA + D
Sbjct: 580 VEKAKAEAEEIIRDLRKMRIEKHAEVKEHELIDARKKLEDAAPKVSKSK----KEARKSD 635
Query: 656 D-DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
DF+ G++V V + G K ++E +D+ VQ G ++++VK+ ++
Sbjct: 636 KHDFAA------------GDEVKVLTFGQK-GHLLERASEDEW-QVQIGILKMKVKERDL 681
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
I + P P+ K A ++ G LDLRG R E+A
Sbjct: 682 EFIKS--------PKPKETK-------AMAIVKGRDSHVGL-------ELDLRGERYEDA 719
Query: 775 ----SHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYG 828
+D AL R + +IHG GTG +++ V E L+NH V ++ + G
Sbjct: 720 LIRVEKYIDDALLSNYPR--VSIIHGKGTGALRQGVQEYLKNHRSVKRIRFGEAGEGGSG 777
Query: 829 CTVAYIK 835
TV K
Sbjct: 778 VTVVEFK 784
>gi|256545517|ref|ZP_05472877.1| DNA mismatch repair protein MutS [Anaerococcus vaginalis ATCC
51170]
gi|256398728|gb|EEU12345.1| DNA mismatch repair protein MutS [Anaerococcus vaginalis ATCC
51170]
Length = 781
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 245/850 (28%), Positives = 389/850 (45%), Gaps = 137/850 (16%)
Query: 16 SLEESQKLLNQTSAAL-AMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+++E + L++T A ++++ +D+ + D+ I+ +L P E+ V LR
Sbjct: 39 NIKEIKDELDKTKAMEEVIVENGNIDIFGLFDLKEIIEYVRKKGILEPFELLKVLDLLR- 97
Query: 75 VNNVWKKLTEAAELDGDSLQRY-SPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V+N K+ E E Y L + + +F+ + E+ D I D AS
Sbjct: 98 VSNYLKEYGENIE------NPYIKDLFDRISVNDFIKDEIERSIISEDE----IADNASA 147
Query: 134 DLELIRAE-RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
+L IR + K+ E + L +++ F DK +++ R R + +K + K +L +
Sbjct: 148 NLRSIRKKIGKKEAEIKNKLSFYISSPKFDESLQDK-VVSIRDGRYVLPVKTNKKSVL-N 205
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTAEIAKSEREIK 249
GI + S SG T F+EP VE NN LSN +I E I L L+ + ++EI
Sbjct: 206 GIIHDRSQSGNTLFIEPNAIVELNN---DLSNLQIEESDEIRRILDRLSRFVEGFDQEIL 262
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ ID A+ + + P L+ + IN++ +HPLL G+
Sbjct: 263 ENQKLIQRIDFLQAKVKYFLAHEYTMPKLTDKK------IINLKSARHPLLKGNV----- 311
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
VPID+K+ + ++ITGPNTGGKT S+K
Sbjct: 312 -------------------------------VPIDVKIGDGYKTLIITGPNTGGKTVSLK 340
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL SLM++AG Y+P + FD I DIGD QS+E +LSTFS ++ IV I E V
Sbjct: 341 TVGLVSLMAQAGFYIPCDEDSVVNVFDDIFLDIGDTQSIEMSLSTFSASLTNIVKITENV 400
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
S SLVL+DE+GSGTDP+EG ALA SIL++L+++ + TTHY++L + NA
Sbjct: 401 SENSLVLLDEVGSGTDPTEGAALAISILEFLKNKNVMTFATTHYSELKYYALEKEGVMNA 460
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER--------LRPE 541
+ EF +E+L PTY+++ G+ G SNA I+K +G D+KI+ A+ ++ L
Sbjct: 461 SVEFDVESLSPTYKLIIGTPGKSNAFEISKRLGLDKKILANAKSILSDDNKNFNTILEQL 520
Query: 542 RQQHRKSELYQSLMEERRKLESQART-AASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
Q ++ E+ +E+ +K +AR +L I +EI ++A+D +A + +
Sbjct: 521 DQNKKEMEIKNQEIEDYKKKIKKARNDLLALSENIKKQEKEIIEKAED---KANKILEEA 577
Query: 601 TQQVQQELNFAK-------VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
+ Q L AK ID + D N+ +D+ D + KE S A
Sbjct: 578 NKASQDMLKIAKKSKNGNTSDIDRSLNDIRNKYKDSKIDRQEEVFKEKISKNA------- 630
Query: 654 PDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
PQ G+ V ++ L +K A V+E P + + VQ G +++
Sbjct: 631 ----------------PQNLKVGDVVLIEGLNEK-AQVIENPDEKGNIKVQMGILKMDSN 673
Query: 711 KNNIRPIP-NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
N+ I N+K K N + +K P +LDLRG
Sbjct: 674 IKNVTKIKSNNKTKENTNRIYKAKKAMH---------------ISP-------TLDLRGQ 711
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPM 825
R +EA D L A +IHG GTG ++ + + L+N+ + Y E
Sbjct: 712 RYDEALRNFDKYLDDAMLSGLDQAKIIHGKGTGALRNGINDYLKNNKMIDSYRPGNEKEG 771
Query: 826 NYGCTVAYIK 835
YG T+ K
Sbjct: 772 GYGVTIVKFK 781
>gi|340755208|ref|ZP_08691905.1| MutS2 protein [Fusobacterium sp. D12]
gi|419840320|ref|ZP_14363712.1| putative recombination and DNA strand exchange inhibitor protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|421499445|ref|ZP_15946489.1| MutS2 family protein [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
gi|313685859|gb|EFS22694.1| MutS2 protein [Fusobacterium sp. D12]
gi|386908352|gb|EIJ73049.1| putative recombination and DNA strand exchange inhibitor protein
[Fusobacterium necrophorum subsp. funduliforme ATCC
51357]
gi|402269698|gb|EJU19022.1| MutS2 family protein [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
Length = 778
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 226/817 (27%), Positives = 387/817 (47%), Gaps = 121/817 (14%)
Query: 39 LDLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
LD+ ++DI + + G L E+ + LR +L + L +Y
Sbjct: 63 LDVRHLKDICSLTEKIKLIGTYLEVDELWDINMNLRFFRIFQAQL--------EDLGKYK 114
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
L + ++ + L +E+ I +D + I D AS DL IR +K +N+ ++
Sbjct: 115 ALRDYMRQVSPLRLIEDLISKAVDSEKQI-KDEASLDLRDIRIHKKMLAQNIRRKFDELF 173
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ A + ++T+R RM V +K K L+ GI + SSSG T F+EP V NN
Sbjct: 174 EEASIAVAFQERIVTERDGRMVVPVKVDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNN 232
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E E IL L+ +I + E+ + +L +D A+A F ++ C +
Sbjct: 233 KMRELETKEKEEIRKILLRLSEQIRNHQDEMYKIGTMILYLDRLQAKANFG--LEEACHV 290
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
+ Q + +E +HP + +
Sbjct: 291 PTIQGK----EILYLEKARHPFIPKEKV-------------------------------- 314
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VP+ ++ + R+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA H ++ +F
Sbjct: 315 ---VPLTFEIGKDYRILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASEHSKIGFFQG 371
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
+ ADIGD QS+EQ+LS+FS H++ + +IL V R LVL+DE+GSGTDP+EG A A SI+
Sbjct: 372 VFADIGDEQSIEQSLSSFSAHVTNLQEILREVHRNCLVLLDELGSGTDPTEGSAFAMSII 431
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
YL+++ A++TTHY+++ + E A+ EF TL PTYR+L G G+SNAL I
Sbjct: 432 DYLKEKKCNAIITTHYSEVKAHGYNEEGIETASMEFDTATLSPTYRLLMGIPGESNALTI 491
Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 577
AK +G + II +AQ + + ++K EL + +++++ + + AE+
Sbjct: 492 AKRLGVPQDIIDKAQSYIS------EDNKKIELMIN------NIKNKSESLDRMQAELEG 539
Query: 578 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI-DTVVQDFE---NQLRDASADE 633
L R AA + ++ ++ ++ L K +I +D E N++R ++
Sbjct: 540 L------------REAARMNQQKWEEERRNLEREKNEILKKAYEDSEKMMNEMRAKASAL 587
Query: 634 INSLIKESESAIAA---------IVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLG 682
I + KE S A + A + + + ++S T T F G++V VK++
Sbjct: 588 IEKIQKEENSKEQAKQIQKNLNMLSSALKEEKNKTISITKTMKKKANFKEGDRVFVKNI- 646
Query: 683 DKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSG 742
++ A+V+++ ++ VQ G +++ V + IR K K R Q + +
Sbjct: 647 NQFASVLKINAMKESAQVQAGILKLEVPFDEIRVTEEKKEK---------RYQVQVHKKI 697
Query: 743 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 800
+ ++ +DLRG V+E H+L+ L A ++VIHG GTG
Sbjct: 698 AV----------------RSEIDLRGKMVDEGIHELETYLDRALLNGYHEIYVIHGKGTG 741
Query: 801 VVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
++ +L+ L+ P V ++ GCTV +K
Sbjct: 742 ALRNGILDYLKTCPYVKEFRIGGHGEGGLGCTVVTLK 778
>gi|229158157|ref|ZP_04286225.1| hypothetical protein bcere0010_43350 [Bacillus cereus ATCC 4342]
gi|228625319|gb|EEK82078.1| hypothetical protein bcere0010_43350 [Bacillus cereus ATCC 4342]
Length = 786
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 240/837 (28%), Positives = 393/837 (46%), Gaps = 115/837 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+L + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFA 611
L E ++ E A +L + L+RE++ + + DR LKA+ ++ ++++ A
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEDRDERLLKAQ--KEGEEKVEAA 583
Query: 612 KVQIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS 666
K + + ++Q+ QLR A + + LI+ E A +V+ + N
Sbjct: 584 KKEAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVK 633
Query: 667 SFTPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+ P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 634 NTAPKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-- 689
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 -----------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYL 729
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 730 DDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|433449627|ref|ZP_20412491.1| MutS2 family protein [Weissella ceti NC36]
gi|429539141|gb|ELA07179.1| MutS2 family protein [Weissella ceti NC36]
Length = 794
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 233/820 (28%), Positives = 382/820 (46%), Gaps = 86/820 (10%)
Query: 24 LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L QTS A +++ + L + +ED+ + G LS +E+ V R L +
Sbjct: 47 LAQTSDASKVLRYEGGLTIPRLEDVTPHMKRVEIGAALSGTELAQVGRVLFTTGQMSLFF 106
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
+ GD L P L + EL +++ ID + D AS +L IR +
Sbjct: 107 ENFIQDRGDDLPALKPYYTRLVT---MPELTKQLNVAIDADGRVT-DEASVELHRIR-QA 161
Query: 143 KRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
EN + + AQ + P++T+R R V +KA ++ G+ +
Sbjct: 162 ITGTENGIRQRMQDYTRGKMAQY-----LSDPIVTQRNDRYVVPVKAEYRSKF-GGVVHD 215
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE 257
S +G T ++EP V+ NN E EE IL+ L+ + +++ D + +
Sbjct: 216 QSQTGQTLYVEPADVVDMNNRLRENIVKERHEEARILAELSELLLPVAQDVTANADILGQ 275
Query: 258 IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNP 317
+D A+A +A + P +S ++H+ + +HPLL
Sbjct: 276 LDFVNAKARYAMMSKSLEPEVSDENHIRLLEA------RHPLL----------------- 312
Query: 318 LKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLM 377
L+K +++ DI + + ++ITGPNTGGKT ++KTLGL LM
Sbjct: 313 -------------DLNKAVAN-----DIVLGEDYTAIIITGPNTGGKTITLKTLGLLQLM 354
Query: 378 SKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLI 437
+++GL++P H + FD I ADIGD QS+EQ+LSTFS H+ IV IL+ ++ SLVL
Sbjct: 355 AQSGLFIPTAEHATVGMFDQIFADIGDEQSIEQSLSTFSSHMVNIVSILDNLTPNSLVLF 414
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DE+G+GTDP EG ALA SIL + V TTHY +L NA+ EF +ET
Sbjct: 415 DELGAGTDPQEGAALAMSILDAVGQTGAYTVATTHYPELKVYGFNRADTINASMEFDVET 474
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 557
L+PTY+ L G G SNAL I++ +G D II A L + + +++ L+
Sbjct: 475 LKPTYKFLLGIPGRSNALEISRRLGLDNTIIDGAASLA-----DDESQELNDMIADLVAR 529
Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
R + +Q + AE + E D+ + +D A K Q+ + +K + D
Sbjct: 530 RNAVLTQQIELSDQIAENRRMKNEYTDKLEKVDTVRAQTIEKAKQEANHIVAESKKKADR 589
Query: 618 VVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV---SETNTSSFTPQFGE 674
++ D RD + + N LI +++ A+ A+ + +++ + + T G+
Sbjct: 590 IISDLHKMQRDGAQIKENKLI-DAKGALNALEQKPSAENNRVLKRAKQAKDQGITK--GD 646
Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 734
V V G + TV+ V +D +Q G +++ + + I+ +K AA A + +K
Sbjct: 647 TVLVMEYGQQ-GTVLRVL-KNDQFEIQMGILKMVLSGDEIQKQAETK---AAPSAQKAKK 701
Query: 735 QQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLF 792
+ + + + + +EAS +LDLRG R + A +LD I A + S +
Sbjct: 702 RTAVKATTNKAVNRQEASV---------TLDLRGQRYDAAMQKLDQFIDRALLNNLSSVE 752
Query: 793 VIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVA 832
+IHG GTG +++ V E LR+H V + P + G T A
Sbjct: 753 IIHGKGTGAIRQGVTEYLRSHRGVKSFNFTGP-DQGATYA 791
>gi|30264620|ref|NP_846997.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Ames]
gi|47530091|ref|YP_021440.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49187442|ref|YP_030694.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Sterne]
gi|65321918|ref|ZP_00394877.1| COG1193: Mismatch repair ATPase (MutS family) [Bacillus anthracis
str. A2012]
gi|165871464|ref|ZP_02216111.1| MutS2 family protein [Bacillus anthracis str. A0488]
gi|167635560|ref|ZP_02393872.1| MutS2 family protein [Bacillus anthracis str. A0442]
gi|167641563|ref|ZP_02399810.1| MutS2 family protein [Bacillus anthracis str. A0193]
gi|170688257|ref|ZP_02879467.1| MutS2 family protein [Bacillus anthracis str. A0465]
gi|170708684|ref|ZP_02899122.1| MutS2 family protein [Bacillus anthracis str. A0389]
gi|177653140|ref|ZP_02935427.1| MutS2 family protein [Bacillus anthracis str. A0174]
gi|190566985|ref|ZP_03019901.1| MutS2 family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227817334|ref|YP_002817343.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. CDC 684]
gi|229603197|ref|YP_002868830.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. A0248]
gi|254686957|ref|ZP_05150815.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. CNEVA-9066]
gi|254736658|ref|ZP_05194364.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Western North America USA6153]
gi|254741696|ref|ZP_05199383.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Kruger B]
gi|254754707|ref|ZP_05206742.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Vollum]
gi|254757539|ref|ZP_05209566.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. Australia 94]
gi|386738447|ref|YP_006211628.1| MutS2 family protein [Bacillus anthracis str. H9401]
gi|421639161|ref|ZP_16079754.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. BF1]
gi|81714920|sp|Q81L40.1|MUTS2_BACAN RecName: Full=MutS2 protein
gi|254766187|sp|C3PAE0.1|MUTS2_BACAA RecName: Full=MutS2 protein
gi|254766188|sp|C3L808.1|MUTS2_BACAC RecName: Full=MutS2 protein
gi|30259278|gb|AAP28483.1| MutS2 family protein [Bacillus anthracis str. Ames]
gi|47505239|gb|AAT33915.1| MutS2 family protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49181369|gb|AAT56745.1| MutS2 family protein [Bacillus anthracis str. Sterne]
gi|164712761|gb|EDR18291.1| MutS2 family protein [Bacillus anthracis str. A0488]
gi|167510448|gb|EDR85847.1| MutS2 family protein [Bacillus anthracis str. A0193]
gi|167528980|gb|EDR91735.1| MutS2 family protein [Bacillus anthracis str. A0442]
gi|170126364|gb|EDS95253.1| MutS2 family protein [Bacillus anthracis str. A0389]
gi|170667763|gb|EDT18516.1| MutS2 family protein [Bacillus anthracis str. A0465]
gi|172081664|gb|EDT66735.1| MutS2 family protein [Bacillus anthracis str. A0174]
gi|190561976|gb|EDV15945.1| MutS2 family protein [Bacillus anthracis str. Tsiankovskii-I]
gi|227002648|gb|ACP12391.1| MutS2 family protein [Bacillus anthracis str. CDC 684]
gi|229267605|gb|ACQ49242.1| MutS2 family protein [Bacillus anthracis str. A0248]
gi|384388299|gb|AFH85960.1| MutS2 family protein [Bacillus anthracis str. H9401]
gi|403393580|gb|EJY90823.1| recombination and DNA strand exchange inhibitor protein [Bacillus
anthracis str. BF1]
Length = 786
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 236/835 (28%), Positives = 391/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PT+++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTHKLLIGVPGRSNAFEISKRLGLSNRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|229105178|ref|ZP_04235827.1| hypothetical protein bcere0019_43120 [Bacillus cereus Rock3-28]
gi|228678104|gb|EEL32332.1| hypothetical protein bcere0019_43120 [Bacillus cereus Rock3-28]
Length = 786
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 233/817 (28%), Positives = 384/817 (47%), Gaps = 109/817 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I D+ + A G +LSP+E+ + T+ N+
Sbjct: 45 ELQDTTDEAAKVIRLKGSAPL--GGITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVREKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++ + QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIHEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + S + S LDLRG R E+A +++ L
Sbjct: 690 ---------KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A S + +IHG GTG +++ V + L+ H V Y
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|418010214|ref|ZP_12649997.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lc-10]
gi|410554421|gb|EKQ28397.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lc-10]
Length = 786
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 244/852 (28%), Positives = 400/852 (46%), Gaps = 115/852 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L +R E + S+ ++ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +PLK VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPLK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
+ H + + L ++R+ E+ Q A S+H E+ Y++ E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
D + A KA ++ A+ + D +++ + QL + + N LI +A
Sbjct: 564 DAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613
Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
A+ + H+ P + G++V V S D+ T++E D VQ G
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
++++V + + I SK+ A P ++ SG S GP +L
Sbjct: 672 LKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS-------GP-----STTL 711
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRG R ++A LD I A + +IHG+GTG ++ V + L+ + +V Y
Sbjct: 712 DLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYG-F 770
Query: 823 SPMNYGCTVAYI 834
+P N G + A I
Sbjct: 771 APQNAGGSGATI 782
>gi|261418293|ref|YP_003251975.1| recombination and DNA strand exchange inhibitor protein
[Geobacillus sp. Y412MC61]
gi|319767747|ref|YP_004133248.1| MutS2 family protein [Geobacillus sp. Y412MC52]
gi|261374750|gb|ACX77493.1| MutS2 family protein [Geobacillus sp. Y412MC61]
gi|317112613|gb|ADU95105.1| MutS2 family protein [Geobacillus sp. Y412MC52]
Length = 792
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 252/832 (30%), Positives = 405/832 (48%), Gaps = 100/832 (12%)
Query: 17 LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
LEE L +T A A+++ PLD + DI L A G LSP E+ V T
Sbjct: 48 LEEVAAWLEETDEAAAVLRLAGYAPLDGAV--DIRPHLKRAAIGGTLSPQELLEVAATSA 105
Query: 74 AVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
A + + + + E G D L Y+ EL++ + LE I ID + LD A
Sbjct: 106 ASRQMKRLIMDLHEEHGGLDRLSTYAD--ELVE----VPALEHDIRRSIDDHGEV-LDAA 158
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S+ L +R + + R E L+S+++ +AQ + +IT R R + +K ++
Sbjct: 159 SDRLRSLRGQIRSLEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYR 214
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+
Sbjct: 215 GAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEP 273
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ ++ + +D AFA+A +A+ + P ++S+ ++ F + +HPLL
Sbjct: 274 LARAVEALAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL------- 320
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
D E + VP DI++ + +VITGPNTGGKT +
Sbjct: 321 -------------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVT 352
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 353 LKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILR 412
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
LV ESLVL DE+G+GTDP EG ALA +IL + R V TTHY +L
Sbjct: 413 LVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVV 472
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V + H
Sbjct: 473 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV-----SAESHNV 527
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+ SL +++ E + A + E L E E + ++L+ A A+ TQ+
Sbjct: 528 ENMIASLERSKKQAEEEEARARAALEEAERLRAEWEQKWEELEEEKAERLAEATQKAADI 587
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
+ A+ + + ++Q+ ++ A+ + E++ +AA A + ++ S
Sbjct: 588 IRAAEREAERIIQELRRLQKEKQAEVKEHELVEAKQRLAA---AMPKVEKRKKAKKAASR 644
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
Q G++V V SL K + +V DD VQ G +++++++ ++ I ++ K+
Sbjct: 645 HVFQPGDEVKVTSLNQKGYLIEKV--SDDEWQVQLGILKMKIRERDLEYIGSASAKD-VT 701
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACW 785
P ++ + A S E LDLRG R E+A +L+ L A
Sbjct: 702 PIATVKGK-------DAHVSLE--------------LDLRGERYEDALIRLEKYLDDAVL 740
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
+ + +IHG GTG +++ V + L+ H V ++ + + G T+ +K
Sbjct: 741 AGYARVSIIHGKGTGALRQGVQQFLKQHRAVKSFRFGEANEGGTGVTIVELK 792
>gi|321312391|ref|YP_004204678.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis BSn5]
gi|320018665|gb|ADV93651.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis BSn5]
Length = 785
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 241/803 (30%), Positives = 390/803 (48%), Gaps = 100/803 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
DI G L A G +LSPSE + L AV + +T+ AE DG + PL+ + +
Sbjct: 70 DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124
Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
+ E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
I ++ +HPLL P V N
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ +
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + TTHY +L NA+ EF +ETL PTY++L G G SNA I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II +A+ + + + + SL + +++ E + S+ E L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551
Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 639
+E++ + +L+ + + + QQ +++ A + + ++ + + + + + + LI
Sbjct: 552 KELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRSIKEEHKSFKDHELIN 611
Query: 640 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
++ + + A +T F P G++V V + G K T++E G ++
Sbjct: 612 -AKKRLEGAMPAFEKSKKPEKPKTQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN- 666
Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 759
VQ G ++++VK+ ++ I ++ P P+ K A G
Sbjct: 667 VQIGILKMKVKEKDLEFIKSA-------PEPKKEKII-------------TAVKGKDYHV 706
Query: 760 SKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
S LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 707 SLE-LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHR 762
Query: 815 RV--AKYEQESPMNYGCTVAYIK 835
V +++ + G TV +K
Sbjct: 763 SVKSSRFGEAGEGGSGVTVVELK 785
>gi|410459253|ref|ZP_11313005.1| recombination and DNA strand exchange inhibitor protein [Bacillus
azotoformans LMG 9581]
gi|409930446|gb|EKN67445.1| recombination and DNA strand exchange inhibitor protein [Bacillus
azotoformans LMG 9581]
Length = 785
Score = 261 bits (668), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 242/809 (29%), Positives = 379/809 (46%), Gaps = 104/809 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I D+ L A G LS SE+ + T+ + K EA DG L S +
Sbjct: 65 LGGIFDVRPSLKRAQIGGDLSASELLDIASTIYGGRQI-KNFIEAMVEDGVELPILSSYI 123
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLLKKV 156
E L LT+LE KI CID + +D AS+ L + +R+ R E L+++ +
Sbjct: 124 EQLTT---LTDLERKIKNCIDDHGHV-MDGASDKLRSIRQTLRSAESRIREKLENMTRSS 179
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
AQ + I IT R R + +K ++ GI + S+SGAT F+EP+ VE N
Sbjct: 180 NAQKMLSDAI----ITIRNDRFVIPVKQEYRSAY-GGIVHDQSASGATLFIEPQAVVELN 234
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N E E IL LT +A+ + + + + EID FA+A F Q + P
Sbjct: 235 NTLQEARAKEKQEVERILHELTLFVAEDAESMLHNVKILTEIDFMFAKASFGQKIKASMP 294
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++ + + + +HPL+ D++
Sbjct: 295 KMNREGRIRLFKA------RHPLI--------------------DIKQV----------- 317
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP DI + + +VITGPNTGGKT ++KTLGL +LM++AGL +PA + + F
Sbjct: 318 ----VPNDIILGEDYSAIVITGPNTGGKTVTLKTLGLLTLMAQAGLQIPALDGSEMTVFS 373
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+ ADIGD QS+EQ+LSTFS H++ IV+IL+ V SLVL DE+G+GTDP EG ALA +I
Sbjct: 374 SVFADIGDEQSIEQSLSTFSSHMTNIVEILKQVDANSLVLFDELGAGTDPQEGAALAIAI 433
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + +R V TTHY +L + NA+ EF +ETL PTYR+L G G SNA
Sbjct: 434 LDDVYNRGAKVVATTHYPELKAYGYNRSGVINASVEFDVETLSPTYRLLLGVPGRSNAFE 493
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+K +G + +I+ A+ V ++ ++ + SL E +++ E + A + +
Sbjct: 494 ISKRLGLSQHVIENAKGYV-----SQETNKVENMIASLEESKKQAEEEWSEAEDIRKDAE 548
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEIN 635
L++E++ + + K + ++ + AK + +++D + A A + +
Sbjct: 549 HLHQELQKQIIAFYEERDKILEKAEEDAKEAIEKAKGDAEAIIRDLRKMKFNAAQAVKEH 608
Query: 636 SLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
LI E+ + V + + + P G++V V SL D+ +VE +
Sbjct: 609 ELI-EARKRLEEAVPTLQKNKKIVQKQKAKQKLLP--GDEVKVVSL-DQRGHIVEQVSEG 664
Query: 696 DTVLVQYGKMRVRVKKNNI----RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 751
+ VQ G ++++VK+ ++ RP P A P +R GS +
Sbjct: 665 E-FQVQIGILKMKVKEKDLEYISRPTP-----VATKPLATIR-----------GSEHH-- 705
Query: 752 SYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERV 806
K LDLRG R E+A + D LA + S S +IHG GTG +++ V
Sbjct: 706 --------VKPELDLRGERYEDAVLMVEKYIDDALLAGYPSVS---IIHGKGTGALRKGV 754
Query: 807 LEILRNHPRVAKYEQESPMNYGCTVAYIK 835
+ L+NH V Y G + Y++
Sbjct: 755 HDFLKNHRHVKAYRLGGMAEGGSGMTYVE 783
>gi|403387033|ref|ZP_10929090.1| recombination and DNA strand exchange inhibitor protein
[Clostridium sp. JC122]
Length = 788
Score = 261 bits (668), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 227/813 (27%), Positives = 393/813 (48%), Gaps = 90/813 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
+L E ++ L +T A ++ ++ P + I D+ +N A L+ ++ + L
Sbjct: 39 NLYEVKEHLEETKEAFKLLTTKGNPPFE--GIYDVREAINKAKKESSLTCEQLLRIASML 96
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRAS 132
+ + + ++ E +G Y L ++ + +LE++I I + + DRAS
Sbjct: 97 KCSRSFKEYISHKEEEEG-----YRVLEDICIGIVPIKKLEDEIFMAIVSEEEVS-DRAS 150
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLL 190
+DL IR R ++ S +K+ + +A + + L T R R + ++A +K +
Sbjct: 151 DDLYNIR----RKLKQKSSSVKEKVNSLLRANSKYLQENLYTIRGDRYVLPVRAEYKDQV 206
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P G+ + S++GAT F+EP V NN L E E IL LL+ ++ + I+
Sbjct: 207 P-GLIHDQSATGATLFIEPMSLVNLNNEIRELFIKEKKEVERILRLLSKKVTNNIELIEN 265
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ + E+D FA+A +A ++G+CP ++ + + IE ++HPL+ +
Sbjct: 266 DANILWELDFIFAKAKYASEINGICPEINDKGIIDL-----IE-VRHPLIDAKVV----- 314
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
VP + + E +VITGPNTGGKT ++KT
Sbjct: 315 ------------------------------VPNSVYLGREFTSLVITGPNTGGKTVTIKT 344
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL LM+ +G+ +PA+++ + +F + ADIGD QS+EQ+LSTFS H++ IV I+E
Sbjct: 345 VGLVHLMAMSGILIPARSNSVVSFFKNVYADIGDEQSIEQSLSTFSSHMTNIVGIIEEAD 404
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
SL L DE+GSGTDP+EG ALA SIL+ L+ R V TTHY++L K EN +
Sbjct: 405 ENSLCLFDELGSGTDPTEGAALAVSILENLKKRGCRVVATTHYSELKGYALKTLGVENGS 464
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKS 548
EF++ETL PTY++L G G SNA I++ +G II+ A++ + + L E
Sbjct: 465 VEFNVETLSPTYKLLIGVPGKSNAFEISRRLGLPEYIIKDAKENISTDSLNFE------- 517
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
EL QSL + K E+ AR A +L + L + E++ ++ + ++ + +
Sbjct: 518 ELIQSLQAKSIKAENDARMAEALKKDAEKLKEKYEEKLYKFEKARENALYSAQREAKNLI 577
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF 668
AK + DT +++ R + + ++E I +E + T
Sbjct: 578 KQAKEESDTALKNIREIERLGYSSDARKKLEEERKKIKDKLEHAELIETKKQEATGEKLK 637
Query: 669 TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANP 728
G++V++ L + + +V + V VQ G M++ VK ++R + + P
Sbjct: 638 KVNEGDEVYLPKLNQNVIVISKVDSRGE-VQVQAGIMKITVKFEDLR------KSKSIKP 690
Query: 729 APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWE 786
+RK ++ EA R++ + S+DLRGM EEA + +D L
Sbjct: 691 DKAIRKMEK-----------REAKL--RLKNTPTSVDLRGMDSEEAIYTVDKYLDDVYIA 737
Query: 787 SRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ +IHG GTG+++ + ++L+ HP V +
Sbjct: 738 GLGEVSIIHGNGTGILRSSINDLLKRHPHVKSH 770
>gi|206977729|ref|ZP_03238620.1| MutS2 family protein [Bacillus cereus H3081.97]
gi|206744030|gb|EDZ55446.1| MutS2 family protein [Bacillus cereus H3081.97]
Length = 786
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 236/835 (28%), Positives = 389/835 (46%), Gaps = 111/835 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGSAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+L + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + ++T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKM----LSDSIVTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLKQAC------HPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I++A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIEQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + + + S LDLRG R E A +++ L
Sbjct: 690 ---------KQTEKKAVATVKGRDYHVSL---------ELDLRGERFENAMARVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
A S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK 786
>gi|313893610|ref|ZP_07827179.1| MutS2 family protein [Veillonella sp. oral taxon 158 str. F0412]
gi|313441881|gb|EFR60304.1| MutS2 family protein [Veillonella sp. oral taxon 158 str. F0412]
Length = 812
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 200/701 (28%), Positives = 333/701 (47%), Gaps = 73/701 (10%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+LD AS L +R + E + + ++ + + +IT+R +R + +K +
Sbjct: 161 LLDTASPKLASLRNTIIKTREKIKNDIQAILHDKDNQKYFQETIITQRNNRYVIPVKQEY 220
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAK 243
+ DG+ + S++G T ++EP V NN L + I EE +L + L+A + +
Sbjct: 221 RQYF-DGLIHDRSATGQTLYIEPMRLVNLNN---ELQEALIGEEQEVLRIYRELSALVKQ 276
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
++ ++V I+ + +A A GV ILS+ D ++N+ +HPL+
Sbjct: 277 HSNDLMDACEKVSHIEFVYGKASLAISYKGVPAILST------DRTVNLMRARHPLI--- 327
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
P + VP +I + R+++ITG NTGG
Sbjct: 328 -------------P-------------------PNVVVPTNILLGTSYRILLITGSNTGG 355
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT S+KTLGL SLM++ GL++PA + LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 356 KTVSLKTLGLLSLMNQCGLFIPADHGSMLPVFHNIFADIGDEQSIEASLSTFSAHMTQVI 415
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L +V+THY +L
Sbjct: 416 SIIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRKKGALMMVSTHYNELKNYAYHT 475
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
EN EF TL+PTYR+ G G S+AL+IA +G + I+ RA + + +
Sbjct: 476 EGIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVTRAAE----YKSQFG 531
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
H E+ L E+ RK + R E + ++E E K + + + AK
Sbjct: 532 SHEMEEVLSDLNEQLRKASERERALKKELDETRRMRGQLEKEKKQFNEKRKQILAKAQAD 591
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ +V+ + +++ ++QL + + D+ S I + I+ + H PD
Sbjct: 592 AEAMKRSLRVEGEAIIKQLKSQLSETNKDKRQSAINAARKGISNV---HVPDAPVDDDRK 648
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 721
++ + G+ V V +L L TV+ + G+ V + V+V ++ R N
Sbjct: 649 TLTAEEVKVGQVVFVTTL-RSLGTVLSMKGNRVNVDINGLTATVKVNELQSTTREEGNKL 707
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 779
+ P+ RK R GSA +E + +++ G V+EA+ +
Sbjct: 708 EREQKAAMPKTRK----RMGGSAVQRQKEV---------RTEINILGQTVDEATVSVGRF 754
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
I A + + +IHG GTG ++E V + LR P VA +E
Sbjct: 755 IDQALLGGVNQVRIIHGKGTGALREGVHQYLRTLPHVAHFE 795
>gi|257877500|ref|ZP_05657153.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC20]
gi|257811666|gb|EEV40486.1| DNA mismatch repair protein MutS [Enterococcus casseliflavus EC20]
Length = 787
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 219/726 (30%), Positives = 352/726 (48%), Gaps = 106/726 (14%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS L IR +R E LD +++ A+ + ++T R R + +
Sbjct: 146 VTDDASPALRGIRQSIRRAERTIRETLDGIVRGGNAKY-----LSDTIVTMRNERYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE---TAILSLLTA 239
K ++ + G+ + SSSG T F+EPK VE NN RL +IAE T IL+ L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSSSGQTLFIEPKQVVEQNN---RLRQHQIAERDEITRILAELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+A +REI + + +D A+A F + M + P ++ +HV F + +HPL
Sbjct: 257 ELAPYQREILHNAYVIGIMDFMNAKARFGKEMKAIVPAINQDNHVFFKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + VVITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDITIGKDYQAVVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL +M +AGL + A+ ++ F+ I ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQIMGQAGLPILAEEESQMGVFNEIFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ IV++L+ V SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TTIVEVLKKVDETSLVLFDELGAGTDPQEGAALAIAILDELGAKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
+ NA+ EF ++TL PTYR+L G G SNA I+K +G II +A++++
Sbjct: 456 GYNRSNTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISKRLGLPDTIIDQAKEIM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQ-------ARTAASLHAEIMDLYRE-IEDEAKDLDR 591
+ + +E+ L R+ E++ + AA LH E+ Y E+ K+L
Sbjct: 512 -DGESQDLNEMIADLENRRKMTETEYLEVRHHVKEAARLHQELEAAYSYFFEEREKEL-- 568
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVE 650
AK Q+ Q + AK + + ++ D QL + ++ + ++ + +
Sbjct: 569 ------AKARQKANQIVEEAKEESEKIIADIRKMQLAGGQTKVKEHELIDARTKLSGLQQ 622
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
+ V + ++ T + G++V V S G + +++ G + VQ G +++ +
Sbjct: 623 EEHLQKN-KVLQKAKAAKTLKEGDEVLVTSYGQR-GVLLKKAGKNQW-QVQIGILKMNLP 679
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
+ +++P K P R+ ++ A P V N LDLRG R
Sbjct: 680 ETDLQPAAPVK-----EPTQRIV------------NTIRSADSSPVV----NQLDLRGKR 718
Query: 771 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
EEA +++D L A + ++HG GTG +++ + + L+NH V +E +P N G
Sbjct: 719 YEEALNEVDQYLDAAILAGYPQVTIVHGKGTGALRQGITDYLKNHRSVKSFEF-APANQG 777
Query: 829 CTVAYI 834
A I
Sbjct: 778 GNGATI 783
>gi|423449119|ref|ZP_17425998.1| MutS2 protein [Bacillus cereus BAG5O-1]
gi|401128568|gb|EJQ36257.1| MutS2 protein [Bacillus cereus BAG5O-1]
Length = 786
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 233/817 (28%), Positives = 383/817 (46%), Gaps = 109/817 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + S PL I D+ + A G +LSP+E+ + T+ N+
Sbjct: 45 ELQDTTDEAAKVIRLKGSAPL--GGITDVRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+LE + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRNQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++ + QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIHEL-RQLRKAQLVNVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK+ N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKEFNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + S + S LDLRG R E+A +++ L
Sbjct: 690 ---------KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A S + +IHG GTG +++ V + L+ H V Y
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|407796063|ref|ZP_11143019.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
gi|407019417|gb|EKE32133.1| DNA mismatch repair protein MutS [Salimicrobium sp. MJ3]
Length = 781
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 237/814 (29%), Positives = 394/814 (48%), Gaps = 105/814 (12%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L E KL N+T A +++ + + I +I L G +LS +E V T+
Sbjct: 40 LPEVVKLQNETDEAQQVLRLKGHIPFGGIRNIKPHLKRTSIGGVLSATECVDVATTIYGG 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ + + E E D P+L EL+ + L LE I ID +++D AS+
Sbjct: 100 KELKRFVEEMEEPD-------MPILRELVDIIHPLPILERTIRNSIDDNG-VVMDGASDT 151
Query: 135 LELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
L IR+ R + ++S K+ + ++ A ++T R R + +K ++ +
Sbjct: 152 LRSIRSRINTLESRLRDKMESYTKQQSEKLSDA------IVTIRNERYVLPVKQEYRGSI 205
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT--AEIAKSEREI 248
GI + SSSGAT F+EP+ V+ NN L + + E+ + +L +E + +R I
Sbjct: 206 K-GIVHDQSSSGATLFIEPQPVVDINN---DLQEARVQEKREVDRILGELSEAIEEDRPI 261
Query: 249 KYLMDRVLE-IDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
RVL +D FARA + M P ++++ + + +HPL+
Sbjct: 262 LAENVRVLAGLDFIFARAKLGRSMGAAMPAMNNEGRILMKQA------RHPLI------- 308
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
SE V VP DI++ + ++ITGPNTGGKT +
Sbjct: 309 -----------------SEEEV-----------VPNDIELGTDFTSIIITGPNTGGKTVT 340
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+K +GL +LM++AGL +PA + L FD + ADIGD QS+EQ+LSTFS H++ IVDIL+
Sbjct: 341 LKLVGLCTLMAQAGLQIPAMDGCELAVFDNVYADIGDEQSIEQSLSTFSSHMTNIVDILD 400
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V +LVL DE+G+GTDP EG ALA +IL + D+ + TTHY +L
Sbjct: 401 KVDDSTLVLFDELGAGTDPQEGAALAMAILDEVVDKDARVIATTHYPELKAYGYNRENVV 460
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF++ETL PTYR+L G G SNA I++ +G +I A+ ER+ + +
Sbjct: 461 NASVEFNIETLEPTYRLLIGVPGRSNAFEISRRLGLREDVISAAK---ERVGVDSES--V 515
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+ SL E RR+ E+ A + E ++Y E+ E K + + L K ++ +Q
Sbjct: 516 ESMIASLDEARREAEADYERAEEIRREAEEIYSELNSEWKRFEDQKEKLYKKAEEKAKQS 575
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
++ A+ + +V + + Q++++S + + I+ + A E + + ++N +
Sbjct: 576 VDKAREEAQGIVDELK-QMKNSSELKEHEWIEARKMFDEAEPELTKKEKQPKNKQSNETK 634
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
Q G++V + +L ++ +VE G +D VQ G M+V+ K+ ++ + K +
Sbjct: 635 EL-QAGDEVKLLTL-NQQGVIVE-KGRNDEYQVQVGSMKVKAKRKDLEFVKTKKPEREKQ 691
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS--KNSLDLRGMRVEEASHQLDIAL--A 783
AP R +TS K LDLRG R E+A ++L+ L A
Sbjct: 692 IAP------------------------VRGKTSHVKPELDLRGERYEDALNRLEKYLDDA 727
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 817
+ +IHG GTG +++ V + + H R++
Sbjct: 728 LLAGYPQVSIIHGKGTGALRQGVQSLAKRHSRIS 761
>gi|229032198|ref|ZP_04188171.1| hypothetical protein bcere0028_42400 [Bacillus cereus AH1271]
gi|228728978|gb|EEL79981.1| hypothetical protein bcere0028_42400 [Bacillus cereus AH1271]
Length = 786
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 233/817 (28%), Positives = 384/817 (47%), Gaps = 109/817 (13%)
Query: 19 ESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV 78
E Q ++ + + + + PL I DI + A G +LSP+E+ + T+ N+
Sbjct: 45 EMQDTTDEAAKVIRLKGNAPL--GGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNM 102
Query: 79 WKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K+ E +G L P+L + L +LE+KI CI ++ D AS+ L
Sbjct: 103 -KRFIEDMVDNGVEL----PILATHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRG 156
Query: 138 IRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR + R E L+++ + AQ + I +T R R + +K ++ + G
Sbjct: 157 IRTQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GG 211
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I + S+SG T F+EP+ VE NN E E IL +LT E+A + ++
Sbjct: 212 IVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVE 271
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
V +D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 272 VVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI------------- 312
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 --DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGI 350
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ES
Sbjct: 351 CVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFES 410
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF
Sbjct: 411 LVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEF 470
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ TL PTY++L G G SNA I+K +G ++I +A+ + ++ +
Sbjct: 471 DVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI-----STDTNKIENMIAK 525
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKV 613
L E ++ E A +L + L+RE++ + + + K ++ ++++ AK
Sbjct: 526 LEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKK 585
Query: 614 QIDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSF 668
+ + ++Q+ QLR A + + LI+ E A +V+ + N +
Sbjct: 586 EAEGIIQEL-RQLRKAQLINVKDHELIEAKSRLEGAAPELVKKQK---------VNVKNT 635
Query: 669 TPQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 636 APKQQLRAGDEVKVLTFGQKGQLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP---- 689
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
KQ E + S + S LDLRG R E+A +++ L
Sbjct: 690 ---------KQTEKKAVASVKGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDD 731
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A S + +IHG GTG +++ V + L+ H V Y
Sbjct: 732 AQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNY 768
>gi|56421228|ref|YP_148546.1| recombination and DNA strand exchange inhibitor protein
[Geobacillus kaustophilus HTA426]
gi|81675734|sp|Q5KWF8.1|MUTS2_GEOKA RecName: Full=MutS2 protein
gi|56381070|dbj|BAD76978.1| DNA mismatch repair protein [Geobacillus kaustophilus HTA426]
Length = 784
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 249/830 (30%), Positives = 399/830 (48%), Gaps = 96/830 (11%)
Query: 17 LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
LEE L++T A A+++ PLD + DI L A G LSP E+ V T
Sbjct: 40 LEEVAAWLDETDEAAAVLRLAGYVPLD--GVVDIRPHLKRAAIGGTLSPQELLEVAAT-S 96
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
A + K+L + L+R + L ELE + ID + LD AS+
Sbjct: 97 AASRQMKRLIAGLYDEHGGLERLFRYADTLAEA---PELEHDVRRSIDDHGEV-LDAASD 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L +R + + R E L+S+++ +AQ + +IT R R + +K ++
Sbjct: 153 RLRSLRGQIRSVEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYRGA 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+ +
Sbjct: 209 Y-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEPLA 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
++ + +D AFA+A +A+ + P ++S+ ++ F + +HPLL
Sbjct: 268 RTVEALAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
D E + VP DI++ + +VITGPNTGGKT ++K
Sbjct: 313 -----------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL V
Sbjct: 347 TIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
ESLVL DE+G+GTDP EG ALA +IL + R V TTHY +L NA
Sbjct: 407 DGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVVNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V + H
Sbjct: 467 SVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV-----SAESHNVEN 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL +++ E A + E L E E + ++L+ A A+ TQ+ +
Sbjct: 522 MIASLERSKKQAEEDEARARAALEEAERLRAEWEQKWEELEEEKAERLAEATQKAADIIR 581
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
A+ + + ++Q+ ++ A+ + E++ +AA A + ++ S
Sbjct: 582 AAEREAERIIQELRRLQKEKQAEVKEHELVEAKQRLAA---AMPKVEKRKKAKKAASRHV 638
Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 729
Q G++V V SL K + +V DD VQ G +++++ + ++ I ++ K+ P
Sbjct: 639 FQPGDEVKVTSLNQKGYLIEKV--SDDEWQVQLGILKMKIHERDLEYIGSAPAKD-VTPI 695
Query: 730 PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWES 787
++ + A S E LDLRG R E+A +L+ L A
Sbjct: 696 ATVKGK-------DAHVSLE--------------LDLRGERYEDALIRLEKYLDDAVLAG 734
Query: 788 RSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
+ + +IHG GTG +++ V + L+ H V ++ + + G T+ +K
Sbjct: 735 YARVSIIHGKGTGALRQGVQQFLKQHRAVKSFRFGEANEGGTGVTIVELK 784
>gi|167749635|ref|ZP_02421762.1| hypothetical protein EUBSIR_00593 [Eubacterium siraeum DSM 15702]
gi|167657388|gb|EDS01518.1| MutS2 family protein [Eubacterium siraeum DSM 15702]
Length = 793
Score = 261 bits (666), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 210/711 (29%), Positives = 339/711 (47%), Gaps = 99/711 (13%)
Query: 129 DRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
D AS L IR +R E LD L+K + Q + + + L+T R R V +K
Sbjct: 144 DSASPQLAAIRRSIQRKSLAVRERLDKLIKSQSTQKY----LQESLVTMRDGRFVVPVKT 199
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE-------IAEETAILSLL 237
+K + G+ + S++GAT F+EP VE NN E+R+ E I +E + L
Sbjct: 200 EYKSEIS-GLVHDTSATGATLFIEPMAVVEANN-EIRVLQIEEQKEIERIIKEMSELVGS 257
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKH 297
AE ++ EI VL +++ FA+A M V P+++ + N+ +H
Sbjct: 258 FAEPMINDYEI------VLMLEIYFAKANLGAKMKAVTPVITDKP------CFNLIRARH 305
Query: 298 PLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVIT 357
PL+ D VPI +++ + +++T
Sbjct: 306 PLI-----------------------------------DKDKVVPISLELGNDYSSLIVT 330
Query: 358 GPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSG 417
GPNTGGKT S+KT GL LM+ G+ +PA + + FD + DIGD QS+EQ+LSTFS
Sbjct: 331 GPNTGGKTVSLKTAGLLVLMAMCGMMIPASENSVIGMFDELYVDIGDEQSIEQSLSTFSS 390
Query: 418 HISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLS 477
H++ I IL +SL+++DE+ SGTDP EG ALA SIL R R + TTHY ++
Sbjct: 391 HMTNIARILRTADEKSLIMLDELCSGTDPVEGSALAVSILDEFRKRDCKVIATTHYQEVK 450
Query: 478 CLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER 537
K ENA+ EF ++TLRPTYR++ G G SNA I+ +G II A++LV
Sbjct: 451 MYAIKTDNVENASCEFDIKTLRPTYRVIVGMPGKSNAFAISSKLGISSDIIDNAKELV-- 508
Query: 538 LRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
+ R E+ QSL + R++LE +AA+ + ++ +++ E L++ K
Sbjct: 509 ---STEDKRFEEVVQSLEKTRQELEKLKSSAAAEQKKSKEITEQLKAERDQLEKD----K 561
Query: 598 AKETQQVQQE----LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
KE Q V+ + + + Q D ++++ E + + + +K + S I + V
Sbjct: 562 EKELQDVRSKAASIIEEVRFQGDLMLEELERLRKQKESADFAQKVKGARSHINSSVNGMY 621
Query: 654 PDDDFSVSETNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
+ + + P + G+ V + L +K T++ +P + VQ G M+ + K
Sbjct: 622 DTANPIMQKKIDHYVLPRPLKVGDTVRLADL-NKEGTLLRLPDSKNMCFVQVGAMKTKTK 680
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
N+R + K+++ P P + G SN G LD+RGM
Sbjct: 681 LENLRLV-EEKKESKKQPTP--------SKVGKKLVSNFSRKSG-------MELDIRGML 724
Query: 771 VEEASHQLDIAL-ACWESR-SVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
++ ++D + +C S SV+ +IHG GTG ++ V + LR +P V +
Sbjct: 725 GDDGVMEVDRFIDSCLLSGISVITIIHGKGTGALRSAVQQYLRKNPHVKSF 775
>gi|452975414|gb|EME75233.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sonorensis L12]
Length = 785
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 250/839 (29%), Positives = 408/839 (48%), Gaps = 109/839 (12%)
Query: 15 KSLEESQKL---LNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
+SLEE +KL +++ L + S P + DI L A G LLSP+E +
Sbjct: 38 RSLEEVKKLQEEVDEAGTVLRLKGSAPF--GGLSDIRKALKRAEIGSLLSPAEFTEISGL 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
L A + K E DG + P L + + L++LE+ I CID + LD
Sbjct: 96 LYAAKQM-KHFLEGLFEDGVEI----PFLHQYAEKLIPLSDLEKDINSCIDDHGEV-LDH 149
Query: 131 ASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
ASE L IR + + R + L+++L+ +AQ + +IT R R + +K +
Sbjct: 150 ASESLRGIRTQLRTLESRIRDRLEAMLRSSSAQKM----LSDTIITIRNDRFVIPVKQEY 205
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + SSSGAT F+EP+ V+ NN + +E E IL +LT + A+
Sbjct: 206 RSSY-GGIVHDQSSSGATLFIEPQVIVDMNNSLRQAKVNEKQEIERILRMLTDKTAEHTD 264
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
E+ + + + +D FA+A +A+ V PI+++ +V + +HPLL
Sbjct: 265 ELFHNVKVLQTLDFIFAKAKYAKATKAVKPIVNADGYVRLIQA------RHPLL------ 312
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
P +D VP DI++ E +VITGPNTGGKT
Sbjct: 313 ----------P-------------------ADQVVPNDIELGGEYTTIVITGPNTGGKTV 343
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL +LM+++GL++PA FD + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 344 TLKTLGLLTLMAQSGLHVPAGEGSETAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDIL 403
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ ++ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L
Sbjct: 404 KDMTENSLVLFDELGAGTDPQEGAALAISILDEVYQTGARVIATTHYPELKAYGYNRDNV 463
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NA+ EF +ETL PTY++L G G SNA I+K +G +I RA + + +
Sbjct: 464 INASVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHLIGRA-----KAEMTAEHNE 518
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+ SL + +++ E++ ++ AE L+R+++ + + + L + Q+ +
Sbjct: 519 VDTMIASLEDSKKRAETELAETEAIRAEAETLHRDLKRQISEWQEKKDRLYEEAEQKAAE 578
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEINSLI---KESESAIAAIVEAHRPDDDFSVSET 663
++ A + D ++Q D A + + LI K E A+ + + +P +
Sbjct: 579 KVREAVKEADEIIQSLRMIKEDHKAFKDHELIDAKKRLEEAVPSFEKTKKP----VQKKM 634
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
+ + P G++V V + G K T++E D + VQ G ++++VK+ ++ + +
Sbjct: 635 DKRALKP--GDEVKVLTFGQK-GTLLE-KTDANEWNVQIGILKMKVKEKDLEFLKS---- 686
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL----- 778
AP KQQ + + + Y ++ LDLRG R E A H++
Sbjct: 687 -----APEPEKQQ-------SIAKVKGKDYHVSLE-----LDLRGERYENALHRVEKYLD 729
Query: 779 DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
D LA + S +IHG GTG +++ V ++L++H V +++ + G T+ +K
Sbjct: 730 DAVLAGYPRVS---IIHGKGTGALRKGVQDLLKSHRNVKNSRFGEAGEGGSGVTIVELK 785
>gi|430882566|ref|ZP_19484114.1| MutS2 protein [Enterococcus faecium E1575]
gi|430556811|gb|ELA96306.1| MutS2 protein [Enterococcus faecium E1575]
Length = 786
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 216/728 (29%), Positives = 351/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAKKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|260584040|ref|ZP_05851788.1| DNA mismatch repair protein MutS [Granulicatella elegans ATCC
700633]
gi|260158666|gb|EEW93734.1| DNA mismatch repair protein MutS [Granulicatella elegans ATCC
700633]
Length = 785
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 255/867 (29%), Positives = 409/867 (47%), Gaps = 160/867 (18%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQ-SQPLDLSTIEDIAGILN-----SAVSGQLLSPS 63
Q+P + ++ + + +T A+ +++ Q + + +EDI+ + + ++G+ LS
Sbjct: 33 QLPIETNAKKIRHKIEETRDAVTLLRLKQGIPIPKLEDISVSIKRLEVEAGLNGRELS-- 90
Query: 64 EICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--D 121
EI V +T V N ++K+ E E+ D L +L++ +L E+ +++ I D
Sbjct: 91 EILKVLQTTNQVANFFEKVKEE-EITLDRLP------QLVEKLEYLPEISKQLQLSIRED 143
Query: 122 CKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
+LD AS L+ IR R + + L + A + LIT R R V
Sbjct: 144 G---YVLDDASIPLKGIRQGISRTEQEIKGQLDTYVTGKY-AKYLTDSLITIRNDRYVVP 199
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+KA +K GI + S++G T FMEP+ V NN +L + ++ E+ + +L
Sbjct: 200 VKAEYKSTF-GGIVHDQSATGQTLFMEPQAIVNLNN---KLRDYQLQEKKEVERILLELS 255
Query: 242 AK------SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
K S + Y++ R +D+A A+A +A+ + PI+ ++HV+ I
Sbjct: 256 EKLMPHTPSLTQNHYVLSR---LDIANAKALYAKQIKANEPIIDEENHVA------IWQA 306
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
+HPL+ +P KS V N DI + E + +V
Sbjct: 307 RHPLI---------------SP-KSVVAN-------------------DIILGQEYQSIV 331
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT +KT+G+ LM++ GLY+PA R+ F I ADIGD QS+EQNLSTF
Sbjct: 332 ITGPNTGGKTILLKTIGIIQLMAQMGLYIPALPDSRVGVFTQIFADIGDEQSIEQNLSTF 391
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
S H+S IV IL + +SLVL+DEIGSGTDP EG +LA +IL Y+ + + TTHY +
Sbjct: 392 SSHMSNIVSILNKIDEKSLVLMDEIGSGTDPQEGASLAIAILDYIGTKQSYVIATTHYPE 451
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L NA+ EF +TL+PTYR L G G SNA +I+ +G + +I++A++ +
Sbjct: 452 LKVYGYNRVGTINASMEFDSDTLQPTYRFLLGVPGRSNAFDISARLGLPKVVIEQARQFI 511
Query: 536 --------------ERLRP---------ERQQHRKSELYQSL-MEERRKLESQARTAASL 571
ER R ++Q S+L ++L +E E++AR
Sbjct: 512 SVESQELNEMISDLERKRRIVDQEKSVIQQQLKESSQLLEALKLETENFKENKARLIEQA 571
Query: 572 HAEIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 629
+ +L + +++A+ + D RA LK+KET + EL ++ T + D L+
Sbjct: 572 KEKANELVAQSQEDAEKILSDIRAMQLKSKETVVKEHEL----IEKKTALTD----LKHE 623
Query: 630 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
+ N ++K E S P G+ V V S G + T+V
Sbjct: 624 QVLKKNKVLKR---------------------EKAKKSLRP--GQSVEVTSFGQR-GTLV 659
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
E + + V VQ G +++++ ++ I + + P + K S+ S E
Sbjct: 660 EKISEQEWV-VQMGIIKMKLPVEDLISI----EEEPSKPTQVIVKSHR-----SSHVSTE 709
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 807
LDLRG R EEA L++ L A + +IHG GTG +++ V
Sbjct: 710 --------------LDLRGKRYEEAIKDLELFLDAALLAGYPRVTIIHGRGTGAIQQGVH 755
Query: 808 EILRNHPRVAKYEQESPMNYGCTVAYI 834
+ L+ H VA YE +PMN G A +
Sbjct: 756 KTLKKHRSVASYE-FAPMNMGGNGATV 781
>gi|340758447|ref|ZP_08695034.1| MutS2 protein [Fusobacterium varium ATCC 27725]
gi|251836770|gb|EES65304.1| MutS2 protein [Fusobacterium varium ATCC 27725]
Length = 778
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 228/775 (29%), Positives = 381/775 (49%), Gaps = 134/775 (17%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL- 149
D L +Y L + + L +E+ I ID I D AS DL IR +K N+
Sbjct: 108 DDLNKYKDLRDKFNDVPILRGVEDIINKAIDNNKEI-KDDASLDLRDIRIHKKTLAMNIK 166
Query: 150 ---DSLLKKVA-AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATY 205
D L + A++FQ + +IT+R R V +KA K + GI + SSSG T
Sbjct: 167 RKFDELFNEPQFAKVFQ-----EKIITERDGRSVVPVKADFKGQIK-GIEHDRSSSGQTV 220
Query: 206 FMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARA 265
F+EP V NN L E E IL +T I ++ +I + + ++ +D+ ARA
Sbjct: 221 FIEPLSIVALNNKNRELEIKEKEEIRKILLRITDYIRNNKDDIDKVGEAIITLDILNARA 280
Query: 266 GFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENS 325
+ V P ++++ ++ IE +HP + SS+
Sbjct: 281 MYGIEKKCVVPNINNREILTL-----IEA-RHPFIPISSV-------------------- 314
Query: 326 EMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLP 385
VP+ ++ + ++ITGPNTGGKT ++KT GL +LM+ +G+ +P
Sbjct: 315 ---------------VPLTFEIGKDYNTLLITGPNTGGKTVALKTAGLLTLMALSGIPIP 359
Query: 386 AKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTD 445
A H + +F + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTD
Sbjct: 360 AHEHSSIGFFTGVYADIGDEQSIEQSLSSFSAHLKNVQEILENVTKASLVLLDELGSGTD 419
Query: 446 PSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRIL 505
P+EG A A +++ YL+D+ +++TTHY+++ + E A+ EF++ETL PTYR+L
Sbjct: 420 PTEGSAFAMAVIDYLKDKKCKSIITTHYSEVKAHGYNEEGIETASMEFNVETLSPTYRLL 479
Query: 506 WGSTGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQ----HRKSE- 549
G G+SNAL IA+ +G ++I +A +K++ ++ + + ++ E
Sbjct: 480 IGIPGESNALTIARRLGVSEEVINKAKSYISDDNKKIEKMISNIKDKADELDVMKKQVEF 539
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA----KDLDRRAAHLKAKETQQVQ 605
L ++ ++ E + R L E D+ +E ++A K++ +AA L +++Q
Sbjct: 540 LKEAAQRDKEAFEEKLRI---LEKEKNDILKEAYEKADRMMKEMQSKAAAL----VEKIQ 592
Query: 606 QELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
+E N K I V + N LR A +D+ ++I++ + A DF V
Sbjct: 593 KEDN-KKEDIKNVQKSL-NMLRSALQSDKSKTVIEKPKVARKV---------DFKV---- 637
Query: 665 TSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKN 724
GE+V V SL ++ A V+++ +T VQ G +++ V ++++ + K+K
Sbjct: 638 --------GERVFVNSL-NQFANVLKINLSKETTQVQAGILKLEVSLDDVKVVEEKKQK- 687
Query: 725 AANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL-- 782
N S+ + ++ +DLRG V+EA ++L+ L
Sbjct: 688 VYN------------------------SFSHKKTAVRSEIDLRGKMVDEAVYELETYLDR 723
Query: 783 ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
A S + ++VIHG GTG ++E +L L+ P V +Y GCTV +K
Sbjct: 724 AIMNSYNEVYVIHGKGTGALREGILNYLKKCPYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|365924477|ref|ZP_09447240.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|420265357|ref|ZP_14767919.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
20444]
gi|394428189|gb|EJF00772.1| DNA mismatch repair protein [Lactobacillus mali KCTC 3596 = DSM
20444]
Length = 786
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 238/803 (29%), Positives = 385/803 (47%), Gaps = 127/803 (15%)
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFC 119
L+ E+ AV + LRA N V + + LD ++++ S L EL + L E+ +++
Sbjct: 84 LNGKELAAVSKVLRATNEVRRFFVK---LDDEAIELAS-LDELAADLQVLPEVNKRLLTS 139
Query: 120 IDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRR 175
I+ + D AS L IR R++ ++ L+ + G K L IT R
Sbjct: 140 IEGDGHVT-DEASTALAGIR----RSIAAIEGQLRD-QLNVLVHGNSSKYLSDAVITIRN 193
Query: 176 SRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILS 235
R + +K ++ G+ + S+SG T F+EPK VE NN + ++E E IL
Sbjct: 194 DRYVIPVKQEYRSHF-GGVVHDQSASGQTVFVEPKQIVELNNRLKQQQSNEKEEVARILR 252
Query: 236 LLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
L+ IA EI+ + + D A+A +A + P+LS+++ V + +
Sbjct: 253 ELSQLIAPYTTEIRQNVYLLGVFDFVNAKAQYAAQIKATEPLLSTENKVY------LRQV 306
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
HPLL +K+ V N DI + + R +V
Sbjct: 307 WHPLL----------------DMKAAVRN-------------------DIMLGDDYRAIV 331
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
+TGPNTGGKT ++KTLGL LM +AGL++PA R+ FD I ADIGD QS+EQ+LSTF
Sbjct: 332 VTGPNTGGKTITLKTLGLVQLMGQAGLFIPAFEESRIGIFDNIFADIGDEQSIEQSLSTF 391
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
S H++ IV IL + +SL+L DE+G+GTDP EG ALA SIL Y+ + + TTHY +
Sbjct: 392 SSHMTNIVSILSEIDDKSLILFDELGAGTDPQEGAALAISILDYVGSKSSYVMATTHYPE 451
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
L + + NA+ EF +E+L+PTY +L G G SNAL+I+K +G D II +A++L
Sbjct: 452 LKAYGYERPQTINASMEFDIESLKPTYHLLLGIPGRSNALDISKKLGLDDVIIMQAKQLT 511
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASLHAEIMDLYREIEDEAKD 588
Q +++ Q L+ +R ++E ++ + LH ++ Y E ++ ++
Sbjct: 512 -----AGQNQDLNDMIQDLVAKRHQVEEESIELHKNLEESRKLHDDLGKKYDEFVNQREN 566
Query: 589 L---DRRAAH----LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA-----DEINS 636
L RR + AK+++++ EL ++ T ++ E++L A A ++ +
Sbjct: 567 LLDNARRKGNEIVEQAAKKSEKIIAELRKMRLNAGTTIK--EDKLISAKARLNALEQPTN 624
Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 696
L K A + +PDDD V VKS G + ++ G+ +
Sbjct: 625 LKKNRVLRRAKEKQILKPDDD------------------VLVKSYGQR-GVLLRKAGNHE 665
Query: 697 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 756
VQ G ++++V + ++ + + K A +R S S+N P
Sbjct: 666 WE-VQLGILKMKVAEGDLEKVKVEENKRTA-----IRT--------SVKSAN-ATHVSP- 709
Query: 757 VQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
+LDLRG R EEA ++D L A S + ++HG GTG +++ + + L
Sbjct: 710 ------TLDLRGERYEEALVKVDRYLDAAVLAGYSTVTIVHGKGTGALRQGITDFLSQSR 763
Query: 815 RVAKYEQESPM--NYGCTVAYIK 835
V ++ +P G TV Y K
Sbjct: 764 AVKSFKFAAPNAGGNGATVVYFK 786
>gi|116494335|ref|YP_806069.1| MutS family ATPase [Lactobacillus casei ATCC 334]
gi|122264237|sp|Q03AZ5.1|MUTS2_LACC3 RecName: Full=MutS2 protein
gi|116104485|gb|ABJ69627.1| MutS family ATPase [Lactobacillus casei ATCC 334]
Length = 786
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 243/852 (28%), Positives = 402/852 (47%), Gaps = 115/852 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L +R E + S+ ++ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +P K VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPGVIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
+ H + + L ++R+ E+ Q A S+H E+ Y++ E
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-- 562
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
R A +AK+ + ++ A+ + D +++ + QL + + N LI +A
Sbjct: 563 ---RDAQLQQAKD--KANTLVDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613
Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
A+ + H+ P + G++V V S D+ T++E D VQ G
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
++++V + ++ I +SK+ A P ++ SG S GP +L
Sbjct: 672 LKMKVPTDELKKIKSSKQSAAQRPVVKV--------SGGGMS-------GP-----STTL 711
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRG R ++A LD I A + +IHG+GTG ++ V + L+ + +V Y
Sbjct: 712 DLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYG-F 770
Query: 823 SPMNYGCTVAYI 834
+P N G + A I
Sbjct: 771 APQNAGGSGATI 782
>gi|81428007|ref|YP_395006.1| MutS family DNA mismatch repair protein [Lactobacillus sakei subsp.
sakei 23K]
gi|123564679|sp|Q38YN3.1|MUTS2_LACSS RecName: Full=MutS2 protein
gi|78609648|emb|CAI54694.1| DNA mismatch repair protein, MutS family [Lactobacillus sakei
subsp. sakei 23K]
Length = 787
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 233/809 (28%), Positives = 388/809 (47%), Gaps = 105/809 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L +E+I L G +L+ SE+ + R LRA + V + + L+ D L+ L
Sbjct: 65 LPQLENIRPHLKRIEIGAMLNGSELAQIGRVLRATSAVVRFFDD---LEKDELE-LKALP 120
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
EL+ L +L E+I + ILD AS L +R ++ L+ ++ A
Sbjct: 121 ELVAQFVTLPQLTERIRSSV-ADDGAILDTASTKLRGLRT----GLKQLEGQIRSRMASY 175
Query: 161 F---QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+A + P++T R R + +K ++ G+ + S+SG T FMEP+ +E NN
Sbjct: 176 THGAKAKYLSDPIVTIRNDRYVIPVKQEYRGQF-GGVVHDQSASGQTLFMEPQAIMELNN 234
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
+L E E IL+ L+ I I + + ++D A+A A+ + P+
Sbjct: 235 RLRQLQIEEQQEIERILAELSEAIMPERHNILANAELLGQLDFVNAKAQLAKALKATEPL 294
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
+++++HV + +HPL+ + +
Sbjct: 295 INAENHVDLKQA------RHPLIDATKV-------------------------------- 316
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
V DI + + + +V+TGPNTGGKT ++KTLGL +M+++GL++ A+ ++ F
Sbjct: 317 ---VANDIAIGADYQAIVVTGPNTGGKTITLKTLGLVQVMAQSGLFITAREESQVGVFSD 373
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
I ADIGD QS+EQNLSTFS H+ I+ IL+ + SLVL+DE+G+GTDP EG ALA +IL
Sbjct: 374 IFADIGDEQSIEQNLSTFSAHMENIIQILKQIDDRSLVLLDELGAGTDPQEGAALAIAIL 433
Query: 458 QYLRDRVGL----AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
D++G+ V +THY +L + NA+ EF + TL+PTYR+L G G SN
Sbjct: 434 ----DQIGIVGANVVASTHYPELKIYGYNRPQTINASMEFDVATLQPTYRLLIGVPGRSN 489
Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
A +I+ +G I+ +A++L + E Q + + L +R+ E++ +
Sbjct: 490 AFDISTRLGLPNSIVDQAKQL---MNDESQD--LNNMITDLENQRKAAETEYQALRHELT 544
Query: 574 EIMDLYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
E DL++++ + DR KAKE E A+V+ D V+ +LRD
Sbjct: 545 EATDLHQQLSTAYQQFFEDRETEMTKAKEKANAIVEK--AEVKADKVI----TKLRDMQM 598
Query: 632 DEINSLIKESE--SAIAAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLAT 687
++ + IKE++ A A + + H+ V + T + G+ V V S G +
Sbjct: 599 NQ-GAQIKENQLIDAKAELGQLHQETTLKKNKVLQRAKRRQTLKVGDDVLVTSYGQRGTL 657
Query: 688 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 747
+ +V D VQ G +++++ +++ K+K + P Q+ S G+
Sbjct: 658 IRQV--DSKNWEVQMGIIKMKIANDDL-----EKQKVVEDNRP----QRHVTTVNSGGAR 706
Query: 748 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKER 805
+ +A LDLRG R EEA ++D I A + + ++HG GTG +++
Sbjct: 707 HVKA-----------QLDLRGKRYEEAMAEVDQYIDAALLANYQQVTIVHGKGTGAIRQG 755
Query: 806 VLEILRNHPRVAKYEQESPMNYGCTVAYI 834
V E L+ + +V KYE +P N G A I
Sbjct: 756 VQEYLQANRQVKKYEY-APANAGGNGATI 783
>gi|425055377|ref|ZP_18458853.1| MutS2 family protein [Enterococcus faecium 505]
gi|403034046|gb|EJY45521.1| MutS2 family protein [Enterococcus faecium 505]
Length = 786
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 216/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHNDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVIIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|149183061|ref|ZP_01861514.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. SG-1]
gi|148849242|gb|EDL63439.1| recombination and DNA strand exchange inhibitor protein [Bacillus
sp. SG-1]
Length = 786
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 241/817 (29%), Positives = 380/817 (46%), Gaps = 102/817 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+LEE ++ +T A ++++ + L I DI + A G +L P E V T+RA
Sbjct: 39 TLEEVIRIQEETDEAASILRMKGHAPLGGIFDIRPAVKRATIGGMLGPQEFVQVASTIRA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ + E L E + LT LE KI +D ILD AS+
Sbjct: 99 SRQFRLFMEDLEEE---EELELPILTEKVSQMAVLTPLEHKIKAVVDENG-AILDSASDS 154
Query: 135 LELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK--Y 188
L IR++ + N E L+ +++ AQ + +IT R R + +K ++ Y
Sbjct: 155 LRQIRSQIRANEGRIREKLERMIRSSNAQKM----LSDAIITIRNDRYVIPVKQEYRGNY 210
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
GI + SSSG T F+EP+ V NN L E E IL+ LT E++ ++
Sbjct: 211 ---GGIIHDQSSSGQTLFIEPEVIVSLNNALRELKLKEGQEIEKILTELTVEVSVFSEDL 267
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
++ + +ID F +A + + + G P ++ + + + +HP+L
Sbjct: 268 LTIVSVLADIDFMFTKAKYGKSIKGTKPEINGNQVLKLNRA------RHPML-------- 313
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
P+ V N DI++ + +VITGPNTGGKT ++
Sbjct: 314 --------PIDEAVAN-------------------DIELGKDFSSIVITGPNTGGKTVTL 346
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KT+GL +LM+++GL +PA + + F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 347 KTIGLLTLMAQSGLQIPALDGSEMGVFQNVYADIGDEQSIEQSLSTFSSHMVNIVDILGK 406
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
V ESLVL DE+G+GTDP EG ALA SIL + R V TTHY +L N
Sbjct: 407 VDHESLVLFDELGAGTDPQEGAALAISILDEVHQRGAKVVATTHYPELKAYGYNRDGVVN 466
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETL PTY++L G G SNA I+K +G ++I RA+ + E +
Sbjct: 467 ASVEFDVETLSPTYKLLIGVPGRSNAFEISKRLGLADRVIDRAKSHIGTDSKEIEN---- 522
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
+ SL + R+ E+ A L + ++++++ + + + L K + Q +
Sbjct: 523 -MIASLEKSRKDAEADYDEAHELLKQAEMMHKDMQKQMMEFYEKRDSLYEKAEVKASQVV 581
Query: 609 NFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-AIVEAHRPDDDFSVSETNTSS 667
AK + + V++D + SA+ IKE E A +E P+ + S + +S
Sbjct: 582 EKAKEEAEGVIRDLRKMRLEKSAE-----IKEHELIDARKRIEGAAPELNRSKPKKTNAS 636
Query: 668 FTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
+ G++V V S K V +V ++ VQ G M+++VK+++++ I K+
Sbjct: 637 QKRELKPGDEVKVLSFDQKGHLVEKVSKNE--WQVQMGIMKMKVKESDLQFIQAEKK--- 691
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIA 781
P + +D G LDLRG R E A +D A
Sbjct: 692 VETKPLATVKGKDFHVGL-------------------ELDLRGERFENALSRVEKYVDDA 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 818
L R + +IHG GTG +++ V E L+NH V +
Sbjct: 733 LLAGYPR--VSIIHGKGTGALRQGVQEYLKNHRSVKR 767
>gi|399888238|ref|ZP_10774115.1| recombination and DNA strand exchange inhibitor protein
[Clostridium arbusti SL206]
Length = 788
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 218/709 (30%), Positives = 353/709 (49%), Gaps = 84/709 (11%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I DRAS +L IR + ++ S + + + + + + T R R + +KA +
Sbjct: 145 ISDRASTELFNIRKSLRDKTASVKSKVNSLVRSY--SNFLQENIYTIRGDRYVIPVKAEY 202
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K +P G+ + SSSGAT F+EP G V NN + E AE IL L+ +I ++
Sbjct: 203 KAQVP-GLVHDQSSSGATLFIEPMGLVNLNNEIKEIMLKEKAEINRILQELSQKIYENIV 261
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
++ V E+D FA+A +A ++ + P V+ + I+I +HPL+
Sbjct: 262 VVENNASIVYELDFIFAKAKYASEINAIRP------GVNDNGIIDIVQGRHPLI------ 309
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P K V +D+ + E +++TGPNTGGKT
Sbjct: 310 ---------DPEKV--------------------VAMDVYLGREFTSLIVTGPNTGGKTV 340
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL LM+ +G+ +PA+ + + +F + ADIGD QS+EQ+LSTFS H++ IV+I+
Sbjct: 341 TLKTVGLLELMAMSGILIPARENSTVSFFKEVFADIGDEQSIEQSLSTFSSHMTNIVNIM 400
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
SLVL DE+G+GTDP+EG ALA SIL+ LR+R V TTHY++L K
Sbjct: 401 GKADLTSLVLFDELGAGTDPTEGAALAVSILENLRERKTKLVATTHYSELKAYALKTEGV 460
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQ 544
ENA+ EF +ETLRPTYR+L G G SNA I+K +G II A+K + + L+ E
Sbjct: 461 ENASVEFDVETLRPTYRLLIGIPGKSNAFEISKRLGLPDYIIDEARKGISSDTLKFE--- 517
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD---RRAAHLKAKET 601
+L QSL E+ K E AR + L E + + E++ L+ +A KE
Sbjct: 518 ----DLIQSLQEKSIKAEENARKSEMLKIEAEKIKEKYEEKLYSLNSSREKALSEGRKEA 573
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ + E AK + D ++++ R + E + +++ + ++ + ++ + S
Sbjct: 574 KGIIAE---AKEEADEILKNIRELERMGYSSETRAKLEKERRRLKESLD-NVEENMYKDS 629
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
+ + GE+V++ SL K V+ P + V +Q G M++ VK N + K
Sbjct: 630 SKENGLTSVKEGEEVYIPSLNMK-GIVLSQPDNRGEVQIQAGIMKINVKLKN---LTKGK 685
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 781
N+ + + K++E + + ++ +S+DLRGM EEA + +D
Sbjct: 686 GDNSRSKEAKKIKKREAKLN---------------LKQVDSSIDLRGMDGEEAMYNVDKY 730
Query: 782 L--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
L A + VIHG GTGV++ + ++L+ V Y NYG
Sbjct: 731 LDEAYLAGLKSVTVIHGKGTGVLRNVISDMLKRQHHVKSYRL---GNYG 776
>gi|83815784|ref|YP_444790.1| MutS2 family protein [Salinibacter ruber DSM 13855]
gi|83757178|gb|ABC45291.1| MutS2 family protein [Salinibacter ruber DSM 13855]
Length = 819
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 243/809 (30%), Positives = 382/809 (47%), Gaps = 87/809 (10%)
Query: 41 LSTIEDIAGILNSAV-SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPL 99
LS + D+ L A + P ++ A RRTL + + KK EA D Y L
Sbjct: 68 LSPMYDLRDALRRAAPEDAYVDPEDLMATRRTLVTLRRL-KKHFEARRED------YPRL 120
Query: 100 LELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQ 159
+ + L +LEE I +D + I D AS +L +R + + E L + L K
Sbjct: 121 ADAVARATPLPDLEETIASILD-EDASIRDDASPELRRLRQQIRSKEEELRTTLDKALRH 179
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ G T R RM + ++AS K + +G + S+SG T ++EP +E NN
Sbjct: 180 AVREGHATGEQATLRGGRMVIPVRASAKGKV-EGFVHDRSASGQTVYIEPAACLELNNEV 238
Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
L ++E AE IL +T + I+ + + + DL A+A FA + V P L+
Sbjct: 239 RELQSAEQAEIERILRRVTDHVRAESDAIEENLTVLAQFDLLRAKARFANRLGAVVPKLN 298
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
+ HV EG ++P+L R + + T G S
Sbjct: 299 DEGHVEI-----YEG-RNPVLQLHFERR---------------DAGDATDGRASGEEEAL 337
Query: 340 P----VPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
P VP+D+++ + R +VITGPN GGKT +MKT+GL SLM GL LP H P F
Sbjct: 338 PPREVVPLDLELGADFRTLVITGPNAGGKTVTMKTVGLFSLMLAYGLPLPVAPHSSFPLF 397
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
D I+ADIGD QS+E +LSTFS H+S + +L V +LVLIDE G+GTDP EG ALA +
Sbjct: 398 DQIVADIGDEQSIEDDLSTFSSHVSNLRHMLSAVGENALVLIDEAGTGTDPDEGAALAQA 457
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
+L+ L + + TTH+ L + EN + EF ETLRPT+R G G S A
Sbjct: 458 VLEQLTEAGARTIATTHHGTLKTYAHEAEAVENGSMEFDQETLRPTHRYQEGVPGSSYAF 517
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQ------QHRKSELYQSLMEERRKLESQARTAA 569
IA+ +G ++ RA+ L + + + R EL L + R+ AR A
Sbjct: 518 EIARRMGLSGDLLDRARTLAGTQKTAMENLITTFERRTQELEDELYDARK-----AREKA 572
Query: 570 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 629
+ + E ++ +D R+ A +E +++ +E N A+++ +T+ + E Q
Sbjct: 573 EAEQQRYEEKTEKLEKERDAFRQQA---LEEAERIVEEAN-ARIE-NTIREIKEAQAESD 627
Query: 630 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP-----QFGEQVHVKSLGDK 684
+ E +++ ++ + A E P+ D + +E + +S G+QV V D
Sbjct: 628 ATQEAREQLEDYKADLQARREEAAPEQDAAPAEADGASPAAAGGPINEGDQVVV----DD 683
Query: 685 LATVVEVPG-DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
+T VEV +D + G M +RV + + + + +A P E+ G+
Sbjct: 684 GSTAVEVQEIEDGEARLLMGSMHMRVSLDRLTRVGGPE---SAEP-------DEEDTGGN 733
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGT 799
A + EAS S+D+RG RV+EA H LD A+A + + ++HG GT
Sbjct: 734 AEMAALEAS---------PSIDVRGERVDEARRQVQHFLDDAVAA--NLDTVEILHGKGT 782
Query: 800 GVVKERVLEILRNHPRVAKYEQESPMNYG 828
G ++ + E+L P V + +++P+ G
Sbjct: 783 GALRNALHEMLSGRPDVTDH-RKAPIEEG 810
>gi|423484112|ref|ZP_17460802.1| MutS2 protein [Bacillus cereus BAG6X1-2]
gi|401139138|gb|EJQ46701.1| MutS2 protein [Bacillus cereus BAG6X1-2]
Length = 786
Score = 260 bits (664), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 237/797 (29%), Positives = 379/797 (47%), Gaps = 111/797 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + E +G L L+
Sbjct: 65 LGGISDIRSNVKRAKIGSMLSPHELIEIASTMYGSRQMKRFIEDMVE-NGVEL---PILV 120
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKV 156
+ L +LE+KI CI + LD AS+ L IR + + R E L+S+ +
Sbjct: 121 GHVAQIISLYDLEKKITNCIGDGGEV-LDSASDKLRGIRNQIRTAESRIREKLESMTRSS 179
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE N
Sbjct: 180 NAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVELN 234
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N E E IL +LT E+A + ++ V +D FA+A +A+ + P
Sbjct: 235 NALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATKP 294
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
I++++ ++ + +HPL+ +P
Sbjct: 295 IVNNERYMDLKQA------RHPLI---------------DP------------------- 314
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 -EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFK 373
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA SI
Sbjct: 374 NIFADIGDEQSIEQNLSTFSSHMVNIVDILERADFESLVLFDELGAGTDPQEGAALAISI 433
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 434 LDEVYNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFE 493
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 494 ISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQS 547
Query: 577 D-LYREIEDEAKDL--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
+ L+RE++ + + DR LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 548 EKLHRELQRQIIEFNDDRDERLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLAN 604
Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDK 684
+ + LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQK 655
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 656 GQLLKKVS--DTEWNVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASV 700
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
+ S LDLRG R E+A +++ L A S + +IHG GTG +
Sbjct: 701 KGRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGAL 751
Query: 803 KERVLEILRNHPRVAKY 819
++ V + L+ H V Y
Sbjct: 752 RQGVQDYLKKHRGVKNY 768
>gi|418953440|ref|ZP_13505433.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-189]
gi|375375040|gb|EHS78649.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-189]
Length = 717
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 205/703 (29%), Positives = 355/703 (50%), Gaps = 87/703 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E + +S Y+ + +R +L+ + A +H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
++ Y++ ++ K L A ++ Q++ A + D +++D QLR+ +
Sbjct: 554 DLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLREQKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + R DD + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
+E+ D++ + VQ G +++++ PI + ++K + R
Sbjct: 657 LEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKKKLSQR 692
>gi|418873293|ref|ZP_13427600.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-125]
gi|375366347|gb|EHS70347.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-125]
Length = 717
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 205/703 (29%), Positives = 355/703 (50%), Gaps = 87/703 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E + +S Y+ + +R +L+ + A +H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
++ Y++ ++ K L A ++ Q++ A + D +++D QLR+ +
Sbjct: 554 DLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLREQKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + R DD + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
+E+ D++ + VQ G +++++ PI + ++K + R
Sbjct: 657 LEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKKKLSQR 692
>gi|418069516|ref|ZP_12706793.1| MutS family ATPase [Pediococcus acidilactici MA18/5M]
gi|357536047|gb|EHJ20078.1| MutS family ATPase [Pediococcus acidilactici MA18/5M]
Length = 785
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 234/800 (29%), Positives = 382/800 (47%), Gaps = 95/800 (11%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+EDI L L+ EI + R LRA V + D+ L ++
Sbjct: 68 LEDIDEPLQRLKIDATLNGREIAQIGRVLRATREVINFFADLP----DTEVTVETLNGVV 123
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
+ E+EE++ I+ + L+ AS +L IRA R + ++K + QA
Sbjct: 124 DQLETIPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQA 181
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ +P++T R R + ++A + G+ + SSSG T ++EP+ V+ NN +
Sbjct: 182 KYLSEPIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQ 240
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
+E+ EE IL L+A IA +K + +DL A+A +A + P
Sbjct: 241 VAEVHEEQRILQELSALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------Q 294
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
+S ++ IN+ +HPL+ +P K VP
Sbjct: 295 ISTNNRINLRQARHPLI---------------DPKKV--------------------VPN 319
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
DI++ E +VITGPNTGGKT ++KT+GL LM+++G+++PA + + F+ I ADIG
Sbjct: 320 DIRLGGEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGMFIPANENSTVRVFEEIFADIG 379
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQNLSTFS H+ + ILE ++ SL L DE+G+GTDP EG ALA +IL +R R
Sbjct: 380 DEQSIEQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQR 439
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
+++ TTHY +L + + NA+ EF ++TL+PTY++L G G SNA I++ +G
Sbjct: 440 GAVSITTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGL 499
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR--KLESQARTAASLHAEIMD-LYR 580
D II +A+ LV+ + Q + + ++R KL Q +T S E D L +
Sbjct: 500 DEDIITQARGLVD----QDSQDLNNMIKDLTTRQKRAQKLNEQVQTLLSQTEEYNDTLVK 555
Query: 581 EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE 640
+E ++ DR AKE+ Q +N ++ + D +++ + A + N LI E
Sbjct: 556 GVERLSQQRDRLLE--SAKES--ANQIVNDSRSEADQIIKRLRRLEKSAGNFKENDLI-E 610
Query: 641 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDT 697
++S + A+ + D + ++ + Q ++V V + G + + +V D
Sbjct: 611 AKSKLNALHQ----DTNLKRNKVLRKAKEAQKLHVNDEVIVLTYGQRGELLRQV--DAHH 664
Query: 698 VLVQYGKMRVRVKKNNIRPI-PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 756
VQ G ++++V + + + P K A++ K SAG
Sbjct: 665 WEVQMGILKMKVATDELEKVKPERTTKPASHNVVHRTK--------SAG----------- 705
Query: 757 VQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
K SLDLRG R EEA + D I A + +IHG GTG ++ + + L+ +
Sbjct: 706 ---VKTSLDLRGKRYEEALTETDRYIDAALLAGYDEVTIIHGKGTGALRSGITKYLKQNR 762
Query: 815 RVAKYEQESPMNYGCTVAYI 834
R+ +E +P N G A I
Sbjct: 763 RIKSFEY-APANAGGNGATI 781
>gi|259047143|ref|ZP_05737544.1| DNA mismatch repair protein MutS [Granulicatella adiacens ATCC
49175]
gi|259036193|gb|EEW37448.1| DNA mismatch repair protein MutS [Granulicatella adiacens ATCC
49175]
Length = 785
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 244/796 (30%), Positives = 380/796 (47%), Gaps = 119/796 (14%)
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLT-ELEEKI-- 116
L+ E+ + R L + V ++ E E + +L+R L+E L++ +T ELE I
Sbjct: 84 LNGRELSDILRVLTTTHEV-ERFFEKVEEEEIALKRVPRLVEKLESIPEVTKELEASIRE 142
Query: 117 -GFCIDCKLLIILDRASEDLELIRA-------ERKRNMENLDSLLKKVAAQIFQAGGIDK 168
G+ +LD AS +L IR E +R M D L AQ +
Sbjct: 143 DGY--------VLDSASPNLHGIRVGIQKTEQEIRRQM---DQYLTGKNAQY-----LSD 186
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
+IT R R + +KA +K + G + S +G T FMEP+ V NN E
Sbjct: 187 TIITIRNDRYVLPVKAEYKSVF-GGTVHDQSGTGQTLFMEPQAVVNLNNKLREYQVQEKR 245
Query: 229 EETAILSLLTAEI---AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E IL L+ ++ S + Y++ R +D+ A+A +A ++ PI+ Q+HV+
Sbjct: 246 EVERILWELSQKLMPYTNSLHQNHYVLAR---LDVVNAKALYANEINATEPIIDRQNHVA 302
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
+ HPLL D E K +S+ DI
Sbjct: 303 LWKAW------HPLL--------------------DRE----------KAVSN-----DI 321
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
+ E + +VITGPNTGGKT +KT+G+ LM++ GLY+PA + R+ F I ADIGD
Sbjct: 322 ILGEEYQAIVITGPNTGGKTILLKTVGVIQLMAQMGLYIPAGENSRVGIFTEIFADIGDE 381
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+EQNLSTFS H+S IV IL+ ++ +SL+LIDEIGSGTDP EG +LA +IL Y+ +
Sbjct: 382 QSIEQNLSTFSSHMSNIVSILKQINDKSLLLIDEIGSGTDPQEGSSLAIAILDYIASKQS 441
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ +THY +L + NA+ EF +TL+PTY++L G G SNA +I+K +G
Sbjct: 442 YVIASTHYPELKAYGYDRPKTINASMEFDGDTLQPTYQLLLGIPGRSNAFDISKRLGLPS 501
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA---RTAASLHAEIM-DLYRE 581
II +A+ L+ E Q + + L ++RR+ + A R L +++ DL +E
Sbjct: 502 IIIDQARGLL----SEEDQDLNA-MISDLEQKRRRAQRDADKMRHQLELSTQLLEDLQKE 556
Query: 582 IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKE 640
E + R K + ++Q +K D ++ + E QLR + E
Sbjct: 557 TEQFKANKARLLEEAKERANSLIEQ----SKDDADKILSEIRELQLRSKQTTVKEHEMIE 612
Query: 641 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
++A+ + + + + Q G+ V V S G + T+VE D++ V V
Sbjct: 613 KKTALTDLKHEQALKKNKVLRKVKAKK-ALQVGQSVEVLSFGQR-GTLVEKVSDEEWV-V 669
Query: 701 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 760
Q G +++++ ++ PI + QE +Q S+ R
Sbjct: 670 QMGIIKMKIAIEDLAPIAET---------------QEAKQQVIVKSA--------RSSHV 706
Query: 761 KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 818
+ LDLRG R EEA L++ L A + + +IHG GTG +++ V ++LR+H VA
Sbjct: 707 SSELDLRGKRYEEAMKDLELYLDAAILANYPRVTIIHGRGTGAIQQGVHKVLRSHRSVAS 766
Query: 819 YEQESPMNYGCTVAYI 834
+E +PMN G A I
Sbjct: 767 FEF-APMNTGGNGATI 781
>gi|423670115|ref|ZP_17645144.1| MutS2 protein [Bacillus cereus VDM034]
gi|401297475|gb|EJS03084.1| MutS2 protein [Bacillus cereus VDM034]
Length = 786
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 234/796 (29%), Positives = 378/796 (47%), Gaps = 109/796 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546
Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ L+RE++ + + + K ++ ++++ AK + D ++Q+ QLR A +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKQEADGIIQEL-RQLRKAQLINV 605
Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
+ LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------INVKNTAPKQQLRAGDEVKVLTFGQKG 656
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 804 ERVLEILRNHPRVAKY 819
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKTY 768
>gi|423598156|ref|ZP_17574156.1| MutS2 protein [Bacillus cereus VD078]
gi|401237617|gb|EJR44068.1| MutS2 protein [Bacillus cereus VD078]
Length = 786
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 234/796 (29%), Positives = 378/796 (47%), Gaps = 109/796 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A I ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIILSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 493 EISKRLGLSNRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546
Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKQEAEGIIQEL-RQLRKAQLINV 605
Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
+ LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKG 656
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 804 ERVLEILRNHPRVAKY 819
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKTY 768
>gi|257897919|ref|ZP_05677572.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
gi|257835831|gb|EEV60905.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
Length = 786
Score = 259 bits (663), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 218/729 (29%), Positives = 348/729 (47%), Gaps = 113/729 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPRISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL--- 596
++ Q L E LE++ + A + + E+ E ++ DL ++
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 597 -------KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 649
K+ +V E +I ++ + Q+ + E N LI A +
Sbjct: 564 REKEIEKAKKKANEVVSEAEEKAEKIIADIRKMQQQIGQGNVKE-NQLI----DAKTQLA 618
Query: 650 EAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
H+ + V + T + G++V V + G + T++ G+ V+ G +++
Sbjct: 619 NLHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKM 675
Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 767
V ++ + P+ AP Q+E Q +E +S+ P N LDLR
Sbjct: 676 NVSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLR 714
Query: 768 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 825
G R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P
Sbjct: 715 GKRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APA 773
Query: 826 NYGCTVAYI 834
N G A I
Sbjct: 774 NQGGNGATI 782
>gi|206901081|ref|YP_002251021.1| MutS2 protein [Dictyoglomus thermophilum H-6-12]
gi|206740184|gb|ACI19242.1| MutS2 protein [Dictyoglomus thermophilum H-6-12]
Length = 778
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 224/807 (27%), Positives = 395/807 (48%), Gaps = 112/807 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
S I+++ ++ A G ++ P E + RT+ +W KL + E +++ +P
Sbjct: 64 FSGIKNLEIYIDKAEKGGIVYPDEFEEIVRTI----EIWSKLRDYQE----KVRKIAP-- 113
Query: 101 ELLKNC-NFLTELEEKIGFCI-DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
L +N + L +L +I CI D + ++D AS +L+ IR +++R + + L+ +
Sbjct: 114 NLWRNTLHNLHDLYIQIRRCIQDGE---VVDSASPELKQIRQKKERLNQKIKETLENIIQ 170
Query: 159 QIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ +++ D+ +IT R R V I+ + + GI + S+SG T ++EP+ VE NN
Sbjct: 171 KEWRSYLQDQ-IITIRHGRYVVPIRQEFRGKI-QGIVHDQSTSGLTVYVEPQVIVELNNQ 228
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L + E E IL+ LT+ + + EI + E+D +A+ +A+ + PIL
Sbjct: 229 IALLESEEKREIERILTRLTSILLSYKEEILENLRTSFELDFVYAKIKWAEKHKAITPIL 288
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
+ + I + +HP L +
Sbjct: 289 EKEKPL-----IILREARHPFL------------------------------------GE 307
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VPI ++V +VITGPNTGGKT ++KT+GL L+++AG+ +PAK L F+ +
Sbjct: 308 KAVPISLEVGRTFNTLVITGPNTGGKTVTLKTIGLFVLLNQAGIPVPAKEGTVLGIFNQV 367
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRES----LVLIDEIGSGTDPSEGVALAT 454
ADIGD QS+EQNLSTFS H++ I+ ++ + R L+LIDE+G+GTDP EG ALA
Sbjct: 368 FADIGDEQSIEQNLSTFSSHMTNIISFIDYLERTGDKRVLILIDELGAGTDPQEGAALAV 427
Query: 455 SILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNA 514
++L+Y ++ + V+ TH+ L + K ENA+ EF +L+P Y+++ G G SNA
Sbjct: 428 ALLEYFHEKGTINVIATHFPQLKVIASKYPGMENASMEFDEISLKPLYKVVMGIPGKSNA 487
Query: 515 LNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE 574
+ I+K +G RKI+ R+ L+ + + E+ L +RR+ E + L +
Sbjct: 488 ILISKRLGLPRKILDRSLSLLSE-----DEIKLEEVIGELQRDRRRYEEEIEKINKLKRD 542
Query: 575 IMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ---LRDASA 631
+ + R+I++E + L++ A LKAK +++ ++++ + +I +++ + + ++DA +
Sbjct: 543 LQEEKRKIQEEKEMLEKEKAQLKAKYKEELFRDISKVEGKIREIIRKLQEESLTMKDAQS 602
Query: 632 --DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
+E+ +L KE I E P++ ++ P G++V ++S K V+
Sbjct: 603 LQEELRNLRKE-----LTIEEKREPEN---------LTYIPHIGDRVLLRS-TKKEGYVI 647
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
+V + T LVQ G +++ V A AP L+++ N+
Sbjct: 648 DVDNEKKTALVQVGLLKINVP--------------WAELAPSLKEEISVPSYVKVERVNQ 693
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 807
E PR + +R M V+E ++ L A + ++HG GTG ++ V
Sbjct: 694 EDV--PR------EISIRMMTVDEGLEEVKKYLEKAFLAGLKRVRIVHGKGTGKLRNAVH 745
Query: 808 EILRNHPRVAKYEQESPMNYGCTVAYI 834
E L P V +Y +P N G A I
Sbjct: 746 EYLSKVPYVKEYYL-APPNEGGEGATI 771
>gi|302802119|ref|XP_002982815.1| hypothetical protein SELMODRAFT_445339 [Selaginella moellendorffii]
gi|300149405|gb|EFJ16060.1| hypothetical protein SELMODRAFT_445339 [Selaginella moellendorffii]
Length = 691
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 255/505 (50%), Gaps = 33/505 (6%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+ D AS +L R E+ L L+ ++ I + G + R+CV + +
Sbjct: 182 VKDSASPELRTARMEQASCERKLQELMTRIV--IDRLAGDPNGQVASLDGRLCVAVSTEN 239
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+P G+ L S+ G ++EP AV NN + E +L LT ++
Sbjct: 240 NSKVP-GLLLQSSAGGLVSYVEPSAAVALNNSLSQARADAAQAEYRVLDDLTTKLRPFLS 298
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN-----IEGIKHPLLL 301
+ +D V + D+ AR ++ + P +S+++ +EG +HPLLL
Sbjct: 299 NFSFTLDIVADFDVVLARGRYSSSIGATRPSFVHAERDESESTLDEFLVLLEGARHPLLL 358
Query: 302 GSSLRSLSAASSNSNP-------LKSDVENSEMTVGSLSKGIS-----------DFPVPI 343
+L A + N +KS S + + I+ PVPI
Sbjct: 359 EQHRGNLRDAKAKLNTKRKILNRMKSRAFTSAQDYQAAEEAITKAEEEVAELEASVPVPI 418
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
D ++ ET+VV ITGPNTGGKTA++KTLGLA LM++AGLY+ AK +PW D +LADIG
Sbjct: 419 DFLIKRETKVVTITGPNTGGKTAAIKTLGLAVLMARAGLYVLAKEPALIPWVDRVLADIG 478
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QSL Q+LSTFSGH+ RI I E + SLVL+DE+G+GTD EG AL ++L+
Sbjct: 479 DQQSLSQSLSTFSGHLLRIKRIKEESTSSSLVLLDEVGTGTDFVEGAALGMAMLESFAAG 538
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
L + TTH+ +L LK D RFENA+ EF E L+PTYR+LWG G SNALNIA +G
Sbjct: 539 SLLTLATTHHGELKMLKYSDDRFENASVEFDEEKLKPTYRLLWGIPGRSNALNIAARLGL 598
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE 583
+II A+ L E +E+ +L + R+K E + L E YR +
Sbjct: 599 PEEIIMEARSLHGAANAEL-----NEVIMTLEQARQKFEHDLSKSQKLLGETRRHYRALS 653
Query: 584 DEAKDLD--RRAAHLKAKETQQVQQ 606
K+++ R+ A L A + V +
Sbjct: 654 IAQKEIEEYRKTAALDANDQLAVAE 678
>gi|191637667|ref|YP_001986833.1| DNA mismatch repair protein [Lactobacillus casei BL23]
gi|385819398|ref|YP_005855785.1| DNA mismatch repair protein, MutSB [Lactobacillus casei LC2W]
gi|385822563|ref|YP_005858905.1| DNA mismatch repair protein, MutSB [Lactobacillus casei BD-II]
gi|409996521|ref|YP_006750922.1| MutS2 protein [Lactobacillus casei W56]
gi|238693020|sp|B3WC74.1|MUTS2_LACCB RecName: Full=MutS2 protein
gi|190711969|emb|CAQ65975.1| DNA mismatch repair protein [Lactobacillus casei BL23]
gi|327381725|gb|AEA53201.1| DNA mismatch repair protein, MutSB [Lactobacillus casei LC2W]
gi|327384890|gb|AEA56364.1| DNA mismatch repair protein, MutSB [Lactobacillus casei BD-II]
gi|406357533|emb|CCK21803.1| MutS2 protein [Lactobacillus casei W56]
Length = 786
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 244/852 (28%), Positives = 399/852 (46%), Gaps = 115/852 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L +R E + S+ K+ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGKIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQVIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +P K VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
+ H + + L ++R+ E+ Q A S+H E+ Y++ E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
D + A KA ++ A+ + D +++ + QL + + N LI +A
Sbjct: 564 DAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613
Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
A+ + H+ P + G++V V S D+ T++E D VQ G
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
++++V + + I SK+ A P ++ SG S GP +L
Sbjct: 672 LKMKVPTDEMEKIKPSKQSAAQRPVVKV--------SGGGMS-------GP-----STTL 711
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRG R ++A LD I A + +IHG+GTG ++ V + L+ + +V Y
Sbjct: 712 DLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYG-F 770
Query: 823 SPMNYGCTVAYI 834
+P N G + A I
Sbjct: 771 APQNAGGSGATI 782
>gi|423557869|ref|ZP_17534171.1| MutS2 protein [Bacillus cereus MC67]
gi|401192406|gb|EJQ99422.1| MutS2 protein [Bacillus cereus MC67]
Length = 786
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 236/795 (29%), Positives = 380/795 (47%), Gaps = 107/795 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + AE +G L P+L
Sbjct: 65 LGGISDIRSNVKRAKIGSMLSPHELIEIASTMYGSRQMKRFIEDMAE-NGVEL----PIL 119
Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 EGHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546
Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ L+RE++ + + + K ++ ++++ AK + + ++ + QLR A +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNV 605
Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTS---SFTPQFGEQVHVKSLGDKLA 686
+ LI+ E A +V+ + V+ NT+ P G++V V + G K
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK------VNVKNTAPKQQLRP--GDEVKVLTFGQKGQ 657
Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGS 746
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 658 LLKKV--SDTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKG 702
Query: 747 SNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKE 804
+ S LDLRG R E+A +++ L A S + +IHG GTG +++
Sbjct: 703 RDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQ 753
Query: 805 RVLEILRNHPRVAKY 819
V + L+ H V Y
Sbjct: 754 GVQDYLKKHRGVKTY 768
>gi|431752400|ref|ZP_19541083.1| MutS2 protein [Enterococcus faecium E2620]
gi|430613891|gb|ELB50890.1| MutS2 protein [Enterococcus faecium E2620]
Length = 786
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 218/729 (29%), Positives = 348/729 (47%), Gaps = 113/729 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL--- 596
++ Q L E LE++ + A + + E+ E ++ DL ++
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 597 -------KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 649
K+ +V E +I ++ + Q+ + E N LI A +
Sbjct: 564 REKEIEKAKKKANEVVSEAEEKAEKIIADIRKMQQQIGQGNVKE-NQLI----DAKTQLA 618
Query: 650 EAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
H+ + V + T + G++V V + G + T++ G+ V+ G +++
Sbjct: 619 NLHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKM 675
Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 767
V ++ + P+ AP Q+E Q +E +S+ P N LDLR
Sbjct: 676 NVSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLR 714
Query: 768 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 825
G R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P
Sbjct: 715 GKRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APA 773
Query: 826 NYGCTVAYI 834
N G A I
Sbjct: 774 NQGGNGATI 782
>gi|300813660|ref|ZP_07093982.1| putative recombination and DNA strand exchange inhibitor protein
[Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300512202|gb|EFK39380.1| putative recombination and DNA strand exchange inhibitor protein
[Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 788
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 229/825 (27%), Positives = 394/825 (47%), Gaps = 86/825 (10%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+I EE K L +TS A++++ + +P L I + +L A G +L+PS +
Sbjct: 34 EIEISTDYEEINKRLKETSEAVSLIVKKGEP-PLFAIISLRDVLRRASLGGILNPSNLID 92
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ LR V+ + K + + D ++ + S + +L+ N LE+ I K +I
Sbjct: 93 ISNFLR-VSRLLKNYLKKDDKDENT-ENISIIKDLIDNLYINRNLEDSIN-----KKIIS 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKAS 185
D+ ++D +RN+ L L++ +I Q+ + +IT R R + ++
Sbjct: 146 EDQVADDASRKLLSIRRNIVKLQGSLREKLEKILQSQKDYLQDCIITMREGRYVIPVRNE 205
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
+K + G+ ++S SG T ++EP V NN L E E IL L+ E+A+
Sbjct: 206 NKSKVK-GLVHDISGSGQTVYIEPIEVVNANNEIKTLKIEEKEEVEKILKELSEEVAEVS 264
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
I+ + EID FA+ + M P V+ + I+++ HPLL
Sbjct: 265 TSIESNELILREIDFIFAKGKLSLDMGANLP------KVNKNRYIDLKNAYHPLL----- 313
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
N ++ V PI+I + + ++ITGPNTGGKT
Sbjct: 314 ------------------NRKIAV------------PINIYIGKDFTSLIITGPNTGGKT 343
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KTLG+ LM++ GL++PA ++ F+ + ADIGD QS+EQNLSTFS H++ IV+I
Sbjct: 344 VTLKTLGILQLMAQYGLHIPADEDSQVGIFNNLFADIGDEQSIEQNLSTFSSHMTNIVEI 403
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
LE V +SLVL DE+G+GTDP+EG ALA SI+ ++ +R + TTHY L
Sbjct: 404 LEKVDEDSLVLFDELGAGTDPTEGAALARSIMDFMLERKIRCISTTHYNQLKIYALTTEG 463
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
+NA+ EF + TL PTY++L G G SNA I+K +G +KII A+ L+ + E ++
Sbjct: 464 VKNASMEFDINTLSPTYKLLIGLPGKSNAFEISKRLGLSQKIINHARDLISQENIEFEK- 522
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
+ S+ ++R K A +++ +E+E K ++ + + + +
Sbjct: 523 ----VLASIEKDRTKTREFKELAKRHKSDLEKQNARLENELKKIENSKEKILKEAKDEAR 578
Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
+ L K +D ++ + + + S+D+ I+ES + + D F + +
Sbjct: 579 RILLSTKENVDLILDEISSLKAEISSDQARR-IQESGDLLRNSIRKVDNDKKFVIEKAKK 637
Query: 666 SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
+ G+QV S G+ ++TV+E+P + +Q G M+++V K ++ I
Sbjct: 638 PIEDIKVGDQVR-NSFGN-ISTVLELPDSKGNIYIQSGIMKMKVPKESLTKI-------- 687
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--A 783
+P + K + S + K+ +DLRG E++ +D L A
Sbjct: 688 -DPIDEVSKTKTRNIIKS------------KTMDVKSQIDLRGKNFEDSRDLVDKYLDDA 734
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+ +IHG GTGV+++++ E L+ V Y ++P N G
Sbjct: 735 FLAGLKTVNLIHGKGTGVLRKKLREYLKKQKNVKSY-SDAPYNEG 778
>gi|335356987|ref|ZP_08548857.1| DNA mismatch repair protein [Lactobacillus animalis KCTC 3501]
Length = 786
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 238/818 (29%), Positives = 391/818 (47%), Gaps = 151/818 (18%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L+ E+ + + LR+ N V + A D + L EL + L +L +++
Sbjct: 81 GATLNGKELAEISQVLRSANEVHRFFMALA----DEKVELNYLYELEEQLETLPQLAKRL 136
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----IT 172
++ + D +S L+R+ R++ ++ ++ A G K L +T
Sbjct: 137 QVSLEADGYVTDDASS----LLRSLRRQISTTEATIRNRLVA--LTRGNNAKYLSGANVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + ++A HK GI + SSSG TYF+EP+ VE NN RL ++AE+
Sbjct: 191 IRNDRYVIPVRAEHKGKF-GGIVHDQSSSGQTYFIEPREIVELNN---RLKQEQVAEKEE 246
Query: 233 ILSLL---TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL +L + E E+ + + E D A+A +A+ + P+LS Q
Sbjct: 247 ILRILRELSEETMPYTAELAHDAKILGEFDFINAKAKYAKELKATQPLLSEQK------D 300
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
I + + HPLL EM D V DI +
Sbjct: 301 IYLRQVWHPLL-------------------------EM----------DKAVKNDIILGK 325
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ + +VITGPNTGGKT ++KTLGL +M ++GL++PA + R+ F I ADIGD QS+E
Sbjct: 326 DYQAMVITGPNTGGKTITLKTLGLVQMMGQSGLFIPAFENSRIGVFKDIFADIGDEQSIE 385
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ IV+ILE V ++SLVL DE+G+GTDP EG ALA +IL + +
Sbjct: 386 QSLSTFSSHMTNIVNILEHVDQDSLVLFDELGAGTDPQEGAALAIAILDAIGASGAYVLA 445
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L + T+ NA+ EF+ ETLRPTYR+L G G SNA NI++ +G + I+
Sbjct: 446 TTHYPELKTYGFERTQTINASMEFNEETLRPTYRLLIGIPGQSNAFNISERLGLSQTIVA 505
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART-------AASLHAEIMDLYREI 582
A+ LV + + + L+ +RR+ E +A + A LH ++ Y
Sbjct: 506 AARNLV-----AKDSQDLNNMIADLVAKRRQAEEEAISLQANLDEAQKLHHDLATAYERF 560
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF------------ENQLRDAS 630
+E + + +A K K + V+Q AK + D ++ + EN+L DA
Sbjct: 561 VNEREQMQDQA---KQKANEIVEQ----AKQKADEIIGELRALKQNAATEIKENELIDAK 613
Query: 631 ADEINSLIKESESAI--------AAIVEAHRPDDDFSVSETNTSSFTPQFGEQ-VHVKSL 681
A ++N+L E + A+ A +A +P+DD V+ +G++ V V+ +
Sbjct: 614 A-QLNAL--EQKRALKKNKVLKRAKRKQAFKPNDDVMVTS---------YGQRGVLVQKV 661
Query: 682 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 741
G+ + VQ G +++++ + ++ + N P+ + +++
Sbjct: 662 GEHVWE------------VQLGILKIKIDEADLEKV---------NVEPK-----KVKRA 695
Query: 742 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGT 799
G+ S + P+ LDLRG R EEA ++D I A + ++HG GT
Sbjct: 696 GTVLRSASTSHVSPQ-------LDLRGKRYEEAMTEVDRYIDAAILAGYPSVTIVHGKGT 748
Query: 800 GVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 835
G +++ + + L+++ V + +P N G TV Y +
Sbjct: 749 GALRQGITQYLQSNRAVKSFNFAAPNNGGNGATVVYFR 786
>gi|293570971|ref|ZP_06682015.1| MutS2 family protein [Enterococcus faecium E980]
gi|430841856|ref|ZP_19459773.1| MutS2 protein [Enterococcus faecium E1007]
gi|431077718|ref|ZP_19495183.1| MutS2 protein [Enterococcus faecium E1604]
gi|431112285|ref|ZP_19497661.1| MutS2 protein [Enterococcus faecium E1613]
gi|431586437|ref|ZP_19520952.1| MutS2 protein [Enterococcus faecium E1861]
gi|431737011|ref|ZP_19525967.1| MutS2 protein [Enterococcus faecium E1972]
gi|291608955|gb|EFF38233.1| MutS2 family protein [Enterococcus faecium E980]
gi|430493674|gb|ELA69965.1| MutS2 protein [Enterococcus faecium E1007]
gi|430566133|gb|ELB05254.1| MutS2 protein [Enterococcus faecium E1604]
gi|430569239|gb|ELB08256.1| MutS2 protein [Enterococcus faecium E1613]
gi|430593615|gb|ELB31601.1| MutS2 protein [Enterococcus faecium E1861]
gi|430599387|gb|ELB37093.1| MutS2 protein [Enterococcus faecium E1972]
Length = 786
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 216/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEKKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|425059158|ref|ZP_18462510.1| MutS2 family protein [Enterococcus faecium 504]
gi|403036397|gb|EJY47747.1| MutS2 family protein [Enterococcus faecium 504]
Length = 786
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 216/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|228993275|ref|ZP_04153191.1| hypothetical protein bpmyx0001_40070 [Bacillus pseudomycoides DSM
12442]
gi|228766343|gb|EEM14986.1| hypothetical protein bpmyx0001_40070 [Bacillus pseudomycoides DSM
12442]
Length = 786
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 238/797 (29%), Positives = 378/797 (47%), Gaps = 111/797 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + K+ E +G L P+L
Sbjct: 65 LGGIFDIRPNVKRAKIGSMLSPHELLDIASTMYGSRQM-KRFIEDMVDNGVEL----PIL 119
Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETYVAQIVSLYDLEKKITSCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ + +D FARA +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMVLTEEVALEADTVLANVEVIANLDFIFARAFYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ + +N+ +HPL+ +P
Sbjct: 294 PIVNNERY------MNLRQARHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP DI + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNDIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVLDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVYNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
I+K +G ++I RA+ + + + E + E ++ E + E + + LH
Sbjct: 493 EISKRLGLSDRVIDRARNHIGTDTNKIENMIAKLEESQKNAEREWNEAEEHRKQSEKLHR 552
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 553 ELQRQIIEFNDE-----RDERLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLAN 604
Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLAT 687
+ + LI+ E A +V+ R V NT+ + G++V V + G K
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQR------VKVKNTAPKQQLRAGDEVKVLTFGQKGQL 658
Query: 688 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 747
+ +V D+ VQ G ++++VK++++ I N P E + +
Sbjct: 659 LKKV--SDNEWNVQIGILKMKVKESDMEYI------NTPQPV-------EKKAVATVKGR 703
Query: 748 NEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVV 802
+ S LDLRG R E A ++ D LA + S +IHG GTG +
Sbjct: 704 DYHVSL---------ELDLRGERFENAMMRVEKYLDDAQLANYPRVS---IIHGKGTGAL 751
Query: 803 KERVLEILRNHPRVAKY 819
++ V + L+ H V Y
Sbjct: 752 RQGVQDYLKKHRGVKNY 768
>gi|418643039|ref|ZP_13205225.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-24]
gi|418649444|ref|ZP_13211472.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-91]
gi|375016152|gb|EHS09796.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-24]
gi|375029817|gb|EHS23142.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-91]
Length = 717
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 201/681 (29%), Positives = 347/681 (50%), Gaps = 81/681 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI D ++ + HPLL N E V +
Sbjct: 295 PIFKE------DRTVYLPKAYHPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E + +S Y+ + +R +L+ + A +H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
++ Y++ ++ K L A ++ Q++ A + D +++D QLR+ +
Sbjct: 554 DLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLREQKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + R DD + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
+E+ D++ + VQ G +++++
Sbjct: 657 LEIVNDEEAI-VQMGIIKMKL 676
>gi|304385233|ref|ZP_07367578.1| DNA mismatch repair protein MutS [Pediococcus acidilactici DSM
20284]
gi|304328440|gb|EFL95661.1| DNA mismatch repair protein MutS [Pediococcus acidilactici DSM
20284]
Length = 786
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 234/800 (29%), Positives = 382/800 (47%), Gaps = 95/800 (11%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+EDI L L+ EI + R LRA V + D+ L ++
Sbjct: 69 LEDIDEPLQRLKIDATLNGREIAQIGRVLRATREVINFFADLP----DTEVTVETLNGVV 124
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
+ E+EE++ I+ + L+ AS +L IRA R + ++K + QA
Sbjct: 125 DQLETIPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQA 182
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ +P++T R R + ++A + G+ + SSSG T ++EP+ V+ NN +
Sbjct: 183 KYLSEPIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQ 241
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
+E+ EE IL L+A IA +K + +DL A+A +A + P
Sbjct: 242 VAEVHEEQRILQELSALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------Q 295
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
+S ++ IN+ +HPL+ +P K VP
Sbjct: 296 ISTNNRINLRQARHPLI---------------DPKKV--------------------VPN 320
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
DI++ E +VITGPNTGGKT ++KT+GL LM+++G+++PA + + F+ I ADIG
Sbjct: 321 DIRLGGEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGIFIPANENSTVRVFEEIFADIG 380
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQNLSTFS H+ + ILE ++ SL L DE+G+GTDP EG ALA +IL +R R
Sbjct: 381 DEQSIEQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQR 440
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
+++ TTHY +L + + NA+ EF ++TL+PTY++L G G SNA I++ +G
Sbjct: 441 GAVSITTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGL 500
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR--KLESQARTAASLHAEIMD-LYR 580
D II +A+ LV+ + Q + + ++R KL Q +T S E D L +
Sbjct: 501 DEDIITQARGLVD----QDSQDLNNMIKDLTTRQKRAQKLNEQVQTLLSQTEEYNDTLVK 556
Query: 581 EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE 640
+E ++ DR AKE+ Q +N ++ + D +++ + A + N LI E
Sbjct: 557 GVERLSQQRDRLLE--SAKES--ANQIVNDSRSEADQIIKRLRRLEKSAGNFKENDLI-E 611
Query: 641 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDT 697
++S + A+ + D + ++ + Q ++V V + G + + +V D
Sbjct: 612 AKSKLNALHQ----DTNLKRNKVLRKAKEAQKLHVNDEVIVLTYGQRGELLRQV--DAHH 665
Query: 698 VLVQYGKMRVRVKKNNIRPI-PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 756
VQ G ++++V + + + P K A++ K SAG
Sbjct: 666 WEVQMGILKMKVATDELEKVKPERTTKPASHNVVHRTK--------SAG----------- 706
Query: 757 VQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
K SLDLRG R EEA + D I A + +IHG GTG ++ + + L+ +
Sbjct: 707 ---VKTSLDLRGKRYEEALTETDRYIDAALLAGYDEVTIIHGKGTGALRSGITKYLKQNR 763
Query: 815 RVAKYEQESPMNYGCTVAYI 834
R+ +E +P N G A I
Sbjct: 764 RIKSFEY-APANAGGNGATI 782
>gi|347542281|ref|YP_004856917.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985316|dbj|BAK80991.1| DNA mismatch repair MutS-like protein [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 783
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 247/852 (28%), Positives = 399/852 (46%), Gaps = 132/852 (15%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQPL-DLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
PF ++EE + LN+TS A+ ++ L + ++D+ L G +S EI +
Sbjct: 36 PFS-TMEEVIRNLNETSEAVEFIKEFGLPNFVGLDDVYPYLEKIDKGGSVSIKEIYKIGT 94
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI-DCKLLIILD 129
TLR + V L+ + + L Y N + LE++I I D + I D
Sbjct: 95 TLRCIREVKDYLSNRSLI---YLNYY------YDNISTFKYLEDEIFKTIKDGEE--ISD 143
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHK 187
ASE+L IR E + + + +K+ ++I + + + + T R R C+ +KA +K
Sbjct: 144 FASENLFKIRKE----LRSKTAAIKRKLSEILKTYSKYLQENIFTVRGDRYCIPVKAEYK 199
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+ GI N SSSG+TYF+EP V NN L +E E IL L+ +I S
Sbjct: 200 SQIQ-GIVHNQSSSGSTYFIEPLVLVNLNNEVNELIENEKEEIQRILRLICMKIQDSIDS 258
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
I + V ++ F + +A +DG+ P +S + + S+ +HPL+ S+
Sbjct: 259 IYLSIKIVYFLEFIFGKGNYAIEIDGIKPDISDEEDIYLISA------RHPLIDRESV-- 310
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
VP+++ + + ++ITGPNTGGKT +
Sbjct: 311 ---------------------------------VPLNLNFMSDRKAIIITGPNTGGKTVT 337
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGL LM+ +GL++PA ++ + + I ADIGD QSLEQNLSTFS HI I++I
Sbjct: 338 LKTLGLMHLMAHSGLFIPAYEGSKIMFLNEIFADIGDEQSLEQNLSTFSSHIKNIINITN 397
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V ++L+L+DE+GSGTDP EG ALA SI+++ + + TTHY+ L E
Sbjct: 398 NVKDKTLILLDEVGSGTDPEEGAALAISIIEHFINSGCKLMGTTHYSQLKTYAINSEDIE 457
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ++TL+PTYR+ G G SNA IA S+G + II+ A+K
Sbjct: 458 NASVEFDVKTLKPTYRLNVGIPGKSNAFIIADSLGMNSSIIESAKKY------------- 504
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIE---DEAKDLD----RRAAHLKAKE 600
L + KLE+ +T E + REIE +E K L+ +R ++ ++
Sbjct: 505 ------LSGDTIKLENIIKTLEEKTTEAVKNNREIEILREENKILNEKLKKRIDGIENEK 558
Query: 601 TQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL----IKESESAIAAIVEAHRPDD 656
+ ++ A I ++ + L+ ++ E+N + IK+ ESA I + D+
Sbjct: 559 FRIIESAKEDAYKIITNAKREIDQALKMINSLEMNGIDLSSIKDLESARREI--KKKIDE 616
Query: 657 DFSVSE----TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
+ E N S +F G +K +G + T++ P VLVQ G +++ +
Sbjct: 617 QNKIKEEKSLKNNSEVNIEFKSGMSAFLKRIGQNV-TILGNPDSKGNVLVQAGILKLTIN 675
Query: 711 KNNIR-PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
+ + PI + + +L K +++ + R + S+DLRGM
Sbjct: 676 TSELESPIK--------DKSTKLAKSKKNLK--------------LRTSSMSTSIDLRGM 713
Query: 770 ----RVEEASHQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QES 823
+ E LD A + +IHG GTGV+K + +LRNH V + +
Sbjct: 714 DALNAISEVEKYLDDAFVSGLHE--VCIIHGKGTGVLKNSINNLLRNHVHVKSHRLGEYG 771
Query: 824 PMNYGCTVAYIK 835
G T+AY+K
Sbjct: 772 EGGDGVTIAYLK 783
>gi|297529147|ref|YP_003670422.1| MutS2 family protein [Geobacillus sp. C56-T3]
gi|297252399|gb|ADI25845.1| MutS2 family protein [Geobacillus sp. C56-T3]
Length = 792
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 250/832 (30%), Positives = 406/832 (48%), Gaps = 100/832 (12%)
Query: 17 LEESQKLLNQTSAALAMMQ---SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
LEE L++T A A+++ PLD + DI L A G LSP E+ V T
Sbjct: 48 LEEVAAWLDETDEAAAVLRLAGYAPLDGAV--DIRPHLKRAAIGGTLSPQELLEVAATSA 105
Query: 74 AVNNVWKKLTEAAELDG--DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
A + + + + E G D L Y+ EL++ + LE I ID + LD A
Sbjct: 106 ASRQMKRLIMDLHEEHGGLDRLSTYAD--ELVE----VPALEHDIRRSIDDHGEV-LDAA 158
Query: 132 SEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S+ L +R + + R E L+++++ +AQ + +IT R R + +K ++
Sbjct: 159 SDRLRSLRGQIRSVEARIREKLENIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYR 214
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+
Sbjct: 215 GAY-GGIVHDQSASGATLFIEPQAVVELNNALREARAKEKQEIERILRELSAKVAEQAEP 273
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ ++ + +D AFA+A +A+ + P ++S+ ++ F + +HPLL
Sbjct: 274 LARAVEALAALDFAFAKAKYARRLQAAKPAVNSRGYLRFLQA------RHPLL------- 320
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
D E + VP DI++ + +VITGPNTGGKT +
Sbjct: 321 -------------DQEKA---------------VPNDIELGGDYTTIVITGPNTGGKTVT 352
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 353 LKTIGLLTLMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILR 412
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V ESLVL DE+G+GTDP EG ALA +IL + R V TTHY++L
Sbjct: 413 HVDGESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYSELKAYGYNRPGVV 472
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA+ V + H
Sbjct: 473 NASVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERAKAQV-----SAESHNV 527
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
+ SL +++ E + A + E L E E + ++L+ A A+ TQ+
Sbjct: 528 ENMIASLERSKKQAEEEEARARAALEEAERLRAEWEQKWEELEEEKAERLAEATQKAADI 587
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
+ A+ + + ++Q+ ++ A+ + E++ +AA A + ++ S
Sbjct: 588 IRAAEREAERIIQELRRLQKEKQAEVKEHELVEAKQRLAA---AMPKVEKRKKAKKAASR 644
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
Q G++V V SL K + +V DD VQ G +++++++ ++ I ++ K+
Sbjct: 645 HVFQPGDEVKVTSLNQKGYLIEKV--SDDEWQVQLGILKMKIRERDLEYIGSASAKD-VT 701
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACW 785
P ++ + A S E LDLRG R E+A +L+ L A
Sbjct: 702 PIATVKGK-------DAHVSLE--------------LDLRGERYEDALIRLEKYLDDAVL 740
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
+ + +IHG GTG +++ V + L+ H V ++ + + G T+ +K
Sbjct: 741 AGYARVSIIHGKGTGALRQGVQQFLKQHRAVKSFRFGEANEGGTGVTIVELK 792
>gi|449095303|ref|YP_007427794.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis XF-1]
gi|449029218|gb|AGE64457.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis XF-1]
Length = 785
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 240/803 (29%), Positives = 389/803 (48%), Gaps = 100/803 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
DI G L A G +LSPSE + L AV + +T+ AE DG + PL+ + +
Sbjct: 70 DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124
Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
+ E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEHTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
I ++ +HPLL P V N
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ +
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + TTHY +L NA+ EF +ETL PTY++L G G SNA I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II +A+ + + + + SL + +++ E + S+ E L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551
Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 639
+E++ + +L+ + + + QQ +++ A + + ++ + + + + + + LI
Sbjct: 552 KELQQQIIELNSKKDKMLEEAEQQAAEKVKAAIKEAEDIIHELRSIKEEHKSFKDHELIN 611
Query: 640 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
++ + + A + F P G++V V + G K T++E G ++
Sbjct: 612 -AKKRLEGAMPAFEKSKKPEKPKAQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN- 666
Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 759
VQ G ++++VK+ ++ I ++ P P+ K A G
Sbjct: 667 VQIGILKMKVKEKDLEFIKSA-------PEPKKEKII-------------TAVKGKDYHV 706
Query: 760 SKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
S LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 707 SLE-LDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHR 762
Query: 815 RV--AKYEQESPMNYGCTVAYIK 835
V +++ + G TV +K
Sbjct: 763 SVKSSRFGEAGEGGSGVTVVELK 785
>gi|270290964|ref|ZP_06197187.1| MutS2 protein [Pediococcus acidilactici 7_4]
gi|270280360|gb|EFA26195.1| MutS2 protein [Pediococcus acidilactici 7_4]
Length = 785
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 234/800 (29%), Positives = 382/800 (47%), Gaps = 95/800 (11%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+EDI L L+ EI + R LRA V + D+ L ++
Sbjct: 68 LEDIDEPLQRLKIDATLNGREIAQIGRVLRATREVINFFADLP----DTEVTVETLNGVV 123
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQA 163
+ E+EE++ I+ + L+ AS +L IRA R + ++K + QA
Sbjct: 124 DQLETIPEIEERLNSSIEGNGHL-LNSASSELRRIRAAITRVEGEIRQRMEKFT-RGSQA 181
Query: 164 GGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLS 223
+ +P++T R R + ++A + G+ + SSSG T ++EP+ V+ NN +
Sbjct: 182 KYLSEPIVTIRSERYVIPVRADSRSRF-GGVVHDQSSSGQTLYVEPEAVVDLNNQLRQEQ 240
Query: 224 NSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSH 283
+E+ EE IL L+A IA +K + +DL A+A +A + P
Sbjct: 241 VAEVHEEQRILQELSALIAPYADTLKDNSKVLGHLDLLNAKAQYAHKLKATEP------Q 294
Query: 284 VSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPI 343
+S ++ IN+ +HPL+ +P K VP
Sbjct: 295 ISTNNRINLRQARHPLI---------------DPKKV--------------------VPN 319
Query: 344 DIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIG 403
DI++ E +VITGPNTGGKT ++KT+GL LM+++G+++PA + + F+ I ADIG
Sbjct: 320 DIRLGGEYSTLVITGPNTGGKTITLKTVGLLQLMAQSGIFIPANENSTVRVFEEIFADIG 379
Query: 404 DHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
D QS+EQNLSTFS H+ + ILE ++ SL L DE+G+GTDP EG ALA +IL +R R
Sbjct: 380 DEQSIEQNLSTFSSHMDNTIHILEHLNERSLALFDELGAGTDPKEGAALAIAILDRVRQR 439
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
+++ TTHY +L + + NA+ EF ++TL+PTY++L G G SNA I++ +G
Sbjct: 440 GAVSITTTHYPELKTYGYERSGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISRRLGL 499
Query: 524 DRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR--KLESQARTAASLHAEIMD-LYR 580
D II +A+ LV+ + Q + + ++R KL Q +T S E D L +
Sbjct: 500 DEDIITQARGLVD----QDSQDLNNMIKDLTTRQKRAQKLNEQVQTLLSQTEEYNDTLVK 555
Query: 581 EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKE 640
+E ++ DR AKE+ Q +N ++ + D +++ + A + N LI E
Sbjct: 556 GVERLSQQRDRLLE--SAKES--ANQIVNDSRSEADQIIKRLRRLEKSAGNFKENDLI-E 610
Query: 641 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVVEVPGDDDT 697
++S + A+ + D + ++ + Q ++V V + G + + +V D
Sbjct: 611 AKSKLNALHQ----DTNLKRNKVLRKAKEAQKLHVNDEVIVLTYGQRGELLRQV--DAHH 664
Query: 698 VLVQYGKMRVRVKKNNIRPI-PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 756
VQ G ++++V + + + P K A++ K SAG
Sbjct: 665 WEVQMGILKMKVATDELEKVKPERTTKPASHNVVHRTK--------SAG----------- 705
Query: 757 VQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
K SLDLRG R EEA + D I A + +IHG GTG ++ + + L+ +
Sbjct: 706 ---VKTSLDLRGKRYEEALTETDRYIDAALLAGYDEVTIIHGKGTGALRSGITKYLKQNR 762
Query: 815 RVAKYEQESPMNYGCTVAYI 834
R+ +E +P N G A I
Sbjct: 763 RIKSFEY-APANAGGNGATI 781
>gi|379020851|ref|YP_005297513.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
subsp. aureus M013]
gi|359830160|gb|AEV78138.1| Recombination inhibitory protein MutS2 [Staphylococcus aureus
subsp. aureus M013]
Length = 717
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 203/703 (28%), Positives = 352/703 (50%), Gaps = 87/703 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V + +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVANTIEF 325
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ D V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 326 MEDI------------ETVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E + +S Y+ + +R +L+ + A +H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDCLVKEAEQVHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
++ Y++ ++ K L A ++ Q++ A + D +++D QLR+ +
Sbjct: 554 DLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLREQKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + R DD + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPR 731
+E+ D++ + VQ G +++++ PI + ++K + R
Sbjct: 657 LEIVNDEEAI-VQMGIIKMKL------PIEDLEKKQKKKLSQR 692
>gi|417899642|ref|ZP_12543544.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21259]
gi|341844570|gb|EGS85782.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus 21259]
Length = 688
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 205/695 (29%), Positives = 352/695 (50%), Gaps = 84/695 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ ++ A G +L+ SE+ ++R ++ V N +K ++ D +Y L
Sbjct: 65 LSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQ-VQNQFKTFYNQL-VEEDEGVKYPILD 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + LT+L ++I C + D AS +L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNQLPVLTDLFQQINET--CDTYDLYDNASYELQGIRSKISSTNQRIRQNLDRIVKSQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 ANQ----KKLSDAIVTVRNERNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPSSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL + E E+ IL+ LT +A ++++ + ++V+ ++D A+A +++ + G
Sbjct: 236 NQISRLRHDEAIEKERILTQLTGYVA-ADKDALLVAEQVMGQLDFLIAKARYSRSIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI + V + HPLL N E V +
Sbjct: 295 PIFKEERTVYLPKAY------HPLL-----------------------NRETVVAN---- 321
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
I+ + ET V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 322 ------TIEFMEDIET--VIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSVF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ DIGD QS+EQ+LSTFS H++ IV+IL+ + SLVL DE+G+GTDPSEG ALA S
Sbjct: 374 KNVYCDIGDEQSIEQSLSTFSSHMTNIVEILKHADKHSLVLFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL ++R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDHVRKIGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS--ELYQSLMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E + +S Y+ + +R +L+ + A +H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQVHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
++ Y++ ++ K L A ++ Q++ A + D +++D QLR+ +
Sbjct: 554 DLSKQYQQFQNYEKSLIEEAK-------EKANQKIKAATKEADDIIKDLR-QLREQKGAD 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + R DD + + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
+E+ D++ + VQ G +++++ I + +KRK
Sbjct: 657 LEIVNDEEAI-VQMGIIKMKLP---IEDLEKNKRK 687
>gi|417988978|ref|ZP_12629502.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
A2-362]
gi|410540705|gb|EKQ15217.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
A2-362]
Length = 786
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 243/852 (28%), Positives = 399/852 (46%), Gaps = 115/852 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L +R E + S+ ++ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +P K VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEIGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPGVIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
+ H + + L ++R+ E+ Q A S+H E+ Y++ E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
D + A KA ++ A+ + D +++ + QL + + N LI +A
Sbjct: 564 DAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613
Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
A+ + H+ P + G++V V S D+ T++E D VQ G
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
++++V + + I SK+ A P ++ SG S GP +L
Sbjct: 672 LKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS-------GP-----STTL 711
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRG R ++A LD I A + +IHG+GTG ++ V + L+ + +V Y
Sbjct: 712 DLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYG-F 770
Query: 823 SPMNYGCTVAYI 834
+P N G + A I
Sbjct: 771 APQNAGGSGATI 782
>gi|423612727|ref|ZP_17588588.1| MutS2 protein [Bacillus cereus VD107]
gi|401244715|gb|EJR51074.1| MutS2 protein [Bacillus cereus VD107]
Length = 786
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 240/834 (28%), Positives = 394/834 (47%), Gaps = 113/834 (13%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
Q+ ++ + + + S PL I DI + A G +LSP+E+ + T+ + +
Sbjct: 47 QETTDEAAKVIRLKGSVPL--GGISDIRPNVKRAKIGSMLSPNELLDIANTMYGSRQMKR 104
Query: 81 KLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
+ + E +G L P+LE + L +LE+KI CI ++ D AS+ L IR
Sbjct: 105 FIDDMIE-NGVEL----PILETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIR 158
Query: 140 AERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
+ + R E L+++ + AQ + I +T R R + +K ++ + GI
Sbjct: 159 NQIRTAESRIREKLENMTRSSNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIV 213
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ S+SG T F+EP+ VE NN E E IL +LT E+A + ++ V
Sbjct: 214 HDQSASGQTLFIEPQVIVELNNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVV 273
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D FA+A +A+ + PI++++ ++ + +HPL+
Sbjct: 274 ANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQA------RHPLI--------------- 312
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P + VP +I + + +VITGPNTGGKT ++KT+G+
Sbjct: 313 DP--------------------EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICV 352
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM+++GL++P + + F I ADIGD QS+EQ+LSTFS H+ IVDILE ESLV
Sbjct: 353 LMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLV 412
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+G+GTDP EG ALA SIL + +R V TTHY +L + NA+ EF +
Sbjct: 413 LFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDV 472
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
TL PTY++L G G SNA I+K +G ++I RA+ + K E + +
Sbjct: 473 NTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKL 526
Query: 556 EERRKLESQARTAASLHAEIMD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ 614
EE +K + R A H + + L+RE++ + + + K ++ ++++ AK +
Sbjct: 527 EESQKNAERERKEAEEHRKQSEKLHRELQRQIVEFNEERDERLLKAQKEGEEKVEAAKKE 586
Query: 615 IDTVVQDFENQLRDASADEI--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFT 669
+ ++Q+ QLR A + + LI+ E A+ +V+ + N +
Sbjct: 587 AEGIIQEL-RQLRKAQLANVKDHELIEAKSRLEGAVPELVKKQK---------VNVKNTA 636
Query: 670 PQ----FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNA 725
P+ G++V V + G K + +V D VQ G ++++VK++N+ I
Sbjct: 637 PKQQLRAGDEVKVLTFGQKGQLLEKV--SDTEWNVQIGILKMKVKESNMEYINTP----- 689
Query: 726 ANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--A 783
KQ E + S + S LDLRG R E A +++ L A
Sbjct: 690 --------KQTEKKAVASVKGRDYHVSL---------ELDLRGERFENAMVRVEKYLDDA 732
Query: 784 CWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPMNYGCTVAYIK 835
S + +IHG GTG +++ V + L+ H V +Y G TV +K
Sbjct: 733 QLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKNFRYGDMGEGGLGVTVVELK 786
>gi|417982883|ref|ZP_12623531.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
21/1]
gi|417995567|ref|ZP_12635859.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
M36]
gi|417998549|ref|ZP_12638768.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
T71499]
gi|418001406|ref|ZP_12641551.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UCD174]
gi|418014595|ref|ZP_12654190.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lpc-37]
gi|410529338|gb|EKQ04156.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
21/1]
gi|410537240|gb|EKQ11818.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
M36]
gi|410540964|gb|EKQ15468.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
T71499]
gi|410546729|gb|EKQ20974.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UCD174]
gi|410553224|gb|EKQ27228.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
Lpc-37]
Length = 786
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 243/852 (28%), Positives = 400/852 (46%), Gaps = 115/852 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRRLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L +R E + S+ ++ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +P K VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
+ H + + L ++R+ E+ Q A S+H E+ Y++ E
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-- 562
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
R A +AK+ + ++ A+ + D +++ + QL + + N LI +A
Sbjct: 563 ---RDAQLQQAKD--KANTLVDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613
Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
A+ + H+ P + G++V V S D+ T++E D VQ G
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
++++V + + I SK+ A P ++ SG S GP +L
Sbjct: 672 LKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS-------GP-----STTL 711
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRG R ++A LD I A + +IHG+GTG ++ V + L+ + +V Y
Sbjct: 712 DLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYG-F 770
Query: 823 SPMNYGCTVAYI 834
+P N G + A I
Sbjct: 771 APQNAGGSGATI 782
>gi|398306013|ref|ZP_10509599.1| recombination and DNA strand exchange inhibitor protein [Bacillus
vallismortis DV1-F-3]
Length = 785
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 240/833 (28%), Positives = 402/833 (48%), Gaps = 99/833 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
S++E +K L++ A A+++ + + DI G L A G +LSP+E + L A
Sbjct: 39 SIDEIKKQLDEVDEASAIIRLRGQAPFGGLVDIRGALRRAEIGSVLSPAEFTEISGLLYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V + +++ AE DG + PL+ + + L++LE I CID + LD ASE
Sbjct: 99 VKQMKHFISQMAE-DGVDI----PLIHQHAEQLITLSDLERDINSCIDDHGEV-LDHASE 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 153 TLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSGAT F+EP+ V+ NN + E E IL +LT + A+ E+
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRMLTEQTAEHTEELF 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + +D FA+A +A+ + P+++ V + +HPLL
Sbjct: 268 QDLHVLQTLDFIFAKARYAKAVKATKPLMNDSGFVRLKKA------RHPLL--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P + V N DI++ + +VITGPNTGGKT ++K
Sbjct: 313 -------PAEQVVAN-------------------DIELGGDFSTMVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL +LM+++GL++PA F+ + ADIGD QS+EQ+LSTFS H+ IV ILE V
Sbjct: 347 TLGLLTLMAQSGLHIPADEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILEQV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA
Sbjct: 407 NENSLVLFDELGAGTDPQEGAALAMSILDDVHRTNARVLATTHYPELKAYGYNREGVMNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF +ETL PTY++L G G SNA I+K +G II +A+ + + +
Sbjct: 467 SVEFDIETLSPTYKLLIGVPGRSNAFEISKRLGLPDHIIGQAKSEM-----TAEHNEVDT 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL + +++ E + ++ E L++E++ + +L+ + + + QQ +++
Sbjct: 522 MIASLEQSKKRAEEELSETEAIRREADKLHKELQQQIIELNSKKDKMLEEAEQQAAEKVK 581
Query: 610 FAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFT 669
A + + ++ + + ++ + + + LI ++ + V +T +F
Sbjct: 582 AATKEAEDIIHELRSIKQEHRSFKDHELIN-AKKRLEGAVPTFEKSKKPEKPKTQKRNFK 640
Query: 670 PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPA 729
P G++V V + G K T++E G + VQ G ++++VK+ ++ I ++ P
Sbjct: 641 P--GDEVKVLTFGQK-GTLLEKTGGSEWN-VQIGILKMKVKEKDLEFIKSA-------PE 689
Query: 730 PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALAC 784
P+ K A G S LDLRG R E A ++ D LA
Sbjct: 690 PKKEKII-------------TAVKGKDYHVSLE-LDLRGERYENALSRVEKYLDDAVLAG 735
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
+ S +IHG GTG +++ V ++L+NH V +++ + G TV +K
Sbjct: 736 YPRVS---IIHGKGTGALRKGVQDLLKNHRSVKSSRFGEAGEGGSGVTVVELK 785
>gi|423368579|ref|ZP_17346011.1| MutS2 protein [Bacillus cereus VD142]
gi|401080105|gb|EJP88395.1| MutS2 protein [Bacillus cereus VD142]
Length = 786
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 233/796 (29%), Positives = 377/796 (47%), Gaps = 109/796 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546
Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKQEAEGIIQEL-RQLRKAQLINV 605
Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
+ LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFGQKG 656
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 804 ERVLEILRNHPRVAKY 819
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKTY 768
>gi|239629718|ref|ZP_04672749.1| MutS family ATPase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301065846|ref|YP_003787869.1| mutS family ATPase [Lactobacillus casei str. Zhang]
gi|417980047|ref|ZP_12620732.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
12A]
gi|418004482|ref|ZP_12644505.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UW1]
gi|239528404|gb|EEQ67405.1| MutS family ATPase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300438253|gb|ADK18019.1| MutS family ATPase [Lactobacillus casei str. Zhang]
gi|410525947|gb|EKQ00841.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
12A]
gi|410549791|gb|EKQ23945.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UW1]
Length = 786
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 243/852 (28%), Positives = 399/852 (46%), Gaps = 115/852 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L +R E + S+ ++ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +P K VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPGVIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
+ H + + L ++R+ E+ Q A S+H E+ Y++ E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
D + A KA ++ A+ + D +++ + QL + + N LI +A
Sbjct: 564 DAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613
Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
A+ + H+ P + G++V V S D+ T++E D VQ G
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
++++V + + I SK+ A P ++ SG S GP +L
Sbjct: 672 LKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS-------GP-----STTL 711
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRG R ++A LD I A + +IHG+GTG ++ V + L+ + +V Y
Sbjct: 712 DLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYG-F 770
Query: 823 SPMNYGCTVAYI 834
+P N G + A I
Sbjct: 771 APQNAGGSGATI 782
>gi|403253752|ref|ZP_10920053.1| DNA mismatch repair protein [Thermotoga sp. EMP]
gi|402811286|gb|EJX25774.1| DNA mismatch repair protein [Thermotoga sp. EMP]
Length = 757
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 236/800 (29%), Positives = 361/800 (45%), Gaps = 110/800 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
+ + DI+ + SG L P E+ V L + + KK E E YS L
Sbjct: 60 IKGLNDISQEVEKVKSGSPLEPWELLRVSVFLEGCD-ILKKEFEKRE--------YSRLK 110
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
E + E E++ CI+ I DRAS L IR E+KR L S +K+ A
Sbjct: 111 ETFSRLSSFREFVEEVNRCIEQDGEIS-DRASPRLREIRTEKKR----LSSEIKRKADDF 165
Query: 161 FQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ + + + R R +KAS K + GI ++SSSGAT F+EP VE NN
Sbjct: 166 VRTHSQILQEQMYVYRDGRYLFPVKASMKNAV-KGIVHHLSSSGATVFLEPDEFVELNNR 224
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L E E + IL LT + ++++ ++ + D +AR FA+ +G
Sbjct: 225 VRLLEEEERLEISRILRQLTNILLSRLKDLERNVELIARFDSLYARVKFAREFNGTV--- 281
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
V S I + +HPL+ +
Sbjct: 282 -----VKPSSRIRLVNARHPLIPKERV--------------------------------- 303
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VPI++++ R +ITGPN GGKT ++KT+GL + + +G LP L F I
Sbjct: 304 --VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPKI 361
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
+ADIG+ QS+EQ+LSTFS H+ +IV+I++ +SLV++DE+GSGTDP EG ALA +I++
Sbjct: 362 MADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAIAIIE 421
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
L ++ VTTH + NA+ EF ETL PTYR+L G G S+A IA
Sbjct: 422 DLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSHAFQIA 481
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
+ +G D++I++ A R R +++ L +SL E+ LE + R E M L
Sbjct: 482 EKLGLDKRIVENA-----RSRLSQEEMELEGLIRSLHEKISLLEEEKRKLQKEREEYMKL 536
Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
+ E++ K L R +E +++ + K ++D + + + S DE+ +
Sbjct: 537 REKYEEDYKKLRRMKIEEFDRELRELNDYIRKVKKELDQAI----HVAKTGSVDEMREAV 592
Query: 639 KESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
K +E + D + + E P G+ V ++ G + VVEV G DT
Sbjct: 593 K--------TIEKEKKDLERKRIEEAPEEEIKP--GDHVRMEG-GTSVGKVVEVKG--DT 639
Query: 698 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 757
LV +G +R++V P +LRK ++ SY P
Sbjct: 640 ALVDFGFLRLKV------------------PVSKLRKTKK-----EEKKETSTFSYKP-- 674
Query: 758 QTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
T + +D+RGM VEEA + I S ++IHG GTG + V EILR R
Sbjct: 675 STFRTEIDIRGMTVEEAEPVVKKFIDDLVMNGISKGYIIHGKGTGKLASGVWEILRKDKR 734
Query: 816 VAKYEQESPMNYGCTVAYIK 835
V + +P G V ++
Sbjct: 735 VVSFRFGTPSEGGTGVTVVE 754
>gi|163942283|ref|YP_001647167.1| recombination and DNA strand exchange inhibitor protein [Bacillus
weihenstephanensis KBAB4]
gi|229486366|sp|A9VJL2.1|MUTS2_BACWK RecName: Full=MutS2 protein
gi|163864480|gb|ABY45539.1| MutS2 family protein [Bacillus weihenstephanensis KBAB4]
Length = 786
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 233/796 (29%), Positives = 378/796 (47%), Gaps = 109/796 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRANIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546
Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKQEAEGIIQEL-RQLRKAQLINV 605
Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
+ LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFGQKG 656
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 804 ERVLEILRNHPRVAKY 819
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKTY 768
>gi|219848614|ref|YP_002463047.1| MutS2 family protein [Chloroflexus aggregans DSM 9485]
gi|219542873|gb|ACL24611.1| MutS2 family protein [Chloroflexus aggregans DSM 9485]
Length = 820
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 243/842 (28%), Positives = 386/842 (45%), Gaps = 121/842 (14%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
L E ++ T+ A +++ P L + D+ + A G +L + + + TLR+
Sbjct: 42 LNEVRRRQALTAEARLLLEEWPDLTIGGARDVRRSAHHAARGGMLDGTTLRDIAATLRSA 101
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASE 133
+ ++L+ LD R+ L +L L L + I I D + +LD AS
Sbjct: 102 ATLRQRLSR---LD----DRFPNLRDLGYTLPALPHLIDAIEQAIGDDGQ---VLDSASP 151
Query: 134 DLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
L +R E + L L+ + A + +P+IT R R + +KA H+ + G
Sbjct: 152 TLARLRHEVRVAFNRLQERLQSMIHSPTLAAALQEPIITVRNGRYVIPVKAIHRREV-RG 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
+ + S SGAT ++EP VE NN L ++E E IL L+ ++ ++ I ++
Sbjct: 211 LVHDQSGSGATLYIEPLAIVELNNRWRELQSAEAEEVQRILGALSEQVGEAVSAIVSTVN 270
Query: 254 RVLEIDLAFARAGFAQWMDGVCPIL---SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ +DL FA A +A P + S + + + +HPLL
Sbjct: 271 MLAALDLVFALARYAIATRSTAPEIVDWRPDDPPSTEPPLRLIRARHPLL---------- 320
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
D VPID+ + +++ITGPNTGGKT ++KT
Sbjct: 321 -------------------------PPDKVVPIDLWLGGTFSILLITGPNTGGKTVALKT 355
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
GL +LM++AG+ +PA RLP F I ADIGD QS+EQ+LSTFS H++ I+ +L+ ++
Sbjct: 356 TGLLALMAQAGMQIPADQPSRLPVFQYIFADIGDEQSIEQSLSTFSSHMANIIRVLQTLT 415
Query: 431 R-------------------ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
+LVL DE+G+GTDP EG ALA +I+ L + LAV TT
Sbjct: 416 EAQSFPAAPTDQALFDYRRPAALVLFDELGAGTDPVEGSALARAIIGRLLELGVLAVATT 475
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY +L ENA+ EF +ETL PTYR+ G G SNAL IA +G D +I++A
Sbjct: 476 HYPELKAFAYATPGVENASVEFDVETLAPTYRLSIGVPGHSNALAIAARLGLDPALIEQA 535
Query: 532 QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
+ + +R + + +L + ER A T A AE E+ +A+
Sbjct: 536 RSFI-----DRNEAQVEDLLAGIQRER-----AAATEALQRAE------ELRADAEKYRA 579
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL------IKESESAI 645
R A + + + L A+ +I+ +++ QLR +E S+ ++E+E +
Sbjct: 580 RLAAEQQAFAAEREVALAAARQEIEAELREVRQQLRRLR-EEYRSVSISRQWLEEAEKRL 638
Query: 646 AAIVEAHRPDDDFSVSETNTSSFTP------QFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
AA E + + + S+ P Q G+ VHV S+G ++ + DD+T
Sbjct: 639 AATAEQAQQATERLQRQMVPSAPPPPAERPLQVGDTVHVASVGLN-GEIMAIDTDDETAT 697
Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 759
VQ G R+ VK + + KR AA+ R + E P +
Sbjct: 698 VQVGGFRLTVKCSEL------KRAKAADNGER------------RFAPPERPVNLPSMPD 739
Query: 760 SKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA 817
+ D+RG RV E S +LD L A + +IHG GTG +++ V ++L +HP VA
Sbjct: 740 VSMTFDMRGWRVSEVSDRLDRYLNDAYLAGLHQVRLIHGKGTGALRQVVRDVLASHPLVA 799
Query: 818 KY 819
+
Sbjct: 800 SF 801
>gi|225026876|ref|ZP_03716068.1| hypothetical protein EUBHAL_01130 [Eubacterium hallii DSM 3353]
gi|224955800|gb|EEG37009.1| MutS2 family protein [Eubacterium hallii DSM 3353]
Length = 791
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 232/760 (30%), Positives = 347/760 (45%), Gaps = 125/760 (16%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D + Y L + L L ++I CI + I D AS L+ IR E K+ ++
Sbjct: 110 DDIMAYDSLNSYFGELDSLEFLYQRITQCILSEDEIS-DDASSALKDIRREIKQTNISIH 168
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
+ L V + LIT R R CV +K ++ P G+ + SSSG+T F+EP
Sbjct: 169 NKLTSVINSQNNKTMLQDALITVRNGRYCVPVKTEYRNAFP-GMIHDQSSSGSTLFIEPM 227
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V+ NN L E E IL L+A+ A RE++ + ++D FA+A +A+
Sbjct: 228 AVVQLNNHLKELDIKEKMEIEKILQSLSAQAASCSRELEENQKILTKLDFIFAKAKYAKE 287
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
G PI ++ D ++I+ +HPLL +P K
Sbjct: 288 YQGTEPIFNT------DGIVDIKQGRHPLL---------------DPKKV---------- 316
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VPI I + + ++++TGPNTGGKT S+KT+GL LM +AGL++PA
Sbjct: 317 ----------VPIHIYIGEDFNMLLLTGPNTGGKTVSLKTVGLFQLMGQAGLHIPAFQGS 366
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
RL F I ADIGD QS+E NLSTFS H++ +V IL+ SLVL+DE+ GTDP+EG
Sbjct: 367 RLAVFSDIFADIGDEQSIEMNLSTFSSHMTNLVHILDEADPNSLVLLDELCGGTDPTEGA 426
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA +IL L V TTHYA+L ENA EF LETL PTYR+L G G
Sbjct: 427 ALAIAILDDLHTGKIRTVATTHYAELKMYAMDTPGVENACCEFDLETLSPTYRLLIGIPG 486
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
SNA +I++ +G II++A R ++++ A +
Sbjct: 487 KSNAFSISERLGLPDYIIEQA--------------------------RSQIDATAIDFEN 520
Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
+ +E+ EIE E +L K Q+++ N K + D + + + LRDA
Sbjct: 521 MLSELEKNKAEIEKEQSEL--------YKTKQEIENLKNSLKEKQDDIKEKRDKMLRDAR 572
Query: 631 ADEINSLIKESESAIAAI-----------------VEAHRPD--------DD---FSVSE 662
+ N L + E A +I +EA R D D + +
Sbjct: 573 EEARNILEEAKEVADESIRKYHAWGQHPKQNNMKKMEAQRSDLRGRMSKLDKKLAYKAKK 632
Query: 663 TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
++T S F G+ V V +L TV E D +++Q G + V N+ +
Sbjct: 633 SSTISDPSDFKVGDSVFVTTLSLN-GTVKEAANKDGDLVIQMGFLSSVVNYKNLELL--- 688
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
A AP+ + Q +DR S N+ A+ P + N++D R+E+ LD
Sbjct: 689 ----APEKAPKPQHQPKDRY-----SINKAATINPEINLLGNTVDEAIARLEK---YLDD 736
Query: 781 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
A+ + + V+HG GTG +++ + E LR V Y+
Sbjct: 737 AMIA--GLTSVRVVHGKGTGALRKGIHEYLRKLKFVKSYK 774
>gi|423591474|ref|ZP_17567505.1| MutS2 protein [Bacillus cereus VD048]
gi|401232842|gb|EJR39340.1| MutS2 protein [Bacillus cereus VD048]
Length = 786
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 233/796 (29%), Positives = 378/796 (47%), Gaps = 109/796 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546
Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIQEL-RQLRKAQLINV 605
Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
+ LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKG 656
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 804 ERVLEILRNHPRVAKY 819
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKTY 768
>gi|311069349|ref|YP_003974272.1| recombination and DNA strand exchange inhibitor protein [Bacillus
atrophaeus 1942]
gi|419819994|ref|ZP_14343611.1| recombination and DNA strand exchange inhibitor protein [Bacillus
atrophaeus C89]
gi|310869866|gb|ADP33341.1| recombination and DNA strand exchange inhibitor protein [Bacillus
atrophaeus 1942]
gi|388475847|gb|EIM12553.1| recombination and DNA strand exchange inhibitor protein [Bacillus
atrophaeus C89]
Length = 785
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 238/836 (28%), Positives = 394/836 (47%), Gaps = 110/836 (13%)
Query: 15 KSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
K LEE +++ S+ + + P + DI L A G +LSP+E + L A
Sbjct: 45 KQLEE----VDEASSVIRLRGQAPF--GGVTDIRAALKRAEIGSVLSPAEFRDISGLLYA 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
V + L E DG + PLL + + L+ELE +I CID +LD ASE
Sbjct: 99 VKQMKNFLGSMYE-DGVEI----PLLNQYTEQLIGLSELEREINSCID-DYGEVLDHASE 152
Query: 134 DLELIRAERK----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR + + R + L+S+L+ +A + ++T R R + +K ++
Sbjct: 153 TLRGIRTQLRTLESRIRDRLESMLRSSSASKM----LSDTIVTIRNDRFVIPVKQEYRSS 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + SSSGAT F+EP+ V+ NN + E E IL LT A+ E+
Sbjct: 209 Y-GGIVHDTSSSGATLFIEPQAIVDMNNSLQQAKVKEKQEIERILRELTEHTAEHTHELF 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+ + +D FA+A +A+ P+++ + + + +HPLL
Sbjct: 268 QNLQVLQTLDFIFAKAKYAKASKATKPLINDRGFIRLKKA------RHPLL--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P + V N DI++ + +VITGPNTGGKT ++K
Sbjct: 313 -------PPEQVVAN-------------------DIELGGDFTTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
TLGL ++M+++GL++PA+ F+ + ADIGD QS+EQ+LSTFS H+ IV ILE V
Sbjct: 347 TLGLLTVMAQSGLHIPAEEGSEAAVFEHVFADIGDEQSIEQSLSTFSSHMVNIVGILERV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
+ SLVL DE+G+GTDP EG ALA SIL + + TTHY +L NA
Sbjct: 407 NENSLVLFDELGAGTDPQEGAALAMSILDEVHHTNARVIATTHYPELKAYGYNRNGVMNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF++ETL PTY++L G G SNA I++ +G II +A+ + + +
Sbjct: 467 SVEFNIETLSPTYKLLIGVPGRSNAFEISRRLGLPEHIIGQAKSEM-----TAEHNEVDT 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL +++ E++ S+ E L++E++ + +L+ + L + Q+ +++N
Sbjct: 522 MIASLEHSKKRAEAELSETESIRKEAETLHKELQQQIIELNSKKDKLLEEAEQKAIEKVN 581
Query: 610 FAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
A + + ++ + +++ + E+ + K E A+ A +
Sbjct: 582 AATKEAEDIIHELRLIKSEHKSFKDHELINAKKRLEDAVPAF----EKSKQPPKQKKEKR 637
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
P G++V V + G K T++E G + VQ G ++++VK+ ++ + +S
Sbjct: 638 ELKP--GDEVKVLTFGQK-GTLLEKTGSSEWN-VQIGILKMKVKEKDLEFMKSS------ 687
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIA 781
P P+ +E + G A LDLRG R E A ++ D
Sbjct: 688 -PEPK----KEKTIAAVKGKDYHVAL----------ELDLRGERYENALSRVEKYLDDAV 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
LA + S +IHG GTG +++ V +L+NH V +++ + G T+ +K
Sbjct: 733 LAGYPRVS---IIHGKGTGALRKGVQNLLKNHRSVKNSRFGEAGEGGSGITIVELK 785
>gi|331089007|ref|ZP_08337914.1| hypothetical protein HMPREF1025_01497 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330406459|gb|EGG85972.1| hypothetical protein HMPREF1025_01497 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 791
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 245/836 (29%), Positives = 385/836 (46%), Gaps = 140/836 (16%)
Query: 5 VVQKAQIPFGKS--LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSP 62
+++K +I FG + +EES K L +I G LN+A +LL
Sbjct: 57 IIKKGRISFGDAAPVEESLKRL---------------------EIGGALNTA---ELL-- 90
Query: 63 SEIC-AVRRTLRAV----NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
IC + T RA ++ + L + ++ D L+ +PL ++ C ++E E
Sbjct: 91 -RICRLLSNTARAKSYGRHDTQEDLADCLDIYFDGLEPLTPLSNEIERC-IISEDE---- 144
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKR 174
I D AS L+ IR R+M NL+ + + + + LIT R
Sbjct: 145 ---------ISDDASSALKHIR----RSMNNLNDRVHTTLSGLVNGSLRTYLQDALITMR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R C+ +KA ++ + G+ + S+SG+T F+EP V+ NN L E E IL
Sbjct: 192 GDRYCIPVKAEYRSQV-QGLIHDQSASGSTLFIEPMAIVKLNNDLKELYVQEQDEIRKIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E A+ EI+ + ++D FAR A M PIL+ + I I
Sbjct: 251 ASLSEEAAQYIEEIRTDYRSLTDLDFIFARGALALTMRASRPILNEEGR------IRIRE 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPLL + VPI + + E ++
Sbjct: 305 GRHPLLDQKKV-----------------------------------VPITVSLGDEFSLL 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
+ITGPNTGGKT S+KT+GL +LM +AGL++PA + + F + ADIGD QS+EQ+LST
Sbjct: 330 IITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAGDRSEIAVFRQVYADIGDEQSIEQSLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R + TTHY+
Sbjct: 390 FSSHMTNIVSFLKKVDDRSLVLFDELGAGTDPTEGAALAIAILSHLHKRNIRTMATTHYS 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L ENA EF +E LRPTYR+L G G SNA I+ +G II A+K
Sbjct: 450 ELKIYALSTPGVENACCEFDVENLRPTYRLLIGIPGKSNAFAISGKLGLPDYIIDDAKK- 508
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
R Q +L L RR +E + A+ E L R+ + + L+ +
Sbjct: 509 ----RLSEQDVSFEDLLSDLEASRRTIEKEQAEIAAYKKEAETLKRQAVQKQEKLEEQRD 564
Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESE--------SAI 645
+ + ++ L AK D +++F + + SA E+ KE E ++
Sbjct: 565 RIIREANEKANAILREAKEVADETIRNFHKFGKENISAAEME---KERERLRKKIKDTSA 621
Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
+A ++ ++P + S+ + GE V V S+ + T+ +P V VQ G +
Sbjct: 622 SASLKTNKPKKTYKPSDF-------KLGESVKVLSM-NLTGTIGSLPDARGNVTVQMGIL 673
Query: 706 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 765
R +V +++ I + + AP+ + +R + S ++ S P + +
Sbjct: 674 RSQVNISDLEII-----EEVSPYAPK----RMNRTAKSKIKMSKSLSVSPEI-------N 717
Query: 766 LRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
L G V+EA +LD L A + + V+HG GTG +++ + E LR V Y
Sbjct: 718 LLGKTVDEAVAELDKYLDDALLSHLNSVRVVHGKGTGALRKGIHEYLRRQKHVKSY 773
>gi|423660606|ref|ZP_17635775.1| MutS2 protein [Bacillus cereus VDM022]
gi|401302514|gb|EJS08093.1| MutS2 protein [Bacillus cereus VDM022]
Length = 786
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 233/796 (29%), Positives = 378/796 (47%), Gaps = 109/796 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546
Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKQEAEGIIQEL-RQLRKAQLINV 605
Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
+ LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKG 656
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 804 ERVLEILRNHPRVAKY 819
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKTY 768
>gi|417986118|ref|ZP_12626693.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
32G]
gi|410526874|gb|EKQ01752.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
32G]
Length = 786
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 243/852 (28%), Positives = 398/852 (46%), Gaps = 115/852 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L R E + S+ ++ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGFR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +P K VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPGAIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
+ H + + L ++R+ E+ Q A S+H E+ Y++ E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
D + A KA ++ A+ + D +++ + QL + + N LI +A
Sbjct: 564 DAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613
Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
A+ + H+ P + G++V V S D+ T++E D VQ G
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
++++V + + I SK+ A P ++ SG S GP +L
Sbjct: 672 LKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS-------GP-----STTL 711
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRG R ++A LD I A + +IHG+GTG ++ V + L+ + +V Y
Sbjct: 712 DLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYG-F 770
Query: 823 SPMNYGCTVAYI 834
+P N G + A I
Sbjct: 771 APQNAGGSGATI 782
>gi|187935216|ref|YP_001886652.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum B str. Eklund 17B]
gi|238691672|sp|B2TS45.1|MUTS2_CLOBB RecName: Full=MutS2 protein
gi|187723369|gb|ACD24590.1| MutS2 family protein [Clostridium botulinum B str. Eklund 17B]
Length = 785
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 227/831 (27%), Positives = 388/831 (46%), Gaps = 120/831 (14%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
+P+ + E + L A +M+ + + DI IL A G L+P ++ V
Sbjct: 35 VPYDNTYEINNSLEESNEALEILMKKGNPPIEGLCDIGDILQRAKKGGTLTPEQLLKVLG 94
Query: 71 TLRAVNNVWKKLT-EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
L A + + E E+ S + L +L N L + E+ D + D
Sbjct: 95 MLTATRRMQEFFKREEQEV---SFPKLEDLAYILAPINDLEKEIERSILSEDE----VSD 147
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHK 187
AS L IR R+++ +S +++ I ++ + L T R R + +KA +K
Sbjct: 148 NASTTLYNIR----RSLKEKNSSVREKINSIVRSNSKYLQDSLYTIRGDRYVIPVKAEYK 203
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P G+ + SS+GAT F+EP G V NN L E AE +LS L+ ++ +
Sbjct: 204 SSVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIDRVLSALSLKVKMNAEH 262
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + + +D F++ +A ++ + P+ V D NI +HPL+
Sbjct: 263 CESNLKILTNLDFIFSKGKYACELNAIKPM------VRDDGIFNIMSGRHPLIE------ 310
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
D VP+D+ + E ++ITGPNTGGKT +
Sbjct: 311 -----------------------------KDKVVPLDVVLGDEFDTLMITGPNTGGKTVT 341
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +M+ +GL +PA ++ + +F + ADIGD QS+EQ+LSTFS H++ IV+I+E
Sbjct: 342 LKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNIME 401
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+R+SL+L DE+G GTDP+EG ALA +I++ L + + TTHY++L R E
Sbjct: 402 YDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIATTHYSELKAYALNKDRVE 461
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF + TLRPTYR+L G G SNA I+K IG +++I A+ + + E +
Sbjct: 462 NASVEFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVIDCAKNYMSKENLEFEG--- 518
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKETQQVQ 605
L ++L E+ + AR A + E +L ++ E + + L+ + A+++A+E +
Sbjct: 519 --LIRNLQEKSIIAKKDARDAKVIKDEADNLKKKYEQKLERLEKVKDKAYMEAREEAK-- 574
Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE-----SAIAAIVEAHRP--DDDF 658
+V + +++ ADEI ++E E S +E R D
Sbjct: 575 -----------KIVANAKDE-----ADEILKAMRELEKLGIGSGGRQRLEEERKKLKDSL 618
Query: 659 SVSETNTSSFTPQFGEQVHVKSLG--------DKLATVVEVPGDDDTVLVQYGKMRVRVK 710
E N GE + +LG ++ V+ +P + V V+ G M++ VK
Sbjct: 619 EEKEKNLYKMKENDGEVLEKVALGMEAFLPSLNQTVVVISMPDNRGEVQVEAGIMKISVK 678
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
++R + + + E + +V+ N +DLRG+
Sbjct: 679 LKDLR-------------------KTKQSKVEKVKKKRELKLHFSKVE---NRIDLRGLD 716
Query: 771 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
EEA +++D L A + + ++HG GTG++++ + ++L+ H V Y
Sbjct: 717 AEEACYRVDKYLDDAYMGNLGEVTIVHGKGTGILRKAINDMLKRHVHVKNY 767
>gi|293378174|ref|ZP_06624343.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium PC4.1]
gi|292643038|gb|EFF61179.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium PC4.1]
Length = 786
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 350/727 (48%), Gaps = 109/727 (14%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ N E V P DI + + + +VITGP
Sbjct: 311 I-----------------------NQEKVV------------PNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ V+IL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVEILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL--------VQYGKMRVRV 709
ET + + ++ + GD++ +V G T+L V+ G +++ V
Sbjct: 620 LHQEETLKKNKVLKKAKEQKILKPGDEV--LVTTYGQRGTLLRKNGNQWQVEIGILKMNV 677
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 678 SEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRGK 716
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 827
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 717 RYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APANQ 775
Query: 828 GCTVAYI 834
G A I
Sbjct: 776 GGNGATI 782
>gi|160937675|ref|ZP_02085035.1| hypothetical protein CLOBOL_02565 [Clostridium bolteae ATCC
BAA-613]
gi|158439320|gb|EDP17072.1| hypothetical protein CLOBOL_02565 [Clostridium bolteae ATCC
BAA-613]
Length = 812
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 252/866 (29%), Positives = 396/866 (45%), Gaps = 106/866 (12%)
Query: 5 VVQKAQIPFGKSL----------EESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNS 53
+ + A P GK+L EE + QT+ A+ ++ + + S I DI L
Sbjct: 18 LTEYAASPLGKALCQNLSPSSDLEEVRTWQAQTTDAVTRIRLKGSVSFSGIRDIGDSLKR 77
Query: 54 AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELD----GDSLQRYSPLLELLKNCNFL 109
G LS E+ ++ L E D G+ + L L L
Sbjct: 78 LDIGSSLSIPELLSISSLLTVAARAKAYGRHDGEDDARGTGEPQDDFDSLEPLFAGLEPL 137
Query: 110 TELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQIFQAGG 165
T L +I CI + + D AS L +R K R L+S+L + + A
Sbjct: 138 TPLNNEIKRCILSEDEVA-DDASPGLSHVRRSMKVTADRIHTQLNSILNSNRSYLQDA-- 194
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+IT R R C+ +K+ +K + G+ + S++G+T F+EP + NN L
Sbjct: 195 ----VITMRDGRYCLPVKSEYKNQV-SGMVHDQSATGSTLFIEPMAIIRLNNEMRELEIQ 249
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E E A+L+ L+ + A E++ M+ + ++D FA+AG A+ P+ + + +
Sbjct: 250 EQKEIEAVLASLSNQAAPCTEELRMDMELLAQLDFIFAKAGLARHYKCSAPVFNDKGY-- 307
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
I+I+ +HPLL NP VPI++
Sbjct: 308 ----IHIKDGRHPLL---------------NP--------------------QAVVPINV 328
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
+ E ++++TGPNTGGKT S+KT+GL +LM ++GL++PA L FD + ADIGD
Sbjct: 329 WLGREFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLHIPAWEGSELAIFDQVFADIGDE 388
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QS+EQ+LSTFS H++ IV IL SL L DE+G+GTDP+EG ALA +IL +L +
Sbjct: 389 QSIEQSLSTFSAHMTNIVRILNEADSRSLCLFDELGAGTDPTEGAALAIAILSFLHNMKC 448
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ TTHY++L ENA EF++ETL+PTYR+L G G SNA I++ +G
Sbjct: 449 RTMATTHYSELKVFALSTPGVENACCEFNVETLQPTYRLLIGIPGKSNAFAISQKLGLPG 508
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
II A+ + E + +L SL R +E + + EI L + +
Sbjct: 509 YIIDDAKSHL-----EAKDESFEDLLTSLESSRLTIEKEQAEINAYKDEIASLKNRLTQK 563
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI 645
+ LD R + T++ Q+ L AK D ++ N+L +S + KE E+
Sbjct: 564 EERLDERKDKILKNATEEAQRILREAKETADQTIKQI-NKLAASSG-----VGKELEAER 617
Query: 646 AAIVEA-HRPDDDFSVSETNTSS-FTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
A + + + D+ +V S +P + G+ V V S+ K TV +P + V
Sbjct: 618 ARLRDQLKKTDEKLTVKPKGPSQPISPKKLKIGDGVKVLSMNLK-GTVSTLPNARGDLYV 676
Query: 701 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG--SSNEEASYGPRVQ 758
Q G +R V NIR + K+ + D S S G ++ + S +++
Sbjct: 677 QMGILRSLV---NIRDLELLNEKD-------ISATLGDGSSISYGGKAARGKGSGSSQIK 726
Query: 759 TSKNS-----LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 811
SK+S ++L GM V+EA ++ L A + V+HG GTG +K V + LR
Sbjct: 727 MSKSSTVSAEVNLIGMTVDEAVPAMEKYLDDAYLAHLQTVRVVHGRGTGALKNAVHKRLR 786
Query: 812 NHPRVAKYE--QESPMNYGCTVAYIK 835
V ++ Q + G TV K
Sbjct: 787 QLKYVKEFRLGQFGEGDSGVTVVTFK 812
>gi|428280333|ref|YP_005562068.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. natto BEST195]
gi|291485290|dbj|BAI86365.1| recombination and DNA strand exchange inhibitor protein [Bacillus
subtilis subsp. natto BEST195]
Length = 785
Score = 258 bits (660), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 238/803 (29%), Positives = 391/803 (48%), Gaps = 100/803 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL-ELLK 104
DI G L A G +LSPSE + L AV + +T+ AE DG + PL+ + +
Sbjct: 70 DIRGALRRAEIGSVLSPSEFTEISGLLYAVKQMKHFITQMAE-DGVDI----PLIHQHAE 124
Query: 105 NCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKKVAAQI 160
L++LE I CID + LD ASE L IR + + R + L+S+L+ +A
Sbjct: 125 QLITLSDLERDINSCIDDHGEV-LDHASETLRGIRTQLRTLESRVRDRLESMLRSSSASK 183
Query: 161 FQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEV 220
+ ++T R R + +K ++ GI + SSSGAT F+EP+ V+ NN
Sbjct: 184 M----LSDTIVTIRNDRFVIPVKQEYRSSY-GGIVHDTSSSGATLFIEPQAIVDMNNSLQ 238
Query: 221 RLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLE-IDLAFARAGFAQWMDGVCPILS 279
+ E E IL +LT + A+ E+ +L +VL+ +D FA+A +A+ + PI++
Sbjct: 239 QAKVKEKQEIERILRVLTEKTAEYTEEL-FLDLQVLQTLDFIFAKARYAKAVKATKPIMN 297
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
I ++ +HPLL P V N
Sbjct: 298 DTGF------IRLKKARHPLL----------------PPDQVVAN--------------- 320
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI++ + +VITGPNTGGKT ++KTLGL +LM+++GL++PA F+ +
Sbjct: 321 ----DIELGRDFSTIVITGPNTGGKTVTLKTLGLLTLMAQSGLHIPADEGSEAAVFEHVF 376
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H+ IV ILE V+ SLVL DE+G+GTDP EG ALA SIL
Sbjct: 377 ADIGDEQSIEQSLSTFSSHMVNIVGILEQVNENSLVLFDELGAGTDPQEGAALAMSILDD 436
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
+ + TTHY +L NA+ EF +ETL PTY++L G G SNA I+K
Sbjct: 437 VHRTNARVLATTHYPELKAYGYNREGVMNASVEFDIETLSPTYKLLIGVPGRSNAFEISK 496
Query: 520 SIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLY 579
+G II +A+ + + + + SL + +++ E + S+ E L+
Sbjct: 497 RLGLPDHIIGQAKSEM-----TAEHNEVDTMIASLEQSKKRAEEELSETESIRKEAEKLH 551
Query: 580 REIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIK 639
+E++ + +L+ + + + QQ +++ A + + ++ + + + + + LI
Sbjct: 552 KELQQQIIELNSKKDKMLEEAEQQAAEKVKAAMKEAEDIIHELRTIKEEHKSFKDHELIN 611
Query: 640 ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL 699
++ + + A + F P G++V V + G K T++E G ++
Sbjct: 612 -AKKRLEGAMPAFEKSKKPEKPKAQKRDFKP--GDEVKVLTFGQK-GTLLEKTGGNEWN- 666
Query: 700 VQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQT 759
VQ G ++++VK+ ++ I + AP +Q++++ + + S
Sbjct: 667 VQIGILKMKVKEKDLEFIKS---------AP---EQKKEKIITAVKGKDYHVSL------ 708
Query: 760 SKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
LDLRG R E A ++ D LA + S +IHG GTG +++ V ++L+NH
Sbjct: 709 ---ELDLRGERYENALSRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQDLLKNHR 762
Query: 815 RV--AKYEQESPMNYGCTVAYIK 835
V +++ + G TV +K
Sbjct: 763 SVKSSRFGEAGEGGSGVTVVELK 785
>gi|390956087|ref|YP_006419844.1| mismatch repair ATPase [Terriglobus roseus DSM 18391]
gi|390411005|gb|AFL86509.1| mismatch repair ATPase (MutS family) [Terriglobus roseus DSM 18391]
Length = 818
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 219/726 (30%), Positives = 345/726 (47%), Gaps = 97/726 (13%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+ D AS +L IR R + ++ L++ + AGG + LIT R R + +KA
Sbjct: 155 LADSASPELARIRKAMDRQHKAIEESLRRQLRAVSDAGGTQEDLITIRGERFVIPVKAEF 214
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ +P G+ SSSG T F+EP +EFNN VRL + E +E IL +T + +
Sbjct: 215 RRKVP-GVIHGSSSSGQTVFVEPMETIEFNNELVRLMDEEQSEIHRILISMTQAVGEQAG 273
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ + + E++ FA A FAQ +D V PI + D+++++E +HP+L
Sbjct: 274 SLSRGTEVLAEVEAHFAYAKFAQDLDCVRPIFTDGKPHGDDAALSLEAARHPML------ 327
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
L+ E +++ VP+ + + + ++I+GPNTGGKT
Sbjct: 328 ----------ELRMRSEKAKI-------------VPLTLGLPGVAKQLIISGPNTGGKTV 364
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL +LM++AGL +PAK RLP F + ADIGD QS+E+NLSTFS HIS + I
Sbjct: 365 ALKTVGLLALMAQAGLPVPAK-LARLPIFAAVYADIGDAQSIERNLSTFSAHISHVNQIA 423
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
SLVL+DE+GS TDP EG ALA +I + +++TTH L K
Sbjct: 424 READPRSLVLLDELGSATDPEEGAALAVAISERFLTMGAWSMITTHLTSLKIYAAKHDGV 483
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NAA F TL PTY + G G S+ +NIA+ +G D +I A+ V +
Sbjct: 484 VNAAVGFDERTLAPTYELRMGVPGASSGINIAERLGLDAGMISAARASV--------TTQ 535
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
+++ + L E +L + + A + A REI +DR L+++ + +Q
Sbjct: 536 SADIARFLDELHTQLTAVGKERAEIRA------REIA-----VDRERQRLESEGKVEQRQ 584
Query: 607 ELNFAKVQIDTVVQDFENQLRD---------------ASAD-EINSLIKESESAIAAIVE 650
+V++ +++++FE Q+R+ A AD I L +E + + +V
Sbjct: 585 RARELEVKLGSLMKEFEFQMRESVKGIEDKSAQRKASAEADRRIARLKREFQESFNQVVV 644
Query: 651 AHRPDDDFSVSETNTSSFTPQ------FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
AH S ++ + P G+ V +KS+G + VE D T V G
Sbjct: 645 AH-----VSGADKKDPAAQPHVVREVSVGDTVLLKSMGRE--AKVERVIDAKTFEVSIGP 697
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
M++RV K++I + PAP+ Q Q+ S N A V N +
Sbjct: 698 MKMRVPKDDIAKV--------TVPAPK----QSPIQAASKRGINVVAREPDMVPGEINVI 745
Query: 765 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
G +EA +++ L A R + V+HG G G+++ + E L+ HP V E
Sbjct: 746 ---GRTADEARDEVERFLDQAFLAGRGTIRVVHGTGMGILRRSLREYLKKHPHVIGV-TE 801
Query: 823 SPMNYG 828
P N G
Sbjct: 802 PPYNEG 807
>gi|154499931|ref|ZP_02037969.1| hypothetical protein BACCAP_03588 [Bacteroides capillosus ATCC
29799]
gi|150271529|gb|EDM98786.1| MutS2 family protein [Pseudoflavonifractor capillosus ATCC 29799]
Length = 791
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 239/816 (29%), Positives = 390/816 (47%), Gaps = 85/816 (10%)
Query: 18 EESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
++ Q+L +T+AA+ M ++ P LS ++ +A L A G L+ E+ + LRA
Sbjct: 44 DDVQRLQAETTAAVNMTALRGSPA-LSGVKPVAASLQRADMGGALNTRELLDIAAVLRAA 102
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ + A E +G + + L L FL E+KI I + I D AS +L
Sbjct: 103 RSA--RDYAAGENNGKTCIDH--LFASLTANRFL---EDKITGSILGENEIA-DSASPEL 154
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR + + +L+K+ + QA + +P+IT R R V +++ K +P G+
Sbjct: 155 ASIRRHIRATSAKVRDILQKLISS-SQAKYLQEPIITMRSDRYVVPVRSECKNDVP-GLV 212
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+VSSSG T+F+EP G V+ NN L E E IL+ L+A+ A + +I D +
Sbjct: 213 HDVSSSGGTFFIEPMGVVKANNELRELQADEEKEIDRILAELSADCAAHKEDIAQDYDLL 272
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ +D+ FARA + M P + S+ I + +HPLL
Sbjct: 273 IMLDVIFARAKLSYRMRASEPKIVSRG-------ICLRQARHPLL--------------- 310
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
+P K+ V D+ + + +VITGPNTGGKT ++KT+GL +
Sbjct: 311 DPNKA--------------------VANDLYLGGDFDTLVITGPNTGGKTVTLKTIGLLT 350
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM++ GL++P + + FD +L+DIGD QS+ Q+LSTFS H+ IV IL+ ++L+
Sbjct: 351 LMAQCGLHIPVADDSTVMIFDRVLSDIGDEQSIAQSLSTFSSHMVNIVGILKEADDKTLI 410
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+G+GTDP EG ALA +I++ R+ L TTHYA+L ENA+ EF +
Sbjct: 411 LFDELGAGTDPIEGAALAAAIIEQSRELGALVAATTHYAELKVYAMTTAGVENASCEFDV 470
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
+L PTYR+L G G SNA I++ +G +++I +A R + + R ++ L
Sbjct: 471 NSLAPTYRLLIGIPGKSNAFAISERLGLPKEVIDKASA-----RIDAENVRFEDVITRLE 525
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
++R+++E + A L E+ D R + L++ A K + + L+ A+
Sbjct: 526 QQRQQMEQEKDQARKLRREMEDSARTAREYRDKLEKERAKAVEKAQAEARAILDEARNTA 585
Query: 616 DTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
D+V ++ R +E + E + + + +A + Q G+
Sbjct: 586 DSVFKELNEMRRRQRKEEDWQKVNEERAGLRQRLNQAEDALGARPEEPAPPPTRPAQAGD 645
Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 734
V + +G A V+ V D ++ +Q G +++ K++ +R K A R+
Sbjct: 646 TVELVKMGGTKAQVLAV-NKDGSLQLQAGILKITAKQDEVRVTEEDGSKKQAQ---RIIH 701
Query: 735 QQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLF 792
+ E RQ + G+S+E +DLRGM +EA LD L A +
Sbjct: 702 RAE-RQLRTVGASSE--------------VDLRGMMTDEAVAALDSFLDNAMLAKLETVT 746
Query: 793 VIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+IHG GTG V++ V E L+ V + P YG
Sbjct: 747 IIHGKGTGAVRKAVREHLKRSRYVKSFR---PGRYG 779
>gi|366090394|ref|ZP_09456760.1| DNA mismatch repair protein [Lactobacillus acidipiscis KCTC 13900]
Length = 786
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 250/850 (29%), Positives = 394/850 (46%), Gaps = 104/850 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLL 60
MG + K +PF E L AA + + L I D+ L G L
Sbjct: 26 MGQKELTKL-LPFTTKAEIVLALSETKDAADILRLKDGIPLPKITDVKPFLKRLDIGASL 84
Query: 61 SPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
S E+ AV + LR + V + + D +L + L E + L ++ +++ I
Sbjct: 85 SAKELAAVGKVLRTTSEVRRFFVNLQD-DDVALDK---LYETAFDLETLPQVTKRLTLSI 140
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRS 176
+ + D +S L+++ R++ + S+ +A F G K L +T R+
Sbjct: 141 ENDGHVTDDASS----LLKSLRRQIITTEQSIRDTLAD--FTRGKSAKYLSEAVVTIRQD 194
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA---I 233
R + +KA ++ G + S+SG T F+EPK V NN RLS E A++ I
Sbjct: 195 RYVLPVKAEYRNSF-GGQVYDQSTSGQTLFIEPKQIVALNN---RLSQQEAAQKEEVRRI 250
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L L+ IA EI+ + +DLA A+A +A+ + P L+ D S+
Sbjct: 251 LRELSELIAPYTSEIEANAQLLGHLDLANAKAAYAKDLGASEPFLTD------DDSLYFR 304
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
HPLL +P K+ V+N DI + + +
Sbjct: 305 QAWHPLL---------------DPKKA-VKN-------------------DIMLGKDFKT 329
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
++ITGPNTGGKT ++KT+GL LM ++GL++PA R+ F I ADIGD QS+EQNLS
Sbjct: 330 MLITGPNTGGKTITLKTIGLIQLMGQSGLFIPANEGSRICIFAEIFADIGDEQSIEQNLS 389
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFS H++ IVD L+ +S SLVL DE+GSGTDP EG ALA +IL + + V TTHY
Sbjct: 390 TFSSHMTNIVDFLDQISPRSLVLFDELGSGTDPQEGAALAIAILDDVAAKGSYVVATTHY 449
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
+L + NA+ EF TL+PTY++L G G SNAL+I++ +G + II A +
Sbjct: 450 PELKVYGYERPETVNASVEFDSSTLKPTYKLLIGIPGRSNALDISRRLGLPQTIIDSATQ 509
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
LV + + + L+++R E + E L+ ++E L+ +
Sbjct: 510 LV-----SKDSQDLNNMIGDLVQKRHDAEEEKIQTHKYLVESEQLHSDLEKAYAALNDQR 564
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--SAIAAIVEA 651
L K Q+ + + D ++ D QLR +N +KE + +A + +
Sbjct: 565 DKLLEKAKQKANDTVAETTKKADQIIADLR-QLRLNGG--LN--VKEDKLINAKGQLNKL 619
Query: 652 HRPDD--DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
H+P++ V + + V VK+ G K ++ G+ D VQ G +++++
Sbjct: 620 HQPENLQKNKVLKRAKQKHDLHPNDDVLVKTYGQK-GVLLHKAGNHDWK-VQIGILKMKI 677
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
+N++ I S+ N N A R + S+G S SLDLRG
Sbjct: 678 NENDLEKISVSEENNQDNKASVKR-------TASSGIS--------------TSLDLRGQ 716
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM-- 825
R EEA +D L A S + +IHG GTG +++ +++ L+N V +E SP
Sbjct: 717 RYEEALTNVDRYLDSAQLAGYSSVTLIHGKGTGSLRQGIIKYLKNSRSVKSFEYASPNAG 776
Query: 826 NYGCTVAYIK 835
G T+ ++K
Sbjct: 777 GNGATIVHLK 786
>gi|167629882|ref|YP_001680381.1| muts2 family protein [Heliobacterium modesticaldum Ice1]
gi|167592622|gb|ABZ84370.1| muts2 family protein [Heliobacterium modesticaldum Ice1]
Length = 796
Score = 258 bits (659), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 240/834 (28%), Positives = 389/834 (46%), Gaps = 120/834 (14%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
P GK L + Q+ L++T+ A +++ +P + L+ DI L G +L +E+ V
Sbjct: 38 PKGK-LWQVQEGLSETTEAKEVLRLRPNVPLAAFHDIRPHLRKTAVGGILEAAELQQVAA 96
Query: 71 TLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
LR V L E GD + L L + E E +I CI + + D
Sbjct: 97 ALRISRQVRAFLL-GDEKKGDDKKSTPILTALAEGLGVYREAETEIDRCIVGEGEVADDA 155
Query: 131 ASEDLELIRAER---KRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
+ E L++ R + R E LD+L++ Q + + L+T R R V +++ ++
Sbjct: 156 SPELLKIRRTMKTIQNRVREKLDALIRNPDTQKY----LQDALVTVRGDRYVVPVRSEYR 211
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P G+ + S+SGAT F+EP VE NN R +E E IL L+ +AK +
Sbjct: 212 SQIP-GLIHDQSASGATVFIEPMAVVELNNELKRNQAAERTEIIRILRDLSLLVAKDAED 270
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
I ++ + +D FA+ + MD P +++Q + I +HPL+ G
Sbjct: 271 IGVSLEVLARLDFIFAKGKLSARMDAGEPAVNTQG------KLKIRQGRHPLIAGKV--- 321
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
VP+ I++ +VITGPNTGGKT +
Sbjct: 322 ---------------------------------VPVTIELGHAFDTLVITGPNTGGKTVT 348
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +LM+++GL++PA+ L F+ I DIGD QS+EQ+LSTFS H++ IV IL+
Sbjct: 349 LKTVGLLTLMAQSGLHVPAEADTELSLFEHIFVDIGDEQSIEQSLSTFSSHMTNIVGILQ 408
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
V SLVL+DE+G+GTDP+EG ALA +I+++L R + TTHY++L R E
Sbjct: 409 EVGPSSLVLLDELGAGTDPTEGAALAQAIMEHLLARGAKTIATTHYSELKAFAYSHDRVE 468
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV---ERLRPERQQ 544
NA+ EF +ETLRPTYR+L G G SNA I+ +G +++R++ L+ ER + +
Sbjct: 469 NASVEFDVETLRPTYRLLIGRPGRSNAFEISLRLGLREDVVKRSRSLLSQEERDVADLIE 528
Query: 545 HRKSE-------------LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR 591
H ++ L + E RRKLE + + A I++ RE EA + R
Sbjct: 529 HLEANQVTAEREREEAERLRREAEELRRKLEQREQAFREKEAAILEKARE---EAYAIVR 585
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ-LRDASADEINSLIKESESAIAAIVE 650
+A + + +++ +N A V+ + + E Q LR+ N L +E E
Sbjct: 586 KAREESDRIVRSLREIMNRAPVKEEMARAESERQRLREIQ----NKLGEERE-------- 633
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
H+ ++ + + G+ V V L K TV+ +P + +Q G +++ VK
Sbjct: 634 -HQEGGAGPLALKSV-----KVGQTVFVPRLNQK-GTVLTLPNPQGELQIQAGILKLNVK 686
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
++ K P++ G + A + + LD RG
Sbjct: 687 LAELQGTKEDK--------PKI------------GQTEYAAMARGKAREMSRELDFRGTT 726
Query: 771 VEEASHQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+EA + D LA +S + +IHG GTG ++ + L+ H V +
Sbjct: 727 ADEAIELVEKYLDDAYLAGLDS---VCLIHGKGTGALRAAIRSYLQKHRYVKSF 777
>gi|315641294|ref|ZP_07896371.1| DNA mismatch repair protein MutS [Enterococcus italicus DSM 15952]
gi|315483061|gb|EFU73580.1| DNA mismatch repair protein MutS [Enterococcus italicus DSM 15952]
Length = 797
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 242/817 (29%), Positives = 388/817 (47%), Gaps = 127/817 (15%)
Query: 44 IEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELL 103
+E+IA L G L+ E+ + R L + N V +E EL+ D + L + +
Sbjct: 78 LENIAPHLKRIEIGADLNGLEVAQIARVLSSTNQVSAFFSELQELEID----FHRLYDWV 133
Query: 104 KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQ 159
+ L EL +++ +D + D AS +L+ IR +R +N LD L++ A+
Sbjct: 134 EQLVVLPELTKQMTRAVDEDGRVT-DEASPELKGIRQAIRRMEQNIREALDQLVRGSHAK 192
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ L+T R R + +K ++ + G+ + S+SG T F+EPK VE NN
Sbjct: 193 Y-----LSDALVTMRNDRYVLPVKQEYRGIF-GGVVHDQSASGQTLFIEPKQIVELNN-- 244
Query: 220 VRLSNSEIAEETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
RL +IAE+ ILS L+A + REI + + + D+ A+A + + M + P
Sbjct: 245 -RLRQQQIAEKNEVARILSELSALLVPHRREIAHNSYVLGQFDVMNAKARYGKLMKAIVP 303
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+S D + + +HPL+ + E+ V +
Sbjct: 304 TMS------IDREVQLLKARHPLI-----------------------DQEVVVAN----- 329
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
DI + + + +VITGPNTGGKT ++KTLGL LM++AGL +P + ++ F
Sbjct: 330 -------DIMIGKDYQAIVITGPNTGGKTITLKTLGLLQLMAQAGLPIPVEEGSQIGVFA 382
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQNLSTFS H++ IV IL+ + +SLVL DE+G+GTDP EG ALA +I
Sbjct: 383 EIFADIGDEQSIEQNLSTFSSHMTNIVSILDKIDEKSLVLFDELGAGTDPQEGAALAIAI 442
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L + + + TTHY +L + NA+ EF ++TL PTYR+L G G SNA
Sbjct: 443 LDAVGAKSSYVMATTHYPELKIYGYNRAKTINASMEFDVDTLSPTYRLLIGVPGRSNAFE 502
Query: 517 IAKSIGFDRKIIQRAQKL-------VERLRPERQQHRKS------ELYQSLMEERRKLES 563
I+K +G D II+ A+++ + + + + RK EL Q L +E KL+
Sbjct: 503 ISKRLGLDTTIIEEAKQIMSGESQDINEMIADLENQRKMTETEYLELRQQL-QESEKLQK 561
Query: 564 QARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFE 623
+ A L Y+E +DE ++A L +E Q+ + D ++++
Sbjct: 562 ELTKATEL------FYQERDDELAKARKKANEL-VEEAQE----------KSDRIIKE-- 602
Query: 624 NQLRDASADEINSLIKESE--SAIAAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVK 679
LR + + IKE +A + H+ D V + ++ + + G++V V
Sbjct: 603 --LRQMQLEGQATPIKEHRLIAAKTKMASLHQEDALKKNKVLKKAKAAKSLKIGDEVRVI 660
Query: 680 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 739
S G + + +V + VQ G +++ + +I I AA P R R
Sbjct: 661 SYGQRGELIKKV--GNHQWQVQMGILKMTIDDTDIEAI-------AAPKQPTQRTVHTVR 711
Query: 740 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGM 797
S A P+ LDLRG R EEA ++D L A + + ++HG
Sbjct: 712 -------SQRAAHVSPQ-------LDLRGKRYEEALAEVDQYLDAAILANYPQVTIVHGK 757
Query: 798 GTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
GTG +++ ++ L+NH R K+ + +P N G A I
Sbjct: 758 GTGTLRQGIVNYLKNH-RSVKHFEFAPANQGGNGATI 793
>gi|339629769|ref|YP_004721412.1| MutS2 family protein [Sulfobacillus acidophilus TPY]
gi|379007116|ref|YP_005256567.1| MutS2 protein [Sulfobacillus acidophilus DSM 10332]
gi|339287558|gb|AEJ41669.1| MutS2 family protein [Sulfobacillus acidophilus TPY]
gi|361053378|gb|AEW04895.1| MutS2 protein [Sulfobacillus acidophilus DSM 10332]
Length = 773
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 224/798 (28%), Positives = 364/798 (45%), Gaps = 116/798 (14%)
Query: 54 AVSGQLLSPSEICAVRRTLRAVNNVWKKLTE---AAELDGDSLQRYSPLLELLKNCNFLT 110
A G +L+ E+ A+++T+R ++W L + A L L P LL + + +
Sbjct: 76 AARGGVLTIPELTAIQKTIRVYQSIWTALDQRSGYARLSAAILP-IEPPRALLAHLDRVL 134
Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN-LDSLLKKVAAQIFQAGGIDKP 169
+ E ++ D AS L IR R R++E + L ++ A + +P
Sbjct: 135 DAEGRVQ-----------DHASPALAHIRG-RMRDLEREILQLFDRILHAPDWAPYLQEP 182
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
L+T R R + ++ ++ +P G+ + SSSG T ++EP A+E N L E E
Sbjct: 183 LVTVRFGRRVIPVRHEYRNQVP-GVVQDFSSSGQTVYVEPLAALERQNRLSGLMQEEAEE 241
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL+ L+ E+A E+ + R+ D A + V P +
Sbjct: 242 IERILAELSREVAGVANELSAIQTRIGWFDELVGIARYGLKTQSVIPQIGG-------DR 294
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
+++ G HPLL PVPI + +
Sbjct: 295 LHLIGACHPLLTQ-------------------------------------PVPIQVDLTR 317
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ V++I+GPNTGGKT ++KT+GL ++M GL +PA +PWF I AD+GD QSLE
Sbjct: 318 DRPVLIISGPNTGGKTVALKTVGLIAVMGLTGLMVPAHEDSTIPWFRAIWADVGDQQSLE 377
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
NLSTFSGH++R+ ++E ++L LIDEIG+GTDP EG ALA +++++L +V+
Sbjct: 378 HNLSTFSGHLARLAPMMEDAGEDTLCLIDEIGAGTDPEEGAALAEAMIRHLAQSRAYSVI 437
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
+TH+ L L KD R +NA EF ETL PTYR++ G G S A IA+ +GF ++
Sbjct: 438 STHFNRLKLLAYKDDRIQNARVEFDPETLAPTYRLILGEPGSSYAFYIARRLGFPPALLD 497
Query: 530 RAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
A+ L+ E + R ++L+ + EE E++ R +L AE + +
Sbjct: 498 AAEALLPDEAVALTRALEEVNQLHHRVAEE----EARLRAERALLAEAQAAFEQ------ 547
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
+A L+ E + + E + + Q+D + + F + +++ E + ++ E+
Sbjct: 548 ---EQARWLEKWERDRSRAEATW-RQQLDQLTRRFNDLMQEYRQSEAENRVRALEAIRQE 603
Query: 648 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
+ A + + T + G+ V V D + VVE+ G +T VQ G +R+
Sbjct: 604 LRTAGQIPAPIRRARRTTPAAPLAVGQSVRVTGFAD-VGQVVEMNG--NTATVQIGALRM 660
Query: 708 RVKKNNIRP------IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
++ + + P P R+ AA L +Q + + +
Sbjct: 661 KLAVSELEPAGDTALTPTRSRRTAA-----LVRQ--------------------KAEQAV 695
Query: 762 NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+DLRGM EA LD L A + +IHG GTGV++ V L+ PRV Y
Sbjct: 696 IEVDLRGMTQAEALETLDKFLDDAVLSGAPFVRIIHGKGTGVLRRAVQHALKADPRVESY 755
Query: 820 E--QESPMNYGCTVAYIK 835
+ G TVA +K
Sbjct: 756 RLGEAGEGGDGVTVATLK 773
>gi|188590038|ref|YP_001921612.1| recombination and DNA strand exchange inhibitor protein
[Clostridium botulinum E3 str. Alaska E43]
gi|238689679|sp|B2V583.1|MUTS2_CLOBA RecName: Full=MutS2 protein
gi|188500319|gb|ACD53455.1| MutS2 family protein [Clostridium botulinum E3 str. Alaska E43]
Length = 785
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 227/831 (27%), Positives = 387/831 (46%), Gaps = 120/831 (14%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
+P+ + E + +L A +M+ + + DI IL A G L+P ++ V
Sbjct: 35 VPYDNTYEINNRLEESNEALEILMKKGNPPIEGLCDIGDILQRAKKGGTLTPEQLLKVLG 94
Query: 71 TLRAVNNVWKKLT-EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
L A + + E E+ S + L +L N L + E+ D + D
Sbjct: 95 MLTATRRMQEFFKREDQEV---SFPKLEDLAYILAPINDLEKEIERSILSEDE----VSD 147
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHK 187
AS L IR R+++ +S +++ I ++ + L T R R + +KA +K
Sbjct: 148 NASTTLYNIR----RSLKEKNSSVREKINSIVRSNSKYLQDSLYTIRGDRYVIPVKAEYK 203
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P G+ + SS+GAT F+EP G V NN L E AE +LS L+ ++ +
Sbjct: 204 SSVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIDRVLSALSLKVKMNAEH 262
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + +D F++ +A ++ + P+ V D NI +HPL+
Sbjct: 263 CESNFKILTNLDFIFSKGKYACELNAIKPM------VRDDGIFNIMSGRHPLIE------ 310
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
D VP+D+ + E ++ITGPNTGGKT +
Sbjct: 311 -----------------------------KDKVVPLDVVLGDEFDTLMITGPNTGGKTVT 341
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +M+ +GL +PA ++ + +F + ADIGD QS+EQ+LSTFS H++ IV+I+E
Sbjct: 342 LKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNIME 401
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+R+SL+L DE+G GTDP+EG ALA +I++ L + + TTHY++L R E
Sbjct: 402 YDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIATTHYSELKAYALNKERVE 461
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF + TLRPTYR+L G G SNA I+K IG +++I A+ + + E +
Sbjct: 462 NASVEFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVIDCAKNYMSKENLEFEG--- 518
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKETQQVQ 605
L ++L E+ + AR A + E +L ++ E + + L+ + A++ A+E +
Sbjct: 519 --LIRNLQEKSIIAKKDARDAKVIKDEADNLKKKYEQKLERLEKVKDKAYMDAREEAK-- 574
Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE-----SAIAAIVEAHRP--DDDF 658
+V + +++ ADEI ++E E S +E R D
Sbjct: 575 -----------KIVANAKDE-----ADEILKAMRELEKLGIGSGGRQRLEEERKKLKDSL 618
Query: 659 SVSETNTSSFTPQFGEQVHVKSLG--------DKLATVVEVPGDDDTVLVQYGKMRVRVK 710
E N GE + +LG ++ V+ +P + V V+ G M++ VK
Sbjct: 619 EEKEKNLYKMKENDGEVLEKVALGMEAFLPSLNQTVVVISMPDNRGEVQVEAGIMKISVK 678
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
++R + + + E + +V+ N +DLRG+
Sbjct: 679 LKDLR-------------------KTKQSKVEKVKKKRELKLHFSKVE---NRIDLRGLD 716
Query: 771 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
EEA +++D L A + + ++HG GTG++++ + ++L+ H V Y
Sbjct: 717 AEEACYRVDKYLDDAYMGNLGEVTIVHGKGTGILRKAINDMLKRHVHVKNY 767
>gi|260892446|ref|YP_003238543.1| MutS2 family protein [Ammonifex degensii KC4]
gi|260864587|gb|ACX51693.1| MutS2 family protein [Ammonifex degensii KC4]
Length = 775
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 243/840 (28%), Positives = 383/840 (45%), Gaps = 125/840 (14%)
Query: 16 SLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
SL ++ L +T AA ++ P L + D+ +L G LS +E+ V L
Sbjct: 39 SLARVKRRLEETKAAREFLRHHPGFTLGELGDLRPLLRRVARGGQLSAAELWQVAELLSL 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
V E A +SPL EL + L LEEK+ ++L+ D
Sbjct: 99 GRRVKDFFREKAS--------FSPLKELSRKLVSLPFLEEKL-----REVLLPPDDLKAT 145
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLL 190
+ A+ +R +++ +K++ + ++ + +PL+T R R + +K H+ +
Sbjct: 146 ASPLLAQIRRRRREVEAAIKEILEEYLRSPNWQRYLQEPLVTVREGRYVLPVKVEHRDKI 205
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL----SLLTAEIAKSER 246
G+ + S+SGAT F+EP VE N RL E E+ IL SL+ E+A R
Sbjct: 206 -KGLVHDQSASGATLFVEPWEVVEKGNELRRLEIQEREEKERILGELSSLVRQEVASIYR 264
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+L +D A+ A+ + V P L + + ++ ++HPLL
Sbjct: 265 SFIFLSL----LDFVLAKGRLAEEWEAVIPELKERP------LLRLKQVRHPLL------ 308
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
VP+D+++ + ++VITGPNTGGKT
Sbjct: 309 ------------------------------GRRAVPLDLELGDKFDILVITGPNTGGKTV 338
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT GL+ ++++AGL +PA+ + F +LADIGD QS+ +NLSTFS H+ + L
Sbjct: 339 ALKTAGLSVILTQAGLGVPAEAA-EIGLFRRVLADIGDEQSVVENLSTFSAHLRNLARFL 397
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
ESLVL+DE+G+GTDP EG AL +IL+ L R V TTH +++ R
Sbjct: 398 AEADEESLVLLDELGAGTDPREGAALGCAILEELARRRVKVVATTHLSEIKDFALLHPRV 457
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENAA +F ET PTYR++ G G S A +A+ +G K++ RA+ E LRPE ++ R
Sbjct: 458 ENAAVDFDPETFTPTYRLVLGRPGQSLAFEMARRLGLSPKLVARAK---EYLRPEEREAR 514
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEI---MDLYR----EIEDEAKDLDRRAAHLKAK 599
EL L + E + A L E ++ YR +++E + + +RA A
Sbjct: 515 --ELATLLTRRLAEAEKEREEARRLKEEARMSLERYRLAEARLKEEREKIIQRAREEAAA 572
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
+Q ++E + ++++ + Q R E +++ + A+ E +
Sbjct: 573 LVRQARRE-------AEALLKELKEQARKEQVQERERAVQKLRERLGALGERYASPLISI 625
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+ +SF P G+ V V SLG + TVV V GD T VQ G ++ + +RP+
Sbjct: 626 SPSSTPASFVP--GDPVFVPSLGRE-GTVVAVEGDSLT--VQVGAFKLELPAAAVRPV-- 678
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA----S 775
A +P G S A P LDLRG RVEEA S
Sbjct: 679 -----AKKESP-----------GGVAVSTPSARARP-------VLDLRGQRVEEALENLS 715
Query: 776 HQLDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
LD AL R + +IHG GTG ++ V + L +HP+V + +P G V ++
Sbjct: 716 RYLDAALLAGLER--VTIIHGHGTGALRAAVRDYLSSHPQVKSFRLGTPEEGGAGVTVVE 773
>gi|440781736|ref|ZP_20959964.1| recombination and DNA strand exchange inhibitor protein
[Clostridium pasteurianum DSM 525]
gi|440220454|gb|ELP59661.1| recombination and DNA strand exchange inhibitor protein
[Clostridium pasteurianum DSM 525]
Length = 788
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 207/667 (31%), Positives = 334/667 (50%), Gaps = 84/667 (12%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+ T R R + +KA +K +P G+ + SSSGAT F+EP G V NN + E AE
Sbjct: 186 IYTIRGDRYVIPVKAEYKAQVP-GLVHDQSSSGATLFIEPIGLVNLNNEIKEIMLKEQAE 244
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
+ IL L+ ++ ++ ++ V E+D FA+A +A ++ + P V+ +
Sbjct: 245 ISRILEELSQKVYENIVLVENNASIVYELDFIFAKAKYASRINAINP------AVNDNGI 298
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
I+I +HPL+ NP K V +D+ +
Sbjct: 299 IDIVQGRHPLI---------------NPEKV--------------------VAMDVYLGR 323
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ +V+TGPNTGGKT ++KT+GL LM+ +G+ +PA+ + + +F + ADIGD QS+E
Sbjct: 324 DFTSLVVTGPNTGGKTVTLKTVGLLELMAMSGILIPARENSTVSFFKEVFADIGDEQSIE 383
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ IV+I+ SLVL DE+G+GTDP+EG ALA +IL+ LR+R
Sbjct: 384 QSLSTFSSHMTNIVNIMGKADSNSLVLFDELGAGTDPTEGAALAVAILENLRERNTKLAA 443
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY++L K ENA+ EF +ETL+PTYR+L G G SNA I+K +G II
Sbjct: 444 TTHYSELKAYALKTEGVENASVEFDVETLKPTYRLLIGIPGKSNAFEISKRLGLPDYIID 503
Query: 530 RAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
A+K + + L+ E +L Q+L E+ K E AR + L E + + E++
Sbjct: 504 EARKGISSDTLKFE-------DLIQTLQEKSIKAEENARRSEMLKNEAEKIKEKYEEKLY 556
Query: 588 DLD---RRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 644
L+ +A + +E + + E AK + D ++++ R + + ++E
Sbjct: 557 SLNSSREKALNEGRREAKNIIAE---AKEEADRILKNIRELERMGYSSGTRAKLEEERKK 613
Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
+ +E + + S+ + + GE+V++ SL K V+ P V +Q G
Sbjct: 614 LKENLE-NAEESALKNSQNHKGLNRVKEGEEVYIPSLNMK-GIVLSQPDSKGEVQIQAGI 671
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPA-PRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
M++ VK ++ + K + N ++RK+ EA R S S
Sbjct: 672 MKINVK---LKDLSKGKENTSINKELKKIRKR--------------EAKLNLRQVAS--S 712
Query: 764 LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 821
+DLRGM EEA + +D L A + + +IHG GTGV++ + ++L+ H + Y
Sbjct: 713 IDLRGMDGEEAMYNVDKYLDEAYLAGLNSVTIIHGKGTGVLRNVISDMLKRHKHIKSYRL 772
Query: 822 ESPMNYG 828
NYG
Sbjct: 773 ---GNYG 776
>gi|282882263|ref|ZP_06290897.1| MutS2 protein [Peptoniphilus lacrimalis 315-B]
gi|281297884|gb|EFA90346.1| MutS2 protein [Peptoniphilus lacrimalis 315-B]
Length = 788
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 239/835 (28%), Positives = 395/835 (47%), Gaps = 106/835 (12%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICA 67
+I EE K L +TS A++++ + +P L I + +L A G +L+PS +
Sbjct: 34 EIEISTDYEEINKRLKETSEAVSLIVKKGEP-PLFAIISLRDVLRRASLGGILNPSNLID 92
Query: 68 VRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLII 127
+ LR V+ + K + + D ++ + S + +L+ N LE+ I K +I
Sbjct: 93 ISNFLR-VSRLLKNYLKKDDKDENT-ENISIIKDLIDNLYINRNLEDSIN-----KKIIS 145
Query: 128 LDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKAS 185
D+ ++D +RN+ L L++ +I Q+ + +IT R R + ++
Sbjct: 146 EDQVADDASRKLLSIRRNIVKLQGSLREKLEKILQSQKDYLQDCIITMREGRYVIPVRNE 205
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
+K + G+ ++S SG T ++EP V NN L E E IL L+ E+A+
Sbjct: 206 NKSKVK-GLVHDISGSGQTVYIEPIEVVNANNEIKTLKIEEKEEVEKILKELSEEVAEVS 264
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
I+ + EID FA+ + M P V+ + I+++ HPLL
Sbjct: 265 TSIESNELILREIDFIFAKGKLSLDMGANLP------KVNKNRYIDLKNAYHPLL----- 313
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
N ++ V PI+I + + ++ITGPNTGGKT
Sbjct: 314 ------------------NRKIAV------------PINIYIGKDFTSLIITGPNTGGKT 343
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KTLG+ LM++ GL++PA ++ F+ + ADIGD QS+EQNLSTFS H++ IV+I
Sbjct: 344 VTLKTLGILQLMAQYGLHIPADEDSQVGIFNNLFADIGDEQSIEQNLSTFSSHMTNIVEI 403
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
LE V +SLVL DE+G+GTDP+EG ALA SI+ ++ +R + TTHY L
Sbjct: 404 LEKVDEDSLVLFDELGAGTDPTEGAALARSIMDFMLERKIRCISTTHYNQLKIYALTTEG 463
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER-------- 537
+NA+ EF + TL PTY++L G G SNA I+K +G +KII A+ L+ +
Sbjct: 464 VKNASMEFDINTLSPTYKLLIGLPGKSNAFEISKRLGLSQKIINHARDLISQENIEFEKV 523
Query: 538 -LRPERQQHRKSELYQSLMEERRKLESQ-ARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
E+ + + E + + LE Q AR L +I + +I EAKD RR
Sbjct: 524 LASIEKDRTKTREFKELAKRHKSDLEKQNARLEIELK-KIENSKEKILKEAKDEARRILL 582
Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPD 655
+ + E++ K +I + D +++++ NS+ K I +A +P
Sbjct: 583 STKENVDLILDEISSLKAEISS---DQARRIQESGDLLRNSIRKVDNDKKFVIEKAKKPI 639
Query: 656 DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
+D V G+QV S G+ ++TV+E+P + +Q G M+++V K ++
Sbjct: 640 EDIKV------------GDQVR-NSFGN-ISTVLELPDSKGNIYIQSGIMKMKVPKESLT 685
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
I +P + K + S + K+ +DLRG E++
Sbjct: 686 RI---------DPIDEVSKTKTRNIIKS------------KTMDVKSQIDLRGKNFEDSR 724
Query: 776 HQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+D L A + +IHG GTGV+++++ E L+ V Y ++P N G
Sbjct: 725 DLVDKYLDDAFLAGLKTVNLIHGKGTGVLRKKLREYLKKQKNVKSY-SDAPYNEG 778
>gi|317502262|ref|ZP_07960435.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
8_1_57FAA]
gi|336440304|ref|ZP_08619896.1| hypothetical protein HMPREF0990_02290 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316896377|gb|EFV18475.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
8_1_57FAA]
gi|336013585|gb|EGN43462.1| hypothetical protein HMPREF0990_02290 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 791
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 244/836 (29%), Positives = 386/836 (46%), Gaps = 140/836 (16%)
Query: 5 VVQKAQIPFGKS--LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSP 62
+++K +I FG + +EES K L +I G LN+A +LL
Sbjct: 57 IIKKGRISFGDAAPVEESLKRL---------------------EIGGALNTA---ELL-- 90
Query: 63 SEIC-AVRRTLRAV----NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
IC + T RA ++ + L + ++ D L+ +PL ++ C ++E E
Sbjct: 91 -RICRLLSNTARAKSYGRHDTQEDLADCLDIYFDGLEPLTPLSNEIERC-IISEDE---- 144
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKR 174
I D AS L+ IR R++ NL+ + + + + LIT R
Sbjct: 145 ---------ISDDASSALKHIR----RSINNLNDRVHTTLSGLVNGSLRTYLQDALITMR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R C+ +KA ++ + G+ + S+SG+T F+EP V+ NN L E E IL
Sbjct: 192 GDRYCIPVKAEYRSQV-QGLIHDQSASGSTLFIEPMAIVKLNNDLKELYVQEQDEIRKIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E A+ EI+ + ++D FAR A M PIL+ + I I
Sbjct: 251 ASLSEEAAQYIEEIRTDYRSLTDLDFIFARGALALTMRASRPILNEEGR------IRIRE 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPLL + VPI + + E ++
Sbjct: 305 GRHPLLDQKKV-----------------------------------VPITVSLGDEFSLL 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
+ITGPNTGGKT S+KT+GL +LM +AGL++PA + + F + ADIGD QS+EQ+LST
Sbjct: 330 IITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAGDRSEIAVFRQVYADIGDEQSIEQSLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R + TTHY+
Sbjct: 390 FSSHMTNIVSFLKKVDDRSLVLFDELGAGTDPTEGAALAIAILSHLHKRNIRTMATTHYS 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L ENA EF +E+LRPTYR+L G G SNA I+ +G II A+K
Sbjct: 450 ELKIYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPGYIIDDAKK- 508
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
R Q +L L RR +E + A+ E L R+ + + L+ +
Sbjct: 509 ----RLSEQDVSFEDLLSDLEASRRTIEKEQAEIAAYKKEAETLKRQAVQKQEKLEEQRD 564
Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESE--------SAI 645
+ + ++ L AK D +++F + + SA E+ KE E ++
Sbjct: 565 RIIREANEKANAILREAKEVADETIRNFHKFGKENISAAEME---KERERLRKKIKDTSA 621
Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
+A ++ ++P + S+ + GE V V S+ + T+ +P V VQ G +
Sbjct: 622 SASLKTNKPKKTYKPSDF-------KLGESVKVLSM-NLTGTIGSLPDARGNVTVQMGIL 673
Query: 706 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 765
R +V +++ I + + AP+ + +R + S ++ S P + +
Sbjct: 674 RSQVNISDLEII-----EEVSPYAPK----RMNRTAKSKIKMSKSLSVSPEI-------N 717
Query: 766 LRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
L G V+EA +LD L A + + V+HG GTG +++ + E LR V Y
Sbjct: 718 LLGKTVDEAVAELDKYLDDALLSHLNSVRVVHGKGTGALRKGIHEYLRRQKHVKSY 773
>gi|406671086|ref|ZP_11078326.1| MutS2 family protein [Facklamia hominis CCUG 36813]
gi|405581180|gb|EKB55231.1| MutS2 family protein [Facklamia hominis CCUG 36813]
Length = 784
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 222/784 (28%), Positives = 372/784 (47%), Gaps = 92/784 (11%)
Query: 60 LSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN-CNFLTELEEKIGF 118
L+ E+ + + L V+ V + AE D R P L + C L++++ +I
Sbjct: 85 LNGRELAQIGQLLSTVSQVKHFFDQEAEED-----RIYPALSFWADQCTVLSQVQLRIDQ 139
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRM 178
+ + +L AS +L IR ++ + + + L ++ +A + LIT R R
Sbjct: 140 TV-SEDGTVLSSASSELARIRRQQGQTENQIRTQLNQLLKS--KANILSDALITIRNDRY 196
Query: 179 CVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT 238
+ +KA + L I + S++G T ++EP+ ++ NN L + E AE +L ++
Sbjct: 197 VLPVKADFRGQLAGNIH-DQSATGQTIYVEPQAVIDLNNRLSSLYSQEKAEIERLLYEIS 255
Query: 239 AEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
E+ +K + ++D A+A + + + P S ++ V+ + +HP
Sbjct: 256 LELIPYLDALKGNQTVIGQLDFIQAKAEYGKELQATTPQFSKENQVALWQA------RHP 309
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
L+ +P D V DI + RV++ITG
Sbjct: 310 LV---------------DP--------------------DQVVANDILIGETYRVMLITG 334
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT +KT+GL LM +AGL +P + +L FD I ADIGD QS+EQNLSTFS H
Sbjct: 335 PNTGGKTIVLKTIGLIQLMGQAGLQVPCQEGSQLGVFDQIFADIGDEQSIEQNLSTFSSH 394
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV I+E + +SL+L DE+GSGTDP EG ALA +IL +LR + + TTHY +L
Sbjct: 395 MTNIVSIIESATYQSLILFDELGSGTDPQEGAALAMAILDHLRKIGAVILATTHYPELKV 454
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
K + NAA EF +++L PTY ++ G G SNAL I++ +G D I+ +A++ +
Sbjct: 455 YGHKTPKTINAAMEFDVDSLSPTYHLMIGVPGRSNALEISRRLGLDPSILDQAKQGI--- 511
Query: 539 RPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKA 598
+ H +E+ L ERR+ ++ + A L + L ++ E + A L
Sbjct: 512 --SQDSHSLNEMVAKLERERREASTKNQQAQDLLDQSASLLADLRTEYDRYLHQKADLIE 569
Query: 599 KETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEIN-SLIKESESAIAAIVEAHRPDD 656
K +Q +++ + Q + ++Q+ + QL I S++ + +SA+ + +A
Sbjct: 570 KAKRQANEKVAETQKQAEAILQEIRDLQLVQGQNHTIKESVLIDKKSALDHLKQAEDLRK 629
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
+ V + + + G+ V V + T+V + D + LVQ G +++ + +++
Sbjct: 630 N-KVLKKAKNQRRLKVGDDVEVLPYSQR-GTIVAI--DKEQYLVQMGILKMTFSEADLKL 685
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ RK N RQ+GS K +LDLRG R + A
Sbjct: 686 LTKVDRKEKINL---------HRQAGS---------------KVKTTLDLRGERYDLAMK 721
Query: 777 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY---GCTV 831
+L L A + ++ +IHG GTG ++ V + L HP+V +E SP N G T
Sbjct: 722 RLTQYLDQALLSNHPMVTIIHGKGTGALRSGVQKALEKHPQVDHFEY-SPANAGGNGSTQ 780
Query: 832 AYIK 835
Y K
Sbjct: 781 VYFK 784
>gi|257886737|ref|ZP_05666390.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
gi|257822791|gb|EEV49723.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
Length = 786
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 349/727 (48%), Gaps = 109/727 (14%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL--------VQYGKMRVRV 709
ET + + ++ + GD++ +V G T+L V+ G +++ V
Sbjct: 620 LHQEETLKKNKVLKKAKEQKILKPGDEV--LVTTYGQRGTLLRKNGNQWQVEIGILKMNV 677
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 678 SEDELTPV-----------AP----QKEPTQRVVYAVRSESSSHVP------NQLDLRGK 716
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 827
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 717 RYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APANQ 775
Query: 828 GCTVAYI 834
G A I
Sbjct: 776 GGNGATI 782
>gi|239628827|ref|ZP_04671858.1| MutS2 family protein [Clostridiales bacterium 1_7_47_FAA]
gi|239518973|gb|EEQ58839.1| MutS2 family protein [Clostridiales bacterium 1_7_47FAA]
Length = 843
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 241/769 (31%), Positives = 363/769 (47%), Gaps = 88/769 (11%)
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAER 142
+ A E D DSL+ PL L+ LT L +I CI + I D AS L +R
Sbjct: 147 SNAPEDDYDSLE---PLFAGLEP---LTPLNNEIKRCILSEDEIA-DDASPGLSHVRRSM 199
Query: 143 K----RNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
K R L+S+L + + A +IT R R C+ +K+ +K + G+ +
Sbjct: 200 KVAADRIHTQLNSILNSNRSYLQDA------VITMRDGRYCLPVKSEYKNQV-SGMVHDQ 252
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
SS+G+T F+EP V+ NN L E E A+L+ L+ + A E++ + + ++
Sbjct: 253 SSTGSTLFIEPMAIVKLNNEIRELEIQEQKEIEAVLASLSNQAAPYCGELRMNQELLAQL 312
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D FA+AG A+ P+ + + + I+I+ +HPLL NP
Sbjct: 313 DFIFAKAGLARHYKCSAPVFNDRGY------IHIKDGRHPLL---------------NPQ 351
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
+ VPI+I + + ++++TGPNTGGKT S+KT+GL +LM
Sbjct: 352 TA--------------------VPINIWLGRDFDLLIVTGPNTGGKTVSLKTVGLFTLMG 391
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+AGL++PA L FD + ADIGD QS+EQ+LSTFS H++ V IL + SL L D
Sbjct: 392 QAGLHIPAWEGSELAVFDEVFADIGDEQSIEQSLSTFSAHMTNTVRILNEANPRSLCLFD 451
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDP+EG ALA +IL +L + + TTHY++L ENA EFS+ETL
Sbjct: 452 ELGAGTDPTEGAALAIAILTFLHNMKCRTMATTHYSELKVFALTTPGVENACCEFSVETL 511
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
+PTYR+L G G SNA I+ +G II A R E + +L SL R
Sbjct: 512 QPTYRLLIGVPGKSNAFAISSKLGLPDYIIDEA-----RNHLEAKDVSFEDLLTSLESSR 566
Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
+E + + EI L + + + LD R + T++ Q+ L AK D
Sbjct: 567 LTIEKEQAEINAYKDEIAKLKSRLTQKEERLDERKDKVIRSATEEAQRILREAKETADQT 626
Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS-FTP---QFGE 674
++ N+L + IN ++E S + + + DD +V S +P + G+
Sbjct: 627 IKQI-NKLTAGAG--INKELEEQRSRLRD--QLKKTDDKLAVKAKGPSQPISPKKLKIGD 681
Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP--NSKRKNA--ANPAP 730
V V S+ K TV +P + VQ G +R V NIR + N K NA + +
Sbjct: 682 GVKVLSMNLK-GTVSTLPNSKGDLYVQMGILRSLV---NIRDLELLNEKDINATLGDGSS 737
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESR 788
+ + +GSS + S + T N L GM V+EA ++ L A
Sbjct: 738 ISYGGKSPAKGKGSGSSQIKVSKSATISTEVN---LIGMTVDEALPVMEKYLDDAYLAHL 794
Query: 789 SVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+ V+HG GTG +K V + LR V ++ Q + G TV K
Sbjct: 795 PSVRVVHGRGTGALKNAVHKRLRQLKYVKEFRLGQFGEGDSGVTVVTFK 843
>gi|217967690|ref|YP_002353196.1| MutS2 family protein [Dictyoglomus turgidum DSM 6724]
gi|217336789|gb|ACK42582.1| MutS2 family protein [Dictyoglomus turgidum DSM 6724]
Length = 778
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 227/818 (27%), Positives = 392/818 (47%), Gaps = 110/818 (13%)
Query: 23 LLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
LLN+ + P S I +I ++ A G ++ P E + +TL VW KL
Sbjct: 47 LLNEEAFKTIYSFGYP-SFSGIRNIEIYIDKAEKGGIVYPDEFEEIVKTL----EVWGKL 101
Query: 83 TEAAELDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
+ E +++ +P L KN + L +L +I C+ +I D AS +L+ IR +
Sbjct: 102 RDYQE----KVRKTAP--NLWKNTLHNLHDLYIQIRKCVQDGAVI--DSASPELKQIRQK 153
Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
++R + + L+ + + ++ G + +IT R R V ++ + + GI + S+S
Sbjct: 154 KERLNQKVRETLENIIQKEWR-GYLQDQIITIRHGRYVVPVRQEFRGKI-QGIVHDQSTS 211
Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
G T ++EP+ VE NN L + E E IL+ LT+ + + EI + E+D
Sbjct: 212 GLTVYVEPQVIVELNNQIALLESEEKREIERILTRLTSVLLSYKEEILENLRTSFELDFV 271
Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 321
+A+ +A+ + PIL + + + +HP L
Sbjct: 272 YAKVKWAEKYKAITPILEKDKPI-----VILREARHPFL--------------------- 305
Query: 322 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 381
D VPI ++V +VITGPNTGGKT ++KT+GL L+++AG
Sbjct: 306 ---------------GDKAVPITLEVGRYFHTLVITGPNTGGKTVTLKTIGLFVLLNQAG 350
Query: 382 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR----ESLVLI 437
+ +PAK L F+ + ADIGD QS+EQNLSTFS H++ I+ ++ + R + LVLI
Sbjct: 351 IPVPAKEGTTLGIFNQVFADIGDEQSIEQNLSTFSSHMTNIISFIDYLERTGDKKVLVLI 410
Query: 438 DEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLET 497
DE+G+GTDP EG ALA ++L+Y ++ + V+ THY L + K ENA+ EF +
Sbjct: 411 DELGAGTDPQEGAALAVALLEYFHEKGTINVIATHYPQLKVIASKYPGMENASMEFDEIS 470
Query: 498 LRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEE 557
LRP Y++ G G SNA+ I+K +G RKI+ RA L+ + + E+ L ++
Sbjct: 471 LRPLYKVAMGIPGKSNAILISKRLGLPRKILDRAVSLL-----SENEIKLEEVIGELQKD 525
Query: 558 RRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDT 617
RRK + + + E+ + + I +E + L++ LK K +++ ++++ + ++
Sbjct: 526 RRKYQEEIDKINKVKKELQEEKKRILEEREILEKEKEKLKTKYKEELFKDISKIENRLKE 585
Query: 618 VVQDFENQ---LRDASA--DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
+++ + + ++DA + +E+ L KE +V R E S+ PQ
Sbjct: 586 IIRRLQEESLSMKDAQSLQEEVKKLKKE-------LVLEER-------EEPKALSYVPQV 631
Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 732
G++V ++S K V+EV D+ LVQ G ++++V + AP L
Sbjct: 632 GDRVVLRS-TKKEGYVIEVDADEKIALVQVGLLKIKVPWTEL--------------APSL 676
Query: 733 RKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSV 790
+++ + N+E+ PR +++R M V+E ++ L A
Sbjct: 677 KEESQLFSYVKVEKINQESI--PR------EINIRMMTVDEGLEEVKKYLEKAFLAGLKR 728
Query: 791 LFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
+ ++HG GTG ++ V + L P V +Y P G
Sbjct: 729 VRIVHGKGTGKLRNAVHDYLSKVPYVKEYYLAPPNEGG 766
>gi|229135384|ref|ZP_04264173.1| hypothetical protein bcere0014_42800 [Bacillus cereus BDRD-ST196]
gi|228648080|gb|EEL04126.1| hypothetical protein bcere0014_42800 [Bacillus cereus BDRD-ST196]
Length = 786
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 233/796 (29%), Positives = 378/796 (47%), Gaps = 109/796 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G LQ +L
Sbjct: 65 LGGISDIRANIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVELQ----IL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546
Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKQEAEGIIQEL-RQLRKAQLINV 605
Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
+ LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFGQKG 656
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 804 ERVLEILRNHPRVAKY 819
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKTY 768
>gi|336435678|ref|ZP_08615393.1| hypothetical protein HMPREF0988_00978 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336001131|gb|EGN31277.1| hypothetical protein HMPREF0988_00978 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 791
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 200/665 (30%), Positives = 320/665 (48%), Gaps = 91/665 (13%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R CV +KA ++ + +G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITLRGDRYCVPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ + A+ EI+ + ++D FAR A M PIL+++
Sbjct: 245 EIQVILARLSEDTAEYIEEIRTDYRVLTDLDFIFARGQLALSMSASRPILNNEGR----- 299
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I+I +HPLL + VPI + +
Sbjct: 300 -IHIRDGRHPLLDARKV-----------------------------------VPITVTLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ ++++TGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 EDFSLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAADRSELAVFHQVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L+ V +SLVL DE+G+GTDP+EG ALA +IL +L +R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKDVDEQSLVLFDELGAGTDPTEGAALAIAILSHLHNRGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF +E+L+PTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVFALSTEGVENACCEFDVESLKPTYRLLIGIPGKSNAFAISGKLGLPDYII 503
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
+ A+ R Q +L L +R +E + + E+ L + + +
Sbjct: 504 EDAKN-----RLTEQDVSFEDLLTDLENSKRIIEKERDEIQTYKREVERLKTQTRQKQEK 558
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA------SADEINSLIKESE 642
LD + + + T++ L AK D +++F ++ + K +
Sbjct: 559 LDEQRDRILREATEKANAILREAKEMADETMKNFRKFGKEGISAAEMERERERLRKKIKD 618
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
+A + ++ +P + S+ + GE V V S+ + T+ +P V VQ
Sbjct: 619 TAGKSALKPQKPKKTYKPSDF-------KLGESVKVLSM-NLTGTISSLPDSRGNVTVQM 670
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANP-APRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G +R +V +++ I ANP AP+ R++GS +++ SK
Sbjct: 671 GILRSQVNISDLEIIEE------ANPYAPK-----NMRRTGSG-----------KIKMSK 708
Query: 762 N-----SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
+ ++L G V+EA +LD L A + + V+HG GTG +++ + E LR
Sbjct: 709 SLSVRPEINLLGKTVDEAVAELDKYLDDALLSHLNTVRVVHGKGTGALRKGIHEYLRRQK 768
Query: 815 RVAKY 819
V Y
Sbjct: 769 HVKSY 773
>gi|227552101|ref|ZP_03982150.1| MutS family DNA mismatch repair protein [Enterococcus faecium
TX1330]
gi|424762404|ref|ZP_18189913.1| MutS2 family protein [Enterococcus faecalis TX1337RF]
gi|431033419|ref|ZP_19491265.1| MutS2 protein [Enterococcus faecium E1590]
gi|227178767|gb|EEI59739.1| MutS family DNA mismatch repair protein [Enterococcus faecium
TX1330]
gi|402424629|gb|EJV56797.1| MutS2 family protein [Enterococcus faecium TX1337RF]
gi|430564520|gb|ELB03704.1| MutS2 protein [Enterococcus faecium E1590]
Length = 786
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 349/727 (48%), Gaps = 109/727 (14%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL--------VQYGKMRVRV 709
ET + + ++ + GD++ +V G T+L V+ G +++ V
Sbjct: 620 LHQEETLKKNKVLKKAKEQKILKPGDEV--LVTTYGQRGTLLRKNGNQWQVEIGILKMNV 677
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 678 SEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRGK 716
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 827
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 717 RYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APANQ 775
Query: 828 GCTVAYI 834
G A I
Sbjct: 776 GGNGATI 782
>gi|347530511|ref|YP_004837274.1| DNA mismatch repair protein [Roseburia hominis A2-183]
gi|345500659|gb|AEN95342.1| DNA mismatch repair protein [Roseburia hominis A2-183]
Length = 795
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 249/832 (29%), Positives = 380/832 (45%), Gaps = 98/832 (11%)
Query: 21 QKLLNQTSAALA-MMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVW 79
++L QTS AL+ + + L S + DI L G LS E+ V L +
Sbjct: 44 EQLQQQTSDALSRLFKYGSLSFSGVTDIRDSLKRLEIGGALSAIELLRVCSLLESA---- 99
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR 139
K+ A D+ Q L L LT L ++I CI + I D AS L IR
Sbjct: 100 KRAKAFARSQDDNDQPDDSLTSLFAGIEPLTPLCDEIRRCILSEDEIA-DDASSTLHSIR 158
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
+ + + + + + + +IT R R C+ +KA K L+P G+ + S
Sbjct: 159 RSMRGMNDKIRAQMNSMINNTTTRSYLQDTVITMRDGRYCLPVKAEAKSLVP-GMIHDQS 217
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
S+G+T F+EP V NN L E E IL+ L+ A ++ + + E+D
Sbjct: 218 STGSTLFIEPMAVVNLNNEYKELQLREQEEIEVILAGLSNLTASYATQLLADYELLTELD 277
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
FARA FAQ +GV P+ + D I+I +HPLL +P K
Sbjct: 278 FIFARAAFAQTYNGVAPLFND------DGRIHIRKGRHPLL---------------DPKK 316
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VPID+++ + R++++TGPNTGGKT S+KT+GL +LM +
Sbjct: 317 V--------------------VPIDVRLGEDFRLLIVTGPNTGGKTVSLKTVGLLTLMGQ 356
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
+GL++PA L FD + ADIGD QS+EQ+LSTFS H+ I+ ILE V+ SLVL DE
Sbjct: 357 SGLHIPASERSELGIFDEVFADIGDEQSIEQSLSTFSSHMVNIIRILEQVNDRSLVLFDE 416
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+ +GTDP+EG ALA SIL L + TTHY++L ENA EF + TL
Sbjct: 417 LCAGTDPTEGAALAISILSKLHLYGARIMATTHYSELKVYALSTPGVENACCEFDVATLS 476
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERR 559
PTYR+L G G SNA I++ +G +I A+ R + + +L L + R
Sbjct: 477 PTYRLLIGIPGKSNAFAISEKLGLPSDLITDAKG-----RISKSEGDFEDLIADLEKSRS 531
Query: 560 KLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV 619
+E + AEI L ++E + + LD + + +Q L AK D +
Sbjct: 532 TIEREQLEINQYKAEIESLKEKLEQKQERLDSSRNKILREANEQAYNILKEAKDVADETI 591
Query: 620 QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSF----TPQ---F 672
++F N+ A A ++ + KE + +A + +SE +S P+
Sbjct: 592 RNF-NKYGKAGA-PVSEMEKERTKLRGKMDKAAQ-----KMSEQKKASVPNHNVPKKLRI 644
Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 732
G+ V V S+ K TV +P + VQ G +R V N++ + + AP
Sbjct: 645 GDSVKVISMNLK-GTVHSLPNARGDLYVQMGILRSLVNINDLILLEE-------DAAPGT 696
Query: 733 RKQQEDRQSGSAGSSNEEASYGPRVQTSKNS-----LDLRGMRVEEASHQLDIAL--ACW 785
+K Q+ SAG +++ SK++ ++L G +EA LD L A
Sbjct: 697 KKFQKT----SAG----------KIKMSKSASVSTEINLIGKTTDEAIPLLDKYLDDAYL 742
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+ ++HG GTG ++ V L+ V + + + G T+A K
Sbjct: 743 AHLPSVRIVHGKGTGALRNAVQAHLKRLKYVKSFHLGEFGEGDAGVTIAEFK 794
>gi|325264641|ref|ZP_08131371.1| MutS2 protein [Clostridium sp. D5]
gi|324030303|gb|EGB91588.1| MutS2 protein [Clostridium sp. D5]
Length = 791
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 213/667 (31%), Positives = 316/667 (47%), Gaps = 95/667 (14%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R C+ +KA ++ + +G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCIPVKAEYRSQV-NGMIHDQSSTGSTLFIEPMAVVKLNNDLKELYAKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+A+ A EI + ++D FAR A M+ P+L+ +
Sbjct: 245 EIQVILARLSADTALYIEEIHNNYKLLTDLDFIFARGSLALSMNASRPVLNQEGR----- 299
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I I +HPLL +P K VPI + +
Sbjct: 300 -IRIREGRHPLL---------------DPRKV--------------------VPISVTLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ +++ITGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 EDFTLLIITGPNTGGKTVSLKTVGLFTLMGQAGLHIPAGDRSELAIFRQVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL YL R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLQEVDENSLVLFDELGAGTDPTEGAALAIAILSYLHKRGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF +E+LRPTYR+L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDVESLRPTYRLLLGIPGKSNAFAISGKLGLPDYII 503
Query: 529 QRA-QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
+ A Q L E + ++ L+ + LES RT I RE+E
Sbjct: 504 EDAKQHLTE----------QDASFEDLLTD---LESGKRTIEKEREAIEAYKREVE---- 546
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
L +A + K +Q ++ L A + T++++ +L D + KE S A
Sbjct: 547 ILKNQAKQKQVKIEEQRERILKEANEKAGTILRE-AKELADETMKNFRKFGKEGIS--VA 603
Query: 648 IVEAHRPDDDFSVSETNTS----------SFTP---QFGEQVHVKSLGDKLATVVEVPGD 694
+E R + ET+ + ++ P + GE V V S+ + TV +P
Sbjct: 604 EMEKERERLRQKMKETSAAGSMAVQKQKKAYKPGDFKLGESVKVLSM-NLTGTVSSLPDS 662
Query: 695 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 754
+ VQ G +R +V +++ I PA K + G S + S
Sbjct: 663 RGNLTVQMGILRSQVNISDLEII--------EEPASYNTKSMKRTSKGKLKMS-KSLSVS 713
Query: 755 PRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRN 812
P + +L G V+EA +LD L A S + V+HG GTG +++ + E LR
Sbjct: 714 PEI-------NLLGKTVDEAVSELDKYLDDAILSHLSTVRVVHGKGTGALRKGIHEFLRR 766
Query: 813 HPRVAKY 819
V Y
Sbjct: 767 QKHVKSY 773
>gi|431762509|ref|ZP_19551071.1| MutS2 protein [Enterococcus faecium E3548]
gi|430625201|gb|ELB61851.1| MutS2 protein [Enterococcus faecium E3548]
Length = 786
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 349/727 (48%), Gaps = 109/727 (14%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL--------VQYGKMRVRV 709
ET + + ++ + GD++ +V G T+L V+ G +++ V
Sbjct: 620 LHQEETLKKNKVLKKAKEQKILKPGDEV--LVTTYGQRGTLLRKNGNQWQVEIGILKMNV 677
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 678 SEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRGK 716
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 827
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 717 RYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APANQ 775
Query: 828 GCTVAYI 834
G A I
Sbjct: 776 GGNGATI 782
>gi|306820562|ref|ZP_07454193.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551379|gb|EFM39339.1| DNA mismatch repair protein MutS [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 785
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 234/846 (27%), Positives = 387/846 (45%), Gaps = 139/846 (16%)
Query: 23 LLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL QTS A M+ ++ + +I D+ A G +L + V+ TLR
Sbjct: 46 LLEQTSEAQKMIVTKGAIPFGSIYDVRLQAKKASIGSILDAKSLIKVKETLRT------- 98
Query: 82 LTEAAELDGDSLQRYS--PLLELLK-NCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
A + ++++ P++ + N +E++I I + I D AS +L I
Sbjct: 99 ----ARISKSYVEQFEDIPVISSISDNIRVSKSIEDEIERAIISETEI-SDDASTELRRI 153
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R + +++ + L ++ A + ++T R R + +K+ ++ P GI +
Sbjct: 154 RRQMANEKQSIKNKLNEIVTSAKYAKILQDTVVTVRNDRFVLPVKSENRDQFP-GIVHDT 212
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
SSSGAT F+EP V NN L E E IL LT+ + + EI Y + + E+
Sbjct: 213 SSSGATLFIEPMAIVNMNNHLSALKQEEYREVERILEFLTSMVGEFSNEIIYDCEMLEEL 272
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D A+ + MD + P ++ +V F ++ +HPL+
Sbjct: 273 DFIMAKGKLSVSMDAIEPKINQDKYVRFVNA------RHPLIE----------------- 309
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
K V +S + +G +VITGPNTGGKT ++KTLGL +M
Sbjct: 310 KDKVVSSTIEIGK------------------SYTTLVITGPNTGGKTVTLKTLGLLCIML 351
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+ GL++P F+ I ADIGD QS+ Q+LSTFS H++ IV I+ V SLVL D
Sbjct: 352 QCGLHIPCDIGSSGYIFNNIFADIGDEQSIAQSLSTFSAHMTNIVGIMNEVDENSLVLFD 411
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDP EG LA SIL L+++ L TTHY++L + NA+ EF + TL
Sbjct: 412 ELGAGTDPVEGAGLAISILDTLKEKDILTAATTHYSELKNYALTVDKVTNASVEFDVNTL 471
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPE-------RQQHRKSE 549
PTYR++ G G SNA I++ +G IIQRA+ + E ++ E + ++ E
Sbjct: 472 SPTYRLIIGIPGKSNAFEISQKLGLSTGIIQRARDSIHTESIKVEDVITKLDKIKNEYEE 531
Query: 550 LYQSLMEE-------RRKLESQARTAASLHAEIMD--------LYREIEDEAKDLDRRAA 594
Q L +E R KLE++ R A +I++ L E ++EA ++++
Sbjct: 532 KKQRLEKELEDAEFIRLKLENRERRAQQNSEKILEEAKNKARSLVEEAKNEADEINKVLN 591
Query: 595 HL-KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
L K+ + + + +++N K +I+T +D A + L+K +E +
Sbjct: 592 KLKKSSDYKNIDKKMNEIKGRINT--------YKDKYAKKKEELVKSNE----------K 633
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
P ++ V +T + F + V S+ DK + V+VQ G +++ +KK N
Sbjct: 634 PIENVGVGDT---VYVNSFAQNAKVLSVDDK----------KNEVVVQLGAIKMTLKKEN 680
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
I + + ++ + ++ K + Q + S+DLRGM +E
Sbjct: 681 I-SLEKKDKDTKSSKSGKIMK--------------------SKAQGATTSVDLRGMDLET 719
Query: 774 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGC 829
A ++D I + L +IHG+GT V+K+ V L+ H + Y Q G
Sbjct: 720 ALMEVDKYIDDSYLAGLEQLTIIHGVGTLVLKKGVQSYLKKHKHIKNYRDGQYGEGGMGV 779
Query: 830 TVAYIK 835
T+ +K
Sbjct: 780 TIVTLK 785
>gi|228999325|ref|ZP_04158905.1| hypothetical protein bmyco0003_38810 [Bacillus mycoides Rock3-17]
gi|229006880|ref|ZP_04164512.1| hypothetical protein bmyco0002_37820 [Bacillus mycoides Rock1-4]
gi|228754373|gb|EEM03786.1| hypothetical protein bmyco0002_37820 [Bacillus mycoides Rock1-4]
gi|228760522|gb|EEM09488.1| hypothetical protein bmyco0003_38810 [Bacillus mycoides Rock3-17]
Length = 786
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 237/797 (29%), Positives = 377/797 (47%), Gaps = 111/797 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + K+ E +G L P+L
Sbjct: 65 LGGIFDIRPNVKRAKIGSMLSPHELLDIASTMYGSRQM-KRFIEDMVDNGVEL----PIL 119
Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETYVAQIVSLYDLEKKITSCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ + +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVALEADTVLANVEVIANLDFIFAKAFYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ + +N+ +HPL+ +P
Sbjct: 294 PIVNNERY------MNLRQARHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP DI + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNDIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVLDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVYNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
I+K +G +I RA+ + + + E + E ++ E + E + + LH
Sbjct: 493 EISKRLGLSDHVIDRARNHIGTDTNKIENMIAKLEESQKNAEREWNEAEEHRKQSEKLHR 552
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A
Sbjct: 553 ELQRQIIEFNDE-----RDERLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLAS 604
Query: 634 I--NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLAT 687
+ + LI+ E A +V+ R V NT+ + G++V V + G K
Sbjct: 605 VKDHELIEAKSRLEGAAPELVKKQR------VKVKNTAPKQQLRAGDEVKVLTFGQKGQL 658
Query: 688 VVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 747
+ +V D+ VQ G ++++VK++++ I N P E + +
Sbjct: 659 LKKV--SDNEWNVQIGILKMKVKESDMEYI------NTPQPV-------EKKAVATVKGR 703
Query: 748 NEEASYGPRVQTSKNSLDLRGMRVEEASHQL-----DIALACWESRSVLFVIHGMGTGVV 802
+ S LDLRG R E A ++ D LA + S +IHG GTG +
Sbjct: 704 DYHVSL---------ELDLRGERFENAMMRVEKYLDDAQLANYPRVS---IIHGKGTGAL 751
Query: 803 KERVLEILRNHPRVAKY 819
++ V + L+ H V Y
Sbjct: 752 RQGVQDYLKKHRGVKNY 768
>gi|227534485|ref|ZP_03964534.1| DNA mismatch repair protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|227187884|gb|EEI67951.1| DNA mismatch repair protein [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
Length = 786
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 242/852 (28%), Positives = 399/852 (46%), Gaps = 115/852 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRRLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L +R E + S+ ++ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKARLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +P K VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
+ H + + L ++R+ E+ Q A S+H E+ Y++ E
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-- 562
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
R A +AK+ + ++ + + D +++ + QL + + N LI +A
Sbjct: 563 ---RDAQLQQAKD--KANTLVDKTQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613
Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
A+ + H+ P + G++V V S D+ T++E D VQ G
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
++++V + + I SK+ A P ++ SG S GP +L
Sbjct: 672 LKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS-------GP-----STTL 711
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRG R ++A LD I A + +IHG+GTG ++ V + L+ + +V Y
Sbjct: 712 DLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYG-F 770
Query: 823 SPMNYGCTVAYI 834
+P N G + A I
Sbjct: 771 APQNAGGSGATI 782
>gi|90962080|ref|YP_535996.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118]
gi|227891101|ref|ZP_04008906.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741]
gi|122448818|sp|Q1WT38.1|MUTS2_LACS1 RecName: Full=MutS2 protein
gi|90821274|gb|ABD99913.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118]
gi|227866975|gb|EEJ74396.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741]
Length = 786
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 229/798 (28%), Positives = 365/798 (45%), Gaps = 98/798 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI G LNS E+ A+ R LRA N V + + A D+ + L + +
Sbjct: 79 DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG 165
L E+ +K+ I+ + D AS L+ IR + E + L +
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNAYTRGT-NSKY 183
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+ ++T R R + +K ++ GI + SSSG T F+EP VE NN RL
Sbjct: 184 LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQ 239
Query: 226 EIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
++AE IL L+ E+A E+ + +D A+A +A + PILS ++
Sbjct: 240 QVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKEN 299
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
V + + HPLL +K V+N
Sbjct: 300 DVY------LRQVWHPLL----------------DMKKAVKN------------------ 319
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
DI + + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ FD I ADI
Sbjct: 320 -DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADI 378
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QS+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 379 GDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGA 438
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
+ V TTHY +L + NA+ EF TL+PTYR+L G G SNA +I++ +G
Sbjct: 439 KGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLG 498
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
D+ I+ A++L + +E+ L+ +R E + E +L+ ++
Sbjct: 499 LDKMIVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHDL 553
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKES 641
E +R+ ++ + ++ Q + K + D ++ + ++ AS E SLI
Sbjct: 554 ETNFHQFERQKENMLEQAKERANQIVEETKKKSDELISELRKMKMSAASNIEEGSLIDAQ 613
Query: 642 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
A E + + P + V V S G + V+ + VQ
Sbjct: 614 GRVNALHQETNLKKNKVLRKAKQQQELHPN--DDVMVNSYGQR--GVLLRKAGNHAWEVQ 669
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G +++++ ++++ I K + +++G+ S+ + P
Sbjct: 670 LGILKMKIDESDLEKIK--------------VKDTQPKRAGAVLKSSSSSHVSP------ 709
Query: 762 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+LDLRG R E A ++D I A + + +IHG GTG ++ ++ L+ + V +
Sbjct: 710 -TLDLRGERYENAMVKVDRYIDAAVLAGYNSVTIIHGKGTGALRTGIINYLKQNKAVKNF 768
Query: 820 EQESPMN--YGCTVAYIK 835
E SP N G TV Y K
Sbjct: 769 EFASPNNGGNGATVVYFK 786
>gi|387930060|ref|ZP_10132737.1| recombination and DNA strand exchange inhibitor protein [Bacillus
methanolicus PB1]
gi|387586878|gb|EIJ79202.1| recombination and DNA strand exchange inhibitor protein [Bacillus
methanolicus PB1]
Length = 785
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 246/817 (30%), Positives = 386/817 (47%), Gaps = 118/817 (14%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI A G LSP E+ V T+ A + + + + E D P+L
Sbjct: 65 LGGIFDIRPHTKRAAIGGSLSPHELIQVASTVHASRQLKRFIEDLNEETNDL-----PIL 119
Query: 101 -ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL----ELIRAERKRNMENLDSLLKK 155
+ ++ L ELEE I ID + +LD ASE L + +R + R E L+S+++
Sbjct: 120 AKYVERIIVLAELEEAIKHAID-ESGEVLDGASETLRSLRQQLRTKEARVRERLESMIRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ GI + SSSG T F+EP+ V+
Sbjct: 179 SNAQKMLSDAI----VTIRNDRFVIPVKQEYRTYY-GGIIHDQSSSGQTLFIEPQAIVQL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL L+ ++ + E++ ++ + E+D FA+A ++ +
Sbjct: 234 NNDLQATRVKEQQEIERILHELSQKVGEYSGELETIVLVLAELDFMFAKARYSSKIKASK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P+++++ +S + +HPL+ P+
Sbjct: 294 PLMNNEGRISLIKA------RHPLI----------------PI----------------- 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
D VP DI + + +VITGPNTGGKT ++KT+GL +LM+++GL +PA + + F
Sbjct: 315 --DEVVPNDISLGKDFSTIVITGPNTGGKTVTLKTVGLCTLMAQSGLQIPALDGSEMAVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ ADIGD QS+EQ+LSTFS H+ IVDIL V SLVL DE+G+GTDP EG ALA S
Sbjct: 373 GSVYADIGDEQSIEQSLSTFSSHMVNIVDILNKVDFNSLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + R + TTHY +L NA+ EF +ETL PTY++L G G SNA
Sbjct: 433 ILDEVYKRGAKVIATTHYPELKVYGYNREGVINASVEFDIETLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G D K+I A+ V + Q K + SL RR+ E+ A
Sbjct: 493 EISKRLGLDEKVINNARSYV---GADSSQVEK--MIASLESSRRQTEADLEEAN------ 541
Query: 576 MDLYREIEDEAKDLDRRA-AHLKAKET--QQVQQELNFAKVQIDTVVQDFENQLRDASAD 632
DL ++ E KDL ++ A + K++ ++ ++E + ++ +LR +
Sbjct: 542 -DLLKQAEKLHKDLQKQMIAFYEYKDSLYEKAEEEARAIAEKAKKEAEEIIRELRKMRIE 600
Query: 633 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV---- 688
+ ++ +KE E ++EA R ++ + E SS +F ++ HV GD++ +
Sbjct: 601 K-HAEVKEHE-----LIEAKRRLEE-AAPEKRASSSGNKFKDKKHVFRPGDEVKVLSFNQ 653
Query: 689 ----VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
VE D + LVQ G ++++V+++++ I NS + P ++
Sbjct: 654 KGHLVERISDSEW-LVQIGILKMKVEESDMEFI-NSPKPADTKPIATVK----------- 700
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTG 800
G S LDLRG R E+A +D AL R + +IHG GTG
Sbjct: 701 ---------GKDFHVSLE-LDLRGERYEDALLKVEKYIDNALLAGYPR--VSIIHGKGTG 748
Query: 801 VVKERVLEILRNHPRVAK--YEQESPMNYGCTVAYIK 835
+++ V E L NH V K + + G TV K
Sbjct: 749 ALRQGVQEYLNNHRAVKKIRFGEAGEGGTGVTVVEFK 785
>gi|431757245|ref|ZP_19545876.1| MutS2 protein [Enterococcus faecium E3083]
gi|430619534|gb|ELB56361.1| MutS2 protein [Enterococcus faecium E3083]
Length = 786
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 349/727 (48%), Gaps = 109/727 (14%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL--------VQYGKMRVRV 709
ET + + ++ + GD++ +V G T+L V+ G +++ V
Sbjct: 620 LHQEETLKKNKVLKKAKEQKILKPGDEV--LVTTYGQRGTLLRKNGNQWQVEIGILKMNV 677
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 678 SEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRGK 716
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 827
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 717 RYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APANQ 775
Query: 828 GCTVAYI 834
G A I
Sbjct: 776 GGNGATI 782
>gi|257892933|ref|ZP_05672586.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
gi|257829312|gb|EEV55919.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
Length = 786
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 214/727 (29%), Positives = 349/727 (48%), Gaps = 109/727 (14%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPVGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL--------VQYGKMRVRV 709
ET + + ++ + GD++ +V G T+L V+ G +++ V
Sbjct: 620 LHQEETLKKNKVLKKAKEQKILKPGDEV--LVTTYGQRGTLLRKNGNQWQVEIGILKMNV 677
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 678 SEDELMPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRGK 716
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 827
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 717 RYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APANQ 775
Query: 828 GCTVAYI 834
G A I
Sbjct: 776 GGNGATI 782
>gi|341820105|emb|CCC56337.1| mutS2 protein [Weissella thailandensis fsh4-2]
Length = 795
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 193/669 (28%), Positives = 322/669 (48%), Gaps = 73/669 (10%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P++T R R + +KA+++ G+ + S +G T ++EP V+ NN E
Sbjct: 188 PIVTIRNERYVLPVKATYRQKF-GGVVHDQSQTGQTLYIEPADVVDMNNRLREYYLKERQ 246
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
EE +L L+A++A I+ + +D A+A +A + + P S+++HV
Sbjct: 247 EEERVLIELSAKLAPEADNIENNAQVLGHLDFLNAKARYAVAIKAIEPEFSAENHVRLLK 306
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
+ +HPLL +P D VP DI +
Sbjct: 307 A------RHPLL---------------DP--------------------DKVVPNDITIG 325
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ +++TGPNTGGKT ++KTLGL +M+++G ++PA + + F I ADIGD QS+
Sbjct: 326 EDYSAIIVTGPNTGGKTITLKTLGLLQIMAQSGFFIPAAEYSSVGIFKEIFADIGDEQSI 385
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H+ I DIL + ++SLVL DE+G+GTDP EG ALA +IL + + +V
Sbjct: 386 EQSLSTFSAHMVNITDILAGMDKDSLVLFDELGAGTDPQEGAALAMAILDAVGETGAYSV 445
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY +L NA+ EF +++LRPTY+ L G G SNAL IAK +G II
Sbjct: 446 ATTHYPELKVYGYNRADTINASMEFDIDSLRPTYKFLMGIPGRSNALEIAKRLGLSDTII 505
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
A L +++ L+ R + +Q E L + E + +
Sbjct: 506 NSASALT-----SEDSQELNDMIADLVARRNAVLTQQVELTQKVVENRQLKNDYEAKLEA 560
Query: 589 LDRRAAHLKAKETQQVQQELNF----AKVQIDTVVQDFENQLRDASADEINSLIKESESA 644
+D++ +AK + ++E N A+ + D ++ D RD + + N L+ +++ A
Sbjct: 561 IDKQ----RAKTVEDAKKEANHIVADARRKTDKIIGDLHKMARDGATIKENKLM-DAKGA 615
Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
+ A+ E P ++ + + + P G+ V V+ G + V ++ D+ VQ G
Sbjct: 616 LNAMHEEPSPTNNRILRKAKKAKQVPLSVGDTVLVREYGQQGTIVRQL--KDNKFEVQMG 673
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
+++ + I + P PR K+++ + ++N +
Sbjct: 674 ILKMVLAGEEIE---KQDKAPTNEPKPRQNKRRKTSHVNTNKATNRAEAAA--------K 722
Query: 764 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 821
LDLRG+R E A +LD I A + S + +IHG GTG +++ V E LR+H ++ ++
Sbjct: 723 LDLRGIRYEPAMAELDRFIDQALLNNLSSVEIIHGKGTGAIRKGVQEYLRSHRQIESFKF 782
Query: 822 ESPMNYGCT 830
P + G T
Sbjct: 783 TGP-DQGAT 790
>gi|303228407|ref|ZP_07315240.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella atypica ACS-134-V-Col7a]
gi|302516909|gb|EFL58818.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella atypica ACS-134-V-Col7a]
Length = 792
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 209/738 (28%), Positives = 355/738 (48%), Gaps = 89/738 (12%)
Query: 98 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSL 152
PLL L +++ + +E+++ D K + LD AS L +R R R ++ ++
Sbjct: 112 PLLSLWMQDMPNMDRVEQRLKRVFDEKGEL-LDTASPKLASLRNTISKTRDRIKHDIQAI 170
Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
L Q + + +IT+R +R + +K ++ DG+ + S++G T ++EP
Sbjct: 171 LHDKDNQKY----FQEAIITQRNNRYVIPVKQEYRQYF-DGLIHDRSATGQTLYIEPMRL 225
Query: 213 VEFNNMEVRLSNSEIAEETAILSL---LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 269
V+ NN L + I EE +L + L+A I + ++ ++V I+ + +A A
Sbjct: 226 VQLNN---DLQEALIGEEQEVLRIYKELSALIKQHSNDLMDACEKVSHIEFVYGKAKLAI 282
Query: 270 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
V Q+ +S +N+ +HPL+ +++
Sbjct: 283 AQKAV------QATLSEGRDVNLMRARHPLIPANTV------------------------ 312
Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
VP DI++ + R+++ITG NTGGKT S+KTLGL SLM+++GL++PA +
Sbjct: 313 -----------VPTDIRLGTDYRILLITGSNTGGKTVSLKTLGLLSLMNQSGLFIPADHG 361
Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
LP F I ADIGD QS+E +LSTFS H+++++ I++ LVL+DE+GSGTDP EG
Sbjct: 362 SILPIFHNIFADIGDEQSIEASLSTFSAHMTQVISIIKHCGPNDLVLLDELGSGTDPEEG 421
Query: 450 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
ALA SIL++ R + L +V+THY +L EN EF TL+PTYR+ G
Sbjct: 422 SALAVSILEFFRQKGTLMMVSTHYNELKNYAYHTAGIENGHVEFDERTLKPTYRLHIGVA 481
Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 569
G S+AL+IA +G + I+ RA R + + SE+ L + +L +
Sbjct: 482 GSSHALSIAARLGLPKDIVNRA-------RDYKSKFGSSEMENVLTDLNEQLRKSSERER 534
Query: 570 SLHAEIMDLYR---EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 626
+L E+ + R ++E E K + + + AK + +V+ + +++ + Q
Sbjct: 535 ALKKELDETRRMRGQLEREKKQFNEKRKQMLAKAQADAESMKRSLRVEGEAIIKQLKAQF 594
Query: 627 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 686
+ + D+ S I + I+ + H P+ + S G+ V+V SL L
Sbjct: 595 SETNKDKRLSAINAARKGISNV---HVPEAPVNDDRKTLSIDAVAIGQVVYVTSL-RSLG 650
Query: 687 TVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
TV+ + G+ TV + V+V ++ R N +++ P+ RK R GSA
Sbjct: 651 TVLSIKGNRVTVDINGLSATVKVNELQSTTREESNKIQRDNLKAQPKTRK----RAGGSA 706
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVV 802
+E + +++ G V+EA + I A + + +IHG GTG +
Sbjct: 707 VQRQKEV---------RTEINILGQTVDEAVVSVGRFIDQALLGGINQVRIIHGKGTGAL 757
Query: 803 KERVLEILRNHPRVAKYE 820
+E V + LR P+VA +E
Sbjct: 758 REGVHQYLRTLPQVAHFE 775
>gi|153815454|ref|ZP_01968122.1| hypothetical protein RUMTOR_01689 [Ruminococcus torques ATCC 27756]
gi|145847096|gb|EDK24014.1| MutS2 family protein [Ruminococcus torques ATCC 27756]
Length = 791
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 244/836 (29%), Positives = 386/836 (46%), Gaps = 140/836 (16%)
Query: 5 VVQKAQIPFGKS--LEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSP 62
+++K +I FG + +EES K L +I G LN+A +LL
Sbjct: 57 IIKKGRISFGDAAPVEESLKRL---------------------EIGGALNTA---ELL-- 90
Query: 63 SEIC-AVRRTLRAV----NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
IC + T RA ++ + L + ++ D L+ +PL ++ C ++E E
Sbjct: 91 -RICRLLSNTARAKSYGRHDTQEDLADCLDIYFDGLEPLTPLSNEIERC-IISEDE---- 144
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAG---GIDKPLITKR 174
I D AS L+ IR R++ NL+ + + + + LIT R
Sbjct: 145 ---------ISDDASSALKHIR----RSINNLNDRVHTTLSGLVNGSLRTYLQDALITMR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R C+ +KA ++ + G+ + S+SG+T F+EP V+ NN L E E IL
Sbjct: 192 GDRYCIPVKAEYRSQV-QGLIHDQSASGSTLFIEPMAIVKLNNDLKELYVQEQDEIRKIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E A+ EI+ + ++D FAR A M PIL+ + I I
Sbjct: 251 ASLSEEAAQYIEEIRTDYRSLTDLDFIFARGALALTMRASRPILNEEGR------IRIRE 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPLL + VPI + + E ++
Sbjct: 305 GRHPLLDQKKV-----------------------------------VPITVSLGDEFSLL 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
+ITGPNTGGKT S+KT+GL +LM +AGL++PA + + F + ADIGD QS+EQ+LST
Sbjct: 330 IITGPNTGGKTVSLKTVGLLTLMGQAGLHIPAGDRSEIAVFRQVYADIGDEQSIEQSLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R + TTHY+
Sbjct: 390 FSSHMTNIVSFLKKVDDRSLVLFDELGAGTDPTEGAALAIAILSHLHKRNIRTMATTHYS 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L ENA EF +E+LRPTYR+L G G SNA I+ +G II A+K
Sbjct: 450 ELKIYALSTPGVENACCEFDVESLRPTYRLLIGIPGKSNAFAISGKLGLPGYIIDDAKK- 508
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
R Q +L L RR +E + A+ E L R+ + + L+ +
Sbjct: 509 ----RLSEQDVSFEDLLSDLEASRRTIEKEQAEIAAYKKEAETLKRQAVQKQEKLEEQRD 564
Query: 595 HLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESE--------SAI 645
+ + ++ L AK D +++F + + SA E+ KE E ++
Sbjct: 565 RIIREANEKANAILREAKEVADETLRNFHKFGKENISAAEME---KERERLRKKIKDTSA 621
Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
+A ++ ++P + S+ + GE V V S+ + T+ +P V VQ G +
Sbjct: 622 SASLKTNKPKKTYKPSDF-------KLGESVKVLSM-NLTGTIGSLPDARGNVTVQMGIL 673
Query: 706 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 765
R +V +++ I + + AP+ + +R + S ++ S P + +
Sbjct: 674 RSQVNISDLEII-----EEVSPYAPK----RMNRTAKSKIKMSKSLSVSPEI-------N 717
Query: 766 LRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
L G V+EA +LD L A + + V+HG GTG +++ + E LR V Y
Sbjct: 718 LLGKTVDEAVAELDKYLDDALLSHLNSVRVVHGKGTGALRKGIHEYLRRQKHVKSY 773
>gi|331092295|ref|ZP_08341123.1| hypothetical protein HMPREF9477_01766 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401727|gb|EGG81306.1| hypothetical protein HMPREF9477_01766 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 791
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 212/698 (30%), Positives = 327/698 (46%), Gaps = 74/698 (10%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS L+ IR + E + S L + + ++ + LIT R R C+ +KA +
Sbjct: 145 ISDDASSTLKHIRRSIQLLNERVHSTLTSLVSGSLKSY-LQDSLITMRGDRYCIPVKAEY 203
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ +P G+ + SS+G+T F+EP V+ NN L E E ILS L+ E +
Sbjct: 204 RSQVP-GMIHDQSSTGSTLFIEPMAIVKLNNDLKELYGKEQEEIQVILSRLSEEAGGYIQ 262
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
E++ + E+D FA+ A M+ PI +++ + I+I +HPLL +
Sbjct: 263 ELRTNFAILTELDFIFAKGMLALSMNAGKPIFNTKGY------IHIREGRHPLLDKKKV- 315
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
VPI + + + ++++TGPNTGGKT
Sbjct: 316 ----------------------------------VPITLTLGGDFDLLIVTGPNTGGKTV 341
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
S+KT+GL +LM +AGL++PA + L F + ADIGD QS+EQ+LSTFS H++ IV L
Sbjct: 342 SLKTVGLFTLMGQAGLHIPALDRSELAVFHEVYADIGDEQSIEQSLSTFSSHMTNIVSFL 401
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ V SLVL DE+G+GTDP+EG ALAT+IL +L R + TTHY++L
Sbjct: 402 KDVDEHSLVLFDELGAGTDPTEGAALATAILSHLHQRGIRTMATTHYSELKIFALSTEGV 461
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
ENA EF +ETLRPTYR+L G G SNA I+ +G II A++ + +H
Sbjct: 462 ENACCEFDVETLRPTYRLLLGIPGKSNAFAISGKLGLPDYIIDEAKR-------QLSEHD 514
Query: 547 KS--ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
+S +L L E R+ +E + AS EI L +E + LD + + + ++
Sbjct: 515 ESFEDLLSDLEESRKTIEKERAEIASYKQEIQQLKSRVEKKQVRLDEQKERILREANEKA 574
Query: 605 QQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
L AK D +++F + + S E+ + I+ E +
Sbjct: 575 NAILRDAKEVADETMKNFRKFGKENISVAEMERERERLRQKISKTQEKSSIQPKKPKKQH 634
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
F + GE V V S+ + TV +P + VQ G +R +V +++ I
Sbjct: 635 KPGDF--KLGESVKVLSM-NLTGTVSSLPDAKGNLFVQMGILRSQVNISDLEIIE----- 686
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL- 782
P KQ SG S + S P + +L G V+EA +LD L
Sbjct: 687 ---EPMTITAKQMRRTSSGKMKMS-KSLSVSPEI-------NLLGKTVDEAIAELDKYLD 735
Query: 783 -ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
A + + ++HG GTG +++ + L+ V Y
Sbjct: 736 DAYLAHLTPVRIVHGKGTGALRQGIHNYLKRLKYVKSY 773
>gi|377556922|ref|ZP_09786596.1| DNA mismatch repair protein MutS2 [Lactobacillus gastricus PS3]
gi|376166998|gb|EHS85865.1| DNA mismatch repair protein MutS2 [Lactobacillus gastricus PS3]
Length = 789
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 216/715 (30%), Positives = 335/715 (46%), Gaps = 147/715 (20%)
Query: 162 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 221
QA + P+IT R R + + A ++ G+ + S+SG T ++EP VE NN +
Sbjct: 180 QAKKLSDPIITIRNDRYVIPVLAQYRNQF-GGVVHDQSASGQTLYIEPGSVVELNNRLRQ 238
Query: 222 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 281
E+ E +L L+ I + EI + +DL A+A A M PI++ Q
Sbjct: 239 AQIEEVQEMRRVLIELSDLIRPYQDEIAQNEAILGHLDLINAKAKLAAQMKASLPIVNDQ 298
Query: 282 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
+N+ +HPL+ P V N
Sbjct: 299 L------VVNLRQARHPLI----------------PQDQVVAN----------------- 319
Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
DI++ + + +VITGPNTGGKT ++KTLG+ LM+++G+++PA + ++ FD + AD
Sbjct: 320 --DIQLGKDYQALVITGPNTGGKTITLKTLGIIQLMAQSGMFIPANENSQVTVFDNVFAD 377
Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
IGD QSLEQNLSTFSGH+ + ILE ++ SL+L+DE+G+GTDP EG ALA +IL +
Sbjct: 378 IGDEQSLEQNLSTFSGHMENVKTILEQMTDHSLILLDELGAGTDPKEGAALAMAILDAIG 437
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
+VTTHY +L NA+ EF TL+PTYR+L G G SN + IA +
Sbjct: 438 TCGARVMVTTHYPELKVYAYDRQATINASMEFDQATLQPTYRLLIGIPGQSNGIAIANRL 497
Query: 522 GFDRKIIQRAQKLVER-----------LRPERQQHR----------------KSELYQSL 554
G D IIQ AQ LV+ L +R+Q R ++EL Q L
Sbjct: 498 GLDPGIIQTAQSLVQADSQDLNQMIGDLVEQRKQAREENARLVELREANEAKEAELTQKL 557
Query: 555 M---EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ----VQQE 607
E+R +L +AR+ A+ E+ K D+ HL+ + QQ + E
Sbjct: 558 TRFDEQRDRLYDEARSKAN---------HEVAQAKKQADKIIHHLRQLQVQQGANVKEHE 608
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSS 667
L AK Q++ + QD NS+++ +++ +A +P
Sbjct: 609 LINAKGQLNALHQDNPRLAH-------NSVLRRAKAK-----QALKP------------- 643
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
G+ V VKS G + T+V G VQ G +++ + + ++ + + K
Sbjct: 644 -----GDTVQVKSYGQQ-GTLVAKRGRHQWE-VQLGILKMAIDEADLTKVAAGQIK---T 693
Query: 728 PAPRLRKQQ----EDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IA 781
AP+ RK+ + RQ+ + LDLRG R E+A +LD I
Sbjct: 694 DAPKARKRPVRTIQTRQTAA-------------------RLDLRGKRYEQAMSELDAFID 734
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY--GCTVAYI 834
A + + + ++HG GTG +++ E LR++PRV +E +P N G T+A+
Sbjct: 735 HALLNNLTSVTIVHGKGTGALRKGTQEYLRSNPRVKSFEFATPNNGGDGATIAFF 789
>gi|423512651|ref|ZP_17489182.1| MutS2 protein [Bacillus cereus HuA2-1]
gi|402447575|gb|EJV79425.1| MutS2 protein [Bacillus cereus HuA2-1]
Length = 786
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 232/796 (29%), Positives = 377/796 (47%), Gaps = 109/796 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546
Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ L+RE++ + + + K ++ ++++ AK + + ++ + QLR A +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNV 605
Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
+ LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFGQKG 656
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLKKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 804 ERVLEILRNHPRVAKY 819
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKTY 768
>gi|401680135|ref|ZP_10812059.1| MutS2 family protein [Veillonella sp. ACP1]
gi|400219262|gb|EJO50133.1| MutS2 family protein [Veillonella sp. ACP1]
Length = 792
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 233/821 (28%), Positives = 390/821 (47%), Gaps = 102/821 (12%)
Query: 18 EESQKLLNQTSAALAMMQS---QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
E+ Q+ L++T+ AL Q+ QPL DI + +LS I V T+ A
Sbjct: 39 EKIQEALDETAEALRSWQTEIEQPL--GGTRDIRESCKKSRKDFVLSREAIWDVYITIGA 96
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
+K++ A+ Y PLL L +++ + +E+++ D K + LD AS
Sbjct: 97 ----YKRM---AKFFRAKYMEY-PLLSLWMQDMPNMDRVEQRLKRVFDEKGEL-LDTASP 147
Query: 134 DLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L +R R R ++ ++L Q + + +IT+R +R + +K ++
Sbjct: 148 KLASLRNTISKTRDRIKHDIQAILHDKDNQKY----FQEAIITQRNNRYVIPVKQEYRQY 203
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAKSER 246
DG+ + S++G T ++EP V+ NN L + I EE +L + L+A I +
Sbjct: 204 F-DGLIHDRSATGQTLYIEPMRLVQLNN---DLQEALIGEEQEVLRIYKELSALIKQHSN 259
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
++ ++V I+ + +A A V Q+ +S +N+ +HPL+ +++
Sbjct: 260 DLMDACEKVSHIEFVYGKAKLAIAQKAV------QATLSEGRDVNLMRARHPLIPANTV- 312
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
VP DI++ + R+++ITG NTGGKT
Sbjct: 313 ----------------------------------VPTDIRLGTDYRILLITGSNTGGKTV 338
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
S+KTLGL SLM+++GL++PA + LP F I ADIGD QS+E +LSTFS H+++++ I+
Sbjct: 339 SLKTLGLLSLMNQSGLFIPADHGSILPIFHNIFADIGDEQSIEASLSTFSAHMTQVISII 398
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ LVL+DE+GSGTDP EG ALA SIL++ R + L +V+THY +L
Sbjct: 399 KHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRQKGTLMMVSTHYNELKNYAYHTAGI 458
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
EN EF TL+PTYR+ G G S+AL+IA +G + I+ RA R + +
Sbjct: 459 ENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVNRA-------RDYKSKFG 511
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYR---EIEDEAKDLDRRAAHLKAKETQQ 603
SE+ L + +L + +L E+ + R ++E E K + + + AK
Sbjct: 512 SSEMENVLTDLNEQLRKSSERERALKKELDETRRMRGQLEREKKQFNEKRKQMLAKAQAD 571
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ +V+ + +++ + Q + + D+ S I + I+ + H PD +
Sbjct: 572 AESMKRSLRVEGEAIIKQLKAQFSETNKDKRQSAINAARKDISNV---HVPDAPIDDNRK 628
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSK 721
+ G+ V+V SL L TV+ + G+ TV + V+V ++ R N
Sbjct: 629 ELTIDAVAIGQVVYVTSL-RSLGTVLSIKGNRVTVDINGLSATVKVNDLQSTTREESNKI 687
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 779
+++ P+ RK + GSA +E V+T N L G V+EA +
Sbjct: 688 QRDNLKAQPKTRK----KAGGSAVQRQKE------VRTEINIL---GQTVDEAVVSVGRF 734
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
I A + + +IHG GTG ++E V + LR P+VA +E
Sbjct: 735 IDQALLGGINQVRIIHGKGTGALREGVHQYLRTLPQVAHFE 775
>gi|431741156|ref|ZP_19530063.1| MutS2 protein [Enterococcus faecium E2039]
gi|430602267|gb|ELB39845.1| MutS2 protein [Enterococcus faecium E2039]
Length = 786
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 215/728 (29%), Positives = 349/728 (47%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKELKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ D E VP DI + + + +VITGP
Sbjct: 311 I--------------------DQEKV---------------VPNDIAIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D +I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTDVINEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHHDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEIEKAKKKA----NEVVSEAEKKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVVHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+ H V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKKHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|229062235|ref|ZP_04199557.1| hypothetical protein bcere0026_43060 [Bacillus cereus AH603]
gi|228717063|gb|EEL68742.1| hypothetical protein bcere0026_43060 [Bacillus cereus AH603]
Length = 786
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 232/796 (29%), Positives = 377/796 (47%), Gaps = 109/796 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546
Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ L+RE++ + + + K ++ ++++ AK + + ++ + QLR A +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNV 605
Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
+ LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRSGDEVKVLTFGQKG 656
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLEKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 804 ERVLEILRNHPRVAKY 819
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKTY 768
>gi|418961600|ref|ZP_13513485.1| DNA mismatch repair protein [Lactobacillus salivarius SMXD51]
gi|380343695|gb|EIA32043.1| DNA mismatch repair protein [Lactobacillus salivarius SMXD51]
Length = 786
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 238/820 (29%), Positives = 380/820 (46%), Gaps = 142/820 (17%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI G LNS E+ A+ R LRA N V + + A D+ + L + +
Sbjct: 79 DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIF 161
L E+ +K+ I+ + D AS L+ IR + + E L+S + ++
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNSYTRGTNSKY- 183
Query: 162 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 221
+ ++T R R + +K ++ GI + SSSG T F+EP VE NN R
Sbjct: 184 ----LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---R 235
Query: 222 LSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L ++AE IL L+ E+A E+ + +D A+A +A + PIL
Sbjct: 236 LRQQQVAEREEINRILEELSEELAPYTHELNNNAKILGMLDFTNAKAKYAHSIKATEPIL 295
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
S ++ V + + HPLL +K V+N
Sbjct: 296 SKENDVY------LRQVWHPLL----------------DMKKAVKN-------------- 319
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
DI + + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ F I
Sbjct: 320 -----DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNI 374
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL
Sbjct: 375 FADIGDEQSIEQSLSTFSSHMTNIVEILKDIDEKSLVLFDELGAGTDPQEGAALAISILD 434
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
+ + V TTHY +L + NA+ EF + TL+PTYR+L G G SNA +I+
Sbjct: 435 AVGAKGSYVVATTHYPELKAYGFERPNTINASMEFDVNTLQPTYRLLIGIPGRSNAFDIS 494
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASL 571
+ +G D+ I+ A++L + +E+ L+ +R E + R A L
Sbjct: 495 QRLGLDKMIVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEEL 549
Query: 572 HAEIMDLYREIEDEAKDLDRRA---AHLKAKETQQVQQEL--NFAKVQIDTVVQDFENQL 626
H ++ + + E + +++ +A A+ +ET++ EL K+++ V E L
Sbjct: 550 HHDLEANFHQFERQKENMLEQAKEKANQIVEETKKKSDELISELRKMKMSAVSNIEEKNL 609
Query: 627 RDASADEINSLIKESESAIAAIV-------EAHRPDDDFSVSETNTSSFTPQFGEQVHVK 679
DA +N+L +E+ ++ E H P+DD V V
Sbjct: 610 IDAQG-RVNALHQETNLKKNKVLRKAKKQQELH-PNDD------------------VMVN 649
Query: 680 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 739
S G + V+ + VQ G +++++ ++++ I K + +
Sbjct: 650 SYGQR--GVLLRKAGNHAWEVQLGILKMKIDESDLEKIK--------------VKDTQPK 693
Query: 740 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGM 797
++G+ S+ + P +LDLRG R E A ++D I A + + +IHG
Sbjct: 694 RAGTVLKSSSSSHVSP-------TLDLRGERYENAMVKVDRYIDAAVLAGYNSVTIIHGK 746
Query: 798 GTGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 835
GTG ++ ++ L+ + V +E SP N G TV Y K
Sbjct: 747 GTGALRTGIINYLKQNKAVKNFEFASPNNGGNGATVVYFK 786
>gi|148658104|ref|YP_001278309.1| MutS2 family protein [Roseiflexus sp. RS-1]
gi|148570214|gb|ABQ92359.1| MutS2 family protein [Roseiflexus sp. RS-1]
Length = 828
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 246/870 (28%), Positives = 394/870 (45%), Gaps = 142/870 (16%)
Query: 19 ESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E ++ L T A ++ + P + + D+ + A G + P + + TL +
Sbjct: 44 EVRRRLRLTDEARRLLDAMPDVSIGGARDVRPAVGLARRGGVCDPEALIEIAATLASARR 103
Query: 78 VWKKLTEAAELDGDSLQRYSPLL-ELLKNCNFLTELEEKIGFCI--DCKLLIILDRASED 134
+ L + LD S PLL E + L E+E+ + I D + +LD AS
Sbjct: 104 LRATLRK---LDAASF----PLLHETAVDLPLLPEVEDAVARAIGEDGQ---VLDSASPK 153
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGI-DKPLITKRRSRMCVGIKASHKYLLPDG 193
L +R+E + L L + I G + +P+IT R R V +KA+H+ + G
Sbjct: 154 LARLRSEVRTAFNRLQEKLHNL---IMTHGDVLQEPIITVRNGRYVVPVKATHRRAI-RG 209
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
+ + S+SGAT ++EP VE NN L +E AE IL+ L+A + I ++
Sbjct: 210 LVHDQSASGATLYIEPLTIVELNNAWRELQLAEQAEVERILAELSALVGDHAGAITAGVE 269
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ +DLAFA A +A M V P + + + + +HPLL
Sbjct: 270 ALATLDLAFAMAQYAAAMRCVMPEIVDPPLPPDEPLLLLTAARHPLL------------- 316
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P K VPID+++ R+++ITGPNTGGKT ++KT GL
Sbjct: 317 --DPQKV--------------------VPIDMRLGGRFRLLLITGPNTGGKTVALKTTGL 354
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE------ 427
+LM++AG+++PA RLP F I ADIGD QS+EQ+LSTFS H++ I+ IL
Sbjct: 355 LALMAQAGMHIPASQPSRLPVFAQIFADIGDEQSIEQSLSTFSSHMTNIIRILRALEDAP 414
Query: 428 ----------------------LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
L +LVL+DE+G+GTDP EG ALA +I++ L +
Sbjct: 415 DVAPAETSVSGSTQTMPPDTQRLGRMPALVLLDELGAGTDPVEGAALARAIIERLLELGV 474
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
L V TTHYA+L ENA+ EF +ETL PTY++ G G SNAL IA +G
Sbjct: 475 LGVATTHYAELKAFAYATPGVENASVEFDVETLAPTYKLTIGLPGRSNALAIAARLGLAP 534
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
+++RA+ + R+ + +L + ER ++ + A + A D
Sbjct: 535 DLVERARATM-----AREDVQVEDLLAGIHRERDAAAAELQRAMEVRA----------DA 579
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ---LRDAS---------ADE 633
K DR AA L+A E Q+ + A+ I+ ++ N+ LRD S +E
Sbjct: 580 EKYRDRLAAELRAFEEQR-DEAWQAAREAIEAELRQVRNEVRRLRDESRSVAASRRWLEE 638
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
++E+ +++ A V +P + + + P G+ V V+S+G ++ +
Sbjct: 639 AERRLQEARASLPA-VPPGKPAGHPAPAAEQVARLQP--GDVVRVRSVG-LTGEILSINE 694
Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 753
+D T VQ G R++ + +E R +G+ G +Y
Sbjct: 695 EDQTAEVQVGGFRMQADLAEL--------------------TREKRAAGNGGGQPARPAY 734
Query: 754 ---GPRVQTSKN---SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKER 805
G + ++ LD+RG R + +LD L A + +IHG GTG +++
Sbjct: 735 ESRGTSLPAPRDVSLELDMRGWRAADVGERLDRYLNDAYLAGLPWVRIIHGKGTGALRQA 794
Query: 806 VLEILRNHPRVAKYEQESPMNYGCTVAYIK 835
V + L++H VA + S G V ++
Sbjct: 795 VRDTLKDHKLVASFSSASATEGGEGVTIVR 824
>gi|423519234|ref|ZP_17495715.1| MutS2 protein [Bacillus cereus HuA2-4]
gi|401159591|gb|EJQ66974.1| MutS2 protein [Bacillus cereus HuA2-4]
Length = 786
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 232/796 (29%), Positives = 377/796 (47%), Gaps = 109/796 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPHELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDSGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
A + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAPKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNRDQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546
Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ L+RE++ + + + K ++ ++++ AK + + ++Q+ QLR A +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKQEAEGIIQEL-RQLRKAQLINV 605
Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTPQ----FGEQVHVKSLGDKL 685
+ LI+ E A +V+ + N + P+ G++V V + G K
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK---------VNVKNTAPKQQLRAGDEVKVLTFGQKG 656
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
+ +V D VQ G ++++VK++N+ I KQ E + S
Sbjct: 657 QLLKKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVK 701
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+ S LDLRG R E+A +++ L A S + +IHG GTG ++
Sbjct: 702 GRDYHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALR 752
Query: 804 ERVLEILRNHPRVAKY 819
+ V + L+ H V Y
Sbjct: 753 QGVQDYLKKHRGVKTY 768
>gi|196250214|ref|ZP_03148908.1| MutS2 family protein [Geobacillus sp. G11MC16]
gi|196210398|gb|EDY05163.1| MutS2 family protein [Geobacillus sp. G11MC16]
Length = 641
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 199/618 (32%), Positives = 307/618 (49%), Gaps = 69/618 (11%)
Query: 17 LEESQKLLNQTSAALAMMQSQ---PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
L+E L +T A A+++ + PLD + DI L A G +LSP E+ V T
Sbjct: 40 LDEVAVWLEETDEAAAVLRLRGYVPLD--GVVDIRSHLKRAAIGGVLSPIELLEVAATA- 96
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
A + K+L + + L R + + L + LEE I ID + LD AS+
Sbjct: 97 AASRQMKQLIMSLHDEHGGLARLADYADELAE---VPALEEDIRRSIDDHGEV-LDTASD 152
Query: 134 DLE----LIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IRA R E L+S+++ +AQ + +IT R R + +K ++
Sbjct: 153 RLRSLRGQIRAAEARIREKLESIIRSPSAQ----KRLSDAIITIRNDRYVIPVKQEYRSA 208
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S+SGAT F+EP+ VE NN E E IL L+A++A+ + +K
Sbjct: 209 Y-GGIVHDQSASGATLFIEPQVVVELNNALREARAKEKQEIERILRELSAKVAEHDEPLK 267
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
++ + D FA+A +A+ + P ++++ ++ F + +HPL+
Sbjct: 268 RAVEALAHFDFLFAKAKYARRLQAAKPAVNNRGYLRFLQA------RHPLI--------- 312
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
D VP DI + + +VITGPNTGGKT ++K
Sbjct: 313 --------------------------DQDKAVPNDIVLGGDYTTIVITGPNTGGKTVTLK 346
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL ++M++AGL++PA + F + ADIGD QS+EQ+LSTFS H+ IVDIL V
Sbjct: 347 TVGLLTIMAQAGLFIPAADGSEAAVFRSVFADIGDEQSIEQSLSTFSSHMVNIVDILRHV 406
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENA 489
ESLVL DE+G+GTDP EG ALA +IL + R V TTHY +L NA
Sbjct: 407 DEESLVLFDELGAGTDPQEGAALAIAILDEVHGRGARTVATTHYPELKAYGYNRPGVVNA 466
Query: 490 ATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSE 549
+ EF ETLRPTY++L G G SNA +I++ +G D +II+RA +++ + H
Sbjct: 467 SVEFDTETLRPTYKLLIGIPGRSNAFDISRRLGLDERIIERA-----KVQVSAESHSVEN 521
Query: 550 LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
+ SL +++ E A S E L E E + ++L+ + A A+ Q+ +
Sbjct: 522 MIASLERSKKQAEEDEARAHSAREEAERLRAEWEQKLEELEDKKAEQLAEAAQKATDIIR 581
Query: 610 FAKVQIDTVVQDFENQLR 627
A+ + + ++ N+LR
Sbjct: 582 AAEREAERII----NELR 595
>gi|303230741|ref|ZP_07317488.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella atypica ACS-049-V-Sch6]
gi|302514501|gb|EFL56496.1| putative recombination and DNA strand exchange inhibitor protein
[Veillonella atypica ACS-049-V-Sch6]
Length = 792
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 208/738 (28%), Positives = 356/738 (48%), Gaps = 89/738 (12%)
Query: 98 PLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIR----AERKRNMENLDSL 152
PLL L +++ + +E+++ D K + LD AS L +R R R ++ ++
Sbjct: 112 PLLSLWMQDMPNMDRVEQRLKRVFDEKGEL-LDTASPKLASLRNTISKTRDRIKHDIQAI 170
Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
L Q + + +IT+R +R + +K ++ DG+ + S++G T ++EP
Sbjct: 171 LHDKDNQKY----FQEAIITQRNNRYVIPVKQEYRQYF-DGLIHDRSATGQTLYIEPMRL 225
Query: 213 VEFNNMEVRLSNSEIAEETAILSL---LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 269
VE NN L + I EE +L + L+A I + ++ ++V I+ + +A A
Sbjct: 226 VELNN---DLQEALIGEEQEVLRIYKELSALIKQHSNDLMDACEKVSHIEFVYGKAKLAI 282
Query: 270 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
V Q+ +S +N+ +HPL+ +++
Sbjct: 283 AQKAV------QATLSEGRDVNLMRARHPLIPANTV------------------------ 312
Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
VP DI++ + R+++ITG NTGGKT S+KTLGL SLM+++GL++PA++
Sbjct: 313 -----------VPTDIRLGTDYRILLITGSNTGGKTVSLKTLGLLSLMNQSGLFIPAEHG 361
Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
LP F I ADIGD QS+E +LSTFS H+++++ I++ LVL+DE+GSGTDP EG
Sbjct: 362 SILPIFHNIFADIGDEQSIEASLSTFSAHMTQVISIIKHCGPNDLVLLDELGSGTDPEEG 421
Query: 450 VALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGST 509
ALA SIL++ R + L +V+THY +L EN EF TL+PTYR+ G
Sbjct: 422 SALAVSILEFFRQKGTLMMVSTHYNELKNYAYHTAGIENGHVEFDERTLKPTYRLHIGVA 481
Query: 510 GDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAA 569
G S+AL+IA +G + I+ RA R + + SE+ L + +L +
Sbjct: 482 GSSHALSIAARLGLPKDIVNRA-------RDYKSKFGSSEMENVLTDLNEQLRKSSERER 534
Query: 570 SLHAEIMDLYR---EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 626
+L E+ + R ++E E K + + + AK + +V+ + +++ + Q
Sbjct: 535 ALKKELDETRRMRGQLEREKKQFNEKRKQMLAKAQADAESMKRSLRVEGEAIIKQLKAQF 594
Query: 627 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 686
+ + D+ S I + I+ + H P+ + S G+ V+V SL L
Sbjct: 595 SETNKDKRLSAINAARKGISNV---HVPEAPVNDDRKTLSIDAVAIGQVVYVTSL-RSLG 650
Query: 687 TVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
TV+ + G+ TV + V+V ++ R N +++ P+ RK + G+A
Sbjct: 651 TVLSIKGNRVTVDINGLSATVKVNELQSTTREESNKIQRDNLKAQPKTRK----KAGGTA 706
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVV 802
+E + +++ G V+EA + I A + + +IHG GTG +
Sbjct: 707 VQRQKEV---------RTEINILGQTVDEAVVSVGRFIDQALLGGINQVRIIHGKGTGAL 757
Query: 803 KERVLEILRNHPRVAKYE 820
+E V + LR P+VA +E
Sbjct: 758 REGVHQYLRTLPQVAHFE 775
>gi|429759588|ref|ZP_19292086.1| MutS2 family protein [Veillonella atypica KON]
gi|429179549|gb|EKY20796.1| MutS2 family protein [Veillonella atypica KON]
Length = 792
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 229/823 (27%), Positives = 388/823 (47%), Gaps = 102/823 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQS---QPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL 72
S E+ Q+ L++T+ AL Q+ QPL DI + +LS I V T+
Sbjct: 37 SREKIQEALDETAEALRSWQTEIEQPL--GGTRDIRESCKKSRKDFVLSREAIWDVYITI 94
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLIILDRA 131
A + K A ++ PLL L +++ + +E+++ D K + LD A
Sbjct: 95 GAYKRMVK-FFRAKYME-------YPLLSLWMQDMPNMDRVEQRLKRVFDEKGEL-LDTA 145
Query: 132 SEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHK 187
S L +R R R ++ ++L Q + + +IT+R +R + +K ++
Sbjct: 146 SPKLASLRNTISKTRDRIKHDIQAILHDKDNQKY----FQEAIITQRNNRYVIPVKQEYR 201
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL---LTAEIAKS 244
DG+ + S++G T ++EP VE NN L + I EE +L + L+A I +
Sbjct: 202 QYF-DGLIHDRSATGQTLYIEPMRLVELNN---DLQEALIGEEQEVLRIYKELSALIKQH 257
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
++ ++V I+ + +A A V Q+ +S +N+ +HPL+ ++
Sbjct: 258 SNDLMDACEKVSHIEFVYGKAKLAIAQKAV------QATLSEGRDVNLMRARHPLIPANT 311
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
+ P DI++ + R+++ITG NTGGK
Sbjct: 312 V-----------------------------------APTDIRLGTDYRILLITGSNTGGK 336
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T S+KTLGL SLM+++GL++PA++ LP F I ADIGD QS+E +LSTFS H+++++
Sbjct: 337 TVSLKTLGLLSLMNQSGLFIPAEHGSILPIFHNIFADIGDEQSIEASLSTFSAHMTQVIS 396
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
I++ LVL+DE+GSGTDP EG ALA SIL++ R + L +V+THY +L
Sbjct: 397 IIKHCGPNDLVLLDELGSGTDPEEGSALAVSILEFFRQKGTLMMVSTHYNELKNYAYHTA 456
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
EN EF TL+PTYR+ G G S+AL+IA +G + I+ RA R + +
Sbjct: 457 GIENGHVEFDERTLKPTYRLHIGVAGSSHALSIAARLGLPKDIVNRA-------RDYKSK 509
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYR---EIEDEAKDLDRRAAHLKAKET 601
SE+ L + +L + +L E+ + R ++E E K + + + AK
Sbjct: 510 FGSSEMENVLTDLNEQLRKSSERERALKKELDETRRMRGQLEREKKQFNEKRKQMLAKAQ 569
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
+ +V+ + +++ + Q + + D+ S I + I+ + H P+ +
Sbjct: 570 DDAESMKRSLRVEGEAIIKQLKAQFSETNKDKRLSAINAARKGISNV---HVPEAPVNDD 626
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK--KNNIRPIPN 719
S G+ V+V SL L TV+ + G+ TV + V+V ++ R N
Sbjct: 627 RKTLSIDAVAIGQVVYVTSL-RSLGTVLSIKGNRVTVDINGLSATVKVNELQSTTREESN 685
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
+++ P+ RK + GSA +E + +++ G V+EA +
Sbjct: 686 KIQRDNLKAQPKTRK----KAGGSAVQRQKEV---------RTEINILGQTVDEAVVSVG 732
Query: 780 --IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
I A + + +IHG GTG ++E V + LR P+VA +E
Sbjct: 733 RFIDQALLGGINQVRIIHGKGTGALREGVHQYLRTLPQVAHFE 775
>gi|340751175|ref|ZP_08687998.1| MutS2 protein [Fusobacterium mortiferum ATCC 9817]
gi|340562266|gb|EEO36747.2| MutS2 protein [Fusobacterium mortiferum ATCC 9817]
Length = 778
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 223/767 (29%), Positives = 373/767 (48%), Gaps = 118/767 (15%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
+ L +Y L + + + +E+ I ID I D AS DL IR +K N+
Sbjct: 108 EDLGKYRDLKDRYHDVPVMRGIEDIINKAIDNNKEI-KDDASLDLRDIRIHKKTLSMNIK 166
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
++ + A + +IT+R R V +KA K L+ GI + SSSG T F+EP
Sbjct: 167 RKFDELFDEPSFAKAFQERIITERDGRSVVPVKADFKGLIK-GIEHDRSSSGQTVFIEPL 225
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V NN L E E IL +T + + +I + + +L +D+ ARA +
Sbjct: 226 SIVALNNKMRELELKEKEEIRKILLRITEHVRNNREDIDAVGEAILSLDILNARAVYGIE 285
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
+ V P ++++ +S + +HP + P
Sbjct: 286 KNCVIPNINNREMLSLVDA------RHPFI----------------P------------- 310
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
+D VP+ ++ + ++ITGPNTGGKT ++KT GL +LM+ +G+ +PA H
Sbjct: 311 ------ADKIVPLTFEIGKDYNTLLITGPNTGGKTVALKTAGLLTLMALSGIPIPAHEHT 364
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
+ +F + ADIGD QS+EQ+LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG
Sbjct: 365 SIGFFTGVYADIGDEQSIEQSLSSFSAHLKNVQEILESVNKSSLVLLDELGSGTDPIEGS 424
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
A A +++ YLRDR + +TTHY+++ + E A+ EF + TL PTYR+L G G
Sbjct: 425 AFAMAVIDYLRDRKCKSFITTHYSEVKAHGYNEEGIETASMEFDVNTLSPTYRLLIGIPG 484
Query: 511 DSNALNIAKSIGFDRKIIQRAQ-------KLVERLRPERQQHRKSELYQSLMEERRKLES 563
+SNAL IAK +G ++I++A+ K +E++ ++ K++ +++ ++ L++
Sbjct: 485 ESNALTIAKRLGVSDEVIEKAKSYIGDDNKKIEKMIANIKE--KADELEAMKQQVEFLKA 542
Query: 564 QARTAASLHAEIMDLYREIEDEAKDL--------DRRAAHLKAKE---TQQVQQELNFAK 612
A+ +AE + R +E E ++ D+ ++AK +++Q+E N K
Sbjct: 543 AAQRDRDEYAEKL---RVLEKEKNEILKEAYEKADKMMKEMQAKAVALVEKIQKEEN--K 597
Query: 613 VQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF 672
+ VQ N LR A D+ N ++E + IA V D+ V
Sbjct: 598 KEDVKNVQKSLNMLRSALQDDRNKNVEE-KPKIARKV-------DYKV------------ 637
Query: 673 GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRL 732
G++V V SL ++ A V+++ G +TV VQ G +++ V
Sbjct: 638 GDKVFVNSL-NQFANVLKINGGKETVQVQAGILKLEV----------------------- 673
Query: 733 RKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSV 790
+D + + E ++ + +N +DLRG V+EA ++L+ L A S +
Sbjct: 674 --SMDDVKVVKEKAKKEYNTFSHTKTSVRNEIDLRGKMVDEAVYELETYLDRAVMNSYTE 731
Query: 791 LFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+++IHG GTG ++E +L L+ V +Y GCTV +K
Sbjct: 732 VYIIHGKGTGALREGILNYLKKCRYVKEYRLGGHGEGGLGCTVVTLK 778
>gi|210613370|ref|ZP_03289690.1| hypothetical protein CLONEX_01897 [Clostridium nexile DSM 1787]
gi|210151212|gb|EEA82220.1| hypothetical protein CLONEX_01897 [Clostridium nexile DSM 1787]
Length = 791
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 205/666 (30%), Positives = 315/666 (47%), Gaps = 93/666 (13%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R C+ +KA ++ + G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCLPVKAEYRSQVS-GMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ + A+ E++ + E+D FA+ A M+ PI ++ D
Sbjct: 245 EIQIILARLSVDAAEYIEELRSNYTILGELDFIFAKGALALSMNASRPIFNT------DG 298
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I+I +HPLL + VPI I +
Sbjct: 299 YIHIREGRHPLLDKKKV-----------------------------------VPITIMLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
E ++++TGPNTGGKT S+KT+GL +LM +AGL++PA + +L F+ + ADIGD QS+
Sbjct: 324 KEFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSKLSVFENVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL YL +R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLQDVDDRSLVLFDELGAGTDPTEGAALAIAILSYLHERGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF +ETLRPTY +L G G SNA I+ +G II
Sbjct: 444 ATTHYSELKVFALSTKGVENACCEFDVETLRPTYHLLIGIPGKSNAFAISSKLGLPDYII 503
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
+ A+ + + E ++ L+ + LE+ RT AEI REIE
Sbjct: 504 ESAKSHLS---------EQDESFEDLLAD---LETSRRTIEKEQAEIASYKREIEKLKHS 551
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
LD + L T+Q ++ + A + + ++++ ++ D + + KE+ SA
Sbjct: 552 LDAKQEKL----TEQKERIIKEANEKANAILRE-AKEVADETMKQFRKFGKENISAADME 606
Query: 649 VEAHRPDDDFSVSETN-------------TSSFTPQFGEQVHVKSLGDKLATVVEVPGDD 695
E R + +++ S F + GE V V S+ + TV +P
Sbjct: 607 RERERLRKKMAKTQSGMTLEKKKPKKQHKPSDF--RLGESVKVLSM-NLTGTVSSLPDAK 663
Query: 696 DTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGP 755
+ VQ G +R +V +++ I P KQ +G S A P
Sbjct: 664 GNLFVQMGILRSQVNISDLEIIE--------EPMTITAKQMRRTSTGKMKMSKSLA-VSP 714
Query: 756 RVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNH 813
+ +L G V+EA +LD L A S + ++HG GTG ++ + L+
Sbjct: 715 EI-------NLLGKTVDEAIAELDKYLDDAYIAHVSPVRIVHGKGTGALRNGIHSYLKRQ 767
Query: 814 PRVAKY 819
V Y
Sbjct: 768 KHVKSY 773
>gi|225386433|ref|ZP_03756197.1| hypothetical protein CLOSTASPAR_00180 [Clostridium asparagiforme
DSM 15981]
gi|225047464|gb|EEG57710.1| hypothetical protein CLOSTASPAR_00180 [Clostridium asparagiforme
DSM 15981]
Length = 805
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 248/842 (29%), Positives = 393/842 (46%), Gaps = 107/842 (12%)
Query: 5 VVQKAQIPFGKSL----------EESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNS 53
+ + A P GK+L EE + QT+ A+ ++ + + S + DI L
Sbjct: 18 LTEYAASPLGKALCAALEPSSDLEEIRTWQQQTTDAVNRVRLKGTVSFSGVRDIGDSLKR 77
Query: 54 AVSGQLLSPSEICAVRR--TLRAVNNVWKKLTEA-AELDG--DSLQRYSPLLELLKNCNF 108
G LS E+ ++ T A + + + E DG DSL+ P+ L+
Sbjct: 78 LEIGSSLSIPELLSISSLLTCSARAKAYGRHEDVDEENDGLSDSLE---PMFAALEP--- 131
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDK 168
LT L ++I CI + + D AS L +R K + + + L + +
Sbjct: 132 LTPLNQEIKRCILSEDEVA-DDASPGLSHVRRAMKLAADKIHTQLNSILNS--NRTYLQD 188
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
+IT R R C+ +K+ +K +P G+ + S++G+T F+EP V NN L E
Sbjct: 189 AVITMRDGRYCLPVKSEYKNQVP-GMVHDQSATGSTLFIEPMAIVRLNNEIRELEIREQK 247
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E A+L+ L+ + A ++ M + ++D FA++ A+ P+ + + +
Sbjct: 248 EIEAVLADLSNQAAPHCEDLAIDMQLLAQLDFIFAKSALARHYRCSAPVFNDRGY----- 302
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I+I+ +HPLL +P TV VPI + +
Sbjct: 303 -IHIKDGRHPLL---------------DP---------KTV-----------VPISVWLG 326
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ ++++TGPNTGGKT S+KT+GL +LM +AGL++PA L FD + ADIGD QS+
Sbjct: 327 KDFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGLHIPAWEGSELAVFDQVFADIGDEQSI 386
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV IL SL L DE+G+GTDP+EG ALA +IL +L + +
Sbjct: 387 EQSLSTFSAHMTNIVRILGEADSRSLCLFDELGAGTDPTEGAALAIAILSFLHNMKCRTM 446
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA+ EF++ETL+PTYR+L G G SNA I+ +G II
Sbjct: 447 ATTHYSELKVFALSAPGVENASCEFNVETLQPTYRLLIGVPGKSNAFAISSKLGLPDYII 506
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
A+ + E + +L SL + R +E + + EI L + + +
Sbjct: 507 DDAKTHL-----EAKDESFEDLLSSLEKSRLTIEKEQEELKAYKDEIAQLKARLTQKEER 561
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAI 648
LD R L ++ Q+ L AK D ++ Q+ SAD + L K+ E+ A +
Sbjct: 562 LDERKDKLLKNAAEEAQRILREAKETADQTIK----QINKLSAD--SGLNKQLEAQRAKL 615
Query: 649 VEAHR-PDDDFSVSETNTSS-FTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
E + DD ++ S +P + G+ V V S+G K TV +P + VQ G
Sbjct: 616 REKLKEADDKLAIKAKGPSQPISPKKLKVGDGVKVLSMGLK-GTVSTLPNARGDLYVQMG 674
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPA-PRLRKQQEDRQSGSAGSSN----EEASYGPRVQ 758
+R V ++ +P ++ P+ P + + GSSN + AS P V
Sbjct: 675 ILRSLVNVKDLELLP---EQDITGPSIPSSGGGKFSGKGRGTGSSNIKVSKSASISPEV- 730
Query: 759 TSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
+L GM V+EA ++ L A + + V+HG GTG +K V H R+
Sbjct: 731 ------NLIGMTVDEAMPVMEKYLDDAYLAHLTTVRVVHGRGTGALKNAV------HTRL 778
Query: 817 AK 818
K
Sbjct: 779 KK 780
>gi|392988863|ref|YP_006487456.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
gi|392336283|gb|AFM70565.1| MutS2 family protein [Enterococcus hirae ATCC 9790]
Length = 786
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 211/720 (29%), Positives = 343/720 (47%), Gaps = 95/720 (13%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L++IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKIIRQNIRRSEQTVREQLDGIVRGKNAKY-----LSDTIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK VE NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFVEPKQIVELNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ EI + + ++DL A+A F + + + P +S ++HV + +HPL
Sbjct: 257 ELVPHRHEIIHNAYVIGKLDLMNAKARFGKELKAIVPAISVENHVILKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + E + +VITGP
Sbjct: 311 I-----------------------DQEKVVAN------------DISIGKEYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM ++GL +P ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQSGLPIPVDEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILAHVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D+ +I A++L +
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDQSVINEAKQL---MN 512
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
E Q +E+ L R+ E++ E +LY +++ + K
Sbjct: 513 DESQD--LNEMIADLENRRKMAETEYLEMRHYVDEAQELYENLKEAYRYFFEEREKEIEK 570
Query: 600 ETQQVQQELNFAKVQIDTVVQD---FENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
++ + ++ A+ + ++ D + Q+ + E + LI E +
Sbjct: 571 AKKKANELVSEAQENAEKIIADIRKMQQQVGQGNVKE-HQLIDAKTKLANLHQEEQLKKN 629
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
+ P G++V V + G + T++ G+ V+ G +++ V ++ + P
Sbjct: 630 KVLKKAKEQKTLKP--GDEVLVTTYGQR-GTLLRKNGEQWQ--VEIGILKMNVSESELTP 684
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ AP Q+E +Q +E AS+ N LDLRG R EEA
Sbjct: 685 V-----------AP----QKEPKQRVIHAVRSESASH------VSNQLDLRGKRYEEALS 723
Query: 777 QLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
++D L A + ++HG GTG +++ + + L+NH V +E +P N G A I
Sbjct: 724 EVDQYLDSAILAGYPQVTIVHGKGTGALRQGITDYLKNHRSVKSFEF-APANQGGNGATI 782
>gi|300811593|ref|ZP_07092077.1| putative recombination and DNA strand exchange inhibitor protein
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497453|gb|EFK32491.1| putative recombination and DNA strand exchange inhibitor protein
[Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 786
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 230/729 (31%), Positives = 348/729 (47%), Gaps = 114/729 (15%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 147 VLDTASADLARLRHGR---LATEAEIKEKMTAYTRGKNGQYLSEQIVTIRDDRYVIPVKQ 203
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 204 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 258
Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 259 AREEMEAIKRVAAALSELDFLQAKAKLAKQMRASQPTLSA------DQSFKLLGARHPLI 312
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+P D V DI + + ++ITGPN
Sbjct: 313 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 337
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 397
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 398 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 457
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 458 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 517
Query: 541 ERQQHRKSELYQSL---MEERRKLESQARTAASLHAEI---MDLYREIEDEAKD--LDR- 591
+ H EL + E ++KL++ A L ++ +D+Y + + D LDR
Sbjct: 518 DI-NHMIDELNKQTKLATENKQKLQTSLDRAKQLEKKLQDALDIYNQRVQKQLDFALDRA 576
Query: 592 -RAAHLKAKETQQVQQELNFAK---VQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
K K+ ++ EL A+ +QI T NQL DA E N L K+
Sbjct: 577 NEIVAKKRKKADKIIAELEEARKEGMQIKT------NQLMDAKG-EFNQLAKQ------- 622
Query: 648 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
EA+ + V + Q G++V V S G + TV + G+ D V G++++
Sbjct: 623 --EANLAKN--KVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHD-YEVSLGRIKL 676
Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 767
+V +I + +++ A A+ R +++SLDLR
Sbjct: 677 KVTDRDIDKLATGQKQQA----------------------QRRATSASRSSRARSSLDLR 714
Query: 768 GMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 825
G R EEA LD S + +IHG+GTG +++ V + L+ + V Y +P
Sbjct: 715 GQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHVKTYSY-APA 773
Query: 826 NYGCTVAYI 834
N G T A I
Sbjct: 774 NEGGTGATI 782
>gi|332653476|ref|ZP_08419221.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
gi|332518622|gb|EGJ48225.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
Length = 789
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 242/827 (29%), Positives = 392/827 (47%), Gaps = 107/827 (12%)
Query: 17 LEESQKLLNQTSAALAMM--QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
L++ Q+ +TSAA+ M+ + P LS ++ + IL+ A G L+ E+ V LR
Sbjct: 43 LDDVQRAQEETSAAVKMLVLRGSP-GLSGVKPVGAILHRADMGGSLNTRELLEVAAVLRC 101
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
A+ GDS ++ +P+ L LE+ I I + + D AS +
Sbjct: 102 ART--------AKEYGDSEEK-TPISHLFHALTPNRFLEDTITNSIVGEDELA-DSASSE 151
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR + + +L+K+ + Q+ + + +IT R R V +K+ HK +P G+
Sbjct: 152 LASIRRHMRATEAKVRDILQKLISS-NQSKYLQESIITIRSDRYVVPVKSEHKNAIP-GL 209
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
+VS+SG+T+F+EP G V+ NN L E E IL+ L+A+ A + +I
Sbjct: 210 VHDVSASGSTFFIEPMGVVKANNELRELLAKEKKEIERILAELSAQCAAHKEDILEDYQL 269
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSN 314
++ +D FAR + M+G P LS D + + +HPLL
Sbjct: 270 LVWLDGIFARGQLSLKMEGSQPKLS-------DKYLRLRKARHPLL-------------- 308
Query: 315 SNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLA 374
D + + VP D+++ ++ITGPNTGGKT ++KT+GL
Sbjct: 309 ------DKKKA---------------VPNDLELGDTFDTLMITGPNTGGKTVTLKTIGLI 347
Query: 375 SLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESL 434
+LM++ GL++PA + FD +L+DIGD QS+ Q+LSTFS H++ IV ILE +L
Sbjct: 348 TLMAQCGLHIPAGADSTVRIFDRVLSDIGDEQSIAQSLSTFSSHMTNIVGILEEADDRTL 407
Query: 435 VLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFS 494
+L+DE+G+GTDP EG ALA +I++ R TTHYA+L ENA+ EF+
Sbjct: 408 ILLDELGAGTDPVEGAALAAAIIESARGMGAAVAATTHYAELKVYAMTTPGVENASCEFN 467
Query: 495 LETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSL 554
+ETL PTYR++ G G SNA I++ +G II++A R + + R ++ L
Sbjct: 468 VETLAPTYRLILGIPGKSNAFAISRRLGLPEYIIEKAAA-----RLDAENVRFEDVLTRL 522
Query: 555 MEERRKLESQARTAASLHAEIMDL------YRE-IEDE-AKDLDRRAAHLKA-KETQQVQ 605
++R+++E++ A L E+ YRE +E E AK +++ A +A E +
Sbjct: 523 DQQRQEMEAERAEAKRLKLEMEQSASKAREYREKLEAERAKVVEKAQAEARAIIEEARAA 582
Query: 606 QELNFAKVQIDTVVQDFEN--QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+L A+++ QD + Q+ D+ A E L+ E+E I E
Sbjct: 583 SDLALAELKEIKKRQDKLDWQQVNDSRA-EARRLLNEAERNIGGPA---------QEPEA 632
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
+ G+ V + +G K ATV+ V D T+ +Q G +++ K++ +R +
Sbjct: 633 PPPTRDAAVGDTVELLKMGTK-ATVLSV-NKDGTLQLQAGILKISAKQSEVRVVEGETET 690
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL- 782
A R ++ R + + +DLRGM +EA ++ L
Sbjct: 691 QKATRKIIARAERTIRTAAVP-----------------SEIDLRGMMTDEAVMAVERFLD 733
Query: 783 -ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
A + +IHG GTG V+ V L+ V + P YG
Sbjct: 734 TAMMGKLETVTIIHGKGTGAVRNAVRSYLKRSRYVKAFR---PGRYG 777
>gi|430860620|ref|ZP_19478219.1| MutS2 protein [Enterococcus faecium E1573]
gi|430552018|gb|ELA91768.1| MutS2 protein [Enterococcus faecium E1573]
Length = 786
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 215/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T+V G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLVRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|15644034|ref|NP_229083.1| DNA mismatch repair protein [Thermotoga maritima MSB8]
gi|418044562|ref|ZP_12682658.1| MutS2 protein [Thermotoga maritima MSB8]
gi|7387923|sp|Q9X105.1|MUTS2_THEMA RecName: Full=MutS2 protein
gi|4981836|gb|AAD36353.1|AE001783_4 DNA mismatch repair protein, putative [Thermotoga maritima MSB8]
gi|351677644|gb|EHA60791.1| MutS2 protein [Thermotoga maritima MSB8]
Length = 757
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 235/800 (29%), Positives = 363/800 (45%), Gaps = 110/800 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
+ + DI+ + SG L P E+ V L + + KK E E YS L
Sbjct: 60 IKGLNDISQEVEKVKSGSPLEPWELLRVSVFLEGCD-ILKKEFEKRE--------YSRLK 110
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
E + E E++ CI+ I DRAS L IR E+KR L S +K+ A
Sbjct: 111 ETFSRLSSFREFVEEVNRCIEQDGEIS-DRASPRLREIRTEKKR----LSSEIKRKADDF 165
Query: 161 FQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ + + + R R +KAS K + GI ++SSSGAT F+EP VE NN
Sbjct: 166 VRTHSQILQEQMYVYRDGRYLFPVKASMKNAV-RGIVHHLSSSGATVFLEPDEFVELNNR 224
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L E E + IL LT + +++ ++ + D +AR FA+ +G
Sbjct: 225 VRLLEEEERLEISRILRQLTNILLSRLNDLERNVELIARFDSLYARVKFAREFNGTV--- 281
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
V S I + +HPL+ +
Sbjct: 282 -----VKPSSRIRLVNARHPLIPKERV--------------------------------- 303
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VPI++++ R +ITGPN GGKT ++KT+GL + + +G LP L F I
Sbjct: 304 --VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPKI 361
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
+ADIG+ QS+EQ+LSTFS H+ +IV+I++ +SLV++DE+GSGTDP EG ALA +I++
Sbjct: 362 MADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAIAIIE 421
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
L ++ VTTH + NA+ EF ETL PTYR+L G G S+A IA
Sbjct: 422 DLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSHAFQIA 481
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
+ +G D++II+ A R R R++ L +SL E+ LE + R E M L
Sbjct: 482 EKLGLDKRIIENA-----RSRLSREEMELEGLIRSLHEKISLLEEEKRKLQKEREEYMKL 536
Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
+ E++ K L R KE +++ + K ++D + + + S DE+ +
Sbjct: 537 REKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAI----HVAKTGSVDEMREAV 592
Query: 639 KESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
K +E + D + + E P G+ V ++ G + VVEV T
Sbjct: 593 K--------TIEKEKKDLEQKRIEEATEEEIKP--GDHVKMEG-GTSVGKVVEV--KSGT 639
Query: 698 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 757
LV +G +R++V P +LRK +++ + ++ S + +S+
Sbjct: 640 ALVDFGFLRLKV------------------PVSKLRKTKKEEKKETSTFSYKPSSF---- 677
Query: 758 QTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
+ +D+RGM VEEA + I S ++IHG GTG + V EILR R
Sbjct: 678 ---RTEIDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEILRKDKR 734
Query: 816 VAKYEQESPMNYGCTVAYIK 835
V + +P G V ++
Sbjct: 735 VVSFRFGTPSEGGTGVTVVE 754
>gi|385840651|ref|YP_005863975.1| MutS2 protein [Lactobacillus salivarius CECT 5713]
gi|300214772|gb|ADJ79188.1| MutS2 protein [Lactobacillus salivarius CECT 5713]
Length = 786
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 229/798 (28%), Positives = 364/798 (45%), Gaps = 98/798 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI G LNS E+ A+ R LRA N V + + A D+ L + +
Sbjct: 79 DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIELEVLFDDVAK 125
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG 165
L E+ +K+ I+ + D AS L+ IR + E + L +
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNAYTRGT-NSKY 183
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+ ++T R R + +K ++ GI + SSSG T F+EP VE NN RL
Sbjct: 184 LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQ 239
Query: 226 EIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
++AE IL L+ E+A E+ + +D A+A +A + PILS ++
Sbjct: 240 QVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKEN 299
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
V + + HPLL +K V+N
Sbjct: 300 DVY------LRQVWHPLL----------------GMKKAVKN------------------ 319
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
DI + + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ FD I ADI
Sbjct: 320 -DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADI 378
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QS+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 379 GDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGA 438
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
+ V TTHY +L + NA+ EF TL+PTYR+L G G SNA +I++ +G
Sbjct: 439 KGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLG 498
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
D+ I+ A++L + +E+ L+ +R E + E +L+ ++
Sbjct: 499 LDKMIVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHDL 553
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKES 641
E +R+ ++ + ++ Q + K + D ++ + ++ AS E SLI
Sbjct: 554 ETNFHQFERQKENMLEQAKERANQIVEETKKKSDELISELRKMKMSAASNIEEGSLIDAQ 613
Query: 642 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
A E + + P + V V S G + V+ + VQ
Sbjct: 614 GRVNALHQETNLKKNKVLRKAKQQQELHPN--DDVMVNSYGQR--GVLLRKAGNHAWEVQ 669
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G +++++ ++++ I K + +++G+ S+ + P
Sbjct: 670 LGILKMKIDESDLEKIK--------------VKDTQPKRAGAVLKSSSSSHVSP------ 709
Query: 762 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+LDLRG R E A ++D I A + + +IHG GTG ++ ++ L+ + V +
Sbjct: 710 -TLDLRGERYENAMVKVDRYIDAAVLAGYNSVTIIHGKGTGALRTGIINYLKQNKAVKNF 768
Query: 820 EQESPMN--YGCTVAYIK 835
E SP N G TV Y K
Sbjct: 769 EFASPNNGGNGATVVYFK 786
>gi|377831881|ref|ZP_09814846.1| MutS family DNA mismatch repair protein [Lactobacillus mucosae LM1]
gi|377554259|gb|EHT15973.1| MutS family DNA mismatch repair protein [Lactobacillus mucosae LM1]
Length = 792
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 232/759 (30%), Positives = 351/759 (46%), Gaps = 147/759 (19%)
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----------AGGIDK 168
ID +LD AS L IR L+ K A+I Q A + +
Sbjct: 139 SIDQDTGAVLDEASSKLHGIR-----------QLIAKTEAEIRQQMEKYTHGKMAKYLSE 187
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R + + + + G+ + S+SG T ++EP V+ NN RL S+I
Sbjct: 188 PIITVRNERYVLPVLSRERSRF-GGVVHDQSASGQTLYIEPASTVDLNN---RLRQSQIE 243
Query: 229 EETAI---LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E + L+ L+ +A +I+ + +D A+A A P+LS V
Sbjct: 244 ERQEVRRVLAALSTMLAPYRLDIQNNAKILGHLDFVNAKAKMAHDTKATLPLLSQAGQVV 303
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
+ +HPL+ +P K+ V DI
Sbjct: 304 LKKA------RHPLI---------------DPKKA--------------------VANDI 322
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
K+ + +VITGPNTGGKT ++KTLGL LM ++G+++PA + +D I ADIGD
Sbjct: 323 KLGQDYHAIVITGPNTGGKTITLKTLGLIQLMGQSGMFIPAAEGSTIAVYDEIFADIGDE 382
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QSLEQNLSTFSGH+ + IL+ + SLVL+DE+G+GTDP EG ALA +IL D++G
Sbjct: 383 QSLEQNLSTFSGHMENVKAILDQTTAHSLVLLDELGAGTDPKEGAALAMAIL----DKIG 438
Query: 466 L----AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
VVTTHY +L NA+ EF +TLRPTYR+L G G SN + IAK +
Sbjct: 439 ALGSDVVVTTHYPELKAFAYDRPETINASMEFDQKTLRPTYRLLLGIPGQSNGIAIAKRL 498
Query: 522 GFDRKIIQRAQ-----------KLVERLRPERQQHR-KSELYQSLMEERRKLESQARTAA 569
G + II AQ K++ L +R+Q R +SE + L+ + + E
Sbjct: 499 GIGQDIIAEAQSLVSDDSQDLNKMIGELVEQRKQARERSEKLEVLLTKNKATEQ------ 552
Query: 570 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRD 628
E+ D E++ + L A ++K QV Q AK + D ++ ++
Sbjct: 553 ----ELNDKLTRFEEQREKLYEDA---RSKANHQVSQ----AKKKADQIIHHLRQLEITQ 601
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 688
+ + N LI +++ A+ A+ + R + SV + G+ V VKS G + +
Sbjct: 602 GGSVKENELI-DAQGALNALHQNPRLKHN-SVLKKAKQKRDLHKGDAVLVKSYGQR-GEL 658
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+E G+ VQ G +R+ + +N++ I KQQ +N
Sbjct: 659 LEKRGNHKWE-VQLGILRMEIDENDLEKIS---------------KQQ---------LAN 693
Query: 749 EEASYGPR------VQTSKNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMG 798
E + P+ VQT S LDLRG R E+A +L I A + S + VIHG G
Sbjct: 694 AEKEHEPKRRPVRTVQTRHTSARLDLRGHRYEQAMSELAQFIDHALLNNLSPVTVIHGKG 753
Query: 799 TGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
TG +++ E LR++PRV + +P G T+ Y++
Sbjct: 754 TGALRKGTWEYLRSNPRVKSFAYAAPNAGGDGATIVYLQ 792
>gi|302384796|ref|YP_003820618.1| MutS2 family protein [Clostridium saccharolyticum WM1]
gi|302195424|gb|ADL02995.1| MutS2 family protein [Clostridium saccharolyticum WM1]
Length = 796
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 244/820 (29%), Positives = 380/820 (46%), Gaps = 123/820 (15%)
Query: 27 TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR--TLRAVNNVWKKLTE 84
T AA + Q + + DI L G L +EI ++ T+ A + + E
Sbjct: 51 TDAATRVRQKGSISFGGVRDIRPSLKRLDVGSALGMAEILSISSLLTVSARVKAYGR-HE 109
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
+EL DSL+ +LE L N TE++ CI + + D AS L +R R
Sbjct: 110 DSELPEDSLEESFRMLEPLTPVN--TEIKR----CILSEEEVS-DDASPGLHHVR----R 158
Query: 145 NMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
+M +++ + I + + +IT R R C+ +K+ HK + G+ + SS+G
Sbjct: 159 SMRSINDKIHTQLNSILNSNRTYLQDAVITMRDGRYCLPVKSEHKSQV-SGMVHDQSSTG 217
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
+T F+EP V+ NN L E E +L+ L+ ++A E++ + + ++D F
Sbjct: 218 STLFIEPMAIVKLNNDLRALEIQEQKEIEMVLADLSNQLAPYLNELETDFEILTKLDFIF 277
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
A+A ++ + PI +++ INI+ +HPLL +P K
Sbjct: 278 AKAALSKHYNASEPIFNTKR------IINIKDGRHPLL---------------DPSKV-- 314
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
VPI I + + ++++TGPNTGGKT S+KT+GL +LM ++GL
Sbjct: 315 ------------------VPITIHLGRDFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGL 356
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++PA + L FD + ADIGD QS+EQ+LSTFS H++ IV IL SL L DE+G+
Sbjct: 357 HIPAFDGSELAVFDEVFADIGDEQSIEQSLSTFSAHMTNIVHILGQADSNSLCLFDELGA 416
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GTDP+EG ALA SIL +L + + TTHY++L ENA EF++ETL+PTY
Sbjct: 417 GTDPTEGAALAISILSFLHNMKCRTMATTHYSELKVFALTTPGVENACCEFNVETLKPTY 476
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM----EER 558
R+L G G SNA I++ +G II A+ +E K E ++ L+ E R
Sbjct: 477 RLLIGVPGKSNAFAISQKLGLPDYIIDDAKTHLE---------AKDETFEDLLTHLEENR 527
Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
+E + AS E+ L + + + LD R H+ + ++ Q+ L AK D
Sbjct: 528 VTIEKERIQIASYKLEVEQLKTRLTQKEERLDERRDHMIREAKEEAQRILRDAKETADQT 587
Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRP-------DDDFSVSETNTSSFTPQ 671
++ IN L ++S +A +EA R D D S+S N Q
Sbjct: 588 IR------------SINKL--AADSGVAKELEAQRSKLRNKLQDVDSSLSLKNEKK---Q 630
Query: 672 FGEQVHVK--SLGDKL--------ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
G+Q+ + LGD + TV +P + VQ G +R V N+ +
Sbjct: 631 PGKQIDPRKLKLGDGVKVLSMNLNGTVSSLPNAKGDLYVQMGILRSLV---NLSDLELLH 687
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIA 781
++ + PA ++ S + S + S P + +L GM +EA QLD
Sbjct: 688 EESVSTPAGIGSRKSGSGSSSTRMSKS--FSISPEI-------NLIGMTTDEAIPQLDKY 738
Query: 782 L--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
L A + V+HG GTG +K V H + KY
Sbjct: 739 LDDAYLAHLPQVRVVHGRGTGALKNAV----HKHLKKLKY 774
>gi|229013753|ref|ZP_04170881.1| hypothetical protein bmyco0001_41620 [Bacillus mycoides DSM 2048]
gi|423489714|ref|ZP_17466396.1| MutS2 protein [Bacillus cereus BtB2-4]
gi|423495437|ref|ZP_17472081.1| MutS2 protein [Bacillus cereus CER057]
gi|423497768|ref|ZP_17474385.1| MutS2 protein [Bacillus cereus CER074]
gi|228747422|gb|EEL97297.1| hypothetical protein bmyco0001_41620 [Bacillus mycoides DSM 2048]
gi|401150344|gb|EJQ57803.1| MutS2 protein [Bacillus cereus CER057]
gi|401162248|gb|EJQ69606.1| MutS2 protein [Bacillus cereus CER074]
gi|402431005|gb|EJV63077.1| MutS2 protein [Bacillus cereus BtB2-4]
Length = 786
Score = 255 bits (652), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 233/793 (29%), Positives = 378/793 (47%), Gaps = 103/793 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + + + + + +G L P+L
Sbjct: 65 LGGISDIRSNIKRAKIGSMLSPYELIEIASTMYGSRQMKRFIDDMID-NGVEL----PIL 119
Query: 101 EL-LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI ++ D AS+ L IR + + R E L+++ +
Sbjct: 120 ETHVAQIVSLYDLEKKITNCIGDGGEVV-DSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNERYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ V +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLSNVEVVANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLKQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ VP +I + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --EIIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQNLSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQNLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
I+K +G ++I RA+ + K E + +EE +K + R A H +
Sbjct: 493 EISKRLGLSDRVIDRARNHIS------TDTNKIENMIAKLEESQKNAERERKEAEEHRKQ 546
Query: 576 MD-LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEI 634
+ L+RE++ + + + K ++ ++++ AK + + ++ + QLR A +
Sbjct: 547 SEKLHRELQRQIIEFNDERDEKLLKAQKEGEEKVEAAKKEAEGIIHEL-RQLRKAQLVNV 605
Query: 635 --NSLIKES---ESAIAAIVEAHRPDDDFSVSETNTSSFTP-QFGEQVHVKSLGDKLATV 688
+ LI+ E A +V+ + V NT+ + G++V V + G K +
Sbjct: 606 KDHELIEAKSRLEGAAPELVKKQK------VHVKNTAPKQQLRSGDEVKVLTFGQKGQLL 659
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+V D VQ G ++++VK++N+ I KQ E + S +
Sbjct: 660 EKVS--DTEWSVQIGILKMKVKESNMEYINTP-------------KQTEKKAVASVKGRD 704
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
S LDLRG R E+A +++ L A S + +IHG GTG +++ V
Sbjct: 705 YHVSL---------ELDLRGERYEDAMMRVEKYLDDAQLASYPRVSIIHGKGTGALRQGV 755
Query: 807 LEILRNHPRVAKY 819
+ L+ H V Y
Sbjct: 756 QDYLKKHRGVKTY 768
>gi|8809580|dbj|BAA97131.1| DNA mismatch repair protein MutS2-like [Arabidopsis thaliana]
Length = 795
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 240/786 (30%), Positives = 369/786 (46%), Gaps = 136/786 (17%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIED--IAGILNSAVS 56
+G +K +S ES KLL++T AA+ M++ S LDLS+I + + A
Sbjct: 72 LGREATKKKLWSLDQSFSESLKLLDETDAAIKMLEHGSFCLDLSSIHISLVESGIRHAKR 131
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLK----NCNFLTEL 112
L + V LR N+ L A + DGD +R+ PL EL+ N +F+ +
Sbjct: 132 RLSLRADQALEVASLLRFFENLQLDLKAAIKQDGDWYKRFMPLSELIVHPVINRSFVKLV 191
Query: 113 EEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
E+ ID I D AS L R R+R ++ L+ L+++ I ++ D+ ++
Sbjct: 192 EQ----VIDPDG-TIKDSASSAL---RQSRER-VQTLERKLQQLLDAIIRSQKDDESVMI 242
Query: 173 KRR------SRMCV-----------GIKASHKYL----LPDGIALNVSSSGATYFMEPKG 211
K + R C+ G+ S Y L D + S SG EP
Sbjct: 243 KFQLAAEIDGRWCIQMSSNQLTSVNGLLLSSVYFQVLSLEDNMCF--SGSGGGTAAEPIA 300
Query: 212 AVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
AV N+ +++ + + +A+ E ILS+LT +I ARA +++
Sbjct: 301 AVSMND-DLQSARASVAKAEAEILSMLTEKIN--------------------ARATYSRA 339
Query: 271 MDGVCP--ILSSQSHVSFDSS------INIEGIK---------------HPLLLGSSLRS 307
G P L + V S+ IN+ K HPLLL +
Sbjct: 340 YGGAHPDIYLPPEDEVESLSAGENSPDINLPSEKPLSKKEWLLYLPRCYHPLLLYQHKKG 399
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ K T ++ G P+P D ++ TRV+VITGPNTGGKT
Sbjct: 400 IRKTRETVKFHK--------TADTVLSGAP--PIPADFQISKGTRVLVITGPNTGGKTIC 449
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+K++GLA++M+K+GLY+ A R+PWFD I ADIGD QSL Q+LSTFSGH+ +I +IL
Sbjct: 450 LKSVGLAAMMAKSGLYVLATESARIPWFDNIYADIGDEQSLLQSLSTFSGHLKQISEILS 509
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRF 486
+ SLVL+DE+G+GT+P EG AL +IL+ + L + TTH+ +L LK ++ F
Sbjct: 510 HSTSRSLVLLDEVGAGTNPLEGAALGMAILESFAESGSLLTMATTHHGELKTLKYSNSAF 569
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ-- 544
ENA EF L+PTY+ILWG G SNA+NIA +G II+ A++L E +
Sbjct: 570 ENACMEFDDLNLKPTYKILWGVPGRSNAINIADRLGLPCDIIESARELYGSASAEINEVI 629
Query: 545 ---HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
R + YQ L+ E R R + LH ++ + I D + KE
Sbjct: 630 LDMERYKQEYQRLLNESR---VYIRLSRELHENLLTAQKNINDHS-----------TKER 675
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAH---RPDDDF 658
++++QEL A + ++ Q R ++ K S+S +A ++ D+D
Sbjct: 676 RKMRQELTQAGSMTRSTLRRTLQQFRSSAG-------KSSQSKVATQLQTKVKTTKDEDN 728
Query: 659 SVSETNT----------SSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
+ ++ + P+ G V V SLG K ATV++V +LVQ G M+++
Sbjct: 729 GIRSSSVVERRPLPEAAAQKVPEVGSSVFVSSLGKK-ATVLKVEHSKKEILVQVGIMKMK 787
Query: 709 VKKNNI 714
VK ++
Sbjct: 788 VKLTDV 793
>gi|268611992|ref|ZP_06145719.1| MutS2 family protein [Ruminococcus flavefaciens FD-1]
Length = 796
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 241/822 (29%), Positives = 383/822 (46%), Gaps = 119/822 (14%)
Query: 26 QTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WKKL 82
+TS AL + +Q S +DI+ + A SG ++S ++ + LR + + W
Sbjct: 48 KTSQALELSVQFGTPPFSNFKDISSVAARAKSGAVVSLRDLMDIAAMLRQIKGLADWYAH 107
Query: 83 TEAAELDGDSL-QRYSP---LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
E E + L R P LLE L+ + ++E E I D AS +L I
Sbjct: 108 CENVETELSYLFTRLQPNDWLLEKLER-SIISENE-------------IADAASPELAAI 153
Query: 139 RAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
R + R E LD ++K Q + + + +T R R + +K+ ++ + +G+
Sbjct: 154 RRKINRAGMQLRETLDKMIKNKTTQQY----LQESNVTIRDGRFVLPVKSEYRGQV-NGL 208
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA-ILSLLTAEIAKSEREIKYLMD 253
+ S++G T F+EP VE NN ++RL + EE I+ L E +
Sbjct: 209 IHDTSATGQTLFIEPMAIVEANN-DIRLLEGKEQEEIERIIRELCRECGDYADILCENYK 267
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
E++L FA++ A + P ++ D + ++ +HPL+
Sbjct: 268 ICTELNLYFAKSNLAAKLRCTLP------EITDDGKMFLKKARHPLI------------- 308
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
D E + VPID+ + + + ++ITGPNTGGKT S+KT GL
Sbjct: 309 -------DREKA---------------VPIDLSLGEDYQALIITGPNTGGKTVSLKTAGL 346
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
S M GL +P + R+ F +LADIGD QS+EQNLSTFS H +++++IL+ S
Sbjct: 347 LSCMIMCGLLIPVADGSRISIFRHVLADIGDSQSIEQNLSTFSSHTNKVIEILKTADASS 406
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL+DE+GSGTDP EG ALA +I++ L +VTTHY +L ENA+ EF
Sbjct: 407 LVLLDELGSGTDPVEGAALAVAIIRRLMKSGAKIMVTTHYQELKVFAIDSENVENASCEF 466
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
+ETLRPTYR++ GS G SNA I++S+G II+ A+ V R E+
Sbjct: 467 DIETLRPTYRLIVGSPGKSNAFAISESLGMPSDIIEEAKSGV-----SEANSRLEEVIGK 521
Query: 554 LMEERRKLESQARTAASLHAE------IMDLYREIEDEAKDLDRRAAHLKA--------K 599
L R +LE AA LH E + +E + AK + A L+A
Sbjct: 522 LEAARIELEKMKDDAARLHREAAEHEEKLRKEKEEIEAAKADELEKARLRAMTIIEQTKA 581
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFS 659
E+ ++ EL + Q D +DF + + A + S K ++A V++ P+ D+
Sbjct: 582 ESNELIDELEKLRKQKDK--KDFSSNVSGAKSKAKQSFNKMYDTANP--VDSKDPNADYV 637
Query: 660 VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+ + G+ V+V LG K V P D V VQ G M+ ++ + +R +
Sbjct: 638 LPR------KLKRGDTVYVVDLGRK-GIVSGDPDGSDFVFVQMGVMKTKMAVSRLR-LEE 689
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
+ + N + + +R+ G E + K LD+RG ++ +QLD
Sbjct: 690 TPKVTVGN-----KSVKPNRKMNKVGVKAE--------RRGKMELDIRGCACDDGIYQLD 736
Query: 780 --IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
I A + S + +IHG GTG++++ V L++HP V +
Sbjct: 737 AFIDRAVMSNISTITIIHGKGTGLLRQAVHRRLKSHPSVKAF 778
>gi|358066120|ref|ZP_09152654.1| MutS2 protein [Clostridium hathewayi WAL-18680]
gi|356695983|gb|EHI57608.1| MutS2 protein [Clostridium hathewayi WAL-18680]
Length = 792
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 235/810 (29%), Positives = 380/810 (46%), Gaps = 103/810 (12%)
Query: 27 TSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR--TLRAVNNVWKKLTE 84
T AA + Q + ++DI L G LS +E+ ++ T+ A + + + E
Sbjct: 51 TDAATRVRQKGGISFGGLKDIRDSLKRLEVGSSLSITELLSISSLLTISARSKAYGR-HE 109
Query: 85 AAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKR 144
+EL DSL+ +L ++ LT + +I CI + + D AS L +R R
Sbjct: 110 ESELPNDSLE------DLFRSLEPLTPVNTEIKRCIISEEEVS-DDASPGLRHVR----R 158
Query: 145 NMENLDSLLKKVAAQIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSG 202
+M+ ++ + I + + P+IT R R C+ +K+ +K + G+ + SS+G
Sbjct: 159 SMKVINDRVHTQLNAILNSSRTYLQDPVITMRDGRYCLPVKSEYKNQVA-GMVHDQSSTG 217
Query: 203 ATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAF 262
+T F+EP ++ NN L E E A+L+ L+ ++ E+ + ++D F
Sbjct: 218 STLFIEPMAIIKLNNELRELEIQEQKEIEAVLADLSNQLLPYMEELASNQSVLAQLDFIF 277
Query: 263 ARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDV 322
ARA ++ P ++ + INI+ +HPLL +P K
Sbjct: 278 ARAALSRHYKCSEPSFNTNGY------INIKDGRHPLL---------------DPQKV-- 314
Query: 323 ENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGL 382
VPI+I + E ++++TGPNTGGKT S+KT+GL +LM +AGL
Sbjct: 315 ------------------VPINIHLGKEFDLLIVTGPNTGGKTVSLKTVGLFTLMGQAGL 356
Query: 383 YLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGS 442
++PA + L F+ + ADIGD QS+EQ+LSTFS H++ IV ILE SL L DE+G+
Sbjct: 357 HIPAFDGSELAVFEEVFADIGDEQSIEQSLSTFSAHMTNIVSILEQADSHSLCLFDELGA 416
Query: 443 GTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTY 502
GTDP+EG ALA ++L +L + + TTHY++L ENA EFS+ETL+PTY
Sbjct: 417 GTDPTEGAALAIAVLTFLHNMKCRTMATTHYSELKVFALTTPGVENACCEFSVETLQPTY 476
Query: 503 RILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 562
R+L G G SNA I++ +G II A R E ++ L E R +E
Sbjct: 477 RLLIGIPGKSNAFAISRKLGLPEFIIDDA-----RTHLESSDEAFEDVLTHLEESRVTIE 531
Query: 563 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF 622
+ + A++ L +E + LD + + ++ Q+ L AK D +++
Sbjct: 532 KEQAEIQAYKAQVAQLKARLEQKEGRLDEQKEKYMREAREEAQRILREAKETADKTIKNI 591
Query: 623 ENQLRDASADEINSLIKESESAIAAIVEAHRP-DDDFSVSETN-----TSSFTPQFGEQV 676
N+L ++S + K+ E A + E + D + S+ + S + G+ V
Sbjct: 592 -NKLAESSG-----VAKQLEEERARLREELKKVDQNLSIKKEKDPKKVVSPKSLHIGDSV 645
Query: 677 HVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQ 736
V S+ K TV +P + VQ G +R V ++ I + A P L K
Sbjct: 646 MVLSMNLK-GTVSTLPNAKGDLYVQMGILRSLVNIKDLELI-----EEATVSGPNLDK-- 697
Query: 737 EDRQSGSAGSSNEEASYGPRVQTSKN-----SLDLRGMRVEEASHQLDIAL--ACWESRS 789
+++GS +++ SK+ ++L GM +EA LD L A
Sbjct: 698 --KRTGSG-----------KIKMSKSFSVSPEINLIGMTTDEAVSILDKYLDDAYLAHLP 744
Query: 790 VLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ V+HG GTG +K V L+ V +Y
Sbjct: 745 QVRVVHGRGTGALKAAVHRRLKQLKYVKEY 774
>gi|257882656|ref|ZP_05662309.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
gi|294622756|ref|ZP_06701711.1| MutS2 family protein [Enterococcus faecium U0317]
gi|416132269|ref|ZP_11597881.1| MutS2 family protein [Enterococcus faecium E4452]
gi|424795296|ref|ZP_18221164.1| MutS2 family protein [Enterococcus faecium S447]
gi|424855055|ref|ZP_18279381.1| MutS2 family protein [Enterococcus faecium R499]
gi|424950176|ref|ZP_18365348.1| MutS2 family protein [Enterococcus faecium R496]
gi|424957193|ref|ZP_18371933.1| MutS2 family protein [Enterococcus faecium R446]
gi|424960033|ref|ZP_18374581.1| MutS2 family protein [Enterococcus faecium P1986]
gi|424966350|ref|ZP_18380154.1| MutS2 family protein [Enterococcus faecium P1140]
gi|424994917|ref|ZP_18406830.1| MutS2 family protein [Enterococcus faecium ERV168]
gi|424998362|ref|ZP_18410055.1| MutS2 family protein [Enterococcus faecium ERV165]
gi|425001768|ref|ZP_18413255.1| MutS2 family protein [Enterococcus faecium ERV161]
gi|425004274|ref|ZP_18415594.1| MutS2 family protein [Enterococcus faecium ERV102]
gi|425012205|ref|ZP_18423037.1| MutS2 family protein [Enterococcus faecium E422]
gi|425018028|ref|ZP_18428507.1| MutS2 family protein [Enterococcus faecium C621]
gi|425032607|ref|ZP_18437636.1| MutS2 family protein [Enterococcus faecium 515]
gi|430827998|ref|ZP_19446128.1| MutS2 protein [Enterococcus faecium E0269]
gi|431746632|ref|ZP_19535457.1| MutS2 protein [Enterococcus faecium E2134]
gi|431767631|ref|ZP_19556078.1| MutS2 protein [Enterococcus faecium E1321]
gi|431775339|ref|ZP_19563612.1| MutS2 protein [Enterococcus faecium E2560]
gi|431780207|ref|ZP_19568392.1| MutS2 protein [Enterococcus faecium E4389]
gi|431781496|ref|ZP_19569643.1| MutS2 protein [Enterococcus faecium E6012]
gi|431786129|ref|ZP_19574145.1| MutS2 protein [Enterococcus faecium E6045]
gi|257818314|gb|EEV45642.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
gi|291597807|gb|EFF28944.1| MutS2 family protein [Enterococcus faecium U0317]
gi|364093369|gb|EHM35646.1| MutS2 family protein [Enterococcus faecium E4452]
gi|402924563|gb|EJX44761.1| MutS2 family protein [Enterococcus faecium S447]
gi|402931801|gb|EJX51358.1| MutS2 family protein [Enterococcus faecium R499]
gi|402933643|gb|EJX53063.1| MutS2 family protein [Enterococcus faecium R496]
gi|402944145|gb|EJX62582.1| MutS2 family protein [Enterococcus faecium R446]
gi|402949000|gb|EJX67094.1| MutS2 family protein [Enterococcus faecium P1986]
gi|402956711|gb|EJX74151.1| MutS2 family protein [Enterococcus faecium P1140]
gi|402978799|gb|EJX94516.1| MutS2 family protein [Enterococcus faecium ERV168]
gi|402983441|gb|EJX98841.1| MutS2 family protein [Enterococcus faecium ERV165]
gi|402985390|gb|EJY00600.1| MutS2 family protein [Enterococcus faecium ERV161]
gi|402990027|gb|EJY04923.1| MutS2 family protein [Enterococcus faecium ERV102]
gi|402994063|gb|EJY08626.1| MutS2 family protein [Enterococcus faecium E422]
gi|403003183|gb|EJY17093.1| MutS2 family protein [Enterococcus faecium C621]
gi|403012545|gb|EJY25764.1| MutS2 family protein [Enterococcus faecium 515]
gi|430484079|gb|ELA61114.1| MutS2 protein [Enterococcus faecium E0269]
gi|430608534|gb|ELB45780.1| MutS2 protein [Enterococcus faecium E2134]
gi|430630584|gb|ELB66939.1| MutS2 protein [Enterococcus faecium E1321]
gi|430640686|gb|ELB76520.1| MutS2 protein [Enterococcus faecium E4389]
gi|430643055|gb|ELB78811.1| MutS2 protein [Enterococcus faecium E2560]
gi|430646202|gb|ELB81696.1| MutS2 protein [Enterococcus faecium E6045]
gi|430649441|gb|ELB84818.1| MutS2 protein [Enterococcus faecium E6012]
Length = 786
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNTYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|261208743|ref|ZP_05923180.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289565573|ref|ZP_06446020.1| MutS2 protein [Enterococcus faecium D344SRF]
gi|260077245|gb|EEW64965.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289162655|gb|EFD10508.1| MutS2 protein [Enterococcus faecium D344SRF]
Length = 786
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 351/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRYFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P+N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APVN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|227888700|ref|ZP_04006505.1| MutS family DNA mismatch repair protein [Lactobacillus johnsonii
ATCC 33200]
gi|227850727|gb|EEJ60813.1| MutS family DNA mismatch repair protein [Lactobacillus johnsonii
ATCC 33200]
Length = 788
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 220/751 (29%), Positives = 351/751 (46%), Gaps = 98/751 (13%)
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK-V 156
P+ + LKN +L +K+ I+ + D AS L +R + + N ++ + + +
Sbjct: 118 PIEKTLKNLAIPEDLFKKLNQAIEYDG-TVKDTASSKLMQLRHDIQSNETDIKNHMNDYI 176
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ + Q + + ++T R R + +K +K G+ + S+SG T F+EP+ + N
Sbjct: 177 SGKHTQY--LSENIVTIRDGRYVLPVKQEYKNKFG-GVVHDQSASGQTLFVEPQAVLVLN 233
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N + L E E IL L+ ++EIK D + ++D A++ A+ M P
Sbjct: 234 NRQQNLMAQERQEINRILIELSELAGMYQKEIKNNADALTQLDFLSAKSKLAKAMKATEP 293
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+L+ Q HV I + +HPL+ NP K
Sbjct: 294 VLN-QDHV-----IKLRKARHPLI---------------NPKKV---------------- 316
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP +I++ ++ITGPNTGGKT ++KTLGL LM++AGL++ A+ +L F+
Sbjct: 317 ----VPNNIELGTSFDTMLITGPNTGGKTITLKTLGLLQLMAQAGLFITAEEGSQLTVFN 372
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQ+LSTFS H+ +I+ I++ V+ + LVLIDE+G+GTDP EG +LA +I
Sbjct: 373 EIYADIGDEQSIEQSLSTFSSHMDQIIKIMKDVTEDDLVLIDELGAGTDPEEGASLAIAI 432
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L LR +TTHY +L R NA+ EF L+ L PTYR+ G G SNA
Sbjct: 433 LDDLRGAQAKIAITTHYPELKLYGYNRARTTNASMEFDLKKLAPTYRLRIGIPGQSNAFA 492
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
IA +G + ++ +A+ L+ S++ + M ER L Q + A LH +
Sbjct: 493 IAHQLGMNETVVNKARSLM--------NDEDSDINK--MIER--LTEQTKAAEQLHETL- 539
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA-----------KVQIDTVVQDFENQ 625
++ D++ L R+ + QQVQ++L A + + D ++ D E Q
Sbjct: 540 ---KQNVDQSITLKRQLQNGLDWYNQQVQKQLEKAQEKADEMLAKKRQKADKIINDLEEQ 596
Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
R N +I E++ A+ + ++ V + G+ V V S G +
Sbjct: 597 RRAGGQVRTNKVI-EAKGALNKLERENQNLAQNKVLQREKRRHDVSVGDTVKVLSYGQQ- 654
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
V+ D VQ G ++V+V ++ I A A R
Sbjct: 655 -GVITKKLADHEFEVQIGILKVKVTDRDVEKISTQAAPKKAERAVR-------------- 699
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVK 803
+S G R + + LDLRG R EEA LD I + + + +IHG+GTG ++
Sbjct: 700 -----SSRGLRSTRASSELDLRGQRYEEALTNLDRYIDSSLLAGLNTVTIIHGIGTGAIR 754
Query: 804 ERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
V + L+ + V Y +P N G T A I
Sbjct: 755 NGVQQYLKRNRHVKSYSY-APANQGGTGATI 784
>gi|425052198|ref|ZP_18455823.1| MutS2 family protein [Enterococcus faecium 506]
gi|403035239|gb|EJY46637.1| MutS2 family protein [Enterococcus faecium 506]
Length = 786
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEKVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|251780590|ref|ZP_04823510.1| MutS2 family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084905|gb|EES50795.1| MutS2 family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 785
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 226/831 (27%), Positives = 385/831 (46%), Gaps = 120/831 (14%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRR 70
+P+ + E + L A +M+ + + DI IL A G L+P ++ V
Sbjct: 35 VPYDNTYEINNSLEESNEALEILMKKGNPPIEGLCDIGDILQRAKKGGTLTPEQLLKVLG 94
Query: 71 TLRAVNNVWKKLT-EAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILD 129
L A + + E E+ S + L +L N L + E+ D + D
Sbjct: 95 MLTATRRMQEFFKREEQEV---SFPKLEDLAYILAPINDLEKEIERSILSEDE----VSD 147
Query: 130 RASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHK 187
AS L IR R+++ +S +++ I ++ + L T R R + +KA +K
Sbjct: 148 NASTTLYNIR----RSLKEKNSSVREKINSIVRSNSKYLQDSLYTIRGDRYVIPVKAEYK 203
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
+P G+ + SS+GAT F+EP G V NN L E AE +LS L+ ++ +
Sbjct: 204 SSVP-GLVHDQSSTGATLFIEPMGLVNLNNEIKELMLKEKAEIDRVLSALSLKVKMNAEH 262
Query: 248 IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+ + +D F++ +A ++ + P+ V D NI +HPL+
Sbjct: 263 CESNFKILTNLDFIFSKGKYACELNAIKPM------VRDDGIFNIMSGRHPLIE------ 310
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
D VP+D+ + E ++ITGPNTGGKT +
Sbjct: 311 -----------------------------KDKVVPLDVVLGDEFDTLMITGPNTGGKTVT 341
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KT+GL +M+ +GL +PA ++ + +F + ADIGD QS+EQ+LSTFS H++ IV+I+E
Sbjct: 342 LKTVGLLHIMALSGLLIPASSNSSVSFFKEVFADIGDEQSIEQSLSTFSSHLTNIVNIME 401
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+R+SL+L DE+G GTDP+EG ALA +I++ L + + TTHY++L R E
Sbjct: 402 YDNRQSLILFDELGGGTDPAEGAALAIAIIENLSSKGAKLIATTHYSELKAYALNKERVE 461
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF + TLRPTYR+L G G SNA I+K IG +++I A+ + + E +
Sbjct: 462 NASVEFDINTLRPTYRLLIGVPGKSNAFEISKRIGLGKEVIDCAKNYMSKENLEFEG--- 518
Query: 548 SELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLD--RRAAHLKAKETQQVQ 605
L ++L E+ + AR A + E +L ++ E + + L+ + A++ A+E +
Sbjct: 519 --LIRNLQEKSIIAKKDARDAKVIKDEADNLKKKYEQKLERLEKVKDKAYMDAREEAK-- 574
Query: 606 QELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE-----SAIAAIVEAHRP--DDDF 658
+V + +++ ADEI ++E E S +E R D
Sbjct: 575 -----------KIVANAKDE-----ADEILKAMRELEKLGIGSGGRQRLEEERKKLKDSL 618
Query: 659 SVSETNTSSFTPQFGEQVHVKSLG--------DKLATVVEVPGDDDTVLVQYGKMRVRVK 710
E GE + +LG ++ V+ +P + V V+ G M++ VK
Sbjct: 619 EEKEKKLYKMKENDGEVLEKVALGMEAFLPSLNQTVVVISMPDNRGEVQVEAGIMKISVK 678
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
++R + + + E + +V+ N +DLRG+
Sbjct: 679 LKDLR-------------------KTKQSKVEKVKKKRELKLHFSKVE---NRIDLRGLD 716
Query: 771 VEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
EEA +++D L A + + ++HG GTG++++ + ++L+ H V Y
Sbjct: 717 AEEACYRVDKYLDDAYMGNLGEVTIVHGKGTGILRKAINDMLKRHVHVKNY 767
>gi|431546278|ref|ZP_19518903.1| MutS2 protein [Enterococcus faecium E1731]
gi|430591597|gb|ELB29626.1| MutS2 protein [Enterococcus faecium E1731]
Length = 786
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIQAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|335429528|ref|ZP_08556426.1| recombination and DNA strand exchange inhibitor protein [Haloplasma
contractile SSD-17B]
gi|334889538|gb|EGM27823.1| recombination and DNA strand exchange inhibitor protein [Haloplasma
contractile SSD-17B]
Length = 780
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 232/820 (28%), Positives = 380/820 (46%), Gaps = 91/820 (11%)
Query: 23 LLNQTSAALAMM-QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
LL +T AL ++ + L I DI + A G +L+P+E+ + + N + K
Sbjct: 45 LLTETDEALRLLYRLGDLPFGGITDIRPHIKRATIGGILNPNELLKISTFIYGSNQIRKY 104
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
AA+++ + ++ ++ ++N L++L +I CID ++D AS L+ IR +
Sbjct: 105 ---AAKMEQEQIES-DKIVFYIENLFNLSDLSREINRCID-DFSNVVDDASPKLKDIRNQ 159
Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSS 201
K N + L + Q + + LIT R R V +K +K GI + S S
Sbjct: 160 IKTNEARIKDRLNSILQS--QKDLLTEQLITIRNDRFVVPVKVENKNTFG-GIIHDQSQS 216
Query: 202 GATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLA 261
G T+++EPK VE NN L N E E IL LT +++ E++ + + +D
Sbjct: 217 GNTFYIEPKMVVEVNNRIQNLKNEEKREIEKILRELTLSVSEYVGELQENVYNIKLLDFI 276
Query: 262 FARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSD 321
+ +A +A+ + P ++ + V + +HPL+ P
Sbjct: 277 YTKAKYAKATNATKPTINDEGFVHLIKA------RHPLI----------------P---- 310
Query: 322 VENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAG 381
D VP DI + E ++ITGPNTGGKT ++KTLGL +LM +AG
Sbjct: 311 ---------------EDEIVPNDIMLGQEFTSIIITGPNTGGKTVTLKTLGLLTLMMQAG 355
Query: 382 LYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIG 441
L +PA H +L FD + ADIGD QS+EQ+LSTFS H+ I++I++ ++ SLVL+DE+G
Sbjct: 356 LLVPANEHSKLAVFDNVFADIGDEQSIEQSLSTFSSHMKTIINIVDNITINSLVLLDELG 415
Query: 442 SGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPT 501
+GTDP EG ALA S+L Y R R + TTHY +L + NA+ EF++ETL+PT
Sbjct: 416 AGTDPKEGAALAMSLLDYFRKRGSRIIATTHYPELKTYAYNTEKVINASVEFNVETLKPT 475
Query: 502 YRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKL 561
Y++L G G SNA I+K +G + +I+ A R + + +Q + L L + +L
Sbjct: 476 YKLLIGIPGRSNAFEISKRLGLNELVIEDA-----REKVDFEQTDVANLISQLETKGLQL 530
Query: 562 ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQD 621
E + ++ + ++ D+DR+ + K Q+ + A + V+ +
Sbjct: 531 EKLIDENEQFNQKLKQEKNTYQSKSLDIDRQKEKMIEKAKQEAASIIKSANQEAKEVINE 590
Query: 622 FENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVK 679
+ + A + KE E +++ + + S + Q G+QV V
Sbjct: 591 LKELKKGAKTN-----YKEHE---VINIKSKLDSSKYYKQKEKVSKTSHQLKEGDQVMVL 642
Query: 680 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 739
+ + +V + LVQ G ++ RV ++ I K+ +N + R R
Sbjct: 643 TFNRSGILIEQV--NKKEWLVQIGALKSRVNNKHLEYIG----KDDSNKIEKERTVTVKR 696
Query: 740 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGM 797
LDLRG R +EA +LD I + + +++IHG
Sbjct: 697 AKKKVTM----------------ELDLRGNRFDEAISRLDKFIDDSILNNFEKIYIIHGH 740
Query: 798 GTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
GTG ++ V L+ V +E +E G TVA K
Sbjct: 741 GTGALRNGVRNYLKKSKYVKSFEYGREGEGGTGVTVANFK 780
>gi|293553120|ref|ZP_06673758.1| MutS2 family protein [Enterococcus faecium E1039]
gi|430822931|ref|ZP_19441506.1| MutS2 protein [Enterococcus faecium E0120]
gi|430838514|ref|ZP_19456460.1| MutS2 protein [Enterococcus faecium E0688]
gi|430857731|ref|ZP_19475364.1| MutS2 protein [Enterococcus faecium E1552]
gi|430865610|ref|ZP_19481245.1| MutS2 protein [Enterococcus faecium E1574]
gi|431742713|ref|ZP_19531597.1| MutS2 protein [Enterococcus faecium E2071]
gi|291602711|gb|EFF32925.1| MutS2 family protein [Enterococcus faecium E1039]
gi|430442860|gb|ELA52881.1| MutS2 protein [Enterococcus faecium E0120]
gi|430491756|gb|ELA68208.1| MutS2 protein [Enterococcus faecium E0688]
gi|430546941|gb|ELA86883.1| MutS2 protein [Enterococcus faecium E1552]
gi|430552957|gb|ELA92674.1| MutS2 protein [Enterococcus faecium E1574]
gi|430607682|gb|ELB44983.1| MutS2 protein [Enterococcus faecium E2071]
Length = 786
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|306490800|gb|ADM94921.1| mismatch repair ATPase [uncultured candidate division JS1
bacterium]
Length = 790
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 218/755 (28%), Positives = 358/755 (47%), Gaps = 128/755 (16%)
Query: 112 LEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGID 167
LE+ I I+ +L I+ D AS L+ IR + ++ E L++++K ++ I
Sbjct: 132 LEKTIKDSINEELQIV-DDASPLLKKIRQKIHSIERKIKEKLENIIKDPQNRLI----IQ 186
Query: 168 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
+IT R+ R + +K K P G+ + S SG T FMEP VEFNN L E
Sbjct: 187 DDIITIRQGRYVIPVKQQEKGKFP-GVIHDKSESGVTVFMEPLPVVEFNNELRELYQDEK 245
Query: 228 AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFD 287
EE IL LTA + ++ EI Y + E+D A+A + M V P ++ Q
Sbjct: 246 QEEYRILQKLTALVGQNGEEILYSYQILGELDFINAKAKLSIKMKAVEPQINEQG----- 300
Query: 288 SSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKV 347
I++ +HPLL K+ V VPIDI++
Sbjct: 301 -IIHLYKARHPLL------------------KNKV------------------VPIDIEL 323
Query: 348 ECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQS 407
+ +++ITGPNTGGKT ++KT+GL +LM+++GL++P + + F I ADIGD QS
Sbjct: 324 GEKFEILIITGPNTGGKTVTLKTVGLLTLMAQSGLHIPVEVDSEVAIFKKIFADIGDEQS 383
Query: 408 LEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLA 467
+EQ+LSTFS HI I+ ILE + SLVL+DE+G+GTDPSEG ALA +IL L+ +
Sbjct: 384 MEQSLSTFSAHIQNIIHILEEADQYSLVLLDELGAGTDPSEGSALAMAILDLLKSKGAKV 443
Query: 468 VVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKI 527
+ TTH+ L NA EF +TL+PTY+I G G S A +A+ +G +
Sbjct: 444 LSTTHHDSLKAYAYLTEGVMNAKVEFDEKTLKPTYKISIGLPGKSCAFAVAQRLGLPEMV 503
Query: 528 IQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR--------TAASLH------A 573
+ +A+ Q L++E+ LE+ R AASL
Sbjct: 504 LDKAE-------------------QYLVKEKLDLENLIRKMEKDKDQVAASLQYIKREKG 544
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA-- 631
+I L +E+E++ L +K + Q+ ++ L+ A+ + +++ + + D A
Sbjct: 545 QISQLKKELEEKIGALQEEEKKIKLEAYQEAEKILSLAQTRAKEMIKSLKRKKYDGEAFV 604
Query: 632 DEINSL--IKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
EI +L +KE A + + F + G++V + SLG + T++
Sbjct: 605 QEIKALEDVKEDIKKEATKYTLRQAVNHF------------EKGDRVFINSLGRE-GTIL 651
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS------KRKNAANPAPRLRKQQEDRQSGS 743
E +Q +R+++ ++++ +P ++ N P L +
Sbjct: 652 EKNEKKKQYTIQVANLRLKIPVSDLKQVPQGDFSNIDRKTNIEEAFPPLT---------T 702
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
G+ ++A + KN +D+R M +A +L+ L A S +++IHG G G+
Sbjct: 703 RGNIEKKAHF-------KNEIDIREMSASDAEIRLEKYLDDAFLLGVSPVYIIHGRGKGI 755
Query: 802 VKERVLEILR--NHPRVAKYEQESPMNYGCTVAYI 834
++E+V +L+ N+ + +Y + G TV Y
Sbjct: 756 LREKVAHLLKNINYVKSYRYGETFEGGDGVTVVYF 790
>gi|312143799|ref|YP_003995245.1| MutS2 family protein [Halanaerobium hydrogeniformans]
gi|311904450|gb|ADQ14891.1| MutS2 family protein [Halanaerobium hydrogeniformans]
Length = 790
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 183/541 (33%), Positives = 273/541 (50%), Gaps = 63/541 (11%)
Query: 21 QKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWK 80
+KL T+ + + L I DI L A G +LS +I +R TLR + + K
Sbjct: 45 EKLAEVTALKTMITEFGKLPFGGIRDIRESLKKAEKGSVLSTDKINDIRNTLRGIKEIDK 104
Query: 81 KLTEAA-ELDGDSLQR-YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
+ ELD ++R Y L E+ +L +I CI+ I D AS L+ +
Sbjct: 105 YFVKIKDELDPRIIEREYQLLYEITAELLPREKLAREIDRCIN-DYGEIADDASSKLKSL 163
Query: 139 RAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
RA + ++EN LDS++K Q + + ++TKR +R V +K H+ DG
Sbjct: 164 RA-KIDSIENGIRDKLDSIIKSSKYQDM----LQESIVTKRENRYVVPVKQEHRNKF-DG 217
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
I S+SG T FMEP V NN + E AE IL +L+++IA+ IK +
Sbjct: 218 IIHGQSASGLTLFMEPMAVVRLNNQLREVRAQESAEIQRILQVLSSKIAEQAEIIKKDLK 277
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ +D+ A A F+ D P ++ + I+++ +HPLL
Sbjct: 278 IISHLDVISASARFSLDHDCNAP------DINQEGLIDLKEARHPLL------------- 318
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+ PVPID+++ + +VITGPNTGGKT S+KT+GL
Sbjct: 319 -----------------------KEEPVPIDVQLGDQISTLVITGPNTGGKTVSLKTVGL 355
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
+LM++ G+++PAK + + F + ADIGD QS+EQ+LSTFS H+++I + L +
Sbjct: 356 LTLMAQTGMHIPAKANSTIAVFKKVFADIGDEQSIEQSLSTFSSHMTKIKEFLAESDSNT 415
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL+DE+G GTDP EG AL SIL+ L+ + + + TTHY+ L ENA+ EF
Sbjct: 416 LVLMDELGVGTDPEEGAALGISILEELQQKGAVTIATTHYSQLKSYAYGADNVENASVEF 475
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL-------VERLRPERQQHR 546
+E+LRPTY ++ G G SNA IA +G II+RA+ L VE + E Q R
Sbjct: 476 DIESLRPTYNLIMGVPGGSNAFEIALRLGIPEGIIKRARSLLTEEEIKVEDIINELNQER 535
Query: 547 K 547
K
Sbjct: 536 K 536
>gi|422844164|ref|ZP_16890874.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|325685729|gb|EGD27807.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 787
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 229/729 (31%), Positives = 348/729 (47%), Gaps = 114/729 (15%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMTAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMEAIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
IV I++ VS +SLVLIDEIG+GTDP EG LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGARLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVAGAEKLMSSDDS 518
Query: 541 ERQQHRKSELYQS---LMEERRKLESQARTAASLHAEI---MDLYREIEDEAKD--LDR- 591
+ H EL + + E ++KL++ A L ++ +D+Y + + D LDR
Sbjct: 519 DI-NHMIDELNKQTKLVTENKQKLQTSLDRAKQLEKKLQDALDIYNQRVQKQLDFALDRA 577
Query: 592 -RAAHLKAKETQQVQQELNFAK---VQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
K K+ ++ EL A+ +Q+ T NQL DA E N L K+
Sbjct: 578 NEIVAKKRKKADKIIAELEEARKEGMQVKT------NQLMDAKG-EFNQLAKQ------- 623
Query: 648 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
EA+ + V + Q G++V V S G + TV + G+ D V G++++
Sbjct: 624 --EANLAKN--KVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHD-YEVSLGRIKL 677
Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 767
+V +I + +++ A A+ R +++SLDLR
Sbjct: 678 KVTDRDIDKLAAGQKQQA----------------------QRRATSASRSSRARSSLDLR 715
Query: 768 GMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 825
G R EEA LD S + +IHG+GTG +++ V + L+ + V Y +P
Sbjct: 716 GQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHVKTYSY-APA 774
Query: 826 NYGCTVAYI 834
N G T A I
Sbjct: 775 NEGGTGATI 783
>gi|431514071|ref|ZP_19516119.1| MutS2 protein [Enterococcus faecium E1634]
gi|430586327|gb|ELB24588.1| MutS2 protein [Enterococcus faecium E1634]
Length = 786
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHALRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGTLRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|424819498|ref|ZP_18244589.1| MutS2 family protein [Enterococcus faecium R501]
gi|402926153|gb|EJX46215.1| MutS2 family protein [Enterococcus faecium R501]
Length = 786
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|417788685|ref|ZP_12436368.1| recombination inhibitory protein MutS2 [Lactobacillus salivarius
NIAS840]
gi|334308862|gb|EGL99848.1| recombination inhibitory protein MutS2 [Lactobacillus salivarius
NIAS840]
Length = 786
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 237/820 (28%), Positives = 378/820 (46%), Gaps = 142/820 (17%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI G LNS E+ A+ R LRA N V + + A D+ + L + +
Sbjct: 79 DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIF 161
L E+ +K+ I+ + D AS L+ IR + + E L+S + ++
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNSYTRGTNSKY- 183
Query: 162 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 221
+ ++T R R + +K ++ GI + SSSG T F+EP VE NN R
Sbjct: 184 ----LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---R 235
Query: 222 LSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L ++AE IL L+ E+A E+ + +D A+A +A + PIL
Sbjct: 236 LRQQQVAEREEINRILEELSEELAPYTHELNNNAKILGMLDFTNAKAKYAHSIKATEPIL 295
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
S ++ V + + HPLL +K V+N
Sbjct: 296 SKENDVY------LRQVWHPLL----------------DMKKAVKN-------------- 319
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
DI + + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ F I
Sbjct: 320 -----DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNI 374
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL
Sbjct: 375 FADIGDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILD 434
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
+ + V TTHY +L + NA+ EF TL+PTYR+L G G SNA +I+
Sbjct: 435 AVGAKGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDIS 494
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASL 571
+ +G D+ I+ A++L + +E+ L+ +R E + R A L
Sbjct: 495 QRLGLDKMIVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEEL 549
Query: 572 HAEIMDLYREIEDEAKDLDRRA---AHLKAKETQQVQQEL--NFAKVQIDTVVQDFENQL 626
H ++ + + E + +++ +A A+ +ET++ EL K+++ E L
Sbjct: 550 HHDLETNFHQFERQKENMLEQAKERANQIVEETKKKSNELISELRKMKMSAASNIEEGSL 609
Query: 627 RDASADEINSLIKESESAIAAIV-------EAHRPDDDFSVSETNTSSFTPQFGEQVHVK 679
DA +N+L +E+ ++ E H P+DD V V
Sbjct: 610 IDAQG-RVNALHQETNLKKNKVLRKAKQQQELH-PNDD------------------VMVN 649
Query: 680 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 739
S G + V+ + VQ G +++++ ++++ I K + +
Sbjct: 650 SYGQR--GVLLRKAGNHAWEVQLGILKMKIDESDLEKIK--------------VKDTQPK 693
Query: 740 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGM 797
++G+ S+ + P +LDLRG R E A ++D I A + + +IHG
Sbjct: 694 RAGAVLKSSSSSHVSP-------TLDLRGERYENAMVKVDRYIDAAVLAGYNSVTIIHGK 746
Query: 798 GTGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 835
GTG ++ ++ L+ + V +E SP N G TV Y K
Sbjct: 747 GTGALRTGIINYLKQNKAVKNFEFASPNNGGNGATVVYFK 786
>gi|417810043|ref|ZP_12456724.1| DNA mismatch repair protein [Lactobacillus salivarius GJ-24]
gi|335350967|gb|EGM52463.1| DNA mismatch repair protein [Lactobacillus salivarius GJ-24]
Length = 786
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 237/820 (28%), Positives = 378/820 (46%), Gaps = 142/820 (17%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI G LNS E+ A+ R LRA N V + + A D+ + L + +
Sbjct: 79 DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIF 161
L E+ +K+ I+ + D AS L+ IR + + E L+S + ++
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNSYTRGTNSKY- 183
Query: 162 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 221
+ ++T R R + +K ++ GI + SSSG T F+EP VE NN R
Sbjct: 184 ----LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---R 235
Query: 222 LSNSEIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L ++AE IL L+ E+A E+ + +D A+A +A + PIL
Sbjct: 236 LRQQQVAEREEINRILEELSEELAPYTHELNNNAKILGMLDFTNAKAKYAHSIKATEPIL 295
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
S ++ V + + HPLL +K V+N
Sbjct: 296 SKENDVY------LRQVWHPLL----------------DMKKAVKN-------------- 319
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
DI + + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ F I
Sbjct: 320 -----DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFGNI 374
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
ADIGD QS+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL
Sbjct: 375 FADIGDEQSIEQSLSTFSSHMTNIVEILKDIDEKSLVLFDELGAGTDPQEGAALAISILD 434
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
+ + V TTHY +L + NA+ EF + TL+PTYR+L G G SNA +I+
Sbjct: 435 AVGAKGSYVVATTHYPELKAYGFERPNTINASMEFDVNTLQPTYRLLIGIPGRSNAFDIS 494
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQA-------RTAASL 571
+ +G D+ I+ A++L + +E+ L+ +R E + R A L
Sbjct: 495 QRLGLDKMIVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEITYRKYLREAEEL 549
Query: 572 HAEIMDLYREIEDEAKDLDRRA---AHLKAKETQQVQQEL--NFAKVQIDTVVQDFENQL 626
H ++ + + E + +++ +A A+ +ET++ EL K+++ V E L
Sbjct: 550 HHDLEANFHQFERQKENMLEQAKEKANQIVEETKKKSDELISELRKMKMSAVSNIEEKNL 609
Query: 627 RDASADEINSLIKESESAIAAIV-------EAHRPDDDFSVSETNTSSFTPQFGEQVHVK 679
D +N+L +E+ ++ E H P+DD V V
Sbjct: 610 IDVQG-RVNALHQETNLKKNKVLRKAKKQQELH-PNDD------------------VMVN 649
Query: 680 SLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDR 739
S G + V+ + VQ G +++++ ++++ I K + +
Sbjct: 650 SYGQR--GVLLRKAGNHAWEVQLGILKMKIDESDLEKIK--------------VKDTQPK 693
Query: 740 QSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGM 797
++G+ S+ + P +LDLRG R E A +D I A + + +IHG
Sbjct: 694 RAGTVLKSSSSSHVSP-------TLDLRGERYENAMVNVDRYIDAAVLAGYNSVTIIHGK 746
Query: 798 GTGVVKERVLEILRNHPRVAKYEQESPMN--YGCTVAYIK 835
GTG ++ ++ L+ + V +E SP N G TV Y K
Sbjct: 747 GTGALRTGIINYLKQNKAVKNFEFASPNNGGNGATVVYFK 786
>gi|114566635|ref|YP_753789.1| recombination and DNA strand exchange inhibitor protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|114337570|gb|ABI68418.1| recombination and DNA strand exchange inhibitor protein
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
Length = 782
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/806 (26%), Positives = 376/806 (46%), Gaps = 100/806 (12%)
Query: 24 LNQTSAAL-AMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L++T A+ AM S+P L ++ + L G +LSP+ + + L + V K
Sbjct: 49 LDETGEAMEAMRFSEPAFLYGLKLVDSQLAKVKVGGILSPAGLREIYHILNSSRQVQKLF 108
Query: 83 TEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE- 141
+Y L L + LE +I + + + D AS +L+ +R +
Sbjct: 109 AAG---------KYPRLFYLSSKIAEVKGLENEINNAVSEEAEL-KDDASPELKSLRGQI 158
Query: 142 ---RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R R L ++ Q + + L+T+R R V I+ ++ + GI +
Sbjct: 159 NTLRLRIRNYLQEFIRSPDTQKW----LQDSLVTEREGRYVVPIRQEFRHEV-RGIIHDE 213
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEI 258
S+SGAT F+EP VE NN L E E IL L+ + + EI + + E
Sbjct: 214 SASGATVFIEPAAVVENNNRIRALQREEKREVERILRKLSEAVGQYRVEIAGNQEILSEF 273
Query: 259 DLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPL 318
D +ARA A D P ++++ + +HPLL
Sbjct: 274 DFIYARARLAYQGDYYRPEINARGILEISRG------RHPLL------------------ 309
Query: 319 KSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMS 378
VP+DI++ + V+VITGPNTGGKT ++KT+GL +LM+
Sbjct: 310 ------------------GQDAVPLDIRLGSDFDVLVITGPNTGGKTVALKTVGLLTLMA 351
Query: 379 KAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLID 438
+GL++PA+ + R+ F + DIGD QS+EQ+LSTFS H++ I+ ILE +ESLVL+D
Sbjct: 352 LSGLFIPARENSRISVFKKLFVDIGDEQSIEQSLSTFSSHMTNIIAILEKADKESLVLMD 411
Query: 439 EIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETL 498
E+G+GTDP+EG ALA IL+ L + ++TTH ++L + R +NA+ EF+ +L
Sbjct: 412 EVGAGTDPAEGAALARVILEELMRKCSRVILTTHQSELKYFAYQRERVKNASVEFNPVSL 471
Query: 499 RPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEER 558
+PTY++ G G SNAL IA +G +++Q+A++L+ R++ + + L E +
Sbjct: 472 QPTYKLSIGMPGQSNALEIASRLGLKTELVQQARQLL-----PRREMEIGNMIRHLKESQ 526
Query: 559 RKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV 618
++E + L AE+ + + +E + + ++ + K + ++ L K + +T
Sbjct: 527 SQVEKSQQEVEKLLAELRENKQSLEQDRESFEQEKTEVMEKSRLEAERYLREIKREANTA 586
Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRP---DDDFSVSETNTSSFTPQFGEQ 675
+++F+ +++ ++++ I I + P + D+ V+ + G+
Sbjct: 587 IEEFKELMKEKEKPPKWHEVEQARQKIRQI-KVDFPGEIEKDYGVNPPKIKA-----GDY 640
Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
V ++++ K VVE P + V+VQ G +++ V + + P
Sbjct: 641 VTIRNIKQK-GYVVEGPNNQGEVVVQVGILKLNVNQEQLSP------------------- 680
Query: 736 QEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFV 793
++ S + + +T +D+RG E+A + +D L A + +
Sbjct: 681 --SQEKEEIISHRRHQGFLEKARTISKEIDVRGQLAEDALYIVDKYLEDANLLGLDSVRI 738
Query: 794 IHGMGTGVVKERVLEILRNHPRVAKY 819
IHG GTG ++ V L++H V Y
Sbjct: 739 IHGKGTGALRTAVRHYLKDHRYVKSY 764
>gi|69245126|ref|ZP_00603250.1| MutS 2 protein [Enterococcus faecium DO]
gi|257879660|ref|ZP_05659313.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
gi|257890326|ref|ZP_05669979.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
gi|260559678|ref|ZP_05831858.1| DNA mismatch repair protein MutS [Enterococcus faecium C68]
gi|293560080|ref|ZP_06676584.1| MutS2 family protein [Enterococcus faecium E1162]
gi|294614397|ref|ZP_06694313.1| MutS2 family protein [Enterococcus faecium E1636]
gi|314938141|ref|ZP_07845446.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a04]
gi|314943818|ref|ZP_07850553.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133C]
gi|314949777|ref|ZP_07853087.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0082]
gi|314951185|ref|ZP_07854243.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133A]
gi|314994416|ref|ZP_07859700.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133B]
gi|314995612|ref|ZP_07860706.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a01]
gi|383329426|ref|YP_005355310.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium Aus0004]
gi|389869286|ref|YP_006376709.1| MutS family DNA mismatch repair protein [Enterococcus faecium DO]
gi|415898673|ref|ZP_11551403.1| MutS2 family protein [Enterococcus faecium E4453]
gi|424789896|ref|ZP_18216506.1| MutS2 family protein [Enterococcus faecium V689]
gi|424912749|ref|ZP_18336124.1| MutS2 family protein [Enterococcus faecium R497]
gi|424955437|ref|ZP_18370273.1| MutS2 family protein [Enterococcus faecium R494]
gi|424964246|ref|ZP_18378359.1| MutS2 family protein [Enterococcus faecium P1190]
gi|424970080|ref|ZP_18383617.1| MutS2 family protein [Enterococcus faecium P1139]
gi|424974783|ref|ZP_18387998.1| MutS2 family protein [Enterococcus faecium P1137]
gi|424978200|ref|ZP_18391145.1| MutS2 family protein [Enterococcus faecium P1123]
gi|424980291|ref|ZP_18393093.1| MutS2 family protein [Enterococcus faecium ERV99]
gi|424983595|ref|ZP_18396176.1| MutS2 family protein [Enterococcus faecium ERV69]
gi|424987917|ref|ZP_18400268.1| MutS2 family protein [Enterococcus faecium ERV38]
gi|424991796|ref|ZP_18403927.1| MutS2 family protein [Enterococcus faecium ERV26]
gi|425007017|ref|ZP_18418168.1| MutS2 family protein [Enterococcus faecium ERV1]
gi|425016051|ref|ZP_18426638.1| MutS2 family protein [Enterococcus faecium E417]
gi|425021060|ref|ZP_18431339.1| MutS2 family protein [Enterococcus faecium C497]
gi|425024153|ref|ZP_18434239.1| MutS2 family protein [Enterococcus faecium C1904]
gi|425035142|ref|ZP_18439993.1| MutS2 family protein [Enterococcus faecium 514]
gi|425039209|ref|ZP_18443767.1| MutS2 family protein [Enterococcus faecium 513]
gi|425041479|ref|ZP_18445872.1| MutS2 family protein [Enterococcus faecium 511]
gi|425046563|ref|ZP_18450570.1| MutS2 family protein [Enterococcus faecium 510]
gi|425049153|ref|ZP_18453021.1| MutS2 family protein [Enterococcus faecium 509]
gi|425060412|ref|ZP_18463707.1| MutS2 family protein [Enterococcus faecium 503]
gi|430831133|ref|ZP_19449186.1| MutS2 protein [Enterococcus faecium E0333]
gi|430852078|ref|ZP_19469813.1| MutS2 protein [Enterococcus faecium E1258]
gi|431003613|ref|ZP_19488711.1| MutS2 protein [Enterococcus faecium E1578]
gi|431251925|ref|ZP_19503983.1| MutS2 protein [Enterococcus faecium E1623]
gi|431755260|ref|ZP_19543914.1| MutS2 protein [Enterococcus faecium E2883]
gi|431771238|ref|ZP_19559624.1| MutS2 protein [Enterococcus faecium E1644]
gi|431772678|ref|ZP_19561016.1| MutS2 protein [Enterococcus faecium E2369]
gi|68195969|gb|EAN10402.1| MutS 2 protein [Enterococcus faecium DO]
gi|257813888|gb|EEV42646.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
gi|257826686|gb|EEV53312.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
gi|260074346|gb|EEW62668.1| DNA mismatch repair protein MutS [Enterococcus faecium C68]
gi|291592705|gb|EFF24298.1| MutS2 family protein [Enterococcus faecium E1636]
gi|291605947|gb|EFF35377.1| MutS2 family protein [Enterococcus faecium E1162]
gi|313590200|gb|EFR69045.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a01]
gi|313591188|gb|EFR70033.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133B]
gi|313596664|gb|EFR75509.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133A]
gi|313597542|gb|EFR76387.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133C]
gi|313642488|gb|EFS07068.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0133a04]
gi|313643850|gb|EFS08430.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium TX0082]
gi|364089863|gb|EHM32509.1| MutS2 family protein [Enterococcus faecium E4453]
gi|378939120|gb|AFC64192.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus faecium Aus0004]
gi|388534535|gb|AFK59727.1| MutS family DNA mismatch repair protein [Enterococcus faecium DO]
gi|402921430|gb|EJX41876.1| MutS2 family protein [Enterococcus faecium V689]
gi|402927678|gb|EJX47618.1| MutS2 family protein [Enterococcus faecium R497]
gi|402934061|gb|EJX53454.1| MutS2 family protein [Enterococcus faecium R494]
gi|402947097|gb|EJX65327.1| MutS2 family protein [Enterococcus faecium P1190]
gi|402955532|gb|EJX73054.1| MutS2 family protein [Enterococcus faecium P1137]
gi|402962705|gb|EJX79623.1| MutS2 family protein [Enterococcus faecium P1139]
gi|402962932|gb|EJX79835.1| MutS2 family protein [Enterococcus faecium P1123]
gi|402966828|gb|EJX83433.1| MutS2 family protein [Enterococcus faecium ERV99]
gi|402971214|gb|EJX87503.1| MutS2 family protein [Enterococcus faecium ERV69]
gi|402973400|gb|EJX89529.1| MutS2 family protein [Enterococcus faecium ERV38]
gi|402975823|gb|EJX91752.1| MutS2 family protein [Enterococcus faecium ERV26]
gi|402993517|gb|EJY08117.1| MutS2 family protein [Enterococcus faecium E417]
gi|402995904|gb|EJY10320.1| MutS2 family protein [Enterococcus faecium ERV1]
gi|403007752|gb|EJY21300.1| MutS2 family protein [Enterococcus faecium C497]
gi|403007864|gb|EJY21411.1| MutS2 family protein [Enterococcus faecium C1904]
gi|403017153|gb|EJY29929.1| MutS2 family protein [Enterococcus faecium 513]
gi|403018752|gb|EJY31412.1| MutS2 family protein [Enterococcus faecium 514]
gi|403024013|gb|EJY36210.1| MutS2 family protein [Enterococcus faecium 510]
gi|403025767|gb|EJY37812.1| MutS2 family protein [Enterococcus faecium 511]
gi|403028786|gb|EJY40587.1| MutS2 family protein [Enterococcus faecium 509]
gi|403042608|gb|EJY53554.1| MutS2 family protein [Enterococcus faecium 503]
gi|430482004|gb|ELA59145.1| MutS2 protein [Enterococcus faecium E0333]
gi|430542660|gb|ELA82768.1| MutS2 protein [Enterococcus faecium E1258]
gi|430561702|gb|ELB00956.1| MutS2 protein [Enterococcus faecium E1578]
gi|430578351|gb|ELB16903.1| MutS2 protein [Enterococcus faecium E1623]
gi|430617260|gb|ELB54134.1| MutS2 protein [Enterococcus faecium E2883]
gi|430633763|gb|ELB69917.1| MutS2 protein [Enterococcus faecium E1644]
gi|430637757|gb|ELB73756.1| MutS2 protein [Enterococcus faecium E2369]
Length = 786
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|293568794|ref|ZP_06680108.1| MutS2 family protein [Enterococcus faecium E1071]
gi|430819495|ref|ZP_19438147.1| MutS2 protein [Enterococcus faecium E0045]
gi|430834320|ref|ZP_19452327.1| MutS2 protein [Enterococcus faecium E0679]
gi|431149562|ref|ZP_19499420.1| MutS2 protein [Enterococcus faecium E1620]
gi|431230237|ref|ZP_19502440.1| MutS2 protein [Enterococcus faecium E1622]
gi|431301457|ref|ZP_19507776.1| MutS2 protein [Enterococcus faecium E1626]
gi|431764575|ref|ZP_19553112.1| MutS2 protein [Enterococcus faecium E4215]
gi|291588511|gb|EFF20345.1| MutS2 family protein [Enterococcus faecium E1071]
gi|430440567|gb|ELA50814.1| MutS2 protein [Enterococcus faecium E0045]
gi|430485551|gb|ELA62457.1| MutS2 protein [Enterococcus faecium E0679]
gi|430574223|gb|ELB13001.1| MutS2 protein [Enterococcus faecium E1622]
gi|430575451|gb|ELB14167.1| MutS2 protein [Enterococcus faecium E1620]
gi|430580647|gb|ELB19114.1| MutS2 protein [Enterococcus faecium E1626]
gi|430630715|gb|ELB67064.1| MutS2 protein [Enterococcus faecium E4215]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|148543773|ref|YP_001271143.1| MutS2 family protein [Lactobacillus reuteri DSM 20016]
gi|184153179|ref|YP_001841520.1| DNA mismatch repair protein [Lactobacillus reuteri JCM 1112]
gi|227363247|ref|ZP_03847379.1| MutS family DNA mismatch repair protein [Lactobacillus reuteri
MM2-3]
gi|325682145|ref|ZP_08161663.1| DNA mismatch repair protein MutS [Lactobacillus reuteri MM4-1A]
gi|148530807|gb|ABQ82806.1| MutS2 family protein [Lactobacillus reuteri DSM 20016]
gi|183224523|dbj|BAG25040.1| DNA mismatch repair protein [Lactobacillus reuteri JCM 1112]
gi|227071703|gb|EEI09994.1| MutS family DNA mismatch repair protein [Lactobacillus reuteri
MM2-3]
gi|324978789|gb|EGC15738.1| DNA mismatch repair protein MutS [Lactobacillus reuteri MM4-1A]
Length = 791
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 200/679 (29%), Positives = 328/679 (48%), Gaps = 90/679 (13%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P++T R R + + A ++ G+ + S+SG T ++EP VE NN RL ++I
Sbjct: 187 PIVTMRNDRYVIPVIARYRNKF-GGVVHDQSASGQTLYIEPAAVVETNN---RLRQAQIE 242
Query: 229 EETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E +L L+ IA +I + +D A+A +A P+LS ++HVS
Sbjct: 243 ERQEMQRVLIELSQMIAPYRHDIGQNEAILGHLDFINAKARWAHDTKATLPLLSKENHVS 302
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
+ +HPL+ +P + V DI
Sbjct: 303 LRKA------RHPLI---------------DPQRV--------------------VTNDI 321
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
K+ + + ++ITGPNTGGKT ++KTLG+ LM ++GL++PA+ + FD + ADIGD
Sbjct: 322 KIGEDYQAIIITGPNTGGKTITLKTLGIIQLMGQSGLFIPAEEGSTIGIFDNVFADIGDE 381
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QSLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA +IL + +
Sbjct: 382 QSLEQNLSTFSGHMDGVKAILEQITSRSLVLLDELGAGTDPKEGAALAMAILDNIGSKGT 441
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ V+TTHY +L + NA+ EF ETL+PTY++L G G SN L IA+ +G
Sbjct: 442 MVVITTHYPELKVYGYDRAKTINASMEFDQETLKPTYKLLLGIPGRSNGLEIAQRLGISL 501
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
++I A+ V + + L+E+R+K ++ A L A+ + R+++++
Sbjct: 502 QVIDEARTFV-----SDNSQDLNNMIGDLVEQRKKAREESEKLAKLVAKNEKVQRDLDEK 556
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESA 644
+ + L + + +++ AK + D ++ +++ + N LI +++
Sbjct: 557 LTRFNEQRDKLYEQARSKANHQVSMAKKKADRIIHHLRQLEVQQGGNVKENELI-DAQGQ 615
Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
+ A+ + SV + G+ V VKS G + ++ G+ VQ G
Sbjct: 616 LNALHHDNPRLQHNSVLQRAKQKHDLHKGDAVLVKSYG-QYGELLSKRGNHKWE-VQIGI 673
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR-----VQT 759
+++ + +NN+ + A PR ++A PR QT
Sbjct: 674 LKMEIDENNLEKV-------AKKDLPR----------------EKDAKRRPRAAVRTTQT 710
Query: 760 SKNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
K S LDLRG R E+A +L I A + S + +IHG GTG +++ + L+++PR
Sbjct: 711 RKTSARLDLRGHRYEQAMSELSNFIDHALLNNLSTVTIIHGKGTGALRKGTQQYLQSNPR 770
Query: 816 VAKYEQESPMNYGCTVAYI 834
V + SP N G A I
Sbjct: 771 VKSFSYASP-NAGGDGATI 788
>gi|257883965|ref|ZP_05663618.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
gi|257819803|gb|EEV46951.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMS 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|430855305|ref|ZP_19473014.1| MutS2 protein [Enterococcus faecium E1392]
gi|430547311|gb|ELA87247.1| MutS2 protein [Enterococcus faecium E1392]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|431414518|ref|ZP_19512337.1| MutS2 protein [Enterococcus faecium E1630]
gi|431759732|ref|ZP_19548343.1| MutS2 protein [Enterococcus faecium E3346]
gi|430589251|gb|ELB27396.1| MutS2 protein [Enterococcus faecium E1630]
gi|430625913|gb|ELB62516.1| MutS2 protein [Enterococcus faecium E3346]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGVVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|427396578|ref|ZP_18889337.1| MutS2 protein [Enterococcus durans FB129-CNAB-4]
gi|431638661|ref|ZP_19523288.1| MutS2 protein [Enterococcus faecium E1904]
gi|447912185|ref|YP_007393597.1| Recombination inhibitory protein MutS2 [Enterococcus faecium NRRL
B-2354]
gi|425723248|gb|EKU86139.1| MutS2 protein [Enterococcus durans FB129-CNAB-4]
gi|430602140|gb|ELB39719.1| MutS2 protein [Enterococcus faecium E1904]
gi|445187894|gb|AGE29536.1| Recombination inhibitory protein MutS2 [Enterococcus faecium NRRL
B-2354]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|430835419|ref|ZP_19453409.1| MutS2 protein [Enterococcus faecium E0680]
gi|430489410|gb|ELA66024.1| MutS2 protein [Enterococcus faecium E0680]
Length = 786
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVRAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|438001664|ref|YP_007271407.1| Recombination inhibitory protein MutS2 [Tepidanaerobacter
acetatoxydans Re1]
gi|432178458|emb|CCP25431.1| Recombination inhibitory protein MutS2 [Tepidanaerobacter
acetatoxydans Re1]
Length = 549
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 273/516 (52%), Gaps = 55/516 (10%)
Query: 23 LLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
L +TS LA++ S + L I+DI LN A G +LSP E+ + T+RA +
Sbjct: 46 LQRETSEGLALLNSGIKISLRGIKDIRNSLNLAKLGSVLSPGELLDIASTMRAARLIKSA 105
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI--DCKLLIILDRASEDLELIR 139
E D + E++ + LEEKI I D + I D AS L IR
Sbjct: 106 WNEKKPADSVIIN------EIVNGLHIFQSLEEKIEKAIVSDEE---IADNASPKLSSIR 156
Query: 140 AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVS 199
++K +++ + L ++ + + + P++T R+ R V +K + + G+ + S
Sbjct: 157 RQKKNLAQSIRNKLNEIISSPYYQKALQDPIVTVRQDRYVVPVKQEFRGSI-QGVIHDQS 215
Query: 200 SSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEID 259
+SGAT ++EP ++ NN +L E E IL + ++ ++ I + + +D
Sbjct: 216 ASGATLYIEPMAVMQMNNELRQLEIEEKKEIERILWDFSKKVQENYDFIHDTLYGLAHLD 275
Query: 260 LAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLK 319
A+AG++ + G PI +++ +++ I+G +HPLL G
Sbjct: 276 FIMAKAGYSLDIKGTEPIFNNRGYINI-----IQG-RHPLLKGEV--------------- 314
Query: 320 SDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSK 379
VP+D+ + E +++ITGPNTGGKT ++KT+GL LM++
Sbjct: 315 ---------------------VPLDVYLGDEFNILIITGPNTGGKTVALKTVGLFILMAQ 353
Query: 380 AGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDE 439
+GL+LPA+ + F+ + ADIGD QS+EQ+LSTFS H+ I +IL+L +++SL+++DE
Sbjct: 354 SGLHLPAQEGTEVSIFEDVFADIGDEQSIEQSLSTFSSHMKNIKEILDLATKDSLIILDE 413
Query: 440 IGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLR 499
+G+GTDP+EG ALA +IL YL ++ + TTHY++L ENA+ EF ++TL
Sbjct: 414 LGAGTDPTEGAALAMAILNYLYEKGSRVLATTHYSELKTFAFSKEGVENASMEFDIQTLS 473
Query: 500 PTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV 535
PTYR+ G G SNA IAK +G ++++ + L+
Sbjct: 474 PTYRLTIGIPGKSNAFEIAKRLGLKQEVVDLGKSLM 509
>gi|313124256|ref|YP_004034515.1| muts family ATPase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312280819|gb|ADQ61538.1| MutS family ATPase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
Length = 787
Score = 254 bits (649), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 228/726 (31%), Positives = 346/726 (47%), Gaps = 108/726 (14%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
+LD AS DL +R R + + +K+ A G + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMTAYTKGKNGEYLSDQIVTIRDDRYVIPVKQ 204
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMEAIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
IV I++ VS +SLVLIDEIG+GTDP EG LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGACLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVAGAEKLMSSDDS 518
Query: 541 ERQQHRKSELYQS---LMEERRKLESQARTAASLHAEI---MDLYREIEDEAKD--LDR- 591
+ H EL + + E ++KL++ A L ++ +D+Y + + D LDR
Sbjct: 519 DI-NHMIDELNKQTKLVTENKQKLQTSLDRAKQLEKKLQDALDIYNQRVQKQLDFALDRA 577
Query: 592 -RAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE 650
K K+ ++ EL A+ + +Q NQL DA E N L K+ E
Sbjct: 578 NEIVAKKRKKADKIIAELEEARKE---GMQAKTNQLMDAKG-EFNQLAKQ---------E 624
Query: 651 AHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVK 710
A+ + V + Q G++V V S G + TV + G+ D V G+++++V
Sbjct: 625 ANLAKN--KVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHDYE-VSLGRIKLKVT 680
Query: 711 KNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
+I + +++ A A+ R +++SLDLRG R
Sbjct: 681 DRDIDKLAAGQKQQA----------------------QRRATSASRSSRARSSLDLRGQR 718
Query: 771 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYG 828
EEA LD S + +IHG+GTG +++ V + L+ + V Y +P N G
Sbjct: 719 YEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHVKTYSY-APANEG 777
Query: 829 CTVAYI 834
T A I
Sbjct: 778 GTGATI 783
>gi|406580064|ref|ZP_11055285.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD4E]
gi|406584557|ref|ZP_11059584.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD2E]
gi|406590812|ref|ZP_11065162.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD1E]
gi|410936712|ref|ZP_11368575.1| MutS family DNA mismatch repair protein [Enterococcus sp. GMD5E]
gi|404454651|gb|EKA01563.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD4E]
gi|404463909|gb|EKA09484.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD2E]
gi|404468826|gb|EKA13702.1| recombination and DNA strand exchange inhibitor protein
[Enterococcus sp. GMD1E]
gi|410734742|gb|EKQ76660.1| MutS family DNA mismatch repair protein [Enterococcus sp. GMD5E]
Length = 786
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KHEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKDHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|256846546|ref|ZP_05552003.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_36A2]
gi|256718315|gb|EEU31871.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_36A2]
Length = 778
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 219/817 (26%), Positives = 379/817 (46%), Gaps = 158/817 (19%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L E + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSRL--------DELGKYKQLRETIGNIPNLRVIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR ++ L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKR----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL +T + ++ +I + ++V+ +D+ A++ +A D C I + VS +++
Sbjct: 248 ILLRITELLRNNKDDILTIGEKVMYLDILNAKSIYAN--DNKCEIPT----VSNREILSL 301
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
E +HP + D VP+ ++ +
Sbjct: 302 EKARHPFI-----------------------------------DKDKVVPLTFEIGKDYD 326
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+L
Sbjct: 327 ILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQSL 386
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
S+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TTH
Sbjct: 387 SSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITTH 446
Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA- 531
Y+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 447 YSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKAR 506
Query: 532 ----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE-----I 575
+K++E ++ + Q+ E + L EE R +A+ + + I
Sbjct: 507 AYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEARIDRERAKQETLIIEKQKNEII 566
Query: 576 MDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFENQL 626
Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 567 KSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM---------------- 610
Query: 627 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLA 686
+++ ++E ++ +V+ + +F V G++V VKS+ ++ A
Sbjct: 611 -------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQFA 650
Query: 687 TVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPRLRKQQEDRQSG 742
++++ ++ VQ G +++ V + I+ + K K N +P
Sbjct: 651 NILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEKVYNMNTHKKSP------------ 698
Query: 743 SAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTG 800
++ +DLRG V+EA ++L+ L A + +++IHG GTG
Sbjct: 699 -----------------VRSEIDLRGKMVDEAIYELETYLDRATLNGYTEVYIIHGKGTG 741
Query: 801 VVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
++E +L+ L+ V +Y GCTV +K
Sbjct: 742 ALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|422933743|ref|ZP_16966518.1| DNA mismatch repair protein MutS, partial [Fusobacterium nucleatum
subsp. animalis ATCC 51191]
gi|339891359|gb|EGQ80350.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 797
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 223/819 (27%), Positives = 383/819 (46%), Gaps = 162/819 (19%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V ++K L D L +Y L E + N L +E+ I
Sbjct: 101 GTYLEVEELWDINVNLRTVR-IFK-------LRLDELGKYKQLRETIGNIPNLRLIEDVI 152
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 153 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQERIIT 207
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 208 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 266
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A P +S++ +S + +
Sbjct: 267 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENRCEIPTVSNREILSLEKA-- 323
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+HP + D VP+ ++ +
Sbjct: 324 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 344
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 345 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 404
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 405 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 464
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 465 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 524
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R L+ + +L E
Sbjct: 525 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 583
Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 584 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 629
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 630 ---------LSTALREEKNKTVEVVKKIKTKINFKV------------GDRVFVKSI-NQ 667
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPRLRKQQEDRQ 740
A ++++ ++ +VQ G +++ V + I+ + K K N P
Sbjct: 668 FANILKINTSKESAMVQAGILKLEVPFDEIKIVEEKKEKVYNMNTHKKTP---------- 717
Query: 741 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMG 798
++ +DLRG V+EA ++L+ L A + ++VIHG G
Sbjct: 718 -------------------VRSEIDLRGKMVDEAVYELETYLDRATLNGYTEVYVIHGKG 758
Query: 799 TGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
TG ++E +L+ L+ V +Y GCTV +K
Sbjct: 759 TGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 797
>gi|430847896|ref|ZP_19465729.1| MutS2 protein [Enterococcus faecium E1133]
gi|430849196|ref|ZP_19466977.1| MutS2 protein [Enterococcus faecium E1185]
gi|431748902|ref|ZP_19537654.1| MutS2 protein [Enterococcus faecium E2297]
gi|430536272|gb|ELA76648.1| MutS2 protein [Enterococcus faecium E1133]
gi|430538042|gb|ELA78341.1| MutS2 protein [Enterococcus faecium E1185]
gi|430612427|gb|ELB49467.1| MutS2 protein [Enterococcus faecium E2297]
Length = 786
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRYFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|19704902|ref|NP_602397.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|81763629|sp|Q8RIK8.1|MUTS2_FUSNN RecName: Full=MutS2 protein
gi|19712795|gb|AAL93696.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 778
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 221/815 (27%), Positives = 387/815 (47%), Gaps = 154/815 (18%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L E++ N L +E+ I
Sbjct: 82 GTYLEVEELWNINVNLRTVRIFKSRL--------DELGKYKQLREMIGNIPNLRVIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A ++ C I + VS ++
Sbjct: 248 IL-LRIAELLRNNKDDILIIGEKVMYLDILNAKSIYA--VENRCEIPT----VSNKEILS 300
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+E +HP + D P+ ++ +
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVTPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R L+ + +L E
Sbjct: 506 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564
Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
A ++++ ++ +VQ G +++ V + I+ + E+++
Sbjct: 649 FANILKINTSKESAMVQSGILKLEVPFDEIKIV-------------------EEKKEKVY 689
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
+N + + ++ +DLRG V+EA ++L+ L A + ++VIHG GTG +
Sbjct: 690 NVNNHKKT------PVRSEIDLRGKMVDEAVYELETYLDRATLNGYTEVYVIHGKGTGAL 743
Query: 803 KERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+E +L+ L+ V +Y GCTV +K
Sbjct: 744 REGILKYLKACKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|418036209|ref|ZP_12674639.1| hypothetical protein LDBUL1519_01339 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354688558|gb|EHE88595.1| hypothetical protein LDBUL1519_01339 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 787
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 226/738 (30%), Positives = 346/738 (46%), Gaps = 132/738 (17%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLHLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
+ H EL + + + E++ + SL D AK L+++
Sbjct: 519 DI-NHMIDELNK---QTKLATENKQKQQTSL------------DRAKQLEKKLQDALDIY 562
Query: 601 TQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEINSLI 638
Q+VQ++L+FA + + D ++ + E NQL DA E N L
Sbjct: 563 NQRVQKQLDFALDRANEIVAKKRKKADKIIAELEEARKEGMQVKTNQLMDAKG-EFNQLA 621
Query: 639 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 698
K+ EA+ + V + Q G++V V S G + TV + G+ D
Sbjct: 622 KQ---------EANLAKN--KVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHDYE 669
Query: 699 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 758
V G+++++V +I + +++ A A+ R
Sbjct: 670 -VSLGRIKLKVTDRDIDKLAAGQKQQA----------------------QRRATSASRSS 706
Query: 759 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
+++SLDLRG R EEA LD S + +IHG+GTG +++ V + L+ + V
Sbjct: 707 RARSSLDLRGQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHV 766
Query: 817 AKYEQESPMNYGCTVAYI 834
Y +P N G T A I
Sbjct: 767 KTYSY-APANEGGTGATI 783
>gi|296327726|ref|ZP_06870266.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
gi|296155164|gb|EFG95941.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
nucleatum ATCC 23726]
Length = 778
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 221/815 (27%), Positives = 387/815 (47%), Gaps = 154/815 (18%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L E++ N L +E+ I
Sbjct: 82 GTYLEVEELWNINVNLRTVRIFKSRL--------DELGKYKQLREMIGNIPNLRVIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A ++ C I + VS ++
Sbjct: 248 IL-LRIAELLRNNKDDILIIGEKVMYLDILNAKSIYA--VENRCEIPT----VSNKEILS 300
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+E +HP + D P+ ++ +
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVTPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R L+ + +L E
Sbjct: 506 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564
Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
A ++++ ++ +VQ G +++ V + I+ + E+++
Sbjct: 649 FANILKINTSKESAMVQSGILKLEVPFDEIKIV-------------------EEKKEKVY 689
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
+N + + ++ +DLRG V+EA ++L+ L A + ++VIHG GTG +
Sbjct: 690 NVNNHKKT------PVRSEIDLRGKMVDEAVYELETYLDRATLNGYTEVYVIHGKGTGAL 743
Query: 803 KERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+E +L+ L+ V +Y GCTV +K
Sbjct: 744 REGILKYLKACKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|237741375|ref|ZP_04571856.1| DNA mismatch repair protein mutS [Fusobacterium sp. 4_1_13]
gi|229430907|gb|EEO41119.1| DNA mismatch repair protein mutS [Fusobacterium sp. 4_1_13]
Length = 778
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 219/818 (26%), Positives = 381/818 (46%), Gaps = 160/818 (19%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L E + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRIVRIFKSRL--------DELGKYKQLRETIGNIPNLRVIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A PI++++ +S + +
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENKCEIPIVNNKEILSLEKA-- 304
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+HP + D VP+ ++ +
Sbjct: 305 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R +A+ + +
Sbjct: 506 RAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEARIDRERAKQETLIIEKQKNEI 565
Query: 575 IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFENQ 625
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 566 IKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM--------------- 610
Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 611 --------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQF 649
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPRLRKQQEDRQS 741
A ++++ ++ VQ G +++ V + I+ + K K N +P
Sbjct: 650 ANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEKVYNMNTHKKSP----------- 698
Query: 742 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 799
++ +DLRG V+EA ++L+ L A + +++IHG GT
Sbjct: 699 ------------------VRSEIDLRGKMVDEAIYELETYLDRATLNGYTEVYIIHGKGT 740
Query: 800 GVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
G ++E +L+ L+ V +Y GCTV +K
Sbjct: 741 GALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|34762391|ref|ZP_00143393.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|27887973|gb|EAA25039.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
Length = 718
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 219/818 (26%), Positives = 381/818 (46%), Gaps = 160/818 (19%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L E + N L +E+ I
Sbjct: 22 GTYLEVEELWDINVNLRIVRIFKSRL--------DELGKYKQLRETIGNIPNLRVIEDVI 73
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 74 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 128
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 129 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 187
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A PI++++ +S + +
Sbjct: 188 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENKCEIPIVNNKEILSLEKA-- 244
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+HP + D VP+ ++ +
Sbjct: 245 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 265
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 266 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 325
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 326 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 385
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 386 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 445
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R +A+ + +
Sbjct: 446 RAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEARIDRERAKQETLIIEKQKNEI 505
Query: 575 IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFENQ 625
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 506 IKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM--------------- 550
Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 551 --------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQF 589
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPRLRKQQEDRQS 741
A ++++ ++ VQ G +++ V + I+ + K K N +P
Sbjct: 590 ANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEKVYNMNTHKKSP----------- 638
Query: 742 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 799
++ +DLRG V+EA ++L+ L A + +++IHG GT
Sbjct: 639 ------------------VRSEIDLRGKMVDEAIYELETYLDRATLNGYTEVYIIHGKGT 680
Query: 800 GVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
G ++E +L+ L+ V +Y GCTV +K
Sbjct: 681 GALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 718
>gi|385816182|ref|YP_005852573.1| Mismatch repair protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325126219|gb|ADY85549.1| Mismatch repair protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 787
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 226/738 (30%), Positives = 346/738 (46%), Gaps = 132/738 (17%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
+ H EL + + + E++ + SL D AK L+++
Sbjct: 519 DI-NHMIDELNK---QTKLATENKQKLQTSL------------DRAKQLEKKLQDALDIY 562
Query: 601 TQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEINSLI 638
Q+VQ++L+FA + + D ++ + E NQL DA E N L
Sbjct: 563 NQRVQKQLDFALDRANEIVAKKRKKADKIIAELEEARKEGMQVKTNQLMDAKG-EFNQLA 621
Query: 639 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 698
K+ EA+ + V + Q G++V V S G + TV + G+ D
Sbjct: 622 KQ---------EANLAKN--KVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHDYE 669
Query: 699 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 758
V G+++++V +I + +++ A A+ R
Sbjct: 670 -VSLGRIKLKVTDRDIDKLAAGQKQQA----------------------QRRATSASRSS 706
Query: 759 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
+++SLDLRG R EEA LD S + +IHG+GTG +++ V + L+ + V
Sbjct: 707 RARSSLDLRGQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHV 766
Query: 817 AKYEQESPMNYGCTVAYI 834
Y +P N G T A I
Sbjct: 767 KTYSY-APANEGGTGATI 783
>gi|431374601|ref|ZP_19510289.1| MutS2 protein [Enterococcus faecium E1627]
gi|430583225|gb|ELB21614.1| MutS2 protein [Enterococcus faecium E1627]
Length = 786
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRYFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSEASSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|406837044|ref|ZP_11096638.1| DNA mismatch repair protein [Lactobacillus vini DSM 20605]
Length = 784
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 231/795 (29%), Positives = 378/795 (47%), Gaps = 105/795 (13%)
Query: 51 LNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCN--F 108
+N+A++G+ L+ EI V R+ V + + +L E++ SL + L++
Sbjct: 80 INAALNGKELA--EIAKVLRSAAEVKSFFSQLA-IEEVNLHSLNALANQLQVFPQLTKQL 136
Query: 109 LTELEEKIGFCIDCKL-LIILDRASEDLEL-IRAERKRNMENLDSLLKKVAAQIFQAGGI 166
L LEE D + L + R+ L L +R++ L++L++ +A+ +
Sbjct: 137 LRSLEEDGHLSDDASVKLAAIRRSMSQLRLQLRSQ-------LNALIRGKSAKY-----L 184
Query: 167 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSE 226
+P+IT R R + +K ++ G+ + S+SG T F+EP A++ NN + +E
Sbjct: 185 TEPVITIRDDRYVIPVKQEYRGHF-GGVVHDQSASGQTLFVEPAAALDLNNRLRQRQANE 243
Query: 227 IAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
E IL+ L+A +A +EI + E D A A+A +AQ + P LS
Sbjct: 244 REEIQRILTALSASLAPYVKEIAANAALLGEFDFANAKAKYAQQLKATYPRLS------V 297
Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
D+ + + HPLL N + V + DI
Sbjct: 298 DNQVYLRQAWHPLL-----------------------NEKKVVRN------------DIM 322
Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
+ + + +VITGPNTGGKT ++KTLGL LM ++GL++PA ++ F I ADIGD Q
Sbjct: 323 LGQDYQTMVITGPNTGGKTITLKTLGLIQLMGQSGLFIPAFEDSQIGVFKEIFADIGDEQ 382
Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
S+EQNLSTFS H++ IV+IL + SLVL+DE+G+GTDP EG ALA +IL L
Sbjct: 383 SIEQNLSTFSAHLTNIVEILNNCDQSSLVLLDELGAGTDPQEGAALAVAILDALAALGSY 442
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
V TTHY +L + NA+ EF +TL+PTYR+L G G SNA I++ +G +
Sbjct: 443 VVATTHYPELKAYGYERLSTINASMEFDSQTLQPTYRLLIGIPGQSNAFAISQRLGLSAE 502
Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
II A++L Q +++ Q L+ +R++ E + A E +L+ +++
Sbjct: 503 IIAAARQLT-----SNQSQDLNQMIQDLVRKRQQAEEERARLAKYLTEGQELHHDLQVAF 557
Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--SA 644
+++ AHL + Q ++ A + D ++ + +A+A +KE + +A
Sbjct: 558 NKFEKQKAHLLEQAKLHANQIIDQASQRSDELISELRQMKLNANAS-----VKEDQLITA 612
Query: 645 IAAIVEAHRP---DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
+ E H+P + P G+ V VK D+ T++E G + VQ
Sbjct: 613 KTKMNELHQPLLSKNRVLRKVKLNQQLKP--GDDVLVKPY-DQQGTLLEKTGKHEWE-VQ 668
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G +++++ + N+ I K R+R S+ S+ + P
Sbjct: 669 LGSLKMKIAEGNLEKIKIKPEK------VRIR---------SSFKSSSQVHVSP------ 707
Query: 762 NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
LDLRG R E A +D L A + + +IHG GTG ++E + + L+ + RV +
Sbjct: 708 -VLDLRGQRYETAMTMVDRYLDSALLAGYASVTIIHGKGTGALREGIRQYLQTNRRVKSF 766
Query: 820 EQESPMNYGCTVAYI 834
+P N G A I
Sbjct: 767 G-FAPANAGGDGATI 780
>gi|259502869|ref|ZP_05745771.1| DNA mismatch repair protein MutS [Lactobacillus antri DSM 16041]
gi|259169236|gb|EEW53731.1| DNA mismatch repair protein MutS [Lactobacillus antri DSM 16041]
Length = 790
Score = 253 bits (647), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 223/793 (28%), Positives = 368/793 (46%), Gaps = 119/793 (15%)
Query: 80 KKLTEAAELDGDSLQRYSPLLELLKNC-NFLTELEEKIGFCIDCKLLII---LDR----A 131
K+L A L+G L + + +L+ ++ NF ++ EK KL ++ +DR
Sbjct: 76 KRLKIGANLNGTELAQVAKVLQASRSVQNFFEQMREK-----KIKLRVLEQTVDRLVTIP 130
Query: 132 SEDLELIRA---------ERKRNMENLDSLLKKVAAQIFQ----------AGGIDKPLIT 172
S L+R+ E + + L+ K +I Q A + +P++T
Sbjct: 131 SVTTRLVRSVDPDGRINDEASTKLHGIRQLINKTENEIRQQMAQYTQGKSAKYLSEPIVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + + A ++ G+ + S+SG T ++EP +E NN RL ++I E+
Sbjct: 191 VRNDRFVIPVLARYRNKF-GGVVHDQSASGQTLYIEPGAVMEDNN---RLRQAQIEEKQE 246
Query: 233 ILSLL---TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
+L +L +A I+ +I + +D A+A +A + P+LS+ D+
Sbjct: 247 VLRVLAELSALISPYRHDILNNEQILGHLDFINAKASYAHELKASLPLLSA------DNQ 300
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
+N+ HPL+ D V DIK+
Sbjct: 301 VNLRKAWHPLI-----------------------------------ARDQAVANDIKLGG 325
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ + V+ITGPNTGGKT ++KTLG+ LM +AGL++PA+ + FD + ADIGD QSLE
Sbjct: 326 DYQAVIITGPNTGGKTITLKTLGIIQLMGQAGLFIPAQEGSTIGVFDNVFADIGDEQSLE 385
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
QNLSTFSGH+ + IL+ ++ SLVL+DE+G+GTDP EG ALA +IL + L ++
Sbjct: 386 QNLSTFSGHMENVKAILDQLTARSLVLLDELGAGTDPKEGAALAMAILDEIGQWGSLVMI 445
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L + NA+ EF TL+PTYR+L G G SN L IAK +G II
Sbjct: 446 TTHYPELKVYGYDRAKTINASMEFDQATLQPTYRLLLGIPGRSNGLEIAKRLGIGSAIIG 505
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
AQ LV + + L+E+R++ + A L A+ E+ +
Sbjct: 506 EAQSLV-----SDDSQDLNAMIGDLVEQRKRAREEGDRLAKLVAQNQADQEELNQKLDRF 560
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAI 648
+ + L + Q ++ AK + D ++ +++ + + N LI +++ A+ A+
Sbjct: 561 NEQRDRLLERARSQANHQVAQAKRKADRIIHHLRQLEIQQGAGVKENQLI-DAQGALNAL 619
Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
+ + SV + + G+ V VKS G ++ G+ VQ G +++
Sbjct: 620 HQDNPRLQHNSVLKRAKAKHDLHKGDAVLVKSYGQH-GELLSRRGNHKWE-VQIGILKME 677
Query: 709 VKKNNI-----RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
+ + ++ R +P RK P+ R K + R++ +
Sbjct: 678 IDERDLEKVAKRDLPKDDRK---QPSHRAVKTTQTRKTSA-------------------R 715
Query: 764 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 821
LDLRG R EEA +L I A + + +IHG GTG +++ + L+++PRV +
Sbjct: 716 LDLRGHRYEEAMGELSNFIDHALLNNLGTVTIIHGKGTGALRKGTQQYLQSNPRVKSFSY 775
Query: 822 ESPMNYGCTVAYI 834
+P N G A I
Sbjct: 776 AAP-NAGGDGATI 787
>gi|430946889|ref|ZP_19485669.1| MutS2 protein [Enterococcus faecium E1576]
gi|430558286|gb|ELA97705.1| MutS2 protein [Enterococcus faecium E1576]
Length = 786
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 350/728 (48%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + T++ G+ V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKIFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|422314862|ref|ZP_16396313.1| MutS2 protein [Fusobacterium periodonticum D10]
gi|404593261|gb|EKA94832.1| MutS2 protein [Fusobacterium periodonticum D10]
Length = 778
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 222/828 (26%), Positives = 383/828 (46%), Gaps = 153/828 (18%)
Query: 44 IEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLEL 102
+ +I G+++ + G L E+ + LR V +L D L +Y L +
Sbjct: 68 LRNINGLMDKIKLIGTYLEVEELWDINVNLRTVRVFKARL--------DELGKYKQLRDT 119
Query: 103 LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ 162
+ N L +E+ I I+ + I D AS DL IR +K N+ +++ +
Sbjct: 120 IGNIPNLRMIEDVINKTINPEKEI-KDDASLDLRDIRLHKKTLNMNIKRKFEELFDEPSL 178
Query: 163 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
A + +IT+R RM +K K L+ GI + SSSG T F+EP V NN L
Sbjct: 179 ANAFQERIITERDGRMVTPVKFDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMREL 237
Query: 223 SNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 281
E E IL L AE+ ++ R+ I + D+ L +D+ A++ +A +D C I +
Sbjct: 238 ETKEKEEIRKIL-LRIAELLRNNRDDILAIGDKALYLDILNAKSIYA--VDNKCEIPT-- 292
Query: 282 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
VS +++E +HP + D V
Sbjct: 293 --VSNREVLSLEKARHPFI-----------------------------------DKDKVV 315
Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
P+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + AD
Sbjct: 316 PLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIAIPASENSKIGFFEGVFAD 375
Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
IGD QS+EQ+LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG A A +++ YL
Sbjct: 376 IGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLN 435
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +
Sbjct: 436 EKKAKSFITTHYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRM 495
Query: 522 GFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
G II +A +K++E ++ + Q+ + + +EE +L+ + +
Sbjct: 496 GLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLEEEARLDRERAKQET 555
Query: 571 LHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQI 615
L E I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 556 LIIEKQKNEIIKAAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM----- 610
Query: 616 DTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
+++ ++E ++ +V+ + +F V G++
Sbjct: 611 ------------------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDR 640
Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPR 731
V VKS+ ++ A ++++ ++ VQ G +++ V I+ + K K N P
Sbjct: 641 VFVKSI-NQFANILKINTSKESASVQAGILKLEVPFEEIKIVEEKKEKVYNVNTHKKTP- 698
Query: 732 LRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRS 789
++ +DLRG V+E ++L+ L A +
Sbjct: 699 ----------------------------VRSEIDLRGKMVDEGIYELETYLDRATLNGYT 730
Query: 790 VLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
++VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 731 EVYVIHGKGTGALREGILKYLKTSKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|254302123|ref|ZP_04969481.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|148322315|gb|EDK87565.1| DNA mismatch repair protein MutS [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
Length = 778
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 226/818 (27%), Positives = 378/818 (46%), Gaps = 160/818 (19%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L E + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSRL--------DELGKYKQLRETIGNIPNLRVIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINLEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ +E I + ++V+ +D+ A++ +A D C I + VS ++
Sbjct: 248 IL-LRIAELLRNNKEDILTIGEKVMYLDILNAKSIYAN--DNRCEIPT----VSNREILS 300
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+E +HP + D VP+ ++ +
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVVPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILGAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAA---------- 569
+K++E ++ + Q+ E + L EE R +A+
Sbjct: 506 RAYISEDNKKVEKMIENIKTKSQELDEMRERFVRLQEEARLDRERAKQETLIIEKQKNEI 565
Query: 570 --SLHAEIMDLYREIEDEAKDLDRRAAH-LKAKE-TQQVQQELNFAKVQIDTVVQDFENQ 625
S + E + E+ +A L R H K KE +Q+Q+ LN
Sbjct: 566 IKSAYEEAEKMMNEMRAKASALVERIQHEEKNKEDAKQIQKNLNM--------------- 610
Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
+++ ++E ++ +V+ + DF G++V VKS+ ++
Sbjct: 611 --------LSTALREEKNKTVEVVKKIKTKVDFKA------------GDRVFVKSI-NQF 649
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPRLRKQQEDRQS 741
A ++++ ++ VQ G +++ V + I+ + K K N P
Sbjct: 650 ANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEKVYNVNNHKKTP----------- 698
Query: 742 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 799
++ +DLRG V+EA ++L+ L A + ++VIHG GT
Sbjct: 699 ------------------VRSEIDLRGKMVDEAVYELETYLDRATLNGYTEVYVIHGKGT 740
Query: 800 GVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
G ++E +L+ L+ V +Y GCTV +K
Sbjct: 741 GALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|421527538|ref|ZP_15974138.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum ChDC
F128]
gi|402256316|gb|EJU06798.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum ChDC
F128]
Length = 778
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 223/815 (27%), Positives = 383/815 (46%), Gaps = 154/815 (18%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L E + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSRL--------DELGKYKQLRETIGNIPNLRVVEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ R+ I + ++V+ +D+ A++ +A D C I + VS ++
Sbjct: 248 IL-LRIAELLRNNRDDILTIGEKVMYLDILNAKSIYAN--DNRCEIPT----VSNREILS 300
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+E +HP + D VP+ ++ +
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVVPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILGAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKAKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R L+ + +L E
Sbjct: 506 RAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564
Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
+++ ++E ++ +V+ + DF G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVDFKA------------GDRVFVKSI-NQ 648
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
A ++++ ++ VQ G +++ V + I+ + E+++
Sbjct: 649 FANILKINTSKESASVQAGILKLEVPFDEIKIV-------------------EEKKEKVY 689
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
+N + + ++ +DLRG V+EA ++L+ L A + ++VIHG GTG +
Sbjct: 690 NVNNHKKT------PVRSEIDLRGKMVDEAIYELETYLDRATLNGYTEVYVIHGKGTGAL 743
Query: 803 KERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+E +L+ L+ V +Y GCTV +K
Sbjct: 744 REGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|357237673|ref|ZP_09125014.1| MutS2 family protein [Streptococcus ictaluri 707-05]
gi|356753863|gb|EHI70966.1| MutS2 family protein [Streptococcus ictaluri 707-05]
Length = 778
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 220/726 (30%), Positives = 353/726 (48%), Gaps = 111/726 (15%)
Query: 126 IILDRASEDLELIR----AERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVG 181
I + AS LE IR E + + + L ++KK Q+ + + LI R R +
Sbjct: 142 FIENFASPALEKIRRQIAEEEQASRQMLQDIVKK------QSDYLSEALIASRNGRSVLP 195
Query: 182 IKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEI 241
+K +++ + G+ ++SSSG+T ++EP+ V+ N + +L E E IL L+ +
Sbjct: 196 VKNTYRNKVA-GVVHDISSSGSTVYIEPRALVQMNEVITQLQADERHELVRILRALSDML 254
Query: 242 AKSEREIK---YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHP 298
+++ +L+ L F RA + D I +S D S+++ ++HP
Sbjct: 255 RPYSDQLRNNAWLLGH-----LDFVRAKYYYMRDYKATI----PKISKDKSLHLLSVRHP 305
Query: 299 LLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITG 358
LL + VP D++ E V+VITG
Sbjct: 306 LLTEA-------------------------------------VPNDLQFSKELAVIVITG 328
Query: 359 PNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGH 418
PNTGGKT +KTLGLA LM+++GL + A R+ F+ I ADIGD QS+EQNLSTFS H
Sbjct: 329 PNTGGKTIMLKTLGLAQLMAQSGLPILADKGSRVALFNEIYADIGDEQSIEQNLSTFSSH 388
Query: 419 ISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSC 478
++ IV IL+ ++SLVL DE+G+GTDP EG +LA +IL+ LR + TTHY +L
Sbjct: 389 MTHIVSILDQADQDSLVLFDELGAGTDPQEGASLAMAILEQLRLTSIKTMATTHYPELKA 448
Query: 479 LKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERL 538
+ ENA+ EF L+PTYR + G G SNA IA +G I++ AQ++ +
Sbjct: 449 YGIETDFVENASMEFDSTRLKPTYRFMQGVPGRSNAFEIASRLGLAPHIVKEAQEMTD-- 506
Query: 539 RPERQQHRKSE-LYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLK 597
+ +R E L +E R++LE S+ + + R + K L +H K
Sbjct: 507 -TDSDVNRIIEQLEAQTLESRKRLEH----IKSVEQDNLKFNRAV----KKLYNEFSHAK 557
Query: 598 AKETQQVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRP 654
KE ++ QE A+ +D + + E +L D + + + +I E+++ + +V P
Sbjct: 558 DKELEKASQE---AQEIVDMALTESEAILEKLHDKAELKPHQII-EAKTELKKLV----P 609
Query: 655 DDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
+ + S V + P+ G+ + V + G + V +V D Q G +++ +K+
Sbjct: 610 EPNLSQNKVLKKAKKLRAPRVGDGILVTAYGQRGTLVKQVK--DKKWEAQVGLIKMTLKE 667
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
+ + S+ A +++ SAG GPR + LDLRG R
Sbjct: 668 DEFTLVKTSQEAQTAKKK----TVHVVKKATSAG--------GPRAR-----LDLRGKRY 710
Query: 772 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY-- 827
EEA +LD I A + S + ++HG+GTGV++E V + LR H +V + +P N
Sbjct: 711 EEAMQELDAFIDQALLNNMSQVDIVHGIGTGVIREAVTKYLRRHKQVKSFAY-APQNAGG 769
Query: 828 -GCTVA 832
GCT+A
Sbjct: 770 SGCTIA 775
>gi|346307521|ref|ZP_08849654.1| hypothetical protein HMPREF9457_01363 [Dorea formicigenerans
4_6_53AFAA]
gi|345905454|gb|EGX75193.1| hypothetical protein HMPREF9457_01363 [Dorea formicigenerans
4_6_53AFAA]
Length = 792
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 312/660 (47%), Gaps = 81/660 (12%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R C+ +KA ++ +P G+ + SS+G+T F+EP V+ NN L E
Sbjct: 187 PIITMRGDRYCIPVKAEYRGQVP-GMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQE 245
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+A+ A+ EI+ + E+D FAR A M+ P+ + + +
Sbjct: 246 EIQVILARLSADAAEYVSEIRTDYATLTELDFIFARGALALDMNASKPMFNQERRIRIRE 305
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
+HPLL + VPI + +
Sbjct: 306 G------RHPLLDKKKV-----------------------------------VPISLTLG 324
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ ++++TGPNTGGKT S+KT+GL LM +AGL++PA + L F + ADIGD QS+
Sbjct: 325 GDFDLLIVTGPNTGGKTVSLKTVGLFQLMGQAGLHIPALDRSELGVFREVYADIGDEQSI 384
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQNLSTFS H++ +V ++ V +SLVL DE+G+GTDP+EG ALAT+IL +L + +
Sbjct: 385 EQNLSTFSSHMTNVVSFIKQVDEDSLVLFDELGAGTDPTEGAALATAILNHLHCQGIRTM 444
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA+ EF +ETLRPTYR+L G G SNA IA +G II
Sbjct: 445 ATTHYSELKVYALSTPGVENASCEFDVETLRPTYRLLLGIPGKSNAFAIAGKLGLPDYII 504
Query: 529 QRAQ-KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
+ A+ L E Q +L L RR + + A+ E+ L +E + +
Sbjct: 505 EEAKTHLTE------QDESFEDLLTDLESSRRTIAKEQEEIAAYRRELEALKQETAQKKE 558
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINS----LIKESE 642
L+ + + + ++ L AK D +++F + + SA E+ L K+ E
Sbjct: 559 KLEEQRDRILREANEKAHAILADAKETADETMRNFHKFGKANVSATEMEKERERLRKKME 618
Query: 643 SAIAAIV-EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
+ E +P + S+ + GE V V S+ + TV +P ++VQ
Sbjct: 619 KTREGMTEEVKKPKKQYKPSDF-------KLGETVKVLSM-NLTGTVHSLPDTKGNLMVQ 670
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G + +V +++ + + P K+ R S + S P +
Sbjct: 671 MGILSSKVHISDLEIV---------DEKPAYLKKTAARTSKGKVKMGKSLSVSPEI---- 717
Query: 762 NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+L G V+EA +LD L A + + V+HG GTG ++ + + L+ V Y
Sbjct: 718 ---NLLGKTVDEAVAELDKYLDDASLAHLTSVRVVHGKGTGALRAGIHQYLKRQKHVKSY 774
>gi|194468338|ref|ZP_03074324.1| MutS2 family protein [Lactobacillus reuteri 100-23]
gi|194453191|gb|EDX42089.1| MutS2 family protein [Lactobacillus reuteri 100-23]
Length = 791
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 202/678 (29%), Positives = 331/678 (48%), Gaps = 88/678 (12%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P++T R R + + A ++ G+ + S+SG T ++EP VE NN RL ++I
Sbjct: 187 PIVTMRNDRYVIPVIARYRNKF-GGVVHDQSASGQTLYIEPAAVVETNN---RLRQAQIE 242
Query: 229 EETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E +L L+ IA +I + +D A+A +A P+LS ++HVS
Sbjct: 243 ERQEMQRVLIELSQMIAPYRHDIGQNEAILGHLDFINAKARWAHDTKATLPLLSKENHVS 302
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
+ +HPL+ LR + V DI
Sbjct: 303 LRKA------RHPLI---DLRRV--------------------------------VTNDI 321
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
K+ + + ++ITGPNTGGKT ++KTLG+ LM ++GL++PA+ + FD + ADIGD
Sbjct: 322 KIGEDCQAIIITGPNTGGKTITLKTLGIIQLMGQSGLFIPAEEGSTIGIFDNVFADIGDE 381
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QSLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA +IL + +
Sbjct: 382 QSLEQNLSTFSGHMDGVKAILEQITSRSLVLLDELGAGTDPKEGAALAMAILDNIGSKGT 441
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ V+TTHY +L + NA+ EF ETL+PTY++L G G SN L IA+ +G +
Sbjct: 442 MVVITTHYPELKVYGYDRAKTINASMEFDQETLKPTYKLLLGIPGRSNGLEIAQRLGINP 501
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
++I A+ V + + L+E+R+K ++ A L A+ + R+++++
Sbjct: 502 QVIDEARTFV-----SDDSQDLNNMIGDLVEQRKKAREESERLAKLVAKNEKVQRDLDEK 556
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--S 643
+ + L + + +++ AK + D ++ + LR + + +KE+E
Sbjct: 557 LTRFNEQRDKLYEQARSKANHQVSMAKKKADRII----HHLRQLEVQQGGN-VKENELID 611
Query: 644 AIAAIVEAHRPD---DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
A + HR + + SV + G+ V VKS G + ++ G+ V
Sbjct: 612 AQGQLNALHRDNPRLQNNSVLQRAKQKHDLHKGDAVLVKSYG-QYGELLSKRGNHKWE-V 669
Query: 701 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 760
Q G +++ + +N++ + A P Q++D + + QT
Sbjct: 670 QIGILKMEIDENSLEKV-------AKKDLP----QEKDARRRPRAAVRT-------TQTR 711
Query: 761 KNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
K S LDLRG R E+A +L I A + S + +IHG GTG +++ + L+++PRV
Sbjct: 712 KTSARLDLRGHRYEQAMSELSNFIDHALLNNLSTVTIIHGKGTGALRKGTQQYLQSNPRV 771
Query: 817 AKYEQESPMNYGCTVAYI 834
+ SP N G A I
Sbjct: 772 KSFSYASP-NAGGDGATI 788
>gi|423335900|ref|ZP_17313651.1| DNA mismatch repair protein [Lactobacillus reuteri ATCC 53608]
gi|337729103|emb|CCC04226.1| DNA mismatch repair protein [Lactobacillus reuteri ATCC 53608]
Length = 791
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 200/678 (29%), Positives = 330/678 (48%), Gaps = 88/678 (12%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P++T R R + + A ++ G+ + S+SG T ++EP VE NN RL ++I
Sbjct: 187 PIVTMRNDRYVIPVIARYRNKF-GGVVHDQSASGQTLYIEPAAVVETNN---RLRQAQIE 242
Query: 229 EETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E +L L+ IA +I + +D A+A +A P+LS ++HVS
Sbjct: 243 ERQEMQRVLIELSQMIAPYRHDIGQNEAILGHLDFINAKARWAHDTKATLPLLSKENHVS 302
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
+ +HPL+ +P + V DI
Sbjct: 303 LRKA------RHPLI---------------DPRRV--------------------VTNDI 321
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
K+ + + ++ITGPNTGGKT ++KTLG+ LM ++GL++PA+ + FD + ADIGD
Sbjct: 322 KIGEDYQAIIITGPNTGGKTITLKTLGIIQLMGQSGLFIPAEEGSTIGIFDNVFADIGDE 381
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QSLEQNLSTFSGH+ + ILE ++ S+VL+DE+G+GTDP EG ALA +IL + +
Sbjct: 382 QSLEQNLSTFSGHMDGVKAILEQITSRSIVLLDELGAGTDPKEGAALAMAILDNIGSKGT 441
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ V+TTHY +L + NA+ EF ETL+PTY++L G G SN L IA+ +G +
Sbjct: 442 MVVITTHYPELKVYGYDRAKTINASMEFDQETLKPTYKLLLGIPGRSNGLEIAQRLGINP 501
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
++I A+ V + + L+E+R+K ++ A L A+ + R+++++
Sbjct: 502 QVIDEARTFV-----SDDSQDLNNMIGDLVEQRKKAREESERLAKLVAKNEKVQRDLDEK 556
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--S 643
+ + L + + +++ AK + D ++ + LR + + +KE+E
Sbjct: 557 LTRFNEQRDKLYEQARSKANHQVSMAKKKADRII----HHLRQLEVQQGGN-VKENELID 611
Query: 644 AIAAIVEAHRPDDDF---SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
A + HR + SV + G+ V VKS G + ++ G+ V
Sbjct: 612 AQGQLNALHRDNPRLQHNSVLQRAKQKHDLHKGDAVLVKSYG-QYGELLSKRGNHKWE-V 669
Query: 701 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 760
Q G +++ + +NN+ + A PR + + ++ + QT
Sbjct: 670 QIGILKMEIDENNLEKV-------AKKDLPREKDARRRPRAAVRTT-----------QTR 711
Query: 761 KNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
K S LDLRG R E+A +L I A + S + +IHG GTG +++ + L+++PRV
Sbjct: 712 KTSARLDLRGHRYEQAMSELSNFIDHALLNNLSTVTIIHGKGTGALRKGTQQYLQSNPRV 771
Query: 817 AKYEQESPMNYGCTVAYI 834
+ SP N G A I
Sbjct: 772 KSFSYASP-NAGGDGATI 788
>gi|301300876|ref|ZP_07207048.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851475|gb|EFK79187.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus salivarius ACS-116-V-Col5a]
Length = 786
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 228/798 (28%), Positives = 364/798 (45%), Gaps = 98/798 (12%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI G LNS E+ A+ R LRA N V + + A D+ + L + +
Sbjct: 79 DIGGTLNS---------KELAAIGRVLRATNEVNRFFKDLA----DNKIKLEVLFDDVAK 125
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG 165
L E+ +K+ I+ + D AS L+ IR + E + L +
Sbjct: 126 LESLPEISKKLLVSIENDGHVT-DDASTLLKSIRQQISVTEETIRERLNAYTRGT-NSKY 183
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
+ ++T R R + +K ++ GI + SSSG T F+EP VE NN RL
Sbjct: 184 LSNAVVTIRNERYVLPVKQEYRSKF-GGIVHDQSSSGQTLFVEPAVIVELNN---RLRQQ 239
Query: 226 EIAEE---TAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
++AE IL L+ E+A E+ + +D A+A +A + PILS ++
Sbjct: 240 QVAEREEINRILEELSKELAPYTHELNNNAKILGMLDFINAKAKYAHSIKATEPILSKEN 299
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
V + + HPLL +K V+N
Sbjct: 300 DVY------LRQVWHPLL----------------DMKKAVKN------------------ 319
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
DI + + + +VITGPNTGGKT ++KTLGL LM ++GLY+PA R+ FD I ADI
Sbjct: 320 -DIMIGKDYQAIVITGPNTGGKTITLKTLGLVQLMGQSGLYIPAFEESRIGIFDDIFADI 378
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QS+EQ+LSTFS H++ IV+IL+ + +SLVL DE+G+GTDP EG ALA SIL +
Sbjct: 379 GDEQSIEQSLSTFSSHMTNIVEILKGIDEKSLVLFDELGAGTDPQEGAALAISILDAVGA 438
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
+ V TTHY +L + NA+ EF TL+PTYR+L G G SNA +I++ +G
Sbjct: 439 KGSYVVATTHYPELKAYGFERPNTINASMEFDANTLQPTYRLLIGIPGRSNAFDISQRLG 498
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
D+ I+ A++L + +E+ L+ +R E + E +L+ ++
Sbjct: 499 LDKMIVMAARQLT-----SQDSQDLNEMISDLVAKRHDAEEKEIMYRKYLREAEELHHDL 553
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKES 641
E +R+ ++ + ++ Q + K + D ++ + ++ AS E SLI
Sbjct: 554 ETNFHQFERQKENMLEQAKERANQIVEETKKKSDELISELRKMKMSAASNIEEGSLIDAQ 613
Query: 642 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
A E + + P + V V S G + V+ + VQ
Sbjct: 614 GRVNALHQETNLKKNKVLRKAKQQQELHPN--DDVMVNSYGQR--GVLLRKAGNHAWEVQ 669
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G +++++ ++++ I K + +++ + S+ + P
Sbjct: 670 LGILKMKIDESDLEKIK--------------VKDTQPKRAEAVLKSSSSSHVSP------ 709
Query: 762 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+LDLRG R E A ++D I A + + +IHG GTG ++ ++ L+ + V +
Sbjct: 710 -TLDLRGERYENAMVKVDRYIDAAVLAGYNSVTIIHGKGTGALRTGIINYLKQNKAVKNF 768
Query: 820 EQESPMN--YGCTVAYIK 835
E SP N G TV Y K
Sbjct: 769 EFASPNNGGNGATVVYFK 786
>gi|145351670|ref|XP_001420191.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580424|gb|ABO98484.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 502
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 157/429 (36%), Positives = 234/429 (54%), Gaps = 45/429 (10%)
Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL 170
E+ E I C+ +LD ASE L IR E++R E L ++L + ++ + ++
Sbjct: 6 EVVEAIERCVSVPGGEVLDAASETLRAIRVEQRRIREELRTMLNATSKEMARKNFAERAQ 65
Query: 171 ITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEE 230
I R R C+ +K LP G+ L+VS +G T F EP+ AV NN LS SE AE
Sbjct: 66 IVTRLGRQCIPMKLGSAGELP-GVVLDVSGTGNTVFKEPQIAVPLNNALATLSASEDAEI 124
Query: 231 TAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL LT+ I ++ ++ + L E+D+A ARA A+W DG P + V +
Sbjct: 125 ERILVELTS-IVQTHADVLLDANEALTELDVANARARHAEWFDGAEPTI-----VDANQG 178
Query: 290 INIEGIKHPLL----LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
+ + ++HPL G+ +R D VPID
Sbjct: 179 MCVRELQHPLFRHWRRGTDVR-------------------------------DVVVPIDF 207
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
V+ + V ITGPNTGGKTAS+K +G+A LM++AGLYLP ++ +P+F ++AD+GD
Sbjct: 208 NVDSSIKCVTITGPNTGGKTASLKAIGVACLMARAGLYLPCESGCEIPFFRHVIADLGDS 267
Query: 406 QSLEQN--LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDR 463
Q+LE + LSTF H+ + IL+ + ++LVL+DE GSGTDP+EG +LA ++L L
Sbjct: 268 QTLELDGGLSTFGAHLKGLQRILDAATDDTLVLLDEPGSGTDPAEGASLAVAVLNKLSRT 327
Query: 464 VGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGF 523
L + T+HY ++ + AA EF L++L+PTYR+LWG TG SNAL+IA +G
Sbjct: 328 SRLTIATSHYEEVKEATLASDTAQVAAVEFDLQSLQPTYRLLWGETGKSNALHIAAGLGL 387
Query: 524 DRKIIQRAQ 532
+ I+ A+
Sbjct: 388 EPWILAEAR 396
>gi|423138020|ref|ZP_17125663.1| MutS2 protein [Fusobacterium nucleatum subsp. animalis F0419]
gi|371958582|gb|EHO76291.1| MutS2 protein [Fusobacterium nucleatum subsp. animalis F0419]
Length = 778
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 225/819 (27%), Positives = 381/819 (46%), Gaps = 162/819 (19%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V KL D L +Y L E + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSKL--------DELGKYKQLRETIGNIPNLRLIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINAEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A P +S++ +S
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENRCEIPTVSNREILS------ 300
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+E +HP + D VP+ ++ +
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVVPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R L+ + +L E
Sbjct: 506 KAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564
Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPRLRKQQEDRQ 740
A ++++ ++ +VQ G +++ V N I+ + K K N P
Sbjct: 649 FANILKINTSKESAMVQAGILKLEVPFNEIKVVEEKKEKVYNMNTHKKTP---------- 698
Query: 741 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMG 798
++ +DLRG V+EA ++L+ L A + +F+IHG G
Sbjct: 699 -------------------VRSEIDLRGKMVDEAVYELETYLDRATLNGYTEVFIIHGKG 739
Query: 799 TGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
TG ++E +L+ L+ V +Y GCTV +K
Sbjct: 740 TGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|227544199|ref|ZP_03974248.1| MutS family DNA mismatch repair protein [Lactobacillus reuteri
CF48-3A]
gi|338204121|ref|YP_004650266.1| DNA mismatch repair protein MutS [Lactobacillus reuteri SD2112]
gi|227185835|gb|EEI65906.1| MutS family DNA mismatch repair protein [Lactobacillus reuteri
CF48-3A]
gi|336449361|gb|AEI57976.1| DNA mismatch repair protein MutS [Lactobacillus reuteri SD2112]
Length = 791
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 199/679 (29%), Positives = 327/679 (48%), Gaps = 90/679 (13%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P++T R R + + A ++ G+ + S+SG T ++EP VE NN RL ++I
Sbjct: 187 PIVTMRNDRYVIPVIARYRNKF-GGVVHDQSASGQTLYIEPAAVVETNN---RLRQAQIE 242
Query: 229 EETA---ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E +L L+ IA +I + +D A+A +A P+L+ ++HVS
Sbjct: 243 ERQEMQRVLIELSQMIAPYRHDIGQNEAILGHLDFINAKARWAHDTKATLPLLNKENHVS 302
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
+ +HPL+ +P + V DI
Sbjct: 303 LRKA------RHPLI---------------DPQRV--------------------VTNDI 321
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
K+ + + ++ITGPNTGGKT ++KTLG+ LM ++GL++PA+ + FD + ADIGD
Sbjct: 322 KIGEDYQAIIITGPNTGGKTITLKTLGIIQLMGQSGLFIPAEEGSTIGIFDNVFADIGDE 381
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QSLEQNLSTFSGH+ + ILE ++ SLVL+DE+G+GTDP EG ALA +IL + +
Sbjct: 382 QSLEQNLSTFSGHMDGVKAILEQITSRSLVLLDELGAGTDPKEGAALAMAILDNIGSKGT 441
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
+ V+TTHY +L + NA+ EF ETL+PTY++L G G SN L IA+ +G
Sbjct: 442 MVVITTHYPELKVYGYDRAKTINASMEFDQETLKPTYKLLLGIPGRSNGLEIAQRLGISP 501
Query: 526 KIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDE 585
++I A+ V + + L+E+R+K ++ A L A+ + R+++ +
Sbjct: 502 QVIDEARTFV-----SDNSQDLNNMIGDLVEQRKKAREESEKLAKLVAKNEKVQRDLDKK 556
Query: 586 AKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESA 644
+ + L + + +++ AK + D ++ +++ + N LI +++
Sbjct: 557 LTRFNEQRDKLYEQARSKANHQVSMAKKKADRIIHHLRQLEVQQGGNVKENELI-DAQGQ 615
Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
+ A+ + SV + G+ V VKS G + ++ G+ VQ G
Sbjct: 616 LNALHHDNPRLQHNSVLQRAKQKHDLHKGDAVLVKSYG-QYGELLSKRGNHKWE-VQIGI 673
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR-----VQT 759
+++ + +NN+ + A PR ++A PR QT
Sbjct: 674 LKMEIDENNLEKV-------AKKDLPR----------------EKDAKRRPRAAVRTTQT 710
Query: 760 SKNS--LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
K S LDLRG R E+A +L I A + S + +IHG GTG +++ + L+++PR
Sbjct: 711 RKTSARLDLRGHRYEQAMSELSNFIDHALLNNLSTVTIIHGKGTGALRKGTQQYLQSNPR 770
Query: 816 VAKYEQESPMNYGCTVAYI 834
V + SP N G A I
Sbjct: 771 VKSFSYASP-NAGGDGATI 788
>gi|421144927|ref|ZP_15604829.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395488694|gb|EJG09547.1| DNA mismatch repair protein mutS [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 778
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 218/818 (26%), Positives = 380/818 (46%), Gaps = 160/818 (19%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L E + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSRL--------DELGKYKQLRETIGNIPNLRVIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR ++ L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKR----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A P ++++ +S + +
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENKCEIPTVNNKEILSLEKA-- 304
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+HP + D VP+ ++ +
Sbjct: 305 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R +A+ + +
Sbjct: 506 RAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEARIDRERAKQETLIIEKQKNEI 565
Query: 575 IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFENQ 625
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 566 IKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM--------------- 610
Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 611 --------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQF 649
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPRLRKQQEDRQS 741
A ++++ ++ VQ G +++ V + I+ + K K N P
Sbjct: 650 ANILKINTSKESASVQAGILKLEVPFDEIKIVEEKKEKVYNMNTHKKTP----------- 698
Query: 742 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 799
++ +DLRG V+EA ++L+I L A + +++IHG GT
Sbjct: 699 ------------------VRSEIDLRGKMVDEAVYELEIYLDRATLNGYTEVYIIHGKGT 740
Query: 800 GVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
G ++E +L+ L+ V +Y GCTV +K
Sbjct: 741 GALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|189425838|ref|YP_001953015.1| MutS2 family protein [Geobacter lovleyi SZ]
gi|189422097|gb|ACD96495.1| MutS2 family protein [Geobacter lovleyi SZ]
Length = 785
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 223/817 (27%), Positives = 380/817 (46%), Gaps = 117/817 (14%)
Query: 39 LDLSTIEDIAGILNSA-VSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
L +S DI +L + SG +LSP E+ L ++ + ++L ++
Sbjct: 64 LRISRFSDIRPLLEAVRPSGAILSPFELLEFIPVLGSLAELARQLAPREDI--------- 114
Query: 98 PLLELLKNCNF-LTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSL 152
P L+LL ++ E + +D + ILD AS++L IR ++ R + L+
Sbjct: 115 PALKLLSPFPVAFNDILEPLAATLDDEG-NILDSASQELSQIRKAKRTLAARVRKKLEEF 173
Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
+++ IF + IT R R + ++ K ++P G+ +VSSSG T FMEP
Sbjct: 174 VRRHETAIF----LQDDFITIRSGRWVIPVRMDSKGMVP-GVVHDVSSSGETAFMEPLEI 228
Query: 213 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
+ F N LS E AEE IL L+A I + +I ++E+D + A FA+
Sbjct: 229 IPFVNELENLSAEEKAEEIRILRRLSAWIREDAEQIGACFKSLVELDRLDSVAAFAEKFS 288
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
P L+ + S+ + +HPLLL + ++ P+
Sbjct: 289 MSVPELNQ------NGSLRLLSARHPLLL-----VMREQQQDTTPI-------------- 323
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
VP+D+++ ETRV+ I+GPN GGKT ++KT+GL + M+ +G+ +PA +
Sbjct: 324 --------VPLDLELGNETRVLTISGPNAGGKTIALKTVGLITAMALSGMPVPASPSSSI 375
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
P D +L DIGD QS+EQ+LSTFS H++ I IL SLVL+DE+G+GT+P +G A+
Sbjct: 376 PLLDALLVDIGDDQSIEQSLSTFSAHVAAIAGILGQTGSRSLVLLDELGTGTEPLQGAAI 435
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
++L L+ R L + TTH ++ + +NA EF T P YR++ G G S
Sbjct: 436 GCAVLHELQSRGALVLATTHLTEIVGFVQRSQGMQNAGMEFDSATWTPLYRLVMGEPGQS 495
Query: 513 NALNIAKSIGFDRKIIQRAQKL-----------VERLRPERQQHRKSELYQSLMEERRKL 561
+AL A+ G ++Q A+ L ++ LR +R + ++ +ER++L
Sbjct: 496 HALETARRYGLPESVLQFARNLLGDAGTAFAGIIDELRQKR--NALADELDRQQQERQRL 553
Query: 562 ESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQD 621
+ A A+++ L +E ++A+ Q + + A+ +++ +++
Sbjct: 554 DGLAMALKQQEADLVRLRQETIEKAR--------------QDARDTITAARREMNQLLEQ 599
Query: 622 FENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSL 681
F+ R + + +E E++ A + S+ Q G V V+SL
Sbjct: 600 FKQDRRKETEVKFRQKAEELEASFA------------PTGQQAPSADALQPGSIVQVRSL 647
Query: 682 GDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQS 741
G + ATV+ + V V+ G + + V + + I + A P PR
Sbjct: 648 GRE-ATVISIDQARHKVRVRAGSIEMEVPLHGL--IIGT---TTAAPKPR---------- 691
Query: 742 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGT 799
+ E + + + + N L+L G RVEEA +L+ I A + + ++HG+GT
Sbjct: 692 ----KNVPEINMKRQTEEAANDLNLIGKRVEEALIELEGFIDQAILAGQREIRIVHGIGT 747
Query: 800 GVVKERVLEILRNHPRVAKYEQESPMNY--GCTVAYI 834
G ++ V E L HP+VA + P G T+A +
Sbjct: 748 GTLQRAVREFLGRHPQVAAFRPGEPHEGRDGVTIAEL 784
>gi|340754472|ref|ZP_08691225.1| MutS2 protein [Fusobacterium sp. 2_1_31]
gi|229423979|gb|EEO39026.1| MutS2 protein [Fusobacterium sp. 2_1_31]
Length = 778
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 218/810 (26%), Positives = 380/810 (46%), Gaps = 144/810 (17%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L + + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRVFKARL--------DELGKYKQLRDTIGNIPNLRMIEDMI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
I+ + I D AS DL IR +K N+ +++ + A + +IT+R
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKKTLNMNIKRKFEELFDEPSLANAFQERIITERDG 192
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
RM +K K L+ GI + SSSG T F+EP V NN L E E IL L
Sbjct: 193 RMVTPVKFDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKIL-L 250
Query: 237 LTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
AE+ ++ R+ I + D+ L +D+ A++ +A +D C I + VS +++E
Sbjct: 251 RIAELLRNNRDDILAIGDKALYLDILNAKSIYA--VDNKCEIPT----VSNREVLSLEKA 304
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
+HP + D VP+ ++ + +++
Sbjct: 305 RHPFI-----------------------------------DKDKVVPLTFEIGKDYDILL 329
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+LS+F
Sbjct: 330 ITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSF 389
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
S H+ + +IL V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TTHY+
Sbjct: 390 SAHLKNVKEILAGVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKAKSFITTHYSQ 449
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA---- 531
+ + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 450 VKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKARAYI 509
Query: 532 -------QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE------IMDL 578
+K++E ++ + Q+ + + +EE +L+ + +L E I
Sbjct: 510 SEDNKKVEKMIENIKTKSQELDEMRERFARLEEEARLDRERAKQETLVIEKQKNEIIKAA 569
Query: 579 YREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFENQLRDA 629
Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 570 YEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM------------------- 610
Query: 630 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
+++ ++E ++ +V+ + +F V G++V VKS+ ++ A ++
Sbjct: 611 ----LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQFANIL 653
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
++ ++ VQ G +++ V P ++ +E ++ S+++
Sbjct: 654 KINTSKESASVQAGILKLEV------------------PFEEIKIVEEKKEKVYNVSTHK 695
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 807
+ ++ +DLRG V+E ++L+ L A + ++VIHG GTG ++E +L
Sbjct: 696 KTPV-------RSEIDLRGKMVDEGIYELETYLDRATLNGYTEVYVIHGKGTGALREGIL 748
Query: 808 EILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+ L+ V +Y GCTV +K
Sbjct: 749 KYLKTSKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|116514507|ref|YP_813413.1| MutS family ATPase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
gi|116093822|gb|ABJ58975.1| MutS family ATPase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC BAA-365]
Length = 787
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 229/729 (31%), Positives = 347/729 (47%), Gaps = 114/729 (15%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518
Query: 541 ERQQHRKSELYQSL---MEERRKLESQARTAASLHAEI---MDLYREIEDEAKD--LDR- 591
+ H EL + E ++KL++ A L ++ +D+Y + + D LDR
Sbjct: 519 DI-NHMIDELNKQTKLATENKQKLQTSLDRAKQLEKKLQDALDIYNQRVQKQLDFALDRA 577
Query: 592 -RAAHLKAKETQQVQQELNFAK---VQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
K K+ ++ EL A+ +Q+ T NQL DA E N L K+ E +A
Sbjct: 578 NEIVSKKRKKADKIIAELEEARKEGMQVKT------NQLMDAKG-EFNQLAKQ-EVNLAK 629
Query: 648 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
V + Q G++V V S G + TV + G+ D V G++++
Sbjct: 630 ----------NKVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHDYE-VSLGRIKL 677
Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 767
+V +I + +++ A A+ R +++SLDLR
Sbjct: 678 KVTDRDIDKLAAGQKQQA----------------------QRRATSASRSSRARSSLDLR 715
Query: 768 GMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 825
G R EEA LD S + +IHG+GTG +++ V + L+ + V Y +P
Sbjct: 716 GQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHVKTYSY-APA 774
Query: 826 NYGCTVAYI 834
N G T A I
Sbjct: 775 NEGGTGATI 783
>gi|295425851|ref|ZP_06818531.1| DNA mismatch repair protein MutS [Lactobacillus amylolyticus DSM
11664]
gi|295064454|gb|EFG55382.1| DNA mismatch repair protein MutS [Lactobacillus amylolyticus DSM
11664]
Length = 785
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 220/733 (30%), Positives = 352/733 (48%), Gaps = 117/733 (15%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
+LD AS L +R + + N E + K + + G K L +T R R + +
Sbjct: 146 VLDTASTALARLRHDMRSNEEEI-----KAKMEGYTKGNSSKYLSEGIVTIRDDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ +A
Sbjct: 201 KQEYRGKFG-GVVHDQSASGQTLFVEPEAVLNLNNRQQNLVAQERQEIHRILKSLS-NLA 258
Query: 243 KSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
++E + + + + E+D A+A A+ M P LS D S+N+ +HPL+
Sbjct: 259 RTEIDRLNAIASALTELDFLQAKAKLAKQMKASQPKLSK------DHSLNLLKARHPLI- 311
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
+P K VP DI++ + ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGDKFDTMLITGPNT 337
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT GL LM+++GL++PA+ + F + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSTVGVFKQVYADIGDEQSIEQSLSTFSSHIND 397
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV I++ V+ ++LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IVYIMKHVNADTLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGY 457
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
R NA+ EF L+TL PTY + G G SNA IA+ +G ++Q AQ L+
Sbjct: 458 NRERTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVQNAQGLM------ 511
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEI-MDLYREIEDEAKD-LDRRAAHLKAK 599
+ S+ + M ER +++A TAA + +D +++E++ ++ LD
Sbjct: 512 ----KDSDSDINKMIERLNEQTKAATAARNRLQTSLDRSQKLEEKLQEALDWY------- 560
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA--AIVEAHRPDDD 657
Q+VQ++L+FA+ + + VV R AD+I ++ S I I++A +
Sbjct: 561 -NQRVQKQLDFAQERANEVVAK-----RRKKADQIIKQLENSRQHIKENEIIDAKGQLNK 614
Query: 658 FSVSETNTSSFTP--QFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYGKMR 706
E N + Q ++ H ++GDK+ + G T+ VQ G ++
Sbjct: 615 LEQQEANNLAHNKVLQHEKRRHHVNVGDKVKVL--SYGQTGTITKKLSAHEYEVQIGIIK 672
Query: 707 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 766
+V +I + K P ++R SG+ +N + + LDL
Sbjct: 673 TKVSDRDIEKVTGEK----TTPKKQVRA-----TSGTLRRNN-----------AHSELDL 712
Query: 767 RGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQE 822
RG R +EA LD I + +IHG+GTG +++ V + LR NH + Y
Sbjct: 713 RGQRYDEAMTNLDRYIDSVLLAGLDYVTIIHGIGTGAIRKGVWQYLRSSNHVKSFNYAPA 772
Query: 823 SPMNYGCTVAYIK 835
+ G T+ ++K
Sbjct: 773 NEGGNGATIVHLK 785
>gi|163791552|ref|ZP_02185956.1| MutS2 family protein [Carnobacterium sp. AT7]
gi|159873188|gb|EDP67288.1| MutS2 family protein [Carnobacterium sp. AT7]
Length = 788
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 237/821 (28%), Positives = 382/821 (46%), Gaps = 148/821 (18%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI LN L ++I + RT +N ++ L E+ G + R L E
Sbjct: 79 DIGASLNG------LEIAQIGKILRTTSEINRFFENLKES----GIEMNRLYELTEKFIT 128
Query: 106 CNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIF 161
L +L I +D ++ D AS L+ IR KR E LD +++ +AQ
Sbjct: 129 TPALNQL---IRETVDEDGRVMND-ASPALKGIRTGIKRGETNVREKLDGIVRGKSAQY- 183
Query: 162 QAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVR 221
+ +IT R R + +K ++ G+ + SS+G T F+EP+ VE NN +
Sbjct: 184 ----LSDTIITIRNDRYVIPVKQEYRSHF-GGVVHDQSSTGQTLFVEPQSVVELNNRLRQ 238
Query: 222 LSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 281
L E E IL+ ++ EIA ++I M + ++D A+A +A+ +D P++ +
Sbjct: 239 LQIEERREIDRILAEISNEIAPYSKDILNNMYLLGKLDFIGAKASYAKNIDANRPMIHDE 298
Query: 282 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
+ V S+ +HPLL S+ V
Sbjct: 299 NEVKLLSA------RHPLLDPESV-----------------------------------V 317
Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
DI + E + V+ITGPNTGGKT +KTLGL LM ++GL LP ++ F I AD
Sbjct: 318 ANDILIGGENQAVIITGPNTGGKTIILKTLGLLQLMGQSGLQLPVAPDSQMGLFTEIFAD 377
Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
IGD QS+EQ+LSTFS H++ IV IL+ + +SL++ DE+G+GTDP EG ALA +IL
Sbjct: 378 IGDEQSIEQSLSTFSSHMTNIVSILDRIDNKSLIIFDELGAGTDPQEGAALAIAIL---- 433
Query: 462 DRVG----LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
DRVG +VT+HY +L + NA+ EF ++TL PTYR+L G G SNA I
Sbjct: 434 DRVGAVGSYVMVTSHYPELKAYGYNRPQTINASMEFDIDTLSPTYRLLIGVPGRSNAFEI 493
Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQ---------QHRKSELYQSLMEERRKLESQARTA 568
+K +G ++I A++L++ E Q ++R+ +E R ++ +
Sbjct: 494 SKRLGLSEEVIDSARQLID---GESQNLNEMISDLENRRKMAETEYLEVRHYVDEAEQLH 550
Query: 569 ASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL--NFAKVQI--------DTV 618
A L + Y E E+ K +A L +ET++ ++ + K QI +
Sbjct: 551 ADLQTAVQQFYAEREELLKKAREKANSL-VEETEETANQIIKDLRKKQILGQYEGVKEHE 609
Query: 619 VQDFENQ---LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQ 675
+ D + Q LR A E N ++K++++ + +P DD
Sbjct: 610 LIDAKTQLSGLRQEEALEKNKVLKKAKAK-----QVMKPGDD------------------ 646
Query: 676 VHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQ 735
V V+S G K ++ D + +VQ G +++++K++++ AP ++
Sbjct: 647 VIVQSFGQK--GILMEKADKNHWVVQMGMLKMKLKESDL-----------TLTAP---EK 690
Query: 736 QEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFV 793
+ R+ ++ S + P+ LDLRG R E A +LD L A + + +
Sbjct: 691 EPSRKMIASVRSESNSHVSPQ-------LDLRGERYENALAELDRYLDAALLANYPQVTI 743
Query: 794 IHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
+HG GTG +++ V E L+ H + + Q +P N G A I
Sbjct: 744 VHGKGTGAIRQGVTEALKKHRSIKSF-QYAPPNQGGNGATI 783
>gi|430843631|ref|ZP_19461530.1| MutS2 protein [Enterococcus faecium E1050]
gi|430497490|gb|ELA73527.1| MutS2 protein [Enterococcus faecium E1050]
Length = 786
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 215/729 (29%), Positives = 348/729 (47%), Gaps = 113/729 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL--- 596
++ Q L E LE++ + A + + E+ E ++ DL ++
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 597 -------KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 649
K+ +V E +I ++ + Q+ + E + LI A +
Sbjct: 564 REKEMEKAKKKANEVVSEAEEKAEKIIADIRKMQQQIGQGNVKE-HQLI----DAKTQLA 618
Query: 650 EAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
H+ + V + T + G++V V + G + T++ G+ V+ G +++
Sbjct: 619 NLHQEEILKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIGILKM 675
Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 767
V ++ + P+ AP Q+E Q +E +S+ P N LDLR
Sbjct: 676 NVSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLR 714
Query: 768 GMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 825
G R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P
Sbjct: 715 GKRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APA 773
Query: 826 NYGCTVAYI 834
N G A I
Sbjct: 774 NQGGNGATI 782
>gi|354806618|ref|ZP_09040099.1| mutS2 family protein [Lactobacillus curvatus CRL 705]
gi|354514802|gb|EHE86768.1| mutS2 family protein [Lactobacillus curvatus CRL 705]
Length = 787
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 241/854 (28%), Positives = 406/854 (47%), Gaps = 111/854 (12%)
Query: 2 GHAVV-----QKAQIPFGKSLEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAV 55
GHA+ Q Q+ E Q+ L+QT + + + + + L +++I L
Sbjct: 20 GHAITAFGQEQITQLTPANDAELIQERLDQTKDGVDIERLKGGIPLPQLDNIRPHLKRIE 79
Query: 56 SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEK 115
G L+ +E+ V R LRA + V + + L+ D L L +L+ L +L EK
Sbjct: 80 IGATLNGTELAQVGRVLRATSAVVRFFDD---LEKDEL-TLKALPDLVAQLVTLPQLTEK 135
Query: 116 IGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF---QAGGIDKPLIT 172
I + +LD AS L +R +++ L+ ++ A +A + ++T
Sbjct: 136 IRSSV-ADDGAVLDTASTKLRGLRT----SLKQLEGQIRSRMASYTHGAKAKYLSDSIVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + +K ++ G+ + S+SG T FMEP+ +E NN +L E E
Sbjct: 191 IRNDRYVIPVKQEYRGQF-GGVVHDQSASGQTLFMEPQALMELNNRLRQLQIEEQQEIER 249
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL+ L+ I I + + ++D A+A A+ + P+++ ++HV +
Sbjct: 250 ILAELSEAIMPERHNILANAELLGQLDFVNAKAQLAKALKATEPLINLENHVELKQA--- 306
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
+HPL+ +P K V DI + + +
Sbjct: 307 ---RHPLI---------------DPAKV--------------------VANDIAIGADYQ 328
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
+V+TGPNTGGKT ++KTLGL +M+++GL++ A+ ++ F I ADIGD QS+EQNL
Sbjct: 329 AIVVTGPNTGGKTITLKTLGLVQVMAQSGLFITAREESQVGVFSDIFADIGDEQSIEQNL 388
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL----AV 468
STFS H+ I+ IL+ + SLVL+DE+G+GTDP EG ALA +IL D++G+ V
Sbjct: 389 STFSAHMENIIQILQHIDDRSLVLLDELGAGTDPQEGAALAIAIL----DQIGIVGADVV 444
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
+THY +L + NA+ EF + TL+PTYR+L G G SNA +I+ +G I+
Sbjct: 445 ASTHYPELKIYGYNRPQTINASMEFDVATLQPTYRLLIGVPGRSNAFDISTRLGLPSSIV 504
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
Q+A++L + E Q + + L +R+ E++ + AE DL++++ +
Sbjct: 505 QQAKQL---MNDESQD--LNNMITDLENQRKAAETEYQALRHELAEATDLHQQLSTAYQQ 559
Query: 589 L--DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE--SA 644
DR KAKE + + A+V+ D V+ +LRD ++ + IKE++ A
Sbjct: 560 FFEDRETEMTKAKE--KANAIVEKAEVKADKVI----TKLRDMQMNQ-GAQIKENQLIDA 612
Query: 645 IAAIVEAHRPD--DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
+ + + H+ V + T + G+ V V S G + V ++ D VQ
Sbjct: 613 KSELGQLHQETTLKKNKVLQRAKRRQTLKEGDDVLVTSYGQRGTLVRQI--DAKNWEVQM 670
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G +++++ ++ K+K + P+ R + S A Y K
Sbjct: 671 GIIKMKIANEDL-----EKQKVVEDNRPQ-------RHVTTVNSGG--ARY------VKA 710
Query: 763 SLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE 820
LDLRG R EEA ++D + A + + ++HG GTG +++ V + L+ + +V KYE
Sbjct: 711 QLDLRGKRYEEAMAEVDQYVDAALLANYQQVTIVHGKGTGAIRQGVQDYLKGNRQVKKYE 770
Query: 821 QESPMNYGCTVAYI 834
+P N G A I
Sbjct: 771 Y-APANAGGNGATI 783
>gi|294784135|ref|ZP_06749436.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_27]
gi|294488205|gb|EFG35550.1| DNA mismatch repair protein mutS [Fusobacterium sp. 3_1_27]
Length = 778
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 218/818 (26%), Positives = 380/818 (46%), Gaps = 160/818 (19%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L E + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSRL--------DELGKYKQLRETIGNIPNLRVIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A P ++++ +S + +
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENKCEIPTVNNKEILSLEKA-- 304
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+HP + D VP+ ++ +
Sbjct: 305 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R +A+ + +
Sbjct: 506 RAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEARIDRERAKQETLIIEKQKNEI 565
Query: 575 IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFENQ 625
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 566 IKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM--------------- 610
Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 611 --------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQF 649
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPRLRKQQEDRQS 741
A ++++ ++ VQ G +++ V + I+ + K K N +P
Sbjct: 650 ANILKINTSKESTSVQAGILKLEVPFDEIKIVEEKKEKVYNMNTHKKSP----------- 698
Query: 742 GSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGT 799
++ +DLRG V+EA ++L+ L A + +++IHG GT
Sbjct: 699 ------------------VRSEIDLRGKMVDEAIYELETYLDRATLNGYTEVYIIHGKGT 740
Query: 800 GVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
G ++E +L+ L+ V +Y GCTV +K
Sbjct: 741 GALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|226323501|ref|ZP_03799019.1| hypothetical protein COPCOM_01276 [Coprococcus comes ATCC 27758]
gi|225208185|gb|EEG90539.1| MutS2 family protein [Coprococcus comes ATCC 27758]
Length = 791
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 199/657 (30%), Positives = 313/657 (47%), Gaps = 77/657 (11%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R C+ +KA ++ + +G+ + S++G+T F+EP V+ NN L E E
Sbjct: 187 IITMRGDRYCLPVKAEYRSQV-NGLIHDQSATGSTLFIEPMAVVKLNNDLKELYAQEQEE 245
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
IL+ L+ + A+ EI+ ++E+D FA+ A M+ P+ +++
Sbjct: 246 IQVILARLSVDAAEYIEEIRLNYKALVELDFIFAKGALALDMNASRPVFNTEGR------ 299
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
I I +HPLL + VPI + +
Sbjct: 300 IRIREGRHPLLDRKKV-----------------------------------VPISLTLGD 324
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
++VITGPNTGGKT S+KT+GL +LM +AGL++PA + L F+ + ADIGD QS+E
Sbjct: 325 TFDLLVITGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELAVFNQVYADIGDEQSIE 384
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H++ +V L V SLVL DE+G+GTDP+EG ALA +IL +L +R +
Sbjct: 385 QSLSTFSSHMTNVVSFLNHVDENSLVLFDELGAGTDPTEGAALAIAILSHLHNRGIRTMA 444
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY++L ENA EF +ETL PTY +L G G SNA I++ +G IIQ
Sbjct: 445 TTHYSELKVFALSTPGVENACCEFDVETLSPTYHLLIGIPGKSNAFAISEKLGLPDYIIQ 504
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
A+ L E + +L L + R+ +E + AS E+ L E++++ + L
Sbjct: 505 DAKT---HLTEEDESFE--DLLTDLEQSRKTIEKEREEVASYRREMERLKSELKNQQEKL 559
Query: 590 ----DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINSLIKESESA 644
DR A+ T VQ+ +FA D +++F + + SA E+ +
Sbjct: 560 DTQRDRIIREANARATDIVQEAKDFA----DETMKNFRKFGKASISASEMEKERERIRKQ 615
Query: 645 IAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
++ +R + S F G+ V V S+ + TV +P + VQ G
Sbjct: 616 LSKTENKNRLEKKKPSKAYKASDF--HLGDSVKVLSM-NLTGTVNSLPDAKGNLFVQMGI 672
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
+R +V +++ PI P KQ SG + G + S +
Sbjct: 673 LRSQVNISDLEPI--------EEPLTVTAKQMRRTSSG-------KMKMGKSMHVSPE-I 716
Query: 765 DLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+L G V+EA +LD L A S + ++HG GTG ++ + + LR + +
Sbjct: 717 NLLGKTVDEAVAELDKYLDDAYIAHLSPVRIVHGKGTGALRNGIHQYLRRQKHIKSF 773
>gi|312870454|ref|ZP_07730574.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus oris PB013-T2-3]
gi|311094011|gb|EFQ52335.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus oris PB013-T2-3]
Length = 790
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 225/787 (28%), Positives = 366/787 (46%), Gaps = 107/787 (13%)
Query: 80 KKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLII---LDR----A 131
K+L A L+G L + + +L+ L NF ++ EK KL ++ +DR
Sbjct: 76 KRLKIGANLNGTELAQVTKVLQASLSVQNFFEQMREK-----KIKLRVLEQTVDRLVTIP 130
Query: 132 SEDLELIRA---------ERKRNMENLDSLLKKVAAQIFQ----------AGGIDKPLIT 172
S L+R+ E + + L+ K +I Q A + +P++T
Sbjct: 131 SVTTRLVRSVDPDGRINDEASAKLHGIRQLISKTENEIRQQMAQYTQGKSAKYLSEPIVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + + A ++ G+ + S+SG T ++EP +E NN + E E
Sbjct: 191 VRNDRFVIPVLARYRNKF-GGVVHDQSASGQTLYIEPGAVMEDNNHLRQAQIEEKQEVLR 249
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
+L+ L+A I+ +I + +D A+A +A + P+LS+ D+ +N+
Sbjct: 250 VLAELSALISPYRHDILNNEQILGHLDFINAKAVYAHELKASLPLLSA------DNQVNL 303
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
HPL+ D V DIK+ + +
Sbjct: 304 RKAWHPLI-----------------------------------ARDQAVANDIKLGGDYQ 328
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
V+ITGPNTGGKT ++KTLG+ LM +AGL++PA+ + FD + ADIGD QSLEQNL
Sbjct: 329 AVIITGPNTGGKTITLKTLGIIQLMGQAGLFIPAQEGSTIGVFDNVFADIGDEQSLEQNL 388
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
STFSGH+ + IL+ ++ SLVL+DE+G+GTDP EG ALA +IL + R L ++TTH
Sbjct: 389 STFSGHMDNVKTILDQLTANSLVLLDELGAGTDPKEGAALAMAILDEIGQRGSLVMITTH 448
Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ 532
Y +L + NA+ EF TL+PTYR+L G G SN L IAK +G II AQ
Sbjct: 449 YPELKVYGYDRAKTINASMEFDQATLQPTYRLLLGIPGRSNGLEIAKRLGIGSAIISEAQ 508
Query: 533 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 592
LV + + L+E+R++ ++ A L A+ E+ + + +
Sbjct: 509 SLV-----SDDSQDLNAMIGDLVEQRKQAREESERLAKLVAQNQADQEELNQKLDRFNEQ 563
Query: 593 AAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAIVEA 651
L + Q ++ AK + D ++ +++ + + N L+ +++ A+ A+ +
Sbjct: 564 RDQLLERARSQANHQVAQAKRKADRIIHHLRQLEIQQGAGVKENQLM-DAQGALNALHQD 622
Query: 652 HRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
+ SV + G+ V VKS G ++ G+ VQ G +++ + +
Sbjct: 623 NPRLQHNSVLKRAKEKHDLHKGDAVLVKSYGQH-GELLSRRGNHKWE-VQIGILKMEIDE 680
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS--LDLRGM 769
++ + SKR L K+++ R A + QT K S LDLRG
Sbjct: 681 RDLEKV--SKRD--------LPKEKQQRTGHRAVKT---------TQTRKTSARLDLRGH 721
Query: 770 RVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY 827
R EEA +L I A + + +IHG GTG +++ + L+++PRV + +P N
Sbjct: 722 RYEEAMGELSNFIDHALLNNLGTVTIIHGKGTGALRKGTQQYLQSNPRVKSFSYAAP-NA 780
Query: 828 GCTVAYI 834
G A I
Sbjct: 781 GGDGATI 787
>gi|297588543|ref|ZP_06947186.1| MutS2 protein [Finegoldia magna ATCC 53516]
gi|297573916|gb|EFH92637.1| MutS2 protein [Finegoldia magna ATCC 53516]
Length = 783
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 233/842 (27%), Positives = 403/842 (47%), Gaps = 123/842 (14%)
Query: 18 EESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+E ++ L++T A++M+ S P I A I++ + G ++ P + + + L +V
Sbjct: 41 DEIRQSLDETYEAMSMIYKFSNPPIYEIINVKASIMHVSKGGYIV-PEVLLKIGQILSSV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+++ + E+ E + + Y ++ ++ + +L I I + I D AS +L
Sbjct: 100 HDIKRYAGESDE----NHENYPMIMAMMDSLVEEPDLVATINNAIISEDEI-SDNASRNL 154
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR +++ EN+ + + + QA + + ++T R R + +K SHK GI
Sbjct: 155 ARIRQTKRQKTENIRDKINSILSSNDQA--LQENIVTMRDDRYVIPVKVSHKSSFK-GIV 211
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ SSSG T ++EP VE NN L E E IL ++ + ++ I D +
Sbjct: 212 HDHSSSGQTVYIEPMEVVELNNELRMLEAEEREEIIRILKEISDRVYDAKDSIFVDQDVL 271
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+D FA+A +A +D P L++ + +F ++ +HPLL +
Sbjct: 272 SRLDFIFAKAKYAIEIDATNPKLNTNGYFNFKNA------RHPLLDKKKV---------- 315
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VPI I + + +VITGPNTGGKT ++KT+GL +
Sbjct: 316 -------------------------VPISIYLGDDYNTLVITGPNTGGKTVTLKTVGLIT 350
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
LM+++G+ +P + + FD I DIGD QS+EQ+LSTFS H+ IV I+ ++ SLV
Sbjct: 351 LMAQSGILIPVDENSEVAIFDNIFTDIGDEQSIEQSLSTFSAHMKNIVHIVNNITFNSLV 410
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+G+GTDP+EG ALA +IL+ D+ + TTHY+ L + +N + EF +
Sbjct: 411 LFDELGAGTDPTEGAALAIAILRIFLDKSIRTIATTHYSQLKIFALTEKYVKNGSVEFDV 470
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
TL PTY++ G G SNA I++ +G D II A++++ Q+ + E S +
Sbjct: 471 NTLSPTYKLRIGIPGKSNAFEISRRLGLDDDIINNAKEILS------QEDKDFEDVLSDI 524
Query: 556 E-ERRKLESQAR---TAASLHAEIMDLY-REIE----------DEAKDLDRRAAHLKAK- 599
E E+++++ R ++ D Y +E+E +EAK+ + +++AK
Sbjct: 525 ESEKKQIDEDKRRQLELKEDLLKLRDRYEKELEKTKLEKERIINEAKE-NANEIYMQAKE 583
Query: 600 ETQQVQQELNFAKVQID--TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
E++++ +L F + + D TV D E++ N IK+S S
Sbjct: 584 ESRELINKLKFLEKESDARTVANDVESKF--------NKRIKKSPSKKL----------- 624
Query: 658 FSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
++ET+ Q G++V + + D+ T+V P +LVQ G +++ N++ I
Sbjct: 625 --LNETSKKQ-NLQLGDEVEILGI-DQQGTIVSEPDKKGDLLVQVGILKINANVKNLKKI 680
Query: 718 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 777
K+QE QS + S + + K+ +DLRG +EEA ++
Sbjct: 681 ----------------KEQEVIQSSKSIKSIIKNKANSDI---KSEIDLRGKNIEEAIYE 721
Query: 778 LD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE--SPMNYGCTVAY 833
LD I + +IHG GTG++++ + E LR+ R+ K E + G T Y
Sbjct: 722 LDKYIDDCVIVGLKKVNIIHGKGTGMLRKGIREYLRSDKRIKKIEDAGYNEGGLGATFIY 781
Query: 834 IK 835
+K
Sbjct: 782 LK 783
>gi|430825904|ref|ZP_19444102.1| MutS2 protein [Enterococcus faecium E0164]
gi|430445612|gb|ELA55342.1| MutS2 protein [Enterococcus faecium E0164]
Length = 786
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 215/733 (29%), Positives = 353/733 (48%), Gaps = 121/733 (16%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA-------AIVEAH 652
+++++ A + VV + E + A++I I++ + I +++A
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEK-----AEKIIDDIRKMQQQIGQGNVKEHQLIDAK 614
Query: 653 RPDDDFSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
+ ET T + G++V V + G + T++ G+ V+ G
Sbjct: 615 TQLANLHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQR-GTLLRKNGNQ--WQVEIG 671
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
+++ V ++ + P+ AP Q+E Q +E +S+ P N
Sbjct: 672 ILKMNVSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQ 710
Query: 764 LDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 821
LDLRG R EEA ++D L A + ++HG GTG +++ + + L+NH V +E
Sbjct: 711 LDLRGKRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF 770
Query: 822 ESPMNYGCTVAYI 834
+P N G A I
Sbjct: 771 -APANQGGNGATI 782
>gi|395243119|ref|ZP_10420106.1| MutS2 protein [Lactobacillus hominis CRBIP 24.179]
gi|394484349|emb|CCI81114.1| MutS2 protein [Lactobacillus hominis CRBIP 24.179]
Length = 787
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 234/843 (27%), Positives = 398/843 (47%), Gaps = 94/843 (11%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNS-AVSGQL 59
G A Q + E+ + ++QT A +M+ + PL L+ D+A L V L
Sbjct: 25 GPAKKQARNLKPSSDFEKVKHNIDQTRAISNIMRLKGPLPLTDFADVAPALKRLKVKANL 84
Query: 60 LSP--SEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG 117
P I V + +N+ + E E+D S+ Y L++ + L+ I
Sbjct: 85 NGPEIGNIFLVLSLAKEINHFTQDF-EDREIDTTSIDEYLDDLQVDDDL--FNALKRAIE 141
Query: 118 FCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITK 173
F D +LD ASE L +R + N ++ + +++ + G K L IT
Sbjct: 142 F--DGS---VLDTASEKLARLRHDINANEIDIKNHMQR-----YVKGNSTKYLSEGIITI 191
Query: 174 RRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI 233
R R V +K +K G+ + S+SG T F+EP+ + NN + L E E AI
Sbjct: 192 RDGRYVVPVKQEYKNKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQDLLAQERQEVRAI 250
Query: 234 LSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIE 293
L L+ I + E+ ++++D A++ A+ M PIL+ D + ++
Sbjct: 251 LDHLSRLITQYLDEVSANAKALMQLDFLSAKSKLAKDMHATEPILTK------DQVVELK 304
Query: 294 GIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRV 353
+HPL+ +P K V DI++
Sbjct: 305 KARHPLI---------------DPKKV--------------------VANDIELGKSFDT 329
Query: 354 VVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLS 413
++ITGPNTGGKT ++KTLGL LM+++GL++ A ++ F I ADIGD QS+EQ+LS
Sbjct: 330 MLITGPNTGGKTITLKTLGLLQLMAQSGLFITANEESKVGVFQEIYADIGDEQSIEQSLS 389
Query: 414 TFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHY 473
TFS H+ +I+ I+ V+ + LVLIDE+G+GTDP EG +LA +IL YL+ + V+TTHY
Sbjct: 390 TFSSHMDQIIKIMRNVTNQDLVLIDELGAGTDPEEGASLAIAILDYLQAKDCKIVITTHY 449
Query: 474 ADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQK 533
+L + NA+ EF ++TL PTY++ G G SNA IA +G D+ ++ A+
Sbjct: 450 PELKLYGYNRVKTTNASMEFDIKTLSPTYKLRIGIPGQSNAFAIASHLGMDKTVVDAARS 509
Query: 534 LVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRA 593
LV + + + + + L ++ +K ES +T + ++L R+++D +++
Sbjct: 510 LV-----KDEDSDINRMIERLSDQTKKAESLRQTLEKKVDQSIELQRKLQDGLDWYNQQV 564
Query: 594 AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
K ++ + + + + D ++ D ENQ R + + N +I +++ A+ ++ +
Sbjct: 565 NRQLEKAQEKANEIIAKKREKADKIIADLENQRRSGAQIKTNKII-DAKGALNSLEKESN 623
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
+ V + + G+ V V S G ++ + + + + VQ G ++V+ +
Sbjct: 624 NLANNRVLQREKRRHDVKVGDTVKVLSYG-QMGHITKKLSEHE-YEVQIGILKVKASDRD 681
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
I + + P P+ + +Q R +S G R Q + LDLRG R EE
Sbjct: 682 I--------EKTSLPKPK-KSEQIVR-----------SSKGLRSQNVRAELDLRGQRYEE 721
Query: 774 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTV 831
A LD I A + + +IHG+GTG ++ V + L+ + V + +P N G T
Sbjct: 722 AMTNLDRYIDAALLSGLNTVTIIHGIGTGAIRNGVNQYLKRNRHVKDFGY-APANEGGTG 780
Query: 832 AYI 834
A I
Sbjct: 781 ATI 783
>gi|262067259|ref|ZP_06026871.1| DNA mismatch repair protein MutS [Fusobacterium periodonticum ATCC
33693]
gi|291379033|gb|EFE86551.1| DNA mismatch repair protein MutS [Fusobacterium periodonticum ATCC
33693]
Length = 778
Score = 252 bits (644), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 220/814 (27%), Positives = 375/814 (46%), Gaps = 152/814 (18%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L + + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRVFKARL--------DELGKYKQLRDTIGNIPNLRMIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
I+ + I D AS DL IR +K N+ +++ + A + +IT+R
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKKTLNMNIKRKFEELFDEPSLANAFQERIITERDG 192
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
RM +K K L+ GI + SSSG T F+EP V NN L E E IL L
Sbjct: 193 RMVTPVKFDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKIL-L 250
Query: 237 LTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
AE+ ++ R+ I + D+ L +D+ A++ +A +D C I + VS +++E
Sbjct: 251 RIAELLRNNRDDILAIGDKALYLDILNAKSIYA--VDNKCEIPT----VSNREVLSLEKA 304
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
+HP + D VP+ ++ + +++
Sbjct: 305 RHPFI-----------------------------------DKDKVVPLTFEIGKDYDILL 329
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+LS+F
Sbjct: 330 ITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSF 389
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
S H+ + +IL V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TTHY+
Sbjct: 390 SAHLKNVKEILAGVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKAKSFITTHYSQ 449
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA---- 531
+ + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 450 VKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKARAYI 509
Query: 532 -------QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAE------IMDL 578
+K++E ++ + Q+ + + +EE +L+ + +L E I
Sbjct: 510 SEDNKKVEKMIENIKTKSQELDEMRERFARLEEEARLDRERAKQETLIIEKQKNEIIKAA 569
Query: 579 YREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFENQLRDA 629
Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 570 YEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM------------------- 610
Query: 630 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
+++ ++E ++ +V+ + +F V G++V VKS+ ++ A ++
Sbjct: 611 ----LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQFANIL 653
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPRLRKQQEDRQSGSAG 745
++ ++ VQ G +++ V I+ + K K N P
Sbjct: 654 KINTSKESASVQAGILKLEVPFEEIKIVEEKKEKVYNVNTHKKTP--------------- 698
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
++ +DLRG V+E ++L+ L A + ++VIHG GTG ++
Sbjct: 699 --------------VRSEIDLRGKMVDEGIYELETYLDRATLNGYTEVYVIHGKGTGALR 744
Query: 804 ERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
E +L+ L+ V +Y GCTV +K
Sbjct: 745 EGILKYLKTSKYVKEYRVGGHGEGGLGCTVVTLK 778
>gi|294617527|ref|ZP_06697157.1| MutS2 family protein [Enterococcus faecium E1679]
gi|291596133|gb|EFF27396.1| MutS2 family protein [Enterococcus faecium E1679]
Length = 786
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 212/728 (29%), Positives = 349/728 (47%), Gaps = 111/728 (15%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+ D AS +L+ IR +R+ E LD +++ A+ + +IT R R + +
Sbjct: 146 VTDDASPELKSIRQNIRRSEQAVREQLDGIVRGKNAKY-----LSDAIITMRNDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAI---LSLLTA 239
K ++ + G+ + S+SG T F+EPK V+ NN RL +IAE I LS L+A
Sbjct: 201 KQEYRGVF-GGVVHDQSASGQTLFIEPKQVVDLNN---RLRQYQIAERNEIQRILSELSA 256
Query: 240 EIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPL 299
E+ +EI + + ++DL A+A F + + + P +S +HV + +HPL
Sbjct: 257 ELVPHRQEIIHNAYVIGKMDLMNAKARFGKEVKAIVPGISEDNHVVLKQA------RHPL 310
Query: 300 LLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGP 359
+ + E V + DI + + + +VITGP
Sbjct: 311 I-----------------------DQEKVVSN------------DITIGKDYQAIVITGP 335
Query: 360 NTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHI 419
NTGGKT ++KTLGL LM +AGL +PA ++ F+ + ADIGD QS+EQ+LSTFS H+
Sbjct: 336 NTGGKTITLKTLGLLQLMGQAGLPIPAGEESQIGIFEEVFADIGDEQSIEQSLSTFSSHM 395
Query: 420 SRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCL 479
+ VDIL V+ +SLVL DE+G+GTDP EG ALA +IL L + + TTHY +L
Sbjct: 396 TNTVDILSKVNEKSLVLFDELGAGTDPQEGAALAIAILDDLGKKSAYVMATTHYPELKVY 455
Query: 480 KDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLR 539
NA+ EF ++TL PTYR+L G G SNA I+ +G D ++I A++L+
Sbjct: 456 GYNRANTINASMEFDVDTLSPTYRLLIGVPGRSNAFEISSRLGLDTEVIDEAKQLM---- 511
Query: 540 PERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAK 599
++ Q L E LE++ + A + + E+ E ++ DL ++ +
Sbjct: 512 --------NDESQDLNEMITDLENRRKMAETEYLEMRHFVSEAQELHDDLKEAYSYFFEE 563
Query: 600 ETQQVQQELNFAKVQIDTVVQDFENQLRDASAD--EINSLIKESESAIAAIVEAHRPDDD 657
+++++ A + VV + E + AD ++ I + +++A +
Sbjct: 564 REKEMEKAKKKA----NEVVSEAEEKAEKIIADIRKMQQQIGQGNVKEHQLIDAKTQLAN 619
Query: 658 FSVSET---------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
ET T + G++V V + G + + + + + V+ G +++
Sbjct: 620 LHQEETLKKNKVLKKAKEQKTLKPGDEVLVTTYGQRGMLLRK---NGNQWQVEIGILKMN 676
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V ++ + P+ AP Q+E Q +E +S+ P N LDLRG
Sbjct: 677 VSEDELTPV-----------AP----QKEPTQRVIHAVRSESSSHVP------NQLDLRG 715
Query: 769 MRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA ++D L A + ++HG GTG +++ + + L+NH V +E +P N
Sbjct: 716 KRYEEALSEVDQYLDSAILAGYPQVTIVHGKGTGALRKGITDYLKNHRSVKSFEF-APAN 774
Query: 827 YGCTVAYI 834
G A I
Sbjct: 775 QGGNGATI 782
>gi|229087099|ref|ZP_04219249.1| hypothetical protein bcere0022_36710 [Bacillus cereus Rock3-44]
gi|228696167|gb|EEL49002.1| hypothetical protein bcere0022_36710 [Bacillus cereus Rock3-44]
Length = 786
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 237/810 (29%), Positives = 382/810 (47%), Gaps = 103/810 (12%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
L I DI + A G +LSP E+ + T+ + K+ E +G L P+L
Sbjct: 65 LGGIFDIRPNVKRAKIGSMLSPHELLDIASTMYGSRQM-KRFIEDMVDNGVEL----PIL 119
Query: 101 E-LLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERK----RNMENLDSLLKK 155
E + L +LE+KI CI + LD AS+ L IR + + R E L+++ +
Sbjct: 120 ETYVAQIVSLYDLEKKITSCIGDGGEV-LDSASDKLRGIRNQIRTAESRIREKLENMTRS 178
Query: 156 VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEF 215
AQ + I +T R R + +K ++ + GI + S+SG T F+EP+ VE
Sbjct: 179 SNAQKMLSDAI----VTIRNDRYVIPVKQEYRGVY-GGIVHDQSASGQTLFIEPQVIVEL 233
Query: 216 NNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVC 275
NN E E IL +LT E+A + ++ + +D FA+A +A+ +
Sbjct: 234 NNALQEARVKEKQEVERILMMLTEEVAVEADIVLANVEVIANLDFIFAKALYAKRIKATK 293
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
PI++++ ++ + +HPL+ +P
Sbjct: 294 PIVNNERYMDLRQA------RHPLI---------------DP------------------ 314
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
VP DI + + +VITGPNTGGKT ++KT+G+ LM+++GL++P + + F
Sbjct: 315 --KIIVPNDIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVLDESEICVF 372
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
I ADIGD QS+EQ+LSTFS H+ IVDILE ESLVL DE+G+GTDP EG ALA S
Sbjct: 373 KNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAIS 432
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL + +R V TTHY +L + NA+ EF + TL PTY++L G G SNA
Sbjct: 433 ILDEVYNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAF 492
Query: 516 NIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
I+K +G ++I RA+ + + + E + E ++ E + E + + LH
Sbjct: 493 EISKRLGLSDRVIDRARNHISTDTNKIENMIAKLEESQKNAEREWNEAEEHRKQSEKLHR 552
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS-AD 632
E+ E DE R LKA+ ++ ++++ AK + + ++ + QLR A A+
Sbjct: 553 ELQRQIIEFNDE-----RDERLLKAQ--KEGEEKVEAAKKEAEGIIHEL-RQLRKAQLAN 604
Query: 633 EINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ---FGEQVHVKSLGDKLATVV 689
+ + E++S + E P+ ++ Q G++V V + G K +
Sbjct: 605 VKDHELIEAKSRL----EGAAPELVKKQKVKVKNTAPKQQLRAGDEVKVLTFGQKGQLLK 660
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
+V D+ VQ G ++++VK++++ I N+ P E + + +
Sbjct: 661 KV--SDNEWNVQIGILKMKVKESDMEYI------NSPQPV-------EKKAVATVKGRDY 705
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 807
S LDLRG R E A +++ L A S + +IHG GTG +++ V
Sbjct: 706 HVSL---------ELDLRGERFENAMVRVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQ 756
Query: 808 EILRNHPRVA--KYEQESPMNYGCTVAYIK 835
+ L+ H V +Y G TV +K
Sbjct: 757 DYLKKHRGVKNFRYGDMGEGGLGVTVVELK 786
>gi|408411562|ref|ZP_11182705.1| MutS2 protein [Lactobacillus sp. 66c]
gi|407874274|emb|CCK84511.1| MutS2 protein [Lactobacillus sp. 66c]
Length = 788
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 220/743 (29%), Positives = 346/743 (46%), Gaps = 142/743 (19%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+LD AS L +R +R N E +++ + +Q + + ++T R R + +
Sbjct: 149 VLDTASAALASLRHDRLANETEIKEKMNAYTRGKMSQY-----LSEAVVTIRDDRYVIPV 203
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++Y G+ + S+SG T F+EP+ + NN L E E IL L+
Sbjct: 204 KQEYRYKFG-GVVHDQSASGQTLFVEPEAILVLNNRLQNLLAEERQEIHRILHDLSLAAG 262
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ I+ + + ++D A+A A+ M +SQ ++ D S+ + +HPL+
Sbjct: 263 EERETIQLVAGALSQLDFLSAKAKLAKKMR------ASQPAITTDQSVKLLAARHPLI-- 314
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
+P K V DI + + V+ITGPNTG
Sbjct: 315 -------------DPAKV--------------------VANDICLGQDFDTVLITGPNTG 341
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGL SLM+++GL++PA ++ FD I ADIGD QS+EQ+LSTFS HI+ I
Sbjct: 342 GKTITLKTLGLLSLMAQSGLFIPAAEGSQVAIFDQIFADIGDEQSIEQSLSTFSSHITDI 401
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V I++ V+ +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 402 VAIMKKVTSKSLVLIDEIGAGTDPEEGASLAISILDFFRKKQAKIMVTTHYPELKLYGYS 461
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+ +
Sbjct: 462 RERTTNASMEFDMKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVLDAEKLMSDDDSDI 521
Query: 543 QQHRKSELYQSL---MEERRKLESQARTAASLHAEI---MDLYREIEDEAKDLDRRAAHL 596
H EL + E R+KL+S A +L ++ +D+Y
Sbjct: 522 N-HMIDELNKQTKLATENRQKLQSSLDRAKNLEKQLRDALDIY----------------- 563
Query: 597 KAKETQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEI 634
Q+VQ++L+FA + + D ++ D E NQL DA E
Sbjct: 564 ----NQRVQKQLDFAQERANEIVAKKRKKADKIIADLEEARKNGANIKENQLMDAKG-EF 618
Query: 635 NSLIK-ESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
N L K E+ A +++ + +V G++V V S G + TV + G
Sbjct: 619 NQLAKQEANLAKNKVLQKEKKRHHVAV------------GDKVKVLSYG-QTGTVTKKLG 665
Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 753
D + V G+++++V +I + S G A+
Sbjct: 666 DHEYE-VALGRIKLKVSDRDIDKLAAS----------------------GDGRGKVRATS 702
Query: 754 GPRVQTSKNSLDLRGMRVEEASHQLDIALACW--ESRSVLFVIHGMGTGVVKERVLEILR 811
R +++ LDLRG R EEA LD + S + ++HG+GTG +++ V + L+
Sbjct: 703 ASRSSRARSQLDLRGQRYEEAMINLDRYFDTFLLSGLSTVTIVHGIGTGAIRQGVQQYLK 762
Query: 812 NHPRVAKYEQESPMNYGCTVAYI 834
+ V + +P N G T A I
Sbjct: 763 RNKHVKSFAY-APANEGGTGATI 784
>gi|319946241|ref|ZP_08020481.1| DNA mismatch repair protein MutS [Streptococcus australis ATCC
700641]
gi|417919657|ref|ZP_12563185.1| MutS2 family protein [Streptococcus australis ATCC 700641]
gi|319747623|gb|EFV99876.1| DNA mismatch repair protein MutS [Streptococcus australis ATCC
700641]
gi|342832285|gb|EGU66584.1| MutS2 family protein [Streptococcus australis ATCC 700641]
Length = 778
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 243/841 (28%), Positives = 388/841 (46%), Gaps = 120/841 (14%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
P K L A ++ + TI++I + L+ E+ AV++
Sbjct: 36 PLAKKEAIETAFLEMADMAQIFVEHPHFSVPTIQEIRPVTKRLELETSLNIDELLAVKKV 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQR-YSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDR 130
LR + + E + + L R + L++L + L + E GF I +
Sbjct: 96 LRVTHELRNFYDELENVRLEKLDRIFENLVDLPQLQGSLHAINEA-GF--------IENF 146
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
ASE L IR + N + +L+++ ++ + ++ R R + +K +++ +
Sbjct: 147 ASETLAKIRRRIQENEHQVRDILQELLKS--KSEMLADQVVASRNGRNVLPVKNTYRNRI 204
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER---- 246
G+ ++S+SG T ++EP+ V N ++N E +L +L EI+ R
Sbjct: 205 A-GVVHDISTSGNTVYIEPRAVVNLNE---EIANHRADERFEMLRIL-EEISNLLRPHAG 259
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
EI+ + IDL A+ F Q G P LS+Q I + ++HPL+
Sbjct: 260 EIRNNAWLIGHIDLVRAKHRFLQDRKGTIPALSAQG------EIQLLQVRHPLI------ 307
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+ VP DI + +VITGPNTGGKT
Sbjct: 308 -------------------------------EKAVPNDIHFGKDLTEIVITGPNTGGKTI 336
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
+KTLGLA LM+++GL + A ++ F I +DIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 337 MLKTLGLAQLMAQSGLPILADTGSKVAVFTQIFSDIGDEQSIEQSLSTFSSHMTNIVSIL 396
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
E V ESLVL+DE+G+GTDP EG +LA +IL+ LR R + TTHY +L +
Sbjct: 397 EQVDEESLVLLDELGAGTDPQEGASLAIAILEDLRLRGIKTMATTHYPELKAYGIETLGV 456
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
+NA+ EF ++LRPTYR + G G SNA IA+ +G I+++AQ + + +R +R
Sbjct: 457 QNASMEFDTDSLRPTYRFMQGVPGRSNAFEIARRLGLSEVIVRQAQGMTNQ---DRDVNR 513
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
E ++ + LES+ R +D R++E E +R L + T++ +
Sbjct: 514 IIEKLEA-----QTLESRKR---------LDSIRDVEQENLKFNRVLKKLYNELTRERET 559
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADEI-NSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
ELN A+ + +V L A +D+I L +S+ I+EA S +
Sbjct: 560 ELNKARKEAQEIV-----DLALAESDQILQGLHAKSQLKPHEIIEAKSQLKKLSPETVDL 614
Query: 666 S----------SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
S + P+ G+++ V S G + + ++ V KM + K+ N+
Sbjct: 615 SKNKVLKQAKKARAPKVGDEILVISYGQRGSLTKQLKDGRWEAQVGLIKMTLEEKEFNLL 674
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
K+A+ P + RQ SN GPR + LDLRG R EEA
Sbjct: 675 ----KAEKDASQP--------KKRQVHVVKRSN---VNGPRAR-----LDLRGKRYEEAM 714
Query: 776 HQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAY 833
+LD I A + + + +IHG+GTGV++E V + LR + V +E +P N G + A
Sbjct: 715 EELDSFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFEY-APQNAGGSGAT 773
Query: 834 I 834
I
Sbjct: 774 I 774
>gi|166030474|ref|ZP_02233303.1| hypothetical protein DORFOR_00135 [Dorea formicigenerans ATCC
27755]
gi|166029726|gb|EDR48483.1| MutS2 family protein [Dorea formicigenerans ATCC 27755]
Length = 792
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 198/660 (30%), Positives = 312/660 (47%), Gaps = 81/660 (12%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R C+ +KA ++ +P G+ + SS+G+T F+EP V+ NN L E
Sbjct: 187 PIITMRGDRYCIPVKAEYRGQVP-GMIHDQSSTGSTLFIEPMAVVKLNNDLKELYGKEQE 245
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+A+ A+ EI+ + E+D FAR A M+ P+ + + +
Sbjct: 246 EIQVILARLSADAAEYVSEIRTDYATLTELDFIFARGALALDMNASKPMFNQERRIRIRE 305
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
+HPLL + VPI + +
Sbjct: 306 G------RHPLLDKKKV-----------------------------------VPISLTLG 324
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+ ++++TGPNTGGKT S+KT+GL LM +AGL++PA + L F + ADIGD QS+
Sbjct: 325 EDFDLLIVTGPNTGGKTVSLKTVGLFQLMGQAGLHIPALDRSELGVFREVYADIGDEQSI 384
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQNLSTFS H++ +V ++ V +SLVL DE+G+GTDP+EG ALAT+IL +L + +
Sbjct: 385 EQNLSTFSSHMTNVVSFIKQVDEDSLVLFDELGAGTDPTEGAALATAILNHLHCQGIRTM 444
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA+ EF +ETLRPTYR+L G G SNA IA +G II
Sbjct: 445 ATTHYSELKVYALSTPGVENASCEFDVETLRPTYRLLLGIPGKSNAFAIAGKLGLPDYII 504
Query: 529 QRAQ-KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAK 587
+ A+ L E Q +L L RR + + A+ E+ L +E + +
Sbjct: 505 EEAKTHLTE------QDESFEDLLTDLESSRRTIAKEQEEIAAYRRELEALKQETAQKKE 558
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINS----LIKESE 642
L+ + + + ++ L AK D +++F + + SA E+ L K+ E
Sbjct: 559 KLEEQRDRILREANEKAHAILADAKETADETMRNFHKFGKANVSATEMEKERERLRKKME 618
Query: 643 SAIAAIV-EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
+ E +P + S+ + GE V V S+ + TV +P ++VQ
Sbjct: 619 KTREGMTEEVKKPKKQYKPSDF-------KLGETVKVLSM-NLTGTVHSLPDTKGNLMVQ 670
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G + +V +++ + + P K+ R S + S P +
Sbjct: 671 MGILSSKVHISDLEIV---------DEKPAYLKKTAARTSKGKVKMGKSLSVSPEI---- 717
Query: 762 NSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+L G V+EA +LD L A + + V+HG GTG ++ + + L+ V Y
Sbjct: 718 ---NLLGKTVDEAVAELDKYLDDASLAHLTSVRVVHGKGTGALRAGIHQYLKRQKHVKSY 774
>gi|104774409|ref|YP_619389.1| DNA mismatch repair protein MutS2 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423490|emb|CAI98392.1| DNA mismatch repair protein MutS2 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 787
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 227/738 (30%), Positives = 344/738 (46%), Gaps = 132/738 (17%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
+ H EL + + + E++ + SL D AK L+++
Sbjct: 519 DI-NHMIDELNK---QTKLATENKQKLQTSL------------DRAKQLEKKLQDALDIY 562
Query: 601 TQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEINSLI 638
Q+VQ++L+FA + + D V+ + E NQL DA E N L
Sbjct: 563 NQRVQKQLDFALDRANEIVAKKRKKADKVIAELEEARKEGMQVKTNQLMDAKG-EFNQLA 621
Query: 639 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 698
K+ E +A V + Q G++V V S G + TV + G+ D
Sbjct: 622 KQ-EVNLAK----------NKVLQKEKKRHHVQVGDKVKVLSYG-QTGTVTKQLGEHDYE 669
Query: 699 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 758
V G+++++V I + +++ A A+ R
Sbjct: 670 -VSLGRIKLKVTDRYIDKLAAGQKQQA----------------------QRRATSASRSS 706
Query: 759 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
+++SLDLRG R EEA LD S + +IHG+GTG +++ V + L+ + V
Sbjct: 707 RARSSLDLRGQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHV 766
Query: 817 AKYEQESPMNYGCTVAYI 834
Y +P N G T A I
Sbjct: 767 KTYSY-APANEGGTGATI 783
>gi|402313005|ref|ZP_10831928.1| MutS2 family protein [Lachnospiraceae bacterium ICM7]
gi|400367581|gb|EJP20597.1| MutS2 family protein [Lachnospiraceae bacterium ICM7]
Length = 785
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 236/803 (29%), Positives = 370/803 (46%), Gaps = 120/803 (14%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L LS ++DI+ L G LS E+ V L A + + E D D L+ Y
Sbjct: 63 LALSEVKDISDSLKRLEIGSSLSQPELMKVLSILNAASKAITYGLHSEEEDYDVLEEYFR 122
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAA 158
L+ +K +L++++ CI + I+ D AS +L IR R ++ ++S +
Sbjct: 123 SLDEIK------DLKKELSRCIISEE-IMADNASPELSHIR----RKIKQINSKMHTELN 171
Query: 159 QIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
I A + +IT+R C+ IK+ +K + G+ + SS+G+T F+EP + N
Sbjct: 172 NILNAHREYLMDAVITQRDGAYCLPIKSEYKNKVS-GVVHDQSSTGSTVFIEPIAVIRMN 230
Query: 217 NMEVRLSNSEIAEETAIL---SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
N L+ E E IL SLL A+ +S RE ++ +D +A+A ++ M+
Sbjct: 231 NELKSLAMDEKKEIEKILENLSLLAAQYIESLREN---AKTLIFLDFVYAKANLSKKMNA 287
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
P +S+ + INI+ +HPLL +
Sbjct: 288 SEPKFNSKHY------INIKEGRHPLLDAKKV---------------------------- 313
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
VPI+I + +++ITGPNTGGKT S+KT+GL +LM ++GL++PA L
Sbjct: 314 -------VPINISLGEHYDLLIITGPNTGGKTVSLKTVGLFTLMGQSGLHIPAFEGSELS 366
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F + ADIGD QS+EQ+LSTFSGH+ IV IL SL L DE+ +GTDP+EG ALA
Sbjct: 367 VFSDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADANSLCLFDELCAGTDPTEGAALA 426
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
SIL +L + TTHY++L + ENA+ EF + TL PTYRIL G G SN
Sbjct: 427 ISILSFLHRMQSRCIATTHYSELKVFALNEPGVENASCEFDVATLSPTYRILIGVPGKSN 486
Query: 514 ALNIAKSIGFDRKIIQRA-----------QKLVERLRPERQQHRKSELYQSLMEERRKLE 562
A IA +G II A + L+ RL +RQ K +L S+ + +R++E
Sbjct: 487 AFAIAGKLGLPDYIISEADTHLEKDAKDFEDLLTRLENDRQTIEKDKL--SIQKYKREIE 544
Query: 563 SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQ----IDTV 618
S R + +I +EAK+ R+ +AKET + N K+ + +
Sbjct: 545 SLKRHYNKQEENLAARKEKILEEAKEAARKILE-EAKETADDTIK-NINKIASGAGLGSA 602
Query: 619 VQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHV 678
+++ +LR++ IN K +E V+A +P + + G+ VHV
Sbjct: 603 LEEQRTRLRES----INKNTKATEIK-QNTVKAKKPKE-------------LKLGDSVHV 644
Query: 679 KSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQED 738
SL V +P VQ G +R +V +++ + P+ + +
Sbjct: 645 ISLNLD-GIVSSLPNQSGNFFVQMGILRSQVNISDVALVE--------EPSTKPENKTRT 695
Query: 739 RQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHG 796
R S S+ T +++ G V+EA +LD L A + +IHG
Sbjct: 696 RSSSMVKSA-----------TISTEINVIGKNVDEACSELDKYLDDALLAHLPGVRIIHG 744
Query: 797 MGTGVVKERVLEILRNHPRVAKY 819
GTG +++ + L+ + Y
Sbjct: 745 RGTGALQKGIHAYLKRQTFIKSY 767
>gi|328956937|ref|YP_004374323.1| recombination and DNA strand exchange inhibitor protein
[Carnobacterium sp. 17-4]
gi|328673261|gb|AEB29307.1| recombination and DNA strand exchange inhibitor protein
[Carnobacterium sp. 17-4]
Length = 791
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 235/813 (28%), Positives = 382/813 (46%), Gaps = 132/813 (16%)
Query: 46 DIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKN 105
DI LN L ++I + RT +N ++ L E+ G + R L +
Sbjct: 82 DIGASLNG------LEIAQIGKILRTTTELNRFFENLKES----GIEMNRLYDLAD---- 127
Query: 106 CNFLTE--LEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMEN----LDSLLKKVAAQ 159
NF+T L + I +D I LD AS L+ +R KR N LD +++ +AQ
Sbjct: 128 -NFVTTPTLNQLIRETVDEDGHI-LDDASPALKGVRTGIKRGENNVREKLDGIVRGKSAQ 185
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ +IT R R + +K ++ G+ + SS+G T F+EP+ VE NN
Sbjct: 186 Y-----LSDAIITIRNDRYVIPVKQEYRSHF-GGVVHDQSSTGQTLFVEPQSVVELNNRL 239
Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
+L E E IL+ ++ EIA ++I M + ++D A+A +A+ + P++
Sbjct: 240 RQLQIEERREVDRILAEISNEIAPYSKDILNNMFLLGKLDFIGAKASYAKNVAANRPLIH 299
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
++ V S+ +HPLL + E V +
Sbjct: 300 EENEVKLLSA------RHPLL-----------------------DPETVVAN-------- 322
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
DI + E + V+ITGPNTGGKT +KTLGL LM +AGL +P ++ F I
Sbjct: 323 ----DILIGGENQAVIITGPNTGGKTIILKTLGLLQLMGQAGLQIPVAPESQIGLFTEIF 378
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+EQ+LSTFS H++ IV IL+ + +SL++ DE+G+GTDP EG ALA +IL
Sbjct: 379 ADIGDEQSIEQSLSTFSSHMTNIVSILDRMDNKSLIIFDELGAGTDPQEGAALAIAIL-- 436
Query: 460 LRDRVG----LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
D+VG +VT+HY +L + NA+ EF ++TL PTYR+L G G SNA
Sbjct: 437 --DKVGAVGSYVMVTSHYPELKAYGYNRPQTINASMEFDVDTLSPTYRLLIGVPGRSNAF 494
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQ---------QHRKSELYQSLMEERRKLESQAR 566
I+K +G ++I A++L++ E Q ++R+ +E R ++ +
Sbjct: 495 EISKRLGLSEEVIDSARQLID---GESQNLNEMISDLENRRKMAETEYLEVRHYVDEAEQ 551
Query: 567 TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL--NFAKVQIDTVVQDF-E 623
L + Y E E+ K +A L +ET++ ++ + K QI ++ E
Sbjct: 552 LHTDLQTAVQQFYAEREELMKKAREKANSL-VEETEETADQIIKDLRKKQIQGHYENVKE 610
Query: 624 NQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGD 683
++L DA +++ L +E A +++ + P G+ V V+S G
Sbjct: 611 HELIDAKT-QLSGLRQEEALAKNKVLKKAKA----------KQVMKP--GDDVMVQSFGQ 657
Query: 684 KLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
K V+ D + +VQ G +++++K++++ K N R+ +
Sbjct: 658 K--GVLMERADKNHWVVQMGMLKMKLKESDLTLTEPEKEPN--------------RKMIA 701
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
+ S + P+ LDLRG R E A +LD L A + + ++HG GTG
Sbjct: 702 SVRSESNSHVSPQ-------LDLRGERYENALAELDRYLDAALLANYPQVTIVHGKGTGA 754
Query: 802 VKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
+++ V E L+ HP + ++ +P N G A I
Sbjct: 755 IRQGVTEALKRHPSIKEFHY-APPNQGGNGATI 786
>gi|385813225|ref|YP_005849618.1| MutS2 protein [Lactobacillus helveticus H10]
gi|323465944|gb|ADX69631.1| MutS2 protein [Lactobacillus helveticus H10]
Length = 785
Score = 252 bits (643), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 213/738 (28%), Positives = 349/738 (47%), Gaps = 127/738 (17%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
+LD AS L +R + + N E++ + + + G K L +T R R + +
Sbjct: 146 VLDTASNALARLRHDMRSNEEDIKNRM-----DAYTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L++
Sbjct: 201 KQEYRGKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSSLAR 259
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ I + + + +D A+A A+ M P L+ D S+ + +HPL+
Sbjct: 260 EEINSINNIANSLTRLDFLQAKAKLAKEMKASKPKLTQ------DHSLELRNARHPLI-- 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
+P K VP DI++ ++ ++ITGPNTG
Sbjct: 312 -------------DPEKV--------------------VPNDIRLGGDSDTMLITGPNTG 338
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+ I
Sbjct: 339 GKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKEVYADIGDEQSIEQSLSTFSSHINDI 398
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
+ I++ V +E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 399 IAIMKNVDKETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGYN 458
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 459 RPRTINASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------- 511
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
S++ + + KL +Q + A + + D ++ L+++ Q
Sbjct: 512 -SDEDSDINKMIA----KLNAQTKAATTARNRLETSL----DRSQKLEQKLQQALDWYNQ 562
Query: 603 QVQQELNFAKVQIDTVVQDF--------------------ENQLRDASADEINSLIKESE 642
+VQ++L+FA+ + + VV EN++ +A E+NSL +++
Sbjct: 563 RVQKQLDFAQERANEVVAKRRKKADKIIAELEKQKNVGVKENKIIEAKG-ELNSLERQAH 621
Query: 643 S-AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
+ A +++ + SV G+QV V S G + T+ + + + VQ
Sbjct: 622 NLAHNKVLQREKRRHHVSV------------GDQVKVLSYG-QTGTITKKLSEHE-YEVQ 667
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G ++V+V +I I KN A P +L + A+ R +
Sbjct: 668 MGIIKVKVSDRDIERIA----KNNAQPKKKLVR----------------ATSAIRRSNAH 707
Query: 762 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVA 817
+ LDLRG R +EA LD I A ++ +IHG+GTG +++ V + LR NH +
Sbjct: 708 SELDLRGQRYDEAMTNLDRYIDSALLAGLDIVTIIHGIGTGAIRKGVWQYLRSSNHVKGF 767
Query: 818 KYEQESPMNYGCTVAYIK 835
Y + G T+ +K
Sbjct: 768 NYAPANEGGNGATIVKLK 785
>gi|331002566|ref|ZP_08326082.1| hypothetical protein HMPREF0491_00944 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330408294|gb|EGG87770.1| hypothetical protein HMPREF0491_00944 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 785
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 239/821 (29%), Positives = 381/821 (46%), Gaps = 115/821 (14%)
Query: 19 ESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E QK + T+AAL ++ + L LS ++DI+ L G LLS E+ + L A +
Sbjct: 42 EIQKNQSHTTAALDRIRLKGSLSLSEVKDISDSLKRLEIGSLLSQPELMKILSILNAASK 101
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
E D D L+ Y L+ +K +L++++ CI + I+ D AS +L
Sbjct: 102 AISYGLHFDEEDYDILEEYFSALDEIK------DLKKELSRCIISEE-IMADNASPELSH 154
Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR R ++ ++S + I A + +IT+R C+ IK+ +K + G+
Sbjct: 155 IR----RKIKQINSKMHTELNNILNAHREYLMDAVITQRDGAYCLPIKSEYKNKVS-GVI 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL---SLLTAEIAKSEREIKYLM 252
+ S++G+T F+EP ++ NN L E E IL SLL+A+ + R+
Sbjct: 210 HDQSATGSTVFIEPIAVIKMNNELKSLFMDEKKEIEKILENLSLLSAQYIEPLRQN---A 266
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
++ +D +A+A ++ M+ P +S+ + INI+ +HPLL +
Sbjct: 267 KTLIFLDFVYAKANLSKKMNASEPKFNSKHY------INIKEGRHPLLDTKKV------- 313
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
VPI+I + +++ITGPNTGGKT S+KT+G
Sbjct: 314 ----------------------------VPINISIGDNYDLLIITGPNTGGKTVSLKTVG 345
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L +LM ++GL++PA L FD + ADIGD QS+EQ+LSTFSGH+ IV IL
Sbjct: 346 LFTLMGQSGLHIPAFEGSELSVFDNVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADAN 405
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SL L DE+ +GTDP+EG ALA SIL +L + TTHY++L + ENA+ E
Sbjct: 406 SLCLFDELCAGTDPTEGAALAISILSFLHRMKSRCIATTHYSELKVFALNEPGVENASCE 465
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPE 541
F + TL PTYRIL G G SNA IA +G II A + L+ RL +
Sbjct: 466 FDVATLSPTYRILIGVPGKSNAFAIAGKLGLPDYIISEADTHLEKDAKDFEDLLTRLEND 525
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
RQ K +L S+ + +R++ES R + +I DEA++ R+ +AKET
Sbjct: 526 RQIIEKDKL--SIQKYKREIESLKRHYDKQEENLALRKEKILDEAREAARKLLE-EAKET 582
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAI-AAIVEAHRPDDDFSV 660
DT+ +N + AS + S ++E + + +I + R +
Sbjct: 583 AD------------DTI----KNINKIASGAGLGSALEEQRTRLRESINKNTRTMEIAQP 626
Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
S+ + G+ VHV SL V +P VQ G +R +V +++ +
Sbjct: 627 SKKVKKPKELKLGDSVHVISLNLD-GIVSSLPNQSGNFFVQMGILRSQVNISDVALV--- 682
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
+ + P+ R + +S + T +++ G V+EA +LD
Sbjct: 683 -EEKSVKTEPKARSK---------------SSSMVKSATISTEINVIGKNVDEACSELDK 726
Query: 781 AL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
L A + +IHG GTG +++ + L+ + Y
Sbjct: 727 YLDDALLAHLPGVRIIHGRGTGALQKGIHAYLKRQSFIKSY 767
>gi|289766107|ref|ZP_06525485.1| DNA mismatch repair protein mutS [Fusobacterium sp. D11]
gi|289717662|gb|EFD81674.1| DNA mismatch repair protein mutS [Fusobacterium sp. D11]
Length = 778
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 220/815 (26%), Positives = 386/815 (47%), Gaps = 154/815 (18%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V KL D L +Y L E++ N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSKL--------DELGKYKQLREMIGNIPNLRVIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A P +S++ +S + +
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENRCEIPTVSNREILSLEKA-- 304
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+HP + D VP+ ++ +
Sbjct: 305 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R L+ + +L E
Sbjct: 506 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564
Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
A ++++ ++ +VQ G +++ V P ++ +E ++
Sbjct: 649 FANILKINTSKESAMVQAGILKLEV------------------PFDEIKVVEEKKEKVYN 690
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
+++++ ++ +DLRG V+EA ++L+ L A + ++VIHG GTG +
Sbjct: 691 MNTHKKTPV-------RSEIDLRGKMVDEAVYELETYLDRATLNGYTEVYVIHGKGTGAL 743
Query: 803 KERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+E +L+ L+ V +Y GCTV +K
Sbjct: 744 REGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|313889740|ref|ZP_07823382.1| MutS2 family protein [Streptococcus pseudoporcinus SPIN 20026]
gi|416851675|ref|ZP_11908820.1| MutS2 family protein [Streptococcus pseudoporcinus LQ 940-04]
gi|313121785|gb|EFR44882.1| MutS2 family protein [Streptococcus pseudoporcinus SPIN 20026]
gi|356739164|gb|EHI64396.1| MutS2 family protein [Streptococcus pseudoporcinus LQ 940-04]
Length = 777
Score = 251 bits (642), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 207/719 (28%), Positives = 346/719 (48%), Gaps = 108/719 (15%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L IR R M + ++ ++++ I + G + + LI R R + +K ++++
Sbjct: 147 ASPELATIR----RKMTDSENQVRQLLQDILKKYGNFLSESLIASRNGRSVLPVKNTYRH 202
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ G+ ++S+SG T ++EP+ V+ N +L E E T IL L+ + R +
Sbjct: 203 KVA-GVVHDISASGNTVYIEPRALVQLNEEITQLHADERHEITRILKSLSDMLRPHSRAL 261
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ +D A+ + + P +S D SI + ++HPLL
Sbjct: 262 TNNAWLIGHLDFVKAKYCYLRDYKASLP------KISVDKSIQLLNVRHPLLKN------ 309
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
PVP D+ + V+VITGPNTGGKT +
Sbjct: 310 -------------------------------PVPNDLHFSRQLSVIVITGPNTGGKTIML 338
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGLA +M ++GL + A + F+ I ADIGD QS+EQ+LSTFS H++ IV IL+
Sbjct: 339 KTLGLAQIMGQSGLPILADQGSTIAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVAILDE 398
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
+++SLVL DE+G+GTDP EG +LA +IL+ LR + TTHY +L + EN
Sbjct: 399 ANQDSLVLFDELGAGTDPQEGASLAMAILEQLRLTEIKTMATTHYPELKAYGIETAFVEN 458
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +L+PTY + G G SNA IA+ +G I+ +A+++ + S
Sbjct: 459 ASMEFDSRSLKPTYHFMQGVPGRSNAFEIARRLGLADPIVNQAEQMTD---------SDS 509
Query: 549 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
++ + + E E++ LES+ R +D +E+E + +R L + Q +E
Sbjct: 510 DVNRIIEELEKQTLESRHR---------LDHIKEVEQDNLKFNRAVKKLYYEFAQAKDKE 560
Query: 608 LNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSV 660
+ A ++ +V ++ +L +ASA + + +I E++ + +V P D +
Sbjct: 561 IEKASLEAQEIVNLALAESEEILAKLHEASALKPHQII-EAKGQLKKLV----PKTDLTK 615
Query: 661 SETNTSSFT---PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPI 717
++ + PQ G+ + V + G + + +V GD V KM + ++ + +
Sbjct: 616 NKVLKKAKKLRQPQAGDDILVTAYGQRGTLLKQVKGDKWEAQVGLIKMTLNEEEFQLVKV 675
Query: 718 PNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQ 777
+K P+ + ++S S+ GPR + LDLRG R EEA +
Sbjct: 676 AEESQK------PKKQTLNVIKRSTSS---------GPRAR-----LDLRGKRYEEAMQE 715
Query: 778 LD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK--YEQESPMNYGCTVA 832
LD I A + S + +IHG+GTGV++E V + LR H V Y ++ GCT+A
Sbjct: 716 LDAFIDQALVNNMSQVDIIHGIGTGVIREAVTKYLRRHKHVKSFGYAPQNAGGSGCTIA 774
>gi|336419167|ref|ZP_08599433.1| MutS2 protein [Fusobacterium sp. 11_3_2]
gi|336163858|gb|EGN66772.1| MutS2 protein [Fusobacterium sp. 11_3_2]
Length = 778
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 224/819 (27%), Positives = 381/819 (46%), Gaps = 162/819 (19%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V KL D L +Y L E + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSKL--------DELGKYKQLRETIGNIPNLRVIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A P +S++ +S + +
Sbjct: 248 IL-LRIAELLRNNKDDILIIGEKVMYLDILNAKSIYANENRCEIPTVSNKEILSLEKA-- 304
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+HP + D VP+ ++ +
Sbjct: 305 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R L+ + +L E
Sbjct: 506 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564
Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPRLRKQQEDRQ 740
A ++++ ++ +VQ G +++ V N I+ + K K N P
Sbjct: 649 FANILKINTSKESAMVQAGILKLEVPFNEIKVVEEKKEKVYNMNTHKKTP---------- 698
Query: 741 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMG 798
++ +DLRG V+EA ++L+ L A + ++VIHG G
Sbjct: 699 -------------------VRSEIDLRGKMVDEAVYELETYLDRATLNGYTEVYVIHGKG 739
Query: 799 TGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
TG ++E +L+ L+ V +Y GCTV +K
Sbjct: 740 TGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|410696398|gb|AFV75466.1| MutS2 family protein [Thermus oshimai JL-2]
Length = 743
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 220/678 (32%), Positives = 329/678 (48%), Gaps = 112/678 (16%)
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
I + IT RR R C+ ++A + +P GI L+ S SGAT F+EP V NN L
Sbjct: 169 IGERFITLRRERYCIPVRAGMAHKVP-GILLDESESGATLFVEPFSVVRLNNRLQSLRLQ 227
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVS 285
E E ILS LTA +A+ E G + ++ + + Q+ +
Sbjct: 228 EEEEVARILSELTALLAEDE--------------------GLSGTLEALGLLDLLQAQAA 267
Query: 286 FDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDI 345
+ + P G A +PL ++N PVP D+
Sbjct: 268 LARDLGL----RPPRFGEGY----ALKEAFHPL---IQN---------------PVPNDL 301
Query: 346 KVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDH 405
+++ R+++I+GPN GGKTA +KTLGLA LM++AGL++ A+ L W D I ADIGD
Sbjct: 302 RLDHARRLLLISGPNMGGKTALLKTLGLAVLMAQAGLFVAAREAT-LEWPDRIFADIGDE 360
Query: 406 QSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG 465
QSL+++LSTF+GH+ RI + LE + +SLVLIDE+GSGTDP EG ALA +IL+ L +
Sbjct: 361 QSLQESLSTFAGHLVRIKEALEGATEKSLVLIDELGSGTDPEEGAALAQAILERLLELGV 420
Query: 466 LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDR 525
VTTH + L NA+ +F L+TLRPTYR+L G G S A IA+ +G
Sbjct: 421 KGAVTTHLSPLKAFAQGREGILNASMQFDLKTLRPTYRLLLGVPGRSYAFAIARRLGLPE 480
Query: 526 KIIQRAQKLV-ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 584
++ RA+ L+ E R E +L ER+ LE+ A L AE+
Sbjct: 481 GVLARAEALLPEAGRLEGLLELLERERLALEGERKALEALKAEAERLRAELA------RK 534
Query: 585 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQ-LRDASADEINSLIKESES 643
EA + RA LKA E ++ + L + ++ + + + RDA +KE
Sbjct: 535 EALWEEERAERLKALE-REASERLKRLEAELKALRERARTEGKRDA--------LKE--- 582
Query: 644 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
+ A+ + P + S + +P V V SLG K VVE+ G++ LVQ G
Sbjct: 583 -VMALRARYLPKREPPPSPPGLAPGSP-----VEVPSLGQK-GRVVELLGEE--ALVQVG 633
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
+++R+K ++P+ ++ A A LR ++E ++
Sbjct: 634 PLKLRLKTAELKPL----KEEAPPKAVTLRPKREVKE----------------------- 666
Query: 764 LDLRGMRVEEASHQLDIALACWESR----SVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+DLRG+ VEEA ++D AL E+R S L ++HG GTG ++ + E LR RV +
Sbjct: 667 VDLRGLTVEEALLEVDHALE--EARALGLSTLRLLHGKGTGALRNAIREALRRDKRVESF 724
Query: 820 EQESP--MNYGCTVAYIK 835
P +G TV +K
Sbjct: 725 ADAPPNEGGHGVTVVVLK 742
>gi|294781853|ref|ZP_06747185.1| MutS2 protein [Fusobacterium sp. 1_1_41FAA]
gi|294481664|gb|EFG29433.1| MutS2 protein [Fusobacterium sp. 1_1_41FAA]
Length = 778
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 223/815 (27%), Positives = 375/815 (46%), Gaps = 154/815 (18%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L + + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRVFKARL--------DELGKYKQLRDTIGNIPNLRMIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
I+ + I D AS DL IR +K N+ +++ + A + +IT+R
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKKTLNMNIKRKFEELFDEPSLANAFQERIITERDG 192
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
RM +K K L+ GI + SSSG T F+EP V NN L E E IL L
Sbjct: 193 RMVTPVKFDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRKIL-L 250
Query: 237 LTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGI 295
AE+ ++ R+ I + D+ L +D+ A++ +A +D C I + VS +++E
Sbjct: 251 RIAELLRNNRDDILAIGDKALYLDILNAKSIYA--VDNKCEIPT----VSNREVLSLERA 304
Query: 296 KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVV 355
+HP + D VP+ ++ + +++
Sbjct: 305 RHPFI-----------------------------------DKDKVVPLTFEIGKDYDILL 329
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTF 415
ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+LS+F
Sbjct: 330 ITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQSLSSF 389
Query: 416 SGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYAD 475
S H+ + +IL V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TTHY+
Sbjct: 390 SAHLKNVKEILAGVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKAKSFITTHYSQ 449
Query: 476 LSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA---- 531
+ + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 450 VKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKARAYI 509
Query: 532 -------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE------IMD 577
+K++E ++ + Q+ E + L EE R L+ + +L E I
Sbjct: 510 SEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNEIIKA 568
Query: 578 LYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFENQLRD 628
Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 569 AYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM------------------ 610
Query: 629 ASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 688
+++ ++E ++ +V+ + +F V G++V VKS+ ++ A +
Sbjct: 611 -----LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQFANI 652
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPRLRKQQEDRQSGSA 744
+++ ++ VQ G +++ V I+ + K K N P
Sbjct: 653 LKINTSKESASVQAGILKLEVPFEEIKIVEEKKEKVYNVNTHKKTP-------------- 698
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
++ +DLRG V+E ++L+ L A + ++VIHG GTG +
Sbjct: 699 ---------------VRSEIDLRGKMVDEGIYELETYLDRATLNGYTEVYVIHGKGTGAL 743
Query: 803 KERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+E +L+ L+ V +Y GCTV +K
Sbjct: 744 REGILKYLKTSKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|358466142|ref|ZP_09175997.1| MutS2 family protein [Fusobacterium sp. oral taxon 370 str. F0437]
gi|357069345|gb|EHI79268.1| MutS2 family protein [Fusobacterium sp. oral taxon 370 str. F0437]
Length = 778
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 222/825 (26%), Positives = 388/825 (47%), Gaps = 147/825 (17%)
Query: 44 IEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLEL 102
+ +I G+++ + G L E+ + LR V +L D L +Y L +
Sbjct: 68 LRNINGLMDKIKLIGTYLEVEELWDINVNLRTVRVFKARL--------DELGKYKQLRDT 119
Query: 103 LKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ 162
+ N L +E+ I I+ + I D AS DL IR +K N+ +++ +
Sbjct: 120 IGNIPNLRMIEDVINKTINPEKEI-KDDASLDLRDIRLHKKTLNMNIKRKFEELFDEPSL 178
Query: 163 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
A + +IT+R RM +K K L+ GI + SSSG T F+EP V NN L
Sbjct: 179 ANAFQERIITERDGRMVTPVKFDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMREL 237
Query: 223 SNSEIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 281
E E IL L AE+ ++ R+ I + D+ + +D+ A++ +A +D C I +
Sbjct: 238 ETKEKEEIRKIL-LRIAELLRNNRDDILAIGDKAMYLDILNAKSIYA--VDNKCEIPT-- 292
Query: 282 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
VS +++E +HP + D V
Sbjct: 293 --VSNREVLSLEKARHPFI-----------------------------------DKDKVV 315
Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
P+ ++ + +++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + AD
Sbjct: 316 PLTFEIGKDYDILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFAD 375
Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
IGD QS+EQ+LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG A A +++ YL
Sbjct: 376 IGDEQSIEQSLSSFSAHLKNVKEILAGVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLN 435
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
++ + +TTHY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +
Sbjct: 436 EKKAKSFITTHYSQVKAYGYNEEGVETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRM 495
Query: 522 GFDRKIIQRA-----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAA 569
G II +A +K++E ++ + Q+ E + L EE R L+ +
Sbjct: 496 GLPESIISKARAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQE 554
Query: 570 SLHAE------IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQ 614
+L E I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 555 TLIIEKQKNEIIKAAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM---- 610
Query: 615 IDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGE 674
+++ ++E ++ +V+ + +F V G+
Sbjct: 611 -------------------LSTALREEKNKTVEVVKKIKTKVNFKV------------GD 639
Query: 675 QVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRK 734
+V VKS+ ++ A ++++ ++ VQ G +++ V P ++
Sbjct: 640 RVFVKSI-NQFANILKINTSKESASVQAGILKLEV------------------PFEEIKI 680
Query: 735 QQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLF 792
+E ++ S++++ ++ +DLRG V+E ++L+ L A + ++
Sbjct: 681 VEEKKEKVYNVSTHKKTPV-------RSEIDLRGKMVDEGIYELETYLDRATLNGYTEVY 733
Query: 793 VIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
VIHG GTG ++E +L+ L+ V +Y GCTV +K
Sbjct: 734 VIHGKGTGALREGILKYLKTSKYVKEYRVGGHGEGGLGCTVVTLK 778
>gi|417885123|ref|ZP_12529282.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus oris F0423]
gi|341596419|gb|EGS39022.1| recombination and DNA strand exchange inhibitor protein
[Lactobacillus oris F0423]
Length = 790
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 226/790 (28%), Positives = 370/790 (46%), Gaps = 113/790 (14%)
Query: 80 KKLTEAAELDGDSLQRYSPLLEL-LKNCNFLTELEEKIGFCIDCKLLII---LDR----A 131
K+L A L+G L + + +L+ L NF ++ EK KL ++ +DR
Sbjct: 76 KRLKIGANLNGTELAQVTKVLQASLSVQNFFEQMREK-----KIKLRVLEQTVDRLVTIP 130
Query: 132 SEDLELIRA---------ERKRNMENLDSLLKKVAAQIFQ----------AGGIDKPLIT 172
S L+R+ E + + L+ K +I Q A + +P++T
Sbjct: 131 SVTTRLVRSVDPDGRINDEASAKLHGIRQLISKTENEIRQQMAQYTQGKSAKYLSEPIVT 190
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
R R + + A ++ G+ + S+SG T ++EP +E NN RL ++I E+
Sbjct: 191 VRNDRFVIPVLARYRNKF-GGVVHDQSASGQTLYIEPGAVMEDNN---RLRQAQIEEKQE 246
Query: 233 ILSLL---TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
+L +L +A I+ +I + +D A+A +A + P+LS+ D+
Sbjct: 247 VLRVLAELSALISPYRHDILNNEQILGHLDFINAKAIYAHELKASLPLLSA------DNQ 300
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
+N+ HPL+ D V DIK+
Sbjct: 301 VNLRKAWHPLI-----------------------------------ARDQAVANDIKLGG 325
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ + V+ITGPNTGGKT ++KTLG+ LM +AGL++PA+ + FD + ADIGD QSLE
Sbjct: 326 DYQAVIITGPNTGGKTITLKTLGIIQLMGQAGLFIPAQEGSTIGVFDNVFADIGDEQSLE 385
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
QNLSTFSGH+ + IL+ ++ SLVL+DE+G+GTDP EG ALA +IL + R L ++
Sbjct: 386 QNLSTFSGHMDNVKTILDQLTANSLVLLDELGAGTDPKEGAALAMAILDEIGQRGSLVMI 445
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHY +L + NA+ EF TL+PTYR+L G G SN L IAK +G II
Sbjct: 446 TTHYPELKVYGYDRAKTINASMEFDQATLQPTYRLLLGIPGRSNGLEIAKRLGIGPAIIS 505
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
AQ LV + + L+E+R++ ++ A L A+ E+ +
Sbjct: 506 EAQSLV-----SDDSQDLNAMIGDLVEQRKQAREESERLAKLVAQNQADQEELNQKLDRF 560
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN-QLRDASADEINSLIKESESAIAAI 648
+ + L + Q ++ AK + D ++ +++ + + N L+ +++ A+ A+
Sbjct: 561 NEQRDQLLERARLQANHQVAQAKRKADRIIHHLRQLEIQQGAGVKENQLM-DAQGALNAL 619
Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
+ + SV + G+ V VKS G ++ G+ VQ G +++
Sbjct: 620 HQDNPRLQHNSVLKRAKEKHDLHKGDAVLVKSYGQH-GELLSRRGNHKWE-VQIGILKME 677
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS--LDL 766
+ + ++ + +KR L K+++ R A + QT K S LDL
Sbjct: 678 IDERDLEKV--AKRD--------LPKEKQQRTGHRAVKT---------TQTRKTSARLDL 718
Query: 767 RGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESP 824
RG R EEA +L I A + + +IHG GTG +++ + L+++PRV + +P
Sbjct: 719 RGHRYEEAMGELSNFIDHALLNNLGTVTIIHGKGTGALRKGTQQYLQSNPRVKSFSYAAP 778
Query: 825 MNYGCTVAYI 834
N G A I
Sbjct: 779 -NAGGDGATI 787
>gi|400289481|ref|ZP_10791510.1| putative DNA mismatch repair protein MutS2 [Streptococcus ratti
FA-1 = DSM 20564]
gi|399922119|gb|EJN94934.1| putative DNA mismatch repair protein MutS2 [Streptococcus ratti
FA-1 = DSM 20564]
Length = 776
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 213/725 (29%), Positives = 345/725 (47%), Gaps = 110/725 (15%)
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
I D AS +L IR + ++N + + +L+++ + Q + + LI R R + +K +
Sbjct: 142 FIEDFASPELRQIRHKIQQNEQQIRQILQEMLKK--QGDLLAENLIASRNGRSVLPVKNT 199
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
+++ + G+ ++S+SG+T ++EP+ V N + E E T IL L+ +
Sbjct: 200 YRHRIA-GVVHDISTSGSTVYIEPRAVVNLNEDMTQARADERHEMTRILQALSDRLRPVV 258
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
I+ + +D A+ + + P L++ D +I + G++HPLL
Sbjct: 259 AAIRNNAWLLGHLDFVRAKYLYMREYQASVPSLTA------DKTIELLGVRHPLL----- 307
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
PV D+ + +T ++ITGPNTGGKT
Sbjct: 308 --------------------------------PHPVANDLHFDTDTTAILITGPNTGGKT 335
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
+KTLG+ LM+++GL + A + F I ADIGD QS+EQ+LSTFS H++ IVDI
Sbjct: 336 IMLKTLGITQLMAQSGLPILADQGSKTAIFKEIFADIGDEQSIEQSLSTFSSHMTHIVDI 395
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L+ ++SLVL DE+G+GTDP EG ALA SIL++LR +VTTHY +L +
Sbjct: 396 LQAADKDSLVLFDELGAGTDPQEGAALAMSILEHLRLSNIKTMVTTHYPELKAYGIESDY 455
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
ENA+ EF + TL PTY + G G SNA IA+ +G I+ A+ L + + +
Sbjct: 456 VENASMEFDMVTLSPTYHFMQGVPGRSNAFEIARRLGLSEIIVSEAENLTD---TDSDVN 512
Query: 546 RKSELYQS-LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
R E +S +E RR+L D RE+E E +R L + +
Sbjct: 513 RIIERLESQTIESRRRL---------------DNIREVEQENLKFNRAVKKLYNEFSHAR 557
Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAHR------P 654
+EL+ A+ + +V D + E +S++K +S+ ++EA P
Sbjct: 558 DKELDKARAKAQEIV--------DKALAESDSILKSLKAKSQLKPHEVIEAKSQLKVLAP 609
Query: 655 DDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
+ D S V + + G+ + V G + V ++ D Q G +++ +++
Sbjct: 610 EADLSKNRVLKKAKKKRAARVGDDIIVSGYGQRGTLVSQLK--DGRWEAQVGLIKMTLQE 667
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
N I K+ +A NP P+ + Q R S PR + LDLRG R
Sbjct: 668 NEFDLI---KKDSAKNP-PKKQVQVVKRSSQKV----------PRAR-----LDLRGKRY 708
Query: 772 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGC 829
EEA +LD I A + + + +IHG+GTGV++E V + LR + V ++ +P N G
Sbjct: 709 EEAMQELDEFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKNVKEFGY-APQNAGG 767
Query: 830 TVAYI 834
+ A I
Sbjct: 768 SGATI 772
>gi|291458229|ref|ZP_06597619.1| MutS2 protein [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418762|gb|EFE92481.1| MutS2 protein [Oribacterium sp. oral taxon 078 str. F0262]
Length = 826
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 209/684 (30%), Positives = 315/684 (46%), Gaps = 92/684 (13%)
Query: 170 LITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE 229
+IT R R C+ +KA +K P G+ + SS+GAT F+EP+ V NN L E E
Sbjct: 216 VITMRDGRYCLPVKAEYKSSFP-GMIHDQSSTGATLFIEPQSIVRRNNEIRELRAEEKRE 274
Query: 230 ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS 289
+L L+A ++ + + + +D FA+A + M V P S + +S +
Sbjct: 275 IEKLLERLSASLSPHTEGLSENIRLLSHLDFVFAKAKLSLGMKAVRPRFSEKRALSLREA 334
Query: 290 INIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVEC 349
+HPL+ G D VPI I++
Sbjct: 335 ------RHPLIPG-----------------------------------DRVVPITIRLGS 353
Query: 350 ETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLE 409
+ ++VITGPNTGGKT +KT GL LM +AGL++PA L F I ADIGD QS+E
Sbjct: 354 DFTMLVITGPNTGGKTVCLKTAGLLQLMGQAGLFIPAAEGSELALFREIFADIGDEQSIE 413
Query: 410 QNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV 469
Q+LSTFS H+S V IL ESL L DE+G+GTDP+EG ALA +IL L +R ++
Sbjct: 414 QSLSTFSAHMSNTVRILREADEESLCLFDELGAGTDPTEGAALAMAILHTLHERGIRSIA 473
Query: 470 TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQ 529
TTHYA++ ENA EF L +L PTYR+L G G SNA I++ +G +II+
Sbjct: 474 TTHYAEIKVYALSTPGVENAGCEFDLNSLSPTYRLLIGVPGKSNAFAISRKLGLPEEIIE 533
Query: 530 RAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL 589
A + R E + ++ SL E R E + + EI + R + +K +
Sbjct: 534 DAGR-----RLEAGDVKLEDVIASLEESRITAERERQEIERYREEIAEYKRRARESSKGV 588
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS----ADEINSLIK----ES 641
++ + + ++ L AK D++V++ + + A+++ S +K E
Sbjct: 589 EKGRDKILNRAREEAASILAEAKETADSIVKELRKREQSGGSTLEAEKLRSGLKQELREL 648
Query: 642 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
+ + A P S ++ + G+ V V L + A V +P D+ + V
Sbjct: 649 QGELGKTERARGPARPLSKNKI-------RIGDIVRVLPL-NLTARVSTLPDRDEMLFVT 700
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS- 760
G +R +V ++ + AP L Q E Q G SS G RVQ +
Sbjct: 701 AGIIRTKVALKDLELLQR---------APAL--QTESGQRGGQKSSG-----GMRVQKAL 744
Query: 761 --KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP-- 814
+ L G EA +L L AC + ++HG GTG ++ V +LR P
Sbjct: 745 RISPEIKLIGKMTAEAMPELSKYLDDACLAHLPEVRIVHGRGTGALRNMVHGMLRKDPHI 804
Query: 815 ---RVAKYEQESPMNYGCTVAYIK 835
R+ +Y + S G T+AY K
Sbjct: 805 ESFRLGEYGEGSD---GVTIAYFK 825
>gi|419768706|ref|ZP_14294822.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-250]
gi|383359532|gb|EID36955.1| recombination and DNA strand exchange inhibitor protein
[Staphylococcus aureus subsp. aureus IS-250]
Length = 694
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 206/681 (30%), Positives = 336/681 (49%), Gaps = 81/681 (11%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
LS + ++ +++ A G +L+ E+ ++R L V N +K L+ D +Y L
Sbjct: 65 LSGLAKVSPLVHRASIGGVLNVGELNRIKR-LVQVQNQFKTFYNQM-LEEDEEVKYPILH 122
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE----RKRNMENLDSLLKKV 156
+ + + LT+L ++I D L D AS L+ IR++ +R +NLD ++K
Sbjct: 123 DKMNHLPILTDLFKEINEKCDAHDL--FDHASYTLQSIRSKISRTNQRIRQNLDRIVKNQ 180
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
Q + ++T R R + +KA ++ +GI + S+SG T ++EP VE N
Sbjct: 181 GNQ----KKLSDAIVTVRNDRNVIPVKAEYRQDF-NGIVHDQSASGQTLYIEPNSVVEMN 235
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVC 275
N RL N E E IL+ LT + +E + + + V+ +ID A+A +A+ + G
Sbjct: 236 NQISRLRNDEAVERERILTELTG-LVSAESDALLVAESVMGQIDFLIAKARYARTIKGTK 294
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
P + + ++ HPLL +N+ DVE
Sbjct: 295 PTFKEERTIYLPNAF------HPLL------DKDTVVANTIEFIDDVE------------ 330
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
V+ITGPNTGGKT ++KTLGL +M+++GL +P + +L F
Sbjct: 331 -----------------TVIITGPNTGGKTVTLKTLGLIIVMAQSGLLIPTLDGSQLSIF 373
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+ + DIGD QS+EQ+LSTFS H+ IV+IL+ + SL+L DE+G+GTDPSEG ALA S
Sbjct: 374 ENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQDADQNSLILFDELGAGTDPSEGAALAMS 433
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
IL Y+R L + TTHY +L NA+ EF ++TL PTY++L G G SNA
Sbjct: 434 ILDYVRRLGSLVMATTHYPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAF 493
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHA 573
+I+K +G II +A+ ++ E +S + S + ++R +L+ R A H
Sbjct: 494 DISKKLGLSLNIINKAKTMIGTDEQEINAMIESLEHNSKRVDQQRIELDRLVREAQETHD 553
Query: 574 EIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADE 633
+ Y++ ++ K L A K K Q+V+ A + D ++++ N LRD E
Sbjct: 554 ALSKQYQQYQNYEKSLMEEA---KEKANQRVKS----ATKEADEILKELRN-LRDHKGAE 605
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF-----GEQVHVKSLGDKLATV 688
+KE E I + + DD + ++ G++V V S G K V
Sbjct: 606 ----VKEHE----LIDKKKQLDDQYEAKSIKQHVQKKKYDTIHAGDEVKVLSYGQK-GEV 656
Query: 689 VEVPGDDDTVLVQYGKMRVRV 709
+E+ G+++ V VQ G +++++
Sbjct: 657 LELVGNEEAV-VQMGIIKMKL 676
>gi|424787034|ref|ZP_18213805.1| mutS2 family protein [Streptococcus intermedius BA1]
gi|422114285|gb|EKU17992.1| mutS2 family protein [Streptococcus intermedius BA1]
Length = 777
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 243/848 (28%), Positives = 384/848 (45%), Gaps = 157/848 (18%)
Query: 23 LLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L T +Q L+ +DI G+ L+ E A++R L V ++L
Sbjct: 47 FLEMTDMQQIFVQRPHFSLAATQDITGLTKRLELEGDLNIEEFLALKRIL----TVTQEL 102
Query: 83 TEAAE-LDGDSLQRYSPLLELL---KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
T+ + L+ LQR + L E L N L + + GF AS++L I
Sbjct: 103 TDFYDKLENVDLQRLNRLFEKLLAFPNLQGLLQAINEGGFVESF--------ASDNLARI 154
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
R R ++ + ++ + I + G +D+ ++ R R + +K + + + G+
Sbjct: 155 R----RKIQENEVQVRDILQDILKTKGDMLVDQ-VVASRNGRNVLPVKNTFRNRI-SGVV 208
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL----------TAEIAKSE 245
++S+SG T ++EPK V N ++N++ E IL +L AEIA +
Sbjct: 209 HDISASGNTVYIEPKAVVNLNG---EITNAQADERYEILRILQELSDRIRPHIAEIANNA 265
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
I +L DL A+ F Q V P+LS I + + HPL
Sbjct: 266 WIIGHL-------DLVRAKVCFMQERGAVVPMLSD------SKDIRLLHVTHPL------ 306
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+EN+ V D+ + +VITGPNTGGKT
Sbjct: 307 ----------------IENA---------------VANDLYFASDLTEIVITGPNTGGKT 335
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
+KTLGLA LM+++GL + A N R+ FD I ADIGD QS+EQ+LSTFS H++ IV I
Sbjct: 336 IMLKTLGLAQLMAQSGLPILADNGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAI 395
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
LE V +LVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L +
Sbjct: 396 LEQVDENALVLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIEMAG 455
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ----------KLV 535
+NA+ EF +LRPTYR + G G SNAL IA+ +G +++ AQ +++
Sbjct: 456 VQNASMEFDTASLRPTYRFMQGVPGRSNALEIARRLGLSELVVRHAQEQTNTDSDVNRII 515
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
ERL E + LES+ R +D RE+E E +R
Sbjct: 516 ERL------------------EEQTLESRKR---------LDNIREVEQENLKFNRALKK 548
Query: 596 LKAKETQQVQQELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAIAAI 648
L + ++ + ELN A+++ +V + L D S+ + + +I E+++ + +
Sbjct: 549 LYNEFNREKETELNKARLEAQEIVDLALSESESILKNLHDKSSLKPHEII-EAKAQLKKL 607
Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
V + + P+ G+ + V S G + V ++ D Q G +++
Sbjct: 608 APETVDLSKNKVLKQAKKNRAPKVGDDILVTSYGQRGTLVKQLK--DGRWEAQVGLIKMT 665
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
+++ + K + P+ RKQ + GPR + LDLRG
Sbjct: 666 LEEQEFNLLKAEKEQQ-----PK-RKQ--------VNVVKRTTTSGPRAR-----LDLRG 706
Query: 769 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA +LD I A + + + +IHG+GTGV++E V + LR + V + +P N
Sbjct: 707 KRYEEAMQELDAFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGY-APQN 765
Query: 827 YGCTVAYI 834
G + A I
Sbjct: 766 AGGSGATI 773
>gi|385825407|ref|YP_005861749.1| mismatch repair ATPase [Lactobacillus johnsonii DPC 6026]
gi|417837023|ref|ZP_12483263.1| recombination inhibitory protein MutS2 [Lactobacillus johnsonii
pf01]
gi|329666851|gb|AEB92799.1| mismatch repair ATPase [Lactobacillus johnsonii DPC 6026]
gi|338762702|gb|EGP13969.1| recombination inhibitory protein MutS2 [Lactobacillus johnsonii
pf01]
Length = 788
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 231/834 (27%), Positives = 385/834 (46%), Gaps = 103/834 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+ +E +K ++QT +++ + P+ ++ +D+ L L+ E+ + L
Sbjct: 39 NFDEVKKSIDQTRVLSNILRVKGPMPITDFKDVRASLKRLKVKANLNGEELGNIFLILSL 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+V + + E + D+ P+ + LKN +L +K+ I+ + D AS
Sbjct: 99 AKDVSQFTADLEEREIDT----RPIEKTLKNLAIPEDLFKKLNQAIEYDG-TVKDTASSK 153
Query: 135 LELIRAERKRNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
L +R + + N ++ + + ++ + Q + + ++T R R + +K +K G
Sbjct: 154 LMQLRHDIQSNETDIKNHMNDYISGKHTQY--LSENIVTIRDGRYVLPVKQEYKNKFG-G 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
+ + S+SG T F+EP+ + NN + L E E IL L+ ++EIK D
Sbjct: 211 VVHDQSASGQTLFVEPQAVLVLNNRQQNLMAQERQEIHRILIELSELAGMYQKEIKNNAD 270
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ ++D A++ A+ M P+L+ Q HV I + +HPL+
Sbjct: 271 ALTQLDFLSAKSKLAKAMKATEPVLN-QDHV-----IKLRKARHPLI------------- 311
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P K VP +I++ ++ITGPNTGGKT ++KTLGL
Sbjct: 312 --DPKKV--------------------VPNNIELGTSFDTMLITGPNTGGKTITLKTLGL 349
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM++AGL++ A+ +L F+ I ADIGD QS+EQ+LSTFS H+ +I+ I++ V+ +
Sbjct: 350 LQLMAQAGLFITAEEGSQLTVFNEIYADIGDEQSIEQSLSTFSSHMDQIIKIMKDVTEDD 409
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
L LIDE+G+GTDP EG +LA +IL LR +TTHY +L R NA+ EF
Sbjct: 410 LALIDELGAGTDPEEGASLAIAILDDLRGAQAKIAITTHYPELKLYGYNRARTTNASMEF 469
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
L+ L PTYR+ G G SNA IA +G + ++ +A+ L+ S++ +
Sbjct: 470 DLKKLAPTYRLRIGIPGQSNAFAIAHQLGMNEAVVDKARSLM--------NDEDSDINK- 520
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA-- 611
M ER L Q + A LH + ++ D++ L R+ + QQVQ++L A
Sbjct: 521 -MIER--LTEQTKAAEQLHETL----KQNVDQSVTLKRQLQNGLDWYNQQVQKQLEKAQE 573
Query: 612 ---------KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
+ + D ++ D E Q R N +I E++ A+ + ++ V +
Sbjct: 574 KADEMLAKKRQKADKIINDLEEQRRAGGQVRTNKVI-EAKGALNKLERENQNLAQNKVLQ 632
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
G+ V V S G + V+ D VQ G ++V+V ++ I
Sbjct: 633 REKRRHDVSVGDTVKVLSYGQQ--GVITKKLADHEFEVQIGILKVKVTDRDVEKISTQAA 690
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--I 780
A A R +S G R + + LDLRG R EEA LD I
Sbjct: 691 PKKAERAVR-------------------SSRGLRSTRASSELDLRGQRYEEALTNLDRYI 731
Query: 781 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
+ + + +IHG+GTG ++ V + L+ + V Y +P N G T A I
Sbjct: 732 DSSLLAGLNTVTIIHGIGTGAIRNGVQQYLKRNRHVKSYNY-APANQGGTGATI 784
>gi|409911112|ref|YP_006889577.1| DNA mismatch repair ATPase MutS-2 [Geobacter sulfurreducens KN400]
gi|298504677|gb|ADI83400.1| DNA mismatch repair ATPase MutS-2 [Geobacter sulfurreducens KN400]
Length = 792
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 228/806 (28%), Positives = 373/806 (46%), Gaps = 86/806 (10%)
Query: 39 LDLSTIEDIAGILNSA-VSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
L L + EDIA +L + G +L P+E+ + LR + + K+ ++
Sbjct: 64 LSLRSFEDIAPLLAAVRPDGAVLDPTELVVLFPILRTMTAIAKQFAYRTDI--------- 114
Query: 98 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 156
PLL EL +L +++ ID + I LD AS L +R +++ E + L ++
Sbjct: 115 PLLRELAGTLTGFPDLLDELEVSIDSEGEI-LDSASPLLSDLRQKKRHLTERIRRRLAEI 173
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ + IT+R R + ++ K ++P G+ +VS+SG T FMEP +
Sbjct: 174 VRETGVTTFLQDDFITQRGGRWVIPVRMDSKGMVP-GVVHDVSNSGETAFMEPLEIIGLA 232
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N L E AE I+ + I + ++ ++ +D+ A FA + P
Sbjct: 233 NELENLVAEEKAEMIRIVRTICRMIRQEADGLEEQFRILVRLDVLNGIALFADSLGAETP 292
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++ I + +HPLL +L + + PL L G
Sbjct: 293 EITDARF------IRVREGRHPLL---ALMARERGAGRVVPL------------DLGLGG 331
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
++ P +V+VITGPN GGKT S+KT GL LM+ AG+ +PA + P
Sbjct: 332 AERP-----DSHVANQVMVITGPNAGGKTISLKTTGLLHLMALAGIPVPAASTSSFPLIS 386
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+L DIGD QS+EQ+LSTFS H+S I ILE R ++VL+DE+G+GT+P +G A++ ++
Sbjct: 387 DLLVDIGDEQSIEQSLSTFSAHVSNIAGILERADRRTVVLLDELGTGTEPVQGAAISCAV 446
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L L+D+ L + TTH D+ K NA+ EF +TL P YR+ G G S+AL
Sbjct: 447 LADLQDKGALVIATTHLTDIVGFVHKRDGMVNASMEFDRQTLTPLYRLTVGEPGQSHALE 506
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
IA+ G +++ A ++ R+ E + H EL L ++RR+ E AE
Sbjct: 507 IARRYGLPDRVVAVATGMLSRM--ETEFH---ELLAELKDQRRRHEEAL-------AEAE 554
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD---E 633
L R+ E++A+ R A + + + ++ L AK + +D + +A + E
Sbjct: 555 RLRRDAEEKARIARERLAEAETRRREATEKALQEAKEIVRAARRDVNAIIEEARREKSRE 614
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
I E+E+A+ A ++ P++ S+ G+ V VK++G TV V
Sbjct: 615 ARKKIDEAEAAVEAKLQEFHPEETLSLDAVRE-------GDTVFVKAIGHD-GTVTAVDR 666
Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 753
+ V+ G M + V ++ P R+ A A ++R GS A
Sbjct: 667 RTGRLRVRAGAMELEVAATDVSP-----RRGKATEA-KIR----------TGSGRRPA-- 708
Query: 754 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 811
P +T + ++L G+RV++A +L+ L A E L ++HG GTG + V E L
Sbjct: 709 -PDAETPRE-INLIGLRVDDALARLEPFLNHASLEGYGELRIVHGKGTGALMRAVREYLD 766
Query: 812 NHPRVAKYEQESPM--NYGCTVAYIK 835
HP V ++ P G TV ++
Sbjct: 767 GHPLVREFRPGEPFEGGEGATVVTLR 792
>gi|422340227|ref|ZP_16421180.1| MutS2 protein [Fusobacterium nucleatum subsp. polymorphum F0401]
gi|355369878|gb|EHG17268.1| MutS2 protein [Fusobacterium nucleatum subsp. polymorphum F0401]
Length = 778
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 223/814 (27%), Positives = 382/814 (46%), Gaps = 152/814 (18%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L E + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSRL--------DELGKYKQLRETIGNIPNLRVIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQEKIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A D C I + VS ++
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYAN--DNRCEIPT----VSNREILS 300
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+E +HP + D VP+ ++ +
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVVPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +IL V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILGAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAA---------- 569
+K++E ++ + Q+ E + L EE R +A+
Sbjct: 506 RAYISEDNKKVEKMIENIKTKSQELDEMRERFVRLQEEARLDRERAKQETLIIEKQKNEI 565
Query: 570 --SLHAEIMDLYREIEDEAKDLDRRAAH-LKAKE-TQQVQQELNFAKVQIDTVVQDFENQ 625
S + E + E+ +A L R H K KE +Q+Q+ LN
Sbjct: 566 IKSAYEEAEKMMNEMRAKASALVERIQHEEKNKEDAKQIQKNLNM--------------- 610
Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
+++ ++E ++ +V+ + DF G++V VKS+ ++
Sbjct: 611 --------LSTALREEKNKTVEVVKKIKTKVDFKA------------GDRVFVKSI-NQF 649
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
A ++++ ++ VQ G +++ V + I+ + E+++
Sbjct: 650 ANILKINTSKESASVQAGILKLEVPFDEIKIV-------------------EEKKEKVYN 690
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVK 803
+N + + ++ +DLRG V+EA ++L+ L A + ++VIHG GTG ++
Sbjct: 691 VNNHKKT------PVRSEIDLRGKMVDEAVYELETYLDRATLNGYTEVYVIHGKGTGALR 744
Query: 804 ERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
E +L+ L+ V +Y GCTV +K
Sbjct: 745 EGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|260102887|ref|ZP_05753124.1| DNA mismatch repair protein MutS [Lactobacillus helveticus DSM
20075]
gi|260083300|gb|EEW67420.1| DNA mismatch repair protein MutS [Lactobacillus helveticus DSM
20075]
Length = 785
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 214/735 (29%), Positives = 344/735 (46%), Gaps = 121/735 (16%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
+LD AS L +R + + N E++ + + + G K L +T R R + +
Sbjct: 146 VLDTASNALARLRHDMRSNEEDIKNRM-----DAYTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L++
Sbjct: 201 KQEYRGKFG-GVVHDQSASGQTLFIEPEAVLNLNNHQQNLIAQEKQEVRNILKHLSSLAR 259
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ I + + + +D A+A A+ M P L+ D S+ + +HPL+
Sbjct: 260 EEINSINNIANSLTRLDFLQAKAKLAKEMKASEPKLTQ------DHSLELRNARHPLI-- 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
+P K VP DI++ + ++ITGPNTG
Sbjct: 312 -------------DPEKV--------------------VPNDIRLGGDYDTMLITGPNTG 338
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+ I
Sbjct: 339 GKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKEVYADIGDEQSIEQSLSTFSSHINDI 398
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
+ I++ V +E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 399 IAIMKNVDKETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGYN 458
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 459 RPRTINASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------- 511
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
S++ + + KL +Q + A + + D ++ L+++ Q
Sbjct: 512 -SDEDSDINKMIA----KLNAQTKAATTARNRLETSL----DRSQKLEQKLQQALDWYNQ 562
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESESAIAAIVEAHRP 654
+VQ++L+FA+ + + VV R AD+I N +KE++ I+EA
Sbjct: 563 RVQKQLDFAQERANEVVAK-----RRKKADKIIAELEKQKNVGVKENK-----IIEAKGE 612
Query: 655 DDDF----------SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
+ V + G+QV V S G + T+ + + + VQ G
Sbjct: 613 LNSLERQVHNLAHNKVLQREKRRHHVSVGDQVKVLSYG-QTGTITKKLSEHE-YEVQMGI 670
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
++V+V +I I KN A P +L + A+ R + + L
Sbjct: 671 IKVKVSDRDIERIA----KNNAQPKKKLVR----------------ATSAIRRSNAHSEL 710
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYE 820
DLRG R +EA LD I A ++ +IHG+GTG +++ V + LR NH + Y
Sbjct: 711 DLRGQRYDEAMTNLDRYIDSALLAGLDIVTIIHGIGTGAIRKGVWQYLRSSNHVKGFNYA 770
Query: 821 QESPMNYGCTVAYIK 835
+ G T+ +K
Sbjct: 771 PANEGGNGATIVKLK 785
>gi|418007380|ref|ZP_12647266.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UW4]
gi|410549324|gb|EKQ23497.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
UW4]
Length = 786
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 243/852 (28%), Positives = 399/852 (46%), Gaps = 115/852 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L +R E + S+ ++ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKAKLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +P K VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPGVIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
+ H + + L ++R+ E+ Q A S+H E+ Y++ E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
D + A KA ++ A+ + D +++ + QL + + N LI +A
Sbjct: 564 DAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613
Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
A+ + H+ P + G++V V S D+ T++E D VQ G
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
++++V + + I SK+ A P ++ SG S GP +L
Sbjct: 672 LKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS-------GP-----STTL 711
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRG R ++A LD I A + +IHG+GTG ++ V + L+ + +V Y
Sbjct: 712 DLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYG-F 770
Query: 823 SPMNYGCTVAYI 834
+P N G + A I
Sbjct: 771 APQNAGGSGATI 782
>gi|336400040|ref|ZP_08580828.1| MutS2 protein [Fusobacterium sp. 21_1A]
gi|336163237|gb|EGN66169.1| MutS2 protein [Fusobacterium sp. 21_1A]
Length = 778
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 224/819 (27%), Positives = 381/819 (46%), Gaps = 162/819 (19%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V KL D L +Y L E + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSKL--------DELGKYKQLRETIGNIPNLRLIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A P +S++ +S
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENKCEIPTVSNREILS------ 300
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+E +HP + D VP+ ++ +
Sbjct: 301 LEKARHPFI-----------------------------------DKDKVVPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G +I +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESVISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R L+ + +L E
Sbjct: 506 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564
Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK----NAANPAPRLRKQQEDRQ 740
A ++++ ++ +VQ G +++ V N I+ + K K N P
Sbjct: 649 FANILKINTSKESAMVQAGILKLEVPFNEIKVVEEKKEKVYNMNTHKKTP---------- 698
Query: 741 SGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMG 798
++ +DLRG V+EA ++L+ L A + ++VIHG G
Sbjct: 699 -------------------VRSEIDLRGKMVDEAVYELETYLDRATLNGYTEVYVIHGKG 739
Query: 799 TGVVKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
TG ++E +L+ L+ V +Y GCTV +K
Sbjct: 740 TGALREGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|294506640|ref|YP_003570698.1| DNA mismatch repair protein MutS2 [Salinibacter ruber M8]
gi|294342968|emb|CBH23746.1| DNA mismatch repair protein MutS2 [Salinibacter ruber M8]
Length = 819
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 240/804 (29%), Positives = 367/804 (45%), Gaps = 77/804 (9%)
Query: 41 LSTIEDIAGILNSAV-SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPL 99
LS + D+ L A + P ++ A RRTL + + KK EA D Y L
Sbjct: 68 LSPMYDLRDALRRAAPEDAYVDPEDLMATRRTLVTLRRL-KKHFEARRED------YPRL 120
Query: 100 LELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQ 159
+ + L +LEE I +D I D AS +L +R + + E L + L K
Sbjct: 121 ADAVARATPLPDLEETIASILDENA-SIRDDASPELRRLRQQIRSKEEELRTTLDKALRH 179
Query: 160 IFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNME 219
+ G T R RM + ++AS K + +G + S+SG T ++EP +E NN
Sbjct: 180 AVREGHATGEQATLRGGRMVIPVRASAKGKV-EGFVHDRSASGQTVYIEPAACLELNNEV 238
Query: 220 VRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILS 279
L ++E AE IL +T + I+ + + + DL A+A FA + V P L+
Sbjct: 239 RELQSAEQAEIERILRRVTDHVRAESDAIEENLTVLAQFDLLRAKARFANRLGAVVPKLN 298
Query: 280 SQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDF 339
+ HV EG ++P+L L + + ++ E + +
Sbjct: 299 DEGHVEI-----YEG-RNPVL---QLHFEELGAGGATDRRASGEEEALPPREV------- 342
Query: 340 PVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLIL 399
VP+D+++ + R +VITGPN GGKT +MKT+GL SLM GL LP H P FD I+
Sbjct: 343 -VPLDLELGADFRTLVITGPNAGGKTVTMKTVGLFSLMLAYGLPLPVAPHSSFPLFDQIV 401
Query: 400 ADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQY 459
ADIGD QS+E +LSTFS H+S + +L V +LVLIDE G+GTDP EG ALA ++L+
Sbjct: 402 ADIGDEQSIEDDLSTFSSHVSNLRHMLSAVGESALVLIDEAGTGTDPDEGAALAQAVLER 461
Query: 460 LRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAK 519
L + + TTH+ L + EN + EF ETLRPT+R G G S A IA+
Sbjct: 462 LTEAGARTIATTHHGTLKTYAHEAEAVENGSMEFDQETLRPTHRYQEGVPGSSYAFEIAR 521
Query: 520 SIGFDRKIIQRAQKLVERLRP----------ERQQHRKSELYQSLMEERRKLESQARTAA 569
+G ++ RA+ L + R Q + ELY + + R K E++ +
Sbjct: 522 RMGLSGDLLDRARTLAGTQKTAMENLITTFERRTQELEDELYDA-RKAREKAEAEQQRYE 580
Query: 570 SLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA 629
++ E +A + R + +E+ A+ + D Q+ QL D
Sbjct: 581 EKTEKLEKERNEFRQQALEEAERIVEEANARIENTIREIKEAQAESD-ATQEAREQLEDY 639
Query: 630 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
AD L E A A D S + + G+QV V D +T V
Sbjct: 640 KAD----LQARREEAAPEQEAAPAEADGASPA---AAGGPINEGDQVVV----DDGSTAV 688
Query: 690 EVPG-DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
EV +D + G M +RV + + + + +A P E+ G+A +
Sbjct: 689 EVQEIEDGEARLLMGSMHMRVSLDRLTRVGGPE---SAEP-------DEEDTGGNAEMAA 738
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEA----SHQLDIALACWESRSVLFVIHGMGTGVVKE 804
EAS S+D+RG RV+EA H LD A+A + + ++HG GTG ++
Sbjct: 739 LEAS---------PSIDVRGERVDEARRQVQHFLDDAVAA--NLDTVEILHGKGTGALRN 787
Query: 805 RVLEILRNHPRVAKYEQESPMNYG 828
+ E+L P V + +++P+ G
Sbjct: 788 ALHEMLSGRPDVVDH-RKAPIEEG 810
>gi|161506987|ref|YP_001576941.1| DNA mismatch repair protein [Lactobacillus helveticus DPC 4571]
gi|229486375|sp|A8YTJ4.1|MUTS2_LACH4 RecName: Full=MutS2 protein
gi|160347976|gb|ABX26650.1| DNA mismatch repair protein [Lactobacillus helveticus DPC 4571]
Length = 785
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 213/738 (28%), Positives = 348/738 (47%), Gaps = 127/738 (17%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
+LD AS L +R + + N E++ + + + G K L +T R R + +
Sbjct: 146 VLDTASNALARLRHDMRSNEEDIKNRM-----DAYTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L++
Sbjct: 201 KQEYRGKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSSLAR 259
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ I + + + +D A+A A+ M P L+ D S+ + +HPL+
Sbjct: 260 EEINSINNIANSLTRLDFLQAKAKLAKEMKASEPKLTQ------DHSLELRNARHPLI-- 311
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
+P K VP DI++ + ++ITGPNTG
Sbjct: 312 -------------DPEKV--------------------VPNDIRLGGDYDTMLITGPNTG 338
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+ I
Sbjct: 339 GKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKEVYADIGDEQSIEQSLSTFSSHINDI 398
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
+ I++ V +E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 399 IAIMKNVDKETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGYN 458
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 459 RPRTINASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------- 511
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
S++ + + KL +Q + A + + D ++ L+++ Q
Sbjct: 512 -ADEDSDINKMIA----KLNAQTKAATTARNRLETSL----DRSQKLEQKLQQALDWYNQ 562
Query: 603 QVQQELNFAKVQIDTVVQDF--------------------ENQLRDASADEINSLIKESE 642
+VQ++L+FA+ + + VV EN++ +A E+NSL +++
Sbjct: 563 RVQKQLDFAQERANEVVAKRRKKADKIIAELEKQKNVGVKENKIIEAKG-ELNSLERQAH 621
Query: 643 S-AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
+ A +++ + SV G+QV V S G + T+ + + + VQ
Sbjct: 622 NLAHNKVLQREKRQHHVSV------------GDQVKVLSYG-QTGTITKKLSEHE-YEVQ 667
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G ++V+V +I I KN A P +L + A+ R +
Sbjct: 668 IGIIKVKVSDRDIERIA----KNNAQPKKKLVR----------------ATSAIRRSNAH 707
Query: 762 NSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVA 817
+ LDLRG R +EA LD I A ++ +IHG+GTG +++ V + LR NH +
Sbjct: 708 SELDLRGQRYDEAMTNLDRYIDSALLAGLDIVTIIHGIGTGAIRKGVWQYLRSSNHVKGF 767
Query: 818 KYEQESPMNYGCTVAYIK 835
Y + G T+ +K
Sbjct: 768 NYAPANEGGNGATIVKLK 785
>gi|417992328|ref|ZP_12632689.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
CRF28]
gi|410534012|gb|EKQ08677.1| MutS2 family recombination inhibitory protein [Lactobacillus casei
CRF28]
Length = 786
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 243/852 (28%), Positives = 399/852 (46%), Gaps = 115/852 (13%)
Query: 2 GHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLS 61
G +VQ Q P + Q L A A+ + + +E+I L G +L+
Sbjct: 27 GRQLVQAMQ-PLTDPVAVQQALDETADGASALRLKGGIPVPQLENIDPALKRVDIGAVLN 85
Query: 62 PSEICAVRRTLRAVNNVWKKLTEAA-ELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCI 120
E+ ++ R L+ V+ + K LT+ ++D + L L ++ L +L ++ +
Sbjct: 86 GQELASISRVLQTVSAIDKFLTDLQDQID------FRQLYTLQESLTVLPQLSRRLKTAV 139
Query: 121 DCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIF------QAGGIDKPLITKR 174
D + D AS L +R E + S+ ++ ++ Q+ + P++T R
Sbjct: 140 DPDGTLT-DEASPQLHGVR-------EQIKSIEGEIRGKMTNYTRGAQSKYLSDPIVTIR 191
Query: 175 RSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAIL 234
R + +KA ++ G+ + S++G T F+EP+ V NN +E+AE IL
Sbjct: 192 DDRYVIPVKAEYRAKF-GGVVHDQSATGQTLFIEPQAIVALNNRLREAQLAEVAEINRIL 250
Query: 235 SLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEG 294
+ L+ E+A +IK + D A+A A+ P+ VS D+ + +
Sbjct: 251 AELSNELAPYTGQIKANAAVLGHFDFINAKAKLAKAEKATEPL------VSADNDVLLRD 304
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +P K VG+ DI + + + +
Sbjct: 305 ARHPLI---------------DPHK--------VVGN------------DIPLGDKYQAM 329
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KTLGL LM ++GL++PA + R+ FD + ADIGD QS+EQNLST
Sbjct: 330 VITGPNTGGKTITLKTLGLLQLMGQSGLFIPADDESRIGIFDEVFADIGDEQSIEQNLST 389
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H+ IV IL+ +S+ SLVL DE+G+GTDP EG ALA +IL + + V TTHY
Sbjct: 390 FSAHMDNIVHILKQLSQNSLVLFDELGAGTDPQEGAALAIAILDAVGEVGAYVVATTHYP 449
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+L + NA+ EF +TL+PTYR+L G G SNA +I+ +G I++RA+ +
Sbjct: 450 ELKLYGYNTAKTINASMEFDSKTLQPTYRLLVGVPGRSNAFDISARLGLPSVIVERAKSM 509
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLES-------QARTAASLHAEIMDLYREIEDEAK 587
+ H + + L ++R+ E+ Q A S+H E+ Y++ E +
Sbjct: 510 I-----SSDSHELNNMISDLEKQRKAAETAYEAARRQLADAQSVHDELAAAYKKFTTE-R 563
Query: 588 DLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDF-ENQLRDASADEINSLIKESESAIA 646
D + A KA ++ A+ + D +++ + QL + + N LI +A
Sbjct: 564 DAQLQQAKDKANSL------VDKAQTKADKIIKQLRQMQLTNPGTVKENQLI----AAKT 613
Query: 647 AIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGK 704
A+ + H+ P + G++V V S D+ T++E D VQ G
Sbjct: 614 ALKQLHQDEPLQKNRILRREREKQALHVGDEVKVASY-DQTGTLLE-QFDKKHWQVQLGI 671
Query: 705 MRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSL 764
++++V + + I SK+ A P ++ SG S GP +L
Sbjct: 672 LKMKVPTDELEKIKPSKQSAAQRPVVKV--------SGGGMS-------GP-----STTL 711
Query: 765 DLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE 822
DLRG R ++A LD I A + +IHG+GTG ++ V + L+ + +V Y
Sbjct: 712 DLRGERYDQAMADLDQYIDAALLAGYPSVTIIHGLGTGAIRNGVTQYLKRNRQVKTYG-F 770
Query: 823 SPMNYGCTVAYI 834
+P N G + A I
Sbjct: 771 APQNAGGSGATI 782
>gi|291295490|ref|YP_003506888.1| MutS2 family protein [Meiothermus ruber DSM 1279]
gi|290470449|gb|ADD27868.1| MutS2 family protein [Meiothermus ruber DSM 1279]
Length = 750
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 240/832 (28%), Positives = 390/832 (46%), Gaps = 132/832 (15%)
Query: 16 SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+LEE+Q+ + ALA P L I D+ L +A G L ++ V +L A+
Sbjct: 38 TLEEAQRQQEIVAEALAY----PYRLGGIVDLRPPLAAAREGLRLEGPQLREVAASLEAI 93
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
+ +L E G L+ + + ++ FL + E + + + D A+ L
Sbjct: 94 VALKHELLEI----GVHLKALAG--RIGEHTYFLRRIRESLDEAGNVR-----DEATPRL 142
Query: 136 ELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
IR R+R + L L+ + I + +T RR R + +KASH+ LP
Sbjct: 143 REIRRRVNPVRERIQDRLYQLMDR------HPEAIQERFVTLRRDRYVIPVKASHQNKLP 196
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
GI L+ S S T ++EP V NN L E AE +L L+A +A ++ E++
Sbjct: 197 -GIVLDQSDSKLTVYLEPASVVPLNNELASLRLEEEAEVNRVLFELSAALA-NDPELEAT 254
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
+ + E+D+A A A A+ V P L+ D ++ +HPL+
Sbjct: 255 LQALTELDMARAAASLAEDWGLVRPRLNR------DGLYRLQAARHPLI----------- 297
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
+NP+ + DI + R+++ITGPN GGKTA +KTL
Sbjct: 298 ---ANPVSN-----------------------DITLTPHNRILLITGPNMGGKTALLKTL 331
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GLA LM++ GLY+ A L + D + DIGD QSL+++LSTF+ H+ R+ ++LE +
Sbjct: 332 GLAVLMAQCGLYV-AAEQAELAFPDRLFVDIGDQQSLQESLSTFAAHVLRLKEVLEAATP 390
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
SL LIDE+GSGTDP EG ALA + ++ L + ++TTH + L +NA+
Sbjct: 391 HSLALIDELGSGTDPEEGAALAQAFVEGLLAKGVRGLITTHLSPLKAFAQDTPGVQNASM 450
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
F LE LRPTY+++ G+ G S AL+IA+ +GF R+ ++RA+ L L PE R L
Sbjct: 451 RFDLERLRPTYQLVVGAPGRSYALSIARRLGFPREQLERAEAL---LGPE--GGRLERLL 505
Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
+L ER +L +LH + +E ++L R+ A L + + +++ A
Sbjct: 506 AALEAERERL-------YTLHQKAQAQQQETARLQQELARQLAELAEHKERLIEE----A 554
Query: 612 KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVE----AHRPDDDFSVSETNTSS 667
K Q + +V++ + ++R S + A+ +++ RP+ + S+
Sbjct: 555 KAQAEQIVKEAQERIRQTRE---RSKTQGQGQALQELIQLRSRYQRPE------KAAPSN 605
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
Q G V V G + ATVVE+ G + ++Q G +R+ V
Sbjct: 606 PGLQVGAIVEVPEYGGQ-ATVVELRGQE--AVLQMGAVRLTV------------------ 644
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACW 785
P RL+ Q + SAG +A L+LRG+ VEEA +D +A A
Sbjct: 645 PVARLQPQPAHQSKPSAGRVAHKAKI-------PTELNLRGLTVEEALLAVDDYLAEAKA 697
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ + + ++HG GTG ++ + E L+ RV + P +G TV +++
Sbjct: 698 TATTPVRLLHGKGTGALRNALRESLKRDRRVESFHDAVPYEGGHGVTVVHLR 749
>gi|262039614|ref|ZP_06012908.1| MutS2 protein [Leptotrichia goodfellowii F0264]
gi|261746371|gb|EEY33916.1| MutS2 protein [Leptotrichia goodfellowii F0264]
Length = 779
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 212/805 (26%), Positives = 383/805 (47%), Gaps = 95/805 (11%)
Query: 39 LDLSTIEDIAGILNS-AVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
+L+ + DI +NS + G L+ ++ +++ L AV + K + +Y
Sbjct: 62 FELTGMSDIQRYINSIELIGSYLNAEDLADLKKNL-AVYRISKSRAKNVR------DKYK 114
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
+ L + + ++E+ IG ++ I D AS L IR +++ N+ ++
Sbjct: 115 IIWGLFSDTEEVKDIEQFIGDAVNDDGNI-KDDASIGLRDIRRQKQNINANIKEKFDELM 173
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ I + +IT+R R + +K K L+ GI + S++G+T ++EP V NN
Sbjct: 174 SGKDTQKAIQERIITQRNDRYVIAVKTDFKGLVK-GIEHDRSATGSTVYIEPLNVVSLNN 232
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
E E IL LT I + EI + + + +D A+ ++ P
Sbjct: 233 KLREYEAREREEIRKILLRLTELIRTKKEEIIRIKEILERLDFLNAKTAYSLNKKCTVPK 292
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
+ ++ ++ + +HPL+ +++
Sbjct: 293 IINKEYLKLVEA------RHPLIDENAV-------------------------------- 314
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VPI+ ++ +++ITGPNTGGKT ++K GL +LM+ +G+ +PA + F
Sbjct: 315 ---VPINFELGNNENIMLITGPNTGGKTVTLKVAGLLTLMALSGIPVPAHEKTEIGHFGN 371
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
+LADIGD QS+EQNLS+FSGH+ +I +I+E V+ +SLVL+DE+GSGTDP EG A A +I+
Sbjct: 372 VLADIGDEQSIEQNLSSFSGHVKKIKEIVEQVNSKSLVLMDELGSGTDPMEGAAFAMAII 431
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
YL + +++TTHY+++ T ++A+ EF++ETL PTY++L G G+SNAL I
Sbjct: 432 DYLNGKNIKSIITTHYSEVKAYAFNTTGIKSASMEFNVETLSPTYKLLEGIPGESNALII 491
Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 577
A G +II A+ + + ++ +S+ E+ +LE L E+ +
Sbjct: 492 AGKYGISEQIINSAKSYI-----SEDNQKVEQMLKSIKEKNDELE-------VLKFELEN 539
Query: 578 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINS- 636
RE+ED+ +++ ++ ++ + +++ A + V +N + S DEI
Sbjct: 540 TKRELEDQKNSYEQKIIQVENEKNEVIKKAYEEADNYLKEVQSKAKNLIDRISQDEIKKE 599
Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETN--TSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
K ++ ++ + E+ D +V E + Q GE+V VK+L V+ + D
Sbjct: 600 EAKNAQRSLNMLRESFIADKKQNVKERKIVARNIDIQEGEEVLVKTLNQN-GKVLRIIPD 658
Query: 695 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 754
+ V VQ G +++ V +NI I K+ N L+ Q
Sbjct: 659 TNNVQVQAGILKLVVSLDNIVKIQ-KKKTNRFKSFASLKSTQ------------------ 699
Query: 755 PRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRN 812
+ +DLRG +EA +L++ L A +++IHG GT ++++++ E L+
Sbjct: 700 -----VRGEIDLRGKNADEAIAELEVYLDRAMLTGYHEVYIIHGKGTMILRKKIQEFLKT 754
Query: 813 HPRVAKYE--QESPMNYGCTVAYIK 835
V +++ ++ GCTVA +K
Sbjct: 755 SKYVTEFKDANQNEGGIGCTVATLK 779
>gi|384438749|ref|YP_005653473.1| hypothetical protein [Thermus sp. CCB_US3_UF1]
gi|359289882|gb|AEV15399.1| hypothetical protein TCCBUS3UF1_3510 [Thermus sp. CCB_US3_UF1]
Length = 743
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 250/859 (29%), Positives = 397/859 (46%), Gaps = 161/859 (18%)
Query: 5 VVQKAQIPFGKSL---------EESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAV 55
+ ++AQ P G+ L EE++ T A QS P L ++ A+
Sbjct: 17 LAERAQTPLGRELALGLGPLSREEAETRHQLTQEA----QSYPYALPPAGELREAYRKAL 72
Query: 56 SGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEK 115
+G LS E+ LRA + + AEL L N L+ + E
Sbjct: 73 AGGRLSGPEL------LRAAQALEGAMALKAEL--------------LPLENALSRVAEG 112
Query: 116 IG----FCIDCKLLI-----ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQ 162
IG F + + + D AS L IR E R+ ++ L +L+ + + FQ
Sbjct: 113 IGDHAPFLGRVRKALDEEGAVKDEASPRLLAIRRELKPLRQEILDRLYALMDR-QREAFQ 171
Query: 163 AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRL 222
D+ + +R R CV +KA + +P GI L+ S SGAT F+EP V+ NN L
Sbjct: 172 ----DR-FVAFKRERYCVPVKAGMAHKVP-GILLDESESGATLFVEPLSVVKLNNRLQAL 225
Query: 223 SNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQS 282
E E IL L+ +A+ + ++ + +DL A+A A+ + S +
Sbjct: 226 RLQEEEEVGRILRELSERLAQDP-GVPGTLEALGLLDLVQAQAALAKDL--------SLT 276
Query: 283 HVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
F + ++G HPL+ PV
Sbjct: 277 RPRFGEAYRLQGAFHPLI-------------------------------------PHPVR 299
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
++ +TR+++I+GPN GGKTA +KTLGLA LM+++GL++ A+ L W D + ADI
Sbjct: 300 NTFTLDEKTRLILISGPNMGGKTALLKTLGLAVLMAQSGLFVGAERA-LLAWPDRVFADI 358
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD QSL++NLSTF+GH+ R+ +L + +SLVLIDE+GSGTDP EG AL+ +IL+ L +
Sbjct: 359 GDEQSLQENLSTFAGHLQRLKAMLLEATAQSLVLIDELGSGTDPEEGAALSQAILEALLE 418
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
R +VTTH + L +NA+ F LE LRPTY ++ G G S AL IA+ +
Sbjct: 419 RGVKGMVTTHLSPLKAFAQGGEGIQNASMRFDLERLRPTYELVLGVPGRSYALAIARRLS 478
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
++++RA+ L + +R +L + L ER +E + R A+ A+ L +
Sbjct: 479 LPEEVLRRAEAL-------QGGNRLEDLLERLEGERLAMEEERRRLAAELAQAEALRARL 531
Query: 583 E-DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKE 640
E EA+ + RA L+A +++E+ +Q++ ++ + + R + D + L+
Sbjct: 532 EAREARYQEERAERLRA-----LEEEVRGRLLQVEAELKALKEKARSEGKRDALRELM-- 584
Query: 641 SESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLV 700
A+ E + + +P G V V SLG K VVE+ G++ LV
Sbjct: 585 ------ALKEKY---AKKAPPPPPPPGLSP--GALVEVPSLG-KRGRVVELRGEE--ALV 630
Query: 701 QYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTS 760
Q G +++ +K ++P+P + P P L K PR +
Sbjct: 631 QVGPVKLNLKAKELKPLPGEE-----APKPLLAK--------------------PRREA- 664
Query: 761 KNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 818
+DLRG+ VEEA ++D AL A S L ++HG GTG +++ + E LR RV
Sbjct: 665 -KEVDLRGLTVEEALLEVDDALEEAKALGLSTLRLLHGKGTGALRQAIREFLRRDKRVEG 723
Query: 819 YEQESPM--NYGCTVAYIK 835
+ P +G TV ++
Sbjct: 724 FADAPPHEGGHGVTVVALR 742
>gi|227501366|ref|ZP_03931415.1| recombination and DNA strand exchange inhibitor protein MutS2
[Anaerococcus tetradius ATCC 35098]
gi|227216465|gb|EEI81875.1| recombination and DNA strand exchange inhibitor protein MutS2
[Anaerococcus tetradius ATCC 35098]
Length = 781
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 209/726 (28%), Positives = 349/726 (48%), Gaps = 110/726 (15%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS L IR +++R ++ + L A + +++ R R V +K +
Sbjct: 141 ISDNASATLRNIRRQKQRKEGDIRNKLNSYITNSKYADALQDNVVSVRDGRYVVPVKTNK 200
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT--AEIAKS 244
+ ++ GI + S+SG T F+EP VE NN +L + EI EE I +L + IA++
Sbjct: 201 RAVIG-GIVHDKSASGNTLFIEPAAIVELNN---QLRDLEIKEEDEIRKILDRLSRIAQA 256
Query: 245 EREIKYLMDRVL--EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+++ L ++ L ID A+A FA + PI+S + + + +HPLL G
Sbjct: 257 -FDVELLENQKLIARIDFLQAKARFALENEYSLPIISDEKILDLKEA------RHPLLTG 309
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
VPI++++ + R ++ITGPNTG
Sbjct: 310 RV------------------------------------VPINVRIGGDYRTLIITGPNTG 333
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT S+KT+GL S M++ GL++PA +L FD I DIGD QS+E +LSTFS ++ I
Sbjct: 334 GKTVSLKTVGLISAMAQTGLFIPAMEGSKLCIFDDIFLDIGDTQSIEMSLSTFSASLTNI 393
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V I++ +++SLVL+DEIGSGTDP EG ALA SIL +L ++ + TTHY++L +
Sbjct: 394 VKIIKEATKDSLVLLDEIGSGTDPVEGAALAISILDFLTEKNVMTFATTHYSELKYYAVE 453
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV-ERLRPE 541
NA+ EF +++L PTY++ G+ G SNA I+K +G +I+++A+ L+ E R
Sbjct: 454 TEAVMNASVEFDVDSLSPTYKLEIGTPGKSNAFEISKRLGLPLQILKKAKSLIGEDTRNI 513
Query: 542 RQQHRKSELYQSLMEER-RKLESQARTAASLHAEIM-----------DLYREIEDEAKDL 589
+ + E+ + +E++ R+++ + +S+ E+ D+ RE ED+A +
Sbjct: 514 NKILAEIEIDKKKIEDKNRQIDEYKKEISSIRNELKEKSKKLDKKEEDIIREAEDKANAI 573
Query: 590 DRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIV 649
+A + ++ ++ N ID + N+ ++ + + +K S A
Sbjct: 574 LDKANKKSQEMLKEAKKSRNANTSDIDRSLNKIRNKYKEGRIEREGAYLKTKLSKNA--- 630
Query: 650 EAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRV 709
PD + G+ V + L +K A V+ +P + + VQ G +++
Sbjct: 631 ----PD-------------KLKLGDFVLIAGLNEK-AEVIGLPDKNGNIKVQMGILKM-- 670
Query: 710 KKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGM 769
+NI+ + K N Q ++ ++ + P SLDLRG
Sbjct: 671 -DSNIKNVTKIKGDN-----------QTEKNITKVYNTKKAMHISP-------SLDLRGQ 711
Query: 770 RVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVA--KYEQESPM 825
R +EA LD L A S +IHG GTG + + V EIL R+ ++ +
Sbjct: 712 RYDEAMRNLDKYLDDAMLAGLSKAKIIHGKGTGALIKGVGEILEGDKRIQDFRFGDDKEG 771
Query: 826 NYGCTV 831
YG T+
Sbjct: 772 GYGVTI 777
>gi|157363912|ref|YP_001470679.1| MutS2 family protein [Thermotoga lettingae TMO]
gi|157314516|gb|ABV33615.1| MutS2 family protein [Thermotoga lettingae TMO]
Length = 770
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 248/850 (29%), Positives = 391/850 (46%), Gaps = 135/850 (15%)
Query: 14 GKSLEESQKL-------LNQTSAALAMMQSQ----PLDLSTIEDIAGILNSAVSGQLLSP 62
GK L ES K LN + +++S+ P +L+ I D I S Q L
Sbjct: 27 GKKLLESFKPVDNPHDELNAVDEFIKIVKSEYDILPSNLTLI-DQDDIFEKIESAQTLGS 85
Query: 63 SEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDC 122
E+ + L + V K L++ A+ D + Q L N+ T++ E+I CID
Sbjct: 86 EELLKMADLLSIIGVVKKNLSDLAD-DFRTKQLSGSL------GNY-TKMVEEIHKCIDE 137
Query: 123 KLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI-----FQAGGIDKPLITKRRSR 177
+ D ASE L+ IR E+K+ + KK+ +I + +P+ T R R
Sbjct: 138 NGWV-RDNASEKLKEIRDEQKK-------ITKKIRKEIENFVNSHRNFLQEPVATIRDGR 189
Query: 178 MCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL 237
+KAS+K + GI +VSS+ TYF+EP+ V NN L + E E IL L
Sbjct: 190 HVFPVKASYKSQIK-GIVHSVSSTAVTYFVEPEQFVPLNNNIRELRDQEQDEINKILRDL 248
Query: 238 TAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSS---INIEG 294
T + + R+IK + + ID +ARA FA L +HV + S I +
Sbjct: 249 TLRLFDNWRKIKSDLQTLAYIDSLYARAVFA---------LKYNAHVIYPSQEGVIKLIS 299
Query: 295 IKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVV 354
+HPL+ +P K V ID+++ + +
Sbjct: 300 ARHPLI---------------DPQKV--------------------VAIDVELAKDKCGL 324
Query: 355 VITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
VITGPNTGGKT ++KT+GL M AG L + +LP F I+ D+GD Q ++QNLST
Sbjct: 325 VITGPNTGGKTVTLKTVGLFCSMMMAGFPLTCDKNSKLPGFSKIVIDVGDEQDIQQNLST 384
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FS H++ I L + + +LVL+DE+GSGTDP EG ALA +I+ L+ + TTH
Sbjct: 385 FSSHMANIARALSIADQTTLVLLDELGSGTDPMEGAALALAIMDKLKQSGCKFIATTHLT 444
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+ D F +A+ EF ETL+PTYR+L G G S+A IA+ +G D I++ A++L
Sbjct: 445 PVKVYAANDDNFVSASVEFDPETLKPTYRVLMGVPGASHAFEIARKLGVDETILENARRL 504
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAA 594
+ E Y ++ + K + Q+ + + E++ ++ ++
Sbjct: 505 M------------GEDYMNIEKAIEKYQKQSIILQEKIRALEEEQEELKKIKEEYKKKYE 552
Query: 595 HLKAKETQQVQQEL----NF---AKVQIDTVVQDFENQLRDASADEINSLIKESESAIAA 647
LK +++ +EL N+ K QID + + + RD A S I E +S
Sbjct: 553 RLKKGRVEELDEELKNMYNYIKEMKKQIDEAISNVRKRDRDLEALRNASKIFERQSRTIR 612
Query: 648 IVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRV 707
+E + ++SE T+ G+ V +K+ G + VV + G + +V + +++
Sbjct: 613 KMEML---GETALSENITT------GDTVQLKN-GGAIGKVVGMRG--EKFVVDFSGIKI 660
Query: 708 RVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLR 767
+++ IP K K+++NP P + Y P SK +D+R
Sbjct: 661 EAYSSSLVKIPPEKLKDSSNPHPVF------------------SYYNP---LSKPEIDVR 699
Query: 768 GMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM 825
G+ VEEA ++ I V +VIHG GTG + + E+LR RV KY +P
Sbjct: 700 GLTVEEAEPLVEDFIDKLVLSEFKVGYVIHGKGTGRLAVGIWEVLRRDGRVKKYRFGTPS 759
Query: 826 NYGCTVAYIK 835
G V ++
Sbjct: 760 EGGTGVTVVE 769
>gi|218296241|ref|ZP_03496997.1| MutS2 family protein [Thermus aquaticus Y51MC23]
gi|218243313|gb|EED09843.1| MutS2 family protein [Thermus aquaticus Y51MC23]
Length = 752
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 232/800 (29%), Positives = 373/800 (46%), Gaps = 157/800 (19%)
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLE--------LLKNCNFLTELEEKIG----FCID 121
A+ W++ L G L R + LE LL N L+++ IG F +
Sbjct: 63 ALKAAWERAKAGGRLSGPELLRAAQALEEAMALKEELLPLQNALSQVAAGIGDHGAFLLR 122
Query: 122 CKLLI-----ILDRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLIT 172
+ + + D AS L+ IR E R+ + L +L+ + + +T
Sbjct: 123 VRKALDEEGAVRDEASPRLKQIRQELHPLRQEILNRLYALMDR------HKEAVQDRFVT 176
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
RR R C+ ++A + +P G+ L+ S SGAT F+EP V+ NN L E E
Sbjct: 177 LRRERYCIPVRAGMAHRIP-GLLLDESESGATLFIEPLSVVKLNNRLYALRLQEEEEVNR 235
Query: 233 ILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINI 292
IL L+ +A+ + ++ + +DL A+A ++ + S F +
Sbjct: 236 ILRELSQRLAEDP-GVPGTLEALALLDLVQAQAALSRDL--------GLSRPRFGEGYAL 286
Query: 293 EGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETR 352
E HPL+ NP+K+ E R
Sbjct: 287 EEAFHPLI--------------ENPVKNSFALDETH-----------------------R 309
Query: 353 VVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNL 412
+++I+GPN GGKTA +KTLGLA LM+++GL++ AK L W D + ADIGD QSL+++L
Sbjct: 310 LLLISGPNMGGKTALLKTLGLAVLMAQSGLFVAAKRAT-LAWPDRVYADIGDEQSLQESL 368
Query: 413 STFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTH 472
STF+GH+ R+ ++LE + SLVLIDE+GSGTDP EG AL+ +IL+ L R +VTTH
Sbjct: 369 STFAGHLKRLKEMLEGATERSLVLIDELGSGTDPEEGAALSKAILEALLARGVKGMVTTH 428
Query: 473 YADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA- 531
+ L NA+ F L TLRPTY ++ G G S AL IA+ + ++++RA
Sbjct: 429 LSPLKAFAQGREGIMNASMRFDLATLRPTYELVLGVPGRSYALAIARRLALPEEVLRRAE 488
Query: 532 ---------QKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
+ L+E+L ER +LMEE+R L+ A +L E++ +
Sbjct: 489 ALLPEGGRLEALLEKLEAER---------LALMEEKRHLQKALEEAEALKRELLAREKGF 539
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLR-DASADEINSLIKES 641
+E R LKA E ++V+Q L +Q++ ++ + R + D + L+
Sbjct: 540 AEE------RQRRLKALE-EEVRQRL----LQVEAEIKAIREKARTEGKRDALRELM--- 585
Query: 642 ESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQ 701
A+ E + + P G+ V V SLG K ++E+ G++ LVQ
Sbjct: 586 -----ALKERY---AKKAPPPPPPPGLAP--GQAVEVPSLG-KRGRLLEIRGEE--ALVQ 632
Query: 702 YGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSK 761
G +++ +K ++P+ ++ A A LR ++E ++
Sbjct: 633 VGPLKMSLKAAELKPL----QEEATPKALPLRPRREVKE--------------------- 667
Query: 762 NSLDLRGMRVEEASHQLDIALACWESRSV----LFVIHGMGTGVVKERVLEILRNHPRVA 817
+DLRG+ VEEA ++D AL E+R++ L ++HG GTG +++ + E+LR RV
Sbjct: 668 --VDLRGLTVEEALLEVDSALE--EARALGLPTLRLLHGKGTGALRQAIREVLRRDKRVE 723
Query: 818 KYEQESP--MNYGCTVAYIK 835
+ P +G TV +K
Sbjct: 724 AFADAPPNEGGHGVTVVVLK 743
>gi|297796263|ref|XP_002866016.1| DNA mismatch repair muts family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297311851|gb|EFH42275.1| DNA mismatch repair muts family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 796
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 238/786 (30%), Positives = 371/786 (47%), Gaps = 134/786 (17%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQ--SQPLDLSTIED--IAGILNSAVS 56
+G +K +S ES KLL++T AA+ M++ S LDLS+I + + A
Sbjct: 71 LGREATKKKLWSLDQSFSESLKLLDETDAAIKMLEHGSFCLDLSSIHISLVESGIRHAKR 130
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLK----NCNFLTEL 112
L + + LR + + L A + DGD +R+ PL EL+ N +F+ +
Sbjct: 131 RLSLRADQALEIASLLRFFDTLQFDLKAAIKQDGDWYKRFMPLSELIMHPVINRSFVKLV 190
Query: 113 EEKI---GFCIDCKLLIILDRASEDLELIRAERKRNMEN-----LDSLLK--KVAAQIFQ 162
E+ I G I D AS L R ER + +E LD++++ K +
Sbjct: 191 EQVIDPDG--------TIKDSASSALRQSR-ERVQTLERKLQQLLDAIIRSQKDDESVLV 241
Query: 163 AGGIDKPLITKRRSRMCVGIKAS-----------HKYLLPDGIALNVSSSGATYFMEPKG 211
A ID + S + + ++L + S SG EP
Sbjct: 242 AAEIDGRWCIQMSSNQLTSVNGLLLSSYASLSMIYFHILSLEGNMCFSGSGGGTVAEPIA 301
Query: 212 AVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
AV N+ +++ + + +A+ E ILS+LT +I ARA +++
Sbjct: 302 AVSMND-DLQSARASVAKAEAEILSMLTEKIN--------------------ARATYSRA 340
Query: 271 MDGVCPIL----------------SSQSHVSFDSSI-------NIEGIKHPLLLGSSLRS 307
G P + S QS++S + S+ + HPLLL +
Sbjct: 341 YGGAHPDIYLPPEDGVESLSAGENSLQSNLSSEKSLPRKEWLLYLPRCYHPLLLYQHKKG 400
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
+ K T ++ G P+P D ++ TRV+VITGPNTGGKT
Sbjct: 401 IRKTRETIKFHK--------TADTVLSGTP--PIPADFQISKGTRVLVITGPNTGGKTIC 450
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+K++GLA++M+K+GLY+ A R+PWFD I ADIGD QSL Q+LSTFSGH+ +I +IL
Sbjct: 451 LKSVGLAAMMAKSGLYVLATESARIPWFDNIYADIGDEQSLLQSLSTFSGHLKQISEILS 510
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRF 486
+ SLVL+DE+G+GT+P EG AL +IL+ + L + TTH+ +L LK ++ F
Sbjct: 511 HSTSRSLVLLDEVGAGTNPLEGAALGMAILESFAESGSLLTMATTHHGELKTLKYSNSAF 570
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ-- 544
ENA EF L+PT++ILWG G SNA+NIA+ +G II+ A++L E +
Sbjct: 571 ENACMEFDDLNLKPTFKILWGVPGRSNAINIAERLGLPCDIIESARELYGSASAEINEVI 630
Query: 545 ---HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
R + YQ L+ E R R + LH ++ + I D A KE
Sbjct: 631 LDMERYKQEYQRLLNESR---VYIRLSRELHDNLLIAQKNINDHA-----------TKER 676
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDAS--------ADEINSLI---KESESAI--AAI 648
++++QEL A + ++ Q R ++ A ++ + + K+ +S I +++
Sbjct: 677 RKMRQELTQAGSMTRSTLRRTLQQFRSSAAQSSQSKVATQLQTKVETTKDEDSGIRSSSV 736
Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
VE RP +SE P+ G V V SLG K ATV++V +LVQ G M+++
Sbjct: 737 VE-RRP-----ISEAAAQK-VPEVGSSVFVSSLGKK-ATVLKVEQSKKEILVQVGIMKMK 788
Query: 709 VKKNNI 714
VK ++
Sbjct: 789 VKLTDV 794
>gi|262281894|ref|ZP_06059663.1| DNA mismatch binding protein MutS2 [Streptococcus sp. 2_1_36FAA]
gi|262262348|gb|EEY81045.1| DNA mismatch binding protein MutS2 [Streptococcus sp. 2_1_36FAA]
Length = 777
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 216/724 (29%), Positives = 339/724 (46%), Gaps = 117/724 (16%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
ASEDL IR + + N + LL+++ + + +I R R + +K +++ +
Sbjct: 147 ASEDLGRIRRKIQENESKVRDLLQEILKN--KGDMLADQVIASRNGRNVLPVKNTYRNRI 204
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P G+ ++S+SG T ++EP+ V N E E IL L+A I EI
Sbjct: 205 P-GVVHDISASGTTIYIEPRAVVNLNEEISNYKADERYELLRILQELSAMIRPHATEIAN 263
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ +DL A+ F + V P LS +I + ++HPL
Sbjct: 264 NAWIIGHLDLVMAKLAFMRERGAVVPALSETQ------AIQLLQVRHPL----------- 306
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+EN+ V D+ + +VITGPNTGGKT +KT
Sbjct: 307 -----------IENA---------------VANDLHFGPDLTEIVITGPNTGGKTIMLKT 340
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGLA +M+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV ILE V
Sbjct: 341 LGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVD 400
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
ESLVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L + ENA+
Sbjct: 401 SESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGIEMDWVENAS 460
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ----------KLVERLRP 540
EF ++LRPTYR + G G SNA IA+ +G I+ AQ +++ERL
Sbjct: 461 MEFDTDSLRPTYRFMQGVPGRSNAFEIARRLGLSELIVSHAQEQTNTDSDVNRIIERL-- 518
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
E + LES+ R +D RE+E E +R L +
Sbjct: 519 ----------------EEQTLESRKR---------LDNIREVEQENLKFNRALKKLYNEF 553
Query: 601 TQQVQQELNFAKVQ----IDTVVQDFENQLRDASADEINSL----IKESESAIAAIVEAH 652
++ + ELN A+++ +D + + E+ L++ A +SL I E++S + +
Sbjct: 554 NREKETELNKARLEAQEIVDLALSESESILQNLHAK--SSLKPHEIIEAKSQLKKLAPET 611
Query: 653 RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKN 712
V + P+ G+ + V S G + V ++ D Q G +++ +++
Sbjct: 612 VDLSKNKVLKQAKKHRAPKVGDDILVTSYGQRGTLVKQLK--DGRWEAQVGLIKMTLEEQ 669
Query: 713 NIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVE 772
+ K + P+ ++ +++ +AG K LDLRG R E
Sbjct: 670 EFNLLKAEKEQQ-----PKRKQVNVVKRANTAG--------------PKARLDLRGKRYE 710
Query: 773 EASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCT 830
EA +LD I A + + + +IHG+GTGV++E V + LR + V + +P N G +
Sbjct: 711 EAMKELDEFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGY-APQNAGGS 769
Query: 831 VAYI 834
A I
Sbjct: 770 GATI 773
>gi|392428087|ref|YP_006469098.1| DNA mismatch repair protein [Streptococcus intermedius JTH08]
gi|419776965|ref|ZP_14302883.1| MutS2 family protein [Streptococcus intermedius SK54]
gi|383845176|gb|EID82580.1| MutS2 family protein [Streptococcus intermedius SK54]
gi|391757233|dbj|BAM22850.1| DNA mismatch repair protein [Streptococcus intermedius JTH08]
Length = 777
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 242/848 (28%), Positives = 384/848 (45%), Gaps = 157/848 (18%)
Query: 23 LLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L T +Q L+ +DI G+ L+ E A++R L V ++L
Sbjct: 47 FLEMTDMQQIFVQRPHFSLAATQDITGLTKRLELEGDLNIEEFLALKRIL----TVTQEL 102
Query: 83 TEAAE-LDGDSLQRYSPLLELL---KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
T+ + L+ LQR + L E L N L + + GF AS++L I
Sbjct: 103 TDFYDKLENVDLQRLNRLFEKLLAFPNLQGLLQAINEGGFVESF--------ASDNLARI 154
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
R R ++ + ++ + I + G +D+ ++ R R + +K + + + G+
Sbjct: 155 R----RKIQENEVQVRDILQDILKTKGDMLVDQ-VVASRNGRNVLPVKNTFRNRIS-GVV 208
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL----------TAEIAKSE 245
++S+SG T ++EP+ V N ++N++ E IL +L AEIA +
Sbjct: 209 HDISASGNTVYIEPRAVVNLNE---EITNAQADERHEILRILQELSDRIRPHIAEIANNA 265
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
I +L DL A+ F Q V P+LS I + + HPL
Sbjct: 266 WIIGHL-------DLVRAKVCFMQERGAVVPMLSD------SKDIRLLHVTHPL------ 306
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+EN+ V D+ + +VITGPNTGGKT
Sbjct: 307 ----------------IENA---------------VANDLYFASDLTEIVITGPNTGGKT 335
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
+KTLGLA LM+++GL + A N R+ FD I ADIGD QS+EQ+LSTFS H++ IV I
Sbjct: 336 IMLKTLGLAQLMAQSGLPILADNGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAI 395
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
LE V +LVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L +
Sbjct: 396 LEQVDENALVLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIEMAG 455
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ----------KLV 535
+NA+ EF +LRPTYR + G G SNAL IA+ +G +++ AQ +++
Sbjct: 456 VQNASMEFDTASLRPTYRFMQGVPGRSNALEIARRLGLSELVVRHAQEQTNTDSDVNRII 515
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
ERL E + LES+ R +D RE+E E +R
Sbjct: 516 ERL------------------EEQTLESRKR---------LDNIREVEQENLKFNRALKK 548
Query: 596 LKAKETQQVQQELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAIAAI 648
L + ++ + ELN A+++ +V + L D S+ + + +I E+++ + +
Sbjct: 549 LYNEFNREKETELNKARLEAQEIVDLALSESESILKNLHDKSSLKPHEII-EAKAQLKKL 607
Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
V + + P+ G+ + V S G + V ++ D Q G +++
Sbjct: 608 APETVDLSKNKVLKQAKKNRAPKVGDDILVTSYGQRGTLVKQLK--DGRWEAQVGLIKMT 665
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
+++ + K + P+ RKQ + GPR + LDLRG
Sbjct: 666 LEEQEFNLLKAEKEQQ-----PK-RKQ--------VNVVKRTTTSGPRAR-----LDLRG 706
Query: 769 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA +LD I A + + + +IHG+GTGV++E V + LR + V + +P N
Sbjct: 707 KRYEEAMQELDAFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGY-APQN 765
Query: 827 YGCTVAYI 834
G + A I
Sbjct: 766 AGGSGATI 773
>gi|315652943|ref|ZP_07905909.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
3986]
gi|315484801|gb|EFU75217.1| DNA mismatch repair protein MutS [Lachnoanaerobaculum saburreum DSM
3986]
Length = 785
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 232/811 (28%), Positives = 374/811 (46%), Gaps = 95/811 (11%)
Query: 19 ESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E Q+ + T+AAL ++ + L LS ++DI L G LS +E+ + L +N
Sbjct: 42 EIQRNQSHTTAALDRIRLKGNLSLSEVKDIKDSLKRLEIGSSLSQAELMKI---LSILNA 98
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K ++ D Y L E + + L++++ CI + I+ D AS +L
Sbjct: 99 SAKAISYGLHSDD---PEYDVLEEYFRGLDECGPLKKELSRCIISEE-IMADNASPELSH 154
Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
IR R + ++S + I A + +IT+R C+ IK+ +K + G+
Sbjct: 155 IR----RKINQINSKMYTELNNILNAHREYLMDSVITQRDGAYCLPIKSEYKNKVA-GVV 209
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRV 255
+ SS+G+T F+EP + NN LS E E IL L+ A ++ +
Sbjct: 210 HDRSSTGSTVFIEPLAIIRMNNELKSLSMDEKKEIEKILESLSLFAADYINILENNSKNL 269
Query: 256 LEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNS 315
+ +D +A+A ++ M+G P +S+ + INI+ +HPLL +
Sbjct: 270 IFLDFVYAKANLSKKMNGSEPKFNSKHY------INIKEGRHPLLDTKKV---------- 313
Query: 316 NPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLAS 375
VPI+I + +++ITGPNTGGKT S+KT+GL +
Sbjct: 314 -------------------------VPINISLGDTYDLLIITGPNTGGKTVSLKTVGLFT 348
Query: 376 LMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLV 435
+M ++GL++PA L FD + ADIGD QS+EQ+LSTFSGH+ IV IL SL
Sbjct: 349 IMGQSGLHIPAFEGSELSVFDDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADAGSLC 408
Query: 436 LIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSL 495
L DE+ +GTDP+EG ALA SIL +L + TTHY++L + ENA+ EF +
Sbjct: 409 LFDELCAGTDPTEGAALAISILSFLHRMKSRCIATTHYSELKVFALNEPGVENASCEFDV 468
Query: 496 ETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLM 555
TL PTYRIL G G SNA IA +G II A +E+ + + +L L
Sbjct: 469 ATLSPTYRILIGVPGKSNAFAIAGKLGLPDYIISEAGTHLEKDAKDFE-----DLLAKLE 523
Query: 556 EERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQI 615
+R+ +E + EI L R + + ++L + + + + ++ L AKV
Sbjct: 524 NDRQIIEKDKLSIQKYKREIESLKRHYDKQEENLAAKKEKILEEAKESARKILEEAKVTA 583
Query: 616 DTVVQDFENQLRDASA-----DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTP 670
D +++ N++ + +E + ++ES + VE +P +
Sbjct: 584 DDTIKNI-NKIASGAGLGFALEEQRTRLRESINKNTKSVEVKKP------TNKLKKPKEL 636
Query: 671 QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAP 730
+ G+ VHV SL V +P + VQ G +R +V ++I I +K P
Sbjct: 637 KLGDSVHVISLNLD-GIVSSLPNQSGNLFVQMGILRSQVNISDIAQIEEPDKK----PEN 691
Query: 731 RLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESR 788
+ R S GSS +++ T ++L G V+EA +LD L A
Sbjct: 692 KTR---------SRGSSMVKSA------TISTEINLIGKNVDEACSELDKYLDDALLAHL 736
Query: 789 SVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ +IHG GTG +++ + L+ + Y
Sbjct: 737 PGVRIIHGRGTGALQKGIHAYLKRQSFIKSY 767
>gi|428174541|gb|EKX43436.1| hypothetical protein GUITHDRAFT_110559 [Guillardia theta CCMP2712]
Length = 900
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 218/835 (26%), Positives = 396/835 (47%), Gaps = 101/835 (12%)
Query: 1 MGHAVVQKAQIPFGKSLEESQKLLNQTSAALAMMQSQP--LDLSTIEDIAGILNSAVSGQ 58
MG + +Q+A+ PF K +EE ++ N + M+ L LS + D+ ++ A G
Sbjct: 133 MGRSALQQAR-PF-KEVEEVERAYNAVEE-IRMLNDDGTRLPLSQVGDVRELVTRAAKGD 189
Query: 59 LLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGF 118
+L E+ +T+ A+ + L E L+++ + +
Sbjct: 190 VLELDELYLCTKTMGAMREIEDVLHGRNE--------TPTLMDIADDIH----------- 230
Query: 119 CIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ-----------AGGID 167
+D +++ L R+ +++ + + +++L + K+AA + A +
Sbjct: 231 -LDGSVVLQLKRSFDNVGQLSTKMYPQLQDLRKEIDKIAAAVTSTMDAMLKDTKIASTLQ 289
Query: 168 KPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEI 227
T R +R + + A++K + +GI VS +G+T ++EP+ ++ NN ++RL+ E+
Sbjct: 290 DSFYTIRENRFVLPVSATNKNKI-NGIVHGVSGTGSTVYIEPQEVIDLNN-KLRLAEGEL 347
Query: 228 -AEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSF 286
AEE I+ LL+ ++ R++K V ++D+A AR FA+ + V P VS
Sbjct: 348 KAEEIRIMGLLSKKVGSLARDVKLATSAVCQLDMAAAREKFAEMLKAVRP------EVSS 401
Query: 287 DSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIK 346
I+I +HP+L+ LR + PV D+
Sbjct: 402 GGEIDIRSGRHPVLV---LRGIK------------------------------PVANDMS 428
Query: 347 VECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQ 406
+ E VVI+GPN GGKT +KT+GL +L+ + G ++P + ++ F +LA IGD Q
Sbjct: 429 MNGEKPAVVISGPNAGGKTIVLKTVGLCALLVQHGCWVPCEEGSKMALFRRVLASIGDQQ 488
Query: 407 SLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGL 466
++E++LS+FS H+ + +L+ +L+L+DEI SGTDP++G ALA +IL+ L +
Sbjct: 489 TVEEDLSSFSSHLKTLNTMLQHADEGTLILLDEIASGTDPTQGAALAQAILEELLGKAPK 548
Query: 467 AVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRK 526
VVTTHY+ L L D+RF AA ++ PTYR+L G +G+S+A +IAK +G
Sbjct: 549 MVVTTHYSQLKALATVDSRFGVAAMQYV--NGAPTYRVLHGVSGESHAFSIAKKMGILEG 606
Query: 527 IIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEA 586
+I+RA+ L+ +Q + ++ ++L EER + A+ A ++ +E
Sbjct: 607 VIERAESLM------GEQAKMTKTLEALEEERTRASVAAQEAVEEREKLRRKLERLEKRE 660
Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
+++ RA L+ + ++ ++L A+ + V++ + D+ L+ + +
Sbjct: 661 EEIRSRAKELEKEGAREFLKQLKSAEQSVAEVIKQLQQNPDFKEVDKAKKLLDGLRTNLT 720
Query: 647 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
A E + + E G+ V + +G + V+ P + V+ G +
Sbjct: 721 AQEEEGAGEVPEGIKE----------GDFVMLLDVGSE-GEVISPPSSKGELQVRVGPLT 769
Query: 707 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 766
+R K + +R + ++ +P Q ++ GS +A+ V+T N+LDL
Sbjct: 770 LRTKVDRVRKVEGKTASSSPSPRASGSLTQ--KRGKKTGSKEYKAALQRAVRTPVNTLDL 827
Query: 767 RGMRVEEASHQLDIALACWES--RSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
RG R E+ +D L S + F++ G GTGVVK+ V E L A Y
Sbjct: 828 RGFRAEQVGDAIDSFLDKMTSANQPTAFILSGHGTGVVKKVVQEHLATCMYAAAY 882
>gi|385817010|ref|YP_005853400.1| DNA mismatch repair protein MutS2 [Lactobacillus amylovorus
GRL1118]
gi|327182948|gb|AEA31395.1| DNA mismatch repair protein MutS2 [Lactobacillus amylovorus
GRL1118]
Length = 785
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 344/728 (47%), Gaps = 112/728 (15%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
+LD AS L +R + N E + K + G K L +T R R + +
Sbjct: 146 VLDTASSALARLRHDIASNEEEI-----KDKMNAYTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ +A
Sbjct: 201 KQEYRTKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSG-LA 258
Query: 243 KSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
+ E + + + + +D A+A A+ M PIL+ D SIN+ +HPL+
Sbjct: 259 REEIDSLNNIATALTRLDFLQAKAKLAKNMKASEPILTK------DHSINLRNARHPLI- 311
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
+P K VP DI++ + ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGDDFDTMLITGPNT 337
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT GL LM+++GL++PA+ ++ F+ + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFEEVYADIGDEQSIEQSLSTFSSHIND 397
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV I++ V++E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IVAIMKNVNKETLVLIDEIGAGTDPEEGASLAISILDFLRQKDAKIMVTTHYPELKLYGY 457
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------ 511
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
S+ + + KL++Q + A S + D ++ L+++
Sbjct: 512 ------SDEDSDINKMISKLDAQTKAATSARNRLETSL----DRSQKLEQKLQQALDWYN 561
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADE-INSLIKESESAIA--AIVEAHRPDDDF 658
Q+VQ++L+FA+ + + ++ R AD+ I L K+ + + I+EA ++
Sbjct: 562 QRVQKQLDFAQERANEIIAK-----RRKKADQIIEQLEKQKNAGVKENKIIEAKGELNNL 616
Query: 659 SVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYGKMRVR 708
N + + Q ++ H S+GD++ + G T+ VQ G ++V+
Sbjct: 617 ERQANNLAHNKVLQREKRRHHVSVGDRVKVL--SYGQTGTITKKLSEHEYEVQMGIIKVK 674
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
+I I ++ + P +R A+ R + + LDLRG
Sbjct: 675 ASDRDIERI---EKNESTKPKHLVR-----------------ATSAVRRSNAHSELDLRG 714
Query: 769 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R +EA LD I + +IHG+GTG +++ V + LRN V + +P N
Sbjct: 715 QRYDEAMTNLDRYIDSVLLAGLGTVTIIHGIGTGAIRKGVWQYLRNSRHVKSFNY-APAN 773
Query: 827 YGCTVAYI 834
G A I
Sbjct: 774 EGGNGATI 781
>gi|418029387|ref|ZP_12667930.1| hypothetical protein LDBUL1632_00724 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354690062|gb|EHE90019.1| hypothetical protein LDBUL1632_00724 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 787
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 225/738 (30%), Positives = 344/738 (46%), Gaps = 132/738 (17%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKA 184
+LD AS DL +R R + + +K+ A G + + ++T R R + +K
Sbjct: 148 VLDTASADLARLRHGR---LATEAEIKEKMIAYTKGKNGQYLSEQIVTIRDDRYVIPVKQ 204
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
++Y G+ + S+SG T F+EP + NN RL N +AEE + + E++
Sbjct: 205 EYRYKFG-GVVHDQSASGQTLFVEPAAILPLNN---RLQNL-LAEERQEIHRVLHELSLD 259
Query: 245 ERE----IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLL 300
RE IK + + E+D A+A A+ M P LS+ D S + G +HPL+
Sbjct: 260 AREEMETIKRVAAALSELDFLQAKAKLAKQMRASQPALSA------DQSFKLLGARHPLI 313
Query: 301 LGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPN 360
+P D V DI + + ++ITGPN
Sbjct: 314 ---------------DP--------------------DKVVANDIALGQDFDTILITGPN 338
Query: 361 TGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHIS 420
TGGKT ++KT GL LM+++GL++PA + FD I ADIGD QS+EQ+LSTFS HI+
Sbjct: 339 TGGKTITLKTAGLLQLMAQSGLFIPANEGSSVAVFDQIFADIGDEQSIEQSLSTFSSHIN 398
Query: 421 RIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLK 480
IV I++ VS +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 399 DIVAIMKRVSDQSLVLIDEIGAGTDPEEGASLAISILDFFRKKGAKIIVTTHYPELKLYG 458
Query: 481 DKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRP 540
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+
Sbjct: 459 YNRERTTNASMEFDIKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVVGAEKLMSSDDS 518
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
+ H EL + + + E++ + SL D AK L+++
Sbjct: 519 DI-NHMIDELNK---QTKLATENKQKLQTSL------------DRAKQLEKKLQDALDIY 562
Query: 601 TQQVQQELNFA-----------KVQIDTVVQDFE-----------NQLRDASADEINSLI 638
Q+VQ++L+FA + + D ++ + E NQL DA E N L
Sbjct: 563 NQRVQKQLDFALDRANEIVAKKRKKADKIIAELEEARKEGMQVKTNQLMDAKG-EFNQLA 621
Query: 639 KESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTV 698
K+ E +A V + Q ++V V S G + TV + G+ D
Sbjct: 622 KQ-EVNLAK----------NKVLQKEKKRHHVQVDDKVKVLSYG-QTGTVTKQLGEHDYE 669
Query: 699 LVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQ 758
V G+++++V +I + +++ A A+ R
Sbjct: 670 -VSLGRIKLKVTDRDIDKLAAGQKQQA----------------------QRRATSASRSS 706
Query: 759 TSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
+++SLDLRG R EEA LD S + +IHG+GTG +++ V + L+ + V
Sbjct: 707 RARSSLDLRGQRYEEAMVNLDRYFDTILLSGLSTVTIIHGIGTGAIRQGVQQYLKRNKHV 766
Query: 817 AKYEQESPMNYGCTVAYI 834
Y +P N G T A I
Sbjct: 767 KTYSY-APANEGGTGATI 783
>gi|423071359|ref|ZP_17060133.1| MutS2 protein [Streptococcus intermedius F0413]
gi|355363833|gb|EHG11568.1| MutS2 protein [Streptococcus intermedius F0413]
Length = 777
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 242/848 (28%), Positives = 384/848 (45%), Gaps = 157/848 (18%)
Query: 23 LLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L T +Q L+ +DI G+ L+ E A++R L V ++L
Sbjct: 47 FLEMTDMQQIFVQRPHFSLAATQDITGLTKRLELEGDLNIEEFLALKRIL----TVTQEL 102
Query: 83 TEAAE-LDGDSLQRYSPLLELL---KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
T+ + L+ LQR + L E L N L + + GF AS++L I
Sbjct: 103 TDFYDKLENVDLQRLNRLFEKLLAFPNLQGLLQAINEGGFVESF--------ASDNLARI 154
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
R R ++ + ++ + I + G +D+ ++ R R + +K + + + G+
Sbjct: 155 R----RKIQENEVQVRDILQDILKTKGDMLVDQ-VVASRNGRNVLPVKNTFRNRI-SGVV 208
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL----------TAEIAKSE 245
++S+SG T ++EP+ V N ++N++ E IL +L AEIA +
Sbjct: 209 HDISASGNTVYIEPRAVVNLNE---EITNAQADERHEILRILQELSDRIRPHIAEIANNA 265
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
I +L DL A+ F Q V P+LS I + + HPL
Sbjct: 266 WIIGHL-------DLVRAKVCFMQERGAVVPMLSD------SKDIRLLHVTHPL------ 306
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+EN+ V D+ + +VITGPNTGGKT
Sbjct: 307 ----------------IENA---------------VANDLYFASDLTEIVITGPNTGGKT 335
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
+KTLGLA LM+++GL + A N R+ FD I ADIGD QS+EQ+LSTFS H++ IV I
Sbjct: 336 IMLKTLGLAQLMAQSGLPILADNGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAI 395
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
LE V +LVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L +
Sbjct: 396 LEQVDENALVLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIEMAG 455
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ----------KLV 535
+NA+ EF +LRPTYR + G G SNAL IA+ +G +++ AQ +++
Sbjct: 456 VQNASMEFDTASLRPTYRFMQGVPGRSNALEIARRLGLSELVVRHAQEQTNTDSDVNRII 515
Query: 536 ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAH 595
ERL E + LES+ R +D RE+E E +R
Sbjct: 516 ERL------------------EEQTLESRKR---------LDNIREVEQENLKFNRALKK 548
Query: 596 LKAKETQQVQQELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAIAAI 648
L + ++ + ELN A+++ +V + L D S+ + + +I E+++ + +
Sbjct: 549 LYNEFNRERETELNKARLEAQEIVDLALSESESILKNLHDKSSLKPHEII-EAKAQLKKL 607
Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
V + + P+ G+ + V S G + V ++ D Q G +++
Sbjct: 608 APETVDLSKNKVLKQAKKNRAPKVGDDILVTSYGQRGTLVKQLK--DGRWEAQVGLIKMT 665
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
+++ + K + P+ RKQ + GPR + LDLRG
Sbjct: 666 LEEQEFNLLKAEKEQQ-----PK-RKQ--------VNVVKRTTTSGPRAR-----LDLRG 706
Query: 769 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R EEA +LD I A + + + +IHG+GTGV++E V + LR + V + +P N
Sbjct: 707 KRYEEAMQELDAFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGY-APQN 765
Query: 827 YGCTVAYI 834
G + A I
Sbjct: 766 AGGSGATI 773
>gi|268318986|ref|YP_003292642.1| MutS2 protein [Lactobacillus johnsonii FI9785]
gi|262397361|emb|CAX66375.1| MutS2 protein [Lactobacillus johnsonii FI9785]
Length = 788
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 229/834 (27%), Positives = 384/834 (46%), Gaps = 103/834 (12%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ-PLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
+ +E +K ++QT +++ + P+ ++ +D+ L L+ E+ + L
Sbjct: 39 NFDEVKKSIDQTRVLSNILRVKGPMPITDFKDVRASLKRLKVKANLNGEELGNIFLILSL 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+V + + E + D+ P+ + LKN +L +K+ I+ + D AS
Sbjct: 99 AKDVSQFTADLEEREIDT----RPIEKTLKNLAISEDLFKKLNQAIEYDG-TVKDTASSK 153
Query: 135 LELIRAERKRNMENLDSLLKK-VAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDG 193
L +R + + N ++ + + ++ + Q + + ++T R R + +K +K G
Sbjct: 154 LMQLRHDIQSNETDIKNHMNDYISGKHTQY--LSENIVTIRDGRYVLPVKQEYKNKFG-G 210
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
+ + S+SG T F+EP+ + NN + L E E IL L+ ++EIK D
Sbjct: 211 VVHDQSASGQTLFVEPQAVLVLNNRQQNLMAQERQEIHRILIGLSELAGMYQKEIKNNAD 270
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
+ ++D A++ A+ M P+L+ D I + +HPL+
Sbjct: 271 ALTQLDFLSAKSKLAKAMKATEPVLN------HDHVIKLRKARHPLI------------- 311
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
+P K VP +I++ ++ITGPNTGGKT ++KTLGL
Sbjct: 312 --DPKKV--------------------VPNNIELGTSFDTMLITGPNTGGKTITLKTLGL 349
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
LM++AGL++ A+ +L F+ I ADIGD QS+EQ+LSTFS H+ +I+ I++ V+ +
Sbjct: 350 LQLMAQAGLFITAEEGSQLTVFNEIYADIGDEQSIEQSLSTFSSHMDQIIKIMKDVTEDD 409
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVLIDE+G+GTDP EG +LA +IL LR +TTHY +L R NA+ EF
Sbjct: 410 LVLIDELGAGTDPEEGASLAIAILDDLRGAQAKIAITTHYPELKLYGYNRARTTNASMEF 469
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQS 553
L+ L PTYR+ G G SNA IA +G + ++ +A+ L+ S++ +
Sbjct: 470 DLKKLAPTYRLRIGIPGQSNAFAIAHQLGMNEAVVDKARSLM--------NDEDSDINK- 520
Query: 554 LMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA-- 611
M ER L Q + A LH + ++ D++ L R+ + QQV+++L A
Sbjct: 521 -MIER--LTEQTKAAEQLHETL----KQNVDQSITLKRQLQNGLDWYNQQVRKQLEKAQE 573
Query: 612 ---------KVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
+ + D ++ D E Q R N +I E++ A+ + ++ V +
Sbjct: 574 KADEMLAKKRQKADKIINDLEEQRRAGGQVRTNKVI-EAKGALNKLERENQNLAQNKVLQ 632
Query: 663 TNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
G+ V V S G + V+ D VQ G ++V+V ++ I
Sbjct: 633 REKRRHDVSVGDTVKVLSYGQQ--GVITKKLADHEFEVQIGILKVKVTDRDVEKISTQAA 690
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--I 780
A A R +S G R + + LDLRG R EEA LD I
Sbjct: 691 PKKAERAVR-------------------SSRGLRSTRASSELDLRGQRYEEALTNLDRYI 731
Query: 781 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
+ + + +IHG+GTG ++ V + L+ + V Y +P N G T A I
Sbjct: 732 DSSLLAGLNTVTIIHGIGTGAIRNGVQQYLKQNRHVKSYSY-APANQGGTGATI 784
>gi|58336758|ref|YP_193343.1| mismatch repair protein [Lactobacillus acidophilus NCFM]
gi|227903319|ref|ZP_04021124.1| MutS family DNA mismatch repair protein [Lactobacillus acidophilus
ATCC 4796]
gi|75507643|sp|Q5FLW2.1|MUTS2_LACAC RecName: Full=MutS2 protein
gi|58254075|gb|AAV42312.1| mismatch repair protein [Lactobacillus acidophilus NCFM]
gi|227868948|gb|EEJ76369.1| MutS family DNA mismatch repair protein [Lactobacillus acidophilus
ATCC 4796]
Length = 785
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 214/736 (29%), Positives = 351/736 (47%), Gaps = 122/736 (16%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
+LD AS +L +R + N E++ + + + G K L +T R R + +
Sbjct: 145 VLDTASSELARLRHDIASNEEDIKNRMT-----TYTKGNSSKYLSEQIVTIRDDRYVIPV 199
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ IA
Sbjct: 200 KQEYRAKFG-GVVHDQSASGQTLFVEPEAVLNLNNRQQNLIAKEKQEIRNILKHLS-NIA 257
Query: 243 KSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
+ + + + + + +D A+A A+ M P L+ D S+N+ +HPL+
Sbjct: 258 REDIDSLNNIASALTSLDFLQAKAKLAKEMKASEPKLTK------DHSLNLRNARHPLI- 310
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
NP K VP +I++ + ++ITGPNT
Sbjct: 311 --------------NPEKV--------------------VPNNIRLGGDFDTMLITGPNT 336
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT GL LM+++GL++PA+ ++ F+ I ADIGD QS+EQ+LSTFS H++
Sbjct: 337 GGKTITLKTAGLLQLMAQSGLFIPAEEDSQVGVFEQIYADIGDEQSIEQSLSTFSSHMND 396
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
I+ I++ V+ E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 397 IIAIMKNVNSETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGY 456
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
R NA+ EF L+TL PTYR+ G G SNA IA+ +G +++ AQ+L+
Sbjct: 457 NRPRTTNASMEFDLKTLSPTYRLQIGIPGHSNAFAIARRLGMREDVVKNAQELMS----- 511
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
S++ + + KL +Q + A + + D ++ L+++
Sbjct: 512 ---DEDSDINKMIA----KLNAQTKAATTARNRLETSL----DRSQKLEQKLQQALDWYN 560
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESESAIAAIVEAHR 653
Q+VQ++L+FA+ + + ++ R AD+I N IKE++ I+EA
Sbjct: 561 QRVQKQLDFAQERANEIIAK-----RRKKADKIIEQLEQQKNVGIKENK-----IIEAKG 610
Query: 654 PDDDFSVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYG 703
+ N + + Q ++ H S+GD++ + G T+ VQ G
Sbjct: 611 ELNSLERQANNLAHNKVLQREKRRHHVSIGDRVKVLSY--GQTGTITKQLSEHEYEVQMG 668
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
++V+V ++ I NS ++ A P +R A+ R + +
Sbjct: 669 IIKVKVSDRDVERIDNS--QSTAKPKRLVR-----------------ATSAVRRSNAHSE 709
Query: 764 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKY 819
LDLRG R +EA LD I + +IHG+GTG +++ V + LR NH + Y
Sbjct: 710 LDLRGQRYDEAMTNLDRYIDSVLLAGLDTVTIIHGIGTGAIRKGVWQYLRSSNHVKNFNY 769
Query: 820 EQESPMNYGCTVAYIK 835
+ G T+ +K
Sbjct: 770 APANEGGNGATIVQLK 785
>gi|309790426|ref|ZP_07684988.1| MutS2 family protein [Oscillochloris trichoides DG-6]
gi|308227539|gb|EFO81205.1| MutS2 family protein [Oscillochloris trichoides DG6]
Length = 809
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 242/829 (29%), Positives = 386/829 (46%), Gaps = 124/829 (14%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L + D+ A G +L + + TL A + + +LT R P
Sbjct: 65 LTIGGARDVRRAARHADRGGVLDGQSLLEIAATLTATHTLRARLT-----------RLDP 113
Query: 99 LLE--LLKNCNFL-------TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENL 149
L L++ FL E+ IG D +LD AS +L +R E + L
Sbjct: 114 TLFPLLVEQATFLPHLPHLEAEITRAIGEDGD-----VLDSASSELAHLRREIRIAFGRL 168
Query: 150 DSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEP 209
L+ + + + +P+IT R R + +KASH+ + G+ + SSSGAT ++EP
Sbjct: 169 QEKLQNLITSSAYSSALQEPIITVRNGRYVIPVKASHRKDV-RGLVHDQSSSGATLYIEP 227
Query: 210 KGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ 269
+E NN + +E E IL+ L+ +A + ++ ++ + IDLA A A +A
Sbjct: 228 MAVLELNNRWREMQAAEAEEVQRILAALSQLVASNAPQLVIAVETLATIDLALAAARYAC 287
Query: 270 WMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTV 329
+ V P + + V D+ + + +HPLL +P TV
Sbjct: 288 ALRAVRPEIV-EIGVGADAPLFLTEARHPLL---------------DP---------RTV 322
Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
VP I + + R+++ITGPNTGGKT ++KT GL +LM++AGL +PA
Sbjct: 323 -----------VPTSIWLGGDFRLLLITGPNTGGKTVALKTTGLLALMAQAGLQVPASLP 371
Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE---------LVSRESLVLIDEI 440
R+P F I ADIGD QS+EQ+LSTFS H+S I+ +L L +LVL+DE+
Sbjct: 372 ARIPVFGHIFADIGDEQSIEQSLSTFSSHMSNIIRVLRALEEPEDWALEPPPALVLLDEL 431
Query: 441 GSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRP 500
G+GTDP EG ALA +I++ L + V TTHYA+L +NA+ EF +ETL P
Sbjct: 432 GAGTDPVEGAALARAIIERLLELQVFGVATTHYAELKAFAYNTPGVQNASVEFDIETLAP 491
Query: 501 TYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRK 560
TYR+ G G SNAL IA +G ++++RA+ + R+ + +L + ER
Sbjct: 492 TYRLSIGLPGRSNALAIASRLGLSAELVERARSTI-----TREAAQIEDLLAGIHHEREA 546
Query: 561 LESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQ 620
++ R A L A D K DR AA L+A E Q+ + E+ A +++ ++
Sbjct: 547 AAAEIRRAEELRA----------DSEKYRDRLAAELRAFEAQR-EAEIEAAHQELEDELR 595
Query: 621 DFENQLRDASADEINSL------IKESESAIA-------AIVEAHRPDDDFSVSETNTSS 667
+ QLR DE S+ ++E+E +A A++ + T
Sbjct: 596 EVRGQLRRLR-DEFRSVSLSRQWLEEAEQRMAEAGSQAKAVMAKQAKPQPAQPAPTGPRP 654
Query: 668 FTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAAN 727
P G+ V V+S+G K +V + ++ + VQ G R+ V + + ++ N
Sbjct: 655 LQP--GDTVMVRSVGLK-GEIVSIDAEEGSAAVQCGGFRMNVALREL----SREKGNPNQ 707
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACW 785
PA R + +A S N P + D+RG R + + +LD I A
Sbjct: 708 PAQRT-------YTPAARSVNL-----PPAHDVAMTFDMRGWRAHDVADKLDRYINDAYL 755
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY--GCTVA 832
+ ++HG GTG +++ V ++L+ HP +A + + + G TVA
Sbjct: 756 AGLHQVRLLHGKGTGALRQVVRDVLQGHPLIASFHSAAGRDGGDGVTVA 804
>gi|168704433|ref|ZP_02736710.1| recombination and DNA strand exchange inhibitor protein [Gemmata
obscuriglobus UQM 2246]
Length = 646
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 183/582 (31%), Positives = 289/582 (49%), Gaps = 66/582 (11%)
Query: 22 KLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKK 81
+L + AL + Q+ P + + D+ + A G +L+ ++ V L +++
Sbjct: 48 QLTTEMVEALGLNQAPPF--AGLHDVRLVARRAQIGTMLTAEQLIEVAEALNCTGAMYRY 105
Query: 82 LTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAE 141
AE S +++ L L + + IG CID + + LD AS DL +R
Sbjct: 106 RMRLAE-------HLSGIIDHLSGIEDLGTVGKSIGGCIDGRGHV-LDMASRDLAAVR-- 155
Query: 142 RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP---------D 192
+ L L +KV A+I + + P + K S + H Y+LP +
Sbjct: 156 -----QKLFDLDEKVKAEIRRL--LRDPELRKILSYPNATVHGDH-YVLPVSVNHRHKVN 207
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
G+ VS +G T F+EP + V+L E E +L L++E+ K + + Y +
Sbjct: 208 GVVHRVSGTGETVFIEPASIANLSAERVQLKADEDREVKRVLRRLSSEVGKVSKPLIYSL 267
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
+ + ++DL ARA +A+ + P ++++ + + +HPLL A
Sbjct: 268 EVIAKLDLITARARYARDFNMWPPDVNTEGKLWLRQA------RHPLL---------EAM 312
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
++P+ + SK + VPIDI++ ++VITGPNTGGKT ++KT G
Sbjct: 313 FRNDPVAEAPPPGSGSSAPSSKLKTRSVVPIDIRLGIGFNLLVITGPNTGGKTVTLKTTG 372
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L LM++ G+++PA +P F ILADIGD QSLEQ+LSTFS HI+RI I ++
Sbjct: 373 LLCLMAQCGMHIPAGEGSLVPVFRHILADIGDEQSLEQSLSTFSSHITRISSIFQVADEH 432
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SL+L+DE+G+GTDP+EG AL +IL L G A+VTTH DL + R EN A E
Sbjct: 433 SLILLDELGAGTDPTEGAALGRAILDQLDSVRGRAIVTTHLGDLKTYAFNNDRAENGAVE 492
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVER-------------LR 539
F +ET+RPTYR+ G G SNAL IA+ + + ++++A K +++ LR
Sbjct: 493 FDIETMRPTYRLHIGQFGMSNALKIARRLKLPKDLLRKAHKYLKKRKGKSGELARLQELR 552
Query: 540 PERQQ---------HRKSELYQSLMEERRKLESQARTAASLH 572
E +Q H + L ER L++QA A+L+
Sbjct: 553 LEAEQAKVDALAARHEADREKEQLARERAALDNQAAERAALN 594
>gi|399516116|ref|ZP_10757738.1| Recombination inhibitory protein MutS2 [Leuconostoc
pseudomesenteroides 4882]
gi|398649082|emb|CCJ65765.1| Recombination inhibitory protein MutS2 [Leuconostoc
pseudomesenteroides 4882]
Length = 799
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 235/823 (28%), Positives = 382/823 (46%), Gaps = 150/823 (18%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR---AVNNVWKKLTEAAELDGDSLQRYS 97
LS + DI+ L LS +EI V + LR + N + ++ + E G+SL
Sbjct: 65 LSKLADISAHLKRLTMQASLSATEISQVGQVLRNTGTIANFFVQMQD--ETIGESLH--- 119
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
L E N L ++ I ID + I D AS +L+ +R + N + + +
Sbjct: 120 VLPEQAANLATLPDVTRLIQIAID-ETGRINDEASFELKSLRGKIVGNENAVKNQM---- 174
Query: 158 AQIFQAGG----IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAV 213
Q F G + P++T R R + +KA +++ G+ + S SG T ++EP+ V
Sbjct: 175 -QAFTRGKSAQYLSDPIVTIRADRYVIPVKAEYRHQF-GGVVHDQSQSGLTLYIEPQSVV 232
Query: 214 EFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDG 273
+ NN L AEE +L L+AE+ EI+ + + D A+A A ++
Sbjct: 233 DLNNKISELRVKAHAEEQRVLQELSAELMPYVTEIQRNVSILGHFDFVNAKARLAAKLNA 292
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
+ P+++ +H+S + HPLL + ++ V +
Sbjct: 293 MQPLVNPANHISLAQAW------HPLL-----------------------DQKVAVAN-- 321
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
DI + + ++ITGPNTGGKT ++KTLGL LM+++GL++ K +
Sbjct: 322 ----------DIAIGEHYKTIIITGPNTGGKTITIKTLGLLQLMAQSGLFITTKRPSTVG 371
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
F + ADIGD QS+EQNLSTFS H++ IV +L+ + +SLV+ DE+G+GTDP+EG ALA
Sbjct: 372 IFKEVFADIGDEQSIEQNLSTFSSHMANIVSMLDKIDDKSLVIFDELGAGTDPAEGAALA 431
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
+IL + + TTHY +L +NA+ F +ETL+PTY+ L G G SN
Sbjct: 432 IAILDKVASLGAYTIATTHYPELKLYGYNRPETQNASMVFDVETLQPTYQFLMGVPGQSN 491
Query: 514 ALNIAKSIGFDRKII-----------QRAQKLVERLRPERQQHRKSELYQSLMEERRKLE 562
AL IAK +GF +I Q ++ L +R + +K + SL + + +
Sbjct: 492 ALAIAKRLGFGEDVIGAATSLTNDSDQDLNNMIADLVAQRDEVKKKNV--SLTNQLKDTK 549
Query: 563 SQARTAASLHAEIMDLYREIEDEAK---DLDRRAAHLKA---KETQQV------------ 604
SQA +L + M L + D+A+ D A H+ A K+ +Q+
Sbjct: 550 SQAE---ALRDKEMQLEK---DQARILLDAKNEANHIVAATKKKAEQLISEIRRERLNGG 603
Query: 605 ------QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
+QEL K Q+D LR + E N ++++++ A + P DD
Sbjct: 604 AKATSTEQELQQKKGQLDN--------LRQNVSLEKNKVLQKAKKA-----KQLSPGDDI 650
Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
+V +G+Q T+V+ + V+ G +++ V +++I
Sbjct: 651 TVQS---------YGQQ----------GTLVK-KHSNGQWEVEMGILKMLVDEDDIVKTE 690
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
+ + R +K + +GSA + T K++LDLRG+R E A +L
Sbjct: 691 ATIKAQKEKSKQRQQKMTRTKATGSARA------------TVKSTLDLRGIRYEAALSEL 738
Query: 779 DIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
D L A + S + +IHG GTG +++ V E LR+ RVA Y
Sbjct: 739 DKYLDTAVLANISPVEIIHGKGTGALRQGVTEFLRSDRRVASY 781
>gi|423069500|ref|ZP_17058286.1| MutS2 protein [Streptococcus intermedius F0395]
gi|355364177|gb|EHG11910.1| MutS2 protein [Streptococcus intermedius F0395]
Length = 776
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 241/835 (28%), Positives = 383/835 (45%), Gaps = 132/835 (15%)
Query: 23 LLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L T +Q L+ +DI G+ L+ E A++R L V ++L
Sbjct: 47 FLEMTDMQQIFVQRPHFSLAATQDITGLAKRLELEGDLNIEEFLALKRVL----TVTQEL 102
Query: 83 TEAA-ELDGDSLQRYSPLLELL---KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
T+ EL+ LQR + L E L N L + + GF AS++L I
Sbjct: 103 TDFYDELENVDLQRLNRLFEKLLAFPNLQGLLQAINEGGFVESF--------ASDNLARI 154
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNV 198
R + + N + +L+ + ++ + ++ R R + +K + + + G+ ++
Sbjct: 155 RRKIQENEVQVRDILQDILKT--KSDMLVDQVVASRNGRNVLPVKNTFRNRIS-GVVHDI 211
Query: 199 SSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL----------TAEIAKSEREI 248
S+SG T ++EP+ V N ++N++ E IL +L AEIA + I
Sbjct: 212 SASGNTVYIEPRAVVNLNE---EITNAQADERHEILRILQELSDRIRPHIAEIANNAWII 268
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+L DL A+ F Q V P+LS I + + HPL
Sbjct: 269 GHL-------DLVRAKVCFMQERGAVVPMLSD------SKDIRLLHVTHPL--------- 306
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
+EN+ V D+ + +VITGPNTGGKT +
Sbjct: 307 -------------IENA---------------VANDLYFASDLTEIVITGPNTGGKTIML 338
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGLA LM+++GL + A N R+ FD I ADIGD QS+EQ+LSTFS H++ IV ILE
Sbjct: 339 KTLGLAQLMAQSGLPILADNGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVTILEQ 398
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L + +N
Sbjct: 399 SDENSLVLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIEMAGVQN 458
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +LRPTYR + G G SNA IA+ +G ++++ AQ+L + + +R
Sbjct: 459 ASMEFDTASLRPTYRFMQGVPGCSNAFEIARRLGLSDRVVKDAQELTD---TDSDVNRII 515
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
E E + LES+ R +D RE+E E +R L + ++ + EL
Sbjct: 516 ERL-----EEQTLESRKR---------LDNIREVEQENLKFNRALKKLYNEFNREKETEL 561
Query: 609 NFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVS 661
N A+++ +V + L D S+ + + +I E++S + + V
Sbjct: 562 NKARLEAQEIVDLALSESESILKNLHDKSSLKPHEII-EAKSQLKKLAPETVDLSQNKVL 620
Query: 662 ETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSK 721
+ + P+ G+ + V S G + V ++ D Q G +++ +++ + + K
Sbjct: 621 KQAKKARKPKVGDDILVISYGQRGTLVNQIK--DGRWEAQVGLIKMTLEEAEFNLLKSEK 678
Query: 722 RKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD-- 779
+ P+ RKQ + GPR + LDLRG R EEA +LD
Sbjct: 679 EQ------PK-RKQ--------VNVVKRTTTSGPRAR-----LDLRGKRYEEAMQELDTF 718
Query: 780 IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
I A + + + +IHG+GTGV++E V + LR + V + +P N G + A I
Sbjct: 719 IDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGY-APQNAGGSGATI 772
>gi|404497822|ref|YP_006721928.1| DNA mismatch repair ATPase MutS-2 [Geobacter metallireducens GS-15]
gi|418066264|ref|ZP_12703630.1| MutS2 family protein [Geobacter metallireducens RCH3]
gi|78195422|gb|ABB33189.1| DNA mismatch repair ATPase MutS-2 [Geobacter metallireducens GS-15]
gi|373560939|gb|EHP87188.1| MutS2 family protein [Geobacter metallireducens RCH3]
Length = 785
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 220/810 (27%), Positives = 375/810 (46%), Gaps = 93/810 (11%)
Query: 35 QSQPLDLSTIEDIAGILNSA-VSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSL 93
Q + LST +DI+ +L++ G +L P+E+ + LR + + K+ +++
Sbjct: 60 QGIAIPLSTFDDISALLDAVRPEGAVLDPTELVILFPVLRTMTAIAKQFAYRSDI----- 114
Query: 94 QRYSPLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSL 152
PLL EL + ++ +++ ID + I LD AS L +R +++ E +
Sbjct: 115 ----PLLKELAGHVTGFPDILDELEVSIDSEGEI-LDSASPLLFDLRKKKRALTERIRRR 169
Query: 153 LKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGA 212
L ++ + + IT+R R + ++ K ++P G+ +VS+SG T FMEP
Sbjct: 170 LAEIVRETGVTTFLQDDFITQRGGRWVIPVRMDSKGMVP-GVVHDVSNSGETAFMEPLEI 228
Query: 213 VEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMD 272
+ N L E AE I+ + + + + ++ +DL A A FA +
Sbjct: 229 IGLANELENLVAEEKAEMIRIVRAICRMLRREADPLAEQFRTLVHLDLLNAVATFADSLS 288
Query: 273 GVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSL 332
P ++ + + EG +HPLL +L A + +
Sbjct: 289 AENPEINDARFIRVN-----EG-RHPLL------ALMARERGAGRV-------------- 322
Query: 333 SKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRL 392
VP+D+ + +V+VITGPN GGKT S+KT GL LM+ AGL +PA +
Sbjct: 323 --------VPLDLSLGETEQVMVITGPNAGGKTISLKTTGLLHLMALAGLPVPAASTSSF 374
Query: 393 PWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVAL 452
P +L DIGD QS+EQ+LSTFS H+S I ILE ++VL+DE+G+GT+P +G A+
Sbjct: 375 PLISDLLVDIGDEQSIEQSLSTFSAHVSNIAGILERADDRTVVLLDELGTGTEPVQGAAI 434
Query: 453 ATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDS 512
+ ++L L+++ + TTH D+ K NA+ EF TL P YR+ G G S
Sbjct: 435 SCAVLADLQEKGARVIATTHLTDIVGFVHKRDGMVNASMEFDRATLTPLYRLKKGEPGQS 494
Query: 513 NALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLH 572
+AL IA+ G ++++ A ++ R+ E EL L ++RR+ E
Sbjct: 495 HALEIARRYGLPDRVVEFATGMLSRMETEFH-----ELLAELKDQRRRHEEAL------- 542
Query: 573 AEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV---VQDFENQLRDA 629
AE L R+ E++A+ + R A +AK + V++ AK + + V + R
Sbjct: 543 AEAERLRRDAEEKARIVRERLAEAEAKRREAVEKAFQEAKEIVRSARREVNAIIEEARKE 602
Query: 630 SADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVV 689
+ E I E+E+ + ++ P++ + + G+ VHVK LG + TV+
Sbjct: 603 KSREARKKIDEAEARVEEQLQEFHPEERVPLEAISE-------GDTVHVKRLGHDV-TVL 654
Query: 690 EVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
V +T+ V+ G + V+ ++ P PR ++ +
Sbjct: 655 AVDRKGETLKVRAGTFELVVEAADVAP-------------PR------EKGGKKPKARAA 695
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVL 807
P +++ + L+L G+RV++A +L+ L A E + ++HG GTG + V
Sbjct: 696 AKIAAPSRESTPHELNLIGLRVDDALGRLEPFLNHASLEGYGEVRIVHGKGTGALMRGVR 755
Query: 808 EILRNHPRVAKYEQESPM--NYGCTVAYIK 835
E L HP V ++ P G TV ++
Sbjct: 756 EYLDGHPLVREFRPGEPFEGGEGATVVLLR 785
>gi|42518575|ref|NP_964505.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii NCC 533]
gi|81703880|sp|Q74KU8.1|MUTS2_LACJO RecName: Full=MutS2 protein
gi|41582860|gb|AAS08471.1| DNA mismatch repair protein MutS [Lactobacillus johnsonii NCC 533]
Length = 788
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 220/751 (29%), Positives = 352/751 (46%), Gaps = 98/751 (13%)
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKK-V 156
P+ + LKN +L +K+ I+ + D AS L +R + + N ++ + + +
Sbjct: 118 PIEKTLKNLAIPEDLFKKLNQAIEYDG-TVKDTASSKLMQLRHDIQSNETDIKNHMNDYI 176
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ + Q + + ++T R R + +K +K G+ + S+SG T F+EP+ + N
Sbjct: 177 SGKHTQY--LSENIVTIRDGRYVLPVKQEYKNKFG-GVVHDQSASGQTLFVEPQAVLVLN 233
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N + L E E IL L+ ++EIK D + ++D A++ A+ M P
Sbjct: 234 NRQQNLMAQERQEIHRILIELSELAGMYQKEIKNNADALTQLDFLSAKSKLAKAMKATEP 293
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
+L+ Q HV I + +HPL+ +P K
Sbjct: 294 VLN-QDHV-----IKLRKARHPLI---------------DPKKV---------------- 316
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
VP +I++ ++ITGPNTGGKT ++KTLGL LM++AGL++ A+ +L F+
Sbjct: 317 ----VPNNIELGTSFDTMLITGPNTGGKTITLKTLGLLQLMAQAGLFITAEEGSQLTVFN 372
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
I ADIGD QS+EQ+LSTFS H+ +I+ I++ V+ + LVLIDE+G+GTDP EG +LA +I
Sbjct: 373 EIYADIGDEQSIEQSLSTFSSHMDQIIKIMKDVTEDDLVLIDELGAGTDPEEGASLAIAI 432
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L LR +TTHY +L R NA+ EF L+ L PTYR+ G G SNA
Sbjct: 433 LDDLRGAQAKIAITTHYPELKLYGYNRARTTNASMEFDLKKLAPTYRLRIGIPGQSNAFA 492
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
IA +G + ++ +A+ L+ S++ + M ER L Q + A LH +
Sbjct: 493 IAHQLGMNEVVVDKARSLM--------NDEDSDINK--MIER--LTEQTKAAEQLHETL- 539
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA-----------KVQIDTVVQDFENQ 625
++ D++ L R+ + QQVQ++L A + + D ++ D E Q
Sbjct: 540 ---KQNVDQSITLKRQLQNGLDWYNQQVQKQLEKAQEKADEMLAKKRQKADKIINDLEEQ 596
Query: 626 LRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKL 685
R N +I E++ A+ + ++ V + G+ V V S G +
Sbjct: 597 RRAGGQVRTNKVI-EAKGALNKLERENQNLAQNKVLQREKRRHDVSVGDTVKVLSYGQQ- 654
Query: 686 ATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
V+ D VQ G ++V+V ++ I + A A R + D +S A
Sbjct: 655 -GVITKKLADHEFEVQIGILKVKVTDRDVEKIST---QAAPKKAERAVRSSRDLRSTRAS 710
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVK 803
S LDLRG R EEA LD I + + + +IHG+GTG ++
Sbjct: 711 S----------------ELDLRGQRYEEALTNLDRYIDSSLLAGLNTVTIIHGIGTGAIR 754
Query: 804 ERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
V + L+ + V Y +P N G T A I
Sbjct: 755 NGVQQYLKRNRHVKSYSY-APANQGGTGATI 784
>gi|39995654|ref|NP_951605.1| DNA mismatch repair ATPase MutS-2 [Geobacter sulfurreducens PCA]
gi|39982417|gb|AAR33878.1| DNA mismatch repair ATPase MutS-2 [Geobacter sulfurreducens PCA]
Length = 792
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 227/806 (28%), Positives = 369/806 (45%), Gaps = 86/806 (10%)
Query: 39 LDLSTIEDIAGILNSA-VSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
L L + EDIA +L + G +L P+E+ + LR + + K+ ++
Sbjct: 64 LSLRSFEDIAPLLAAVRPDGAVLDPTELVVLFPILRTMTAIAKQFAYRTDI--------- 114
Query: 98 PLL-ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKV 156
PLL EL +L +++ ID + I LD AS L +R +++ E + L ++
Sbjct: 115 PLLRELAGTLTGFPDLLDELEVSIDSEGEI-LDSASPLLSDLRQKKRHLTERIRRRLAEI 173
Query: 157 AAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
+ + IT+R R + ++ K ++P G+ +VS+SG T FMEP +
Sbjct: 174 VRETGVTTFLQDDFITQRGGRWVIPVRMDSKGMVP-GVVHDVSNSGETAFMEPLEIIGLA 232
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCP 276
N L E AE I+ + I + + ++ +D+ A FA + P
Sbjct: 233 NELENLVAEEKAEMIRIVRTICRMIRQEADGLDEQFRILVRLDVLNGIALFADSLGAETP 292
Query: 277 ILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGI 336
++ I + +HPLL +L + PL L G
Sbjct: 293 EITDARF------IRVREGRHPLL---ALMARERGVGRVVPL------------DLGLGG 331
Query: 337 SDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFD 396
++ P +V+VITGPN GGKT S+KT GL LM+ AG+ +PA + P
Sbjct: 332 AERP-----DSHVANQVMVITGPNAGGKTISLKTTGLLHLMALAGIPVPAASTSSFPLIS 386
Query: 397 LILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSI 456
+L DIGD QS+EQ+LSTFS H+S I ILE R ++VL+DE+G+GT+P +G A++ ++
Sbjct: 387 DLLVDIGDEQSIEQSLSTFSAHVSNIAGILERADRRTVVLLDELGTGTEPVQGAAISCAV 446
Query: 457 LQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALN 516
L L+D+ L + TTH D+ K NA+ EF +TL P YR+ G G S+AL
Sbjct: 447 LADLQDKGALVIATTHLTDIVGFVHKRDGMVNASMEFDRQTLTPLYRLTVGEPGQSHALE 506
Query: 517 IAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIM 576
IA+ G +++ A ++ R+ E EL L ++RR+ E AE
Sbjct: 507 IARRYGLPDRVVAVATGMLSRMETEFH-----ELLAELKDQRRRHEEAL-------AEAE 554
Query: 577 DLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASAD---E 633
L R+ E++A+ R A + + + ++ L AK + +D + +A + E
Sbjct: 555 RLRRDAEEKARIARERLAEAETRRREATEKALQEAKEIVRAARRDVNAIIEEARREKSRE 614
Query: 634 INSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPG 693
I E+E+A+ A ++ P++ S+ G+ V VK++G TV V
Sbjct: 615 ARKKIDEAEAAVEAKLQEFHPEETLSLDAVRE-------GDTVFVKAIGHD-GTVTAVDR 666
Query: 694 DDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASY 753
+ V+ G M + V ++ P R+ A A ++R GS A
Sbjct: 667 RTGRLRVRAGAMELEVAATDVSP-----RRGKATEA-KIR----------TGSGRRPA-- 708
Query: 754 GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR 811
P +T + ++L G+RV++A +L+ L A E L ++HG GTG + V E L
Sbjct: 709 -PDAETPRE-INLIGLRVDDALARLEPFLNHASLEGYGELRIVHGKGTGALMRAVREYLD 766
Query: 812 NHPRVAKYEQESPM--NYGCTVAYIK 835
HP V ++ P G TV ++
Sbjct: 767 GHPLVREFRPGEPFEGGEGATVVTLR 792
>gi|395242020|ref|ZP_10419020.1| MutS2 protein [Lactobacillus pasteurii CRBIP 24.76]
gi|394480768|emb|CCI85260.1| MutS2 protein [Lactobacillus pasteurii CRBIP 24.76]
Length = 786
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 232/802 (28%), Positives = 383/802 (47%), Gaps = 126/802 (15%)
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCN-FLTELEEKIGFC--------IDC 122
+V K+L A L+ + L +L L N ++ +LEEK+ +D
Sbjct: 68 FNSVEESTKRLKVKANLNAEELGNILLVLTLANEVNHYVQDLEEKMDLGPVEAILNQLDV 127
Query: 123 KLLI-------------ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGG 165
L + +LD AS +L +R + + N ++S ++ A + +A
Sbjct: 128 PLTLFNELKKAFDFDGTVLDSASSELARLRHDMRSNELEIKAKMESYVRTSAKYLSEA-- 185
Query: 166 IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNS 225
++T R R + +K ++ GI + S+SG T F+EP+ + NN + L
Sbjct: 186 ----IVTIRDDRYVIPVKQEYRGKFG-GIVHDQSASGQTLFVEPEAVLNLNNRQQNLLAQ 240
Query: 226 EIAEETAILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 284
E E IL L+A +A+ E E + + D + ++D A+A A+ M P LS
Sbjct: 241 ERQEIRRILKNLSA-LAREEIEPLNQISDSLTKLDFIQAKAKLAKQMKATEPKLSD---- 295
Query: 285 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 344
+ SI++ +HPL+ +P K V D
Sbjct: 296 --NQSISLLKARHPLI---------------DPEKV--------------------VAND 318
Query: 345 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 404
I + + ++ITGPNTGGKT ++KT GL LM+++GL++PA+ ++ F+ I ADIGD
Sbjct: 319 IYLGNDFDTMLITGPNTGGKTITLKTAGLLQLMAQSGLFIPAQEGSKVGVFNEIFADIGD 378
Query: 405 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
QS+EQ+LSTFS HI+ IV+I++ ++LVLIDEIG+GTDP EG +LA SIL YL+ R
Sbjct: 379 EQSIEQSLSTFSSHINDIVEIMKRAQGDTLVLIDEIGAGTDPEEGASLAISILDYLQSRN 438
Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
+VTTHY +L R NA+ EF L++L PTYR+ G G SNA IA+ +G
Sbjct: 439 SKIMVTTHYPELKLYGYNRPRTTNASMEFDLKSLSPTYRLQIGIPGHSNAFAIARRLGMR 498
Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQS--LMEERRKLESQARTAASLHAEI---MDLY 579
+++ A++L++ + + + +Q+ E + KLES + L ++ +D Y
Sbjct: 499 EDVVKSAEQLMDDTDSDINKMIEQLNFQTKKATEAKTKLESSLARSRQLEKKLQDALDWY 558
Query: 580 RE-IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
+ ++ + + RA + AK+ ++ Q + + Q +N++ DA E+NSL
Sbjct: 559 NQRVQKQLEFAQERANEVVAKKRKKADQIIKQLEEQQKNGALIKQNKIIDAKG-ELNSLE 617
Query: 639 KESES-AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
KE+ + A +++ + +V G+QV V S G VV +
Sbjct: 618 KEANNLANNKVLQREKRRHHVNV------------GDQVKVLSYGQ--TGVVTKKLTEHN 663
Query: 698 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 757
VQ G ++V+V +I I +S + A A ++R A+ R
Sbjct: 664 YEVQMGIVKVKVTDRDIERIDSSNQGQKA--AKKVR-----------------ATSAVRR 704
Query: 758 QTSKNSLDLRGMRVEEASHQLD-----IALACWESRSVLFVIHGMGTGVVKERVLEILRN 812
+ + LDLRG R ++A LD + LA ++ + +IHG+GTG +++ V + LR+
Sbjct: 705 SNAHSELDLRGERYDDAMTDLDRYIDSVLLAGLDT---VTIIHGIGTGAIRKGVWDYLRS 761
Query: 813 HPRVAKYEQESPMNYGCTVAYI 834
V + +P N G A I
Sbjct: 762 SRHVKAFNY-APANEGGNGATI 782
>gi|419718852|ref|ZP_14246154.1| MutS2 family protein [Lachnoanaerobaculum saburreum F0468]
gi|383304971|gb|EIC96354.1| MutS2 family protein [Lachnoanaerobaculum saburreum F0468]
Length = 785
Score = 249 bits (636), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 235/815 (28%), Positives = 376/815 (46%), Gaps = 103/815 (12%)
Query: 19 ESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNN 77
E Q+ + T+AAL ++ + L LS ++DI L G LS +E+ + L +N
Sbjct: 42 EIQRNQSHTTAALDRIRLKGNLSLSEVKDIKDSLKRLEIGSSLSQAELMKI---LSILNA 98
Query: 78 VWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K ++ D Y L E + + L++++ CI + I+ D AS +L
Sbjct: 99 SAKAISYGLHSDD---PEYDVLEEYFRGLDECGPLKKELSRCIISEE-IMADNASPELSH 154
Query: 138 IRAERKRNMEN------LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
IR RK N N L+++L + A +IT+R C+ IK+ +K +
Sbjct: 155 IR--RKINQINSKMHTELNNILNAHREYLMDA------VITQRDGAYCLPIKSEYKNKVA 206
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYL 251
G+ + SS+G+T F+EP + NN LS E E IL L+ A ++
Sbjct: 207 -GVVHDQSSTGSTVFIEPLAIIRMNNELKSLSMDEKKEIEKILESLSLLAADYINILENN 265
Query: 252 MDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAA 311
++ +D +A+A ++ M+G P +S+ + INI+ +HPLL +
Sbjct: 266 SKNLIFLDFVYAKANLSKKMNGSEPKFNSKHY------INIKEGRHPLLDTKKV------ 313
Query: 312 SSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTL 371
VPI+I + +++ITGPNTGGKT S+KT+
Sbjct: 314 -----------------------------VPINISLGDTYDLLIITGPNTGGKTVSLKTV 344
Query: 372 GLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSR 431
GL ++M ++GL++PA L FD + ADIGD QS+EQ+LSTFSGH+ IV IL
Sbjct: 345 GLFTIMGQSGLHIPAFEGSELSVFDDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADA 404
Query: 432 ESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAAT 491
SL L DE+ +GTDP+EG ALA SIL +L + TTHY++L + ENA+
Sbjct: 405 GSLCLFDELCAGTDPTEGAALAISILSFLHRMKSRCIATTHYSELKVFALNEPGVENASC 464
Query: 492 EFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELY 551
EF + TL PTYRIL G G SNA IA +G II A +E+ + + +L
Sbjct: 465 EFDVATLSPTYRILIGVPGKSNAFAIAGKLGLPDYIIFEAGTHLEKDAKDFE-----DLL 519
Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFA 611
L +R+ +E + EI L R + + ++L + + + + ++ L A
Sbjct: 520 TKLENDRQIIEKDKLSIQKYKKEIESLKRHYDKQEENLAAKKEKILEEAKESARKILEEA 579
Query: 612 KVQIDTVVQDFENQLRDASA-----DEINSLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
KV D +++ N++ + +E + ++ES + VE +P +
Sbjct: 580 KVTADDTIKNI-NKIASGAGLGSALEEQRTRLRESINKNTKSVEVKKP------TNKLKK 632
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAA 726
+ G+ VHV SL V +P + VQ G +R +V ++I I +K
Sbjct: 633 PKELKLGDSVHVISLNLD-GIVSSLPNQSGNLFVQMGILRSQVNISDIALIDEPDKK--- 688
Query: 727 NPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--AC 784
P + R S GSS +++ T ++L G V+EA +LD L A
Sbjct: 689 -PENKTR---------SRGSSMVKSA------TISTEINLIGKNVDEACSELDKYLDDAL 732
Query: 785 WESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+ +IHG GTG +++ + L+ + Y
Sbjct: 733 LAHLPGVRIIHGRGTGALQKGIHAYLKRQSFIKSY 767
>gi|227894663|ref|ZP_04012468.1| MutS family DNA mismatch repair protein [Lactobacillus ultunensis
DSM 16047]
gi|227863558|gb|EEJ70979.1| MutS family DNA mismatch repair protein [Lactobacillus ultunensis
DSM 16047]
Length = 786
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 226/783 (28%), Positives = 377/783 (48%), Gaps = 121/783 (15%)
Query: 73 RAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLT-ELEEKIGFCIDCKLLIILDRA 131
+ +NN + L + D +L P+L+ L + L EL++ + + + +LD A
Sbjct: 100 KEINNFLEDLDD----DKINLSAIEPILDQLDVPDLLYRELKKSLDYDGE-----VLDTA 150
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGIKASHK 187
S L +R + N E + + K++A + G K L +T R R + +K ++
Sbjct: 151 SNALARLRHDIASNEEEIKN---KMSA--YTKGNSSKYLSEQIVTIRDDRYVIPVKQEYR 205
Query: 188 YLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSERE 247
G+ + S+SG T F+EP+ + NN + L E E IL L++ +A+ E E
Sbjct: 206 AKF-GGVVHDQSASGQTLFVEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSS-LAREEIE 263
Query: 248 -IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
+ + + ++D A+A A+ M +S+ ++ D S+N+ +HPL+
Sbjct: 264 SLNNIATALTKLDFLQAKAKLAKEMK------ASEPQLTHDHSLNLRNARHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P K VP DI++ + ++ITGPNTGGKT
Sbjct: 312 ---------DPEKV--------------------VPNDIRLGGDFDTMLITGPNTGGKTI 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT GL LM+++GL++PA+ ++ F+ + ADIGD QS+EQ+LSTFS HI+ I+ I+
Sbjct: 343 TLKTAGLLQLMAQSGLFIPAEEGSKVGVFEEVYADIGDEQSIEQSLSTFSSHINDIIAIM 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ V++E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L R
Sbjct: 403 KNVNKETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGYNRPRT 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 463 TNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM--------SDE 514
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQ 606
S++ + M + +++A T A H E D ++ L+++ Q+VQ+
Sbjct: 515 DSDINK--MIAKLNAQTKAATTARNHLETS------LDRSEKLEQKLQQALDWYNQRVQK 566
Query: 607 ELNFAKVQIDTVVQDFENQLRDASADE-INSLIKESESAIA--AIVEA-------HRPDD 656
+L+FA+ + + ++ R AD I L K+ + I+EA R +
Sbjct: 567 QLDFAQERANEIIAK-----RRKKADRIIEQLEKQKNVGVKENKIIEAKGELNTLERQAN 621
Query: 657 DFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
+ + V + G+QV V S G + T+ + + + VQ G ++ +V +
Sbjct: 622 NLAHNKVLQREKRRHHVNVGDQVKVLSYG-QTGTITKKLSEHE-YEVQMGIIKAKVSDRD 679
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
I I S+ +++ P +R A+ R + + LDLRG R +E
Sbjct: 680 IEKI--SQNNSSSKPKRLVR-----------------ATSAVRRSNAHSELDLRGQRYDE 720
Query: 774 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTV 831
A LD I + +IHG+GTG +++ V + LRN V ++ +P N G
Sbjct: 721 AMTNLDRYIDSVLLAGLGTVTIIHGIGTGAIRKGVWQYLRNSKHVKRFNY-APANEGGNG 779
Query: 832 AYI 834
A I
Sbjct: 780 ATI 782
>gi|325956140|ref|YP_004286750.1| DNA mismatch repair protein MutS2 [Lactobacillus acidophilus 30SC]
gi|325332705|gb|ADZ06613.1| DNA mismatch repair protein MutS2 [Lactobacillus acidophilus 30SC]
Length = 785
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 343/728 (47%), Gaps = 112/728 (15%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
+LD AS L +R + N E + K + G K L +T R R + +
Sbjct: 146 VLDTASSALARLRHDIASNEEEI-----KDKMNAYTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ +A
Sbjct: 201 KQEYRTKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSG-LA 258
Query: 243 KSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
+ E + + + + +D A+A A+ M PIL+ D SIN+ +HPL+
Sbjct: 259 REEIDSLNNIATALTRLDFLQAKAKLAKNMKASEPILTK------DHSINLRNARHPLI- 311
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
+P K VP DI++ + ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGDDFDTMLITGPNT 337
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT GL LM+++GL++PA+ ++ F+ + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFEEVYADIGDEQSIEQSLSTFSSHIND 397
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV I++ V++E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IVAIMKNVNKETLVLIDEIGAGTDPEEGASLAISILDFLRQKDAKIMVTTHYPELKLYGY 457
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------ 511
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
S+ + + KL +Q + A S + D ++ L+++
Sbjct: 512 ------SDEDSDINKMISKLNAQTKAATSARNRLETSL----DRSQKLEQKLQQALDWYN 561
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADE-INSLIKESESAIA--AIVEAHRPDDDF 658
Q+VQ++L+FA+ + + ++ R AD+ I L K+ + + I+EA ++
Sbjct: 562 QRVQKQLDFAQERANEIIAK-----RRKKADQIIEQLEKQKNAGVKENKIIEAKGELNNL 616
Query: 659 SVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYGKMRVR 708
N + + Q ++ H S+GD++ + G T+ VQ G ++V+
Sbjct: 617 ERQANNLAHNKVLQREKRRHHVSVGDRVKVLSY--GQTGTITKKLSEHEYEVQMGIIKVK 674
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
+I I ++ + P +R A+ R + + LDLRG
Sbjct: 675 ASDRDIERI---EKNESTKPKHLVR-----------------ATSAVRRSNAHSELDLRG 714
Query: 769 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R +EA LD I + +IHG+GTG +++ V + LRN V + +P N
Sbjct: 715 QRYDEAMTNLDRYIDSVLLAGLGTVTIIHGIGTGAIRKGVWQYLRNSRHVKSFNY-APAN 773
Query: 827 YGCTVAYI 834
G A I
Sbjct: 774 EGGNGATI 781
>gi|326391467|ref|ZP_08213002.1| MutS2 family protein [Thermoanaerobacter ethanolicus JW 200]
gi|392940299|ref|ZP_10305943.1| LOW QUALITY PROTEIN: MutS2 family protein [Thermoanaerobacter
siderophilus SR4]
gi|325992493|gb|EGD50950.1| MutS2 family protein [Thermoanaerobacter ethanolicus JW 200]
gi|392292049|gb|EIW00493.1| LOW QUALITY PROTEIN: MutS2 family protein [Thermoanaerobacter
siderophilus SR4]
Length = 791
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 240/827 (29%), Positives = 404/827 (48%), Gaps = 102/827 (12%)
Query: 7 QKA-QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
QKA I K +EE ++ L+ + A++ + S EDI + A +L E+
Sbjct: 33 QKASDIVIKKDIEEIERELDLLNEAISFISSYGGISFAFEDIRDYIKKAQIDSVLYNQEL 92
Query: 66 CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
+++ L V+ + E D R+ L E K + LE++I I +
Sbjct: 93 LKIKKFLNLVSQIKGYFKNLQESD-----RFVRLKEYDKKVLPIKNLEKRIENIIISEDE 147
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
I D AS L+ +R ++ E + + L + + + + +P+IT R+ R V +K
Sbjct: 148 I-ADDASPMLKALRRQKLSINEKIRATLNSIIST--RQKELQEPIITVRQGRYVVPVKQE 204
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ GI + SSSGAT F+EP V+ NN ++ E E IL L+ E+ K
Sbjct: 205 YRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELKEKQEIQRILFELSQEVKKYS 263
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + ++ V ++D FA+A ++ + V P L++ + IN++ +HPL+
Sbjct: 264 QILFDDIEIVSDLDFIFAKAKYSLKLKAVRPELNTMGY------INLKKARHPLI----- 312
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
N E+ V PIDI + + +VITGPNTGGKT
Sbjct: 313 ------------------NQEVIV------------PIDIYIGDQFNTLVITGPNTGGKT 342
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +LM+ AGL +PA+ ++ F+ + DIGD QS+EQ+LSTFS H++ IV I
Sbjct: 343 VTLKTVGLLTLMAMAGLNIPAEERSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVSI 402
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L+ V++ LVL+DE+G+GTDP EG ALA SIL L + TTHY++L K
Sbjct: 403 LQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGAKTIATTHYSELKQYALKAPG 462
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 543
ENA+ EF +ETL+PTY+++ G G SNA I+K +G ++II+ A+K + E L+ E
Sbjct: 463 VENASVEFDVETLKPTYKLIIGLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE-- 520
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKE- 600
++ + +RR+LE + A L ++ L E+E E K L +R +AKE
Sbjct: 521 -----DIIADVESKRRELEKANQEIAFLKKDVEILKEELEKEKKKLQSERDKILKEAKEK 575
Query: 601 TQQVQQELNFAKVQIDTVVQDFE--NQLRDASADEINSLIKESESAIAAIV----EAHRP 654
+++ QE F +I +++ E Q +D E+ +K++ + V EAH
Sbjct: 576 ARKIIQEAKFTAEEIIKKIKEAEESTQNKDRIIQEVREELKKNLEELEEEVLKPKEAH-- 633
Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
+S N G+ V++ L D+ V+ +P V +Q G +++ V +N+
Sbjct: 634 ---YSRIPDNLKE-----GQTVYIVPL-DQNGIVLSLPDKSGNVEIQAGILKMTVHISNL 684
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
R + + G + +E++ Q+ S+D+RG +++A
Sbjct: 685 RVAEEKEDEEVK--------------KGYSKFVHEKS------QSISTSIDVRGKNLDDA 724
Query: 775 SHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+++ I A + +IHG GTGV++ + + LR++ V +
Sbjct: 725 LLEVEKYIDDAYLAGLKEVTIIHGRGTGVLRTGISQFLRSNKHVKSF 771
>gi|374307825|ref|YP_005054256.1| DNA mismatch repair protein MutS [Filifactor alocis ATCC 35896]
gi|320120381|gb|EFE28209.2| DNA mismatch repair protein MutS [Filifactor alocis ATCC 35896]
Length = 786
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 204/699 (29%), Positives = 333/699 (47%), Gaps = 82/699 (11%)
Query: 129 DRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASH 186
D AS L IR R+M ++ ++K I + G + ++T R+ R V +K +
Sbjct: 145 DSASGTLRQIR----RSMSSMKESIRKKLDSIVTSSGQYLQDGIVTMRQDRFVVPVKLEN 200
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K+ +P GI + S+SGAT F+EP VE NN L N E E IL + A
Sbjct: 201 KHKVP-GIVHDTSASGATLFVEPMVIVEMNNKLQTLKNEEHQEIQRILKEFSDRAALIAD 259
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
EI+ + E+D FA+ + M + +F I ++ +HPL+
Sbjct: 260 EIRVNETNLTELDFIFAKGKLSISMK------AEAVEYNFVMEIRLKQARHPLI------ 307
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFP--VPIDIKVECETRVVVITGPNTGGK 364
DF VP DI + + ++ITGPNTGGK
Sbjct: 308 -------------------------------DFKKVVPSDILIGKGYKTLMITGPNTGGK 336
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
T ++KT+GL +LM ++GL+LP + F+ I ADIGD QS+EQ+LSTFS H++ IV
Sbjct: 337 TVTLKTMGLFALMYQSGLHLPCDYGSSMCIFENIFADIGDEQSIEQSLSTFSSHMTHIVS 396
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
IL ++ LVL DE+G+GTDP EG ALA SIL+ ++ R + + TTHY++L +
Sbjct: 397 ILNSATKNCLVLFDELGAGTDPIEGAALAISILEEIKSRDCICIATTHYSELKHYALTED 456
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPER 542
ENA+ EF+++TL PTYR++ G G SNA I++ +G + +I+ A+ + ++L E
Sbjct: 457 GVENASMEFNIDTLSPTYRLMIGLPGKSNAFEISQRLGLQQHVIEMAKSRIHTDKLAMED 516
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
E + + ERR+ E + A L E M + D+ D R K Q
Sbjct: 517 MLKEIEEEKKKIEYERRESE-RIYAEAQLIEEKMQMKL---DKINDRKEREIQEGKKLAQ 572
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
++ ++ AK +ID +++ N + +++N ++++ I ++ +++ S+
Sbjct: 573 EIVKK---AKEEIDEQIKEVLNLKQQLDREDLNKELEKARKKIKNTMKGLAYEENILYSK 629
Query: 663 TNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
+ Q G++V V + + V+E VQ G M++ + ++ S
Sbjct: 630 EDKEKSLNQIEKGDRVFVSTFHQE-GVVLESDDKKREAFVQLGAMKMNLPYEVLQKPKKS 688
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDI 780
K+ D Q AG + S + + LDL R+E + D+
Sbjct: 689 KK---------------DSQYSGAGKILKHKSKNIKTEIDLRGLDLETARIELEKYLDDV 733
Query: 781 ALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
L+ S + +IHG+GT V+K+ V EIL+++ V Y
Sbjct: 734 VLSGL---SQVTIIHGLGTFVLKKGVEEILKHYAPVKSY 769
>gi|157693276|ref|YP_001487738.1| recombination and DNA strand exchange inhibitor protein [Bacillus
pumilus SAFR-032]
gi|157682034|gb|ABV63178.1| recombination and DNA strand exchange inhibitor protein MutS2
[Bacillus pumilus SAFR-032]
Length = 786
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 249/847 (29%), Positives = 402/847 (47%), Gaps = 129/847 (15%)
Query: 17 LEESQKLLNQTSAA---LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
+E Q LL + + A + + S P + DI + A G LSPSE+ + L
Sbjct: 41 IETIQHLLEEVAEAQDVIRLKGSAPF--GGLTDIRRAVKRAEIGSTLSPSELMEIAGLLY 98
Query: 74 AVNNVWKKLTEAAE--LDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
AV N+ LT E +D L Y+ L LL + E+E IG + +LD A
Sbjct: 99 AVKNMKHFLTSMYEDGVDIPRLHTYAETLILLPDIR--KEIESCIGDNGE-----VLDHA 151
Query: 132 SEDLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
+ L IR + R++E+ L+++++ +A + ++T R R + +K +
Sbjct: 152 TPALRTIRTQL-RSLESKVRDKLEAMIRSQSASKM----LSDTIVTIRNDRFVIPVKQEY 206
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ GI + SSSGAT F+EP+ V+ NN + E E IL +LT +++
Sbjct: 207 RSNY-GGIVHDQSSSGATLFIEPQVVVDVNNTLQQTRLKEKQEVEKILQMLTESVSEHIG 265
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
E+ + + + +D FA+A +A+ P ++ Q + + +HPLL
Sbjct: 266 ELLHNVKELQTLDFIFAKAKYAKTEKATKPAVNDQGEIYLKRA------RHPLL------ 313
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
P V N DI++ + +VITGPNTGGKT
Sbjct: 314 ----------PRDQVVAN-------------------DIELGKDFSTIVITGPNTGGKTV 344
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KTLGL +LM++AGL++P + + FD + ADIGD QS+EQ+LSTFS H+ IVDIL
Sbjct: 345 TLKTLGLLTLMTQAGLHIPVEEGSEVAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDIL 404
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ ++ SLVL DE+G+GTDP+EG ALA SIL + + TTHY +L
Sbjct: 405 KNLTSNSLVLFDELGAGTDPAEGAALAMSILDEVHQTNARVIATTHYPELKAYGYNREGV 464
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
NA+ EF +ETL PTYR+L G G SNA I+K +G +I RA+ + E Q
Sbjct: 465 TNASVEFDIETLSPTYRLLIGVPGRSNAFEISKRLGLPDHLIDRAKADMHAEHNEVDQ-- 522
Query: 547 KSELYQSLMEERRKLESQARTAASLHAEIMDLYREIE------DEAKDLDRRAAHLKAKE 600
+ SL + +++ E + E L++E++ +E KD A LKAKE
Sbjct: 523 ---MIASLEDSKKQAEEELHETEVYRKEAEKLHKELQRQILEWNEQKDKLLEEAELKAKE 579
Query: 601 TQQVQQELNFAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
+++Q A + + ++Q+ +++ R E+ K E A+ P+ D
Sbjct: 580 --KIEQ----ASKEAEEIIQELRSIKSEHRSFKEHELIDARKRLEEAV--------PEFD 625
Query: 658 FSVSETNTSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
Q G++V V + G K T++E GD + VQ G ++++VK+ ++
Sbjct: 626 RKKKPEPAKKAVRQLKSGDEVKVLTFGQK-GTLLEQTGDKEWS-VQMGILKMKVKEKDME 683
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
I + AP ++++ A ++ + Y ++ LDLRG R E A
Sbjct: 684 FIKS---------APEFKQEK-------AITAVKGKDYHVSLE-----LDLRGERYENAL 722
Query: 776 HQL-----DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYG 828
++ D LA + S +IHG GTG +++ V E+L+ H V A++ ++ G
Sbjct: 723 SRVEKYLDDAVLAGYPRVS---IIHGKGTGALRKGVQELLKQHRSVKNARFGEQGEGGSG 779
Query: 829 CTVAYIK 835
T+ +K
Sbjct: 780 VTIVELK 786
>gi|397691555|ref|YP_006528809.1| MutS2 family protein [Melioribacter roseus P3M]
gi|395813047|gb|AFN75796.1| MutS2 family protein [Melioribacter roseus P3M]
Length = 782
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 213/781 (27%), Positives = 372/781 (47%), Gaps = 101/781 (12%)
Query: 49 GILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNF 108
I S + G +LS EI + R + + L + D +PL EL
Sbjct: 75 AIYRSRIEGVVLSSKEIREIYRLAQMSRKMVGYLKPEDQTD-------TPLDELRNALTV 127
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIRAE-RKRNM---ENLDSLLKKVAAQIFQAG 164
E+ I D + D AS L+ IR++ R++ + + ++ LLKK++ +
Sbjct: 128 DKVFEKNIEKIFDENW-DVKDDASPALKSIRSDIREKELSLQKTVNRLLKKLSEEYL--- 183
Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
+ + T+R R+ + +KA HK + G + SS+G T ++EP +E NN + L
Sbjct: 184 -VQEEYFTQRDGRIVLPVKAEHKRHVK-GFIHSESSTGQTVYIEPAEILELNNDILSLKF 241
Query: 225 SEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHV 284
+E E IL ++T +IA +E+ + + +D FARA +A + G P
Sbjct: 242 AEKREIEKILLVITRQIAAKSQELLDAYNIITALDTLFARAKYALEIIGSIP-------- 293
Query: 285 SFDSSINIEGI--KHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVP 342
+FD+ IE I +HP+LL + L ++ VP
Sbjct: 294 TFDNGKPIELIDARHPILL----KKLGFEAT---------------------------VP 322
Query: 343 IDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADI 402
+++K+ + +++V+TGPN GGKT ++KT+GL LM+++G+ +P L F+ +L DI
Sbjct: 323 LNLKI-TDQKILVLTGPNAGGKTVALKTIGLLVLMAQSGIPIPCHPDSNLHIFEKVLVDI 381
Query: 403 GDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRD 462
GD+QS+E +LSTFS H++ I ILE + +LVL+DE+G+GTDP EG A+AT IL LRD
Sbjct: 382 GDYQSIEDDLSTFSSHLTNIKSILENANESTLVLLDEVGTGTDPVEGAAIATGILISLRD 441
Query: 463 RVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIG 522
+ L V TTH+ L + ++ +F+N + EF E L+PTYR G G S A IA IG
Sbjct: 442 KGALVVATTHHGSLKLIANQLDKFQNCSMEFDSEELKPTYRFNQGMPGSSYAFEIATRIG 501
Query: 523 FDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREI 582
FD K I +++ + + + + E + ++ L +Q + + L
Sbjct: 502 FDEKFIDLSKRYI-----DSDKTKIEEFLIDIEKKSHDLRNQIHNLELENLRLKSLANLY 556
Query: 583 EDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESE 642
+D+ L+++ + ++ Q+ N ++ +++ +R + AD+ +IK+ +
Sbjct: 557 QDKINKLEKQKKEI----LEEAHQKANILLSDVNRKIENAIKNIRQSRADK--EVIKKEK 610
Query: 643 SAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
S I + + + S +E +SS+ G+ V +K + + E+ D D L+
Sbjct: 611 SEIETVKKKTLSYLEKSRTE-ESSSYKLNVGDYVSIKGTT-SVGVLDEIDEDKDKALITI 668
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G ++++ K +++ P S + + + + + Y
Sbjct: 669 GSLKIKAKYSSLVPAKKSDFR--------------EYEKKKVITDYDHVKY--------- 705
Query: 763 SLDLRGMRVEEASHQ----LDIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAK 818
LD+RGMR +EA + LD +L R + ++HG GTG +K+ IL+ + V
Sbjct: 706 RLDIRGMRSDEAEFEIIRFLDDSLMYGLER--VEILHGKGTGALKQLAHSILKKYKGVKN 763
Query: 819 Y 819
Y
Sbjct: 764 Y 764
>gi|20808111|ref|NP_623282.1| recombination and DNA strand exchange inhibitor protein
[Thermoanaerobacter tengcongensis MB4]
gi|254479026|ref|ZP_05092382.1| MutS2 family protein [Carboxydibrachium pacificum DSM 12653]
gi|23821879|sp|Q8R9D0.1|MUTS2_THETN RecName: Full=MutS2 protein
gi|20516697|gb|AAM24886.1| MutS-like ATPases involved in mismatch repair, family 1
[Thermoanaerobacter tengcongensis MB4]
gi|214035022|gb|EEB75740.1| MutS2 family protein [Carboxydibrachium pacificum DSM 12653]
Length = 790
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 210/716 (29%), Positives = 350/716 (48%), Gaps = 115/716 (16%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS L+ IR ++ E + S L + + + + +P+IT R+ R V +K +
Sbjct: 147 ISDEASPVLKAIRRQKASINEKIKSTLNSIIST--RQKELQEPIITMRQGRYVVPVKQEY 204
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
+ + GI + SS+GAT F+EP V+ NN L E E IL L+ E+ K+
Sbjct: 205 RNVFK-GIIHDQSSTGATLFIEPIQVVDLNNELRELELKEQKEIERILFELSQEVKKNAE 263
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
I ++ V E+D FA+A ++ + P L++ +V N++ +HPL+
Sbjct: 264 AIFKDVEVVSELDFLFAKARYSIKIKASRPELNTSGYV------NLKKARHPLI------ 311
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
+P K VPIDI + E +VITGPNTGGKT
Sbjct: 312 ---------DPEKV--------------------VPIDIHIGREFTTLVITGPNTGGKTV 342
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL +LM+ AG+ +PA+ ++ F+ + DIGD QS+EQ+LSTFS H++ IV IL
Sbjct: 343 TLKTVGLLTLMAMAGINIPAEEKSQISIFEDVFVDIGDEQSIEQSLSTFSSHMTNIVSIL 402
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
+ V++ SLVL+DE+G+GTDP EG ALA SIL +L + TTHY++L K
Sbjct: 403 KKVNKNSLVLLDELGAGTDPLEGSALAMSILDFLHRTGCRTIATTHYSELKQYALKTKGV 462
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQ 544
ENA+ EF +ETLRPTYR++ G G SNA I++ +G +II+ A+ + E +R E
Sbjct: 463 ENASVEFDVETLRPTYRLIIGIPGRSNAFEISRRLGLSEEIIENAKSYMSGEAIRFE--- 519
Query: 545 HRKSELYQSLMEERRKLESQAR------------------TAASLHAEIMDLYREIEDEA 586
++ + + E+R+ LE+ + L ++ + +E +++A
Sbjct: 520 ----DVIKDVEEKRKDLENAYQEVERLKKEVEVLKEELEKEKRKLESQKDKILKEAKEKA 575
Query: 587 KDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
+++ + A A+E + +E + D +Q+ +++ + ++K E +
Sbjct: 576 REIIKEAKQ-TAEEVIKRIKEAEEKEKNKDRAIQEIREKIKKNLEELEEEVLKPKEFSYG 634
Query: 647 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
I PD + + G+ V++ L D+ V+ P V VQ G ++
Sbjct: 635 KI-----PD-------------SLKAGQTVYIVPL-DQNGIVLSPPDASGNVEVQAGILK 675
Query: 707 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA-SYGPRVQTSKNSLD 765
+ V +N+R +++ R NE+A S P SLD
Sbjct: 676 MTVHISNLRVKEEQEQEEVKKGYSRF--------------INEKAKSISP-------SLD 714
Query: 766 LRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+RGM +++A +++ I A + + +IHG GTGV++ + + LRN V +
Sbjct: 715 VRGMTLDDALLEVEKYIDDAYLAGLNQVTIIHGRGTGVLRTGIAKFLRNSKYVKSF 770
>gi|167760788|ref|ZP_02432915.1| hypothetical protein CLOSCI_03173 [Clostridium scindens ATCC 35704]
gi|167661675|gb|EDS05805.1| MutS2 family protein [Clostridium scindens ATCC 35704]
Length = 791
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 198/659 (30%), Positives = 309/659 (46%), Gaps = 79/659 (11%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R C+ +K+ ++ + G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCIPVKSEYRSQV-QGLIHDQSSTGSTLFIEPMSVVKLNNDLKELYGKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ ++A+ I+ + E+D FAR A M+ P+ ++ D
Sbjct: 245 EIQVILARLSVDVAEYIDAIRTDYSVLTELDFIFARGILALDMNASMPLFNT------DG 298
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I I +HPLL + VPI + +
Sbjct: 299 RIYIREGRHPLLDKKKV-----------------------------------VPITVMLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+++ITGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 DAFDLLIITGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELAVFHDVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKQVDERSLVLFDELGAGTDPTEGAALAIAILNHLHGRGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF LETLRPTY +L G G SNA IA +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDLETLRPTYHLLIGIPGKSNAFAIAGKLGLPDYII 503
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
+ A R Q +L L +R ++ + A+ E+ L E +++ +
Sbjct: 504 EEA-----RTHLTEQDESFEDLLTDLETSKRTIQKEQEEIAAYRRELERLKAETKEKQER 558
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINS----LIKESES 643
L+ + + + ++ L AK D +++F +++ SA E+ L K+ ++
Sbjct: 559 LEAQRERILREANEKAHSILADAKETADETMRNFRKFGKESISAAEMEKERERLRKKMDA 618
Query: 644 AIAAI-VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
A + + +E +P + F + GE V V S+ + TV +P V VQ
Sbjct: 619 ARSGMKMEPQKPR-----KQHKPGDF--KLGESVKVLSM-NLTGTVTALPDSKGNVTVQM 670
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G +R +V +++ I P +Q + + S P +
Sbjct: 671 GILRSQVNISDLEIIEEK---------PSYTAKQMQKTGKGKLKMGKSFSVSPEI----- 716
Query: 763 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+L G V+EA +LD L A S + V+HG GTG ++ + L+ V +
Sbjct: 717 --NLLGKTVDEAVAELDKYLDDASLAHLSTVRVVHGKGTGALRSGIHSYLKRQKHVKSF 773
>gi|336420684|ref|ZP_08600846.1| hypothetical protein HMPREF0993_00223 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336005916|gb|EGN35959.1| hypothetical protein HMPREF0993_00223 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 791
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 198/659 (30%), Positives = 309/659 (46%), Gaps = 79/659 (11%)
Query: 169 PLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIA 228
P+IT R R C+ +K+ ++ + G+ + SS+G+T F+EP V+ NN L E
Sbjct: 186 PIITMRGDRYCIPVKSEYRSQV-QGLIHDQSSTGSTLFIEPMSVVKLNNDLKELYGKEQE 244
Query: 229 EETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDS 288
E IL+ L+ ++A+ I+ + E+D FAR A M+ P+ ++ D
Sbjct: 245 EIQVILARLSVDVAEYIDAIRTDYSVLTELDFIFARGILALDMNASMPLFNT------DG 298
Query: 289 SINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVE 348
I I +HPLL + VPI + +
Sbjct: 299 RIYIREGRHPLLDKKKV-----------------------------------VPITVMLG 323
Query: 349 CETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSL 408
+++ITGPNTGGKT S+KT+GL +LM +AGL++PA + L F + ADIGD QS+
Sbjct: 324 DAFDLLIITGPNTGGKTVSLKTVGLFTLMGQAGLHIPALDRSELAVFHDVYADIGDEQSI 383
Query: 409 EQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAV 468
EQ+LSTFS H++ IV L+ V SLVL DE+G+GTDP+EG ALA +IL +L R +
Sbjct: 384 EQSLSTFSSHMTNIVSFLKQVDERSLVLFDELGAGTDPTEGAALAIAILNHLHGRGIRTM 443
Query: 469 VTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKII 528
TTHY++L ENA EF LETLRPTY +L G G SNA IA +G II
Sbjct: 444 ATTHYSELKVYALSTPGVENACCEFDLETLRPTYHLLIGIPGKSNAFAIAGKLGLPDYII 503
Query: 529 QRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKD 588
+ A R Q +L L +R ++ + A+ E+ L E +++ +
Sbjct: 504 EEA-----RTHLTEQDESFEDLLTDLETSKRTIQKEQEEIAAYRRELERLKAETKEKQER 558
Query: 589 LDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDA-SADEINS----LIKESES 643
L+ + + + ++ L AK D +++F +++ SA E+ L K+ ++
Sbjct: 559 LEAQRERILREANEKAHSILADAKETADETMRNFRKFGKESISAAEMEKERERLRKKMDA 618
Query: 644 AIAAI-VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQY 702
A + + +E +P + F + GE V V S+ + TV +P V VQ
Sbjct: 619 ARSGMKMEPQKPR-----KQHKPGDF--KLGESVKVLSM-NLTGTVTALPDSKGNVTVQM 670
Query: 703 GKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKN 762
G +R +V +++ I P +Q + + S P +
Sbjct: 671 GILRSQVNISDLEIIEEK---------PSYTAKQMQKTGKGKLKMGKSFSVSPEI----- 716
Query: 763 SLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+L G V+EA +LD L A S + V+HG GTG ++ + L+ V +
Sbjct: 717 --NLLGKTVDEAVAELDKYLDNASLAHLSTVRVVHGKGTGALRSGIHSYLKRQKHVKSF 773
>gi|409351617|ref|ZP_11234250.1| MutS2 protein [Lactobacillus equicursoris CIP 110162]
gi|407876643|emb|CCK86308.1| MutS2 protein [Lactobacillus equicursoris CIP 110162]
Length = 788
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 219/733 (29%), Positives = 344/733 (46%), Gaps = 122/733 (16%)
Query: 127 ILDRASEDLELIRAERKRN----MENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+LD AS L +R +R N E +++ + +Q + + ++T R R + +
Sbjct: 149 VLDTASAALASLRHDRLANETEIKEKMNAYTRGKMSQY-----LSEAVVTIRDDRYVIPV 203
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++Y G+ + S+SG T F+EP+ + NN L E E IL L+
Sbjct: 204 KQEYRYKFG-GVVHDQSASGQTLFVEPEAILVLNNRLQNLLAEERQEIHRILHELSLAAG 262
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ I+ + + ++D A+A A+ M +SQ ++ D S+ + +HPL+
Sbjct: 263 EEWEAIQLVAGALSQLDFLSAKAKLAKKMR------ASQPAITTDQSVKLLAARHPLI-- 314
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
+P K V DI + + V+ITGPNTG
Sbjct: 315 -------------DPKKV--------------------VANDICLGQDFDTVLITGPNTG 341
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT ++KTLGL SLM+++GL++PA ++ FD I ADIGD QS+EQ+LSTFS HI+ I
Sbjct: 342 GKTITLKTLGLLSLMAQSGLFIPAAEGSQVAIFDQIFADIGDEQSIEQSLSTFSSHITDI 401
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V I++ V+ +SLVLIDEIG+GTDP EG +LA SIL + R + +VTTHY +L
Sbjct: 402 VAIMKKVTSKSLVLIDEIGAGTDPEEGASLAISILDFFRKKQAKIMVTTHYPELKLYGYS 461
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPER 542
R NA+ EF ++TL PTYR+ G G SNA IA+ +G ++ A+KL+ +
Sbjct: 462 RERTTNASMEFDMKTLSPTYRLQMGIPGHSNAFAIARRLGMREDVVLDAEKLMSDDDSDI 521
Query: 543 QQHRKSELYQSL---MEERRKLESQARTAASLHAEI---MDLYREIEDEAKDL-DRRAAH 595
H EL + E R+KL+S A +L ++ +D+Y + + D RA
Sbjct: 522 -NHMIDELNKQTKLATENRQKLQSSLDRAKNLEKQLRDALDIYNQRAQKQLDFAQERANE 580
Query: 596 LKAKETQQVQQELNFAKVQIDTVVQDF-----------ENQLRDASADEINSLIK-ESES 643
+ AK+ ++ D ++ D ENQL DA E N L K E+
Sbjct: 581 IVAKKRKKA-----------DKIIADLEEARKNGANIKENQLMDAKG-EFNQLAKQEANL 628
Query: 644 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
A +++ + +V G++V V S G + TV + GD + V G
Sbjct: 629 AKNKVLQKEKKRHHVAV------------GDKVKVLSYG-QTGTVTKKLGDHEYE-VALG 674
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
+++++V +I + S G A+ R +++
Sbjct: 675 RIKLKVSDRDIDKLAAS----------------------GDGRGKVRATSASRSSRARSQ 712
Query: 764 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ 821
LDLRG R EEA LD S + ++HG+GTG +++ V + L+ + V +
Sbjct: 713 LDLRGQRYEEAMINLDRYFDTILLSGLSTVTIVHGIGTGAIRQGVQQYLKRNKHVKSFAY 772
Query: 822 ESPMNYGCTVAYI 834
+P N G T A I
Sbjct: 773 -APANEGGTGATI 784
>gi|312863354|ref|ZP_07723592.1| MutS2 family protein [Streptococcus vestibularis F0396]
gi|311100890|gb|EFQ59095.1| MutS2 family protein [Streptococcus vestibularis F0396]
Length = 782
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 203/727 (27%), Positives = 345/727 (47%), Gaps = 115/727 (15%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRN 202
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ G+ ++SSSG T ++EP+ ++ N +L E E T IL L+ ++ I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHEMTRILHELSNQLRPQAAAI 261
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ +D + + Q V P +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGHMDFIRGKYLYLQDKKAVIPKISD------NQTLQLLNVRHPLLVN------ 309
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
PV D+ + + +VITGPNTGGKT +
Sbjct: 310 -------------------------------PVANDLHFDEDLTAIVITGPNTGGKTVML 338
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 339 KTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDA 398
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 399 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 458
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 459 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 509
Query: 549 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 510 DVNRIIEQLEAQTVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 560
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 657
L A+ I +V D + E +S++K +S+ +++A P D
Sbjct: 561 LEKAQKDIQDMV--------DTALAESDSILKTLHDKSQLKPHEVIDAKGKLKKLAPQVD 612
Query: 658 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
S ++ ++ P+ G+ + V + G + + + Q G +++ +K
Sbjct: 613 LSKNKVLRKAKKEKTTRAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMTLKA 670
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
+ + R A P+ ++ + ++AS GPR + LDLRG R
Sbjct: 671 DEFTLV----RAQAEVKQPK-------KKQINVVKKAKKASGGPRAR-----LDLRGKRY 714
Query: 772 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 827
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 715 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 774
Query: 828 GCTVAYI 834
GCT+A +
Sbjct: 775 GCTIATL 781
>gi|256751292|ref|ZP_05492172.1| MutS2 family protein [Thermoanaerobacter ethanolicus CCSD1]
gi|256749847|gb|EEU62871.1| MutS2 family protein [Thermoanaerobacter ethanolicus CCSD1]
Length = 791
Score = 249 bits (635), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 240/830 (28%), Positives = 403/830 (48%), Gaps = 108/830 (13%)
Query: 7 QKA-QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
QKA I K +EE ++ L+ + A++ + S EDI + A +L E+
Sbjct: 33 QKASDIVIKKDIEEIERELDLLNEAISFISSYGGISFAFEDIRDYIKKAQIDSVLYNQEL 92
Query: 66 CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
+++ L V+ + E D R+ L E K + LE++I I +
Sbjct: 93 LKIKKFLNLVSKIKGYFKNLQESD-----RFVRLKEYDKKVLPIKNLEKRIENIIISEDE 147
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
I D AS L+ +R ++ E + + L + + + + +P+IT R+ R V +K
Sbjct: 148 I-ADDASPMLKSLRRQKLSINEKIRATLNSIIST--RQKELQEPIITVRQGRYVVPVKQE 204
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ GI + SSSGAT F+EP V+ NN ++ E E IL L+ E+ K
Sbjct: 205 YRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELKEKQEIQRILFELSQEVKKYS 263
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + ++ V ++D FA+A ++ + V P L++ + IN++ +HPL+
Sbjct: 264 QILFDDIEIVSDLDFIFAKAKYSLKLKAVRPELNTMGY------INLKKARHPLI----- 312
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
N E+ V PIDI + + +VITGPNTGGKT
Sbjct: 313 ------------------NQEVIV------------PIDIYIGDQFNTLVITGPNTGGKT 342
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +LM+ AGL +PA+ ++ F+ + DIGD QS+EQ+LSTFS H++ IV I
Sbjct: 343 VTLKTVGLLTLMAMAGLNIPAEERSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVSI 402
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L+ V++ LVL+DE+G+GTDP EG ALA SIL L + TTHY++L K
Sbjct: 403 LQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGAKTIATTHYSELKQYALKAPG 462
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 543
ENA+ EF++ETL+PTY+++ G G SNA I+K +G ++II+ A+K + E L+ E
Sbjct: 463 VENASVEFNVETLKPTYKLIIGLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE-- 520
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKE- 600
++ + +RR+LE + A L ++ L E+E E K L +R +AKE
Sbjct: 521 -----DIIADVESKRRELEKANQEIAFLKKDVEILKEELEKEKKKLQSERDKILKEAKEK 575
Query: 601 TQQVQQELNFAKVQIDTVVQDFE--NQLRDASADEINSLIKESESAIAAIV----EAHR- 653
+++ QE F +I +++ E Q +D E+ +K++ + V EAH
Sbjct: 576 ARKIIQEAKFTAEEIIKKIKEAEESTQNKDRIIQEVREELKKNLEELEEEVLKPKEAHYS 635
Query: 654 --PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
PD+ + E T P D+ V+ +P V +Q G +++ V
Sbjct: 636 RIPDN---LKEGQTVYIVPL-----------DQNGIVLSLPDKSGNVEIQAGILKMTVHI 681
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
+N+R + + G + +E++ Q+ S+D+RG +
Sbjct: 682 SNLRVAEEKEEEEVK--------------KGYSKFVHEKS------QSISTSIDVRGKNL 721
Query: 772 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
++A +++ I A + +IHG GTGV++ + + LR++ V +
Sbjct: 722 DDALLEVEKYIDDAYLAGLKEVTIIHGHGTGVLRTGISQFLRSNKHVKSF 771
>gi|413933872|gb|AFW68423.1| hypothetical protein ZEAMMB73_052095, partial [Zea mays]
Length = 859
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 231/782 (29%), Positives = 374/782 (47%), Gaps = 113/782 (14%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIA--GILNSAVSGQLLSPSEICAVRRT 71
S E+SQ LL +T AA+ ++ + +D S ++ +A ++S G ++ E AV
Sbjct: 85 SYEQSQMLLQETEAAVLLLDNAGGAMDFSGLDTVAIESAIHSVSGGAVIKGLEAMAVTSL 144
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
+ V ++ + A +LD S R + L E + + L + I +D + D A
Sbjct: 145 MMFVESLQVNIKAAMKLDEGSCSRLTTLTETILDAVINKSLVKSIQDIVDDDG-SVKDTA 203
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
S +L R + +R L L+ K+ + + I R C+ +
Sbjct: 204 SPELRRYREQVQRLENRLYQLMDKLMRNADDEASLSEVCIVN--GRCCIRTTMDNSSFF- 260
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKY 250
DG+ L+ S S A +EP AV N+ E++ S + +A+ E +LS LT +I I+
Sbjct: 261 DGLLLS-SRSDAGSMIEPIVAVPLND-ELQESRALVAKAELDVLSKLTDKIRLDLDSIQN 318
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILS----SQSHVSFDSSINIEGIK---------- 296
L+ +++D ARA ++ DG P L V+ + +I+ I
Sbjct: 319 LLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSATGGSIKQISSAQLPKKAWK 378
Query: 297 -------HPLLL-------GSSLRSLSAASSN-------------SNPLKSDVENSEMTV 329
HPLLL + R +++A++ + L SD+++ ++ V
Sbjct: 379 LYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAEEDQLASDLDSMKLRV 438
Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKA--------- 380
L K D PVP+D + ET V+VITGPNTGGKT S+KT+GLASLM+K
Sbjct: 439 SQLEK---DQPVPVDFMIAEETTVLVITGPNTGGKTISLKTVGLASLMAKIVAKLAAVVT 495
Query: 381 ---------------GLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
GLY+ A ++PWF+ + ADIGD QSL Q+LSTFSGH+ +I I
Sbjct: 496 VVVSCRLLVADGATLGLYILASEPVKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAI 555
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVG-LAVVTTHYADLSCLKDK-- 482
+ ESLVL+DE+G+GT+P EG AL S+L+ + L + TTH+ +L LK +
Sbjct: 556 RAESTSESLVLLDEVGAGTNPLEGAALGMSLLESFAEAGSFLTLATTHHGELKTLKYRLH 615
Query: 483 ----DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--- 535
+ FENA EF E L+PT++ILWG G SNA+NI + +G I++ +++L+
Sbjct: 616 FFLHNNSFENACMEFDEENLKPTFKILWGIPGRSNAINITERLGLPLDIVESSRRLLGTA 675
Query: 536 -----------ERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD-LYREIE 583
ERL+ E QQH + Y L+ + ++L + A I+D + +
Sbjct: 676 GAEINALIMDMERLKQEYQQHLQEAQY--LLMQSKELHNNLELA---QKSIVDHTSAQRK 730
Query: 584 DEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESES 643
+A+ + A ++ ++ QQ F + I V++ EN + DA +D + + + S
Sbjct: 731 RKARVISEYAVMARSIIRKKFQQ---FQESAIAERVKEEENAVNDAKSDRVKDPMPANTS 787
Query: 644 AIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG 703
AI I D ++ + P+ G+ V+V L ++ ATVV++ + V VQ G
Sbjct: 788 AIGNI---QNIDTSLGMTANDDEDEVPEVGDSVYVPKLKNE-ATVVKIDSSKNEVQVQAG 843
Query: 704 KM 705
M
Sbjct: 844 MM 845
>gi|148270617|ref|YP_001245077.1| MutS2 family protein [Thermotoga petrophila RKU-1]
gi|189030430|sp|A5IMS8.1|MUTS2_THEP1 RecName: Full=MutS2 protein
gi|147736161|gb|ABQ47501.1| MutS2 family protein [Thermotoga petrophila RKU-1]
Length = 757
Score = 248 bits (634), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 232/800 (29%), Positives = 356/800 (44%), Gaps = 110/800 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
+ + DI+ + SG L P E+ V L + + KK E E YS L
Sbjct: 60 IKGLNDISQEVERVKSGSALEPWELLRVSVFLEGCD-ILKKDFEKRE--------YSRLK 110
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
E + + E++ CI+ I DRAS L IR E+KR L S +K+ A
Sbjct: 111 ETFSRLSSFRDFVEEVNRCIEQDGEIS-DRASPRLREIRTEKKR----LSSEIKRKADDF 165
Query: 161 FQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ + + + R R +KAS + + GI ++SSSGAT F+EP VE NN
Sbjct: 166 VRTHSQILQEQMYVYRDGRYLFPVKASMRNAV-RGIVHHLSSSGATVFLEPDEFVELNNR 224
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L E E + IL LT + +++ ++ + D +AR FA+ +G
Sbjct: 225 VRLLEEEERLEISRILRQLTNILLSRLNDLERNVELIARFDSLYARVKFAREFNGTV--- 281
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
V S I + +HPL+ +
Sbjct: 282 -----VKPSSRIRLVNARHPLIPKERV--------------------------------- 303
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VPI++++ R +ITGPN GGKT ++KT+GL + + +G LP L F I
Sbjct: 304 --VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPKI 361
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
+ADIG+ QS+EQ+LSTFS H+ +IV+I++ +SLV++DE+GSGTDP EG ALA +I++
Sbjct: 362 MADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAVAIIE 421
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
L ++ VTTH + NA+ EF ETL PTYR+L G G S+A IA
Sbjct: 422 DLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSHAFQIA 481
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
+ +G D++II+ A R R R++ L +SL E+ LE + R E M L
Sbjct: 482 EKLGLDKRIIENA-----RSRLSREEMELEGLIRSLHEKISLLEEEKRKLQKEREEYMKL 536
Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
+ E++ K L R KE +++ + K ++D + + + S DE+ +
Sbjct: 537 REKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAI----HVAKTGSVDEMREAV 592
Query: 639 KESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
K +E + D + + E P G+ V ++ G + VVEV T
Sbjct: 593 K--------TIEKEKKDLEQKRIEEATEEEIKP--GDHVKMEG-GTSVGKVVEV--KSGT 639
Query: 698 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 757
LV +G +R++V P+ K+ + SY P
Sbjct: 640 ALVDFGFLRLKV------PVSKLKKAKKE-----------------EKEESSAVSYRP-- 674
Query: 758 QTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
+ + +D+RGM VEEA + I S ++IHG GTG + V EILR R
Sbjct: 675 SSFRTEIDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEILRKDKR 734
Query: 816 VAKYEQESPMNYGCTVAYIK 835
V + +P G V ++
Sbjct: 735 VVSFRFGTPSEGGTGVTVVE 754
>gi|303233786|ref|ZP_07320440.1| putative recombination and DNA strand exchange inhibitor protein
[Finegoldia magna BVS033A4]
gi|302495220|gb|EFL54972.1| putative recombination and DNA strand exchange inhibitor protein
[Finegoldia magna BVS033A4]
Length = 783
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 236/846 (27%), Positives = 405/846 (47%), Gaps = 131/846 (15%)
Query: 18 EESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+E ++ L++T A++M+ S P I A I++ + G ++ P + + + L +V
Sbjct: 41 DEIRQSLDETYEAMSMIYKFSNPPIYEIINVKASIMHVSKGGYIV-PEVLLKIGQILNSV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI---ILDRAS 132
+++ + E+ E + + Y ++ ++ + L E E+ + I+ ++ I D AS
Sbjct: 100 HDIKRYAGESDE----NHENYPMIMAMMDS---LVE-EQDLVATINNAIISEDEISDNAS 151
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
+L IR +++ EN+ + + + QA + + ++T R R + +K SHK
Sbjct: 152 RNLARIRQTKRQKTENIRDKINSILSSNDQA--LQENIVTMRDDRYVIPVKVSHKSSFK- 208
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + SSSG T ++EP VE NN L E E IL ++ + + I
Sbjct: 209 GIVHDHSSSGQTVYIEPMEVVELNNELRMLEAEEREEIIRILKEISDRVYDVKDSIFVDQ 268
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
D + ++D FA+A +A +D P L++ + +F ++ +HPLL +
Sbjct: 269 DVLSKLDFIFAKAKYAIEIDATNPKLNTNGYFNFKNA------RHPLLDKKKV------- 315
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
VPI I + + +VITGPNTGGKT ++KT+G
Sbjct: 316 ----------------------------VPISIYLGDDYNTLVITGPNTGGKTVTLKTVG 347
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L +LM+++G+ +P + + FD I DIGD QS+EQ+LSTFS H+ IV I+ ++
Sbjct: 348 LITLMAQSGILIPVDENSEVAIFDNIFTDIGDEQSIEQSLSTFSAHMKNIVHIVNNITFN 407
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL DE+G+GTDP+EG ALA +IL+ + + TTHY+ L + +N + E
Sbjct: 408 SLVLFDELGAGTDPTEGAALAIAILRIFLYKSIRTIATTHYSQLKIFALTEKYVKNGSVE 467
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F + TL PTY++ G G SNA I++ +G D II A++++ Q+ + E
Sbjct: 468 FDVNTLSPTYKLRIGIPGKSNAFEISRRLGLDDDIINNAKEILS------QEDKDFEDVL 521
Query: 553 SLMEERRKL--ESQARTAASLHAEIM--DLY-REIE----------DEAKDLDRRAAHLK 597
S +E ++K E + R + D Y +EIE +EAK+ + +++
Sbjct: 522 SDIESKKKQIDEDKQRQLELKEDLLKLRDRYEKEIEKTKLEKEKIINEAKE-NANEIYMR 580
Query: 598 AK-ETQQVQQELNFAKVQID--TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP 654
AK E++++ +L F + + D TV D EN+ N IK+S +
Sbjct: 581 AKEESRELINKLKFLEKESDARTVANDVENKF--------NKRIKKSSNKKL-------- 624
Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLG-DKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
++ET+ Q G++V + LG ++ T+V P +LVQ G +++ N
Sbjct: 625 -----LNETSKKQ-KLQLGDEVEI--LGIEQQGTIVSEPDKKGDLLVQVGILKINANVKN 676
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
++ I K++E QS + S + + K+ +DLRG +EE
Sbjct: 677 LKKI----------------KEKEVIQSSKSIKSIIKNKANSDI---KSEIDLRGKNIEE 717
Query: 774 ASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE--SPMNYGC 829
A ++LD I + +IHG GTG++++ + E LR+ RV K E + G
Sbjct: 718 AIYELDKYIDDCVIVGLKKVNIIHGKGTGMLRKGIREYLRSDKRVKKIEDAGYNEGGLGA 777
Query: 830 TVAYIK 835
T Y+K
Sbjct: 778 TFIYLK 783
>gi|167037192|ref|YP_001664770.1| recombination and DNA strand exchange inhibitor protein
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167040669|ref|YP_001663654.1| recombination and DNA strand exchange inhibitor protein
[Thermoanaerobacter sp. X514]
gi|300914710|ref|ZP_07132026.1| MutS2 family protein [Thermoanaerobacter sp. X561]
gi|307724056|ref|YP_003903807.1| MutS2 family protein [Thermoanaerobacter sp. X513]
gi|320115610|ref|YP_004185769.1| MutS2 family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166854909|gb|ABY93318.1| MutS2 family protein [Thermoanaerobacter sp. X514]
gi|166856026|gb|ABY94434.1| MutS2 family protein [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|300889645|gb|EFK84791.1| MutS2 family protein [Thermoanaerobacter sp. X561]
gi|307581117|gb|ADN54516.1| MutS2 family protein [Thermoanaerobacter sp. X513]
gi|319928701|gb|ADV79386.1| MutS2 family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 791
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 239/827 (28%), Positives = 398/827 (48%), Gaps = 102/827 (12%)
Query: 7 QKA-QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
QKA I K +EE ++ L+ + A++ + S EDI + A +L E+
Sbjct: 33 QKALDIVIKKDIEEIERELDLLNEAISFISSYGGISFAFEDIRDYIKKAQIDSVLYNQEL 92
Query: 66 CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
+++ L V+ + E D R+ L E K + LE++I I +
Sbjct: 93 LKIKKFLNLVSQIKGYFKNLQESD-----RFVRLKEYDKKVLPIKNLEKRIENIIISEDE 147
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
I D AS L+ +R ++ E + + L + + + + +P+IT R+ R V +K
Sbjct: 148 I-ADDASPMLKALRRQKLSINEKIRATLNSIIST--RQKELQEPIITVRQGRYVVPVKQE 204
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ GI + SSSGAT F+EP V+ NN ++ E E IL L+ E+ K
Sbjct: 205 YRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELKEKQEIQRILFELSQEVKKYS 263
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + ++ V E+D FA+A ++ + V P L++ + IN++ +HPL+
Sbjct: 264 QILFNDIEIVSELDFIFAKAKYSLKLKAVRPELNTMGY------INLKKARHPLI----- 312
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
N E+ V PIDI + + +VITGPNTGGKT
Sbjct: 313 ------------------NQEVVV------------PIDIHIGKQFNTLVITGPNTGGKT 342
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +LM+ AGL +PA+ ++ F+ + DIGD QS+EQ+LSTFS H++ IV I
Sbjct: 343 VTLKTVGLLTLMAMAGLNIPAEEKSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVSI 402
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L+ V++ LVL+DE+G+GTDP EG ALA SIL L + TTHY++L K
Sbjct: 403 LQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGAKTIATTHYSELKQYALKIPG 462
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 543
ENA+ EF +ETL+PTY+++ G SNA I+K +G ++II+ A+K + E L+ E
Sbjct: 463 VENASVEFDVETLKPTYKLIISLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE-- 520
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDL--DRRAAHLKAKE- 600
++ + +RR+LE A L ++ L E+E E K L +R +AKE
Sbjct: 521 -----DIIADVESKRRELEKANHEIAFLKKDVEILKEELEKEKKKLQSERDKILKEAKEK 575
Query: 601 TQQVQQELNFAKVQIDTVVQDFE--NQLRDASADEINSLIKESESAIAAIV----EAHRP 654
+++ QE F +I +++ E Q +D E+ +K++ + V EAH
Sbjct: 576 ARKIIQEAKFTAEEIIKKIREAEESTQNKDRIIQEVREELKKNLEELEEEVLKPKEAHYS 635
Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
++ E T P D+ V+ +P V VQ G +++ V +N+
Sbjct: 636 RIPDNLKEGQTVYIVPL-----------DQNGIVLSLPDKSGNVEVQAGILKMTVHISNL 684
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
R + + G + +E++ Q+ S+D+RG +++A
Sbjct: 685 RVAEEKEEEEVK--------------KGYSKFVHEKS------QSISTSIDVRGKNLDDA 724
Query: 775 SHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
+++ I A + +IHG GTGV++ + + LR++ V +
Sbjct: 725 LLEVEKYIDDAYLAGLKEVTIIHGRGTGVLRTGISQFLRSNKHVKSF 771
>gi|257126841|ref|YP_003164955.1| MutS2 family protein [Leptotrichia buccalis C-1013-b]
gi|257050780|gb|ACV39964.1| MutS2 family protein [Leptotrichia buccalis C-1013-b]
Length = 779
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 218/815 (26%), Positives = 394/815 (48%), Gaps = 115/815 (14%)
Query: 39 LDLSTIEDIAGILNSA-VSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
L+L+ + +I ++NS + G LS ++ +++ L +++ A+ D +Y
Sbjct: 62 LELAGLANITKMMNSIDIIGSYLSAEDLAVLKKNL----TIFRISKSRAKNVRD---KYR 114
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
+ L + + ++E I I+ + ++ D AS L +R +++ N+ ++
Sbjct: 115 TIWNLFSDVEEVKDIENFISEAINDEG-VLKDEASIGLRDVRRQKQNINANIKEKFDELI 173
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ I + +IT+R R + +K K L+ GI + S++G+T ++EP V NN
Sbjct: 174 SNKSTQNAIQERIITQRNDRYVIAVKTDFKGLIK-GIEHDRSATGSTVYIEPLNVVSLNN 232
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSERE----IKYLMDRVLEIDLAFARAGFAQWMDG 273
E E IL LT E+ K+++E IK +++R +D A+ ++
Sbjct: 233 KLREYEAREREEIRKILLRLT-ELVKTKKEEILEIKEILER---LDFIDAKTTYSVNKKC 288
Query: 274 VCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLS 333
+ P + ++ ++ + +HPL+ E TV
Sbjct: 289 IVPKIINKEYLKLVEA------RHPLI------------------------GENTV---- 314
Query: 334 KGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLP 393
VPI+ ++ +++ITGPNTGGKT ++K GL ++M+ +G+ +PA +
Sbjct: 315 -------VPINFELGNPENIMLITGPNTGGKTVTLKVAGLLTIMALSGIPIPANEKTEIG 367
Query: 394 WFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALA 453
+F +LADIGD QSLEQNLS+FSGH+S+I DI+E + +SLVL+DE+GSGTDP EG A A
Sbjct: 368 YFHNVLADIGDEQSLEQNLSSFSGHVSKIKDIIENANSKSLVLMDELGSGTDPMEGAAFA 427
Query: 454 TSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSN 513
+I+ YL + +++TTHY+++ T ++A+ EF++ETL PTYR+L G G+SN
Sbjct: 428 MAIIDYLNKKHVTSIITTHYSEVKAYAFNTTGIKSASMEFNVETLSPTYRLLEGIPGESN 487
Query: 514 ALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHA 573
AL IA+ G ++I+ A+ + R E+ +S+ E+ +LE+ +
Sbjct: 488 ALIIARKYGISEEVIENAKSYI-----SEDNQRVEEMLKSIKEKNDELETMQAQLEATRT 542
Query: 574 EI---MDLYRE----IEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 626
E+ +Y + +E+E ++ +RA + +Q + AK ID + + E++
Sbjct: 543 ELDKQKSIYEQNMIKLENEKNEIIKRAYEEADNYLKNMQAK---AKNLIDKINSE-ESKK 598
Query: 627 RDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDK 684
DA K ++ ++ + E+ D +V E + F GE+V VK++
Sbjct: 599 EDA---------KNAQRSLNMLRESFITDKKKNVKEKKVVTQNVDFAVGEEVLVKTMNQN 649
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
+ +P ++ + VQ G +++ V ++I I K N A R Q
Sbjct: 650 GKILKIMP--NNRIQVQTGILKLVVSTDDIVKIQKKKTNKFKNFASLKRTSQ-------- 699
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
+ +DLRGM +EA +L+ + A +++IHG GT V+
Sbjct: 700 ---------------VRGEIDLRGMNADEAIAELETYMDRAMLTGYHEIYIIHGKGTMVL 744
Query: 803 KERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
++++ E LR V +++ ++ GCTV +K
Sbjct: 745 RKKIHEYLRTSKYVTEFKDANQNEGGIGCTVVILK 779
>gi|257066824|ref|YP_003153080.1| MutS2 family protein [Anaerococcus prevotii DSM 20548]
gi|256798704|gb|ACV29359.1| MutS2 family protein [Anaerococcus prevotii DSM 20548]
Length = 781
Score = 248 bits (634), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 242/843 (28%), Positives = 386/843 (45%), Gaps = 145/843 (17%)
Query: 24 LNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNV--WK 80
L +TSA + +++ +DL + D+ I+ +L P E+ V LR + +
Sbjct: 47 LYETSAMVDVIRKNGNIDLFGLYDLTEIVAYIRKNGILDPGELLKVLDLLRVSEYLKDYG 106
Query: 81 KLTEAAELDGDSLQRYSPLLELLKN---CNFLTELEEKIGFCIDCKLLIILDRASEDLEL 137
K E ++ GD R S + + LKN + + E E I D AS L
Sbjct: 107 KNIEDRKI-GDIFSRIS-INDFLKNEIDRSIINEEE-------------IADSASSTLRN 151
Query: 138 IRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALN 197
IR +++R ++ L + +++ R R V +K + + L+ GI +
Sbjct: 152 IRRQKQRKEADIRIKLNSYITNSKYDDALQDKVVSVRDGRYVVPVKTNKRALIG-GIVHD 210
Query: 198 VSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT--AEIAKSEREIKYLMDRV 255
SSSG T F+EP VE NN +L + EI EE I +L + +A+ +++ L ++
Sbjct: 211 KSSSGNTLFIEPGAIVELNN---QLRDLEIKEEDEIRRILDRLSRLAQG-FDVELLENQK 266
Query: 256 L--EIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
L ID A++ FA + PI++ + V S+ +HPLL G
Sbjct: 267 LIARIDFLQAKSRFAIENEYSLPIITDEKKVDLKSA------RHPLLPGKV--------- 311
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
VPID+++ + ++ITGPNTGGKT S+KT+GL
Sbjct: 312 ---------------------------VPIDVRIGGDYTTLIITGPNTGGKTVSLKTVGL 344
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
S M++ L++PA +L FD I DIGD QS+E +LSTFS ++ IVDIL+ + S
Sbjct: 345 ISAMAQTALFIPAYEGSKLCVFDDIFLDIGDTQSIEMSLSTFSASLTNIVDILKNSTENS 404
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
LVL+DEIGSGTDP EG ALA SIL L + + TTHY++L + + NA+ EF
Sbjct: 405 LVLLDEIGSGTDPVEGAALAISILNSLTQKKVMTFSTTHYSELKYYAVETSGVMNASVEF 464
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQQHRKSELY 551
++TL PTY++ G+ G SNA I+K +G +I+ A+ L+ + + E
Sbjct: 465 DVDTLSPTYKLEIGTPGKSNAFEISKRLGLPYEILNNAKNLIGDDTKNINKILAEIEEDK 524
Query: 552 QSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDR----RAAHLKAKETQQVQQE 607
+ + ++ +++ES R A + E+ + + ++ + +D+ R +A + K ++ Q
Sbjct: 525 KEIEDKNKEIESYKREIAKIRNELKEKSKRLDQKEEDILREAEDKANSILDKANKRSQDM 584
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEIN-SLIKESESAIAAIVEAHRPDDDFSVSETNTS 666
L AK ++R+A+ +I+ SL K +E R + E+ +
Sbjct: 585 LKEAK------------KMRNANTSDIDRSLNKIRHEYKEGRIE--RKGEGLYTKESKNA 630
Query: 667 SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYG--KMRVRVK-----------KNN 713
+ + G+ V + L +K A V+E P + VQ G KM +K + N
Sbjct: 631 PDSLKVGDTVLIAGLNEK-AEVIEAPDKKGNIKVQMGILKMDSNIKNVSKIKGDNQTEKN 689
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
IR + N+K+ A N +P +LDLRG R +E
Sbjct: 690 IRKVYNTKK--AMNISP--------------------------------TLDLRGQRYDE 715
Query: 774 ASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYE--QESPMNYGC 829
A LD L A S +IHG GTG + + V EIL R+ Y + YG
Sbjct: 716 AMRNLDKYLDDAMLAGLSKAKIIHGKGTGALIKGVGEILEGDKRIEDYRFGDDKEGGYGV 775
Query: 830 TVA 832
T+
Sbjct: 776 TIV 778
>gi|237743809|ref|ZP_04574290.1| DNA mismatch repair protein mutS [Fusobacterium sp. 7_1]
gi|229432840|gb|EEO43052.1| DNA mismatch repair protein mutS [Fusobacterium sp. 7_1]
Length = 778
Score = 248 bits (634), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 219/815 (26%), Positives = 385/815 (47%), Gaps = 154/815 (18%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V +L D L +Y L E + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSRL--------DELGKYKQLRETIGNIPNLRVIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEQSLSNAFQERIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A P +S++ +S + +
Sbjct: 248 IL-LRIAELLRNNKDDILIIGEKVMYLDILNAKSIYANENRCEIPTVSNREILSLEKA-- 304
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+HP + D VP+ ++ +
Sbjct: 305 ----RHPFI-----------------------------------DKDKVVPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R L+ + +L E
Sbjct: 506 RAYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564
Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKVNFKV------------GDRVFVKSI-NQ 648
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
A ++++ ++ +VQ G +++ V P ++ +E ++
Sbjct: 649 FANILKINTSKESAMVQAGILKLEV------------------PFDEIKVVEEKKEKVYN 690
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
+++++ ++ +DLRG V+EA ++L+ L A + ++VIHG GTG +
Sbjct: 691 MNTHKKTPV-------RSEIDLRGKMVDEAVYELETYLDRATLNGYTEVYVIHGKGTGAL 743
Query: 803 KERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+E +L+ L+ V +Y GCTV +K
Sbjct: 744 REGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|383788670|ref|YP_005473239.1| MutS2 protein [Caldisericum exile AZM16c01]
gi|381364307|dbj|BAL81136.1| MutS2 protein [Caldisericum exile AZM16c01]
Length = 782
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 228/837 (27%), Positives = 392/837 (46%), Gaps = 101/837 (12%)
Query: 11 IPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIE--DIAGILNSAVSGQLLSPSEICAV 68
+P+ +S EE+ L +T+ A ++ + DL IE D+ + L++P EI V
Sbjct: 35 LPY-ESFEETTVALKETTDAKKFLEKEG-DLPFIEFIDVEPLFEKIKVLSLVTPEEILRV 92
Query: 69 RRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIG-----FCIDCK 123
L A +E E+ G+S + P E+ K L+ E+ + D K
Sbjct: 93 SDVLSA-------FSEIKEI-GESYRETYP--EVFKYIMKLSNFEDIVKAIRKVVGNDGK 142
Query: 124 LLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIK 183
I+D AS L +IR E K + S+L+++ I +ITKR R + I+
Sbjct: 143 ---IVDDASPLLSIIRREIKTTYLRIQSILQEILYSRENEDAIQDKIITKRNDRYVIPIR 199
Query: 184 ASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAK 243
+ K + + S S T F+EP VE NN V L + E EE I+ L I
Sbjct: 200 LNSKPSF-NYVVQGESGSKLTLFVEPMAVVELNNKLVDLFSKERREEERIVLELEERIRN 258
Query: 244 SEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGS 303
++ ++ + ++D FA+A + PIL ++ ++ +
Sbjct: 259 KFSAVEESLNIIYKLDFIFAKARLSLEFKASEPILVNEPYLELYEA-------------- 304
Query: 304 SLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGG 363
NP +D D VPIDI+V ++++ITGPNTGG
Sbjct: 305 -----------RNPFIND----------------DVVVPIDIEVGKNFKMLIITGPNTGG 337
Query: 364 KTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIV 423
KT ++KT GL +LM+KAG+++PA ++ + +F + ADIGD QS+EQNLSTFS H+ RI+
Sbjct: 338 KTVTLKTTGLLTLMAKAGMHIPAISNSTVGFFRDVFADIGDEQSIEQNLSTFSSHMVRII 397
Query: 424 DILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKD 483
DIL+ +++ LVLIDE+G+GTDP EG +L +IL+ L ++VTTH+ + K
Sbjct: 398 DILKNATKDDLVLIDELGAGTDPEEGASLGFAILKRLYKIGASSIVTTHHGKIKEFPYKF 457
Query: 484 TRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQ 543
+NA+ F ++TL PTY++ G G+S+AL IA+ +G ++ A R
Sbjct: 458 KEAQNASVGFDVDTLSPTYKLYIGIPGESHALIIAERLGMPEDVLSDA-----RSELSSD 512
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
K+E+ + E+ R +E R E M L E + K+L+ R K ++
Sbjct: 513 FIEKAEIVSKMHEDNRAIEIMKRDTEVAKNEAMRLKETYEQKLKELEERKRLEIRKAYEE 572
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
Q+ ++ K +++ ++++ + ++ I+E + A+ + + + + E
Sbjct: 573 AQRIIDETKEKMNKILENLDVSIKSQKE------IQEMKKALKSEEQKIEEQQEKTFEEV 626
Query: 664 NTSSFTP-QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
N + + G V+V++L + V++V D+ +VQ G +R +K +++ P+ K
Sbjct: 627 NKVGPSEIKEGILVYVRTLKAQ-GIVLQVKNDEQKAIVQMGAIRATLKFSDLEPVSEEKV 685
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL 782
+ P + +DL G V++A LD L
Sbjct: 686 EVKK--------------EKRGELKELFEEELPMM------IDLHGYTVDDAIDILDKYL 725
Query: 783 --ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
A ++++HG GTG ++E +L+ LRN+ R+A++E +P G T+ + +
Sbjct: 726 DKAYLHGLPHVYIVHGKGTGALREAILQYLRNNKRIARFETGTPSEGGIGTTIVFFR 782
>gi|375090529|ref|ZP_09736843.1| MutS2 family protein [Facklamia languida CCUG 37842]
gi|374565290|gb|EHR36561.1| MutS2 family protein [Facklamia languida CCUG 37842]
Length = 786
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 221/712 (31%), Positives = 333/712 (46%), Gaps = 123/712 (17%)
Query: 149 LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFME 208
L+ LL+ A+Q+ A LIT R R + +KA + G + SS+G T ++E
Sbjct: 173 LNQLLRSKASQLSDA------LITIRNDRFVLPVKAEFRGQF-GGTVHDQSSTGQTLYVE 225
Query: 209 PKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFA 268
P+ V NN L+ E AE IL L+ + EI+ + ++D A+A +A
Sbjct: 226 PQAVVALNNKLADLAAQEKAEIERILEELSMALVPYVSEIRQNERMIAQLDFIQAKAAYA 285
Query: 269 QWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMT 328
+ P S D I + +HPL+ +P
Sbjct: 286 KANQATKPSFSE------DQQIALWQARHPLI---------------DP----------- 313
Query: 329 VGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKN 388
D V DI + +++VITGPNTGGKT +KTLGL +M ++GL++P +
Sbjct: 314 ---------DKIVANDILIGDSYQLLVITGPNTGGKTIILKTLGLVQVMGQSGLFVPCEA 364
Query: 389 HPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSE 448
+L F+ I ADIGD QS+EQ+LSTFS H++ IV I+E SLVL DE+GSGTDP E
Sbjct: 365 GSQLGVFEGIYADIGDEQSIEQSLSTFSSHMTNIVKIIEASHESSLVLFDELGSGTDPQE 424
Query: 449 GVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWG 507
G ALA +IL YLR +VG V+ TTHY +L + + NA+ EF E+L PTYR+L G
Sbjct: 425 GAALAMAILDYLR-KVGATVMATTHYPELKVYAHETPKTVNASMEFDSESLSPTYRLLIG 483
Query: 508 STGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQART 567
G SNA +I+K +G I+ A++ + S+ QSL E KLE + R
Sbjct: 484 VPGRSNAFDISKRLGLREDILADARQGI------------SKESQSLNEMVAKLERERRQ 531
Query: 568 AASLHAEIMDLYREIEDEAKDLDR-------RAAHLKAKETQQVQQELNFAKVQIDTVVQ 620
+ HA ++ E KDL + L K +Q +++ A+ + + ++Q
Sbjct: 532 SELKHASAVEFLNRSEQLLKDLRTEYNRYLDQKEDLMEKAKRQANEKVAEAQKEAEKLLQ 591
Query: 621 DFEN-QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQ-------- 671
+ + QL N IKE +++ + D +E + +
Sbjct: 592 EIRDLQLVQGQ----NQTIKEH-----VLIDKKQAFDQLKEAENLKKNKVLKKAKKAQGF 642
Query: 672 -FGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK---NNIRPIPNSKRKNAAN 727
G+QV V S + V +V ++ LVQ G ++++ N I P+ +SK
Sbjct: 643 AVGDQVEVLSYQQRGVVVEQVAKNE--YLVQMGILKMKFPAEELNAIAPVQSSKH----- 695
Query: 728 PAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACW 785
R+ Q R++GS S+ SLDLRG R + A L L A
Sbjct: 696 ---RVNVQ---RRAGSKVST---------------SLDLRGQRYDAAMQGLTQYLDQALL 734
Query: 786 ESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
+ ++ +IHG GTG +++ V + L +HP+V YE +P G TV Y K
Sbjct: 735 SNHPMVTIIHGKGTGALRKGVQKKLESHPQVDHYEFSAPNAGGDGSTVVYFK 786
>gi|418028172|ref|ZP_12666754.1| MutS [Streptococcus thermophilus CNCM I-1630]
gi|354687972|gb|EHE88023.1| MutS [Streptococcus thermophilus CNCM I-1630]
Length = 783
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 348/722 (48%), Gaps = 104/722 (14%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 241
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 542 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 596
+R E L +E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKATRAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMSLKADEFTL 675
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RTQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 777 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 832
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 833 YI 834
+
Sbjct: 781 TL 782
>gi|194017274|ref|ZP_03055886.1| recombination and DNA strand exchange inhibitor protein MutS2
[Bacillus pumilus ATCC 7061]
gi|194011142|gb|EDW20712.1| recombination and DNA strand exchange inhibitor protein MutS2
[Bacillus pumilus ATCC 7061]
Length = 786
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 241/839 (28%), Positives = 398/839 (47%), Gaps = 113/839 (13%)
Query: 17 LEESQKLLNQTSAA---LAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLR 73
+E Q LL + A + + S P + DI + A G LSPSE+ + L
Sbjct: 41 IETIQHLLEEVEEAQDVIRLKGSAPF--GGLTDIRRAVKRAEIGSTLSPSELMEIAGLLY 98
Query: 74 AVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASE 133
AV N+ LT E DG + R E L L E+ ++I CI + LD A+
Sbjct: 99 AVKNMKHFLTSMYE-DGVDIPRLHTYAETL---ILLPEIRKEIESCIGDNGEV-LDHATP 153
Query: 134 DLELIRAERKRNMEN-----LDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKY 188
L +R + R++E+ L+S+++ +A + ++T R R + +K ++
Sbjct: 154 ALRSLRIQL-RSLESKVRDKLESMIRSQSASKM----LSDTIVTIRNDRFVIPVKQEYRS 208
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
GI + SSSGAT F+EP+ V+ NN + E E IL +LT +++ E+
Sbjct: 209 NY-GGIVHDQSSSGATLFIEPQVVVDVNNTLQQTRLKEKQEVEKILQMLTESVSEHIGEL 267
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ + + +D FA+A +A+ P ++ Q + + +HPLL
Sbjct: 268 LHNVKELQTLDFIFAKAKYAKTEKATKPAVNDQGEIYLKRA------RHPLL-------- 313
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
P V N DI++ + +VITGPNTGGKT ++
Sbjct: 314 --------PRDQVVAN-------------------DIELGKDFSTIVITGPNTGGKTVTL 346
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGL +LM++AGL++P + + FD + ADIGD QS+EQ+LSTFS H+ IVDIL+
Sbjct: 347 KTLGLLTLMTQAGLHIPVEEGSEVAVFDQVFADIGDEQSIEQSLSTFSSHMVNIVDILKH 406
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
++ SLVL DE+G+GTDP+EG ALA SIL + + TTHY +L N
Sbjct: 407 LTSNSLVLFDELGAGTDPAEGAALAMSILDEVHQTNARVIATTHYPELKAYGYNREGVTN 466
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF +ETL PTYR+L G G SNA I+K +G +I RA+ + E Q
Sbjct: 467 ASVEFDIETLSPTYRLLIGVPGRSNAFEISKRLGLPDHLIDRAKADMHAEHNEVDQ---- 522
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
+ SL + +++ E + E L++E++ + + + + L + Q+ ++++
Sbjct: 523 -MIASLEDSKKQAEEELHETEVYRKEAEKLHKELQRQILEWNEQKDKLLEEAEQKAKEKI 581
Query: 609 NFAKVQIDTVVQDF---ENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNT 665
A + + ++Q+ +++ R E+ K E A+ P+ D
Sbjct: 582 EQASKEAEDIIQELRSIKSEHRSFKEHELIDARKRLEEAV--------PEFDRKKKPEPA 633
Query: 666 SSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
Q G++V V + G K T++E GD + VQ G ++++VK+ ++ I +
Sbjct: 634 KKAVRQLKSGDEVKVLTFGQK-GTLLEQTGDKEWS-VQIGILKMKVKEKDMEFIKS---- 687
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL----- 778
AP ++++ A ++ + Y ++ LDLRG R E A ++
Sbjct: 688 -----APEFKQEK-------AITAVKGKDYHVSLE-----LDLRGERYENALSRVEKYLD 730
Query: 779 DIALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV--AKYEQESPMNYGCTVAYIK 835
D LA + S +IHG GTG +++ V E+L+ H V A++ ++ G T+ +K
Sbjct: 731 DAVLAGYPRVS---IIHGKGTGALRKGVQELLKQHRSVKNARFGEQGEGGSGVTIVELK 786
>gi|315037655|ref|YP_004031223.1| DNA mismatch repair protein MutS2 [Lactobacillus amylovorus GRL
1112]
gi|312275788|gb|ADQ58428.1| DNA mismatch repair protein MutS2 [Lactobacillus amylovorus GRL
1112]
Length = 785
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 343/728 (47%), Gaps = 112/728 (15%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
+LD AS L +R + N E + K + G K L +T R R + +
Sbjct: 146 VLDTASSALARLRHDIASNEEEI-----KDKMNAYTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ +A
Sbjct: 201 KQEYRAKFG-GVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLSG-LA 258
Query: 243 KSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
+ E + + + + +D A+A A+ M PIL+ D SIN+ +HPL+
Sbjct: 259 REEIDSLNNIATALTRLDFLQAKAKLAKNMKASEPILTK------DHSINLRNARHPLI- 311
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
+P K VP DI++ + ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGDDFDTMLITGPNT 337
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT GL LM+++GL++PA+ ++ F+ + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFEEVYADIGDEQSIEQSLSTFSSHIND 397
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV I++ V++E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IVAIMKNVNKETLVLIDEIGAGTDPEEGASLAISILDFLRQKDAKIMVTTHYPELKLYGY 457
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARRLGMREDVVKNAQNLM------ 511
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
S+ + + KL +Q + A S + D ++ L+++
Sbjct: 512 ------SDEDSDINKMISKLNAQTKAATSARNRLETSL----DRSQKLEQKLQQALDWYN 561
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADE-INSLIKESESAIA--AIVEAHRPDDDF 658
Q+VQ++L+F + + + ++ R AD+ I L K+ + + I+EA ++
Sbjct: 562 QRVQKQLDFTQERANEIIAK-----RRKKADQIIEQLEKQKNAGVKENKIIEAKGELNNL 616
Query: 659 SVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYGKMRVR 708
N + + Q ++ H S+GD++ + G T+ VQ G ++V+
Sbjct: 617 ERQANNLAHNKVLQREKRRHHVSVGDRVKVLSY--GQTGTITKKLSEHEYEVQMGIIKVK 674
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
V +I I ++ + P +R A+ R + + LDLRG
Sbjct: 675 VSDRDIERI---EKNESTKPKHLVR-----------------ATSAVRRSNAHSELDLRG 714
Query: 769 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMN 826
R +EA LD I + +IHG+GTG +++ V + LRN V + +P N
Sbjct: 715 QRYDEAMTNLDRYIDSVLLAGLGTVTIIHGIGTGAIRKGVWQYLRNSRHVKSFNY-APAN 773
Query: 827 YGCTVAYI 834
G A I
Sbjct: 774 EGGNGATI 781
>gi|315924184|ref|ZP_07920410.1| DNA mismatch repair protein MutS [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315622586|gb|EFV02541.1| DNA mismatch repair protein MutS [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 793
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 240/842 (28%), Positives = 387/842 (45%), Gaps = 118/842 (14%)
Query: 17 LEESQKLLNQTSAALAM-MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
LEE+ L+ T A M +++ ++ + +I ++ A G LS ++ + +LR V
Sbjct: 40 LEEADIWLDWTDEATGMILRNGRAPMAALCNIPEYVHRAEIGSTLSMRQLLEIASSLRVV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASED 134
++ E E ++L R + L C L E+ +KI I K + DRAS
Sbjct: 100 RDMQAYFDEDPE--QEALNRLHNDFDALDPCADLEAEISKKI---IGPKEMS--DRASRA 152
Query: 135 LELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGI 194
L IR E + L ++ + + + +IT R +R V +K ++ +P GI
Sbjct: 153 LNQIRKEITAKNAQITDKLNRIISSSANEKVLQERIITVRNNRYAVPVKQEYRNQIP-GI 211
Query: 195 ALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDR 254
L+ S++GAT F+EP V+ NN LS E E IL LT +IA + + D
Sbjct: 212 VLDKSATGATLFIEPAAVVQLNNELKILSVEEEKEIARILKALTEKIAAYKMVLIADYDV 271
Query: 255 VLEIDLAFARAGFAQWMDGVCPILSSQSHVSF----DSSINIEGIKHPLLLGSSLRSLSA 310
++ +D FA+A + GV V+F ++ + + +HPLL
Sbjct: 272 LVHLDFVFAKAAYGLNTGGV--------RVAFKDDRENVLQLLRARHPLL---------- 313
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
+P ++ V DI V + +VITGPNTGGKT ++KT
Sbjct: 314 -----DPRQA--------------------VASDIAVSKDIHTIVITGPNTGGKTVTLKT 348
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
+GL S+M ++GL++PA+ F + ADIGD QS+EQ+LSTFS H+ V+ ++
Sbjct: 349 IGLLSVMIQSGLFVPAREGSYTRCFREVFADIGDEQSIEQSLSTFSAHMKNTVNFIDKAQ 408
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
++ LVL DE+G+GTDP+EG ALA S+L+ L R V TTHY++L + NA+
Sbjct: 409 KDDLVLFDELGAGTDPTEGAALAISLLEVLHARGVTTVATTHYSELKEYALTTSGIVNAS 468
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF +ETL+PTYR+L G G SNA IA+ +G +II RA+ V +++
Sbjct: 469 VEFDVETLQPTYRLLIGIPGKSNAFEIAQKLGLKPEIIARARAYVS---------KEASR 519
Query: 551 YQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNF 610
++ ++ LES+ R E E +++ ++ + A LKA TQ+ LN
Sbjct: 520 FEDTLD---VLESKRREMERRLEEAERKELEAQEKTAQIEEQMAALKA--TQETI--LNE 572
Query: 611 AKVQIDTVV-----------------QDFENQLRDASADEINSLIKESESAIAAIVEAHR 653
A+ + D +V Q+ NQ D + SL K+ +A R
Sbjct: 573 ARAKADALVTQTQQKTEAIYREIREIQEHTNQQIDNK--RLESLRKQMHNAHQRAGAEKR 630
Query: 654 PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNN 713
+ + P G V++++ K V+EV VLVQ G M+++V +
Sbjct: 631 KKQKPQKQRLDVQTLKP--GMTVYLENF-HKEGEVLEVKPGTHQVLVQVGPMKIKVGEKE 687
Query: 714 IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEE 773
+ + + + P+ + + DR + LDLRG EE
Sbjct: 688 LSVLTHYGKALDKKATPK-KTKSFDRHA------------------MNTRLDLRGRTAEE 728
Query: 774 ASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMNYGC 829
A + ++ L A + S L ++HG GTGV++ V + L+ N R ++ S G
Sbjct: 729 AVYMVEKFLSDAVVANASQLTIVHGKGTGVLQRVVQDYLKKSNMVRTFRFGNPSEGGTGA 788
Query: 830 TV 831
T+
Sbjct: 789 TI 790
>gi|157150407|ref|YP_001449579.1| DNA mismatch binding protein MutS2 [Streptococcus gordonii str.
Challis substr. CH1]
gi|229486382|sp|A8AUW9.1|MUTS2_STRGC RecName: Full=MutS2 protein
gi|157075201|gb|ABV09884.1| DNA mismatch binding protein MutS2 [Streptococcus gordonii str.
Challis substr. CH1]
Length = 777
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 217/716 (30%), Positives = 344/716 (48%), Gaps = 101/716 (14%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
ASE+L IR + + N + LL+++ + + ++ R R + +K +++ +
Sbjct: 147 ASEELGRIRRKIQENESKVRDLLQEILKN--KGDMLADQVVASRNGRNVLPVKNTYRNRI 204
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
P G+ ++S+SG T ++EP+ V N E E IL L+A I EI
Sbjct: 205 P-GVVHDISASGTTIYIEPRAVVNLNEEISNYKADERYELLRILQELSAMIRPHAAEIAN 263
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ +DL A+ F + V P +S +I + ++HPL
Sbjct: 264 NAWIIGHLDLVMAKLAFMRERGAVVPAISDTQ------AIQLLQVRHPL----------- 306
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
++N+ V D+ + +VITGPNTGGKT +KT
Sbjct: 307 -----------IQNA---------------VANDLHFGPDLTEIVITGPNTGGKTIMLKT 340
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGLA +M+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV ILE V
Sbjct: 341 LGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNIVSILEQVD 400
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
ESLVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L + ENA+
Sbjct: 401 SESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGIETDWVENAS 460
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSEL 550
EF ++LRPTYR + G G SNA IA+ +G I+ AQ+ Q + S++
Sbjct: 461 MEFDTDSLRPTYRFMQGVPGRSNAFEIARRLGLSEVIVSHAQE---------QTNTDSDV 511
Query: 551 YQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELN 609
Q + E + LES+ R +D RE+E E +R L + ++ + ELN
Sbjct: 512 NQIIERLEEQTLESRKR---------LDNIREVEQENLKFNRALKKLYNEFNREKETELN 562
Query: 610 FAKVQ----IDTVVQDFENQLRDASADEINSLIKESE--SAIAAIVEAHRPDDDFS---V 660
A+++ +D + + E+ L++ A S +K E A A + + D S V
Sbjct: 563 KARLEAQEIVDLALSESESILKNLHA---KSSLKPHEIIEAKAQLKKLAPETVDLSKNKV 619
Query: 661 SETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNS 720
+ + P+ G+ + V S G + T+V++ D Q G +++ +++ +
Sbjct: 620 LKQAKKNRAPKVGDDILVTSYGQR-GTLVKLL-KDGRWEAQVGLIKMTLEEQEFNLLKAE 677
Query: 721 KRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD- 779
K +Q + +Q +N + GPR + LDLRG R EEA +LD
Sbjct: 678 K-----------EQQPKRKQVNVVKRAN---TAGPRAR-----LDLRGKRYEEAMKELDE 718
Query: 780 -IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
I A + + + +IHG+GTGV++E V + LR + V + +P N G + A I
Sbjct: 719 FIDQALLNNMAQVDIIHGIGTGVIREGVNKYLRRNKHVKSFGY-APQNAGGSGATI 773
>gi|345017977|ref|YP_004820330.1| MutS2 protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033320|gb|AEM79046.1| MutS2 protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 791
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 233/835 (27%), Positives = 397/835 (47%), Gaps = 118/835 (14%)
Query: 7 QKA-QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEI 65
QKA I K +EE ++ L+ + A++ + S EDI + A +L E+
Sbjct: 33 QKASNIVIKKDIEEIERELDLLNEAISFISSYGGISFAFEDIRDYIKKAQIDSVLYNQEL 92
Query: 66 CAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLL 125
+++ L V+ + E D R+ L E K + +LE++I I +
Sbjct: 93 LKIKKFLNLVSQIKGYFKNLQESD-----RFVRLKEYDKKVLPIKDLEKRIENIIISEDE 147
Query: 126 IILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKAS 185
I D AS L+ +R ++ E + + L + + + + +P+IT R+ R V +K
Sbjct: 148 I-ADDASPMLKSLRRQKSSINEKIRATLNSIIST--RQKELQEPIITVRQGRYVVPVKQE 204
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
++ GI + SSSGAT F+EP V+ NN ++ E E IL L+ E+ K
Sbjct: 205 YRSTFK-GIVHDQSSSGATLFIEPMQVVDLNNELRQVELKERQEIQRILLELSQEVKKYS 263
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
+ + ++ V ++D FA+A ++ + V P L++ + IN++ +HPL+
Sbjct: 264 QILFDDIEIVSDLDFIFAKAKYSLKLKAVRPELNTMGY------INLKKARHPLI----- 312
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
N E+ V PIDI + + +VITGPNTGGKT
Sbjct: 313 ------------------NQEVIV------------PIDIYIGDQFNTLVITGPNTGGKT 342
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
++KT+GL +LM+ AGL +PA+ ++ F+ + DIGD QS+EQ+LSTFS H++ IV I
Sbjct: 343 VTLKTVGLLTLMAMAGLNIPAEERSQVSIFEEVFVDIGDEQSIEQSLSTFSSHMTNIVSI 402
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L+ V++ LVL+DE+G+GTDP EG ALA SIL L + TTHY++L K
Sbjct: 403 LQKVNKNCLVLLDELGAGTDPIEGAALAMSILDTLHKIGAKTIATTHYSELKQYALKAPG 462
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLV--ERLRPERQ 543
ENA+ EF +ETL+PTY+++ G G SNA I+K +G ++II+ A+K + E L+ E
Sbjct: 463 VENASVEFDVETLKPTYKLIIGLPGKSNAFEISKRLGLPQQIIENARKYISGEALKFE-- 520
Query: 544 QHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYR--------------EIEDEAKDL 589
++ + +RR+LE + A L ++ L +I EAK+
Sbjct: 521 -----DIIADVESKRRELEKANQEIAFLKKDVEILKEELEKEKKKLQSERDKILKEAKEK 575
Query: 590 DRRA---AHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIA 646
R+ A A+E + +E + D ++Q+ +L+ + ++K E+ +
Sbjct: 576 ARKIIQEAKFTAEEIIKKIKEAKESTQNKDRIIQEVREELKKNLEELEEEVLKPKEAHYS 635
Query: 647 AIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMR 706
I PD+ + E T P D+ V+ +P V +Q G ++
Sbjct: 636 RI-----PDN---LKEGQTVYIVPL-----------DQNGIVLSLPDKSGNVEIQAGILK 676
Query: 707 VRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDL 766
+ V +N+R + + G + +E++ Q+ S+D+
Sbjct: 677 MTVHISNLRVAEEKEDEEVK--------------KGYSKFVHEKS------QSISTSIDV 716
Query: 767 RGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
RG +++A +++ I A + +IHG GTGV++ + + LR++ V +
Sbjct: 717 RGKNLDDALLEVEKYIDDAYLAGLKEVTIIHGRGTGVLRTGISQFLRSNKHVKSF 771
>gi|170289322|ref|YP_001739560.1| MutS2 family protein [Thermotoga sp. RQ2]
gi|238688758|sp|B1LC69.1|MUTS2_THESQ RecName: Full=MutS2 protein
gi|170176825|gb|ACB09877.1| MutS2 family protein [Thermotoga sp. RQ2]
Length = 757
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 232/800 (29%), Positives = 356/800 (44%), Gaps = 110/800 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
+ + DI+ + SG L P E+ V L + + KK E E YS L
Sbjct: 60 IKGLNDISQEVERVKSGSALEPWELLRVSVFLEGCD-ILKKDFEKRE--------YSRLK 110
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
E + + E++ CI+ I DRAS L IR E+KR L S +K+ A
Sbjct: 111 ETFSRLSSFRDFVEEVNRCIEQDGEIS-DRASPRLREIRTEKKR----LASEIKRKADDF 165
Query: 161 FQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ + + + R R +KAS + + GI ++SSSGAT F+EP VE NN
Sbjct: 166 VRTHSQILQEQMYVYRDGRYLFPVKASMRNAV-RGIVHHLSSSGATVFLEPDEFVELNNR 224
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L E E + IL LT + +++ ++ + D +AR FA+ +G
Sbjct: 225 VRLLEEEERLEISRILRQLTNILLSRLNDLERNVELIARFDSLYARVKFAREFNGTV--- 281
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
V S I + +HPL+ +
Sbjct: 282 -----VKPSSRIRLVNARHPLIPKERV--------------------------------- 303
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VPI++++ R +ITGPN GGKT ++KT+GL + + +G LP L F I
Sbjct: 304 --VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPKI 361
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
+ADIG+ QS+EQ+LSTFS H+ +IV+I++ +SLV++DE+GSGTDP EG ALA +I++
Sbjct: 362 MADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAVAIIE 421
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
L ++ VTTH + NA+ EF ETL PTYR+L G G S+A IA
Sbjct: 422 DLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSHAFQIA 481
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
+ +G D++II+ A R R R++ L +SL E+ LE + R E M L
Sbjct: 482 EKLGLDKRIIENA-----RSRLSREEMELEGLIRSLHEKISLLEEEKRKLQKEREEYMKL 536
Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
+ E++ K L R KE +++ + K ++D + + + S DE+ +
Sbjct: 537 REKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAI----HVAKTGSVDEMREAV 592
Query: 639 KESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
K +E + D + + E P G+ V ++ G + VVEV T
Sbjct: 593 K--------TIEKEKKDLEQKRIEEATEEEIKP--GDHVKMEG-GTSVGKVVEV--KSGT 639
Query: 698 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 757
LV +G +R++V P+ K+ + SY P
Sbjct: 640 ALVDFGFLRLKV------PVSKLKKAKKE-----------------EKEESSAVSYRP-- 674
Query: 758 QTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
+ + +D+RGM VEEA + I S ++IHG GTG + V EILR R
Sbjct: 675 SSFRTEIDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEILRKDKR 734
Query: 816 VAKYEQESPMNYGCTVAYIK 835
V + +P G V ++
Sbjct: 735 VVSFRFGTPSEGGTGVTVVE 754
>gi|260495808|ref|ZP_05815929.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_33]
gi|260196655|gb|EEW94181.1| DNA mismatch repair protein MutS [Fusobacterium sp. 3_1_33]
Length = 778
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 220/815 (26%), Positives = 386/815 (47%), Gaps = 154/815 (18%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G L E+ + LR V KL D L +Y L E + N L +E+ I
Sbjct: 82 GTYLEVEELWDINVNLRTVRIFKSKL--------DELGKYKQLRETIGNIPNLRLIEDVI 133
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQ----AGGIDKPLIT 172
I+ + I D AS DL IR +K L+ +K+ ++F+ + + +IT
Sbjct: 134 NKTINPEKEI-KDDASLDLRDIRLHKK----TLNMNIKRKFEELFEEPSLSNAFQERIIT 188
Query: 173 KRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETA 232
+R RM +K K L+ GI + SSSG T F+EP V NN L E E
Sbjct: 189 ERDGRMVTPVKYDFKGLIK-GIEHDRSSSGQTVFIEPLSIVSLNNKMRELETKEKEEIRK 247
Query: 233 ILSLLTAEIAKSERE-IKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSIN 291
IL L AE+ ++ ++ I + ++V+ +D+ A++ +A P +S++ +S + +
Sbjct: 248 IL-LRIAELLRNNKDDILTIGEKVMYLDILNAKSIYANENRCEIPTVSNREILSLEKA-- 304
Query: 292 IEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECET 351
+HP + D E VP+ ++ +
Sbjct: 305 ----RHPFI--------------------DKEKV---------------VPLTFEIGKDY 325
Query: 352 RVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQN 411
+++ITGPNTGGKT ++KT GL +LM+ +G+ +PA + ++ +F+ + ADIGD QS+EQ+
Sbjct: 326 DILLITGPNTGGKTVALKTAGLLTLMALSGIPIPASENSKIGFFEGVFADIGDEQSIEQS 385
Query: 412 LSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTT 471
LS+FS H+ + +ILE V++ SLVL+DE+GSGTDP EG A A +++ YL ++ + +TT
Sbjct: 386 LSSFSAHLKNVKEILEAVTKNSLVLLDELGSGTDPIEGAAFAMAVIDYLNEKKCKSFITT 445
Query: 472 HYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA 531
HY+ + + E A+ EF+ +TL PTYR+L G G+SNAL IA+ +G II +A
Sbjct: 446 HYSQVKAYGYNEEGIETASMEFNTDTLSPTYRLLVGIPGESNALTIAQRMGLPESIISKA 505
Query: 532 -----------QKLVERLRPERQQ-HRKSELYQSLMEERRKLESQARTAASLHAE----- 574
+K++E ++ + Q+ E + L EE R L+ + +L E
Sbjct: 506 REYISEDNKKVEKMIENIKTKSQELDEMRERFARLQEEAR-LDRERAKQETLIIEKQKNE 564
Query: 575 -IMDLYREIEDEAKDLDRRAAHLKAK---------ETQQVQQELNFAKVQIDTVVQDFEN 624
I Y E E ++ +A+ L K + +Q+Q+ LN
Sbjct: 565 IIKSAYEEAEKMMNEMRAKASALVEKIQHEEKNKEDAKQIQKNLNM-------------- 610
Query: 625 QLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDK 684
+++ ++E ++ +V+ + +F V G++V VKS+ ++
Sbjct: 611 ---------LSTALREEKNKTVEVVKKIKTKINFKV------------GDRVFVKSI-NQ 648
Query: 685 LATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSA 744
A ++++ ++ +VQ G +++ V P ++ +E ++
Sbjct: 649 FANILKINTSKESAMVQAGILKLEV------------------PFDEIKVVEEKKEKVYN 690
Query: 745 GSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVV 802
+++++ ++ +DLRG V+EA ++L+ L A + +++IHG GTG +
Sbjct: 691 MNTHKKTPV-------RSEIDLRGKMVDEAVYELETYLDRATLNGYTEVYIIHGKGTGAL 743
Query: 803 KERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
+E +L+ L+ V +Y GCTV +K
Sbjct: 744 REGILKYLKTCKYVKEYRIGGHGEGGLGCTVVTLK 778
>gi|421895098|ref|ZP_16325576.1| MutS2 family protein [Pediococcus pentosaceus IE-3]
gi|385272018|emb|CCG90948.1| MutS2 family protein [Pediococcus pentosaceus IE-3]
Length = 785
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 227/806 (28%), Positives = 389/806 (48%), Gaps = 126/806 (15%)
Query: 51 LNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLT 110
+++A++GQ L+ +I + R R V N + L E E++ +L ++++ +
Sbjct: 80 IDAALNGQELA--QIGRILRATRTVINFFDDL-ENEEIEIIALD------QVIEQLVTIP 130
Query: 111 ELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG----I 166
E+EE++ I+ + L+ AS +L IRA R ++ S ++K F G +
Sbjct: 131 EVEERLSNSIEGNGHL-LNSASSELRRIRASITRIESDVRSRMEK-----FTRGNNVKYL 184
Query: 167 DKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN-S 225
+P++T R R + ++ ++ G+ + SSSG T ++EP+ V+ NN E+R + +
Sbjct: 185 SEPIVTIRNERYVIPVRVEYRSKFG-GVVHDQSSSGQTLYVEPESVVDLNN-ELRQNQVA 242
Query: 226 EIAEETAILSLLTAEIAKSEREIKYLMDRVL-EIDLAFARAGFAQWMDGVCPILSSQSHV 284
E+ EE IL L+A +A +K R+L +DL A+A +A + P +
Sbjct: 243 EVHEEQRILQELSALVAPYTYTLKD-NSRILGHLDLLNAKAQYAHQLKATEP------QI 295
Query: 285 SFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPID 344
S + IN+ +HPL+ K V N D
Sbjct: 296 SASNEINLREARHPLI----------------DQKKVVSN-------------------D 320
Query: 345 IKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGD 404
I++ E +VITGPNTGGKT ++KT+GL LM+++G+++PA + + F+ I ADIGD
Sbjct: 321 IRLGGEYETLVITGPNTGGKTITLKTVGLLQLMAQSGMFIPANENSTVRIFEEIFADIGD 380
Query: 405 HQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRV 464
QS+EQNLSTFS H+ + IL ++ SL L DE+G+GTDP EG ALA +IL +R
Sbjct: 381 EQSIEQNLSTFSSHMDNTIRILGNLNERSLALFDELGAGTDPKEGAALAIAILDKVRSTG 440
Query: 465 GLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFD 524
+++ TTHY +L + NA+ EF ++TL+PTY++L G G SNA I+K +G D
Sbjct: 441 AVSMTTTHYPELKTYGYERMGTINASMEFDVDTLQPTYKLLLGIPGQSNAFEISKRLGLD 500
Query: 525 RKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIED 584
II +A+ LV+ + Q L + L ++ + A ++ + ++L ++ E+
Sbjct: 501 SDIISQARGLVD------------QDSQDLNNMIKDLTTRQKRAQKINQQAVELLKQAEE 548
Query: 585 EAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESA 644
+ L + L ++ + ++ AK + +V D + A AD I +++ E +
Sbjct: 549 YHQTLVKGVDSLNSQRSNLIES----AKEDANRIVNDSQ-----AEADRIIKRLRKLEHS 599
Query: 645 IAAIVEAHRPDDDFSVS----ETN--------TSSFTPQFGE--QVHVKSLGDKLATVVE 690
+ E D ++ +TN + +F E +V V + G + + +
Sbjct: 600 TGSFKENDLIDAKSKINALHQDTNLKRNKVLRRAKEAQKFHENDEVVVLTYGQRGELLRQ 659
Query: 691 VPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEE 750
V D VQ G M+++V + + + K + R +++ SAG
Sbjct: 660 V--DKKHWEVQMGIMKMKVAVDELEKVKPDK-------TVKRRVHNSVQRTASAG----- 705
Query: 751 ASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLE 808
K +LDLRG R EEA + D I A + ++HG GTG ++ + +
Sbjct: 706 ---------VKTTLDLRGKRYEEALTETDRYIDAALLAGYDEVTIVHGKGTGALRSGITK 756
Query: 809 ILRNHPRVAKYEQESPMNYGCTVAYI 834
L+N+ R+ +E +P N G A I
Sbjct: 757 YLKNNRRIKAFEY-APANAGGNGATI 781
>gi|291562931|emb|CBL41747.1| MutS2 family protein [butyrate-producing bacterium SS3/4]
Length = 798
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 239/806 (29%), Positives = 367/806 (45%), Gaps = 103/806 (12%)
Query: 35 QSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTL----RAVNNVWKKLTEAAELDG 90
Q L L+ + D+ L G LS +E+ +V L RA N + + E EL
Sbjct: 59 QKGSLSLAGVRDVRDSLKRLEIGSSLSITELLSVSGLLTCAARAKN--YGRHPENMELPD 116
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNME--- 147
DSL LE L N N +I CI + I D AS L +R + K +
Sbjct: 117 DSLDEMFRTLEPLTNVN------SEITRCILGEDEIA-DDASPGLHHVRRQMKITADKVH 169
Query: 148 -NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYF 206
L+S+L + A +IT R R C+ ++A +K G+ + S++G+T F
Sbjct: 170 TQLNSILNSSRTMLQDA------VITMRDGRYCLPVRAEYKSQFA-GMVHDQSATGSTLF 222
Query: 207 MEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAG 266
+EP ++ NN L E E IL+ L+ E+ I + + ++D FA+A
Sbjct: 223 IEPMAIIKLNNELRELELKEQKEIEMILAALSTELVPYIEPITTDFEILTKLDFIFAKAA 282
Query: 267 FAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSE 326
++ + P + + + I+I+ +HPLL +P K
Sbjct: 283 LSRIYNCSMPKFNRKGY------IHIKDGRHPLL---------------DPKKV------ 315
Query: 327 MTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPA 386
VPI+I + + ++++TGPNTGGKT S+KT+GL +LM ++GL +PA
Sbjct: 316 --------------VPINIWMGKDFDLLIVTGPNTGGKTVSLKTVGLFTLMGQSGLQIPA 361
Query: 387 KNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDP 446
+ L FD + ADIGD QS+EQ+LSTFS H++ IV IL SL L DE+ +GTDP
Sbjct: 362 FDGSELSVFDEVFADIGDEQSIEQSLSTFSAHMTNIVKILNQADSRSLCLFDELCAGTDP 421
Query: 447 SEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILW 506
+EG ALA SIL +L + + TTHY++L ENA EF++ETLRPTY++L
Sbjct: 422 TEGAALAISILSFLHNMKCRTMATTHYSELKVFALSTPGVENACCEFNVETLRPTYKLLI 481
Query: 507 GSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQAR 566
G G SNA I++ +G II A+ + E +L +L + R +E +
Sbjct: 482 GIPGKSNAFAISRQLGLPDYIIDDAKTHL-----ESNDEAFEDLLANLEQSRVTIEKERE 536
Query: 567 TAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQL 626
AS EI L + IE + + LD R L ++ Q+ L AK D +++ N+L
Sbjct: 537 EIASYKEEISRLKKNIEQKEERLDERKEKLLKNANEEAQRILREAKETADQTIRNI-NKL 595
Query: 627 RDASADEINSLIKESESAIAAIVEA-HRPDDDFSVSETN--TSSFTP---QFGEQVHVKS 680
+S + KE E+ + E + D S+ + +P + G+ V V +
Sbjct: 596 AASSG-----VGKELEAERTKLREKLDKVDKSLSLKNNKGPKKTISPKKLKIGDGVKVLT 650
Query: 681 LGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQ 740
+ K TV +P + VQ G +R V ++ + A+ P L R
Sbjct: 651 MNLK-GTVSTLPNAKGDLYVQMGILRSLVNIKDLELL-----DEASVSGPGLDPAALKRN 704
Query: 741 SGSAGSSNEEASY--GPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHG 796
+ +G S+ P V +L GM +EA LD L A + V+HG
Sbjct: 705 NTGSGKIKMAKSFSVSPEV-------NLIGMTTDEAMPVLDKYLDDAYLAHLPQVRVVHG 757
Query: 797 MGTGVVKERVLEILRNHPRVAKYEQE 822
GTG ++ V H + KY +E
Sbjct: 758 RGTGALRAAV----HKHLKKLKYVKE 779
>gi|386087362|ref|YP_006003236.1| Mismatch repair ATPase (MutS family) [Streptococcus thermophilus
ND03]
gi|312279075|gb|ADQ63732.1| Mismatch repair ATPase (MutS family) [Streptococcus thermophilus
ND03]
Length = 783
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 349/722 (48%), Gaps = 104/722 (14%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 241
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 542 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 596
+R E L ++E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQIVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGIWEAQVGLIKMSLKADEFTL 675
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RTQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 777 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 832
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 833 YI 834
+
Sbjct: 781 TL 782
>gi|350567081|ref|ZP_08935686.1| DNA mismatch repair protein MutS [Peptoniphilus indolicus ATCC
29427]
gi|348659744|gb|EGY76471.1| DNA mismatch repair protein MutS [Peptoniphilus indolicus ATCC
29427]
Length = 766
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 201/690 (29%), Positives = 346/690 (50%), Gaps = 80/690 (11%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG-IDKPLITKRRSRMCVGIKAS 185
I D AS+ L IR + + DS+ +++++ I + ++T R R + +K
Sbjct: 148 IADSASQKLSSIRRQISKKK---DSIRERLSSMISSGSEYLQDAIVTIREGRYVIPVKNE 204
Query: 186 HKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSE 245
HK + GI +VSSS T ++EP V NN L E E IL +++ +
Sbjct: 205 HKSKVK-GIVHDVSSSKQTVYIEPLAVVNINNELRSLEVEEREEIERILQEISSRVDDVR 263
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
EI D + EID FA+ + DG PI++ + +V N++ +HPLL +
Sbjct: 264 HEILLNQDLLREIDFIFAKGKLSLEYDGRKPIINDKGYV------NLKSARHPLLDKKKV 317
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
VPIDI + E ++ITGPNTGGKT
Sbjct: 318 -----------------------------------VPIDISLGGEFTSLIITGPNTGGKT 342
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
S+KTLGL +LM++ GL++P + + FD +LADIGD QS+EQ+LSTFS H+ IV+I
Sbjct: 343 VSIKTLGLLTLMAQYGLHIPTMENSEIAIFDKVLADIGDEQSIEQSLSTFSSHMVNIVEI 402
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
L+ ++ +SLV+ DE+G+GTDP+EG ALA SI+ ++ R + TTHY L
Sbjct: 403 LKEITPKSLVIFDELGAGTDPTEGAALARSIMDFMLRRKIRCISTTHYNQLKLYALSTDG 462
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
+NA+ EF+++TL PTY++L G G SNA I++ +G II+ A+K++ E +
Sbjct: 463 VQNASMEFNVDTLSPTYKLLIGVPGKSNAFEISRKLGLPDIIIRDAKKMISEDNIEFE-- 520
Query: 546 RKSELYQSLMEERRKLE--SQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQ 603
E+ S+ ++R ++E QA SL + + + E E + +R KA+E +
Sbjct: 521 ---EVLSSIEKDRTRIEEYKQAAEIESLEYKKKNEKLKKEIEKLNQEREKVLEKARE--E 575
Query: 604 VQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSET 663
+ + + ++ V+ + ++LR+ ++E++ ++ + ++F + +
Sbjct: 576 ANRLVLTTRENMELVINEL-SELREQMNSAQARKLQEAQDLYRESFKSAQKKNEFVLEKA 634
Query: 664 NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRK 723
+ + GE V SL + V+E+P + VL+Q G +++++ P+ R
Sbjct: 635 DEVIGELKVGETVRSTSLNSE-GVVLELPDSKNQVLLQMGMLKMKL------PLDTLIRT 687
Query: 724 NAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IA 781
NA ++E +++ + ++++ Y K+ +D+RG E+A +D I
Sbjct: 688 NA---------EKEVQKTKTRNIIDKKSKY------IKSEIDIRGNNFEDARVIVDKYID 732
Query: 782 LACWESRSVLFVIHGMGTGVVKERVLEILR 811
A + +IHG GTGV++E++ + LR
Sbjct: 733 DAYLSGIKEIRIIHGKGTGVLREKIRDYLR 762
>gi|322516027|ref|ZP_08068964.1| exopolyphosphatase [Streptococcus vestibularis ATCC 49124]
gi|322125442|gb|EFX96788.1| exopolyphosphatase [Streptococcus vestibularis ATCC 49124]
Length = 791
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 203/727 (27%), Positives = 345/727 (47%), Gaps = 115/727 (15%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 156 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRN 211
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ G+ ++SSSG T ++EP+ ++ N +L E E T IL L+ ++ I
Sbjct: 212 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHEMTRILHELSNQLRPQAAAI 270
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ +D + + Q V P +S + ++ + ++HPLL+
Sbjct: 271 ANNAWILGHMDFIRGKYLYLQDKKAVIPKISD------NQTLQLLNVRHPLLVN------ 318
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
PV D+ + + +VITGPNTGGKT +
Sbjct: 319 -------------------------------PVANDLHFDEDLTAIVITGPNTGGKTVML 347
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 348 KTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDA 407
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 408 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 467
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 468 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 518
Query: 549 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 519 DVNRIIEQLEAQTVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 569
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 657
L A+ I +V D + E +S++K +S+ +++A P D
Sbjct: 570 LEKAQKDIQDMV--------DTALAESDSILKTLHDKSQLKPHEVIDAKGKLKKLAPQVD 621
Query: 658 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
S ++ ++ P+ G+ + V + G + + + Q G +++ +K
Sbjct: 622 LSKNKVLRKAKKEKTTRAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMTLKA 679
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
+ + R A P+ ++ + ++AS GPR + LDLRG R
Sbjct: 680 DEFTLV----RAQAEVKQPK-------KKQINVVKKAKKASGGPRAR-----LDLRGKRY 723
Query: 772 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 827
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 724 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 783
Query: 828 GCTVAYI 834
GCT+A +
Sbjct: 784 GCTIATL 790
>gi|422849469|ref|ZP_16896145.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK115]
gi|325689443|gb|EGD31448.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK115]
Length = 777
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 239/851 (28%), Positives = 382/851 (44%), Gaps = 141/851 (16%)
Query: 12 PFGKSLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRT 71
P K + L T +Q L+ +DI + L+ E A++R
Sbjct: 36 PTSKKETVASAFLEMTDMQQIFVQHPHFSLAATQDITALTKRLELESDLNIEEFLALKRV 95
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
L AV K E +L+ L++ L E N +L+ + D I A
Sbjct: 96 L-AVTQELKSFYE--DLENVHLEKLDRLFE---NLAVFPKLQGSLQAVNDGGF--IESFA 147
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKYL 189
SE L IR R ++ ++ ++++ +I + G + ++ R R + +K +++
Sbjct: 148 SESLSRIR----RKIQENENQVREILQEILKNKGEMLADQVVASRNGRNVLPVKNTYRNR 203
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLT-------AEIA 242
+ G+ ++S+SG T ++EP+ V N E E IL L+ AEIA
Sbjct: 204 I-SGVVHDISASGNTVYIEPRAVVNLNEEIASSRADERYEIQRILQELSDLFRPHAAEIA 262
Query: 243 KSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLG 302
+ I +L DL A+ F Q V P LS + + S ++HPL
Sbjct: 263 NNAWIIGHL-------DLVRAKVRFMQETGAVVPDLSEEQDIQLLS------VRHPL--- 306
Query: 303 SSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTG 362
+EN+ V D+ + +VITGPNTG
Sbjct: 307 -------------------IENA---------------VANDLHFGPDLTEIVITGPNTG 332
Query: 363 GKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRI 422
GKT +KTLGLA +M+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ I
Sbjct: 333 GKTIMLKTLGLAQIMAQSGLPILADKGSRVGIFSQIFADIGDEQSIEQSLSTFSSHMTNI 392
Query: 423 VDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDK 482
V ILE V ESLVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L +
Sbjct: 393 VSILEQVDSESLVLLDELGAGTDPQEGAALAIAILEDLRLRQIKTMATTHYPELKAYGIE 452
Query: 483 DTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQ---------- 532
ENA+ EF ++LRPTYR + G G SNA IA+ +G I+ AQ
Sbjct: 453 TDWVENASMEFDTDSLRPTYRFMQGVPGRSNAFEIARRLGLSELIVSHAQEQTDTDSDVN 512
Query: 533 KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRR 592
+++ERL E +KLES+ R +D RE+E E +R
Sbjct: 513 RIIERL------------------EEQKLESRKR---------LDNIREVEQENLKFNRA 545
Query: 593 AAHLKAKETQQVQQELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAI 645
L + ++ + ELN A+++ +V + +L D S+ + + +I E+++ +
Sbjct: 546 LKKLYNEFNREKETELNKARLEAQEIVDLALSESESILKKLHDKSSLKPHEII-EAKAQL 604
Query: 646 AAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
+ V + + P+ G+ + V S G + V ++ D Q G +
Sbjct: 605 KKLAPETVDLSKNKVLKQAKKNRAPKVGDDILVTSYGQRGTLVKQLK--DGRWEAQVGLI 662
Query: 706 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 765
++ +++ + K + P+ ++ +++ +AG K LD
Sbjct: 663 KMTLEEQEFNLLKAEKEQQ-----PKRKQVNVVKRANTAG--------------PKARLD 703
Query: 766 LRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQES 823
LRG R EEA +LD I A + + + +IHG+GTGV++E V + LR + V + +
Sbjct: 704 LRGKRYEEAMEELDAFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGY-A 762
Query: 824 PMNYGCTVAYI 834
P N G + A I
Sbjct: 763 PQNAGGSGATI 773
>gi|404483872|ref|ZP_11019087.1| MutS2 family protein [Clostridiales bacterium OBRC5-5]
gi|404342884|gb|EJZ69253.1| MutS2 family protein [Clostridiales bacterium OBRC5-5]
Length = 785
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 234/822 (28%), Positives = 377/822 (45%), Gaps = 113/822 (13%)
Query: 17 LEESQKLLNQTSAALAMMQSQP-LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+ E QK T+AA+ ++ + L LS ++DI+ L G LS E+ V L +
Sbjct: 40 ISEIQKNQAYTTAAVDRIRLKGNLALSEVKDISDSLKRLEIGSSLSQPELMKV---LSIL 96
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDL 135
N K +T + D Y L E ++ + + +L++++ CI + I+ D AS +L
Sbjct: 97 NAASKAITYGLHSEADD---YDVLEEYFRSLDEIKDLKKELSRCIISEE-IMADNASPEL 152
Query: 136 ELIRAERKRNMENLDSLLKKVAAQIFQAG--GIDKPLITKRRSRMCVGIKASHKYLLPDG 193
IR R ++ ++S + I A + +IT+R C+ IK+ +K + G
Sbjct: 153 SHIR----RKIKQINSKMHTELNNILNAHREYLMDAVITQRDGAYCLPIKSEYKNKVS-G 207
Query: 194 IALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMD 253
+ + SS+G+T F+EP + NN L+ E E IL L+ A+ E++
Sbjct: 208 VVHDQSSTGSTVFIEPIAVIRMNNELKSLAMDEKKEIEKILENLSLLAAQYIEELRENAK 267
Query: 254 RVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASS 313
++ +D +A+A ++ M+ P +S+ + INI+ +HPLL +
Sbjct: 268 TLIFLDFVYAKANLSKKMNASEPKFNSKHY------INIKEGRHPLLDAKKV-------- 313
Query: 314 NSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGL 373
VPI+I + +++ITGPNTGGKT S+KT+GL
Sbjct: 314 ---------------------------VPINISLGDTYDLLIITGPNTGGKTVSLKTVGL 346
Query: 374 ASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRES 433
+LM ++GL++PA L F + ADIGD QS+EQ+LSTFSGH+ IV IL S
Sbjct: 347 FTLMGQSGLHIPAFEGSELSVFTDVFADIGDEQSIEQSLSTFSGHMKNIVYILNHADANS 406
Query: 434 LVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEF 493
L L DE+ +GTDP+EG ALA SIL +L + TTHY++L + ENA+ EF
Sbjct: 407 LCLFDELCAGTDPTEGAALAISILSFLHRMQSRCIATTHYSELKVFALNEPGVENASCEF 466
Query: 494 SLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRA-----------QKLVERLRPER 542
+ TL PTYRIL G G SNA IA +G II A + L+ RL +R
Sbjct: 467 DVATLSPTYRILIGVPGKSNAFAIAGKLGLPDYIISEADTHLEKDAKDFEDLLTRLENDR 526
Query: 543 QQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQ 602
Q K +L S+ + +R++ES R + +I +EAK+ R+ +AKET
Sbjct: 527 QIIEKDKL--SIQKYKREIESLKRHYDKQEENLAARKEKILEEAKEAARKILE-EAKETA 583
Query: 603 QVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSE 662
DT+ +N + AS + S ++E + + + ++ + +
Sbjct: 584 D------------DTI----KNINKIASGAGLGSALEEQRTRLRESI--NKNTKTAGIKQ 625
Query: 663 TNTSSFTP---QFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPN 719
+ P + G+ VHV SL V +P VQ G +R +V +++ +
Sbjct: 626 NTVKAKKPKELKLGDSVHVISLNLD-GIVSSLPNQSGNFFVQMGILRSQVNISDVALVE- 683
Query: 720 SKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD 779
P + + R S S+ T +++ G V+EA +LD
Sbjct: 684 -------EPGNKPENKTRTRSSSMVKSA-----------TISTEINVIGKNVDEACSELD 725
Query: 780 IAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKY 819
L A + +IHG GTG +++ + L+ + Y
Sbjct: 726 KYLDDALLAHLPGVRIIHGRGTGALQKGIHAYLKRQTFIKSY 767
>gi|387784883|ref|YP_006070966.1| DNA mismatch repair protein [Streptococcus salivarius JIM8777]
gi|338745765|emb|CCB96131.1| DNA mismatch repair protein [Streptococcus salivarius JIM8777]
Length = 782
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 202/727 (27%), Positives = 346/727 (47%), Gaps = 115/727 (15%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIANRNGRSVLPVKNTYRN 202
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L+ ++ I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHEMARILHELSDQLRPQAAAI 261
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ +D + + Q V P +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGHMDFIRGKYLYLQDKKAVIPKISD------NQTLQLHNVRHPLLVN------ 309
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
PV D++ + + +VITGPNTGGKT +
Sbjct: 310 -------------------------------PVANDLRFDEDLTAIVITGPNTGGKTVML 338
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 339 KTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDA 398
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 399 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 458
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 459 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 509
Query: 549 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 510 DVNRIIEQLEAQTVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 560
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 657
L A+ +I +V D + E +S++K +S+ +++A P D
Sbjct: 561 LEKAQKEIQDMV--------DTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLSPQVD 612
Query: 658 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
S ++ ++ P+ G+ + V + G + + + Q G +++ +K
Sbjct: 613 LSKNKVLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMTLKA 670
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
+ + R A QQ ++ + +++S GPR + LDLRG R
Sbjct: 671 DEFTLV----RAQA-------EAQQPKKKQINVVKKAKKSSGGPRAR-----LDLRGKRY 714
Query: 772 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 827
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 715 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 774
Query: 828 GCTVAYI 834
GCT+A +
Sbjct: 775 GCTIATL 781
>gi|418966331|ref|ZP_13518074.1| MutS2 family protein [Streptococcus constellatus subsp.
constellatus SK53]
gi|383340349|gb|EID18656.1| MutS2 family protein [Streptococcus constellatus subsp.
constellatus SK53]
Length = 776
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 241/838 (28%), Positives = 385/838 (45%), Gaps = 138/838 (16%)
Query: 23 LLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKL 82
L T +Q L+ +DI G+ L+ E A++R L V ++L
Sbjct: 47 FLEMTDMQQIFVQRPHFSLAATQDITGLTKRLELEGDLNIEEFLALKRIL----TVTQEL 102
Query: 83 TEAAE-LDGDSLQRYSPLLELL---KNCNFLTELEEKIGFCIDCKLLIILDRASEDLELI 138
T+ + L+ LQR + L E L N L + + GF AS++L I
Sbjct: 103 TDFYDKLENVDLQRLNRLFEKLLAFPNLQGLLQAINEGGFVESF--------ASDNLARI 154
Query: 139 RAERKRNMENLDSLLKKVAAQIFQAGG---IDKPLITKRRSRMCVGIKASHKYLLPDGIA 195
R R ++ + ++ + I + G +D+ ++ R R + +K + + + G+
Sbjct: 155 R----RKIQENEVQVRDILQDILKTKGDMLVDQ-VVASRNGRNVLPVKNTFRNRIS-GVV 208
Query: 196 LNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL----------TAEIAKSE 245
++S+SG T ++EP+ V N ++N++ E IL +L EIA +
Sbjct: 209 HDISASGNTVYIEPRAVVNLNE---EITNAQADERHEILRILQELSDRIRPHIVEIANNA 265
Query: 246 REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSL 305
I +L DL A+ F Q V P+LS + I + + HPL
Sbjct: 266 WIIGHL-------DLVRAKVCFMQERGAVVPMLSDSKY------IRLLHVTHPL------ 306
Query: 306 RSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKT 365
+EN+ V D+ + +VITGPNTGGKT
Sbjct: 307 ----------------IENA---------------VANDLYFASDLTEIVITGPNTGGKT 335
Query: 366 ASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDI 425
+KTLGLA LM+++GL + A N R+ FD I ADIGD QS+EQ+LSTFS H++ IV I
Sbjct: 336 IMLKTLGLAQLMAQSGLPILADNGSRVGIFDQIFADIGDEQSIEQSLSTFSSHMTNIVAI 395
Query: 426 LELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTR 485
LE SLVL+DE+G+GTDP EG ALA +IL+ LR R + TTHY +L +
Sbjct: 396 LEQSDENSLVLLDELGAGTDPQEGAALAMAILEDLRLRQVKTMATTHYPELKAYGIEMAG 455
Query: 486 FENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQH 545
+NA+ EF +LRPTYR + G G SNA IA+ +G ++++ AQ+L + + +
Sbjct: 456 VQNASMEFDTASLRPTYRFMQGVPGCSNAFEIARRLGLSDRVVKDAQELTD---TDSDVN 512
Query: 546 RKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQ 605
R E E + LES+ R +D RE+E E +R L + ++ +
Sbjct: 513 RIIERL-----EEQTLESRKR---------LDNIREVEQENLKFNRALKKLYNEFNREKE 558
Query: 606 QELNFAKVQIDTVV-------QDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
ELN A+++ +V + L D S+ + + +I E++S + +
Sbjct: 559 TELNKARLEAQEIVDLALSESESILKNLHDKSSLKPHEII-EAKSQLKKLAPETVDLSQN 617
Query: 659 SVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIP 718
V + + P+ G+ + V S G + V ++ D Q G +++ +++ +
Sbjct: 618 KVLKQAKKARKPKVGDDILVISYGQRGTLVNQLK--DGRWEAQVGLIKMTLEEAEFNLLK 675
Query: 719 NSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQL 778
+ K + P+ RKQ + GPR + LDLRG R EEA +L
Sbjct: 676 SEKEQ------PK-RKQ--------VNVVKRTTTSGPRAR-----LDLRGKRYEEAMQEL 715
Query: 779 D--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNYGCTVAYI 834
D I A + + + +IHG+GTGV++E V + LR + V + +P N G + A I
Sbjct: 716 DTFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGY-APQNAGGSGATI 772
>gi|227877596|ref|ZP_03995650.1| MutS family DNA mismatch repair protein [Lactobacillus crispatus
JV-V01]
gi|227862790|gb|EEJ70255.1| MutS family DNA mismatch repair protein [Lactobacillus crispatus
JV-V01]
Length = 785
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 215/736 (29%), Positives = 347/736 (47%), Gaps = 123/736 (16%)
Query: 127 ILDRASEDLELIRAERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+LD AS +L +R + + N E +D+ K +++ + + ++T R R + +
Sbjct: 146 VLDTASHELARLRHDIRSNEEEIKNKMDAYTKGNSSKY-----LSEQIVTIRDDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ G+ + S+SG T F+EPK + NN + L E E IL L+ +A
Sbjct: 201 KQEYRAKF-GGVVHDQSASGQTLFIEPKAVLNLNNRQQNLIAQEKQEVRNILKNLS-NLA 258
Query: 243 KSE-REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
+ E + + + E+D A+A A+ M P L+ D S+N+ +HPL+
Sbjct: 259 REEITSLNNIAAALTELDFLQAKAKLAKEMKASEPRLTQ------DHSLNLLKARHPLI- 311
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
+P K VP DI++ E ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGGEFDTMLITGPNT 337
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKQVYADIGDEQSIEQSLSTFSSHIND 397
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
I+ I++ V E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IIAIMKNVDSETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGY 457
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARKLGMREDVVKNAQNLM------ 511
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
S++ + + KL +Q + A + D ++ L+++
Sbjct: 512 --SDEDSDINKMIT----KLNTQTKAATVARNRLQTSL----DRSQKLEQKLQQALDWYN 561
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESESAIAAIVEAHR 653
Q+VQ++L+FA+ + + VV R ADEI N +KE++ I+EA
Sbjct: 562 QRVQKQLDFAQERANEVVAQ-----RRKKADEIIAQLEKQKNMGVKENK-----IIEAKG 611
Query: 654 PDDDFSVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYG 703
+ N + + Q ++ H S+GD++ + G T+ VQ G
Sbjct: 612 ELNSLERQANNLAHNKVLQREKRRHHVSVGDRVKVLSY--GQTGTITKKLSEHEYEVQMG 669
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
++V+V +I I ++ + P +R A+ R + +
Sbjct: 670 IIKVKVSDRDIERI---EKGESTKPRQTVR-----------------ATSAVRRSNAHSE 709
Query: 764 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKY 819
LDLRG R +EA LD I + +IHG+GTG +++ V + LR NH + Y
Sbjct: 710 LDLRGQRYDEAMTNLDRYIDSVLLAGLDTVTIIHGIGTGAIRKGVWQYLRSSNHVKNFNY 769
Query: 820 EQESPMNYGCTVAYIK 835
+ G T+ +K
Sbjct: 770 APANEGGNGATIVQLK 785
>gi|256849050|ref|ZP_05554483.1| mismatch repair protein [Lactobacillus crispatus MV-1A-US]
gi|262047532|ref|ZP_06020487.1| mismatch repair protein [Lactobacillus crispatus MV-3A-US]
gi|256713826|gb|EEU28814.1| mismatch repair protein [Lactobacillus crispatus MV-1A-US]
gi|260572108|gb|EEX28673.1| mismatch repair protein [Lactobacillus crispatus MV-3A-US]
Length = 785
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 217/736 (29%), Positives = 343/736 (46%), Gaps = 123/736 (16%)
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPL----ITKRRSRMCVGI 182
+LD AS +L +R + + N E + K + G K L +T R R + +
Sbjct: 146 VLDTASHELARLRHDIRSNEEEI-----KNKMDAYTKGNSSKYLSEQIVTIRDDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ G+ + S+SG T F+EPK + NN + L E E IL L+ +A
Sbjct: 201 KQEYRAKF-GGVVHDQSASGQTLFIEPKAVLNLNNRQQNLIAQEKQEVRNILKNLS-NLA 258
Query: 243 KSE-REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
+ E + + + E+D A+A A+ M P L+ D S+N+ +HPL+
Sbjct: 259 REEITSLNNIAAALTELDFLQAKAKLAKEMKASEPRLTQ------DHSLNLLKARHPLI- 311
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
+P K VP DI++ E ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGGEFDTMLITGPNT 337
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKQVYADIGDEQSIEQSLSTFSSHIND 397
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
I+ I++ V E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IIAIMKNVDSETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGY 457
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARKLGMREDVVKNAQNLM------ 511
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
S++ + + KL +Q + A + D ++ L+++
Sbjct: 512 --SDEDSDINKMIT----KLNTQTKAATVARNRLQTSL----DRSQKLEQKLQQALDWYN 561
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESESAIAAIVEAHR 653
Q+VQ++L+FA+ + + VV R ADEI N +KE++ I+EA
Sbjct: 562 QRVQKQLDFAQERANEVVAK-----RRKKADEIIAQLEKQKNMGVKENK-----IIEAKG 611
Query: 654 PDDDFSVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYG 703
+ N + + Q ++ H S+GD++ + G T+ VQ G
Sbjct: 612 ELNSLERQANNLAHNKVLQREKRRHHVSVGDRVKVLSY--GQTGTITKKLSEHEYEVQMG 669
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
++V+V +I I ++ + P +R A+ R + +
Sbjct: 670 IIKVKVSDRDIERI---EKGESTKPRQTVR-----------------ATSAVRRSNAHSE 709
Query: 764 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKY 819
LDLRG R +EA LD I + +IHG+GTG +++ V + LR NH + Y
Sbjct: 710 LDLRGQRYDEAMTNLDRYIDSVLLAGLDTVTIIHGIGTGAIRKGVWQYLRSSNHVKNFNY 769
Query: 820 EQESPMNYGCTVAYIK 835
+ G T+ +K
Sbjct: 770 APANEGGNGATIVQLK 785
>gi|228477326|ref|ZP_04061964.1| DNA mismatch repair protein [Streptococcus salivarius SK126]
gi|228251345|gb|EEK10516.1| DNA mismatch repair protein [Streptococcus salivarius SK126]
Length = 782
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 203/727 (27%), Positives = 346/727 (47%), Gaps = 115/727 (15%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRN 202
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L+ ++ I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHEMARILHELSDQLRPQAAAI 261
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ ID + + Q V P +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGHIDFIRGKYLYLQDKKAVIPKISD------NQTLQLLNVRHPLLVN------ 309
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
PV D++ + + +VITGPNTGGKT +
Sbjct: 310 -------------------------------PVANDLRFDEDLTAIVITGPNTGGKTVML 338
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 339 KTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDA 398
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 399 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 458
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 459 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 509
Query: 549 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 510 DVNRIIEQLEAQSVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 560
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 657
L A+ +I +V D + E +S++K +S+ +++A P D
Sbjct: 561 LEKAQKEIQDMV--------DTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLAPQVD 612
Query: 658 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
S ++ ++ P+ G+ + V + G + + + Q G +++ +K
Sbjct: 613 LSKNKVLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMTLKA 670
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
+ + R A QQ ++ + +++S GPR + LDLRG R
Sbjct: 671 DEFTLV----RAQA-------EAQQPKKKQINVVKKAKKSSGGPRAR-----LDLRGKRY 714
Query: 772 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 827
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 715 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 774
Query: 828 GCTVAYI 834
GCT+A +
Sbjct: 775 GCTIATL 781
>gi|408402357|ref|YP_006860321.1| recombination inhibitory protein MutS2 [Streptococcus dysgalactiae
subsp. equisimilis RE378]
gi|407968586|dbj|BAM61824.1| recombination inhibitory protein MutS2 [Streptococcus dysgalactiae
subsp. equisimilis RE378]
Length = 778
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 245/865 (28%), Positives = 399/865 (46%), Gaps = 139/865 (16%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQPLD--------LSTIEDIAGILNSAVSGQLLS 61
Q+ F K E+ + L + Q +PL+ IE++AGI L S
Sbjct: 8 QLEFDKVKEQFRAYLQTEQGNRELDQLEPLNHHDKIKHYFLEIEEMAGIFVEQHHFALGS 67
Query: 62 PSEICAVRRTLR-----------AVNNVWKKLTEAAEL--DGDSLQRYSPLLELLKNCNF 108
S+I A R L AV + + EA+ D +++Q L L +N
Sbjct: 68 LSDISASMRRLELEADLSIPELLAVKKILQVSAEASRFYVDLENVQ-LQALKRLFENLEL 126
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIR---AERKRNMEN-LDSLLKKVAAQIFQAG 164
L+ + D + AS +LE IR ++++ N L LLKK Q
Sbjct: 127 FPSLQGSLQAINDGGF--VESFASPELEKIRRSISDKEHASRNVLQDLLKK------QGD 178
Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
+ + LI R R + +K + + + G+ ++S+SG T ++EP+ V+ N +L
Sbjct: 179 YLSESLIASRNGRSVLPVKNTFRNKVA-GVVHDISASGNTVYIEPRALVQLNEELTQLQA 237
Query: 225 SEIAEETAILSLLTAEIAKSEREIK---YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 281
E E + +L L+ I R + +++ L F RA + D + +
Sbjct: 238 DERHEVSRVLQALSDLIRPHSRALTNNAWILGH-----LDFIRAKYLYMRDNKATVPA-- 290
Query: 282 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
+S D S+ + ++HPLL PV
Sbjct: 291 --ISDDKSLQLLNVRHPLL-------------------------------------QEPV 311
Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
D+ + V+VITGPNTGGKT +KTLGLA LM+++GL + A ++ F I AD
Sbjct: 312 ANDLHFSKDLAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFSGIFAD 371
Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
IGD QS+EQ+LSTFS H++ IV IL +SLVL DE+G+GTDP EG +LA +IL+ LR
Sbjct: 372 IGDEQSIEQSLSTFSSHMTHIVAILNQADADSLVLFDELGAGTDPQEGASLAMAILEQLR 431
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
+ TTHY +L + ENA+ EF +L+PTYR + G G SNA IA+ +
Sbjct: 432 LTNIKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPGRSNAFEIARRL 491
Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMD 577
G I++ AQ + + + +R E L + +E R++L+ + + +
Sbjct: 492 GLAEHIVKEAQNMTD---TDSDVNRIIEQLEKQTLESRKRLDYIREVEQDNLKFNRAVKK 548
Query: 578 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL 637
LY E +AKD + A L+A+E ++ A + D+++ NQL D +A + + +
Sbjct: 549 LYNEF-SQAKDKEIEKATLEAREI------VDLALAESDSIL----NQLHDKAALKPHEV 597
Query: 638 IKESESAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
I E++ + +V P+ S V + P+ G+ + V + G + V E+
Sbjct: 598 I-EAKGQLKQLV----PEKSLSQNKVLKKAKQLRAPRVGDDIIVTAYGQRGTLVKELK-- 650
Query: 695 DDTVLVQYGKMRVRVKKNN---IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEA 751
D Q G +++ +K++ ++ + S++ P+ + +++ + G
Sbjct: 651 DKKWEAQVGLIKMTLKEDEFSLVKVVEESQK-------PKKKAINVVKKAATGG------ 697
Query: 752 SYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEI 809
GPR + LDLRG R EEA +LD I A + S + +IHG+GTGV++E V +
Sbjct: 698 --GPRAR-----LDLRGKRYEEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIREAVTKY 750
Query: 810 LR--NHPRVAKYEQESPMNYGCTVA 832
LR H + Y ++ GCT+A
Sbjct: 751 LRRNKHVKSFGYAPQNAGGSGCTIA 775
>gi|281412927|ref|YP_003347006.1| MutS2 family protein [Thermotoga naphthophila RKU-10]
gi|281374030|gb|ADA67592.1| MutS2 family protein [Thermotoga naphthophila RKU-10]
Length = 757
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 232/800 (29%), Positives = 356/800 (44%), Gaps = 110/800 (13%)
Query: 41 LSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLL 100
+ + DI+ + SG L P E+ V L + + KK E E YS L
Sbjct: 60 IKGLNDISQEVERVKSGSALEPWELLRVSVFLEGCD-ILKKDFEKRE--------YSRLK 110
Query: 101 ELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQI 160
E + + E++ CI+ I DRAS L IR E+KR L S +K+ A
Sbjct: 111 ETFSRLSSFRDFVEEVNRCIEQDGEIS-DRASPRLREIRTEKKR----LASEIKRKADDF 165
Query: 161 FQAGG--IDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNM 218
+ + + + R R +KAS + + GI ++SSSGAT F+EP VE NN
Sbjct: 166 VRTHSQILQEQMYVYRDGRYLFPVKASMRNAV-RGIVHHLSSSGATVFLEPDEFVELNNR 224
Query: 219 EVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPIL 278
L E E + IL LT + +++ ++ + D +AR FA+ +G
Sbjct: 225 VRLLEEEERLEISRILRQLTNILLSRLNDLERNVELIARFDSLYARVKFAREFNGTV--- 281
Query: 279 SSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISD 338
V S I + +HPL+ +
Sbjct: 282 -----VKPSSRIRLVNARHPLIPKERV--------------------------------- 303
Query: 339 FPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLI 398
VPI++++ R +ITGPN GGKT ++KT+GL + + +G LP L F I
Sbjct: 304 --VPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPKI 361
Query: 399 LADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQ 458
+ADIG+ QS+EQ+LSTFS H+ +IV+I++ +SLV++DE+GSGTDP EG ALA +I++
Sbjct: 362 MADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAIAIIE 421
Query: 459 YLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIA 518
L ++ VTTH + NA+ EF ETL PTYR+L G G S+A IA
Sbjct: 422 DLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSHAFQIA 481
Query: 519 KSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL 578
+ +G D++II+ A R R R++ L +SL E+ LE + R E M L
Sbjct: 482 EKLGLDKRIIENA-----RSRLSREEMELEGLIRSLHEKISLLEEEKRKLQKEREEYMKL 536
Query: 579 YREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLI 638
+ E++ K L R KE +++ + K ++D + + + S DE+ +
Sbjct: 537 REKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAI----HVAKTGSVDEMREAV 592
Query: 639 KESESAIAAIVEAHRPD-DDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDT 697
K +E + D + + E P G+ V ++ G + VVEV T
Sbjct: 593 K--------TIEKEKKDLEQKRIEEATEEEIKP--GDHVKMEG-GTSVGKVVEV--KSGT 639
Query: 698 VLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRV 757
LV +G +R++V P+ K+ + SY P
Sbjct: 640 ALVDFGFLRLKV------PVSKLKKAKKE-----------------EKEESSAVSYRP-- 674
Query: 758 QTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPR 815
+ + +D+RGM VEEA + I S ++IHG GTG + V EILR R
Sbjct: 675 SSFRTEIDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEILRKDKR 734
Query: 816 VAKYEQESPMNYGCTVAYIK 835
V + +P G V ++
Sbjct: 735 VVSFRFGTPSEGGTGVTVVE 754
>gi|445382616|ref|ZP_21427302.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus MTCC 5460]
gi|445395409|ref|ZP_21429035.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus MTCC 5461]
gi|444748486|gb|ELW73452.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus MTCC 5461]
gi|444748654|gb|ELW73613.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus MTCC 5460]
Length = 783
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 348/722 (48%), Gaps = 104/722 (14%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 241
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRIAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 542 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 596
+R E L +E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMSLKADEFTL 675
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RAQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 777 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 832
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 833 YI 834
+
Sbjct: 781 TL 782
>gi|417001937|ref|ZP_11941410.1| recombination and DNA strand exchange inhibitor protein
[Anaerococcus prevotii ACS-065-V-Col13]
gi|325479647|gb|EGC82739.1| recombination and DNA strand exchange inhibitor protein
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 781
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 225/800 (28%), Positives = 382/800 (47%), Gaps = 90/800 (11%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
+DL + D++ I+N +L P+++ V LR V LT+ E D L +
Sbjct: 63 IDLFGLYDLSDIVNYIRKNGILDPADLIKVLDLLR----VSSYLTDYGENIEDPLIK--D 116
Query: 99 LLELLKNCNFL-TELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
+ + + +FL E++ I I D AS+ L IR +++R ++ L
Sbjct: 117 IFDRISTNDFLKNEIDRSI-----INEEEIADNASQTLRNIRRQKQRKENDIRIKLNSYI 171
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
+ + +++ R R V +K + + ++ GI + SSSG T F+EP VE NN
Sbjct: 172 SSSKYEDALQDKVVSVRDGRFVVPVKTNKRSVIG-GIVHDKSSSGNTLFIEPAAIVELNN 230
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
L E E IL L+ + E+ + ID A+A FA + PI
Sbjct: 231 QLRDLEIKEEEEIRKILDRLSRLAQAFDVELLENQKLIARIDFLQAKAKFALENEMSLPI 290
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
+S + ++I+ +HPLL G
Sbjct: 291 ISDEK------ILDIKEARHPLLSGKV--------------------------------- 311
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VPID+++ ++ITGPNTGGKT S+KT+GL S M++ GL++PA R+ FD
Sbjct: 312 ---VPIDVRIGGSYTTLIITGPNTGGKTVSLKTVGLISAMAQTGLFIPADEGSRVSVFDD 368
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
I DIGD QS+E +LSTFS ++ IV+IL+ + +SLVL+DEIGSGTDP EG ALA SIL
Sbjct: 369 IFVDIGDTQSIEMSLSTFSASLTNIVEILKKATDKSLVLLDEIGSGTDPVEGAALAISIL 428
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
L + + TTHY++L + NA+ EF ++TL PTY++ G+ G SNA I
Sbjct: 429 NSLTKKEVMTFTTTHYSELKYYAVETPGVMNASVEFDVDTLSPTYKLEIGTPGKSNAFEI 488
Query: 518 AKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMD 577
+K +G +I++ A+ L+ +++ + + E+++++ES+ + EI
Sbjct: 489 SKRLGLPVEILKDAKDLIGE-----DNRNINKILEEIEEDKKEIESKNKEIDDYKKEIAR 543
Query: 578 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEIN-S 636
+ E+++++K L R+ + + + + L+ A + ++++ + R+A+ +I+ S
Sbjct: 544 IRNELKEKSKSLSRKEEDIIREAEDKANKILDKANKRSQDMLKEAKRS-RNANTSDIDRS 602
Query: 637 LIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDD 696
L K + +E R ++ S+ ++ + T + G+ V + L ++ A V+E P
Sbjct: 603 LNKIRTNYKEGRIE--RQGENLSLKQSKNAPKTLKVGDMVLIAGLNEE-AQVIEAPDHKG 659
Query: 697 TVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPR 756
+ VQ G +++ +NI+ + K N Q ++ ++ + P
Sbjct: 660 NIKVQMGILKM---DSNIKNVTKIKADN-----------QTEKNITKVYNTKKAMHISP- 704
Query: 757 VQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERVLEILRNHP 814
+LDLRG R +EA LD L A S +IHG GTG + + V EIL
Sbjct: 705 ------TLDLRGQRYDEAMRNLDKYLDDAMLAGLSKAKIIHGKGTGALIKGVGEILEGDR 758
Query: 815 RVA--KYEQESPMNYGCTVA 832
R++ ++ + YG T+
Sbjct: 759 RISDFRFGDDKEGGYGVTIV 778
>gi|55823654|ref|YP_142095.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066]
gi|81676513|sp|Q5LY40.1|MUTS2_STRT1 RecName: Full=MutS2 protein
gi|55739639|gb|AAV63280.1| DNA mismatch repair protein [Streptococcus thermophilus CNRZ1066]
Length = 783
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 348/722 (48%), Gaps = 104/722 (14%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 241
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 542 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 596
+R E L +E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMSLKADEFTL 675
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RTQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 777 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 832
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 833 YI 834
+
Sbjct: 781 TL 782
>gi|293336740|ref|NP_001168465.1| uncharacterized protein LOC100382240 [Zea mays]
gi|223948449|gb|ACN28308.1| unknown [Zea mays]
Length = 689
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 194/597 (32%), Positives = 304/597 (50%), Gaps = 71/597 (11%)
Query: 16 SLEESQKLLNQTSAALAMMQSQ--PLDLSTIEDIA--GILNSAVSGQLLSPSEICAVRRT 71
S E+SQ LL +T AA+ ++ + +D S ++ +A ++S G ++ E AV
Sbjct: 85 SYEQSQMLLQETEAAVLLLDNAGGAMDFSGLDTVAIESAIHSVSGGAVIKGLEAMAVTSL 144
Query: 72 LRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRA 131
+ V ++ + A +LD S R + L E + + L + I +D + D A
Sbjct: 145 MMFVESLQVNIKAAMKLDEGSCSRLTTLTETILDAVINKSLVKSIQDIVDDDG-SVKDTA 203
Query: 132 SEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLP 191
S +L R + +R L L+ K+ + + I R C+ +
Sbjct: 204 SPELRRYREQVQRLENRLYQLMDKLMRNADDEASLSEVCIVN--GRCCIRTTMDNSSFF- 260
Query: 192 DGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAE-ETAILSLLTAEIAKSEREIKY 250
DG+ L+ S +G+ +EP AV N+ E++ S + +A+ E +LS LT +I I+
Sbjct: 261 DGLLLSRSDAGS--MIEPIVAVPLND-ELQESRALVAKAELDVLSKLTDKIRLDLDSIQN 317
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILS----SQSHVSFDSSINIEGIK---------- 296
L+ +++D ARA ++ DG P L V+ + +I+ I
Sbjct: 318 LLQETIKLDKIAARAKYSIAYDGTFPDLYLPNFENETVTSATGGSIKQISSAQLPKKAWK 377
Query: 297 -------HPLLL-------GSSLRSLSAASSN-------------SNPLKSDVENSEMTV 329
HPLLL + R +++A++ + L SD+++ ++ V
Sbjct: 378 LYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAEEDQLASDLDSMKLRV 437
Query: 330 GSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNH 389
L K D PVP+D + ET V+VITGPNTGGKT S+KT+GLASLM+K GLY+ A
Sbjct: 438 SQLEK---DQPVPVDFMIAEETTVLVITGPNTGGKTISLKTVGLASLMAKIGLYILASEP 494
Query: 390 PRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEG 449
++PWF+ + ADIGD QSL Q+LSTFSGH+ +I I + ESLVL+DE+G+GT+P EG
Sbjct: 495 VKIPWFNAVYADIGDEQSLTQSLSTFSGHLKQIGAIRAESTSESLVLLDEVGAGTNPLEG 554
Query: 450 VALATSILQYLRDRVG-LAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGS 508
AL S+L+ + L + TTH+ +L LK + FENA EF E L+PT++ILWG
Sbjct: 555 AALGMSLLESFAEAGSFLTLATTHHGELKTLKYSNNSFENACMEFDEENLKPTFKILWGI 614
Query: 509 TGDSNALNIAKSIGFDRKIIQRAQKLV--------------ERLRPERQQHRKSELY 551
G SNA+NI + +G I++ +++L+ ERL+ E QQH + Y
Sbjct: 615 PGRSNAINITERLGLPLDIVESSRRLLGTAGAEINALIMDMERLKQEYQQHLQEAQY 671
>gi|55821734|ref|YP_140176.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311]
gi|81676665|sp|Q5M2P5.1|MUTS2_STRT2 RecName: Full=MutS2 protein
gi|55737719|gb|AAV61361.1| DNA mismatch repair protein [Streptococcus thermophilus LMG 18311]
Length = 783
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 348/722 (48%), Gaps = 104/722 (14%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 241
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 542 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 596
+R E L +E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMSLKADEFTL 675
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RTQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 777 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 832
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 833 YI 834
+
Sbjct: 781 TL 782
>gi|269122243|ref|YP_003310420.1| MutS2 family protein [Sebaldella termitidis ATCC 33386]
gi|268616121|gb|ACZ10489.1| MutS2 family protein [Sebaldella termitidis ATCC 33386]
Length = 780
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 225/811 (27%), Positives = 391/811 (48%), Gaps = 107/811 (13%)
Query: 39 LDLSTIEDIAGILNSA-VSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYS 97
L+L+ + DI L + + G LS ++ +R+ L AV + K + + +Y
Sbjct: 63 LELTNLSDIGKFLRTIDLIGSYLSVEDLAELRKNL-AVYRISKSRAKNIK------DKYG 115
Query: 98 PLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVA 157
+ + + L +LE+ I +D + + D AS L IR ++ N+ ++
Sbjct: 116 LVWNIFSDTEDLKDLEDFISEVVDDEGNM-KDTASLGLRDIRRQKSNINVNIKEKFDEII 174
Query: 158 AQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNN 217
I + ++TKR R + +K K L+ GI + SS+G+T ++EP V NN
Sbjct: 175 NNRDLQKAIQEKIVTKRNERYVIPVKTEFKSLVK-GIEHDRSSTGSTVYIEPLNTVSLNN 233
Query: 218 MEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPI 277
E E +L +T I + EI + D + +D A+ ++ + P
Sbjct: 234 KLREYEAKEREEIRKVLIRITELIRNKKDEIALIKDLLERLDFINAKVLYSIENECRVPK 293
Query: 278 LSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGIS 337
+ ++ ++ + +HPL ++ +M
Sbjct: 294 VVNKEYLKLVVA------RHPL----------------------IDREKM---------- 315
Query: 338 DFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDL 397
VPI+ ++ +++ITGPNTGGKT + K GL ++M+ +G+ +PA + +F
Sbjct: 316 ---VPINFELGDNDNIMLITGPNTGGKTVTQKIAGLLTIMALSGIPIPADEKTEIGFFGS 372
Query: 398 ILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSIL 457
+LADIGD QS+EQNLS+FS HI I +ILE +R SLVLIDEIGSGTDP EG A A S++
Sbjct: 373 VLADIGDEQSIEQNLSSFSAHIKNIKEILEAANRRSLVLIDEIGSGTDPMEGAAFAMSVI 432
Query: 458 QYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNI 517
YL + +++TTHY+++ ++A+ EF++ETL PTYR+L G G+SNAL I
Sbjct: 433 DYLNQKNVKSIITTHYSEVKAHAFNTDGIKSASMEFNVETLLPTYRLLEGIPGESNALII 492
Query: 518 AKSIGFDRKIIQRAQKLV--ERLRPERQ----QHRKSELYQSLME-ERRKLESQARTAAS 570
A G + +II A+ + E + E+ + + E+ + +E E K E ++R
Sbjct: 493 AGKYGINEEIINNAKSYISEENQKVEKMLISIKEKTDEVEKLKIELENAKEEMESR-KQK 551
Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
A+I+ L E+E + + A K ++VQ + AK +D + QD +++
Sbjct: 552 YEADIITL----ENEKNQIVKEAYDEADKYLREVQAK---AKNLVDKISQD---EMKKEE 601
Query: 631 ADEINSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQF--GEQVHVKSLGDKLATV 688
A K+++ ++ + E+ R + + +V + ++ F GE+V VKS+ +
Sbjct: 602 A-------KDAQRSLNMLRESFRLEKEQNVKKKVKTNKKTDFQLGEEVFVKSINQN-GKI 653
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSN 748
+ + G+ D+V +Q G +++ V ++I+ I +K A S S+N
Sbjct: 654 LRIIGESDSVQIQAGILKLVVSTDDIQKIEKKNKKKLGGFA-------------SLKSTN 700
Query: 749 EEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGVVKERV 806
K +DLRGM +EA +L++ L A S +++IHG GT ++ R+
Sbjct: 701 -----------VKGEVDLRGMTGDEAMTELELYLDRAMLTGYSEVYIIHGKGTMALRTRI 749
Query: 807 LEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
E L+ +++Y ++ GCTVA +K
Sbjct: 750 QEYLKKSKYISEYRDANQNEGGLGCTVAKLK 780
>gi|116628455|ref|YP_821074.1| MutS family DNA structure-specific ATPase [Streptococcus
thermophilus LMD-9]
gi|122266950|sp|Q03IU4.1|MUTS2_STRTD RecName: Full=MutS2 protein
gi|116101732|gb|ABJ66878.1| DNA structure-specific ATPase involved in suppression of
recombination, MutS family [Streptococcus thermophilus
LMD-9]
Length = 783
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 348/722 (48%), Gaps = 104/722 (14%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 241
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 542 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 596
+R E L +E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMSLKADEFTL 675
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RAQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 777 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 832
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 833 YI 834
+
Sbjct: 781 TL 782
>gi|386345470|ref|YP_006041634.1| DNA mismatch repair protein [Streptococcus thermophilus JIM 8232]
gi|387910457|ref|YP_006340763.1| DNA mismatch repair protein [Streptococcus thermophilus MN-ZLW-002]
gi|339278931|emb|CCC20679.1| DNA mismatch repair protein [Streptococcus thermophilus JIM 8232]
gi|387575392|gb|AFJ84098.1| DNA mismatch repair protein [Streptococcus thermophilus MN-ZLW-002]
Length = 783
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 207/722 (28%), Positives = 348/722 (48%), Gaps = 104/722 (14%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L+ IR R ++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKACDDAIRQTLQDILKKSGHMLAENLIASRNGRSVLPVKNTYRN 202
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLL-------TAEI 241
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L TA I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEKITQLRADERHEMARILHELSDQLRPHTAAI 261
Query: 242 AKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
A + + + MD F R + D I +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGH-MD--------FIRGKYLYLHDKKAII----PEISDNQTLQLLNVRHPLLI 308
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
PV D++ + + V+VITGPNT
Sbjct: 309 N-------------------------------------PVANDLRFDEDLTVIVITGPNT 331
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT +KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++
Sbjct: 332 GGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTH 391
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
IV+IL SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L
Sbjct: 392 IVEILNTADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGI 451
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
+ ENA+ EF TLRPTYR + G G SNA IA+ +G + I++ A+ L + +
Sbjct: 452 ETQHVENASMEFDTATLRPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---TD 508
Query: 542 RQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMDLYREIEDEA-KDLDRRAAHL 596
+R E L +E +++LE + + + LY E E K+L+
Sbjct: 509 SDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKELE------ 562
Query: 597 KAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDD 656
K +++Q+ ++ A + D+++++ ++ + + I++ K +AA V+ + +
Sbjct: 563 --KAQKEIQEMVDTALAESDSILKNLHDKSQLKPHEVIDA--KGKLKKLAAQVDLSK-NK 617
Query: 657 DFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRP 716
++ ++ P+ G+ + V + G + + + Q G +++ +K +
Sbjct: 618 VLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMSLKADEFTL 675
Query: 717 IPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEASH 776
+ R A P+ +Q + + +S GPR + LDLRG R EEA
Sbjct: 676 V----RAQAEAQQPK------KKQINVVKKAKKTSSDGPRAR-----LDLRGKRYEEAMQ 720
Query: 777 QLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNYGCTVA 832
+LD I A + S + +IHG+GTGV+++ V + LR H V +E +S GCT+A
Sbjct: 721 ELDAFIDQALLNNMSQVEIIHGIGTGVIRDAVTKYLRRHRHVKNFEYAPQSAGGSGCTIA 780
Query: 833 YI 834
+
Sbjct: 781 TL 782
>gi|329927098|ref|ZP_08281454.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF5]
gi|328938675|gb|EGG35054.1| recombination and DNA strand exchange inhibitor protein
[Paenibacillus sp. HGF5]
Length = 637
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 190/614 (30%), Positives = 306/614 (49%), Gaps = 68/614 (11%)
Query: 17 LEESQKLLNQTSAALAM--MQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRA 74
LE + LL T A + ++ P I DI L A G L+P E+ A T+
Sbjct: 40 LEAVKDLLAATDQAYTVDRLKGNP-SFRGITDINDALKRARIGGTLNPHELLATSNTIHG 98
Query: 75 VNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASED 134
+ K+ A D ++ L L + LE+ I CID + +LD AS +
Sbjct: 99 SRRI-KRFIAAIHED----EKIDILFNLSDLISEQKPLEDAIRLCID-ETAEVLDSASAE 152
Query: 135 LELIRAERK----RNMENLDSLLK-KVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYL 189
L IR E + R E L+S+++ + A++ Q LIT R R + +KA ++
Sbjct: 153 LSQIRRELRGGEVRIREKLESMIRSQSVAKMLQ-----DQLITIRGDRFVIPVKAEYRSH 207
Query: 190 LPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIK 249
GI + S SGAT F+EP+ V NN E E IL LTA++ + +
Sbjct: 208 F-GGIVHDQSGSGATLFIEPESIVAMNNKLRETRMREEREIEVILQKLTAQVGEQAELLS 266
Query: 250 YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLS 309
+D + ++D FA+A A M P ++ + ++ +HPL+
Sbjct: 267 IDVDLIGQLDFIFAKARLAHVMKASLPRMNDRGYIKLRRG------RHPLI--------- 311
Query: 310 AASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMK 369
P +D VP+D+++ +++TGPNTGGKT ++K
Sbjct: 312 -------P-------------------TDQVVPLDVELGNSYTSIIVTGPNTGGKTVTLK 345
Query: 370 TLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELV 429
T+GL +LM+ +GL++PA+ ++ FD I ADIGD QS+EQ+LSTFS H++ I+ IL +
Sbjct: 346 TIGLLNLMAMSGLFIPAEEGSQMCVFDAIYADIGDEQSIEQSLSTFSSHMTNIIRILSQM 405
Query: 430 SRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVV-TTHYADLSCLKDKDTRFEN 488
+ +SLVL+DE+G+GTDP+EG ALA SIL+++ R+G ++ TTHY++L + N
Sbjct: 406 TPKSLVLLDEVGAGTDPAEGSALAISILEHIH-RMGCRMIATTHYSELKAYAYERKGVIN 464
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF + TL PTYR+L G G SNA IA+ +G I++ A+ V + + R
Sbjct: 465 ASMEFDINTLSPTYRLLVGVPGRSNAFAIAERLGLPGSILEFARGEV-----KEEDQRVE 519
Query: 549 ELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQEL 608
+ SL E R E + A + E+ +L + + E + L+ + L K + +Q +
Sbjct: 520 HMIASLEENRHTAEVEREKAEQVRKEMEELRQRHQQELQKLEEQKDKLVDKARAEARQIV 579
Query: 609 NFAKVQIDTVVQDF 622
+ A+ + + ++ D
Sbjct: 580 DKARSEAEEIIADL 593
>gi|417751918|ref|ZP_12400172.1| MutS2 family protein [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
gi|333772299|gb|EGL49158.1| MutS2 family protein [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
Length = 778
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 244/871 (28%), Positives = 400/871 (45%), Gaps = 151/871 (17%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQPLD--------LSTIEDIAGILNSAVSGQLLS 61
Q+ F K E+ + L + Q +PL+ IE++AGI L S
Sbjct: 8 QLEFDKVKEQFRAYLQTEQGNRELDQLEPLNHHDKIKHYFLEIEEMAGIFVEQHHFALGS 67
Query: 62 PSEICAVRRTLR-----------AVNNVWKKLTEAAEL--DGDSLQRYSPLLELLKNCNF 108
S+I A R L AV + + EA+ D +++Q L L +N
Sbjct: 68 LSDISASMRRLELEADLSIPELLAVKKILQVSAEASRFYVDLENVQ-LQALKRLFENLEL 126
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIR---AERKRNMEN-LDSLLKKVAAQIFQAG 164
L+ + D + AS +LE IR ++++ N L LLKK Q
Sbjct: 127 FPSLQGSLQAINDGGF--VESFASPELEKIRRSISDKEHASRNVLQDLLKK------QGD 178
Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
+ + LI R R + +K + + + G+ ++S+SG T ++EP+ V+ N +L
Sbjct: 179 YLSESLIASRNGRSVLPVKNTFRNKVA-GVVHDISASGNTVYIEPRALVQLNEELTQLQA 237
Query: 225 SEIAEETAILSLLTAEIAKSEREIK---YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 281
E E + +L L+ I R + +++ L F RA + D + +
Sbjct: 238 DERHEVSRVLQTLSDLIRPHSRVLTNNAWILGH-----LDFVRAKYLYMRDNKATVPA-- 290
Query: 282 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
+S D S+ + ++HPLL PV
Sbjct: 291 --ISDDKSLQLLNVRHPLL-------------------------------------QEPV 311
Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
D+ + V+VITGPNTGGKT +KTLGLA LM+++GL + A ++ F I AD
Sbjct: 312 ANDLHFSKDLAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFSGIFAD 371
Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
IGD QS+EQ+LSTFS H++ IV IL +SLVL DE+G+GTDP EG +LA +IL+ LR
Sbjct: 372 IGDEQSIEQSLSTFSSHMTHIVAILNQADADSLVLFDELGAGTDPQEGASLAMAILEQLR 431
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
+ TTHY +L + ENA+ EF +L+PTYR + G G SNA IA+ +
Sbjct: 432 LTNIKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPGRSNAFEIARRL 491
Query: 522 GFDRKIIQRAQ----------KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
G I++ AQ +++E+L + + RK ++ R++E +
Sbjct: 492 GLAEHIVKEAQNMTDTDSDVNRIIEQLEKQTLESRKR------LDHIREVE---QDNLKF 542
Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
+ + LY E +AKD + A L+A+E ++ A + D+++ NQL D +A
Sbjct: 543 NRAVKKLYNEF-SQAKDKEIEKATLEAREI------VDLALAESDSIL----NQLHDKAA 591
Query: 632 DEINSLIKESESAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATV 688
+ + +I E++ + +V P+ S V + P+ G+ + V + G + V
Sbjct: 592 LKPHEVI-EAKGQLKQLV----PEKSLSQNKVLKKAKQLRAPRVGDDIIVTAYGQRGTLV 646
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAG 745
E+ D Q G +++ +K++ ++ + +++ P+ + +++ + G
Sbjct: 647 KELK--DKKWEAQVGLIKMTLKEDEFSLVKVVEEAQK-------PKKKAINVVKKAATGG 697
Query: 746 SSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVK 803
GPR + LDLRG R EEA +LD I A + S + +IHG+GTGV++
Sbjct: 698 --------GPRAR-----LDLRGKRYEEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIR 744
Query: 804 ERVLEILR--NHPRVAKYEQESPMNYGCTVA 832
E V + LR H + Y ++ GCT+A
Sbjct: 745 EAVTKYLRRNKHVKSFGYAPQNAGGSGCTIA 775
>gi|222153669|ref|YP_002562846.1| DNA mismatch repair protein [Streptococcus uberis 0140J]
gi|254766604|sp|B9DVK7.1|MUTS2_STRU0 RecName: Full=MutS2 protein
gi|222114482|emb|CAR43343.1| putative DNA mismatch repair protein [Streptococcus uberis 0140J]
Length = 777
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 212/722 (29%), Positives = 349/722 (48%), Gaps = 114/722 (15%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
AS +L+ +R + N LL+ + + A + + LI R + + +K + ++ +
Sbjct: 147 ASPELDRLRRQIAENERYSRQLLQDILKK--NADYLSESLIASRNGKSVLPVKNTFRHRV 204
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI-- 248
G+ ++S+SG T ++EP+ V+ N +L E E IL L+ + R +
Sbjct: 205 -SGVVHDISASGNTVYIEPRALVQVNEEMTQLLADERHEIARILKELSQLLRPHSRALAN 263
Query: 249 -KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRS 307
+L+ L F RA + ++ I +S D +I + ++HPLL
Sbjct: 264 NAWLLGH-----LDFVRAKYHYLVNNKATI----PKISKDKNIQLLNVRHPLL------- 307
Query: 308 LSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTAS 367
NP+ +D+ ++ + V+VITGPNTGGKT
Sbjct: 308 -------KNPVANDLHFAD-----------------------DLAVIVITGPNTGGKTIM 337
Query: 368 MKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILE 427
+KTLGLA LM ++GL + A ++ FD I ADIGD QS+EQ+LSTFS H++ IVDILE
Sbjct: 338 LKTLGLAQLMGQSGLPILADEGSKIAVFDAIYADIGDEQSIEQSLSTFSSHMTHIVDILE 397
Query: 428 LVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFE 487
+ SLVL DE+G+GTDP EG +LA +IL+ LR + TTHY +L + E
Sbjct: 398 ESNSNSLVLFDELGAGTDPQEGASLAMAILEQLRLTNIKTMATTHYPELKAYGIESDYVE 457
Query: 488 NAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRK 547
NA+ EF ++L+PTYR + G G SNA IA+ +G I++ A+++ +
Sbjct: 458 NASMEFDSQSLKPTYRFMQGVPGRSNAFEIARRLGLAETIVKEAEQMTD---------TD 508
Query: 548 SELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHL-------KAK 599
S++ + + E ER+ L S+ R +D RE+E E +R L K K
Sbjct: 509 SDVNRIIEELERQTLSSRRR---------LDHIREVEQENIKFNRAVKKLYNEFSLAKDK 559
Query: 600 ETQQVQQELNFAKVQID-TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDF 658
E ++ QE A V++ T ++ ++L + + + + +I E++S + ++V P D
Sbjct: 560 EIEKASQEAQ-AIVELALTESEEILSKLHEKAELKPHEII-EAKSKLKSLV----PQRDL 613
Query: 659 SVSETNTSSFT---PQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIR 715
S ++ + P+ G+ + V + G + + +V G+ V KM ++ + +
Sbjct: 614 SKNKVLKKAKKLREPRIGDDIIVSAYGQRGTLIGQVKGNKWEAQVGLIKMTLKEDEFQLV 673
Query: 716 PIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEAS 775
+ +K ++K ++ GPR + LDLRG R EEA
Sbjct: 674 KVEAEAQKPKKQSINMVKKANQN---------------GPRAR-----LDLRGKRYEEAM 713
Query: 776 HQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPMNY---GCT 830
+LD I A + S + +IHG+GTGV++E V + LR H V + +P N GCT
Sbjct: 714 QELDAFIDQALVNNMSQVDIIHGIGTGVIREAVTKYLRRHKHVKSFAY-APQNAGGSGCT 772
Query: 831 VA 832
+A
Sbjct: 773 IA 774
>gi|94985006|ref|YP_604370.1| MutS2 family protein [Deinococcus geothermalis DSM 11300]
gi|94555287|gb|ABF45201.1| DNA mismatch repair protein, MutS family [Deinococcus geothermalis
DSM 11300]
Length = 789
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 234/805 (29%), Positives = 382/805 (47%), Gaps = 112/805 (13%)
Query: 39 LDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSP 98
L L I+DI + A+ G++LS E+ +L +V + + + P
Sbjct: 88 LALGGIQDIRELYTRALEGRVLSGQELLTAAYSLDGAMSVKRAINANSR---------GP 138
Query: 99 LLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLK-KVA 157
L E+ + +EL ++ +D + + D AS L +R R +E L S ++ ++A
Sbjct: 139 LKEVALSLGDHSELVRRVLSALD-RDGAVRDDASHKLRDLR----RRIEPLRSRIRERLA 193
Query: 158 AQIFQ-AGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFN 216
A + + A + + ++T RR R + ++AS + GI ++ S++G TYF+EP N
Sbjct: 194 ATLDRWADVLQEHIVTIRRDRYVLPVQASRVGQV-QGIIVDASATGQTYFVEPAAVTPLN 252
Query: 217 NMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQ-WMDGVC 275
N RL E AE ILS L+ A ++ ++ + V E+DL A+A A+ W
Sbjct: 253 NELTRLILDEEAEVRRILSELSGLFA-ADADVPMTLATVAELDLIAAKARLARDWR---- 307
Query: 276 PILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKG 335
++ + D + ++ +HPL+
Sbjct: 308 ---LNRPEPASDHTYDLREARHPLI----------------------------------- 329
Query: 336 ISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWF 395
+ PVP DI++ +T++++ITGPN GGKTA++KTLGLA LM + G+Y+ A RLP
Sbjct: 330 --EHPVPNDIEL-GQTKLLLITGPNMGGKTATLKTLGLAVLMHQCGMYV-AAARARLPVV 385
Query: 396 DLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATS 455
+L DIGD QS+E +LSTF+ H+ + +L ++LVLIDE+GSGTDP EG ALA +
Sbjct: 386 RDVLVDIGDEQSIEASLSTFASHLKHLRFVLRHAGPDTLVLIDELGSGTDPEEGAALAQA 445
Query: 456 ILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNAL 515
+++ L + ++T+H + L + +NA+ F L TL PTY + G G S AL
Sbjct: 446 LIETLLAQDARGIITSHLSPLKLFALETPGLKNASMSFDLATLSPTYHLQVGQPGRSYAL 505
Query: 516 NIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEI 575
IA+ +G +++ RA +L L P+ + + + L ER +L +Q TA + E
Sbjct: 506 AIARRMGLPPEVLDRAAQL---LGPDAGLMER--MLEGLERERAELATQLNTATTARREA 560
Query: 576 MDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTV-VQDFENQLRDASADEI 634
E + L++R + A+ Q+ + A ++ T+ + E R E+
Sbjct: 561 EAELARARQERETLEQRRNEMLAEAAQKAESLYADAIERVRTLRARAQEESARPRVMQEL 620
Query: 635 NSLIKESESAIAAIVEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
L ++ A RP S E + G QV V + G V+EV GD
Sbjct: 621 RELRTAAQKA--------RPAPPPSREERGDPL---RVGSQVDVPAYG-ATGQVLEVRGD 668
Query: 695 DDTVLVQYGKMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYG 754
D ++VQ G M+V VK+ ++R P K K APR AG+S
Sbjct: 669 D--LVVQLGVMKVGVKRRDVRVKPEPKVK-----APR---------PSFAGTSP------ 706
Query: 755 PRVQTSKNSLDLRGMRVEEASHQLDIALACWES--RSVLFVIHGMGTGVVKERVLEILRN 812
T +N L LRG+ VEEA +L A+A + + L V+HG G GV++ + + L+
Sbjct: 707 ---NTFQNELQLRGLGVEEAVEELRHAIAEAHALKETPLRVVHGKGQGVLRRLLRDYLKT 763
Query: 813 HPRVAKYE--QESPMNYGCTVAYIK 835
RV + + + +G T+ +K
Sbjct: 764 DKRVESFHDAEANQGGHGVTIVNVK 788
>gi|317050976|ref|YP_004112092.1| MutS2 family protein [Desulfurispirillum indicum S5]
gi|316946060|gb|ADU65536.1| MutS2 family protein [Desulfurispirillum indicum S5]
Length = 785
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 235/773 (30%), Positives = 363/773 (46%), Gaps = 105/773 (13%)
Query: 57 GQLLSPSEICAVRRTLRAVNNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKI 116
G+LL P E+ V R L V V L AEL GD+ R + L C +L+ +I
Sbjct: 84 GELLEPGELLQVARFLLVVKGVKAFL---AELAGDTFVRSREMGGDLHPC---ADLKSRI 137
Query: 117 GFCIDCKLLIILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRS 176
CI+ + I D AS +L+ IR E + + +++ + I P+IT RR
Sbjct: 138 ELCIE-EGGQISDSASPNLKRIRRELRTARSRVKKQMERYLSDAQYKDIIIDPIITIRRD 196
Query: 177 RMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSL 236
R + ++++ K + DGI + S+SG T+F+EPK +VE NN L E EE I+
Sbjct: 197 RYVIPLRSNFKGKI-DGIVQDHSASGGTFFVEPKESVELNNRLAELQAGEREEEYRIIRE 255
Query: 237 LTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIK 296
L + R ++ + +D+ A A +A G L H + ++
Sbjct: 256 LGELVQSRLRALQENTALLARMDMYTAFARYAIRYHGT--FLEPSQH----KGCCLPRLR 309
Query: 297 HPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECE-TRVVV 355
HPLL PVP+D + E +++
Sbjct: 310 HPLLKN-------------------------------------PVPVDAYLGGEHPSMLL 332
Query: 356 ITGPNTGGKTASMKTLGLASLMSKAGL-YLPAKNHPRLPWFDLILADIGDHQSLEQNLST 414
ITGPNTGGKT ++K+LGLA L +G+ L ++ + +FD + ADIGD QS+EQNLST
Sbjct: 333 ITGPNTGGKTIALKSLGLAVLSHNSGMPVLCSEVESFMGYFDSVFADIGDEQSIEQNLST 392
Query: 415 FSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYA 474
FSGHI I + + SLVL+DE+GSGTDP EG ALA IL+Y R R V TTH+
Sbjct: 393 FSGHIVNIAHVAGNATERSLVLLDELGSGTDPEEGGALAVGILEYFRQRKCSVVATTHHN 452
Query: 475 DLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL 534
+ NA EF L+TL+PTYRIL+G G+S+AL IA+ G +I++ ++
Sbjct: 453 AVKRYAFTTGGIGNACMEFDLQTLQPTYRILYGYQGESSALAIAQRHGLPGEILETSRNF 512
Query: 535 VERLRPERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDL---YREIEDEAKDLDR 591
+E + E +++ RKLE AR + E +L R + + ++LD
Sbjct: 513 LE--------SQSGEEAKTIAALERKLEKFARRSDQFERESRELKEKLRTVTLQQQNLDS 564
Query: 592 RAAHLKAKETQQVQQELNFAKVQIDTVVQDFEN----QLRDASADEINSLIKESESAIAA 647
A H+ + T Q + L A+ + D ++ ++ Q +A A E N L ++ +
Sbjct: 565 EAQHILQQATMQARDILRQARREADGYIKKLKDTSVRQHAEAQA-EFNQLSRQVYAEADR 623
Query: 648 IVEAH--RPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKM 705
+ +H +P S P G++V V L + T+V G +V V+ G M
Sbjct: 624 MERSHLEKP-----------LSLEP--GQRVFVAKL-QRDGTIVSRSG--KSVQVEVGGM 667
Query: 706 RVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLD 765
++ + + + ++ +P P E R+S S +Y + K L
Sbjct: 668 TIKSRADEL-----FAPRDTQSPTP---AASEGRKSVS--------NYQAPATSVKPELL 711
Query: 766 LRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRV 816
L G RVEEA +L+ I+ A R + ++HG+G+G +K V E L+ P V
Sbjct: 712 LVGKRVEEALDELEKYISSAAVAERESVRIVHGLGSGRLKRAVREYLQQSPLV 764
>gi|374338716|ref|YP_005095433.1| Recombination inhibitory protein MutS2 [Streptococcus macedonicus
ACA-DC 198]
gi|372284833|emb|CCF03137.1| Recombination inhibitory protein MutS2 [Streptococcus macedonicus
ACA-DC 198]
Length = 778
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 212/729 (29%), Positives = 346/729 (47%), Gaps = 121/729 (16%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLL 190
AS +L+ IR + + + +L+ + + QA + + LI R R + +K S++ +
Sbjct: 147 ASSELDRIRRQINHDEGRVRQILQDILKK--QADHLTETLIASRNGRAVLPVKNSYRNRI 204
Query: 191 PDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKY 250
G+ ++S+SG+T ++EP+ V+ N +L E E IL L+ + I+
Sbjct: 205 S-GVVHDISASGSTVYIEPRAVVQLNEEITQLRADERHEMARILRELSNMLRPHTNIIRN 263
Query: 251 LMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSA 310
+ +D A+ F Q + + P LS+ D ++ + +HPLL+
Sbjct: 264 NAWVLGHLDFVRAKFLFMQENNAIVPQLSA------DKTVQLLQTRHPLLID-------- 309
Query: 311 ASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKT 370
PV D+ E V+VITGPNTGGKT +KT
Sbjct: 310 -----------------------------PVANDLHFLNELTVIVITGPNTGGKTVMLKT 340
Query: 371 LGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVS 430
LGLA LM+++GL + A ++ F+ I ADIGD QS+EQ+LSTFS H++ IV+IL
Sbjct: 341 LGLAQLMAQSGLPILADKGSKVAVFNEIFADIGDEQSIEQSLSTFSSHMTNIVEILAAAD 400
Query: 431 RESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAA 490
++SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + ENA+
Sbjct: 401 KDSLVLVDELGAGTDPQEGASLAIAILEHLRLMEIKTMATTHYPELKAYGIETEFVENAS 460
Query: 491 TEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKL----------VERLRP 540
EF ETL PTY + G G SNA IA+ +G I+ A++L +ERL
Sbjct: 461 MEFDTETLSPTYHFMQGVPGRSNAFEIARRLGLAEIIVNEAERLTDSDTDVNRIIERLEE 520
Query: 541 ERQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKE 600
+ + RK ++ +++E + + + LY E AKD + A KA+E
Sbjct: 521 QTHESRKR------LDHIKEVE---QDNLKFNRAVKKLYNEF-SHAKDKELEKASAKAQE 570
Query: 601 TQQVQQELNFAKVQIDTVVQDFE---NQLRDASADEINSLIKESESAIAAIVEAHRPDDD 657
+D + + E L D ++ + + +I E++S + + P+ D
Sbjct: 571 I-------------VDKAIAESEEILKNLHDRASLKPHEVI-EAKSQLKKLA----PEVD 612
Query: 658 FSVSETNTSSF---TPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
S ++ + P+ G+ + V + G + T+V G + VQ G +++ +K++
Sbjct: 613 LSKNKVLKKAKKLRAPRVGDDIVVTAYGQR-GTLVN-QGKNGKWEVQVGLIKMTLKEDEF 670
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQ----SGSAGSSNEEASYGPRVQTSKNSLDLRGMR 770
L K QE+ Q + S GPR + LDLRG R
Sbjct: 671 ----------------TLVKVQEEAQKPKKKQVNVVKKSKKSAGPRAR-----LDLRGKR 709
Query: 771 VEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKYEQESPMN 826
EEA +LD I A + + + +IHG+GTGV++E V + LR H + Y ++
Sbjct: 710 YEEAMQELDEFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLRRNKHVKSFGYAPQNAGG 769
Query: 827 YGCTVAYIK 835
GCT+A ++
Sbjct: 770 SGCTIANLE 778
>gi|169824561|ref|YP_001692172.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
gi|238687754|sp|B0S1P2.1|MUTS2_FINM2 RecName: Full=MutS2 protein
gi|167831366|dbj|BAG08282.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
Length = 783
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 234/845 (27%), Positives = 400/845 (47%), Gaps = 129/845 (15%)
Query: 18 EESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+E ++ L++T A++M+ S P I A I++ + G ++ P + + + L +V
Sbjct: 41 DEIRQSLDETYEAMSMIYKFSNPPIYEIINVKASIMHVSKGGYIV-PEVLLKIGQILNSV 99
Query: 76 NNVWKKLTEAAELDGDSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI---ILDRAS 132
+++ + G+S + Y ++ + L E E + I+ ++ I D AS
Sbjct: 100 HDIKR-------YAGESDENYENCPMIMAMMDSLVE-EPDLVATINNAIISEDEISDNAS 151
Query: 133 EDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPD 192
+L IR +++ EN+ + + + QA + + ++T R R + +K SHK
Sbjct: 152 RNLARIRQTKRQKTENIRDKINSILSSNDQA--LQENIVTMRDDRYVIPVKVSHKSSFK- 208
Query: 193 GIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLM 252
GI + SSSG T ++EP VE NN L E E IL ++ + + I
Sbjct: 209 GIVHDHSSSGQTVYIEPMEVVELNNELRMLEAEEREEIIRILKEISDRVYDVKDSIFVDQ 268
Query: 253 DRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAAS 312
D + ++D FA+A +A +D P L++ + +F ++ +HPLL +
Sbjct: 269 DVLSKLDFIFAKAKYAIEIDATNPKLNTNGYFNFKNA------RHPLLDKKKV------- 315
Query: 313 SNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLG 372
VPI I + + +VITGPNTGGKT ++KT+G
Sbjct: 316 ----------------------------VPISIYLGDDYNTLVITGPNTGGKTVTLKTVG 347
Query: 373 LASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRE 432
L +LM+++G+ +P + + FD I DIGD QS+EQ+LSTFS H+ IV I+ ++
Sbjct: 348 LITLMAQSGILIPVDENSEVAIFDNIFTDIGDEQSIEQSLSTFSAHMKNIVHIVNNITFN 407
Query: 433 SLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATE 492
SLVL DE+G+GTDP+EG ALA +IL+ + + TTHY+ L + +N + E
Sbjct: 408 SLVLFDELGAGTDPTEGAALAIAILRIFLYKSIRTIATTHYSQLKIFALTEKYVKNGSVE 467
Query: 493 FSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQ 552
F + TL PTY++ G G SNA I++ +G D II A++++ Q+ + E
Sbjct: 468 FDVNTLSPTYKLRIGIPGKSNAFEISRRLGLDDDIINNAKEILS------QEDKDFEDVL 521
Query: 553 SLMEERRKL--ESQARTAASLHAEIM--DLY-REIE----------DEAKDLDRRAAHLK 597
S +E ++K E + R + D Y +EIE +EAK+ + +++
Sbjct: 522 SDIESKKKQIDEDKQRQLELKEDLLKLRDRYEKEIEKTKLEKEKIINEAKE-NANEIYMR 580
Query: 598 AK-ETQQVQQELNFAKVQID--TVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRP 654
AK E++++ +L F + + D TV D EN+ N IK+S +
Sbjct: 581 AKEESRELINKLKFLEKESDARTVANDVENKF--------NKRIKKSSNKKL-------- 624
Query: 655 DDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNI 714
++ET+ Q G++V + + ++ T+V P +LVQ G +++ N+
Sbjct: 625 -----LNETSKKQ-KLQLGDEVEILGI-EQQGTIVSEPDKKGDLLVQVGILKINANVKNL 677
Query: 715 RPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRVEEA 774
+ I K++E QS + S + + K+ +DLRG +EEA
Sbjct: 678 KKI----------------KEKEVIQSSKSIKSIIKNKANSDI---KSEIDLRGKNIEEA 718
Query: 775 SHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE--SPMNYGCT 830
++LD I + +IHG GTG++++ + E LR+ RV K E + G T
Sbjct: 719 IYELDKYIDDCVIVGLKKVNIIHGKGTGMLRKGIREYLRSDKRVKKIEDAGYNEGGLGAT 778
Query: 831 VAYIK 835
Y+K
Sbjct: 779 FIYLK 783
>gi|387760548|ref|YP_006067525.1| DNA mismatch repair protein [Streptococcus salivarius 57.I]
gi|339291315|gb|AEJ52662.1| DNA mismatch repair protein [Streptococcus salivarius 57.I]
Length = 782
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 202/727 (27%), Positives = 346/727 (47%), Gaps = 115/727 (15%)
Query: 131 ASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGG--IDKPLITKRRSRMCVGIKASHKY 188
AS +L+ IR R +++ D +++ I + G + + LI R R + +K +++
Sbjct: 147 ASPELQNIR----RQLKSCDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRN 202
Query: 189 LLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREI 248
+ G+ ++SSSG T ++EP+ ++ N +L E E IL L+ ++ I
Sbjct: 203 RIA-GVVHDISSSGNTVYIEPRAVIQLNEEITQLRADERHEMARILHELSNQLRPQAAAI 261
Query: 249 KYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSL 308
+ +D + + Q V P +S + ++ + ++HPLL+
Sbjct: 262 ANNAWILGHMDFIRGKYLYLQDKKAVIPKISD------NQTLQLLNVRHPLLVN------ 309
Query: 309 SAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASM 368
PV D++ + + +VITGPNTGGKT +
Sbjct: 310 -------------------------------PVANDLRFDEDLTAIVITGPNTGGKTVML 338
Query: 369 KTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILEL 428
KTLGLA LM+++GL + A R+ F I ADIGD QS+EQ+LSTFS H++ IV+IL+
Sbjct: 339 KTLGLAQLMAQSGLPILADKGSRVATFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILDA 398
Query: 429 VSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFEN 488
SLVL+DE+G+GTDP EG +LA +IL++LR + TTHY +L + EN
Sbjct: 399 ADSNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVEN 458
Query: 489 AATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKS 548
A+ EF TL PTYR + G G SNA IA+ +G + I++ A+ L + S
Sbjct: 459 ASMEFDTATLSPTYRFMQGVPGRSNAFEIARRLGLNEIIVKEAENLTD---------TDS 509
Query: 549 ELYQSLME-ERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQE 607
++ + + + E + +E+Q R ++ +++E E +R L + + + +E
Sbjct: 510 DVNRIIEQLEAQTVETQKR---------LEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE 560
Query: 608 LNFAKVQIDTVVQDFENQLRDASADEINSLIK----ESESAIAAIVEAH------RPDDD 657
L A+ +I +V D + E +S++K +S+ +++A P D
Sbjct: 561 LEKAQKEIQDMV--------DTALAESDSILKNLHDKSQLKPHEVIDAKGKLKKLSPQVD 612
Query: 658 FSVSET------NTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKK 711
S ++ ++ P+ G+ + V + G + + + Q G +++ +K
Sbjct: 613 LSKNKVLRKAKKEKAARAPRVGDDIIVTAYGQR--GTLTSQAKNGNWEAQVGLIKMTLKA 670
Query: 712 NNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRGMRV 771
+ + R A QQ ++ + +++S GPR + LDLRG R
Sbjct: 671 DEFTLV----RAQA-------EAQQPKKKQINVVKKAKKSSGGPRAR-----LDLRGKRY 714
Query: 772 EEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQ--ESPMNY 827
EEA +LD I A + S + +IHG+GTGV+++ V + LR H V +E +S
Sbjct: 715 EEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGS 774
Query: 828 GCTVAYI 834
GCT+A +
Sbjct: 775 GCTIATL 781
>gi|291535463|emb|CBL08575.1| MutS2 family protein [Roseburia intestinalis M50/1]
Length = 808
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 219/756 (28%), Positives = 338/756 (44%), Gaps = 96/756 (12%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D ++ +PL + ++ C L+E E I D AS L IR + + +
Sbjct: 137 DQIEPLTPLCDEIRRC-ILSEDE-------------IADDASSTLRSIRKSMRGMNDKIR 182
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
+ + + + +IT R R C+ +KA K +P G+ + SSSG+T F+EP
Sbjct: 183 AQMNSMINNTTTRSYLQDAVITMRDGRYCLPVKAEAKSQVP-GMVHDQSSSGSTLFIEPL 241
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V NN L E E IL+ L+ A ++ + + E+D FA+A FAQ
Sbjct: 242 AVVNLNNEYKALLIKEKEEIEVILANLSNLTAGYSMQLHTDYNVLTELDFIFAKAAFAQT 301
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
+GV P ++ D INI+ +HPLL +
Sbjct: 302 YNGVAPTFNT------DGRINIKKGRHPLLDAKKV------------------------- 330
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VPID+++ + +++ITGPNTGGKT S+KT+GL +LM +AGL++PA
Sbjct: 331 ----------VPIDVRLGEDFTLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPASERS 380
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
L F+ + ADIGD QS+EQ+LSTFS H++ I IL V+ SLVL DE+ +GTDP+EG
Sbjct: 381 ELGIFEEVFADIGDEQSIEQSLSTFSSHMTNITRILSQVNDRSLVLFDELCAGTDPTEGA 440
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA SIL L+ + TTHY++L + + ENA EF +E+L PTYR+L G G
Sbjct: 441 ALAISILSKLKLYGARVMATTHYSELKVFALQTSGVENACCEFDVESLSPTYRLLIGIPG 500
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
SNA I+ +G II+ A+ R +L L + R +E +
Sbjct: 501 KSNAFAISTKLGLGEDIIEDAKG-----RISENDMNFEDLLADLEKSRITIEKEQLEINQ 555
Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
EI L ++E + + LD + + +Q + AK D +++F N+ A
Sbjct: 556 YKEEIQKLKEQLEQKQERLDASRDKILREANEQAYNIIKEAKDLADETIRNF-NKYGTAH 614
Query: 631 ADEINSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 688
A ++ + KE + A + D + + + + G++V V S+ TV
Sbjct: 615 A-PVSEMEKERTKLRDKMNNAQKKMSDQKKNAAPNHKIPKKLRIGDRVKVISMNLN-GTV 672
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNI-----RPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
+P + VQ G +R V N++ P SK+ G
Sbjct: 673 HSLPNAKGDLYVQMGILRSLVNINDLILLEEETSPTSKK------------------YGR 714
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
G+ + S V T N L G +EA LD L A + ++HG GTG
Sbjct: 715 TGAGKIKMSKSASVSTEIN---LIGKTTDEAIALLDKYLDDAYLAHIPSVRIVHGKGTGA 771
Query: 802 VKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
++ V L+ V + + + G T+A K
Sbjct: 772 LRNAVQAHLKRLKYVKSFHLGEYGEGDAGVTIAEFK 807
>gi|302380376|ref|ZP_07268846.1| putative recombination and DNA strand exchange inhibitor protein
[Finegoldia magna ACS-171-V-Col3]
gi|302311866|gb|EFK93877.1| putative recombination and DNA strand exchange inhibitor protein
[Finegoldia magna ACS-171-V-Col3]
Length = 783
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 236/851 (27%), Positives = 398/851 (46%), Gaps = 141/851 (16%)
Query: 18 EESQKLLNQTSAALAMMQ--SQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
+E ++ L++T A++M+ S P I A I++ + G ++ P + + + L +V
Sbjct: 41 DEIRQSLDETYEAMSMIYKFSNPPIYEIINVKASIMHVSKGGYIV-PEVLLKIGQILNSV 99
Query: 76 NNVWKKLTEAAELDG---------DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLI 126
+++ + E+ E DSL L+ + N ++E E
Sbjct: 100 HDIKRYAGESDENHENHPMIMAMMDSLVEEPDLVATINNA-IISEDE------------- 145
Query: 127 ILDRASEDLELIRAERKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASH 186
I D AS +L IR +++ EN+ + + + QA + + ++T R R + +K SH
Sbjct: 146 ISDNASRNLARIRQTKRQKTENIRDKINSILSSNDQA--LQENIVTMRDDRYVIPVKVSH 203
Query: 187 KYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSER 246
K GI + SSSG T ++EP VE NN L E E IL ++ + +
Sbjct: 204 KSSFK-GIVHDHSSSGQTVYIEPMEVVELNNELRMLEAEEREEIIRILKEISDRVYDVKD 262
Query: 247 EIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLR 306
I D + ++D FA+A +A +D P L++ + +F ++ +HPLL +
Sbjct: 263 SIFVDQDVLSKLDFIFAKAKYAIEIDATNPKLNTNGYFNFKNA------RHPLLDKKKV- 315
Query: 307 SLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTA 366
VPI I + + +VITGPNTGGKT
Sbjct: 316 ----------------------------------VPISIYLGDDYNTLVITGPNTGGKTV 341
Query: 367 SMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDIL 426
++KT+GL +LM+++G+ +P + + FD I DIGD QS+EQ+LSTFS H+ IV I+
Sbjct: 342 TLKTVGLITLMAQSGILIPVDENSEVAIFDNIFTDIGDEQSIEQSLSTFSAHMKNIVHIV 401
Query: 427 ELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRF 486
++ SLVL DE+G+GTDP+EG ALA +IL+ + + TTHY+ L +
Sbjct: 402 NNITFNSLVLFDELGAGTDPTEGAALAIAILRIFLYKSIRTIATTHYSQLKIFALTEKYV 461
Query: 487 ENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHR 546
+N + EF + TL PTY++ G G SNA I++ +G D II A++++ Q+ +
Sbjct: 462 KNGSVEFDVNTLSPTYKLRIGIPGKSNAFEISRRLGLDDDIINNAKEILS------QEDK 515
Query: 547 KSELYQSLMEERRKL--ESQARTAASLHAEIM--DLY-REIE----------DEAKDLDR 591
E S +E ++K E + R + D Y +EIE +EAK+ +
Sbjct: 516 DFEDVLSDIESKKKQIDEDKQRQLELKEDLLKLRDRYEKEIEKTKLEKEKIINEAKE-NA 574
Query: 592 RAAHLKAK-ETQQVQQELNFAKVQID--TVVQDFENQLRDASADEINSLIKESESAIAAI 648
+++AK E++++ +L F + + D TV D EN+ N IK+S +
Sbjct: 575 NEIYMRAKEESRELINKLKFLEKESDARTVANDVENKF--------NKRIKKSSNKKL-- 624
Query: 649 VEAHRPDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVR 708
++ET+ Q G++V + + ++ T+V P +LVQ G +++
Sbjct: 625 -----------LNETSKKQ-KLQLGDEVEILGI-EQQGTIVSEPDKKGDLLVQVGILKIN 671
Query: 709 VKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNSLDLRG 768
N++ I K++E QS + S + + K+ +DLRG
Sbjct: 672 ANVKNLKKI----------------KEKEVIQSSKSIKSIIKNKANSDI---KSEIDLRG 712
Query: 769 MRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQE--SP 824
+EEA ++LD I + +IHG GTG++++ + E LR+ RV K E +
Sbjct: 713 KNIEEAIYELDKYIDDCVIVGLKKVNIIHGKGTGMLRKGIREYLRSDKRVKKIEDAGYNE 772
Query: 825 MNYGCTVAYIK 835
G T Y+K
Sbjct: 773 GGLGATFIYLK 783
>gi|422759830|ref|ZP_16813592.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
gi|322412665|gb|EFY03573.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 778
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 243/869 (27%), Positives = 396/869 (45%), Gaps = 147/869 (16%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQPLDLST--------IEDIAGILNSAVSGQLLS 61
Q+ F K E+ + L + Q +PL+ IE++AGI L S
Sbjct: 8 QLEFDKVKEQFRAYLQTEQGNRELDQLEPLNYHEKIKHYFLEIEEMAGIFVEHHHFALGS 67
Query: 62 PSEICAVRRTLR-----------AVNNVWKKLTEAAEL--DGDSLQRYSPLLELLKNCNF 108
S+I A R L AV + + EA+ D +++Q L L +N
Sbjct: 68 LSDISASMRRLELEADLSIPELLAVKKILQVSAEASRFYVDLENVQ-LQALKRLFENLEL 126
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIR---AERKRNMEN-LDSLLKKVAAQIFQAG 164
L+ + D + AS +LE IR ++++ N L LLKK Q
Sbjct: 127 FLSLQGSLQAINDGGF--VESFASPELEKIRRSISDKEHASRNVLQDLLKK------QGD 178
Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
+ + LI R R + +K + + + G+ ++S+SG T ++EP+ V+ N +L
Sbjct: 179 YLSESLIASRNGRSVLPVKNTFRNKVA-GVVHDISASGNTVYIEPRALVQLNEELTQLQA 237
Query: 225 SEIAEETAILSLLTAEIAKSEREIK---YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 281
E E + +L L+ I R + +++ L F RA + D + +
Sbjct: 238 DERHEVSRVLQTLSDLIRPHSRVLTNNAWILGH-----LDFVRAKYLYMRDNKATVPA-- 290
Query: 282 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
+S D S+ + ++HPLL PV
Sbjct: 291 --ISDDKSLQLLNVRHPLL-------------------------------------QEPV 311
Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
D+ + V+VITGPNTGGKT +KTLGLA LM+++GL + A ++ F I AD
Sbjct: 312 ANDLHFSKDLAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFSGIFAD 371
Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
IGD QS+EQ+LSTFS H++ IV IL +SLVL DE+G+GTDP EG +LA +IL+ LR
Sbjct: 372 IGDEQSIEQSLSTFSSHMTHIVAILNQADADSLVLFDELGAGTDPQEGASLAMAILEQLR 431
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
+ TTHY +L + ENA+ EF +L+PTYR + G G SNA IA+ +
Sbjct: 432 LTNVKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPGRSNAFEIARRL 491
Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSELYQSLME-ERRKLESQARTAASLHAEIMDLYR 580
G I++ AQ + + S++ + + + ER+ LES+ R +D R
Sbjct: 492 GLAEHIVKEAQTMTD---------TDSDVNRIIEQLERQTLESRKR---------LDHIR 533
Query: 581 EIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVV-------QDFENQLRDASADE 633
E+E + +R L + +Q +E+ A ++ +V NQL D +A +
Sbjct: 534 EVEQDNLKFNRAVKKLYNEFSQAKDKEIEKATLEAREIVDLALAESDSILNQLHDKAALK 593
Query: 634 INSLIKESESAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVE 690
+ +I E++ + +V P+ S V + P+ G+ + V + G + V E
Sbjct: 594 PHEVI-EAKGQLKQLV----PEKSLSQNKVLKKAKQLRAPRVGDDIIVTAYGQRGTLVKE 648
Query: 691 VPGDDDTVLVQYGKMRVRVKKNN---IRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSS 747
+ D Q G +++ +K++ ++ + +++ P+ + +++ + G
Sbjct: 649 LK--DKKWEAQVGLIKMTLKEDEFSLVKVVEEAQK-------PKKKAINVVKKAATGG-- 697
Query: 748 NEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKER 805
GPR + LDLRG R EEA +LD I A + S + +IHG+GTGV++E
Sbjct: 698 ------GPRAR-----LDLRGKRYEEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIREA 746
Query: 806 VLEILR--NHPRVAKYEQESPMNYGCTVA 832
V + LR H + Y ++ GCT+A
Sbjct: 747 VTKYLRRNKHVKSFGYAPQNAGGSGCTIA 775
>gi|240146928|ref|ZP_04745529.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
gi|257200911|gb|EEU99195.1| DNA mismatch repair protein MutS [Roseburia intestinalis L1-82]
Length = 808
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 219/756 (28%), Positives = 338/756 (44%), Gaps = 96/756 (12%)
Query: 91 DSLQRYSPLLELLKNCNFLTELEEKIGFCIDCKLLIILDRASEDLELIRAERKRNMENLD 150
D ++ +PL + ++ C L+E E I D AS L IR + + +
Sbjct: 137 DQIEPLTPLCDEIRRC-ILSEDE-------------IADDASSTLRSIRKSMRGMNDKIR 182
Query: 151 SLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPK 210
+ + + + +IT R R C+ +KA K +P G+ + SSSG+T F+EP
Sbjct: 183 AQMNSMINNTTTRSYLQDAVITMRDGRYCLPVKAEAKSQVP-GMVHDQSSSGSTLFIEPL 241
Query: 211 GAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKSEREIKYLMDRVLEIDLAFARAGFAQW 270
V NN L E E IL+ L+ A ++ + + E+D FA+A FAQ
Sbjct: 242 AVVNLNNEYKALLIKEKEEIEVILANLSNLTAGYSMQLHTDYNVLTELDFIFAKAAFAQT 301
Query: 271 MDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVG 330
+GV P ++ D INI+ +HPLL +
Sbjct: 302 YNGVAPTFNT------DGRINIKKGRHPLLDAKKV------------------------- 330
Query: 331 SLSKGISDFPVPIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHP 390
VPID+++ + +++ITGPNTGGKT S+KT+GL +LM +AGL++PA
Sbjct: 331 ----------VPIDVRLGEDFTLLIITGPNTGGKTVSLKTVGLLTLMGQAGLHIPASERS 380
Query: 391 RLPWFDLILADIGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGV 450
L F+ + ADIGD QS+EQ+LSTFS H++ I IL V+ SLVL DE+ +GTDP+EG
Sbjct: 381 ELGIFEEVFADIGDEQSIEQSLSTFSSHMTNITRILSQVNDRSLVLFDELCAGTDPTEGA 440
Query: 451 ALATSILQYLRDRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTG 510
ALA SIL L+ + TTHY++L + + ENA EF +E+L PTYR+L G G
Sbjct: 441 ALAISILSKLKLYGARVMATTHYSELKVFALQTSGVENACCEFDVESLSPTYRLLIGIPG 500
Query: 511 DSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQHRKSELYQSLMEERRKLESQARTAAS 570
SNA I+ +G II+ A+ R +L L + R +E +
Sbjct: 501 KSNAFAISTKLGLSEDIIEDAKG-----RISENDMNFEDLLADLEKSRITIEKEQLEINQ 555
Query: 571 LHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDAS 630
EI L ++E + + LD + + +Q + AK D +++F N+ A
Sbjct: 556 YKEEIQKLKEQLEQKQERLDASRDKILREANEQAYNIIREAKDLADETIRNF-NKYGTAH 614
Query: 631 ADEINSLIKESESAIAAIVEAHR--PDDDFSVSETNTSSFTPQFGEQVHVKSLGDKLATV 688
A ++ + KE + A + D + + + + G++V V S+ TV
Sbjct: 615 A-PVSEMEKERTKLRDKMNNAQKKMSDQKKNAAPNHKIPKKLRIGDRVKVISMNLN-GTV 672
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNI-----RPIPNSKRKNAANPAPRLRKQQEDRQSGS 743
+P + VQ G +R V N++ P SK+ G
Sbjct: 673 HSLPNAKGDLYVQMGILRSLVNINDLILLEEETSPTSKK------------------YGR 714
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLDIAL--ACWESRSVLFVIHGMGTGV 801
G+ + S V T N L G +EA LD L A + ++HG GTG
Sbjct: 715 TGAGKIKMSKSASVSTEIN---LIGKTTDEAIALLDKYLDDAYLAHIPSVRIVHGKGTGA 771
Query: 802 VKERVLEILRNHPRVAKYE--QESPMNYGCTVAYIK 835
++ V L+ V + + + G T+A K
Sbjct: 772 LRNAVQAHLKRLKYVKSFHLGEYGEGDAGVTIAEFK 807
>gi|417927758|ref|ZP_12571146.1| MutS2 family protein [Streptococcus dysgalactiae subsp. equisimilis
SK1250]
gi|340765632|gb|EGR88158.1| MutS2 family protein [Streptococcus dysgalactiae subsp. equisimilis
SK1250]
Length = 778
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 246/867 (28%), Positives = 395/867 (45%), Gaps = 143/867 (16%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQPLD--------LSTIEDIAGILNSAVSGQLLS 61
Q+ F K E+ + L + Q +PL+ IE++AGI L S
Sbjct: 8 QLEFDKVKEQFRAYLQTEQGNRELDQLEPLNHHDKIKHYFLEIEEMAGIFVEQHHFALGS 67
Query: 62 PSEICAVRRTLR-----------AVNNVWKKLTEAAEL--DGDSLQRYSPLLELLKNCNF 108
S+I A R L AV + + EA+ D +++Q L L +N
Sbjct: 68 LSDISASMRRLELEADLSIPELLAVKKILQVSAEASRFYVDLENVQ-LQALKRLFENLEL 126
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIR---AERKRNMEN-LDSLLKKVAAQIFQAG 164
L+ + D + AS +LE IR ++++ N L LLKK Q
Sbjct: 127 FPSLQGSLQAINDGGF--VESFASPELEKIRRSISDKEHASRNVLQDLLKK------QGD 178
Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
+ + LI R R + +K + + + G+ ++S+SG T ++EP+ V+ N +L
Sbjct: 179 YLSESLIASRNGRSVLPVKNTFRNKVA-GVVHDISASGNTVYIEPRALVQLNEELTQLQA 237
Query: 225 SEIAEETAILSLLTAEIAKSEREIK---YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 281
E E + +L L+ I R + +++ L F RA + D + +
Sbjct: 238 DERHEVSRVLQALSDLIRPHSRALTNNAWILGH-----LDFIRAKYLYMRDNKATVPA-- 290
Query: 282 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
+S D S+ + ++HPLL PV
Sbjct: 291 --ISDDKSLQLLNVRHPLL-------------------------------------QEPV 311
Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
D+ + V+VITGPNTGGKT +KTLGLA LM+++GL + A ++ F I AD
Sbjct: 312 ANDLHFSKDLAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVTVFSGIFAD 371
Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
IGD QS+EQ+LSTFS H++ IV IL +SLVL DE+G+GTDP EG +LA +IL+ LR
Sbjct: 372 IGDEQSIEQSLSTFSSHMTHIVAILNQADADSLVLFDELGAGTDPQEGASLAMAILEQLR 431
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
+ TTHY +L + ENA+ EF +L+PTYR + G G SNA IA+ +
Sbjct: 432 LTNIKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPGRSNAFEIARRL 491
Query: 522 GFDRKIIQRAQKLVERLRPERQQHRKSE-LYQSLMEERRKLE---SQARTAASLHAEIMD 577
G I++ AQ + + + +R E L + +E R++L+ + + +
Sbjct: 492 GLAEHIVKEAQNMTD---TDSDVNRIIEQLEKQTLESRKRLDYIREVEQDNLKFNRAVKK 548
Query: 578 LYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASADEINSL 637
LY E +AKD + A L+A+E ++ A + D+++ NQL D +A + + +
Sbjct: 549 LYNEF-SQAKDKEIEKATLEAREI------VDLALAESDSIL----NQLHDKAALKPHEV 597
Query: 638 IKESESAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATVVEVPGD 694
I E++ + +V P+ S V + P+ G+ + V + G + V E+
Sbjct: 598 I-EAKGQLKQLV----PEKSLSQNKVLKKAKQLRAPRVGDDIIVTAYGQRGTLVKELK-- 650
Query: 695 DDTVLVQYGKMRVRVKKNNIRPIP-----NSKRKNAANPAPRLRKQQEDRQSGSAGSSNE 749
D Q G +++ +K++ + +K A N +++ + G
Sbjct: 651 DKKWEAQVGLIKMTLKEDEFSLVKVVEEVQKPKKKAINVV---------KKAATGG---- 697
Query: 750 EASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVL 807
GPR + LDLRG R EEA +LD I A + S + +IHG+GTGV++E V
Sbjct: 698 ----GPRAR-----LDLRGKRYEEAMQELDAFIDQALLNNMSQVDIIHGIGTGVIREAVT 748
Query: 808 EILR--NHPRVAKYEQESPMNYGCTVA 832
+ LR H + Y ++ GCT+A
Sbjct: 749 KYLRRNKHVKSFGYAPQNAGGSGCTIA 775
>gi|386317717|ref|YP_006013881.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|410495667|ref|YP_006905513.1| DNA mismatch repair protein mutS [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|323128004|gb|ADX25301.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|410440827|emb|CCI63455.1| DNA mismatch repair protein mutS [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 778
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 246/873 (28%), Positives = 396/873 (45%), Gaps = 155/873 (17%)
Query: 10 QIPFGKSLEESQKLLNQTSAALAMMQSQPLD--------LSTIEDIAGILNSAVSGQLLS 61
Q+ F K E+ + L + Q +PL+ IE++AGI L S
Sbjct: 8 QLEFDKVKEQFRAYLQTEQGNRELDQLEPLNHHDKIKHYFLEIEEMAGIFVEQHHFALGS 67
Query: 62 PSEICAVRRTLR-----------AVNNVWKKLTEAAEL--DGDSLQRYSPLLELLKNCNF 108
S+I A R L AV + + EA+ D +++Q L L +N
Sbjct: 68 LSDISASMRRLELEADLSIPELLAVKKILQVSAEASRFYVDLENVQ-LQALKRLFENLEL 126
Query: 109 LTELEEKIGFCIDCKLLIILDRASEDLELIR---AERKRNMEN-LDSLLKKVAAQIFQAG 164
L+ + D + AS +LE IR ++++ N L LLKK Q
Sbjct: 127 FPSLQGSLQAINDGGF--VESFASPELEKIRRSISDKEHASRNVLQDLLKK------QGD 178
Query: 165 GIDKPLITKRRSRMCVGIKASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSN 224
+ + LI R R + +K + + + G+ ++S+SG T ++EP+ V+ N +L
Sbjct: 179 YLSESLIASRNGRSVLPVKNTFRNKVA-GVVHDISASGNTVYIEPRALVQLNEELTQLQA 237
Query: 225 SEIAEETAILSLLTAEIAKSEREIK---YLMDRVLEIDLAFARAGFAQWMDGVCPILSSQ 281
E E + +L L+ I R + +++ L F RA + D + +
Sbjct: 238 DERHEVSRVLQALSDLIRPHSRALTNNAWILGH-----LDFIRAKYLYMRDNKATVPA-- 290
Query: 282 SHVSFDSSINIEGIKHPLLLGSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPV 341
+S D S+ + ++HPLL PV
Sbjct: 291 --ISDDKSLQLLNVRHPLL-------------------------------------QEPV 311
Query: 342 PIDIKVECETRVVVITGPNTGGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILAD 401
D+ + V+VITGPNTGGKT +KTLGLA LM+++GL + A ++ F I AD
Sbjct: 312 ANDLHFSKDLAVIVITGPNTGGKTIMLKTLGLAQLMAQSGLPILADKGSKVAVFSGIFAD 371
Query: 402 IGDHQSLEQNLSTFSGHISRIVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLR 461
IGD QS+EQ+LSTFS H++ IV IL +SLVL DE+G+GTDP EG +LA +IL+ LR
Sbjct: 372 IGDEQSIEQSLSTFSSHMTHIVAILNQADADSLVLFDELGAGTDPQEGASLAMAILEQLR 431
Query: 462 DRVGLAVVTTHYADLSCLKDKDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSI 521
+ TTHY +L + ENA+ EF +L+PTYR + G G SNA IA+ +
Sbjct: 432 LTNIKTMATTHYPELKAYGIETPYVENASMEFDSMSLKPTYRFMQGVPGRSNAFEIARRL 491
Query: 522 GFDRKIIQRAQ----------KLVERLRPERQQHRKSELYQSLMEERRKLESQARTAASL 571
G I++ AQ +++E+L + + RK ++ R++E +
Sbjct: 492 GLAEHIVKEAQNMTDTDSDVNRIIEQLEKQTLESRKR------LDHIREVE---QDNLKF 542
Query: 572 HAEIMDLYREIEDEAKDLDRRAAHLKAKETQQVQQELNFAKVQIDTVVQDFENQLRDASA 631
+ + LY E +AKD + A L+A+E ++ A + D+++ NQL D +A
Sbjct: 543 NRAVKKLYNEF-SQAKDKEIEKATLEAREI------VDLALAESDSIL----NQLHDKAA 591
Query: 632 DEINSLIKESESAIAAIVEAHRPDDDFS---VSETNTSSFTPQFGEQVHVKSLGDKLATV 688
+ + +I E++ + +V P+ S V + P+ G+ + V + G + V
Sbjct: 592 LKPHEVI-EAKGQLKQLV----PEKSLSQNKVLKKAKQLRAPRVGDDIIVTAYGQRGTLV 646
Query: 689 VEVPGDDDTVLVQYGKMRVRVKKNNIRPIP-----NSKRKNAANPAPRLRKQQEDRQSGS 743
E+ D Q G +++ +K++ + +K A N +++ +
Sbjct: 647 KELK--DKKWEAQVGLIKMTLKEDEFSLVKVVEEVQKPKKKAINVV---------KKAAT 695
Query: 744 AGSSNEEASYGPRVQTSKNSLDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGV 801
G GPR + LDLRG R EEA +LD I A + S + +IHG+GTGV
Sbjct: 696 GG--------GPRAR-----LDLRGKRYEEAMQELDAFIDQALLNNMSQVDIIHGIGTGV 742
Query: 802 VKERVLEILR--NHPRVAKYEQESPMNYGCTVA 832
++E V + LR H + Y ++ GCT+A
Sbjct: 743 IREAVTKYLRRNKHVKSFGYAPQNAGGSGCTIA 775
>gi|297565601|ref|YP_003684573.1| MutS2 family protein [Meiothermus silvanus DSM 9946]
gi|296850050|gb|ADH63065.1| MutS2 family protein [Meiothermus silvanus DSM 9946]
Length = 761
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 248/838 (29%), Positives = 388/838 (46%), Gaps = 133/838 (15%)
Query: 16 SLEESQKLLNQTSAALAMMQSQPLDLSTIEDIAGILNSAVSGQLLSPSEICAVRRTLRAV 75
SLEE+ L Q + A A+ S P L I DI L +A G+ LS E+ ++ TL A
Sbjct: 38 SLEEA--LAQQATIAEAL--SYPYRLGGISDIRAPLATAREGKRLSGMELLSIAHTLEAA 93
Query: 76 NNVWKKLTEAAELDGD------SLQRYSPLLELL-KNCNFLTELEEKIGFCIDCKLLIIL 128
+ +L E E+ QR S L E + ++ + + E + F K
Sbjct: 94 AALKHELLEIGEVKPHQRPGHAGTQRLSALAERIGEHTLYRRRVAESLDFDGSVK----- 148
Query: 129 DRASEDLELIRAE----RKRNMENLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGIKA 184
D AS L IR R++ + L S++ + + I + IT RR R + +KA
Sbjct: 149 DSASPRLSQIRKRLGPLREQIQQRLYSIMDRAGS------AIQERYITLRRDRYVIPVKA 202
Query: 185 SHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIAKS 244
S ++ +P GI L+ S +G T F+EP V NN L E AE IL LT +A+
Sbjct: 203 SFQHQVP-GIVLDQSDTGVTVFIEPSSVVPLNNQLYSLRLEEEAEIARILFELTGLLAQD 261
Query: 245 EREIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLLGSS 304
+ + L A A W G+ S+ + + + ++E + HPL+ G+
Sbjct: 262 PQIDQTLAALTELDLARAAAALTEDW--GL-----SKPRFNTEGTYHLEQVWHPLIPGA- 313
Query: 305 LRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNTGGK 364
V D+++ R++++TGPN GGK
Sbjct: 314 ------------------------------------VANDLELSQTARLLLLTGPNMGGK 337
Query: 365 TASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISRIVD 424
TA +KTLGLA LM+++GLY+ AK L + D + DIGD QSLE +LSTF+ H+ R+
Sbjct: 338 TALLKTLGLAVLMAQSGLYVAAKA-ANLAFPDKVFVDIGDEQSLEASLSTFAAHLLRLKG 396
Query: 425 ILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKDKDT 484
+L + +SLVLIDE+GSGTDP EG ALA + L+ L +R ++TTH + L +
Sbjct: 397 VLAEATPQSLVLIDELGSGTDPEEGAALAQAFLEALLERGARGLITTHLSPLKAFAQETP 456
Query: 485 RFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPERQQ 544
NA+ F LE L PTY+++ G+ G S AL IA+ +GF + RA+ L L PE
Sbjct: 457 GVHNASMRFDLERLAPTYQLVVGTPGRSYALAIARRLGFPEALNVRAEAL---LGPE--G 511
Query: 545 HRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKETQQV 604
R L +L ER L + A L + E++ + +DL+ Q
Sbjct: 512 GRVERLLAALEAERESLRQRLAEAEQLQGQARREREELQAQLRDLE-----------QNR 560
Query: 605 QQELNFAKVQIDTVVQDFENQLRDASADEINSLIKESESAIAAIVEAHRPDDDFSVSETN 664
QQ L A+ + + +V + + +LR L +SE A+ E + + +
Sbjct: 561 QQLLEEARREAEMLVSEAQERLRQV------RLRGKSEGQGKALQELMQLRGRYQKAPKP 614
Query: 665 TSSFTPQF--GEQVHVKSLGDKLATVVEVPGDDDTVLVQYGKMRVRVKKNNIRPIPNSKR 722
+F PQ G VHV + A V+EV G + LVQ G +++ + ++++ +
Sbjct: 615 QPTF-PQVTAGATVHVPEYNAQ-ARVLEVRGSE--ALVQMGSVKMSLPLSSLQVL----- 665
Query: 723 KNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS-LDLRGMRVEEASHQLDIA 781
AP+ G G G RV+++ ++ L+LRGM V+EA +D
Sbjct: 666 -----QAPQ----------GHGG--------GARVKSNFDAELNLRGMTVDEALLAIDDF 702
Query: 782 LACWES--RSVLFVIHGMGTGVVKERVLEILRNHPRVAKYEQESPM--NYGCTVAYIK 835
L +S + + ++HG GTG ++ + E LR RV + P +G TV +++
Sbjct: 703 LTEAKSLGETPVRLLHGKGTGALRNAIREALRRDKRVETFHDAVPYEGGHGVTVVHLR 760
>gi|295692280|ref|YP_003600890.1| DNA mismatch repair protein muts2 [Lactobacillus crispatus ST1]
gi|423318185|ref|ZP_17296082.1| MutS2 protein [Lactobacillus crispatus FB049-03]
gi|423320499|ref|ZP_17298371.1| MutS2 protein [Lactobacillus crispatus FB077-07]
gi|295030386|emb|CBL49865.1| DNA mismatch repair protein MutS2 [Lactobacillus crispatus ST1]
gi|405596674|gb|EKB70007.1| MutS2 protein [Lactobacillus crispatus FB049-03]
gi|405605103|gb|EKB78170.1| MutS2 protein [Lactobacillus crispatus FB077-07]
Length = 785
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 214/736 (29%), Positives = 347/736 (47%), Gaps = 123/736 (16%)
Query: 127 ILDRASEDLELIRAERKRNME----NLDSLLKKVAAQIFQAGGIDKPLITKRRSRMCVGI 182
+LD AS +L +R + + N E +D+ K +++ + + ++T R R + +
Sbjct: 146 VLDTASHELARLRHDIRSNEEEIKNKMDAYTKGNSSKY-----LSEQIVTIRDDRYVIPV 200
Query: 183 KASHKYLLPDGIALNVSSSGATYFMEPKGAVEFNNMEVRLSNSEIAEETAILSLLTAEIA 242
K ++ G+ + S+SG T F+EP+ + NN + L E E IL L+ +A
Sbjct: 201 KQEYRAKF-GGVVHDQSASGQTLFIEPEAVLNLNNRQQNLIAQEKQEIRNILKHLS-NLA 258
Query: 243 KSE-REIKYLMDRVLEIDLAFARAGFAQWMDGVCPILSSQSHVSFDSSINIEGIKHPLLL 301
+ E + + + E+D A+A A+ M P L+ D S+N+ +HPL+
Sbjct: 259 REEITSLNNIAAALTELDFLQAKAKLAKEMKASEPRLTQ------DHSLNLLKARHPLI- 311
Query: 302 GSSLRSLSAASSNSNPLKSDVENSEMTVGSLSKGISDFPVPIDIKVECETRVVVITGPNT 361
+P K VP DI++ E ++ITGPNT
Sbjct: 312 --------------DPEKV--------------------VPNDIRLGGEFDTMLITGPNT 337
Query: 362 GGKTASMKTLGLASLMSKAGLYLPAKNHPRLPWFDLILADIGDHQSLEQNLSTFSGHISR 421
GGKT ++KT GL LM+++GL++PA+ ++ F + ADIGD QS+EQ+LSTFS HI+
Sbjct: 338 GGKTITLKTAGLLQLMAQSGLFIPAEEGSKVGVFKQVYADIGDEQSIEQSLSTFSSHIND 397
Query: 422 IVDILELVSRESLVLIDEIGSGTDPSEGVALATSILQYLRDRVGLAVVTTHYADLSCLKD 481
I+ I++ V E+LVLIDEIG+GTDP EG +LA SIL +LR + +VTTHY +L
Sbjct: 398 IIAIMKNVDSETLVLIDEIGAGTDPEEGASLAISILDFLRKKDAKIMVTTHYPELKLYGY 457
Query: 482 KDTRFENAATEFSLETLRPTYRILWGSTGDSNALNIAKSIGFDRKIIQRAQKLVERLRPE 541
R NA+ EF L+TL PTY + G G SNA IA+ +G +++ AQ L+
Sbjct: 458 NRPRTTNASMEFDLKTLSPTYHLQIGIPGHSNAFAIARKLGMREDVVKNAQNLM------ 511
Query: 542 RQQHRKSELYQSLMEERRKLESQARTAASLHAEIMDLYREIEDEAKDLDRRAAHLKAKET 601
S++ + + KL +Q + A + D ++ L+++
Sbjct: 512 --SDEDSDINKMIT----KLNTQTKAATVARNRLQTSL----DRSQKLEQKLQQALDWYN 561
Query: 602 QQVQQELNFAKVQIDTVVQDFENQLRDASADEI--------NSLIKESESAIAAIVEAHR 653
Q+VQ++L+FA+ + + VV R ADEI N +KE++ I+EA
Sbjct: 562 QRVQKQLDFAQERANEVVAK-----RRKKADEIIAQLEKQKNMGVKENK-----IIEAKG 611
Query: 654 PDDDFSVSETNTS-SFTPQFGEQVHVKSLGDKLATVVEVPGDDDTVL---------VQYG 703
+ N + + Q ++ H S+GD++ + G T+ VQ G
Sbjct: 612 ELNSLERQANNLAHNKVLQREKRRHHVSVGDRVKVLSY--GQTGTITKKLSEHEYEVQMG 669
Query: 704 KMRVRVKKNNIRPIPNSKRKNAANPAPRLRKQQEDRQSGSAGSSNEEASYGPRVQTSKNS 763
++V+V +I I ++ + P +R A+ R + +
Sbjct: 670 IIKVKVSDRDIERI---EKGESTKPRQTVR-----------------ATSAVRRSNAHSE 709
Query: 764 LDLRGMRVEEASHQLD--IALACWESRSVLFVIHGMGTGVVKERVLEILR--NHPRVAKY 819
LDLRG R +EA LD I + +IHG+GTG +++ V + LR NH + Y
Sbjct: 710 LDLRGQRYDEAMTNLDRYIDSVLLAGLDTVTIIHGIGTGAIRKGVWQYLRSSNHVKNFNY 769
Query: 820 EQESPMNYGCTVAYIK 835
+ G T+ +K
Sbjct: 770 APANEGGNGATIVQLK 785
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,768,996,804
Number of Sequences: 23463169
Number of extensions: 472142915
Number of successful extensions: 1939186
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8766
Number of HSP's successfully gapped in prelim test: 3289
Number of HSP's that attempted gapping in prelim test: 1906271
Number of HSP's gapped (non-prelim): 20482
length of query: 835
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 684
effective length of database: 8,816,256,848
effective search space: 6030319684032
effective search space used: 6030319684032
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 82 (36.2 bits)