BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003273
(834 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 1028 bits (2657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/847 (59%), Positives = 621/847 (73%), Gaps = 42/847 (4%)
Query: 20 NHLFTNIKLFSVTTTPCIKITSLLLRQCKSLTQVYLIHQQ-----IIVQNLTHVPPSHLI 74
+H + + LFS T+ P +IT + +CK+++QV LIHQ+ I+ NLT SHLI
Sbjct: 14 SHQYIKVSLFS-TSAP--EITPPFIHKCKTISQVKLIHQKLLSFGILTLNLT----SHLI 66
Query: 75 AAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPD 134
+ Y+S S A+SLL+R PS V+ WN+LIR + LF M W PD
Sbjct: 67 STYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPD 126
Query: 135 EYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFD 194
YTFPFV KACGE+ S RCG S HA+ +GF SNVFV NAL+AMY+RC +LS AR++FD
Sbjct: 127 NYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFD 186
Query: 195 EMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLG 254
EM + D+VSWN+I+ +YA+ G + L +F+RMT + + D ++LVN L CASLG
Sbjct: 187 EM---SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLG 243
Query: 255 TWSRGKQ--------------------------CGMMEEAKKVFERMKVKDVVSWNAMVT 288
T S GKQ CGMM+EA VF M VKDVVSWNAMV
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 289 GYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEP 348
GYS+IG FEDA LF+KM++E +K++VVTWSA I+GYAQRG G+EAL V RQM G++P
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 349 NVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSV-DGSHPDDLMVINALIDMYAKCKSV 407
N VTL+S+LSGCASVGAL+ GKE HCY IK + + H D+ MVIN LIDMYAKCK V
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 408 DVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCA 467
D AR MFD+++PK RDV TWTVMIG YSQ+G AN AL L +MF++D +PNAFT+SCA
Sbjct: 424 DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCA 483
Query: 468 LMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRN 527
L+ACA LAALR G+QIHAY LRNQ + FV+NCLIDMY++ G I AR+VFDN+ +N
Sbjct: 484 LVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKN 543
Query: 528 VVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFD 587
V+WTSLMTGYGMHG G++A FD+MR+ G DGVT LV+LYACSHSGM+DQG++YF+
Sbjct: 544 EVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFN 603
Query: 588 SMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANV 647
M FG+S EHYAC+VDLLGRA RL+ A+ LIE MPMEP P++WVA L+ CRIH V
Sbjct: 604 RMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKV 663
Query: 648 ELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQG 707
ELGE AA ++ EL S DGSYTLLSN+YANAGRWKDV RIRSLM+H GVKKRPGCSWV+G
Sbjct: 664 ELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEG 723
Query: 708 KEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHS 767
+GT TFFVGD+THP +++IY++L +QRIK +GYVP+T FALHDVDDEEK DLLFEHS
Sbjct: 724 IKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHS 783
Query: 768 EKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGS 827
EKLALAYGILTT G IRITKNLR+CGDCH+A T++S II+H+IILRDS+RFHHFK GS
Sbjct: 784 EKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGS 843
Query: 828 CTCKGYW 834
C+CKGYW
Sbjct: 844 CSCKGYW 850
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 551 bits (1421), Expect = e-156, Method: Compositional matrix adjust.
Identities = 293/734 (39%), Positives = 437/734 (59%), Gaps = 23/734 (3%)
Query: 101 FWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAV 160
+WN L+ + + LF +MM G D YTF V K+ L S G +H
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220
Query: 161 ICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDA 220
I SGF V N+L+A Y + + AR++FDEM + D++SWN+I+ Y +G A
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTER---DVISWNSIINGYVSNGLA 277
Query: 221 EGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDV 280
E GL +F +M ++ D ++V+ + CA S G+ + K F R +D
Sbjct: 278 EKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGRAVHSIG-VKACFSR---EDR 332
Query: 281 VSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQ 340
N ++ YS+ G + A A+F++M +V V+++++IAGYA+ G EA+ +F +
Sbjct: 333 FC-NTLLDMYSKCGDLDSAKAVFREMSDRSV----VSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 341 MQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDM 400
M+ G+ P+V T+ ++L+ CA L GK H + + L D + V NAL+DM
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFD------IFVSNALMDM 441
Query: 401 YAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPN 460
YAKC S+ A ++F + K D+ +W +IG YS+N AN+AL+LF + ++K P+
Sbjct: 442 YAKCGSMQEAELVFSEMRVK--DIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPD 498
Query: 461 AFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVF 520
T++C L ACA L+A GR+IH Y++RN Y VAN L+DMY++ G + A ++F
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGY-FSDRHVANSLVDMYAKCGALLLAHMLF 557
Query: 521 DNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVD 580
D++ +++VSWT ++ GYGMHG G +A F+QMR+ G+ D ++F+ LLYACSHSG+VD
Sbjct: 558 DDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVD 617
Query: 581 QGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNG 640
+G ++F+ M E I EHYACIVD+L R L +A IE MP+ P IW ALL G
Sbjct: 618 EGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCG 677
Query: 641 CRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRP 700
CRIH +V+L E A ++ ELE E G Y L++NIYA A +W+ V R+R + G++K P
Sbjct: 678 CRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNP 737
Query: 701 GCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKG 760
GCSW++ K F GD ++P+++ I L + R+ GY P T +AL D ++ EK
Sbjct: 738 GCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKE 797
Query: 761 DLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRF 820
+ L HSEKLA+A GI+++ G IR+TKNLR+CGDCH F+S + EI+LRDSNRF
Sbjct: 798 EALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRF 857
Query: 821 HHFKEGSCTCKGYW 834
H FK+G C+C+G+W
Sbjct: 858 HQFKDGHCSCRGFW 871
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 167/638 (26%), Positives = 301/638 (47%), Gaps = 36/638 (5%)
Query: 62 VQNLTHVPPSHLIAAYVSHNAPS--PALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNA 119
+QN + + YV N S + I+ SV N +RR +NA
Sbjct: 21 LQNQKEIRSGVRVRKYVIFNRASLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENA 80
Query: 120 FRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAM 179
+L + W D T VL+ C + S + G V I +GF + + + L M
Sbjct: 81 VKLLC--VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLM 138
Query: 180 YARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGD 239
Y C L A ++FDE+ I + WN ++ A+SGD G + LF +M V+ D
Sbjct: 139 YTNCGDLKEASRVFDEV---KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSS-GVEMD 194
Query: 240 GVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDA 299
+ + +SL + G+Q ER V N++V Y + + A
Sbjct: 195 SYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG-----NSLVAFYLKNQRVDSA 249
Query: 300 FALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSG 359
+F +M + +V ++W+++I GY G + L VF QM G+E ++ T+VS+ +G
Sbjct: 250 RKVFDEMTERDV----ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAG 305
Query: 360 CASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAP 419
CA + LG+ H +K S + N L+DMY+KC +D A+ +F ++
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDR------FCNTLLDMYSKCGDLDSAKAVFREMS- 358
Query: 420 KNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRF 479
+R V ++T MI Y++ G A +A+ LF +M +++ + P+ +T++ L CAR L
Sbjct: 359 -DRSVVSYTSMIAGYAREGLAGEAVKLFEEM--EEEGISPDVYTVTAVLNCCARYRLLDE 415
Query: 480 GRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYG 539
G+++H ++ N I FV+N L+DMY++ G + A +VF ++ ++++SW +++ GY
Sbjct: 416 GKRVHEWIKENDLGFDI-FVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYS 474
Query: 540 MHGLGDKAHWAFDQMRKEG-LAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISAR 598
+ ++A F+ + +E +PD T +L AC+ D+G + + + S R
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 599 AEHYA-CIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRL 657
H A +VD+ + L A L + + + + W ++ G +H + N++
Sbjct: 535 --HVANSLVDMYAKCGALLLAHMLFDDIASKDL-VSWTVMIAGYGMHGFGKEAIALFNQM 591
Query: 658 LELESEKDGSYTLLSNIYA--NAGRWKDVARIRSLMKH 693
+ E D + +S +YA ++G + R ++M+H
Sbjct: 592 RQAGIEAD-EISFVSLLYACSHSGLVDEGWRFFNIMRH 628
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 138/299 (46%), Gaps = 30/299 (10%)
Query: 96 SPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGS 155
S SV + ++I R L A +LF +M G PD YT VL C G
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGK 417
Query: 156 SVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYA 215
VH I + ++FV NALM MYA+C ++ A +F EM + DI+SWNTI+ Y+
Sbjct: 418 RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM---RVKDIISWNTIIGGYS 474
Query: 216 QSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQ-------------- 261
++ A L LF + + + D ++ L ACASL + +G++
Sbjct: 475 KNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR 534
Query: 262 ------------CGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQE 309
CG + A +F+ + KD+VSW M+ GY G ++A ALF +MRQ
Sbjct: 535 HVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQA 594
Query: 310 NVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQF-CGLEPNVVTLVSLLSGCASVGALL 367
++ + +++ +++ + G E F M+ C +EP V ++ A G L+
Sbjct: 595 GIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLI 653
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 295/797 (37%), Positives = 454/797 (56%), Gaps = 31/797 (3%)
Query: 41 SLLLRQCKSLTQVYLIHQQIIVQNL--THVPPSHLIAAYVSHNAPSPALSLLQRISPSPF 98
+LLL +C SL ++ I + L H + L++ + + + A + + I S
Sbjct: 41 ALLLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPID-SKL 99
Query: 99 SVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVH 158
+V + + +++ ++ D A + F++M P Y F ++LK CG+ R G +H
Sbjct: 100 NVLY-HTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 159 AVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSG 218
++ SGF ++F L MYA+C ++ AR++FD M + D+VSWNTIVA Y+Q+G
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPER---DLVSWNTIVAGYSQNG 215
Query: 219 DAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVK 278
A L + M + ++ +++V+ L A ++L S GK E R
Sbjct: 216 MARMALEMVKSMCEE-NLKPSFITIVSVLPAVSALRLISVGK------EIHGYAMRSGFD 268
Query: 279 DVVSWN-AMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDV 337
+V+ + A+V Y++ GS E A LF M + NV V+W+++I Y Q + EA+ +
Sbjct: 269 SLVNISTALVDMYAKCGSLETARQLFDGMLERNV----VSWNSMIDAYVQNENPKEAMLI 324
Query: 338 FRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINAL 397
F++M G++P V+++ L CA +G L G+ H LSV+ ++ V+N+L
Sbjct: 325 FQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH------KLSVELGLDRNVSVVNSL 378
Query: 398 IDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLV 457
I MY KCK VD A MF + ++R + +W MI ++QNG DAL F QM + + V
Sbjct: 379 ISMYCKCKEVDTAASMFGKL--QSRTLVSWNAMILGFAQNGRPIDALNYFSQM--RSRTV 434
Query: 458 KPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTAR 517
KP+ FT + A A L+ + IH V+R+ + + FV L+DMY++ G I AR
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNV-FVTTALVDMYAKCGAIMIAR 493
Query: 518 VVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSG 577
++FD + +R+V +W +++ GYG HG G A F++M+K + P+GVTFL ++ ACSHSG
Sbjct: 494 LIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSG 553
Query: 578 MVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVAL 637
+V+ GLK F M + + I +HY +VDLLGRA RL+EA + I MP++P ++ A+
Sbjct: 554 LVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAM 613
Query: 638 LNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVK 697
L C+IH NV E AA RL EL + G + LL+NIY A W+ V ++R M G++
Sbjct: 614 LGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLR 673
Query: 698 KRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDE 757
K PGCS V+ K +FF G HP S+KIY L L+ IK GYVP T+ L V+++
Sbjct: 674 KTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVEND 732
Query: 758 EKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDS 817
K LL HSEKLA+++G+L T GT I + KNLR+C DCH+A +IS++ EI++RD
Sbjct: 733 VKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDM 792
Query: 818 NRFHHFKEGSCTCKGYW 834
RFHHFK G+C+C YW
Sbjct: 793 QRFHHFKNGACSCGDYW 809
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 526 bits (1355), Expect = e-148, Method: Compositional matrix adjust.
Identities = 310/860 (36%), Positives = 468/860 (54%), Gaps = 72/860 (8%)
Query: 21 HLFTNIKLFSVTTTP-------CIKITSLLLRQCKSLTQVYLIHQQIIVQNLTH-VPPSH 72
HL + + TT P C K T L+ CK++ ++ + H+ + Q L + V
Sbjct: 9 HLSPMVLATTTTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTIT 68
Query: 73 LIAAYVSHNAPSPALSLLQRI---SPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRR 129
+ A +LS + + S S + F +N+LIR L + A LFL+MM
Sbjct: 69 KLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNS 128
Query: 130 GWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYA 189
G PD+YTFPF L AC + + G +H +I G+ ++FV N+L+ YA C L A
Sbjct: 129 GISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSA 188
Query: 190 RQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSA 249
R++FDEM + ++VSW +++ YA+ A+ + LF RM D +V + V++V +SA
Sbjct: 189 RKVFDEMSER---NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISA 245
Query: 250 CASLGTWSRGKQCGMMEEAKKVF-----ERMKVKDVVSWNAMVTGYSRIGSFEDAFALFK 304
CA L +E +KV+ ++V D++ +A+V Y + + + A LF
Sbjct: 246 CAKLED---------LETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAKRLFD 295
Query: 305 KMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVG 364
+ N+ L +A+ + Y ++G EAL VF M G+ P+ ++++S +S C+ +
Sbjct: 296 EYGASNLDL----CNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 365 ALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDV 424
+L GK H Y ++ +G D + NALIDMY KC D A +FD ++ N+ V
Sbjct: 352 NILWGKSCHGYVLR-----NGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMS--NKTV 403
Query: 425 ATWTVMIGSYSQNGGANDALALFPQM------------------------------FQQD 454
TW ++ Y +NG + A F M Q
Sbjct: 404 VTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Query: 455 KLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDID 514
+ V + T+ AC L AL + I+ Y+ +N ++ + + L+DM+SR GD +
Sbjct: 464 EGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR-LGTTLVDMFSRCGDPE 522
Query: 515 TARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACS 574
+A +F++L R+V +WT+ + M G ++A FD M ++GL PDGV F+ L ACS
Sbjct: 523 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS 582
Query: 575 HSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIW 634
H G+V QG + F SM K G+S HY C+VDLLGRA L+EAV+LIE MPMEP +IW
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642
Query: 635 VALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHT 694
+LL CR+ NVE+ AA ++ L E+ GSY LLSN+YA+AGRW D+A++R MK
Sbjct: 643 NSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEK 702
Query: 695 GVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDV 754
G++K PG S +Q + T F GD +HP+ I +L + QR +G+VP S L DV
Sbjct: 703 GLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDV 762
Query: 755 DDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIIL 814
D++EK +L HSEKLA+AYG++++ GT IRI KNLR+C DCHS F S + N EIIL
Sbjct: 763 DEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIIL 822
Query: 815 RDSNRFHHFKEGSCTCKGYW 834
RD+NRFH+ ++G C+C +W
Sbjct: 823 RDNNRFHYIRQGKCSCGDFW 842
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust.
Identities = 295/793 (37%), Positives = 432/793 (54%), Gaps = 98/793 (12%)
Query: 46 QCKSLTQVYLIHQQII-VQNLTHVPPSHLIAAYVSHNAPSPALSLLQRISPSPFSVFWWN 104
+ KS +Q +H Q I Q+L+H S +I+ Y + AL L + + P V W
Sbjct: 17 RIKSKSQAKQLHAQFIRTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPP--VLAWK 74
Query: 105 ALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSS 164
++IR L A F++M G PD FP VLK+C + R G SVH I
Sbjct: 75 SVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 165 GFDSNVFVCNALMAMYARCDTLSY---ARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAE 221
G D +++ NALM MYA+ + +FDEM Q + SGD +
Sbjct: 135 GMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQ--------------RTSNSGDED 180
Query: 222 GGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVV 281
V A + G ++ ++VFE M KDVV
Sbjct: 181 ----------------------VKAETCIMPFG----------IDSVRRVFEVMPRKDVV 208
Query: 282 SWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQM 341
S+N +IAGYAQ G +AL + R+M
Sbjct: 209 SYNT-----------------------------------IIAGYAQSGMYEDALRMVREM 233
Query: 342 QFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMY 401
L+P+ TL S+L + ++ GKE H Y I++ + D+ + ++L+DMY
Sbjct: 234 GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGID------SDVYIGSSLVDMY 287
Query: 402 AKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNA 461
AK ++ + +F + RD +W ++ Y QNG N+AL LF QM VKP A
Sbjct: 288 AKSARIEDSERVFSRLYC--RDGISWNSLVAGYVQNGRYNEALRLFRQMVTAK--VKPGA 343
Query: 462 FTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFD 521
S + ACA LA L G+Q+H YVLR + I F+A+ L+DMYS+ G+I AR +FD
Sbjct: 344 VAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI-FIASALVDMYSKCGNIKAARKIFD 402
Query: 522 NLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQ 581
+ + VSWT+++ G+ +HG G +A F++M+++G+ P+ V F+ +L ACSH G+VD+
Sbjct: 403 RMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 582 GLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGC 641
YF+SM+K +G++ EHYA + DLLGRA +L+EA I M +EPT +W LL+ C
Sbjct: 463 AWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSC 522
Query: 642 RIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPG 701
+H N+EL E A ++ ++SE G+Y L+ N+YA+ GRWK++A++R M+ G++K+P
Sbjct: 523 SVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPA 582
Query: 702 CSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGD 761
CSW++ K T F GDR+HP KI E L ++++++ GYV TS LHDVD+E K +
Sbjct: 583 CSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRE 642
Query: 762 LLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFH 821
LLF HSE+LA+A+GI+ T PGT IR+TKN+RIC DCH AI FIS I EII+RD++RFH
Sbjct: 643 LLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFH 702
Query: 822 HFKEGSCTCKGYW 834
HF G+C+C YW
Sbjct: 703 HFNRGNCSCGDYW 715
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 503 bits (1295), Expect = e-141, Method: Compositional matrix adjust.
Identities = 283/795 (35%), Positives = 451/795 (56%), Gaps = 34/795 (4%)
Query: 43 LLRQCKSLTQVYLIHQQIIV-QNLTHVPPS-HLIAAYVSHNAPSPALSLLQRISPSPFSV 100
L R C +L +H +++V + + +V S L+ Y + A I V
Sbjct: 60 LFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR--DV 117
Query: 101 FWWNALIRRAVRLRLPDNAFRLF-LQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHA 159
+ WN +I R R F L M+ G PD TFP VLKAC + G+ +H
Sbjct: 118 YAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHC 174
Query: 160 VICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGD 219
+ GF +V+V +L+ +Y+R + AR LFDEM + D+ SWN +++ Y QSG+
Sbjct: 175 LALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEM---PVRDMGSWNAMISGYCQSGN 231
Query: 220 AEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKD 279
A+ L L + D V++V+ LSAC G ++RG + + + ++ +
Sbjct: 232 AKEALTLSNGLRA-----MDSVTVVSLLSACTEAGDFNRG----VTIHSYSIKHGLESEL 282
Query: 280 VVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFR 339
VS N ++ Y+ G D +F +M ++ ++W+++I Y A+ +F+
Sbjct: 283 FVS-NKLIDLYAEFGRLRDCQKVFDRMYVRDL----ISWNSIIKAYELNEQPLRAISLFQ 337
Query: 340 QMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALID 399
+M+ ++P+ +TL+SL S + +G + + +T+++ G +D+ + NA++
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRK-----GWFLEDITIGNAVVV 392
Query: 400 MYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKP 459
MYAK VD AR +F+ + N DV +W +I Y+QNG A++A+ ++ M +++ +
Sbjct: 393 MYAKLGLVDSARAVFNWLP--NTDVISWNTIISGYAQNGFASEAIEMYNIM-EEEGEIAA 449
Query: 460 NAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVV 519
N T L AC++ ALR G ++H +L+N + + FV L DMY + G ++ A +
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV-FVVTSLADMYGKCGRLEDALSL 508
Query: 520 FDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMV 579
F + + N V W +L+ +G HG G+KA F +M EG+ PD +TF+ LL ACSHSG+V
Sbjct: 509 FYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLV 568
Query: 580 DQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLN 639
D+G F+ M ++GI+ +HY C+VD+ GRA +L+ A++ I+ M ++P IW ALL+
Sbjct: 569 DEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLS 628
Query: 640 GCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKR 699
CR+H NV+LG++A+ L E+E E G + LLSN+YA+AG+W+ V IRS+ G++K
Sbjct: 629 ACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKT 688
Query: 700 PGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEK 759
PG S ++ F+ G++THP +++Y L L ++K +GYVP F L DV+D+EK
Sbjct: 689 PGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEK 748
Query: 760 GDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNR 819
+L HSE+LA+A+ ++ T T IRI KNLR+CGDCHS FIS I EII+RDSNR
Sbjct: 749 EHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNR 808
Query: 820 FHHFKEGSCTCKGYW 834
FHHFK G C+C YW
Sbjct: 809 FHHFKNGVCSCGDYW 823
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 501 bits (1290), Expect = e-140, Method: Compositional matrix adjust.
Identities = 280/767 (36%), Positives = 430/767 (56%), Gaps = 105/767 (13%)
Query: 157 VHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQ 216
VH + SG +V++ N LM +Y++ +AR+LFDEM + SWNT+++AY++
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEM---PLRTAFSWNTVLSAYSK 92
Query: 217 SGDAEGGLMLFARMT---------------------GDVKVQGDGV---------SLVNA 246
GD + F ++ ++V GD V +L N
Sbjct: 93 RGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 247 LSACASLGTWSRGKQ--------------------------CGMMEEAKKVFERMKVKDV 280
L++ A+ GK+ CG AK VF+RM V+D+
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 281 VSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQ 340
SWNAM+ + ++G + A A F++M + ++ VTW+++I+G+ QRG+ ALD+F +
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDI----VTWNSMISGFNQRGYDLRALDIFSK 268
Query: 341 M-QFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALID 399
M + L P+ TL S+LS CA++ L +GK+ H + + + G +V+NALI
Sbjct: 269 MLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG------IVLNALIS 322
Query: 400 MYAKCKSVDVARVMFDA-------------------------------IAPKNRDVATWT 428
MY++C V+ AR + + ++ K+RDV WT
Sbjct: 323 MYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWT 382
Query: 429 VMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVL 488
MI Y Q+G +A+ LF M + +PN++TL+ L + LA+L G+QIH +
Sbjct: 383 AMIVGYEQHGSYGEAINLFRSMVGGGQ--RPNSYTLAAMLSVASSLASLSHGKQIHGSAV 440
Query: 489 RNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLK-QRNVVSWTSLMTGYGMHGLGDKA 547
++ E+ V+N LI MY+++G+I +A FD ++ +R+ VSWTS++ HG ++A
Sbjct: 441 KSG-EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499
Query: 548 HWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVD 607
F+ M EGL PD +T++ + AC+H+G+V+QG +YFD M I HYAC+VD
Sbjct: 500 LELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVD 559
Query: 608 LLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGS 667
L GRA L EA E IE MP+EP + W +LL+ CR+H N++LG++AA RLL LE E G+
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGA 619
Query: 668 YTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKI 727
Y+ L+N+Y+ G+W++ A+IR MK VKK G SW++ K F V D THP+ +I
Sbjct: 620 YSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEI 679
Query: 728 YEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTTAPGTPIRI 787
Y + + IK MGYVP T+ LHD+++E K +L HSEKLA+A+G+++T T +RI
Sbjct: 680 YMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRI 739
Query: 788 TKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
KNLR+C DCH+AI FIS ++ EII+RD+ RFHHFK+G C+C+ YW
Sbjct: 740 MKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 140/500 (28%), Positives = 230/500 (46%), Gaps = 78/500 (15%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVIC 162
W +I + A R+ M++ G P ++T VL + G VH+ I
Sbjct: 114 WTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIV 173
Query: 163 SSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGIC-------------------- 202
G NV V N+L+ MYA+C A+ +FD M I
Sbjct: 174 KLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMA 233
Query: 203 --------DIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLG 254
DIV+WN++++ + Q G L +F++M D + D +L + LSACA+L
Sbjct: 234 QFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLE 293
Query: 255 TWSRGKQ--------------------------CGMMEEAKKVFERMKVKD--VVSWNAM 286
GKQ CG +E A+++ E+ KD + + A+
Sbjct: 294 KLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTAL 353
Query: 287 VTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGL 346
+ GY ++G A +F ++ +VV W+A+I GY Q G EA+++FR M G
Sbjct: 354 LDGYIKLGDMNQAKNIFVSLKDR----DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQ 409
Query: 347 EPNVVTLVSLLSGCASVGALLLGKETHCYTIK--RVLSVDGSHPDDLMVINALIDMYAKC 404
PN TL ++LS +S+ +L GK+ H +K + SV V NALI MYAK
Sbjct: 410 RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVS--------VSNALITMYAKA 461
Query: 405 KSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTL 464
++ A FD I + RD +WT MI + +Q+G A +AL LF M + ++P+ T
Sbjct: 462 GNITSASRAFDLIRCE-RDTVSWTSMIIALAQHGHAEEALELFETMLMEG--LRPDHITY 518
Query: 465 SCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVAN--CLIDMYSRSGDIDTARVVFDN 522
AC + GRQ + + + +IP +++ C++D++ R+G + A+ +
Sbjct: 519 VGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEK 576
Query: 523 LK-QRNVVSWTSLMTGYGMH 541
+ + +VV+W SL++ +H
Sbjct: 577 MPIEPDVVTWGSLLSACRVH 596
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 171/383 (44%), Gaps = 56/383 (14%)
Query: 87 LSLLQRISPSPFSVFWWNALI----RRAVRLRLPDNAFRLFLQMMRRGW-HPDEYTFPFV 141
L++ Q + + WN++I +R LR A +F +M+R PD +T V
Sbjct: 230 LAMAQFEQMAERDIVTWNSMISGFNQRGYDLR----ALDIFSKMLRDSLLSPDRFTLASV 285
Query: 142 LKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGI 201
L AC L G +H+ I ++GFD + V NAL++MY+RC + AR+L ++ +
Sbjct: 286 LSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDL 345
Query: 202 C------------------------------DIVSWNTIVAAYAQSGDAEGGLMLFARMT 231
D+V+W ++ Y Q G + LF M
Sbjct: 346 KIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMV 405
Query: 232 GDVKVQGDGVSLVNALSACASLGTWSRGKQC-GMMEEAKKVFERMKVKDVVSWNAMVTGY 290
G + + + +L LS +SL + S GKQ G ++ +++ V NA++T Y
Sbjct: 406 GGGQ-RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYS------VSVSNALITMY 458
Query: 291 SRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNV 350
++ G+ A F +R E + V+W+++I AQ GH EAL++F M GL P+
Sbjct: 459 AKAGNITSASRAFDLIRCER---DTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 351 VTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVA 410
+T V + S C G + G++ + VD P L ++D++ + + A
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQ----YFDMMKDVDKIIP-TLSHYACMVDLFGRAGLLQEA 570
Query: 411 RVMFDAIAPKNRDVATWTVMIGS 433
+ + + P DV TW ++ +
Sbjct: 571 QEFIEKM-PIEPDVVTWGSLLSA 592
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 459 PNAFTLSCALMACARL-------AALRFGRQ-IHAYVLRNQYEMLIPFVANCLIDMYSRS 510
P +LS L C L + RF Q +H V+++ M ++ N L+++YS++
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGL-MFSVYLMNNLMNVYSKT 62
Query: 511 GDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLL 570
G AR +FD + R SW ++++ Y G D FDQ+ + D V++ ++
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQR----DSVSWTTMI 118
Query: 571 YACSHSGMVDQGLKYFDSMSKE 592
+ G + ++ M KE
Sbjct: 119 VGYKNIGQYHKAIRVMGDMVKE 140
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 499 bits (1284), Expect = e-140, Method: Compositional matrix adjust.
Identities = 282/763 (36%), Positives = 424/763 (55%), Gaps = 79/763 (10%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYT-----------FPFVLKACGELPSS 151
WN I +R + A R+F +M R W Y F K E+P
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPR--WSSVSYNGMISGYLRNGEFELARKLFDEMP-- 122
Query: 152 RCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIV 211
+ ++ N ++ Y R L AR+LF+ M + +C SWNT++
Sbjct: 123 ---------------ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC---SWNTML 164
Query: 212 AAYAQSGDAEGGLMLFARMTGDVKVQGDG-----VSLVNALSAC---------------A 251
+ YAQ+G + +F RM V + V AC
Sbjct: 165 SGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNC 224
Query: 252 SLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENV 311
LG + + K+ + EA++ F+ M V+DVVSWN ++TGY++ G ++A LF E+
Sbjct: 225 LLGGFVKKKK---IVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLF----DESP 277
Query: 312 KLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKE 371
+V TW+A+++GY Q EA ++F +M E N V+ ++L+G + + KE
Sbjct: 278 VQDVFTWTAMVSGYIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKE 333
Query: 372 THCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMI 431
R +S N +I YA+C + A+ +FD + PK RD +W MI
Sbjct: 334 LFDVMPCRNVST----------WNTMITGYAQCGKISEAKNLFDKM-PK-RDPVSWAAMI 381
Query: 432 GSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQ 491
YSQ+G + +AL LF QM ++ + ++F S AL CA + AL G+Q+H +++
Sbjct: 382 AGYSQSGHSFEALRLFVQMEREGGRLNRSSF--SSALSTCADVVALELGKQLHGRLVKGG 439
Query: 492 YEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAF 551
YE FV N L+ MY + G I+ A +F + +++VSW +++ GY HG G+ A F
Sbjct: 440 YETGC-FVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFF 498
Query: 552 DQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGR 611
+ M++EGL PD T + +L ACSH+G+VD+G +YF +M++++G+ ++HYAC+VDLLGR
Sbjct: 499 ESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGR 558
Query: 612 ANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLL 671
A L++A L++ MP EP IW LL R+H N EL E AA+++ +E E G Y LL
Sbjct: 559 AGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLL 618
Query: 672 SNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEIL 731
SN+YA++GRW DV ++R M+ GVKK PG SW++ + T TF VGD HP+ +I+ L
Sbjct: 619 SNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFL 678
Query: 732 AGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNL 791
L R+K GYV +TS LHDV++EEK ++ HSE+LA+AYGI+ + G PIR+ KNL
Sbjct: 679 EELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNL 738
Query: 792 RICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
R+C DCH+AI +++ I IILRD+NRFHHFK+GSC+C YW
Sbjct: 739 RVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 183/400 (45%), Gaps = 56/400 (14%)
Query: 196 MFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGV---SLVNALSACA- 251
+ + G DI WN +++Y ++G L +F RM V +G+ L N A
Sbjct: 56 LLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELAR 115
Query: 252 ---------SLGTWS-------RGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGS 295
L +W+ R + G +A+++FE M +DV SWN M++GY++ G
Sbjct: 116 KLFDEMPERDLVSWNVMIKGYVRNRNLG---KARELFEIMPERDVCSWNTMLSGYAQNGC 172
Query: 296 FEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVS 355
+DA ++F +M ++ N V+W+A+++ Y Q EA +F+ + L V+
Sbjct: 173 VDDARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNC 224
Query: 356 LLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFD 415
LL G ++ ++ D + D++ N +I YA+ +D AR +FD
Sbjct: 225 LLGGFVKKKKIVEARQF----------FDSMNVRDVVSWNTIITGYAQSGKIDEARQLFD 274
Query: 416 AIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLA 475
+P +DV TWT M+ Y QN +A LF DK+ + N + + L +
Sbjct: 275 E-SPV-QDVFTWTAMVSGYIQNRMVEEARELF------DKMPERNEVSWNAMLAGYVQGE 326
Query: 476 ALRFGRQIHAYV-LRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSL 534
+ +++ + RN N +I Y++ G I A+ +FD + +R+ VSW ++
Sbjct: 327 RMEMAKELFDVMPCRN------VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAM 380
Query: 535 MTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACS 574
+ GY G +A F QM +EG + +F L C+
Sbjct: 381 IAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCA 420
Score = 102 bits (255), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 127/292 (43%), Gaps = 27/292 (9%)
Query: 73 LIAAYVSHNAPSPALSLLQRISP-SPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGW 131
+I Y S A +L ++ P S W A+I + A RLF+QM R G
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVS---WAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 132 HPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQ 191
+ +F L C ++ + G +H + G+++ FV NAL+ MY +C ++ A
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 192 LFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACA 251
LF EM DIVSWNT++A Y++ G E L F M + ++ D ++V LSAC+
Sbjct: 466 LFKEMAGK---DIVSWNTMIAGYSRHGFGEVALRFFESMKRE-GLKPDDATMVAVLSACS 521
Query: 252 SLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNA-----MVTGYSRIGSFEDAFALFKKM 306
G +G+Q F M V N+ MV R G EDA L K M
Sbjct: 522 HTGLVDKGRQ---------YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
Query: 307 RQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLS 358
E + W ++ A R HG+ L + +EP + LLS
Sbjct: 573 PFEP---DAAIWGTLLG--ASRVHGNTELAETAADKIFAMEPENSGMYVLLS 619
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 164/397 (41%), Gaps = 74/397 (18%)
Query: 245 NALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFK 304
N A+ + R Q + + K + D+ WN ++ Y R G +A +FK
Sbjct: 29 NNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFK 88
Query: 305 KMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVG 364
+M + + V+++ +I+GY + G A +F +M
Sbjct: 89 RM----PRWSSVSYNGMISGYLRNGEFELARKLFDEM----------------------- 121
Query: 365 ALLLGKETHCYTIKRVLSVDGSHPD-DLMVINALIDMYAKCKSVDVARVMFDAIAPKNRD 423
P+ DL+ N +I Y + +++ AR +F+ I P+ RD
Sbjct: 122 -----------------------PERDLVSWNVMIKGYVRNRNLGKARELFE-IMPE-RD 156
Query: 424 VATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQI 483
V +W M+ Y+QNG +DA ++F D++ + N + + L A + + +
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVF------DRMPEKNDVSWNALLSAYVQNSKME----- 205
Query: 484 HAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGL 543
A +L E NCL+ + + I AR FD++ R+VVSW +++TGY G
Sbjct: 206 EACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGK 265
Query: 544 GDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYA 603
D+A FD E D T+ ++ + MV++ + FD M + +S A
Sbjct: 266 IDEARQLFD----ESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAG 321
Query: 604 CIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNG 640
+ + R++ A EL + MP W ++ G
Sbjct: 322 YV-----QGERMEMAKELFDVMPCRNVS-TWNTMITG 352
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust.
Identities = 274/764 (35%), Positives = 442/764 (57%), Gaps = 28/764 (3%)
Query: 73 LIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWH 132
L++ Y ++ S A L +V W N+++ LF +M G
Sbjct: 223 LVSMYAKNDDLSAARRLFDGFQEKGDAVLW-NSILSSYSTSGKSLETLELFREMHMTGPA 281
Query: 133 PDEYTFPFVLKACGELPSSRCGSSVHA-VICSSGFDSNVFVCNALMAMYARCDTLSYARQ 191
P+ YT L AC ++ G +HA V+ SS S ++VCNAL+AMY RC + A +
Sbjct: 282 PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAER 341
Query: 192 LFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACA 251
+ +M D+V+WN+++ Y Q+ + L F+ M + D VS+ + ++A
Sbjct: 342 ILRQMNNA---DVVTWNSLIKGYVQNLMYKEALEFFSDMIA-AGHKSDEVSMTSIIAASG 397
Query: 252 SLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENV 311
L G ME V + ++ N ++ YS+ F +M +++
Sbjct: 398 RLSNLLAG-----MELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDL 452
Query: 312 KLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKE 371
++W+ VIAGYAQ EAL++FR + +E + + L S+L + + ++L+ KE
Sbjct: 453 ----ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKE 508
Query: 372 THCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMI 431
HC+ +++ L D ++ N L+D+Y KC+++ A +F++I K +DV +WT MI
Sbjct: 509 IHCHILRKGLL-------DTVIQNELVDVYGKCRNMGYATRVFESI--KGKDVVSWTSMI 559
Query: 432 GSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQ 491
S + NG ++A+ LF +M + + ++ L C L A A L+AL GR+IH Y+LR
Sbjct: 560 SSSALNGNESEAVELFRRMVETG--LSADSVALLCILSAAASLSALNKGREIHCYLLRKG 617
Query: 492 YEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAF 551
+ L +A ++DMY+ GD+ +A+ VFD ++++ ++ +TS++ YGMHG G A F
Sbjct: 618 F-CLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELF 676
Query: 552 DQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGR 611
D+MR E ++PD ++FL LLYACSH+G++D+G + M E+ + EHY C+VD+LGR
Sbjct: 677 DKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGR 736
Query: 612 ANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLL 671
AN + EA E ++ M EPT +W ALL CR H+ E+GE+AA RLLELE + G+ L+
Sbjct: 737 ANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLV 796
Query: 672 SNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEIL 731
SN++A GRW DV ++R+ MK +G++K PGCSW++ F D++HP+S++IYE L
Sbjct: 797 SNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKL 856
Query: 732 AGLVQRI-KAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKN 790
+ + +++ + +GYV T F LH+VD+ EK +L HSE++A+AYG+L T +RITKN
Sbjct: 857 SEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKN 916
Query: 791 LRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
LR+C DCH+ +S + +I++RD+NRFHHF+ G C+C W
Sbjct: 917 LRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 215 bits (547), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 171/578 (29%), Positives = 279/578 (48%), Gaps = 60/578 (10%)
Query: 99 SVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVH 158
+ F WN +I V P +A L+ M G +FP +LKAC +L R GS +H
Sbjct: 146 TAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELH 205
Query: 159 AVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSG 218
+++ G+ S F+ NAL++MYA+ D LS AR+LFD + G D V WN+I+++Y+ SG
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKG--DAVLWNSILSSYSTSG 263
Query: 219 DAEGGLMLFAR--MTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMK 276
+ L LF MTG + ++V+AL+AC GK+ A +
Sbjct: 264 KSLETLELFREMHMTGPAP---NSYTIVSALTACDGFSYAKLGKEI----HASVLKSSTH 316
Query: 277 VKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALD 336
++ NA++ Y+R G A + ++M +VVTW+++I GY Q EAL+
Sbjct: 317 SSELYVCNALIAMYTRCGKMPQAERILRQMNNA----DVVTWNSLIKGYVQNLMYKEALE 372
Query: 337 VFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINA 396
F M G + + V++ S+++ + LL G E H Y IK +L V N
Sbjct: 373 FFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH------GWDSNLQVGNT 426
Query: 397 LIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKL 456
LIDMY+KC F + ++D+ +WT +I Y+QN +AL LF + + K
Sbjct: 427 LIDMYSKCNLTCYMGRAF--LRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAK--KR 482
Query: 457 VKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTA 516
++ + L L A + L ++ ++IH ++LR +L + N L+D+Y + ++ A
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG--LLDTVIQNELVDVYGKCRNMGYA 540
Query: 517 RVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHS 576
VF+++K ++VVSWTS+++ ++G +A F +M + GL+ D V L +L A +
Sbjct: 541 TRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASL 600
Query: 577 GMVDQGLK-YFDSMSKEFGIS-----ARAEHYACIVDLLGRANRLDE------------- 617
+++G + + + K F + A + YAC DL D
Sbjct: 601 SALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMI 660
Query: 618 -----------AVELIEGMPME---PTPIIWVALLNGC 641
AVEL + M E P I ++ALL C
Sbjct: 661 NAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYAC 698
Score = 165 bits (418), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/443 (28%), Positives = 210/443 (47%), Gaps = 33/443 (7%)
Query: 138 FPFVLKACGELPSSRCGSSVHAVICSS--GFDSNVFVCNALMAMYARCDTLSYARQLFDE 195
F +VL+ CG+ + G +H+ I + F+ + F+ L+ MY +C +L A ++FDE
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 196 MFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVN---ALSACAS 252
M +WNT++ AY +G+ L L+ M +V+G + L + L ACA
Sbjct: 142 MPDR---TAFAWNTMIGAYVSNGEPASALALYWNM----RVEGVPLGLSSFPALLKACAK 194
Query: 253 LGTWSRGKQCGMMEEAKKVFERMKVKDV-VSWNAMVTGYSRIGSFEDAFALFKKMRQENV 311
L G E + ++ NA+V+ Y++ A LF ++
Sbjct: 195 LRDIRSGS------ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE--- 245
Query: 312 KLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKE 371
K + V W+++++ Y+ G E L++FR+M G PN T+VS L+ C LGKE
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 372 THCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMI 431
H +K +H +L V NALI MY +C + A + + N DV TW +I
Sbjct: 306 IHASVLK-----SSTHSSELYVCNALIAMYTRCGKMPQAERILRQM--NNADVVTWNSLI 358
Query: 432 GSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQ 491
Y QN +AL F M K + +++ + A RL+ L G ++HAYV+++
Sbjct: 359 KGYVQNLMYKEALEFFSDMIAAGH--KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 492 YEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAF 551
++ + V N LIDMYS+ F + ++++SWT+++ GY + +A F
Sbjct: 417 WDSNLQ-VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELF 475
Query: 552 DQMRKEGLAPDGVTFLVLLYACS 574
+ K+ + D + +L A S
Sbjct: 476 RDVAKKRMEIDEMILGSILRASS 498
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 93/212 (43%), Gaps = 2/212 (0%)
Query: 468 LMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRN 527
L C + A+ GRQ+H+ + + + F+A L+ MY + G +D A VFD + R
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEMPDRT 146
Query: 528 VVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFD 587
+W +++ Y +G A + MR EG+ +F LL AC+ + G +
Sbjct: 147 AFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSE-LH 205
Query: 588 SMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANV 647
S+ + G + +V + + + L A L +G + ++W ++L+
Sbjct: 206 SLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK- 264
Query: 648 ELGELAANRLLELESEKDGSYTLLSNIYANAG 679
L L R + + SYT++S + A G
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDG 296
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 497 bits (1280), Expect = e-139, Method: Compositional matrix adjust.
Identities = 292/840 (34%), Positives = 455/840 (54%), Gaps = 49/840 (5%)
Query: 13 SKTPLTLNHLFTNIKLFSVT-------TTPCIKITSLLLRQCKSLTQVYL---IHQQIIV 62
S+ L L T I++ S T T PC+ ++ C ++ V + +H ++
Sbjct: 162 SRNELYDEVLETFIEMISTTDLLPDHFTYPCV------IKACAGMSDVGIGLAVHGLVVK 215
Query: 63 QNLTH--VPPSHLIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAF 120
L + L++ Y +H + AL L I P ++ WN++IR + +F
Sbjct: 216 TGLVEDVFVGNALVSFYGTHGFVTDALQLFD-IMPER-NLVSWNSMIRVFSDNGFSEESF 273
Query: 121 RLFLQMMRR----GWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNAL 176
L +MM + PD T VL C G VH D + + NAL
Sbjct: 274 LLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNAL 333
Query: 177 MAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARM-TGDVK 235
M MY++C ++ A+ +F ++VSWNT+V ++ GD G + +M G
Sbjct: 334 MDMYSKCGCITNAQMIFKMNNNK---NVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGED 390
Query: 236 VQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGS 295
V+ D V+++NA+ C K+ K+ F V + + NA V Y++ GS
Sbjct: 391 VKADEVTILNAVPVCFHESFLPSLKELHCYS-LKQEF----VYNELVANAFVASYAKCGS 445
Query: 296 FEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVS 355
A +F +R + V +W+A+I G+AQ +LD QM+ GL P+ T+ S
Sbjct: 446 LSYAQRVFHGIRSKTVN----SWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCS 501
Query: 356 LLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFD 415
LLS C+ + +L LGKE H + I+ L DL V +++ +Y C + + +FD
Sbjct: 502 LLSACSKLKSLRLGKEVHGFIIRNWLE------RDLFVYLSVLSLYIHCGELCTVQALFD 555
Query: 416 AIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLA 475
A+ +++ + +W +I Y QNG + AL +F QM ++ ++ AC+ L
Sbjct: 556 AM--EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYG--IQLCGISMMPVFGACSLLP 611
Query: 476 ALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLM 535
+LR GR+ HAY L++ E F+A LIDMY+++G I + VF+ LK+++ SW +++
Sbjct: 612 SLRLGREAHAYALKHLLED-DAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670
Query: 536 TGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGI 595
GYG+HGL +A F++M++ G PD +TFL +L AC+HSG++ +GL+Y D M FG+
Sbjct: 671 MGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGL 730
Query: 596 SARAEHYACIVDLLGRANRLDEAVELI-EGMPMEPTPIIWVALLNGCRIHANVELGELAA 654
+HYAC++D+LGRA +LD+A+ ++ E M E IW +LL+ CRIH N+E+GE A
Sbjct: 731 KPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVA 790
Query: 655 NRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATF 714
+L ELE EK +Y LLSN+YA G+W+DV ++R M ++K GCSW++ +F
Sbjct: 791 AKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSF 850
Query: 715 FVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAY 774
VG+R ++I + + L +I MGY P T HD+ +EEK + L HSEKLAL Y
Sbjct: 851 VVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTY 910
Query: 775 GILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
G++ T+ GT IR+ KNLRIC DCH+A IS ++ EI++RD+ RFHHFK G C+C YW
Sbjct: 911 GLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 156/554 (28%), Positives = 284/554 (51%), Gaps = 33/554 (5%)
Query: 99 SVFWWNALIRRAVRLRLPDNAFRLFLQMMR-RGWHPDEYTFPFVLKACGELPSSRCGSSV 157
++F WNA+I R L D F++M+ PD +T+P V+KAC + G +V
Sbjct: 150 NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAV 209
Query: 158 HAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQS 217
H ++ +G +VFV NAL++ Y ++ A QLFD M + ++VSWN+++ ++ +
Sbjct: 210 HGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER---NLVSWNSMIRVFSDN 266
Query: 218 GDAEGGLMLFARM---TGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFER 274
G +E +L M GD D +LV L CA R ++ G+ + +
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCA------REREIGLGKGVHGWAVK 320
Query: 275 MKV-KDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHE 333
+++ K++V NA++ YS+ G +A +FK N NVV+W+ ++ G++ G H
Sbjct: 321 LRLDKELVLNNALMDMYSKCGCITNAQMIFKM----NNNKNVVSWNTMVGGFSAEGDTHG 376
Query: 334 ALDVFRQMQFCG--LEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDL 391
DV RQM G ++ + VT+++ + C L KE HCY++K+ +
Sbjct: 377 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE------ 430
Query: 392 MVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMF 451
+V NA + YAKC S+ A+ +F I +++ V +W +IG ++Q+ +L QM
Sbjct: 431 LVANAFVASYAKCGSLSYAQRVFHGI--RSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 452 QQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSG 511
L P++FT+ L AC++L +LR G+++H +++RN E + FV ++ +Y G
Sbjct: 489 ISGLL--PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDL-FVYLSVLSLYIHCG 545
Query: 512 DIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLY 571
++ T + +FD ++ +++VSW +++TGY +G D+A F QM G+ G++ + +
Sbjct: 546 ELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFG 605
Query: 572 ACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTP 631
ACS + G + K + A ++D+ + + ++ ++ G+ E +
Sbjct: 606 ACSLLPSLRLGREAHAYALKHL-LEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKST 663
Query: 632 IIWVALLNGCRIHA 645
W A++ G IH
Sbjct: 664 ASWNAMIMGYGIHG 677
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/443 (26%), Positives = 211/443 (47%), Gaps = 32/443 (7%)
Query: 140 FVLKACGELPSSRCGSSVHAVIC-SSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQ 198
+L+A G+ G +H ++ S+ ++ +C ++ MYA C + +R +FD +
Sbjct: 89 LLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRS 148
Query: 199 PGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSR 258
++ WN ++++Y+++ + L F M + D + + ACA +
Sbjct: 149 K---NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGI 205
Query: 259 GKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTW 318
G + V + V+DV NA+V+ Y G DA LF M + N+V+W
Sbjct: 206 GLAVHGL-----VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPER----NLVSW 256
Query: 319 SAVIAGYAQRGHGHEALDVFRQMQF----CGLEPNVVTLVSLLSGCASVGALLLGKETHC 374
+++I ++ G E+ + +M P+V TLV++L CA + LGK H
Sbjct: 257 NSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHG 316
Query: 375 YTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSY 434
+ +K L +D +L++ NAL+DMY+KC + A+++F N++V +W M+G +
Sbjct: 317 WAVK--LRLD----KELVLNNALMDMYSKCGCITNAQMIFK--MNNNKNVVSWNTMVGGF 368
Query: 435 SQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEM 494
S G + + QM + VK + T+ A+ C + L +++H Y L+ ++ +
Sbjct: 369 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEF-V 427
Query: 495 LIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFD-- 552
VAN + Y++ G + A+ VF ++ + V SW +L+ G H + + D
Sbjct: 428 YNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGG---HAQSNDPRLSLDAH 484
Query: 553 -QMRKEGLAPDGVTFLVLLYACS 574
QM+ GL PD T LL ACS
Sbjct: 485 LQMKISGLLPDSFTVCSLLSACS 507
Score = 122 bits (307), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 179/385 (46%), Gaps = 39/385 (10%)
Query: 211 VAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKK 270
++ + ++GD + GD + D LV L + GK+ + E +K
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVRE---ALGLLLQASGKRKDI-EMGRK 105
Query: 271 VFE------RMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAG 324
+ + R++ DV+ ++T Y+ GS +D+ +F +R +N+ W+AVI+
Sbjct: 106 IHQLVSGSTRLRNDDVLC-TRIITMYAMCGSPDDSRFVFDALRSKNL----FQWNAVISS 160
Query: 325 YAQRGHGHEALDVFRQM-QFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSV 383
Y++ E L+ F +M L P+ T ++ CA + + +G H +K L
Sbjct: 161 YSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL-- 218
Query: 384 DGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDA 443
+D+ V NAL+ Y V A +FD I P+ R++ +W MI +S NG + ++
Sbjct: 219 ----VEDVFVGNALVSFYGTHGFVTDALQLFD-IMPE-RNLVSWNSMIRVFSDNGFSEES 272
Query: 444 LALFPQMFQQ--DKLVKPNAFTLSCALMACARLAALRFGRQIHAYV--LRNQYEMLIPFV 499
L +M ++ D P+ TL L CAR + G+ +H + LR E+++
Sbjct: 273 FLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLN-- 330
Query: 500 ANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRK--- 556
N L+DMYS+ G I A+++F +NVVSW +++ G+ G H FD +R+
Sbjct: 331 -NALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVLRQMLA 386
Query: 557 --EGLAPDGVTFLVLLYACSHSGMV 579
E + D VT L + C H +
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFL 411
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 8/198 (4%)
Query: 389 DDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFP 448
+D ++ +I MYA C S D +R +FDA+ KN + W +I SYS+N ++ L F
Sbjct: 118 NDDVLCTRIITMYAMCGSPDDSRFVFDALRSKN--LFQWNAVISSYSRNELYDEVLETFI 175
Query: 449 QMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYS 508
+M L+ P+ FT C + ACA ++ + G +H V++ + FV N L+ Y
Sbjct: 176 EMISTTDLL-PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDV-FVGNALVSFYG 233
Query: 509 RSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE----GLAPDGV 564
G + A +FD + +RN+VSW S++ + +G +++ +M +E PD
Sbjct: 234 THGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVA 293
Query: 565 TFLVLLYACSHSGMVDQG 582
T + +L C+ + G
Sbjct: 294 TLVTVLPVCAREREIGLG 311
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 32/237 (13%)
Query: 449 QMFQQDKLVKPNAF-----TLSCALMACARLAALRFGRQIHAYV-----LRNQYEMLIPF 498
Q F D +AF L L A + + GR+IH V LRN
Sbjct: 67 QEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRND-----DV 121
Query: 499 VANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQM-RKE 557
+ +I MY+ G D +R VFD L+ +N+ W ++++ Y + L D+ F +M
Sbjct: 122 LCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTT 181
Query: 558 GLAPDGVTFLVLLYACSHSGMVDQGLKY-FDSMSKEFGISARAEHYACIVDLLGRANRLD 616
L PD T+ ++ AC +GM D G+ + + G+ +V G +
Sbjct: 182 DLLPDHFTYPCVIKAC--AGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVT 239
Query: 617 EAVELIEGMPMEPTPIIWVALL-----NGCRIHANVELGELAANRLLELESEKDGSY 668
+A++L + MP E + W +++ NG + + LGE+ +E DG++
Sbjct: 240 DALQLFDIMP-ERNLVSWNSMIRVFSDNGFSEESFLLLGEM-------MEENGDGAF 288
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 269/739 (36%), Positives = 408/739 (55%), Gaps = 72/739 (9%)
Query: 155 SSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAY 214
+ HA I SG ++ ++ L+A Y+ + + A + + P I S+++++ A
Sbjct: 35 TQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDP---TIYSFSSLIYAL 91
Query: 215 AQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQ------------- 261
++ + +F+RM + D L N CA L + GKQ
Sbjct: 92 TKAKLFTQSIGVFSRMFSHGLIP-DSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 262 -------------CGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQ 308
CG M +A+KVF+RM KDVV+ +A++ Y+R G E+ + +M
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 309 ENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLL 368
++ N+V+W+ +++G+ + G+ EA+ +F+++ G P+ VT+ S+L L +
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNM 270
Query: 369 GKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAK---------------------CKS- 406
G+ H Y IK+ L D VI+A+IDMY K C +
Sbjct: 271 GRLIHGYVIKQGLLKDKC------VISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAY 324
Query: 407 ---------VDVARVMFDAIAPKNRD--VATWTVMIGSYSQNGGANDALALFPQMFQQDK 455
VD A MF+ + + V +WT +I +QNG +AL LF +M Q
Sbjct: 325 ITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM--QVA 382
Query: 456 LVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDT 515
VKPN T+ L AC +AAL GR H + +R + + V + LIDMY++ G I+
Sbjct: 383 GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR-VHLLDNVHVGSALIDMYAKCGRINL 441
Query: 516 ARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSH 575
+++VF+ + +N+V W SLM G+ MHG + F+ + + L PD ++F LL AC
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 576 SGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWV 635
G+ D+G KYF MS+E+GI R EHY+C+V+LLGRA +L EA +LI+ MP EP +W
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWG 561
Query: 636 ALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTG 695
ALLN CR+ NV+L E+AA +L LE E G+Y LLSNIYA G W +V IR+ M+ G
Sbjct: 562 ALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLG 621
Query: 696 VKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVD 755
+KK PGCSW+Q K T GD++HPQ +I E + + + ++ G+ P FALHDV+
Sbjct: 622 LKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVE 681
Query: 756 DEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILR 815
++E+ +L+ HSEKLA+ +G+L T GTP+++ KNLRICGDCH+ I FIS EI +R
Sbjct: 682 EQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIR 741
Query: 816 DSNRFHHFKEGSCTCKGYW 834
D+NRFHHFK+G C+C +W
Sbjct: 742 DTNRFHHFKDGICSCGDFW 760
Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 144/564 (25%), Positives = 271/564 (48%), Gaps = 84/564 (14%)
Query: 71 SHLIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRG 130
+ LIA+Y ++N + A +LQ I P P +++ +++LI + +L + +F +M G
Sbjct: 54 AKLIASYSNYNCFNDADLVLQSI-PDP-TIYSFSSLIYALTKAKLFTQSIGVFSRMFSHG 111
Query: 131 WHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYAR 190
PD + P + K C EL + + G +H V C SG D + FV ++ MY RC + AR
Sbjct: 112 LIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDAR 171
Query: 191 QLFD-------------------------------EMFQPGI-CDIVSWNTIVAAYAQSG 218
++FD EM GI +IVSWN I++ + +SG
Sbjct: 172 KVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSG 231
Query: 219 DAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGK------------------ 260
+ +++F ++ + D V++ + L + + G+
Sbjct: 232 YHKEAVVMFQKIH-HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVI 290
Query: 261 --------QCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVK 312
+ G + +F + ++ + NA +TG SR G + A +F+ +++ ++
Sbjct: 291 SAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTME 350
Query: 313 LNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKET 372
LNVV+W+++IAG AQ G EAL++FR+MQ G++PN VT+ S+L C ++ AL G+ T
Sbjct: 351 LNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRST 410
Query: 373 HCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIG 432
H + + RV +D H V +ALIDMYAKC +++++++F+ + KN + W ++
Sbjct: 411 HGFAV-RVHLLDNVH-----VGSALIDMYAKCGRINLSQIVFNMMPTKN--LVCWNSLMN 462
Query: 433 SYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALR-----FGRQIHAYV 487
+S +G A + +++F + + +KP+ + + L AC ++ F Y
Sbjct: 463 GFSMHGKAKEVMSIFESLMRTR--LKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYG 520
Query: 488 LRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLK-QRNVVSWTSLMTGYGMHGLGDK 546
++ + E +C++++ R+G + A + + + + W +L+ + D
Sbjct: 521 IKPRLEHY-----SCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDL 575
Query: 547 AHWAFDQMRKEGLAPDGVTFLVLL 570
A A +++ L P+ VLL
Sbjct: 576 AEIAAEKLFH--LEPENPGTYVLL 597
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 282/737 (38%), Positives = 426/737 (57%), Gaps = 30/737 (4%)
Query: 96 SPFSVFWWNALIRRAVRLRLPDNAFRLFLQMM-RRGWHPDEYTFPFVLKACGELPSSRCG 154
S ++F WN L+ + D A L+ +M+ G PD YTFP VL+ CG +P G
Sbjct: 156 SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARG 215
Query: 155 SSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAY 214
VH + G++ ++ V NAL+ MY +C + AR LFD M + DI+SWN +++ Y
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRR---DIISWNAMISGY 272
Query: 215 AQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFER 274
++G GL LF M G + V D ++L + +SAC LG G+ A +
Sbjct: 273 FENGMCHEGLELFFAMRG-LSVDPDLMTLTSVISACELLGDRRLGRDI----HAYVITTG 327
Query: 275 MKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEA 334
V D+ N++ Y GS+ +A LF +M ++++ V+W+ +I+GY +A
Sbjct: 328 FAV-DISVCNSLTQMYLNAGSWREAEKLFSRMERKDI----VSWTTMISGYEYNFLPDKA 382
Query: 335 LDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIK-RVLSVDGSHPDDLMV 393
+D +R M ++P+ +T+ ++LS CA++G L G E H IK R++S ++V
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY-------VIV 435
Query: 394 INALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQ 453
N LI+MY+KCK +D A +F I KN V +WT +I N +AL QM
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKN--VISWTSIIAGLRLNNRCFEALIFLRQM--- 490
Query: 454 DKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDI 513
++PNA TL+ AL ACAR+ AL G++IHA+VLR L F+ N L+DMY R G +
Sbjct: 491 KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVG-LDDFLPNALLDMYVRCGRM 549
Query: 514 DTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYAC 573
+TA F N ++++V SW L+TGY G G FD+M K + PD +TF+ LL C
Sbjct: 550 NTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGC 608
Query: 574 SHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPII 633
S S MV QGL YF M +++G++ +HYAC+VDLLGRA L EA + I+ MP+ P P +
Sbjct: 609 SKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAV 667
Query: 634 WVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKH 693
W ALLN CRIH ++LGEL+A + EL+ + G Y LL N+YA+ G+W++VA++R +MK
Sbjct: 668 WGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKE 727
Query: 694 TGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHD 753
G+ GCSWV+ K F D+ HPQ+++I +L G +++ +G + + D
Sbjct: 728 NGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKISESSSMD 787
Query: 754 VDDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEII 813
+ + ++ HSE+ A+A+G++ T PG PI +TKNL +C +CH + FIS + EI
Sbjct: 788 ETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKTVRREIS 847
Query: 814 LRDSNRFHHFKEGSCTC 830
+RD+ FHHFK+G C+C
Sbjct: 848 VRDAEHFHHFKDGECSC 864
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 191/386 (49%), Gaps = 55/386 (14%)
Query: 263 GMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVI 322
G + +A VF +M +++ SWN +V GY++ G F++A L+ +M W
Sbjct: 143 GNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRM----------LWVG-- 190
Query: 323 AGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLS 382
G++P+V T +L C + L GKE H + ++
Sbjct: 191 ----------------------GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRY--- 225
Query: 383 VDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGAND 442
+ D+ V+NALI MY KC V AR++FD + P+ RD+ +W MI Y +NG ++
Sbjct: 226 ---GYELDIDVVNALITMYVKCGDVKSARLLFDRM-PR-RDIISWNAMISGYFENGMCHE 280
Query: 443 ALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANC 502
L LF M + V P+ TL+ + AC L R GR IHAYV+ + + I V N
Sbjct: 281 GLELFFAM--RGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDIS-VCNS 337
Query: 503 LIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPD 562
L MY +G A +F ++++++VSWT++++GY + L DKA + M ++ + PD
Sbjct: 338 LTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPD 397
Query: 563 GVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACI----VDLLGRANRLDEA 618
+T +L AC+ G +D G++ + I AR Y + +++ + +D+A
Sbjct: 398 EITVAAVLSACATLGDLDTGVEL-----HKLAIKARLISYVIVANNLINMYSKCKCIDKA 452
Query: 619 VELIEGMPMEPTPIIWVALLNGCRIH 644
+++ +P I W +++ G R++
Sbjct: 453 LDIFHNIP-RKNVISWTSIIAGLRLN 477
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 132/256 (51%), Gaps = 10/256 (3%)
Query: 322 IAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVL 381
+ G G EA+ + MQ + + V+L+ C A G + + + +
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 382 SVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGAN 441
S+ + + NA + M+ + ++ A +F ++ +N + +W V++G Y++ G +
Sbjct: 126 SLG------VELGNAFLAMFVRFGNLVDAWYVFGKMSERN--LFSWNVLVGGYAKQGYFD 177
Query: 442 DALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVAN 501
+A+ L+ +M VKP+ +T C L C + L G+++H +V+R YE+ I V N
Sbjct: 178 EAMCLYHRMLWVGG-VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDID-VVN 235
Query: 502 CLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAP 561
LI MY + GD+ +AR++FD + +R+++SW ++++GY +G+ + F MR + P
Sbjct: 236 ALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDP 295
Query: 562 DGVTFLVLLYACSHSG 577
D +T ++ AC G
Sbjct: 296 DLMTLTSVISACELLG 311
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 123/318 (38%), Gaps = 43/318 (13%)
Query: 437 NGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLI 496
NG +A+ L M + V + F L C A G ++++ L + + +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRL--CEWKRAQEEGSKVYSIALSSMSSLGV 129
Query: 497 PFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMR- 555
+ N + M+ R G++ A VF + +RN+ SW L+ GY G D+A + +M
Sbjct: 130 E-LGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 556 KEGLAPDGVTFLVLLYACS-----------HSGMVDQGLKY-FDSMSKEFGISARAEHYA 603
G+ PD TF +L C H +V G + D ++ + +
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248
Query: 604 CIVDLLGRANRLD------------------EAVEL---IEGMPMEPTPIIWVALLNGCR 642
L R R D E +EL + G+ ++P + ++++ C
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 643 IHANVELGELAANRLLELESEKDGSY-TLLSNIYANAGRWKDVARIRSLMKHTGVKKRPG 701
+ + LG ++ D S L+ +Y NAG W++ ++ S M+ +
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDI----- 363
Query: 702 CSWVQGKEGTATFFVGDR 719
SW G F+ D+
Sbjct: 364 VSWTTMISGYEYNFLPDK 381
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 489 bits (1260), Expect = e-137, Method: Compositional matrix adjust.
Identities = 291/907 (32%), Positives = 449/907 (49%), Gaps = 115/907 (12%)
Query: 26 IKLFSVTTTPCIKITSLLLRQCK----SLTQVYLIHQQIIVQNL--THVPPSHLIAAYVS 79
+++ S TP S +L C+ + V IH +I+ Q L + V + LI Y
Sbjct: 175 VRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSR 234
Query: 80 HNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFP 139
+ A + + S W A+I + A RLF M G P Y F
Sbjct: 235 NGFVDLARRVFDGLRLKDHSS--WVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFS 292
Query: 140 FVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQP 199
VL AC ++ S G +H ++ GF S+ +VCNAL+++Y L A +F M Q
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
Query: 200 GICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRG 259
D V++NT++ +Q G E + LF RM D ++ D +L + + AC++ GT RG
Sbjct: 353 ---DAVTYNTLINGLSQCGYGEKAMELFKRMHLD-GLEPDSNTLASLVVACSADGTLFRG 408
Query: 260 KQ--------------------------CGMMEEAKKVFERMKVKDVVSWNAMVTGYS-- 291
+Q C +E A F +V++VV WN M+ Y
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 292 ---------------------------------RIGSFEDAFALFKKMRQENVKLN---- 314
R+G E + ++ + N +LN
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVC 528
Query: 315 ---------------------------VVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLE 347
VV+W+ +IAGY Q +AL FRQM G+
Sbjct: 529 SVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIR 588
Query: 348 PNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSV 407
+ V L + +S CA + AL G++ H S DL NAL+ +Y++C +
Sbjct: 589 SDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFS------SDLPFQNALVTLYSRCGKI 642
Query: 408 DVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCA 467
+ + + F+ D W ++ + Q+G +AL +F +M ++ + N FT A
Sbjct: 643 EESYLAFEQTEAG--DNIAWNALVSGFQQSGNNEEALRVFVRMNREG--IDNNNFTFGSA 698
Query: 468 LMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRN 527
+ A + A ++ G+Q+HA + + Y+ V N LI MY++ G I A F + +N
Sbjct: 699 VKAASETANMKQGKQVHAVITKTGYDSETE-VCNALISMYAKCGSISDAEKQFLEVSTKN 757
Query: 528 VVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFD 587
VSW +++ Y HG G +A +FDQM + P+ VT + +L ACSH G+VD+G+ YF+
Sbjct: 758 EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFE 817
Query: 588 SMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANV 647
SM+ E+G+S + EHY C+VD+L RA L A E I+ MP++P ++W LL+ C +H N+
Sbjct: 818 SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNM 877
Query: 648 ELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQG 707
E+GE AA+ LLELE E +Y LLSN+YA + +W R MK GVKK PG SW++
Sbjct: 878 EIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 937
Query: 708 KEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHS 767
K +F+VGD+ HP + +I+E L +R +GYV L+++ E+K ++F HS
Sbjct: 938 KNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHS 997
Query: 768 EKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGS 827
EKLA+++G+L+ PI + KNLR+C DCH+ I F+S + N EII+RD+ RFHHF+ G+
Sbjct: 998 EKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGA 1057
Query: 828 CTCKGYW 834
C+CK YW
Sbjct: 1058 CSCKDYW 1064
Score = 219 bits (557), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 154/551 (27%), Positives = 267/551 (48%), Gaps = 27/551 (4%)
Query: 99 SVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKAC-GELPSSRCGSSV 157
++F WN +I+ L F LF++M+ P+E TF VL+AC G + +
Sbjct: 150 TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQI 209
Query: 158 HAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQS 217
HA I G + VCN L+ +Y+R + AR++FD + + D SW +++ +++
Sbjct: 210 HARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL---RLKDHSSWVAMISGLSKN 266
Query: 218 GDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKV 277
+ LF M + + + + LSAC + + G+Q + V +
Sbjct: 267 ECEAEAIRLFCDMYV-LGIMPTPYAFSSVLSACKKIESLEIGEQLHGL-----VLKLGFS 320
Query: 278 KDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDV 337
D NA+V+ Y +G+ A +F M Q + VT++ +I G +Q G+G +A+++
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAMEL 376
Query: 338 FRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINAL 397
F++M GLEP+ TL SL+ C++ G L G++ H YT K + + + AL
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNK------IEGAL 430
Query: 398 IDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLV 457
+++YAKC ++ A F + + +V W VM+ +Y ++ +F QM Q + +
Sbjct: 431 LNLYAKCADIETALDYF--LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQM--QIEEI 486
Query: 458 KPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTAR 517
PN +T L C RL L G QIH+ +++ ++ L +V + LIDMY++ G +DTA
Sbjct: 487 VPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQ-LNAYVCSVLIDMYAKLGKLDTAW 545
Query: 518 VVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSG 577
+ ++VVSWT+++ GY + DKA F QM G+ D V + AC+
Sbjct: 546 DILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQ 605
Query: 578 MVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVAL 637
+ +G + + + G S+ +V L R +++E+ E I W AL
Sbjct: 606 ALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDN-IAWNAL 663
Query: 638 LNGCRIHANVE 648
++G + N E
Sbjct: 664 VSGFQQSGNNE 674
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 133/507 (26%), Positives = 234/507 (46%), Gaps = 49/507 (9%)
Query: 129 RGWHPDEYTFPFVLKACGELPSS-RCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLS 187
RG P+ T ++L+ C + S G +H+ I G DSN + L Y L
Sbjct: 78 RGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLY 137
Query: 188 YARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNAL 247
A ++FDEM + I +WN ++ A LF RM + +G + L
Sbjct: 138 GAFKVFDEMPER---TIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEG-TFSGVL 193
Query: 248 SACASLGTWSRGKQCG--MMEE--AKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALF 303
AC RG ++E+ A+ +++ ++ VV N ++ YSR G + A +F
Sbjct: 194 EAC-------RGGSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSRNGFVDLARRVF 245
Query: 304 KKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASV 363
+R ++ +W A+I+G ++ EA+ +F M G+ P S+LS C +
Sbjct: 246 DGLRLKDHS----SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKI 301
Query: 364 GALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRD 423
+L +G++ H +K S D V NAL+ +Y ++ A +F ++ RD
Sbjct: 302 ESLEIGEQLHGLVLKLGFS------SDTYVCNALVSLYFHLGNLISAEHIFSNMS--QRD 353
Query: 424 VATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQI 483
T+ +I SQ G A+ LF +M D L +P++ TL+ ++AC+ L G+Q+
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRM-HLDGL-EPDSNTLASLVVACSADGTLFRGQQL 411
Query: 484 HAYVLRNQYEMLIPFVAN-----CLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGY 538
HAY + + F +N L+++Y++ DI+TA F + NVV W ++ Y
Sbjct: 412 HAYTTK------LGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAY 465
Query: 539 GMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSK-EFGISA 597
G+ + F QM+ E + P+ T+ +L C G ++ G + + K F ++A
Sbjct: 466 GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA 525
Query: 598 RAEHYAC--IVDLLGRANRLDEAVELI 622
Y C ++D+ + +LD A +++
Sbjct: 526 ----YVCSVLIDMYAKLGKLDTAWDIL 548
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 185/404 (45%), Gaps = 57/404 (14%)
Query: 263 GMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVI 322
G + A KVF+ M + + +WN M+ + + F LF +M ENV N T+S V+
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVL 193
Query: 323 AGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLS 382
A RG G A DV Q+ H + + L
Sbjct: 194 E--ACRG-GSVAFDVVEQI-------------------------------HARILYQGLR 219
Query: 383 VDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGAND 442
D +V N LID+Y++ VD+AR +FD + K D ++W MI S+N +
Sbjct: 220 ------DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLK--DHSSWVAMISGLSKNECEAE 271
Query: 443 ALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANC 502
A+ LF M+ + P AF S L AC ++ +L G Q+H VL+ + +V N
Sbjct: 272 AIRLFCDMYVLGIMPTPYAF--SSVLSACKKIESLEIGEQLHGLVLKLGFSS-DTYVCNA 328
Query: 503 LIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPD 562
L+ +Y G++ +A +F N+ QR+ V++ +L+ G G G+KA F +M +GL PD
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 563 GVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELI 622
T L+ ACS G + +G + + + + G ++ + +++L + ++ A++
Sbjct: 389 SNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 623 EGMPMEPTPIIWVALL----------NGCRIHANVELGELAANR 656
+E ++W +L N RI +++ E+ N+
Sbjct: 448 LETEVENV-VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQ 490
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 31/203 (15%)
Query: 453 QDKLVKPNAFTLSCALMACARL-AALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSG 511
+++ ++PN TL L C + +L GR++H+ +L+ + ++ L D Y G
Sbjct: 76 ENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDS-NGCLSEKLFDFYLFKG 134
Query: 512 DIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLY 571
D+ A VFD + +R + +W ++ L + F +M E + P+ TF +L
Sbjct: 135 DLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLE 194
Query: 572 ACS------------HSGMVDQGLKYFDSMSKEFGISARAEHYAC--IVDLLGRANRLDE 617
AC H+ ++ QGL R C ++DL R +D
Sbjct: 195 ACRGGSVAFDVVEQIHARILYQGL--------------RDSTVVCNPLIDLYSRNGFVDL 240
Query: 618 AVELIEGMPMEPTPIIWVALLNG 640
A + +G+ ++ WVA+++G
Sbjct: 241 ARRVFDGLRLKDHS-SWVAMISG 262
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust.
Identities = 277/746 (37%), Positives = 406/746 (54%), Gaps = 36/746 (4%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSR---CGSSVHA 159
WN+LI + A F M+ P +T V+ AC LP G VHA
Sbjct: 167 WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHA 226
Query: 160 VICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGD 219
G + N F+ N L+AMY + L+ ++ L G D+V+WNT++++ Q+
Sbjct: 227 YGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSF---GGRDLVTWNTVLSSLCQNEQ 282
Query: 220 AEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKD 279
L M + V+ D ++ + L AC+ L GK+ + ++
Sbjct: 283 LLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD----EN 337
Query: 280 VVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFR 339
+A+V Y +F M + L W+A+IAGY+Q H EAL +F
Sbjct: 338 SFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGL----WNAMIAGYSQNEHDKEALLLFI 393
Query: 340 QMQ-FCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALI 398
M+ GL N T+ ++ C GA + H + +KR L D V N L+
Sbjct: 394 GMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLD------RDRFVQNTLM 447
Query: 399 DMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLV- 457
DMY++ +D+A +F + ++RD+ TW MI Y + DAL L +M ++ V
Sbjct: 448 DMYSRLGKIDIAMRIFGKM--EDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVS 505
Query: 458 --------KPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSR 509
KPN+ TL L +CA L+AL G++IHAY ++N + V + L+DMY++
Sbjct: 506 KGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVA-VGSALVDMYAK 564
Query: 510 SGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVL 569
G + +R VFD + Q+NV++W ++ YGMHG G +A M +G+ P+ VTF+ +
Sbjct: 565 CGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISV 624
Query: 570 LYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEP 629
ACSHSGMVD+GL+ F M ++G+ ++HYAC+VDLLGRA R+ EA +L+ MP +
Sbjct: 625 FAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDF 684
Query: 630 TPI-IWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIR 688
W +LL RIH N+E+GE+AA L++LE Y LL+NIY++AG W +R
Sbjct: 685 NKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVR 744
Query: 689 SLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTS 748
MK GV+K PGCSW++ + F GD +HPQS+K+ L L +R++ GYVP TS
Sbjct: 745 RNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTS 804
Query: 749 FALHDVDDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMII 808
LH+V+++EK LL HSEKLA+A+GIL T+PGT IR+ KNLR+C DCH A FIS I+
Sbjct: 805 CVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIV 864
Query: 809 NHEIILRDSNRFHHFKEGSCTCKGYW 834
+ EIILRD RFH FK G+C+C YW
Sbjct: 865 DREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 214 bits (546), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 172/644 (26%), Positives = 299/644 (46%), Gaps = 46/644 (7%)
Query: 65 LTHVPPSHLIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFL 124
L P+ S + +P++ + Q SP WW L+R VR L A ++
Sbjct: 32 LLRATPTSATEDVASAVSGAPSIFISQSRSPE-----WWIDLLRSKVRSNLLREAVLTYV 86
Query: 125 QMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFD-SNVFVCNALMAMYARC 183
M+ G PD Y FP +LKA +L G +HA + G+ +V V N L+ +Y +C
Sbjct: 87 DMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKC 146
Query: 184 DTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSL 243
++FD + + + VSWN+++++ E L F R D V+ +L
Sbjct: 147 GDFGAVYKVFDRISER---NQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTL 202
Query: 244 VNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALF 303
V+ ++AC++L G G A + R + N +V Y ++G + L
Sbjct: 203 VSVVTACSNL-PMPEGLMMGKQVHAYGL--RKGELNSFIINTLVAMYGKLGKLASSKVLL 259
Query: 304 KKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASV 363
++VTW+ V++ Q EAL+ R+M G+EP+ T+ S+L C+ +
Sbjct: 260 GSFGGR----DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHL 315
Query: 364 GALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRD 423
L GKE H Y +K +GS ++ V +AL+DMY CK V R +FD + +R
Sbjct: 316 EMLRTGKELHAYALK-----NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMF--DRK 368
Query: 424 VATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQI 483
+ W MI YSQN +AL LF M + L+ N+ T++ + AC R A I
Sbjct: 369 IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL-ANSTTMAGVVPACVRSGAFSRKEAI 427
Query: 484 HAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGL 543
H +V++ + FV N L+DMYSR G ID A +F ++ R++V+W +++TGY
Sbjct: 428 HGFVVKRGLDR-DRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEH 486
Query: 544 GDKAHWAFDQMR-----------KEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKE 592
+ A +M+ + L P+ +T + +L +C+ + +G K + + +
Sbjct: 487 HEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG-KEIHAYAIK 545
Query: 593 FGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGEL 652
++ + +VD+ + L + ++ + +P + I W ++ +H N G+
Sbjct: 546 NNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGN---GQE 601
Query: 653 AAN--RLLELESEKDGSYTLLSNIYA--NAGRWKDVARIRSLMK 692
A + R++ ++ K T +S A ++G + RI +MK
Sbjct: 602 AIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMK 645
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 257/741 (34%), Positives = 417/741 (56%), Gaps = 35/741 (4%)
Query: 99 SVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVH 158
+V W LI R + D LF++M G P+ +TF L E G VH
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 159 AVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSG 218
V+ +G D + V N+L+ +Y +C + AR LFD + + +V+WN++++ YA +G
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFD---KTEVKSVVTWNSMISGYAANG 274
Query: 219 -DAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQ--CGMMEEAKKVFERM 275
D E M ++ V++ S + + CA+L +Q C +++ + +
Sbjct: 275 LDLEALGMFYSMRLNYVRLSES--SFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 276 KVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEAL 335
+ A++ YS+ + DA LFK++ NVV+W+A+I+G+ Q EA+
Sbjct: 333 RT-------ALMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAV 382
Query: 336 DVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVIN 395
D+F +M+ G+ PN T +L+ + E H +K ++ V
Sbjct: 383 DLFSEMKRKGVRPNEFTYSVILTALPVISP----SEVHAQVVKT------NYERSSTVGT 432
Query: 396 ALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDK 455
AL+D Y K V+ A +F I ++D+ W+ M+ Y+Q G A+ +F ++ +
Sbjct: 433 ALLDAYVKLGKVEEAAKVFSGI--DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGG- 489
Query: 456 LVKPNAFTLSCALMACARL-AALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDID 514
+KPN FT S L CA A++ G+Q H + ++++ + + V++ L+ MY++ G+I+
Sbjct: 490 -IKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLC-VSSALLTMYAKKGNIE 547
Query: 515 TARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACS 574
+A VF +++++VSW S+++GY HG KA F +M+K + DGVTF+ + AC+
Sbjct: 548 SAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACT 607
Query: 575 HSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIW 634
H+G+V++G KYFD M ++ I+ EH +C+VDL RA +L++A+++IE MP IW
Sbjct: 608 HAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIW 667
Query: 635 VALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHT 694
+L CR+H ELG LAA +++ ++ E +Y LLSN+YA +G W++ A++R LM
Sbjct: 668 RTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNER 727
Query: 695 GVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDV 754
VKK PG SW++ K T +F GDR+HP +IY L L R+K +GY P TS+ L D+
Sbjct: 728 NVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDI 787
Query: 755 DDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIIL 814
DDE K +L +HSE+LA+A+G++ T G+P+ I KNLR+CGDCH I I+ I EI++
Sbjct: 788 DDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVV 847
Query: 815 RDSNRFHHF-KEGSCTCKGYW 834
RDSNRFHHF +G C+C +W
Sbjct: 848 RDSNRFHHFSSDGVCSCGDFW 868
Score = 136 bits (343), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 184/366 (50%), Gaps = 28/366 (7%)
Query: 279 DVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVF 338
DV ++V Y + +F+D +F +M++ NV VTW+ +I+GYA+ E L +F
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV----VTWTTLISGYARNSMNDEVLTLF 182
Query: 339 RQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALI 398
+MQ G +PN T + L A G G + H +K L D + P V N+LI
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGL--DKTIP----VSNSLI 236
Query: 399 DMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVK 458
++Y KC +V AR++FD K+ V TW MI Y+ NG +AL +F M + V+
Sbjct: 237 NLYLKCGNVRKARILFDKTEVKS--VVTWNSMISGYAANGLDLEALGMFYSM--RLNYVR 292
Query: 459 PNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSR-SGDIDTAR 517
+ + + + CA L LRF Q+H V++ + + + L+ YS+ + +D R
Sbjct: 293 LSESSFASVIKLCANLKELRFTEQLHCSVVKYGF-LFDQNIRTALMVAYSKCTAMLDALR 351
Query: 518 VVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYA---CS 574
+ + NVVSWT++++G+ + ++A F +M+++G+ P+ T+ V+L A S
Sbjct: 352 LFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS 411
Query: 575 HSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIW 634
S + Q +K S G + ++D + +++EA ++ G+ + + W
Sbjct: 412 PSEVHAQVVKTNYERSSTVGTA--------LLDAYVKLGKVEEAAKVFSGID-DKDIVAW 462
Query: 635 VALLNG 640
A+L G
Sbjct: 463 SAMLAG 468
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 140/259 (54%), Gaps = 11/259 (4%)
Query: 317 TWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYT 376
++ +++ G+++ G EA +F + G+E + S+L A++ L G++ HC
Sbjct: 60 SYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQC 119
Query: 377 IKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQ 436
IK DD+ V +L+D Y K + R +FD + K R+V TWT +I Y++
Sbjct: 120 IKF------GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEM--KERNVVTWTTLISGYAR 171
Query: 437 NGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLI 496
N ++ L LF +M Q++ +PN+FT + AL A G Q+H V++N + I
Sbjct: 172 NSMNDEVLTLFMRM--QNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTI 229
Query: 497 PFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRK 556
P V+N LI++Y + G++ AR++FD + ++VV+W S+++GY +GL +A F MR
Sbjct: 230 P-VSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRL 288
Query: 557 EGLAPDGVTFLVLLYACSH 575
+ +F ++ C++
Sbjct: 289 NYVRLSESSFASVIKLCAN 307
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 3/163 (1%)
Query: 422 RDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGR 481
RD ++ ++ +S++G +A LF + + + + F S L A L FGR
Sbjct: 56 RDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIF--SSVLKVSATLCDELFGR 113
Query: 482 QIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMH 541
Q+H ++ + + V L+D Y + + R VFD +K+RNVV+WT+L++GY +
Sbjct: 114 QLHCQCIKFGFLDDVS-VGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARN 172
Query: 542 GLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLK 584
+ D+ F +M+ EG P+ TF L + G+ +GL+
Sbjct: 173 SMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 272/772 (35%), Positives = 417/772 (54%), Gaps = 109/772 (14%)
Query: 156 SVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQP----------GIC--- 202
+VH I + GF + N L+ +Y + L+YARQLFDE+ +P G C
Sbjct: 35 AVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASG 94
Query: 203 -----------------DIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVN 245
D V +N ++ ++ + D + LF +M + + D + +
Sbjct: 95 DITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHE-GFKPDNFTFAS 153
Query: 246 ALSACASLGTWSRGKQC---------------------------------GMMEEAKKVF 272
L+ A + KQC ++ A+KVF
Sbjct: 154 VLAGLALVA--DDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVF 211
Query: 273 ERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGH 332
+ + KD SW M+TGY + G F+ L + M +N+KL V ++A+I+GY RG
Sbjct: 212 DEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM-DDNMKL--VAYNAMISGYVNRGFYQ 268
Query: 333 EALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLM 392
EAL++ R+M G+E + T S++ CA+ G L LGK+ H Y ++R D S D
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE---DFSFHFD-- 323
Query: 393 VINALIDMYAKCKSVDVARVMFDAIAPKN-----------------------------RD 423
N+L+ +Y KC D AR +F+ + K+ ++
Sbjct: 324 --NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKN 381
Query: 424 VATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQI 483
+ +W +MI ++NG + L LF M ++ +P + S A+ +CA L A G+Q
Sbjct: 382 ILSWMIMISGLAENGFGEEGLKLFSCMKREG--FEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 484 HAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGL 543
HA +L+ ++ + N LI MY++ G ++ AR VF + + VSW +L+ G HG
Sbjct: 440 HAQLLKIGFDSSLS-AGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGH 498
Query: 544 GDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYA 603
G +A +++M K+G+ PD +T L +L ACSH+G+VDQG KYFDSM + I A+HYA
Sbjct: 499 GAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYA 558
Query: 604 CIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESE 663
++DLL R+ + +A +IE +P +PT IW ALL+GCR+H N+ELG +AA++L L E
Sbjct: 559 RLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPE 618
Query: 664 KDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQ 723
DG+Y LLSN++A G+W++VAR+R LM+ GVKK CSW++ + TF V D +HP+
Sbjct: 619 HDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPE 678
Query: 724 SQKIYEILAGLVQRIKAMGYVPQTSFALHDVD-DEEKGDLLFEHSEKLALAYGILTTAPG 782
++ +Y L L + ++ +GYVP TSF LHDV+ D K D+L HSEK+A+A+G++ PG
Sbjct: 679 AEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPG 738
Query: 783 TPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
T IRI KNLR CGDCH+ F+S ++ +IILRD RFHHF+ G C+C +W
Sbjct: 739 TTIRIFKNLRTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 151/564 (26%), Positives = 251/564 (44%), Gaps = 91/564 (16%)
Query: 73 LIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWH 132
+++ Y + + A + ++ +NA+I +A LF +M G+
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 133 PDEYTFPFVLKACGELP--SSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDT----L 186
PD +TF VL + +C HA SG V NAL+++Y++C + L
Sbjct: 146 PDNFTFASVLAGLALVADDEKQC-VQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 187 SYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVK----------- 235
AR++FDE+ + D SW T++ Y ++G + G L M ++K
Sbjct: 205 HSARKVFDEILEK---DERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGY 261
Query: 236 --------------------VQGDGVSLVNALSACASLGTWSRGKQ-------------- 261
++ D + + + ACA+ G GKQ
Sbjct: 262 VNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFSFH 321
Query: 262 -----------CGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQEN 310
CG +EA+ +FE+M KD+VSWNA+++GY G +A +FK+M+++
Sbjct: 322 FDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK- 380
Query: 311 VKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGK 370
N+++W +I+G A+ G G E L +F M+ G EP + CA +GA G+
Sbjct: 381 ---NILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQ 437
Query: 371 ETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVM 430
+ H +K + D S L NALI MYAKC V+ AR +F + D +W +
Sbjct: 438 QYHAQLLK--IGFDSS----LSAGNALITMYAKCGVVEEARQVFRTMPC--LDSVSWNAL 489
Query: 431 IGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRN 490
I + Q+G +A+ ++ +M + K ++P+ TL L AC+ + GR+ Y
Sbjct: 490 IAALGQHGHGAEAVDVYEEMLK--KGIRPDRITLLTVLTACSHAGLVDQGRK---YFDSM 544
Query: 491 QYEMLIPFVANC---LIDMYSRSGDIDTARVVFDNLKQRNVVS-WTSLMTGYGMHGLGDK 546
+ IP A+ LID+ RSG A V ++L + W +L++G +HG +
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMEL 604
Query: 547 AHWAFDQMRKEGLAP--DGVTFLV 568
A D++ GL P DG L+
Sbjct: 605 GIIAADKLF--GLIPEHDGTYMLL 626
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 145/321 (45%), Gaps = 27/321 (8%)
Query: 43 LLRQCKSLTQVYLIHQQIIVQNLTHVPPSHLIAAYVSHNAPSPALSLLQRISPSPFSVFW 102
L +C + I +++ ++L V + L++ YVS A + + + ++
Sbjct: 329 LYYKCGKFDEARAIFEKMPAKDL--VSWNALLSGYVSSGHIGEAKLIFKEMKEK--NILS 384
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVIC 162
W +I + +LF M R G+ P +Y F +K+C L + G HA +
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 163 SSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEG 222
GFDS++ NAL+ MYA+C + ARQ+F M P + D VSWN ++AA Q G
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTM--PCL-DSVSWNALIAALGQHGHGAE 501
Query: 223 GLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVS 282
+ ++ M ++ D ++L+ L+AC+ G++++ +K F+ M+ +
Sbjct: 502 AVDVYEEMLKK-GIRPDRITLLTVLTACS---------HAGLVDQGRKYFDSMETVYRIP 551
Query: 283 WNA-----MVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDV 337
A ++ R G F DA ++ + + K W A+++G R HG+ L +
Sbjct: 552 PGADHYARLIDLLCRSGKFSDAESVIESL---PFKPTAEIWEALLSGC--RVHGNMELGI 606
Query: 338 FRQMQFCGLEPNVVTLVSLLS 358
+ GL P LLS
Sbjct: 607 IAADKLFGLIPEHDGTYMLLS 627
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 481 bits (1238), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/716 (37%), Positives = 399/716 (55%), Gaps = 26/716 (3%)
Query: 120 FRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAM 179
+ F M+ D+ TF +L ++ S G VH + G D + V N+L+ M
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 180 YARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGD 239
Y + +AR +FD M + D++SWN+++A AQ+G + LF ++ ++ D
Sbjct: 360 YCKLRKFGFARTVFDNMSER---DLISWNSVIAGIAQNGLEVEAVCLFMQLL-RCGLKPD 415
Query: 240 GVSLVNALSACASLGT-WSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFED 298
++ + L A +SL S KQ + A K+ V D A++ YSR ++
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHV--HAIKI---NNVSDSFVSTALIDAYSRNRCMKE 470
Query: 299 AFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLS 358
A LF E ++V W+A++AGY Q GH+ L +F M G + TL ++
Sbjct: 471 AEILF-----ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFK 525
Query: 359 GCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIA 418
C + A+ GK+ H Y IK + DL V + ++DMY KC + A+ FD+I
Sbjct: 526 TCGFLFAINQGKQVHAYAIK------SGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI- 578
Query: 419 PKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALR 478
P DVA WT MI +NG A +F QM L P+ FT++ A + L AL
Sbjct: 579 PVPDDVA-WTTMISGCIENGEEERAFHVFSQMRLMGVL--PDEFTIATLAKASSCLTALE 635
Query: 479 FGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGY 538
GRQIHA L+ PFV L+DMY++ G ID A +F ++ N+ +W +++ G
Sbjct: 636 QGRQIHANALKLNCTN-DPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694
Query: 539 GMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISAR 598
HG G + F QM+ G+ PD VTF+ +L ACSHSG+V + K+ SM ++GI
Sbjct: 695 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Query: 599 AEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLL 658
EHY+C+ D LGRA + +A LIE M ME + ++ LL CR+ + E G+ A +LL
Sbjct: 755 IEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL 814
Query: 659 ELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGD 718
ELE +Y LLSN+YA A +W ++ R++MK VKK PG SW++ K F V D
Sbjct: 815 ELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDD 874
Query: 719 RTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILT 778
R++ Q++ IY + +++ IK GYVP+T F L DV++EEK L+ HSEKLA+A+G+L+
Sbjct: 875 RSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLS 934
Query: 779 TAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
T P TPIR+ KNLR+CGDCH+A+ +I+ + N EI+LRD+NRFH FK+G C+C YW
Sbjct: 935 TPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 176 bits (446), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 153/566 (27%), Positives = 251/566 (44%), Gaps = 93/566 (16%)
Query: 154 GSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAA 213
G HA I + + F+ N L++MY++C +L+YAR++FD+M D+VSWN+I+AA
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR---DLVSWNSILAA 114
Query: 214 YAQSGDA-----EGGLMLFARMTGDVKVQGDGVSLVNALSACASLG-TWS----RGKQC- 262
YAQS + + +LF + DV V ++L L C G W+ G C
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDV-VYTSRMTLSPMLKLCLHSGYVWASESFHGYACK 173
Query: 263 --------------------GMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFAL 302
G ++E K +FE M +DVV WN M+ Y +G E+A L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 303 FKKMRQENVKLNVVTWS--AVIAG--------------------------------YAQR 328
+ N +T A I+G Y
Sbjct: 234 SSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHS 293
Query: 329 GHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHP 388
G L F M +E + VT + +L+ V +L LG++ HC +K L
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL------- 346
Query: 389 DDLM--VINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALAL 446
DLM V N+LI+MY K + AR +FD ++ RD+ +W +I +QNG +A+ L
Sbjct: 347 -DLMLTVSNSLINMYCKLRKFGFARTVFDNMS--ERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 447 FPQMFQQDKLVKPNAFTLSCALMACARL-AALRFGRQIHAYVLRNQYEMLIPFVANCLID 505
F Q+ + +KP+ +T++ L A + L L +Q+H + ++ + FV+ LID
Sbjct: 404 FMQLLRCG--LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKIN-NVSDSFVSTALID 460
Query: 506 MYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVT 565
YSR+ + A ++F+ ++V+W ++M GY G K F M K+G D T
Sbjct: 461 AYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFT 519
Query: 566 FLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGM 625
+ C ++QG K + + + G + I+D+ + + A + +
Sbjct: 520 LATVFKTCGFLFAINQG-KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 626 PMEPTPIIWVALLNGCRIHANVELGE 651
P+ P + W +++GC +E GE
Sbjct: 579 PV-PDDVAWTTMISGC-----IENGE 598
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/455 (27%), Positives = 191/455 (41%), Gaps = 91/455 (20%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSS---VHA 159
WN++I + L A LF+Q++R G PD+YT VLKA LP S VHA
Sbjct: 384 WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHA 443
Query: 160 VICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGD 219
+ ++ DS FV AL+ Y+R + A LF+ D+V+WN ++A Y QS D
Sbjct: 444 IKINNVSDS--FVSTALIDAYSRNRCMKEAEILFER----HNFDLVAWNAMMAGYTQSHD 497
Query: 220 AEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQ------------------ 261
L LFA M + + D +L C L ++GKQ
Sbjct: 498 GHKTLKLFALMHKQGE-RSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 556
Query: 262 --------CGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKL 313
CG M A+ F+ + V D V+W M++G G E AF +F +MR
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMR------ 610
Query: 314 NVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETH 373
G+ P+ T+ +L + + AL G++ H
Sbjct: 611 -----------------------------LMGVLPDEFTIATLAKASSCLTALEQGRQIH 641
Query: 374 CYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGS 433
+K + +D V +L+DMYAKC S+D A +F I N + W M+
Sbjct: 642 ANALKL------NCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMN--ITAWNAMLVG 693
Query: 434 YSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLA----ALRFGRQIHA-YVL 488
+Q+G + L LF QM + +KP+ T L AC+ A + R +H Y +
Sbjct: 694 LAQHGEGKETLQLFKQM--KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGI 751
Query: 489 RNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNL 523
+ + E +CL D R+G + A + +++
Sbjct: 752 KPEIEHY-----SCLADALGRAGLVKQAENLIESM 781
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 161/334 (48%), Gaps = 19/334 (5%)
Query: 32 TTTPCIKITSLLLRQCKSLTQVYLIHQQIIVQNLTH-VPPSHLIAAYVSHNAPSPALSLL 90
T T +K S L QV++ I + N++ + LI AY + A L
Sbjct: 418 TMTSVLKAASSLPEGLSLSKQVHV--HAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475
Query: 91 QRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPS 150
+R F + WNA++ + +LF M ++G D++T V K CG L +
Sbjct: 476 ER---HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFA 532
Query: 151 SRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTI 210
G VHA SG+D +++V + ++ MY +C +S A+ FD + P D V+W T+
Sbjct: 533 INQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP---DDVAWTTM 589
Query: 211 VAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKK 270
++ ++G+ E +F++M + V D ++ A + L +G+Q
Sbjct: 590 ISGCIENGEEERAFHVFSQMRL-MGVLPDEFTIATLAKASSCLTALEQGRQI-----HAN 643
Query: 271 VFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGH 330
+ D ++V Y++ GS +DA+ LFK++ +N+ W+A++ G AQ G
Sbjct: 644 ALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM----MNITAWNAMLVGLAQHGE 699
Query: 331 GHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVG 364
G E L +F+QM+ G++P+ VT + +LS C+ G
Sbjct: 700 GKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSG 733
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 16/209 (7%)
Query: 366 LLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVA 425
L+LGK TH R+L+ + +P+ + IN LI MY+KC S+ AR +FD + +RD+
Sbjct: 55 LMLGKCTHA----RILTFE-ENPERFL-INNLISMYSKCGSLTYARRVFDKMP--DRDLV 106
Query: 426 TWTVMIGSYSQNG-----GANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFG 480
+W ++ +Y+Q+ A LF ++ +QD +V + TLS L C +
Sbjct: 107 SWNSILAAYAQSSECVVENIQQAFLLF-RILRQD-VVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 481 RQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGM 540
H Y + + FVA L+++Y + G + +V+F+ + R+VV W ++ Y
Sbjct: 165 ESFHGYACKIGLDG-DEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 541 HGLGDKAHWAFDQMRKEGLAPDGVTFLVL 569
G ++A GL P+ +T +L
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 477 LRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMT 536
L G+ HA +L + E F+ N LI MYS+ G + AR VFD + R++VSW S++
Sbjct: 55 LMLGKCTHARILTFE-ENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILA 113
Query: 537 GYGMHGLG-----DKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSK 591
Y +A F +R++ + +T +L C HSG V + F +
Sbjct: 114 AYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV-WASESFHGYAC 172
Query: 592 EFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNG 640
+ G+ +V++ + ++ E L E MP ++W +L
Sbjct: 173 KIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV-VLWNLMLKA 220
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 479 bits (1234), Expect = e-134, Method: Compositional matrix adjust.
Identities = 254/710 (35%), Positives = 409/710 (57%), Gaps = 52/710 (7%)
Query: 157 VHAVICSSGFDSNVFVCNALMAMYARCD--TLSYARQLFDEMFQPGICDIVSWNTIVAAY 214
H + +G S+ + + L AM A +L YAR++FDE+ +P + +WNT++ AY
Sbjct: 49 THGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKP---NSFAWNTLIRAY 105
Query: 215 AQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFER 274
A D + F M + + + + + A A + + S G+ M V
Sbjct: 106 ASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVG-- 163
Query: 275 MKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEA 334
DV N+++ Y G + A +F +++++V V+W+++I G+ Q+G +A
Sbjct: 164 ---SDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV----VSWNSMINGFVQKGSPDKA 216
Query: 335 LDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVI 394
L++F++M+ ++ + VT+V +LS CA + L G++ Y + ++V+ L +
Sbjct: 217 LELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN------LTLA 270
Query: 395 NALIDMYAKCKSVDVARVMFDAIAPKN-----------------------------RDVA 425
NA++DMY KC S++ A+ +FDA+ K+ +D+
Sbjct: 271 NAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIV 330
Query: 426 TWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHA 485
W +I +Y QNG N+AL +F ++ Q K +K N TL L ACA++ AL GR IH+
Sbjct: 331 AWNALISAYEQNGKPNEALIVFHEL-QLQKNMKLNQITLVSTLSACAQVGALELGRWIHS 389
Query: 486 YVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGD 545
Y+ ++ M V + LI MYS+ GD++ +R VF+++++R+V W++++ G MHG G+
Sbjct: 390 YIKKHGIRMNF-HVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN 448
Query: 546 KAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACI 605
+A F +M++ + P+GVTF + ACSH+G+VD+ F M +GI +HYACI
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACI 508
Query: 606 VDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKD 665
VD+LGR+ L++AV+ IE MP+ P+ +W ALL C+IHAN+ L E+A RLLELE D
Sbjct: 509 VDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRND 568
Query: 666 GSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQ 725
G++ LLSNIYA G+W++V+ +R M+ TG+KK PGCS ++ F GD HP S+
Sbjct: 569 GAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSE 628
Query: 726 KIYEILAGLVQRIKAMGYVPQTSFALHDVDDEE-KGDLLFEHSEKLALAYGILTTAPGTP 784
K+Y L +++++K+ GY P+ S L +++EE K L HSEKLA+ YG+++T
Sbjct: 629 KVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKV 688
Query: 785 IRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
IR+ KNLR+CGDCHS IS + + EII+RD RFHHF+ G C+C +W
Sbjct: 689 IRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 230 bits (587), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 160/508 (31%), Positives = 257/508 (50%), Gaps = 56/508 (11%)
Query: 43 LLRQCKSLTQVYLIHQQIIVQNLTHVPPS----HLIAAYVSHNAPSPALSLLQRISPSPF 98
L+ +C SL Q+ H +I P S +AA S + A + I P P
Sbjct: 36 LIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEI-PKPN 94
Query: 99 SVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGW-HPDEYTFPFVLKACGELPSSRCGSSV 157
S F WN LIR P + FL M+ +P++YTFPF++KA E+ S G S+
Sbjct: 95 S-FAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSL 153
Query: 158 HAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQS 217
H + S S+VFV N+L+ Y C L A ++F + + D+VSWN+++ + Q
Sbjct: 154 HGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEK---DVVSWNSMINGFVQK 210
Query: 218 GDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQ---------------- 261
G + L LF +M + V+ V++V LSACA + G+Q
Sbjct: 211 GSPDKALELFKKMESE-DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTL 269
Query: 262 ----------CGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENV 311
CG +E+AK++F+ M+ KD V+W M+ GY+ +E A + M Q+
Sbjct: 270 ANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQK-- 327
Query: 312 KLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFC-GLEPNVVTLVSLLSGCASVGALLLGK 370
++V W+A+I+ Y Q G +EAL VF ++Q ++ N +TLVS LS CA VGAL LG+
Sbjct: 328 --DIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGR 385
Query: 371 ETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVM 430
H Y K + + + V +ALI MY+KC ++ +R +F+++ + RDV W+ M
Sbjct: 386 WIHSYIKKHGIRM------NFHVTSALIHMYSKCGDLEKSREVFNSV--EKRDVFVWSAM 437
Query: 431 IGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRN 490
IG + +G N+A+ +F +M Q+ VKPN T + AC+ + + + + +
Sbjct: 438 IGGLAMHGCGNEAVDMFYKM--QEANVKPNGVTFTNVFCACSHTGLVDEAESLF-HQMES 494
Query: 491 QYEMLIPFVAN--CLIDMYSRSGDIDTA 516
Y ++P + C++D+ RSG ++ A
Sbjct: 495 NYG-IVPEEKHYACIVDVLGRSGYLEKA 521
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 246/678 (36%), Positives = 408/678 (60%), Gaps = 23/678 (3%)
Query: 157 VHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQ 216
+HA + G + F+ L+ + +++ARQ+FD++ +P I WN I+ Y++
Sbjct: 40 IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRP---QIFPWNAIIRGYSR 96
Query: 217 SGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMK 276
+ + L++++ M +V D + + L AC+ L G+ +VF
Sbjct: 97 NNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMGRFV-----HAQVFRLGF 150
Query: 277 VKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALD 336
DV N ++ Y++ A +F+ + + +V+W+A+++ YAQ G EAL+
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLPLP--ERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 337 VFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINA 396
+F QM+ ++P+ V LVS+L+ + L G+ H +K L ++ PD L+ +N
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE---PDLLISLNT 265
Query: 397 LIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKL 456
MYAKC V A+++FD + K+ ++ W MI Y++NG A +A+ +F +M +D
Sbjct: 266 ---MYAKCGQVATAKILFDKM--KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD-- 318
Query: 457 VKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTA 516
V+P+ +++ A+ ACA++ +L R ++ YV R+ Y + F+++ LIDM+++ G ++ A
Sbjct: 319 VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDV-FISSALIDMFAKCGSVEGA 377
Query: 517 RVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHS 576
R+VFD R+VV W++++ GYG+HG +A + M + G+ P+ VTFL LL AC+HS
Sbjct: 378 RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHS 437
Query: 577 GMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVA 636
GMV +G +F+ M+ + I+ + +HYAC++DLLGRA LD+A E+I+ MP++P +W A
Sbjct: 438 GMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGA 496
Query: 637 LLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGV 696
LL+ C+ H +VELGE AA +L ++ G Y LSN+YA A W VA +R MK G+
Sbjct: 497 LLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGL 556
Query: 697 KKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDD 756
K GCSWV+ + F VGD++HP+ ++I + + R+K G+V +LHD++D
Sbjct: 557 NKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLND 616
Query: 757 EEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRD 816
EE + L HSE++A+AYG+++T GTP+RITKNLR C +CH+A IS +++ EI++RD
Sbjct: 617 EEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRD 676
Query: 817 SNRFHHFKEGSCTCKGYW 834
+NRFHHFK+G C+C YW
Sbjct: 677 TNRFHHFKDGVCSCGDYW 694
Score = 200 bits (509), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 145/487 (29%), Positives = 233/487 (47%), Gaps = 76/487 (15%)
Query: 95 PSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCG 154
P P +F WNA+IR R +A ++ M PD +TFP +LKAC L + G
Sbjct: 80 PRP-QIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG 138
Query: 155 SSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAY 214
VHA + GFD++VFV N L+A+YA+C L AR +F+ + P IVSW IV+AY
Sbjct: 139 RFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERT-IVSWTAIVSAY 197
Query: 215 AQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGK-------------- 260
AQ+G+ L +F++M + V+ D V+LV+ L+A L +G+
Sbjct: 198 AQNGEPMEALEIFSQMR-KMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIE 256
Query: 261 ------------QCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQ 308
+CG + AK +F++MK +++ WNAM++GY++ G +A +F +M
Sbjct: 257 PDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 309 ENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLL 368
++V+ + + ++ S +S CA VG+L
Sbjct: 317 KDVRPDTI-----------------------------------SITSAISACAQVGSLEQ 341
Query: 369 GKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWT 428
+ + Y + + DD+ + +ALIDM+AKC SV+ AR++FD +RDV W+
Sbjct: 342 ARSMYEYVGR------SDYRDDVFISSALIDMFAKCGSVEGARLVFDRTL--DRDVVVWS 393
Query: 429 VMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVL 488
MI Y +G A +A++L+ M + V PN T LMAC +R G +
Sbjct: 394 AMIVGYGLHGRAREAISLYRAM--ERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA 451
Query: 489 RNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLK-QRNVVSWTSLMTGYGMHGLGDKA 547
++ A C+ID+ R+G +D A V + Q V W +L++ H +
Sbjct: 452 DHKINPQQQHYA-CVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELG 510
Query: 548 HWAFDQM 554
+A Q+
Sbjct: 511 EYAAQQL 517
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 172/364 (47%), Gaps = 42/364 (11%)
Query: 22 LFTNIKLFSVTTTPCIKITSLLLRQCKSLTQVYL---IHQQII---------VQNLTHVP 69
+++N++L V+ P LL+ C L+ + + +H Q+ VQN
Sbjct: 106 MYSNMQLARVS--PDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQN----- 158
Query: 70 PSHLIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRR 129
LIA Y A ++ + + ++ W A++ + P A +F QM +
Sbjct: 159 --GLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKM 216
Query: 130 GWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYA 189
PD VL A L + G S+HA + G + + +L MYA+C ++ A
Sbjct: 217 DVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATA 276
Query: 190 RQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSA 249
+ LFD+M P +++ WN +++ YA++G A + +F M + V+ D +S+ +A+SA
Sbjct: 277 KILFDKMKSP---NLILWNAMISGYAKNGYAREAIDMFHEMI-NKDVRPDTISITSAISA 332
Query: 250 CASLGTWSRGKQCGMMEEAKKVFERMKVK----DVVSWNAMVTGYSRIGSFEDAFALFKK 305
CA Q G +E+A+ ++E + DV +A++ +++ GS E A +F +
Sbjct: 333 CA---------QVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDR 383
Query: 306 MRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGA 365
+V V WSA+I GY G EA+ ++R M+ G+ PN VT + LL C G
Sbjct: 384 TLDRDV----VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGM 439
Query: 366 LLLG 369
+ G
Sbjct: 440 VREG 443
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 261/640 (40%), Positives = 383/640 (59%), Gaps = 28/640 (4%)
Query: 203 DIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQC 262
D+ SWN+++A A+SGD+ L+ F+ M + + S A+ AC+SL GKQ
Sbjct: 40 DVFSWNSVIADLARSGDSAEALLAFSSMR-KLSLYPTRSSFPCAIKACSSLFDIFSGKQT 98
Query: 263 GMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVI 322
++ F D+ +A++ YS G EDA +K+ E K N+V+W+++I
Sbjct: 99 -----HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDA----RKVFDEIPKRNIVSWTSMI 149
Query: 323 AGYAQRGHGHEALDVFRQMQFC------GLEPNVVTLVSLLSGCASVGALLLGKETHCYT 376
GY G+ +A+ +F+ + + + + LVS++S C+ V A L + H +
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 377 IKRVLSVDGSHPDDLMVINALIDMYAKCKS--VDVARVMFDAIAPKNRDVATWTVMIGSY 434
IKR + V N L+D YAK V VAR +FD I K+R ++ ++ Y
Sbjct: 210 IKR------GFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDR--VSYNSIMSVY 261
Query: 435 SQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEM 494
+Q+G +N+A +F ++ + +K+V NA TLS L+A + ALR G+ IH V+R E
Sbjct: 262 AQSGMSNEAFEVFRRLVK-NKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 495 LIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQM 554
+ V +IDMY + G ++TAR FD +K +NV SWT+++ GYGMHG KA F M
Sbjct: 321 DV-IVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAM 379
Query: 555 RKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANR 614
G+ P+ +TF+ +L ACSH+G+ +G ++F++M FG+ EHY C+VDLLGRA
Sbjct: 380 IDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGF 439
Query: 615 LDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNI 674
L +A +LI+ M M+P IIW +LL CRIH NVEL E++ RL EL+S G Y LLS+I
Sbjct: 440 LQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHI 499
Query: 675 YANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGL 734
YA+AGRWKDV R+R +MK+ G+ K PG S ++ F +GD HPQ +KIYE LA L
Sbjct: 500 YADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAEL 559
Query: 735 VQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRIC 794
+++ GYV TS HDVD+EEK L HSEKLA+A+GI+ T PG+ + + KNLR+C
Sbjct: 560 NRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVC 619
Query: 795 GDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
DCH+ I IS I++ E ++RD+ RFHHFK+G C+C YW
Sbjct: 620 SDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 138/451 (30%), Positives = 223/451 (49%), Gaps = 31/451 (6%)
Query: 100 VFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHA 159
VF WN++I R A F M + +P +FP +KAC L G H
Sbjct: 41 VFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQ 100
Query: 160 VICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGD 219
G+ S++FV +AL+ MY+ C L AR++FDE+ + +IVSW +++ Y +G+
Sbjct: 101 QAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKR---NIVSWTSMIRGYDLNGN 157
Query: 220 AEGGLMLFARMTGDVKVQGDG-----VSLVNALSACASLGTWSRGKQCGMMEEAKK-VFE 273
A + LF + D D + LV+ +SAC SR G+ E V +
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISAC------SRVPAKGLTESIHSFVIK 211
Query: 274 RMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHE 333
R + V N ++ Y++ G E A+ +K+ + V + V+++++++ YAQ G +E
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGG--EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNE 269
Query: 334 ALDVFRQM-QFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLM 392
A +VFR++ + + N +TL ++L + GAL +GK H I+ L DD++
Sbjct: 270 AFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGL------EDDVI 323
Query: 393 VINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQ 452
V ++IDMY KC V+ AR FD + KN++V +WT MI Y +G A AL LFP M
Sbjct: 324 VGTSIIDMYCKCGRVETARKAFDRM--KNKNVRSWTAMIAGYGMHGHAAKALELFPAMI- 380
Query: 453 QDKLVKPNAFTLSCALMACARLAALRFG-RQIHAYVLRNQYEMLIPFVANCLIDMYSRSG 511
D V+PN T L AC+ G R +A R E + C++D+ R+G
Sbjct: 381 -DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYG-CMVDLLGRAG 438
Query: 512 DIDTARVVFDNLKQR-NVVSWTSLMTGYGMH 541
+ A + +K + + + W+SL+ +H
Sbjct: 439 FLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 173/342 (50%), Gaps = 18/342 (5%)
Query: 312 KLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKE 371
K +V +W++VIA A+ G EAL F M+ L P + + C+S+ + GK+
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 372 THCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMI 431
TH V G + D+ V +ALI MY+ C ++ AR +FD I PK R++ +WT MI
Sbjct: 98 THQQAF-----VFG-YQSDIFVSSALIVMYSTCGKLEDARKVFDEI-PK-RNIVSWTSMI 149
Query: 432 GSYSQNGGANDALALFPQMF----QQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYV 487
Y NG A DA++LF + D + ++ L + AC+R+ A IH++V
Sbjct: 150 RGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFV 209
Query: 488 LRNQYEMLIPFVANCLIDMYSRSGD--IDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGD 545
++ ++ + V N L+D Y++ G+ + AR +FD + ++ VS+ S+M+ Y G+ +
Sbjct: 210 IKRGFDRGVS-VGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSN 268
Query: 546 KAHWAFDQMRKEGLAP-DGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYAC 604
+A F ++ K + + +T +L A SHSG + G D + + G+
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTS 327
Query: 605 IVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHAN 646
I+D+ + R++ A + + M + W A++ G +H +
Sbjct: 328 IIDMYCKCGRVETARKAFDRMKNKNVR-SWTAMIAGYGMHGH 368
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 473 bits (1217), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/556 (42%), Positives = 345/556 (62%), Gaps = 16/556 (2%)
Query: 279 DVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVF 338
D+V N ++ Y++ GS E+A +F+KM Q + VTW+ +I+GY+Q +AL F
Sbjct: 94 DIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF----VTWTTLISGYSQHDRPCDALLFF 149
Query: 339 RQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALI 398
QM G PN TL S++ A+ G + H + +K ++ V +AL+
Sbjct: 150 NQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVK------CGFDSNVHVGSALL 203
Query: 399 DMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVK 458
D+Y + +D A+++FDA+ +N DV +W +I +++ G AL LF M + +
Sbjct: 204 DLYTRYGLMDDAQLVFDALESRN-DV-SWNALIAGHARRSGTEKALELFQGMLRDG--FR 259
Query: 459 PNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARV 518
P+ F+ + AC+ L G+ +HAY++++ E L+ F N L+DMY++SG I AR
Sbjct: 260 PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG-EKLVAFAGNTLLDMYAKSGSIHDARK 318
Query: 519 VFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGM 578
+FD L +R+VVSW SL+T Y HG G +A W F++MR+ G+ P+ ++FL +L ACSHSG+
Sbjct: 319 IFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 579 VDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALL 638
+D+G Y++ M K+ GI A HY +VDLLGRA L+ A+ IE MP+EPT IW ALL
Sbjct: 379 LDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALL 437
Query: 639 NGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKK 698
N CR+H N ELG AA + EL+ + G + +L NIYA+ GRW D AR+R MK +GVKK
Sbjct: 438 NACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKK 497
Query: 699 RPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEE 758
P CSWV+ + F D HPQ ++I ++ +IK +GYVP TS + VD +E
Sbjct: 498 EPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQE 557
Query: 759 KGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSN 818
+ L HSEK+ALA+ +L T PG+ I I KN+R+CGDCH+AI S ++ EII+RD+N
Sbjct: 558 REVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTN 617
Query: 819 RFHHFKEGSCTCKGYW 834
RFHHFK+G+C+CK YW
Sbjct: 618 RFHHFKDGNCSCKDYW 633
Score = 130 bits (327), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 164/354 (46%), Gaps = 40/354 (11%)
Query: 38 KITSLLLRQC---KSLTQVYLIHQQIIVQNLTH--VPPSHLIAAYVSHNAPSPALSLLQR 92
+ + LL++C K L Q ++H I+ H V + L+ Y + A + ++
Sbjct: 61 RFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEK 120
Query: 93 ISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSR 152
+ F W LI + P +A F QM+R G+ P+E+T V+KA
Sbjct: 121 MPQRDFVT--WTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 153 CGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVA 212
CG +H GFDSNV V +AL+ +Y R + A+ +FD + + VSWN ++A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESR---NDVSWNALIA 235
Query: 213 AYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGK------------ 260
+A+ E L LF M D + S + AC+S G +GK
Sbjct: 236 GHARRSGTEKALELFQGMLRD-GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 261 --------------QCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKM 306
+ G + +A+K+F+R+ +DVVSWN+++T Y++ G ++A F++M
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 307 RQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNV---VTLVSLL 357
R+ ++ N +++ +V+ + G E + M+ G+ P VT+V LL
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLL 408
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 261/724 (36%), Positives = 415/724 (57%), Gaps = 51/724 (7%)
Query: 141 VLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMA---MYARCDTLSYARQLFDEMF 197
+L C L S R +HA + G + + + L+ + + L YA +F +
Sbjct: 39 LLHNCKTLQSLRI---IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 198 QPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWS 257
+P +++ WNT+ +A S D L L+ M + + + + L +CA +
Sbjct: 96 EP---NLLIWNTMFRGHALSSDPVSALKLYVCMIS-LGLLPNSYTFPFVLKSCAKSKAFK 151
Query: 258 RGKQC--------------------------GMMEEAKKVFERMKVKDVVSWNAMVTGYS 291
G+Q G +E+A KVF++ +DVVS+ A++ GY+
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211
Query: 292 RIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVV 351
G E+A LF ++ ++V V+W+A+I+GYA+ G+ EAL++F+ M + P+
Sbjct: 212 SRGYIENAQKLFDEIPVKDV----VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDES 267
Query: 352 TLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVAR 411
T+V+++S CA G++ LG++ H + D +L ++NALID+Y+KC ++ A
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWI------DDHGFGSNLKIVNALIDLYSKCGELETAC 321
Query: 412 VMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMAC 471
+F+ + K DV +W +IG Y+ +AL LF +M + + PN T+ L AC
Sbjct: 322 GLFERLPYK--DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE--TPNDVTMLSILPAC 377
Query: 472 ARLAALRFGRQIHAYVLRNQYEML-IPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVS 530
A L A+ GR IH Y+ + + + LIDMY++ GDI+ A VF+++ +++ S
Sbjct: 378 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS 437
Query: 531 WTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMS 590
W +++ G+ MHG D + F +MRK G+ PD +TF+ LL ACSHSGM+D G F +M+
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT 497
Query: 591 KEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELG 650
+++ ++ + EHY C++DLLG + EA E+I M MEP +IW +LL C++H NVELG
Sbjct: 498 QDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELG 557
Query: 651 ELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEG 710
E A L+++E E GSY LLSNIYA+AGRW +VA+ R+L+ G+KK PGCS ++
Sbjct: 558 ESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSV 617
Query: 711 TATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKL 770
F +GD+ HP++++IY +L + ++ G+VP TS L ++++E K L HSEKL
Sbjct: 618 VHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKL 677
Query: 771 ALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTC 830
A+A+G+++T PGT + I KNLR+C +CH A IS I EII RD RFHHF++G C+C
Sbjct: 678 AIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSC 737
Query: 831 KGYW 834
YW
Sbjct: 738 NDYW 741
Score = 209 bits (532), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 165/572 (28%), Positives = 283/572 (49%), Gaps = 69/572 (12%)
Query: 43 LLRQCKSLTQVYLIHQQIIVQNL--THVPPSHLIAAYV--SHNAPSP-ALSLLQRISPSP 97
LL CK+L + +IH Q+I L T+ S LI + H P A+S+ + I
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP- 97
Query: 98 FSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSV 157
++ WN + R P +A +L++ M+ G P+ YTFPFVLK+C + + + G +
Sbjct: 98 -NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 158 HAVICSSGFDSNVFVCNALMAMYARC----------------DTLSY------------- 188
H + G D +++V +L++MY + D +SY
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 189 --ARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNA 246
A++LFDE+ + D+VSWN +++ YA++G+ + L LF M V+ D ++V
Sbjct: 217 ENAQKLFDEI---PVKDVVSWNAMISGYAETGNYKEALELFKDMM-KTNVRPDESTMVTV 272
Query: 247 LSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKM 306
+SACA G+ G+Q + + +K+ NA++ YS+ G E A LF+++
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIV-----NALIDLYSKCGELETACGLFERL 327
Query: 307 RQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGAL 366
++V ++W+ +I GY EAL +F++M G PN VT++S+L CA +GA+
Sbjct: 328 PYKDV----ISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 383
Query: 367 LLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVAT 426
+G+ H Y KR+ V + + +LIDMYAKC ++ A +F++I K+ +++
Sbjct: 384 DIGRWIHVYIDKRLKGVTNASS----LRTSLIDMYAKCGDIEAAHQVFNSILHKS--LSS 437
Query: 427 WTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAY 486
W MI ++ +G A+ + LF +M + ++P+ T L AC+ L GR I
Sbjct: 438 WNAMIFGFAMHGRADASFDLFSRMRKIG--IQPDDITFVGLLSACSHSGMLDLGRHIFR- 494
Query: 487 VLRNQYEMLIPFVAN--CLIDMYSRSGDIDTARVVFDNLKQR-NVVSWTSLMTGYGMHG- 542
+ Y+M P + + C+ID+ SG A + + ++ + V W SL+ MHG
Sbjct: 495 TMTQDYKM-TPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGN 553
Query: 543 --LGDKAHWAFDQMRKEGLAPDGVTFLVLLYA 572
LG+ +A + ++ E P L +YA
Sbjct: 554 VELGES--FAENLIKIEPENPGSYVLLSNIYA 583
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 468 bits (1203), Expect = e-130, Method: Compositional matrix adjust.
Identities = 289/886 (32%), Positives = 451/886 (50%), Gaps = 112/886 (12%)
Query: 44 LRQCKSLTQVYLIHQQIIVQNL--THVPPSHLIAAYVSHNAPSPALSLLQRISPSPFSVF 101
L +L ++ IH +I L + LI Y P+ +LS+ +R+SP+ +V+
Sbjct: 14 LSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK-NVY 72
Query: 102 WWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVI 161
WN++IR + L A + ++ PD+YTFP V+KAC L + G V+ I
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 162 CSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAE 221
GF+S++FV NAL+ MY+R L+ ARQ+FDEM + D+VSWN++++ Y+ G E
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEM---PVRDLVSWNSLISGYSSHGYYE 189
Query: 222 GGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGK--------------------- 260
L ++ + V D ++ + L A +L +G+
Sbjct: 190 EALEIYHELKNSWIVP-DSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGL 248
Query: 261 -----QCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNV 315
+ +A++VF+ M V+D VS+N M+ GY ++ E++ +F + + K ++
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFKPDL 307
Query: 316 VTWSAVI---------------------AG--------------YAQRGHGHEALDVFRQ 340
+T S+V+ AG YA+ G A DVF
Sbjct: 308 LTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNS 367
Query: 341 MQ-------------------------------FCGLEPNVVTLVSLLSGCASVGALLLG 369
M+ + + +T + L+S + L G
Sbjct: 368 MECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFG 427
Query: 370 KETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTV 429
K H IK + + DL V NALIDMYAKC V + +F ++ D TW
Sbjct: 428 KGLHSNGIKSGICI------DLSVSNALIDMYAKCGEVGDSLKIFSSMG--TGDTVTWNT 479
Query: 430 MIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLR 489
+I + + G L + QM + + V P+ T L CA LAA R G++IH +LR
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSE--VVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR 537
Query: 490 NQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHW 549
YE + + N LI+MYS+ G ++ + VF+ + +R+VV+WT ++ YGM+G G+KA
Sbjct: 538 FGYESELQ-IGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALE 596
Query: 550 AFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLL 609
F M K G+ PD V F+ ++YACSHSG+VD+GL F+ M + I EHYAC+VDLL
Sbjct: 597 TFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLL 656
Query: 610 GRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYT 669
R+ ++ +A E I+ MP++P IW ++L CR ++E E + R++EL + G
Sbjct: 657 SRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSI 716
Query: 670 LLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYE 729
L SN YA +W V+ IR +K + K PG SW++ + F GD + PQS+ IY+
Sbjct: 717 LASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYK 776
Query: 730 ILAGLVQRIKAMGYVPQTSFALHDV-DDEEKGDLLFEHSEKLALAYGILTTAPGTPIRIT 788
L L + GY+P ++ ++EEK L+ HSE+LA+A+G+L T PGTP+++
Sbjct: 777 SLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVM 836
Query: 789 KNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
KNLR+CGDCH IS I+ EI++RD+NRFH FK+G+C+CK W
Sbjct: 837 KNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 249/660 (37%), Positives = 380/660 (57%), Gaps = 35/660 (5%)
Query: 176 LMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVK 235
++ Y R + L A LFDEM + D+VSWN++++ + GD + LF M
Sbjct: 72 MITGYTRSNRLVDALNLFDEM---PVRDVVSWNSMISGCVECGDMNTAVKLFDEMP---- 124
Query: 236 VQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGS 295
+ VS ++ C + G +++A+++F +M VKD +WN+MV GY + G
Sbjct: 125 -ERSVVSWTAMVNGCF---------RSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGK 174
Query: 296 FEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVS 355
+DA LFK+M +NV ++W+ +I G Q EALD+F+ M C ++
Sbjct: 175 VDDALKLFKQMPGKNV----ISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTC 230
Query: 356 LLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFD 415
+++ CA+ A +G + H IK + V +LI YA CK + +R +FD
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEE------YVSASLITFYANCKRIGDSRKVFD 284
Query: 416 AIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLA 475
+ VA WT ++ YS N DAL++F M + L PN T + L +C+ L
Sbjct: 285 EKV--HEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSIL--PNQSTFASGLNSCSALG 340
Query: 476 ALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLM 535
L +G+++H ++ E FV N L+ MYS SG+++ A VF + ++++VSW S++
Sbjct: 341 TLDWGKEMHGVAVKLGLET-DAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII 399
Query: 536 TGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFG- 594
G HG G A F QM + PD +TF LL ACSH G +++G K F MS
Sbjct: 400 VGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINH 459
Query: 595 ISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAA 654
I + +HY C+VD+LGR +L EA ELIE M ++P ++W+ALL+ CR+H++V+ GE AA
Sbjct: 460 IDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAA 519
Query: 655 NRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATF 714
+ L+S+ +Y LLSNIYA+AGRW +V+++R MK G+ K+PG SWV + F
Sbjct: 520 AAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEF 579
Query: 715 FVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAY 774
F GD+ P +IYE L L +++K +GY P ALHDV+DE+K ++L+ HSE+LA+A+
Sbjct: 580 FSGDQ--PHCSRIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAF 637
Query: 775 GILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
G++ T G+ + + KNLR+C DCH+ I IS ++ EI+LRD RFHHFK G+C+C YW
Sbjct: 638 GLINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 132 bits (333), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 189/401 (47%), Gaps = 25/401 (6%)
Query: 265 MEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAG 324
++EA++VF ++ V + M+TGY+R DA LF +M +VV+W+++I+G
Sbjct: 51 IDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVR----DVVSWNSMISG 106
Query: 325 YAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVD 384
+ G + A+ +F +M E +VV+ ++++GC G + E Y +
Sbjct: 107 CVECGDMNTAVKLFDEMP----ERSVVSWTAMVNGCFRSGKVDQA-ERLFYQMP------ 155
Query: 385 GSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDAL 444
D N+++ Y + VD A +F + KN V +WT MI QN + +AL
Sbjct: 156 ---VKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKN--VISWTTMICGLDQNERSGEAL 210
Query: 445 ALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLI 504
LF M + +K + +C + ACA A G Q+H +++ + + +V+ LI
Sbjct: 211 DLFKNMLRC--CIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGF-LYEEYVSASLI 267
Query: 505 DMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGV 564
Y+ I +R VFD V WT+L++GY ++ + A F M + + P+
Sbjct: 268 TFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQS 327
Query: 565 TFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEG 624
TF L +CS G +D G K ++ + G+ A +V + + +++AV +
Sbjct: 328 TFASGLNSCSALGTLDWG-KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIK 386
Query: 625 MPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKD 665
+ + + + W +++ GC H + + +++ L E D
Sbjct: 387 I-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPD 426
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 162/362 (44%), Gaps = 22/362 (6%)
Query: 73 LIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWH 132
++ Y+ AL L +++ +V W +I + A LF M+R
Sbjct: 165 MVHGYLQFGKVDDALKLFKQMPGK--NVISWTTMICGLDQNERSGEALDLFKNMLRCCIK 222
Query: 133 PDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQL 192
F V+ AC P+ G VH +I GF +V +L+ YA C + +R++
Sbjct: 223 STSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKV 282
Query: 193 FDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACAS 252
FDE + W +++ Y+ + E L +F+ M + + + + + L++C++
Sbjct: 283 FDEKVHE---QVAVWTALLSGYSLNKKHEDALSIFSGMLRN-SILPNQSTFASGLNSCSA 338
Query: 253 LGTWSRGKQCGMMEEAKKVFERMKVK-DVVSWNAMVTGYSRIGSFEDAFALFKKMRQENV 311
LGT GK E V ++ ++ D N++V YS G+ DA ++F K+
Sbjct: 339 LGTLDWGK------EMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI----F 388
Query: 312 KLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKE 371
K ++V+W+++I G AQ G G A +F QM EP+ +T LLS C+ G L G++
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRK 448
Query: 372 THCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMI 431
Y + +D + ++D+ +C + A + + + K ++ W ++
Sbjct: 449 LFYYMSSGINHID----RKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEM-VWLALL 503
Query: 432 GS 433
+
Sbjct: 504 SA 505
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 473 RLAALRFGRQIHAYVLRNQYEMLIPFV-ANCLIDMYSRSGDIDTARVVFDNLKQRNVVSW 531
R A IH R+ + + + F LI + S ID AR VF+ + +V +
Sbjct: 11 RFRAFSISHVIHGKCYRS-FSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLY 69
Query: 532 TSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSK 591
T ++TGY A FD+M D V++ ++ C G ++ +K FD M +
Sbjct: 70 TKMITGYTRSNRLVDALNLFDEMP----VRDVVSWNSMISGCVECGDMNTAVKLFDEMPE 125
Query: 592 EFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNG 640
+S A C R+ ++D+A L MP++ T W ++++G
Sbjct: 126 RSVVSWTAMVNGCF-----RSGKVDQAERLFYQMPVKDTA-AWNSMVHG 168
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/736 (34%), Positives = 396/736 (53%), Gaps = 27/736 (3%)
Query: 100 VFWWNALIRRAVRLRLPDNAFRLFLQMMRR-GWHPDEYTFPFVLKACGELPSSRCGSSVH 158
VF +N L+R P ++ +F + + P+ T+ F + A R G +H
Sbjct: 83 VFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIH 142
Query: 159 AVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSG 218
G DS + + + ++ MY + + AR++FD M + D + WNT+++ Y ++
Sbjct: 143 GQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEK---DTILWNTMISGYRKNE 199
Query: 219 DAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVK 278
+ +F + + + D +L++ L A A L G Q + + V
Sbjct: 200 MYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYV- 258
Query: 279 DVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVF 338
++ YS+ G + ALF++ R K ++V ++A+I GY G +L +F
Sbjct: 259 ----LTGFISLYSKCGKIKMGSALFREFR----KPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 339 RQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALI 398
+++ G TLVSL+ G L+L H Y +K S V AL
Sbjct: 311 KELMLSGARLRSSTLVSLV---PVSGHLMLIYAIHGYCLKSNFLSHAS------VSTALT 361
Query: 399 DMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVK 458
+Y+K ++ AR +FD K+ + +W MI Y+QNG DA++LF +M Q
Sbjct: 362 TVYSKLNEIESARKLFDESPEKS--LPSWNAMISGYTQNGLTEDAISLFREM--QKSEFS 417
Query: 459 PNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARV 518
PN T++C L ACA+L AL G+ +H V +E I +V+ LI MY++ G I AR
Sbjct: 418 PNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSI-YVSTALIGMYAKCGSIAEARR 476
Query: 519 VFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGM 578
+FD + ++N V+W ++++GYG+HG G +A F +M G+ P VTFL +LYACSH+G+
Sbjct: 477 LFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGL 536
Query: 579 VDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALL 638
V +G + F+SM +G +HYAC+VD+LGRA L A++ IE M +EP +W LL
Sbjct: 537 VKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLL 596
Query: 639 NGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKK 698
CRIH + L + +L EL+ + G + LLSNI++ + A +R K + K
Sbjct: 597 GACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAK 656
Query: 699 RPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEE 758
PG + ++ E F GD++HPQ ++IYE L L +++ GY P+T ALHDV++EE
Sbjct: 657 APGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEE 716
Query: 759 KGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSN 818
+ ++ HSE+LA+A+G++ T PGT IRI KNLR+C DCH+ IS I I++RD+N
Sbjct: 717 RELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDAN 776
Query: 819 RFHHFKEGSCTCKGYW 834
RFHHFK+G C+C YW
Sbjct: 777 RFHHFKDGVCSCGDYW 792
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 461 bits (1185), Expect = e-128, Method: Compositional matrix adjust.
Identities = 230/553 (41%), Positives = 340/553 (61%), Gaps = 17/553 (3%)
Query: 286 MVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCG 345
++ YS +GS + A +F K R K + W+A+ GHG E L ++ +M G
Sbjct: 118 LIGMYSDLGSVDYARKVFDKTR----KRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIG 173
Query: 346 LEPNVVTLVSLLSGCA----SVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMY 401
+E + T +L C +V L+ GKE H + +R S SH + ++ L+DMY
Sbjct: 174 VESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS---SH---VYIMTTLVDMY 227
Query: 402 AKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNA 461
A+ VD A +F + +N V +W+ MI Y++NG A +AL F +M ++ K PN+
Sbjct: 228 ARFGCVDYASYVFGGMPVRN--VVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 462 FTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFD 521
T+ L ACA LAAL G+ IH Y+LR + ++P V + L+ MY R G ++ + VFD
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILP-VISALVTMYGRCGKLEVGQRVFD 344
Query: 522 NLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQ 581
+ R+VVSW SL++ YG+HG G KA F++M G +P VTF+ +L ACSH G+V++
Sbjct: 345 RMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEE 404
Query: 582 GLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGC 641
G + F++M ++ GI + EHYAC+VDLLGRANRLDEA ++++ M EP P +W +LL C
Sbjct: 405 GKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSC 464
Query: 642 RIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPG 701
RIH NVEL E A+ RL LE + G+Y LL++IYA A W +V R++ L++H G++K PG
Sbjct: 465 RIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPG 524
Query: 702 CSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGD 761
W++ + +F D +P ++I+ L L + +K GY+PQT L++++ EEK
Sbjct: 525 RCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKER 584
Query: 762 LLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFH 821
++ HSEKLALA+G++ T+ G PIRITKNLR+C DCH FIS + EI++RD NRFH
Sbjct: 585 IVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFH 644
Query: 822 HFKEGSCTCKGYW 834
FK G C+C YW
Sbjct: 645 RFKNGVCSCGDYW 657
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 167/365 (45%), Gaps = 48/365 (13%)
Query: 26 IKLFSVTTTPCIKITSLLLRQC---KSLTQVYLIHQQIIVQNLTHVP--PSHLIAAYVSH 80
I++ S ++P + LL+ C SL+ +H+ I+ P + LI Y
Sbjct: 66 IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDL 125
Query: 81 NAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPF 140
+ A + + +++ WNAL R + L+ +M R G D +T+ +
Sbjct: 126 GSVDYARKVFDKTRKR--TIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTY 183
Query: 141 VLKACGELPSSRC-------GSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLF 193
VLKAC +S C G +HA + G+ S+V++ L+ MYAR + YA +F
Sbjct: 184 VLKAC---VASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF 240
Query: 194 DEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQG-DGVSLVNALSACAS 252
M + ++VSW+ ++A YA++G A L F M + K + V++V+ L ACAS
Sbjct: 241 GGM---PVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACAS 297
Query: 253 LGTWSRGK--------------------------QCGMMEEAKKVFERMKVKDVVSWNAM 286
L +GK +CG +E ++VF+RM +DVVSWN++
Sbjct: 298 LAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSL 357
Query: 287 VTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQM-QFCG 345
++ Y G + A +F++M VT+ +V+ + G E +F M + G
Sbjct: 358 ISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHG 417
Query: 346 LEPNV 350
++P +
Sbjct: 418 IKPQI 422
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 155/356 (43%), Gaps = 56/356 (15%)
Query: 383 VDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGAND 442
+D D + LI MY+ SVD AR +FD + R + W + + + G +
Sbjct: 104 LDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT--RKRTIYVWNALFRALTLAGHGEE 161
Query: 443 ALALFPQMFQQDKLVKPNAFTLSCALMACA----RLAALRFGRQIHAYVLRNQYEMLIPF 498
L L+ +M + V+ + FT + L AC + L G++IHA++ R Y + +
Sbjct: 162 VLGLYWKMNRIG--VESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHV-Y 218
Query: 499 VANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE- 557
+ L+DMY+R G +D A VF + RNVVSW++++ Y +G +A F +M +E
Sbjct: 219 IMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRET 278
Query: 558 -GLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLD 616
+P+ VT + +L AC+ ++QG K G+ + + +V + GR +L+
Sbjct: 279 KDSSPNSVTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGKLE 337
Query: 617 -------------------------------EAVELIEGM---PMEPTPIIWVALLNGCR 642
+A+++ E M PTP+ +V++L C
Sbjct: 338 VGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACS 397
Query: 643 IHANVELGELAANRLLELESEKDG------SYTLLSNIYANAGRWKDVARIRSLMK 692
VE G+ RL E G Y + ++ A R + A++ M+
Sbjct: 398 HEGLVEEGK----RLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMR 449
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 93/212 (43%), Gaps = 11/212 (5%)
Query: 430 MIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLR 489
+I S + G A+ + Q P+ T ++ C ++L ++H ++L
Sbjct: 52 LIQSLCKEGKLKQAIRVLSQE------SSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 490 NQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHW 549
N + PF+A LI MYS G +D AR VFD ++R + W +L + G G++
Sbjct: 106 NGSDQ-DPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLG 164
Query: 550 AFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGL---KYFDSMSKEFGISARAEHYACIV 606
+ +M + G+ D T+ +L AC S L K + G S+ +V
Sbjct: 165 LYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLV 224
Query: 607 DLLGRANRLDEAVELIEGMPMEPTPIIWVALL 638
D+ R +D A + GMP+ + W A++
Sbjct: 225 DMYARFGCVDYASYVFGGMPVRNV-VSWSAMI 255
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 260/756 (34%), Positives = 399/756 (52%), Gaps = 77/756 (10%)
Query: 138 FPFVLKAC---GELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFD 194
+ +K C G SR +H I + F+ N ++ YA + +YAR++FD
Sbjct: 6 YSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFD 65
Query: 195 EMFQPGIC----------------------------DIVSWNTIVAAYAQSGDAEGGLML 226
+ QP + D V+WN ++ Y+ SG +
Sbjct: 66 RIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKA 125
Query: 227 FARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQ------------------------- 261
+ M D V+L+ L +S G S GKQ
Sbjct: 126 YNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYA 185
Query: 262 -CGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSA 320
G + +AKKVF + ++ V +N+++ G G EDA LF+ M +++V +W+A
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSV-----SWAA 240
Query: 321 VIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRV 380
+I G AQ G EA++ FR+M+ GL+ + S+L C +GA+ GK+ H I+
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT- 299
Query: 381 LSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGA 440
+ D + V +ALIDMY KCK + A+ +FD + KN V +WT M+ Y Q G A
Sbjct: 300 -----NFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN--VVSWTAMVVGYGQTGRA 352
Query: 441 NDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFV- 499
+A+ +F M Q + P+ +TL A+ ACA +++L G Q H + + LI +V
Sbjct: 353 EEAVKIFLDM--QRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG---LIHYVT 407
Query: 500 -ANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEG 558
+N L+ +Y + GDID + +F+ + R+ VSWT++++ Y G + FD+M + G
Sbjct: 408 VSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG 467
Query: 559 LAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEA 618
L PDGVT ++ ACS +G+V++G +YF M+ E+GI HY+C++DL R+ RL+EA
Sbjct: 468 LKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEA 527
Query: 619 VELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANA 678
+ I GMP P I W LL+ CR N+E+G+ AA L+EL+ YTLLS+IYA+
Sbjct: 528 MRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASK 587
Query: 679 GRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRI 738
G+W VA++R M+ VKK PG SW++ K +F D + P +IY L L +I
Sbjct: 588 GKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKI 647
Query: 739 KAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCH 798
GY P TSF HDV++ K +L HSE+LA+A+G++ G PIR+ KNLR+C DCH
Sbjct: 648 IDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCH 707
Query: 799 SAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
+A IS + EI++RD+ RFH FK+G+C+C +W
Sbjct: 708 NATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 154 bits (388), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 138/531 (25%), Positives = 225/531 (42%), Gaps = 112/531 (21%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRR-GWHPDEYTFPFVLKACGELPSSRCGSSVHAVI 161
WN LI L A + + MMR + T +LK G +H +
Sbjct: 106 WNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQV 165
Query: 162 CSSGFDSNVFVCNALMAMYARCDTLSYARQLFD--------------------------- 194
GF+S + V + L+ MYA +S A+++F
Sbjct: 166 IKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDAL 225
Query: 195 EMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQG---DGVSLVNALSACA 251
++F+ D VSW ++ AQ+G A+ + F M KVQG D + L AC
Sbjct: 226 QLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM----KVQGLKMDQYPFGSVLPACG 281
Query: 252 SLGTWSRGKQ--------------------------CGMMEEAKKVFERMKVKDVVSWNA 285
LG + GKQ C + AK VF+RMK K+VVSW A
Sbjct: 282 GLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTA 341
Query: 286 MVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCG 345
MV GY + G E+A + +F MQ G
Sbjct: 342 MVVGYGQTGRAEEA-----------------------------------VKIFLDMQRSG 366
Query: 346 LEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCK 405
++P+ TL +S CA+V +L G + H I L + V N+L+ +Y KC
Sbjct: 367 IDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGL------IHYVTVSNSLVTLYGKCG 420
Query: 406 SVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLS 465
+D + +F+ + RD +WT M+ +Y+Q G A + + LF +M Q +KP+ TL+
Sbjct: 421 DIDDSTRLFNEM--NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHG--LKPDGVTLT 476
Query: 466 CALMACARLAALRFGRQIHAYVLRNQYEMLIPFVAN--CLIDMYSRSGDIDTARVVFDNL 523
+ AC+R + G Q + ++ ++Y ++P + + C+ID++SRSG ++ A + +
Sbjct: 477 GVISACSRAGLVEKG-QRYFKLMTSEYG-IVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Query: 524 K-QRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRK-EGLAPDGVTFLVLLYA 572
+ + WT+L++ G + WA + + + + P G T L +YA
Sbjct: 535 PFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 175/385 (45%), Gaps = 70/385 (18%)
Query: 86 ALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKAC 145
AL L + + S W A+I+ + L A F +M +G D+Y F VL AC
Sbjct: 224 ALQLFRGMEKDSVS---WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPAC 280
Query: 146 GELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIV 205
G L + G +HA I + F +++V +AL+ MY +C L YA+ +FD M Q ++V
Sbjct: 281 GGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQK---NVV 337
Query: 206 SWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQ---- 261
SW +V Y Q+G AE + +F M + D +L A+SACA++ + G Q
Sbjct: 338 SWTAMVVGYGQTGRAEEAVKIFLDMQRS-GIDPDHYTLGQAISACANVSSLEEGSQFHGK 396
Query: 262 ----------------------CGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDA 299
CG ++++ ++F M V+D VSW AMV+ Y++ G +
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456
Query: 300 FALFKKMRQENVKLNVVTWSAVI-----AGYAQRGH----------------GHEA--LD 336
LF KM Q +K + VT + VI AG ++G GH + +D
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516
Query: 337 VFRQ-------MQFCG---LEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGS 386
+F + M+F P+ + +LLS C + G L +GK + + ++ +D
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGK----WAAESLIELDPH 572
Query: 387 HPDDLMVINALIDMYAKCKSVDVAR 411
HP +++++ K SV R
Sbjct: 573 HPAGYTLLSSIYASKGKWDSVAQLR 597
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 269/772 (34%), Positives = 409/772 (52%), Gaps = 31/772 (4%)
Query: 68 VPPSHLIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMM 127
V + +I+ +V S A L + +V W L+ R D AF+LF QM
Sbjct: 80 VSTNTMISGHVKTGDVSSARDLFDAMPDR--TVVTWTILMGWYARNSHFDEAFKLFRQMC 137
Query: 128 RRG--WHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVF--VCNALMAMYARC 183
R PD TF +L C + VHA GFD+N F V N L+ Y
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 184 DTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSL 243
L A LF+E+ + D V++NT++ Y + G + LF +M D +
Sbjct: 198 RRLDLACVLFEEIPEK---DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSD-FTF 253
Query: 244 VNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALF 303
L A L ++ G+Q + F R D N ++ YS+ + LF
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALS-VTTGFSR----DASVGNQILDFYSKHDRVLETRMLF 308
Query: 304 KKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASV 363
+M + L+ V+++ VI+ Y+Q +L FR+MQ G + ++LS A++
Sbjct: 309 DEMPE----LDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANL 364
Query: 364 GALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRD 423
+L +G++ HC + + + D L V N+L+DMYAKC+ + A ++F ++ R
Sbjct: 365 SSLQMGRQLHCQAL--LATADSI----LHVGNSLVDMYAKCEMFEEAELIFKSLP--QRT 416
Query: 424 VATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQI 483
+WT +I Y Q G L LF +M + ++ + T + L A A A+L G+Q+
Sbjct: 417 TVSWTALISGYVQKGLHGAGLKLFTKMRGSN--LRADQSTFATVLKASASFASLLLGKQL 474
Query: 484 HAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGL 543
HA+++R+ + F + L+DMY++ G I A VF+ + RN VSW +L++ + +G
Sbjct: 475 HAFIIRSG-NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD 533
Query: 544 GDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYA 603
G+ A AF +M + GL PD V+ L +L ACSH G V+QG +YF +MS +GI+ + +HYA
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYA 593
Query: 604 CIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESE 663
C++DLLGR R EA +L++ MP EP I+W ++LN CRIH N L E AA +L +E
Sbjct: 594 CMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKL 653
Query: 664 KDGS-YTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHP 722
+D + Y +SNIYA AG W+ V ++ M+ G+KK P SWV+ F D+THP
Sbjct: 654 RDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHP 713
Query: 723 QSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTTAPG 782
+I + L I+ GY P TS + DVD++ K + L HSE+LA+A+ +++T G
Sbjct: 714 NGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEG 773
Query: 783 TPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
PI + KNLR C DCH+AI IS I+ EI +RD++RFHHF EG C+C YW
Sbjct: 774 CPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 140/546 (25%), Positives = 238/546 (43%), Gaps = 92/546 (16%)
Query: 157 VHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQ 216
V A I +GFD++ N ++ R +S AR+++DEM + VS NT+++ + +
Sbjct: 35 VDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHK---NTVSTNTMISGHVK 91
Query: 217 SGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERM- 275
+GD LF D + ++ +G ++R +EA K+F +M
Sbjct: 92 TGDVSSARDLF-----------DAMPDRTVVTWTILMGWYARNSH---FDEAFKLFRQMC 137
Query: 276 ------------------KVKDVVSWNA------------------------MVTGYSRI 293
D V NA ++ Y +
Sbjct: 138 RSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEV 197
Query: 294 GSFEDAFALFKKM-RQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVT 352
+ A LF+++ +++V N + I GY + G E++ +F +M+ G +P+ T
Sbjct: 198 RRLDLACVLFEEIPEKDSVTFNTL-----ITGYEKDGLYTESIHLFLKMRQSGHQPSDFT 252
Query: 353 LVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARV 412
+L + LG++ H ++ S D S V N ++D Y+K V R+
Sbjct: 253 FSGVLKAVVGLHDFALGQQLHALSVTTGFSRDAS------VGNQILDFYSKHDRVLETRM 306
Query: 413 MFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQM--FQQDKLVKPNAFTLSCALMA 470
+FD + D ++ V+I SYSQ +L F +M D+ P A LS A
Sbjct: 307 LFDEMP--ELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIA--- 361
Query: 471 CARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVS 530
A L++L+ GRQ+H L + ++ V N L+DMY++ + A ++F +L QR VS
Sbjct: 362 -ANLSSLQMGRQLHCQALLATADSIL-HVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVS 419
Query: 531 WTSLMTGY---GMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFD 587
WT+L++GY G+HG G K F +MR L D TF +L A + + G K
Sbjct: 420 WTALISGYVQKGLHGAGLK---LFTKMRGSNLRADQSTFATVLKASASFASLLLG-KQLH 475
Query: 588 SMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANV 647
+ G + +VD+ + + +AV++ E MP + + W AL++ HA+
Sbjct: 476 AFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMP-DRNAVSWNALISA---HADN 531
Query: 648 ELGELA 653
GE A
Sbjct: 532 GDGEAA 537
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 452 bits (1163), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/670 (36%), Positives = 388/670 (57%), Gaps = 42/670 (6%)
Query: 167 DSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLML 226
D N+ N L++ Y + + AR++FD M + ++VSW +V Y +G + L
Sbjct: 76 DRNIISWNGLVSGYMKNGEIDEARKVFDLMPER---NVVSWTALVKGYVHNGKVDVAESL 132
Query: 227 FARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAM 286
F +M KV V L+ L Q G +++A K++E + KD ++ +M
Sbjct: 133 FWKMPEKNKVSWT-VMLIGFL-------------QDGRIDDACKLYEMIPDKDNIARTSM 178
Query: 287 VTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGL 346
+ G + G ++A +F +M + +V +TW+ ++ GY Q +A +F M
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARKIFDVMP---- 230
Query: 347 EPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKS 406
E V+ S+L G G + +E + V P ++ NA+I +
Sbjct: 231 EKTEVSWTSMLMGYVQNGRIEDAEE--------LFEVMPVKP--VIACNAMISGLGQKGE 280
Query: 407 VDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSC 466
+ AR +FD++ K R+ A+W +I + +NG +AL LF + Q + V+P TL
Sbjct: 281 IAKARRVFDSM--KERNDASWQTVIKIHERNGFELEALDLF--ILMQKQGVRPTFPTLIS 336
Query: 467 ALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQR 526
L CA LA+L G+Q+HA ++R Q+++ + +VA+ L+ MY + G++ ++++FD +
Sbjct: 337 ILSVCASLASLHHGKQVHAQLVRCQFDVDV-YVASVLMTMYIKCGELVKSKLIFDRFPSK 395
Query: 527 NVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEG-LAPDGVTFLVLLYACSHSGMVDQGLKY 585
+++ W S+++GY HGLG++A F +M G P+ VTF+ L ACS++GMV++GLK
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKI 455
Query: 586 FDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHA 645
++SM FG+ HYAC+VD+LGRA R +EA+E+I+ M +EP +W +LL CR H+
Sbjct: 456 YESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHS 515
Query: 646 NVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWV 705
+++ E A +L+E+E E G+Y LLSN+YA+ GRW DVA +R LMK V+K PGCSW
Sbjct: 516 QLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWT 575
Query: 706 QGKEGTATFFVGD-RTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLF 764
+ + F G +HP+ + I +IL L ++ GY P S+ALHDVD+EEK + L
Sbjct: 576 EVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLK 635
Query: 765 EHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFK 824
HSE+LA+AY +L + G PIR+ KNLR+C DCH+AI IS + EIILRD+NRFHHF+
Sbjct: 636 YHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFR 695
Query: 825 EGSCTCKGYW 834
G C+CK YW
Sbjct: 696 NGECSCKDYW 705
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 174/413 (42%), Gaps = 87/413 (21%)
Query: 174 NALMAMYARCDTLSYARQLFDEMFQPGICD---IVSWNTIVAAYAQSGDAEGGLMLFARM 230
N + +R + AR+LFD CD I SWN++VA Y FA +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDS------CDSKSISSWNSMVAGY------------FANL 62
Query: 231 TGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGY 290
M +A+K+F+ M ++++SWN +V+GY
Sbjct: 63 ---------------------------------MPRDARKLFDEMPDRNIISWNGLVSGY 89
Query: 291 SRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNV 350
+ G ++A +F M + NVV+W+A++ GY G A +F +M E N
Sbjct: 90 MKNGEIDEARKVFDLMPER----NVVSWTALVKGYVHNGKVDVAESLFWKMP----EKNK 141
Query: 351 VTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPD-DLMVINALIDMYAKCKSVDV 409
V+ +L G G + + C + + PD D + ++I K VD
Sbjct: 142 VSWTVMLIGFLQDGRI----DDACKLYEMI-------PDKDNIARTSMIHGLCKEGRVDE 190
Query: 410 ARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALM 469
AR +FD ++ R V TWT M+ Y QN +DA +F M P +S M
Sbjct: 191 AREIFDEMS--ERSVITWTTMVTGYGQNNRVDDARKIFDVM--------PEKTEVSWTSM 240
Query: 470 ACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVV 529
+ ++ GR A L + N +I + G+I AR VFD++K+RN
Sbjct: 241 L---MGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDA 297
Query: 530 SWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQG 582
SW +++ + +G +A F M+K+G+ P T + +L C+ + G
Sbjct: 298 SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHG 350
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 120/268 (44%), Gaps = 23/268 (8%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVIC 162
W +I+ R A LF+ M ++G P T +L C L S G VHA +
Sbjct: 299 WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 163 SSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEG 222
FD +V+V + LM MY +C L ++ +FD DI+ WN+I++ YA G E
Sbjct: 359 RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSK---DIIMWNSIISGYASHGLGEE 415
Query: 223 GLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMK----VK 278
L +F M + + V+ V LSAC+ GM+EE K++E M+ VK
Sbjct: 416 ALKVFCEMPLSGSTKPNEVTFVATLSACS---------YAGMVEEGLKIYESMESVFGVK 466
Query: 279 DVVS-WNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDV 337
+ + + MV R G F +A + M V+ + W +++ A R H +
Sbjct: 467 PITAHYACMVDMLGRAGRFNEAMEMIDSM---TVEPDAAVWGSLLG--ACRTHSQLDVAE 521
Query: 338 FRQMQFCGLEP-NVVTLVSLLSGCASVG 364
F + +EP N T + L + AS G
Sbjct: 522 FCAKKLIEIEPENSGTYILLSNMYASQG 549
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 487 VLRNQYEMLIPF-VANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGD 545
+LR Y IP AN I SR G I AR +FD+ +++ SW S++ GY + +
Sbjct: 6 LLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPR 65
Query: 546 KAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACI 605
A FD+M + +++ L+ +G +D+ K FD M + +S + +
Sbjct: 66 DARKLFDEMPDRNI----ISWNGLVSGYMKNGEIDEARKVFDLMPERNVVS-----WTAL 116
Query: 606 VDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKD 665
V ++D A L MP E + W +L G ++ A +L E+ +KD
Sbjct: 117 VKGYVHNGKVDVAESLFWKMP-EKNKVSWTVMLIGFLQDGRID----DACKLYEMIPDKD 171
Query: 666 G 666
Sbjct: 172 N 172
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 449 bits (1156), Expect = e-125, Method: Compositional matrix adjust.
Identities = 261/752 (34%), Positives = 414/752 (55%), Gaps = 33/752 (4%)
Query: 86 ALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKAC 145
AL L ++ + F WN +I+ L A + + +M+ G D +T+PFV+K+
Sbjct: 83 ALQLFDEMNKA--DAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSV 140
Query: 146 GELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIV 205
+ S G +HA++ GF S+V+VCN+L+++Y + A ++F+EM + DIV
Sbjct: 141 AGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPER---DIV 197
Query: 206 SWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMM 265
SWN++++ Y GD LMLF M + D S ++AL AC+ + + GK+
Sbjct: 198 SWNSMISGYLALGDGFSSLMLFKEML-KCGFKPDRFSTMSALGACSHVYSPKMGKEI--- 253
Query: 266 EEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGY 325
V R++ DV+ +++ YS+ G A +F M Q N+ V W+ +I Y
Sbjct: 254 -HCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNI----VAWNVMIGCY 308
Query: 326 AQRGHGHEALDVFRQM-QFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVD 384
A+ G +A F++M + GL+P+V+T ++LL A+L G+ H Y ++R
Sbjct: 309 ARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRR----- 359
Query: 385 GSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDAL 444
G P +++ ALIDMY +C + A V+FD +A KN V +W +I +Y QNG AL
Sbjct: 360 GFLPH-MVLETALIDMYGECGQLKSAEVIFDRMAEKN--VISWNSIIAAYVQNGKNYSAL 416
Query: 445 ALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLI 504
LF +++ D + P++ T++ L A A +L GR+IHAY+++++Y + N L+
Sbjct: 417 ELFQELW--DSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRY-WSNTIILNSLV 473
Query: 505 DMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGV 564
MY+ GD++ AR F+++ ++VVSW S++ Y +HG G + W F +M + P+
Sbjct: 474 HMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKS 533
Query: 565 TFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEG 624
TF LL ACS SGMVD+G +YF+SM +E+GI EHY C++DL+GR A +E
Sbjct: 534 TFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEE 593
Query: 625 MPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDV 684
MP PT IW +LLN R H ++ + E AA ++ ++E + G Y LL N+YA AGRW+DV
Sbjct: 594 MPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDV 653
Query: 685 ARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMG-- 742
RI+ LM+ G+ + S V+ K + F GDR+H + KIYE+L +V R+
Sbjct: 654 NRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVL-DVVSRMVGEEDI 712
Query: 743 YVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAIT 802
YV S + + + + HS +LA +G+++T G + + N RIC CH +
Sbjct: 713 YVHCVSRLRPETLVKSRSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLE 772
Query: 803 FISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
S + EI++ DS FHHF G C+C YW
Sbjct: 773 KASRLTRREIVVGDSKIFHHFSNGRCSCGNYW 804
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 171/391 (43%), Gaps = 91/391 (23%)
Query: 264 MMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTW----- 318
+ME+A ++F+ M D WN M+ G++ G + +A + +M VK + T+
Sbjct: 79 LMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIK 138
Query: 319 ------------------------------SAVIAGYAQRGHGHEALDVFRQMQFCGLEP 348
+++I+ Y + G +A VF +M E
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP----ER 194
Query: 349 NVVTLVSLLSG-----------------------------------CASVGALLLGKETH 373
++V+ S++SG C+ V + +GKE H
Sbjct: 195 DIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIH 254
Query: 374 CYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGS 433
C+ ++ + D+MV+ +++DMY+K V A +F+ + +N + W VMIG
Sbjct: 255 CHAVRSRIET-----GDVMVMTSILDMYSKYGEVSYAERIFNGMIQRN--IVAWNVMIGC 307
Query: 434 YSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYE 493
Y++NG DA F +M +Q+ L +P+ T L A A L GR IH Y +R +
Sbjct: 308 YARNGRVTDAFLCFQKMSEQNGL-QPDVITSINLLPASAILE----GRTIHGYAMRRGF- 361
Query: 494 MLIP--FVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAF 551
+P + LIDMY G + +A V+FD + ++NV+SW S++ Y +G A F
Sbjct: 362 --LPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELF 419
Query: 552 DQMRKEGLAPDGVTFLVLLYACSHSGMVDQG 582
++ L PD T +L A + S + +G
Sbjct: 420 QELWDSSLVPDSTTIASILPAYAESLSLSEG 450
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 250/669 (37%), Positives = 384/669 (57%), Gaps = 41/669 (6%)
Query: 167 DSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLML 226
+ NV N L++ Y + + AR +F+ M + ++VSW +V Y Q G L
Sbjct: 76 ERNVVSWNGLVSGYIKNRMIVEARNVFELMPER---NVVSWTAMVKGYMQEGMVGEAESL 132
Query: 227 FARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAM 286
F RM N +S G G +++A+K+++ M VKDVV+ M
Sbjct: 133 FWRMPER-----------NEVSWTVMFGGLIDD---GRIDKARKLYDMMPVKDVVASTNM 178
Query: 287 VTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGL 346
+ G R G ++A +F +MR+ NV VTW+ +I GY Q +DV R++
Sbjct: 179 IGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNR----VDVARKLFEVMP 230
Query: 347 EPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKS 406
E V+ S+L G G + +E V P ++ NA+I + +
Sbjct: 231 EKTEVSWTSMLLGYTLSGRIEDAEE--------FFEVMPMKP--VIACNAMIVGFGEVGE 280
Query: 407 VDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSC 466
+ AR +FD + ++RD ATW MI +Y + G +AL LF QM +Q V+P+ +L
Sbjct: 281 ISKARRVFDLM--EDRDNATWRGMIKAYERKGFELEALDLFAQMQKQG--VRPSFPSLIS 336
Query: 467 ALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQR 526
L CA LA+L++GRQ+HA+++R Q++ + +VA+ L+ MY + G++ A++VFD +
Sbjct: 337 ILSVCATLASLQYGRQVHAHLVRCQFDDDV-YVASVLMTMYVKCGELVKAKLVFDRFSSK 395
Query: 527 NVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYF 586
+++ W S+++GY HGLG++A F +M G P+ VT + +L ACS++G +++GL+ F
Sbjct: 396 DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIF 455
Query: 587 DSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHAN 646
+SM +F ++ EHY+C VD+LGRA ++D+A+ELIE M ++P +W ALL C+ H+
Sbjct: 456 ESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSR 515
Query: 647 VELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQ 706
++L E+AA +L E E + G+Y LLS+I A+ +W DVA +R M+ V K PGCSW++
Sbjct: 516 LDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIE 575
Query: 707 GKEGTATFFVGD-RTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFE 765
+ F G + HP+ I +L ++ GY P S LHDVD+EEK D L
Sbjct: 576 VGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSR 635
Query: 766 HSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKE 825
HSE+LA+AYG+L G PIR+ KNLR+CGDCH+AI IS + EIILRD+NRFHHF
Sbjct: 636 HSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNN 695
Query: 826 GSCTCKGYW 834
G C+C+ YW
Sbjct: 696 GECSCRDYW 704
Score = 96.3 bits (238), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 102/227 (44%), Gaps = 21/227 (9%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVIC 162
W +I+ R A LF QM ++G P + +L C L S + G VHA +
Sbjct: 299 WRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358
Query: 163 SSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEG 222
FD +V+V + LM MY +C L A+ +FD DI+ WN+I++ YA G E
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK---DIIMWNSIISGYASHGLGEE 415
Query: 223 GLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVS 282
L +F M + V+L+ L+AC+ G +EE ++FE M+ K V+
Sbjct: 416 ALKIFHEMPSS-GTMPNKVTLIAILTACS---------YAGKLEEGLEIFESMESKFCVT 465
Query: 283 -----WNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAG 324
++ V R G + A L + M +K + W A++
Sbjct: 466 PTVEHYSCTVDMLGRAGQVDKAMELIESM---TIKPDATVWGALLGA 509
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 111/259 (42%), Gaps = 33/259 (12%)
Query: 398 IDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLV 457
I ++ ++ AR FD++ K + +W ++ Y NG +A LF +M +++ +V
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKA--IGSWNSIVSGYFSNGLPKEARQLFDEMSERN-VV 80
Query: 458 KPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEML-----IPFVANCLIDMYSRSGD 512
N ++ R I RN +E++ + + A ++ Y + G
Sbjct: 81 SWNGL-----------VSGYIKNRMI--VEARNVFELMPERNVVSWTA--MVKGYMQEGM 125
Query: 513 IDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYA 572
+ A +F + +RN VSWT + G G DKA +D M D V ++
Sbjct: 126 VGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMP----VKDVVASTNMIGG 181
Query: 573 CSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPI 632
G VD+ FD M + ++ + ++ + NR+D A +L E MP E T +
Sbjct: 182 LCREGRVDEARLIFDEMRERNVVT-----WTTMITGYRQNNRVDVARKLFEVMP-EKTEV 235
Query: 633 IWVALLNGCRIHANVELGE 651
W ++L G + +E E
Sbjct: 236 SWTSMLLGYTLSGRIEDAE 254
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 63/261 (24%)
Query: 487 VLRNQYEMLIPFVANCLIDM--YSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLG 544
+LR Y L NC ++ SR G I+ AR FD+L+ + + SW S+++GY +GL
Sbjct: 7 ILRRTY--LTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLP 64
Query: 545 DKAHWAFDQMRKEG-------------------------LAPDG--VTFLVLLYACSHSG 577
+A FD+M + L P+ V++ ++ G
Sbjct: 65 KEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEG 124
Query: 578 MVDQGLKYFDSMSKEFGIS-----------ARAEHYACIVDL---------------LGR 611
MV + F M + +S R + + D+ L R
Sbjct: 125 MVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGLCR 184
Query: 612 ANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEK-DGSYTL 670
R+DEA + + M E + W ++ G R + V++ A +L E+ EK + S+T
Sbjct: 185 EGRVDEARLIFDEM-RERNVVTWTTMITGYRQNNRVDV----ARKLFEVMPEKTEVSWTS 239
Query: 671 LSNIYANAGRWKDVARIRSLM 691
+ Y +GR +D +M
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVM 260
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 449 bits (1155), Expect = e-125, Method: Compositional matrix adjust.
Identities = 263/717 (36%), Positives = 397/717 (55%), Gaps = 31/717 (4%)
Query: 122 LFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYA 181
L+ ++ R G + + F LK L + +H+ I G+DSN FV AL+ Y+
Sbjct: 133 LYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYS 192
Query: 182 RCDTLSYARQLFDEMFQPGIC-DIVSWNTIVAAYAQSGDAEGGLMLFA--RMTGDVKVQG 238
C ++ AR +F+ + +C DIV W IV+ Y ++G E L L + RM G
Sbjct: 193 VCGSVDSARTVFEGI----LCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG---FMP 245
Query: 239 DGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFED 298
+ + AL A LG + K ++ + V D ++ Y+++G D
Sbjct: 246 NNYTFDTALKASIGLGAFDFAKGV-----HGQILKTCYVLDPRVGVGLLQLYTQLGDMSD 300
Query: 299 AFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLS 358
AF +F +M K +VV WS +IA + Q G +EA+D+F +M+ + PN TL S+L+
Sbjct: 301 AFKVFNEMP----KNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILN 356
Query: 359 GCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIA 418
GCA LG++ H +K +D + V NALID+YAKC+ +D A +F ++
Sbjct: 357 GCAIGKCSGLGEQLHGLVVKVGFDLD------IYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 419 PKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALR 478
KN +W +I Y G A ++F + + V T S AL ACA LA++
Sbjct: 411 SKNE--VSWNTVIVGYENLGEGGKAFSMFREALRNQ--VSVTEVTFSSALGACASLASMD 466
Query: 479 FGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGY 538
G Q+H ++ + V+N LIDMY++ GDI A+ VF+ ++ +V SW +L++GY
Sbjct: 467 LGVQVHGLAIKTNNAKKVA-VSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 539 GMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISAR 598
HGLG +A D M+ P+G+TFL +L CS++G++DQG + F+SM ++ GI
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585
Query: 599 AEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLL 658
EHY C+V LLGR+ +LD+A++LIEG+P EP+ +IW A+L+ N E +A +L
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645
Query: 659 ELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGD 718
++ + + +Y L+SN+YA A +W +VA IR MK GVKK PG SW++ + F VG
Sbjct: 646 KINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGL 705
Query: 719 RTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILT 778
HP + I +L L + GYVP + L D+DDEEK L+ HSE+LALAYG++
Sbjct: 706 SDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVR 765
Query: 779 TAPG-TPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
I I KNLRIC DCHSA+ IS I+ ++++RD NRFHHF G C+C +W
Sbjct: 766 MPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 218/467 (46%), Gaps = 28/467 (5%)
Query: 73 LIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWH 132
LI AY + A ++ + I V W ++ V +++ +L M G+
Sbjct: 187 LINAYSVCGSVDSARTVFEGILCKDIVV--WAGIVSCYVENGYFEDSLKLLSCMRMAGFM 244
Query: 133 PDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQL 192
P+ YTF LKA L + VH I + + + V L+ +Y + +S A ++
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 193 FDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACAS 252
F+EM + D+V W+ ++A + Q+G + LF RM + V + +L + L+ CA
Sbjct: 305 FNEMPKN---DVVPWSFMIARFCQNGFCNEAVDLFIRMR-EAFVVPNEFTLSSILNGCAI 360
Query: 253 LGTWSRGKQCGMMEEAKKVFERMKVK-DVVSWNAMVTGYSRIGSFEDAFALFKKMRQENV 311
GK G+ E+ + ++ D+ NA++ Y++ + A LF ++ +
Sbjct: 361 ------GKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK-- 412
Query: 312 KLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKE 371
N V+W+ VI GY G G +A +FR+ + VT S L CAS+ ++ LG +
Sbjct: 413 --NEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQ 470
Query: 372 THCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMI 431
H IK ++ + V N+LIDMYAKC + A+ +F+ + + DVA+W +I
Sbjct: 471 VHGLAIKT------NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM--ETIDVASWNALI 522
Query: 432 GSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQ 491
YS +G AL + M +D+ KPN T L C+ + G++ ++R+
Sbjct: 523 SGYSTHGLGRQALRILDIM--KDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDH 580
Query: 492 YEMLIPFVANCLIDMYSRSGDIDTARVVFDNLK-QRNVVSWTSLMTG 537
C++ + RSG +D A + + + + +V+ W ++++
Sbjct: 581 GIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSA 627
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 165/336 (49%), Gaps = 20/336 (5%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVIC 162
W+ +I R + + A LF++M P+E+T +L C S G +H ++
Sbjct: 316 WSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375
Query: 163 SSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEG 222
GFD +++V NAL+ +YA+C+ + A +LF E+ + VSWNT++ Y G+
Sbjct: 376 KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSK---NEVSWNTVIVGYENLGEGGK 432
Query: 223 GLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVS 282
+F R +V V+ +AL ACASL + G Q + + K V
Sbjct: 433 AFSMF-REALRNQVSVTEVTFSSALGACASLASMDLGVQVHGL-----AIKTNNAKKVAV 486
Query: 283 WNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQ 342
N+++ Y++ G + A ++F +M ++V +W+A+I+GY+ G G +AL + M+
Sbjct: 487 SNSLIDMYAKCGDIKFAQSVFNEMET----IDVASWNALISGYSTHGLGRQALRILDIMK 542
Query: 343 FCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYA 402
+PN +T + +LSGC++ G + G+E C+ + ++ G P L ++ +
Sbjct: 543 DRDCKPNGLTFLGVLSGCSNAGLIDQGQE--CF--ESMIRDHGIEP-CLEHYTCMVRLLG 597
Query: 403 KCKSVDVARVMFDAIAPKNRDVATWTVMI-GSYSQN 437
+ +D A + + I P V W M+ S +QN
Sbjct: 598 RSGQLDKAMKLIEGI-PYEPSVMIWRAMLSASMNQN 632
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 15/226 (6%)
Query: 355 SLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMF 414
++L C + K HC +K+ +D L N L++ Y K A +F
Sbjct: 54 AMLRRCIQKNDPISAKAIHCDILKKGSCLD------LFATNILLNAYVKAGFDKDALNLF 107
Query: 415 DAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARL 474
D + +N V + +Q D + L+ ++ ++ + P+ FT L L
Sbjct: 108 DEMPERN------NVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLF--VSL 159
Query: 475 AALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSL 534
+H+ +++ Y+ FV LI+ YS G +D+AR VF+ + +++V W +
Sbjct: 160 DKAEICPWLHSPIVKLGYDS-NAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGI 218
Query: 535 MTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVD 580
++ Y +G + + MR G P+ TF L A G D
Sbjct: 219 VSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFD 264
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 224/575 (38%), Positives = 352/575 (61%), Gaps = 16/575 (2%)
Query: 261 QCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSA 320
+CG + +A+KVF+ M +D+ SWN MV GY+ +G E+A LF +M +++ +W+A
Sbjct: 132 KCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDS----YSWTA 187
Query: 321 VIAGYAQRGHGHEALDVFRQMQFC-GLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKR 379
++ GY ++ EAL ++ MQ PN+ T+ ++ A+V + GKE H + ++
Sbjct: 188 MVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA 247
Query: 380 VLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGG 439
L D ++ ++L+DMY KC +D AR +FD I K DV +WT MI Y ++
Sbjct: 248 GLD------SDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK--DVVSWTSMIDRYFKSSR 299
Query: 440 ANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFV 499
+ +LF ++ + +PN +T + L ACA L G+Q+H Y+ R ++ F
Sbjct: 300 WREGFSLFSELVGSCE--RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPY-SFA 356
Query: 500 ANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGL 559
++ L+DMY++ G+I++A+ V D + ++VSWTSL+ G +G D+A FD + K G
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 560 APDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAV 619
PD VTF+ +L AC+H+G+V++GL++F S++++ +S ++HY C+VDLL R+ R ++
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLK 476
Query: 620 ELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAG 679
+I MPM+P+ +W ++L GC + N++L E AA L ++E E +Y ++NIYA AG
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536
Query: 680 RWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIK 739
+W++ ++R M+ GV KRPG SW + K F D +HP +I E L L +++K
Sbjct: 537 KWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMK 596
Query: 740 AMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHS 799
GYVP TS LHDV+DE+K + L HSEKLA+A+ IL+T GT I++ KNLR C DCH
Sbjct: 597 EEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIKVFKNLRSCVDCHG 656
Query: 800 AITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
AI FIS I +I +RDS RFH F+ G C+C YW
Sbjct: 657 AIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 150 bits (378), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 227/507 (44%), Gaps = 48/507 (9%)
Query: 120 FRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAM 179
R +Q++ R P T+ +++ C + + G VH I +SGF + + N L+ M
Sbjct: 70 LREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRM 129
Query: 180 YARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARM--------- 230
YA+C +L AR++FDEM +C SWN +V YA+ G E LF M
Sbjct: 130 YAKCGSLVDARKVFDEMPNRDLC---SWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWT 186
Query: 231 ---TGDVKVQGDGVSLV-------------NALSACASLGTWSRGKQCGMMEEAKKVFER 274
TG VK +LV N + ++ + K +E R
Sbjct: 187 AMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVR 246
Query: 275 MKV-KDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHE 333
+ D V W++++ Y + G ++A +F K+ V+ +VV+W+++I Y + E
Sbjct: 247 AGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI----VEKDVVSWTSMIDRYFKSSRWRE 302
Query: 334 ALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMV 393
+F ++ PN T +L+ CA + LGK+ H Y + RV G P
Sbjct: 303 GFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGY-MTRV----GFDPYSF-A 356
Query: 394 INALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQ 453
++L+DMY KC +++ A+ + D PK D+ +WT +IG +QNG ++AL F + +
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDG-CPKP-DLVSWTSLIGGCAQNGQPDEALKYFDLLLKS 414
Query: 454 DKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDI 513
KP+ T L AC + G + + CL+D+ +RSG
Sbjct: 415 G--TKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRF 472
Query: 514 DTARVVFDNLKQR-NVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDG-VTFLVLLY 571
+ + V + + + W S++ G +G D A A ++ K + P+ VT++ +
Sbjct: 473 EQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMAN 530
Query: 572 ACSHSGMVDQGLKYFDSMSKEFGISAR 598
+ +G ++ K M +E G++ R
Sbjct: 531 IYAAAGKWEEEGKMRKRM-QEIGVTKR 556
Score = 120 bits (302), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 156/325 (48%), Gaps = 41/325 (12%)
Query: 347 EPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKS 406
+P T +L+ C+ AL GK+ H + + G P +++ N L+ MYAKC S
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKKVHEH-----IRTSGFVPG-IVIWNRLLRMYAKCGS 135
Query: 407 VDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKL---------- 456
+ AR +FD + NRD+ +W VM+ Y++ G +A LF +M ++D
Sbjct: 136 LVDARKVFDEMP--NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYV 193
Query: 457 --------------------VKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLI 496
+PN FT+S A+ A A + +R G++IH +++R +
Sbjct: 194 KKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDS-D 252
Query: 497 PFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRK 556
+ + L+DMY + G ID AR +FD + +++VVSWTS++ Y + F ++
Sbjct: 253 EVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVG 312
Query: 557 EGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLD 616
P+ TF +L AC+ + G + M++ G + + +VD+ + ++
Sbjct: 313 SCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYTKCGNIE 371
Query: 617 EAVELIEGMPMEPTPIIWVALLNGC 641
A +++G P +P + W +L+ GC
Sbjct: 372 SAKHVVDGCP-KPDLVSWTSLIGGC 395
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 187/424 (44%), Gaps = 31/424 (7%)
Query: 35 PCIKITSLLLR---QCKSLTQVYLIHQQIIVQNLTHVPPSHLIAAYVSHNAPSPALSLLQ 91
P I I + LLR +C SL + ++ ++L + ++ Y A L
Sbjct: 118 PGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDL--CSWNVMVNGYAEVGLLEEARKLFD 175
Query: 92 RISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMR-RGWHPDEYTFPFVLKACGELPS 150
++ + W A++ V+ P+ A L+ M R P+ +T + A +
Sbjct: 176 EMTEK--DSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKC 233
Query: 151 SRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTI 210
R G +H I +G DS+ + ++LM MY +C + AR +FD++ + D+VSW ++
Sbjct: 234 IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK---DVVSWTSM 290
Query: 211 VAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQC-GMMEEAK 269
+ Y +S G LF+ + G + + + + L+ACA L T GKQ G M +
Sbjct: 291 IDRYFKSSRWREGFSLFSELVGSCE-RPNEYTFAGVLNACADLTTEELGKQVHGYM--TR 347
Query: 270 KVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRG 329
F+ +++V Y++ G+ E A K + K ++V+W+++I G AQ G
Sbjct: 348 VGFDPYSFAS----SSLVDMYTKCGNIESA----KHVVDGCPKPDLVSWTSLIGGCAQNG 399
Query: 330 HGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKE-THCYTIKRVLSVDGSHP 388
EAL F + G +P+ VT V++LS C G + G E + T K LS H
Sbjct: 400 QPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDH- 458
Query: 389 DDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFP 448
L+D+ A+ + + + + P W ++G S G + A
Sbjct: 459 -----YTCLVDLLARSGRFEQLKSVISEM-PMKPSKFLWASVLGGCSTYGNIDLAEEAAQ 512
Query: 449 QMFQ 452
++F+
Sbjct: 513 ELFK 516
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 16/267 (5%)
Query: 100 VFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHA 159
V W ++I R + F LF +++ P+EYTF VL AC +L + G VH
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 160 VICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGD 219
+ GFD F ++L+ MY +C + A+ + D +P D+VSW +++ AQ+G
Sbjct: 344 YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKP---DLVSWTSLIGGCAQNGQ 400
Query: 220 AEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKD 279
+ L F + + D V+ VN LSAC G +G +E + E+ ++
Sbjct: 401 PDEALKYFDLLLKS-GTKPDHVTFVNVLSACTHAGLVEKG-----LEFFYSITEKHRLSH 454
Query: 280 VVS-WNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVF 338
+ +V +R G FE ++ +M + K W++V+ G + G+ A +
Sbjct: 455 TSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKF---LWASVLGGCSTYGNIDLAEEAA 511
Query: 339 RQMQFCGLEP-NVVTLVSLLSGCASVG 364
+++ +EP N VT V++ + A+ G
Sbjct: 512 QEL--FKIEPENPVTYVTMANIYAAAG 536
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 245/642 (38%), Positives = 376/642 (58%), Gaps = 36/642 (5%)
Query: 194 DEMFQPGICD-IVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACAS 252
D + +P D I N I+A +SGD +G L +F M + + SL+ +S
Sbjct: 50 DYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWN--SLLIGIS---- 103
Query: 253 LGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVK 312
K M EA ++F+ + D S+N M++ Y R +FE A + F +M ++
Sbjct: 104 -------KDPSRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDA- 155
Query: 313 LNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKET 372
+W+ +I GYA+RG +A ++F M +E N V+ +++SG G L K +
Sbjct: 156 ---ASWNTMITGYARRGEMEKARELFYSM----MEKNEVSWNAMISGYIECGDL--EKAS 206
Query: 373 HCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIG 432
H + + V V + A+I Y K K V++A MF + N+++ TW MI
Sbjct: 207 HFFKVAPVRGV--------VAWTAMITGYMKAKKVELAEAMFKDMTV-NKNLVTWNAMIS 257
Query: 433 SYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQY 492
Y +N D L LF M ++ ++PN+ LS AL+ C+ L+AL+ GRQIH V ++
Sbjct: 258 GYVENSRPEDGLKLFRAMLEEG--IRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTL 315
Query: 493 EMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFD 552
+ + + LI MY + G++ A +F+ +K+++VV+W ++++GY HG DKA F
Sbjct: 316 CNDVTALTS-LISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFR 374
Query: 553 QMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRA 612
+M + PD +TF+ +L AC+H+G+V+ G+ YF+SM +++ + + +HY C+VDLLGRA
Sbjct: 375 EMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRA 434
Query: 613 NRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLS 672
+L+EA++LI MP P ++ LL CR+H NVEL E AA +LL+L S+ Y L+
Sbjct: 435 GKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLA 494
Query: 673 NIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILA 732
NIYA+ RW+DVAR+R MK + V K PG SW++ + F DR HP+ I++ L
Sbjct: 495 NIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLK 554
Query: 733 GLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLR 792
L +++K GY P+ FALH+V++E+K LL HSEKLA+A+G + G+ I++ KNLR
Sbjct: 555 ELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKNLR 614
Query: 793 ICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
ICGDCH AI FIS I EII+RD+ RFHHFK+GSC+C YW
Sbjct: 615 ICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 196/417 (47%), Gaps = 37/417 (8%)
Query: 100 VFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHA 159
+F N +I R VR D A R+F M + + T+ +L + PS H
Sbjct: 61 IFPLNKIIARCVRSGDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMM--EAHQ 114
Query: 160 VICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGD 219
+ + + F N +++ Y R A+ FD M D SWNT++ YA+ G+
Sbjct: 115 LF-DEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRM---PFKDAASWNTMITGYARRGE 170
Query: 220 AEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKD 279
E LF M ++ + VS +S +CG +E+A F+ V+
Sbjct: 171 MEKARELFYSM-----MEKNEVSWNAMISGYI---------ECGDLEKASHFFKVAPVRG 216
Query: 280 VVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFR 339
VV+W AM+TGY + E A A+FK M V N+VTW+A+I+GY + + L +FR
Sbjct: 217 VVAWTAMITGYMKAKKVELAEAMFKDM---TVNKNLVTWNAMISGYVENSRPEDGLKLFR 273
Query: 340 QMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALID 399
M G+ PN L S L GC+ + AL LG++ H K L +D+ + +LI
Sbjct: 274 AMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLC------NDVTALTSLIS 327
Query: 400 MYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKP 459
MY KC + A +F+ + K +DV W MI Y+Q+G A+ AL LF +M D ++P
Sbjct: 328 MYCKCGELGDAWKLFEVM--KKKDVVAWNAMISGYAQHGNADKALCLFREMI--DNKIRP 383
Query: 460 NAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTA 516
+ T L+AC + G ++R+ P C++D+ R+G ++ A
Sbjct: 384 DWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEA 440
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 99/210 (47%), Gaps = 20/210 (9%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVIC 162
WNA+I V P++ +LF M+ G P+ L C EL + + G +H ++
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 163 SSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEG 222
S ++V +L++MY +C L A +LF+ M + D+V+WN +++ YAQ G+A+
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK---DVVAWNAMISGYAQHGNADK 368
Query: 223 GLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVV- 281
L LF M D K++ D ++ V L AC G++ FE M V+D
Sbjct: 369 ALCLFREMI-DNKIRPDWITFVAVLLAC---------NHAGLVNIGMAYFESM-VRDYKV 417
Query: 282 -----SWNAMVTGYSRIGSFEDAFALFKKM 306
+ MV R G E+A L + M
Sbjct: 418 EPQPDHYTCMVDLLGRAGKLEEALKLIRSM 447
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 445 bits (1144), Expect = e-124, Method: Compositional matrix adjust.
Identities = 250/732 (34%), Positives = 410/732 (56%), Gaps = 45/732 (6%)
Query: 118 NAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSG-FDSNVFVCNAL 176
+A ++F++ + G P++Y + V++AC G + +G F+S+V V +L
Sbjct: 149 DAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSL 208
Query: 177 MAMYARCD-TLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVK 235
+ M+ + + + A ++FD+M + ++V+W ++ Q G + F M
Sbjct: 209 IDMFVKGENSFENAYKVFDKMSE---LNVVTWTLMITRCMQMGFPREAIRFFLDMVLS-G 264
Query: 236 VQGDGVSLVNALSACASLGTWSRGKQ-------CGMMEEAKKVFERMKVKDVVSWNAMVT 288
+ D +L + SACA L S GKQ G++++ + S M
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE-----------CSLVDMYA 313
Query: 289 GYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGH-GHEALDVFRQMQFCG-L 346
S GS +D +F +M +V ++W+A+I GY + + EA+++F +M G +
Sbjct: 314 KCSADGSVDDCRKVFDRMEDHSV----MSWTALITGYMKNCNLATEAINLFSEMITQGHV 369
Query: 347 EPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKS 406
EPN T S C ++ +GK+ KR L+ + S V N++I M+ K
Sbjct: 370 EPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSS------VANSVISMFVKSDR 423
Query: 407 VDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSC 466
++ A+ F++++ KN + ++ + +N A L ++ +++ V +AFT +
Sbjct: 424 MEDAQRAFESLSEKN--LVSYNTFLDGTCRNLNFEQAFKLLSEITERELGV--SAFTFAS 479
Query: 467 ALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQR 526
L A + ++R G QIH+ V++ P V N LI MYS+ G IDTA VF+ ++ R
Sbjct: 480 LLSGVANVGSIRKGEQIHSQVVKLGLSCNQP-VCNALISMYSKCGSIDTASRVFNFMENR 538
Query: 527 NVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYF 586
NV+SWTS++TG+ HG + F+QM +EG+ P+ VT++ +L ACSH G+V +G ++F
Sbjct: 539 NVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHF 598
Query: 587 DSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHAN 646
+SM ++ I + EHYAC+VDLL RA L +A E I MP + ++W L CR+H+N
Sbjct: 599 NSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSN 658
Query: 647 VELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQ 706
ELG+LAA ++LEL+ + +Y LSNIYA AG+W++ +R MK + K GCSW++
Sbjct: 659 TELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIE 718
Query: 707 GKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGD----L 762
+ F+VGD HP + +IY+ L L+ IK GYVP T LH +++E L
Sbjct: 719 VGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERL 778
Query: 763 LFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHH 822
L++HSEK+A+A+G+++T+ P+R+ KNLR+CGDCH+A+ +IS + EI+LRD NRFHH
Sbjct: 779 LYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHH 838
Query: 823 FKEGSCTCKGYW 834
FK+G C+C YW
Sbjct: 839 FKDGKCSCNDYW 850
Score = 179 bits (454), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 153/576 (26%), Positives = 262/576 (45%), Gaps = 29/576 (5%)
Query: 76 AYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHP-D 134
A +S + PSPA ++ + + LI R + A M R G P D
Sbjct: 2 AMISFSFPSPAKLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMD 61
Query: 135 EYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFD 194
TF +LK+C R G VHA + + + + N+L+++Y++ + A +F+
Sbjct: 62 SVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFE 121
Query: 195 EMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLG 254
M + G D+VSW+ ++A Y +G + +F ++ + + + AC++
Sbjct: 122 TMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL-ELGLVPNDYCYTAVIRACSNSD 180
Query: 255 TWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSR-IGSFEDAFALFKKMRQENVKL 313
G+ FE DV +++ + + SFE+A+ +F KM + L
Sbjct: 181 FVGVGRVTLGFLMKTGHFE----SDVCVGCSLIDMFVKGENSFENAYKVFDKMSE----L 232
Query: 314 NVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETH 373
NVVTW+ +I Q G EA+ F M G E + TL S+ S CA + L LGK+ H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292
Query: 374 CYTIKRVLSVDGSHPDDLMVINALIDMYAKCK---SVDVARVMFDAIAPKNRDVATWTVM 430
+ I+ L D V +L+DMYAKC SVD R +FD + ++ V +WT +
Sbjct: 293 SWAIRSGLVDD--------VECSLVDMYAKCSADGSVDDCRKVFDRM--EDHSVMSWTAL 342
Query: 431 IGSYSQNGG-ANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLR 489
I Y +N A +A+ LF +M Q V+PN FT S A AC L+ R G+Q+ +
Sbjct: 343 ITGYMKNCNLATEAINLFSEMITQGH-VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Query: 490 NQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHW 549
VAN +I M+ +S ++ A+ F++L ++N+VS+ + + G + ++A
Sbjct: 402 RGLASNSS-VANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 550 AFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLL 609
++ + L TF LL ++ G + +G + + K G+S ++ +
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVK-LGLSCNQPVCNALISMY 519
Query: 610 GRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHA 645
+ +D A + M I W +++ G H
Sbjct: 520 SKCGSIDTASRVFNFME-NRNVISWTSMITGFAKHG 554
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 121/478 (25%), Positives = 218/478 (45%), Gaps = 83/478 (17%)
Query: 96 SPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGS 155
S +V W +I R +++ P A R FL M+ G+ D++T V AC EL + G
Sbjct: 230 SELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGK 289
Query: 156 SVHAVICSSGFDSNVFVCNALMAMYARCD---TLSYARQLFDEMFQPGICDIVSWNTIVA 212
+H+ SG +V +L+ MYA+C ++ R++FD M ++SW ++
Sbjct: 290 QLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHS---VMSWTALIT 344
Query: 213 AYAQSGD-AEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQC--------- 262
Y ++ + A + LF+ M V+ + + +A AC +L GKQ
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGL 404
Query: 263 -----------------GMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKK 305
ME+A++ FE + K++VS+N + G R +FE AF L +
Sbjct: 405 ASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSE 464
Query: 306 MRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGA 365
+ + + ++ T++++++G A+VG+
Sbjct: 465 ITERELGVSAFTFASLLSGV-----------------------------------ANVGS 489
Query: 366 LLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVA 425
+ G++ H +K LS + P V NALI MY+KC S+D A +F+ + +NR+V
Sbjct: 490 IRKGEQIHSQVVKLGLSCN--QP----VCNALISMYSKCGSIDTASRVFNFM--ENRNVI 541
Query: 426 TWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFG-RQIH 484
+WT MI ++++G A L F QM ++ VKPN T L AC+ + + G R +
Sbjct: 542 SWTSMITGFAKHGFAIRVLETFNQMIEEG--VKPNEVTYVAILSACSHVGLVSEGWRHFN 599
Query: 485 AYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLK-QRNVVSWTSLMTGYGMH 541
+ ++ + + A C++D+ R+G + A + + Q +V+ W + + +H
Sbjct: 600 SMYEDHKIKPKMEHYA-CMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVH 656
Score = 149 bits (376), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 142/524 (27%), Positives = 254/524 (48%), Gaps = 47/524 (8%)
Query: 198 QPGICDIVS-WNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTW 256
QP + + ++ + ++ + +GD G + M D D V+ + L +C
Sbjct: 19 QPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIR---- 74
Query: 257 SRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVV 316
+R + G + A+ + E D V +N++++ YS+ G A +F+ MR+ K +VV
Sbjct: 75 ARDFRLGKLVHAR-LIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG-KRDVV 132
Query: 317 TWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYT 376
+WSA++A Y G +A+ VF + GL PN +++ C++ + +G+ T +
Sbjct: 133 SWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFL 192
Query: 377 IKRVLSVDGSHPDDLMVINALIDMYAKCK-SVDVARVMFDAIAPKNRDVATWTVMIGSYS 435
+K G D+ V +LIDM+ K + S + A +FD ++ N V TWT+MI
Sbjct: 193 MK-----TGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELN--VVTWTLMITRCM 245
Query: 436 QNGGANDALALFPQM----FQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQ 491
Q G +A+ F M F+ DK FTLS ACA L L G+Q+H++ +R+
Sbjct: 246 QMGFPREAIRFFLDMVLSGFESDK------FTLSSVFSACAELENLSLGKQLHSWAIRSG 299
Query: 492 YEMLIPFVANCLIDMYSR---SGDIDTARVVFDNLKQRNVVSWTSLMTGYGMH-GLGDKA 547
L+ V L+DMY++ G +D R VFD ++ +V+SWT+L+TGY + L +A
Sbjct: 300 ---LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEA 356
Query: 548 HWAFDQMRKEG-LAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIV 606
F +M +G + P+ TF AC + G + K G+++ + ++
Sbjct: 357 INLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR-GLASNSSVANSVI 415
Query: 607 DLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKD- 665
+ +++R+++A E + E + + L+G + N E A +LL +E++
Sbjct: 416 SMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCRNLNFE----QAFKLLSEITEREL 470
Query: 666 --GSYT---LLSNIYANAGRWKDVARIRSLMKHTGVK-KRPGCS 703
++T LLS + AN G + +I S + G+ +P C+
Sbjct: 471 GVSAFTFASLLSGV-ANVGSIRKGEQIHSQVVKLGLSCNQPVCN 513
Score = 83.2 bits (204), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 109/234 (46%), Gaps = 15/234 (6%)
Query: 117 DNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNAL 176
+ AF+L ++ R +TF +L + S R G +H+ + G N VCNAL
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNAL 515
Query: 177 MAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKV 236
++MY++C ++ A ++F+ M +++SW +++ +A+ G A L F +M + V
Sbjct: 516 ISMYSKCGSIDTASRVFNFMENR---NVISWTSMITGFAKHGFAIRVLETFNQMIEE-GV 571
Query: 237 QGDGVSLVNALSACASLGTWSRG-KQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGS 295
+ + V+ V LSAC+ +G S G + M E K+ +M+ + MV R G
Sbjct: 572 KPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKME-----HYACMVDLLCRAGL 626
Query: 296 FEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPN 349
DAF M + +V+ W + A R H + L + L+PN
Sbjct: 627 LTDAFEFINTM---PFQADVLVWRTFLG--ACRVHSNTELGKLAARKILELDPN 675
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 441 bits (1133), Expect = e-122, Method: Compositional matrix adjust.
Identities = 255/709 (35%), Positives = 392/709 (55%), Gaps = 67/709 (9%)
Query: 133 PDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQL 192
P E F + + P R +VH+ I N + LM YA ++ AR++
Sbjct: 38 PQETVF-LLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKV 96
Query: 193 FDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACAS 252
FDE+ + +++ N ++ +Y +G G+ +F M G V+ D + L AC+
Sbjct: 97 FDEIPER---NVIIINVMIRSYVNNGFYGEGVKVFGTMCG-CNVRPDHYTFPCVLKACSC 152
Query: 253 LGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVK 312
GT G++ + A KV + N +V+ Y + G +A + +M + +V
Sbjct: 153 SGTIVIGRK--IHGSATKVGLS---STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDV- 206
Query: 313 LNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKET 372
V+W++++ GYAQ +AL+V R+M+ + + T+ SLL
Sbjct: 207 ---VSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLP-------------- 249
Query: 373 HCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIG 432
+V + +++M + DM+ K + + +W VMIG
Sbjct: 250 ---------AVSNTTTENVMYVK---DMFFKMG---------------KKSLVSWNVMIG 282
Query: 433 SYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQY 492
Y +N +A+ L+ +M + D +P+A +++ L AC +AL G++IH Y+ R +
Sbjct: 283 VYMKNAMPVEAVELYSRM-EADGF-EPDAVSITSVLPACGDTSALSLGKKIHGYIERKK- 339
Query: 493 EMLIP--FVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWA 550
LIP + N LIDMY++ G ++ AR VF+N+K R+VVSWT++++ YG G G A
Sbjct: 340 --LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVAL 397
Query: 551 FDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLG 610
F +++ GL PD + F+ L ACSH+G++++G F M+ + I+ R EH AC+VDLLG
Sbjct: 398 FSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLG 457
Query: 611 RANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTL 670
RA ++ EA I+ M MEP +W ALL CR+H++ ++G LAA++L +L E+ G Y L
Sbjct: 458 RAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVL 517
Query: 671 LSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEI 730
LSNIYA AGRW++V IR++MK G+KK PG S V+ TF VGDR+HPQS +IY
Sbjct: 518 LSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRE 577
Query: 731 LAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTTAP-----GTPI 785
L LV+++K +GYVP + ALHDV++E+K L HSEKLA+ + ++ T I
Sbjct: 578 LDVLVKKMKELGYVPDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTI 637
Query: 786 RITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
RITKNLRICGDCH A IS I + EII+RD+NRFH F+ G C+C YW
Sbjct: 638 RITKNLRICGDCHVAAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 151/520 (29%), Positives = 240/520 (46%), Gaps = 67/520 (12%)
Query: 56 IHQQIIVQNL--THVPPSHLIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRL 113
+H +II+++L L+ AY S + A + I +V N +IR V
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPER--NVIIINVMIRSYVNN 118
Query: 114 RLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVC 173
++F M PD YTFP VLKAC + G +H G S +FV
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVG 178
Query: 174 NALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGD 233
N L++MY +C LS AR + DEM + D+VSWN++V YAQ+ + L + M
Sbjct: 179 NGLVSMYGKCGFLSEARLVLDEMSRR---DVVSWNSLVVGYAQNQRFDDALEVCREMES- 234
Query: 234 VKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRI 293
VK+ D ++ + L A ++ T + + K +F +M K +VSWN M+ Y +
Sbjct: 235 VKISHDAGTMASLLPAVSNTTTEN-------VMYVKDMFFKMGKKSLVSWNVMIGVYMKN 287
Query: 294 GSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTL 353
+A L+ +M + G EP+ V++
Sbjct: 288 AMPVEAVELYSRMEAD-----------------------------------GFEPDAVSI 312
Query: 354 VSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVM 413
S+L C AL LGK+ H Y ++ L +L++ NALIDMYAKC ++ AR +
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKL------IPNLLLENALIDMYAKCGCLEKARDV 366
Query: 414 FDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACAR 473
F+ + K+RDV +WT MI +Y +G DA+ALF ++ QD + P++ L AC+
Sbjct: 367 FENM--KSRDVVSWTAMISAYGFSGRGCDAVALFSKL--QDSGLVPDSIAFVTTLAACSH 422
Query: 474 LAALRFGRQIHAYVLRNQYEMLIPFVAN--CLIDMYSRSGDIDTA-RVVFDNLKQRNVVS 530
L GR + L + + P + + C++D+ R+G + A R + D + N
Sbjct: 423 AGLLEEGRS--CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERV 480
Query: 531 WTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLL 570
W +L+ +H D A D++ + LAP+ + VLL
Sbjct: 481 WGALLGACRVHSDTDIGLLAADKLFQ--LAPEQSGYYVLL 518
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 250/776 (32%), Positives = 393/776 (50%), Gaps = 108/776 (13%)
Query: 154 GSSVHAVICSSGFD-SNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVA 212
G ++H + G D S+ V +A M Y RC +L +A +LFDEM + D ++WN IV
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKR---DDLAWNEIVM 62
Query: 213 AYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQC---------- 262
+SG+ E + LF M D ++V L C++ ++ G+Q
Sbjct: 63 VNLRSGNWEKAVELFREMQFSGAKAYDS-TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLE 121
Query: 263 ----------------GMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKM 306
G +E ++KVF MK +++ SWN++++ Y+++G +DA L +M
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 307 RQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGAL 366
+K ++VTW+++++GYA +G +A+ V ++MQ GL+P+ ++ SLL A G L
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Query: 367 LLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKN----- 421
LGK H Y ++ L D+ V LIDMY K + AR++FD + KN
Sbjct: 242 KLGKAIHGYILRNQLWY------DVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWN 295
Query: 422 ----------------------------RDVATWTVMIGSYSQNGGANDALALFPQMFQQ 453
D TW + Y+ G AL + +M +
Sbjct: 296 SLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM--K 353
Query: 454 DKLVKPNAFTLSCALMACAR-----------------------------------LAALR 478
+K V PN + + C++ L+ L
Sbjct: 354 EKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLH 413
Query: 479 FGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGY 538
G+++H + LR + +VA L+DMY +SGD+ +A +F +K +++ SW ++ GY
Sbjct: 414 SGKEVHGFCLRKNL-ICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGY 472
Query: 539 GMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISAR 598
M G G++ AF M + G+ PD +TF +L C +SG+V +G KYFD M +GI
Sbjct: 473 AMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPT 532
Query: 599 AEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLL 658
EH +C+VDLLGR+ LDEA + I+ M ++P IW A L+ C+IH ++EL E+A RL
Sbjct: 533 IEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQ 592
Query: 659 ELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGD 718
LE +Y ++ N+Y+N RW+DV RIR+LM++ V+ + SW+Q + F+
Sbjct: 593 VLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEG 652
Query: 719 RTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILT 778
+THP IY L LV +K GYVP TS D+ D EK LL H+EKLA+ YG++
Sbjct: 653 KTHPDEGDIYFELYKLVSEMKKSGYVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIK 712
Query: 779 TAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
PIR+ KN IC D H+ ++S++ N EI+L++ R HHF++G C+C W
Sbjct: 713 KKGLAPIRVVKNTNICSDSHTVAKYMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 437 bits (1123), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/550 (40%), Positives = 325/550 (59%), Gaps = 23/550 (4%)
Query: 290 YSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPN 349
Y + EDA + +M ++NV V+W+A+I+ Y+Q GH EAL VF +M +PN
Sbjct: 97 YGKCDCLEDARKVLDEMPEKNV----VSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPN 152
Query: 350 VVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDV 409
T ++L+ C L LGK+ H +K ++ + V ++L+DMYAK +
Sbjct: 153 EFTFATVLTSCIRASGLGLGKQIHGLIVK------WNYDSHIFVGSSLLDMYAKAGQIKE 206
Query: 410 ARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALM 469
AR +F+ + RDV + T +I Y+Q G +AL +F ++ + + PN T + L
Sbjct: 207 AREIFECLP--ERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEG--MSPNYVTYASLLT 262
Query: 470 ACARLAALRFGRQIHAYVLRNQYEMLIPFVA---NCLIDMYSRSGDIDTARVVFDNLKQR 526
A + LA L G+Q H +VLR + +PF A N LIDMYS+ G++ AR +FDN+ +R
Sbjct: 263 ALSGLALLDHGKQAHCHVLRRE----LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPER 318
Query: 527 NVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEG-LAPDGVTFLVLLYACSHSGMVDQGLKY 585
+SW +++ GY HGLG + F MR E + PD VT L +L CSH M D GL
Sbjct: 319 TAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNI 378
Query: 586 FDSM-SKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIH 644
FD M + E+G EHY CIVD+LGRA R+DEA E I+ MP +PT + +LL CR+H
Sbjct: 379 FDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVH 438
Query: 645 ANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSW 704
+V++GE RL+E+E E G+Y +LSN+YA+AGRW DV +R++M V K PG SW
Sbjct: 439 LSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSW 498
Query: 705 VQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLF 764
+Q ++ F DRTHP+ +++ + + ++K GYVP S L+DVD+E+K +L
Sbjct: 499 IQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLL 558
Query: 765 EHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFK 824
HSEKLAL +G++ T G PIR+ KNLRIC DCH+ S + E+ LRD NRFH
Sbjct: 559 GHSEKLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIV 618
Query: 825 EGSCTCKGYW 834
+G C+C YW
Sbjct: 619 DGICSCGDYW 628
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 193/426 (45%), Gaps = 85/426 (19%)
Query: 123 FLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYAR 182
L+M G + + +L AC + + R G VHA + + + ++ L+ Y +
Sbjct: 40 LLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGK 99
Query: 183 CDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDG-- 240
CD L AR++ DEM + ++VSW +++ Y+Q+G + L +FA M ++ DG
Sbjct: 100 CDCLEDARKVLDEMPEK---NVVSWTAMISRYSQTGHSSEALTVFAEM-----MRSDGKP 151
Query: 241 --VSLVNALSACASLGTWSRGKQ--------------------------CGMMEEAKKVF 272
+ L++C GKQ G ++EA+++F
Sbjct: 152 NEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIF 211
Query: 273 ERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGH 332
E + +DVVS A++ GY+++G E+A +F ++ E + N VT++
Sbjct: 212 ECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYA------------- 258
Query: 333 EALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLM 392
SLL+ + + L GK+ HC+ ++R L P +
Sbjct: 259 ----------------------SLLTALSGLALLDHGKQAHCHVLRREL------PFYAV 290
Query: 393 VINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQ 452
+ N+LIDMY+KC ++ AR +FD + R +W M+ YS++G + L LF ++ +
Sbjct: 291 LQNSLIDMYSKCGNLSYARRLFDNMP--ERTAISWNAMLVGYSKHGLGREVLELF-RLMR 347
Query: 453 QDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVAN--CLIDMYSRS 510
+K VKP+A TL L C+ G I ++ +Y P + C++DM R+
Sbjct: 348 DEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGT-KPGTEHYGCIVDMLGRA 406
Query: 511 GDIDTA 516
G ID A
Sbjct: 407 GRIDEA 412
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 31/270 (11%)
Query: 99 SVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVH 158
+V W A+I R + A +F +MMR P+E+TF VL +C G +H
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 159 AVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSG 218
+I +DS++FV ++L+ MYA+ + AR++F+ + + D+VS I+A YAQ G
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPER---DVVSCTAIIAGYAQLG 233
Query: 219 DAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQ----------------- 261
E L +F R+ + + + V+ + L+A + L GKQ
Sbjct: 234 LDEEALEMFHRLHSE-GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 262 ---------CGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQEN-V 311
CG + A+++F+ M + +SWNAM+ GYS+ G + LF+ MR E V
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 312 KLNVVTWSAVIAGYAQRGHGHEALDVFRQM 341
K + VT AV++G + L++F M
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGM 382
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 99/196 (50%), Gaps = 6/196 (3%)
Query: 468 LMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRN 527
L AC ALR G+++HA++++ +Y + ++ L+ Y + ++ AR V D + ++N
Sbjct: 59 LNACLDKRALRDGQRVHAHMIKTRY-LPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKN 117
Query: 528 VVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFD 587
VVSWT++++ Y G +A F +M + P+ TF +L +C + + G K
Sbjct: 118 VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG-KQIH 176
Query: 588 SMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANV 647
+ ++ + + ++D+ +A ++ EA E+ E +P E + A++ G +A +
Sbjct: 177 GLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP-ERDVVSCTAIIAG---YAQL 232
Query: 648 ELGELAANRLLELESE 663
L E A L SE
Sbjct: 233 GLDEEALEMFHRLHSE 248
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 284/837 (33%), Positives = 427/837 (51%), Gaps = 120/837 (14%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTF-PFVLKACG-ELPSSRCGSSVHAV 160
WN++I + +AFR+F M G P EYTF V AC P R +
Sbjct: 174 WNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCT 233
Query: 161 ICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDA 220
I SG +++FV + L++ +A+ +LSYAR++F++M + V+ N ++ +
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR---NAVTLNGLMVGLVRQKWG 290
Query: 221 EGGLMLFARMTGDVKVQGDG-VSLVNAL---SACASLGTWSRGKQ--------------- 261
E LF M + V + V L+++ S +G +G++
Sbjct: 291 EEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGL-KKGREVHGHVITTGLVDFMV 349
Query: 262 ------------CGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQE 309
CG + +A++VF M KD VSWN+M+TG + G F +A +K MR+
Sbjct: 350 GIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRH 409
Query: 310 N-----------------------------------VKLNVVTWSAVIAGYAQRGHGHEA 334
+ + LNV +A++ YA+ G+ +E
Sbjct: 410 DILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNEC 469
Query: 335 LDVFRQM--------------------------------QFCGLEPNVVTLVSLLSGCAS 362
+F M Q G + N +T S+LS +S
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSS 529
Query: 363 VGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNR 422
+ LGK+ H +K ++ D+ NALI Y KC +D +F +A + R
Sbjct: 530 LSFGELGKQIHGLALKNNIA------DEATTENALIACYGKCGEMDGCEKIFSRMAER-R 582
Query: 423 DVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQ 482
D TW MI Y N AL L M Q + + ++F + L A A +A L G +
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQ--RLDSFMYATVLSAFASVATLERGME 640
Query: 483 IHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHG 542
+HA +R E + V + L+DMYS+ G +D A F+ + RN SW S+++GY HG
Sbjct: 641 VHACSVRACLESDV-VVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHG 699
Query: 543 LGDKAHWAFDQMRKEGLAP-DGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEH 601
G++A F+ M+ +G P D VTF+ +L ACSH+G++++G K+F+SMS +G++ R EH
Sbjct: 700 QGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEH 759
Query: 602 YACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHAN---VELGELAANRLL 658
++C+ D+LGRA LD+ + IE MPM+P +IW +L C AN ELG+ AA L
Sbjct: 760 FSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC-CRANGRKAELGKKAAEMLF 818
Query: 659 ELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGD 718
+LE E +Y LL N+YA GRW+D+ + R MK VKK G SWV K+G F GD
Sbjct: 819 QLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGD 878
Query: 719 RTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILT 778
++HP + IY+ L L ++++ GYVPQT FAL+D++ E K ++L HSEKLA+A+ +
Sbjct: 879 KSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAA 938
Query: 779 TAPGT-PIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
T PIRI KNLR+CGDCHSA +IS I +IILRDSNRFHHF++G+C+C +W
Sbjct: 939 QRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 140/557 (25%), Positives = 249/557 (44%), Gaps = 52/557 (9%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRC--GSSVHAV 160
W ++ R A M++ G ++Y F VL+AC E+ S G +H +
Sbjct: 70 WACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGL 129
Query: 161 ICSSGFDSNVFVCNALMAMYARC-DTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGD 219
+ + + V N L++MY +C ++ YA F ++ + + VSWN+I++ Y+Q+GD
Sbjct: 130 MFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDI---EVKNSVSWNSIISVYSQAGD 186
Query: 220 AEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMK--- 276
+F+ M Q DG SL T + C + E ++ E++
Sbjct: 187 QRSAFRIFSSM------QYDGSRPTEY--TFGSLVTTA----CSLTEPDVRLLEQIMCTI 234
Query: 277 -----VKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHG 331
+ D+ + +V+ +++ GS A +F +M N VT + ++ G ++ G
Sbjct: 235 QKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETR----NAVTLNGLMVGLVRQKWG 290
Query: 332 HEALDVFRQMQF---CGLEPNVVTLVSL--LSGCASVGALLLGKETHCYTIKRVLSVDGS 386
EA +F M E V+ L S S VG L G+E H + I L
Sbjct: 291 EEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVG-LKKGREVHGHVITTGLV---- 345
Query: 387 HPDDLMV--INALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDAL 444
D MV N L++MYAKC S+ AR +F + K D +W MI QNG +A+
Sbjct: 346 ---DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK--DSVSWNSMITGLDQNGCFIEAV 400
Query: 445 ALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLI 504
+ M + D L P +FTL +L +CA L + G+QIH L+ ++ + V+N L+
Sbjct: 401 ERYKSMRRHDIL--PGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVS-VSNALM 457
Query: 505 DMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLG-DKAHWAFDQMRKEGLAPDG 563
+Y+ +G ++ R +F ++ + + VSW S++ +A F ++ G +
Sbjct: 458 TLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNR 517
Query: 564 VTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIE 623
+TF +L A S + G K ++ + I+ A ++ G+ +D ++
Sbjct: 518 ITFSSVLSAVSSLSFGELG-KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFS 576
Query: 624 GMPMEPTPIIWVALLNG 640
M + W ++++G
Sbjct: 577 RMAERRDNVTWNSMISG 593
Score = 138 bits (348), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 225/490 (45%), Gaps = 34/490 (6%)
Query: 158 HAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQS 217
H+ + + D +V++CN L+ Y AR++FDEM P + + VSW IV+ Y+++
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM--P-LRNCVSWACIVSGYSRN 80
Query: 218 GDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWS--RGKQC-GMMEEAKKVFER 274
G+ + L+ M + + + + V+ L AC +G+ G+Q G+M F+
Sbjct: 81 GEHKEALVFLRDMVKE-GIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLM------FKL 133
Query: 275 MKVKDVVSWNAMVTGYSR-IGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHE 333
D V N +++ Y + IGS A F + + N V+W+++I+ Y+Q G
Sbjct: 134 SYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVK----NSVSWNSIISVYSQAGDQRS 189
Query: 334 ALDVFRQMQFCGLEPNVVTLVSLLSGCASVGA--LLLGKETHCYTIKRVLSVDGSHPDDL 391
A +F MQ+ G P T SL++ S+ + L ++ C K L DL
Sbjct: 190 AFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLT------DL 243
Query: 392 MVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMF 451
V + L+ +AK S+ AR +F+ + +N V +M+G Q G +A LF M
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQMETRNA-VTLNGLMVGLVRQKWG-EEATKLFMDMN 301
Query: 452 QQDKLVKPNAFTL---SCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYS 508
V P ++ + S + A L+ GR++H +V+ + + N L++MY+
Sbjct: 302 SMID-VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYA 360
Query: 509 RSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLV 568
+ G I AR VF + ++ VSW S++TG +G +A + MR+ + P T +
Sbjct: 361 KCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLIS 420
Query: 569 LLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPME 628
L +C+ G + S + GI ++ L L+E ++ MP E
Sbjct: 421 SLSSCASLKWAKLG-QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-E 478
Query: 629 PTPIIWVALL 638
+ W +++
Sbjct: 479 HDQVSWNSII 488
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 186/426 (43%), Gaps = 41/426 (9%)
Query: 278 KDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDV 337
KDV N ++ Y G A +F +M N V+W+ +++GY++ G EAL
Sbjct: 34 KDVYLCNNLINAYLETGDSVSARKVFDEMPLRNC----VSWACIVSGYSRNGEHKEALVF 89
Query: 338 FRQMQFCGLEPNVVTLVSLLSGCASVGA--LLLGKETHCYTIKRVLSVDGSHPDDLMVIN 395
R M G+ N VS+L C +G+ +L G++ H K +VD +V N
Sbjct: 90 LRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDA------VVSN 143
Query: 396 ALIDMYAKC-KSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQD 454
LI MY KC SV A F I KN +W +I YSQ G A +F M Q
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNS--VSWNSIISVYSQAGDQRSAFRIFSSM--QY 199
Query: 455 KLVKPNAFTLSCALMACARLAA--LRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGD 512
+P +T + L +R QI + ++ + FV + L+ +++SG
Sbjct: 200 DGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGL-LTDLFVGSGLVSAFAKSGS 258
Query: 513 IDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKE-GLAPDGVTFLVLLY 571
+ AR VF+ ++ RN V+ LM G G++A F M ++P+ ++++LL
Sbjct: 259 LSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE--SYVILLS 316
Query: 572 ACSHSGMVDQ-GLKYFDSMSKEFGISARAEHYACI----VDLLGRANRLDEAVELIEGMP 626
+ + ++ GLK + + + I V++ + + +A + M
Sbjct: 317 SFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMT 376
Query: 627 MEPTPIIWVALL-----NGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAG-R 680
+ + W +++ NGC I A + + +L GS+TL+S++ + A +
Sbjct: 377 -DKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP------GSFTLISSLSSCASLK 429
Query: 681 WKDVAR 686
W + +
Sbjct: 430 WAKLGQ 435
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 8/121 (6%)
Query: 459 PNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARV 518
P +F SC A RF H+ + +N+ + + ++ N LI+ Y +GD +AR
Sbjct: 6 PLSFVQSCV----GHRGAARF---FHSRLYKNRLDKDV-YLCNNLINAYLETGDSVSARK 57
Query: 519 VFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGM 578
VFD + RN VSW +++GY +G +A M KEG+ + F+ +L AC G
Sbjct: 58 VFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGS 117
Query: 579 V 579
V
Sbjct: 118 V 118
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 431 bits (1109), Expect = e-119, Method: Compositional matrix adjust.
Identities = 255/699 (36%), Positives = 379/699 (54%), Gaps = 29/699 (4%)
Query: 140 FVLKACGELPSSRCGSSVHAVICSSGFDSNV--FVCNALMAMYARCDTLSYARQLFDEMF 197
+LK S R G VHA I + DS F+ N L+ MY++ D AR +
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARLVL--RL 67
Query: 198 QPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWS 257
P ++VSW ++++ AQ+G L+ F M + V D + A A ASL
Sbjct: 68 TPAR-NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPND-FTFPCAFKAVASLRLPV 125
Query: 258 RGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVT 317
GKQ + + ++ DV + Y + +DA LF ++ + N++ T
Sbjct: 126 TGKQIHAL-----AVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLE----T 176
Query: 318 WSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTI 377
W+A I+ G EA++ F + + PN +T + L+ C+ L LG + H +
Sbjct: 177 WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVL 236
Query: 378 KRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQN 437
+ D S V N LID Y KCK + + ++F + KN +W ++ +Y QN
Sbjct: 237 RSGFDTDVS------VCNGLIDFYGKCKQIRSSEIIFTEMGTKN--AVSWCSLVAAYVQN 288
Query: 438 GGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIP 497
A L+ + + +V+ + F +S L ACA +A L GR IHA+ ++ E I
Sbjct: 289 HEDEKASVLY--LRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTI- 345
Query: 498 FVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQM--R 555
FV + L+DMY + G I+ + FD + ++N+V+ SL+ GY G D A F++M R
Sbjct: 346 FVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPR 405
Query: 556 KEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRL 615
G P+ +TF+ LL ACS +G V+ G+K FDSM +GI AEHY+CIVD+LGRA +
Sbjct: 406 GCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMV 465
Query: 616 DEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIY 675
+ A E I+ MP++PT +W AL N CR+H +LG LAA L +L+ + G++ LLSN +
Sbjct: 466 ERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTF 525
Query: 676 ANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLV 735
A AGRW + +R +K G+KK G SW+ K F DR+H +++I LA L
Sbjct: 526 AAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLR 585
Query: 736 QRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICG 795
++A GY P +L+D+++EEK + HSEKLALA+G+L+ PIRITKNLRICG
Sbjct: 586 NEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICG 645
Query: 796 DCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
DCHS F+S + EII+RD+NRFH FK+G C+CK YW
Sbjct: 646 DCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 135/514 (26%), Positives = 232/514 (45%), Gaps = 42/514 (8%)
Query: 42 LLLRQCKSLTQVYL---IHQQIIVQNLTHVPP----SHLIAAYVSHNAPSPALSLLQRIS 94
LLL+ S + + L +H +I V+ L PP ++LI Y + P A L+ R++
Sbjct: 11 LLLKNAISASSMRLGRVVHARI-VKTLDSPPPPFLANYLINMYSKLDHPESA-RLVLRLT 68
Query: 95 PSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCG 154
P+ +V W +LI + A F +M R G P+++TFP KA L G
Sbjct: 69 PAR-NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTG 127
Query: 155 SSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAY 214
+HA+ G +VFV + MY + AR+LFDE+ + ++ +WN ++
Sbjct: 128 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPER---NLETWNAFISNS 184
Query: 215 AQSG---DAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKV 271
G +A + F R+ G + ++ L+AC+ + G Q + V
Sbjct: 185 VTDGRPREAIEAFIEFRRIDG----HPNSITFCAFLNACSDWLHLNLGMQLHGL-----V 235
Query: 272 FERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHG 331
DV N ++ Y + + +F +M + N V+W +++A Y Q
Sbjct: 236 LRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK----NAVSWCSLVAAYVQNHED 291
Query: 332 HEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDL 391
+A ++ + + +E + + S+LS CA + L LG+ H + +K + +
Sbjct: 292 EKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE------RTI 345
Query: 392 MVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMF 451
V +AL+DMY KC ++ + FD + KN + T +IG Y+ G + ALALF +M
Sbjct: 346 FVGSALVDMYGKCGCIEDSEQAFDEMPEKN--LVTRNSLIGGYAHQGQVDMALALFEEMA 403
Query: 452 QQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVA--NCLIDMYSR 509
+ PN T L AC+R A+ G +I +R+ Y + P +C++DM R
Sbjct: 404 PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS-MRSTYG-IEPGAEHYSCIVDMLGR 461
Query: 510 SGDIDTARVVFDNLKQRNVVS-WTSLMTGYGMHG 542
+G ++ A + + +S W +L MHG
Sbjct: 462 AGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 169/375 (45%), Gaps = 21/375 (5%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVIC 162
WNA I +V P A F++ R HP+ TF L AC + G +H ++
Sbjct: 177 WNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVL 236
Query: 163 SSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEG 222
SGFD++V VCN L+ Y +C + + +F EM G + VSW ++VAAY Q+ + E
Sbjct: 237 RSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEM---GTKNAVSWCSLVAAYVQNHEDEK 293
Query: 223 GLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVS 282
+L+ R D+ V+ + + LSACA + G+ K ER +
Sbjct: 294 ASVLYLRSRKDI-VETSDFMISSVLSACAGMAGLELGRSI-HAHAVKACVERT----IFV 347
Query: 283 WNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQM- 341
+A+V Y + G ED+ F +M ++ N+VT +++I GYA +G AL +F +M
Sbjct: 348 GSALVDMYGKCGCIEDSEQAFDEMPEK----NLVTRNSLIGGYAHQGQVDMALALFEEMA 403
Query: 342 -QFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDM 400
+ CG PN +T VSLLS C+ GA+ E + S G P + ++DM
Sbjct: 404 PRGCGPTPNYMTFVSLLSACSRAGAV----ENGMKIFDSMRSTYGIEPGAEHY-SCIVDM 458
Query: 401 YAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPN 460
+ V+ A + P ++ W + + +G L +F+ D N
Sbjct: 459 LGRAGMVERAYEFIKKM-PIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGN 517
Query: 461 AFTLSCALMACARLA 475
LS A R A
Sbjct: 518 HVLLSNTFAAAGRWA 532
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 218/543 (40%), Positives = 328/543 (60%), Gaps = 26/543 (4%)
Query: 299 AFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGL-EPNVVTLVSLL 357
A +F K+ + +NV W+ +I GYA+ G+ A ++R+M+ GL EP+ T L+
Sbjct: 72 AHKVFSKIEK---PINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLI 128
Query: 358 SGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAI 417
++ + LG+ H I+ S GS + V N+L+ +YA C V A +FD +
Sbjct: 129 KAVTTMADVRLGETIHSVVIR---SGFGSL---IYVQNSLLHLYANCGDVASAYKVFDKM 182
Query: 418 APKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAAL 477
K D+ W +I +++NG +ALAL+ +M K +KP+ FT+ L ACA++ AL
Sbjct: 183 PEK--DLVAWNSVINGFAENGKPEEALALYTEM--NSKGIKPDGFTIVSLLSACAKIGAL 238
Query: 478 RFGRQIHAYVL-----RNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWT 532
G+++H Y++ RN + +N L+D+Y+R G ++ A+ +FD + +N VSWT
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHS------SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWT 292
Query: 533 SLMTGYGMHGLGDKAHWAFDQMRK-EGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSK 591
SL+ G ++G G +A F M EGL P +TF+ +LYACSH GMV +G +YF M +
Sbjct: 293 SLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMRE 352
Query: 592 EFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGE 651
E+ I R EH+ C+VDLL RA ++ +A E I+ MPM+P +IW LL C +H + +L E
Sbjct: 353 EYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 412
Query: 652 LAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGT 711
A ++L+LE G Y LLSN+YA+ RW DV +IR M GVKK PG S V+
Sbjct: 413 FARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRV 472
Query: 712 ATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEEKGDLLFEHSEKLA 771
F +GD++HPQS IY L + R+++ GYVPQ S DV++EEK + + HSEK+A
Sbjct: 473 HEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIA 532
Query: 772 LAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCK 831
+A+ +++T +PI + KNLR+C DCH AI +S + N EI++RD +RFHHFK GSC+C+
Sbjct: 533 IAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQ 592
Query: 832 GYW 834
YW
Sbjct: 593 DYW 595
Score = 172 bits (437), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 117/394 (29%), Positives = 206/394 (52%), Gaps = 29/394 (7%)
Query: 72 HLIAAYVSHNAPSP---ALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMR 128
HLI VS +P P A + +I P +VF WN LIR + +AF L+ +M
Sbjct: 55 HLIFYLVSLPSPPPMSYAHKVFSKIE-KPINVFIWNTLIRGYAEIGNSISAFSLYREMRV 113
Query: 129 RGW-HPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLS 187
G PD +T+PF++KA + R G ++H+V+ SGF S ++V N+L+ +YA C ++
Sbjct: 114 SGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVA 173
Query: 188 YARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNAL 247
A ++FD+M + D+V+WN+++ +A++G E L L+ M ++ DG ++V+ L
Sbjct: 174 SAYKVFDKMPEK---DLVAWNSVINGFAENGKPEEALALYTEMNSK-GIKPDGFTIVSLL 229
Query: 248 SACASLGTWSRGKQCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMR 307
SACA +G + GK+ + + + +++ S N ++ Y+R G E+A LF +M
Sbjct: 230 SACAKIGALTLGKRVHVY-----MIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM- 283
Query: 308 QENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFC-GLEPNVVTLVSLLSGCASVGAL 366
V N V+W+++I G A G G EA+++F+ M+ GL P +T V +L C+ G +
Sbjct: 284 ---VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMV 340
Query: 367 LLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVAT 426
G E +R+ P + ++D+ A+ V A ++ P +V
Sbjct: 341 KEGFE----YFRRMREEYKIEP-RIEHFGCMVDLLARAGQVKKAYEYIKSM-PMQPNVVI 394
Query: 427 WTVMIGSYSQNGGANDALALFPQMFQQDKLVKPN 460
W ++G+ + +G ++ A Q+ Q ++PN
Sbjct: 395 WRTLLGACTVHGDSDLAEFARIQILQ----LEPN 424
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 249/705 (35%), Positives = 385/705 (54%), Gaps = 38/705 (5%)
Query: 141 VLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPG 200
+L+ C S G VH + SG N+ N L+ MY +C A ++FD M +
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER- 70
Query: 201 ICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGK 260
++VSW+ +++ + +GD +G L LF+ M G + + + L AC L +G
Sbjct: 71 --NVVSWSALMSGHVLNGDLKGSLSLFSEM-GRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 261 Q----CGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVV 316
Q C K FE M V N++V YS+ G +A +F+++ V +++
Sbjct: 128 QIHGFC-----LKIGFEMM----VEVGNSLVDMYSKCGRINEAEKVFRRI----VDRSLI 174
Query: 317 TWSAVIAGYAQRGHGHEALDVFRQMQFCGLE--PNVVTLVSLLSGCASVGALLLGKETHC 374
+W+A+IAG+ G+G +ALD F MQ ++ P+ TL SLL C+S G + GK+ H
Sbjct: 175 SWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHG 234
Query: 375 YTIKRVLSVDGSH-PDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGS 433
+ ++ G H P + +L+D+Y KC + AR FD I K + + +W+ +I
Sbjct: 235 FLVR-----SGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI--KEKTMISWSSLILG 287
Query: 434 YSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYE 493
Y+Q G +A+ LF ++ Q+ + ++F LS + A A LR G+Q+ A ++
Sbjct: 288 YAQEGEFVEAMGLFKRL--QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLP-S 344
Query: 494 MLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQ 553
L V N ++DMY + G +D A F ++ ++V+SWT ++TGYG HGLG K+ F +
Sbjct: 345 GLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYE 404
Query: 554 MRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRAN 613
M + + PD V +L +L ACSHSGM+ +G + F + + GI R EHYAC+VDLLGRA
Sbjct: 405 MLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAG 464
Query: 614 RLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSN 673
RL EA LI+ MP++P IW LL+ CR+H ++ELG+ LL ++++ +Y ++SN
Sbjct: 465 RLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSN 524
Query: 674 IYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAG 733
+Y AG W + R L G+KK G SWV+ + F G+ +HP + I E L
Sbjct: 525 LYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKE 584
Query: 734 LVQRIK-AMGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILT---TAPGTPIRITK 789
+R++ +GYV LHD+DDE K + L HSEKLA+ + T G IR+ K
Sbjct: 585 AERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFK 644
Query: 790 NLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
NLR+C DCH I +S I ++RD+ RFH F++G C+C YW
Sbjct: 645 NLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 234/510 (45%), Gaps = 84/510 (16%)
Query: 65 LTHVPPSHLIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFL 124
L + ++LI Y P A + + +V W+AL+ V + LF
Sbjct: 39 LNLITSNYLIDMYCKCREPLMAYKVFDSMPER--NVVSWSALMSGHVLNGDLKGSLSLFS 96
Query: 125 QMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCD 184
+M R+G +P+E+TF LKACG L + G +H GF+ V V N+L+ MY++C
Sbjct: 97 EMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCG 156
Query: 185 TLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARM-TGDVKVQGDGVSL 243
++ A ++F + ++SWN ++A + +G L F M ++K + D +L
Sbjct: 157 RINEAEKVFRRIVDR---SLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTL 213
Query: 244 VNALSACASLGTWSRGKQ----------------------------CGMMEEAKKVFERM 275
+ L AC+S G GKQ CG + A+K F+++
Sbjct: 214 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI 273
Query: 276 KVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEAL 335
K K ++SW++++ GY++ G F +A LFK++++ N +++ S++I +A
Sbjct: 274 KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFAD-------F 326
Query: 336 DVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVIN 395
+ RQ GK+ +K ++ S V+N
Sbjct: 327 ALLRQ----------------------------GKQMQALAVKLPSGLETS------VLN 352
Query: 396 ALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDK 455
+++DMY KC VD A F + K DV +WTV+I Y ++G ++ +F +M + +
Sbjct: 353 SVVDMYLKCGLVDEAEKCFAEMQLK--DVISWTVVITGYGKHGLGKKSVRIFYEMLRHN- 409
Query: 456 LVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVAN--CLIDMYSRSGDI 513
++P+ L AC+ ++ G ++ + +L + P V + C++D+ R+G +
Sbjct: 410 -IEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETH--GIKPRVEHYACVVDLLGRAGRL 466
Query: 514 DTARVVFDNLKQR-NVVSWTSLMTGYGMHG 542
A+ + D + + NV W +L++ +HG
Sbjct: 467 KEAKHLIDTMPIKPNVGIWQTLLSLCRVHG 496
Score = 149 bits (376), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 113/340 (33%), Positives = 170/340 (50%), Gaps = 20/340 (5%)
Query: 352 TLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVAR 411
LVS+L C G G + HCY +K GS +L+ N LIDMY KC+ +A
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLK-----SGSGL-NLITSNYLIDMYCKCREPLMAY 61
Query: 412 VMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMAC 471
+FD++ +N V +W+ ++ + NG +L+LF +M +Q + PN FT S L AC
Sbjct: 62 KVFDSMPERN--VVSWSALMSGHVLNGDLKGSLSLFSEMGRQG--IYPNEFTFSTNLKAC 117
Query: 472 ARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSW 531
L AL G QIH + L+ +EM++ V N L+DMYS+ G I+ A VF + R+++SW
Sbjct: 118 GLLNALEKGLQIHGFCLKIGFEMMVE-VGNSLVDMYSKCGRINEAEKVFRRIVDRSLISW 176
Query: 532 TSLMTGYGMHGLGDKAHWAFDQMRKEGLA--PDGVTFLVLLYACSHSGMVDQGLKYFDSM 589
+++ G+ G G KA F M++ + PD T LL ACS +GM+ G + +
Sbjct: 177 NAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFL 236
Query: 590 SKE-FGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVE 648
+ F + A +VDL + L A + + + E T I W +L+ G
Sbjct: 237 VRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIK-EKTMISWSSLILGYAQEGEFV 295
Query: 649 LGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIR 688
RL EL S+ D S+ L S I G + D A +R
Sbjct: 296 EAMGLFKRLQELNSQID-SFALSSII----GVFADFALLR 330
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 427 bits (1099), Expect = e-118, Method: Compositional matrix adjust.
Identities = 243/693 (35%), Positives = 392/693 (56%), Gaps = 34/693 (4%)
Query: 151 SRCGSSVHA-VICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNT 209
S+CG +A S + NVF N ++ YA+ + ARQLFDE+ QP D VS+NT
Sbjct: 54 SKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQP---DTVSYNT 110
Query: 210 IVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAK 269
+++ YA + + ++LF RM + + DG +L ++AC + C +
Sbjct: 111 LISGYADARETFAAMVLFKRMR-KLGFEVDGFTLSGLIAACCDRVDLIKQLHCFSVSGGF 169
Query: 270 KVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRG 329
+ + NA VT YS+ G +A ++F M + + V+W+++I Y Q
Sbjct: 170 DSYSSVN-------NAFVTYYSKGGLLREAVSVFYGMDELR---DEVSWNSMIVAYGQHK 219
Query: 330 HGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPD 389
G +AL ++++M F G + ++ TL S+L+ S+ L+ G++ H IK G H +
Sbjct: 220 EGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKA-----GFHQN 274
Query: 390 DLMVINALIDMYAKCKSVD----VARVMFDAIAPKNRDVATWTVMIGSYSQNGG-ANDAL 444
V + LID Y+KC D +V + ++P D+ W MI YS N + +A+
Sbjct: 275 S-HVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP---DLVVWNTMISGYSMNEELSEEAV 330
Query: 445 ALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLI 504
F QM Q +P+ + C AC+ L++ +QIH +++ V N LI
Sbjct: 331 KSFRQM--QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALI 388
Query: 505 DMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGV 564
+Y +SG++ AR VFD + + N VS+ ++ GY HG G +A + +M G+AP+ +
Sbjct: 389 SLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKI 448
Query: 565 TFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEG 624
TF+ +L AC+H G VD+G +YF++M + F I AEHY+C++DLLGRA +L+EA I+
Sbjct: 449 TFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDA 508
Query: 625 MPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDV 684
MP +P + W ALL CR H N+ L E AAN L+ ++ Y +L+N+YA+A +W+++
Sbjct: 509 MPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEEM 568
Query: 685 ARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYV 744
A +R M+ ++K+PGCSW++ K+ F D +HP +++ E L +++++K +GYV
Sbjct: 569 ASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKMKKVGYV 628
Query: 745 PQTSFALHDVDDEEKGDL---LFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAI 801
+A+ D+ +GD L HSEKLA+A+G+++T G + + KNLRICGDCH+AI
Sbjct: 629 MDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNLRICGDCHNAI 688
Query: 802 TFISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
F+S + EII+RD+ RFH FK+G C+C YW
Sbjct: 689 KFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 130 bits (328), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 169/335 (50%), Gaps = 22/335 (6%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVIC 162
WN++I + + A L+ +M+ +G+ D +T VL A L G H +
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 163 SSGFDSNVFVCNALMAMYAR---CDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGD 219
+GF N V + L+ Y++ CD + + ++F E+ P D+V WNT+++ Y+ + +
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSP---DLVVWNTMISGYSMNEE 324
Query: 220 AEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQC-GMMEEAKKVFERMKVK 278
+ R + + D S V SAC++L + S+ KQ G+ ++ R+ V
Sbjct: 325 LSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVN 384
Query: 279 DVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVF 338
NA+++ Y + G+ +DA +F +M + LN V+++ +I GYAQ GHG EAL ++
Sbjct: 385 -----NALISLYYKSGNLQDARWVFDRMPE----LNAVSFNCMIKGYAQHGHGTEALLLY 435
Query: 339 RQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALI 398
++M G+ PN +T V++LS CA G + G+E + T+K ++ + +I
Sbjct: 436 QRMLDSGIAPNKITFVAVLSACAHCGKVDEGQE-YFNTMKETFKIEPEAEH----YSCMI 490
Query: 399 DMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGS 433
D+ + ++ A DA+ K VA W ++G+
Sbjct: 491 DLLGRAGKLEEAERFIDAMPYKPGSVA-WAALLGA 524
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 121/269 (44%), Gaps = 24/269 (8%)
Query: 96 SPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGS 155
SP V W + ++ L + A + F QM R G PD+ +F V AC L S
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 156 SVHAVICSSGFDSN-VFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAY 214
+H + S SN + V NAL+++Y + L AR +FD M P + + VS+N ++ Y
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRM--PEL-NAVSFNCMIKGY 422
Query: 215 AQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFER 274
AQ G L+L+ RM D + + ++ V LSACA CG ++E ++ F
Sbjct: 423 AQHGHGTEALLLYQRML-DSGIAPNKITFVAVLSACA---------HCGKVDEGQEYFNT 472
Query: 275 MKVK-----DVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRG 329
MK + ++ M+ R G E+A M K V W+A++ A R
Sbjct: 473 MKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAM---PYKPGSVAWAALLG--ACRK 527
Query: 330 HGHEALDVFRQMQFCGLEPNVVTLVSLLS 358
H + AL + ++P T +L+
Sbjct: 528 HKNMALAERAANELMVMQPLAATPYVMLA 556
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 419 bits (1076), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/614 (38%), Positives = 358/614 (58%), Gaps = 30/614 (4%)
Query: 99 SVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWH--PDEYTFPFVLKACGELPSSRCGSS 156
S+ +N +IR VR L +A +F++M+ G PD YT+PFV KA GEL S + G
Sbjct: 79 SLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLV 138
Query: 157 VHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQ 216
VH I S F + +V NAL+AMY + AR +FD M D++SWNT+++ Y +
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNR---DVISWNTMISGYYR 195
Query: 217 SGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMK 276
+G LM+F M + V D ++V+ L C L G+ + E K++ ++++
Sbjct: 196 NGYMNDALMMFDWMVNE-SVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE 254
Query: 277 VKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALD 336
VK NA+V Y + G ++A +F +M + +V +TW+ +I GY + G AL+
Sbjct: 255 VK-----NALVNMYLKCGRMDEARFVFDRMERRDV----ITWTCMINGYTEDGDVENALE 305
Query: 337 VFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINA 396
+ R MQF G+ PN VT+ SL+S C + GK H + +++ + D+++ +
Sbjct: 306 LCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVY------SDIIIETS 359
Query: 397 LIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKL 456
LI MYAKCK VD+ +F + + W+ +I QN +DAL LF +M ++D
Sbjct: 360 LISMYAKCKRVDLCFRVFSGASKYH--TGPWSAIIAGCVQNELVSDALGLFKRMRRED-- 415
Query: 457 VKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTA 516
V+PN TL+ L A A LA LR IH Y+ + + M A L+ +YS+ G +++A
Sbjct: 416 VEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGF-MSSLDAATGLVHVYSKCGTLESA 474
Query: 517 RVVFDNL----KQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYA 572
+F+ + K ++VV W +L++GYGMHG G A F +M + G+ P+ +TF L A
Sbjct: 475 HKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNA 534
Query: 573 CSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPI 632
CSHSG+V++GL F M + + AR+ HY CIVDLLGRA RLDEA LI +P EPT
Sbjct: 535 CSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTST 594
Query: 633 IWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMK 692
+W ALL C H NV+LGE+AAN+L ELE E G+Y LL+NIYA GRWKD+ ++RS+M+
Sbjct: 595 VWGALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMME 654
Query: 693 HTGVKKRPGCSWVQ 706
+ G++K+PG S ++
Sbjct: 655 NVGLRKKPGHSTIE 668
Score = 133 bits (335), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 167/386 (43%), Gaps = 58/386 (15%)
Query: 262 CGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAV 321
CG + A+K+FE M ++S+N ++ Y R G + DA ++F +M E VK
Sbjct: 62 CGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVK--------- 112
Query: 322 IAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVL 381
P+ T + + ++ LG H ++
Sbjct: 113 ------------------------CVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWF 148
Query: 382 SVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGAN 441
D V NAL+ MY V++AR +FD + KNRDV +W MI Y +NG N
Sbjct: 149 G------RDKYVQNALLAMYMNFGKVEMARDVFDVM--KNRDVISWNTMISGYYRNGYMN 200
Query: 442 DALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVAN 501
DAL +F M + V + T+ L C L L GR +H V + I V N
Sbjct: 201 DALMMFDWMVNES--VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIE-VKN 257
Query: 502 CLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAP 561
L++MY + G +D AR VFD +++R+V++WT ++ GY G + A M+ EG+ P
Sbjct: 258 ALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRP 317
Query: 562 DGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACI------VDLLGRANRL 615
+ VT L+ C + V+ G G + R + Y+ I + + + R+
Sbjct: 318 NAVTIASLVSVCGDALKVNDG-------KCLHGWAVRQQVYSDIIIETSLISMYAKCKRV 370
Query: 616 DEAVELIEGMPMEPTPIIWVALLNGC 641
D + G T W A++ GC
Sbjct: 371 DLCFRVFSGASKYHTG-PWSAIIAGC 395
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 417 bits (1073), Expect = e-115, Method: Compositional matrix adjust.
Identities = 214/556 (38%), Positives = 329/556 (59%), Gaps = 15/556 (2%)
Query: 279 DVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVF 338
DV + ++++ YS G DA LF ++ +V VTW+A+ +GY G EA+D+F
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV----VTWTALFSGYTTSGRHREAIDLF 200
Query: 339 RQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALI 398
++M G++P+ +V +LS C VG L G+ + +K + ++ + V L+
Sbjct: 201 KKMVEMGVKPDSYFIVQVLSACVHVGDLDSGE----WIVKYMEEME--MQKNSFVRTTLV 254
Query: 399 DMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVK 458
++YAKC ++ AR +FD++ K D+ TW+ MI Y+ N + + LF QM Q++ +K
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEK--DIVTWSTMIQGYASNSFPKEGIELFLQMLQEN--LK 310
Query: 459 PNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARV 518
P+ F++ L +CA L AL G + + R+++ + F+AN LIDMY++ G +
Sbjct: 311 PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEF-LTNLFMANALIDMYAKCGAMARGFE 369
Query: 519 VFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGM 578
VF +K++++V + ++G +G + F Q K G++PDG TFL LL C H+G+
Sbjct: 370 VFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGL 429
Query: 579 VDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALL 638
+ GL++F+++S + + EHY C+VDL GRA LD+A LI MPM P I+W ALL
Sbjct: 430 IQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALL 489
Query: 639 NGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKK 698
+GCR+ + +L E L+ LE G+Y LSNIY+ GRW + A +R +M G+KK
Sbjct: 490 SGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKK 549
Query: 699 RPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEE 758
PG SW++ + F D++HP S KIY L L ++ MG+VP T F DV++EE
Sbjct: 550 IPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEE 609
Query: 759 KGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSN 818
K +L HSEKLA+A G+++T G IR+ KNLR+CGDCH + IS I EI++RD+N
Sbjct: 610 KERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNN 669
Query: 819 RFHHFKEGSCTCKGYW 834
RFH F GSC+C YW
Sbjct: 670 RFHCFTNGSCSCNDYW 685
Score = 169 bits (429), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 214/474 (45%), Gaps = 92/474 (19%)
Query: 99 SVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVH 158
++F +N+LI V L LFL + + G + +TFP VLKAC S + G +H
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 159 AVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSG 218
+++ GF+ +V +L+++Y+ L+ A +LFDE+ +V+W + + Y SG
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRS---VVTWTALFSGYTTSG 191
Query: 219 DAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGK------------------ 260
+ LF +M ++ V+ D +V LSAC +G G+
Sbjct: 192 RHREAIDLFKKMV-EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR 250
Query: 261 --------QCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVK 312
+CG ME+A+ VF+ M KD+V+W+ M+ GY+ ++ LF +M QEN+K
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLK 310
Query: 313 LNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKET 372
P+ ++V LS CAS+GAL LG+
Sbjct: 311 -----------------------------------PDQFSIVGFLSSCASLGALDLGEWG 335
Query: 373 HCYTIKRVLSVDGSHP--DDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVM 430
+S+ H +L + NALIDMYAKC ++ +F + K +D+
Sbjct: 336 --------ISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM--KEKDIVIMNAA 385
Query: 431 IGSYSQNGGANDALALFPQMFQQDKL-VKPNAFTLSCALMACARLA----ALRFGRQIH- 484
I ++NG + A+F Q +KL + P+ T L C LRF I
Sbjct: 386 ISGLAKNGHVKLSFAVFG---QTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISC 442
Query: 485 AYVLRNQYEMLIPFVANCLIDMYSRSGDIDTA-RVVFDNLKQRNVVSWTSLMTG 537
Y L+ E C++D++ R+G +D A R++ D + N + W +L++G
Sbjct: 443 VYALKRTVEHY-----GCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Query: 481 RQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGM 540
+QIH ++ N + F+ N L+ + ++F + + N+ + SL+ G+
Sbjct: 30 KQIHVSLI-NHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVN 88
Query: 541 HGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAE 600
+ L + F +RK GL G TF ++L AC+ + G+ S+ + G +
Sbjct: 89 NHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGID-LHSLVVKCGFNHDVA 147
Query: 601 HYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNG 640
++ + + RL++A +L + +P + + + W AL +G
Sbjct: 148 AMTSLLSIYSGSGRLNDAHKLFDEIP-DRSVVTWTALFSG 186
>sp|Q9FFN1|PP363_ARATH Pentatricopeptide repeat-containing protein At5g03800
OS=Arabidopsis thaliana GN=EMB175 PE=2 SV=1
Length = 896
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 261/801 (32%), Positives = 412/801 (51%), Gaps = 63/801 (7%)
Query: 73 LIAAYVSHNAPSPALSLLQRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGW- 131
LI+ Y+ P A+ L +S S +V + ALI RL L A ++F +M + G
Sbjct: 120 LISTYLKLGFPREAI--LVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLV 177
Query: 132 HPDEYTFPFVLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYAR-----CDTL 186
P+EYTF +L AC + G +H +I SGF ++VFV N+LM++Y + CD +
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 187 SYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGV---SL 243
+LFDE+ Q D+ SWNT+V++ + G + LF M +V+G GV +L
Sbjct: 238 ---LKLFDEIPQR---DVASWNTVVSSLVKEGKSHKAFDLFYEMN---RVEGFGVDSFTL 288
Query: 244 VNALSACASLGTWSRGKQ-------CGMMEE----------------AKKV---FERMKV 277
LS+C RG++ G+M+E KKV +E M
Sbjct: 289 STLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMA 348
Query: 278 KDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDV 337
+D V++ M+T Y G + A +F + ++N +T++A++AG+ + GHG +AL +
Sbjct: 349 QDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNT----ITYNALMAGFCRNGHGLKALKL 404
Query: 338 FRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINAL 397
F M G+E +L S + C V + ++ H + IK + + + AL
Sbjct: 405 FTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPC------IQTAL 458
Query: 398 IDMYAKCKSVDVARVMFDAIAPKNRDVATWTV-MIGSYSQNGGANDALALFPQMFQQDKL 456
+DM +C+ + A MFD P N D + T +IG Y++NG + A++LF + + KL
Sbjct: 459 LDMCTRCERMADAEEMFDQ-WPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKL 517
Query: 457 VKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTA 516
+ +L+ L C L G QIH Y L+ Y I + N LI MY++ D D A
Sbjct: 518 F-LDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDIS-LGNSLISMYAKCCDSDDA 575
Query: 517 RVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYAC--S 574
+F+ +++ +V+SW SL++ Y + GD+A + +M ++ + PD +T +++ A +
Sbjct: 576 IKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYT 635
Query: 575 HSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIW 634
S + F SM + I EHY V +LG L+EA + I MP++P +
Sbjct: 636 ESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVL 695
Query: 635 VALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHT 694
ALL+ CRIH+N + + A +L + E Y L SNIY+ +G W IR M+
Sbjct: 696 RALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRER 755
Query: 695 GVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDV 754
G +K P SW+ + +F D +HPQ + IY L L+ +GY P T + L +V
Sbjct: 756 GYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPNTEYVLQEV 815
Query: 755 DDEEKGDLLFEHSEKLALAYGILTT-APGTPIRITKNLRICGDCHSAITFISMIINHEII 813
D+ K LF HS KLA+ YGIL++ G P+R+ KN+ +CGDCH +IS+++ EI+
Sbjct: 816 DEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVMLCGDCHEFFKYISVVVKREIV 875
Query: 814 LRDSNRFHHFKEGSCTCKGYW 834
LRDS+ FHHF G C+C+ W
Sbjct: 876 LRDSSGFHHFVNGKCSCRDLW 896
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 481 RQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGM 540
+ +HA L+ + E + N LI Y + G A +VF +L VVS+T+L++G+
Sbjct: 100 KAVHASFLKLREEK--TRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSR 157
Query: 541 HGLGDKAHWAFDQMRKEGLA-PDGVTFLVLLYACSHSGMVDQGLK 584
L +A F +MRK GL P+ TF+ +L AC G++
Sbjct: 158 LNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQ 202
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 416 bits (1070), Expect = e-115, Method: Compositional matrix adjust.
Identities = 227/601 (37%), Positives = 350/601 (58%), Gaps = 34/601 (5%)
Query: 239 DGVSLVNALSACASLGTWSRGKQ--CGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSF 296
D S L +CASL G+Q C + + + + A+++ Y + G
Sbjct: 52 DAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCET-------EPFVLTALISMYCKCGLV 104
Query: 297 EDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSL 356
DA +F++ Q + +L+V ++A+I+GY +A +FR+M+ G+ + VT++ L
Sbjct: 105 ADARKVFEENPQSS-QLSV-CYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGL 162
Query: 357 LSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDA 416
+ C L LG+ H +K G ++ V+N+ I MY KC SV+ R +FD
Sbjct: 163 VPLCTVPEYLWLGRSLHGQCVK------GGLDSEVAVLNSFITMYMKCGSVEAGRRLFDE 216
Query: 417 IAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAA 476
+ K + TW +I YSQNG A D L L+ QM + V P+ FTL L +CA L A
Sbjct: 217 MPVKG--LITWNAVISGYSQNGLAYDVLELYEQM--KSSGVCPDPFTLVSVLSSCAHLGA 272
Query: 477 LRFGRQIHAYVLRNQYEMLIP--FVANCLIDMYSRSGDIDTARVVFDNLKQRNVVSWTSL 534
+ G ++ V N + +P FV+N I MY+R G++ AR VFD + +++VSWT++
Sbjct: 273 KKIGHEVGKLVESNGF---VPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAM 329
Query: 535 MTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGMVDQGLKYFDSMSKEFG 594
+ YGMHG+G+ FD M K G+ PDG F+++L ACSHSG+ D+GL+ F +M +E+
Sbjct: 330 IGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYK 389
Query: 595 ISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALLNGCRIHANVELGELAA 654
+ EHY+C+VDLLGRA RLDEA+E IE MP+EP +W ALL C+IH NV++ ELA
Sbjct: 390 LEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF 449
Query: 655 NRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKKRPGCSWVQGKEGTATF 714
+++E E G Y L+SNIY+++ + + RIR +M+ +K+PG S+V+ K F
Sbjct: 450 AKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLF 509
Query: 715 FVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVD-DEEKGDLLFEHSEKLALA 773
GDR+H Q+++++ +L L + + D D EE EHSE+LA+A
Sbjct: 510 LAGDRSHEQTEEVHRMLDELETSVMELA-------GNMDCDRGEEVSSTTREHSERLAIA 562
Query: 774 YGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSNRFHHFKEGSCTCKGY 833
+GIL + PGT I + KNLR+C DCH + +S I++ + ++RD++RFH+FK+G C+CK Y
Sbjct: 563 FGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGVCSCKDY 622
Query: 834 W 834
W
Sbjct: 623 W 623
Score = 176 bits (447), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 225/495 (45%), Gaps = 76/495 (15%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVIC 162
WN +R L + L+ M+R G PD ++FPF+LK+C L G +H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 163 SSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEG 222
G ++ FV AL++MY +C ++ AR++F+E Q V +N +++ Y +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLS-VCYNALISGYTANSKVTD 139
Query: 223 GLMLFARMTGDVKVQGDGVSLVNALSACAS-----LGTWSRGK----------------- 260
+F RM + V D V+++ + C LG G+
Sbjct: 140 AAYMFRRMK-ETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFI 198
Query: 261 ----QCGMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVV 316
+CG +E +++F+ M VK +++WNA+++GYS+ G D L+++M+
Sbjct: 199 TMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSS------- 251
Query: 317 TWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYT 376
G+ P+ TLVS+LS CA +GA +G E
Sbjct: 252 ----------------------------GVCPDPFTLVSVLSSCAHLGAKKIGHE----- 278
Query: 377 IKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQ 436
+ +++ +G P ++ V NA I MYA+C ++ AR +FD + K+ + +WT MIG Y
Sbjct: 279 VGKLVESNGFVP-NVFVSNASISMYARCGNLAKARAVFDIMPVKS--LVSWTAMIGCYGM 335
Query: 437 NGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLI 496
+G L LF M ++ ++P+ L AC+ G ++ + R
Sbjct: 336 HGMGEIGLMLFDDMIKRG--IRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPG 393
Query: 497 PFVANCLIDMYSRSGDIDTARVVFDNLK-QRNVVSWTSLMTGYGMHGLGDKAHWAFDQMR 555
P +CL+D+ R+G +D A +++ + + W +L+ +H D A AF ++
Sbjct: 394 PEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVI 453
Query: 556 KEGLAPDGVTFLVLL 570
+ P+ + + VL+
Sbjct: 454 E--FEPNNIGYYVLM 466
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 411 bits (1056), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/556 (37%), Positives = 335/556 (60%), Gaps = 15/556 (2%)
Query: 279 DVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVF 338
DV N ++ YS+ G E A +F M ++ ++V+W+ +I Y + EALD+F
Sbjct: 95 DVTLLNVLINAYSKCGFVELARQVFDGM----LERSLVSWNTMIGLYTRNRMESEALDIF 150
Query: 339 RQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDLMVINALI 398
+M+ G + + T+ S+LS C L K+ HC ++K + ++ L V AL+
Sbjct: 151 LEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLN------LYVGTALL 204
Query: 399 DMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMFQQDKLVK 458
D+YAKC + A +F+++ +++ TW+ M+ Y QN +AL L+ + Q ++
Sbjct: 205 DLYAKCGMIKDAVQVFESM--QDKSSVTWSSMVAGYVQNKNYEEALLLYRR--AQRMSLE 260
Query: 459 PNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRSGDIDTARV 518
N FTLS + AC+ LAAL G+Q+HA + ++ + + FVA+ +DMY++ G + + +
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNV-FVASSAVDMYAKCGSLRESYI 319
Query: 519 VFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLLYACSHSGM 578
+F ++++N+ W ++++G+ H + F++M+++G+ P+ VTF LL C H+G+
Sbjct: 320 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 379
Query: 579 VDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEPTPIIWVALL 638
V++G ++F M +G+S HY+C+VD+LGRA L EA ELI+ +P +PT IW +LL
Sbjct: 380 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
Query: 639 NGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRSLMKHTGVKK 698
CR++ N+EL E+AA +L ELE E G++ LLSNIYA +W+++A+ R L++ VKK
Sbjct: 440 ASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKK 499
Query: 699 RPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSFALHDVDDEE 758
G SW+ K+ TF VG+ HP+ ++I L LV + + GY P LHDV+ +
Sbjct: 500 VRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGK 559
Query: 759 KGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMIINHEIILRDSN 818
K +LL +HSEKLAL +G++ +P+RI KNLRIC DCH + SM II+RD N
Sbjct: 560 KEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVN 619
Query: 819 RFHHFKEGSCTCKGYW 834
RFHHF +G C+C +W
Sbjct: 620 RFHHFSDGHCSCGDFW 635
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 210/438 (47%), Gaps = 40/438 (9%)
Query: 141 VLKACGELPSSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPG 200
+L+ C + + H I + +V + N L+ Y++C + ARQ+FD M +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 201 ICDIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGK 260
+VSWNT++ Y ++ L +F M + + ++ + LSAC G
Sbjct: 127 ---LVSWNTMIGLYTRNRMESEALDIFLEMRNE-GFKFSEFTISSVLSAC--------GV 174
Query: 261 QCGMMEEAKKVFERMKVKDVVSWN-----AMVTGYSRIGSFEDAFALFKKMRQENVKLNV 315
C +E K + VK + N A++ Y++ G +DA +F+ M+ + +
Sbjct: 175 NCDALECKK--LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDK----SS 228
Query: 316 VTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCY 375
VTWS+++AGY Q + EAL ++R+ Q LE N TL S++ C+++ AL+ GK+ H
Sbjct: 229 VTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAV 288
Query: 376 TIKRVLSVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYS 435
K ++ V ++ +DMYAKC S+ + ++F + KN ++ W +I ++
Sbjct: 289 ICK------SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL--WNTIISGFA 340
Query: 436 QNGGANDALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEML 495
++ + + LF +M QQD + PN T S L C + GR+ ++R Y L
Sbjct: 341 KHARPKEVMILFEKM-QQDGM-HPNEVTFSSLLSVCGHTGLVEEGRRFFK-LMRTTYG-L 396
Query: 496 IPFVAN--CLIDMYSRSGDIDTARVVFDNLKQRNVVS-WTSLMTGYGMHGLGDKAHWAFD 552
P V + C++D+ R+G + A + ++ S W SL+ ++ + A A +
Sbjct: 397 SPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAE 456
Query: 553 QMRKEGLAPDGVTFLVLL 570
++ + L P+ VLL
Sbjct: 457 KLFE--LEPENAGNHVLL 472
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 142/272 (52%), Gaps = 13/272 (4%)
Query: 99 SVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVH 158
S+ WN +I R R+ A +FL+M G+ E+T VL ACG + +H
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 159 AVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSG 218
+ + D N++V AL+ +YA+C + A Q+F+ M V+W+++VA Y Q+
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKS---SVTWSSMVAGYVQNK 242
Query: 219 DAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVK 278
+ E L+L+ R + ++ + +L + + AC++L GKQ + + +
Sbjct: 243 NYEEALLLYRR-AQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAV-----ICKSGFGS 296
Query: 279 DVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVF 338
+V ++ V Y++ GS +++ +F +++++N++L W+ +I+G+A+ E + +F
Sbjct: 297 NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLEL----WNTIISGFAKHARPKEVMILF 352
Query: 339 RQMQFCGLEPNVVTLVSLLSGCASVGALLLGK 370
+MQ G+ PN VT SLLS C G + G+
Sbjct: 353 EKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGR 384
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 108/209 (51%), Gaps = 18/209 (8%)
Query: 103 WNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCGSSVHAVIC 162
W++++ V+ + + A L+ + R +++T V+ AC L + G +HAVIC
Sbjct: 231 WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC 290
Query: 163 SSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSGDAEG 222
SGF SNVFV ++ + MYA+C +L + +F E+ + ++ WNTI++ +A+ +
Sbjct: 291 KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK---NLELWNTIISGFAKHARPKE 347
Query: 223 GLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVK---- 278
++LF +M D + + V+ + LS C G++EE ++ F+ M+
Sbjct: 348 VMILFEKMQQD-GMHPNEVTFSSLLSVCG---------HTGLVEEGRRFFKLMRTTYGLS 397
Query: 279 -DVVSWNAMVTGYSRIGSFEDAFALFKKM 306
+VV ++ MV R G +A+ L K +
Sbjct: 398 PNVVHYSCMVDILGRAGLLSEAYELIKSI 426
>sp|Q9SN85|PP267_ARATH Pentatricopeptide repeat-containing protein At3g47530
OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1
Length = 591
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 218/506 (43%), Positives = 312/506 (61%), Gaps = 13/506 (2%)
Query: 333 EALDVFRQMQF-CGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSHPDDL 391
E +FR ++ L N ++ L C G LL G + H ++ S DG D L
Sbjct: 95 EGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIH----GKIFS-DGFLSDSL 149
Query: 392 MVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDALALFPQMF 451
+ + L+D+Y+ C++ A +FD I PK RD +W V+ Y +N D L LF +M
Sbjct: 150 L-MTTLMDLYSTCENSTDACKVFDEI-PK-RDTVSWNVLFSCYLRNKRTRDVLVLFDKMK 206
Query: 452 QQ-DKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCLIDMYSRS 510
D VKP+ T AL ACA L AL FG+Q+H ++ N + ++N L+ MYSR
Sbjct: 207 NDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALN-LSNTLVSMYSRC 265
Query: 511 GDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRKEGLAPDGVTFLVLL 570
G +D A VF +++RNVVSWT+L++G M+G G +A AF++M K G++P+ T LL
Sbjct: 266 GSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLL 325
Query: 571 YACSHSGMVDQGLKYFDSM-SKEFGISARAEHYACIVDLLGRANRLDEAVELIEGMPMEP 629
ACSHSG+V +G+ +FD M S EF I HY C+VDLLGRA LD+A LI+ M M+P
Sbjct: 326 SACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKP 385
Query: 630 TPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWKDVARIRS 689
IW LL CR+H +VELGE + L+EL++E+ G Y LL N Y+ G+W+ V +RS
Sbjct: 386 DSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRS 445
Query: 690 LMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMGYVPQTSF 749
LMK + +PGCS ++ + F V D +HP+ ++IY++LA + Q++K GYV + +
Sbjct: 446 LMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITS 505
Query: 750 ALHDVD-DEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAITFISMII 808
LH+++ +EEKG L HSEKLA+A+GIL T PGT IR+TKNLR C DCH+ F+S +
Sbjct: 506 ELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVY 565
Query: 809 NHEIILRDSNRFHHFKEGSCTCKGYW 834
+ +I+RD +RFHHFK GSC+C +W
Sbjct: 566 DRIVIVRDRSRFHHFKGGSCSCNDFW 591
Score = 142 bits (358), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 171/351 (48%), Gaps = 23/351 (6%)
Query: 91 QRISPSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHP-DEYTFPFVLKACGELP 149
QR++P+ + N +IR + P FRLF + R P + + F LK C +
Sbjct: 71 QRLNPT---LSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSG 127
Query: 150 SSRCGSSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNT 209
G +H I S GF S+ + LM +Y+ C+ + A ++FDE+ + D VSWN
Sbjct: 128 DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKR---DTVSWNV 184
Query: 210 IVAAYAQSGDAEGGLMLFARMTGDVK--VQGDGVSLVNALSACASLGTWSRGKQCGMMEE 267
+ + Y ++ L+LF +M DV V+ DGV+ + AL ACA+LG GKQ +
Sbjct: 185 LFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFID 244
Query: 268 AKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQ 327
+ + + N +V+ YSR GS + A+ +F MR+ NV V+W+A+I+G A
Sbjct: 245 ENGLSGALNLS-----NTLVSMYSRCGSMDKAYQVFYGMRERNV----VSWTALISGLAM 295
Query: 328 RGHGHEALDVFRQMQFCGLEPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVDGSH 387
G G EA++ F +M G+ P TL LLS C+ G + G R+ S +
Sbjct: 296 NGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGM----MFFDRMRSGEFKI 351
Query: 388 PDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNG 438
+L ++D+ + + +D A + ++ K D W ++G+ +G
Sbjct: 352 KPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKP-DSTIWRTLLGACRVHG 401
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 210/572 (36%), Positives = 335/572 (58%), Gaps = 38/572 (6%)
Query: 289 GYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIAGYAQRGHGHEALDVFRQMQFCGLEP 348
Y+ G + ALF + + ++ ++A I + G +A ++ Q+ + P
Sbjct: 73 AYASHGKIRHSLALF----HQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINP 128
Query: 349 NVVTLVSLLSGCASVGALLLGKETHCYTIKRVLSVD------------------------ 384
N T SLL C++ GK H + +K L +D
Sbjct: 129 NEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVF 184
Query: 385 GSHPD-DLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGANDA 443
P+ L+ A+I YAK +V+ AR +FD++ RD+ +W VMI Y+Q+G NDA
Sbjct: 185 DRMPERSLVSSTAMITCYAKQGNVEAARALFDSMC--ERDIVSWNVMIDGYAQHGFPNDA 242
Query: 444 LALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVANCL 503
L LF ++ + K KP+ T+ AL AC+++ AL GR IH +V ++ + + V L
Sbjct: 243 LMLFQKLLAEGK-PKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVK-VCTGL 300
Query: 504 IDMYSRSGDIDTARVVFDNLKQRNVVSWTSLMTGYGMHGLGDKAHWAFDQMRK-EGLAPD 562
IDMYS+ G ++ A +VF++ ++++V+W +++ GY MHG A F++M+ GL P
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 563 GVTFLVLLYACSHSGMVDQGLKYFDSMSKEFGISARAEHYACIVDLLGRANRLDEAVELI 622
+TF+ L AC+H+G+V++G++ F+SM +E+GI + EHY C+V LLGRA +L A E I
Sbjct: 361 DITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI 420
Query: 623 EGMPMEPTPIIWVALLNGCRIHANVELGELAANRLLELESEKDGSYTLLSNIYANAGRWK 682
+ M M+ ++W ++L C++H + LG+ A L+ L + G Y LLSNIYA+ G ++
Sbjct: 421 KNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYE 480
Query: 683 DVARIRSLMKHTGVKKRPGCSWVQGKEGTATFFVGDRTHPQSQKIYEILAGLVQRIKAMG 742
VA++R+LMK G+ K PG S ++ + F GDR H +S++IY +L + +RIK+ G
Sbjct: 481 GVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHG 540
Query: 743 YVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTTAPGTPIRITKNLRICGDCHSAIT 802
YVP T+ L D+++ EK L HSE+LA+AYG+++T PG+P++I KNLR+C DCH+
Sbjct: 541 YVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTK 600
Query: 803 FISMIINHEIILRDSNRFHHFKEGSCTCKGYW 834
IS I +I++RD NRFHHF +GSC+C +W
Sbjct: 601 LISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 143 bits (361), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 179/394 (45%), Gaps = 69/394 (17%)
Query: 41 SLLLRQCKSLTQVYLIHQQIIVQNLTHVPPSHLIA-----AYVSHNAPSPALSLL-QRIS 94
++L+ + +S+ +V IH I+ NL P ++ AY SH +L+L Q I
Sbjct: 33 AVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTID 92
Query: 95 PSPFSVFWWNALIRRAVRLRLPDNAFRLFLQMMRRGWHPDEYTFPFVLKACGELPSSRCG 154
P +F + A I A L D AF L++Q++ +P+E+TF +LK+C S++ G
Sbjct: 93 PD---LFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSG 145
Query: 155 SSVHAVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGIC------------ 202
+H + G + +V L+ +YA+ + A+++FD M + +
Sbjct: 146 KLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQ 205
Query: 203 ----------------DIVSWNTIVAAYAQSGDAEGGLMLFARMTGDVKVQGDGVSLVNA 246
DIVSWN ++ YAQ G LMLF ++ + K + D +++V A
Sbjct: 206 GNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAA 265
Query: 247 LSACASLGTWSRGK--------------------------QCGMMEEAKKVFERMKVKDV 280
LSAC+ +G G+ +CG +EEA VF KD+
Sbjct: 266 LSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDI 325
Query: 281 VSWNAMVTGYSRIGSFEDAFALFKKMRQ-ENVKLNVVTWSAVIAGYAQRGHGHEALDVFR 339
V+WNAM+ GY+ G +DA LF +M+ ++ +T+ + A G +E + +F
Sbjct: 326 VAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFE 385
Query: 340 QM-QFCGLEPNVVTLVSLLSGCASVGALLLGKET 372
M Q G++P + L+S G L ET
Sbjct: 386 SMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYET 419
Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 153/284 (53%), Gaps = 19/284 (6%)
Query: 263 GMMEEAKKVFERMKVKDVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVI 322
G + A+KVF+RM + +VS AM+T Y++ G+ E A ALF M + ++V+W+ +I
Sbjct: 175 GDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER----DIVSWNVMI 230
Query: 323 AGYAQRGHGHEALDVFRQMQFCGL-EPNVVTLVSLLSGCASVGALLLGKETHCYTIKRVL 381
GYAQ G ++AL +F+++ G +P+ +T+V+ LS C+ +GAL G+ H + +
Sbjct: 231 DGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRI 290
Query: 382 SVDGSHPDDLMVINALIDMYAKCKSVDVARVMFDAIAPKNRDVATWTVMIGSYSQNGGAN 441
+ ++ V LIDMY+KC S++ A ++F+ P+ +D+ W MI Y+ +G +
Sbjct: 291 RL------NVKVCTGLIDMYSKCGSLEEAVLVFND-TPR-KDIVAWNAMIAGYAMHGYSQ 342
Query: 442 DALALFPQMFQQDKLVKPNAFTLSCALMACARLAALRFGRQIHAYVLRNQYEMLIPFVAN 501
DAL LF +M Q ++P T L ACA + G I + Q + P + +
Sbjct: 343 DALRLFNEM-QGITGLQPTDITFIGTLQACAHAGLVNEG--IRIFESMGQEYGIKPKIEH 399
Query: 502 --CLIDMYSRSGDIDTARVVFDNLK-QRNVVSWTSLMTGYGMHG 542
CL+ + R+G + A N+ + V W+S++ +HG
Sbjct: 400 YGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 110/230 (47%), Gaps = 21/230 (9%)
Query: 100 VFWWNALIRRAVRLRLPDNAFRLFLQMMRRGW-HPDEYTFPFVLKACGELPSSRCGSSVH 158
+ WN +I + P++A LF +++ G PDE T L AC ++ + G +H
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
Query: 159 AVICSSGFDSNVFVCNALMAMYARCDTLSYARQLFDEMFQPGICDIVSWNTIVAAYAQSG 218
+ SS NV VC L+ MY++C +L A +F++ + DIV+WN ++A YA G
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRK---DIVAWNAMIAGYAMHG 339
Query: 219 DAEGGLMLFARMTGDVKVQGDGVSLVNALSACASLGTWSRGKQCGMMEEAKKVFERMKVK 278
++ L LF M G +Q ++ + L ACA G++ E ++FE M +
Sbjct: 340 YSQDALRLFNEMQGITGLQPTDITFIGTLQACA---------HAGLVNEGIRIFESMGQE 390
Query: 279 -----DVVSWNAMVTGYSRIGSFEDAFALFKKMRQENVKLNVVTWSAVIA 323
+ + +V+ R G + A+ K M N+ + V WS+V+
Sbjct: 391 YGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNM---NMDADSVLWSSVLG 437
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.136 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 299,656,562
Number of Sequences: 539616
Number of extensions: 12258392
Number of successful extensions: 46902
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 35752
Number of HSP's gapped (non-prelim): 2440
length of query: 834
length of database: 191,569,459
effective HSP length: 126
effective length of query: 708
effective length of database: 123,577,843
effective search space: 87493112844
effective search space used: 87493112844
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 66 (30.0 bits)