BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003266
(835 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P83436|COG7_HUMAN Conserved oligomeric Golgi complex subunit 7 OS=Homo sapiens
GN=COG7 PE=1 SV=1
Length = 770
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 204/840 (24%), Positives = 360/840 (42%), Gaps = 132/840 (15%)
Query: 3 LDLGPFSDEKFDPKKWINSACQTRHSQDS---LDNHLVDLEMKLQMVSEEISASLEEQSA 59
+D F + FD K+WIN+A + + + D H L MKLQ+ +E++ ++EE S
Sbjct: 1 MDFSKFLADDFDVKEWINAAFRAGSKEAASGKADGHAATLVMKLQLFIQEVNHAVEETSH 60
Query: 60 SALLRVPRATRDVVRLRDDAISLRGSVSGILQKLKKAEGSSAESIAALSKVDTVKQRMEA 119
AL +P+ RDV L+ +A L+ + + + +KK E +++S+ L ++D VK RM+
Sbjct: 61 QALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQL 120
Query: 120 AYETLQDAAGLTQLSLTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVL 179
A E+LQ+A + LS +E+ F + D+ + L M++ L + + +++ LE L
Sbjct: 121 AAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEAL 180
Query: 180 EDRLDAMVQPRLTDALSNRKIDIARDLRGILIRIGRFKSLELHYTKVHLKYIKQLWEEFE 239
++RL+A+ P++ A +++ +D ++ + I R L +Y K H + W+E
Sbjct: 181 KNRLEALASPQIVAAFTSQAVDQSKVFVKVFTEIDRMPQLLAYYYKCHKVQLLAAWQELC 240
Query: 240 SRQRSSKIANEKNEVERISSNNEFQSSAPSVMFSSWLPSFYDELLLYLEQEWKWCMVAFP 299
S L YD LL + +W F
Sbjct: 241 QSDLS---------------------------LDRQLTGLYDALLGAWHTQIQWATQVFQ 273
Query: 300 DDYRTLVPKLLVETMASVGGSFVSRINLATGDFVPETKALSKGILDILSGDMPKGIKLQT 359
+ +V LL++T+ ++ S S ++ PE
Sbjct: 274 KPHE-VVMVLLIQTLGALMPSLPSCLSNGVERAGPE------------------------ 308
Query: 360 KHLEALIDLHNMTGTFARNIQ-----HLFSESDLQVLLDTLKAVYFPYDTFKQRYGQMER 414
+ L L++ ++ T FA+ ++ HL E +L + + + AVY PY ++ +YG ME
Sbjct: 309 QELTRLLEFYDATAHFAKGLEMALLPHL-HEHNLVKVTELVDAVYDPYKPYQLKYGDMEE 367
Query: 415 AILSSEIAGVDLRGAVTRGIGAQGIELSETVRRMEESIPQVIVLLEAAVERCISFTGGSE 474
+ L +++ V L E+ + V+ + S+ ++ L AAV+RC+ FT G
Sbjct: 368 SNLLIQMSAVPLEHG----------EVIDCVQELSHSVNKLFGLASAAVDRCVRFTNGLG 417
Query: 475 ADELILALDDIMLQYISTLQELLKSLRAVCGVDHDGVGSKKEVGFDKKEGVSNARKADIS 534
L+ AL + +Y+S L+S+R C +DH S
Sbjct: 418 TCGLLSALKSLFAKYVSDFTSTLQSIRKKCKLDHIPPNSL-------------------- 457
Query: 535 SEEEWSIVQGALQILTVADCLTSRSSVFEASLRATL-----ARLSTSL---SLSVFGSSL 586
+E+W+ Q +++I+ L FE L + LS S SL+ F S+
Sbjct: 458 FQEDWTAFQNSIRIIATCGELLRHCGDFEQQLANRILSTAGKYLSDSCSPRSLAGFQESI 517
Query: 587 --DQKQSQSANVDGHGELSVGGRAALDVAAVRLIDVPEKARKLFNLLDQSKDPRFHALPL 644
D+K S + L A L + EK NLL A P
Sbjct: 518 LTDKKNSAKNPWQEYNYLQKDNPAEYASLMEILYTLKEKGSSNHNLL---------AAPR 568
Query: 645 ASQRVAAFADAVNELVYDVLISKVRQRLSDVSRLPIWSS--VEEQSAFHLPTFSAYPQTY 702
A+ + ++L +D + +++Q+L +S++ W++ + E LP FS P Y
Sbjct: 569 AA--LTRLNQQAHQLAFDSVFLRIKQQLLLISKMDSWNTAGIGETLTDELPAFSLTPLEY 626
Query: 703 VTSVGEYLLTLPQQLEPLAEGISTS-----------------DNNDEAQFFATEWMFKVA 745
++++G+Y+++LP LEP ++ D E A W+ +A
Sbjct: 627 ISNIGQYIMSLPLNLEPFVTQEDSALELALHAGKLPFPPEQGDELPELDNMADNWLGSIA 686
Query: 746 EGASALYMEQLRGIQYITDHGAQQLSVDIEYLSNVLSALSVPIPPALATFHTCLST-PRD 804
Y + + I ++ H A+QL+ DI+YL NV+ AL + L T L T P D
Sbjct: 687 RATMQTYCDAILQIPELSPHSAKQLATDIDYLINVMDALGLQPSRTLQHIVTLLKTRPED 746
>sp|Q3UM29|COG7_MOUSE Conserved oligomeric Golgi complex subunit 7 OS=Mus musculus
GN=Cog7 PE=2 SV=1
Length = 770
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 202/821 (24%), Positives = 354/821 (43%), Gaps = 131/821 (15%)
Query: 3 LDLGPFSDEKFDPKKWINSACQTRHSQDSL---DNHLVDLEMKLQMVSEEISASLEEQSA 59
+D F + FD K WIN+A + + D H L MKLQ+ +E++ ++EE S
Sbjct: 1 MDFSKFLADDFDVKDWINAAFRAGPKDGAAGKADGHAATLVMKLQLFIQEVNHAVEETSL 60
Query: 60 SALLRVPRATRDVVRLRDDAISLRGSVSGILQKLKKAEGSSAESIAALSKVDTVKQRMEA 119
AL +P+ RDV L+ +A L+ + + + +KK E +++S+ L ++D VK RM+
Sbjct: 61 QALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQL 120
Query: 120 AYETLQDAAGLTQLSLTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVL 179
A E+LQ+A + LS +E+ F + D+ + L M++ L + + +++ LE L
Sbjct: 121 AAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEAL 180
Query: 180 EDRLDAMVQPRLTDALSNRKIDIARDLRGILIRIGRFKSLELHYTKVHLKYIKQLWEEFE 239
++RL+A+ P++ A +++ +D ++ + I R L +Y K H + W+E
Sbjct: 181 KNRLEALASPQIVAAFTSQSVDQSKVFVKVFTEIDRMPQLLAYYYKCHKVQLLATWQEL- 239
Query: 240 SRQRSSKIANEKNEVERISSNNEFQSSAPSVMFSSWLPSFYDELLLYLEQEWKWCMVAFP 299
QS P L YD LL + +W F
Sbjct: 240 -----------------------CQSDLP---LDRQLTGLYDALLGAWHTQTQWATQVFK 273
Query: 300 DDYRTLVPKLLVETMASVGGSFVSRINLATGDFVPETKALSKGILDILSGDMPKGIKLQT 359
+ + +V LL++T+ ++ S ++ A PE +
Sbjct: 274 NPHE-VVTVLLIQTLGALVPSLPMCLSAAVERAGPELE---------------------- 310
Query: 360 KHLEALIDLHNMTGTFARNIQ-----HLFSESDLQVLLDTLKAVYFPYDTFKQRYGQMER 414
L L++ ++ T FA+ ++ HL + +L +++ + AVY PY F+ +YG ME
Sbjct: 311 --LTRLLEFYDTTAHFAKGLEMALLPHL-QDHNLVKVVELVDAVYGPYKPFQLKYGDMEE 367
Query: 415 AILSSEIAGVDLRGAVTRGIGAQGIELSETVRRMEESIPQVIVLLEAAVERCISFTGGSE 474
L +I+ V L E+ + V+ + S+ ++ L AAV+RC FT G
Sbjct: 368 NNLLIQISAVPLEHG----------EVIDCVQELSHSVHKLFGLASAAVDRCAKFTNGLG 417
Query: 475 ADELILALDDIMLQYISTLQELLKSLRAVCGVDHDGVGSKKEVGFDKKEGVSNARKADIS 534
L+ AL + +Y+S L+S+R C +D S
Sbjct: 418 TCGLLTALKSLFAKYVSHFTNALQSIRKKCKLDDIPPNSL-------------------- 457
Query: 535 SEEEWSIVQGALQILTVADCLTSRSSVFEASLRATL-----ARLSTSL---SLSVFGSSL 586
+E+W+ Q +++I+ L + FE L + LS S SL+ F S+
Sbjct: 458 FQEDWTAFQNSVRIIATCGELLRQCGDFEQQLANRILSTAGKYLSDSYSPRSLAGFQDSI 517
Query: 587 --DQKQSQSANVDGHGELSVGGRAALDVAAVRLIDVPEKARKLFNLLDQSKDPRFHALPL 644
D+K + L A L + EK NLL S+ AL
Sbjct: 518 LTDKKSPAKNPWQEYNYLQKDNPAEYASLMEILYTLKEKGSSNHNLLSASRT----ALTR 573
Query: 645 ASQRVAAFADAVNELVYDVLISKVRQRLSDVSRLPIWSS--VEEQSAFHLPTFSAYPQTY 702
+Q+ ++L +D + +++Q+L VSR+ W++ + E LP FS P Y
Sbjct: 574 LNQQ-------AHQLAFDSVFLRIKQQLLLVSRMDSWNTAGIGETLTDDLPAFSLTPLEY 626
Query: 703 VTSVGEYLLTLPQQLEPLAEGISTS-----------------DNNDEAQFFATEWMFKVA 745
++++G+Y+++LP LEP ++ D E A W+ +A
Sbjct: 627 ISNIGQYIMSLPLNLEPFVTQEDSALELALHAGKLPFPPEQGDELPELDNMADNWLGSIA 686
Query: 746 EGASALYMEQLRGIQYITDHGAQQLSVDIEYLSNVLSALSV 786
Y + + I +T H +QL+ DI+YL NV+ AL +
Sbjct: 687 RATMQTYCDVILQIPEVTPHSTKQLATDIDYLINVMDALGL 727
>sp|A2VDR8|COG7_BOVIN Conserved oligomeric Golgi complex subunit 7 OS=Bos taurus GN=COG7
PE=2 SV=1
Length = 770
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 202/821 (24%), Positives = 357/821 (43%), Gaps = 131/821 (15%)
Query: 3 LDLGPFSDEKFDPKKWINSACQT---RHSQDSLDNHLVDLEMKLQMVSEEISASLEEQSA 59
+D F E FD K+WIN+A + + D+H L MKLQ+ +E++ ++EE S
Sbjct: 1 MDFSKFLAEDFDVKEWINAAFRAGPKEAAAGKADSHAATLVMKLQLFIQEVNHAVEETSH 60
Query: 60 SALLRVPRATRDVVRLRDDAISLRGSVSGILQKLKKAEGSSAESIAALSKVDTVKQRMEA 119
AL +P+ RDV L+ +A L+ + + + +KK E +++S+ L ++D VK RM+
Sbjct: 61 QALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQL 120
Query: 120 AYETLQDAAGLTQLSLTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVL 179
A E+LQ+A + LS +E+ F + D+ + L M++ L + + +++ LE L
Sbjct: 121 AAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQNSLMMLVDTPDYSEKCVHLEAL 180
Query: 180 EDRLDAMVQPRLTDALSNRKIDIARDLRGILIRIGRFKSLELHYTKVHLKYIKQLWEEFE 239
++RL+A+ P++ A +++ ID ++ + I R L +Y K H + W+E
Sbjct: 181 KNRLEALASPQIVAAFTSQSIDQSKMFVKVFSEIDRMPQLLAYYYKCHKVQLLAAWQEL- 239
Query: 240 SRQRSSKIANEKNEVERISSNNEFQSSAPSVMFSSWLPSFYDELLLYLEQEWKWCMVAFP 299
Q+ P L YD LL + +W F
Sbjct: 240 -----------------------CQTDLP---LDRQLTGLYDALLGAWHAQIQWASQVFK 273
Query: 300 DDYRTLVPKLLVETMASVGGSFVSRINLATGDFVPETKALSKGILDILSGDMPKGIKLQT 359
+ + +V LL++T+ G VP + SG G +L+
Sbjct: 274 NPH-DVVTVLLIQTL---------------GALVPSLPVC------LSSGVERAGPELE- 310
Query: 360 KHLEALIDLHNMTGTFARNIQ-----HLFSESDLQVLLDTLKAVYFPYDTFKQRYGQMER 414
L L++ ++ T FA+ ++ H + E +L +++ + AVY PY ++ +YG ME
Sbjct: 311 --LVKLLEFYDATAHFAKGLEMALLPHAY-EQNLVKVMELVDAVYGPYKPYQLKYGDMEE 367
Query: 415 AILSSEIAGVDLRGAVTRGIGAQGIELSETVRRMEESIPQVIVLLEAAVERCISFTGGSE 474
L + + V L E+ + V+ + S+ ++ L AAV+RCI FT G
Sbjct: 368 KYLLIQFSEVPLEHG----------EVIDCVQELSHSVNKLFGLSSAAVDRCIRFTSGLG 417
Query: 475 ADELILALDDIMLQYISTLQELLKSLRAVCGVDHDGVGSKKEVGFDKKEGVSNARKADIS 534
L+ AL + +Y+S L S+R +D + S
Sbjct: 418 TCGLLTALKSLFAKYVSDFTSTLHSIRKKYRLDDIPLNSL-------------------- 457
Query: 535 SEEEWSIVQGALQILTVADCLTSRSSVFEASLRATL-----ARLSTSL---SLSVFGSSL 586
+E+W+ Q +++I+ L + FE L + LS S SL+ F S+
Sbjct: 458 FQEDWTAFQNSIRIIATCGELLRQCGDFEQQLANRILSTAGKYLSDSFSPRSLTGFQDSI 517
Query: 587 --DQKQSQSANVDGHGELSVGGRAALDVAAVRLIDVPEKARKLFNLLDQSKDPRFHALPL 644
D+K S + L A L + EK +LL S+ AL
Sbjct: 518 LTDKKSSAKNPWQEYNYLQKDSPAEYGSLMEILYTLKEKGSSNHHLLSASRS----ALTR 573
Query: 645 ASQRVAAFADAVNELVYDVLISKVRQRLSDVSRLPIWSS--VEEQSAFHLPTFSAYPQTY 702
+Q+ ++L +D + +++Q+L + ++ W++ + E LPTFS P Y
Sbjct: 574 LNQQ-------AHQLAFDSVFLRIKQQLLLIPKMDSWNTAGIGETLTDDLPTFSLTPLEY 626
Query: 703 VTSVGEYLLTLPQQLEPLAEGISTS-----------------DNNDEAQFFATEWMFKVA 745
++++G+Y+++LP LEP ++ D E A W+ +A
Sbjct: 627 ISNIGQYIMSLPLNLEPFVTQEDSALELALHAGKLPFPPEQGDELPELDNMADNWLGSIA 686
Query: 746 EGASALYMEQLRGIQYITDHGAQQLSVDIEYLSNVLSALSV 786
Y + + I +T H +QL+ DI+YL NV+ AL +
Sbjct: 687 RATMQTYCDAILQIPELTPHSTKQLATDIDYLINVMDALGL 727
>sp|Q3T1G7|COG7_RAT Conserved oligomeric Golgi complex subunit 7 OS=Rattus norvegicus
GN=Cog7 PE=2 SV=1
Length = 770
Score = 213 bits (543), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 203/852 (23%), Positives = 361/852 (42%), Gaps = 143/852 (16%)
Query: 3 LDLGPFSDEKFDPKKWINSACQTRHSQDSL---DNHLVDLEMKLQMVSEEISASLEEQSA 59
+D F + FD K WIN+A + + D H L MKLQ+ +E++ ++EE S
Sbjct: 1 MDFSKFLADDFDVKDWINAAFRAGPKDGAAGKADGHAATLVMKLQLFIQEVNHAVEETSL 60
Query: 60 SALLRVPRATRDVVRLRDDAISLRGSVSGILQKLKKAEGSSAESIAALSKVDTVKQRMEA 119
AL +P+ RDV L+ +A L+ + + + +KK E +++S+ L ++D VK RM+
Sbjct: 61 QALQNMPKVLRDVEALKQEASFLKEQMILVKEDIKKFEQDTSQSMQVLVEIDQVKSRMQL 120
Query: 120 AYETLQDAAGLTQLSLTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVL 179
A E+LQ+A + LS +E+ F + D+ + L M+ L + + +++ LE L
Sbjct: 121 AAESLQEADKWSTLSADIEETFKTQDIAVISAKLTGMQSSLMMLVDTPDYSEKCVHLEAL 180
Query: 180 EDRLDAMVQPRLTDALSNRKIDIARDLRGILIRIGRFKSLELHYTKVHLKYIKQLWEEFE 239
++RL+A+ P++ A +++ +D ++ + I R L +Y K H + W+E
Sbjct: 181 KNRLEALASPQIVAAFTSQSVDQSKVFVKVFTEIDRMPQLLAYYYKCHKVQLLATWQELC 240
Query: 240 SRQRSSKIANEKNEVERISSNNEFQSSAPSVMFSSWLPSFYDELLLYLEQEWKWCMVAFP 299
R + L Y LL + +W F
Sbjct: 241 QR---------------------------DLPLDRQLTGLYHALLGAWHTQTQWATQVFK 273
Query: 300 DDYRTLVPKLLVETMASVGGSFVSRINLATGDFVPETKALSKGILDILSGDMPKGIKLQT 359
+ Y +V LL++T+ ++ S ++ A PE +
Sbjct: 274 NPYE-VVTVLLIQTLGALVPSLPMCLSEAVERAGPELE---------------------- 310
Query: 360 KHLEALIDLHNMTGTFARNIQ-----HLFSESDLQVLLDTLKAVYFPYDTFKQRYGQMER 414
L L++ ++ T FA+ ++ HL + +L +++ + AVY PY ++ +YG +E
Sbjct: 311 --LTRLLEFYDTTAHFAKGLEMALLPHL-QDHNLVKVVELVDAVYGPYKPYQLKYGDLEE 367
Query: 415 AILSSEIAGVDLRGAVTRGIGAQGIELSETVRRMEESIPQVIVLLEAAVERCISFTGGSE 474
+ L +I+ V L E+ + V+ + +S+ ++ L AAV+RC FT G
Sbjct: 368 SNLLIQISAVPLEHG----------EVIDCVQELSQSVHKLFGLASAAVDRCAKFTNGLG 417
Query: 475 ADELILALDDIMLQYISTLQELLKSLRAVCGVDHDGVGSKKEVGFDKKEGVSNARKADIS 534
L+ AL + +Y+S L+S+R C +D S
Sbjct: 418 TCGLLTALKSLFTKYVSHFTNALQSIRKKCKLDDIPPNS--------------------L 457
Query: 535 SEEEWSIVQGALQILTVADCLTSRSSVFEASLRATL-----ARLSTSL---SLSVFGSSL 586
+E+W+ Q +++I+ L + FE L + LS S SL+ F S+
Sbjct: 458 FQEDWTAFQNSVRIIATCGELLRQCGDFEQQLANRILSTAGKYLSDSYSPRSLAGFQDSI 517
Query: 587 --DQKQSQSANVDGHGELSVGGRAALDVAAVRLIDVPEKARKLFNLLDQSKDPRFHALPL 644
D+K + L A L + EK NLL S+ AL
Sbjct: 518 LTDKKSPAKNPWQEYNYLQKDNPAEYANLMEILYTLKEKGSSNHNLLSVSRT----ALTR 573
Query: 645 ASQRVAAFADAVNELVYDVLISKVRQRLSDVSRLPIWSS--VEEQSAFHLPTFSAYPQTY 702
+Q+ ++L +D + +++Q+L VSR+ W++ + E LP FS P Y
Sbjct: 574 LNQQ-------AHQLAFDSVFLRIKQQLLLVSRMDSWNTAGIGETLTDDLPAFSLTPLEY 626
Query: 703 VTSVGEYLLTLPQQLEPL-----------------------AEGISTSDNNDEAQFFATE 739
++++G+Y+++LP LEP E + DN A
Sbjct: 627 ISNIGQYIMSLPLNLEPFVTQEDSALELALHAGKLPFPPEQGEELPELDN------MADN 680
Query: 740 WMFKVAEGASALYMEQLRGIQYITDHGAQQLSVDIEYLSNVLSALSVPIPPALATFHTCL 799
W+ +A Y + + I +T H +QL+ DI+YL NV+ AL + L T L
Sbjct: 681 WLGSIARATMQTYCDGILQIPAVTPHSTKQLATDIDYLINVMDALGLQPSRTLQNIATLL 740
Query: 800 STPRDQLKDLLK 811
++ + + K
Sbjct: 741 KAKPEEYRQVSK 752
>sp|Q9VAD6|COG7_DROME Conserved oligomeric Golgi complex subunit 7 OS=Drosophila
melanogaster GN=Cog7 PE=2 SV=2
Length = 742
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 193/850 (22%), Positives = 345/850 (40%), Gaps = 148/850 (17%)
Query: 3 LDLGPFSDEKFDPKKWINSACQT------RHSQDSLDNHLVDLEMKLQMVSEEISASLEE 56
+D+ S+ F P +WIN+ + R ++ + KLQ+ ++ ++EE
Sbjct: 1 MDVSALSETTFSPAEWINANYKKFVEENGRDDSEAASAFIRSYVAKLQLYIFNVNNAVEE 60
Query: 57 QSASALLRVPRATRDVVRLRDDAISLRGSVSGILQKLKKAEGSSAESIAALSKVDTVKQR 116
S + +PR ++ L+ D L+ +S + ++ + + E +A L +++T Q+
Sbjct: 61 SSRQVVASMPRIAKESAALQADVHRLQEKMSAMRLEVAAVQSETGECMATLERLNTKSQK 120
Query: 117 MEAAYETLQDAAGLTQLSLTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQL 176
++ A E+LQ++ G L +ED F DL + L ++ L A ++ A + Q+
Sbjct: 121 LQVAKESLQESDGWGNLLAELEDGFERNDLKGVCDKLIALQKSLHAQEQLPGHAERQTQV 180
Query: 177 EVLEDRLDAMVQPRLTDALSNRKIDIARDLRGILIRIGRFKSLELHYTKVHLKYIKQLWE 236
E ++RL+A+ P + + + A+ I I R L+ +Y V + +Q W+
Sbjct: 181 EDFKNRLEALASPSVVQCFAEGNTEQAQHFVQIFTSIQRLPQLQQYYRAVQKNFWQQQWK 240
Query: 237 EFESRQRSSKIANEKNEVERISSNNEFQSSAPSVMFSSWLPSFYDELLLYLEQEWKWCMV 296
+ E Q + +L +YD+LL + +++ KWC
Sbjct: 241 Q----------------------TLELQGTESQPQQQQFLTLYYDQLLEHCQRQVKWCSN 278
Query: 297 AFPDDYRTLVPKLLVETMASVGGSFVSRINLATGDFVPETKALSKG-ILDILSGDMPKGI 355
F ++ + P L++ + +P + IL +L
Sbjct: 279 LFGEN--SPQPFLVI------------------AELLPALQPTRDAHILQLL-------- 310
Query: 356 KLQTKHLEALIDLHNMTGTFARNIQHLFSES------DLQVLLDTLKAVYFPYDTFKQRY 409
K + LE L + +F ++ L +S +L LL +A++ + F Q+Y
Sbjct: 311 KTSNERLEMLALFAKVNHSFVLHLNSLLEQSHITLSEELHRLLG--EAIFEYFHKFIQQY 368
Query: 410 GQMERAILSSEIAGVDLRGAVTRGIGAQGIELSETVRRMEESIPQVIVLLEAAVERCISF 469
++E LS+++ + A S+ VR +EES ++ L+ A ERC S
Sbjct: 369 PRLEETQLSTQVDRLSSNQATP----------SDGVRHLEESTRKLYEWLKEACERCASI 418
Query: 470 TGGSEADELILALDDIMLQYISTLQELLKSLRAVCGVDHDGVGSKKEVGFDKKEGVSNAR 529
T +LI L+ I + + + + + + G+S
Sbjct: 419 TSDLALCKLITLLNGIFKRQLESFGRIQRQI-----------------------GLSLGS 455
Query: 530 KADISSEEEWSIVQGAL-QILTVADCLTSRSSVFEASLRATLARLSTSLSLSVFGSSLDQ 588
+ + E WS++Q + Q+ +AD + FE L + LS L+
Sbjct: 456 SSYAAQSENWSLLQYTMSQLQCLAD-FQVQLHQFEQDLHTRMVMLSNRLT---------- 504
Query: 589 KQSQSANVDGHGELSVGGRAALDVAAVRLIDVPEKARKLFNLLD--QSKDPRFHALPLAS 646
G +++ + D + + L ++ D Q K +L +
Sbjct: 505 ------KPSNRGPITI----------FQTCDHAARTQLLNSIADYQQKKSEATDSLGIFP 548
Query: 647 QRVAA----FADAVNELVYDVLISKVRQRLSDVSRLPIWSSVEEQSAFHLPTFSAYPQTY 702
Q A FAD +++ ++L+ + L+ + R P+ S +P+FS PQ
Sbjct: 549 QIYATLKSHFAD-THDITLNILLQPIETHLAHI-RPPVQDHAA--SGIEMPSFSFAPQES 604
Query: 703 VTSVGEYLLTLPQQLEPLAEGISTSDNN---------DEAQFFATEWMFKVAEGASALYM 753
+T +G+YLLTLPQ LEPL S+ +A A + V E LY+
Sbjct: 605 ITQIGQYLLTLPQHLEPLLLSPSSLLKQALEVCNIKYTQAIPCADVLLSLVVEQCCVLYV 664
Query: 754 EQLRGIQYITDHGAQQLSVDIEYLSNVLSALSVPIPPALATFHTCLSTPRDQLKDLLKSD 813
Q+ I+ + A QLSVDIEYLSNVL L + I L+ T L DQ L
Sbjct: 665 TQILQIKSLPSSAATQLSVDIEYLSNVLEELGLSINLQLSQILTLLKAAPDQYLTL---S 721
Query: 814 SGNQLDLPTA 823
SG + L TA
Sbjct: 722 SGCEPRLVTA 731
>sp|Q54LC8|COG7_DICDI Conserved oligomeric Golgi complex subunit 7 OS=Dictyostelium
discoideum GN=cog7 PE=3 SV=1
Length = 996
Score = 143 bits (360), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/546 (22%), Positives = 247/546 (45%), Gaps = 83/546 (15%)
Query: 8 FSDEKFDPKKWIN---SAC--------QTRHSQDSL----DNHLVDLEM---------KL 43
FS F+ K WIN S C + +Q S+ +N +LE+ KL
Sbjct: 10 FSSNDFNSKTWINNLLSDCGGSGSSSGNAKSNQQSILTDQNNIKAELEIENICSNYLSKL 69
Query: 44 QMVSEEISASLEEQSASALLRVPRATRDVVRLRDDAISLRGSVSGILQKLKKAEG---SS 100
Q+ E++ SLE ++ +LL VP++ R+V R+R +++ L+ + I K+ + S
Sbjct: 70 QLYQIELNISLESITSESLLIVPKSIREVDRIRKESLHLKNRIKSISSKIGEMNNDSPQS 129
Query: 101 AESIAALSKVDTVKQRMEAAYETLQDAAGLTQLSLTVEDVFASGDLPRAAETLANMRHCL 160
E+++ + K+D VK RME + +L++A L S TV+ +F+S D ++ L ++ L
Sbjct: 130 METVSVIEKLDQVKSRMEISIRSLKEAEKLLSFSKTVDQLFSSNDYLMISDKLEEVKQSL 189
Query: 161 SAVGEVAEFANIRKQLEVLEDRLDAMVQPRLTDALSNRKIDIARDLRGILIRIGRFKSLE 220
S + +V EF K+ V +DRL++ ++ L +L + ++ ++ I I R
Sbjct: 190 SVLSDVPEFREQSKKFNVYQDRLESQLKQPLQQSLQQKDLESCKNYLKIFTNIQRQDKFF 249
Query: 221 LHYTKVHLKYIKQLWEEFESRQRSSKIANEKNEVERISSNNEFQSSAPSVMFSSWLPSFY 280
++Y +V + +K LW + S SS ++ F +WL FY
Sbjct: 250 IYYYQVRIDPLKLLWNSYSSSSSSSSSSSN---------------------FHNWLSKFY 288
Query: 281 DELLLYLEQEWKWCMVAFPDDYRTLVPKLLVETMASVGGSFVSRINLATGDFVPETKALS 340
DE+L+ + E+ W P DY ++ L++ ++ + SRI+ A
Sbjct: 289 DEVLVMINSEFNWLSGLCPIDYIQVLENLIIHLFTTINPNVQSRIDQA------------ 336
Query: 341 KGILDILSGDMPKGIKLQTKHLEALIDLHNMTGTFARNIQHLF-------SESDLQVLLD 393
+ I + + IK + L+ ++ T +F +++ +F S +D
Sbjct: 337 ---ITIANQTTQQPIK-----VNELLSIYKTTCSFLKSLSPIFPNIINSSSTPTTSPAVD 388
Query: 394 TL-KAVYFPYDTFKQRYGQMERAILSSEIAGVD-----LRGAVTRGIGAQGIELSETVRR 447
L K ++ PY F+ ++ + E + S++ + + + G+ + + ++
Sbjct: 389 KLFKVIFEPYKYFQNKFSEYEIKSVKSQLQSISPILTLQKKSGGGSGGSGNADFTNIIKN 448
Query: 448 ME-ESIPQVIVLLEAAVERCISFTGGSEADELI-LALDDIMLQYISTLQELLKSLRAVCG 505
+E + IP+ + + ++ER FT ++ D + L+ I + L++ + L+ + G
Sbjct: 449 IENQFIPKSFQIAQQSIERFFDFTHTTDIDSYVNTVLNQIFTEISLILRDTINELKFITG 508
Query: 506 VDHDGV 511
+ + +
Sbjct: 509 LTTNYI 514
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 737 ATEWMFKVAEGASALYMEQLRGIQYITDHGAQQLSVDIEYLSNVLSALSVPIPPALATFH 796
A +W+ VA+ LY++ + I + + QQLS DI YL NVLSAL V P L
Sbjct: 874 AHQWITIVAKATEKLYLQTIVEIITLNEPSCQQLSNDIGYLFNVLSALGVSAEPLLQKTQ 933
Query: 797 TCLSTPRD 804
+ L RD
Sbjct: 934 SLLEMNRD 941
>sp|A7Z7E7|MUTS2_BACA2 MutS2 protein OS=Bacillus amyloliquefaciens (strain FZB42) GN=mutS2
PE=3 SV=1
Length = 785
Score = 35.4 bits (80), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 21/130 (16%)
Query: 72 VVRLRDDAISLRGSVSGILQKLKKAEGSSAESIAALSKVD----TVKQRMEAAYETLQDA 127
V+RLR A G ++ I L++AE S + A +++ VKQ + +D
Sbjct: 56 VMRLRGHAPF--GGLTDIRSALRRAEIGSVLTPAEFTELSGLLYAVKQMKHFISQMTEDG 113
Query: 128 AGLTQLSLTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFAN-----IRKQLEVLE-- 180
G+ + E++ GDL R + C+ GEV + A+ IR QL LE
Sbjct: 114 VGIPLIQAHAEELITLGDLER------EINSCIDDHGEVLDHASPALRGIRTQLRTLESR 167
Query: 181 --DRLDAMVQ 188
DRL++M++
Sbjct: 168 VRDRLESMLR 177
>sp|A4VCH4|CP062_DANRE UPF0505 protein C16orf62 homolog OS=Danio rerio GN=zgc:163107 PE=2
SV=1
Length = 963
Score = 35.0 bits (79), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 718 EPLAEGISTSDNNDEAQFFATEWMFKVA---EGASALYMEQ--LRGIQYITDHGAQQLSV 772
PL E S D ND A+ W FK+A E LY+E L+ +++T G Q+
Sbjct: 258 HPLPESFSADDVNDTAKETCLNWFFKIASIRELVPRLYVEAALLKCNRFLTKCGIQE--- 314
Query: 773 DIEYLSNVLSALSVPIPPALATFHTC 798
++ L+ ++ + P+ A + C
Sbjct: 315 TLQRLTAMIRGIGDPLVAVYARAYLC 340
>sp|Q69Z38|PEAK1_MOUSE Pseudopodium-enriched atypical kinase 1 OS=Mus musculus GN=Peak1
PE=1 SV=4
Length = 1735
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 54/141 (38%), Gaps = 16/141 (11%)
Query: 498 KSLRAVCGVDHDGVGSKKEVGFDKKEGVSNARKADISSEEEWSIVQGALQILTVADCLTS 557
KSL+ +C VD+D + G+++ GVS QG++Q +DC +
Sbjct: 300 KSLQRICAVDYDDSYDEILNGYEENSGVSYG--------------QGSVQSTISSDCTSP 345
Query: 558 RSSVFEASLRATLARLSTSLSLSVFGSSLDQKQSQSANVDGHGELSVGGRAALD--VAAV 615
SS E S T + LS + A + + E G D + +
Sbjct: 346 GSSFTEESRSETASSLSQKVCNGGISPGNPGNSKDIAETESNFESPPGNNEEKDESLTSK 405
Query: 616 RLIDVPEKARKLFNLLDQSKD 636
+ VPE + + L Q KD
Sbjct: 406 SSVKVPETHKAVLALRLQEKD 426
>sp|Q62095|DDX3Y_MOUSE ATP-dependent RNA helicase DDX3Y OS=Mus musculus GN=Ddx3y PE=1 SV=2
Length = 658
Score = 34.7 bits (78), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 507 DHDGVGSKKEVGFDKKEGVSNARKADISSEEEWS 540
D+DG+G + GF K E ++R +D S E++WS
Sbjct: 103 DYDGIGGRDRTGFGKFERSGHSRWSDRSDEDDWS 136
>sp|A4SH04|MURD_PROVI UDP-N-acetylmuramoylalanine--D-glutamate ligase OS=Prosthecochloris
vibrioformis (strain DSM 265) GN=murD PE=3 SV=1
Length = 465
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 410 GQMERAILSSEIAGVD--LRGAVTRGIGAQGIELSETVRRMEESIPQVIVLLEAAVERCI 467
G+ A L +IA + LRG G+G G+ S V MEE V+ L +ERC+
Sbjct: 118 GKTTTATLVHDIAAAEGSLRGNRAWGVGNIGVPFSAMVGEMEEGDTAVVELSSYQLERCV 177
Query: 468 SF 469
+F
Sbjct: 178 TF 179
>sp|P25241|T3RE_BACC1 Type III restriction-modification system Bce10987IP enzyme res
OS=Bacillus cereus (strain ATCC 10987) GN=res PE=3 SV=2
Length = 987
Score = 34.7 bits (78), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 91/212 (42%), Gaps = 43/212 (20%)
Query: 211 IRIGRFKSLELHYTKVHLKY-------IKQLWEEFESR-----QRSSKIANEKNEVERIS 258
+R G+ + H KV +K +K+LW++F +R QR + + E+I
Sbjct: 660 LREGKVIDTKKHSIKVRVKLRKENWEKVKELWQQFSNRYMLEFQRIPETISFM--AEQIV 717
Query: 259 SNNE-FQSSAPSVMFSSWLPSFYDELLLYLEQEWKWCMVAFPDDYRTLVPKLLVETMASV 317
N+ ++ P M S S +E ++ EQE ++ + P MA
Sbjct: 718 GNHSLYEREVPMQMKESLHASDDNESVVLREQENEYQRIYLP-------------GMAY- 763
Query: 318 GGSFVSRINLATGDFVPETKA-LSKGILDILSGDMPKGIKLQTKHLEALIDLHNMTGTFA 376
G FV RIN+ATG + E A L K + L GD ++L L L+N+ F
Sbjct: 764 -GKFVKRINIATGIPIKEIHANLFKLMKSSLKGD--------ARYLSEL-SLNNIIREFK 813
Query: 377 RNIQHLFSESDLQVLLD--TLKAVYFP-YDTF 405
+ +F+++ LD A+Y P D+F
Sbjct: 814 KRFDEIFAQAYEYKKLDFQARTAIYNPEMDSF 845
>sp|Q1MQP3|SECA_LAWIP Protein translocase subunit SecA OS=Lawsonia intracellularis
(strain PHE/MN1-00) GN=secA PE=3 SV=1
Length = 831
Score = 34.3 bits (77), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 66 PRATRDVVRLRDDAISLRGS--VSGILQKLKKAEGSSAESIAALSKVDTVKQRMEAAY 121
P ++R + L DD + L GS +SG++Q+L EG E+I +++ ++R+E +
Sbjct: 535 PGSSRFYLSLEDDLMRLFGSDKLSGLMQRLGMEEGEPIENIMVSRAIESAQKRVEGHH 592
>sp|O83593|Y584_TREPA Uncharacterized protein TP_0584 OS=Treponema pallidum (strain
Nichols) GN=TP_0584 PE=4 SV=1
Length = 469
Score = 34.3 bits (77), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 179 LEDRLDAMVQPRLTDALSNRKIDIARDLRGILIRIGRFKSLELHYTKVH-LKYIK-QLWE 236
+E+R + M RL +AL+ RK+ + RD+ K+LE + +V +K I+ L +
Sbjct: 1 MEERKNYM--DRLAEALTRRKVQLDRDILP--------KALEQYRVQVTAVKAIRSNLLQ 50
Query: 237 EFESRQRSSKIANEKNEVERISSNNEFQSSAPSVMFSSWLPSFYDELLLYLEQEWKWCMV 296
+ + K ++ E+E ++ ++ P V+ S S Y +L +L+ +++
Sbjct: 51 KGFLHDDAYKYDSKMTEIELPETSPYGENEKPMVIGSRL--SHYQTMLGFLDNYYRF--- 105
Query: 297 AFPDDYRTLVPKLLVETMASVGGSFVSRINLATGDFVPETK-ALSKGILDILSGDM---- 351
D L+PK + + +A + G+F+ + DF TK A ++G+ DI+
Sbjct: 106 ----DSEFLIPKRIAKLVA-LNGTFMWK------DFTATTKDANTRGLFDIVQSFYGAAD 154
Query: 352 PKGIKLQTKHLEALIDLHNMTGT 374
P I L L+ L+ H + T
Sbjct: 155 PISIGLVRDSLQYLVKAHEVIST 177
>sp|Q9PFV5|RSMI_XYLFA Ribosomal RNA small subunit methyltransferase I OS=Xylella
fastidiosa (strain 9a5c) GN=rsmI PE=3 SV=1
Length = 273
Score = 33.5 bits (75), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 551 VADCLTSRSSVFEASLRATLARLSTSLSLSVFGSSLDQKQSQSANVDGH--GELSVGGRA 608
+A+CLT +++F + A +AR T + +V +L Q+Q AN D GE + +
Sbjct: 168 IAECLTDLATIFGSMRAAVVARELTKIFETVLDGTLATLQTQVANDDNQRKGEFVIIVQG 227
Query: 609 ALDVAAVRLIDVPEKARKLFNLLDQSKDP 637
A D A ++ + R+++ LL + P
Sbjct: 228 AADQDAAKITE----GRRVYALLKEHLPP 252
>sp|O00571|DDX3X_HUMAN ATP-dependent RNA helicase DDX3X OS=Homo sapiens GN=DDX3X PE=1 SV=3
Length = 662
Score = 33.5 bits (75), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 507 DHDGVGSKKE-VGFDKKEGVSNARKADISSEEEWS 540
D+DG+GS+ + GF K E N+R D S E++WS
Sbjct: 103 DYDGIGSRGDRSGFGKFERGGNSRWCDKSDEDDWS 137
>sp|Q80YF0|MD1L1_CRIGR Mitotic spindle assembly checkpoint protein MAD1 OS=Cricetulus
griseus GN=MAD1L1 PE=2 SV=1
Length = 717
Score = 33.1 bits (74), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 107/230 (46%), Gaps = 27/230 (11%)
Query: 28 SQDSLDNH---LVDLEMKLQMVSEEISASLEEQSASALLRVPRATRDVVRLRDDAISLR- 83
SQ+ +H + DLE KL + +E A++ + S LLR+PR R++ RLR++ LR
Sbjct: 214 SQEERADHEQKIKDLEQKLCL--QEQDAAVVKNMKSELLRLPRMERELKRLREENTHLRE 271
Query: 84 -----GSVSGILQKLKKAEGSSAESIAALSKVDTVKQRMEA---AYETLQDAAGLTQLSL 135
G ++ L+ L++ G + AL ++ K+++ A ++E L G+
Sbjct: 272 MKETNGLLTEELEGLQRKLGRQEKMQEALVDLELEKEKLLAKLQSWEKLDQTMGVN--LR 329
Query: 136 TVEDV--FASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEV-------LEDRLDAM 186
T ED+ F +L + TL + +++ E A + Q EV LE+R
Sbjct: 330 TPEDLSRFVV-ELQQRELTLKEKNNTITSSARGLEKAQQQLQDEVRQVSAQLLEERKKRE 388
Query: 187 VQPRLTDALSNRKIDIARDLRGILIRIGRFKSLELHYTKVHLKYIKQLWE 236
+ L L R + + ++ G+ +G + S EL + + +++WE
Sbjct: 389 IHEALARRLQKRIVLLTKERDGMRAILGSYDS-ELTQAEYSAQLTQRMWE 437
>sp|P46864|ATK2_ARATH Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1
Length = 745
Score = 33.1 bits (74), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 29/166 (17%)
Query: 33 DNHLVDLEMKLQMVSEEIS----------ASLEEQSASALLRVPRATRDVVRLRDDAISL 82
+ H DLE+ L++ EE++ AS++ Q A A + + R+ I++
Sbjct: 98 EKHCADLEVNLKVKEEELNMVIDELRKNFASVQVQLAKEQTEKLAANESLGKEREARIAV 157
Query: 83 RGSVSGILQKLKKAEGSSAESIAALSKVDTVKQRMEAA---YETLQDAAGLTQLSLTVED 139
+ I ++L K +G ++ T QR++A Y+ LQ+ SL + +
Sbjct: 158 ESLQAAITEELAKTQG----------ELQTANQRIQAVNDMYKLLQEYNS----SLQLYN 203
Query: 140 VFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDA 185
GDL A E + R G V N++ Q + L+D+L A
Sbjct: 204 SKLQGDLDEAHENIK--RGEKERTGIVESIGNLKGQFKALQDQLAA 247
>sp|Q5RF43|DDX3Y_PONAB ATP-dependent RNA helicase DDX3Y OS=Pongo abelii GN=DDX3Y PE=2 SV=1
Length = 658
Score = 33.1 bits (74), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 507 DHDGVGSKKEVGFDKKEGVSNARKADISSEEEWS 540
D+DG+G++ GF + E ++R D S E++WS
Sbjct: 102 DYDGIGNRDRPGFGRFERSGHSRWCDKSDEDDWS 135
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.365
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 277,156,862
Number of Sequences: 539616
Number of extensions: 10924020
Number of successful extensions: 35609
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 35518
Number of HSP's gapped (non-prelim): 134
length of query: 835
length of database: 191,569,459
effective HSP length: 126
effective length of query: 709
effective length of database: 123,577,843
effective search space: 87616690687
effective search space used: 87616690687
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)