Query 003259
Match_columns 835
No_of_seqs 561 out of 3273
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 18:59:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003259.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003259hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 3.5E-32 1.2E-36 291.8 31.5 219 488-720 19-273 (284)
2 1dqv_A Synaptotagmin III; beta 100.0 2E-31 6.8E-36 287.6 20.0 218 488-719 20-275 (296)
3 2r83_A Synaptotagmin-1; C2A-C2 100.0 6.9E-27 2.4E-31 250.6 29.0 223 293-590 17-274 (284)
4 1dqv_A Synaptotagmin III; beta 99.9 2.9E-26 1E-30 247.1 17.5 209 293-575 18-249 (296)
5 2fk9_A Protein kinase C, ETA t 99.8 2.7E-20 9.3E-25 179.5 11.9 116 614-731 24-155 (157)
6 2dmh_A Myoferlin; beta-sandwic 99.8 2.9E-19 9.8E-24 170.1 16.5 118 616-735 4-134 (140)
7 2ep6_A MCTP2 protein; beta san 99.8 1.2E-19 4E-24 171.2 13.1 119 611-731 5-130 (133)
8 2z0u_A WW domain-containing pr 99.8 1.5E-19 5.3E-24 174.8 13.2 115 590-718 28-154 (155)
9 1rsy_A Synaptotagmin I; calciu 99.8 5.3E-19 1.8E-23 170.8 16.9 117 590-720 27-151 (152)
10 1wfj_A Putative elicitor-respo 99.8 1.1E-19 3.9E-24 172.0 11.8 121 615-736 6-132 (136)
11 2d8k_A Synaptotagmin VII; exoc 99.8 3.5E-19 1.2E-23 169.8 15.1 118 590-721 11-137 (141)
12 3f04_A Synaptotagmin-1; C2A, c 99.8 5.8E-19 2E-23 168.7 16.2 116 590-719 19-142 (143)
13 2bwq_A Regulating synaptic mem 99.8 3.8E-19 1.3E-23 166.7 14.7 113 591-718 4-129 (129)
14 1rlw_A Phospholipase A2, CALB 99.8 2.6E-19 8.9E-24 167.1 13.1 113 618-731 2-123 (126)
15 3kwu_A MUNC13-1; calcium bindi 99.8 9.6E-19 3.3E-23 168.2 17.5 114 617-732 15-146 (148)
16 3b7y_A E3 ubiquitin-protein li 99.8 7.3E-19 2.5E-23 170.0 15.8 119 615-734 16-153 (153)
17 3fbk_A RGS3, RGP3, regulator o 99.8 7.5E-19 2.6E-23 169.9 14.5 120 589-723 11-141 (153)
18 1v27_A Regulating synaptic mem 99.8 4.5E-19 1.5E-23 168.9 12.6 119 590-723 6-137 (141)
19 3fdw_A Synaptotagmin-like prot 99.8 2.7E-19 9.1E-24 172.1 11.1 117 590-720 8-135 (148)
20 2b3r_A Phosphatidylinositol-4- 99.8 1.5E-18 5.2E-23 163.8 15.8 105 617-722 18-133 (134)
21 1wfm_A Synaptotagmin XIII; C2 99.8 1.5E-18 5E-23 164.8 14.2 115 590-721 11-134 (138)
22 1gmi_A Protein kinase C, epsil 99.8 9.2E-19 3.1E-23 165.8 12.7 113 617-731 4-131 (136)
23 2dmg_A KIAA1228 protein; beta- 99.8 1.9E-18 6.4E-23 164.9 14.4 116 590-720 9-136 (142)
24 3m7f_B E3 ubiquitin-protein li 99.8 2.8E-18 9.5E-23 170.0 15.9 120 615-735 4-142 (176)
25 2chd_A Rabphilin-3A, exophilin 99.8 2.8E-18 9.4E-23 163.7 15.0 116 590-719 14-140 (142)
26 1rh8_A Piccolo protein; beta-s 99.8 6.2E-19 2.1E-23 168.2 10.4 116 590-721 5-140 (142)
27 1a25_A CALB, protein kinase C 99.8 8.4E-19 2.9E-23 168.8 10.8 119 590-725 18-145 (149)
28 2enp_A B/K protein; C2 type 1, 99.8 2.2E-18 7.6E-23 165.4 13.8 117 590-720 11-142 (147)
29 3rdl_A Protein kinase C alpha 99.8 1.4E-18 4.9E-23 164.5 11.4 117 590-723 3-128 (137)
30 1tjx_A Similar to synaptotagmi 99.8 7.3E-18 2.5E-22 164.1 16.5 118 590-721 10-149 (159)
31 3n5a_A Synaptotagmin-7; calciu 99.8 4.1E-18 1.4E-22 161.6 14.3 114 591-718 2-137 (138)
32 1ugk_A Synaptotagmin IV, KIAA1 99.8 7.8E-18 2.7E-22 159.8 15.3 117 590-720 7-134 (138)
33 2cm5_A Rabphilin-3A; protein t 99.8 1.1E-17 3.9E-22 164.0 16.5 116 590-719 22-159 (166)
34 3pyc_A E3 ubiquitin-protein li 99.8 5.2E-18 1.8E-22 159.7 13.5 116 616-731 2-131 (132)
35 2q3x_A Regulating synaptic mem 99.7 6.3E-18 2.2E-22 166.6 13.7 116 589-720 16-140 (171)
36 1w15_A Synaptotagmin IV; metal 99.7 2.2E-17 7.5E-22 159.6 14.7 101 590-704 15-125 (153)
37 2nq3_A Itchy homolog E3 ubiqui 99.7 1.1E-17 3.8E-22 164.8 11.5 116 616-731 33-159 (173)
38 2fk9_A Protein kinase C, ETA t 99.7 5.3E-17 1.8E-21 156.5 14.4 111 488-601 29-156 (157)
39 1rlw_A Phospholipase A2, CALB 99.7 7.1E-17 2.4E-21 150.5 12.4 114 488-601 3-124 (126)
40 2dmh_A Myoferlin; beta-sandwic 99.7 1.9E-16 6.6E-21 150.4 15.6 115 488-603 7-134 (140)
41 2ep6_A MCTP2 protein; beta san 99.7 1.5E-16 5.3E-21 149.8 14.8 112 488-601 13-131 (133)
42 1wfj_A Putative elicitor-respo 99.7 1.2E-16 4E-21 151.2 14.0 119 487-605 9-133 (136)
43 3kwu_A MUNC13-1; calcium bindi 99.7 3.7E-16 1.3E-20 150.0 17.6 112 488-601 17-146 (148)
44 3b7y_A E3 ubiquitin-protein li 99.7 3.3E-16 1.1E-20 151.3 15.7 116 487-602 19-153 (153)
45 1gmi_A Protein kinase C, epsil 99.7 4.1E-16 1.4E-20 147.5 13.3 112 488-602 6-133 (136)
46 3m7f_B E3 ubiquitin-protein li 99.7 1.2E-15 4.1E-20 151.0 15.3 116 488-603 8-142 (176)
47 3jzy_A Intersectin 2; C2 domai 99.6 1.3E-15 4.4E-20 176.7 13.7 117 616-732 384-507 (510)
48 3pyc_A E3 ubiquitin-protein li 99.6 4.8E-15 1.6E-19 139.3 14.9 111 489-600 6-131 (132)
49 2d8k_A Synaptotagmin VII; exoc 99.6 5.8E-15 2E-19 140.4 15.5 102 489-590 27-137 (141)
50 2b3r_A Phosphatidylinositol-4- 99.6 2.8E-15 9.5E-20 141.4 12.6 104 488-592 20-134 (134)
51 2nq3_A Itchy homolog E3 ubiqui 99.6 3.5E-15 1.2E-19 146.9 13.1 117 488-605 36-164 (173)
52 1v27_A Regulating synaptic mem 99.6 4.1E-15 1.4E-19 141.3 13.1 105 488-593 21-138 (141)
53 1rsy_A Synaptotagmin I; calciu 99.6 7.4E-15 2.5E-19 141.6 15.0 102 488-589 42-151 (152)
54 3fbk_A RGS3, RGP3, regulator o 99.6 5.8E-15 2E-19 142.5 14.2 104 488-592 27-141 (153)
55 2cjt_A UNC-13 homolog A, MUNC1 99.6 4.3E-15 1.5E-19 139.3 12.7 95 617-717 3-102 (131)
56 3f04_A Synaptotagmin-1; C2A, c 99.6 5.9E-15 2E-19 140.7 13.6 101 488-588 34-142 (143)
57 2bwq_A Regulating synaptic mem 99.6 8.5E-15 2.9E-19 136.9 13.8 99 488-587 18-129 (129)
58 3rdl_A Protein kinase C alpha 99.6 4.9E-15 1.7E-19 140.1 11.0 105 488-593 16-129 (137)
59 3fdw_A Synaptotagmin-like prot 99.6 7.3E-15 2.5E-19 141.0 12.2 103 488-590 23-136 (148)
60 1a25_A CALB, protein kinase C 99.6 3.6E-15 1.2E-19 143.3 10.0 105 489-594 32-145 (149)
61 2z0u_A WW domain-containing pr 99.6 7.7E-15 2.6E-19 141.7 11.9 100 488-587 43-154 (155)
62 3l9b_A Otoferlin; C2-domain, b 99.6 9.7E-15 3.3E-19 135.0 11.9 110 618-732 20-139 (144)
63 2chd_A Rabphilin-3A, exophilin 99.6 2E-14 6.8E-19 136.9 14.3 101 488-588 29-140 (142)
64 3nsj_A Perforin-1; pore formin 99.5 2.7E-14 9.2E-19 163.8 15.3 109 616-732 391-503 (540)
65 1rh8_A Piccolo protein; beta-s 99.5 7.6E-15 2.6E-19 139.7 9.0 102 489-590 19-140 (142)
66 1wfm_A Synaptotagmin XIII; C2 99.5 4.9E-14 1.7E-18 133.5 14.2 100 488-590 26-134 (138)
67 3n5a_A Synaptotagmin-7; calciu 99.5 7.4E-14 2.5E-18 132.0 15.1 88 488-575 16-113 (138)
68 2cjs_A UNC-13 homolog A, MUNC1 99.5 3.5E-14 1.2E-18 138.7 12.8 85 617-707 12-99 (167)
69 1ugk_A Synaptotagmin IV, KIAA1 99.5 1.2E-13 4.1E-18 130.8 16.2 102 488-589 22-134 (138)
70 2q3x_A Regulating synaptic mem 99.5 2.3E-14 7.9E-19 141.0 11.2 102 489-590 31-141 (171)
71 2dmg_A KIAA1228 protein; beta- 99.5 5.1E-14 1.7E-18 134.0 13.1 102 488-590 24-137 (142)
72 2enp_A B/K protein; C2 type 1, 99.5 3.8E-14 1.3E-18 135.8 12.2 102 488-589 26-142 (147)
73 1tjx_A Similar to synaptotagmi 99.5 9.6E-14 3.3E-18 134.8 14.2 104 488-591 25-150 (159)
74 2cm5_A Rabphilin-3A; protein t 99.5 3.3E-13 1.1E-17 132.0 15.9 100 488-589 37-146 (166)
75 1w15_A Synaptotagmin IV; metal 99.5 4.3E-13 1.5E-17 129.3 15.2 99 488-588 30-138 (153)
76 1cjy_A CPLA2, protein (cytosol 99.5 9.9E-14 3.4E-18 163.7 11.2 104 616-720 15-127 (749)
77 2cjt_A UNC-13 homolog A, MUNC1 99.4 2.6E-13 8.8E-18 127.2 9.5 88 293-408 3-91 (131)
78 1djx_A PLC-D1, phosphoinositid 99.4 8.3E-13 2.8E-17 154.9 15.4 113 616-731 494-622 (624)
79 3jzy_A Intersectin 2; C2 domai 99.4 8E-13 2.7E-17 153.1 14.5 115 487-601 386-507 (510)
80 3l9b_A Otoferlin; C2-domain, b 99.4 2.1E-12 7.3E-17 119.4 12.9 111 489-604 22-142 (144)
81 3nsj_A Perforin-1; pore formin 99.4 3.8E-12 1.3E-16 146.0 15.8 106 488-601 394-503 (540)
82 2cjs_A UNC-13 homolog A, MUNC1 99.3 3.7E-12 1.3E-16 124.3 12.1 85 488-578 14-101 (167)
83 3bxj_A RAS GTPase-activating p 99.3 1.9E-13 6.5E-18 156.3 0.1 97 617-718 9-115 (483)
84 3pfq_A PKC-B, PKC-beta, protei 99.2 1.5E-11 5.1E-16 147.0 10.9 112 591-719 160-280 (674)
85 1cjy_A CPLA2, protein (cytosol 99.2 3.4E-11 1.2E-15 142.2 10.3 103 487-589 17-127 (749)
86 1djx_A PLC-D1, phosphoinositid 99.2 1.9E-10 6.5E-15 134.9 14.9 112 487-601 496-623 (624)
87 3bxj_A RAS GTPase-activating p 99.1 4.5E-12 1.5E-16 144.9 -0.8 98 486-588 9-116 (483)
88 3ohm_B 1-phosphatidylinositol- 99.0 1.4E-09 4.6E-14 130.6 13.8 105 616-731 722-843 (885)
89 3qr0_A Phospholipase C-beta (P 99.0 2.1E-09 7.2E-14 128.3 13.0 105 616-731 647-769 (816)
90 2zkm_X 1-phosphatidylinositol- 99.0 1.9E-09 6.4E-14 129.5 12.4 106 615-731 674-797 (799)
91 1yrk_A NPKC-delta, protein kin 98.9 1.9E-08 6.6E-13 90.1 13.5 110 617-732 4-124 (126)
92 3pfq_A PKC-B, PKC-beta, protei 98.9 3.2E-09 1.1E-13 126.8 10.2 105 488-593 172-285 (674)
93 2enj_A NPKC-theta, protein kin 98.8 2.7E-08 9.1E-13 90.4 12.8 110 616-731 7-128 (138)
94 1yrk_A NPKC-delta, protein kin 98.7 3.7E-07 1.3E-11 81.9 15.2 107 489-601 7-124 (126)
95 3ohm_B 1-phosphatidylinositol- 98.6 1.1E-07 3.7E-12 114.3 12.5 105 488-602 725-845 (885)
96 3qr0_A Phospholipase C-beta (P 98.6 1.7E-07 6E-12 111.9 13.8 104 488-601 650-770 (816)
97 2zkm_X 1-phosphatidylinositol- 98.6 1.4E-07 4.6E-12 113.4 12.9 93 487-589 677-781 (799)
98 2enj_A NPKC-theta, protein kin 98.5 5.8E-07 2E-11 81.7 11.5 107 489-601 11-129 (138)
99 2yrb_A Protein fantom; beta sa 91.5 1.4 4.7E-05 41.3 10.8 121 614-736 13-153 (156)
100 2wxf_A Phosphatidylinositol-4, 84.2 2.9 9.8E-05 50.8 10.0 85 618-705 216-324 (940)
101 2yrb_A Protein fantom; beta sa 79.8 22 0.00074 33.2 12.0 113 488-601 18-149 (156)
102 3l4c_A Dedicator of cytokinesi 79.8 21 0.00072 35.2 12.6 53 520-572 77-138 (220)
103 3l4c_A Dedicator of cytokinesi 79.1 19 0.00065 35.5 12.0 55 349-403 78-138 (220)
104 3hhm_A Phosphatidylinositol-4, 74.8 8.1 0.00028 47.3 9.7 86 618-705 354-455 (1091)
105 2wxf_A Phosphatidylinositol-4, 69.0 18 0.00063 43.8 11.0 83 489-574 218-324 (940)
106 1e7u_A Phosphatidylinositol 3- 66.2 15 0.00052 44.6 9.5 86 619-705 218-330 (961)
107 2y3a_A Phosphatidylinositol-4, 59.2 4.8 0.00016 49.5 3.4 67 618-687 352-430 (1092)
108 3hhm_A Phosphatidylinositol-4, 56.1 36 0.0012 41.7 10.2 87 488-575 355-456 (1091)
109 2y3a_A Phosphatidylinositol-4, 48.1 15 0.00053 45.1 5.3 68 294-386 352-430 (1092)
110 1e7u_A Phosphatidylinositol 3- 45.0 81 0.0028 38.3 10.8 85 489-574 219-330 (961)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=100.00 E-value=3.5e-32 Score=291.84 Aligned_cols=219 Identities=26% Similarity=0.452 Sum_probs=193.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEeccC-
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF- 559 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg---~~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~~- 559 (835)
+.|.|+|++|++|+.++..|.+||||+++++ ++.++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 19 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~~~ 98 (284)
T 2r83_A 19 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDRFS 98 (284)
T ss_dssp TEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCSSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCCCC
Confidence 3899999999999999989999999999994 458899999 999999999999987542 57899999999987
Q ss_pred CCceEEEEEEeccccccCCeeeeEEecccC------CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCc
Q 003259 560 GDENMGSARVNLEGLVEGSVRDIWVPLEKV------NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVA 633 (835)
Q Consensus 560 ~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~------~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~ 633 (835)
++++||++.++|.++..+.....|++|... ..|+|.+++.|. +..+.|+|.|++|++|+.
T Consensus 99 ~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~--------------p~~~~l~v~v~~a~~L~~ 164 (284)
T 2r83_A 99 KHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYV--------------PTAGKLTVVILEAKNLKK 164 (284)
T ss_dssp CCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCC
T ss_pred CCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEec--------------CcCCceEEEEEEeECCCC
Confidence 799999999999999888888899999753 359999999998 567899999999999999
Q ss_pred CCcCCCCCCEEEEEEC--C---eEeeeeeecCCCCCeeeeEEEeecC-----CCcEEEEEEECCCCCCCCeEEEEEEEcc
Q 003259 634 ADLRGTSDPYVKVQYG--D---LKKRTKVIFKTLNPQWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQ 703 (835)
Q Consensus 634 ~d~~g~~DPyv~v~~~--~---~~~kT~v~~~t~nP~wne~f~f~v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~ 703 (835)
.|..|.+||||++++. + .+++|+++++|+||+|||+|.|.+. ...|.|+|||+|.++++++||++.++++
T Consensus 165 ~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~ 244 (284)
T 2r83_A 165 MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYN 244 (284)
T ss_dssp CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETT
T ss_pred cCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCC
Confidence 9999999999999984 2 4679999999999999999999985 2369999999999999999999999997
Q ss_pred cc------------CCCCceeeEEecCCC
Q 003259 704 RL------------PPNQMADKWIPLQGV 720 (835)
Q Consensus 704 ~l------------~~~~~~~~w~~L~~~ 720 (835)
.+ .++....+||+|.+.
T Consensus 245 ~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 245 STGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp CCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred CCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 52 345567899999763
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.97 E-value=2e-31 Score=287.59 Aligned_cols=218 Identities=28% Similarity=0.437 Sum_probs=188.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEeccC-
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY---GKIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF- 559 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l---g~~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~~- 559 (835)
+.|.|+|++|++|+.++..|.+||||++++ +++.++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 20 ~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~ 99 (296)
T 1dqv_A 20 DQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFS 99 (296)
T ss_dssp CEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCSSS
T ss_pred CEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCCCC
Confidence 389999999999999998999999999999 5688999999 999999999999997543 45899999999988
Q ss_pred CCceEEEEEEe-cccccc-CCeeeeEEecccC-----CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCC
Q 003259 560 GDENMGSARVN-LEGLVE-GSVRDIWVPLEKV-----NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLV 632 (835)
Q Consensus 560 ~d~~IG~~~i~-L~~l~~-~~~~~~w~~L~~~-----~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~ 632 (835)
++++||++.++ +.++.. ......|++|... ..|+|.+++.|. +..|.|+|.|++|++|+
T Consensus 100 ~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~--------------~~~~~l~v~v~~a~~L~ 165 (296)
T 1dqv_A 100 RHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYL--------------PTAGLLTVTIIKASNLK 165 (296)
T ss_dssp CCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEE--------------TTTTEEEEEEEEEESCC
T ss_pred CCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEec--------------cccceeEEEEEEeecCC
Confidence 89999999995 555544 2345679999653 359999999998 56799999999999999
Q ss_pred cCCcCCCCCCEEEEEEC--C---eEeeeeeecCCCCCeeeeEEEeecC-----CCcEEEEEEECCCCCCCCeEEEEEEEc
Q 003259 633 AADLRGTSDPYVKVQYG--D---LKKRTKVIFKTLNPQWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEY 702 (835)
Q Consensus 633 ~~d~~g~~DPyv~v~~~--~---~~~kT~v~~~t~nP~wne~f~f~v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l 702 (835)
.+|..|.+||||++++. + .+++|+++++|+||+|||+|.|.+. ...|.|+|||++.+++|++||++.|++
T Consensus 166 ~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l 245 (296)
T 1dqv_A 166 AMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGP 245 (296)
T ss_dssp CCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSS
T ss_pred ccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECC
Confidence 99999999999999995 2 5789999999999999999999986 347999999999999999999999998
Q ss_pred cccC-------------CCCceeeEEecCC
Q 003259 703 QRLP-------------PNQMADKWIPLQG 719 (835)
Q Consensus 703 ~~l~-------------~~~~~~~w~~L~~ 719 (835)
+.+. .+.+..+|++|.+
T Consensus 246 ~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~ 275 (296)
T 1dqv_A 246 EAADPHGREHWAEMLANPRKPVEHWHQLVE 275 (296)
T ss_dssp CTTCHHHHHHHHTSSSSSSSCSCSCCCCBB
T ss_pred ccCCchhHHHHHHHHhCCCCceeEeeeccC
Confidence 8653 3456778888865
No 3
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.95 E-value=6.9e-27 Score=250.59 Aligned_cols=223 Identities=19% Similarity=0.261 Sum_probs=178.0
Q ss_pred cccEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCcCeEEEEEec----ceeeeeccCCCCCCcccceeE
Q 003259 293 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELE----ELTRRTDARPGSDPRWDSMFN 368 (835)
Q Consensus 293 ~~GvL~V~V~~A~~L~~~~~~g~~~~~~~~~~~dpy~~~~~~~~~~dpyv~v~~g----~~~~t~~i~~~~nP~W~etf~ 368 (835)
..|.|.|+|++|++|+..+..|.+ ||||+|+++ ...+|++++++.||+|||+|.
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~~----------------------dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~ 74 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGTS----------------------DPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFT 74 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSSC----------------------CEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCC----------------------CeEEEEEEEcCCCceEeCCcccCCCCCeeCceEE
Confidence 459999999999999988866644 999999995 356788889999999999999
Q ss_pred EEEEcC---CceEEEEEEEeCCCCCCcceeEEEEEecccccCCCcceeeeCCCCccccccccccCceeeeEeecCCC---
Q 003259 369 MVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFEGV--- 442 (835)
Q Consensus 369 ~~v~~~---~~~L~~~v~d~~~~~~kdd~LG~~~i~L~~L~~~~~~~w~v~~~~~~~~~~~~~~g~~~~~~~~~~~~--- 442 (835)
|.+... .+.|.|+|||.|. ..+|++||++.++|.++..... .+.|+++...
T Consensus 75 f~v~~~~~~~~~l~~~V~d~d~-~~~~~~lG~~~i~l~~l~~~~~----------------------~~~w~~L~~~~~~ 131 (284)
T 2r83_A 75 FKVPYSELAGKTLVMAVYDFDR-FSKHDIIGEFKVPMNTVDFGHV----------------------TEEWRDLQSAEKE 131 (284)
T ss_dssp ECCCGGGCTTCEEEEEEEECCS-SSCCCEEEEEEEEGGGCCCSSC----------------------EEEEEECBCCSSC
T ss_pred EEechHHhCcCEEEEEEEECCC-CCCCceeEEEEEcchhcccCCc----------------------ceeEEEeeccccc
Confidence 998653 4799999999997 5688999999999999875432 1233333221
Q ss_pred ---CcceEEEEEEEeecccCCCCcccCccccCCCccccCCCCccCCCCcEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-
Q 003259 443 ---NSGELTVRLVLKEWQFSDGSHSLNNFHSGSQQSLSGSSNFISRTGRKINVTVVEGKDLMPKDKSGKCDPYVKLQYG- 518 (835)
Q Consensus 443 ---~~G~l~~~l~l~~~~~~d~~~~~~~~~~~~~~~~~~~p~~~~~~g~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg- 518 (835)
..|++.+.+.+.+ ..+.|.|+|++|++|+.++..|.+||||++++.
T Consensus 132 ~~~~~G~i~l~l~~~p------------------------------~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~ 181 (284)
T 2r83_A 132 EQEKLGDICFSLRYVP------------------------------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQ 181 (284)
T ss_dssp CCCCCCEEEEEEEEET------------------------------TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEE
T ss_pred cccccccEEEEEEecC------------------------------cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEe
Confidence 3477766554321 123899999999999999989999999999992
Q ss_pred -C---eEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEeccC-CCceEEEEEEeccccc------------cC
Q 003259 519 -K---IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF-GDENMGSARVNLEGLV------------EG 577 (835)
Q Consensus 519 -~---~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~~-~d~~IG~~~i~L~~l~------------~~ 577 (835)
+ .+++|+++ ++.||.|||+|.|.+... ...|.|+|||++.. ++++||++.+++..+. .+
T Consensus 182 ~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~ 261 (284)
T 2r83_A 182 NGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPR 261 (284)
T ss_dssp TTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCHHHHHHHHHHHHSTT
T ss_pred CCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCCcHHHHHHHHHHCCC
Confidence 2 47899999 999999999999997654 45799999999988 8999999999998632 12
Q ss_pred CeeeeEEecccCC
Q 003259 578 SVRDIWVPLEKVN 590 (835)
Q Consensus 578 ~~~~~w~~L~~~~ 590 (835)
.....|++|.+..
T Consensus 262 ~~~~~W~~L~~~~ 274 (284)
T 2r83_A 262 RPIAQWHTLQVEE 274 (284)
T ss_dssp SCEEEEEECBCHH
T ss_pred CchheeeecCCcc
Confidence 3557899998643
No 4
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.94 E-value=2.9e-26 Score=247.15 Aligned_cols=209 Identities=19% Similarity=0.274 Sum_probs=165.5
Q ss_pred cccEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCcCeEEEEEe---c-ceeeeeccCCCCCCcccceeE
Q 003259 293 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL---E-ELTRRTDARPGSDPRWDSMFN 368 (835)
Q Consensus 293 ~~GvL~V~V~~A~~L~~~~~~g~~~~~~~~~~~dpy~~~~~~~~~~dpyv~v~~---g-~~~~t~~i~~~~nP~W~etf~ 368 (835)
..|.|.|+|++|++|+..|..|.+ ||||++++ + ...+|++++++.||+|||+|.
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~~g~~----------------------dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~ 75 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDSNGFS----------------------DPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQ 75 (296)
T ss_dssp SSCEEEEEEEEEECCCCCSTTSCC----------------------CEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEE
T ss_pred CCCEEEEEEEEeECCCCcCCCCCc----------------------CeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEE
Confidence 469999999999999988876654 99999999 3 456788889999999999999
Q ss_pred EEEEcC---CceEEEEEEEeCCCCCCcceeEEEEEe-cccccCCCcceeeeCCCCccccccccccCceeeeEeecC----
Q 003259 369 MVLHEE---TGTVRFNLYECIPGHVKYDYLTSCEVK-MKYVADDSTTFWAIGPDSGIIAKHAEFCGDEVEMTVPFE---- 440 (835)
Q Consensus 369 ~~v~~~---~~~L~~~v~d~~~~~~kdd~LG~~~i~-L~~L~~~~~~~w~v~~~~~~~~~~~~~~g~~~~~~~~~~---- 440 (835)
|.+... ...|+|+|||+|. ..++++||++.++ +.++..... ....|.++.
T Consensus 76 f~v~~~~l~~~~L~~~V~d~d~-~~~~~~iG~~~i~~l~~~~~~~~---------------------~~~~w~~L~~~~~ 133 (296)
T 1dqv_A 76 FSVPLAELAQRKLHFSVYDFDR-FSRHDLIGQVVLDNLLELAEQPP---------------------DRPLWRDILEGGS 133 (296)
T ss_dssp EECCGGGGSSCCCEEEEEECCS-SSCCCEEEEEECCCTTGGGSSCS---------------------SCCCCEECBCCSS
T ss_pred EEecHHHhcCCEEEEEEEEcCC-CCCCceEEEEEeccccccccCCc---------------------cceeeeccccccc
Confidence 998643 3599999999997 6789999999996 444433210 011122221
Q ss_pred -CCCcceEEEEEEEeecccCCCCcccCccccCCCccccCCCCccCCCCcEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-
Q 003259 441 -GVNSGELTVRLVLKEWQFSDGSHSLNNFHSGSQQSLSGSSNFISRTGRKINVTVVEGKDLMPKDKSGKCDPYVKLQYG- 518 (835)
Q Consensus 441 -~~~~G~l~~~l~l~~~~~~d~~~~~~~~~~~~~~~~~~~p~~~~~~g~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg- 518 (835)
....|++.+.+.+.+ ..+.|.|+|++|++|+.++..|.+||||++++.
T Consensus 134 ~~~~~G~i~vsl~y~~------------------------------~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~ 183 (296)
T 1dqv_A 134 EKADLGELNFSLCYLP------------------------------TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLIS 183 (296)
T ss_dssp CCSCCCEEEEEEEEET------------------------------TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCT
T ss_pred cccccceEEEEEEecc------------------------------ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEe
Confidence 113578777654432 124899999999999999989999999999994
Q ss_pred -C---eEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEeccC-CCceEEEEEEeccccc
Q 003259 519 -K---IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF-GDENMGSARVNLEGLV 575 (835)
Q Consensus 519 -~---~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~~-~d~~IG~~~i~L~~l~ 575 (835)
+ .+++|+++ ++.||.|||+|.|.+... ...|.|+|||++.. ++++||++.+++.++.
T Consensus 184 ~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 184 EGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp TCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTC
T ss_pred CCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCC
Confidence 2 57899999 999999999999987654 35799999999988 8999999999998764
No 5
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.82 E-value=2.7e-20 Score=179.50 Aligned_cols=116 Identities=24% Similarity=0.383 Sum_probs=103.7
Q ss_pred CCCcceEEEEEEEEeecCCcCCc----------CCCCCCEEEEEECCeE-eeeeeecCCCCCeeeeEEEeecC-CCcEEE
Q 003259 614 IGSGNGWIELVIVEARDLVAADL----------RGTSDPYVKVQYGDLK-KRTKVIFKTLNPQWHQTLEFPDD-GSPLTL 681 (835)
Q Consensus 614 ~~~~~g~L~v~v~~a~~L~~~d~----------~g~~DPyv~v~~~~~~-~kT~v~~~t~nP~wne~f~f~v~-~~~L~i 681 (835)
.....|.|+|+|++|++|+++|. .|.+||||++.+++.+ .||+++++|+||+|||+|.|.+. ...|.|
T Consensus 24 ~~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~~~L~~ 103 (157)
T 2fk9_A 24 TMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDGGHLEL 103 (157)
T ss_dssp CCCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEECEEEE
T ss_pred hccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCCCEEEE
Confidence 34678999999999999998873 3679999999998865 69999999999999999999986 578999
Q ss_pred EEEECCCCCCCCeEEEEEEEccccCCC----CceeeEEecCCCCCcEEEEEEEE
Q 003259 682 HVRDHNALLASSSIGDCVVEYQRLPPN----QMADKWIPLQGVRKGEIHVLITR 731 (835)
Q Consensus 682 ~V~d~d~~~~d~~iG~~~i~l~~l~~~----~~~~~w~~L~~~~~G~i~l~l~~ 731 (835)
+|||+|.+++|++||++.|++.++..+ ...+.|++|++ .|+|+++++|
T Consensus 104 ~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--~G~i~l~l~~ 155 (157)
T 2fk9_A 104 AVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--EGKVFVVITL 155 (157)
T ss_dssp EEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--SCEEEEEEEE
T ss_pred EEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--CcEEEEEEEE
Confidence 999999999999999999999988643 67899999975 8999999987
No 6
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=2.9e-19 Score=170.12 Aligned_cols=118 Identities=27% Similarity=0.423 Sum_probs=106.7
Q ss_pred CcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCeEeeeeeecCCCCCeeeeEEEeecC------CCcEEEEEEECCCC
Q 003259 616 SGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIFKTLNPQWHQTLEFPDD------GSPLTLHVRDHNAL 689 (835)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~------~~~L~i~V~d~d~~ 689 (835)
...|.|+|+|++|++|+..+. |.+||||++++++++++|+++++++||+|||+|.|.+. ...|.|+|||+|.+
T Consensus 4 ~~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~ 82 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETI 82 (140)
T ss_dssp CBCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCS
T ss_pred CCCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCC
Confidence 467899999999999999998 99999999999999999999999999999999999974 47899999999999
Q ss_pred CCCCeEEEEEEEccccCCCCceeeEEe---cCCC----CCcEEEEEEEEEecC
Q 003259 690 LASSSIGDCVVEYQRLPPNQMADKWIP---LQGV----RKGEIHVLITRKVPE 735 (835)
Q Consensus 690 ~~d~~iG~~~i~l~~l~~~~~~~~w~~---L~~~----~~G~i~l~l~~~~p~ 735 (835)
++|++||++.+++.++..+...+.|++ |.+. .+|+|+++++| .|.
T Consensus 83 ~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~-~p~ 134 (140)
T 2dmh_A 83 GQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGY-DPP 134 (140)
T ss_dssp SSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEE-CCC
T ss_pred CCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEE-ECC
Confidence 999999999999999988888899988 6432 34999999999 553
No 7
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.81 E-value=1.2e-19 Score=171.24 Aligned_cols=119 Identities=24% Similarity=0.433 Sum_probs=108.0
Q ss_pred CCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCeEeeeeeecCCCCCeeeeEEEeecC--CCcEEEEEEECCC
Q 003259 611 GQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIFKTLNPQWHQTLEFPDD--GSPLTLHVRDHNA 688 (835)
Q Consensus 611 ~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~--~~~L~i~V~d~d~ 688 (835)
...+..+.|.|+|+|++|++|+..+..|.+||||++.+++++++|+++++|+||+|||+|.|++. ...|.|+|||+|.
T Consensus 5 s~~~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~ 84 (133)
T 2ep6_A 5 SSGDVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDG 84 (133)
T ss_dssp CCCSCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEET
T ss_pred cccccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCC
Confidence 34567889999999999999999999999999999999999999999999999999999999986 5789999999999
Q ss_pred CCCCCeEEEEEEEccccCCCCceeeEEecCC-----CCCcEEEEEEEE
Q 003259 689 LLASSSIGDCVVEYQRLPPNQMADKWIPLQG-----VRKGEIHVLITR 731 (835)
Q Consensus 689 ~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~-----~~~G~i~l~l~~ 731 (835)
+++|++||++.+++.++..+. .+|++|.. ...|+|+++++|
T Consensus 85 ~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 85 DKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDL 130 (133)
T ss_dssp TEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEE
T ss_pred CCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEE
Confidence 999999999999999997653 58999963 357999999998
No 8
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=174.82 Aligned_cols=115 Identities=10% Similarity=0.151 Sum_probs=105.1
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECC------eEeeeeeecCCCC
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD------LKKRTKVIFKTLN 663 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~v~~~t~n 663 (835)
..|+|.+++.|. +..+.|+|+|++|++|+++|..|.+||||++++.+ .++||+++++|+|
T Consensus 28 ~~G~l~~sl~y~--------------~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tln 93 (155)
T 2z0u_A 28 GATRIQIALKYD--------------EKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDT 93 (155)
T ss_dssp CCEEEEEEEEEE--------------TTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSS
T ss_pred CcEEEEEEEEEc--------------CCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCC
Confidence 469999999998 67799999999999999999999999999999954 2789999999999
Q ss_pred CeeeeEEEeecC-----CCcEEEEEEECCCCCCCCeEEEEEEEccccC-CCCceeeEEecC
Q 003259 664 PQWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLP-PNQMADKWIPLQ 718 (835)
Q Consensus 664 P~wne~f~f~v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~-~~~~~~~w~~L~ 718 (835)
|+|||+|.|.+. ...|.|+|||+|.++++++||++.++|.++. .+....+||+|.
T Consensus 94 P~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 94 LVFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEEEEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CccccEEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 999999999986 4689999999999999999999999999995 366789999985
No 9
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=5.3e-19 Score=170.81 Aligned_cols=117 Identities=32% Similarity=0.464 Sum_probs=107.8
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEE---CCeEeeeeeecCCCCCee
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY---GDLKKRTKVIFKTLNPQW 666 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~---~~~~~kT~v~~~t~nP~w 666 (835)
..|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++ +..+++|+++++|+||+|
T Consensus 27 ~~G~l~~~l~y~--------------~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~w 92 (152)
T 1rsy_A 27 KLGKLQYSLDYD--------------FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVF 92 (152)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEE
T ss_pred CceEEEEEEEEe--------------CCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcC
Confidence 469999999998 677999999999999999999999999999999 346889999999999999
Q ss_pred eeEEEeecC-----CCcEEEEEEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCC
Q 003259 667 HQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGV 720 (835)
Q Consensus 667 ne~f~f~v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 720 (835)
||+|.|.+. ...|.|+|||++.+++|++||++.+++.++..+...++|++|.+.
T Consensus 93 ne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 93 NEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp EEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred cccEEEeecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 999999975 578999999999999999999999999999888889999999753
No 10
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.80 E-value=1.1e-19 Score=172.01 Aligned_cols=121 Identities=21% Similarity=0.365 Sum_probs=108.7
Q ss_pred CCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCeEeeeeeec-CCCCCeeeeEEEeecC--CCcEEEEEEECCCCCC
Q 003259 615 GSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIF-KTLNPQWHQTLEFPDD--GSPLTLHVRDHNALLA 691 (835)
Q Consensus 615 ~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~-~t~nP~wne~f~f~v~--~~~L~i~V~d~d~~~~ 691 (835)
..+.|.|+|+|++|++|+..+..|.+||||++++++++++|++++ +++||+|||+|.|.+. ...|.|+|||++.+++
T Consensus 6 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~ 85 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTE 85 (136)
T ss_dssp CCCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTT
T ss_pred CCCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCC
Confidence 467899999999999999999999999999999999999999998 8999999999999985 5789999999999999
Q ss_pred CCeEEEEEEEcccc-CCCCceeeEEecC--CCCCcEEEEEEEEEecCC
Q 003259 692 SSSIGDCVVEYQRL-PPNQMADKWIPLQ--GVRKGEIHVLITRKVPEL 736 (835)
Q Consensus 692 d~~iG~~~i~l~~l-~~~~~~~~w~~L~--~~~~G~i~l~l~~~~p~~ 736 (835)
|++||++.+++.++ ..+.....||+|. +...|+|+++++| .|..
T Consensus 86 d~~lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~-~p~~ 132 (136)
T 1wfj_A 86 DDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSF-KPSG 132 (136)
T ss_dssp TCCSEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEE-EECC
T ss_pred CceEEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEE-EeCC
Confidence 99999999999998 4455578999995 4456999999999 6654
No 11
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=3.5e-19 Score=169.83 Aligned_cols=118 Identities=30% Similarity=0.461 Sum_probs=107.2
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEEC---CeEeeeeeecCCCCCee
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYG---DLKKRTKVIFKTLNPQW 666 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~---~~~~kT~v~~~t~nP~w 666 (835)
..|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++. ..+++|+++++|+||+|
T Consensus 11 ~~G~l~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~w 76 (141)
T 2d8k_A 11 NLGRIQFSVGYN--------------FQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHW 76 (141)
T ss_dssp CCCEEEEEEEEC--------------SSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCC
T ss_pred eeeEEEEEEEEe--------------CCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCcc
Confidence 369999999998 5679999999999999999999999999999994 36889999999999999
Q ss_pred eeEEEeec-C-----CCcEEEEEEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCCC
Q 003259 667 HQTLEFPD-D-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR 721 (835)
Q Consensus 667 ne~f~f~v-~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~ 721 (835)
||+|.|.+ . ...|.|+|||++.+++|++||++.+++.++..+.....|++|.+..
T Consensus 77 ne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 77 NETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp CEEEEECSCCHHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred ccEEEECccCHHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 99999985 2 5789999999999999999999999999998888899999997543
No 12
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.80 E-value=5.8e-19 Score=168.67 Aligned_cols=116 Identities=32% Similarity=0.468 Sum_probs=107.6
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEE---CCeEeeeeeecCCCCCee
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY---GDLKKRTKVIFKTLNPQW 666 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~---~~~~~kT~v~~~t~nP~w 666 (835)
..|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++ +..+++|+++++|+||+|
T Consensus 19 ~~G~l~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~w 84 (143)
T 3f04_A 19 KLGKLQYSLDYD--------------FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVF 84 (143)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEE
T ss_pred CeEEEEEEEEEe--------------CCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcC
Confidence 469999999998 677999999999999999999999999999999 446899999999999999
Q ss_pred eeEEEeecC-----CCcEEEEEEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCC
Q 003259 667 HQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQG 719 (835)
Q Consensus 667 ne~f~f~v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~ 719 (835)
||+|.|.+. ...|.|+|||++.+++|++||++.++|.++..+.....|++|+.
T Consensus 85 ne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 85 NEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp EEEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred cCeEEEeecHhhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 999999975 47899999999999999999999999999998888999999975
No 13
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.80 E-value=3.8e-19 Score=166.69 Aligned_cols=113 Identities=26% Similarity=0.466 Sum_probs=98.5
Q ss_pred CceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEE-----CCeEeeeeeecCCCCCe
Q 003259 591 TGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY-----GDLKKRTKVIFKTLNPQ 665 (835)
Q Consensus 591 ~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~v~~~t~nP~ 665 (835)
.|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++ +..+++|+++++|+||+
T Consensus 4 ~G~l~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~ 69 (129)
T 2bwq_A 4 SGQLSIKLWFD--------------KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPK 69 (129)
T ss_dssp CCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCE
T ss_pred eEEEEEEEEEc--------------cCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCc
Confidence 59999999998 667999999999999999999999999999999 34689999999999999
Q ss_pred eeeEEEeec-C-----CCcEEEEEEECCCCCC--CCeEEEEEEEccccCCCCceeeEEecC
Q 003259 666 WHQTLEFPD-D-----GSPLTLHVRDHNALLA--SSSIGDCVVEYQRLPPNQMADKWIPLQ 718 (835)
Q Consensus 666 wne~f~f~v-~-----~~~L~i~V~d~d~~~~--d~~iG~~~i~l~~l~~~~~~~~w~~L~ 718 (835)
|||+|.|.+ . ...|.|+|||++.+++ +++||++.+++.++.... .++||+|+
T Consensus 70 wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 70 WNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EEEEEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred cccEEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 999999995 2 4789999999999987 999999999999987654 88999985
No 14
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.80 E-value=2.6e-19 Score=167.12 Aligned_cols=113 Identities=20% Similarity=0.362 Sum_probs=102.0
Q ss_pred ceEEEEEEEEeecCCcC---CcCCCCCCEEEEEECC---eEeeeeeecCCCCCeeeeEEEeecC---CCcEEEEEEECCC
Q 003259 618 NGWIELVIVEARDLVAA---DLRGTSDPYVKVQYGD---LKKRTKVIFKTLNPQWHQTLEFPDD---GSPLTLHVRDHNA 688 (835)
Q Consensus 618 ~g~L~v~v~~a~~L~~~---d~~g~~DPyv~v~~~~---~~~kT~v~~~t~nP~wne~f~f~v~---~~~L~i~V~d~d~ 688 (835)
.|.|+|+|++|++|+.+ +..|.+||||++++++ .+++|+++++|+||+|||+|.|.+. ...|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 58999999999999984 6779999999999975 7889999999999999999999984 5789999999998
Q ss_pred CCCCCeEEEEEEEccccCCCCceeeEEecCCCCCcEEEEEEEE
Q 003259 689 LLASSSIGDCVVEYQRLPPNQMADKWIPLQGVRKGEIHVLITR 731 (835)
Q Consensus 689 ~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i~l~l~~ 731 (835)
++ |++||++.++|.++..+.....|++|.+..+|+|+++++.
T Consensus 82 ~~-~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~ 123 (126)
T 1rlw_A 82 VM-DETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEV 123 (126)
T ss_dssp SC-CEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEEC
T ss_pred CC-CceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEe
Confidence 75 8999999999999998888999999998777888887764
No 15
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.80 E-value=9.6e-19 Score=168.17 Aligned_cols=114 Identities=32% Similarity=0.533 Sum_probs=103.6
Q ss_pred cceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCeEeeeeeecCCCCCeeeeEEEeecC--CCcEEEEEEECCCC-----
Q 003259 617 GNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIFKTLNPQWHQTLEFPDD--GSPLTLHVRDHNAL----- 689 (835)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~--~~~L~i~V~d~d~~----- 689 (835)
..|.|+|+|++|++|+..|..|.+||||++++++.+++|+++++|+||+|||+|.|.+. ...|.|+|||+|..
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~~~ 94 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKSRV 94 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHHHH
T ss_pred cccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccccc
Confidence 46999999999999999999999999999999999999999999999999999999974 57899999999986
Q ss_pred ------CCCCeEEEEEEEccccCCCCceeeEEecCC-----CCCcEEEEEEEEE
Q 003259 690 ------LASSSIGDCVVEYQRLPPNQMADKWIPLQG-----VRKGEIHVLITRK 732 (835)
Q Consensus 690 ------~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~-----~~~G~i~l~l~~~ 732 (835)
++|++||++.+++.++. ...++|++|.. ...|+|+++++|.
T Consensus 95 ~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 95 KQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 88999999999999983 45789999973 3469999999983
No 16
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.79 E-value=7.3e-19 Score=169.99 Aligned_cols=119 Identities=29% Similarity=0.410 Sum_probs=98.5
Q ss_pred CCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECC------eEeeeeeecCCCCCeeeeEEEeecC--CCcEEEEEEEC
Q 003259 615 GSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD------LKKRTKVIFKTLNPQWHQTLEFPDD--GSPLTLHVRDH 686 (835)
Q Consensus 615 ~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~v~~~t~nP~wne~f~f~v~--~~~L~i~V~d~ 686 (835)
....+.|+|+|++|++|+..+..|.+||||++++++ .+++|+++++|+||+|||+|.|.+. ...|.|+|||+
T Consensus 16 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~ 95 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDE 95 (153)
T ss_dssp CTTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEEC
Confidence 467899999999999999999999999999999963 5789999999999999999999985 56799999999
Q ss_pred CCCCCCCeEEEEEEEccccCCCCce------eeEEecCC-----CCCcEEEEEEEEEec
Q 003259 687 NALLASSSIGDCVVEYQRLPPNQMA------DKWIPLQG-----VRKGEIHVLITRKVP 734 (835)
Q Consensus 687 d~~~~d~~iG~~~i~l~~l~~~~~~------~~w~~L~~-----~~~G~i~l~l~~~~p 734 (835)
+.+++|++||++.+++.++..+... .+||+|.. ...|+|+++++| +|
T Consensus 96 d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~-~P 153 (153)
T 3b7y_A 96 NRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTY-LP 153 (153)
T ss_dssp CSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEE-CC
T ss_pred CCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEE-eC
Confidence 9999999999999999998765432 59999954 346999999998 54
No 17
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.79 E-value=7.5e-19 Score=169.95 Aligned_cols=120 Identities=23% Similarity=0.361 Sum_probs=104.9
Q ss_pred CCCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEEC-----CeEeeeeeecCCCC
Q 003259 589 VNTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYG-----DLKKRTKVIFKTLN 663 (835)
Q Consensus 589 ~~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~-----~~~~kT~v~~~t~n 663 (835)
...|++.+++.|. +..+.|+|+|++|++|+..+ .|.+||||++++. ..+++|+++++|+|
T Consensus 11 ~~~G~~~lsL~y~--------------~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~n 75 (153)
T 3fbk_A 11 KVQGAGQLRLSID--------------AQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRD 75 (153)
T ss_dssp --CCCCEEEEEEE--------------ESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSS
T ss_pred CCCCEEEEEEEEE--------------CCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCC
Confidence 3579999999998 67799999999999999998 6999999999992 35789999999999
Q ss_pred CeeeeEEEeecC----CCcEEEEEEECCCCCC-CCeEEEEEEEccccCC-CCceeeEEecCCCCCc
Q 003259 664 PQWHQTLEFPDD----GSPLTLHVRDHNALLA-SSSIGDCVVEYQRLPP-NQMADKWIPLQGVRKG 723 (835)
Q Consensus 664 P~wne~f~f~v~----~~~L~i~V~d~d~~~~-d~~iG~~~i~l~~l~~-~~~~~~w~~L~~~~~G 723 (835)
|+|||+|.|.+. ...|.|+|||++.+++ |++||++.+++.++.. +....+||+|.+...|
T Consensus 76 P~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 76 PAFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLG 141 (153)
T ss_dssp CEEEEEEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGG
T ss_pred CccccEEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhc
Confidence 999999999983 4569999999999887 9999999999999974 6788999999876544
No 18
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.79 E-value=4.5e-19 Score=168.87 Aligned_cols=119 Identities=25% Similarity=0.447 Sum_probs=106.3
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEE-----CCeEeeeeeecCCCCC
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY-----GDLKKRTKVIFKTLNP 664 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~v~~~t~nP 664 (835)
..|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++ +..+++|+++++|+||
T Consensus 6 ~~G~i~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP 71 (141)
T 1v27_A 6 SGGQLSIKLWFD--------------KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEP 71 (141)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSC
T ss_pred cccEEEEEEEEe--------------CCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCC
Confidence 469999999998 567999999999999999999999999999999 3468899999999999
Q ss_pred eeeeEEEeec-C-----CCcEEEEEEECCCCCC--CCeEEEEEEEccccCCCCceeeEEecCCCCCc
Q 003259 665 QWHQTLEFPD-D-----GSPLTLHVRDHNALLA--SSSIGDCVVEYQRLPPNQMADKWIPLQGVRKG 723 (835)
Q Consensus 665 ~wne~f~f~v-~-----~~~L~i~V~d~d~~~~--d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~G 723 (835)
+|||+|.|.+ . ...|.|+|||++.+++ +++||++.+++.++.... ..+||+|.+...|
T Consensus 72 ~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~g 137 (141)
T 1v27_A 72 KWNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDSG 137 (141)
T ss_dssp CCCCCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSSC
T ss_pred ccccEEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcccccC
Confidence 9999999994 2 4789999999999987 999999999999986654 8899999865544
No 19
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.79 E-value=2.7e-19 Score=172.12 Aligned_cols=117 Identities=22% Similarity=0.363 Sum_probs=105.5
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCC-cCCCCCCEEEEEEC-----CeEeeeeeecCCCC
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAAD-LRGTSDPYVKVQYG-----DLKKRTKVIFKTLN 663 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d-~~g~~DPyv~v~~~-----~~~~kT~v~~~t~n 663 (835)
..|+|.++++|. +..+.|+|+|++|++|+..+ ..|.+||||++++. ..+++|+++++|+|
T Consensus 8 ~~G~l~~sl~y~--------------~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~n 73 (148)
T 3fdw_A 8 VTGRIAFSLKYE--------------QQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVN 73 (148)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSS
T ss_pred cceEEEEEEEEe--------------CCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCC
Confidence 369999999998 67899999999999999888 68999999999995 24789999999999
Q ss_pred CeeeeEEEeecC-----CCcEEEEEEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCC
Q 003259 664 PQWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGV 720 (835)
Q Consensus 664 P~wne~f~f~v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 720 (835)
|+|||+|.|.+. ...|.|+|||+|.+++|++||++.++|.++..+....+||+|+++
T Consensus 74 P~wne~f~f~v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 74 PLYDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp CEEEEEEEEECCSTTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC
T ss_pred CcEeeEEEEEeChhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCc
Confidence 999999999985 345999999999999999999999999999777778899999864
No 20
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.79 E-value=1.5e-18 Score=163.84 Aligned_cols=105 Identities=24% Similarity=0.376 Sum_probs=93.7
Q ss_pred cceEEEEEEEEeecCCcCCcCCCCCCEEEEEE-----CCeEeeeeeecCCCCCeeeeEEEee-cC-----CCcEEEEEEE
Q 003259 617 GNGWIELVIVEARDLVAADLRGTSDPYVKVQY-----GDLKKRTKVIFKTLNPQWHQTLEFP-DD-----GSPLTLHVRD 685 (835)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~v~~~t~nP~wne~f~f~-v~-----~~~L~i~V~d 685 (835)
..+.|+|+|++|++|+. +.+|.+||||++++ ...++||+++++|+||+|||+|.|. +. ...|.|+|||
T Consensus 18 ~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d 96 (134)
T 2b3r_A 18 RNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLS 96 (134)
T ss_dssp ETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEE
T ss_pred cCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEE
Confidence 45899999999999997 77899999999999 3468899999999999999999999 64 4789999999
Q ss_pred CCCCCCCCeEEEEEEEccccCCCCceeeEEecCCCCC
Q 003259 686 HNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVRK 722 (835)
Q Consensus 686 ~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~ 722 (835)
+|.++++++||++.++|.++..+....+||+|.+...
T Consensus 97 ~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~ 133 (134)
T 2b3r_A 97 AESLRENFFLGGITLPLKDFNLSKETVKWYQLTAATY 133 (134)
T ss_dssp CCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC---
T ss_pred CCCCCCCcEEEEEEEEhhhccCCCCcceeEECCCccC
Confidence 9999999999999999999988888999999987543
No 21
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.78 E-value=1.5e-18 Score=164.83 Aligned_cols=115 Identities=18% Similarity=0.256 Sum_probs=102.5
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEEC---C-eEeeeeeecCCCCCe
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYG---D-LKKRTKVIFKTLNPQ 665 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~---~-~~~kT~v~~~t~nP~ 665 (835)
..|+|.+++.|. ...+.|+|+|++|+ ++|..|.+||||++++. + .+++|+++++|+||+
T Consensus 11 ~~G~l~~sl~y~--------------~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~ 73 (138)
T 1wfm_A 11 QAPKLHYCLDYD--------------CQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTT 73 (138)
T ss_dssp SCCEEEEEEEEE--------------TTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEE
T ss_pred cceEEEEEEEEe--------------CCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCc
Confidence 369999999998 67799999999999 46788999999999993 2 368999999999999
Q ss_pred eeeEEEeecC-----CCcEEEEEEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCCC
Q 003259 666 WHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR 721 (835)
Q Consensus 666 wne~f~f~v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~ 721 (835)
|||+|.|.+. ...|.|+|||+|.+++|++||++.++|.++..+....+|++|.+..
T Consensus 74 wnE~f~f~v~~~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 74 WEEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp CSSCEEEECCTTSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred CCceEEEEecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 9999999975 4579999999999999999999999999998777889999998643
No 22
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.78 E-value=9.2e-19 Score=165.81 Aligned_cols=113 Identities=25% Similarity=0.432 Sum_probs=100.6
Q ss_pred cceEEEEEEEEeecCCcCCcCCC-----------CCCEEEEEECCeE-eeeeeecCCCCCeeeeEEEeecC-CCcEEEEE
Q 003259 617 GNGWIELVIVEARDLVAADLRGT-----------SDPYVKVQYGDLK-KRTKVIFKTLNPQWHQTLEFPDD-GSPLTLHV 683 (835)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~d~~g~-----------~DPyv~v~~~~~~-~kT~v~~~t~nP~wne~f~f~v~-~~~L~i~V 683 (835)
..|.|+|+|++|++|++.|..+. +||||++.+++.. .+|+++++|+||+|||+|.|.+. ...|.|+|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~L~~~V 83 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNGRKIELAV 83 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEECEEEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCCCEEEEEE
Confidence 46899999999999998885544 9999999998764 69999999999999999999985 57899999
Q ss_pred EECCCCCCCCeEEEEEEEccccCCC--CceeeEEecCCCCCcEEEEEEEE
Q 003259 684 RDHNALLASSSIGDCVVEYQRLPPN--QMADKWIPLQGVRKGEIHVLITR 731 (835)
Q Consensus 684 ~d~d~~~~d~~iG~~~i~l~~l~~~--~~~~~w~~L~~~~~G~i~l~l~~ 731 (835)
||+|.+++|++||++.+++.++..+ ...+.|++|++ +|+|+++++|
T Consensus 84 ~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--~G~i~l~l~~ 131 (136)
T 1gmi_A 84 FHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--EGKVYVIIDL 131 (136)
T ss_dssp EECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--SCEEEEEEEE
T ss_pred EeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--CeEEEEEEEE
Confidence 9999999999999999999998764 34589999985 8999999998
No 23
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=1.9e-18 Score=164.89 Aligned_cols=116 Identities=26% Similarity=0.417 Sum_probs=103.9
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECC-----eEeeeeeecCCCCC
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD-----LKKRTKVIFKTLNP 664 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~v~~~t~nP 664 (835)
..|+|.+++.|. +..+.|+|+|++|++|+..+..| +||||++++.+ .+++|+++++|+||
T Consensus 9 ~~G~l~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP 73 (142)
T 2dmg_A 9 PLGQIQLTIRHS--------------SQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNP 73 (142)
T ss_dssp SSCEEEEEEEEE--------------TTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSC
T ss_pred CcceEEEEEEEe--------------CCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCC
Confidence 369999999998 67799999999999999999999 99999999932 57899999999999
Q ss_pred eeeeEEEeecC-----CCcEEEEEEECCCCCC--CCeEEEEEEEccccCCCCceeeEEecCCC
Q 003259 665 QWHQTLEFPDD-----GSPLTLHVRDHNALLA--SSSIGDCVVEYQRLPPNQMADKWIPLQGV 720 (835)
Q Consensus 665 ~wne~f~f~v~-----~~~L~i~V~d~d~~~~--d~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 720 (835)
+|||+|.|.+. ...|.|+|||++.++. +++||++.++|..+..+....+|++|.+.
T Consensus 74 ~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 74 VFDQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp EEEEEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred CcCceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 99999999985 3589999999998864 57999999999999877788999999754
No 24
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.77 E-value=2.8e-18 Score=170.02 Aligned_cols=120 Identities=28% Similarity=0.395 Sum_probs=97.5
Q ss_pred CCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECC------eEeeeeeecCCCCCeeeeEEEeecC--CCcEEEEEEEC
Q 003259 615 GSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD------LKKRTKVIFKTLNPQWHQTLEFPDD--GSPLTLHVRDH 686 (835)
Q Consensus 615 ~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~v~~~t~nP~wne~f~f~v~--~~~L~i~V~d~ 686 (835)
+...|.|+|+|++|++|+..+..|.+||||++++++ .+++|+++++++||+|||+|.|.+. ...|.|+|||+
T Consensus 4 ~~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~ 83 (176)
T 3m7f_B 4 NDDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDE 83 (176)
T ss_dssp CTTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEEC
T ss_pred CCCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEEC
Confidence 456799999999999999999999999999999965 5789999999999999999999985 46899999999
Q ss_pred CCCCCCCeEEEEEEEccccCCCCce------eeEEecCC-----CCCcEEEEEEEEEecC
Q 003259 687 NALLASSSIGDCVVEYQRLPPNQMA------DKWIPLQG-----VRKGEIHVLITRKVPE 735 (835)
Q Consensus 687 d~~~~d~~iG~~~i~l~~l~~~~~~------~~w~~L~~-----~~~G~i~l~l~~~~p~ 735 (835)
+.+++|++||++.|+|..+..+... .+||+|.. ..+|+|+++++| +|.
T Consensus 84 d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~-~p~ 142 (176)
T 3m7f_B 84 NRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTY-LPK 142 (176)
T ss_dssp C----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEE-CC-
T ss_pred CCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEE-EeC
Confidence 9999999999999999999765432 28999964 246999999999 665
No 25
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.77 E-value=2.8e-18 Score=163.74 Aligned_cols=116 Identities=28% Similarity=0.404 Sum_probs=106.7
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECC-----eEeeeeeecCCCCC
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD-----LKKRTKVIFKTLNP 664 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~v~~~t~nP 664 (835)
..|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++++ .+++|+++++|+||
T Consensus 14 ~~G~l~~~l~y~--------------~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP 79 (142)
T 2chd_A 14 TLGALEFSLLYD--------------QDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNP 79 (142)
T ss_dssp CCCEEEEEEEEE--------------GGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSC
T ss_pred ccceEEEEEEEe--------------CCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCC
Confidence 369999999998 67799999999999999999999999999999964 68899999999999
Q ss_pred eeeeEEEee-cC-----CCcEEEEEEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCC
Q 003259 665 QWHQTLEFP-DD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQG 719 (835)
Q Consensus 665 ~wne~f~f~-v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~ 719 (835)
+|||+|.|. +. ...|.|+|||++.+++|++||++.+++.++..+.....|++|+.
T Consensus 80 ~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 80 VWNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEEEEEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred cCcCEEEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 999999998 54 37899999999999999999999999999998888899999875
No 26
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=6.2e-19 Score=168.21 Aligned_cols=116 Identities=33% Similarity=0.524 Sum_probs=104.5
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCe--------------Eeee
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDL--------------KKRT 655 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~--------------~~kT 655 (835)
..|+|.+++.|. .+.|+|+|++|++|+..|..|.+||||++++++. +++|
T Consensus 5 ~~G~i~~~l~y~----------------~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT 68 (142)
T 1rh8_A 5 ITGEIQLQINYD----------------LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRT 68 (142)
T ss_dssp CCCEEEEEEEEE----------------TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTT
T ss_pred cceEEEEEEEEc----------------CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeec
Confidence 479999999986 3799999999999999999999999999999752 5799
Q ss_pred eeecCCCCCeeeeEEEee-cC-----CCcEEEEEEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCCC
Q 003259 656 KVIFKTLNPQWHQTLEFP-DD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR 721 (835)
Q Consensus 656 ~v~~~t~nP~wne~f~f~-v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~ 721 (835)
+++++|+||+|||+|.|. +. ...|.|+|||+|.+++|++||++.++|.++..+....+||+|.+..
T Consensus 69 ~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 69 KYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp TTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred cccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 999999999999999997 53 5789999999999999999999999999997767788999998654
No 27
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.77 E-value=8.4e-19 Score=168.82 Aligned_cols=119 Identities=28% Similarity=0.472 Sum_probs=105.5
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEEC-----CeEeeeeeecCCCCC
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYG-----DLKKRTKVIFKTLNP 664 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~-----~~~~kT~v~~~t~nP 664 (835)
..|+|.+++.|. .+.|+|+|++|++|+..+..|.+||||++++. ..+++|+++++|+||
T Consensus 18 ~~G~l~~~l~~~----------------~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP 81 (149)
T 1a25_A 18 RRGRIYIQAHID----------------REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNP 81 (149)
T ss_dssp TTCEEEEEEEES----------------SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSC
T ss_pred cceEEEEEEEec----------------CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCC
Confidence 369999999874 27899999999999999999999999999996 368899999999999
Q ss_pred eeeeEEEeecC----CCcEEEEEEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCCCCcEE
Q 003259 665 QWHQTLEFPDD----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVRKGEI 725 (835)
Q Consensus 665 ~wne~f~f~v~----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i 725 (835)
+|||+|.|.+. ...|.|+|||+|.+++|++||++.+++.++..+ ..++||+|.+...|++
T Consensus 82 ~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 82 EWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQEEGEY 145 (149)
T ss_dssp EEEEEEEEECCSGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHHTT
T ss_pred cCCcEEEEEeccccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCCcc
Confidence 99999999985 357999999999999999999999999999765 4889999987655543
No 28
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.77 E-value=2.2e-18 Score=165.44 Aligned_cols=117 Identities=24% Similarity=0.278 Sum_probs=104.2
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcC-Cc------CCCCCCEEEEEEC---CeEeeeeeec
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAA-DL------RGTSDPYVKVQYG---DLKKRTKVIF 659 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~-d~------~g~~DPyv~v~~~---~~~~kT~v~~ 659 (835)
..|+|.+++.|. +..+.|+|+|++|++|+.. +. .|.+||||++++. ..+++|++++
T Consensus 11 ~~G~l~~~l~y~--------------~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~ 76 (147)
T 2enp_A 11 QLGMLHFSTQYD--------------LLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKR 76 (147)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCC
T ss_pred cceEEEEEEEEc--------------CCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeeccc
Confidence 469999999998 6779999999999999984 43 3589999999995 3578999999
Q ss_pred CCCCCeeeeEEEeecC-----CCcEEEEEEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCC
Q 003259 660 KTLNPQWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGV 720 (835)
Q Consensus 660 ~t~nP~wne~f~f~v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 720 (835)
+|+||+|||+|.|.+. ...|.|+|||++.++++++||++.++|.++........|++|++.
T Consensus 77 ~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 77 KTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp SCSSCCCCBCCEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred CCCCCeEeeeEEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 9999999999999986 358999999999999999999999999999877777899999754
No 29
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.76 E-value=1.4e-18 Score=164.53 Aligned_cols=117 Identities=28% Similarity=0.506 Sum_probs=104.4
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEE-----CCeEeeeeeecCCCCC
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY-----GDLKKRTKVIFKTLNP 664 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~v~~~t~nP 664 (835)
..|+|.++++|. .+.|+|+|++|++|+..+..|.+||||++.+ +..+++|+++++|+||
T Consensus 3 ~~G~l~~~l~~~----------------~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP 66 (137)
T 3rdl_A 3 KRGRIYLKAEVT----------------DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNP 66 (137)
T ss_dssp CCCEEEEEEEEE----------------TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSC
T ss_pred cceEEEEEEEEc----------------CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCC
Confidence 469999999984 2899999999999999999999999999999 4568999999999999
Q ss_pred eeeeEEEeecC----CCcEEEEEEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCCCCc
Q 003259 665 QWHQTLEFPDD----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVRKG 723 (835)
Q Consensus 665 ~wne~f~f~v~----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~G 723 (835)
+|||+|.|.+. ...|.|+|||++.+++|++||++.++++++..+. ..+||+|.+...|
T Consensus 67 ~wne~f~f~~~~~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g 128 (137)
T 3rdl_A 67 QWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEG 128 (137)
T ss_dssp EEEEEEEEECCGGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHH
T ss_pred CcccEEEEEcCchhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCcccc
Confidence 99999999985 3579999999999999999999999999996654 8899999865444
No 30
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.76 E-value=7.3e-18 Score=164.08 Aligned_cols=118 Identities=28% Similarity=0.476 Sum_probs=104.3
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECC-----eEeeeeeecCCCCC
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD-----LKKRTKVIFKTLNP 664 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~v~~~t~nP 664 (835)
..|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++++ .+++|+++++|+||
T Consensus 10 ~~G~l~~~l~y~--------------~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP 75 (159)
T 1tjx_A 10 KLGDICFSLRYV--------------PTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNP 75 (159)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSC
T ss_pred cCCeEEEEEEEc--------------CCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCC
Confidence 469999999998 67799999999999999999999999999999952 47899999999999
Q ss_pred eeeeEEEeecC-----CCcEEEEEEECCCCCCCCeEEEEEEEcccc------------CCCCceeeEEecCCCC
Q 003259 665 QWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRL------------PPNQMADKWIPLQGVR 721 (835)
Q Consensus 665 ~wne~f~f~v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l------------~~~~~~~~w~~L~~~~ 721 (835)
+|||+|.|.+. ...|.|+|||+|.+++|++||++.+++..+ ..+....+||+|.+..
T Consensus 76 ~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~~ 149 (159)
T 1tjx_A 76 YYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEE 149 (159)
T ss_dssp EEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCHH
T ss_pred cccceEEEEcCHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCcc
Confidence 99999999985 357999999999999999999999999853 3456788999997643
No 31
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.76 E-value=4.1e-18 Score=161.55 Aligned_cols=114 Identities=32% Similarity=0.485 Sum_probs=100.6
Q ss_pred CceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECC-----eEeeeeeecCCCCCe
Q 003259 591 TGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD-----LKKRTKVIFKTLNPQ 665 (835)
Q Consensus 591 ~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~v~~~t~nP~ 665 (835)
.|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++++ .+++|+++++|+||+
T Consensus 2 ~G~l~~sl~y~--------------~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~ 67 (138)
T 3n5a_A 2 RGELLLSLCYN--------------PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPI 67 (138)
T ss_dssp CCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCE
T ss_pred CcEEEEEEEEc--------------CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCc
Confidence 59999999998 67799999999999999999999999999999953 478999999999999
Q ss_pred eeeEEEeecC-----CCcEEEEEEECCCCCCCCeEEEEEEEccccC------------CCCceeeEEecC
Q 003259 666 WHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLP------------PNQMADKWIPLQ 718 (835)
Q Consensus 666 wne~f~f~v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~------------~~~~~~~w~~L~ 718 (835)
|||+|.|.+. ...|.|+|||++.+++|++||++.+++.++. ++....+|++|.
T Consensus 68 wne~f~f~v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~ 137 (138)
T 3n5a_A 68 FNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPGEVKHWKDMIARPRQPVAQWHQLK 137 (138)
T ss_dssp EEEEEEEECCGGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSCHHHHHHHHHHHHSTTCCEEEEEECB
T ss_pred CcceEEEECChhhcCceEEEEEEEECCCCCCCcEEEEEEEccccCChHHHHHHHHHhCCCCeEEEEeecC
Confidence 9999999985 2579999999999999999999999998642 445667777774
No 32
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=7.8e-18 Score=159.79 Aligned_cols=117 Identities=24% Similarity=0.275 Sum_probs=103.3
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcC-CCCCCEEEEEEC---CeEeeeeeecCCCCCe
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLR-GTSDPYVKVQYG---DLKKRTKVIFKTLNPQ 665 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~-g~~DPyv~v~~~---~~~~kT~v~~~t~nP~ 665 (835)
..|+|.+++.|. +..+.|+|+|++|++|+..+.. |.+||||++++. ..+++|+++++|+||+
T Consensus 7 ~~G~l~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~ 72 (138)
T 1ugk_A 7 GLGTLFFSLEYN--------------FERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPA 72 (138)
T ss_dssp CCCEEEEEEEEE--------------GGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCE
T ss_pred ccEEEEEEEEEE--------------CCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCc
Confidence 369999999998 6779999999999999999985 899999999995 3689999999999999
Q ss_pred eeeEEEee-cC-----CCcEEEEEEECCCCCCCCeEEEEEEEccccCCCC-ceeeEEecCCC
Q 003259 666 WHQTLEFP-DD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQ-MADKWIPLQGV 720 (835)
Q Consensus 666 wne~f~f~-v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~-~~~~w~~L~~~ 720 (835)
|||+|.|. +. ...|.|+|||+|.+++|++||++.++|.++..+. ....|++|+..
T Consensus 73 wne~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 73 FDETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp EEEEEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred EeeEEEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 99999995 54 3689999999999999999999999999997654 34677999753
No 33
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.75 E-value=1.1e-17 Score=163.97 Aligned_cols=116 Identities=24% Similarity=0.407 Sum_probs=102.1
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECC-----eEeeeeeecCCCCC
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD-----LKKRTKVIFKTLNP 664 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~-----~~~kT~v~~~t~nP 664 (835)
..|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++++ .+++|+++++|+||
T Consensus 22 ~~G~l~~~l~y~--------------~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP 87 (166)
T 2cm5_A 22 ERGKILVSLMYS--------------TQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNP 87 (166)
T ss_dssp CCCEEEEEEEEE--------------TTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSC
T ss_pred ccceEEEEEEEE--------------CCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCC
Confidence 469999999998 67799999999999999999999999999999965 68899999999999
Q ss_pred eeeeEEEeecC-----CCcEEEEEEECCCCCCCCeEEEEEEEccccC------------CCCceeeEEecCC
Q 003259 665 QWHQTLEFPDD-----GSPLTLHVRDHNALLASSSIGDCVVEYQRLP------------PNQMADKWIPLQG 719 (835)
Q Consensus 665 ~wne~f~f~v~-----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~------------~~~~~~~w~~L~~ 719 (835)
+|||+|.|.+. ...|.|+|||++.+++|++||++.+++..+. .+....+|++|.+
T Consensus 88 ~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~ 159 (166)
T 2cm5_A 88 EFNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQN 159 (166)
T ss_dssp EEEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC
T ss_pred cccceEEEEcchHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCC
Confidence 99999999985 4589999999999999999999999998752 3445666776654
No 34
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.75 E-value=5.2e-18 Score=159.70 Aligned_cols=116 Identities=20% Similarity=0.302 Sum_probs=99.9
Q ss_pred CcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECC--eEeeeeeecCCCCCeeeeEEEeecC-CCcEEEEEEECCCCCC-
Q 003259 616 SGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD--LKKRTKVIFKTLNPQWHQTLEFPDD-GSPLTLHVRDHNALLA- 691 (835)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~--~~~kT~v~~~t~nP~wne~f~f~v~-~~~L~i~V~d~d~~~~- 691 (835)
.....|+|+|++|++|+..|..|.+||||++++++ ++++|+++++|+||+|||+|.|.+. ...|.|+|||++.+++
T Consensus 2 ~~~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~l~~~v~d~d~~~~~ 81 (132)
T 3pyc_A 2 SEFIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKK 81 (132)
T ss_dssp CSEEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTCCEEEEEEEGGGTTSS
T ss_pred CCeEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCCEEEEEEEECCCCCCC
Confidence 34578999999999999999999999999999965 7899999999999999999999975 4569999999999876
Q ss_pred --CCeEEEEEEEcccc-CCCCceeeEEecCCC-------CCcEEEEEEEE
Q 003259 692 --SSSIGDCVVEYQRL-PPNQMADKWIPLQGV-------RKGEIHVLITR 731 (835)
Q Consensus 692 --d~~iG~~~i~l~~l-~~~~~~~~w~~L~~~-------~~G~i~l~l~~ 731 (835)
|++||++.++++.+ .......+|++|... ..|+|+++++.
T Consensus 82 ~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 82 QGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 89999999999988 333344688999642 36999999875
No 35
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.75 E-value=6.3e-18 Score=166.57 Aligned_cols=116 Identities=28% Similarity=0.430 Sum_probs=102.8
Q ss_pred CCCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCc-CCCCCCEEEEEECC-----eEeeeeeecCCC
Q 003259 589 VNTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADL-RGTSDPYVKVQYGD-----LKKRTKVIFKTL 662 (835)
Q Consensus 589 ~~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~-~g~~DPyv~v~~~~-----~~~kT~v~~~t~ 662 (835)
...|+|.+++.|. .+.|.|+|++|++|+.+|. .|.+||||++++.+ .+++|+++++|+
T Consensus 16 ~~~G~l~~~l~y~----------------~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~ 79 (171)
T 2q3x_A 16 PAMGDIQIGMEDK----------------KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTL 79 (171)
T ss_dssp -CCCEEEEEEEEE----------------TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCS
T ss_pred CCccEEEEEEEEC----------------CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCC
Confidence 3469999999983 3899999999999999985 79999999999953 378999999999
Q ss_pred CCeeeeEEEeecC--CCcEEEEEE-ECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCC
Q 003259 663 NPQWHQTLEFPDD--GSPLTLHVR-DHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGV 720 (835)
Q Consensus 663 nP~wne~f~f~v~--~~~L~i~V~-d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 720 (835)
||+|||+|.|.+. ...|.|+|| |+|.+++|++||++.++|.++..+...++||+|.+.
T Consensus 80 nP~wne~f~f~v~~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 80 DPLYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp SCEEEEEEECSSCCTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCCcEEEEEecCCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9999999999985 568999999 999999999999999999999878889999999764
No 36
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.73 E-value=2.2e-17 Score=159.58 Aligned_cols=101 Identities=29% Similarity=0.342 Sum_probs=86.3
Q ss_pred CCceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEE--CCe---EeeeeeecCCCCC
Q 003259 590 NTGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY--GDL---KKRTKVIFKTLNP 664 (835)
Q Consensus 590 ~~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~--~~~---~~kT~v~~~t~nP 664 (835)
..|+|.+++.|. +..+.|+|+|++|++|+..+..|.+||||++++ ++. +++|+++++|+||
T Consensus 15 ~~G~l~~~l~y~--------------~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP 80 (153)
T 1w15_A 15 GRGELLVSLCYQ--------------STTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNA 80 (153)
T ss_dssp -CCEEEEEEEEE--------------TTTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSE
T ss_pred cccEEEEEEEEc--------------CCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCC
Confidence 469999999998 677999999999999999999999999999999 333 6799999999999
Q ss_pred eeeeEEEeecCC-----CcEEEEEEECCCCCCCCeEEEEEEEccc
Q 003259 665 QWHQTLEFPDDG-----SPLTLHVRDHNALLASSSIGDCVVEYQR 704 (835)
Q Consensus 665 ~wne~f~f~v~~-----~~L~i~V~d~d~~~~d~~iG~~~i~l~~ 704 (835)
+|||+|.|.+.. ..|.|+|||+|.+++|++||++.++++.
T Consensus 81 ~wne~f~f~v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 81 VFNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp EEEEEEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred eecceEEEECCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 999999999852 5799999999999999999999999987
No 37
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.73 E-value=1.1e-17 Score=164.80 Aligned_cols=116 Identities=18% Similarity=0.249 Sum_probs=99.3
Q ss_pred CcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCeEeeeeeecCCCCCeeeeEEEeecC-CCcEEEEEEECCCCCCCCe
Q 003259 616 SGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIFKTLNPQWHQTLEFPDD-GSPLTLHVRDHNALLASSS 694 (835)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~-~~~L~i~V~d~d~~~~d~~ 694 (835)
...+.|+|+|++|++|+..+..+.+||||+++++++++||+++++|+||+|||+|.|.+. ...|.|+|||+|.+++|++
T Consensus 33 ~~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~~~~~L~~~V~D~d~~~~dd~ 112 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVTPVSKLHFRVWSHQTLKSDVL 112 (173)
T ss_dssp SCCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEECTTCEEEEEEEECCSSSCCEE
T ss_pred CCceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeCCCCEEEEEEEECCCCCCCce
Confidence 467899999999999995544455999999999999999999999999999999999986 6789999999999999999
Q ss_pred EEEEEEEccccCCC-----CceeeEEecCCC-----CCcEEEEEEEE
Q 003259 695 IGDCVVEYQRLPPN-----QMADKWIPLQGV-----RKGEIHVLITR 731 (835)
Q Consensus 695 iG~~~i~l~~l~~~-----~~~~~w~~L~~~-----~~G~i~l~l~~ 731 (835)
||++.+++.++..+ .....|++|... ..|+|++++++
T Consensus 113 lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~ 159 (173)
T 2nq3_A 113 LGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDG 159 (173)
T ss_dssp EEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEES
T ss_pred EEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEee
Confidence 99999999988432 123679999643 36999999998
No 38
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.72 E-value=5.3e-17 Score=156.48 Aligned_cols=111 Identities=22% Similarity=0.355 Sum_probs=97.9
Q ss_pred cEEEEEEEEeecCCCCCC----------CCCCCcEEEEEECCe-Eeecccc-CCCCCccceEEEEEeeCCceeEEEEEEE
Q 003259 488 RKINVTVVEGKDLMPKDK----------SGKCDPYVKLQYGKI-VQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYN 555 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~----------~g~~dpyv~v~lg~~-~~kT~~~-~t~nP~Wne~f~f~v~~~~~~L~i~V~d 555 (835)
|.|+|+|++|++|+++|. .|.+||||+++++++ ..+|+++ ++.||.|||+|+|.+.. ...|.|+|||
T Consensus 29 g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~-~~~L~~~V~D 107 (157)
T 2fk9_A 29 GYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD-GGHLELAVFH 107 (157)
T ss_dssp EEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE-ECEEEEEEEE
T ss_pred cEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC-CCEEEEEEEE
Confidence 589999999999988772 367999999999775 4799999 99999999999999754 5689999999
Q ss_pred eccC-CCceEEEEEEeccccccC----CeeeeEEecccCCCceEEEEEEEe
Q 003259 556 EEIF-GDENMGSARVNLEGLVEG----SVRDIWVPLEKVNTGELRLQIEAT 601 (835)
Q Consensus 556 ~d~~-~d~~IG~~~i~L~~l~~~----~~~~~w~~L~~~~~G~I~l~l~~~ 601 (835)
++.. +|++||++.++|.++..+ ...+.||+|++ +|+|+++++|.
T Consensus 108 ~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--~G~i~l~l~~~ 156 (157)
T 2fk9_A 108 ETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--EGKVFVVITLT 156 (157)
T ss_dssp CCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--SCEEEEEEEEC
T ss_pred CCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--CcEEEEEEEEE
Confidence 9987 799999999999999865 56789999985 79999999884
No 39
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.70 E-value=7.1e-17 Score=150.50 Aligned_cols=114 Identities=24% Similarity=0.356 Sum_probs=101.2
Q ss_pred cEEEEEEEEeecCCCC---CCCCCCCcEEEEEEC---CeEeecccc-CCCCCccceEEEEEeeC-CceeEEEEEEEeccC
Q 003259 488 RKINVTVVEGKDLMPK---DKSGKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELDEIG-GGECLMVKCYNEEIF 559 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~---~~~g~~dpyv~v~lg---~~~~kT~~~-~t~nP~Wne~f~f~v~~-~~~~L~i~V~d~d~~ 559 (835)
+.|.|+|++|++|+.+ +..|.+||||+++++ +..++|+++ ++.||.|||+|.|.+.. ....|.|+|||++..
T Consensus 3 ~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~~ 82 (126)
T 1rlw_A 3 HKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANYV 82 (126)
T ss_dssp EEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCSS
T ss_pred cEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCCC
Confidence 4899999999999874 556899999999996 378999999 99999999999999854 467899999999987
Q ss_pred CCceEEEEEEeccccccCCeeeeEEecccCCCceEEEEEEEe
Q 003259 560 GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGELRLQIEAT 601 (835)
Q Consensus 560 ~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~~G~I~l~l~~~ 601 (835)
++++||++.++|.++..+.....|++|.+.++|+|+++++..
T Consensus 83 ~~~~iG~~~i~l~~l~~~~~~~~~~~L~~~~~g~i~~~le~~ 124 (126)
T 1rlw_A 83 MDETLGTATFTVSSMKVGEKKEVPFIFNQVTEMVLEMSLEVA 124 (126)
T ss_dssp CCEEEEEEEEEGGGSCTTCEEEEEEEETTTEEEEEEEEEECC
T ss_pred CCceeEEEEEEHHHccCCCcEEEEEEcCCCceEEEEEEEEeC
Confidence 899999999999999988888999999987788888887644
No 40
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=1.9e-16 Score=150.44 Aligned_cols=115 Identities=23% Similarity=0.285 Sum_probs=102.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc-CCCCCccceEEEEEeeC----CceeEEEEEEEeccC-CC
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNEEIF-GD 561 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~~~~kT~~~-~t~nP~Wne~f~f~v~~----~~~~L~i~V~d~d~~-~d 561 (835)
+.|.|+|++|++|+..+. |.+||||+++++++.++|+++ ++.||.|||+|.|.+.. ....|.|+|||++.. ++
T Consensus 7 g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~~~~~ 85 (140)
T 2dmh_A 7 GMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFETIGQN 85 (140)
T ss_dssp CEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTCSSSC
T ss_pred cEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCCCCCC
Confidence 489999999999999888 999999999999889999999 99999999999999764 367899999999988 88
Q ss_pred ceEEEEEEeccccccCCeeeeEEe---cccC----CCceEEEEEEEeec
Q 003259 562 ENMGSARVNLEGLVEGSVRDIWVP---LEKV----NTGELRLQIEATRV 603 (835)
Q Consensus 562 ~~IG~~~i~L~~l~~~~~~~~w~~---L~~~----~~G~I~l~l~~~~~ 603 (835)
++||++.++|.++..+.....|++ |.+. ..|+|++++.|.+.
T Consensus 86 ~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~ 134 (140)
T 2dmh_A 86 KLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPP 134 (140)
T ss_dssp CCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCC
T ss_pred ceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECC
Confidence 999999999999988887788987 6443 24999999999963
No 41
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.70 E-value=1.5e-16 Score=149.77 Aligned_cols=112 Identities=24% Similarity=0.361 Sum_probs=101.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc-CCCCCccceEEEEEeeCCceeEEEEEEEeccC-CCceEE
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-GDENMG 565 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~~~~kT~~~-~t~nP~Wne~f~f~v~~~~~~L~i~V~d~d~~-~d~~IG 565 (835)
+.|.|+|++|++|+..+..|.+||||+++++++.++|+++ ++.||.|||+|.|.+.+....|.|+|||++.. ++++||
T Consensus 13 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d~d~~~~~~~lG 92 (133)
T 2ep6_A 13 GILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPDFLG 92 (133)
T ss_dssp EEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEEEETTEEEEECC
T ss_pred eEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEECCCCCCCCeeE
Confidence 4999999999999999988999999999999999999999 99999999999999887778899999999988 799999
Q ss_pred EEEEeccccccCCeeeeEEecccC-----CCceEEEEEEEe
Q 003259 566 SARVNLEGLVEGSVRDIWVPLEKV-----NTGELRLQIEAT 601 (835)
Q Consensus 566 ~~~i~L~~l~~~~~~~~w~~L~~~-----~~G~I~l~l~~~ 601 (835)
++.++|.++..+. ..|++|... ..|+|+++++|.
T Consensus 93 ~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 93 KVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDLI 131 (133)
T ss_dssp BCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEEE
T ss_pred EEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEEE
Confidence 9999999997654 489999753 469999999886
No 42
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.70 E-value=1.2e-16 Score=151.18 Aligned_cols=119 Identities=24% Similarity=0.358 Sum_probs=105.3
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc--CCCCCccceEEEEEeeCCceeEEEEEEEeccC-CCce
Q 003259 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA--HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-GDEN 563 (835)
Q Consensus 487 g~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~~~~kT~~~--~t~nP~Wne~f~f~v~~~~~~L~i~V~d~d~~-~d~~ 563 (835)
.+.|.|+|++|++|+..+..|.+||||+++++++.++|+++ ++.||.|||+|.|.+......|.|+|||++.. +|++
T Consensus 9 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~~~~~d~~ 88 (136)
T 1wfj_A 9 HGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDA 88 (136)
T ss_dssp EEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSSSCTTTCC
T ss_pred cEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECCCCCCCce
Confidence 35899999999999999888999999999998888999988 69999999999999888788999999999987 7999
Q ss_pred EEEEEEeccccc-cCCeeeeEEeccc--CCCceEEEEEEEeecCC
Q 003259 564 MGSARVNLEGLV-EGSVRDIWVPLEK--VNTGELRLQIEATRVDD 605 (835)
Q Consensus 564 IG~~~i~L~~l~-~~~~~~~w~~L~~--~~~G~I~l~l~~~~~~~ 605 (835)
||++.++|.++. .+.....||+|.. ...|+|++++.|.+...
T Consensus 89 lG~~~i~l~~l~~~~~~~~~w~~L~~~~~~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 89 VGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPSGP 133 (136)
T ss_dssp SEEEEEESHHHHHHSEEEEEEEEEEETTEEEEEEEEEEEEEECCS
T ss_pred EEEEEEEHHHhccCCCCCcEEEEeecCCccCEEEEEEEEEEeCCC
Confidence 999999999994 4555678999963 24699999999997653
No 43
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.70 E-value=3.7e-16 Score=150.02 Aligned_cols=112 Identities=33% Similarity=0.584 Sum_probs=101.4
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc-CCCCCccceEEEEEeeCCceeEEEEEEEeccC-------
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF------- 559 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~~~~kT~~~-~t~nP~Wne~f~f~v~~~~~~L~i~V~d~d~~------- 559 (835)
+.|.|+|++|++|+.++..|.+||||+++++++.++|+++ ++.||.|||+|.|.+..+...|.|+|||++..
T Consensus 17 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~~~~~~~ 96 (148)
T 3kwu_A 17 AKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDIKSRVKQ 96 (148)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSHHHHHHT
T ss_pred cEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCccccccc
Confidence 5899999999999999989999999999999999999999 99999999999999887778999999999973
Q ss_pred -----CCceEEEEEEeccccccCCeeeeEEecccC-----CCceEEEEEEEe
Q 003259 560 -----GDENMGSARVNLEGLVEGSVRDIWVPLEKV-----NTGELRLQIEAT 601 (835)
Q Consensus 560 -----~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~-----~~G~I~l~l~~~ 601 (835)
++++||++.++|.++ ......|++|... ..|+|+++++|.
T Consensus 97 ~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 97 RFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp TTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred cccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 799999999999998 3456799999853 359999999875
No 44
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.69 E-value=3.3e-16 Score=151.28 Aligned_cols=116 Identities=27% Similarity=0.340 Sum_probs=96.0
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeecccc-CCCCCccceEEEEEeeCCceeEEEEEEEeccC
Q 003259 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK------IVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF 559 (835)
Q Consensus 487 g~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~------~~~kT~~~-~t~nP~Wne~f~f~v~~~~~~L~i~V~d~d~~ 559 (835)
.+.|.|+|++|++|+..+..|.+||||+++++. ..++|+++ ++.||.|||+|.|.+......|.|+|||++..
T Consensus 19 ~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V~d~d~~ 98 (153)
T 3b7y_A 19 SRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDENRL 98 (153)
T ss_dssp CEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEEEECCSS
T ss_pred ccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEEEECCCC
Confidence 358999999999999988889999999999942 68999999 99999999999999877778999999999988
Q ss_pred -CCceEEEEEEeccccccCCee------eeEEecccC-----CCceEEEEEEEee
Q 003259 560 -GDENMGSARVNLEGLVEGSVR------DIWVPLEKV-----NTGELRLQIEATR 602 (835)
Q Consensus 560 -~d~~IG~~~i~L~~l~~~~~~------~~w~~L~~~-----~~G~I~l~l~~~~ 602 (835)
++++||++.++|.++..+... ..||+|... ..|+|++++.|.|
T Consensus 99 ~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 99 TRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLP 153 (153)
T ss_dssp SCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEECC
T ss_pred cCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEEeC
Confidence 899999999999999866532 589999653 3699999999974
No 45
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.67 E-value=4.1e-16 Score=147.45 Aligned_cols=112 Identities=20% Similarity=0.411 Sum_probs=97.3
Q ss_pred cEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEECCe-Eeecccc-CCCCCccceEEEEEeeCCceeEEEEEE
Q 003259 488 RKINVTVVEGKDLMPKDKSGK-----------CDPYVKLQYGKI-VQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCY 554 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~-----------~dpyv~v~lg~~-~~kT~~~-~t~nP~Wne~f~f~v~~~~~~L~i~V~ 554 (835)
+.|.|+|++|++|++.+..+. +||||++++++. ..+|+++ ++.||.|||+|+|.+... ..|.|+||
T Consensus 6 g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~-~~L~~~V~ 84 (136)
T 1gmi_A 6 GLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG-RKIELAVF 84 (136)
T ss_dssp EEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-CEEEEEEE
T ss_pred eEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-CEEEEEEE
Confidence 589999999999988774433 999999999765 4799999 999999999999997655 78999999
Q ss_pred EeccC-CCceEEEEEEeccccccCC--eeeeEEecccCCCceEEEEEEEee
Q 003259 555 NEEIF-GDENMGSARVNLEGLVEGS--VRDIWVPLEKVNTGELRLQIEATR 602 (835)
Q Consensus 555 d~d~~-~d~~IG~~~i~L~~l~~~~--~~~~w~~L~~~~~G~I~l~l~~~~ 602 (835)
|++.. +|++||++.+++.++..+. ..+.|++|++ .|+|+++++|.+
T Consensus 85 d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--~G~i~l~l~~~~ 133 (136)
T 1gmi_A 85 HDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--EGKVYVIIDLSG 133 (136)
T ss_dssp ECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--SCEEEEEEEEEE
T ss_pred eCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--CeEEEEEEEEEe
Confidence 99987 7999999999999998753 4479999975 799999999974
No 46
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.65 E-value=1.2e-15 Score=151.03 Aligned_cols=116 Identities=26% Similarity=0.347 Sum_probs=96.1
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeecccc-CCCCCccceEEEEEeeCCceeEEEEEEEeccC-
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK------IVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF- 559 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~------~~~kT~~~-~t~nP~Wne~f~f~v~~~~~~L~i~V~d~d~~- 559 (835)
+.|.|+|++|++|+.++..|.+||||++++++ ..++|+++ ++.||.|||+|.|.+......|.|+|||++..
T Consensus 8 g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~V~d~d~~~ 87 (176)
T 3m7f_B 8 RVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDENRLT 87 (176)
T ss_dssp EEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEEEEECC---
T ss_pred EEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEEEEECCCCC
Confidence 58999999999999999899999999999953 67999999 99999999999999887778999999999988
Q ss_pred CCceEEEEEEeccccccCCee------eeEEecccC-----CCceEEEEEEEeec
Q 003259 560 GDENMGSARVNLEGLVEGSVR------DIWVPLEKV-----NTGELRLQIEATRV 603 (835)
Q Consensus 560 ~d~~IG~~~i~L~~l~~~~~~------~~w~~L~~~-----~~G~I~l~l~~~~~ 603 (835)
++++||++.++|.++..+... ..||+|... ..|+|++++.|.+.
T Consensus 88 ~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 88 RDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp -CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 899999999999999876533 179999753 26999999999976
No 47
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.62 E-value=1.3e-15 Score=176.66 Aligned_cols=117 Identities=26% Similarity=0.426 Sum_probs=106.3
Q ss_pred CcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCeEeeeeeecCCCCCeeeeEEEeecC---CCcEEEEEEECCCCCCC
Q 003259 616 SGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIFKTLNPQWHQTLEFPDD---GSPLTLHVRDHNALLAS 692 (835)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~---~~~L~i~V~d~d~~~~d 692 (835)
...|.|+|+|++|++|+..|..|.+||||++.+++.+++|+++++|+||+|||+|.|.+. ...|.|+|||+|.+++|
T Consensus 384 ~~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~ 463 (510)
T 3jzy_A 384 SGIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPD 463 (510)
T ss_dssp --CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSC
T ss_pred CCCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCC
Confidence 567899999999999999999999999999999999999999999999999999999975 46799999999999999
Q ss_pred CeEEEEEEEccccCCCC----ceeeEEecCCCCCcEEEEEEEEE
Q 003259 693 SSIGDCVVEYQRLPPNQ----MADKWIPLQGVRKGEIHVLITRK 732 (835)
Q Consensus 693 ~~iG~~~i~l~~l~~~~----~~~~w~~L~~~~~G~i~l~l~~~ 732 (835)
++||++.+++.++..+. +...|++|.+..+|+|+++++++
T Consensus 464 d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 99999999999886543 37899999999999999999884
No 48
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.62 E-value=4.8e-15 Score=139.31 Aligned_cols=111 Identities=21% Similarity=0.292 Sum_probs=95.0
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEEC--CeEeecccc-CCCCCccceEEEEEeeCCceeEEEEEEEeccC-C---C
Q 003259 489 KINVTVVEGKDLMPKDKSGKCDPYVKLQYG--KIVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-G---D 561 (835)
Q Consensus 489 ~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg--~~~~kT~~~-~t~nP~Wne~f~f~v~~~~~~L~i~V~d~d~~-~---d 561 (835)
.|.|+|++|++|..++..|.+||||+++++ ++.++|+++ ++.||.|||+|.|.+.... .|.|+|||++.. + |
T Consensus 6 ~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~~~v~d~d~~~~~~~d 84 (132)
T 3pyc_A 6 KIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SITISVWNHKKIHKKQGA 84 (132)
T ss_dssp EEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEEEEEEEGGGTTSSTTT
T ss_pred EEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEEEEEEECCCCCCCCCC
Confidence 799999999999999999999999999995 488999999 9999999999999976654 499999999987 3 7
Q ss_pred ceEEEEEEeccccc-cCCeeeeEEecccC-------CCceEEEEEEE
Q 003259 562 ENMGSARVNLEGLV-EGSVRDIWVPLEKV-------NTGELRLQIEA 600 (835)
Q Consensus 562 ~~IG~~~i~L~~l~-~~~~~~~w~~L~~~-------~~G~I~l~l~~ 600 (835)
++||++.+++.++. .......|++|... ..|+|.+++++
T Consensus 85 ~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 85 GFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp TEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 99999999999883 33344578888754 26888888865
No 49
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=5.8e-15 Score=140.39 Aligned_cols=102 Identities=22% Similarity=0.424 Sum_probs=91.7
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeecccc-CCCCCccceEEEEEeeC----CceeEEEEEEEeccC-
Q 003259 489 KINVTVVEGKDLMPKDKSGKCDPYVKLQY---GKIVQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNEEIF- 559 (835)
Q Consensus 489 ~L~V~V~~a~~L~~~~~~g~~dpyv~v~l---g~~~~kT~~~-~t~nP~Wne~f~f~v~~----~~~~L~i~V~d~d~~- 559 (835)
.|.|+|++|++|+.++..|.+||||++++ +...++|+++ ++.||.|||+|.|.+.. ....|.|+|||++..
T Consensus 27 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~ 106 (141)
T 2d8k_A 27 TLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFS 106 (141)
T ss_dssp CEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCSSS
T ss_pred EEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCCCC
Confidence 79999999999999998999999999999 3568999999 99999999999998533 257899999999987
Q ss_pred CCceEEEEEEeccccccCCeeeeEEecccCC
Q 003259 560 GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (835)
Q Consensus 560 ~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (835)
++++||++.++|.++..+.....|++|.+.+
T Consensus 107 ~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 107 RNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp SCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred CCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 8999999999999998888788999998754
No 50
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.61 E-value=2.8e-15 Score=141.37 Aligned_cols=104 Identities=16% Similarity=0.213 Sum_probs=89.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeecccc-CCCCCccceEEEEE-eeC---CceeEEEEEEEec
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELD-EIG---GGECLMVKCYNEE 557 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l-----g~~~~kT~~~-~t~nP~Wne~f~f~-v~~---~~~~L~i~V~d~d 557 (835)
+.|.|+|++|++|+. +..|.+||||++++ +...++|+++ ++.||.|||+|.|. +.. ....|.|+|||++
T Consensus 20 ~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d 98 (134)
T 2b3r_A 20 GTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAE 98 (134)
T ss_dssp TEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECC
T ss_pred CEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECC
Confidence 389999999999986 67889999999999 3568999999 99999999999998 553 3578999999999
Q ss_pred cC-CCceEEEEEEeccccccCCeeeeEEecccCCCc
Q 003259 558 IF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTG 592 (835)
Q Consensus 558 ~~-~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~~G 592 (835)
.. ++++||++.++|.++..+.....||+|.+.+.|
T Consensus 99 ~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~~g 134 (134)
T 2b3r_A 99 SLRENFFLGGITLPLKDFNLSKETVKWYQLTAATYL 134 (134)
T ss_dssp SSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC----
T ss_pred CCCCCcEEEEEEEEhhhccCCCCcceeEECCCccCC
Confidence 88 789999999999999887788899999876543
No 51
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.61 E-value=3.5e-15 Score=146.88 Aligned_cols=117 Identities=15% Similarity=0.249 Sum_probs=98.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc-CCCCCccceEEEEEeeCCceeEEEEEEEeccC-CCceEE
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-GDENMG 565 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~~~~kT~~~-~t~nP~Wne~f~f~v~~~~~~L~i~V~d~d~~-~d~~IG 565 (835)
+.|.|+|++|++|+..+..+.+||||+++++++.++|+++ ++.||.|||+|.|.+. +...|.|+|||++.. ++++||
T Consensus 36 ~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v~-~~~~L~~~V~D~d~~~~dd~lG 114 (173)
T 2nq3_A 36 SQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIVT-PVSKLHFRVWSHQTLKSDVLLG 114 (173)
T ss_dssp EEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEEC-TTCEEEEEEEECCSSSCCEEEE
T ss_pred eEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEeC-CCCEEEEEEEECCCCCCCceEE
Confidence 4899999999999844444559999999998899999999 9999999999999874 588899999999988 889999
Q ss_pred EEEEeccccccCC-----eeeeEEecccC-----CCceEEEEEEEeecCC
Q 003259 566 SARVNLEGLVEGS-----VRDIWVPLEKV-----NTGELRLQIEATRVDD 605 (835)
Q Consensus 566 ~~~i~L~~l~~~~-----~~~~w~~L~~~-----~~G~I~l~l~~~~~~~ 605 (835)
++.++|.++..+. ....|++|... ..|+|.+++.|.+++.
T Consensus 115 ~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~~l~~~~ 164 (173)
T 2nq3_A 115 TAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLDGLQLES 164 (173)
T ss_dssp EEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEESEECC-
T ss_pred EEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEeeeecch
Confidence 9999999987542 12579999764 3699999999997643
No 52
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.60 E-value=4.1e-15 Score=141.34 Aligned_cols=105 Identities=24% Similarity=0.443 Sum_probs=91.6
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeecccc-CCCCCccceEEEEEeeC----CceeEEEEEEEec
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNEE 557 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l-----g~~~~kT~~~-~t~nP~Wne~f~f~v~~----~~~~L~i~V~d~d 557 (835)
+.|.|+|++|++|+.++..+.+||||++++ +...++|+++ ++.||.|||+|.|.+.. ....|.|+|||++
T Consensus 21 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 100 (141)
T 1v27_A 21 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQA 100 (141)
T ss_dssp TEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBC
T ss_pred CEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECC
Confidence 389999999999999998999999999999 3578999999 99999999999998432 2478999999999
Q ss_pred cC-C--CceEEEEEEeccccccCCeeeeEEecccCCCce
Q 003259 558 IF-G--DENMGSARVNLEGLVEGSVRDIWVPLEKVNTGE 593 (835)
Q Consensus 558 ~~-~--d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~~G~ 593 (835)
.. + +++||++.++|.++.... ...||+|.+...|.
T Consensus 101 ~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~g~ 138 (141)
T 1v27_A 101 RVREEESEFLGEILIELETALLDD-EPHWYKLQTHDSGP 138 (141)
T ss_dssp SSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSSCC
T ss_pred CCcCCCCceEEEEEEEccccCCCC-CCceEECcccccCC
Confidence 88 4 899999999999987654 77999998865553
No 53
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.60 E-value=7.4e-15 Score=141.63 Aligned_cols=102 Identities=25% Similarity=0.455 Sum_probs=91.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeecccc-CCCCCccceEEEEEeeC---CceeEEEEEEEeccC-
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY---GKIVQRTRTA-HSPNHVWNQKFELDEIG---GGECLMVKCYNEEIF- 559 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l---g~~~~kT~~~-~t~nP~Wne~f~f~v~~---~~~~L~i~V~d~d~~- 559 (835)
+.|.|+|++|++|+..+..+.+||||++++ ++..++|+++ ++.||.|||+|.|.+.. ....|.|+|||++..
T Consensus 42 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~ 121 (152)
T 1rsy_A 42 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS 121 (152)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS
T ss_pred CEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCCCC
Confidence 389999999999999998899999999999 4578999999 99999999999998654 257899999999988
Q ss_pred CCceEEEEEEeccccccCCeeeeEEecccC
Q 003259 560 GDENMGSARVNLEGLVEGSVRDIWVPLEKV 589 (835)
Q Consensus 560 ~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~ 589 (835)
++++||++.++|.++..+.....|++|.+.
T Consensus 122 ~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 151 (152)
T 1rsy_A 122 KHDIIGEFKVPMNTVDFGHVTEEWRDLQSA 151 (152)
T ss_dssp CCEEEEEEEEEGGGCCCSSCEEEEEECBCC
T ss_pred CCcEEEEEEEEchhccCCCCcceEEECCCC
Confidence 899999999999999888788899999763
No 54
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.60 E-value=5.8e-15 Score=142.51 Aligned_cols=104 Identities=24% Similarity=0.411 Sum_probs=89.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeecccc-CCCCCccceEEEEEeeC--CceeEEEEEEEeccC
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIG--GGECLMVKCYNEEIF 559 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l-----g~~~~kT~~~-~t~nP~Wne~f~f~v~~--~~~~L~i~V~d~d~~ 559 (835)
+.|.|+|++|++|+..+ .|.+||||++++ +...++|+++ ++.||.|||+|.|.+.. ....|.|+|||++..
T Consensus 27 ~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~ 105 (153)
T 3fbk_A 27 RVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQ 105 (153)
T ss_dssp SEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCCC
Confidence 38999999999999888 699999999999 2467999999 99999999999999743 345699999999987
Q ss_pred -C-CceEEEEEEecccccc-CCeeeeEEecccCCCc
Q 003259 560 -G-DENMGSARVNLEGLVE-GSVRDIWVPLEKVNTG 592 (835)
Q Consensus 560 -~-d~~IG~~~i~L~~l~~-~~~~~~w~~L~~~~~G 592 (835)
+ +++||++.++|.++.. +.....||+|.+...|
T Consensus 106 ~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~g 141 (153)
T 3fbk_A 106 SRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHLG 141 (153)
T ss_dssp GGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTGG
T ss_pred CCCCcEEEEEEEEHHHhcCCCCccccEEECCChhhc
Confidence 5 8999999999999985 5677899999876544
No 55
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.60 E-value=4.3e-15 Score=139.31 Aligned_cols=95 Identities=17% Similarity=0.296 Sum_probs=77.1
Q ss_pred cceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCeEeeeeeec-CCCCCeeeeEEEeecC--CCcEEEEEEECCCCCCCC
Q 003259 617 GNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIF-KTLNPQWHQTLEFPDD--GSPLTLHVRDHNALLASS 693 (835)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~-~t~nP~wne~f~f~v~--~~~L~i~V~d~d~~~~d~ 693 (835)
..+.|+|+|++|++++. .|.+||||++. .+..+|++++ +|+||+|||+|.|.+. ...|.|+|||+| +++|+
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd 76 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDT 76 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSCEE
T ss_pred cceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCCCC
Confidence 46899999999998853 67899999999 3344566655 6999999999999985 467999999999 89999
Q ss_pred eEEEEEEEccccCCCC--ceeeEEec
Q 003259 694 SIGDCVVEYQRLPPNQ--MADKWIPL 717 (835)
Q Consensus 694 ~iG~~~i~l~~l~~~~--~~~~w~~L 717 (835)
+||++.++|+++.... ....|.++
T Consensus 77 ~iG~~~i~l~~l~~~~~~~~~~~~~~ 102 (131)
T 2cjt_A 77 MVGTVWIPLRTIRQSNEEGPGEWLTL 102 (131)
T ss_dssp EEEEEEEEGGGSCBCSSCCCCEEEEC
T ss_pred eEEEEEEEHHHhhhcCCCCccccEEc
Confidence 9999999999985432 22356555
No 56
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.60 E-value=5.9e-15 Score=140.69 Aligned_cols=101 Identities=25% Similarity=0.438 Sum_probs=91.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEeccC-
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY---GKIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF- 559 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l---g~~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~~- 559 (835)
+.|.|+|++|++|+..+..+.+||||++++ +++.++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 34 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~~ 113 (143)
T 3f04_A 34 NQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFS 113 (143)
T ss_dssp TEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCSSS
T ss_pred CEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCCCC
Confidence 389999999999999888899999999999 5678999999 999999999999987543 47899999999988
Q ss_pred CCceEEEEEEeccccccCCeeeeEEeccc
Q 003259 560 GDENMGSARVNLEGLVEGSVRDIWVPLEK 588 (835)
Q Consensus 560 ~d~~IG~~~i~L~~l~~~~~~~~w~~L~~ 588 (835)
++++||++.++|.++..+.....|++|.+
T Consensus 114 ~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 114 KHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp CCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred CCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 89999999999999988888889999975
No 57
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.59 E-value=8.5e-15 Score=136.90 Aligned_cols=99 Identities=24% Similarity=0.443 Sum_probs=84.6
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeecccc-CCCCCccceEEEEEeeC----CceeEEEEEEEec
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIG----GGECLMVKCYNEE 557 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l-----g~~~~kT~~~-~t~nP~Wne~f~f~v~~----~~~~L~i~V~d~d 557 (835)
+.|.|+|++|++|+..+..|.+||||++++ +...++|+++ ++.||.|||+|.|.+.. ....|.|+|||++
T Consensus 18 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d 97 (129)
T 2bwq_A 18 HQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQA 97 (129)
T ss_dssp TEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC-
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECC
Confidence 389999999999999998999999999999 3578999999 99999999999998532 2578999999999
Q ss_pred cC-C--CceEEEEEEeccccccCCeeeeEEecc
Q 003259 558 IF-G--DENMGSARVNLEGLVEGSVRDIWVPLE 587 (835)
Q Consensus 558 ~~-~--d~~IG~~~i~L~~l~~~~~~~~w~~L~ 587 (835)
.. + +++||++.++|.++.... ...||+|+
T Consensus 98 ~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 98 RVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp ------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred cCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 87 4 899999999999987655 77999984
No 58
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.58 E-value=4.9e-15 Score=140.05 Aligned_cols=105 Identities=30% Similarity=0.488 Sum_probs=93.5
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeecccc-CCCCCccceEEEEEeeCC--ceeEEEEEEEeccC
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIGG--GECLMVKCYNEEIF 559 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l-----g~~~~kT~~~-~t~nP~Wne~f~f~v~~~--~~~L~i~V~d~d~~ 559 (835)
+.|.|+|++|++|+..+..|.+||||++++ +...++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 16 ~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~~ 95 (137)
T 3rdl_A 16 EKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDRT 95 (137)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCSS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCCC
Confidence 389999999999999998999999999999 4678999999 999999999999997653 45899999999988
Q ss_pred -CCceEEEEEEeccccccCCeeeeEEecccCCCce
Q 003259 560 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGE 593 (835)
Q Consensus 560 -~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~~G~ 593 (835)
++++||++.++|.++..+. ...||+|.+...|+
T Consensus 96 ~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~~~g~ 129 (137)
T 3rdl_A 96 TRNDFMGSLSFGVSELMKMP-ASGWYKLLNQEEGE 129 (137)
T ss_dssp SCCEEEEEEEEEHHHHHHSC-EEEEEECBCHHHHT
T ss_pred CCCceEEEEEEeHHHhccCc-cCceEECcCccccc
Confidence 8999999999999998766 77999998766554
No 59
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.58 E-value=7.3e-15 Score=140.96 Aligned_cols=103 Identities=17% Similarity=0.255 Sum_probs=90.5
Q ss_pred cEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC-----CeEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEec
Q 003259 488 RKINVTVVEGKDLMPKD-KSGKCDPYVKLQYG-----KIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEE 557 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~-~~g~~dpyv~v~lg-----~~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d 557 (835)
+.|.|+|++|++|+..+ ..+.+||||++++. ...++|+++ ++.||.|||+|.|.+... ...|.|+|||++
T Consensus 23 ~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d 102 (148)
T 3fdw_A 23 QSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHG 102 (148)
T ss_dssp TEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEEC
T ss_pred CEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECC
Confidence 38999999999999887 57899999999994 348999999 999999999999997653 457999999999
Q ss_pred cC-CCceEEEEEEeccccccCCeeeeEEecccCC
Q 003259 558 IF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (835)
Q Consensus 558 ~~-~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (835)
.. ++++||++.++|.++..+.....||+|.++.
T Consensus 103 ~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 136 (148)
T 3fdw_A 103 RFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKI 136 (148)
T ss_dssp GGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC-
T ss_pred CCcCCcEEEEEEEEcccccccCCccceEECcCcc
Confidence 88 8999999999999998777778999998753
No 60
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.58 E-value=3.6e-15 Score=143.27 Aligned_cols=105 Identities=30% Similarity=0.457 Sum_probs=93.5
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeEeecccc-CCCCCccceEEEEEeeCC--ceeEEEEEEEeccC-
Q 003259 489 KINVTVVEGKDLMPKDKSGKCDPYVKLQYG-----KIVQRTRTA-HSPNHVWNQKFELDEIGG--GECLMVKCYNEEIF- 559 (835)
Q Consensus 489 ~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg-----~~~~kT~~~-~t~nP~Wne~f~f~v~~~--~~~L~i~V~d~d~~- 559 (835)
.|.|+|++|++|+..+..+.+||||+++++ ...++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 32 ~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~ 111 (149)
T 1a25_A 32 VLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLTS 111 (149)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCSSS
T ss_pred EEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCCCC
Confidence 799999999999999988999999999994 468999999 999999999999997653 46899999999988
Q ss_pred CCceEEEEEEeccccccCCeeeeEEecccCCCceE
Q 003259 560 GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGEL 594 (835)
Q Consensus 560 ~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~~G~I 594 (835)
++++||++.++|.++..+ ....||+|.+...|++
T Consensus 112 ~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~~g~~ 145 (149)
T 1a25_A 112 RNDFMGSLSFGISELQKA-GVDGWFKLLSQEEGEY 145 (149)
T ss_dssp CCEEEEEEEEEHHHHTTC-CEEEEEECBCHHHHTT
T ss_pred CCCEEEEEEEEHHHhCcC-ccCCeEEccCCCCCcc
Confidence 899999999999999876 4678999988666654
No 61
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.57 E-value=7.7e-15 Score=141.74 Aligned_cols=100 Identities=17% Similarity=0.213 Sum_probs=88.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEec
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK------IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEE 557 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~------~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d 557 (835)
+.|.|+|++|++|+.++..|.+||||++++.. .++||+++ ++.||.|||+|.|.+... ...|.|+|||++
T Consensus 43 ~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d 122 (155)
T 2z0u_A 43 KQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTD 122 (155)
T ss_dssp TEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEEC
T ss_pred CEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECC
Confidence 38999999999999999999999999999943 37999999 999999999999997543 568999999999
Q ss_pred cC-CCceEEEEEEecccccc-CCeeeeEEecc
Q 003259 558 IF-GDENMGSARVNLEGLVE-GSVRDIWVPLE 587 (835)
Q Consensus 558 ~~-~d~~IG~~~i~L~~l~~-~~~~~~w~~L~ 587 (835)
.. ++++||++.++|.++.. +.....||+|.
T Consensus 123 ~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 123 RSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp TTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred CCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 88 89999999999999964 55678999985
No 62
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.57 E-value=9.7e-15 Score=135.01 Aligned_cols=110 Identities=13% Similarity=0.168 Sum_probs=97.0
Q ss_pred ceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCeEeeeeeec-CCCCCeeeeEEEeecC-----CCcEEEEEEECCCCCC
Q 003259 618 NGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIF-KTLNPQWHQTLEFPDD-----GSPLTLHVRDHNALLA 691 (835)
Q Consensus 618 ~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~-~t~nP~wne~f~f~v~-----~~~L~i~V~d~d~~~~ 691 (835)
.-.|+|.|.+|.+|+ |.+|||+++.+.+.+++|++++ .+.||+|||.|.|++. +..|.+.|+|++++++
T Consensus 20 ~msL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~ 94 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFS 94 (144)
T ss_dssp CEEEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSC
T ss_pred cEEEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccC
Confidence 457999999999998 5899999999999999999998 5999999999999963 6889999999999999
Q ss_pred CCeEEEEEEEccccCCCCceeeEEecCCCC----CcEEEEEEEEE
Q 003259 692 SSSIGDCVVEYQRLPPNQMADKWIPLQGVR----KGEIHVLITRK 732 (835)
Q Consensus 692 d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~----~G~i~l~l~~~ 732 (835)
+++||++.++|.++..+.....+-+|.+.+ .++|.++++|.
T Consensus 95 nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~ 139 (144)
T 3l9b_A 95 NKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQ 139 (144)
T ss_dssp CEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred CCEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEec
Confidence 999999999999997766666777775432 48999999994
No 63
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.57 E-value=2e-14 Score=136.86 Aligned_cols=101 Identities=29% Similarity=0.489 Sum_probs=90.2
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeecccc-CCCCCccceEEEEE-eeCC---ceeEEEEEEEec
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK-----IVQRTRTA-HSPNHVWNQKFELD-EIGG---GECLMVKCYNEE 557 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~-----~~~kT~~~-~t~nP~Wne~f~f~-v~~~---~~~L~i~V~d~d 557 (835)
+.|.|+|++|++|+..+..|.+||||+++++. ..++|+++ ++.||.|||+|.|. +... ...|.|+|||++
T Consensus 29 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 108 (142)
T 2chd_A 29 SNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDED 108 (142)
T ss_dssp TEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEEC
T ss_pred CEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECC
Confidence 38999999999999999899999999999943 78999999 99999999999998 4332 368999999999
Q ss_pred cC-CCceEEEEEEeccccccCCeeeeEEeccc
Q 003259 558 IF-GDENMGSARVNLEGLVEGSVRDIWVPLEK 588 (835)
Q Consensus 558 ~~-~d~~IG~~~i~L~~l~~~~~~~~w~~L~~ 588 (835)
.. ++++||++.++|.++..+.....|++|+.
T Consensus 109 ~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 109 KFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp TTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred CCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 88 78999999999999998888888998875
No 64
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.55 E-value=2.7e-14 Score=163.78 Aligned_cols=109 Identities=24% Similarity=0.444 Sum_probs=98.0
Q ss_pred CcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCeEeeeeeecCCCCCeeeeEEEeec----CCCcEEEEEEECCCCCC
Q 003259 616 SGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIFKTLNPQWHQTLEFPD----DGSPLTLHVRDHNALLA 691 (835)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v----~~~~L~i~V~d~d~~~~ 691 (835)
...+.|+|+|++|++|+. |..|.+||||+|.++++++||+++++|+||+|||+|.|.+ ....|.|+|||+|.+++
T Consensus 391 ~~~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~ 469 (540)
T 3nsj_A 391 RGLAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWD 469 (540)
T ss_dssp TTEEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSC
T ss_pred CcccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCC
Confidence 457899999999999998 9999999999999999999999999999999999999984 36789999999999999
Q ss_pred CCeEEEEEEEccccCCCCceeeEEecCCCCCcEEEEEEEEE
Q 003259 692 SSSIGDCVVEYQRLPPNQMADKWIPLQGVRKGEIHVLITRK 732 (835)
Q Consensus 692 d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~~G~i~l~l~~~ 732 (835)
|++||++.++|. .+ ....|++|+ .|+|++++++.
T Consensus 470 dD~LG~~~~~L~---~g-~~~~~~~l~---~G~l~~~~~~~ 503 (540)
T 3nsj_A 470 DDLLGSCDRSPH---SG-FHEVTCELN---HGRVKFSYHAK 503 (540)
T ss_dssp CEEEEEEEECCC---SE-EEEEEEECS---SSEEEEEEEEE
T ss_pred CCEEEEEEEEee---CC-cEEEEEEcC---CeEEEEEEEEE
Confidence 999999999987 23 467899876 59999998874
No 65
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.55 E-value=7.6e-15 Score=139.71 Aligned_cols=102 Identities=23% Similarity=0.418 Sum_probs=90.2
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECC--------------eEeecccc-CCCCCccceEEEEE-eeC---CceeE
Q 003259 489 KINVTVVEGKDLMPKDKSGKCDPYVKLQYGK--------------IVQRTRTA-HSPNHVWNQKFELD-EIG---GGECL 549 (835)
Q Consensus 489 ~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~--------------~~~kT~~~-~t~nP~Wne~f~f~-v~~---~~~~L 549 (835)
.|.|+|++|++|+.++..|.+||||+++++. ..++|+++ ++.||.|||+|.|. +.. ....|
T Consensus 19 ~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l 98 (142)
T 1rh8_A 19 NLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTL 98 (142)
T ss_dssp EEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEE
T ss_pred EEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEE
Confidence 7999999999999999899999999999954 25899999 99999999999997 432 36789
Q ss_pred EEEEEEeccC-CCceEEEEEEeccccccCCeeeeEEecccCC
Q 003259 550 MVKCYNEEIF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (835)
Q Consensus 550 ~i~V~d~d~~-~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (835)
.|+|||++.. ++++||++.++|.++..+.....||+|.+..
T Consensus 99 ~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 99 EVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp EEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred EEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 9999999988 7899999999999998777778999998754
No 66
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.54 E-value=4.9e-14 Score=133.52 Aligned_cols=100 Identities=19% Similarity=0.275 Sum_probs=86.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---C-eEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEeccC
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG---K-IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF 559 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg---~-~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~~ 559 (835)
+.|.|+|++|++ ++..|.+||||++++. + ..++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 26 ~~L~V~v~~a~~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~~ 102 (138)
T 1wfm_A 26 AELFVTRLEAVT---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRF 102 (138)
T ss_dssp TEEEEEEEEEEC---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCSS
T ss_pred CEEEEEEEEEEc---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCCC
Confidence 389999999994 5778999999999992 2 46899999 999999999999997653 56899999999988
Q ss_pred -CCceEEEEEEeccccccCCeeeeEEecccCC
Q 003259 560 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (835)
Q Consensus 560 -~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (835)
++++||++.++|.++..+.....|++|.+..
T Consensus 103 ~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 134 (138)
T 1wfm_A 103 SRHSVAGELRLGLDGTSVPLGAAQWGELKTSG 134 (138)
T ss_dssp CTTSCSEEEEEESSSSSSCTTCCEEEECCCCS
T ss_pred CCCcEEEEEEEEcccccCcccccceeeCcCCC
Confidence 8999999999999997666778999998753
No 67
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.54 E-value=7.4e-14 Score=132.02 Aligned_cols=88 Identities=19% Similarity=0.348 Sum_probs=78.6
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEecc
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK-----IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEI 558 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~-----~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~ 558 (835)
+.|.|+|++|++|+..+..|.+||||+++++. ..++|+++ ++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 16 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~ 95 (138)
T 3n5a_A 16 NSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK 95 (138)
T ss_dssp TEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCS
T ss_pred CeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCC
Confidence 38999999999999999889999999999942 58899999 999999999999997654 3689999999998
Q ss_pred C-CCceEEEEEEeccccc
Q 003259 559 F-GDENMGSARVNLEGLV 575 (835)
Q Consensus 559 ~-~d~~IG~~~i~L~~l~ 575 (835)
. ++++||++.+++.++.
T Consensus 96 ~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 96 LSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp SSCCEEEEEEEESSSSCH
T ss_pred CCCCcEEEEEEEccccCC
Confidence 8 8999999999999743
No 68
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.54 E-value=3.5e-14 Score=138.68 Aligned_cols=85 Identities=15% Similarity=0.218 Sum_probs=73.5
Q ss_pred cceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCeEeeeeeec-CCCCCeeeeEEEeecC--CCcEEEEEEECCCCCCCC
Q 003259 617 GNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLKKRTKVIF-KTLNPQWHQTLEFPDD--GSPLTLHVRDHNALLASS 693 (835)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~~kT~v~~-~t~nP~wne~f~f~v~--~~~L~i~V~d~d~~~~d~ 693 (835)
..+.|+|+|++|++++ ..|.+||||++. .+..+|++++ +++||+|||+|.|.+. ...|.|+|||+| +++|+
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd 85 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDT 85 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCE
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCc
Confidence 4689999999999884 367899999999 3445677765 6999999999999986 467999999999 88999
Q ss_pred eEEEEEEEccccCC
Q 003259 694 SIGDCVVEYQRLPP 707 (835)
Q Consensus 694 ~iG~~~i~l~~l~~ 707 (835)
+||++.|+|.++..
T Consensus 86 ~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 86 MVGTVWIPLRTIRQ 99 (167)
T ss_dssp EEEEEEEEGGGSCB
T ss_pred eEEEEEEEHHHhcc
Confidence 99999999999854
No 69
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.54 E-value=1.2e-13 Score=130.76 Aligned_cols=102 Identities=18% Similarity=0.208 Sum_probs=88.0
Q ss_pred cEEEEEEEEeecCCCCCCC-CCCCcEEEEEEC---CeEeecccc-CCCCCccceEEEEE-eeC---CceeEEEEEEEecc
Q 003259 488 RKINVTVVEGKDLMPKDKS-GKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELD-EIG---GGECLMVKCYNEEI 558 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~-g~~dpyv~v~lg---~~~~kT~~~-~t~nP~Wne~f~f~-v~~---~~~~L~i~V~d~d~ 558 (835)
+.|.|+|++|++|+.++.. +.+||||++++. ++.++|+++ ++.||.|||+|.|. +.. ....|.|+|||++.
T Consensus 22 ~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~ 101 (138)
T 1ugk_A 22 KAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR 101 (138)
T ss_dssp TEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS
T ss_pred CEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC
Confidence 3899999999999998875 899999999993 479999999 99999999999996 443 24689999999998
Q ss_pred C-CCceEEEEEEeccccccCC-eeeeEEecccC
Q 003259 559 F-GDENMGSARVNLEGLVEGS-VRDIWVPLEKV 589 (835)
Q Consensus 559 ~-~d~~IG~~~i~L~~l~~~~-~~~~w~~L~~~ 589 (835)
. ++++||++.++|.++..+. ....|++|.+.
T Consensus 102 ~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 102 FSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp SCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred CCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 8 8899999999999998765 34567888764
No 70
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.53 E-value=2.3e-14 Score=141.00 Aligned_cols=102 Identities=25% Similarity=0.314 Sum_probs=90.4
Q ss_pred EEEEEEEEeecCCCCCC-CCCCCcEEEEEEC--C---eEeecccc-CCCCCccceEEEEEeeCCceeEEEEEE-EeccC-
Q 003259 489 KINVTVVEGKDLMPKDK-SGKCDPYVKLQYG--K---IVQRTRTA-HSPNHVWNQKFELDEIGGGECLMVKCY-NEEIF- 559 (835)
Q Consensus 489 ~L~V~V~~a~~L~~~~~-~g~~dpyv~v~lg--~---~~~kT~~~-~t~nP~Wne~f~f~v~~~~~~L~i~V~-d~d~~- 559 (835)
.|.|+|++|++|+.++. .|.+||||++++. + ..++|+++ ++.||.|||+|.|.+......|.|+|| |++..
T Consensus 31 ~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L~~~V~~d~d~~~ 110 (171)
T 2q3x_A 31 QLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVLQVIVWGDYGRMD 110 (171)
T ss_dssp EEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEEEEEEEEECSTTC
T ss_pred EEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEEEEEEEEcCCCCC
Confidence 89999999999998885 6999999999993 2 38899999 999999999999998666889999999 98887
Q ss_pred CCceEEEEEEeccccccCCeeeeEEecccCC
Q 003259 560 GDENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (835)
Q Consensus 560 ~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (835)
++++||++.++|.++..+.....||+|.+..
T Consensus 111 ~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 111 HKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp SSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred CCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 7899999999999998777788999998753
No 71
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=5.1e-14 Score=134.02 Aligned_cols=102 Identities=23% Similarity=0.282 Sum_probs=88.5
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEecc
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG-----KIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEI 558 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg-----~~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~ 558 (835)
+.|.|+|++|++|+.++..| +||||++++. ...++|+++ ++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 24 ~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 102 (142)
T 2dmg_A 24 NKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGG 102 (142)
T ss_dssp TEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCC
T ss_pred CEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCC
Confidence 38999999999999999888 9999999992 268899999 999999999999986542 4589999999997
Q ss_pred C-C--CceEEEEEEeccccccCCeeeeEEecccCC
Q 003259 559 F-G--DENMGSARVNLEGLVEGSVRDIWVPLEKVN 590 (835)
Q Consensus 559 ~-~--d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~ 590 (835)
. + +++||++.++|.++..+.....|++|.+.+
T Consensus 103 ~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 103 FLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp SSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred ccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 6 3 469999999999998777778999998743
No 72
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.53 E-value=3.8e-14 Score=135.76 Aligned_cols=102 Identities=20% Similarity=0.281 Sum_probs=87.7
Q ss_pred cEEEEEEEEeecCCCC-CC------CCCCCcEEEEEEC---CeEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEE
Q 003259 488 RKINVTVVEGKDLMPK-DK------SGKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKC 553 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~-~~------~g~~dpyv~v~lg---~~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V 553 (835)
+.|.|+|++|++|+.. +. .+.+||||++++. +..++|+++ ++.||.|||+|.|.+... ...|.|+|
T Consensus 26 ~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V 105 (147)
T 2enp_A 26 NHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTV 105 (147)
T ss_dssp TEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEE
T ss_pred CEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEE
Confidence 3899999999999874 33 3589999999994 468899999 999999999999986542 45899999
Q ss_pred EEeccC-CCceEEEEEEeccccccCCeeeeEEecccC
Q 003259 554 YNEEIF-GDENMGSARVNLEGLVEGSVRDIWVPLEKV 589 (835)
Q Consensus 554 ~d~d~~-~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~ 589 (835)
||++.. ++++||++.++|.++........|++|.+.
T Consensus 106 ~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 142 (147)
T 2enp_A 106 VDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIPS 142 (147)
T ss_dssp ECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBCC
T ss_pred EECCCCcCCcEEEEEEEechhcCCCCCccEEEEeecC
Confidence 999988 789999999999999877666789999864
No 73
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.52 E-value=9.6e-14 Score=134.83 Aligned_cols=104 Identities=20% Similarity=0.316 Sum_probs=88.2
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEecc
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYG--K---IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEI 558 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg--~---~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~ 558 (835)
+.|.|+|++|++|+..+..|.+||||+++++ + ..++|+++ ++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 25 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~ 104 (159)
T 1tjx_A 25 GKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK 104 (159)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS
T ss_pred CEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCC
Confidence 3899999999999999988999999999993 2 57899999 999999999999997653 4679999999998
Q ss_pred C-CCceEEEEEEecccc----------cc--CCeeeeEEecccCCC
Q 003259 559 F-GDENMGSARVNLEGL----------VE--GSVRDIWVPLEKVNT 591 (835)
Q Consensus 559 ~-~d~~IG~~~i~L~~l----------~~--~~~~~~w~~L~~~~~ 591 (835)
. ++++||++.+++..+ .. +.....|++|.+...
T Consensus 105 ~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~~~ 150 (159)
T 1tjx_A 105 IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVEEE 150 (159)
T ss_dssp SSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCHHH
T ss_pred CCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCccc
Confidence 8 799999999999853 22 235678999976543
No 74
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.49 E-value=3.3e-13 Score=132.04 Aligned_cols=100 Identities=20% Similarity=0.297 Sum_probs=85.0
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEecc
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK-----IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEI 558 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~-----~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~ 558 (835)
+.|.|+|++|++|+..+..|.+||||+++++. ..++|+++ ++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 37 ~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~ 116 (166)
T 2cm5_A 37 GGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI 116 (166)
T ss_dssp TEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS
T ss_pred CEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCC
Confidence 38999999999999999899999999999943 68999999 999999999999997653 5689999999998
Q ss_pred C-CCceEEEEEEeccccccCCeeeeEEecccC
Q 003259 559 F-GDENMGSARVNLEGLVEGSVRDIWVPLEKV 589 (835)
Q Consensus 559 ~-~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~ 589 (835)
. ++++||++.+++.++.. ....|++|...
T Consensus 117 ~~~~~~iG~~~i~l~~~~~--~~~~W~~l~~~ 146 (166)
T 2cm5_A 117 GKSNDYIGGCQLGISAKGE--RLKHWYECLKN 146 (166)
T ss_dssp SSCCEEEEEEEEETTCCHH--HHHHHHHHHHC
T ss_pred CCCCcEEEeEEEecccCCc--hhHHHHHHHhC
Confidence 8 78999999999998632 23456655443
No 75
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.48 E-value=4.3e-13 Score=129.31 Aligned_cols=99 Identities=26% Similarity=0.371 Sum_probs=77.9
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---Eeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEecc
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY--GKI---VQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEI 558 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l--g~~---~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~ 558 (835)
+.|.|+|++|++|+..+..|.+||||++++ ++. .++|+++ ++.||.|||+|.|.+... ...|.|+|||++.
T Consensus 30 ~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~ 109 (153)
T 1w15_A 30 NTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER 109 (153)
T ss_dssp TEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT
T ss_pred CEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC
Confidence 389999999999999988899999999999 433 7899999 999999999999997654 4789999999998
Q ss_pred C-CCceEEEEEEeccccccCCeeeeEEeccc
Q 003259 559 F-GDENMGSARVNLEGLVEGSVRDIWVPLEK 588 (835)
Q Consensus 559 ~-~d~~IG~~~i~L~~l~~~~~~~~w~~L~~ 588 (835)
. ++++||++.+++.+ .+.....|++|..
T Consensus 110 ~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~ 138 (153)
T 1w15_A 110 GSRNEVIGRLVLGATA--EGSGGGHWKEICD 138 (153)
T ss_dssp TSCCEEEEEEEESTTC--CSHHHHHHHHHHH
T ss_pred CCCCcEEEEEEECCCC--CchHHHHHHHHHh
Confidence 7 89999999999988 2223345555544
No 76
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.46 E-value=9.9e-14 Score=163.73 Aligned_cols=104 Identities=22% Similarity=0.385 Sum_probs=96.3
Q ss_pred CcceEEEEEEEEeecCCc---CCcCCCCCCEEEEEECC---eEeeeeeecCCCCCeeeeEEEeecC---CCcEEEEEEEC
Q 003259 616 SGNGWIELVIVEARDLVA---ADLRGTSDPYVKVQYGD---LKKRTKVIFKTLNPQWHQTLEFPDD---GSPLTLHVRDH 686 (835)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~---~d~~g~~DPyv~v~~~~---~~~kT~v~~~t~nP~wne~f~f~v~---~~~L~i~V~d~ 686 (835)
.+.+.|+|+|++|++|+. +|..|.+||||++++++ .++||+++++|+||+|||+|.|.+. ...|.|+|||+
T Consensus 15 ~~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~ 94 (749)
T 1cjy_A 15 QYSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDA 94 (749)
T ss_dssp CCCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEEC
T ss_pred CCccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEEC
Confidence 567999999999999998 88889999999999974 6889999999999999999999985 47899999999
Q ss_pred CCCCCCCeEEEEEEEccccCCCCceeeEEecCCC
Q 003259 687 NALLASSSIGDCVVEYQRLPPNQMADKWIPLQGV 720 (835)
Q Consensus 687 d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~ 720 (835)
|.++ |++||++.+++.++..+.....|++|++.
T Consensus 95 D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 95 NYVM-DETLGTATFTVSSMKVGEKKEVPFIFNQV 127 (749)
T ss_dssp CSSS-CEEEEEECCBSTTSCTTCCCCEEEEETTT
T ss_pred CCCC-CceeEEEEEEHHHcCCCCceEEEEecCCC
Confidence 9999 99999999999999888888999999864
No 77
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.43 E-value=2.6e-13 Score=127.15 Aligned_cols=88 Identities=14% Similarity=0.219 Sum_probs=73.4
Q ss_pred cccEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCcCeEEEEEecceeeeeccC-CCCCCcccceeEEEE
Q 003259 293 VGGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIELEELTRRTDAR-PGSDPRWDSMFNMVL 371 (835)
Q Consensus 293 ~~GvL~V~V~~A~~L~~~~~~g~~~~~~~~~~~dpy~~~~~~~~~~dpyv~v~~g~~~~t~~i~-~~~nP~W~etf~~~v 371 (835)
+.|.|.|+|++|+++.. .|. +||||+|+ +...+|++++ ++.||+|||+|.|.+
T Consensus 3 ~~~~L~V~V~~A~~l~~---~g~----------------------~DPYv~v~-~~~~kt~~~~~~t~nP~WnE~f~f~v 56 (131)
T 2cjt_A 3 VMSLLCVGVKKAKFDGA---QEK----------------------FNTYVTLK-VQNVKSTTIAVRGSQPSWEQDFMFEI 56 (131)
T ss_dssp CCEEEEEEEEEEECSSC---GGG----------------------CEEEEEEE-ETTEEEECCCEESSSCEEEEEEEEEE
T ss_pred cceEEEEEEEEeECCCC---CCC----------------------cCeEEEEE-ecCEEEeEecCCCCCceECCEEEEEE
Confidence 56999999999998852 333 39999999 5445666655 799999999999999
Q ss_pred EcCCceEEEEEEEeCCCCCCcceeEEEEEecccccCC
Q 003259 372 HEETGTVRFNLYECIPGHVKYDYLTSCEVKMKYVADD 408 (835)
Q Consensus 372 ~~~~~~L~~~v~d~~~~~~kdd~LG~~~i~L~~L~~~ 408 (835)
.+....|.|+|||.| ..+|++||++.++|+++...
T Consensus 57 ~~~~~~L~~~V~D~d--~~~dd~iG~~~i~l~~l~~~ 91 (131)
T 2cjt_A 57 NRLDLGLTVEVWNKG--LIWDTMVGTVWIPLRTIRQS 91 (131)
T ss_dssp CCCSSEEEEEEEECC--SSCEEEEEEEEEEGGGSCBC
T ss_pred eCCCCeEEEEEEECC--CCCCCeEEEEEEEHHHhhhc
Confidence 887778999999998 46899999999999998753
No 78
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.42 E-value=8.3e-13 Score=154.86 Aligned_cols=113 Identities=19% Similarity=0.304 Sum_probs=96.9
Q ss_pred CcceEEEEEEEEeecCCcCCc--CCCCCCEEEEEECC-----eEeeeeeecCC-CCCeeeeEEEeecCC---CcEEEEEE
Q 003259 616 SGNGWIELVIVEARDLVAADL--RGTSDPYVKVQYGD-----LKKRTKVIFKT-LNPQWHQTLEFPDDG---SPLTLHVR 684 (835)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~d~--~g~~DPyv~v~~~~-----~~~kT~v~~~t-~nP~wne~f~f~v~~---~~L~i~V~ 684 (835)
...+.|+|+|++|++|+..+. .|.+||||+|.+.+ .++||++++++ +||+|||+|.|.+.. ..|.|+||
T Consensus 494 ~~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~ 573 (624)
T 1djx_A 494 WRPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVE 573 (624)
T ss_dssp CCCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEE
T ss_pred ccceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEE
Confidence 467999999999999998874 78999999999943 68899999997 999999999999862 57999999
Q ss_pred ECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCCC-----CcEEEEEEEE
Q 003259 685 DHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR-----KGEIHVLITR 731 (835)
Q Consensus 685 d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~l~~ 731 (835)
|+|.+++|++||++.++|..+..+. +|++|.+.. .|.|.+.+++
T Consensus 574 D~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~~~~~L~v~i~~ 622 (624)
T 1djx_A 574 DYDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQHPSATLFVKISI 622 (624)
T ss_dssp ECCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEEEEEEEEEEEEE
T ss_pred EcCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCCCceEEEEEEEE
Confidence 9999999999999999999997653 688985432 3677777776
No 79
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.42 E-value=8e-13 Score=153.12 Aligned_cols=115 Identities=21% Similarity=0.346 Sum_probs=103.7
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc-CCCCCccceEEEEEeeCC-ceeEEEEEEEeccC-CCce
Q 003259 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIGG-GECLMVKCYNEEIF-GDEN 563 (835)
Q Consensus 487 g~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~~~~kT~~~-~t~nP~Wne~f~f~v~~~-~~~L~i~V~d~d~~-~d~~ 563 (835)
.+.|.|+|++|++|+.++..|.+||||++++++..++|+++ ++.||.|||+|.|.+... ...|.|+|||+|.. ++++
T Consensus 386 ~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~~~~d~ 465 (510)
T 3jzy_A 386 IGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDDF 465 (510)
T ss_dssp CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSSSSCCE
T ss_pred CceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCCCCCCc
Confidence 35899999999999999999999999999999999999999 999999999999998665 57899999999988 7999
Q ss_pred EEEEEEeccccccCCe----eeeEEecccCCCceEEEEEEEe
Q 003259 564 MGSARVNLEGLVEGSV----RDIWVPLEKVNTGELRLQIEAT 601 (835)
Q Consensus 564 IG~~~i~L~~l~~~~~----~~~w~~L~~~~~G~I~l~l~~~ 601 (835)
||++.+++.++..+.. ...|++|.+..+|+|.+++...
T Consensus 466 lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~G~i~l~~~l~ 507 (510)
T 3jzy_A 466 LGRTEIPVAKIRTEQESKGPMTRRLLLHEVPTGEVWVRFDLQ 507 (510)
T ss_dssp EEEEEEEHHHHHHHHHHHCSCCEEEECBSSSSCEEEEEEEEE
T ss_pred eEEEEEEHHHhccccCCCCceeeeecCCCCCCceEEEEEEEE
Confidence 9999999999986543 6789999988899999988754
No 80
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.40 E-value=2.1e-12 Score=119.41 Aligned_cols=111 Identities=17% Similarity=0.240 Sum_probs=97.2
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc--CCCCCccceEEEEEeeCC---ceeEEEEEEEeccC-CCc
Q 003259 489 KINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA--HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF-GDE 562 (835)
Q Consensus 489 ~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~~~~kT~~~--~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~~-~d~ 562 (835)
.|+|+|.+|.+|+ |.+|||+++.+.+.+++|+++ ++.||.|||.|+|.+..+ ...|.|.|+|++.. ++.
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~v~~nr 96 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSKVFSNK 96 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECTTSCCE
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECccccCCC
Confidence 6999999999997 579999999999999999999 499999999999997653 78999999999988 999
Q ss_pred eEEEEEEeccccccCCeeeeEEecccCC----CceEEEEEEEeecC
Q 003259 563 NMGSARVNLEGLVEGSVRDIWVPLEKVN----TGELRLQIEATRVD 604 (835)
Q Consensus 563 ~IG~~~i~L~~l~~~~~~~~w~~L~~~~----~G~I~l~l~~~~~~ 604 (835)
+||++.++|+++........+-+|.+.+ .++|.++++|.+.+
T Consensus 97 lIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 97 LIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp EEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEETT
T ss_pred EEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCCC
Confidence 9999999999999877655666665533 48999999999643
No 81
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.37 E-value=3.8e-12 Score=145.98 Aligned_cols=106 Identities=20% Similarity=0.364 Sum_probs=93.4
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc-CCCCCccceEEEEEeeC--CceeEEEEEEEeccC-CCce
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA-HSPNHVWNQKFELDEIG--GGECLMVKCYNEEIF-GDEN 563 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~~~~kT~~~-~t~nP~Wne~f~f~v~~--~~~~L~i~V~d~d~~-~d~~ 563 (835)
+.|.|+|++|++|+. |..|.+||||+|+++++.++|+++ ++.||.|||+|.|.+.. ....|.|+|||+|.. +|++
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~~~~dD~ 472 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADYGWDDDL 472 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCSSSCCEE
T ss_pred cEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCCCCCCCE
Confidence 589999999999988 889999999999999889999999 99999999999998643 577899999999988 7899
Q ss_pred EEEEEEeccccccCCeeeeEEecccCCCceEEEEEEEe
Q 003259 564 MGSARVNLEGLVEGSVRDIWVPLEKVNTGELRLQIEAT 601 (835)
Q Consensus 564 IG~~~i~L~~l~~~~~~~~w~~L~~~~~G~I~l~l~~~ 601 (835)
||++.++|.. .....|++|+ .|+|+++++..
T Consensus 473 LG~~~~~L~~----g~~~~~~~l~---~G~l~~~~~~~ 503 (540)
T 3nsj_A 473 LGSCDRSPHS----GFHEVTCELN---HGRVKFSYHAK 503 (540)
T ss_dssp EEEEEECCCS----EEEEEEEECS---SSEEEEEEEEE
T ss_pred EEEEEEEeeC----CcEEEEEEcC---CeEEEEEEEEE
Confidence 9999999872 3456899876 48999887654
No 82
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.35 E-value=3.7e-12 Score=124.29 Aligned_cols=85 Identities=20% Similarity=0.226 Sum_probs=72.4
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeecccc--CCCCCccceEEEEEeeCCceeEEEEEEEeccC-CCceE
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIVQRTRTA--HSPNHVWNQKFELDEIGGGECLMVKCYNEEIF-GDENM 564 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~~~~kT~~~--~t~nP~Wne~f~f~v~~~~~~L~i~V~d~d~~-~d~~I 564 (835)
+.|.|+|++|+++. ..|.+||||+++ + +.++|+++ ++.||.|||+|.|.+......|.|+|||++ . +|++|
T Consensus 14 ~~L~V~V~~A~~l~---~~g~~DPYV~v~-~-~~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~dd~i 87 (167)
T 2cjs_A 14 SLLCVGVKKAKFDG---AQEKFNTYVTLK-V-QNVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIWDTMV 87 (167)
T ss_dssp CEEEEEEEEEECSS---CGGGCEEEEEEE-E-TTEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSCCEEE
T ss_pred EEEEEEEEEEECCC---CCCCCCeEEEEE-e-cceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCCCceE
Confidence 48999999999884 268899999999 3 33556665 799999999999998877778999999999 6 89999
Q ss_pred EEEEEeccccccCC
Q 003259 565 GSARVNLEGLVEGS 578 (835)
Q Consensus 565 G~~~i~L~~l~~~~ 578 (835)
|++.++|.++....
T Consensus 88 G~~~i~L~~l~~~~ 101 (167)
T 2cjs_A 88 GTVWIPLRTIRQSN 101 (167)
T ss_dssp EEEEEEGGGSCBCS
T ss_pred EEEEEEHHHhcccC
Confidence 99999999986543
No 83
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.31 E-value=1.9e-13 Score=156.29 Aligned_cols=97 Identities=22% Similarity=0.353 Sum_probs=14.9
Q ss_pred cceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCe-EeeeeeecCC---CCCeeeeEEEeecC--CCcEEEEEEEC-C--
Q 003259 617 GNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDL-KKRTKVIFKT---LNPQWHQTLEFPDD--GSPLTLHVRDH-N-- 687 (835)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~-~~kT~v~~~t---~nP~wne~f~f~v~--~~~L~i~V~d~-d-- 687 (835)
..+.|+|+|++|++|+++| ||||++++++. ..||+++++| +||+|||+|.|.+. ...|.++|||+ |
T Consensus 9 ~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKK 83 (483)
T ss_dssp EEECC--------------------------------------------------CCEECC-------------------
T ss_pred eccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCcc
Confidence 3578999999999999876 99999999875 6799999999 99999999999853 47899999995 4
Q ss_pred -CCCCCCeEEEEEEEccccCCCCceeeEEecC
Q 003259 688 -ALLASSSIGDCVVEYQRLPPNQMADKWIPLQ 718 (835)
Q Consensus 688 -~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~ 718 (835)
..++|++||++.|++.++..+...++||+|.
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~ 115 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRHFTEQWYPVT 115 (483)
T ss_dssp -----------------------CCEECC---
T ss_pred ccCCCCceEEEEEEEHHHhcCCCCCCeEEECC
Confidence 3688999999999999998888889999994
No 84
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.23 E-value=1.5e-11 Score=146.96 Aligned_cols=112 Identities=28% Similarity=0.502 Sum_probs=98.3
Q ss_pred CceEEEEEEEeecCCCCCCCCCCCCCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEE-----CCeEeeeeeecCCCCCe
Q 003259 591 TGELRLQIEATRVDDNEGSRGQNIGSGNGWIELVIVEARDLVAADLRGTSDPYVKVQY-----GDLKKRTKVIFKTLNPQ 665 (835)
Q Consensus 591 ~G~I~l~l~~~~~~~~~~~~~~~~~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~-----~~~~~kT~v~~~t~nP~ 665 (835)
.|+|.+++.+. .+.|.|++.+|++|+.+|..|.+||||++.+ ...+.+|+++++|+||+
T Consensus 160 ~g~i~~~~~~~----------------~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~ 223 (674)
T 3pfq_A 160 RGRIYIQAHID----------------REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPE 223 (674)
T ss_dssp SCEEEEEEEEC----------------SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCE
T ss_pred cccccccceec----------------cceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCC
Confidence 57887777653 3789999999999999999999999999999 34678999999999999
Q ss_pred eeeEEEeecC----CCcEEEEEEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCC
Q 003259 666 WHQTLEFPDD----GSPLTLHVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQG 719 (835)
Q Consensus 666 wne~f~f~v~----~~~L~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~ 719 (835)
|||+|.|.+. ...|.++|||+|.+++|++||++.++++++.... .+.|+.|.+
T Consensus 224 wne~f~f~~~~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 224 WNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp EEEEEEEECCSTTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEECBC
T ss_pred ccceeeeecccCCccceeeeEEeecccccccccccccccchhhhccCC-cccceeecc
Confidence 9999999975 3569999999999999999999999999986554 589999854
No 85
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.18 E-value=3.4e-11 Score=142.20 Aligned_cols=103 Identities=24% Similarity=0.364 Sum_probs=92.9
Q ss_pred CcEEEEEEEEeecCCC---CCCCCCCCcEEEEEEC---CeEeecccc-CCCCCccceEEEEEeeC-CceeEEEEEEEecc
Q 003259 487 GRKINVTVVEGKDLMP---KDKSGKCDPYVKLQYG---KIVQRTRTA-HSPNHVWNQKFELDEIG-GGECLMVKCYNEEI 558 (835)
Q Consensus 487 g~~L~V~V~~a~~L~~---~~~~g~~dpyv~v~lg---~~~~kT~~~-~t~nP~Wne~f~f~v~~-~~~~L~i~V~d~d~ 558 (835)
.+.|.|+|++|++|+. ++..|.+||||+++++ ..+++|+++ ++.||+|||+|.|.+.. ....|.|+|||+|.
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D~ 96 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 96 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECCS
T ss_pred ccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECCC
Confidence 4589999999999988 7778899999999996 478999999 99999999999999877 46789999999998
Q ss_pred CCCceEEEEEEeccccccCCeeeeEEecccC
Q 003259 559 FGDENMGSARVNLEGLVEGSVRDIWVPLEKV 589 (835)
Q Consensus 559 ~~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~ 589 (835)
.++++||++.++|.++..+.....|++|.+.
T Consensus 97 ~~ddfIG~v~I~L~~L~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 97 VMDETLGTATFTVSSMKVGEKKEVPFIFNQV 127 (749)
T ss_dssp SSCEEEEEECCBSTTSCTTCCCCEEEEETTT
T ss_pred CCCceeEEEEEEHHHcCCCCceEEEEecCCC
Confidence 7789999999999999888778899999864
No 86
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.15 E-value=1.9e-10 Score=134.88 Aligned_cols=112 Identities=19% Similarity=0.274 Sum_probs=93.0
Q ss_pred CcEEEEEEEEeecCCCCCC--CCCCCcEEEEEE-C----CeEeecccc-CC-CCCccceEEEEEeeCC-ceeEEEEEEEe
Q 003259 487 GRKINVTVVEGKDLMPKDK--SGKCDPYVKLQY-G----KIVQRTRTA-HS-PNHVWNQKFELDEIGG-GECLMVKCYNE 556 (835)
Q Consensus 487 g~~L~V~V~~a~~L~~~~~--~g~~dpyv~v~l-g----~~~~kT~~~-~t-~nP~Wne~f~f~v~~~-~~~L~i~V~d~ 556 (835)
.+.|.|+|++|++|+..+. .+.+||||+|.+ | ...++|+++ ++ .||.|||+|+|.+..+ ...|+|.|||+
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~ 575 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDY 575 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEEC
T ss_pred ceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEc
Confidence 3589999999999988773 688999999999 4 268999999 76 9999999999998765 46899999999
Q ss_pred ccC-CCceEEEEEEeccccccCCeeeeEEecccCC-----CceEEEEEEEe
Q 003259 557 EIF-GDENMGSARVNLEGLVEGSVRDIWVPLEKVN-----TGELRLQIEAT 601 (835)
Q Consensus 557 d~~-~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~-----~G~I~l~l~~~ 601 (835)
+.. ++++||++.++|..+..+ .+|++|.+.. .|.|.+.+.+.
T Consensus 576 D~~~~dd~iG~~~ipl~~L~~G---~r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 576 DSSSKNDFIGQSTIPWNSLKQG---YRHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CSSSCCEEEEEEEEEGGGBCCE---EEEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred CCCCCCceeEEEEEEHHHcCCC---cEEEeCCCCCcCCCCceEEEEEEEEE
Confidence 987 899999999999999764 3688986542 35666666553
No 87
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.12 E-value=4.5e-12 Score=144.93 Aligned_cols=98 Identities=19% Similarity=0.406 Sum_probs=14.3
Q ss_pred CCcEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe-Eeecccc-CC---CCCccceEEEEEeeCCceeEEEEEEEe-cc-
Q 003259 486 TGRKINVTVVEGKDLMPKDKSGKCDPYVKLQYGKI-VQRTRTA-HS---PNHVWNQKFELDEIGGGECLMVKCYNE-EI- 558 (835)
Q Consensus 486 ~g~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~~-~~kT~~~-~t---~nP~Wne~f~f~v~~~~~~L~i~V~d~-d~- 558 (835)
..+.|.|+|++|++|++++ ||||++++++. ..||+++ ++ .||.|||+|+|.+......|.|+|||+ +.
T Consensus 9 ~~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 9 VDNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRDSDKK 83 (483)
T ss_dssp EEECC--------------------------------------------------CCEECC-------------------
T ss_pred eccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEecCCcc
Confidence 3457999999999998775 99999999764 6799999 88 999999999998655567899999995 42
Q ss_pred --C-CCceEEEEEEeccccccCCeeeeEEeccc
Q 003259 559 --F-GDENMGSARVNLEGLVEGSVRDIWVPLEK 588 (835)
Q Consensus 559 --~-~d~~IG~~~i~L~~l~~~~~~~~w~~L~~ 588 (835)
. +|++||.+.+++.++..+...+.||+|.+
T Consensus 84 ~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 84 RKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp -----------------------CCEECC----
T ss_pred ccCCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 3 89999999999999988777889999953
No 88
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.01 E-value=1.4e-09 Score=130.61 Aligned_cols=105 Identities=14% Similarity=0.240 Sum_probs=84.7
Q ss_pred CcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECC------eEeeeeeecC-CCCCeeee-EEEee-cC---CCcEEEEE
Q 003259 616 SGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD------LKKRTKVIFK-TLNPQWHQ-TLEFP-DD---GSPLTLHV 683 (835)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~v~~~-t~nP~wne-~f~f~-v~---~~~L~i~V 683 (835)
.....|+|+|++|++|+.. .+||||+|.+.+ .++||+++++ ++||+||| +|.|. +. -..|.|+|
T Consensus 722 ~~~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V 797 (885)
T 3ohm_B 722 IVANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAA 797 (885)
T ss_dssp CCCEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEE
T ss_pred ccceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEE
Confidence 3456899999999999853 689999999953 3579999986 59999999 69998 63 35799999
Q ss_pred EECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCCC-----CcEEEEEEEE
Q 003259 684 RDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR-----KGEIHVLITR 731 (835)
Q Consensus 684 ~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~l~~ 731 (835)
||+| +++||++.+||..|..+. ++++|.+.. .|.|.+.+++
T Consensus 798 ~D~d----ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l~~atLfv~i~~ 843 (885)
T 3ohm_B 798 FEEG----GKFVGHRILPVSAIRSGY---HYVCLRNEANQPLCLPALLIYTEA 843 (885)
T ss_dssp EETT----TEEEEEEEEETTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEE
T ss_pred EcCC----ccEEeeEEEEHHHcCCCc---eEEEecCCCCCccCceEEEEEEEE
Confidence 9997 789999999999997763 467775432 3777777777
No 89
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.96 E-value=2.1e-09 Score=128.35 Aligned_cols=105 Identities=23% Similarity=0.325 Sum_probs=85.3
Q ss_pred CcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECC-------eEeeeeeecC-CCCCeeeeE-EEee-cC---CCcEEEE
Q 003259 616 SGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD-------LKKRTKVIFK-TLNPQWHQT-LEFP-DD---GSPLTLH 682 (835)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~-------~~~kT~v~~~-t~nP~wne~-f~f~-v~---~~~L~i~ 682 (835)
...+.|+|+|++|++|+.. .+||||+|.+.+ .++||+++++ ++||+|||+ |.|. +. -..|.|+
T Consensus 647 ~~~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~ 722 (816)
T 3qr0_A 647 VVAGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRII 722 (816)
T ss_dssp SCCEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEE
T ss_pred ccceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEE
Confidence 3458999999999999853 689999999954 5779999986 699999998 9998 64 3579999
Q ss_pred EEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCCC-----CcEEEEEEEE
Q 003259 683 VRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR-----KGEIHVLITR 731 (835)
Q Consensus 683 V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~l~~ 731 (835)
|||++ +++||++.+||+.+..+. ++++|.+.. .+.|.+.+++
T Consensus 723 V~D~d----ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~~~atLfv~i~~ 769 (816)
T 3qr0_A 723 VSEEN----GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPLGLASVFAHIVA 769 (816)
T ss_dssp EEETT----SCEEEEEEEESTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEE
T ss_pred EEecC----CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCCCceEEEEEEEE
Confidence 99985 789999999999998764 567775432 2677777776
No 90
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.96 E-value=1.9e-09 Score=129.49 Aligned_cols=106 Identities=15% Similarity=0.231 Sum_probs=83.6
Q ss_pred CCcceEEEEEEEEeecCCcCCcCCCCCCEEEEEECC------eEeeee-eecC-CCCCeeee-EEEe-ecC---CCcEEE
Q 003259 615 GSGNGWIELVIVEARDLVAADLRGTSDPYVKVQYGD------LKKRTK-VIFK-TLNPQWHQ-TLEF-PDD---GSPLTL 681 (835)
Q Consensus 615 ~~~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~------~~~kT~-v~~~-t~nP~wne-~f~f-~v~---~~~L~i 681 (835)
....+.|+|+|++|++|+. +.+||||+|.+.+ +++||+ ++++ ++||+||| +|.| .+. -..|.|
T Consensus 674 ~~~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~ 749 (799)
T 2zkm_X 674 VVVATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRV 749 (799)
T ss_dssp TTTCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEE
T ss_pred ceeeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEE
Confidence 3457899999999999985 4789999999932 367999 8865 69999999 6999 664 357999
Q ss_pred EEEECCCCCCCCeEEEEEEEccccCCCCceeeEEecCCCC-----CcEEEEEEEE
Q 003259 682 HVRDHNALLASSSIGDCVVEYQRLPPNQMADKWIPLQGVR-----KGEIHVLITR 731 (835)
Q Consensus 682 ~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~w~~L~~~~-----~G~i~l~l~~ 731 (835)
+|||+| +++||++.+|++.+..+. +|++|.+.. .+.|.+.+++
T Consensus 750 ~V~D~d----~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 750 AVMEEG----NKFLGHRIIPINALNSGY---HHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp EEEETT----TEEEEEEEEEGGGBCCEE---EEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EEEEeC----CCccceEeeehhhcCCCc---EEEeccCCCCCCCCceEEEEEEEE
Confidence 999997 789999999999997653 577775432 2566666655
No 91
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.90 E-value=1.9e-08 Score=90.15 Aligned_cols=110 Identities=14% Similarity=0.207 Sum_probs=86.5
Q ss_pred cceEEEEEEEEeecCCcCCcCCCCCCEEEEEECCeE----eee-eeecCCCCCeeeeEEEeecC-CCcEEEEEEECCCCC
Q 003259 617 GNGWIELVIVEARDLVAADLRGTSDPYVKVQYGDLK----KRT-KVIFKTLNPQWHQTLEFPDD-GSPLTLHVRDHNALL 690 (835)
Q Consensus 617 ~~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~~~~~----~kT-~v~~~t~nP~wne~f~f~v~-~~~L~i~V~d~d~~~ 690 (835)
....|||.+.++.--+.....-..||||.|.+.... .+| ...++|..|+|||.|.-.+. +..|.|.|++...
T Consensus 4 m~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 4 MAPFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEGRVIQIVLMRAAE-- 81 (126)
T ss_dssp CCCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTTCEEEEEEEEETT--
T ss_pred cCccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCCEEEEEEEEcCCC--
Confidence 346788888766542222233468999999996532 255 67778999999999999987 7899999996554
Q ss_pred CCCeEEEEEEEccccC-----CCCceeeEEecCCCCCcEEEEEEEEE
Q 003259 691 ASSSIGDCVVEYQRLP-----PNQMADKWIPLQGVRKGEIHVLITRK 732 (835)
Q Consensus 691 ~d~~iG~~~i~l~~l~-----~~~~~~~w~~L~~~~~G~i~l~l~~~ 732 (835)
+++..|+|++.+|. .+...+.|++|++ .|+|++.++|+
T Consensus 82 --~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP--~Gkl~~~i~~~ 124 (126)
T 1yrk_A 82 --EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP--QAKVLMSVQYF 124 (126)
T ss_dssp --EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS--SCEEEEEEEEE
T ss_pred --CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEe
Confidence 79999999999986 4557899999995 89999999983
No 92
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.87 E-value=3.2e-09 Score=126.77 Aligned_cols=105 Identities=30% Similarity=0.489 Sum_probs=91.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeecccc-CCCCCccceEEEEEeeCC--ceeEEEEEEEeccC
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY-----GKIVQRTRTA-HSPNHVWNQKFELDEIGG--GECLMVKCYNEEIF 559 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l-----g~~~~kT~~~-~t~nP~Wne~f~f~v~~~--~~~L~i~V~d~d~~ 559 (835)
+.|.|++.+|++|..++..|.+||||++++ +..+++|+++ ++.||.|||+|.|.+... ...|.|+|||++..
T Consensus 172 ~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~~ 251 (674)
T 3pfq_A 172 EVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT 251 (674)
T ss_dssp SEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCSS
T ss_pred ceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecccc
Confidence 389999999999999999999999999999 3467899999 999999999999997653 56799999999988
Q ss_pred -CCceEEEEEEeccccccCCeeeeEEecccCCCce
Q 003259 560 -GDENMGSARVNLEGLVEGSVRDIWVPLEKVNTGE 593 (835)
Q Consensus 560 -~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~~G~ 593 (835)
++++||++.+++.++.... ...|+.|.....|+
T Consensus 252 ~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~~~g~ 285 (674)
T 3pfq_A 252 SRNDFMGSLSFGISELQKAG-VDGWFKLLSQEEGE 285 (674)
T ss_dssp SCCEECCBCCCBTTHHHHCC-EEEEEECBCTTGGG
T ss_pred cccccccccccchhhhccCC-cccceeecccccce
Confidence 8999999999999998765 47899997655444
No 93
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.85 E-value=2.7e-08 Score=90.39 Aligned_cols=110 Identities=16% Similarity=0.275 Sum_probs=87.7
Q ss_pred CcceEEEEEEEEeecCCcCC-cCCCCCCEEEEEECCe-E---eee-eeecCCCCCeeeeEEEeecC-CCcEEEEEEECCC
Q 003259 616 SGNGWIELVIVEARDLVAAD-LRGTSDPYVKVQYGDL-K---KRT-KVIFKTLNPQWHQTLEFPDD-GSPLTLHVRDHNA 688 (835)
Q Consensus 616 ~~~g~L~v~v~~a~~L~~~d-~~g~~DPyv~v~~~~~-~---~kT-~v~~~t~nP~wne~f~f~v~-~~~L~i~V~d~d~ 688 (835)
...+.|||.+.++.--+... ..-..||||.|.+... . .+| ...++|..|+|||.|.-.+. ...|.|.|++...
T Consensus 7 ~m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~Gr~l~i~Vfh~a~ 86 (138)
T 2enj_A 7 GMSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKGRVMQIIVKGKNV 86 (138)
T ss_dssp SCCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSSCEEEEEEECSSC
T ss_pred ccCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECCeEEEEEEEcCCC
Confidence 44577888887776543322 2336899999999653 2 577 66777999999999999987 7899999995443
Q ss_pred CCCCCeEEEEEEEccccC-----CCCceeeEEecCCCCCcEEEEEEEE
Q 003259 689 LLASSSIGDCVVEYQRLP-----PNQMADKWIPLQGVRKGEIHVLITR 731 (835)
Q Consensus 689 ~~~d~~iG~~~i~l~~l~-----~~~~~~~w~~L~~~~~G~i~l~l~~ 731 (835)
+++..|+|++.+|. .+...+.|++|++ .|+|++.++|
T Consensus 87 ----~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--~Gkl~v~i~~ 128 (138)
T 2enj_A 87 ----DLISETTVELYSLAERCRKNNGKTEIWLELKP--QGRMLMNARY 128 (138)
T ss_dssp ----SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--SCEEEEEEEE
T ss_pred ----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEE
Confidence 79999999999986 4557899999995 8999999999
No 94
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.70 E-value=3.7e-07 Score=81.89 Aligned_cols=107 Identities=10% Similarity=0.198 Sum_probs=82.8
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECCeE----eec-ccc-CCCCCccceEEEEEeeCCceeEEEEEEEeccCCCc
Q 003259 489 KINVTVVEGKDLMPKDKSGKCDPYVKLQYGKIV----QRT-RTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIFGDE 562 (835)
Q Consensus 489 ~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~~~----~kT-~~~-~t~nP~Wne~f~f~v~~~~~~L~i~V~d~d~~~d~ 562 (835)
-|+|.+.++.--.-.......||||.+.++... .+| ..+ +|..|.||++|.-.+ .+...|.+.|+++.. +
T Consensus 7 flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V-~~Gr~l~i~Vfh~a~---~ 82 (126)
T 1yrk_A 7 FLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHI-YEGRVIQIVLMRAAE---E 82 (126)
T ss_dssp EEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEEC-CTTCEEEEEEEEETT---E
T ss_pred cEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeee-eCCEEEEEEEEcCCC---C
Confidence 688888776642222223468999999995432 254 566 999999999999884 456678999997653 9
Q ss_pred eEEEEEEeccccccC-----CeeeeEEecccCCCceEEEEEEEe
Q 003259 563 NMGSARVNLEGLVEG-----SVRDIWVPLEKVNTGELRLQIEAT 601 (835)
Q Consensus 563 ~IG~~~i~L~~l~~~-----~~~~~w~~L~~~~~G~I~l~l~~~ 601 (835)
+++.|.+.+++|..+ ...+.|+.|++ .|+|++.+.|.
T Consensus 83 fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP--~Gkl~~~i~~~ 124 (126)
T 1yrk_A 83 PVSEVTVGVSVLAERCKKNNGKAEFWLDLQP--QAKVLMSVQYF 124 (126)
T ss_dssp EEEEEEEEHHHHHHHHHTTTTEEEEEEECBS--SCEEEEEEEEE
T ss_pred eeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEe
Confidence 999999999999843 45689999986 79999999886
No 95
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.62 E-value=1.1e-07 Score=114.26 Aligned_cols=105 Identities=24% Similarity=0.323 Sum_probs=83.7
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeecccc-C-CCCCccce-EEEEE-eeCC-ceeEEEEEEEe
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK------IVQRTRTA-H-SPNHVWNQ-KFELD-EIGG-GECLMVKCYNE 556 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~------~~~kT~~~-~-t~nP~Wne-~f~f~-v~~~-~~~L~i~V~d~ 556 (835)
..|.|+|++|++|+.. .+||||+|.+.+ .+++|+++ + +.||.||| +|.|. +..+ ...|+|+|||+
T Consensus 725 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~ 800 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEET
T ss_pred eEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcC
Confidence 4799999999999753 589999999932 35799999 5 59999999 69998 5444 56899999998
Q ss_pred ccCCCceEEEEEEeccccccCCeeeeEEecccCC-----CceEEEEEEEee
Q 003259 557 EIFGDENMGSARVNLEGLVEGSVRDIWVPLEKVN-----TGELRLQIEATR 602 (835)
Q Consensus 557 d~~~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~-----~G~I~l~l~~~~ 602 (835)
+ +++||++.++|..|..+. ++++|.+.. .|.|.+.+.+..
T Consensus 801 d---ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 801 G---GKFVGHRILPVSAIRSGY---HYVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp T---TEEEEEEEEETTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred C---ccEEeeEEEEHHHcCCCc---eEEEecCCCCCccCceEEEEEEEEEe
Confidence 7 799999999999997653 567776532 367777777663
No 96
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.62 E-value=1.7e-07 Score=111.88 Aligned_cols=104 Identities=17% Similarity=0.258 Sum_probs=82.9
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------eEeecccc-C-CCCCccceE-EEEE-eeCC-ceeEEEEEEE
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQYGK-------IVQRTRTA-H-SPNHVWNQK-FELD-EIGG-GECLMVKCYN 555 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~lg~-------~~~kT~~~-~-t~nP~Wne~-f~f~-v~~~-~~~L~i~V~d 555 (835)
+.|.|+|++|++|+.+ .+||||+|.+.+ .+++|+++ + +.||.|||+ |.|. +..+ -..|+|.|||
T Consensus 650 ~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D 725 (816)
T 3qr0_A 650 GTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSE 725 (816)
T ss_dssp EEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred eEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEe
Confidence 4899999999999753 589999999932 57899998 4 699999998 9998 6544 4689999999
Q ss_pred eccCCCceEEEEEEeccccccCCeeeeEEecccCC-----CceEEEEEEEe
Q 003259 556 EEIFGDENMGSARVNLEGLVEGSVRDIWVPLEKVN-----TGELRLQIEAT 601 (835)
Q Consensus 556 ~d~~~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~~-----~G~I~l~l~~~ 601 (835)
++ +++||++.++|..|..+. ++++|.+.. .+.|.+.+...
T Consensus 726 ~d---ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~~~atLfv~i~~~ 770 (816)
T 3qr0_A 726 EN---GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPLGLASVFAHIVAK 770 (816)
T ss_dssp TT---SCEEEEEEEESTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cC---CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCCCceEEEEEEEEE
Confidence 85 799999999999997653 567886643 25566666555
No 97
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.61 E-value=1.4e-07 Score=113.43 Aligned_cols=93 Identities=23% Similarity=0.348 Sum_probs=76.3
Q ss_pred CcEEEEEEEEeecCCCCCCCCCCCcEEEEEE-C---C--eEeecc-cc--CCCCCccce-EEEE-EeeCC-ceeEEEEEE
Q 003259 487 GRKINVTVVEGKDLMPKDKSGKCDPYVKLQY-G---K--IVQRTR-TA--HSPNHVWNQ-KFEL-DEIGG-GECLMVKCY 554 (835)
Q Consensus 487 g~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l-g---~--~~~kT~-~~--~t~nP~Wne-~f~f-~v~~~-~~~L~i~V~ 554 (835)
.+.|.|+|++|++|+. +.+||||+|.+ | + ++++|+ ++ ++.||.||| +|.| .+..+ -..|+|.||
T Consensus 677 ~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~ 752 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVM 752 (799)
T ss_dssp CEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEE
T ss_pred eeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEE
Confidence 4589999999999974 46899999999 4 1 368999 77 569999999 6999 66554 458999999
Q ss_pred EeccCCCceEEEEEEeccccccCCeeeeEEecccC
Q 003259 555 NEEIFGDENMGSARVNLEGLVEGSVRDIWVPLEKV 589 (835)
Q Consensus 555 d~d~~~d~~IG~~~i~L~~l~~~~~~~~w~~L~~~ 589 (835)
|++ +++||++.++|..|..+ .+|++|.+.
T Consensus 753 D~d---~d~iG~~~ipl~~L~~G---~r~v~L~~~ 781 (799)
T 2zkm_X 753 EEG---NKFLGHRIIPINALNSG---YHHLCLHSE 781 (799)
T ss_dssp ETT---TEEEEEEEEEGGGBCCE---EEEEEEECT
T ss_pred EeC---CCccceEeeehhhcCCC---cEEEeccCC
Confidence 986 79999999999999754 367888654
No 98
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.53 E-value=5.8e-07 Score=81.68 Aligned_cols=107 Identities=12% Similarity=0.223 Sum_probs=83.2
Q ss_pred EEEEEEEEeecCCCCC-CCCCCCcEEEEEECCe-E---eec-ccc-CCCCCccceEEEEEeeCCceeEEEEEEEeccCCC
Q 003259 489 KINVTVVEGKDLMPKD-KSGKCDPYVKLQYGKI-V---QRT-RTA-HSPNHVWNQKFELDEIGGGECLMVKCYNEEIFGD 561 (835)
Q Consensus 489 ~L~V~V~~a~~L~~~~-~~g~~dpyv~v~lg~~-~---~kT-~~~-~t~nP~Wne~f~f~v~~~~~~L~i~V~d~d~~~d 561 (835)
-|+|.+.+..--+... .....||||.|.++.. . .+| ..+ +|..|.||++|.-.+ .....|.|.|+++. .
T Consensus 11 flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V-~~Gr~l~i~Vfh~a---~ 86 (138)
T 2enj_A 11 FLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHI-NKGRVMQIIVKGKN---V 86 (138)
T ss_dssp CEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECC-CSSCEEEEEEECSS---C
T ss_pred ceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeE-ECCeEEEEEEEcCC---C
Confidence 6899998876433222 2346899999999542 2 566 555 899999999999874 45667899999654 3
Q ss_pred ceEEEEEEeccccccC-----CeeeeEEecccCCCceEEEEEEEe
Q 003259 562 ENMGSARVNLEGLVEG-----SVRDIWVPLEKVNTGELRLQIEAT 601 (835)
Q Consensus 562 ~~IG~~~i~L~~l~~~-----~~~~~w~~L~~~~~G~I~l~l~~~ 601 (835)
++++.|.+.+++|..+ ...+.|+.|++ .|+|++.+.|.
T Consensus 87 ~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP--~Gkl~v~i~~~ 129 (138)
T 2enj_A 87 DLISETTVELYSLAERCRKNNGKTEIWLELKP--QGRMLMNARYF 129 (138)
T ss_dssp SCCEEEEEESHHHHHHHHHTTTCEEEEEECBS--SCEEEEEEEEC
T ss_pred CeeeEEEEEHHHHHhhhccCCCceEEEEeccc--CcEEEEEEEEE
Confidence 8999999999999844 35689999986 79999999997
No 99
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=91.53 E-value=1.4 Score=41.26 Aligned_cols=121 Identities=17% Similarity=0.227 Sum_probs=84.5
Q ss_pred CCCcceEEEEEEEEeecCCcC-CcCCCCCCEEEEEEC---CeEeeeeeecCCCCCeeeeEEEeecC----------CCcE
Q 003259 614 IGSGNGWIELVIVEARDLVAA-DLRGTSDPYVKVQYG---DLKKRTKVIFKTLNPQWHQTLEFPDD----------GSPL 679 (835)
Q Consensus 614 ~~~~~g~L~v~v~~a~~L~~~-d~~g~~DPyv~v~~~---~~~~kT~v~~~t~nP~wne~f~f~v~----------~~~L 679 (835)
..+..+.+.++|.++.--+.. ...+..+|+.-+.+. -+.+-|.+.. ..+|.+|-+..|.|. ...+
T Consensus 13 l~~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 13 LERGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CCSSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred ccCCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 456778999999998732221 123456787666663 3566777776 899999998888863 4689
Q ss_pred EEEEEECCCCCCCCeEEEEEEEccccCCC-CceeeEEecCC-----CCCcEEEEEEEEEecCC
Q 003259 680 TLHVRDHNALLASSSIGDCVVEYQRLPPN-QMADKWIPLQG-----VRKGEIHVLITRKVPEL 736 (835)
Q Consensus 680 ~i~V~d~d~~~~d~~iG~~~i~l~~l~~~-~~~~~w~~L~~-----~~~G~i~l~l~~~~p~~ 736 (835)
.+++..... +..+.||.+.|+|.++... .....-.+|.| ..-|.|.+.++++.|-.
T Consensus 92 ~lELhqa~g-~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~Pi~ 153 (156)
T 2yrb_A 92 TLEVHQAYS-TEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRVSGP 153 (156)
T ss_dssp EEEEEEECS-SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEECCC
T ss_pred EEEEEEeeC-CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEecccC
Confidence 999987653 3467999999999988533 23444556643 23599999999977753
No 100
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=84.17 E-value=2.9 Score=50.77 Aligned_cols=85 Identities=16% Similarity=0.150 Sum_probs=60.9
Q ss_pred ceEEEEEEEEeecCCcCCcCCCCCCEEEEEE--CCe----EeeeeeecCCCCCeeeeEEEeecC------CCcEEEEEEE
Q 003259 618 NGWIELVIVEARDLVAADLRGTSDPYVKVQY--GDL----KKRTKVIFKTLNPQWHQTLEFPDD------GSPLTLHVRD 685 (835)
Q Consensus 618 ~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~--~~~----~~kT~v~~~t~nP~wne~f~f~v~------~~~L~i~V~d 685 (835)
...++|+|..+.++... ...+-||++.+ |++ ...|..+....+|.|||.+.|++. +..|.|+||+
T Consensus 216 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 292 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYA 292 (940)
T ss_dssp CSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEE
Confidence 46899999999998654 35678888766 553 345666666788999999999862 6889999999
Q ss_pred CCCC--C----------CCCeEEEEEEEcccc
Q 003259 686 HNAL--L----------ASSSIGDCVVEYQRL 705 (835)
Q Consensus 686 ~d~~--~----------~d~~iG~~~i~l~~l 705 (835)
...- + .+..||.+.+++-+-
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp EC----------------CEEEEEEEEESBCT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECC
Confidence 6431 1 245899999988754
No 101
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=79.84 E-value=22 Score=33.17 Aligned_cols=113 Identities=11% Similarity=0.072 Sum_probs=72.6
Q ss_pred cEEEEEEEEeecCCCCC--CCCCCCc--EEEEEEC-CeEeeccccCCCCCccceEEEEEeeCC--------ceeEEEEEE
Q 003259 488 RKINVTVVEGKDLMPKD--KSGKCDP--YVKLQYG-KIVQRTRTAHSPNHVWNQKFELDEIGG--------GECLMVKCY 554 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~--~~g~~dp--yv~v~lg-~~~~kT~~~~t~nP~Wne~f~f~v~~~--------~~~L~i~V~ 554 (835)
+.+.|.|.++. +.+.. ..+..+| ||...+- -+.+.|.+....+|.+|-+-.|.+..+ ...+.+++.
T Consensus 18 nlfEihi~~~~-~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELh 96 (156)
T 2yrb_A 18 NLFEIHINKVT-FSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVRGLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVH 96 (156)
T ss_dssp EEEEEEEEEEC-CCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEESSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEE
T ss_pred cEEEEEEeEEE-EcHHHHhhccccCCcEEEEEEEeceEeeecccccCCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEE
Confidence 37899999886 32110 1123345 5555553 456666666778999999999987543 347889998
Q ss_pred EeccCCCceEEEEEEeccccccCCe-eeeEEecccC-----CCceEEEEEEEe
Q 003259 555 NEEIFGDENMGSARVNLEGLVEGSV-RDIWVPLEKV-----NTGELRLQIEAT 601 (835)
Q Consensus 555 d~d~~~d~~IG~~~i~L~~l~~~~~-~~~w~~L~~~-----~~G~I~l~l~~~ 601 (835)
......-..+|.+.++|.++++... .....+|.+. .-|.|...++..
T Consensus 97 qa~g~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~ 149 (156)
T 2yrb_A 97 QAYSTEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLR 149 (156)
T ss_dssp EECSSCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEE
T ss_pred EeeCCCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEe
Confidence 8764456799999999999986643 2223344432 235555555554
No 102
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=79.83 E-value=21 Score=35.24 Aligned_cols=53 Identities=9% Similarity=-0.007 Sum_probs=39.3
Q ss_pred eEeecccc-CCCCCccceEEEEEeeCC---ceeEEEEEEEeccC-----CCceEEEEEEecc
Q 003259 520 IVQRTRTA-HSPNHVWNQKFELDEIGG---GECLMVKCYNEEIF-----GDENMGSARVNLE 572 (835)
Q Consensus 520 ~~~kT~~~-~t~nP~Wne~f~f~v~~~---~~~L~i~V~d~d~~-----~d~~IG~~~i~L~ 572 (835)
..++|.+. .+.+|.|+|++.+.+... ...|.|.+++.... .+..+|.+.++|-
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 36788888 999999999999997764 67899998875432 2346677666664
No 103
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=79.05 E-value=19 Score=35.53 Aligned_cols=55 Identities=16% Similarity=0.177 Sum_probs=41.6
Q ss_pred eeeeeccCCCCCCcccceeEEEEEcC---CceEEEEEEEeCCCCCCc---ceeEEEEEecc
Q 003259 349 LTRRTDARPGSDPRWDSMFNMVLHEE---TGTVRFNLYECIPGHVKY---DYLTSCEVKMK 403 (835)
Q Consensus 349 ~~~t~~i~~~~nP~W~etf~~~v~~~---~~~L~~~v~d~~~~~~kd---d~LG~~~i~L~ 403 (835)
..++.+...+.+|.|+|++-+.+... ...|.|.+++......+| ..+|.+.+||-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 35666677899999999999998764 469999999876422222 37899999973
No 104
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=74.80 E-value=8.1 Score=47.31 Aligned_cols=86 Identities=16% Similarity=0.212 Sum_probs=60.5
Q ss_pred ceEEEEEEEEeecCCcCCcCCCCCCEEEEEE--CCe----EeeeeeecCCCCCeeeeEEEeecC------CCcEEEEEEE
Q 003259 618 NGWIELVIVEARDLVAADLRGTSDPYVKVQY--GDL----KKRTKVIFKTLNPQWHQTLEFPDD------GSPLTLHVRD 685 (835)
Q Consensus 618 ~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~--~~~----~~kT~v~~~t~nP~wne~f~f~v~------~~~L~i~V~d 685 (835)
...++|+|..+.++... .....+-||++.+ |++ ..+|+.+. ..+|.|||.++|++. ...|.|+||+
T Consensus 354 ~~~f~v~i~~~~~~n~~-~~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVN-IRDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCC-CSSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCC-ccccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 36889999999888643 2335688999888 543 34454443 467889999999862 6889999998
Q ss_pred CCCC----CCCCeEEEEEEEcccc
Q 003259 686 HNAL----LASSSIGDCVVEYQRL 705 (835)
Q Consensus 686 ~d~~----~~d~~iG~~~i~l~~l 705 (835)
.... ..+..||.+.++|-+-
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCT
T ss_pred ecCccCcccccceeEEeeeeeEcc
Confidence 6642 1245799999998754
No 105
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=69.00 E-value=18 Score=43.77 Aligned_cols=83 Identities=17% Similarity=0.202 Sum_probs=59.0
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----Eeecccc-CCCCCccceEEEEEeeC---C-ceeEEEEEEEec
Q 003259 489 KINVTVVEGKDLMPKDKSGKCDPYVKLQY--GKI----VQRTRTA-HSPNHVWNQKFELDEIG---G-GECLMVKCYNEE 557 (835)
Q Consensus 489 ~L~V~V~~a~~L~~~~~~g~~dpyv~v~l--g~~----~~kT~~~-~t~nP~Wne~f~f~v~~---~-~~~L~i~V~d~d 557 (835)
.++|+|..+.++... ...+-||++.+ |++ ...|..+ ...+|.|||.+.|.+.- + +..|.|.+|+..
T Consensus 218 ~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 294 (940)
T 2wxf_A 218 PFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALYAVV 294 (940)
T ss_dssp EEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEEEEC
T ss_pred ceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEEEec
Confidence 799999999998643 34677888766 653 3455556 67889999999998643 3 789999999852
Q ss_pred cC-------------CCceEEEEEEecccc
Q 003259 558 IF-------------GDENMGSARVNLEGL 574 (835)
Q Consensus 558 ~~-------------~d~~IG~~~i~L~~l 574 (835)
.. ....+|.+.++|-+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~ 324 (940)
T 2wxf_A 295 EKAKKARSTKKKSKKADCPIAWANLMLFDY 324 (940)
T ss_dssp ----------------CEEEEEEEEESBCT
T ss_pred CCccCccccccccccccceEEEEeeeEECC
Confidence 21 234788888887664
No 106
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=66.22 E-value=15 Score=44.56 Aligned_cols=86 Identities=16% Similarity=0.061 Sum_probs=54.7
Q ss_pred eEEEEEEEEeecCCcCCcCCCCCCEEEEEE--CCe---EeeeeeecCCCCCeeeeEEEeecC------CCcEEEEEEECC
Q 003259 619 GWIELVIVEARDLVAADLRGTSDPYVKVQY--GDL---KKRTKVIFKTLNPQWHQTLEFPDD------GSPLTLHVRDHN 687 (835)
Q Consensus 619 g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~--~~~---~~kT~v~~~t~nP~wne~f~f~v~------~~~L~i~V~d~d 687 (835)
..++|.|..+...... .+...+-||++.+ |++ ..+|..+.-+.+|.|||.++|++. +..|.++||+..
T Consensus 218 ~~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 4667777776542111 1224577888655 663 234555555678999999999852 688999999753
Q ss_pred CC----------------CCCCeEEEEEEEcccc
Q 003259 688 AL----------------LASSSIGDCVVEYQRL 705 (835)
Q Consensus 688 ~~----------------~~d~~iG~~~i~l~~l 705 (835)
.- +....||.+.++|-+-
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 297 KPALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp C--------------------CEEEEEEEESBCT
T ss_pred cCccccccccccccccccccceeEEEEeeeeecC
Confidence 22 1345799999988654
No 107
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=59.19 E-value=4.8 Score=49.49 Aligned_cols=67 Identities=19% Similarity=0.209 Sum_probs=49.9
Q ss_pred ceEEEEEEEEeecCCcCCcCCCCCCEEEEEE--CCe----EeeeeeecCCCCCeeeeEEEeecC------CCcEEEEEEE
Q 003259 618 NGWIELVIVEARDLVAADLRGTSDPYVKVQY--GDL----KKRTKVIFKTLNPQWHQTLEFPDD------GSPLTLHVRD 685 (835)
Q Consensus 618 ~g~L~v~v~~a~~L~~~d~~g~~DPyv~v~~--~~~----~~kT~v~~~t~nP~wne~f~f~v~------~~~L~i~V~d 685 (835)
...++|+|..+.++... ...+-||.+.+ |++ ...|+.+.-..+|.|||.+.|++. +..|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 46899999999988654 35678887554 664 345655555788999999999862 6789999998
Q ss_pred CC
Q 003259 686 HN 687 (835)
Q Consensus 686 ~d 687 (835)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 63
No 108
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=56.14 E-value=36 Score=41.71 Aligned_cols=87 Identities=13% Similarity=0.078 Sum_probs=60.8
Q ss_pred cEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----EeeccccCCCCCccceEEEEEeeC----CceeEEEEEEEec
Q 003259 488 RKINVTVVEGKDLMPKDKSGKCDPYVKLQY--GKI----VQRTRTAHSPNHVWNQKFELDEIG----GGECLMVKCYNEE 557 (835)
Q Consensus 488 ~~L~V~V~~a~~L~~~~~~g~~dpyv~v~l--g~~----~~kT~~~~t~nP~Wne~f~f~v~~----~~~~L~i~V~d~d 557 (835)
..++|+|..+.++.... ....+-||++.+ |++ ..+|+.+...+|.|||..+|.+.- ....|.|.||+..
T Consensus 355 ~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~~~ 433 (1091)
T 3hhm_A 355 SALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVPCSNPRWNEWLNYDIYIPDLPRAARLCLSICSVK 433 (1091)
T ss_dssp SEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCCTTSCEEEEEEEEEEEGGGCCTTCEEEEEECCCC
T ss_pred CCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccCCCCCCCCeeEEecCccccCChhcEEEEEEEEec
Confidence 37999999999885322 334677888877 543 455655544567899999998643 3789999999855
Q ss_pred cC-----CCceEEEEEEeccccc
Q 003259 558 IF-----GDENMGSARVNLEGLV 575 (835)
Q Consensus 558 ~~-----~d~~IG~~~i~L~~l~ 575 (835)
.. ....+|.+.++|-+..
T Consensus 434 ~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 434 GRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCC-------CCEEEEEESBCTT
T ss_pred CccCcccccceeEEeeeeeEccC
Confidence 32 2357899999887753
No 109
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=48.05 E-value=15 Score=45.07 Aligned_cols=68 Identities=12% Similarity=0.277 Sum_probs=45.2
Q ss_pred ccEEEEEEEecCCCCCCCCCCCCcccccccCCCCccccccCCCCcCeEEEEEe--cc-----eeeeeccCCCCCCcccce
Q 003259 294 GGIVYVRVISASKLSRSSLRGSPSRRQQNYSADSSLEEHYEDKDLTTFVEIEL--EE-----LTRRTDARPGSDPRWDSM 366 (835)
Q Consensus 294 ~GvL~V~V~~A~~L~~~~~~g~~~~~~~~~~~dpy~~~~~~~~~~dpyv~v~~--g~-----~~~t~~i~~~~nP~W~et 366 (835)
..-++|+|.++.++...+. .+-||++.+ |. ...|+.+.-..+|.|||.
T Consensus 352 ~~~f~i~i~~~~~~~~~~~-------------------------~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnew 406 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTEET-------------------------VKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQ 406 (1092)
T ss_dssp CSEEEEEECCCCCCCCCSS-------------------------CCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEE
T ss_pred CCCEEEEEEEeccCCCCCC-------------------------ceEEEEEEEEECCEEccCceecccccCCCCCcccee
Confidence 4789999999999864421 144666555 42 122333444678999998
Q ss_pred eEEEE--EcC--CceEEEEEEEeC
Q 003259 367 FNMVL--HEE--TGTVRFNLYECI 386 (835)
Q Consensus 367 f~~~v--~~~--~~~L~~~v~d~~ 386 (835)
..|.+ .+. +..|.|.||+..
T Consensus 407 l~f~i~~~dLPr~a~L~~ti~~~~ 430 (1092)
T 2y3a_A 407 LEFDINICDLPRMARLCFAVYAVL 430 (1092)
T ss_dssp EEEEEESSSCCTTCEEEEECCCC-
T ss_pred EEeCCccccCChhcEEEEEEEEec
Confidence 77765 443 679999999864
No 110
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=45.01 E-value=81 Score=38.31 Aligned_cols=85 Identities=15% Similarity=0.133 Sum_probs=55.9
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---Eeecccc-CCCCCccceEEEEEeeC---C-ceeEEEEEEEecc
Q 003259 489 KINVTVVEGKDLMPKDKSGKCDPYVKLQY--GKI---VQRTRTA-HSPNHVWNQKFELDEIG---G-GECLMVKCYNEEI 558 (835)
Q Consensus 489 ~L~V~V~~a~~L~~~~~~g~~dpyv~v~l--g~~---~~kT~~~-~t~nP~Wne~f~f~v~~---~-~~~L~i~V~d~d~ 558 (835)
.++|.|..+...... .+...+-||++.+ |++ ..+|..+ -+.+|.|||.++|.+.- + +..|.+.+|+...
T Consensus 219 ~f~i~i~~~~~~~~~-~~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~ 297 (961)
T 1e7u_A 219 KFRVKIRGIDIPVLP-RTADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAK 297 (961)
T ss_dssp EEEEEEEEEECSSCC-TTSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC
T ss_pred ceEEEEeeccccccc-CCCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEeccc
Confidence 799999988752211 1234577887766 653 2345555 67789999999998643 3 7789999997532
Q ss_pred C-----------------CCceEEEEEEecccc
Q 003259 559 F-----------------GDENMGSARVNLEGL 574 (835)
Q Consensus 559 ~-----------------~d~~IG~~~i~L~~l 574 (835)
. +...+|.+.++|-+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lfd~ 330 (961)
T 1e7u_A 298 PALSGKTSAEMPSPESKGKAQLLYYVNLLLIDH 330 (961)
T ss_dssp --------------------CEEEEEEEESBCT
T ss_pred CccccccccccccccccccceeEEEEeeeeecC
Confidence 1 234678888877664
Done!