Query 003263
Match_columns 835
No_of_seqs 230 out of 420
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 19:08:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003263.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003263hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1msw_D DNA-directed RNA polyme 100.0 1E-151 5E-156 1348.8 40.6 621 167-834 20-681 (883)
2 3spa_A Mtrpol, DNA-directed RN 100.0 3E-139 9E-144 1246.6 45.5 612 171-834 296-940 (1134)
3 3q23_A Virion RNA polymerase; 97.7 0.00012 4.2E-09 86.2 12.1 306 487-811 338-705 (1118)
4 1iv0_A Hypothetical protein; r 14.9 55 0.0019 29.2 1.3 36 691-726 42-81 (98)
5 1d2v_A Myeloperoxidase; heme-p 11.7 41 0.0014 30.4 -0.5 11 711-721 9-19 (104)
6 1nu0_A Hypothetical protein YQ 11.4 65 0.0022 30.5 0.8 34 694-727 47-84 (138)
7 1nov_D Nodamura virus coat pro 10.2 67 0.0023 25.1 0.3 34 693-728 8-41 (44)
8 3bhw_A Uncharacterized protein 9.8 2.2E+02 0.0074 28.6 4.0 29 352-380 137-165 (209)
9 1ny9_A Transcriptional activat 9.5 2.8E+02 0.0097 25.6 4.4 55 172-226 32-89 (143)
10 4ev0_A Transcription regulator 8.4 8.9E+02 0.03 22.4 7.7 81 182-262 131-211 (216)
No 1
>1msw_D DNA-directed RNA polymerase, bacteriophage T7 RNA; T7RNAP elongation complex, transcription/DNA/RNA complex; 2.10A {Enterobacteria phage T7} SCOP: e.8.1.3 PDB: 1h38_A 1cez_A 1qln_A* 1s0v_A* 1s76_D* 1s77_D* 4rnp_A 3e2e_A* 3e3j_C* 1aro_P 2pi4_A* 2pi5_A
Probab=100.00 E-value=1.3e-151 Score=1348.80 Aligned_cols=621 Identities=27% Similarity=0.439 Sum_probs=525.3
Q ss_pred HhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccCCCChhHHHHHHHHHHHHHHHHHHHHHHHH-hccCc
Q 003263 167 YREMKKRKFN-LLRRRQVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQR-TKKQK 244 (835)
Q Consensus 167 ~~~~~~~~~~-~l~~RQ~~LE~~a~~~a~~r~r~~~~~~~~~g~a~~~~~~~~ll~~w~~~L~~~I~~e~~~~~-~~~~r 244 (835)
-++.-...|+ .|++||++||++++++|++||++++++++++|+++++|++++++.+|+++|+++|+++++..+ +.|.+
T Consensus 20 ~~~~~~~~~~~~l~~rQ~~lE~e~~~~a~~r~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~l~~~i~~~~~~~~~~~g~~ 99 (883)
T 1msw_D 20 PFNTLADHYGERLAREQLALEHESYEMGEARFRKMFERQLKAGEVADNAAAKPLITTLLPKMIARINDWFEEVKAKRGKR 99 (883)
T ss_dssp HHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCGGGSTTTHHHHHHHHHHHHHHHHHHHHHHHHSCSCC
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCChhhHHHHHHHHHHHHHHHHHHHHHHhcccCcc
Confidence 3444456676 678999999999999999999999999999999999999999999999999999999988776 36779
Q ss_pred cchhhhhccCChhHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhHHHHHH
Q 003263 245 AAYAPHIELLPADKVAVIVMHKMMGLVMAGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIADTEEVLSK 324 (835)
Q Consensus 245 ~~y~p~L~~l~~e~lA~Iti~~~l~~~~~~~~~~~v~~~~la~~IG~aVe~E~~~~~~~~k~kk~~~~~~~~~~~~~~~k 324 (835)
+.|+|||++|+||++|+|||+++|+++++ .+++++++++.+||++||+|++++++.++.++++.+.
T Consensus 100 ~~~~~~L~~l~~e~lA~iti~~~l~~~~~---~~~~~~~~~~~~iG~ave~E~~~~~~~~~~~~~~~~~----------- 165 (883)
T 1msw_D 100 PTAFQFLQEIKPEAVAYITIKTTLACLTS---ADNTTVQAVASAIGRAIEDEARFGRIRDLEAKHFKKN----------- 165 (883)
T ss_dssp CTTTTTTTSSCHHHHHHHHHHHHHHHHHH---CSCCBHHHHHHHHHHHHHHHHHHHHHHHSSCSSHHHH-----------
T ss_pred hHHHHHHHhCCHHHHHHHHHHHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-----------
Confidence 99999999999999999999999999987 3568899999999999999999999887665433221
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHhh-c-----CCCCCCCCHHHHHHHHHHHHHHHHHH-ccccCCCCCCCCCCCCccCce
Q 003263 325 EKELLRKRVNSLIKSKRVMEAQKLL-K-----NEETKPWGRDTQAKLGSRLVELLIET-AYVQHPVNPADYSPPDVRPAF 397 (835)
Q Consensus 325 ~~~~l~k~~~~~~k~~~~~~~~~~~-~-----~~~~~~W~~~~~~kvG~~Ll~~L~e~-~~i~~~~~~~~~~~~~~~paF 397 (835)
..+.++++.+...++...+.+.... + ++.+.+|+..++++||++|+++|+++ +.|++....
T Consensus 166 ~~~~l~~~~~~~~k~~~~~~~~~~~~~~g~~~~~~~~~W~~~~~~~vG~~Li~~l~~~~~~~~~~~~~------------ 233 (883)
T 1msw_D 166 VEEQLNKRVGHVYKKAFMQVVEADMLSKGLLGGEAWSSWHKEDSIHVGVRCIEMLIESTGMVSLHRQN------------ 233 (883)
T ss_dssp TSHHHHHSCSHHHHHHHHHHHHHHSTTTTTTTTCCCCCCCTTHHHHHHHHHHHHHHHHCTTEEEECC-------------
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHhhhccccccCCCCCCCHHHHHHHHHHHHHHHHHhhCCcceeccc------------
Confidence 1123333333333333333333211 1 26689999999999999999999995 666653221
Q ss_pred eEEeEeeecCCCCccceeEEEEEcCHHHHHHHHhhh---hcccCCCCceeeCCCCCcCCCCcccccC---CccceecCCc
Q 003263 398 RHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSA---KHMLIPYVPMLVPPKKWKGYNKGGYLFL---PSYVMRTHGS 471 (835)
Q Consensus 398 ~h~~~~~~~~~g~~~~k~~gvi~~~~~~~~~l~~~~---~~~~~~~LPMlvPPkpW~~~~~GGYL~~---~~~~~R~~~~ 471 (835)
.|.. .+++|+|++||.+++.+.+.. ..+.+.+|||||||+||+++.+||||+. +..++|++..
T Consensus 234 ----------~~~~-~k~~~~i~~~~~~~~~l~~~~~~~~~~~~~~lPMlvpP~pW~~~~~GGYl~~~~~~~~~ir~~~~ 302 (883)
T 1msw_D 234 ----------AGVV-GQDSETIELAPEYAEAIATRAGALAGISPMFQPCVVPPKPWTGITGGGYWANGRRPLALVRTHSK 302 (883)
T ss_dssp ------------------CCEEEECHHHHHHHHHHHHHHTTSCCCCCCBSSCCBCCSSSBSCBSSSCCSSCCBSEECSST
T ss_pred ----------cCCC-CceeeEEEeCHHHHHHHhhcccchhhcCCCCCceeeCCccCCCCCCCCccCCCcccchhhcccCH
Confidence 1111 357899999999999997642 3355569999999999999999999974 3456776532
Q ss_pred HHHHHHHHhccccchHHHHHHHHhhcCcceEEcHHHHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCCCCC--HHHHHHHH
Q 003263 472 RKQQEALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWV-SGGNIAGLVDRNDVLIPEKPLSED--MTEVQKWK 548 (835)
Q Consensus 472 ~~q~~~lk~~~~~~l~~v~~aLN~Lqst~WrIN~~VL~vi~~~w~-~g~~i~~l~~~~~~p~P~~p~~~d--~~~~~~wk 548 (835)
.++++..+++++.||++||+||+|||+||++||+||+++|+ +|+++++||+..+.|+|++|++.+ ++++++|+
T Consensus 303 ----~~~~~~~~~~l~~v~~aLN~L~~t~w~IN~~vL~vi~~~~~~~g~~~~~ip~~~~~~~P~~p~~~d~~~~~~~~~k 378 (883)
T 1msw_D 303 ----KALMRYEDVYMPEVYKAINIAQNTAWKINKKVLAVANVITKWKHCPVEDIPAIEREELPMKPEDIDMNPEALTAWK 378 (883)
T ss_dssp ----THHHHTTTCCCHHHHHHHHHHHTCCEEECHHHHHHHHHHTTCSSCSSTTCCCSSCCCCCCC-----------CCTT
T ss_pred ----HHHHhccccchHHHHHHHHHhccCCeEecHHHHHHHHHHHhhcCCcccCCCCcCcCCCCCCCCccccCHHHHHHHH
Confidence 34666677899999999999999999999999999999999 999999999988899999987543 67889999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhHHHHHHHHhcCCCceeeccccCCCCccccCCCCCCCCCchhhhhhhhcccCccCCcchh
Q 003263 549 WSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGRPLGKSGL 628 (835)
Q Consensus 549 ~~~~~~~~~~~~~~S~R~~~~~~L~iA~~f~~~~~fYfPhnlDFRGR~YP~~~~Ln~qGsDl~RsLL~FaegkpLG~~Gl 628 (835)
+.++++++.++++||+||+++++|++|++|+|++.||||||+|||||+||+| ||||||+|+|||||+||+|+|||++||
T Consensus 379 ~~~~~~~~~~~~~~S~r~~~~~~L~iA~~f~~~~~fYfPhnlDFRGR~Yp~p-~Ln~~GsDl~RsLL~FaegkpLG~~Gl 457 (883)
T 1msw_D 379 RAAAAVYRKDKARKSRRISLEFMLEQANKFANHKAIWFPYNMDWRGRVYAVS-MFNPQGNDMTKGLLTLAKGKPIGKEGY 457 (883)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSSCSCBBCCEEEETTSCEEESS-SSCTTSCHHHHHHEEESSCEECHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEeecccCCCCcCCCCC-CCCCCcchHHHHHHHhccCCccChhHH
Confidence 9999999999999999999999999999999988999999999999999995 999999999999999999999999999
Q ss_pred HHHHHHHhhhhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCCchhHhhCCChHHHHHHHHHHHHHHhcCCCCcccccc
Q 003263 629 RWLKIHLANLFSGGVEKLSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALKSSSPHSVISHL 708 (835)
Q Consensus 629 ~WLKIhlANlyG~G~DK~S~deRi~wv~~n~~~I~dsA~dPL~g~~wW~~AD~PwQfLAaC~El~~al~s~dP~~y~S~l 708 (835)
+|||||+||+| |+||+||+||++||++|+++|++||+|||+ .+||++||+||||||+|+||++|+++|+ +|+|||
T Consensus 458 ~WLkIhlAN~~--G~dK~s~~eRi~wv~~n~~~I~dsA~~Pl~-~~wW~~Ad~PwQfLA~C~El~~a~~~~~--~y~S~l 532 (883)
T 1msw_D 458 YWLKIHGANCA--GVDKVPFPERIKFIEENHENIMACAKSPLE-NTWWAEQDSPFCFLAFCFEYAGVQHHGL--SYNCSL 532 (883)
T ss_dssp HHHHHHHHHHT--TCCSSCHHHHHHHHHHTHHHHHHHHHCHHH-HCGGGGSSSHHHHHHHHHHHHHHHHHCT--TCEECC
T ss_pred HHHHHHHHHhc--CCCcCCHHHHHHHHHHHHHHHHHHhcCccc-chHHHcCCcHHHHHHHHHHHHHHHhCCC--cccccc
Confidence 99999999999 899999999999999999999999999999 5899999999999999999999999876 999999
Q ss_pred cccccCCchhhHHHHHhhCChhhhcccccCCCCCcccchhHHHHHHHHHHHhhcCCCCCC------C-------------
Q 003263 709 PIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSK------H------------- 769 (835)
Q Consensus 709 PVhqDGSCNGLQHyAALgrD~~Ga~~VNLipsd~PqDVYs~Va~~V~~~i~~da~~d~~~------~------------- 769 (835)
||||||||||||||||||||.+||++|||+|+|+|||||+.||+.|.+.+++|+.+|.+. +
T Consensus 533 PVhqDgSCnGLQHyAALgrD~~ga~~VNL~psd~PqDvYs~Va~~v~~~~~~da~~g~~~~~~~~~d~~~g~i~e~~~~~ 612 (883)
T 1msw_D 533 PLAFDGSCSGIQHFSAMLRDEVGGRAVNLLPSETVQDIYGIVAKKVNEILQADAINGTDNEVVTVTDENTGEISEKVKLG 612 (883)
T ss_dssp CEEEECSCHHHHHHHHHHTCTTHHHHTTCSCCSSCCCHHHHHHHHHHHHHHHHHTTSCCCCCCCSSSSSSCCSSCCCCCC
T ss_pred ccccCCCCcHHHHHHHHhcChhhhhHhCCCCCCCCcchHHHHHHHHHHHHHHHHhcccccccccccccccccchhhcccc
Confidence 999999999999999999999999999999999999999999999999999998765321 0
Q ss_pred cHHHHHHHcccCCCcccccccccccccccchhhHHHHHHHHHhhCCCCCCh----HHHHHhhhhhhhcc
Q 003263 770 PQALLAKILIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDD----RQLFAAACYAAKVS 834 (835)
Q Consensus 770 ~~~~~ak~l~~~I~RKvVKqtVMT~vYGvT~~Gar~QI~~~L~e~g~i~d~----~~~~~aa~Ylak~t 834 (835)
.....+++|.++|+||+|||||||+|||||++|+++||+++|+++++..++ .....+|+|||++|
T Consensus 613 ~~~l~~~~l~~~i~RKvvKqtVMT~vYGvT~~Ga~~qI~~~l~~~~~~~~~~~~~~~~~~~a~yla~~i 681 (883)
T 1msw_D 613 TKALAGQWLAYGVTRSVTKRSVMTLAYGSKEFGFRQQVLEDTIQPAIDSGKGLMFTQPNQAAGYMAKLI 681 (883)
T ss_dssp HHHHHHHHHTTCCCHHHHHHHHHGGGGTCCHHHHHHHHHHHTHHHHHHTSCCCSCSSHHHHHHHHHHHH
T ss_pred hhHHHHHHHhcCCCHHHhccceeeeeeCCcchhhHHHHHHHHhhhhccccccccccchhHHHHHHHHHH
Confidence 112346788899999999999999999999999999999999985332111 12358999999976
No 2
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=100.00 E-value=2.7e-139 Score=1246.58 Aligned_cols=612 Identities=32% Similarity=0.551 Sum_probs=483.0
Q ss_pred hHHHHHHHHHHHHHHHHHH------HH------HHHHHHHHHHHHHHHcccCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Q 003263 171 KKRKFNLLRRRQVKQETEA------WE------RMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQ 238 (835)
Q Consensus 171 ~~~~~~~l~~RQ~~LE~~a------~~------~a~~r~r~~~~~~~~~g~a~~~~~~~~ll~~w~~~L~~~I~~e~~~~ 238 (835)
+....+.+.+.|+.+|..+ ++ ..+.++|+. +.++..+|...|..+|+++....
T Consensus 296 ~~~~L~~~~~~Ql~~E~~~~v~v~sve~~~~~t~~~~~~r~~---------------l~~~~~~w~~~l~~~~~~~~~~~ 360 (1134)
T 3spa_A 296 PLKTLQCLFEKQLHMELASRVCVVSVEKPTLPSKEVKHARKT---------------LKTLRDQWEKALCRALRETKNRL 360 (1134)
T ss_dssp CHHHHHHHHHHHHHHHHHCEEEEECCSCCCCCCTTHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCeeEEeecccCCCCCHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456777888999999762 11 122244444 45567889999999999877654
Q ss_pred H--hccCccchhhhhccCChhHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q 003263 239 R--TKKQKAAYAPHIELLPADKVAVIVMHKMMGLVMAGHEDRCVQVVQAAVHIGMAIEQEIRIHSFLEKTKNYKRKKIIA 316 (835)
Q Consensus 239 ~--~~~~r~~y~p~L~~l~~e~lA~Iti~~~l~~~~~~~~~~~v~~~~la~~IG~aVe~E~~~~~~~~k~kk~~~~~~~~ 316 (835)
. ....+..++|||+.|+.+.++.|.|.++..+..+ |..++.++..||..|++++.+++-....
T Consensus 361 ~~~~~~~~~~~~p~l~~l~~~~~~~~~~~~~~~l~~~-----g~~~~~~~~~lg~~~~~~~~~~~~~~~~---------- 425 (1134)
T 3spa_A 361 EREVYEGRFSLYPFLCLLDEREVVRMLLQVLQALPAQ-----GESFTTLARELSARTFSRHVVQRQRVSG---------- 425 (1134)
T ss_dssp HHHHHTTCCCSTGGGGSSCHHHHHHHHHHHHHHCCTT-----CEEHHHHHHHHHHHHHHHHHHHHHHHHT----------
T ss_pred HHhhccCCCccccceeeCCHHHHHHHHHHHHHHhccc-----CccHHHHHHHHHHHHHHHHHHHHHHhhh----------
Confidence 3 2466888999999999999999777776665433 2458889999999999999876422110
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHh-------HHHHHHHHhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHccccCCCCCCC
Q 003263 317 DTEEVLSKEKELLRKRVNSLIKS-------KRVMEAQKLLKN--EETKPWGRDTQAKLGSRLVELLIETAYVQHPVNPAD 387 (835)
Q Consensus 317 ~~~~~~~k~~~~l~k~~~~~~k~-------~~~~~~~~~~~~--~~~~~W~~~~~~kvG~~Ll~~L~e~~~i~~~~~~~~ 387 (835)
.+.+..+.+.+...-+... .....|+.+... ..+.+|+..++++||++|+++|+++++|.+...+ .
T Consensus 426 ----~~~~~~~~y~~y~~~~~~~~~~~~~~~~r~~w~~l~~~~~~~~~~W~~~~~~kvG~~Ll~~L~~~~~i~~~~~~-~ 500 (1134)
T 3spa_A 426 ----QVQALQNHYRKYLCLLASDAEVPEPCLPRQYWEALGAPEALREQPWPLPVQMELGKLLAEMLVQATQMPCSLDK-P 500 (1134)
T ss_dssp ----HHHHHHHHHHHHGGGTCSSCCCSSCCCHHHHHHHHHCCCCGGGCCCCHHHHHHHHHHHHHHHHHHCBCCC------
T ss_pred ----HHHHHHHHHHHHHHHHhcCCccCCCCChHHHHHHhCCcccCCCCCCCHHHHHHHHHHHHHHHHhhccCCccccC-C
Confidence 0111112222221111100 011235544443 4578999999999999999999999999876554 3
Q ss_pred CCCCCccCceeEEeEeeecCCCCccceeEEEEEcCHHHHHHHHhhhhc---ccCCCCceeeCCCCCcCCCCcccccCCcc
Q 003263 388 YSPPDVRPAFRHRFKTILKHPGQKTTKRYGVVECDPLVLEGLDRSAKH---MLIPYVPMLVPPKKWKGYNKGGYLFLPSY 464 (835)
Q Consensus 388 ~~~~~~~paF~h~~~~~~~~~g~~~~k~~gvi~~~~~~~~~l~~~~~~---~~~~~LPMlvPPkpW~~~~~GGYL~~~~~ 464 (835)
++....+|||+|.|++. + ++++|+|++||.+++.+++.... +.+.+|||||||+||+++++||||+.++.
T Consensus 501 ~~~~~~~paf~h~y~~~---~----~~~~G~i~~hp~~~~~l~~~~~~~~~~~~~~lPMlvpP~pW~~~~~GGYl~~~t~ 573 (1134)
T 3spa_A 501 HRSSRLVPVLYHVYSFR---N----VQQIGILKPHPAYVQLLEKAAEPTLTFEAVDVPMLCPPLPWTSPHSGAFLLSPTK 573 (1134)
T ss_dssp ------CBSEEEEEC-----------CCCEEEEECHHHHHHHHHHTCSEEEEEGGGSCBSSCCEEEEETTEEESSSSCCC
T ss_pred CCCcccccceEEEEEEE---c----CcEEEEEEECHHHHHHHHhccccccccCcCCCCcccCCCCCCCCCCceeEecCcc
Confidence 34567899999999764 3 35799999999999999865432 33459999999999999999999999999
Q ss_pred ceecCCcHHHH-HHHHhccccchHHHHHHHHhhcCcceEEcHHHHHHHHHHHHc-CCCCCCCCCCC-CCCCCC---CCCC
Q 003263 465 VMRTHGSRKQQ-EALKSVTGNCMKKVFEALDTLGSTKWRVNKQVLSVLESIWVS-GGNIAGLVDRN-DVLIPE---KPLS 538 (835)
Q Consensus 465 ~~R~~~~~~q~-~~lk~~~~~~l~~v~~aLN~Lqst~WrIN~~VL~vi~~~w~~-g~~i~~l~~~~-~~p~P~---~p~~ 538 (835)
+||+++...|. ..+++..+++|+.||+|||+||+|||+||++||+|+.++|++ |+++.++|+.. +.|.|+ .|.+
T Consensus 574 ~mR~~~~~~q~~~~l~~~~~~~l~~v~~aLN~Lg~t~W~IN~~VLdVv~~vw~~~G~~~~~iP~~~~~~p~~p~~~~~~~ 653 (1134)
T 3spa_A 574 LMRTVEGATQHQELLETCPPTALHGALDALTQLGNCAWRVNGRVLDLVLQLFQAKGCPQLGVPAPPSEAPQPPEAHLPHS 653 (1134)
T ss_dssp SBCCCTTHHHHHHHHHSSCGGGGHHHHHHHHHHHTCEEEECHHHHHHHHHHHTTTCBGGGTBCCCC--------------
T ss_pred eeecCCChHHHHHHHHhccccccHHHHHHHHHHhCCCcEecHHHHHHHHHHHHhcCCCcCCCCCCccccCCCCCCCCCCC
Confidence 99997655444 445556678999999999999999999999999999999986 55778888753 344444 2345
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHhcCCCceeeccccCCCCccccCCCCCCCCCchhhhhhhhcc
Q 003263 539 EDMTEVQKWKWSVRKAKKINQERHSQRCDTELKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFA 618 (835)
Q Consensus 539 ~d~~~~~~wk~~~~~~~~~~~~~~S~R~~~~~~L~iA~~f~~~~~fYfPhnlDFRGR~YP~~~~Ln~qGsDl~RsLL~Fa 618 (835)
.++++.++|++++++.++.++++||+||+++++|+||++|+|+ .||||||+|||||+||+||||||||+|+|||||+||
T Consensus 654 ~~~~~~~~~kr~~~~~~~~~~~~~S~Rc~~~~kL~iA~~f~~~-~fYfPhnlDFRGR~Yp~~p~LnhqGsDl~RsLL~Fa 732 (1134)
T 3spa_A 654 AAPARKAELRRELAHCQKVAREMHSLRAEALYRLSLAQHLRDR-VFWLPHNMDFRGRTYPCPPHFNHLGSDVARALLEFA 732 (1134)
T ss_dssp --------------------CTHHHHHHHHHHHHHHHHHHTTS-CEECCEEECTTCCEEESCSSSCSCSSHHHHHTEEES
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCC-eeecccccCCCCcCcCCCCCcCcccchHHHHHHHhc
Confidence 5677888999999988889999999999999999999999996 999999999999999999999999999999999999
Q ss_pred cCccCCcchhHHHHHHHhhhhcCCCCC-CCHHHHHHHHHHHHHHHHHhccCCCCCchhHhhCCChHHHHHHHHHHHHHHh
Q 003263 619 EGRPLGKSGLRWLKIHLANLFSGGVEK-LSHDGRLAFVENHLYEIFDSAENPINGSRWWLTAEDPFQCLAACINLSEALK 697 (835)
Q Consensus 619 egkpLG~~Gl~WLKIhlANlyG~G~DK-~S~deRi~wv~~n~~~I~dsA~dPL~g~~wW~~AD~PwQfLAaC~El~~al~ 697 (835)
+|+|||++|++|||||+||+| |+|| .||+||++|+++|+++|++||+|||+|.+||++||+||||||+||||++|++
T Consensus 733 egkpLG~~Gl~WLkIhlAN~~--G~dKk~s~~eRi~wv~~n~~~I~dsA~~Pl~g~~wW~~Ad~PwQfLA~C~El~~a~~ 810 (1134)
T 3spa_A 733 QGRPLGPHGLDWLKIHLVNLT--GLKKREPLRKRLAFAEEVMDDILDSADQPLTGRKWWMGAEEPWQTLACCMEVANAVR 810 (1134)
T ss_dssp SCEECTTTHHHHHHHHHHHHH--SCCTTSCHHHHHHHHHHHHHHHHHHHHCTTTSCCGGGGSSSHHHHHHHHHHHHHHHT
T ss_pred cCCcCCcchHHHHHHHHHHhc--CCCcCCCHHHHHHHHHHHHHHHHHHHhCcccchhHHHhCCCHHHHHHHHHHHHHHHh
Confidence 999999999999999999999 7998 7999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcccccccccccCCchhhHHHHHhhCChhhhcccccCCCCCcccchhHHHHHHHHHHHhhcCCCCCCCcHHHHHHH
Q 003263 698 SSSPHSVISHLPIHQDGSCNGLQHYAALGRNTLEAAAVNLVAGEKPADVYSEIAVRVHEIMKRDSNKDPSKHPQALLAKI 777 (835)
Q Consensus 698 s~dP~~y~S~lPVhqDGSCNGLQHyAALgrD~~Ga~~VNLipsd~PqDVYs~Va~~V~~~i~~da~~d~~~~~~~~~ak~ 777 (835)
++||++|+|||||||||||||||||||||||.+||++|||+|+|+|||||+.||+.|++.+++|++++. .+|++
T Consensus 811 ~~dp~~y~S~lPVhqDGSCNGLQHyAALgrD~~Ga~~VNL~psd~PqDvYs~Va~~V~~~~~~Da~~~~------~~a~~ 884 (1134)
T 3spa_A 811 ASDPAAYVSHLPVHQDGSCNGLQHYAALGRDSVGAASVNLEPSDVPQDVYSGVAAQVEVFRRQDAQRGM------RVAQV 884 (1134)
T ss_dssp SSSGGGCEECCEEEECCSSHHHHHHHHHTTCHHHHHHTTCSCCSSCCCHHHHHHHHHHHHHHHHHHTTC------HHHHH
T ss_pred cCCCccccccCccccCCCCcHHHHHHHHccChhhHHHhCCCCCCCcccHHHHHHHHHHHHHHhhhhcCh------HHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999987763 68999
Q ss_pred cccCCCcccccccccccccccchhhHHHHHHHHHhhCCCCCChHHHHHhhhhhhhcc
Q 003263 778 LIDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRLEEKGHITDDRQLFAAACYAAKVS 834 (835)
Q Consensus 778 l~~~I~RKvVKqtVMT~vYGvT~~Gar~QI~~~L~e~g~i~d~~~~~~aa~Ylak~t 834 (835)
|.+.|+||+|||||||+|||||++|+++||.++|++.+.++++ .+|++|+|||++|
T Consensus 885 l~~~I~RKvVKqtVMT~vYGvT~~Gar~QI~~~L~e~~~~~~~-~~~~~a~Yla~~i 940 (1134)
T 3spa_A 885 LEGFITRKVVKQTVMTVVYGVTRYGGRLQIEKRLRELSDFPQE-FVWEASHYLVRQV 940 (1134)
T ss_dssp TTTCCCHHHHHHHHHHHHHCCSSSHHHHHHHHHHHTCTTSCTT-THHHHHHHHHHHH
T ss_pred hhCCCChhhcccceEEeeecceehhHHHHHHHHHHhcccCchH-HHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998777765 6899999999875
No 3
>3q23_A Virion RNA polymerase; protein-DNA complex; HET: DNA G2P; 1.80A {Enterobacteria phage N4} PDB: 3q0a_A* 3q22_A* 4ff1_A 4ff2_A* 4ff3_A* 4ff4_A* 3q24_A* 3c3l_A 3c46_A 3c2p_A* 2po4_A
Probab=97.74 E-value=0.00012 Score=86.25 Aligned_cols=306 Identities=15% Similarity=0.169 Sum_probs=178.7
Q ss_pred HHHHHHHHhhcCcceEEcHHHHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhh
Q 003263 487 KKVFEALDTLGSTKWRVNKQVLSVLESIWVSG-GNIAGLVDRNDVLIPEKPLSEDMTEVQKWKWSVRKAKKINQERHSQR 565 (835)
Q Consensus 487 ~~v~~aLN~Lqst~WrIN~~VL~vi~~~w~~g-~~i~~l~~~~~~p~P~~p~~~d~~~~~~wk~~~~~~~~~~~~~~S~R 565 (835)
+.+-.+|...|.+|++||..+..+...+=+.+ ..+.|. .++..|. -..+..+ ++ .- +..+.+
T Consensus 338 ~lqakalkkaQ~q~hrvn~~m~~~~e~LgEDalltmlGa---~~l~~e~----ln~~~Rk----Sl---EG---KN~sV~ 400 (1118)
T 3q23_A 338 PEQKAALKAEQATEFYVHTPMVQFYETLGKDRILELMGA---GTLNKEL----LNDNHAK----SL---EG---KNRSVE 400 (1118)
T ss_dssp HHHHHHHHHHHHCCBEECHHHHHHHHHHHHHHHHHHHSC---CSCCTTS----SCHHHHH----HH---HH---HHHHHH
T ss_pred HHHHHHHHHhhccCceecccHHHHHHHhchhHHHHHhCc---ccccccc----cchhHHh----hh---hc---ccHHHH
Confidence 44567788999999999999999976664432 122222 1111121 1111111 11 11 111122
Q ss_pred hhhh-------HHHHHHHHhcCCCceeeccccCCCCccccCCCCCCCCCchhhhhhhhcccCc-cCC---cchhHHHHHH
Q 003263 566 CDTE-------LKLSVARRMKDEEGFYYPHNLDFRGRAYPMHPHLNHLSSDVCRGVLEFAEGR-PLG---KSGLRWLKIH 634 (835)
Q Consensus 566 ~~~~-------~~L~iA~~f~~~~~fYfPhnlDFRGR~YP~~~~Ln~qGsDl~RsLL~Faegk-pLG---~~Gl~WLKIh 634 (835)
.++. ..-+++... +.-.+|||++|+-=||.=-. .-+|||.+=|.|-++.=.+.. .|+ ...++-|+.+
T Consensus 401 rdi~~~~d~iN~i~e~~~~~-~~vpIyf~y~mtrVGR~qm~-g~~NPQSsKLhRemv~pt~StV~L~~~N~~dm~~FqLg 478 (1118)
T 3q23_A 401 DSYNQLFSVIEQVRAQSEDI-STVPIHYAYNMTRVGRMQML-GKYNPQSAKLVREAILPTKATLDLSNQNNEDFSAFQLG 478 (1118)
T ss_dssp HHHHHHHHHHHHHHHHCSCG-GGCCEECCEEECTTSCEEES-SSSSTTTCHHHHTTEESCCEEECCSSTTSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccc-ccCceeeeechhhhhhhhhc-CCCCchhHHHHHHHhcCCceEeecCCCCHHHHHHHHHH
Confidence 1211 111222211 11279999999655555433 678999999999998765532 355 4468888888
Q ss_pred HhhhhcCCCCCCCHHHHHHHHHH-----------HHHHHHHhccCCCCC---chhHhhCCChHHHHHHHHHHHHHHhcCC
Q 003263 635 LANLFSGGVEKLSHDGRLAFVEN-----------HLYEIFDSAENPING---SRWWLTAEDPFQCLAACINLSEALKSSS 700 (835)
Q Consensus 635 lANlyG~G~DK~S~deRi~wv~~-----------n~~~I~dsA~dPL~g---~~wW~~AD~PwQfLAaC~El~~al~s~d 700 (835)
+|--+|=.+||.+-++-++=+.+ -+.+|+....-|-.. ..=-+.+++||-.+-+-+|++.++...+
T Consensus 479 vaQslGiKVeK~~~e~~~~~~~~~l~t~lkpaVdmm~eiLt~G~~d~~~~dtl~~alg~~k~fvaamA~~e~Ary~la~G 558 (1118)
T 3q23_A 479 LAQALDIKVHTMTREVMSDELTKLLEGNLKPAIDMMVEFNTTGSLPENAVDVLNTALGDRKSFVALMALMEYSRYLVAED 558 (1118)
T ss_dssp HHHHTTCCGGGSCHHHHHHHHHHHHHTTTHHHHHHHHHHHHHSCCCTTHHHHHHHHHGGGCSHHHHHHHHHHHHHHHCSC
T ss_pred HHHHcCcchhcccHHHHHHHHHHHhcccccHHHHHHHHHhccCCCChhHHHHHHHHhcCCchHHHHHHHHHHHHHHHhcC
Confidence 99989766788887665544433 233444433322110 0012678999655448999999887655
Q ss_pred CCcccccccccccCCchhhHHHHHh-hCChh----------h-------hcccccCCC-CCcccchhHHHHHHHHHHHhh
Q 003263 701 PHSVISHLPIHQDGSCNGLQHYAAL-GRNTL----------E-------AAAVNLVAG-EKPADVYSEIAVRVHEIMKRD 761 (835)
Q Consensus 701 P~~y~S~lPVhqDGSCNGLQHyAAL-grD~~----------G-------a~~VNLips-d~PqDVYs~Va~~V~~~i~~d 761 (835)
-+.|.+.|-+-.||--||==..=-+ |.-.. | |+.+|=.-+ ..--|.|..+++.+...+...
T Consensus 559 ~asF~T~L~~ElDGVTNGP~Namv~~G~g~~t~~~~~nl~KgG~F~G~~g~t~N~~~~~~~n~DLYE~ts~~l~~aLg~~ 638 (1118)
T 3q23_A 559 KSAFVTPLYVEADGVTNGPINAMMLMTGGLFTPDWIRNIAKGGLFIGSPNKTMNEHRSTADNNDLYQASTNALMESLGKL 638 (1118)
T ss_dssp GGGEEECCEEEEEETTHHHHHHHHHHCCSCCCHHHHHHHHTTTEEESCTTCCHHHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred CccceeeeEEEecCccccHHHHHHHhcCCcCCHHHHHHhhccceeecCCCchhhhhhcccCCchHHHHHHHHHHHHHHHh
Confidence 5799999999999999995432222 22111 1 123332211 123699999999999988755
Q ss_pred cCCCCCCCc------HH-HHHHHc----------ccCCCcccccccccccccccchhhHHHHHHHHH
Q 003263 762 SNKDPSKHP------QA-LLAKIL----------IDQVDRKLVKQTVMTSVYGVTFVGAREQIKRRL 811 (835)
Q Consensus 762 a~~d~~~~~------~~-~~ak~l----------~~~I~RKvVKqtVMT~vYGvT~~Gar~QI~~~L 811 (835)
..+=..+.+ .. .++..+ .-.++|++.|.++=..+||+...|+..-|.+.+
T Consensus 639 ~~~~~~n~Pwq~q~~~l~sl~s~f~gd~~~~Eng~~~l~R~~aKnPlT~~~YGSg~rgia~gva~~~ 705 (1118)
T 3q23_A 639 RSNYASNMPIQSQIDSLLSLMDLFLPDINLGENGALELKRGIAKNPLTITIYGSGARGIAGKLVSSV 705 (1118)
T ss_dssp HHTTTTCHHHHHHHHHHHHHHHHHCTTEEECTTCCEEECTHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred hhhcccCCchHHHHHHHHHHHHHhhcccccCCCcchhhhhhhhhCCceeeeecCchHHHHHHHHHHH
Confidence 311111111 00 112222 126899999999999999998887766555433
No 4
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=14.91 E-value=55 Score=29.24 Aligned_cols=36 Identities=11% Similarity=0.124 Sum_probs=25.4
Q ss_pred HHHHHHhcCCCCcccccccccccCCchh----hHHHHHhh
Q 003263 691 NLSEALKSSSPHSVISHLPIHQDGSCNG----LQHYAALG 726 (835)
Q Consensus 691 El~~al~s~dP~~y~S~lPVhqDGSCNG----LQHyAALg 726 (835)
++.+.++.-+|+..+-++|.++|||-+- .++|+..+
T Consensus 42 ~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L 81 (98)
T 1iv0_A 42 ALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEAL 81 (98)
T ss_dssp HHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHH
Confidence 3444444446899999999999999654 34666554
No 5
>1d2v_A Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_A* 1d5l_A* 1d7w_A* 1dnu_A* 1dnw_A* 4dl1_A* 3zs1_A* 3f9p_A* 1mhl_A* 1myp_A* 3zs0_A*
Probab=11.72 E-value=41 Score=30.41 Aligned_cols=11 Identities=27% Similarity=0.540 Sum_probs=9.7
Q ss_pred cccCCchhhHH
Q 003263 711 HQDGSCNGLQH 721 (835)
Q Consensus 711 hqDGSCNGLQH 721 (835)
..|||||-|+|
T Consensus 9 t~DG~cNNl~~ 19 (104)
T 1d2v_A 9 TITGMCNNRRS 19 (104)
T ss_dssp CSSCTTSSSSS
T ss_pred CCCCCccCCCC
Confidence 36999999997
No 6
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=11.38 E-value=65 Score=30.54 Aligned_cols=34 Identities=26% Similarity=0.418 Sum_probs=23.4
Q ss_pred HHHhcCCCCcccccccccccCCch----hhHHHHHhhC
Q 003263 694 EALKSSSPHSVISHLPIHQDGSCN----GLQHYAALGR 727 (835)
Q Consensus 694 ~al~s~dP~~y~S~lPVhqDGSCN----GLQHyAALgr 727 (835)
+.++.-+|+..+-++|.++|||-+ -.++|+..+.
T Consensus 47 ~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~ 84 (138)
T 1nu0_A 47 RLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIH 84 (138)
T ss_dssp HHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHH
Confidence 333333689999999999999865 2345555543
No 7
>1nov_D Nodamura virus coat proteins; insect virus, icosahedral VIRU; 3.50A {Nodamura virus}
Probab=10.16 E-value=67 Score=25.09 Aligned_cols=34 Identities=18% Similarity=0.134 Sum_probs=26.4
Q ss_pred HHHHhcCCCCcccccccccccCCchhhHHHHHhhCC
Q 003263 693 SEALKSSSPHSVISHLPIHQDGSCNGLQHYAALGRN 728 (835)
Q Consensus 693 ~~al~s~dP~~y~S~lPVhqDGSCNGLQHyAALgrD 728 (835)
+..++++ ..+.|.+|=..-...+|+||+++|..+
T Consensus 8 k~ilks~--l~~aS~iPGPVG~~asGi~gl~~l~~~ 41 (44)
T 1nov_D 8 RSILKSG--LNFASTIPGPVGVAATGIKGIIETIGS 41 (44)
T ss_pred HHHHHHH--HHHHhcCCCchhHHHHhHHHHHHHHHH
Confidence 3344544 567888998888999999999998765
No 8
>3bhw_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.50A {Magnetospirillum magneticum}
Probab=9.84 E-value=2.2e+02 Score=28.63 Aligned_cols=29 Identities=24% Similarity=0.473 Sum_probs=22.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHcccc
Q 003263 352 EETKPWGRDTQAKLGSRLVELLIETAYVQ 380 (835)
Q Consensus 352 ~~~~~W~~~~~~kvG~~Ll~~L~e~~~i~ 380 (835)
+....|+..++-|+++.+..+|.|++++.
T Consensus 137 ~~v~~wSdsT~kKl~q~~~~~L~eaGlL~ 165 (209)
T 3bhw_A 137 PLMPVWQDSTANKLADCVYRILVEVGYIT 165 (209)
T ss_dssp TTC----CHHHHHHHHHHHHHHHHHTCCC
T ss_pred CcccccCHHHHHHHHHHHHHHHHHcCCcC
Confidence 45678999999999999999999999875
No 9
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=9.48 E-value=2.8e+02 Score=25.63 Aligned_cols=55 Identities=9% Similarity=0.108 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHcccCCCChhHHHHHHHHHHH
Q 003263 172 KRKFNLLRRRQVKQETEAWER---MVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGP 226 (835)
Q Consensus 172 ~~~~~~l~~RQ~~LE~~a~~~---a~~r~r~~~~~~~~~g~a~~~~~~~~ll~~w~~~ 226 (835)
...+....+|+..+..+.|+. ....+.+.+..+...|..++.+-++.++..|...
T Consensus 32 ~~~~~~~~~~~~~~~~e~~~~~~~~~~~l~~~l~~~~~~g~~p~s~eaq~l~~~h~~~ 89 (143)
T 1ny9_A 32 TDAYRQSKEKTASYTKEDWQRIQDEADELTRRFVALMDAGEPADSEGAMDAAEDHRQG 89 (143)
T ss_dssp ------------------CCCTTHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
Confidence 444555556666666655542 2344444555556677778888899888888763
No 10
>4ev0_A Transcription regulator, CRP family; CAMP binding, winged helix-turn-helix motif, DNA binding, transcription activator; HET: CMP; 2.40A {Thermus thermophilus}
Probab=8.44 E-value=8.9e+02 Score=22.39 Aligned_cols=81 Identities=12% Similarity=0.087 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccCccchhhhhccCChhHHHH
Q 003263 182 QVKQETEAWERMVDEYKELEAKMIEKRLAPNLPHIKGLFLGWFGPLSEAIEREQKMQRTKKQKAAYAPHIELLPADKVAV 261 (835)
Q Consensus 182 Q~~LE~~a~~~a~~r~r~~~~~~~~~g~a~~~~~~~~ll~~w~~~L~~~I~~e~~~~~~~~~r~~y~p~L~~l~~e~lA~ 261 (835)
+.+++.-....+.+|+...+.++.+.|.....+..+.-+.+.+.-=.+.+...+.+.++.|--..-+..+..++++.|..
T Consensus 131 ~~~~~~~~~~~~~~Rl~~~L~~~~~~~~~~~~~~t~~~lA~~lg~sr~tvsR~l~~l~~~g~I~~~~~~i~i~d~~~L~~ 210 (216)
T 4ev0_A 131 DLELDLLSFEEARNRVAYALLKLLRQGLGPLFQIRHHELAALAGTSRETVSRVLHALAEEGVVRLGPGTVEVREAALLEE 210 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEETTEEEESCHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHhhcCCccCCCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEecCCEEEEeCHHHHHH
Confidence 33444455566778888888777766644445555666666664444455555555554443222335577778887765
Q ss_pred H
Q 003263 262 I 262 (835)
Q Consensus 262 I 262 (835)
+
T Consensus 211 ~ 211 (216)
T 4ev0_A 211 I 211 (216)
T ss_dssp H
T ss_pred H
Confidence 4
Done!