Your job contains 1 sequence.
>003275
MENEVVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM
HAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINS
LLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDID
TMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHALD
ALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDAD
KNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVIWPGEI
TATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPH
NYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPV
QKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSF
STMFFSHRENTVSSLGRVVLIVWLFVVLIINSSYTASLTSILTVQQLTSQIEGIDSLISS
TEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIE
LFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYN
ECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQFRRFGSEDEESIET
EDIAHDTSTSGRRTLRSTSFKDLIDFIDRKEAEIKEILKRRNSDNKRPSQSSDG
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003275
(834 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2207165 - symbol:GLR3.4 "AT1G05200" species:37... 2957 3.3e-308 1
TAIR|locus:2206095 - symbol:GLR3.3 "glutamate receptor 3.... 2296 3.7e-238 1
TAIR|locus:2122128 - symbol:GLUR2 "glutamate receptor 2" ... 2254 1.0e-233 1
TAIR|locus:2081805 - symbol:GLR3.6 "glutamate receptor 3.... 2199 7.0e-228 1
TAIR|locus:2062586 - symbol:GLR5 "glutamate receptor 5" s... 1810 1.2e-186 1
TAIR|locus:2047256 - symbol:GLR2.2 "glutamate receptor 2.... 1238 4.8e-126 1
TAIR|locus:2066086 - symbol:GLR2.8 "glutamate receptor 2.... 1166 2.0e-118 1
TAIR|locus:2181196 - symbol:GLR2.1 "glutamate receptor 2.... 1147 2.1e-116 1
TAIR|locus:2047251 - symbol:GLR2.3 "glutamate receptor 2.... 1143 5.6e-116 1
TAIR|locus:2066107 - symbol:GLR2.7 "glutamate receptor 2.... 1019 7.7e-103 1
TAIR|locus:2066148 - symbol:GLR2.9 "glutamate receptor 2.... 974 4.5e-98 1
TAIR|locus:2079681 - symbol:GLR1.4 "glutamate receptor 1.... 643 2.1e-86 2
TAIR|locus:2166001 - symbol:ATGLR1.2 species:3702 "Arabid... 601 1.6e-76 2
TAIR|locus:2166006 - symbol:GLR1.3 "glutamate receptor 1.... 583 6.2e-74 2
TAIR|locus:2102975 - symbol:GLR1.1 "glutamate receptor 1.... 370 4.1e-50 3
UNIPROTKB|O43424 - symbol:GRID2 "Glutamate receptor ionot... 192 1.6e-33 3
UNIPROTKB|F1PEI5 - symbol:GRID2 "Uncharacterized protein"... 189 3.8e-33 3
UNIPROTKB|F1NAD5 - symbol:GRID2 "Uncharacterized protein"... 187 4.7e-33 3
UNIPROTKB|E9PH24 - symbol:GRID2 "Glutamate receptor ionot... 192 3.0e-32 3
MGI|MGI:95813 - symbol:Grid2 "glutamate receptor, ionotro... 189 1.2e-31 3
RGD|68368 - symbol:Grid2 "glutamate receptor, ionotropic,... 189 1.5e-31 3
UNIPROTKB|Q63226 - symbol:Grid2 "Glutamate receptor ionot... 189 1.5e-31 3
ZFIN|ZDB-GENE-020125-7 - symbol:gria4a "glutamate recepto... 200 2.2e-31 3
UNIPROTKB|F1P0S5 - symbol:GRIA3 "Uncharacterized protein"... 195 2.5e-30 4
UNIPROTKB|G3V6Z5 - symbol:Gria3 "Glutamate receptor, iono... 195 2.3e-29 4
ZFIN|ZDB-GENE-030616-53 - symbol:gria3b "glutamate recept... 187 4.1e-29 4
MGI|MGI:95810 - symbol:Gria3 "glutamate receptor, ionotro... 195 4.6e-29 4
UNIPROTKB|A2AVK2 - symbol:GRIN1 "Glutamate receptor ionot... 238 6.0e-29 4
UNIPROTKB|Q05586 - symbol:GRIN1 "Glutamate receptor ionot... 238 7.2e-29 4
RGD|2736 - symbol:Grin1 "glutamate receptor, ionotropic, ... 238 7.2e-29 4
UNIPROTKB|P35439 - symbol:Grin1 "Glutamate receptor ionot... 238 7.2e-29 4
UNIPROTKB|F1RU73 - symbol:LOC100519996 "Uncharacterized p... 195 7.5e-29 4
UNIPROTKB|E2RHU1 - symbol:GRIA3 "Uncharacterized protein"... 195 7.7e-29 4
MGI|MGI:95819 - symbol:Grin1 "glutamate receptor, ionotro... 238 9.1e-29 4
FB|FBgn0010399 - symbol:Nmdar1 "NMDA receptor 1" species:... 237 1.3e-28 3
UNIPROTKB|B3P2E5 - symbol:Nmdar1 "Glutamate [NMDA] recept... 237 1.3e-28 3
UNIPROTKB|B4I414 - symbol:Nmdar1 "Glutamate [NMDA] recept... 237 1.3e-28 3
UNIPROTKB|B4PVB0 - symbol:Nmdar1 "Glutamate [NMDA] recept... 237 1.3e-28 3
UNIPROTKB|B4QWW7 - symbol:Nmdar1 "Glutamate [NMDA] recept... 237 1.3e-28 3
RGD|70958 - symbol:Gria3 "glutamate receptor, ionotropic,... 186 1.4e-28 4
UNIPROTKB|P19492 - symbol:Gria3 "Glutamate receptor 3" sp... 186 1.4e-28 4
ZFIN|ZDB-GENE-030131-8013 - symbol:gria4b "glutamate rece... 179 1.5e-28 3
UNIPROTKB|F1P2J9 - symbol:GRIN1 "Uncharacterized protein"... 241 2.3e-28 3
UNIPROTKB|G3V8Y9 - symbol:Gria3 "Glutamate receptor 3" sp... 185 2.9e-28 4
UNIPROTKB|E1BGZ0 - symbol:GRIA3 "Uncharacterized protein"... 185 4.8e-28 4
ZFIN|ZDB-GENE-040913-1 - symbol:grid2 "glutamate receptor... 189 1.1e-27 3
UNIPROTKB|P42263 - symbol:GRIA3 "Glutamate receptor 3" sp... 185 2.5e-27 4
UNIPROTKB|B4MU83 - symbol:Nmdar1 "Glutamate [NMDA] recept... 240 5.1e-27 3
UNIPROTKB|Q38PU6 - symbol:GRIA3 "Glutamate receptor 3" sp... 184 1.0e-26 4
UNIPROTKB|Q5VSF9 - symbol:GRIN1 "Glutamate receptor ionot... 238 6.5e-26 5
UNIPROTKB|Q5R1P0 - symbol:GRIN1 "Glutamate receptor ionot... 238 9.6e-26 5
UNIPROTKB|E2R3A6 - symbol:E2R3A6 "Uncharacterized protein... 238 1.1e-25 5
ZFIN|ZDB-GENE-020125-5 - symbol:gria3a "glutamate recepto... 193 1.4e-25 4
UNIPROTKB|F1LPK4 - symbol:Gria2 "Glutamate receptor 2" sp... 185 1.6e-25 4
UNIPROTKB|F1P2K1 - symbol:GRIN1 "Uncharacterized protein"... 241 2.4e-25 4
UNIPROTKB|F1NKY9 - symbol:GRIN1 "Uncharacterized protein"... 241 3.8e-25 4
FB|FBgn0004619 - symbol:GluRIA "Glutamate receptor IA" sp... 208 5.1e-25 4
UNIPROTKB|F1P2J8 - symbol:GRIN1 "Uncharacterized protein"... 241 5.2e-25 4
UNIPROTKB|B4JHV0 - symbol:Nmdar1 "Glutamate [NMDA] recept... 236 1.0e-24 3
UNIPROTKB|E7EMV5 - symbol:GRIA1 "Glutamate receptor 1" sp... 173 1.6e-24 4
UNIPROTKB|F5H470 - symbol:GRIA3 "Glutamate receptor 3" sp... 160 1.8e-24 3
UNIPROTKB|F1RYR0 - symbol:GRIK5 "Uncharacterized protein"... 160 2.2e-24 3
UNIPROTKB|B4LZB5 - symbol:Nmdar1 "Glutamate [NMDA] recept... 230 2.9e-24 3
ZFIN|ZDB-GENE-051202-2 - symbol:grin1b "glutamate recepto... 237 5.8e-24 4
ZFIN|ZDB-GENE-051202-1 - symbol:grin1a "glutamate recepto... 239 5.8e-24 5
UNIPROTKB|G3N3K3 - symbol:GRIN1 "Uncharacterized protein"... 217 1.5e-23 5
UNIPROTKB|H0Y2V8 - symbol:GRIN2C "Glutamate receptor, ion... 183 1.7e-23 4
ZFIN|ZDB-GENE-020125-2 - symbol:gria1b "glutamate recepto... 177 3.4e-23 4
UNIPROTKB|L7MTP7 - symbol:GRIN1 "Glutamate receptor ionot... 238 3.9e-23 4
UNIPROTKB|F6Y5R7 - symbol:GRIN1 "Glutamate receptor ionot... 238 4.0e-23 4
FB|FBgn0264000 - symbol:GluRIB "Glutamate receptor IB" sp... 181 4.5e-23 4
UNIPROTKB|F1PY46 - symbol:GRIN1 "Glutamate receptor ionot... 238 5.4e-23 4
UNIPROTKB|B3LZ39 - symbol:Nmdar1 "Glutamate [NMDA] recept... 237 7.1e-23 2
UNIPROTKB|B4GF83 - symbol:Nmdar1 "Glutamate [NMDA] recept... 236 9.4e-23 2
UNIPROTKB|Q296F7 - symbol:Nmdar1 "Glutamate [NMDA] recept... 236 9.4e-23 2
UNIPROTKB|Q14957 - symbol:GRIN2C "Glutamate receptor iono... 183 9.8e-23 4
UNIPROTKB|B4KD90 - symbol:Nmdar1 "Glutamate [NMDA] recept... 236 1.1e-22 2
ZFIN|ZDB-GENE-020125-1 - symbol:gria1a "glutamate recepto... 181 1.2e-22 4
ZFIN|ZDB-GENE-061207-27 - symbol:grin2bb "glutamate recep... 203 1.5e-22 3
UNIPROTKB|F1NMB0 - symbol:GRIN2B "Uncharacterized protein... 195 1.7e-22 3
UNIPROTKB|F1SQ84 - symbol:GRIN2B "Uncharacterized protein... 204 2.4e-22 3
UNIPROTKB|Q13224 - symbol:GRIN2B "Glutamate receptor iono... 203 2.7e-22 3
UNIPROTKB|Q5R1P3 - symbol:GRIN2B "Glutamate receptor iono... 204 3.4e-22 3
MGI|MGI:95821 - symbol:Grin2b "glutamate receptor, ionotr... 203 4.3e-22 3
RGD|2738 - symbol:Grin2b "glutamate receptor, ionotropic,... 203 4.3e-22 3
UNIPROTKB|Q00960 - symbol:Grin2b "Glutamate receptor iono... 203 4.3e-22 3
UNIPROTKB|F1MCL3 - symbol:GRIN2B "Uncharacterized protein... 203 4.5e-22 3
WB|WBGene00001613 - symbol:glr-2 species:6239 "Caenorhabd... 180 6.9e-22 4
UNIPROTKB|J9NWC8 - symbol:GRIN1 "Glutamate receptor ionot... 238 1.1e-21 4
UNIPROTKB|F1P0E1 - symbol:GRIA4 "Uncharacterized protein"... 202 4.3e-21 2
UNIPROTKB|J9P2L9 - symbol:GRIN2B "Glutamate receptor iono... 194 4.3e-21 3
UNIPROTKB|J9P242 - symbol:GRIK5 "Uncharacterized protein"... 155 5.7e-21 3
ZFIN|ZDB-GENE-070822-3 - symbol:grin2ca "glutamate recept... 192 8.6e-21 3
UNIPROTKB|Q38PU0 - symbol:GRIK5 "KA2" species:9541 "Macac... 155 1.0e-20 3
UNIPROTKB|F1LNE4 - symbol:Gria2 "Glutamate receptor 2" sp... 185 1.2e-20 3
UNIPROTKB|F1MK58 - symbol:GRIA2 "Uncharacterized protein"... 185 1.4e-20 3
MGI|MGI:95809 - symbol:Gria2 "glutamate receptor, ionotro... 185 1.4e-20 3
UNIPROTKB|F1MBY1 - symbol:GRIA2 "Uncharacterized protein"... 185 1.4e-20 3
UNIPROTKB|A8MT92 - symbol:GRIA2 "Glutamate receptor 2" sp... 185 1.4e-20 3
UNIPROTKB|Q38PU7 - symbol:GRIA2 "Glutamate receptor 2" sp... 185 1.7e-20 3
WARNING: Descriptions of 444 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2207165 [details] [associations]
symbol:GLR3.4 "AT1G05200" species:3702 "Arabidopsis
thaliana" [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005576 "extracellular region"
evidence=ISM] [GO:0006874 "cellular calcium ion homeostasis"
evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009611 "response to wounding" evidence=IEP] [GO:0019722
"calcium-mediated signaling" evidence=IDA] [GO:0070417 "cellular
response to cold" evidence=IEP] [GO:0071215 "cellular response to
abscisic acid stimulus" evidence=IEP] [GO:0071260 "cellular
response to mechanical stimulus" evidence=IEP] [GO:0071311
"cellular response to acetate" evidence=IEP] [GO:0005262 "calcium
channel activity" evidence=IMP] [GO:0006816 "calcium ion transport"
evidence=IDA;IMP] [GO:0008066 "glutamate receptor activity"
evidence=IMP] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009536 "plastid"
evidence=IDA] [GO:0015276 "ligand-gated ion channel activity"
evidence=IDA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497 PRINTS:PR01176
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009507 GO:GO:0009611
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
GO:GO:0015276 GO:GO:0071260 GO:GO:0070417 InterPro:IPR001828
GO:GO:0071230 EMBL:AC000098 GO:GO:0004965 eggNOG:NOG316680
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 TCDB:1.A.10.1.10
EMBL:AY072070 EMBL:AK118206 EMBL:AF167355 IPI:IPI00517695
IPI:IPI00538965 PIR:D86186 PIR:T51135 RefSeq:NP_001030971.1
RefSeq:NP_172012.2 UniGene:At.10412 UniGene:At.66937
ProteinModelPortal:Q8GXJ4 PRIDE:Q8GXJ4 EnsemblPlants:AT1G05200.1
EnsemblPlants:AT1G05200.2 GeneID:839268 KEGG:ath:AT1G05200
GeneFarm:2532 TAIR:At1g05200 InParanoid:Q8GXJ4 OMA:WHLDEND
PhylomeDB:Q8GXJ4 ProtClustDB:CLSN2690705 Genevestigator:Q8GXJ4
GermOnline:AT1G05200 GO:GO:0071311 Uniprot:Q8GXJ4
Length = 959
Score = 2957 (1046.0 bits), Expect = 3.3e-308, P = 3.3e-308
Identities = 556/836 (66%), Positives = 676/836 (80%)
Query: 1 MENEVVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM 60
MEN+VVAAIGPQSSGIAH+IS+V NEL+VPLLSFGATDPTL+SLQ+PYFLRTTQ+DY+QM
Sbjct: 122 MENKVVAAIGPQSSGIAHMISYVANELHVPLLSFGATDPTLSSLQFPYFLRTTQNDYFQM 181
Query: 61 HAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINS 120
HA+AD + Y GWR+VIAIFVDD+ GRNGISVLGD L+KKR++ISYKA +PGA S+I
Sbjct: 182 HAIADFLSYSGWRQVIAIFVDDECGRNGISVLGDVLAKKRSRISYKAAITPGADSSSIRD 241
Query: 121 LLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDID 180
LLV NLMESRVFVVHVNPD+GL +FSVAKSLGM A YVWIATDWLP+ +DS E VD D
Sbjct: 242 LLVSVNLMESRVFVVHVNPDSGLNVFSVAKSLGMMASGYVWIATDWLPTAMDSMEHVDSD 301
Query: 181 TMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHALD 240
TM+LLQGVVA RH+T ++ +K+ F++RWKNL+ + GFNSYA+YAYDSVWLVA ALD
Sbjct: 302 TMDLLQGVVAFRHYTIESSVKRQFMARWKNLRPND----GFNSYAMYAYDSVWLVARALD 357
Query: 241 ALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDAD 300
E TFSNDP LH TNGS + LS+L VF+ G++F++ +L MN TG++G I+FD+D
Sbjct: 358 VFFRENNNITFSNDPNLHKTNGSTIQLSALSVFNEGEKFMKIILGMNHTGVTGPIQFDSD 417
Query: 301 KNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSS-NRHLYSVIWPGE 359
+N VNPAY+VLN+ GT R +GYWSN+SGLSVV PE LY++PPN+S+ N+ L +I+PGE
Sbjct: 418 RNRVNPAYEVLNLEGTAPRTVGYWSNHSGLSVVHPETLYSRPPNTSTANQRLKGIIYPGE 477
Query: 360 ITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVP 419
+T PRGWVFPNNG PLRI VPNRVSY ++V+KDK+PPGV+GYCIDVFEAA+ LLPYPVP
Sbjct: 478 VTKPPRGWVFPNNGKPLRIGVPNRVSYTDYVSKDKNPPGVRGYCIDVFEAAIELLPYPVP 537
Query: 420 HNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAP 479
YI+YG+GKRNP Y+++V +V + FD AVGDITIVTNRT+ VDFTQP++ESGLVVVAP
Sbjct: 538 RTYILYGDGKRNPSYDNLVNEVVADNFDVAVGDITIVTNRTRYVDFTQPFIESGLVVVAP 597
Query: 480 VQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFS 539
V++ KSSPW+FLKPFTI MW VTGGFFLFVGA+VWILEHRFN EFRGPP +QL+TIFWFS
Sbjct: 598 VKEAKSSPWSFLKPFTIEMWAVTGGFFLFVGAMVWILEHRFNQEFRGPPRRQLITIFWFS 657
Query: 540 FSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLIS 599
FSTMFFSHRENTVSSLGR NSSYTASLTSILT++QLTS+IEGIDSL++
Sbjct: 658 FSTMFFSHRENTVSSLGRFVLIIWLFVVLIINSSYTASLTSILTIRQLTSRIEGIDSLVT 717
Query: 600 STEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYI 659
S EPIGVQDG+FA NYL++EL I SR+V LK+ E+Y AL RGP GGVAAIVDELPYI
Sbjct: 718 SNEPIGVQDGTFARNYLINELNILPSRIVPLKDEEQYLSALQRGPNAGGVAAIVDELPYI 777
Query: 660 ELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTY 719
E+ ++ +NC+FRTVGQEFT++GWGFAFQRDSPLA+D+STAILQLSE G+L+KIH KWL Y
Sbjct: 778 EVLLTNSNCKFRTVGQEFTRTGWGFAFQRDSPLAVDMSTAILQLSEEGELEKIHRKWLNY 837
Query: 720 -NECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQFRRFGXXXXXXX 778
+ECSM +S ++ S+LSLKSFWGLFLICGI CF+AL FF RV Q++R
Sbjct: 838 KHECSMQISNSED--SQLSLKSFWGLFLICGITCFMALTVFFWRVFWQYQRLLPESADEE 895
Query: 779 XXXXXAHDXXXXXXXXXXXXXFKDLIDFIDRKEAEIKEILKRRNSDNKRPSQSSDG 834
+ FK+LI +D++EAEIKEILK+++S + +QS+ G
Sbjct: 896 RAGEVSEPSRSGRGSRAPS--FKELIKVVDKREAEIKEILKQKSSKKLKSTQSAAG 949
>TAIR|locus:2206095 [details] [associations]
symbol:GLR3.3 "glutamate receptor 3.3" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005262 "calcium channel activity"
evidence=IMP] [GO:0006816 "calcium ion transport" evidence=IMP]
[GO:0008066 "glutamate receptor activity" evidence=IMP] [GO:0071230
"cellular response to amino acid stimulus" evidence=IMP]
[GO:0009630 "gravitropism" evidence=IMP] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497
PRINTS:PR01176 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005262
GO:GO:0019722 GO:GO:0035235 GO:GO:0030288 GO:GO:0009630
InterPro:IPR001828 GO:GO:0071230 GO:GO:0004965 eggNOG:NOG316680
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AC025815
IPI:IPI00548873 PIR:C96495 RefSeq:NP_174978.1 UniGene:At.39090
ProteinModelPortal:Q9C8E7 TCDB:1.A.10.1.10 PaxDb:Q9C8E7
PRIDE:Q9C8E7 EnsemblPlants:AT1G42540.1 GeneID:840859
KEGG:ath:AT1G42540 TAIR:At1g42540 InParanoid:Q9C8E7 OMA:FTCERRV
PhylomeDB:Q9C8E7 ProtClustDB:CLSN2914596 ArrayExpress:Q9C8E7
Genevestigator:Q9C8E7 Uniprot:Q9C8E7
Length = 933
Score = 2296 (813.3 bits), Expect = 3.7e-238, P = 3.7e-238
Identities = 439/771 (56%), Positives = 552/771 (71%)
Query: 1 MENEVVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM 60
ME ++V IGPQ S +AH+ISH+ NEL VPLLSF TDP ++ LQ+PYF+RTTQSD YQM
Sbjct: 90 MEKDIVGIIGPQCSVVAHMISHMANELRVPLLSFAVTDPVMSPLQFPYFIRTTQSDLYQM 149
Query: 61 HAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSP--GASRSAI 118
A+A +V++YGW+EVIA+FVDDD+GRNG++ L D L+ +R +I+YKA P +++ I
Sbjct: 150 DAIASIVDFYGWKEVIAVFVDDDFGRNGVAALNDKLASRRLRITYKAGLHPDTAVNKNEI 209
Query: 119 NSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVD 178
++L+ L++ R+ V+HV + G +F AK LGM YVWIATDWL + LDS+ P+
Sbjct: 210 MNMLIKIMLLQPRIVVIHVYSELGFAVFKEAKYLGMMGNGYVWIATDWLSTNLDSSSPLP 269
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHA 238
+ + +QGV+ LR HTPD+D K+ F RW+ + + N+Y LYAYDSV L+A
Sbjct: 270 AERLETIQGVLVLRPHTPDSDFKREFFKRWRKMS---GASLALNTYGLYAYDSVMLLARG 326
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGS-MLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRF 297
LD +GG +FSN L+ S LNL ++ VFDGG+ L+ +L GL+G+++F
Sbjct: 327 LDKFFKDGGNISFSNHSMLNTLGKSGNLNLEAMTVFDGGEALLKDILGTRMVGLTGQLQF 386
Query: 298 DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKP-PNSSSNRHLYSVIW 356
D++ PAYD++N+ GTG R+IGYWSN+SGLS V PE+LYTK PN S++ L VIW
Sbjct: 387 TPDRSRTRPAYDIINVAGTGVRQIGYWSNHSGLSTVLPELLYTKEKPNMSTSPKLKHVIW 446
Query: 357 PGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGV-KGYCIDVFEAAVNLLP 415
PGE PRGWVF NNG L+I VP RVSY EFV++ + + KG+CIDVF AAVNLLP
Sbjct: 447 PGETFTKPRGWVFSNNGKELKIGVPLRVSYKEFVSQIRGTENMFKGFCIDVFTAAVNLLP 506
Query: 416 YPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLV 475
Y VP +I YGNGK NP Y +V+ + FD VGD+ IVTNRTK+VDFTQPY SGLV
Sbjct: 507 YAVPVKFIPYGNGKENPSYTHMVEMITTGNFDGVVGDVAIVTNRTKIVDFTQPYAASGLV 566
Query: 476 VVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTI 535
VVAP +KL S WAFL+PF MW VTG FLFVG VVWILEHR N+EFRGPP +Q VTI
Sbjct: 567 VVAPFKKLNSGAWAFLRPFNRLMWAVTGCCFLFVGIVVWILEHRTNDEFRGPPKRQCVTI 626
Query: 536 FWFSFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFSFSTMFF+HRENTVS+LGR NSSYTASLTSILTVQQL+S I+GI+
Sbjct: 627 LWFSFSTMFFAHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIE 686
Query: 596 SLISSTEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDE 655
SL +PIG Q GSFA +YL +EL I+ESRLV L E Y+ AL GP GGVAAIVDE
Sbjct: 687 SLRERDDPIGYQVGSFAESYLRNELNISESRLVPLGTPEAYAKALKDGPSKGGVAAIVDE 746
Query: 656 LPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNK 715
PY+ELF+S +NC +R VGQEFTKSGWGFAF RDSPLAIDLSTAIL+L+ENGDLQ+IH+K
Sbjct: 747 RPYVELFLS-SNCAYRIVGQEFTKSGWGFAFPRDSPLAIDLSTAILELAENGDLQRIHDK 805
Query: 716 WLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQ 766
WL N C+++ + + RL LKSFWGLFLICG+AC LAL +F ++ Q
Sbjct: 806 WLMKNACTLENAELES--DRLHLKSFWGLFLICGVACLLALFLYFVQIIRQ 854
>TAIR|locus:2122128 [details] [associations]
symbol:GLUR2 "glutamate receptor 2" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=IMP] [GO:0006883 "cellular sodium ion
homeostasis" evidence=IMP] [GO:0030007 "cellular potassium ion
homeostasis" evidence=IMP] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060
Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:AL022604
EMBL:AL161587 GO:GO:0071230 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000239558 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 EMBL:AF159498 EMBL:AF159499 EMBL:AY059778
IPI:IPI00535851 PIR:T06128 RefSeq:NP_567981.1 RefSeq:NP_974686.1
UniGene:At.2283 ProteinModelPortal:Q93YT1 PRIDE:Q93YT1
EnsemblPlants:AT4G35290.1 EnsemblPlants:AT4G35290.2 GeneID:829682
KEGG:ath:AT4G35290 TAIR:At4g35290 InParanoid:Q93YT1 OMA:MIDELNI
PhylomeDB:Q93YT1 ProtClustDB:CLSN2689771 Genevestigator:Q93YT1
GermOnline:AT4G35290 Uniprot:Q93YT1
Length = 912
Score = 2254 (798.5 bits), Expect = 1.0e-233, P = 1.0e-233
Identities = 447/839 (53%), Positives = 578/839 (68%)
Query: 1 MENEVVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM 60
ME + VA IGPQ+S +AHV+SH+ NEL+VP+LSF A DP+L++LQ+P+F++T SD + M
Sbjct: 91 METDAVAIIGPQTSIMAHVLSHLANELSVPMLSFTALDPSLSALQFPFFVQTAPSDLFLM 150
Query: 61 HAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA--PFSP--GASRS 116
A+A+++ YYGW EVIA++ DDD RNGI+ LGD L +R KISYKA P + R
Sbjct: 151 RAIAEMISYYGWSEVIALYNDDDNSRNGITALGDELEGRRCKISYKAVLPLDVVITSPRE 210
Query: 117 AINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEP 176
IN L V MESRV +V+ P TG IF A+ LGM YVWIAT WL S+LDS P
Sbjct: 211 IINEL-VKIQGMESRVIIVNTFPKTGKKIFEEAQKLGMMEKGYVWIATTWLTSLLDSVNP 269
Query: 177 VDIDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVA 236
+ T L+GV+ LR HTP++ KK+F++RW L N G N Y LYAYD+VW++A
Sbjct: 270 LPAKTAESLRGVLTLRIHTPNSKKKKDFVARWNKLS---NGTVGLNVYGLYAYDTVWIIA 326
Query: 237 HALDALLNEGGKFTFSNDPKLHDTNGS-MLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A+ LL+ +FS+DPKL G LNL +L +FD G QFL ++ N TG++G+I
Sbjct: 327 RAVKRLLDSRANISFSSDPKLTSMKGGGSLNLGALSIFDQGSQFLDYIVNTNMTGVTGQI 386
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPN-SSSNRHLYSV 354
+F D++++ P+YD++N+ G R+IGYWSN+SGLS++ PE LY K N SSSN+HL +V
Sbjct: 387 QFLPDRSMIQPSYDIINVVDDGFRQIGYWSNHSGLSIIPPESLYKKLSNRSSSNQHLNNV 446
Query: 355 IWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLL 414
WPG + TPRGWVFPNNG LRI VP+R S+ EFV++ V+GY IDVFEAAV L+
Sbjct: 447 TWPGGTSETPRGWVFPNNGRRLRIGVPDRASFKEFVSRLDGSNKVQGYAIDVFEAAVKLI 506
Query: 415 PYPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGL 474
YPVPH ++++G+G +NP +N+ V V + FDA VGDI IVT RT++VDFTQPY+ESGL
Sbjct: 507 SYPVPHEFVLFGDGLKNPNFNEFVNNVTIGVFDAVVGDIAIVTKRTRIVDFTQPYIESGL 566
Query: 475 VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVT 534
VVVAPV KL +PWAFL+PFT PMW VT FFL VG+V+WILEHR N+EFRGPP +Q+VT
Sbjct: 567 VVVAPVTKLNDTPWAFLRPFTPPMWAVTAAFFLIVGSVIWILEHRINDEFRGPPRKQIVT 626
Query: 535 IFWFSFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
I WFSFSTMFFSHRENTVS+LGR SSYTASLTSILTVQQL S I G+
Sbjct: 627 ILWFSFSTMFFSHRENTVSTLGRAVLLIWLFVVLIITSSYTASLTSILTVQQLNSPIRGV 686
Query: 595 DSLISSTEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVD 654
D+LISS+ +G Q GS+A NY++DEL IA SRLV L + +EY+ AL + G VAAIVD
Sbjct: 687 DTLISSSGRVGFQVGSYAENYMIDELNIARSRLVPLGSPKEYAAAL----QNGTVAAIVD 742
Query: 655 ELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHN 714
E PY++LF+S+ C F GQEFT+SGWGFAF RDSPLAID+STAIL LSE G LQKIH+
Sbjct: 743 ERPYVDLFLSEF-CGFAIRGQEFTRSGWGFAFPRDSPLAIDMSTAILGLSETGQLQKIHD 801
Query: 715 KWLTYNECS-MDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQFRRFGXX 773
KWL+ + CS ++ S +D +L L+SFWGLFL+CGI+CF+AL +F ++ F R G
Sbjct: 802 KWLSRSNCSNLNGSVSDEDSEQLKLRSFWGLFLVCGISCFIALFIYFFKIVRDFFRHGKY 861
Query: 774 XXXXXXXXXXAHDXXXXXXXXXXXXXFKDLIDFIDRKEAEIKEILKR-RNSD-NKRPSQ 830
+ + + + D KE E K +KR RN D + +PS+
Sbjct: 862 D----------EEATVPSPESSRSKSLQTFLAYFDEKEDESKRRMKRKRNDDLSLKPSR 910
>TAIR|locus:2081805 [details] [associations]
symbol:GLR3.6 "glutamate receptor 3.6" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] InterPro:IPR001320 InterPro:IPR001638
InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497 PRINTS:PR01176
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0071230
EMBL:AL133452 GO:GO:0004965 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:BT004264 IPI:IPI00517161
PIR:T45779 RefSeq:NP_190716.3 UniGene:At.35384
ProteinModelPortal:Q84W41 EnsemblPlants:AT3G51480.1 GeneID:824311
KEGG:ath:AT3G51480 TAIR:At3g51480 InParanoid:Q84W41 OMA:FTKNGWG
PhylomeDB:Q84W41 ProtClustDB:CLSN2918557 Genevestigator:Q84W41
GermOnline:AT3G51480 Uniprot:Q84W41
Length = 903
Score = 2199 (779.1 bits), Expect = 7.0e-228, P = 7.0e-228
Identities = 422/768 (54%), Positives = 557/768 (72%)
Query: 1 MENEVVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM 60
ME+E VA IGPQ S A V++HV EL +P+LSF ATDPT++ LQ+P+F+RT+Q+D +QM
Sbjct: 91 MESETVAIIGPQRSTTARVVAHVATELKIPILSFSATDPTMSPLQFPFFIRTSQNDLFQM 150
Query: 61 HAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINS 120
A+AD+V++YGWREV+AI+ DDDYGRNG++ LGD LS+KR +ISYKA P +R I
Sbjct: 151 AAIADIVQFYGWREVVAIYGDDDYGRNGVAALGDRLSEKRCRISYKAALPPAPTRENITD 210
Query: 121 LLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDID 180
LL+ L ESR+ VVH + GL +F+VA++LGM + YVWIAT+WL +++D+ P+ +D
Sbjct: 211 LLIKVALSESRIIVVHASFIWGLELFNVARNLGMMSTGYVWIATNWLSTIIDTDSPLPLD 270
Query: 181 TMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHALD 240
T+N +QGV+ LR HTP++ +K+NF+ RW NL + G ++YALYAYD+VWL+A A+D
Sbjct: 271 TINNIQGVITLRLHTPNSIMKQNFVQRWHNLTHV-----GLSTYALYAYDTVWLLAQAID 325
Query: 241 ALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDAD 300
+GG +FS +P + + G L+L +L+VFDGG+ FL+++L+++ GL+G ++F +D
Sbjct: 326 DFFKKGGNVSFSKNPIISELGGGNLHLDALKVFDGGKIFLESILQVDRIGLTGRMKFTSD 385
Query: 301 KNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV-APEILYTKPPNSSSNRHLYSVIWPGE 359
+NLVNPA+DVLN+ GTG IGYW N+SGLSV+ A E+ T S S + L+SV+WPG
Sbjct: 386 RNLVNPAFDVLNVIGTGYTTIGYWFNHSGLSVMPADEMENT----SFSGQKLHSVVWPGH 441
Query: 360 ITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVP 419
PRGWVF NNG LRI VPNR + E V+ KS + G+C+DVF AA+NLLPY VP
Sbjct: 442 SIKIPRGWVFSNNGRHLRIGVPNRYRFEEVVSV-KSNGMITGFCVDVFIAAINLLPYAVP 500
Query: 420 HNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAP 479
+ +GNG NP +++V+ + +DA VGDITI+T RTK+ DFTQPY+ESGLVVVAP
Sbjct: 501 FELVAFGNGHDNPSNSELVRLITTGVYDAGVGDITIITERTKMADFTQPYVESGLVVVAP 560
Query: 480 VQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFS 539
V+KL SS AFL+PFT MWL+ FL VGAV+W LEH+ N+EFRGPP +Q++T FWFS
Sbjct: 561 VRKLGSSAMAFLRPFTPQMWLIAAASFLIVGAVIWCLEHKHNDEFRGPPRRQVITTFWFS 620
Query: 540 FSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLIS 599
FST+FFSHRE T S+LGR NSSYTASLTSILTV QL+S I+GI++L +
Sbjct: 621 FSTLFFSHRETTTSNLGRIVLIIWLFVVLIINSSYTASLTSILTVHQLSSPIKGIETLQT 680
Query: 600 STEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYI 659
+ +PIG GSF +YL+ EL I SRLV L++ EEY AL GP GGVAA+VDE YI
Sbjct: 681 NHDPIGYPQGSFVRDYLIHELNIHVSRLVPLRSPEEYDKALRDGPGKGGVAAVVDERAYI 740
Query: 660 ELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTY 719
ELF+S CEF VGQEFTK+GWGFAF R+SPLA+D+S AILQLSENGD+Q+I +KWL
Sbjct: 741 ELFLSN-RCEFGIVGQEFTKNGWGFAFPRNSPLAVDVSAAILQLSENGDMQRIRDKWLLR 799
Query: 720 NECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQF 767
CS L A+ RL LKSFWGLF++CG+AC LAL + + QF
Sbjct: 800 KACS--LQGAEIEVDRLELKSFWGLFVVCGVACVLALAVYTVLMIRQF 845
>TAIR|locus:2062586 [details] [associations]
symbol:GLR5 "glutamate receptor 5" species:3702
"Arabidopsis thaliana" [GO:0004965 "G-protein coupled GABA receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR002455 Pfam:PF00060 Pfam:PF00497
PRINTS:PR01176 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0009506 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AC005700 GO:GO:0004965
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AF210701
IPI:IPI00548986 PIR:F84732 PIR:T51136 RefSeq:NP_565744.1
UniGene:At.13201 ProteinModelPortal:Q9SDQ4 SMR:Q9SDQ4 IntAct:Q9SDQ4
PaxDb:Q9SDQ4 PRIDE:Q9SDQ4 EnsemblPlants:AT2G32400.1 GeneID:817801
KEGG:ath:AT2G32400 GeneFarm:2534 TAIR:At2g32400 eggNOG:NOG282132
InParanoid:Q9SDQ4 OMA:NSSHRIQ PhylomeDB:Q9SDQ4
ProtClustDB:CLSN2688630 Genevestigator:Q9SDQ4 GermOnline:AT2G32400
Uniprot:Q9SDQ4
Length = 921
Score = 1810 (642.2 bits), Expect = 1.2e-186, P = 1.2e-186
Identities = 373/832 (44%), Positives = 517/832 (62%)
Query: 1 MENEVVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM 60
+E EVVA IGP SS +AH IS + L+ PL+SF ATDPTL++LQ+P+FLRTT +D +QM
Sbjct: 92 LEKEVVAMIGPISSSVAHTISDIAKGLHFPLVSFAATDPTLSALQFPFFLRTTPNDAHQM 151
Query: 61 HAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINS 120
A+ DL+ +YGW+EVI+++ DD+ GRNG+S L D L KKR++ISYK P S + + +
Sbjct: 152 SALVDLINFYGWKEVISVYSDDELGRNGVSALDDELYKKRSRISYKVPLSVHSDEKFLTN 211
Query: 121 LLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDID 180
L + + RV+++H PD L IF +A+ L M YVW+ATDWL LDS D
Sbjct: 212 ALNKSKSIGPRVYILHFGPDPLLRIFDIAQKLQMMTHEYVWLATDWLSVTLDSLS--DKG 269
Query: 181 TMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHALD 240
T+ L+GVV LR H P++ ++F +K S N+YAL+AYD+VW++AH ++
Sbjct: 270 TLKRLEGVVGLRQHIPESVKMEHFT-------HKLQSNRSMNAYALHAYDTVWMIAHGIE 322
Query: 241 ALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDAD 300
LLNEG TFS KL G+ L+L ++ F+ G+ L+ LL++NFTG++G+++F +
Sbjct: 323 ELLNEGINITFSYSEKLLHARGTKLHLEKIKFFNSGELLLEKLLKVNFTGIAGQVQFGSG 382
Query: 301 KNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSS-SNRHLYSVIWPGE 359
+N++ Y+++N+ T +G+WS G SVVAP+ +++ S S+ L + WPG
Sbjct: 383 RNVIGCDYEIINVNKTDVHTVGFWSKNGGFSVVAPKTRHSQKKTSFVSDEKLGDITWPGG 442
Query: 360 ITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDK-SPPGVKGYCIDVFEAAVNLLPYPV 418
PRGWV ++ PL+I VP RVS+ EFV ++K S ++G+CIDVF A+ +PY V
Sbjct: 443 GREKPRGWVIADSADPLKIVVPRRVSFVEFVTEEKNSSHRIQGFCIDVFIEALKFVPYSV 502
Query: 419 PHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVA 478
P+ + +GNG +P YN ++Q V +DAAVGDI IV +R+KLVDF+QPY +GLVVV
Sbjct: 503 PYIFEPFGNGHSSPNYNHLIQMVTDGVYDAAVGDIAIVPSRSKLVDFSQPYASTGLVVVI 562
Query: 479 PVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWF 538
P ++ W FL+PFT +W V FL + V+WILEHR N +FRGPP +QL T+ F
Sbjct: 563 PAND-DNATWIFLRPFTSRLWCVVLVSFLVIAVVIWILEHRINEDFRGPPRRQLSTMLLF 621
Query: 539 SFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLI 598
SFST+F ++E+T+S+L R +SYTA+LTSILTVQQL S I GIDSL
Sbjct: 622 SFSTLFKRNQEDTISNLARLVMIVWLFLLMVLTASYTANLTSILTVQQLPSAITGIDSLR 681
Query: 599 SSTEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKG-GGVAAIVDELP 657
+S PIG Q G+F YL L +A SRLV L + EEY AL GP GGVAAIVDELP
Sbjct: 682 ASEVPIGYQAGTFTLEYLTYSLGMARSRLVPLDSTEEYEKALKLGPTNWGGVAAIVDELP 741
Query: 658 YIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWL 717
YIELF+++ F+ VG+ F GWGFAF+RDSPLAID+STAIL+LSE LQ+I KWL
Sbjct: 742 YIELFLAERT-GFKIVGEPFMHRGWGFAFKRDSPLAIDMSTAILKLSETRKLQEIRKKWL 800
Query: 718 TYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQFRRFGXXXXXX 777
C+ S + ++L LKSF GL+L+C A + F R+ QF R+
Sbjct: 801 CKTNCA-GKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFLVFVLRMIRQFVRYRRMERTS 859
Query: 778 XXXXXXAHDXXXXXXXXXXXXXFKDLIDFIDRKEAEIKEILKRRNSDNKRPS 829
F D ++F+D KE IK + +R + N PS
Sbjct: 860 SMPRAS---WSASPTLRLRELVF-DFVEFVDEKEEAIKRMFRRSDDSNNNPS 907
>TAIR|locus:2047256 [details] [associations]
symbol:GLR2.2 "glutamate receptor 2.2" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] InterPro:IPR001320 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262
GO:GO:0019722 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
EMBL:AC007266 GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558
KO:K05387 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 ProtClustDB:CLSN2683132 EMBL:AY072068
IPI:IPI00519275 PIR:B84640 RefSeq:NP_180048.1 UniGene:At.39113
ProteinModelPortal:Q9SHV1 PRIDE:Q9SHV1 EnsemblPlants:AT2G24720.1
GeneID:817008 KEGG:ath:AT2G24720 TAIR:At2g24720 eggNOG:NOG288203
InParanoid:Q9SHV1 OMA:EMPENSN PhylomeDB:Q9SHV1
Genevestigator:Q9SHV1 GermOnline:AT2G24720 Uniprot:Q9SHV1
Length = 920
Score = 1238 (440.9 bits), Expect = 4.8e-126, P = 4.8e-126
Identities = 280/773 (36%), Positives = 426/773 (55%)
Query: 4 EVVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQMHAV 63
+V A +GP +S AH + + + VP++S+ AT P+LTSL+ PYF R T D Q+HA+
Sbjct: 96 QVKAILGPWTSMQAHFLIEIGQKSRVPVVSYSATSPSLTSLRSPYFFRATYEDSSQVHAI 155
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
+++ +GWREV+ +++D+ +G + L D+L +I Y++ A+ I+ L+
Sbjct: 156 KAIIKLFGWREVVPVYIDNTFGEGIMPRLTDSLQDINVRIPYRSVIPLNATDQDISVELL 215
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
M +RVF+VH++ T+F AK LG+ YVWI T+ V+D ++ +
Sbjct: 216 KMMNMPTRVFIVHMSSSLASTVFIKAKELGLMKPGYVWILTN---GVMDGLRSINETGIE 272
Query: 184 LLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHAL-DAL 242
++GV+ ++ + P + + F SRWK ++ + N Y L+AYD+ +A A+ DA
Sbjct: 273 AMEGVLGIKTYIPKSKDLETFRSRWKR-RFPQME---LNVYGLWAYDATTALAMAIEDAG 328
Query: 243 LNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKN 302
+N TFSN DT ++ L L + G + LQT+ + F GL+G+ F + +
Sbjct: 329 INN---MTFSNV----DTGKNVSELDGLGLSQFGPKLLQTVSTVQFKGLAGDFHFVSGQ- 380
Query: 303 LVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVIWPGEITA 362
L ++++N+ GTG R IG+W+ +GL + + S+ HL +IWPGE +
Sbjct: 381 LQPSVFEIVNMIGTGERSIGFWTEGNGLVKKLDQEPRSIGTLSTWPDHLKHIIWPGEAVS 440
Query: 363 TPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSP----PGVKGYCIDVFEAAVNLLPYPV 418
P+GW P NG LRI VP R+ + + V + P VKG+CID FEA + +PY V
Sbjct: 441 VPKGWEIPTNGKKLRIGVPKRIGFTDLVKVTRDPITNSTVVKGFCIDFFEAVIQAMPYDV 500
Query: 419 PHNYIMYG--NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVV 476
+ + + NG+ +ND+V QV L +FDA VGD TI+ NR+ VDFT P+M+SG+ +
Sbjct: 501 SYEFFPFEKPNGEPAGNHNDLVHQVYLGQFDAVVGDTTILANRSSFVDFTLPFMKSGVGL 560
Query: 477 VAPVQ-KLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTI 535
+ P++ ++K ++FLKP +I +WL T FF VG VW LEHR N++FRGP + Q TI
Sbjct: 561 IVPLKDEVKRDKFSFLKPLSIELWLTTLVFFFLVGISVWTLEHRVNSDFRGPANYQASTI 620
Query: 536 FWFSFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
FWF+FSTM F+ RE +S R SYTASL S+LT QQL I +
Sbjct: 621 FWFAFSTMVFAPRERVLSFGARSLVVTWYFVLLVLTQSYTASLASLLTSQQLNPTITSMS 680
Query: 596 SLISSTEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDE 655
SL+ E +G Q SF L +E +S LV EE L +GPK GGVAA
Sbjct: 681 SLLHRGETVGYQRTSFILGKL-NETGFPQSSLVPFDTAEECDELLKKGPKNGGVAAAFLG 739
Query: 656 LPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNK 715
PY+ LF+ + ++ V + F G+GF F SPL D+S AIL+++E+ ++ +
Sbjct: 740 TPYVRLFLGQYCNTYKMVEEPFNVDGFGFVFPIGSPLVADVSRAILKVAESPKAVELEHA 799
Query: 716 WLTYNE--CSMDLSPADGGGS----RLSLKSFWGLFLICGIACFLAL-IFFFC 761
W E C ++ D + +L + SFW LFL+ + C LAL F FC
Sbjct: 800 WFKKKEQSCPDPVTNPDSNPTVTAIQLGVGSFWFLFLVVFVVCVLALGKFTFC 852
>TAIR|locus:2066086 [details] [associations]
symbol:GLR2.8 "glutamate receptor 2.8" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828 GO:GO:0071230
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 eggNOG:NOG263961
ProtClustDB:CLSN2683703 EMBL:AJ311495 IPI:IPI00537052 PIR:T02741
RefSeq:NP_180475.2 UniGene:At.13039 ProteinModelPortal:Q9C5V5
EnsemblPlants:AT2G29110.1 GeneID:817459 KEGG:ath:AT2G29110
TAIR:At2g29110 InParanoid:Q9C5V5 OMA:DSEDSIW PhylomeDB:Q9C5V5
Genevestigator:Q9C5V5 GermOnline:AT2G29110 Uniprot:Q9C5V5
Length = 947
Score = 1166 (415.5 bits), Expect = 2.0e-118, P = 2.0e-118
Identities = 276/770 (35%), Positives = 418/770 (54%)
Query: 1 MENEVVAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQ 59
++NE V+AI GP S A + + N+ VP +SF AT P LTS++ YF+R T D YQ
Sbjct: 93 IQNEQVSAIIGPIDSMQAKFMIKLANKTQVPTISFSATSPLLTSIKSDYFVRGTIDDSYQ 152
Query: 60 MHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAIN 119
+ A+A + E +GWR V+AI+VD++ G + L DAL + S P A+ I
Sbjct: 153 VKAIAAIFESFGWRSVVAIYVDNELGEGIMPYLFDALQDVQVDRSV-IPSE--ANDDQIL 209
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
L ++RVFVVH+ IF A +GM YVW+ T+ + ++
Sbjct: 210 KELYKLMTRQTRVFVVHMASRLASRIFEKATEIGMMEEGYVWLMTNGMTHMMRHIHHGR- 268
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSP---SGFNSYALYAYDSVWLVA 236
++N + GV+ +R H P + ++F RWK +K+ +P + + L+AYDS +A
Sbjct: 269 -SLNTIDGVLGVRSHVPKSKGLEDFRLRWKR-NFKKENPWLRDDLSIFGLWAYDSTTALA 326
Query: 237 HALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIR 296
A++ F ++N ++ +M +L +L V G L+ L + F GL+G R
Sbjct: 327 MAVEK--TNISSFPYNN---ASGSSNNMTDLGTLHVSRYGPSLLEALSEIRFNGLAG--R 379
Query: 297 FDA-DKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVI 355
F+ D+ L +P ++++N G R +G+W+ +GL V + S + +I
Sbjct: 380 FNLIDRQLESPKFEIINFVGNEERIVGFWTPSNGLVNVN-----SNKTTSFTGERFGPLI 434
Query: 356 WPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSP-PGV---KGYCIDVFEAAV 411
WPG+ T P+GW P NG +++ VP + + FV P + KGY ID+FEAA+
Sbjct: 435 WPGKSTIVPKGWEIPTNGKKIKVGVPVKKGFFNFVEVITDPITNITTPKGYAIDIFEAAL 494
Query: 412 NLLPYPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYME 471
LPY V Y + + + Y+D+V +V DA VGD+TI R+ DFT PY E
Sbjct: 495 KKLPYSVIPQYYRFESPDDD--YDDLVYKVDNGTLDAVVGDVTITAYRSLYADFTLPYTE 552
Query: 472 SGLVVVAPVQKLKS-SPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQ 530
SG+ ++ PV+ ++ + W FLKP+ + +W+ T FF+ +G VVW+ EHR N +FRGPP
Sbjct: 553 SGVSMMVPVRDNENKNTWVFLKPWGLDLWVTTACFFVLIGFVVWLFEHRVNTDFRGPPHH 612
Query: 531 QLVTIFWFSFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
Q+ T FWFSFSTM F+HRE VS+L R SYTA+LTS LTVQ+
Sbjct: 613 QIGTSFWFSFSTMVFAHREKVVSNLARFVVVVWCFVVLVLTQSYTANLTSFLTVQRFQPA 672
Query: 591 IEGIDSLISSTEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVA 650
+ LI + + +G Q G+F ++L+ E S+L + EE L+ G ++
Sbjct: 673 AINVKDLIKNGDYVGYQHGAFVKDFLIKE-GFNVSKLKPFGSSEECHALLSNG----SIS 727
Query: 651 AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQ 710
A DE+ Y+ +S+ ++ V F +G+GFAF R+SPL D+S AIL +++ ++Q
Sbjct: 728 AAFDEVAYLRAILSQYCSKYAIVEPTFKTAGFGFAFPRNSPLTGDVSKAILNVTQGDEMQ 787
Query: 711 KIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFF 759
I NKW + N+C D A +RLSL+SFWGLFLI GIA FLAL+ F
Sbjct: 788 HIENKWFMKQNDCP-DPKTALSS-NRLSLRSFWGLFLIAGIASFLALLIF 835
>TAIR|locus:2181196 [details] [associations]
symbol:GLR2.1 "glutamate receptor 2.1" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030003 "cellular cation homeostasis" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AF007271 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
EMBL:AK228008 IPI:IPI00532199 PIR:T01809 RefSeq:NP_198062.2
UniGene:At.30826 ProteinModelPortal:O04660 IntAct:O04660
PaxDb:O04660 EnsemblPlants:AT5G27100.1 GeneID:832768
KEGG:ath:AT5G27100 TAIR:At5g27100 eggNOG:NOG323745
InParanoid:O04660 OMA:GWREVAP PhylomeDB:O04660
ProtClustDB:CLSN2683132 Genevestigator:O04660 GermOnline:AT5G27100
Uniprot:O04660
Length = 901
Score = 1147 (408.8 bits), Expect = 2.1e-116, P = 2.1e-116
Identities = 270/769 (35%), Positives = 409/769 (53%)
Query: 4 EVVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQMHAV 63
EV A +GP +S A + + + VP++++ AT P+L S++ YF R T D Q+HA+
Sbjct: 96 EVKAILGPWTSMQAQFMIEMGQKSQVPIVTYSATSPSLASIRSQYFFRATYDDSSQVHAI 155
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
++++ +GWREV ++VDD +G + L D L + +I Y+ SP A+ I+ L+
Sbjct: 156 KEIIKLFGWREVAPVYVDDTFGEGIMPRLTDVLQEINVRIPYRTVISPNATDDEISVELL 215
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ +RVFVVH+ F+ A +G+ YVWI T+ + VL +I+TM
Sbjct: 216 RMMTLPTRVFVVHLVELLASRFFAKATEIGLMKQGYVWILTNTITDVLSIMNETEIETM- 274
Query: 184 LLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHALDALL 243
QGV+ ++ + P + +NF SRW K S N Y L+AYD+ +A A++
Sbjct: 275 --QGVLGVKTYVPRSKELENFRSRWT----KRFPISDLNVYGLWAYDATTALALAIE--- 325
Query: 244 NEGG--KFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADK 301
E G TF K+ D ++ L L V G + LQTL R+ F GL+G+ +F +
Sbjct: 326 -EAGTSNLTFV---KM-DAKRNVSELQGLGVSQYGPKLLQTLSRVRFQGLAGDFQF-ING 379
Query: 302 NLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVIWPGEIT 361
L ++++N+ G G R IG+W GL + +K SS L +IWPG+ T
Sbjct: 380 ELQPSVFEIVNVNGQGGRTIGFWMKEYGLFKNVDQKPASKTTFSSWQDRLRPIIWPGDTT 439
Query: 362 ATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPG----VKGYCIDVFEAAVNLLPYP 417
+ P+GW P NG L+I VP ++ +FV + P G+ ID FEA + +PY
Sbjct: 440 SVPKGWEIPTNGKRLQIGVPVNNTFQQFVKATRDPITNSTIFSGFSIDYFEAVIQAIPYD 499
Query: 418 VPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVV 477
+ +++I + +G Y+ +V QV L K+DA V D TI +NR+ VDF+ PY SG+ +V
Sbjct: 500 ISYDFIPFQDGG----YDALVYQVYLGKYDAVVADTTISSNRSMYVDFSLPYTPSGVGLV 555
Query: 478 APVQ-KLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIF 536
PV+ ++ S FL P T+ +WL++ F +G VVW+LEHR N +F GP QL TIF
Sbjct: 556 VPVKDSVRRSSTIFLMPLTLALWLISLLSFFIIGLVVWVLEHRVNPDFDGPGQYQLSTIF 615
Query: 537 WFSFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS 596
WFSFS M F+ RE +S R SYTASL S+LT Q L + I+S
Sbjct: 616 WFSFSIMVFAPRERVLSFWARVVVIIWYFLVLVLTQSYTASLASLLTTQHLHPTVTNINS 675
Query: 597 LISSTEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDEL 656
L++ E +G Q SF L D +E+ LV + E L++G GGV+A++ E+
Sbjct: 676 LLAKGESVGYQS-SFILGRLRDS-GFSEASLVSYGSPEHCDALLSKGQAEGGVSAVLMEV 733
Query: 657 PYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKW 716
PY+ +F+ + +++ V F G GF F SPL D+S AIL++ E+ ++ N W
Sbjct: 734 PYVRIFLGQYCNKYKMVQTPFKVDGLGFVFPIGSPLVADISRAILKVEESNKANQLENAW 793
Query: 717 LT-YNE-CSMDLSPADGGGS----RLSLKSFWGLFLICGIACFLALIFF 759
+E C L+ D S +L SFW LFL+ I C +AL+ F
Sbjct: 794 FKPIDESCPDPLTNPDPNPSVSFRQLGFDSFWVLFLVAAIVCTMALLKF 842
>TAIR|locus:2047251 [details] [associations]
symbol:GLR2.3 "glutamate receptor 2.3" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 EMBL:AC007266 GO:GO:0071230
eggNOG:COG0683 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
ProtClustDB:CLSN2683132 IPI:IPI00526740 PIR:A84640
RefSeq:NP_180047.1 UniGene:At.52897 ProteinModelPortal:Q9SHV2
PaxDb:Q9SHV2 PRIDE:Q9SHV2 EnsemblPlants:AT2G24710.1 GeneID:817007
KEGG:ath:AT2G24710 TAIR:At2g24710 InParanoid:Q9SHV2 OMA:QASTICW
PhylomeDB:Q9SHV2 Genevestigator:Q9SHV2 GermOnline:AT2G24710
Uniprot:Q9SHV2
Length = 895
Score = 1143 (407.4 bits), Expect = 5.6e-116, P = 5.6e-116
Identities = 273/777 (35%), Positives = 414/777 (53%)
Query: 4 EVVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQMHAV 63
+V A +GP +S AH + + + VP++S+ AT P LTSL+ PYFLR T D +Q+ +
Sbjct: 95 QVKAILGPWTSMQAHFLIEIGQKSRVPIVSYSATSPILTSLRSPYFLRATYEDSFQVQPI 154
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
+++ +GWREV+ +++D+ +G + L DAL +I Y++ + A+ I+ L+
Sbjct: 155 KAIIKLFGWREVVPVYIDNTFGEGIMPRLTDALQDINVRIPYRSVIAINATDHEISVELL 214
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
M +RVF+VH+ D F AK LG+ YVWI T+ V+D ++ +
Sbjct: 215 KMMNMPTRVFLVHMYYDLASRFFIKAKELGLMEPGYVWILTN---GVIDDLSLINETAVE 271
Query: 184 LLQGVVALRHHTPDT-DLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHALDAL 242
++GV+ ++ + P + DL+K F SRW++L + + Y L+AYD+ +A A++
Sbjct: 272 AMEGVLGIKTYIPKSPDLEK-FRSRWRSLFPRVE----LSVYGLWAYDATTALAVAIE-- 324
Query: 243 LNEGG--KFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDAD 300
E G TFS K+ DT ++ L +L + G + LQTLL + F GL+GE RF
Sbjct: 325 --EAGTNNMTFS---KVVDTGRNVSELEALGLSQFGPKLLQTLLTVQFRGLAGEFRFFRG 379
Query: 301 KNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVIWPGEI 360
+ L ++++NI TG + IG+W +GL + + S+ HL ++WPGE
Sbjct: 380 Q-LQPSVFEIVNIINTGEKSIGFWKEGNGLVKKLDQQASSISALSTWKDHLKHIVWPGEA 438
Query: 361 TATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSP----PGVKGYCIDVFEAAVNLLPY 416
+ P+GW P G LRI VP R Y + V + P V G+CID FEA + LPY
Sbjct: 439 DSVPKGWQIPTKGKKLRIGVPKRTGYTDLVKVTRDPITNSTVVTGFCIDFFEAVIRELPY 498
Query: 417 PVPHNYIMYG--NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGL 474
V + +I + +GK YND+V QV L ++DA VGD TI+ NR+ VDFT P+++SG+
Sbjct: 499 DVSYEFIPFEKPDGKTAGNYNDLVYQVYLGRYDAVVGDTTILVNRSSYVDFTFPFIKSGV 558
Query: 475 -VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLV 533
++V +K F+KP + +WL + F VG VW+LE++ N +F GPP Q
Sbjct: 559 GLIVEMTDPVKRDYILFMKPLSWKLWLTSFISFFLVGCTVWVLEYKRNPDFSGPPRFQAS 618
Query: 534 TIFWFSFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
TI WF+FSTM F+ RE S R SYTASL S+LT Q+L I
Sbjct: 619 TICWFAFSTMVFAPRERVFSFWARALVIAWYFLVLVLTQSYTASLASLLTSQKLNPTITS 678
Query: 594 IDSLISSTEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIV 653
+ SL+ E +G Q SF L E +S LV EE L++GPK GGV+
Sbjct: 679 MSSLLEKGETVGYQRTSFILGKL-KERGFPQSSLVPFDTAEECDELLSKGPKKGGVSGAF 737
Query: 654 DELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIH 713
E+PY+ LF+ + ++ V + F G+GF F SPL D+S AIL+++E+ ++
Sbjct: 738 LEIPYLRLFLGQFCNTYKMVEEPFNVDGFGFVFPIGSPLVADVSRAILKVAESPKAMELE 797
Query: 714 NKWLTYNE--CSMDLSPADGGGS----RLSLKSFWGLFLICGI--ACFLAL-IFFFC 761
W E C ++ D S +L + SF LFL G+ C +AL F +C
Sbjct: 798 RAWFKKKEQSCPDPITNPDPNPSFTSRQLDIDSF--LFLFVGVLLVCVMALGNFTYC 852
>TAIR|locus:2066107 [details] [associations]
symbol:GLR2.7 "glutamate receptor 2.7" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005773 "vacuole" evidence=IDA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0034976 "response
to endoplasmic reticulum stress" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 GO:GO:0005773
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 GO:GO:0008066
GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY495450
EMBL:AY072069 EMBL:AY080587 IPI:IPI00533666 PIR:T02742
RefSeq:NP_180476.3 UniGene:At.38520 ProteinModelPortal:Q8LGN0
PaxDb:Q8LGN0 PRIDE:Q8LGN0 EnsemblPlants:AT2G29120.1 GeneID:817460
KEGG:ath:AT2G29120 TAIR:At2g29120 eggNOG:NOG263961
InParanoid:Q8LGN0 OMA:DSENSFR PhylomeDB:Q8LGN0
ProtClustDB:CLSN2683703 Genevestigator:Q8LGN0 Uniprot:Q8LGN0
Length = 952
Score = 1019 (363.8 bits), Expect = 7.7e-103, P = 7.7e-103
Identities = 237/634 (37%), Positives = 353/634 (55%)
Query: 1 MENEVVAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQ 59
++NE V+AI GP++S A + + ++ VP ++F AT P LTS+ PYF+R T D Q
Sbjct: 99 IKNEQVSAIIGPRTSMQAEFMIRLADKSQVPTITFSATCPLLTSINSPYFVRATLDDSSQ 158
Query: 60 MHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAIN 119
+ A+A +V+ +GWR V+AI+VD+++G + +L DAL +A + + A+ I
Sbjct: 159 VKAIAAIVKSFGWRNVVAIYVDNEFGEGILPLLTDALQDVQAFVVNRCLIPQEANDDQIL 218
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
L M++RVFVVH+ P G F A+ +GM YVW+ TD + ++L S E
Sbjct: 219 KELYKLMTMQTRVFVVHMPPTLGFRFFQKAREIGMMEEGYVWLLTDGVMNLLKSNERGS- 277
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHAL 239
++ +QGV+ +R H P + KNF RW+ + K+ + N +AL AYDS+ +A A+
Sbjct: 278 -SLENMQGVLGVRSHIPKSKKLKNFRLRWEKMFPKKGNDEEMNIFALRAYDSITALAMAV 336
Query: 240 DALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDA 299
+ + ++ D + N NL +L V G L+ L + F GL+GE
Sbjct: 337 EKTNIKSLRY----DHPIASGNNKT-NLGTLGVSRYGPSLLKALSNVRFNGLAGEFEL-I 390
Query: 300 DKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSS--NRHLYSVIWP 357
+ L + +DV+NI G+ R IG W +G I+ K N++S L VIWP
Sbjct: 391 NGQLESSVFDVINIIGSEERIIGLWRPSNG-------IVNAKSKNTTSVLGERLGPVIWP 443
Query: 358 GEITATPRGWVFPNNGMPLRIAVPNRVSYNEFV-AK-DKSPPGVK--GYCIDVFEAAVNL 413
G+ P+GW P NG LR+ +P + + EFV AK D + GYCI++FEA +
Sbjct: 444 GKSKDVPKGWQIPTNGKMLRVGIPVKKGFLEFVDAKIDPISNAMTPTGYCIEIFEAVLKK 503
Query: 414 LPYPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESG 473
LPY V YI + + N Y+++V QV +DA VGD+TIV NR+ VDFT PY ESG
Sbjct: 504 LPYSVIPKYIAFLSPDEN--YDEMVYQVYTGAYDAVVGDVTIVANRSLYVDFTLPYTESG 561
Query: 474 LVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLV 533
+ ++ P++ K++ W FL+P+++ +W+ T FF+F+G +VWILEHR N +FRGPP Q+
Sbjct: 562 VSMMVPLKDNKNT-WVFLRPWSLDLWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIG 620
Query: 534 TIFWFSFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
T FWF+FSTM F+HRE VS+L R SYTA+LTS TV+ L +
Sbjct: 621 TSFWFAFSTMNFAHREKVVSNLARFVVLVWCFVVLVLIQSYTANLTSFFTVKLLQPTVTN 680
Query: 594 IDSLISSTEPIGVQDGSFAWNYLVDELKIAESRL 627
LI + IG Q G+F L + ES+L
Sbjct: 681 WKDLIKFNKNIGYQRGTFVRELLKSQ-GFDESQL 713
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 221/582 (37%), Positives = 321/582 (55%)
Query: 185 LQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHALDALLN 244
+QGV+ +R H P + KNF RW+ + K+ + N +AL AYDS+ +A A++
Sbjct: 282 MQGVLGVRSHIPKSKKLKNFRLRWEKMFPKKGNDEEMNIFALRAYDSITALAMAVEKTNI 341
Query: 245 EGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLV 304
+ ++ D + N NL +L V G L+ L + F GL+GE + L
Sbjct: 342 KSLRY----DHPIASGNNKT-NLGTLGVSRYGPSLLKALSNVRFNGLAGEFEL-INGQLE 395
Query: 305 NPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSS--NRHLYSVIWPGEITA 362
+ +DV+NI G+ R IG W +G I+ K N++S L VIWPG+
Sbjct: 396 SSVFDVINIIGSEERIIGLWRPSNG-------IVNAKSKNTTSVLGERLGPVIWPGKSKD 448
Query: 363 TPRGWVFPNNGMPLRIAVPNRVSYNEFV-AK-DKSPPGVK--GYCIDVFEAAVNLLPYPV 418
P+GW P NG LR+ +P + + EFV AK D + GYCI++FEA + LPY V
Sbjct: 449 VPKGWQIPTNGKMLRVGIPVKKGFLEFVDAKIDPISNAMTPTGYCIEIFEAVLKKLPYSV 508
Query: 419 PHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVA 478
YI + + N Y+++V QV +DA VGD+TIV NR+ VDFT PY ESG+ ++
Sbjct: 509 IPKYIAFLSPDEN--YDEMVYQVYTGAYDAVVGDVTIVANRSLYVDFTLPYTESGVSMMV 566
Query: 479 PVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWF 538
P++ K++ W FL+P+++ +W+ T FF+F+G +VWILEHR N +FRGPP Q+ T FWF
Sbjct: 567 PLKDNKNT-WVFLRPWSLDLWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIGTSFWF 625
Query: 539 SFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLI 598
+FSTM F+HRE VS+L R SYTA+LTS TV+ L + LI
Sbjct: 626 AFSTMNFAHREKVVSNLARFVVLVWCFVVLVLIQSYTANLTSFFTVKLLQPTVTNWKDLI 685
Query: 599 SSTEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPY 658
+ IG Q G+F L + ES+L + E + G + A DE+ Y
Sbjct: 686 KFNKNIGYQRGTFVRELLKSQ-GFDESQLKPFGSAVECDELFSNGT----ITASFDEVAY 740
Query: 659 IELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT 718
I++ +S+ + ++ V F +G+GF F + SPL D+S AIL +++ ++Q I NKW
Sbjct: 741 IKVILSQNSSKYTMVEPSFKTAGFGFVFPKKSPLTDDVSRAILNVTQGEEMQHIENKWFK 800
Query: 719 Y-NECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFF 759
N C DL+ + + LSL SFWGLFLI GIA FLAL+ F
Sbjct: 801 KPNNCP-DLNTSLSS-NHLSLSSFWGLFLIAGIASFLALLIF 840
>TAIR|locus:2066148 [details] [associations]
symbol:GLR2.9 "glutamate receptor 2.9" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030003 "cellular cation homeostasis" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005262 GO:GO:0019722
GO:GO:0035235 GO:GO:0030288 EMBL:AC005315 InterPro:IPR001828
GO:GO:0071230 GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
eggNOG:NOG263961 ProtClustDB:CLSN2683703 IPI:IPI00520184 PIR:T02740
RefSeq:NP_180474.1 UniGene:At.52963 ProteinModelPortal:O81078
IntAct:O81078 PaxDb:O81078 PRIDE:O81078 EnsemblPlants:AT2G29100.1
GeneID:817458 KEGG:ath:AT2G29100 TAIR:At2g29100 InParanoid:O81078
OMA:WIFTESA PhylomeDB:O81078 Genevestigator:O81078
GermOnline:AT2G29100 Uniprot:O81078
Length = 940
Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
Identities = 229/644 (35%), Positives = 351/644 (54%)
Query: 127 LME--SRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNL 184
LME +RVFVVH+ L +F +A+ +GM YVW+ T+ + ++ + ++N
Sbjct: 212 LMERQARVFVVHMESSLALRVFQIARDIGMMEEGYVWLMTNGMTHMMRHIN--NGRSLNT 269
Query: 185 LQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPS---GFNSYALYAYDSVWLVAHALDA 241
++GV+ +R H P + +F RWK KEN PS N +AL+AYDS+ +A A++
Sbjct: 270 IEGVLGVRSHVPKSKELGDFRLRWKRTFEKEN-PSMRDDLNVFALWAYDSITALAKAVEK 328
Query: 242 LLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADK 301
+ + N L + N+ + ++ G + + F GL+GE + D
Sbjct: 329 ANTKS--LWYDNGSTLSKNRTDLGNVG-VSLY--GPSLQKAFSEVRFNGLAGEFKL-IDG 382
Query: 302 NLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVIWPGEIT 361
L +P ++++N G R IG+W+ GL SS+ + L VIWPG+
Sbjct: 383 QLQSPKFEIINFVGNEERIIGFWTPRDGLM----------DATSSNKKTLGPVIWPGKSK 432
Query: 362 ATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVK----GYCIDVFEAAVNLLPYP 417
P+GW P G LR+ VP + + +FV +P K GY I++FEAA+ LPY
Sbjct: 433 IVPKGWEIP--GKKLRVGVPMKKGFFDFVKVTINPITNKKTPTGYAIEIFEAALKELPYL 490
Query: 418 VPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVV 477
V Y+ + N YN++V QV +DA VGDITI NR+ DFT P+ ESG+ ++
Sbjct: 491 VIPEYVSF-ESPNN--YNNLVYQVYDKTWDAVVGDITITANRSLYADFTLPFTESGVSMM 547
Query: 478 APVQKLKSSP-WAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIF 536
PV+ ++ W FL+P+++ +W+ TG FF+F+G VVW+ EHR N +FRGPP Q+ T
Sbjct: 548 VPVRDNENKDTWVFLEPWSLELWVTTGCFFVFIGFVVWLFEHRVNTDFRGPPQYQIGTSL 607
Query: 537 WFSFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS 596
WFSFSTM F+HREN VS+L R SYTASLTS LTVQ L + ++
Sbjct: 608 WFSFSTMVFAHRENVVSNLARFVVVVWCFVVLVLTQSYTASLTSFLTVQSLQPTVTNVND 667
Query: 597 LISSTEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDEL 656
LI + + +G Q G+F + L+ L E +L + ++ L++G K G+AA DE+
Sbjct: 668 LIKNRDCVGYQGGAFVKDILLG-LGFHEDQLKPFDSAKDADDLLSKG-KSKGIAAAFDEV 725
Query: 657 PYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKW 716
Y++ +S++ ++ V F G+GFAF ++SPL + S AIL L++N Q+I ++W
Sbjct: 726 AYLKAILSQSCSKYVMVEPTFKTGGFGFAFPKNSPLTGEFSRAILNLTQNNVTQQIEDRW 785
Query: 717 LTY-NECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFF 759
N+C ++ +RL+L SF GLFLI G A +L+ F
Sbjct: 786 FPKKNDCPDPMTALSS--NRLNLSSFLGLFLIAGTAISFSLLVF 827
Score = 424 (154.3 bits), Expect = 2.1e-36, P = 2.1e-36
Identities = 105/332 (31%), Positives = 173/332 (52%)
Query: 4 EVVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQMHAV 63
+V A IGP +S A + + N+ VP ++F AT P LTS++ PYF+R T D Q+ A+
Sbjct: 94 QVSAIIGPINSMQADFMIKLANKTQVPTITFSATSPLLTSIKSPYFVRATIDDSSQVRAI 153
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
A + +++ WR V+AI+VD+++G + L DAL K ++ P A I L
Sbjct: 154 ASIFKFFRWRRVVAIYVDNEFGEGFMPFLFDALQDVEVK---RSVIPPEAIDDEIQKEL- 209
Query: 124 GANLME--SRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
LME +RVFVVH+ L +F +A+ +GM YVW+ T+ + ++ + +
Sbjct: 210 -RKLMERQARVFVVHMESSLALRVFQIARDIGMMEEGYVWLMTNGMTHMMRHIN--NGRS 266
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPS---GFNSYALYAYDSVWLVAHA 238
+N ++GV+ +R H P + +F RWK KEN PS N +AL+AYDS+ +A A
Sbjct: 267 LNTIEGVLGVRSHVPKSKELGDFRLRWKRTFEKEN-PSMRDDLNVFALWAYDSITALAKA 325
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFD 298
++ + + N L + N+ + ++ G + + F GL+GE +
Sbjct: 326 VEKANTKS--LWYDNGSTLSKNRTDLGNVG-VSLY--GPSLQKAFSEVRFNGLAGEFKL- 379
Query: 299 ADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGL 330
D L +P ++++N G R IG+W+ GL
Sbjct: 380 IDGQLQSPKFEIINFVGNEERIIGFWTPRDGL 411
>TAIR|locus:2079681 [details] [associations]
symbol:GLR1.4 "glutamate receptor 1.4" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005576 "extracellular
region" evidence=ISM] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=NAS] [GO:0009416 "response to light
stimulus" evidence=NAS] [GO:0005261 "cation channel activity"
evidence=IDA] [GO:0005262 "calcium channel activity" evidence=IDA]
[GO:0006816 "calcium ion transport" evidence=IDA] [GO:0030003
"cellular cation homeostasis" evidence=RCA;IDA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AC009853 GO:GO:0030003
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
ProtClustDB:CLSN2684267 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY072066 EMBL:AY072067
IPI:IPI00529459 RefSeq:NP_187408.2 UniGene:At.40336
ProteinModelPortal:Q8LGN1 STRING:Q8LGN1 PaxDb:Q8LGN1 PRIDE:Q8LGN1
EnsemblPlants:AT3G07520.1 GeneID:819940 KEGG:ath:AT3G07520
TAIR:At3g07520 eggNOG:NOG295667 InParanoid:Q8LGN1 OMA:NENIGFF
PhylomeDB:Q8LGN1 ArrayExpress:Q8LGN1 Genevestigator:Q8LGN1
GermOnline:AT3G07520 Uniprot:Q8LGN1
Length = 861
Score = 643 (231.4 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 168/480 (35%), Positives = 248/480 (51%)
Query: 290 GLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
GLSG+I+F DK ++ ++++N+ G G R +G W++ S +S + SS +
Sbjct: 367 GLSGDIKF-IDKKFISDKFEIVNMIGRGERSVGLWNSGSFIS--------NRRRRLSSTK 417
Query: 350 HLYSVIWPGEITATP--RGWVFPNNGMP--LRIAVP-NRVSYNEFVAKDKSPPGVK---G 401
L ++IWPG T P R +G LR+ VP ++ K GV G
Sbjct: 418 ALETIIWPGGSTRIPKIRSLKEKRHGKKKKLRVLVPAGNITPQILEVKTDFKTGVTAATG 477
Query: 402 YCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPIYNDIVQQV--ALNKFDAAVGDITIVTNR 459
YCIDVFE ++ LP+ YI + YND+V + +K+DAAVGDITI NR
Sbjct: 478 YCIDVFETSI--LPFNYEVEYIPWPGAINYKNYNDLVYTLYSQKDKYDAAVGDITITDNR 535
Query: 460 TKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHR 519
+ VDFT P+ + GL VV K S W KP T+ +WL FF+ GA+VW++E
Sbjct: 536 SLYVDFTLPFTDMGLAVVTAKDK---SMWIIFKPLTLSLWLTIASFFILTGAIVWLIERH 592
Query: 520 FNNEFRGPPSQQLVTIFWFSFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLT 579
N +F+G QQ+ T+ F FST+ F+HRE ++ R S+YTA+LT
Sbjct: 593 DNADFQGSCFQQIGTLLCFGFSTLVFAHRERLQHNMSRFVVIVWIFAVLILTSNYTATLT 652
Query: 580 SILTVQQLTSQIEGIDSLISSTEPIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA 639
S++TVQQ I G+ S E IG S A N + D R LK ++++ A
Sbjct: 653 SVMTVQQ----IRGL----KSNENIGFFSASIAANVVNDNPTFQGPRYKGLKTADDFTNA 704
Query: 640 LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTA 699
L + G ++ IVDE+PY++LF++K EF V E +G+GFAFQ+ SPL +S
Sbjct: 705 L----RNGTISFIVDEVPYVKLFVAKHPSEFVIVETESVTNGFGFAFQKGSPLVQKVSRE 760
Query: 700 ILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFF 759
I +L L+ I N W S + ++ L++ +F GLF+I G++ ALI +
Sbjct: 761 IEKLRRTEKLKAIENWWFQRQTTS---ATSEDTFHPLTVYTFRGLFMITGVSFAFALIVY 817
Score = 240 (89.5 bits), Expect = 2.1e-86, Sum P(2) = 2.1e-86
Identities = 63/237 (26%), Positives = 105/237 (44%)
Query: 4 EVVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQMHAV 63
+V A +G QS A ++ + + VP++S +L+ +Y YF++ T + +
Sbjct: 110 QVEALVGGQSLLEAKNLAELGEKTKVPVISSFQVPSSLSLAKYNYFIQATHDTSSEAKGI 169
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
A L + WR + I+ DDD R I L + I YKA FS ++ I L
Sbjct: 170 AALFSNFDWRTAVLIYEDDDDWRESIQPLVGHFQQNAIHIEYKAEFSVSSNEECIMKQLR 229
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
R+FV H++ +F A+ LGM Y WI T + T + + M
Sbjct: 230 KFKASGIRIFVAHISERIANRLFPCARRLGMMEEGYAWILTARSMNNFQDTNYLAKEEM- 288
Query: 184 LLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHALD 240
+GV+ + + P T+ NF RWK E + + +++A+D W +A A +
Sbjct: 289 --EGVIGFKSYIPLTEELHNFTLRWKRSLRLEEVVTRMSVCSIWAHDIAWSLARAAE 343
>TAIR|locus:2166001 [details] [associations]
symbol:ATGLR1.2 species:3702 "Arabidopsis thaliana"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0005217
"intracellular ligand-gated ion channel activity" evidence=ISS]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005576 "extracellular region" evidence=ISM]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=NAS] [GO:0009416 "response to light stimulus"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006865 "amino acid transport" evidence=RCA] [GO:0016036
"cellular response to phosphate starvation" evidence=RCA]
[GO:0019375 "galactolipid biosynthetic process" evidence=RCA]
[GO:0030003 "cellular cation homeostasis" evidence=RCA] [GO:0042631
"cellular response to water deprivation" evidence=RCA]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
Pfam:PF01094 GO:GO:0016021 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005262 GO:GO:0019722 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0071230 EMBL:AB020745
GO:GO:0005234 HOGENOM:HOG000239558 KO:K05387
ProtClustDB:CLSN2684267 GO:GO:0008066 GO:GO:0004970
InterPro:IPR017103 PIRSF:PIRSF037090 EMBL:AY072064 EMBL:AY072065
IPI:IPI00536526 IPI:IPI00547562 RefSeq:NP_199651.1
RefSeq:NP_851155.1 UniGene:At.29852 ProteinModelPortal:Q9LV72
IntAct:Q9LV72 PRIDE:Q9LV72 EnsemblPlants:AT5G48400.2 GeneID:834895
KEGG:ath:AT5G48400 TAIR:At5g48400 eggNOG:NOG313824
InParanoid:Q9LV72 OMA:FNANEDY PhylomeDB:Q9LV72
Genevestigator:Q9LV72 GermOnline:AT5G48400 Uniprot:Q9LV72
Length = 867
Score = 601 (216.6 bits), Expect = 1.6e-76, Sum P(2) = 1.6e-76
Identities = 154/508 (30%), Positives = 260/508 (51%)
Query: 258 HDTNGSMLNLSSL-RVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGT 316
HD S+ + + + R+ L+ + F GLSG + D D L++ ++++N+ G+
Sbjct: 331 HDVAWSLASAAEVTRMPTVTSTLLEAIKESRFKGLSGNFQLD-DMKLLSDKFEIVNMIGS 389
Query: 317 GSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVIWPGEITATPRGWVFPNNGMP- 375
G RR+G+W++ S + SS++ +L ++IWPG +P+G +G
Sbjct: 390 GERRVGFWNSNGSFS--------NRRQLSSTHDNLETIIWPGGSAQSPKGRSLRESGRKK 441
Query: 376 LRIAVPNRVSYNEFVAKDKSPPG-----VKGYCIDVFEAAVNLLPYPVPHNYIMYGNGKR 430
LR+ V + + + + P V+G+CI+VF+A++ Y V YI + NG
Sbjct: 442 LRVLVTSSNRFPRLMKVETDPITHEITIVEGFCIEVFQASIAPFNYEV--EYIRWLNGTN 499
Query: 431 NPIYNDIVQQV--ALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPW 488
Y + + +K+DAAVGDITI ++R+ VDFT PY E GL +VA ++ S W
Sbjct: 500 ---YTKLAYALHSQKDKYDAAVGDITITSDRSMYVDFTLPYTEMGLGIVAAKER---SMW 553
Query: 489 AFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSFSTMFFSHR 548
F +P T +W+ + FF+ G +VW++E N EF+G QQ+ + WF FST+ ++HR
Sbjct: 554 VFFQPLTPNLWITSAAFFVLTGIIVWLIERAENKEFQGSWPQQIGVVIWFGFSTLVYAHR 613
Query: 549 ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTEPIGVQD 608
E +L R +SYTA+LTS++TVQQ+ ++ + +G
Sbjct: 614 EKLQHNLSRFVVTVWVFAVLILVTSYTATLTSMMTVQQIRFN--------ANEDYVGHLS 665
Query: 609 GSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNC 668
GS N + + RL+ L E+Y+ AL V+ IV ELPY+++ + +
Sbjct: 666 GSLIANAALTNSSLRAMRLLGLNTSEDYAQALMNK----SVSYIVSELPYLKILLGENPG 721
Query: 669 EFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSP 728
F V + T +G+GF FQ+ S LA ++S I +L + L ++ +W + + +
Sbjct: 722 HFLMVKTQSTTNGFGFMFQKGSELAPNVSREIAKLRTSERLNEMERRWF---DKQLPYT- 777
Query: 729 ADGGGSRLSLKSFWGLFLICGIACFLAL 756
D + ++L F GLF+I G++ AL
Sbjct: 778 TDDTSNPITLYRFRGLFMITGVSFAFAL 805
Score = 192 (72.6 bits), Expect = 1.6e-76, Sum P(2) = 1.6e-76
Identities = 58/241 (24%), Positives = 106/241 (43%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSL-QYPYFLRTTQSDYYQMHAV 63
V A IG S A +++ + + VP++S + P SL +Y + ++ T + ++ +
Sbjct: 105 VQAIIGGNSLLEAKLLAELGEKARVPVISLNS--PMSLSLSKYTHLIQATHNSASEVKGI 162
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
+ + W V + D D R + + D + + K FS +S ++ L
Sbjct: 163 TAFLHGFDWNSVALVLEDHDDWRESMHFMVDHFHENNVHVQSKVAFSVTSSEDSLMDRLR 222
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + VFVVH++ +F A+ LGM + WI T S + +D T
Sbjct: 223 ELKDLGTTVFVVHLSEVIATRLFPCAEKLGMMGEGFAWILTSRSMSSFHD-QFIDDLTKE 281
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW-KNLKYKENSPSGFNSYAL---YAYDSVWLVAHAL 239
++GVV + + P + NF RW K L +E + S ++ +A+D W +A A
Sbjct: 282 AMEGVVGFKSYIPMSKELHNFTLRWRKTLPVEEVTGSEITRLSISGVWAHDVAWSLASAA 341
Query: 240 D 240
+
Sbjct: 342 E 342
>TAIR|locus:2166006 [details] [associations]
symbol:GLR1.3 "glutamate receptor 1.3" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009416
"response to light stimulus" evidence=NAS] [GO:0030003 "cellular
cation homeostasis" evidence=RCA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0071230 EMBL:AB020745 GO:GO:0005234
HOGENOM:HOG000239558 KO:K05387 ProtClustDB:CLSN2684267
GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103 PIRSF:PIRSF037090
EMBL:AY091121 EMBL:AY142599 IPI:IPI00522082 RefSeq:NP_199652.1
UniGene:At.66754 UniGene:At.70447 ProteinModelPortal:Q9FH75
PRIDE:Q9FH75 EnsemblPlants:AT5G48410.1 GeneID:834896
KEGG:ath:AT5G48410 TAIR:At5g48410 eggNOG:NOG270167
InParanoid:Q9FH75 OMA:FRASISP PhylomeDB:Q9FH75
Genevestigator:Q9FH75 GermOnline:AT5G48410 Uniprot:Q9FH75
Length = 860
Score = 583 (210.3 bits), Expect = 6.2e-74, Sum P(2) = 6.2e-74
Identities = 147/491 (29%), Positives = 255/491 (51%)
Query: 280 LQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILY 339
L+ + + F GLSG+ + + DK L++ ++++N+ G+ RR+G+ ++ S
Sbjct: 352 LEEITKTRFNGLSGDFQLN-DKKLLSNKFEIINMIGSSERRVGFLNSNGSFS-------- 402
Query: 340 TKPPNSSSNRHLYSVIWPGEITATPRGW-VFPNNGMPLRIAVPNRVSYNEFVAKDKSPPG 398
+ SS++ L ++IWPG +P+G + ++ LR+ V + + + + P
Sbjct: 403 NRRHLSSTHNKLETIIWPGGSAQSPKGTSLIDSDRKKLRVLVTSSNRFPRLMKVETDPVT 462
Query: 399 ----VKGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPIYNDIVQQV--ALNKFDAAVGD 452
V+G+CI+VF A+++ Y V YI + NG Y+++ + +K+DAAVGD
Sbjct: 463 NELIVEGFCIEVFRASISPFNYEV--EYIPWLNGSN---YDNLAYALHSQKDKYDAAVGD 517
Query: 453 ITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAV 512
ITI +NR+ VDFT P+ E GL +VA ++ S W F +P T +W+ + FF+ G +
Sbjct: 518 ITITSNRSTYVDFTLPFTEMGLGIVAVKER---SMWVFFQPLTPDLWITSAFFFVLTGVI 574
Query: 513 VWILEHRFNNEFRGPPSQQLVTIFWFSFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNS 572
VW++E N EF+G QQ+ + WF FST+ ++HRE +L R +
Sbjct: 575 VWLIERAENKEFQGSWPQQIGVVLWFGFSTLVYAHREKLKHNLSRFVVTVWVFAVLILTA 634
Query: 573 SYTASLTSILTVQQLTSQIEGIDSLISSTEPIGVQDGSFAWNYLVDELKIAESRLVKLKN 632
SYTA+LTS++TVQQ+ S+ + +G GS N + + R + L +
Sbjct: 635 SYTATLTSMMTVQQIRFN--------SNEDYVGHLSGSLIANVALTSSSLRAMRSLGLNS 686
Query: 633 MEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPL 692
+Y+ AL V+ +VDELPY+++ + + F V + T +G+GF FQ+ L
Sbjct: 687 AADYAQALLNKT----VSFVVDELPYLKVVLGENPTHFFMVKTQSTTNGFGFMFQKGFEL 742
Query: 693 AIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIA- 751
++S I +L + L ++ +W N+ D + ++L F GLF+I G++
Sbjct: 743 VPNVSREISKLRTSEKLNEMEKRWFD-NQLPYT---TDDTSNPITLYRFRGLFIIIGVSF 798
Query: 752 CF-LALIFFFC 761
F LA++ C
Sbjct: 799 AFALAVLVILC 809
Score = 201 (75.8 bits), Expect = 6.2e-74, Sum P(2) = 6.2e-74
Identities = 55/240 (22%), Positives = 109/240 (45%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSL-QYPYFLRTTQSDYYQMHAV 63
V A IG S A ++ + + VP++S + P SL +Y + ++ T + +
Sbjct: 107 VEAIIGGNSLLEAKLLGELGEKARVPMISLDS--PFSLSLSKYTHLIQATHDSTSEAKGI 164
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
+ + W V ++ D D R + +L + + ++ K F+ +S + L
Sbjct: 165 TSFINVFDWNSVALVYEDHDDWRESMQLLVEHFHENGVRVQSKVGFTVSSSEDFVMGRLQ 224
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + VFVVH++ +F A+ LG+ +VWI T ++ E +D T
Sbjct: 225 QLKDLGTTVFVVHLSEVIATHLFPCARRLGLMGDGFVWILT--AKTMNSFHENIDDFTKQ 282
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW-KNLKYKENSPSGFNSYALYAYDSVWLVAHALDAL 242
++GVV + + P + +NF RW K+L +E + + ++A+D + +A A + +
Sbjct: 283 AMEGVVGFKSYIPMSIELQNFTLRWRKSLPVEEAELTRLSISGIWAHDIAFALARAAEVI 342
>TAIR|locus:2102975 [details] [associations]
symbol:GLR1.1 "glutamate receptor 1.1" species:3702
"Arabidopsis thaliana" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005217 "intracellular ligand-gated ion channel
activity" evidence=ISS] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=NAS] [GO:0009737
"response to abscisic acid stimulus" evidence=IMP] [GO:0005261
"cation channel activity" evidence=IDA] [GO:0005262 "calcium
channel activity" evidence=IDA] [GO:0005267 "potassium channel
activity" evidence=IDA] [GO:0005272 "sodium channel activity"
evidence=IDA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0006814 "sodium ion transport" evidence=IDA] [GO:0006816
"calcium ion transport" evidence=IDA] [GO:0030003 "cellular cation
homeostasis" evidence=RCA;IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0006569 "tryptophan catabolic
process" evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic
process" evidence=RCA] [GO:0070838 "divalent metal ion transport"
evidence=RCA] [GO:0009416 "response to light stimulus"
evidence=IMP] InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060
Pfam:PF00497 SMART:SM00079 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0009737 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009738
GO:GO:0005262 GO:GO:0019722 GO:GO:0035235 GO:GO:0030288
GO:GO:0005267 GO:GO:0005272 InterPro:IPR001828 EMBL:AC016829
GO:GO:0071230 GO:GO:0030003 GO:GO:0005234 EMBL:AF079998
EMBL:AK117584 IPI:IPI00529222 PIR:T51138 RefSeq:NP_187061.1
UniGene:At.18800 ProteinModelPortal:Q9M8W7 STRING:Q9M8W7
TCDB:1.A.10.1.7 EnsemblPlants:AT3G04110.1 GeneID:819566
KEGG:ath:AT3G04110 GeneFarm:2528 TAIR:At3g04110 eggNOG:NOG253648
HOGENOM:HOG000239558 InParanoid:Q9M8W7 KO:K05387 OMA:IRFSENE
PhylomeDB:Q9M8W7 ProtClustDB:CLSN2684267 Genevestigator:Q9M8W7
GermOnline:AT3G04110 GO:GO:0008066 GO:GO:0004970 InterPro:IPR017103
PIRSF:PIRSF037090 Uniprot:Q9M8W7
Length = 808
Score = 370 (135.3 bits), Expect = 4.1e-50, Sum P(3) = 4.1e-50
Identities = 92/260 (35%), Positives = 128/260 (49%)
Query: 354 VIWPGEITATPRGWVFPNNGMP--LRIAVP--NRVSYNEFVAKDKSPP--GVKGYCIDVF 407
++WPG PR V G LR+ V N+V + V D V G+C++VF
Sbjct: 399 IVWPGRSRKIPRHRVLAEKGEKKVLRVLVTAGNKVPHLVSVRPDPETGVNTVSGFCVEVF 458
Query: 408 EAAVNLLPYPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQ 467
+ + P+ +I Y N Y Q+ +K+DAAVGDITI +NR+ VDFT
Sbjct: 459 KTCI--APFNYELEFIPYRGNNDNLAYLLSTQR---DKYDAAVGDITITSNRSLYVDFTL 513
Query: 468 PYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGP 527
PY + G+ ++ V+K W F PF +WL +G FF+ G VVW++E N EF+G
Sbjct: 514 PYTDIGIGILT-VKKKSQGMWTFFDPFEKSLWLASGAFFVLTGIVVWLVERSVNPEFQGS 572
Query: 528 PSQQLVTIFWFSFSTMFFSHRENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQ-- 585
QQL + WF FST+ F+HRE R SSY+A+LTS T+
Sbjct: 573 WGQQLSMMLWFGFSTIVFAHREKLQKMSSRFLVIVWVFVVLILTSSYSANLTSTKTISRM 632
Query: 586 QLTSQIEGIDSLISSTEPIG 605
QL Q+ S S T +G
Sbjct: 633 QLNHQMVFGGSTTSMTAKLG 652
Score = 167 (63.8 bits), Expect = 4.1e-50, Sum P(3) = 4.1e-50
Identities = 57/251 (22%), Positives = 121/251 (48%)
Query: 7 AAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQMHAVADL 66
A +G QS A +++ + + VP++S + TL+ +Y F++ T + + L
Sbjct: 97 AIVGAQSLQEAKLLATISEKAKVPVISTFLPN-TLSLKKYDNFIQWTHDTTSEAKGITSL 155
Query: 67 VEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGAS-RSAINSLLVGA 125
++ + + V+ I+ D D + +L + K I+ A F+ +S + + + L
Sbjct: 156 IQDFSCKSVVVIYEDADDWSESLQILVENFQDKGIYIARSASFAVSSSGENHMMNQLRKL 215
Query: 126 NLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLL 185
+ + VFVVH++ +F + LG+ ++ WI T ++ E I T ++
Sbjct: 216 KVSRASVFVVHMSEILVSRLFQCVEKLGLMEEAFAWILT---ARTMNYLEHFAI-TRSM- 270
Query: 186 QGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSY--ALYAYDSVWLVAHALDALL 243
QGV+ + + P ++ KNF SR + + +++ + +S L A+D ++A+A++
Sbjct: 271 QGVIGFKSYIPVSEEVKNFTSRLRK-RMGDDTETEHSSVIIGLRAHDIACILANAVEKF- 328
Query: 244 NEGGKFTFSND 254
+ GK S++
Sbjct: 329 SVSGKVEASSN 339
Score = 110 (43.8 bits), Expect = 4.1e-50, Sum P(3) = 4.1e-50
Identities = 37/149 (24%), Positives = 68/149 (45%)
Query: 625 SRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGF 684
++L + +E Y+ L + G + +++E+PY+ + + +F + +G+GF
Sbjct: 649 AKLGSINAVEAYAQLL----RDGTLNHVINEIPYLSILIGNYPNDFVMTDRVTNTNGFGF 704
Query: 685 AFQRDSPLAIDLSTAILQLSENGDLQKIHNKW------LTYNECSMDLSPA---DGGGSR 735
FQ+ S L +S I +L G L+ + KW L + + +++ D R
Sbjct: 705 MFQKGSDLVPKVSREIAKLRSLGMLKDMEKKWFQKLDSLNVHSNTEEVASTNDDDEASKR 764
Query: 736 LSLKSFWGLFLICGIA--CFLALIFFFCR 762
+ + GLF+I G A LAL F R
Sbjct: 765 FTFRELRGLFIIAGAAHVLVLALHLFHTR 793
Score = 101 (40.6 bits), Expect = 1.6e-20, Sum P(3) = 1.6e-20
Identities = 39/156 (25%), Positives = 66/156 (42%)
Query: 280 LQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILY 339
L T+ F GLSG+I+ +D ++ ++++NIG RRIG WS G +I++
Sbjct: 345 LDTIRHSRFKGLSGDIQI-SDNKFISETFEIVNIGREKQRRIGLWSG--GSFSQRRQIVW 401
Query: 340 TKPPNSSSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAV-PNRVSYNEFVAKDKSPPG 398
P S + V+ R V N +P ++V P+ +
Sbjct: 402 ---PGRSRKIPRHRVLAEKGEKKVLRVLVTAGNKVPHLVSVRPD---------PETGVNT 449
Query: 399 VKGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPIY 434
V G+C++VF+ + P+ +I Y N Y
Sbjct: 450 VSGFCVEVFKTCI--APFNYELEFIPYRGNNDNLAY 483
>UNIPROTKB|O43424 [details] [associations]
symbol:GRID2 "Glutamate receptor ionotropic, delta-2"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0008066 "glutamate receptor activity"
evidence=TAS] [GO:0043523 "regulation of neuron apoptotic process"
evidence=ISS] [GO:0034613 "cellular protein localization"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=ISS] [GO:0060134 "prepulse inhibition"
evidence=ISS] [GO:0030165 "PDZ domain binding" evidence=ISS]
[GO:0097110 "scaffold protein binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0034613 GO:GO:0030054 GO:GO:0045211 GO:GO:0006810
GO:GO:0043197 GO:GO:0035235 GO:GO:0045202 GO:GO:0060079
GO:GO:0060134 GO:GO:0035249 DrugBank:DB00142 GO:GO:0030288
GO:GO:0030165 GO:GO:0043523 InterPro:IPR001828 GO:GO:0097110
GO:GO:0008328 GO:GO:0005234 GO:GO:0008066 GO:GO:0004970
eggNOG:NOG276334 HOGENOM:HOG000264260 HOVERGEN:HBG051840 CTD:2895
KO:K05207 OrthoDB:EOG4SBDX4 EMBL:AF009014 EMBL:AB209318
EMBL:AC022317 EMBL:AC093596 EMBL:AC093733 EMBL:AC096769
EMBL:AC104077 EMBL:AC105315 EMBL:AC105452 EMBL:AC112695
EMBL:AC115111 EMBL:BC099652 EMBL:BC099653 IPI:IPI00747494
RefSeq:NP_001501.2 UniGene:Hs.480281 ProteinModelPortal:O43424
SMR:O43424 MINT:MINT-257823 STRING:O43424 PhosphoSite:O43424
PaxDb:O43424 PRIDE:O43424 Ensembl:ENST00000282020 GeneID:2895
KEGG:hsa:2895 UCSC:uc011cdt.2 GeneCards:GC04P093225
H-InvDB:HIX0031353 HGNC:HGNC:4576 MIM:602368 neXtProt:NX_O43424
PharmGKB:PA28971 InParanoid:O43424 OMA:CSFYTVG PhylomeDB:O43424
GenomeRNAi:2895 NextBio:11455 ArrayExpress:O43424 Bgee:O43424
CleanEx:HS_GRID2 Genevestigator:O43424 Uniprot:O43424
Length = 1007
Score = 192 (72.6 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 58/219 (26%), Positives = 97/219 (44%)
Query: 396 PPGVKGYCIDVFEAAVNLLP-----YPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAV 450
P +G+ IDV +A N L Y P + YG+ + + +N +V ++ + D +
Sbjct: 464 PKKYQGFSIDVLDALSNYLGFNYEIYVAPDH--KYGSPQEDGTWNGLVGELVFKRADIGI 521
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
+TI +R +VDFT YM+ + V+ + +A L PF + +W G L VG
Sbjct: 522 SALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVG 581
Query: 511 AVVWILE--HRFNNEFRGPPSQQLVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXX 567
+V++L + + S L WF + + E ++L R
Sbjct: 582 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFA 641
Query: 568 XXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG 605
SSYTA+L + LT+ ++ S I+ + L TE P G
Sbjct: 642 LIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYG 680
Score = 189 (71.6 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 61/209 (29%), Positives = 100/209 (47%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLV---------DELK 621
SSYTA+L + LT+ ++ S I+ + L TE P G S + ++ D +
Sbjct: 646 SSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEHVRMKGLNPFERDSMY 705
Query: 622 IAESRLVKLKNMEEYSIALARGP----KGGGVAAIVDE--LPYIELFMSKTNCEFRTVGQ 675
R++ N E ++ ++ K G A + D L Y+ + + +C F T+G
Sbjct: 706 SQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAI--NDPDCSFYTIGN 763
Query: 676 EFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYN-ECSM--DLSPADGG 732
G+G A Q SP S IL+L +NGD+ + +KW N +C + + G
Sbjct: 764 TVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCDLYSSVDTKQKG 823
Query: 733 GSRLSLKSFWGLFLI--CGI--ACFLALI 757
G+ L +KSF G+F I GI +CF+A++
Sbjct: 824 GA-LDIKSFAGVFCILAAGIVLSCFIAML 851
Score = 125 (49.1 bits), Expect = 1.6e-33, Sum P(3) = 1.6e-33
Identities = 65/292 (22%), Positives = 118/292 (40%)
Query: 58 YQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA 117
Y + +V Y W++ I IF D +Y GI D +S++ ++ +
Sbjct: 151 YLHDVILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKV--ENNINKM 207
Query: 118 INSLLVGANLMESRVF-------VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSV 170
I +L + E + ++ +NP T + + + A WI + +
Sbjct: 208 ITTLFDTMRIEELNRYRDTLRRAILVMNPATAKSFITEVVETNLVAFDCHWIIINEEIND 267
Query: 171 LDSTEPV--DIDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA 228
+D E V I + +++ + + + N K+ LY
Sbjct: 268 VDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYI 327
Query: 229 YDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRV----FDGGQQFLQTLL 284
YD+V L+A+A L D K H SM +LS +R + GG+ L+T+
Sbjct: 328 YDTVLLLANAFHKKLE---------DRKWH----SMASLSCIRKNSKPWQGGRSMLETIK 374
Query: 285 RMNFTGLSGEIRFDADKNLVNPAYDVL--NIG---GTGSRRIGYWSNYSGLS 331
+ +GL+GE+ F + N +++L N G G G R++G W+ +GL+
Sbjct: 375 KGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLN 426
Score = 41 (19.5 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 19 VISHVVNELNVPLLSFGA-TDPTL-TSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVI 76
++ +++N LN P L G+ T TL S+ + Y Q +A + W +
Sbjct: 582 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWW-LF 640
Query: 77 AIFVDDDYGRN 87
A+ V Y N
Sbjct: 641 ALIVISSYTAN 651
>UNIPROTKB|F1PEI5 [details] [associations]
symbol:GRID2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 OMA:CSFYTVG
EMBL:AAEX03016767 EMBL:AAEX03016766 Ensembl:ENSCAFT00000015920
GeneTree:ENSGT00610000087353 Uniprot:F1PEI5
Length = 922
Score = 189 (71.6 bits), Expect = 3.8e-33, Sum P(3) = 3.8e-33
Identities = 57/219 (26%), Positives = 97/219 (44%)
Query: 396 PPGVKGYCIDVFEAAVNLLP-----YPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAV 450
P +G+ IDV +A N L Y P + YG+ + + +N +V ++ + D +
Sbjct: 379 PKKYQGFSIDVLDALSNYLGFNYEIYVAPDH--KYGSPQEDGTWNGLVGELVFKRADIGI 436
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
+TI +R +VDFT YM+ + V+ + +A L PF + +W G L VG
Sbjct: 437 SALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVG 496
Query: 511 AVVWILE--HRFNNEFRGPPSQQLVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXX 567
+V++L + + S L WF + + E ++L R
Sbjct: 497 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFA 556
Query: 568 XXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG 605
SSYTA+L + LT+ ++ S I+ + L T+ P G
Sbjct: 557 LIVISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYG 595
Score = 187 (70.9 bits), Expect = 3.8e-33, Sum P(3) = 3.8e-33
Identities = 60/209 (28%), Positives = 101/209 (48%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLV---------DELK 621
SSYTA+L + LT+ ++ S I+ + L T+ P G S + ++ D +
Sbjct: 561 SSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYEHVRMKGMNPFERDSMY 620
Query: 622 IAESRLVKLKNMEEYSIALARGP----KGGGVAAIVDE--LPYIELFMSKTNCEFRTVGQ 675
R++ N E ++ ++ K G A + D L Y+ + + +C F T+G
Sbjct: 621 SQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAI--NDPDCSFYTIGN 678
Query: 676 EFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYN-ECSM--DLSPADGG 732
G+G A Q SP S IL+L +NGD+ + +KW N +C++ + G
Sbjct: 679 TVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCALYSSVDTKQKG 738
Query: 733 GSRLSLKSFWGLFLI--CGI--ACFLALI 757
G+ L +KSF G+F I GI +CF+A++
Sbjct: 739 GA-LDIKSFAGVFCILAAGIVLSCFIAML 766
Score = 125 (49.1 bits), Expect = 3.8e-33, Sum P(3) = 3.8e-33
Identities = 65/292 (22%), Positives = 118/292 (40%)
Query: 58 YQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA 117
Y + +V Y W++ I IF D +Y GI D +S++ ++ +
Sbjct: 66 YLNDVILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKV--ENNINKM 122
Query: 118 INSLLVGANLMESRVF-------VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSV 170
I +L + E + ++ +NP T + + + A WI + +
Sbjct: 123 ITTLFDTLRIEELNRYRDTLRRAILVMNPATAKSFITEVVETNLVAFDCHWIIINEEIND 182
Query: 171 LDSTEPV--DIDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA 228
+D E V I + +++ + + + N K+ LY
Sbjct: 183 VDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYI 242
Query: 229 YDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRV----FDGGQQFLQTLL 284
YD+V L+A+A L D K H SM +LS +R + GG+ L+T+
Sbjct: 243 YDTVLLLANAFHKKLE---------DRKWH----SMASLSCIRKNSKPWQGGRSMLETIK 289
Query: 285 RMNFTGLSGEIRFDADKNLVNPAYDVL--NIG---GTGSRRIGYWSNYSGLS 331
+ +GL+GE+ F + N +++L N G G G R++G W+ +GL+
Sbjct: 290 KGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLN 341
Score = 41 (19.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 19 VISHVVNELNVPLLSFGA-TDPTL-TSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVI 76
++ +++N LN P L G+ T TL S+ + Y Q +A + W +
Sbjct: 497 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWW-LF 555
Query: 77 AIFVDDDYGRN 87
A+ V Y N
Sbjct: 556 ALIVISSYTAN 566
>UNIPROTKB|F1NAD5 [details] [associations]
symbol:GRID2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0043197 "dendritic spine" evidence=IEA] [GO:0043523 "regulation
of neuron apoptotic process" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0097110
"scaffold protein binding" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0034613 GO:GO:0030054
GO:GO:0045211 GO:GO:0043197 GO:GO:0035235 GO:GO:0030288
GO:GO:0043523 InterPro:IPR001828 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:CSFYTVG
EMBL:AADN02016072 EMBL:AADN02016073 EMBL:AADN02016074
EMBL:AADN02016075 EMBL:AADN02016076 EMBL:AADN02016077
EMBL:AADN02016078 EMBL:AADN02016079 IPI:IPI00591618
Ensembl:ENSGALT00000016932 Uniprot:F1NAD5
Length = 908
Score = 187 (70.9 bits), Expect = 4.7e-33, Sum P(3) = 4.7e-33
Identities = 55/218 (25%), Positives = 97/218 (44%)
Query: 396 PPGVKGYCIDVFEAAVNLLPYPVPHNYIM----YGNGKRNPIYNDIVQQVALNKFDAAVG 451
P +G+ IDV EA N L + Y+ YG+ + + +N ++ ++ + D +
Sbjct: 365 PKKYQGFSIDVLEALANYLGFKY-EIYVAPDHKYGSPQDDGSWNGLIGELVFKRADIGIS 423
Query: 452 DITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGA 511
+TI +R +VDFT YM+ + V+ + +A L PF + +W G L VG
Sbjct: 424 ALTITPDRENVVDFTTRYMDYSVGVLLRKAEKTVDMFACLAPFDLSLWACIAGTVLLVGL 483
Query: 512 VVWILE--HRFNNEFRGPPSQQLVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXX 568
+V++L + + S L WF + + E ++L R
Sbjct: 484 LVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRLMMGAWWLFAL 543
Query: 569 XXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG 605
SSYTA+L + LT+ ++ + I+ + L T+ P G
Sbjct: 544 IVISSYTANLAAFLTITRIENSIQSLQDLSRQTDIPYG 581
Score = 182 (69.1 bits), Expect = 4.7e-33, Sum P(3) = 4.7e-33
Identities = 63/209 (30%), Positives = 100/209 (47%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAES---- 625
SSYTA+L + LT+ ++ + I+ + L T+ P G V D + + V + E
Sbjct: 547 SSYTANLAAFLTITRIENSIQSLQDLSRQTDIPYGTVLDSAVYEHVRVKGMNPFERDSMY 606
Query: 626 ----RLVKLKNMEEYSI----ALARGPKGGGVAAIVDE--LPYIELFMSKTNCEFRTVGQ 675
R++ N E ++ A + K G A + D L Y+ + + +C F TVG
Sbjct: 607 SQMWRMINRSNGSENNVLESTAGIQKVKHGNYAFVWDAAVLEYVAI--NDGDCSFYTVGN 664
Query: 676 EFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYN-ECSM--DLSPADGG 732
G+G A Q SP S IL+L +NGD+ + +KW N +C + G
Sbjct: 665 TVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCDFYSSVDTKQKG 724
Query: 733 GSRLSLKSFWGLFLI--CGI--ACFLALI 757
G+ L +KSF G+F I GI +CF+A++
Sbjct: 725 GA-LDIKSFAGVFCILAAGIVLSCFIAML 752
Score = 131 (51.2 bits), Expect = 4.7e-33, Sum P(3) = 4.7e-33
Identities = 66/292 (22%), Positives = 117/292 (40%)
Query: 58 YQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA 117
Y + ++ Y W++ I IF D+DY GI D +S++ ++ +
Sbjct: 52 YLNDVILRVITEYAWQKFI-IFYDNDYDIRGIQEFLDKVSQQGMDVALQKV--ENNINKM 108
Query: 118 INSLLVGANLMESRVF-------VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSV 170
I L + E + ++ +NP T + + + A WI + S
Sbjct: 109 ITGLFATMRIEELNRYRDTLRRAILVMNPLTAKSFLTEVVETNLVAFDCHWIIINEEISD 168
Query: 171 LDSTEPV--DIDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA 228
LD E V I + +++ + + + N K+ LY
Sbjct: 169 LDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSSLCDPKDPFSQSMEISNLYI 228
Query: 229 YDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRV----FDGGQQFLQTLL 284
YD+V L+A+A L D K H SM +L+ +R + GG+ L+T+
Sbjct: 229 YDTVLLLANAFHKKLE---------DRKWH----SMASLTCIRKNSKPWQGGRSMLETIK 275
Query: 285 RMNFTGLSGEIRFDADKNLVNPAYDVL--NIG---GTGSRRIGYWSNYSGLS 331
+ GL+GE+ F + N +++L N G G G R++G W+ +GL+
Sbjct: 276 KGGVNGLTGELEFAENGGNPNVHFEILGTNYGEDLGRGIRKLGCWNPITGLN 327
Score = 41 (19.5 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 19 VISHVVNELNVPLLSFGA-TDPTL-TSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVI 76
++ +++N LN P L G+ T TL S+ + Y Q +A + W +
Sbjct: 483 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRLMMGAWW-LF 541
Query: 77 AIFVDDDYGRN 87
A+ V Y N
Sbjct: 542 ALIVISSYTAN 552
>UNIPROTKB|E9PH24 [details] [associations]
symbol:GRID2 "Glutamate receptor ionotropic, delta-2"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC022317 EMBL:AC093596 EMBL:AC093733
EMBL:AC096769 EMBL:AC104077 EMBL:AC105315 EMBL:AC105452
EMBL:AC112695 EMBL:AC115111 HGNC:HGNC:4576 EMBL:AC020699
EMBL:AC095059 EMBL:AC108158 EMBL:AC110800 EMBL:AC115537
IPI:IPI00963845 ProteinModelPortal:E9PH24 SMR:E9PH24
Ensembl:ENST00000510992 UCSC:uc011cdu.2 ArrayExpress:E9PH24
Bgee:E9PH24 Uniprot:E9PH24
Length = 912
Score = 192 (72.6 bits), Expect = 3.0e-32, Sum P(3) = 3.0e-32
Identities = 58/219 (26%), Positives = 97/219 (44%)
Query: 396 PPGVKGYCIDVFEAAVNLLP-----YPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAV 450
P +G+ IDV +A N L Y P + YG+ + + +N +V ++ + D +
Sbjct: 369 PKKYQGFSIDVLDALSNYLGFNYEIYVAPDH--KYGSPQEDGTWNGLVGELVFKRADIGI 426
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
+TI +R +VDFT YM+ + V+ + +A L PF + +W G L VG
Sbjct: 427 SALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVG 486
Query: 511 AVVWILE--HRFNNEFRGPPSQQLVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXX 567
+V++L + + S L WF + + E ++L R
Sbjct: 487 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFA 546
Query: 568 XXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG 605
SSYTA+L + LT+ ++ S I+ + L TE P G
Sbjct: 547 LIVISSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYG 585
Score = 189 (71.6 bits), Expect = 3.0e-32, Sum P(3) = 3.0e-32
Identities = 61/209 (29%), Positives = 100/209 (47%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLV---------DELK 621
SSYTA+L + LT+ ++ S I+ + L TE P G S + ++ D +
Sbjct: 551 SSYTANLAAFLTITRIESSIQSLQDLSKQTEIPYGTVLDSAVYEHVRMKGLNPFERDSMY 610
Query: 622 IAESRLVKLKNMEEYSIALARGP----KGGGVAAIVDE--LPYIELFMSKTNCEFRTVGQ 675
R++ N E ++ ++ K G A + D L Y+ + + +C F T+G
Sbjct: 611 SQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAI--NDPDCSFYTIGN 668
Query: 676 EFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYN-ECSM--DLSPADGG 732
G+G A Q SP S IL+L +NGD+ + +KW N +C + + G
Sbjct: 669 TVADRGYGIALQHGSPYRDVFSQRILELQQNGDMDILKHKWWPKNGQCDLYSSVDTKQKG 728
Query: 733 GSRLSLKSFWGLFLI--CGI--ACFLALI 757
G+ L +KSF G+F I GI +CF+A++
Sbjct: 729 GA-LDIKSFAGVFCILAAGIVLSCFIAML 756
Score = 111 (44.1 bits), Expect = 3.0e-32, Sum P(3) = 3.0e-32
Identities = 37/115 (32%), Positives = 59/115 (51%)
Query: 226 LYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRV----FDGGQQFLQ 281
LY YD+V L+A+A L D K H SM +LS +R + GG+ L+
Sbjct: 230 LYIYDTVLLLANAFHKKLE---------DRKWH----SMASLSCIRKNSKPWQGGRSMLE 276
Query: 282 TLLRMNFTGLSGEIRFDADKNLVNPAYDVL--NIG---GTGSRRIGYWSNYSGLS 331
T+ + +GL+GE+ F + N +++L N G G G R++G W+ +GL+
Sbjct: 277 TIKKGGVSGLTGELEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLN 331
Score = 41 (19.5 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 19 VISHVVNELNVPLLSFGA-TDPTL-TSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVI 76
++ +++N LN P L G+ T TL S+ + Y Q +A + W +
Sbjct: 487 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWW-LF 545
Query: 77 AIFVDDDYGRN 87
A+ V Y N
Sbjct: 546 ALIVISSYTAN 556
>MGI|MGI:95813 [details] [associations]
symbol:Grid2 "glutamate receptor, ionotropic, delta 2"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=IDA] [GO:0010975 "regulation
of neuron projection development" evidence=IMP] [GO:0014069
"postsynaptic density" evidence=ISO] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=ISO;IPI] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IDA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IMP] [GO:0043197 "dendritic
spine" evidence=IDA] [GO:0043523 "regulation of neuron apoptotic
process" evidence=IGI;IMP] [GO:0045202 "synapse" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=ISO;IDA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IMP] [GO:0060134 "prepulse inhibition" evidence=IMP]
[GO:0097110 "scaffold protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95813
GO:GO:0014069 GO:GO:0034613 GO:GO:0030054 GO:GO:0045211
GO:GO:0043197 GO:GO:0035235 GO:GO:0060079 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043523 InterPro:IPR001828
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 CTD:2895 KO:K05207 OrthoDB:EOG4SBDX4 OMA:CSFYTVG
EMBL:D13266 EMBL:BC139823 IPI:IPI00123534 PIR:PN0156
RefSeq:NP_032193.1 UniGene:Mm.439651 UniGene:Mm.447390
ProteinModelPortal:Q61625 SMR:Q61625 IntAct:Q61625 MINT:MINT-126960
STRING:Q61625 TCDB:1.A.10.1.8 PhosphoSite:Q61625 PaxDb:Q61625
PRIDE:Q61625 Ensembl:ENSMUST00000095852 GeneID:14804 KEGG:mmu:14804
UCSC:uc009cdz.1 InParanoid:A4QPG1 BindingDB:Q61625 ChiTaRS:GRID2
NextBio:286973 Bgee:Q61625 CleanEx:MM_GRID2 Genevestigator:Q61625
GermOnline:ENSMUSG00000071424 Uniprot:Q61625
Length = 1007
Score = 189 (71.6 bits), Expect = 1.2e-31, Sum P(3) = 1.2e-31
Identities = 57/219 (26%), Positives = 97/219 (44%)
Query: 396 PPGVKGYCIDVFEAAVNLLP-----YPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAV 450
P +G+ IDV +A N L Y P + YG+ + + +N +V ++ + D +
Sbjct: 464 PKKYQGFSIDVLDALSNYLGFNYEIYVAPDH--KYGSPQEDGTWNGLVGELVFKRADIGI 521
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
+TI +R +VDFT YM+ + V+ + +A L PF + +W G L VG
Sbjct: 522 SALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVG 581
Query: 511 AVVWILE--HRFNNEFRGPPSQQLVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXX 567
+V++L + + S L WF + + E ++L R
Sbjct: 582 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFA 641
Query: 568 XXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG 605
SSYTA+L + LT+ ++ S I+ + L T+ P G
Sbjct: 642 LIVISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYG 680
Score = 173 (66.0 bits), Expect = 1.2e-31, Sum P(3) = 1.2e-31
Identities = 61/208 (29%), Positives = 98/208 (47%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAES---- 625
SSYTA+L + LT+ ++ S I+ + L T+ P G V D + + + L E
Sbjct: 646 SSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYQHVRMKGLNPFERDSMY 705
Query: 626 ----RLVKLKNMEEYSIALARGP----KGGGVAAIVDE--LPYIELFMSKTNCEFRTVGQ 675
R++ N E ++ ++ K G A + D L Y+ + + +C F TVG
Sbjct: 706 SQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAI--NDPDCSFYTVGN 763
Query: 676 EFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYN-ECSMDLS-PADGGG 733
G+G A Q SP S IL+L ++GD+ + +KW N +C + S A G
Sbjct: 764 TVADRGYGIALQHGSPYRDVFSQRILELQQSGDMDILKHKWWPKNGQCDLYSSVDAKQKG 823
Query: 734 SRLSLKSFWGLFLI--CGI--ACFLALI 757
L +KS G+F I GI +C +A++
Sbjct: 824 GALDIKSLAGVFCILAAGIVLSCLIAVL 851
Score = 126 (49.4 bits), Expect = 1.2e-31, Sum P(3) = 1.2e-31
Identities = 65/292 (22%), Positives = 117/292 (40%)
Query: 58 YQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA 117
Y + +V Y W++ I IF D +Y GI D +S++ ++ +
Sbjct: 151 YLNEVILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKV--ENNINKM 207
Query: 118 INSLLVGANLMESRVF-------VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSV 170
I +L + E + ++ +NP T + S + A WI + +
Sbjct: 208 ITTLFDTMRIEELNRYRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEIND 267
Query: 171 LDSTEPV--DIDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA 228
+D E V I + +++ + + + N K+ LY
Sbjct: 268 VDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSSLCDPKDPFAQNMEISNLYI 327
Query: 229 YDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRV----FDGGQQFLQTLL 284
YD+V L+A+A L D K H SM +LS +R + GG+ L+T+
Sbjct: 328 YDTVLLLANAFHKKLE---------DRKWH----SMASLSCIRKNSKPWQGGRSMLETIK 374
Query: 285 RMNFTGLSGEIRFDADKNLVNPAYDVL--NIG---GTGSRRIGYWSNYSGLS 331
+ GL+G++ F + N +++L N G G G R++G W+ +GL+
Sbjct: 375 KGGVNGLTGDLEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLN 426
Score = 41 (19.5 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 19 VISHVVNELNVPLLSFGA-TDPTL-TSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVI 76
++ +++N LN P L G+ T TL S+ + Y Q +A + W +
Sbjct: 582 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWW-LF 640
Query: 77 AIFVDDDYGRN 87
A+ V Y N
Sbjct: 641 ALIVISSYTAN 651
>RGD|68368 [details] [associations]
symbol:Grid2 "glutamate receptor, ionotropic, delta 2"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=IEA;ISO] [GO:0010975 "regulation of neuron projection
development" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA;ISO;IPI]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA;ISO]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA;ISO]
[GO:0043197 "dendritic spine" evidence=IEA;ISO] [GO:0043523
"regulation of neuron apoptotic process" evidence=IEA;ISO]
[GO:0045202 "synapse" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA;ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA;ISO]
[GO:0060134 "prepulse inhibition" evidence=IEA;ISO] [GO:0097110
"scaffold protein binding" evidence=IEA;ISO] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918
Pfam:PF01094 RGD:68368 GO:GO:0014069 GO:GO:0034613 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0060079 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043523 InterPro:IPR001828
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 CTD:2895 KO:K05207
OrthoDB:EOG4SBDX4 OMA:CSFYTVG EMBL:Z17239 EMBL:U08256
IPI:IPI00206854 PIR:S28858 RefSeq:NP_077355.1 RefSeq:XP_003749821.1
UniGene:Rn.10046 PDB:2V3T PDB:2V3U PDBsum:2V3T PDBsum:2V3U
ProteinModelPortal:Q63226 SMR:Q63226 DIP:DIP-40709N MINT:MINT-350054
STRING:Q63226 PhosphoSite:Q63226 Ensembl:ENSRNOT00000008304
GeneID:79220 KEGG:rno:79220 UCSC:RGD:68368 InParanoid:Q63226
EvolutionaryTrace:Q63226 NextBio:614640 ArrayExpress:Q63226
Genevestigator:Q63226 GermOnline:ENSRNOG00000006174 Uniprot:Q63226
Length = 1007
Score = 189 (71.6 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 57/219 (26%), Positives = 97/219 (44%)
Query: 396 PPGVKGYCIDVFEAAVNLLP-----YPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAV 450
P +G+ IDV +A N L Y P + YG+ + + +N +V ++ + D +
Sbjct: 464 PKKYQGFSIDVLDALSNYLGFNYEIYVAPDH--KYGSPQEDGTWNGLVGELVFKRADIGI 521
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
+TI +R +VDFT YM+ + V+ + +A L PF + +W G L VG
Sbjct: 522 SALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVG 581
Query: 511 AVVWILE--HRFNNEFRGPPSQQLVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXX 567
+V++L + + S L WF + + E ++L R
Sbjct: 582 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFA 641
Query: 568 XXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG 605
SSYTA+L + LT+ ++ S I+ + L T+ P G
Sbjct: 642 LIVISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYG 680
Score = 173 (66.0 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 61/208 (29%), Positives = 98/208 (47%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAES---- 625
SSYTA+L + LT+ ++ S I+ + L T+ P G V D + + + L E
Sbjct: 646 SSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYQHVRMKGLNPFERDSMY 705
Query: 626 ----RLVKLKNMEEYSIALARGP----KGGGVAAIVDE--LPYIELFMSKTNCEFRTVGQ 675
R++ N E ++ ++ K G A + D L Y+ + + +C F TVG
Sbjct: 706 SQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAI--NDPDCSFYTVGN 763
Query: 676 EFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYN-ECSMDLS-PADGGG 733
G+G A Q SP S IL+L ++GD+ + +KW N +C + S A G
Sbjct: 764 TVADRGYGIALQHGSPYRDVFSQRILELQQSGDMDILKHKWWPKNGQCDLYSSVDAKQKG 823
Query: 734 SRLSLKSFWGLFLI--CGI--ACFLALI 757
L +KS G+F I GI +C +A++
Sbjct: 824 GALDIKSLAGVFCILAAGIVLSCLIAVL 851
Score = 125 (49.1 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 65/292 (22%), Positives = 117/292 (40%)
Query: 58 YQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA 117
Y + +V Y W++ I IF D +Y GI D +S++ ++ +
Sbjct: 151 YLNEVILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKV--ENNINKM 207
Query: 118 INSLLVGANLMESRVF-------VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSV 170
I +L + E + ++ +NP T + S + A WI + +
Sbjct: 208 ITTLFDTMRIEELNRYRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEIND 267
Query: 171 LDSTEPV--DIDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA 228
+D E V I + +++ + + + N K+ LY
Sbjct: 268 VDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYI 327
Query: 229 YDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRV----FDGGQQFLQTLL 284
YD+V L+A+A L D K H SM +LS +R + GG+ L+T+
Sbjct: 328 YDTVLLLANAFHKKLE---------DRKWH----SMASLSCIRKNSKPWQGGRSMLETIK 374
Query: 285 RMNFTGLSGEIRFDADKNLVNPAYDVL--NIG---GTGSRRIGYWSNYSGLS 331
+ GL+G++ F + N +++L N G G G R++G W+ +GL+
Sbjct: 375 KGGVNGLTGDLEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLN 426
Score = 41 (19.5 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 19 VISHVVNELNVPLLSFGA-TDPTL-TSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVI 76
++ +++N LN P L G+ T TL S+ + Y Q +A + W +
Sbjct: 582 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWW-LF 640
Query: 77 AIFVDDDYGRN 87
A+ V Y N
Sbjct: 641 ALIVISSYTAN 651
>UNIPROTKB|Q63226 [details] [associations]
symbol:Grid2 "Glutamate receptor ionotropic, delta-2"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:68368 GO:GO:0014069
GO:GO:0034613 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0060079 GO:GO:0060134 GO:GO:0035249 GO:GO:0030288
GO:GO:0043523 InterPro:IPR001828 GO:GO:0008328 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 CTD:2895 KO:K05207 OrthoDB:EOG4SBDX4 OMA:CSFYTVG
EMBL:Z17239 EMBL:U08256 IPI:IPI00206854 PIR:S28858
RefSeq:NP_077355.1 RefSeq:XP_003749821.1 UniGene:Rn.10046 PDB:2V3T
PDB:2V3U PDBsum:2V3T PDBsum:2V3U ProteinModelPortal:Q63226
SMR:Q63226 DIP:DIP-40709N MINT:MINT-350054 STRING:Q63226
PhosphoSite:Q63226 Ensembl:ENSRNOT00000008304 GeneID:79220
KEGG:rno:79220 UCSC:RGD:68368 InParanoid:Q63226
EvolutionaryTrace:Q63226 NextBio:614640 ArrayExpress:Q63226
Genevestigator:Q63226 GermOnline:ENSRNOG00000006174 Uniprot:Q63226
Length = 1007
Score = 189 (71.6 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 57/219 (26%), Positives = 97/219 (44%)
Query: 396 PPGVKGYCIDVFEAAVNLLP-----YPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAV 450
P +G+ IDV +A N L Y P + YG+ + + +N +V ++ + D +
Sbjct: 464 PKKYQGFSIDVLDALSNYLGFNYEIYVAPDH--KYGSPQEDGTWNGLVGELVFKRADIGI 521
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
+TI +R +VDFT YM+ + V+ + +A L PF + +W G L VG
Sbjct: 522 SALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVG 581
Query: 511 AVVWILE--HRFNNEFRGPPSQQLVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXX 567
+V++L + + S L WF + + E ++L R
Sbjct: 582 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFA 641
Query: 568 XXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG 605
SSYTA+L + LT+ ++ S I+ + L T+ P G
Sbjct: 642 LIVISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYG 680
Score = 173 (66.0 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 61/208 (29%), Positives = 98/208 (47%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAES---- 625
SSYTA+L + LT+ ++ S I+ + L T+ P G V D + + + L E
Sbjct: 646 SSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYQHVRMKGLNPFERDSMY 705
Query: 626 ----RLVKLKNMEEYSIALARGP----KGGGVAAIVDE--LPYIELFMSKTNCEFRTVGQ 675
R++ N E ++ ++ K G A + D L Y+ + + +C F TVG
Sbjct: 706 SQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAI--NDPDCSFYTVGN 763
Query: 676 EFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYN-ECSMDLS-PADGGG 733
G+G A Q SP S IL+L ++GD+ + +KW N +C + S A G
Sbjct: 764 TVADRGYGIALQHGSPYRDVFSQRILELQQSGDMDILKHKWWPKNGQCDLYSSVDAKQKG 823
Query: 734 SRLSLKSFWGLFLI--CGI--ACFLALI 757
L +KS G+F I GI +C +A++
Sbjct: 824 GALDIKSLAGVFCILAAGIVLSCLIAVL 851
Score = 125 (49.1 bits), Expect = 1.5e-31, Sum P(3) = 1.5e-31
Identities = 65/292 (22%), Positives = 117/292 (40%)
Query: 58 YQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA 117
Y + +V Y W++ I IF D +Y GI D +S++ ++ +
Sbjct: 151 YLNEVILRVVTEYAWQKFI-IFYDSEYDIRGIQEFLDKVSQQGMDVALQKV--ENNINKM 207
Query: 118 INSLLVGANLMESRVF-------VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSV 170
I +L + E + ++ +NP T + S + A WI + +
Sbjct: 208 ITTLFDTMRIEELNRYRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEIND 267
Query: 171 LDSTEPV--DIDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA 228
+D E V I + +++ + + + N K+ LY
Sbjct: 268 VDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQNMEISNLYI 327
Query: 229 YDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRV----FDGGQQFLQTLL 284
YD+V L+A+A L D K H SM +LS +R + GG+ L+T+
Sbjct: 328 YDTVLLLANAFHKKLE---------DRKWH----SMASLSCIRKNSKPWQGGRSMLETIK 374
Query: 285 RMNFTGLSGEIRFDADKNLVNPAYDVL--NIG---GTGSRRIGYWSNYSGLS 331
+ GL+G++ F + N +++L N G G G R++G W+ +GL+
Sbjct: 375 KGGVNGLTGDLEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLN 426
Score = 41 (19.5 bits), Expect = 4.4e-08, Sum P(2) = 4.4e-08
Identities = 18/71 (25%), Positives = 30/71 (42%)
Query: 19 VISHVVNELNVPLLSFGA-TDPTL-TSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVI 76
++ +++N LN P L G+ T TL S+ + Y Q +A + W +
Sbjct: 582 LLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWW-LF 640
Query: 77 AIFVDDDYGRN 87
A+ V Y N
Sbjct: 641 ALIVISSYTAN 651
>ZFIN|ZDB-GENE-020125-7 [details] [associations]
symbol:gria4a "glutamate receptor, ionotropic, AMPA
4a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0030425 "dendrite" evidence=IDA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-7 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0030425 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05200 EMBL:AF525747
IPI:IPI01016706 RefSeq:NP_999971.1 UniGene:Dr.89716
ProteinModelPortal:Q71E59 SMR:Q71E59 GeneID:407735 KEGG:dre:407735
CTD:407735 NextBio:20818588 Uniprot:Q71E59
Length = 898
Score = 200 (75.5 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 76/255 (29%), Positives = 106/255 (41%)
Query: 526 GPPSQQ------LVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASL 578
GPPS Q + WFS + T SL GR SSYTA+L
Sbjct: 578 GPPSDQPPNEFGIFNSLWFSLGAFMQQGCDFTPRSLSGRIVGGVWWFFTLIIISSYTANL 637
Query: 579 TSILTVQQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEY 636
+ LTV+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 638 AAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPT 697
Query: 637 SIA------LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDS 690
+AR K G A + E E + C+ VG G+G A + S
Sbjct: 698 VFTKTTAEGVARVRKSKGKYAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGS 757
Query: 691 PLAIDLSTAILQLSENGDLQKIHNKW-LTYNECS-MDLSPADGGGSRLSLKSFWGLFLIC 748
L ++ A+L+LSE G L K+ NKW EC D D LSL + G+F I
Sbjct: 758 QLGTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKSSQALSLSNVAGVFYIL 817
Query: 749 ----GIACFLALIFF 759
G+A +AL+ F
Sbjct: 818 VGGLGLAMLVALVEF 832
Score = 154 (59.3 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 48/165 (29%), Positives = 88/165 (53%)
Query: 400 KGYCIDVF-EAAVNL-LPYPVPHNYIMYGN-GKRNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y + + ++ G G R+P I+N +V ++ K + AV +
Sbjct: 438 EGYCVDLASEVAKHIGIKYKI--SIVLDGKYGARDPETKIWNGMVGELVYGKAEIAVAPL 495
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
I R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 496 AITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 553
Query: 512 VVWILEHRFNN-EFR---------GPPSQQLVTIFWFSFSTMFFS 546
VV L RF+ E+ GPPS Q F F++++FS
Sbjct: 554 VVLFLVSRFSPYEWHTEEPEEGSDGPPSDQPPNEFGI-FNSLWFS 597
Score = 129 (50.5 bits), Expect = 2.2e-31, Sum P(3) = 2.2e-31
Identities = 71/312 (22%), Positives = 126/312 (40%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYK--APFSPGASRSAIN 119
A+ L+++Y W + ++ D D G +VL A+ +K + ++ A + ++
Sbjct: 136 ALLSLLDHYDWSRFVFLY-DTD---RGYAVL-QAIMEKAGQNGWQVSAICVENFNDASYR 190
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + + I S+G Y +I + L S E
Sbjct: 191 RLLEDLDRRQEKKFVIDLEAERLQNILEQIVSVGKHVKGYHYIVAN-LGFKDISLERFMH 249
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + P +K + RW L +E SP + S +L YD V ++
Sbjct: 250 GGANVT-GFQLVDFSKPMV-IK--LMQRWNKLDQREYPGSESPPRYTS-SL-TYDGVLVM 303
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A A L + K S D + N ++ ++ G +TL ++ GL+G I
Sbjct: 304 AEAFRNLRRQ--KIDISRRGNAGDC---LANPAA--PWNQGIDMERTLKQVRIQGLTGNI 356
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVI 355
+FD VN DV + G R+IGYW++ L +V E+ + + + I
Sbjct: 357 QFDHYGRRVNYTMDVFELKSNGPRKIGYWNDLDKLVLVQNELSMGNDSAMENRTVIVTTI 416
Query: 356 WPGEITATPRGW 367
G + W
Sbjct: 417 MEGPYVMLKKNW 428
Score = 41 (19.5 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDD 82
FL T Y + A+ + GW +V AI V++
Sbjct: 151 FLYDTDRGYAVLQAIMEKAGQNGW-QVSAICVEN 183
Score = 40 (19.1 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 427 NGKRNPIY-NDIVQQVALNKFDAAVGDITIVTNRTKLV 463
NG R Y ND+ ++ L + + ++G+ + + NRT +V
Sbjct: 377 NGPRKIGYWNDL-DKLVLVQNELSMGNDSAMENRTVIV 413
Score = 38 (18.4 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 54 QSDYYQMHAVADLVEYYGWREVIAIFVDDDYG 85
Q + Y + +++ ++ G + I+I +D YG
Sbjct: 436 QFEGYCVDLASEVAKHIGIKYKISIVLDGKYG 467
>UNIPROTKB|F1P0S5 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0004971 GO:GO:0005234 OMA:MVQQFLQ EMBL:AADN02013607
EMBL:AADN02013608 IPI:IPI00883216 Ensembl:ENSGALT00000013865
ArrayExpress:F1P0S5 Uniprot:F1P0S5
Length = 804
Score = 195 (73.7 bits), Expect = 2.5e-30, Sum P(4) = 2.5e-30
Identities = 73/248 (29%), Positives = 106/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 509 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 568
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 569 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 628
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 629 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPV 688
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+LSE G L K+ NKW EC S + S LSL + G+F I G+A
Sbjct: 689 NLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLA 748
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 749 MMVALIEF 756
Score = 148 (57.2 bits), Expect = 2.5e-30, Sum P(4) = 2.5e-30
Identities = 39/131 (29%), Positives = 73/131 (55%)
Query: 400 KGYCIDVF-EAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 362 EGYCVDLASEIAKHV---GIKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 418
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G
Sbjct: 419 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGV 476
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 477 SVVLFLVSRFS 487
Score = 122 (48.0 bits), Expect = 2.5e-30, Sum P(4) = 2.5e-30
Identities = 62/295 (21%), Positives = 122/295 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ YY W + + ++ D + G + + + +A + +++ + S G+ +
Sbjct: 58 AILSLLTYYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTAR---SVGSIKDVQEFR 113
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
++ + + + +++ D TI LG + Y ++ + L T+ V
Sbjct: 114 RIIEEMDRRQEKRYLIDCEVDRINTILEQVVILGKHSRGYHYMLAN-----LGFTDIVLE 168
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVWL 234
M+ V + + + + F+ RW L +E NSP + S AL +D+V +
Sbjct: 169 RVMHGGANVTGFQIVNNENPMVQQFLQRWVRLDEREFPEAKNSPLKYTS-AL-THDAVLV 226
Query: 235 VAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGE 294
+A A L + D + G L ++ + G + L + G++G
Sbjct: 227 IAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTGN 279
Query: 295 IRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
I+FD N DV + +GSR+ GYW+ Y V + L + +S NR
Sbjct: 280 IQFDTYGRRTNYTIDVYEMKASGSRKAGYWNEYERF-VPTLDQLPSNDTSSVENR 333
Score = 49 (22.3 bits), Expect = 2.5e-30, Sum P(4) = 2.5e-30
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N +P+ S++
Sbjct: 753 LIEFCYKSRAESKRMKLTKNTQNFKPAPSTN 783
>UNIPROTKB|G3V6Z5 [details] [associations]
symbol:Gria3 "Glutamate receptor, ionotropic, AMPA3 (Alpha
3), isoform CRA_b" species:10116 "Rattus norvegicus" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:MVQQFLQ UniGene:Rn.74049 EMBL:CH473991
ProteinModelPortal:G3V6Z5 Ensembl:ENSRNOT00000010367 Uniprot:G3V6Z5
Length = 888
Score = 195 (73.7 bits), Expect = 2.3e-29, Sum P(4) = 2.3e-29
Identities = 73/248 (29%), Positives = 106/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 653 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 712
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 713 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPV 772
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+LSE G L K+ NKW EC S + S LSL + G+F I G+A
Sbjct: 773 NLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLA 832
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 833 MMVALIEF 840
Score = 153 (58.9 bits), Expect = 2.3e-29, Sum P(4) = 2.3e-29
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 400 KGYCIDV-FEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ +E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 446 EGYCVDLAYEIAKHVR---IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 502
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G
Sbjct: 503 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGV 560
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 561 SVVLFLVSRFS 571
Score = 113 (44.8 bits), Expect = 2.3e-29, Sum P(4) = 2.3e-29
Identities = 61/296 (20%), Positives = 123/296 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ YY W + + ++ D + G + + + +A + +++ + S G +
Sbjct: 142 AILSLLGYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTAR---SVGNIKDVQEFR 197
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGM-TAGSYVWIATDWLPSVLDSTEPVD 178
++ + + + +++ + TI LG + G + +A +L E V
Sbjct: 198 RIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LERVM 255
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVW 233
N+ G + + P + + FI RW L +E N+P + S AL +D++
Sbjct: 256 HGGANIT-GFQIVNNENP---MVQQFIQRWVRLDEREFPEAKNAPLKYTS-AL-THDAIL 309
Query: 234 LVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSG 293
++A A L + D + G L ++ + G + L + G++G
Sbjct: 310 VIAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTG 362
Query: 294 EIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
I+FD N DV + +GSR+ GYW+ Y + + + + +SS NR
Sbjct: 363 NIQFDTYGRRTNYTIDVYEMKVSGSRKAGYWNEYERFVPFSDQQI-SNDSSSSENR 417
Score = 46 (21.3 bits), Expect = 2.3e-29, Sum P(4) = 2.3e-29
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N +P+ +++
Sbjct: 837 LIEFCYKSRAESKRMKLTKNTQNFKPAPATN 867
>ZFIN|ZDB-GENE-030616-53 [details] [associations]
symbol:gria3b "glutamate receptor, ionotrophic, AMPA
3b" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030616-53 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234372 HOVERGEN:HBG051839 KO:K05199 OMA:MVQQFLQ
OrthoDB:EOG4XKV68 EMBL:AL732632 EMBL:BX511226 EMBL:BX539334
EMBL:AF525746 IPI:IPI00510089 RefSeq:NP_938174.1 UniGene:Dr.14975
SMR:Q71E60 Ensembl:ENSDART00000043180 GeneID:368416 KEGG:dre:368416
CTD:368416 InParanoid:Q71E60 NextBio:20812912 Uniprot:Q71E60
Length = 883
Score = 187 (70.9 bits), Expect = 4.1e-29, Sum P(4) = 4.1e-29
Identities = 72/248 (29%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP+ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 588 PPNDFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 647
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E A
Sbjct: 648 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFAKTT 707
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 708 PDGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAV 767
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 768 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 827
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 828 MMVALIEF 835
Score = 145 (56.1 bits), Expect = 4.1e-29, Sum P(4) = 4.1e-29
Identities = 36/128 (28%), Positives = 67/128 (52%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVALNKFDAAVGDITI 455
+GYC+D+ + + +M G G R+P +N +V ++ + D AV +TI
Sbjct: 442 EGYCVDLASEIAKHVGIKYRLSIVMDGKYGARDPETKSWNGMVGELVYGRADIAVAPLTI 501
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-AVV 513
R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +VV
Sbjct: 502 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVSVV 559
Query: 514 WILEHRFN 521
L RF+
Sbjct: 560 LFLVSRFS 567
Score = 125 (49.1 bits), Expect = 4.1e-29, Sum P(4) = 4.1e-29
Identities = 60/293 (20%), Positives = 122/293 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSL 121
AV L+ +Y W + + ++ D D G + + + +A +++ ++ S +
Sbjct: 138 AVLSLLSHYKWDKFVYLY-DTDRGFSILQAIMEAAVANNWQVTARSVGSI-TDPQEFRRI 195
Query: 122 LVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ + + + +++ D I +LG + Y +I + L S + V +
Sbjct: 196 IEEMDRRQEKRYLIDCEVDRINVILEQVVTLGKNSRGYHYIIAN-LGFTNISLDKVFLGG 254
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVWLVA 236
N+ G + P+ + + F+ RW L +E N+P + S AL +YD++ ++A
Sbjct: 255 ANI-SGFQIIN---PENLVVQQFLQRWDRLDEREFPEAKNTPLKYTS-AL-SYDAILVIA 308
Query: 237 HALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIR 296
A L + D + G L ++ + G + L + G++G I+
Sbjct: 309 EAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTGNIQ 361
Query: 297 FDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
FD+ N DV + G R+IGYW+ + + + +T +S NR
Sbjct: 362 FDSFGRRTNYTIDVYEMKTGGPRKIGYWNEFERFVNIMDQ-QFTNDSSSVENR 413
Score = 48 (22.0 bits), Expect = 4.1e-29, Sum P(4) = 4.1e-29
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPS 829
LI+F + AE K + +N+ N +P+
Sbjct: 832 LIEFCYKSRAEAKRLKLEKNAQNYKPA 858
>MGI|MGI:95810 [details] [associations]
symbol:Gria3 "glutamate receptor, ionotropic, AMPA3 (alpha 3)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=ISO]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030425
"dendrite" evidence=ISO] [GO:0032279 "asymmetric synapse"
evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043083
"synaptic cleft" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043198 "dendritic shaft" evidence=ISO] [GO:0043204
"perikaryon" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95810 GO:GO:0014069 GO:GO:0060992 GO:GO:0010226
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0032279 GO:GO:0043195 GO:GO:0032281 GO:GO:0043083
GO:GO:0001919 InterPro:IPR001828 EMBL:CH466570 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
HOGENOM:HOG000234372 HOVERGEN:HBG051839 CTD:2892 KO:K05199
OrthoDB:EOG4XKV68 EMBL:AB022342 EMBL:AB079072 EMBL:AF483494
EMBL:AF483495 EMBL:AK220530 EMBL:AL672290 EMBL:AL672232
EMBL:BC129855 IPI:IPI00131472 RefSeq:NP_058582.3 UniGene:Mm.327681
PDB:3LSW PDB:3LSX PDBsum:3LSW PDBsum:3LSX ProteinModelPortal:Q9Z2W9
SMR:Q9Z2W9 IntAct:Q9Z2W9 STRING:Q9Z2W9 PhosphoSite:Q9Z2W9
PaxDb:Q9Z2W9 PRIDE:Q9Z2W9 Ensembl:ENSMUST00000076349 GeneID:53623
KEGG:mmu:53623 UCSC:uc009tam.2 BindingDB:Q9Z2W9 ChEMBL:CHEMBL3624
EvolutionaryTrace:Q9Z2W9 NextBio:310361 Bgee:Q9Z2W9
CleanEx:MM_GRIA3 Genevestigator:Q9Z2W9
GermOnline:ENSMUSG00000001986 Uniprot:Q9Z2W9
Length = 888
Score = 195 (73.7 bits), Expect = 4.6e-29, Sum P(4) = 4.6e-29
Identities = 73/248 (29%), Positives = 106/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 653 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 712
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 713 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPV 772
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+LSE G L K+ NKW EC S + S LSL + G+F I G+A
Sbjct: 773 NLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLA 832
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 833 MMVALIEF 840
Score = 153 (58.9 bits), Expect = 4.6e-29, Sum P(4) = 4.6e-29
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 400 KGYCIDV-FEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ +E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 446 EGYCVDLAYEIAKHVR---IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 502
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G
Sbjct: 503 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGV 560
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 561 SVVLFLVSRFS 571
Score = 110 (43.8 bits), Expect = 4.6e-29, Sum P(4) = 4.6e-29
Identities = 58/295 (19%), Positives = 122/295 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ YY W + + ++ D + G + + + +A + +++ + S G +
Sbjct: 142 AILSLLGYYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTAR---SVGNIKDIQEFR 197
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
++ + + + +++ + TI LG + Y ++ + L T+ V
Sbjct: 198 RIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLAN-----LGFTDIVLE 252
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVWL 234
M+ + + + + + FI RW L +E N+P + S AL +D++ +
Sbjct: 253 RVMHGGANITGFQIVNNENPMVQQFIQRWVRLDEREFPEAKNAPLKYTS-AL-THDAILV 310
Query: 235 VAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGE 294
+A A L + D + G L ++ + G + L + G++G
Sbjct: 311 IAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTGN 363
Query: 295 IRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
I+FD N DV + +GSR+ GYW+ Y + + + + +SS NR
Sbjct: 364 IQFDTYGRRTNYTIDVYEMKVSGSRKAGYWNEYERFVPFSDQQI-SNDSSSSENR 417
Score = 46 (21.3 bits), Expect = 4.6e-29, Sum P(4) = 4.6e-29
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N +P+ +++
Sbjct: 837 LIEFCYKSRAESKRMKLTKNTQNFKPAPATN 867
>UNIPROTKB|A2AVK2 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:AL929554 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882 Pfam:PF10562
HOVERGEN:HBG052638 UniGene:Hs.558334 HGNC:HGNC:4584 ChiTaRS:GRIN1
IPI:IPI00789973 SMR:A2AVK2 Ensembl:ENST00000350902 UCSC:uc004cli.1
Uniprot:A2AVK2
Length = 909
Score = 238 (88.8 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
Identities = 82/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 491 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 550
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 551 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 610
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 611 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 670
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 671 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 729
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++ +
Sbjct: 730 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDL 788
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 789 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 832
Score = 152 (58.6 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAP 108
FLRT +Q +++ Y W +I + DD GR L L ++ +K
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQ 196
Query: 109 FSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
F PG + +LL+ A +E+RV ++ + D T++ A L MT YVW+
Sbjct: 197 FDPGTKN--VTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 248
Score = 61 (26.5 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 273 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 320
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 321 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 373
Score = 49 (22.3 bits), Expect = 6.0e-29, Sum P(4) = 6.0e-29
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 379 IIWPGGETEKPRGY 392
>UNIPROTKB|Q05586 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IDA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IDA] [GO:0016594 "glycine binding"
evidence=IMP;IDA] [GO:0016595 "glutamate binding" evidence=IDA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0030425
"dendrite" evidence=IDA] [GO:0045471 "response to ethanol"
evidence=IDA] [GO:0006812 "cation transport" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042391 "regulation
of membrane potential" evidence=IDA] [GO:0005262 "calcium channel
activity" evidence=IDA] [GO:0005509 "calcium ion binding"
evidence=ISS] [GO:0005516 "calmodulin binding" evidence=ISS]
[GO:0008021 "synaptic vesicle" evidence=ISS] [GO:0008542 "visual
learning" evidence=ISS] [GO:0014069 "postsynaptic density"
evidence=ISS] [GO:0043005 "neuron projection" evidence=ISS]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISS] [GO:0045202 "synapse" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0055074 "calcium ion homeostasis" evidence=ISS]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0009986 "cell surface" evidence=ISS] [GO:0018964 "propylene
metabolic process" evidence=ISS] [GO:2000463 "positive regulation
of excitatory postsynaptic membrane potential" evidence=ISS]
[GO:0043083 "synaptic cleft" evidence=ISS] [GO:0042165
"neurotransmitter binding" evidence=ISS] [GO:0043195 "terminal
bouton" evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0060076 "excitatory synapse" evidence=ISS] [GO:0070588 "calcium
ion transmembrane transport" evidence=IDA] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0045471 GO:GO:0030054 GO:GO:0045211
GO:GO:0008021 GO:GO:0045944 GO:GO:0035235 GO:GO:0008542
GO:GO:0005509 GO:GO:0043195 DrugBank:DB00142 GO:GO:0030288
GO:GO:0005516 GO:GO:0043083 EMBL:AL929554 InterPro:IPR001828
GO:GO:0070588 GO:GO:0055074 GO:GO:0060076 Orphanet:178469 PDB:3BYA
PDBsum:3BYA DrugBank:DB01173 GO:GO:0016595 GO:GO:2000463
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 GO:GO:0004970
eggNOG:NOG282132 GO:GO:0016594 KO:K05208 InterPro:IPR018882
Pfam:PF10562 TCDB:1.A.10.1.6 CTD:2902 HOVERGEN:HBG052638
OrthoDB:EOG4CG07J EMBL:L13266 EMBL:L13267 EMBL:L13268 EMBL:D13515
EMBL:L05666 EMBL:AF015730 EMBL:AF015731 EMBL:Z32772 EMBL:Z32773
EMBL:Z32774 EMBL:U08106 EMBL:U08107 EMBL:S57708 IPI:IPI00011989
IPI:IPI00013915 IPI:IPI00335571 IPI:IPI00465228 IPI:IPI00470730
IPI:IPI00470731 IPI:IPI00646891 PIR:A46612 PIR:A47551
RefSeq:NP_000823.4 RefSeq:NP_001172019.1 RefSeq:NP_001172020.1
RefSeq:NP_015566.1 RefSeq:NP_067544.1 UniGene:Hs.558334 PDB:2NR1
PDBsum:2NR1 ProteinModelPortal:Q05586 SMR:Q05586 IntAct:Q05586
MINT:MINT-1900224 STRING:Q05586 PhosphoSite:Q05586 DMDM:548377
PaxDb:Q05586 PRIDE:Q05586 Ensembl:ENST00000315048
Ensembl:ENST00000371546 Ensembl:ENST00000371550
Ensembl:ENST00000371553 Ensembl:ENST00000371559
Ensembl:ENST00000371560 Ensembl:ENST00000371561 GeneID:2902
KEGG:hsa:2902 UCSC:uc004clk.3 UCSC:uc004cll.3 UCSC:uc004clm.3
GeneCards:GC09P140032 HGNC:HGNC:4584 HPA:CAB006831 MIM:138249
MIM:614254 neXtProt:NX_Q05586 PharmGKB:PA28978 OMA:VYRSAAM
PhylomeDB:Q05586 BindingDB:Q05586 ChEMBL:CHEMBL2015 ChiTaRS:GRIN1
EvolutionaryTrace:Q05586 GenomeRNAi:2902 NextBio:11487
PMAP-CutDB:Q5VSF3 ArrayExpress:Q05586 Bgee:Q05586 CleanEx:HS_GRIN1
Genevestigator:Q05586 GermOnline:ENSG00000176884 GO:GO:0018964
Uniprot:Q05586
Length = 938
Score = 238 (88.8 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 82/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 491 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 550
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 551 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 610
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 611 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 670
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 671 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 729
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++ +
Sbjct: 730 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDL 788
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 789 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 832
Score = 152 (58.6 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAP 108
FLRT +Q +++ Y W +I + DD GR L L ++ +K
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQ 196
Query: 109 FSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
F PG + +LL+ A +E+RV ++ + D T++ A L MT YVW+
Sbjct: 197 FDPGTKN--VTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 248
Score = 61 (26.5 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 273 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 320
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 321 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 373
Score = 49 (22.3 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 379 IIWPGGETEKPRGY 392
>RGD|2736 [details] [associations]
symbol:Grin1 "glutamate receptor, ionotropic, N-methyl D-aspartate
1" species:10116 "Rattus norvegicus" [GO:0001661 "conditioned taste
aversion" evidence=IEA;ISO] [GO:0001964 "startle response"
evidence=ISO] [GO:0001967 "suckling behavior" evidence=IEA;ISO]
[GO:0001975 "response to amphetamine" evidence=IEA;ISO] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IDA;TAS]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP;IDA;TAS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISO] [GO:0005262 "calcium channel activity"
evidence=IEA;ISO] [GO:0005509 "calcium ion binding" evidence=IEA;ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005887 "integral to plasma membrane" evidence=ISO] [GO:0006812
"cation transport" evidence=ISO] [GO:0006816 "calcium ion transport"
evidence=ISO] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA;ISO] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA;ISO] [GO:0007611 "learning or memory" evidence=ISO;TAS]
[GO:0007612 "learning" evidence=ISO] [GO:0007613 "memory"
evidence=ISO] [GO:0007616 "long-term memory" evidence=IEA;ISO]
[GO:0008021 "synaptic vesicle" evidence=IEA;ISO] [GO:0008306
"associative learning" evidence=ISO] [GO:0008344 "adult locomotory
behavior" evidence=IEA;ISO] [GO:0008355 "olfactory learning"
evidence=IEA;ISO] [GO:0008542 "visual learning" evidence=IEA;ISO]
[GO:0009986 "cell surface" evidence=IEA;ISO] [GO:0010646 "regulation
of cell communication" evidence=ISO] [GO:0010942 "positive regulation
of cell death" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0014070 "response to organic cyclic compound"
evidence=IEP] [GO:0014075 "response to amine stimulus" evidence=IEP]
[GO:0016020 "membrane" evidence=ISO] [GO:0016594 "glycine binding"
evidence=ISO;IDA] [GO:0016595 "glutamate binding" evidence=ISO;IDA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISO;IDA;TAS] [GO:0018964 "propylene metabolic
process" evidence=IEA;ISO] [GO:0019233 "sensory perception of pain"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0021586 "pons maturation" evidence=IEA;ISO] [GO:0021987 "cerebral
cortex development" evidence=IEA;ISO] [GO:0022843 "voltage-gated
cation channel activity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO] [GO:0032590
"dendrite membrane" evidence=IDA] [GO:0034220 "ion transmembrane
transport" evidence=ISO] [GO:0035176 "social behavior"
evidence=IEA;ISO] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IDA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA;ISO] [GO:0035254 "glutamate
receptor binding" evidence=IPI] [GO:0042165 "neurotransmitter
binding" evidence=IDA] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=IEA;ISO] [GO:0043083 "synaptic cleft" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=ISO;IDA] [GO:0043278 "response to morphine"
evidence=IEA;ISO] [GO:0043523 "regulation of neuron apoptotic
process" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA;ISO] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IEA;ISO] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0045471 "response to ethanol" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IDA] [GO:0048167 "regulation of
synaptic plasticity" evidence=ISO] [GO:0048168 "regulation of
neuronal synaptic plasticity" evidence=ISO] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=IEA;ISO]
[GO:0048511 "rhythmic process" evidence=IDA] [GO:0048814 "regulation
of dendrite morphogenesis" evidence=IEA;ISO] [GO:0050770 "regulation
of axonogenesis" evidence=IEA;ISO] [GO:0050905 "neuromuscular
process" evidence=ISO] [GO:0051262 "protein tetramerization"
evidence=IDA] [GO:0051592 "response to calcium ion" evidence=IEP]
[GO:0051963 "regulation of synapse assembly" evidence=IEA;ISO]
[GO:0055074 "calcium ion homeostasis" evidence=ISO] [GO:0060076
"excitatory synapse" evidence=IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060134
"prepulse inhibition" evidence=IEA;ISO] [GO:0060179 "male mating
behavior" evidence=IEA;ISO] [GO:0060992 "response to fungicide"
evidence=IEP] [GO:0070588 "calcium ion transmembrane transport"
evidence=ISO] [GO:0071287 "cellular response to manganese ion"
evidence=IEP] [GO:2000463 "positive regulation of excitatory
postsynaptic membrane potential" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060
Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2736 GO:GO:0014069 GO:GO:0051592 GO:GO:0060992 GO:GO:0030054
GO:GO:0045211 GO:GO:0043195 GO:GO:0048511 GO:GO:0030288 GO:GO:0007611
GO:GO:0014070 GO:GO:0043083 GO:GO:0010942 GO:GO:0032590
InterPro:IPR001828 GO:GO:0014075 GO:GO:0060076 GO:GO:0016595
GO:GO:2000463 GO:GO:0071287 GO:GO:0017146 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GeneTree:ENSGT00700000104113
GO:GO:0022843 GO:GO:0004972 KO:K05208 InterPro:IPR018882 Pfam:PF10562
PDB:2A5T PDBsum:2A5T CTD:2902 HOGENOM:HOG000231491 HOVERGEN:HBG052638
OMA:VYRSAAM EMBL:X63255 EMBL:AY157515 EMBL:U08261 EMBL:U08262
EMBL:U08263 EMBL:U08264 EMBL:U08265 EMBL:U08267 EMBL:U08268
EMBL:S39217 EMBL:S39218 EMBL:S39219 EMBL:S39220 EMBL:S39221
EMBL:X65227 IPI:IPI00198625 IPI:IPI00231254 IPI:IPI00231255
IPI:IPI00231256 IPI:IPI00231257 IPI:IPI00231259 IPI:IPI00389747
PIR:JN0336 PIR:JN0337 PIR:JN0338 PIR:JN0339 PIR:JN0340 PIR:JN0341
PIR:JN0342 PIR:S19710 RefSeq:NP_001257531.1 RefSeq:NP_001257532.1
RefSeq:NP_001257534.1 RefSeq:NP_001257537.1 RefSeq:NP_001257539.1
RefSeq:NP_058706.1 UniGene:Rn.9840 PDB:1PB7 PDB:1PB8 PDB:1PB9
PDB:1PBQ PDB:1Y1M PDB:1Y1Z PDB:1Y20 PDB:3Q41 PDBsum:1PB7 PDBsum:1PB8
PDBsum:1PB9 PDBsum:1PBQ PDBsum:1Y1M PDBsum:1Y1Z PDBsum:1Y20
PDBsum:3Q41 ProteinModelPortal:P35439 SMR:P35439 DIP:DIP-674N
IntAct:P35439 MINT:MINT-101336 STRING:P35439 PhosphoSite:P35439
PRIDE:P35439 Ensembl:ENSRNOT00000037725 Ensembl:ENSRNOT00000044246
Ensembl:ENSRNOT00000049297 GeneID:24408 KEGG:rno:24408 UCSC:RGD:2736
BindingDB:P35439 ChEMBL:CHEMBL330 EvolutionaryTrace:P35439
NextBio:603223 ArrayExpress:P35439 Genevestigator:P35439
GermOnline:ENSRNOG00000011726 Uniprot:P35439
Length = 938
Score = 238 (88.8 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 82/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 491 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 550
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 551 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 610
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 611 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 670
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 671 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 729
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++ +
Sbjct: 730 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDL 788
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 789 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 832
Score = 152 (58.6 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAP 108
FLRT +Q +++ Y W +I + DD GR L L ++ +K
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQ 196
Query: 109 FSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
F PG + +LL+ A +E+RV ++ + D T++ A L MT YVW+
Sbjct: 197 FDPGTKN--VTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 248
Score = 61 (26.5 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 273 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 320
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 321 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 373
Score = 49 (22.3 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 379 IIWPGGETEKPRGY 392
>UNIPROTKB|P35439 [details] [associations]
symbol:Grin1 "Glutamate receptor ionotropic, NMDA 1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2736
GO:GO:0014069 GO:GO:0051592 GO:GO:0060992 GO:GO:0030054
GO:GO:0045211 GO:GO:0043195 GO:GO:0048511 GO:GO:0030288
GO:GO:0007611 GO:GO:0014070 GO:GO:0043083 GO:GO:0010942
GO:GO:0032590 InterPro:IPR001828 GO:GO:0014075 GO:GO:0060076
GO:GO:0016595 GO:GO:2000463 GO:GO:0071287 GO:GO:0017146
GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0022843 GO:GO:0004972 KO:K05208
InterPro:IPR018882 Pfam:PF10562 PDB:2A5T PDBsum:2A5T CTD:2902
HOGENOM:HOG000231491 HOVERGEN:HBG052638 OMA:VYRSAAM EMBL:X63255
EMBL:AY157515 EMBL:U08261 EMBL:U08262 EMBL:U08263 EMBL:U08264
EMBL:U08265 EMBL:U08267 EMBL:U08268 EMBL:S39217 EMBL:S39218
EMBL:S39219 EMBL:S39220 EMBL:S39221 EMBL:X65227 IPI:IPI00198625
IPI:IPI00231254 IPI:IPI00231255 IPI:IPI00231256 IPI:IPI00231257
IPI:IPI00231259 IPI:IPI00389747 PIR:JN0336 PIR:JN0337 PIR:JN0338
PIR:JN0339 PIR:JN0340 PIR:JN0341 PIR:JN0342 PIR:S19710
RefSeq:NP_001257531.1 RefSeq:NP_001257532.1 RefSeq:NP_001257534.1
RefSeq:NP_001257537.1 RefSeq:NP_001257539.1 RefSeq:NP_058706.1
UniGene:Rn.9840 PDB:1PB7 PDB:1PB8 PDB:1PB9 PDB:1PBQ PDB:1Y1M
PDB:1Y1Z PDB:1Y20 PDB:3Q41 PDBsum:1PB7 PDBsum:1PB8 PDBsum:1PB9
PDBsum:1PBQ PDBsum:1Y1M PDBsum:1Y1Z PDBsum:1Y20 PDBsum:3Q41
ProteinModelPortal:P35439 SMR:P35439 DIP:DIP-674N IntAct:P35439
MINT:MINT-101336 STRING:P35439 PhosphoSite:P35439 PRIDE:P35439
Ensembl:ENSRNOT00000037725 Ensembl:ENSRNOT00000044246
Ensembl:ENSRNOT00000049297 GeneID:24408 KEGG:rno:24408
UCSC:RGD:2736 BindingDB:P35439 ChEMBL:CHEMBL330
EvolutionaryTrace:P35439 NextBio:603223 ArrayExpress:P35439
Genevestigator:P35439 GermOnline:ENSRNOG00000011726 Uniprot:P35439
Length = 938
Score = 238 (88.8 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 82/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 491 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 550
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 551 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 610
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 611 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 670
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 671 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 729
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++ +
Sbjct: 730 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDL 788
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 789 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 832
Score = 152 (58.6 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAP 108
FLRT +Q +++ Y W +I + DD GR L L ++ +K
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQ 196
Query: 109 FSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
F PG + +LL+ A +E+RV ++ + D T++ A L MT YVW+
Sbjct: 197 FDPGTKN--VTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 248
Score = 61 (26.5 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 273 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 320
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 321 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 373
Score = 49 (22.3 bits), Expect = 7.2e-29, Sum P(4) = 7.2e-29
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 379 IIWPGGETEKPRGY 392
>UNIPROTKB|F1RU73 [details] [associations]
symbol:LOC100519996 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
OMA:MVQQFLQ EMBL:CU210872 EMBL:CU469331 EMBL:CU856192
Ensembl:ENSSSCT00000013819 Uniprot:F1RU73
Length = 854
Score = 195 (73.7 bits), Expect = 7.5e-29, Sum P(4) = 7.5e-29
Identities = 73/248 (29%), Positives = 106/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 559 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 618
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 619 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 678
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 679 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPV 738
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+LSE G L K+ NKW EC S + S LSL + G+F I G+A
Sbjct: 739 NLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLA 798
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 799 MMVALIEF 806
Score = 153 (58.9 bits), Expect = 7.5e-29, Sum P(4) = 7.5e-29
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 400 KGYCIDV-FEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ +E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 412 EGYCVDLAYEIAKHVR---IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 468
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G
Sbjct: 469 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGV 526
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 527 SVVLFLVSRFS 537
Score = 107 (42.7 bits), Expect = 7.5e-29, Sum P(4) = 7.5e-29
Identities = 57/274 (20%), Positives = 114/274 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ +Y W + + ++ D + G + + + +A + +++ + S G +
Sbjct: 108 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTAR---SVGNIKDVQEFR 163
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGM-TAGSYVWIATDWLPSVLDSTEPVD 178
++ + + + +++ + TI LG + G + +A +L E V
Sbjct: 164 RIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LERVM 221
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVW 233
N+ G + + P + + FI RW L +E N+P + S AL +D++
Sbjct: 222 HGGANIT-GFQIVNNENP---MVQQFIQRWVRLDEREFPEAKNAPLKYTS-AL-THDAIL 275
Query: 234 LVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSG 293
++A A L + D + G L ++ + G + L + G++G
Sbjct: 276 VIAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTG 328
Query: 294 EIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNY 327
I+FD N DV + TGSR+ GYW+ Y
Sbjct: 329 NIQFDTYGRRTNYTIDVYEMKVTGSRKAGYWNEY 362
Score = 46 (21.3 bits), Expect = 7.5e-29, Sum P(4) = 7.5e-29
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N +P+ +++
Sbjct: 803 LIEFCYKSRAESKRMKLTKNTQNFKPAPATN 833
>UNIPROTKB|E2RHU1 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234 CTD:2892
KO:K05199 OMA:MVQQFLQ EMBL:AAEX03026851 EMBL:AAEX03026852
RefSeq:XP_852016.1 ProteinModelPortal:E2RHU1
Ensembl:ENSCAFT00000029477 GeneID:492110 KEGG:cfa:492110
NextBio:20864762 Uniprot:E2RHU1
Length = 894
Score = 195 (73.7 bits), Expect = 7.7e-29, Sum P(4) = 7.7e-29
Identities = 73/248 (29%), Positives = 106/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 599 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 658
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 659 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 718
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 719 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPV 778
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+LSE G L K+ NKW EC S + S LSL + G+F I G+A
Sbjct: 779 NLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLA 838
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 839 MMVALIEF 846
Score = 153 (58.9 bits), Expect = 7.7e-29, Sum P(4) = 7.7e-29
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 400 KGYCIDV-FEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ +E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 452 EGYCVDLAYEIAKHVR---IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 508
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G
Sbjct: 509 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGV 566
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 567 SVVLFLVSRFS 577
Score = 108 (43.1 bits), Expect = 7.7e-29, Sum P(4) = 7.7e-29
Identities = 61/296 (20%), Positives = 122/296 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ +Y W + + ++ D + G + + + +A + +++ + S G +
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTAR---SVGNIKDVQEFR 203
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGM-TAGSYVWIATDWLPSVLDSTEPVD 178
++ + + + +++ + TI LG + G + +A +L E V
Sbjct: 204 RIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LERVM 261
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVW 233
N+ G + + P + + FI RW L +E N+P + S AL +D++
Sbjct: 262 HGGANIT-GFQIVNNENP---MVQQFIQRWVRLDEREFPEAKNAPLKYTS-AL-THDAIL 315
Query: 234 LVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSG 293
++A A L + D + G L ++ + G + L + G++G
Sbjct: 316 VIAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTG 368
Query: 294 EIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
I+FD N DV + TGSR+ GYW+ Y + + + + SS NR
Sbjct: 369 NIQFDTYGRRTNYTIDVYEMKVTGSRKAGYWNEYERFVPFSDQQI-SNDSASSENR 423
Score = 46 (21.3 bits), Expect = 7.7e-29, Sum P(4) = 7.7e-29
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N +P+ +++
Sbjct: 843 LIEFCYKSRAESKRMKLTKNTQNFKPAPATN 873
>MGI|MGI:95819 [details] [associations]
symbol:Grin1 "glutamate receptor, ionotropic, NMDA1 (zeta 1)"
species:10090 "Mus musculus" [GO:0001661 "conditioned taste
aversion" evidence=IMP] [GO:0001964 "startle response"
evidence=IMP] [GO:0001967 "suckling behavior" evidence=IMP]
[GO:0001975 "response to amphetamine" evidence=IGI;IMP] [GO:0004872
"receptor activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISO] [GO:0004972 "N-methyl-D-aspartate
selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA]
[GO:0005102 "receptor binding" evidence=IPI] [GO:0005215
"transporter activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=IGI] [GO:0005262 "calcium channel activity"
evidence=IGI;IDA] [GO:0005509 "calcium ion binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005516 "calmodulin
binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006812
"cation transport" evidence=ISO;IGI] [GO:0006816 "calcium ion
transport" evidence=IMP;IDA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IMP] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0007585 "respiratory gaseous exchange"
evidence=IMP] [GO:0007611 "learning or memory" evidence=IMP]
[GO:0007612 "learning" evidence=IMP] [GO:0007613 "memory"
evidence=IMP] [GO:0007616 "long-term memory" evidence=IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008306
"associative learning" evidence=IMP] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0008355 "olfactory learning"
evidence=IMP] [GO:0008542 "visual learning" evidence=IGI;IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010646 "regulation of
cell communication" evidence=IMP] [GO:0010942 "positive regulation
of cell death" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=IC;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016594
"glycine binding" evidence=ISO;IMP] [GO:0016595 "glutamate binding"
evidence=ISO] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=ISO;IPI] [GO:0018964 "propylene
metabolic process" evidence=IDA] [GO:0019233 "sensory perception of
pain" evidence=IMP] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0021586 "pons maturation" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0022843 "voltage-gated cation
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO]
[GO:0030426 "growth cone" evidence=NAS] [GO:0032590 "dendrite
membrane" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IDA] [GO:0035176 "social behavior" evidence=IMP]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IGI;IDA;IMP] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0035254 "glutamate receptor
binding" evidence=ISO] [GO:0042165 "neurotransmitter binding"
evidence=ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO;IMP;IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IGI] [GO:0043083 "synaptic cleft" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0043197 "dendritic
spine" evidence=ISO;IDA] [GO:0043278 "response to morphine"
evidence=IMP] [GO:0043523 "regulation of neuron apoptotic process"
evidence=IGI;IMP] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IGI;IMP] [GO:0043576 "regulation of
respiratory gaseous exchange" evidence=IMP] [GO:0045202 "synapse"
evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0046983 "protein dimerization activity"
evidence=ISO] [GO:0048167 "regulation of synaptic plasticity"
evidence=IMP] [GO:0048168 "regulation of neuronal synaptic
plasticity" evidence=IMP] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048511 "rhythmic
process" evidence=ISO] [GO:0048814 "regulation of dendrite
morphogenesis" evidence=IMP] [GO:0050770 "regulation of
axonogenesis" evidence=IMP] [GO:0050905 "neuromuscular process"
evidence=IMP] [GO:0051262 "protein tetramerization" evidence=ISO]
[GO:0051963 "regulation of synapse assembly" evidence=IMP]
[GO:0055074 "calcium ion homeostasis" evidence=IDA] [GO:0060076
"excitatory synapse" evidence=ISO] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IGI;IMP]
[GO:0060134 "prepulse inhibition" evidence=IMP] [GO:0060179 "male
mating behavior" evidence=IMP] [GO:0070588 "calcium ion
transmembrane transport" evidence=ISO;IGI;IDA] [GO:2000463
"positive regulation of excitatory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
MGI:MGI:95819 GO:GO:0021987 GO:GO:0008355 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0019233 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0008021 GO:GO:0045944
GO:GO:0008344 GO:GO:0001967 GO:GO:0008542 GO:GO:0007616
GO:GO:0005509 GO:GO:0060079 GO:GO:0001975 GO:GO:0043524
GO:GO:0060134 GO:GO:0035249 GO:GO:0030288 GO:GO:0030426
GO:GO:0043065 GO:GO:0005516 GO:GO:0050770 GO:GO:0048814
GO:GO:0007585 GO:GO:0006874 GO:GO:0001661 GO:GO:0051963
GO:GO:0035176 EMBL:AL732309 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GeneTree:ENSGT00700000104113 GO:GO:0060179
GO:GO:0004972 KO:K05208 InterPro:IPR018882 Pfam:PF10562 CTD:2902
HOGENOM:HOG000231491 HOVERGEN:HBG052638 GO:GO:0018964 EMBL:D10028
EMBL:BC039157 IPI:IPI00118385 IPI:IPI00608056 PIR:S21104
RefSeq:NP_001171127.1 RefSeq:NP_001171128.1 RefSeq:NP_032195.1
UniGene:Mm.278672 ProteinModelPortal:P35438 SMR:P35438
DIP:DIP-31577N IntAct:P35438 MINT:MINT-135802 STRING:P35438
PhosphoSite:P35438 PaxDb:P35438 PRIDE:P35438
Ensembl:ENSMUST00000028335 Ensembl:ENSMUST00000114312 GeneID:14810
KEGG:mmu:14810 UCSC:uc008iri.2 UCSC:uc008irk.2 BindingDB:P35438
ChEMBL:CHEMBL2895 NextBio:286995 Bgee:P35438 CleanEx:MM_GRIN1
Genevestigator:P35438 GermOnline:ENSMUSG00000026959 GO:GO:0021586
Uniprot:P35438
Length = 938
Score = 238 (88.8 bits), Expect = 9.1e-29, Sum P(4) = 9.1e-29
Identities = 82/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 491 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 550
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 551 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 610
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 611 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 670
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 671 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 729
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++ +
Sbjct: 730 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDL 788
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 789 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 832
Score = 151 (58.2 bits), Expect = 9.1e-29, Sum P(4) = 9.1e-29
Identities = 33/114 (28%), Positives = 53/114 (46%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAP 108
FLRT +Q +++ Y W +I + DD GR L L ++ +K
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQ 196
Query: 109 FSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
F PG + +LL+ A +E+RV ++ + D T++ A L MT YVW+
Sbjct: 197 FDPGTKN--VTALLMEARDLEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 248
Score = 61 (26.5 bits), Expect = 9.1e-29, Sum P(4) = 9.1e-29
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 273 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 320
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 321 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 373
Score = 49 (22.3 bits), Expect = 9.1e-29, Sum P(4) = 9.1e-29
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 379 IIWPGGETEKPRGY 392
>FB|FBgn0010399 [details] [associations]
symbol:Nmdar1 "NMDA receptor 1" species:7227 "Drosophila
melanogaster" [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=ISS;IDA;NAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IGI;IMP] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IPI] [GO:0007616
"long-term memory" evidence=IGI;IMP] [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0072375 "medium-term memory"
evidence=IMP] [GO:0008306 "associative learning" evidence=IDA]
[GO:0042331 "phototaxis" evidence=IDA] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] [GO:0050975 "sensory
perception of touch" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 EMBL:AE014297 GO:GO:0008355
GO:GO:0014069 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0042331 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
GO:GO:0007476 GO:GO:0072375 InterPro:IPR001828 GO:GO:0055074
GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GeneTree:ENSGT00700000104113 GO:GO:0004972 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH
EMBL:X71790 EMBL:AY070577 PIR:S33754 RefSeq:NP_730940.1
UniGene:Dm.3670 HSSP:Q05586 ProteinModelPortal:Q24418 SMR:Q24418
STRING:Q24418 PRIDE:Q24418 EnsemblMetazoa:FBtr0078763 GeneID:40665
KEGG:dme:Dmel_CG2902 UCSC:CG2902-RA CTD:40665 FlyBase:FBgn0010399
HOGENOM:HOG000184780 InParanoid:Q24418 PhylomeDB:Q24418
GenomeRNAi:40665 NextBio:819920 Bgee:Q24418 Uniprot:Q24418
Length = 997
Score = 237 (88.5 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 76/332 (22%), Positives = 157/332 (47%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKP 493
+ ++ ++ + D V +TI R + ++F++P+ G+ ++ S+ +FL+P
Sbjct: 512 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQP 571
Query: 494 FTIPMWLVTGGFFLFVGAVVWILEH-----RF---NNEFRGPPSQQLVTIFWFSFSTMFF 545
F+ +W++ V V+++L+ RF +++ + L + WF++ +
Sbjct: 572 FSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLN 631
Query: 546 SH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI-DSLISST- 601
S E T S R +SYTA+L + L +++ +++ GI D+ + +T
Sbjct: 632 SGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 691
Query: 602 EPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAIVDELPY 658
E + GS Y +++++ R ++ N A+ KG +A I D
Sbjct: 692 ENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVKKGKLMAFIWDS-SR 750
Query: 659 IELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT 718
+E SK +CE T G+ F +SG+G Q+ SP ++ AIL+ E+G ++K+ +W+
Sbjct: 751 LEYEASK-DCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF 809
Query: 719 YNECSMDLSPADGGGSRLSLKSFWGLFLICGI 750
+ + + + L LK+ G+F++ G+
Sbjct: 810 HGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 841
Score = 117 (46.2 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 42/179 (23%), Positives = 77/179 (43%)
Query: 1 MENEVVAAI--GPQSSGIAH--VISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQS 55
+EN V A + Q+SG +S+ ++P++ + D + + FLRT
Sbjct: 97 IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPP 156
Query: 56 DYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLG--DALSKK-------RAKISYK 106
Y+Q +++ ++ + +VI I D GR ++LG S+ RA +
Sbjct: 157 YYHQADVWLEMLSHFAYTKVIIIHSSDTDGR---AILGRFQTTSQTYYDDVDVRATVELI 213
Query: 107 APFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATD 165
F P + L+ +SRV++++ + + IF A MT +VWI T+
Sbjct: 214 VEFEP--KLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
Score = 102 (41.0 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 230 DSVWLVAHALDALL-NEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNF 288
DSV+++A A+ ++ NE T + PK D S +N ++ G++ Q L N
Sbjct: 299 DSVYVLASAIKEMISNE----TIAEAPK--DCGDSAVN------WESGKRLFQYLKSRNI 346
Query: 289 TGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRI-GYWSNYSGLSVVAPEILYTKPPNSSS 347
TG +G++ FD + + + YDV+NI + + G +S S + + I N S
Sbjct: 347 TGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSYDSMRAKMRMRI------NDSE 400
Query: 348 NRHLYSVIWPGEITATPRGWVFPNN 372
+IWPG+ P G + P +
Sbjct: 401 ------IIWPGKQRRKPEGIMIPTH 419
Score = 98 (39.6 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 30/134 (22%), Positives = 66/134 (49%)
Query: 400 KGYCIDVF-EAAVNL-LPYPV---PH----NYIMYGNGKRNPI---YNDIVQQVALNKFD 447
+GYCID+ E + + Y + P +YI+ N + + ++ ++ + D
Sbjct: 466 RGYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNNTGAMTLRKEWTGLIGELVNERAD 525
Query: 448 AAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFL 507
V +TI R + ++F++P+ G+ ++ S+ +FL+PF+ +W++
Sbjct: 526 MIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 585
Query: 508 FVGAVVWILEHRFN 521
V V+++L+ RF+
Sbjct: 586 VVALVLYLLD-RFS 598
>UNIPROTKB|B3P2E5 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7220 "Drosophila erecta" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH954181 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_001978937.1
ProteinModelPortal:B3P2E5 EnsemblMetazoa:FBtr0131035 GeneID:6552207
KEGG:der:Dere_GG10981 FlyBase:FBgn0103284 Uniprot:B3P2E5
Length = 997
Score = 237 (88.5 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 76/332 (22%), Positives = 157/332 (47%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKP 493
+ ++ ++ + D V +TI R + ++F++P+ G+ ++ S+ +FL+P
Sbjct: 512 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQP 571
Query: 494 FTIPMWLVTGGFFLFVGAVVWILEH-----RF---NNEFRGPPSQQLVTIFWFSFSTMFF 545
F+ +W++ V V+++L+ RF +++ + L + WF++ +
Sbjct: 572 FSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLN 631
Query: 546 SH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI-DSLISST- 601
S E T S R +SYTA+L + L +++ +++ GI D+ + +T
Sbjct: 632 SGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 691
Query: 602 EPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAIVDELPY 658
E + GS Y +++++ R ++ N A+ KG +A I D
Sbjct: 692 ENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVKKGKLMAFIWDS-SR 750
Query: 659 IELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT 718
+E SK +CE T G+ F +SG+G Q+ SP ++ AIL+ E+G ++K+ +W+
Sbjct: 751 LEYEASK-DCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF 809
Query: 719 YNECSMDLSPADGGGSRLSLKSFWGLFLICGI 750
+ + + + L LK+ G+F++ G+
Sbjct: 810 HGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 841
Score = 117 (46.2 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 42/179 (23%), Positives = 77/179 (43%)
Query: 1 MENEVVAAI--GPQSSGIAH--VISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQS 55
+EN V A + Q+SG +S+ ++P++ + D + + FLRT
Sbjct: 97 IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPP 156
Query: 56 DYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLG--DALSKK-------RAKISYK 106
Y+Q +++ ++ + +VI I D GR ++LG S+ RA +
Sbjct: 157 YYHQADVWLEMLSHFAYTKVIIIHSSDTDGR---AILGRFQTTSQTYYDDVDVRATVELI 213
Query: 107 APFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATD 165
F P + L+ +SRV++++ + + IF A MT +VWI T+
Sbjct: 214 VEFEP--KLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
Score = 102 (41.0 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 230 DSVWLVAHALDALL-NEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNF 288
DSV+++A A+ ++ NE T + PK D S +N ++ G++ Q L N
Sbjct: 299 DSVYVLASAIKEMISNE----TIAEAPK--DCGDSAVN------WESGKRLFQYLKSRNI 346
Query: 289 TGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRI-GYWSNYSGLSVVAPEILYTKPPNSSS 347
TG +G++ FD + + + YDV+NI + + G +S S + + I N S
Sbjct: 347 TGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSYDSMRAKMRMRI------NDSE 400
Query: 348 NRHLYSVIWPGEITATPRGWVFPNN 372
+IWPG+ P G + P +
Sbjct: 401 ------IIWPGKQRRKPEGIMIPTH 419
Score = 37 (18.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 402 YCIDVFEAAVNLLPYPV 418
+C +FE A+ LL P+
Sbjct: 8 FCWPLFELAIVLLVAPI 24
>UNIPROTKB|B4I414 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7238 "Drosophila sechellia" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH480821 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002038420.1
ProteinModelPortal:B4I414 EnsemblMetazoa:FBtr0193612 GeneID:6613956
KEGG:dse:Dsec_GM10627 FlyBase:FBgn0165573 Uniprot:B4I414
Length = 997
Score = 237 (88.5 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 76/332 (22%), Positives = 157/332 (47%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKP 493
+ ++ ++ + D V +TI R + ++F++P+ G+ ++ S+ +FL+P
Sbjct: 512 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQP 571
Query: 494 FTIPMWLVTGGFFLFVGAVVWILEH-----RF---NNEFRGPPSQQLVTIFWFSFSTMFF 545
F+ +W++ V V+++L+ RF +++ + L + WF++ +
Sbjct: 572 FSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLN 631
Query: 546 SH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI-DSLISST- 601
S E T S R +SYTA+L + L +++ +++ GI D+ + +T
Sbjct: 632 SGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 691
Query: 602 EPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAIVDELPY 658
E + GS Y +++++ R ++ N A+ KG +A I D
Sbjct: 692 ENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVKKGKLMAFIWDS-SR 750
Query: 659 IELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT 718
+E SK +CE T G+ F +SG+G Q+ SP ++ AIL+ E+G ++K+ +W+
Sbjct: 751 LEYEASK-DCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF 809
Query: 719 YNECSMDLSPADGGGSRLSLKSFWGLFLICGI 750
+ + + + L LK+ G+F++ G+
Sbjct: 810 HGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 841
Score = 117 (46.2 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 42/179 (23%), Positives = 77/179 (43%)
Query: 1 MENEVVAAI--GPQSSGIAH--VISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQS 55
+EN V A + Q+SG +S+ ++P++ + D + + FLRT
Sbjct: 97 IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPP 156
Query: 56 DYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLG--DALSKK-------RAKISYK 106
Y+Q +++ ++ + +VI I D GR ++LG S+ RA +
Sbjct: 157 YYHQADVWLEMLSHFAYTKVIIIHSSDTDGR---AILGRFQTTSQTYYDDVDVRATVELI 213
Query: 107 APFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATD 165
F P + L+ +SRV++++ + + IF A MT +VWI T+
Sbjct: 214 VEFEP--KLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
Score = 102 (41.0 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 230 DSVWLVAHALDALL-NEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNF 288
DSV+++A A+ ++ NE T + PK D S +N ++ G++ Q L N
Sbjct: 299 DSVYVLASAIKEMISNE----TIAEAPK--DCGDSAVN------WESGKRLFQYLKSRNI 346
Query: 289 TGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRI-GYWSNYSGLSVVAPEILYTKPPNSSS 347
TG +G++ FD + + + YDV+NI + + G +S S + + I N S
Sbjct: 347 TGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSYDSMRAKMRMRI------NDSE 400
Query: 348 NRHLYSVIWPGEITATPRGWVFPNN 372
+IWPG+ P G + P +
Sbjct: 401 ------IIWPGKQRRKPEGIMIPTH 419
>UNIPROTKB|B4PVB0 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7245 "Drosophila yakuba" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
EMBL:CM000160 InterPro:IPR001828 GO:GO:0055074 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_002096067.1 ProteinModelPortal:B4PVB0 STRING:B4PVB0
EnsemblMetazoa:FBtr0271792 GeneID:6535418 KEGG:dya:Dyak_GE25274
FlyBase:FBgn0242356 Uniprot:B4PVB0
Length = 997
Score = 237 (88.5 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 76/332 (22%), Positives = 157/332 (47%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKP 493
+ ++ ++ + D V +TI R + ++F++P+ G+ ++ S+ +FL+P
Sbjct: 512 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQP 571
Query: 494 FTIPMWLVTGGFFLFVGAVVWILEH-----RF---NNEFRGPPSQQLVTIFWFSFSTMFF 545
F+ +W++ V V+++L+ RF +++ + L + WF++ +
Sbjct: 572 FSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLN 631
Query: 546 SH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI-DSLISST- 601
S E T S R +SYTA+L + L +++ +++ GI D+ + +T
Sbjct: 632 SGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 691
Query: 602 EPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAIVDELPY 658
E + GS Y +++++ R ++ N A+ KG +A I D
Sbjct: 692 ENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVKKGKLMAFIWDS-SR 750
Query: 659 IELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT 718
+E SK +CE T G+ F +SG+G Q+ SP ++ AIL+ E+G ++K+ +W+
Sbjct: 751 LEYEASK-DCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF 809
Query: 719 YNECSMDLSPADGGGSRLSLKSFWGLFLICGI 750
+ + + + L LK+ G+F++ G+
Sbjct: 810 HGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 841
Score = 117 (46.2 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 42/179 (23%), Positives = 77/179 (43%)
Query: 1 MENEVVAAI--GPQSSGIAH--VISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQS 55
+EN V A + Q+SG +S+ ++P++ + D + + FLRT
Sbjct: 97 IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPP 156
Query: 56 DYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLG--DALSKK-------RAKISYK 106
Y+Q +++ ++ + +VI I D GR ++LG S+ RA +
Sbjct: 157 YYHQADVWLEMLSHFAYTKVIIIHSSDTDGR---AILGRFQTTSQTYYDDVDVRATVELI 213
Query: 107 APFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATD 165
F P + L+ +SRV++++ + + IF A MT +VWI T+
Sbjct: 214 VEFEP--KLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
Score = 102 (41.0 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 230 DSVWLVAHALDALL-NEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNF 288
DSV+++A A+ ++ NE T + PK D S +N ++ G++ Q L N
Sbjct: 299 DSVYVLASAIKEMISNE----TIAEAPK--DCGDSAVN------WESGKRLFQYLKSRNI 346
Query: 289 TGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRI-GYWSNYSGLSVVAPEILYTKPPNSSS 347
TG +G++ FD + + + YDV+NI + + G +S S + + I N S
Sbjct: 347 TGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSYDSMRAKMRMRI------NDSE 400
Query: 348 NRHLYSVIWPGEITATPRGWVFPNN 372
+IWPG+ P G + P +
Sbjct: 401 ------IIWPGKQRRKPEGIMIPTH 419
>UNIPROTKB|B4QWW7 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7240 "Drosophila simulans" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CM000364 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002102226.1
ProteinModelPortal:B4QWW7 EnsemblMetazoa:FBtr0219522 GeneID:6726819
KEGG:dsi:Dsim_GD19612 FlyBase:FBgn0191104 Uniprot:B4QWW7
Length = 997
Score = 237 (88.5 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 76/332 (22%), Positives = 157/332 (47%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKP 493
+ ++ ++ + D V +TI R + ++F++P+ G+ ++ S+ +FL+P
Sbjct: 512 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQP 571
Query: 494 FTIPMWLVTGGFFLFVGAVVWILEH-----RF---NNEFRGPPSQQLVTIFWFSFSTMFF 545
F+ +W++ V V+++L+ RF +++ + L + WF++ +
Sbjct: 572 FSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLN 631
Query: 546 SH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI-DSLISST- 601
S E T S R +SYTA+L + L +++ +++ GI D+ + +T
Sbjct: 632 SGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 691
Query: 602 EPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAIVDELPY 658
E + GS Y +++++ R ++ N A+ KG +A I D
Sbjct: 692 ENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVKKGKLMAFIWDS-SR 750
Query: 659 IELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT 718
+E SK +CE T G+ F +SG+G Q+ SP ++ AIL+ E+G ++K+ +W+
Sbjct: 751 LEYEASK-DCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF 809
Query: 719 YNECSMDLSPADGGGSRLSLKSFWGLFLICGI 750
+ + + + L LK+ G+F++ G+
Sbjct: 810 HGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 841
Score = 117 (46.2 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 42/179 (23%), Positives = 77/179 (43%)
Query: 1 MENEVVAAI--GPQSSGIAH--VISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQS 55
+EN V A + Q+SG +S+ ++P++ + D + + FLRT
Sbjct: 97 IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPP 156
Query: 56 DYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLG--DALSKK-------RAKISYK 106
Y+Q +++ ++ + +VI I D GR ++LG S+ RA +
Sbjct: 157 YYHQADVWLEMLSHFAYTKVIIIHSSDTDGR---AILGRFQTTSQTYYDDVDVRATVELI 213
Query: 107 APFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATD 165
F P + L+ +SRV++++ + + IF A MT +VWI T+
Sbjct: 214 VEFEP--KLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 270
Score = 102 (41.0 bits), Expect = 1.3e-28, Sum P(3) = 1.3e-28
Identities = 40/145 (27%), Positives = 68/145 (46%)
Query: 230 DSVWLVAHALDALL-NEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNF 288
DSV+++A A+ ++ NE T + PK D S +N ++ G++ Q L N
Sbjct: 299 DSVYVLASAIKEMISNE----TIAEAPK--DCGDSAVN------WESGKRLFQYLKSRNI 346
Query: 289 TGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRI-GYWSNYSGLSVVAPEILYTKPPNSSS 347
TG +G++ FD + + + YDV+NI + + G +S S + + I N S
Sbjct: 347 TGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFSYDSMRAKMRMRI------NDSE 400
Query: 348 NRHLYSVIWPGEITATPRGWVFPNN 372
+IWPG+ P G + P +
Sbjct: 401 ------IIWPGKQRRKPEGIMIPTH 419
>RGD|70958 [details] [associations]
symbol:Gria3 "glutamate receptor, ionotropic, AMPA 3"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=TAS] [GO:0010226 "response to
lithium ion" evidence=IEP] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030425 "dendrite" evidence=IDA] [GO:0032279
"asymmetric synapse" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043083 "synaptic
cleft" evidence=IDA] [GO:0043195 "terminal bouton" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043198 "dendritic
shaft" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA]
[GO:0043234 "protein complex" evidence=IPI] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0060992 "response to
fungicide" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0014069
GO:GO:0060992 GO:GO:0010226 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0043195
GO:GO:0032281 GO:GO:0043083 GO:GO:0001919 InterPro:IPR001828
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 CTD:2892 KO:K05199 OrthoDB:EOG4XKV68 PDB:3LSW
PDB:3LSX PDBsum:3LSW PDBsum:3LSX EMBL:M36420 EMBL:X54656 EMBL:M38062
EMBL:M85036 IPI:IPI00195443 IPI:IPI00231095 PIR:C40170
RefSeq:NP_001106213.1 RefSeq:NP_116785.2 UniGene:Rn.74049 PDB:3DLN
PDB:3DP4 PDB:3M3F PDB:3M3K PDB:3O21 PDB:3P3W PDB:3RT6 PDB:3RT8
PDB:4F1Y PDB:4F22 PDB:4F29 PDB:4F2O PDB:4F2Q PDB:4F31 PDB:4F39
PDB:4F3B PDB:4F3G PDBsum:3DLN PDBsum:3DP4 PDBsum:3M3F PDBsum:3M3K
PDBsum:3O21 PDBsum:3P3W PDBsum:3RT6 PDBsum:3RT8 PDBsum:4F1Y
PDBsum:4F22 PDBsum:4F29 PDBsum:4F2O PDBsum:4F2Q PDBsum:4F31
PDBsum:4F39 PDBsum:4F3B PDBsum:4F3G ProteinModelPortal:P19492
SMR:P19492 IntAct:P19492 MINT:MINT-86220 STRING:P19492
PhosphoSite:P19492 PRIDE:P19492 GeneID:29628 KEGG:rno:29628
UCSC:RGD:70958 BindingDB:P19492 ChEMBL:CHEMBL3504
EvolutionaryTrace:P19492 NextBio:609848 ArrayExpress:P19492
Genevestigator:P19492 GermOnline:ENSRNOG00000007682 Uniprot:P19492
Length = 888
Score = 186 (70.5 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 71/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 653 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 712
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 713 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNAV 772
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 773 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 832
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 833 MMVALIEF 840
Score = 153 (58.9 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 400 KGYCIDV-FEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ +E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 446 EGYCVDLAYEIAKHVR---IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 502
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G
Sbjct: 503 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGV 560
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 561 SVVLFLVSRFS 571
Score = 115 (45.5 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 61/296 (20%), Positives = 123/296 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ YY W + + ++ D + G + + + +A + +++ + S G +
Sbjct: 142 AILSLLSYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTAR---SVGNIKDVQEFR 197
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGM-TAGSYVWIATDWLPSVLDSTEPVD 178
++ + + + +++ + TI LG + G + +A +L E V
Sbjct: 198 RIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LERVM 255
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVW 233
N+ G + + P + + FI RW L +E N+P + S AL +D++
Sbjct: 256 HGGANIT-GFQIVNNENP---MVQQFIQRWVRLDEREFPEAKNAPLKYTS-AL-THDAIL 309
Query: 234 LVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSG 293
++A A L + D + G L ++ + G + L + G++G
Sbjct: 310 VIAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTG 362
Query: 294 EIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
I+FD N DV + +GSR+ GYW+ Y + + + + +SS NR
Sbjct: 363 NIQFDTYGRRTNYTIDVYEMKVSGSRKAGYWNEYERFVPFSDQQI-SNDSSSSENR 417
Score = 46 (21.3 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N +P+ +++
Sbjct: 837 LIEFCYKSRAESKRMKLTKNTQNFKPAPATN 867
>UNIPROTKB|P19492 [details] [associations]
symbol:Gria3 "Glutamate receptor 3" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0014069 GO:GO:0060992
GO:GO:0010226 GO:GO:0043198 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0032279 GO:GO:0043195 GO:GO:0032281
GO:GO:0043083 GO:GO:0001919 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
CTD:2892 KO:K05199 OrthoDB:EOG4XKV68 PDB:3LSW PDB:3LSX PDBsum:3LSW
PDBsum:3LSX EMBL:M36420 EMBL:X54656 EMBL:M38062 EMBL:M85036
IPI:IPI00195443 IPI:IPI00231095 PIR:C40170 RefSeq:NP_001106213.1
RefSeq:NP_116785.2 UniGene:Rn.74049 PDB:3DLN PDB:3DP4 PDB:3M3F
PDB:3M3K PDB:3O21 PDB:3P3W PDB:3RT6 PDB:3RT8 PDB:4F1Y PDB:4F22
PDB:4F29 PDB:4F2O PDB:4F2Q PDB:4F31 PDB:4F39 PDB:4F3B PDB:4F3G
PDBsum:3DLN PDBsum:3DP4 PDBsum:3M3F PDBsum:3M3K PDBsum:3O21
PDBsum:3P3W PDBsum:3RT6 PDBsum:3RT8 PDBsum:4F1Y PDBsum:4F22
PDBsum:4F29 PDBsum:4F2O PDBsum:4F2Q PDBsum:4F31 PDBsum:4F39
PDBsum:4F3B PDBsum:4F3G ProteinModelPortal:P19492 SMR:P19492
IntAct:P19492 MINT:MINT-86220 STRING:P19492 PhosphoSite:P19492
PRIDE:P19492 GeneID:29628 KEGG:rno:29628 UCSC:RGD:70958
BindingDB:P19492 ChEMBL:CHEMBL3504 EvolutionaryTrace:P19492
NextBio:609848 ArrayExpress:P19492 Genevestigator:P19492
GermOnline:ENSRNOG00000007682 Uniprot:P19492
Length = 888
Score = 186 (70.5 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 71/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 653 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 712
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 713 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNAV 772
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 773 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 832
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 833 MMVALIEF 840
Score = 153 (58.9 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 400 KGYCIDV-FEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ +E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 446 EGYCVDLAYEIAKHVR---IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 502
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G
Sbjct: 503 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGV 560
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 561 SVVLFLVSRFS 571
Score = 115 (45.5 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 61/296 (20%), Positives = 123/296 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ YY W + + ++ D + G + + + +A + +++ + S G +
Sbjct: 142 AILSLLSYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTAR---SVGNIKDVQEFR 197
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGM-TAGSYVWIATDWLPSVLDSTEPVD 178
++ + + + +++ + TI LG + G + +A +L E V
Sbjct: 198 RIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LERVM 255
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVW 233
N+ G + + P + + FI RW L +E N+P + S AL +D++
Sbjct: 256 HGGANIT-GFQIVNNENP---MVQQFIQRWVRLDEREFPEAKNAPLKYTS-AL-THDAIL 309
Query: 234 LVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSG 293
++A A L + D + G L ++ + G + L + G++G
Sbjct: 310 VIAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTG 362
Query: 294 EIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
I+FD N DV + +GSR+ GYW+ Y + + + + +SS NR
Sbjct: 363 NIQFDTYGRRTNYTIDVYEMKVSGSRKAGYWNEYERFVPFSDQQI-SNDSSSSENR 417
Score = 46 (21.3 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N +P+ +++
Sbjct: 837 LIEFCYKSRAESKRMKLTKNTQNFKPAPATN 867
>ZFIN|ZDB-GENE-030131-8013 [details] [associations]
symbol:gria4b "glutamate receptor, ionotropic,
AMPA 4b" species:7955 "Danio rerio" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-8013 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839
KO:K05200 EMBL:AF525748 IPI:IPI00509003 RefSeq:NP_997917.1
UniGene:Dr.81140 ProteinModelPortal:Q71E58 SMR:Q71E58 GeneID:336069
KEGG:dre:336069 CTD:336069 InParanoid:Q71E58 NextBio:20811163
Uniprot:Q71E58
Length = 904
Score = 179 (68.1 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 71/249 (28%), Positives = 105/249 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 590 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 649
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L T+ G D GS + ++ + E +K+ E
Sbjct: 650 ERMVSPIESAEDLAKQTDIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPTVFTKTT 709
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 710 AEGVARVRKSKGKYAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGSQLGSAV 769
Query: 697 STAILQLSENGDLQKIHNKW-LTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC----GI 750
+ A+L+L+E G L K+ NKW EC S D LSL + G+F I G+
Sbjct: 770 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGGEKDKSSQALSLSNVAGVFYILVGGLGL 829
Query: 751 ACFLALIFF 759
A +ALI F
Sbjct: 830 AMLVALIEF 838
Score = 149 (57.5 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 36/128 (28%), Positives = 68/128 (53%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVALNKFDAAVGDITI 455
+GYC+D+ + + + + G G R+P I+N +V ++ K + AV +TI
Sbjct: 444 EGYCVDLASEIAKHIGFKYKISIVPDGKYGARDPETKIWNGMVGELVYGKAEIAVAPLTI 503
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-AVV 513
R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +VV
Sbjct: 504 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVSVV 561
Query: 514 WILEHRFN 521
L RF+
Sbjct: 562 LFLVSRFS 569
Score = 129 (50.5 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 69/316 (21%), Positives = 123/316 (38%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYK--APFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + ++ A + ++
Sbjct: 141 ALLSLLDHYDWNRFVFLY-DTD---RGYSIL-QAIMEKAGQNGWQVSAICVENFNDASYR 195
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + + + S+G Y +I + L DI
Sbjct: 196 QLLEDLDRRQEKTFVIDLEAERLNNMLEQIVSVGKHVKGYHYIMAN-----LGFK---DI 247
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSV 232
+ + G V + + + RW L +E ++P + S AL YD V
Sbjct: 248 NLERFMHGGANVTGFQLVDFSNPMVIKLMQRWNKLDQREYPGSDAPPKYTS-AL-TYDGV 305
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLS 292
++A A L + K S G L + ++ G +TL ++ GL+
Sbjct: 306 MVMAEAFRNLRRQ--KVDISR----RGIAGDCL-ANPAAPWNQGIDMERTLKQVRLQGLT 358
Query: 293 GEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRH-L 351
G ++FD VN DV + G RRIGYW++ L + L NR +
Sbjct: 359 GNVQFDHYGRRVNYTMDVFELKSNGPRRIGYWNDADKLVLTQDHALLPNETYGMENRTVI 418
Query: 352 YSVIWPGEITATPRGW 367
+ I G + W
Sbjct: 419 VTTIMEGPYVMLKKNW 434
Score = 40 (19.1 bits), Expect = 9.8e-09, Sum P(2) = 9.8e-09
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 54 QSDYYQMHAVADLVEYYGWREVIAIFVDDDYG 85
Q + Y + +++ ++ G++ I+I D YG
Sbjct: 442 QYEGYCVDLASEIAKHIGFKYKISIVPDGKYG 473
>UNIPROTKB|F1P2J9 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00586084
ProteinModelPortal:F1P2J9 Ensembl:ENSGALT00000040369 Uniprot:F1P2J9
Length = 880
Score = 241 (89.9 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 83/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 404 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 463
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 464 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 523
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 524 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 583
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 584 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 642
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S AIL+ ENG ++ +
Sbjct: 643 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDL 701
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 702 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 745
Score = 155 (59.6 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 35/114 (30%), Positives = 54/114 (47%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAP 108
FLRT +Q + +++ + W VI I DD GR L L ++ +K
Sbjct: 52 FLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEERESKAEKVLQ 111
Query: 109 FSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
F PG + SLL+ A +E+RV ++ + D T++ A L MT YVW+
Sbjct: 112 FDPGTKN--VTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNMTGSGYVWL 163
Score = 55 (24.4 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ L K ++ P+ G + N + ++ G
Sbjct: 188 NGKNESA-HISDAVAVVAQAVHDLFE---KENITDPPR-----GCVGNTN---IWKTGPL 235
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ ++ G++G + F D D+ N Y ++N+ ++G Y+G +V+
Sbjct: 236 FKRVLMSSKYSEGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGSNVL 288
Score = 46 (21.3 bits), Expect = 1.9e-27, Sum P(3) = 1.9e-27
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 324 WSNYSGLSVVAPEILYTKPPNSSSN-RHLYSVIWPGEITATPRGW 367
++NYS +++ +++ N S+ + +IWPG T P+G+
Sbjct: 263 FANYSIMNLQNRKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGY 307
>UNIPROTKB|G3V8Y9 [details] [associations]
symbol:Gria3 "Glutamate receptor 3" species:10116 "Rattus
norvegicus" [GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole
propionate selective glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:70958 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 UniGene:Rn.74049 EMBL:CH473991
ProteinModelPortal:G3V8Y9 Ensembl:ENSRNOT00000029031 Uniprot:G3V8Y9
Length = 888
Score = 185 (70.2 bits), Expect = 2.9e-28, Sum P(4) = 2.9e-28
Identities = 71/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 593 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 652
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 653 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 712
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 713 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAV 772
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 773 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 832
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 833 MMVALIEF 840
Score = 153 (58.9 bits), Expect = 2.9e-28, Sum P(4) = 2.9e-28
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 400 KGYCIDV-FEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ +E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 446 EGYCVDLAYEIAKHVR---IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 502
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G
Sbjct: 503 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGV 560
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 561 SVVLFLVSRFS 571
Score = 113 (44.8 bits), Expect = 2.9e-28, Sum P(4) = 2.9e-28
Identities = 61/296 (20%), Positives = 123/296 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ YY W + + ++ D + G + + + +A + +++ + S G +
Sbjct: 142 AILSLLGYYKWEKFVYLY-DTERGFSVLQAIMEAAVQNNWQVTAR---SVGNIKDVQEFR 197
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGM-TAGSYVWIATDWLPSVLDSTEPVD 178
++ + + + +++ + TI LG + G + +A +L E V
Sbjct: 198 RIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LERVM 255
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVW 233
N+ G + + P + + FI RW L +E N+P + S AL +D++
Sbjct: 256 HGGANIT-GFQIVNNENP---MVQQFIQRWVRLDEREFPEAKNAPLKYTS-AL-THDAIL 309
Query: 234 LVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSG 293
++A A L + D + G L ++ + G + L + G++G
Sbjct: 310 VIAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTG 362
Query: 294 EIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
I+FD N DV + +GSR+ GYW+ Y + + + + +SS NR
Sbjct: 363 NIQFDTYGRRTNYTIDVYEMKVSGSRKAGYWNEYERFVPFSDQQI-SNDSSSSENR 417
Score = 46 (21.3 bits), Expect = 2.9e-28, Sum P(4) = 2.9e-28
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N +P+ +++
Sbjct: 837 LIEFCYKSRAESKRMKLTKNTQNFKPAPATN 867
>UNIPROTKB|E1BGZ0 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole
propionate selective glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:MVQQFLQ EMBL:DAAA02067291 EMBL:DAAA02067292
EMBL:DAAA02067293 EMBL:DAAA02067294 IPI:IPI00692662
Ensembl:ENSBTAT00000015717 BindingDB:E1BGZ0 Uniprot:E1BGZ0
Length = 754
Score = 185 (70.2 bits), Expect = 4.8e-28, Sum P(4) = 4.8e-28
Identities = 71/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 459 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 518
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 519 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 578
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 579 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAV 638
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 639 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 698
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 699 MMVALIEF 706
Score = 153 (58.9 bits), Expect = 4.8e-28, Sum P(4) = 4.8e-28
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 400 KGYCIDV-FEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ +E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 312 EGYCVDLAYEIAKHVR---IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 368
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G
Sbjct: 369 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGV 426
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 427 SVVLFLVSRFS 437
Score = 107 (42.7 bits), Expect = 4.8e-28, Sum P(4) = 4.8e-28
Identities = 57/274 (20%), Positives = 114/274 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ +Y W + + ++ D + G + + + +A + +++ + S G +
Sbjct: 8 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTAR---SVGNIKDVQEFR 63
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGM-TAGSYVWIATDWLPSVLDSTEPVD 178
++ + + + +++ + TI LG + G + +A +L E V
Sbjct: 64 RIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LERVM 121
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVW 233
N+ G + + P + + FI RW L +E N+P + S AL +D++
Sbjct: 122 HGGANIT-GFQIVNNENP---MVQQFIQRWVRLDEREFPEAKNAPLKYTS-AL-THDAIL 175
Query: 234 LVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSG 293
++A A L + D + G L ++ + G + L + G++G
Sbjct: 176 VIAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTG 228
Query: 294 EIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNY 327
I+FD N DV + TGSR+ GYW+ Y
Sbjct: 229 NIQFDTYGRRTNYTIDVYEMKVTGSRKAGYWNEY 262
Score = 46 (21.3 bits), Expect = 4.8e-28, Sum P(4) = 4.8e-28
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N +P+ +++
Sbjct: 703 LIEFCYKSRAESKRMKLTKNTQNFKPAPATN 733
>ZFIN|ZDB-GENE-040913-1 [details] [associations]
symbol:grid2 "glutamate receptor, ionotropic, delta
2" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;ISS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=ISS] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-040913-1 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG276334 HOGENOM:HOG000264260
HOVERGEN:HBG051840 EMBL:AB154207 IPI:IPI00487693
RefSeq:NP_001004123.1 UniGene:Dr.116180 ProteinModelPortal:Q68Y21
SMR:Q68Y21 STRING:Q68Y21 GeneID:448841 KEGG:dre:448841 CTD:2895
InParanoid:Q68Y21 KO:K05207 OrthoDB:EOG4SBDX4 NextBio:20832541
Uniprot:Q68Y21
Length = 1009
Score = 189 (71.6 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 57/220 (25%), Positives = 98/220 (44%)
Query: 396 PPGVKGYCIDVFEAAVNLLPYPVPHNYIM----YGNGKRNPIYNDIVQQVALNKFDAAVG 451
P +G+ IDV +A N L + Y+ YG+ + + +N ++ ++ + D +
Sbjct: 464 PKKYQGFSIDVLDALANYLGFKY-EIYVAPDHKYGSQQADGTWNGLIGELVFKRADVGLS 522
Query: 452 DITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGA 511
+TI R +VDFT YM+ + V+ + +A L PF + +W G L VG
Sbjct: 523 ALTITPERESVVDFTTRYMDYSVGVLLRKAERTVDMFACLAPFDLSLWACIAGTVLLVGT 582
Query: 512 VVWILEHRFNNEFRGP----PSQQLVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXX 566
+V++L + N R P S L WF + + E ++L R
Sbjct: 583 LVYLLN--WLNPPRLPMGSVSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLF 640
Query: 567 XXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG 605
SSYTA+L + LT+ ++ + I+ + L T+ P G
Sbjct: 641 ALIVISSYTANLAAFLTISRIENSIQSLQDLAKQTDLPYG 680
Score = 150 (57.9 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 60/210 (28%), Positives = 94/210 (44%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDG-------SFAWN-YLVDELK 621
SSYTA+L + LT+ ++ + I+ + L T+ P G V D S N + D +
Sbjct: 646 SSYTANLAAFLTISRIENSIQSLQDLAKQTDLPYGTVLDSAVYDQVRSKGMNPFERDPMY 705
Query: 622 IAESRLVKL-----KNMEEYSIALARGPKGGGVAAIVDE--LPYIELFMSKTNCEFRTVG 674
R++ N+EE + R K G A + D L Y+ + + +C TV
Sbjct: 706 SQMWRMINRTGGAENNVEESKEGI-RKVKYGRFAFVWDAAVLEYVAI--NDEDCSLYTVS 762
Query: 675 QEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNE-CSMDLSPADG-- 731
G+G A Q SP S IL+L +NGD+ + KW + C + SP
Sbjct: 763 NNVADRGYGMAMQHGSPYRDIFSQRILELQQNGDMDILKLKWWPRDSPCDL-YSPVGTRK 821
Query: 732 GGSRLSLKSFWGLFLI--CGI--ACFLALI 757
GS L + SF G+F + G+ +C +A +
Sbjct: 822 SGSALDIHSFAGVFFVLAAGVVLSCLIATV 851
Score = 111 (44.1 bits), Expect = 1.1e-27, Sum P(3) = 1.1e-27
Identities = 78/350 (22%), Positives = 138/350 (39%)
Query: 5 VVAAIGPQSSGIAHVISHVVN--ELNVPLLSFG---ATDPTLTSLQYPYFLRTTQSDYYQ 59
+V++IG S+G ++ ++ L + G ++ P T Q + + Y
Sbjct: 93 LVSSIGCMSAGSLQSLADAMHIPHLFIQRAPAGTPRSSCPPTTRAQPDDYTLFVRPPVYL 152
Query: 60 MHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFS------PGA 113
+ +V Y W++ I IF D DY GI D S++ +S + S G
Sbjct: 153 NDVIFQVVMEYTWQKFI-IFYDTDYDIRGIENFLDQTSQQGMDVSLQKVESNINMMITGM 211
Query: 114 SRSA-INSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLD 172
R+ + L + + R V+ ++P T + + A WI + S +D
Sbjct: 212 FRTMRVEELHRYRDTL--RRAVLFMSPATAKAFITEVVETNLVAFDCQWIIINEEISDMD 269
Query: 173 STEPV--DIDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYD 230
E V I + L++ L +T ++ N K+ Y YD
Sbjct: 270 VQELVMKSIGRLTLVRQTFPLPQNTSQRCVRNNHRINTSLCDPKDPKAQMLEITNRYIYD 329
Query: 231 SVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRV----FDGGQQFLQTLLRM 286
+V L+A+ L D K H SM +LS +R + GG+ L+T+ +
Sbjct: 330 TVLLLANTFHRKLE---------DRKWH----SMASLSCIRKGSKPWQGGKSMLETVKKG 376
Query: 287 NFTGLSGEIRFDADKNLVNPAYDVL--NIG---GTGSRRIGYWSNYSGLS 331
+GL+ + F+ + + N +++L N G G G R+ W GL+
Sbjct: 377 GVSGLTSLLEFNDNGSNPNIHFEILGTNYGEDRGRGVSRLATWDPIHGLN 426
>UNIPROTKB|P42263 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0007215 "glutamate
receptor signaling pathway" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0060992
GO:GO:0010226 GO:GO:0007268 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0043195
DrugBank:DB00142 GO:GO:0032281 GO:GO:0043083 GO:GO:0001919
Orphanet:777 EMBL:CH471107 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOVERGEN:HBG051839
EMBL:U10302 EMBL:U10301 EMBL:X82068 EMBL:AF166365 EMBL:AF166362
EMBL:AF166363 EMBL:AF166364 EMBL:AF167332 EMBL:AF166366
EMBL:AF166367 EMBL:AF166368 EMBL:AF166369 EMBL:AF166370
EMBL:AF166371 EMBL:AF166372 EMBL:AF166373 EMBL:AF166375
EMBL:AF166374 EMBL:AL356213 EMBL:AL035426 EMBL:AL590139 EMBL:Z83848
EMBL:Z82899 IPI:IPI00219315 IPI:IPI00298700 PIR:S49460 PIR:S50128
PIR:S53696 RefSeq:NP_000819.3 RefSeq:NP_015564.4 UniGene:Hs.377070
ProteinModelPortal:P42263 SMR:P42263 DIP:DIP-46195N STRING:P42263
TCDB:1.A.10.1.4 PhosphoSite:P42263 DMDM:77416864 PaxDb:P42263
PRIDE:P42263 DNASU:2892 Ensembl:ENST00000264357
Ensembl:ENST00000371251 Ensembl:ENST00000371256 GeneID:2892
KEGG:hsa:2892 UCSC:uc004etq.4 UCSC:uc004etr.4 CTD:2892
GeneCards:GC0XP122318 HGNC:HGNC:4573 HPA:CAB007799 MIM:300699
MIM:305915 neXtProt:NX_P42263 PharmGKB:PA28968 InParanoid:P42263
KO:K05199 OMA:MVQQFLQ OrthoDB:EOG4XKV68 BindingDB:P42263
ChEMBL:CHEMBL3595 ChiTaRS:GRIA3 GenomeRNAi:2892 NextBio:11437
ArrayExpress:P42263 Bgee:P42263 CleanEx:HS_GRIA3
Genevestigator:P42263 GermOnline:ENSG00000125675 Uniprot:P42263
Length = 894
Score = 185 (70.2 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 71/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 599 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 658
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 659 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 718
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 719 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAV 778
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 779 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 838
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 839 MMVALIEF 846
Score = 153 (58.9 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 400 KGYCIDV-FEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ +E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 452 EGYCVDLAYEIAKHVR---IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 508
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G
Sbjct: 509 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGV 566
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 567 SVVLFLVSRFS 577
Score = 104 (41.7 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 60/296 (20%), Positives = 122/296 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ +Y W + + ++ D + G + + + +A + +++ + S G +
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTAR---SVGNIKDVQEFR 203
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGM-TAGSYVWIATDWLPSVLDSTEPVD 178
++ + + + +++ + TI LG + G + +A +L E V
Sbjct: 204 RIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LERVM 261
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVW 233
N+ G + + P + + FI RW L +E N+P + S AL +D++
Sbjct: 262 HGGANIT-GFQIVNNENP---MVQQFIQRWVRLDEREFPEAKNAPLKYTS-AL-THDAIL 315
Query: 234 LVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSG 293
++A A L + D + G L ++ + G + L + G++G
Sbjct: 316 VIAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTG 368
Query: 294 EIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
I+FD N DV + +GSR+ GYW+ Y + + + + SS NR
Sbjct: 369 NIQFDTYGRRTNYTIDVYEMKVSGSRKAGYWNEYERFVPFSDQQI-SNDSASSENR 423
Score = 46 (21.3 bits), Expect = 2.5e-27, Sum P(4) = 2.5e-27
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N +P+ +++
Sbjct: 843 LIEFCYKSRAESKRMKLTKNTQNFKPAPATN 873
>UNIPROTKB|B4MU83 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7260 "Drosophila willistoni" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH EMBL:CH963852
RefSeq:XP_002064686.1 ProteinModelPortal:B4MU83 STRING:B4MU83
EnsemblMetazoa:FBtr0254355 GeneID:6641663 KEGG:dwi:Dwil_GK23704
FlyBase:FBgn0225666 InParanoid:B4MU83 Uniprot:B4MU83
Length = 982
Score = 240 (89.5 bits), Expect = 5.1e-27, Sum P(3) = 5.1e-27
Identities = 77/332 (23%), Positives = 157/332 (47%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKP 493
+ ++ Q+ + D V +TI R + ++F++P+ G+ ++ S+ +FL+P
Sbjct: 500 WTGLIGQLVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQP 559
Query: 494 FTIPMWLVTGGFFLFVGAVVWILEH-----RF---NNEFRGPPSQQLVTIFWFSFSTMFF 545
F+ +W++ V V+++L+ RF +++ + L + WF++ +
Sbjct: 560 FSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLN 619
Query: 546 SH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI-DSLISST- 601
S E T S R +SYTA+L + L +++ +++ GI D+ + +T
Sbjct: 620 SGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 679
Query: 602 EPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAIVDELPY 658
E + GS Y +++++ R ++ N A+ KG +A I D
Sbjct: 680 ENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEHAIQDVKKGKLMAFIWDS-SR 738
Query: 659 IELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT 718
+E SK +CE T G+ F +SG+G Q+ SP ++ AIL+ E+G ++K+ +W+
Sbjct: 739 LEYEASK-DCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF 797
Query: 719 YNECSMDLSPADGGGSRLSLKSFWGLFLICGI 750
+ + + + L LK+ G+F++ G+
Sbjct: 798 HGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 829
Score = 108 (43.1 bits), Expect = 5.1e-27, Sum P(3) = 5.1e-27
Identities = 41/179 (22%), Positives = 78/179 (43%)
Query: 1 MENEVVAAI--GPQSSGIAH--VISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQS 55
+E V A + Q+SG +S+ ++P++ + D + + FLRT
Sbjct: 86 IEKRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPP 145
Query: 56 DYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLG--DALSKK-------RAKISYK 106
Y+Q +++ ++ + +VI I D GR ++LG S+ RA +
Sbjct: 146 YYHQADVWLEMLSHFSYTKVIIIHSSDTDGR---AILGRFQTTSQTYYDDVDVRATVEMI 202
Query: 107 APFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATD 165
F P ++ + L +SRV++++ + + IF A+ MT +VWI T+
Sbjct: 203 VEFEP--KLTSFSEHLTYMKTAQSRVYLMYASTEDAQIIFRDARDHNMTQEGHVWIVTE 259
Score = 92 (37.4 bits), Expect = 5.1e-27, Sum P(3) = 5.1e-27
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 230 DSVWLVAHALDALL-NEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNF 288
DSV+++A A+ ++ NE T + PK D S +N ++ G++ Q L N
Sbjct: 288 DSVYVLASAIKEMISNE----TIAEAPK--DCGDSAVN------WESGKRLFQYLKTRNI 335
Query: 289 TGLSGEIRFDADKNLVNPAYDVLNI 313
TG +G++ FD + + + YDV+NI
Sbjct: 336 TGETGQVAFDDNGDRIYAGYDVINI 360
Score = 76 (31.8 bits), Expect = 2.3e-25, Sum P(3) = 2.3e-25
Identities = 25/101 (24%), Positives = 47/101 (46%)
Query: 273 FDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRI-GYWSNYSGLS 331
++ G++ Q L N TG +G++ FD + + + YDV+NI + + G +S + +
Sbjct: 320 WESGKRLFQYLKTRNITGETGQVAFDDNGDRIYAGYDVINIRENQKQHVVGKFSYDNMRA 379
Query: 332 VVAPEILYTKPPNSSSNRHLYSVIWPGEITATPRGWVFPNN 372
+ +I N S +IW G+ P G + P +
Sbjct: 380 KMRMKI------NDSE------IIWAGKQKRKPEGIMIPTH 408
>UNIPROTKB|Q38PU6 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9541 "Macaca
fascicularis" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GO:GO:0004971 GO:GO:0005234 HOVERGEN:HBG051839 HSSP:P19491
EMBL:DQ159931 ProteinModelPortal:Q38PU6 SMR:Q38PU6 PRIDE:Q38PU6
Uniprot:Q38PU6
Length = 894
Score = 184 (69.8 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 71/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 599 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 658
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 659 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 718
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 719 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALGNAV 778
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 779 NLAVLKLNEQGLLDKLKNKWWYDKGECGTGGCGSKDKTSALSLSNVAGVFYILVGGLGLA 838
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 839 MMVALIEF 846
Score = 148 (57.2 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 39/131 (29%), Positives = 73/131 (55%)
Query: 400 KGYCIDV-FEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ +E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 452 EGYCVDLAYEIAKHVR---IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 508
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F +G
Sbjct: 509 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFASIGV 566
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 567 SVVLFLVSRFS 577
Score = 104 (41.7 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 60/296 (20%), Positives = 122/296 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ +Y W + + ++ D + G + + + +A + +++ + S G +
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTAR---SVGNIKDVQEFR 203
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGM-TAGSYVWIATDWLPSVLDSTEPVD 178
++ + + + +++ + TI LG + G + +A +L E V
Sbjct: 204 RIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LERVM 261
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVW 233
N+ G + + P + + FI RW L +E N+P + S AL +D++
Sbjct: 262 HGGANIT-GFQIVNNENP---MVQQFIQRWVRLDEREFPEAKNAPLKYTS-AL-THDAIL 315
Query: 234 LVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSG 293
++A A L + D + G L ++ + G + L + G++G
Sbjct: 316 VIAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTG 368
Query: 294 EIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
I+FD N DV + +GSR+ GYW+ Y + + + + SS NR
Sbjct: 369 NIQFDTYGRRTNYTIDVYEMKVSGSRKAGYWNEYERFVPFSDQQI-SNDSASSENR 423
Score = 46 (21.3 bits), Expect = 1.0e-26, Sum P(4) = 1.0e-26
Identities = 9/31 (29%), Positives = 19/31 (61%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N +P+ +++
Sbjct: 843 LIEFCYKSRAESKRMKLTKNTQNFKPAPATN 873
>UNIPROTKB|Q5VSF9 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:AL929554 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882 Pfam:PF10562
HOGENOM:HOG000231491 HOVERGEN:HBG052638 UniGene:Hs.558334
HGNC:HGNC:4584 ChiTaRS:GRIN1 IPI:IPI00647309 SMR:Q5VSF9
STRING:Q5VSF9 Ensembl:ENST00000371555 Uniprot:Q5VSF9
Length = 922
Score = 238 (88.8 bits), Expect = 6.5e-26, Sum P(5) = 6.5e-26
Identities = 82/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 512 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 571
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 572 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 631
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 632 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 691
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 692 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 750
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++ +
Sbjct: 751 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDL 809
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 810 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 853
Score = 97 (39.2 bits), Expect = 6.5e-26, Sum P(5) = 6.5e-26
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 97 SKKRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTA 156
+K+ K F PG + +LL+ A +E+RV ++ + D T++ A L MT
Sbjct: 206 NKRGPKAEKVLQFDPGTKN--VTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTG 263
Query: 157 GSYVWI 162
YVW+
Sbjct: 264 SGYVWL 269
Score = 65 (27.9 bits), Expect = 6.5e-26, Sum P(5) = 6.5e-26
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAK 102
FLRT +Q +++ Y W +I + DD GR L L ++ +K
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESK 190
Score = 61 (26.5 bits), Expect = 6.5e-26, Sum P(5) = 6.5e-26
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 294 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 341
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 342 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 394
Score = 49 (22.3 bits), Expect = 6.5e-26, Sum P(5) = 6.5e-26
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 400 IIWPGGETEKPRGY 413
>UNIPROTKB|Q5R1P0 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0014069 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 KO:K05208 InterPro:IPR018882
Pfam:PF10562 EMBL:AB195993 EMBL:AB195994 EMBL:AB195995
RefSeq:NP_001008717.1 UniGene:Cfa.16224 ProteinModelPortal:Q5R1P0
SMR:Q5R1P0 STRING:Q5R1P0 PRIDE:Q5R1P0 GeneID:494007 KEGG:cfa:494007
CTD:2902 HOGENOM:HOG000231491 HOVERGEN:HBG052638 OrthoDB:EOG4CG07J
NextBio:20865536 Uniprot:Q5R1P0
Length = 943
Score = 238 (88.8 bits), Expect = 9.6e-26, Sum P(5) = 9.6e-26
Identities = 82/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 512 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 571
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 572 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 631
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 632 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 691
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 692 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 750
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++ +
Sbjct: 751 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDL 809
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 810 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 853
Score = 96 (38.9 bits), Expect = 9.6e-26, Sum P(5) = 9.6e-26
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 98 KKRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAG 157
K+ K F PG + +LL+ A +E+RV ++ + D T++ A L MT
Sbjct: 207 KRGPKAEKVLQFDPGTKN--VTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGS 264
Query: 158 SYVWI 162
YVW+
Sbjct: 265 GYVWL 269
Score = 65 (27.9 bits), Expect = 9.6e-26, Sum P(5) = 9.6e-26
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAK 102
FLRT +Q +++ Y W +I + DD GR L L ++ +K
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESK 190
Score = 61 (26.5 bits), Expect = 9.6e-26, Sum P(5) = 9.6e-26
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 294 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 341
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 342 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 394
Score = 49 (22.3 bits), Expect = 9.6e-26, Sum P(5) = 9.6e-26
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 400 IIWPGGETEKPRGY 413
>UNIPROTKB|E2R3A6 [details] [associations]
symbol:E2R3A6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018882
Pfam:PF10562 ProteinModelPortal:E2R3A6 Ensembl:ENSCAFT00000035191
Uniprot:E2R3A6
Length = 957
Score = 238 (88.8 bits), Expect = 1.1e-25, Sum P(5) = 1.1e-25
Identities = 82/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 510 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 569
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 570 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 629
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 630 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 689
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 690 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 748
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++ +
Sbjct: 749 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDL 807
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 808 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 851
Score = 96 (38.9 bits), Expect = 1.1e-25, Sum P(5) = 1.1e-25
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 98 KKRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAG 157
K+ K F PG + +LL+ A +E+RV ++ + D T++ A L MT
Sbjct: 207 KRGPKAEKVLQFDPGTKN--VTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGS 264
Query: 158 SYVWI 162
YVW+
Sbjct: 265 GYVWL 269
Score = 65 (27.9 bits), Expect = 1.1e-25, Sum P(5) = 1.1e-25
Identities = 15/54 (27%), Positives = 24/54 (44%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAK 102
FLRT +Q +++ Y W +I + DD GR L L ++ +K
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESK 190
Score = 61 (26.5 bits), Expect = 1.1e-25, Sum P(5) = 1.1e-25
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 294 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 341
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 342 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 394
Score = 49 (22.3 bits), Expect = 1.1e-25, Sum P(5) = 1.1e-25
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 400 IIWPGGETEKPRGY 413
>ZFIN|ZDB-GENE-020125-5 [details] [associations]
symbol:gria3a "glutamate receptor, ionotropic, AMPA
3a" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0004872 "receptor activity" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
HOVERGEN:HBG051839 KO:K05199 EMBL:AF525745 IPI:IPI00483360
RefSeq:NP_938153.1 UniGene:Dr.133590 ProteinModelPortal:Q71E61
SMR:Q71E61 GeneID:170452 KEGG:dre:170452 CTD:170452
InParanoid:Q71E61 NextBio:20797093 Uniprot:Q71E61
Length = 886
Score = 193 (73.0 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 73/248 (29%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP+ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 591 PPNDFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 650
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 651 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFVKTT 710
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 711 PDGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPV 770
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
S A+L+LSE G L K+ NKW EC S + S LSL + G+F I G+A
Sbjct: 771 SLAVLKLSEQGILDKLKNKWWYDKGECGTKDSVSKDKTSALSLSNVAGVFYILVGGLGLA 830
Query: 752 CFLALIFF 759
+AL+ F
Sbjct: 831 MTVALVEF 838
Score = 141 (54.7 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 35/128 (27%), Positives = 66/128 (51%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVALNKFDAAVGDITI 455
+GYC+D+ + + + G G R+P +N +V ++ + D AV +TI
Sbjct: 445 EGYCVDLASEIAKHVGIKYKLSIVADGKYGARDPETKTWNGMVGELVYGRADIAVAPLTI 504
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-AVV 513
R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +VV
Sbjct: 505 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVSVV 562
Query: 514 WILEHRFN 521
L RF+
Sbjct: 563 LFLVSRFS 570
Score = 94 (38.1 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 38/159 (23%), Positives = 71/159 (44%)
Query: 196 PDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVWLVAHALDALLNEGGKFT 250
PD+ + + F+ R + L +E +SP + S AL +D++ ++A A L +
Sbjct: 268 PDSPIVQQFLQRRERLDEREFPESRSSPLKYTS-AL-THDAILVIAEAFRYLRRQ----- 320
Query: 251 FSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDV 310
D + G L ++ + G + L + G++G I+FD+ N DV
Sbjct: 321 -RVDISRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTGNIQFDSFGRRSNYTVDV 378
Query: 311 LNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
+ G+R+IGYW+ + + + + T +S NR
Sbjct: 379 YEMKPGGARKIGYWNEFEKFVYIVEQQV-TNESSSVENR 416
Score = 42 (19.8 bits), Expect = 1.4e-25, Sum P(4) = 1.4e-25
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSS 832
L++F + E K + +N+ N +P+ S
Sbjct: 835 LVEFCYKSHQETKRLKLAKNAQNFKPAPPS 864
Score = 37 (18.1 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 8/40 (20%), Positives = 22/40 (55%)
Query: 49 FLRTTQSDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+++ +D Y+ + V +++ ++ G + ++I D YG
Sbjct: 435 YMQLEGNDRYEGYCVDLASEIAKHVGIKYKLSIVADGKYG 474
>UNIPROTKB|F1LPK4 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00948300
ProteinModelPortal:F1LPK4 Ensembl:ENSRNOT00000039491
ArrayExpress:F1LPK4 Uniprot:F1LPK4
Length = 920
Score = 185 (70.2 bits), Expect = 1.6e-25, Sum P(4) = 1.6e-25
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 442 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 499
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 500 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 557
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 558 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 617
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 618 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 664
Score = 148 (57.2 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 54/196 (27%), Positives = 82/196 (41%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 598 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 657
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 658 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 717
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 718 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG 777
Query: 708 DLQKIHNKW-LTYNEC 722
L K+ NKW EC
Sbjct: 778 LLDKLKNKWWYDKGEC 793
Score = 143 (55.4 bits), Expect = 1.6e-25, Sum P(4) = 1.6e-25
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 134 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYR 192
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 193 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 244
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 245 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTATIKYTSALTYDAV 303
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 304 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 355
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 356 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 401
Score = 94 (38.1 bits), Expect = 1.6e-25, Sum P(4) = 1.6e-25
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 689 DSPLAIDLSTAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLI 747
DS ++L A+L+LSE G L K+ NKW EC S + S LSL + G+F I
Sbjct: 799 DSKTPVNL--AVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYI 856
Query: 748 C----GIACFLALIFF 759
G+A +ALI F
Sbjct: 857 LVGGLGLAMLVALIEF 872
Score = 49 (22.3 bits), Expect = 1.6e-25, Sum P(4) = 1.6e-25
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N N PS S +
Sbjct: 869 LIEFCYKSRAEAKRMKVAKNPQNINPSSSQN 899
>UNIPROTKB|F1P2K1 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0018964 "propylene metabolic
process" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0021586 "pons maturation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0035176
"social behavior" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043278 "response to morphine"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] [GO:0060179 "male mating behavior" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0005509
GO:GO:0001975 GO:GO:0043524 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0006874 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0004972 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00819235
Ensembl:ENSGALT00000040367 Uniprot:F1P2K1
Length = 797
Score = 241 (89.9 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 83/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 425 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 484
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 485 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 544
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 545 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 604
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 605 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 663
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S AIL+ ENG ++ +
Sbjct: 664 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDL 722
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 723 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 766
Score = 98 (39.6 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 97 SKKRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTA 156
+K+ K F PG + SLL+ A +E+RV ++ + D T++ A L MT
Sbjct: 121 NKRGPKAEKVLQFDPGTKN--VTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNMTG 178
Query: 157 GSYVWI 162
YVW+
Sbjct: 179 SGYVWL 184
Score = 67 (28.6 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAK 102
FLRT +Q + +++ + W VI I DD GR L L ++ +K
Sbjct: 52 FLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEERESK 105
Score = 55 (24.4 bits), Expect = 2.4e-25, Sum P(4) = 2.4e-25
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ L K ++ P+ G + N + ++ G
Sbjct: 209 NGKNESA-HISDAVAVVAQAVHDLFE---KENITDPPR-----GCVGNTN---IWKTGPL 256
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ ++ G++G + F D D+ N Y ++N+ ++G Y+G +V+
Sbjct: 257 FKRVLMSSKYSEGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGSNVL 309
Score = 46 (21.3 bits), Expect = 2.0e-24, Sum P(4) = 2.0e-24
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 324 WSNYSGLSVVAPEILYTKPPNSSSN-RHLYSVIWPGEITATPRGW 367
++NYS +++ +++ N S+ + +IWPG T P+G+
Sbjct: 284 FANYSIMNLQNRKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGY 328
>UNIPROTKB|F1NKY9 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:AADN02026958 IPI:IPI00821429
Ensembl:ENSGALT00000014471 Uniprot:F1NKY9
Length = 856
Score = 241 (89.9 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 83/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 425 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 484
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 485 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 544
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 545 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 604
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 605 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 663
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S AIL+ ENG ++ +
Sbjct: 664 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDL 722
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 723 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 766
Score = 98 (39.6 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 97 SKKRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTA 156
+K+ K F PG + SLL+ A +E+RV ++ + D T++ A L MT
Sbjct: 121 NKRGPKAEKVLQFDPGTKN--VTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNMTG 178
Query: 157 GSYVWI 162
YVW+
Sbjct: 179 SGYVWL 184
Score = 67 (28.6 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAK 102
FLRT +Q + +++ + W VI I DD GR L L ++ +K
Sbjct: 52 FLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEERESK 105
Score = 55 (24.4 bits), Expect = 3.8e-25, Sum P(4) = 3.8e-25
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ L K ++ P+ G + N + ++ G
Sbjct: 209 NGKNESA-HISDAVAVVAQAVHDLFE---KENITDPPR-----GCVGNTN---IWKTGPL 256
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ ++ G++G + F D D+ N Y ++N+ ++G Y+G +V+
Sbjct: 257 FKRVLMSSKYSEGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGSNVL 309
Score = 46 (21.3 bits), Expect = 3.1e-24, Sum P(4) = 3.1e-24
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 324 WSNYSGLSVVAPEILYTKPPNSSSN-RHLYSVIWPGEITATPRGW 367
++NYS +++ +++ N S+ + +IWPG T P+G+
Sbjct: 284 FANYSIMNLQNRKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGY 328
>FB|FBgn0004619 [details] [associations]
symbol:GluRIA "Glutamate receptor IA" species:7227
"Drosophila melanogaster" [GO:0006812 "cation transport"
evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0005230
"extracellular ligand-gated ion channel activity" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0016021 "integral
to membrane" evidence=NAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;NAS] InterPro:IPR001320 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094
EMBL:AE014296 GO:GO:0030054 GO:GO:0045211 GO:GO:0006812
InterPro:IPR001828 EMBL:M97192 EMBL:BT003218 EMBL:BT050435
PIR:A46421 RefSeq:NP_476855.1 UniGene:Dm.6460
ProteinModelPortal:Q03445 SMR:Q03445 STRING:Q03445 PaxDb:Q03445
EnsemblMetazoa:FBtr0076982 GeneID:38742 KEGG:dme:Dmel_CG8442
CTD:38742 FlyBase:FBgn0004619 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 InParanoid:Q03445 KO:K05313
OMA:EWRIVRR OrthoDB:EOG4WM38M PhylomeDB:Q03445 GenomeRNAi:38742
NextBio:810146 Bgee:Q03445 GermOnline:CG8442 GO:GO:0008328
GO:GO:0004971 GO:GO:0005234 Uniprot:Q03445
Length = 991
Score = 208 (78.3 bits), Expect = 5.1e-25, Sum P(4) = 5.1e-25
Identities = 68/250 (27%), Positives = 115/250 (46%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ ++ FW+S + + T S+ GR SSYTA+L + LTV
Sbjct: 674 PPNEFTMLNSFWYSLAAFMQQGCDITPPSIAGRIAAAVWWFFTIILISSYTANLAAFLTV 733
Query: 585 QQLTSQIEGIDSLISSTEP-IGVQDGSFAWNYLVDELKIAESRLVKLKNMEE------YS 637
+++ + I+ + L T+ G W + +++ + N + Y
Sbjct: 734 ERMVAPIKTPEDLTMQTDVNYGTLLYGSTWEFFRRSQIGLHNKMWEYMNANQHHSVHTYD 793
Query: 638 IALARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLS 697
+ R + G A++ E P E ++ C+ VG+ G+G A SPL L+
Sbjct: 794 EGIRRVRQSKGKYALLVESPKNEYVNARPPCDTMKVGRNIDTKGFGVATPIGSPLRKRLN 853
Query: 698 TAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLF--LICGI--AC 752
A+L L ENG+L +I NKW EC++D + + LSL + G++ LI G+ A
Sbjct: 854 EAVLTLKENGELLRIRNKWWFDKTECNLDQETSTP--NELSLSNVAGIYYILIGGLLLAV 911
Query: 753 FLALIFFFCR 762
+A++ FFCR
Sbjct: 912 IVAIMEFFCR 921
Score = 141 (54.7 bits), Expect = 5.1e-25, Sum P(4) = 5.1e-25
Identities = 56/237 (23%), Positives = 110/237 (46%)
Query: 273 FDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGS-RRIGYWSNYSGLS 331
++ G++ + L ++ GLSGEIRFD D +N V+ + + +++ W + +GL
Sbjct: 394 WEQGEKISRVLRKVEIDGLSGEIRFDEDGRRINYTLHVVEMSVNSTLQQVAEWRDDAGL- 452
Query: 332 VVAPEILYTKPPNSSSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNE-FV 390
P L++ SSS S G+ V P +++ + +Y E V
Sbjct: 453 --LP--LHSHNYASSSRSASAST---GDYDRNHTYIVSSLLEEPY-LSL-KQYTYGESLV 503
Query: 391 AKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI----YNDIVQQVALNK 445
D+ +GYC D+ + L + GN G N ++ +V ++ +
Sbjct: 504 GNDR----FEGYCKDLADMLAAQLGIKYEIRLVQDGNYGAENQYAPGGWDGMVGELIRKE 559
Query: 446 FDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSP--WAFLKPFTIPMWL 500
D A+ +TI R +++DF++P+M G+ ++ + +K +P ++FL P + +W+
Sbjct: 560 ADIAISAMTITAERERVIDFSKPFMTLGISIMIK-KPVKQTPGVFSFLNPLSQEIWI 615
Score = 77 (32.2 bits), Expect = 5.1e-25, Sum P(4) = 5.1e-25
Identities = 21/80 (26%), Positives = 38/80 (47%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLT-SLQYPYFLRTTQSDYYQMHAV 63
++ A+ P S H S N +P ++ + L S F + + DY+Q A+
Sbjct: 105 MLGAVSPDSFDTLHSYS---NTFQMPFVTPWFPEKVLAPSSGLLDFAISMRPDYHQ--AI 159
Query: 64 ADLVEYYGWREVIAIFVDDD 83
D ++YYGW+ +I ++ D
Sbjct: 160 IDTIQYYGWQSIIYLYDSHD 179
Score = 40 (19.1 bits), Expect = 5.1e-25, Sum P(4) = 5.1e-25
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 216 NSPSGFNSYALYAYDSVWLVAHALDALLNE 245
NS ++ A YD+V+++ A + +L +
Sbjct: 320 NSLPAISAQAALMYDAVFVLVEAFNRILRK 349
>UNIPROTKB|F1P2J8 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0005509
"calcium ion binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0007585 "respiratory gaseous
exchange" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008344 "adult locomotory behavior" evidence=IEA] [GO:0008355
"olfactory learning" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0018964 "propylene metabolic
process" evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0021586 "pons maturation" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0035176
"social behavior" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0043278 "response to morphine"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043576 "regulation of respiratory
gaseous exchange" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060134 "prepulse inhibition"
evidence=IEA] [GO:0060179 "male mating behavior" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0043278 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0005509
GO:GO:0001975 GO:GO:0043524 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0006874 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0004972 InterPro:IPR018882
Pfam:PF10562 OMA:VYRSAAM EMBL:AADN02026958 IPI:IPI00639787
ProteinModelPortal:F1P2J8 Ensembl:ENSGALT00000040370 Uniprot:F1P2J8
Length = 901
Score = 241 (89.9 bits), Expect = 5.2e-25, Sum P(4) = 5.2e-25
Identities = 83/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 425 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 484
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 485 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 544
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 545 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 604
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 605 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 663
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S AIL+ ENG ++ +
Sbjct: 664 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHENGFMEDL 722
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 723 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 766
Score = 98 (39.6 bits), Expect = 5.2e-25, Sum P(4) = 5.2e-25
Identities = 21/66 (31%), Positives = 33/66 (50%)
Query: 97 SKKRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTA 156
+K+ K F PG + SLL+ A +E+RV ++ + D T++ A L MT
Sbjct: 121 NKRGPKAEKVLQFDPGTKN--VTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNMTG 178
Query: 157 GSYVWI 162
YVW+
Sbjct: 179 SGYVWL 184
Score = 67 (28.6 bits), Expect = 5.2e-25, Sum P(4) = 5.2e-25
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAK 102
FLRT +Q + +++ + W VI I DD GR L L ++ +K
Sbjct: 52 FLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKLETLLEERESK 105
Score = 55 (24.4 bits), Expect = 5.2e-25, Sum P(4) = 5.2e-25
Identities = 28/118 (23%), Positives = 56/118 (47%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ L K ++ P+ G + N + ++ G
Sbjct: 209 NGKNESA-HISDAVAVVAQAVHDLFE---KENITDPPR-----GCVGNTN---IWKTGPL 256
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ ++ G++G + F D D+ N Y ++N+ ++G Y+G +V+
Sbjct: 257 FKRVLMSSKYSEGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGSNVL 309
Score = 46 (21.3 bits), Expect = 4.3e-24, Sum P(4) = 4.3e-24
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 324 WSNYSGLSVVAPEILYTKPPNSSSN-RHLYSVIWPGEITATPRGW 367
++NYS +++ +++ N S+ + +IWPG T P+G+
Sbjct: 284 FANYSIMNLQNRKLVQVGIYNGSNVLTNDRKIIWPGGETEKPQGY 328
>UNIPROTKB|B4JHV0 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7222 "Drosophila grimshawi" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH916369 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_001989796.1 ProteinModelPortal:B4JHV0 STRING:B4JHV0
EnsemblMetazoa:FBtr0154407 GeneID:6563892 KEGG:dgr:Dgri_GH18993
FlyBase:FBgn0126460 InParanoid:B4JHV0 OMA:WLEMLSH Uniprot:B4JHV0
Length = 982
Score = 236 (88.1 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 79/348 (22%), Positives = 163/348 (46%)
Query: 421 NYIMYGNGKRNPI---YNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVV 477
+YI+ N + + ++ ++ + D V +TI R + ++F++P+ G+ ++
Sbjct: 491 HYILRNNSGAMTLRKEWTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITIL 550
Query: 478 APVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF---NNEFRGPPS 529
S+ +FL+PF+ +W++ V V+++L+ RF +++ +
Sbjct: 551 EKKPSRSSTLVSFLQPFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKA 610
Query: 530 QQLVTIFWFSFSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQL 587
L + WF++ + S E T S R +SYTA+L + L +++
Sbjct: 611 LNLSSAVWFAWGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERP 670
Query: 588 TSQIEGI-DSLISST-EPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALAR 642
+++ GI D+ + +T E + GS Y +++++ R ++ N A+
Sbjct: 671 KTKLSGINDARLRNTMENLTCATVKGSSVDMYFRRQVELSNMYRTMESNNYVTAEQAIQD 730
Query: 643 GPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
KG +A I D +E SK +CE T G+ F +SG+G Q+ SP ++ AIL+
Sbjct: 731 VKKGKLMAFIWDS-SRLEYEASK-DCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILE 788
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGI 750
E+G ++K+ +W+ + + + + L LK+ G+F++ G+
Sbjct: 789 FHESGFMEKLDKQWIFHGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 836
Score = 107 (42.7 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 41/179 (22%), Positives = 76/179 (42%)
Query: 1 MENEVVAAI--GPQSSGIAH--VISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQS 55
+E V A + Q+SG +S+ ++P++ + D + + FLRT
Sbjct: 92 IEKRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPP 151
Query: 56 DYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLG--DALSKK-------RAKISYK 106
Y+Q +++ ++ + +VI I D GR ++LG S+ RA +
Sbjct: 152 YYHQADVWLEMLSHFLYTKVIIIHSSDTDGR---AILGRFQTTSQTYYDDVDVRATVELI 208
Query: 107 APFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATD 165
F P + L+ +SRV++++ + + IF A MT +VWI T+
Sbjct: 209 VEFEP--KLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 265
Score = 100 (40.3 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 30/134 (22%), Positives = 66/134 (49%)
Query: 400 KGYCIDVF-EAAVNL-LPYPV---PH----NYIMYGNGKRNPI---YNDIVQQVALNKFD 447
+GYCID+ E + + Y + P +YI+ N + + ++ ++ + D
Sbjct: 461 RGYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNNSGAMTLRKEWTGLIGELVNERAD 520
Query: 448 AAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFL 507
V +TI R + ++F++P+ G+ ++ S+ +FL+PF+ +W++
Sbjct: 521 MIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 580
Query: 508 FVGAVVWILEHRFN 521
V V+++L+ RF+
Sbjct: 581 VVALVLYLLD-RFS 593
Score = 93 (37.8 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 60/254 (23%), Positives = 109/254 (42%)
Query: 88 GISVLGDALSKKRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFS 147
GIS A S K +S+ P ++ + L + ++ + ++V ++H + G I
Sbjct: 128 GISSRDAAFSDKNIHVSFLRTVPPYYHQADV-WLEMLSHFLYTKVIIIHSSDTDGRAILG 186
Query: 148 VAKSLGMT------AGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGVVALRH-HTPDTDL 200
++ T + V + ++ P + TE + ID M Q V L + T D +
Sbjct: 187 RFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHL-ID-MKTAQSRVYLMYASTEDAQV 244
Query: 201 ------KKNFISR---W---KNLKYKENSPSGFNSYAL-YAY-------DSVWLVAHALD 240
+ N W + + N+P G L +A+ DSV+++A A+
Sbjct: 245 IFRDAGEYNMTGEGHVWIVTEQALHANNTPDGVLGLQLEHAHSDKGHIRDSVYVLASAIK 304
Query: 241 ALL-NEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDA 299
++ NE T + PK D S +N ++ G++ Q L N TG +G++ FD
Sbjct: 305 EMISNE----TIAEAPK--DCGDSAVN------WESGKRLFQYLKSRNITGETGQVAFDD 352
Query: 300 DKNLVNPAYDVLNI 313
+ + + YDV+NI
Sbjct: 353 NGDRIYAGYDVINI 366
Score = 75 (31.5 bits), Expect = 1.0e-24, Sum P(3) = 1.0e-24
Identities = 26/101 (25%), Positives = 45/101 (44%)
Query: 273 FDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRI-GYWSNYSGLS 331
++ G++ Q L N TG +G++ FD + + + YDV+NI + + G +S S
Sbjct: 326 WESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKQHVVGKFSYDSPRG 385
Query: 332 VVAPEILYTKPPNSSSNRHLYSVIWPGEITATPRGWVFPNN 372
+ I N S +IW G+ P G + P +
Sbjct: 386 KMRMRI------NDSE------IIWGGKQKRKPEGIMIPTH 414
Score = 41 (19.5 bits), Expect = 7.3e-15, Sum P(2) = 7.3e-15
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNF 288
WL+ A + + T S++P ++ G + N D + F T+ +NF
Sbjct: 9 WLLCGAAIVNVLVAQRHTASDNPSTYNIGGVLSNS------DSEEHFRTTIAHLNF 58
>UNIPROTKB|E7EMV5 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC010613 EMBL:AC025156 EMBL:AC091960
EMBL:AC091962 HGNC:HGNC:4571 IPI:IPI00977433
ProteinModelPortal:E7EMV5 SMR:E7EMV5 Ensembl:ENST00000521843
ArrayExpress:E7EMV5 Bgee:E7EMV5 Uniprot:E7EMV5
Length = 839
Score = 173 (66.0 bits), Expect = 1.6e-24, Sum P(4) = 1.6e-24
Identities = 60/201 (29%), Positives = 91/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVK 629
SSYTA+L + LTV+++ S IE + L TE G ++ GS + ++ + E
Sbjct: 561 SSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTY 620
Query: 630 LKNMEEYSIA------LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWG 683
+K+ E + R K G A + E E + C+ VG G+G
Sbjct: 621 MKSAEPSVFVRTTEEGMIRVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYG 680
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFW 742
A + S L ++ A+L+L+E G L K+ NKW EC + S LSL +
Sbjct: 681 IATPKGSALRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVA 740
Query: 743 GLFLIC----GIACFLALIFF 759
G+F I G+A +ALI F
Sbjct: 741 GVFYILIGGLGLAMLVALIEF 761
Score = 147 (56.8 bits), Expect = 1.6e-24, Sum P(4) = 1.6e-24
Identities = 38/141 (26%), Positives = 71/141 (50%)
Query: 387 NEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVA 442
N+F D+ +GYC+++ + Y + G G R+P +N +V ++
Sbjct: 358 NQFEGNDR----YEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELV 413
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLV 501
+ D AV +TI R +++DF++P+M G+ +++ QK K ++FL P +W+
Sbjct: 414 YGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMC 473
Query: 502 TGGFFLFVG-AVVWILEHRFN 521
F ++G +VV L RF+
Sbjct: 474 I--VFAYIGVSVVLFLVSRFS 492
Score = 85 (35.0 bits), Expect = 1.6e-24, Sum P(4) = 1.6e-24
Identities = 40/162 (24%), Positives = 66/162 (40%)
Query: 198 TD-LKKNFISRWKNLKYKENSPSGFN--SY-ALYAYDSVWLVAHALDALLNEGGKFTFSN 253
TD + + +WKN ++++ + Y + YD V ++A A +L + + S
Sbjct: 190 TDTIPAKIMQQWKNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRRQ--RIDISR 247
Query: 254 DPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLN 312
D L++ V G G + L ++ F GL+G ++F+ N V+
Sbjct: 248 RGNAGDC------LANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIE 301
Query: 313 IGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSV 354
+ G R+IGYW N V A NSS Y V
Sbjct: 302 MKHDGIRKIGYW-NEDDKFVPAATDAQAGGDNSSVQNRTYIV 342
Score = 55 (24.4 bits), Expect = 1.6e-24, Sum P(4) = 1.6e-24
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P TS Q+ LR D A+ ++++Y W++ + I+ D D G + + + D ++
Sbjct: 45 PVDTSNQFVLQLRPELQD-----ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAE 98
Query: 99 KRAKIS 104
K +++
Sbjct: 99 KNWQVT 104
>UNIPROTKB|F5H470 [details] [associations]
symbol:GRIA3 "Glutamate receptor 3" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AL356213
EMBL:AL035426 EMBL:AL590139 EMBL:Z83848 EMBL:Z82899 HGNC:HGNC:4573
ChiTaRS:GRIA3 IPI:IPI01012695 ProteinModelPortal:F5H470 SMR:F5H470
Ensembl:ENST00000542149 ArrayExpress:F5H470 Bgee:F5H470
Uniprot:F5H470
Length = 824
Score = 160 (61.4 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 62/224 (27%), Positives = 94/224 (41%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 599 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 658
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 659 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 718
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 719 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNAV 778
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLK 739
+ A+L+L+E G L K+ NKW EC + GG S+ + K
Sbjct: 779 NLAVLKLNEQGLLDKLKNKWWYDKGECG-----SGGGDSKNACK 817
Score = 153 (58.9 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 400 KGYCIDV-FEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ +E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 452 EGYCVDLAYEIAKHVR---IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 508
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G
Sbjct: 509 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGV 566
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 567 SVVLFLVSRFS 577
Score = 104 (41.7 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 60/296 (20%), Positives = 122/296 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ +Y W + + ++ D + G + + + +A + +++ + S G +
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTAR---SVGNIKDVQEFR 203
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGM-TAGSYVWIATDWLPSVLDSTEPVD 178
++ + + + +++ + TI LG + G + +A +L E V
Sbjct: 204 RIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LERVM 261
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVW 233
N+ G + + P + + FI RW L +E N+P + S AL +D++
Sbjct: 262 HGGANIT-GFQIVNNENP---MVQQFIQRWVRLDEREFPEAKNAPLKYTS-AL-THDAIL 315
Query: 234 LVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSG 293
++A A L + D + G L ++ + G + L + G++G
Sbjct: 316 VIAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTG 368
Query: 294 EIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
I+FD N DV + +GSR+ GYW+ Y + + + + SS NR
Sbjct: 369 NIQFDTYGRRTNYTIDVYEMKVSGSRKAGYWNEYERFVPFSDQQI-SNDSASSENR 423
>UNIPROTKB|F1RYR0 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=IEA]
[GO:0048172 "regulation of short-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0006886 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0005622 GO:GO:0006874
GO:GO:0019228 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 OMA:VNGQWNG GeneTree:ENSGT00590000083056
EMBL:AEMK01188348 EMBL:CU062538 EMBL:CU407189 EMBL:CU457396
EMBL:CU928568 Ensembl:ENSSSCT00000004819 Uniprot:F1RYR0
Length = 872
Score = 160 (61.4 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 59/232 (25%), Positives = 104/232 (44%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYG-NGKRNPIYNDIVQQVALNKFDAAVGDITI 455
+GYCID+ +L + + YG N +N +V+++ +K D AV + I
Sbjct: 423 EGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAI 482
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ ++FL P + +W+ +L V V++
Sbjct: 483 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 542
Query: 515 ILEHRFNN-EFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSS--LGRXXX 560
++ RF+ E+ P P +V T+ FWF + + R
Sbjct: 543 VIA-RFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQEGPELMPKALFLRIVG 601
Query: 561 XXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 602 GIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGA 653
Score = 158 (60.7 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 55/203 (27%), Positives = 92/203 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVK 629
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+ + ++ +
Sbjct: 613 SSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAF 672
Query: 630 LKNMEEYSIALARGPKG-----GGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGF 684
+ + + S+ + +G A + E IE F+++ NC +G G+G
Sbjct: 673 MSSRRQ-SVLVKSNEEGIQRVLTSDYAFLMESTTIE-FVTQRNCNLTQIGGLIDSKGYGV 730
Query: 685 AFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGL 744
SP ++ AILQL E G L + KW N C + S S L +++ G+
Sbjct: 731 GTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEEESKE---ASALGVQNIGGI 787
Query: 745 FLICGIACFLALIFFFCRVCGQF 767
F++ +A L L F G+F
Sbjct: 788 FIV--LAAGLVLSVFVA--VGEF 806
Score = 99 (39.9 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 79/337 (23%), Positives = 134/337 (39%)
Query: 6 VAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VAAI GP S A+ + + N L VP + S F + D+ + A+
Sbjct: 66 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQV--SDNKDSFYVSLYPDFSSLSRAI 123
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV+++ W+ V ++ DD G + L A S+ ++ + P ++ A L
Sbjct: 124 LDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKE 180
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
E V + + + I A ++GM Y +I T LD EP +N
Sbjct: 181 MKRGKEFHV-IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALD-VEPYRYSGVN 238
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L +T +T + + I +W + L+ SG + A YD+V
Sbjct: 239 MT-GFRIL--NTENTQVS-SIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAV---- 290
Query: 237 HALDALLNEGGKFTFSN-DPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
H + + + + T S+ H SL + + + L R+ F +G +
Sbjct: 291 HVVSVGVQQFPQMTVSSLQCNRHKPWRFGTRFMSL-IKEAHWEGLTG--RITFNKTNG-L 346
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
R D D DV+++ G +IG W SGL++
Sbjct: 347 RTDFD-------LDVISLKEEGLEKIGTWDPASGLNM 376
>UNIPROTKB|B4LZB5 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7244 "Drosophila virilis" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH940650 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562
RefSeq:XP_002054630.1 ProteinModelPortal:B4LZB5 STRING:B4LZB5
EnsemblMetazoa:FBtr0240485 GeneID:6630672 KEGG:dvi:Dvir_GJ24560
FlyBase:FBgn0211640 InParanoid:B4LZB5 OMA:HVANELH Uniprot:B4LZB5
Length = 984
Score = 230 (86.0 bits), Expect = 2.9e-24, Sum P(3) = 2.9e-24
Identities = 75/332 (22%), Positives = 156/332 (46%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKP 493
+ ++ ++ + D V +TI R + ++F++P+ G+ ++ S+ +FL+P
Sbjct: 509 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQP 568
Query: 494 FTIPMWLVTGGFFLFVGAVVWILEH-----RF---NNEFRGPPSQQLVTIFWFSFSTMFF 545
F+ +W++ V V+++L+ RF +++ + L + WF++ +
Sbjct: 569 FSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLN 628
Query: 546 SH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI-DSLISST- 601
S E T S R +SYTA+L + L +++ +++ GI D+ + +T
Sbjct: 629 SGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 688
Query: 602 EPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAIVDELPY 658
E + GS Y +++++ R ++ N A+ KG +A I D
Sbjct: 689 ENLTCATVKGSSVDMYFRRQVELSNMYRTMESNNYVTAEQAIQDVKKGKLMAFIWDS-SR 747
Query: 659 IELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT 718
+E SK +CE T G+ F +SG+G Q+ SP ++ IL+ E+G ++K+ +W+
Sbjct: 748 LEYEASK-DCELVTAGELFGRSGYGVGLQKGSPWTDAVTLTILEFHESGFMEKLDKQWIF 806
Query: 719 YNECSMDLSPADGGGSRLSLKSFWGLFLICGI 750
+ + + + L LK+ G+F++ G+
Sbjct: 807 HGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 838
Score = 109 (43.4 bits), Expect = 2.9e-24, Sum P(3) = 2.9e-24
Identities = 42/179 (23%), Positives = 76/179 (42%)
Query: 1 MENEVVAAI--GPQSSGIAH--VISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQS 55
+E V A + Q+SG +S+ ++P++ + D + + FLRT
Sbjct: 94 IEKRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPP 153
Query: 56 DYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLG--DALSKK-------RAKISYK 106
Y+Q +L+ ++ + +VI I D GR ++LG S+ RA +
Sbjct: 154 YYHQADVWLELLSHFLYTKVIIIHSSDTDGR---AILGRFQTTSQTYYDDVDVRATVELI 210
Query: 107 APFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATD 165
F P + L+ +SRV++++ + + IF A MT +VWI T+
Sbjct: 211 VEFEP--KLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 267
Score = 98 (39.6 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 30/134 (22%), Positives = 66/134 (49%)
Query: 400 KGYCIDVF-EAAVNL-LPYPV---PH----NYIMYGNGKRNPI---YNDIVQQVALNKFD 447
+GYCID+ E + + Y + P +YI+ N + + ++ ++ + D
Sbjct: 463 RGYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNNTGAMTLRKEWTGLIGELVNERAD 522
Query: 448 AAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFL 507
V +TI R + ++F++P+ G+ ++ S+ +FL+PF+ +W++
Sbjct: 523 MIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 582
Query: 508 FVGAVVWILEHRFN 521
V V+++L+ RF+
Sbjct: 583 VVALVLYLLD-RFS 595
Score = 94 (38.1 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 60/254 (23%), Positives = 109/254 (42%)
Query: 88 GISVLGDALSKKRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFS 147
GIS A S K +S+ P ++ + L+ ++ + ++V ++H + G I
Sbjct: 130 GISSRDAAFSDKNIHVSFLRTVPPYYHQADVWLELL-SHFLYTKVIIIHSSDTDGRAILG 188
Query: 148 VAKSLGMT------AGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGVVALRH-HTPDTDL 200
++ T + V + ++ P + TE + ID M Q V L + T D +
Sbjct: 189 RFQTTSQTYYDDVDVRATVELIVEFEPKLESFTEHL-ID-MKTAQSRVYLMYASTEDAQV 246
Query: 201 ------KKNFISR---W---KNLKYKENSPSGFNSYAL-YAY-------DSVWLVAHALD 240
+ N W + + N+P G L +A+ DSV+++A A+
Sbjct: 247 IFRDAGEYNMTGEGHVWIVTEQALHANNTPDGVLGLQLEHAHSDKGHIRDSVYVLASAIK 306
Query: 241 ALL-NEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDA 299
++ NE T + PK D S +N ++ G++ Q L N TG +G++ FD
Sbjct: 307 EMISNE----TIAEAPK--DCGDSAVN------WESGKRLFQYLKSRNITGETGQVAFDD 354
Query: 300 DKNLVNPAYDVLNI 313
+ + + YDV+NI
Sbjct: 355 NGDRIYAGYDVINI 368
Score = 75 (31.5 bits), Expect = 2.9e-24, Sum P(3) = 2.9e-24
Identities = 26/101 (25%), Positives = 45/101 (44%)
Query: 273 FDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRR-IGYWSNYSGLS 331
++ G++ Q L N TG +G++ FD + + + YDV+NI + +G +S Y L
Sbjct: 328 WESGKRLFQYLKSRNITGETGQVAFDDNGDRIYAGYDVINIREHQKQHLVGKFS-YDSLR 386
Query: 332 VVAPEILYTKPPNSSSNRHLYSVIWPGEITATPRGWVFPNN 372
+ N S +IW G+ P G + P +
Sbjct: 387 AKMRMRI-----NDSE------IIWGGKQKRKPEGIMIPTH 416
Score = 39 (18.8 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 21/89 (23%), Positives = 35/89 (39%)
Query: 225 ALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFD---GGQQFLQ 281
A +AY + A ++ L + T S++P ++ G + N S F F Q
Sbjct: 3 AAFAYRWLLCAAGIVNVLPIGAQRHTASDNPSTYNIGGVLSNSESELHFHTTIAHLNFDQ 62
Query: 282 TLLRMNFTGLSGEIRFDADKNLVNPAYDV 310
+ T IR D KN + ++V
Sbjct: 63 QYVPRKVTYYDKTIRMD--KNPIKTVFNV 89
>ZFIN|ZDB-GENE-051202-2 [details] [associations]
symbol:grin1b "glutamate receptor, ionotropic,
N-methyl D-aspartate 1b" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-051202-2
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 KO:K05208
InterPro:IPR018882 Pfam:PF10562 HOGENOM:HOG000231491
HOVERGEN:HBG052638 OMA:VYRSAAM EMBL:BX276128 EMBL:AL831768
IPI:IPI00616850 RefSeq:NP_001137603.1 UniGene:Dr.83363 SMR:Q6ZM67
Ensembl:ENSDART00000034849 GeneID:100005675 KEGG:dre:100005675
CTD:100005675 InParanoid:Q6ZM67 NextBio:20786787 Uniprot:Q6ZM67
Length = 937
Score = 237 (88.5 bits), Expect = 5.8e-24, Sum P(4) = 5.8e-24
Identities = 83/349 (23%), Positives = 161/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 507 NNSNKKEWNGMMGELLSGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 566
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 567 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 626
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 627 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 686
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 687 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 745
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S AIL ENG ++ +
Sbjct: 746 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHENGFMEDL 804
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 805 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 848
Score = 87 (35.7 bits), Expect = 5.8e-24, Sum P(4) = 5.8e-24
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 118 INSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
+ +LL A +E+RV ++ + D I+ VA+ L MT YVW+
Sbjct: 221 LTALLQEAKELEARVIILSASEDEAAAIYKVARQLNMTGSGYVWL 265
Score = 64 (27.6 bits), Expect = 5.8e-24, Sum P(4) = 5.8e-24
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAK 102
FLRT +Q D++ + W +I I DD GR L L ++ K
Sbjct: 134 FLRTVPPYSHQAQVWFDMMREFQWNHIILIVSDDHEGRAAQKRLETLLEERETK 187
Score = 64 (27.6 bits), Expect = 5.8e-24, Sum P(4) = 5.8e-24
Identities = 30/116 (25%), Positives = 53/116 (45%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + YD+V +VA ++ L K + P+ G + N + ++ G
Sbjct: 290 NGKNESA-HIYDAVAVVAQSIQELFE---KENITEPPR-----GCVGNTN---IWKTGPL 337
Query: 279 FLQTLLRMNFT-GLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + GL+G + F+ D + Y +LN T ++G Y+G VV
Sbjct: 338 FKRVLMSSKYPDGLTGRVEFNDDGDRRFAHYSILNYQKTRLVQVGV---YNGSQVV 390
Score = 53 (23.7 bits), Expect = 7.6e-23, Sum P(4) = 7.6e-23
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 317 GSRRIGYWS--NYSGLSVVAPEILYTKPPNSSSNRHLYSVIWPGEITATPRGW 367
G RR ++S NY +V + ++ R +IWPG T P+G+
Sbjct: 361 GDRRFAHYSILNYQKTRLVQVGVYNGSQVVMNAQR---KIIWPGGETEKPKGY 410
>ZFIN|ZDB-GENE-051202-1 [details] [associations]
symbol:grin1a "glutamate receptor, ionotropic,
N-methyl D-aspartate 1a" species:7955 "Danio rerio" [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-051202-1
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 InterPro:IPR018882
Pfam:PF10562 EMBL:BX005379 IPI:IPI00920462
Ensembl:ENSDART00000129744 Uniprot:E7F101
Length = 966
Score = 239 (89.2 bits), Expect = 5.8e-24, Sum P(5) = 5.8e-24
Identities = 84/349 (24%), Positives = 162/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 507 NNSNKKEWNGMMGELLGGLADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 566
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 567 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 626
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 627 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 686
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 687 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 745
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S AIL ENG ++ +
Sbjct: 746 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHENGFMEDL 804
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GIA + LIF
Sbjct: 805 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIAAGIFLIF 848
Score = 79 (32.9 bits), Expect = 5.8e-24, Sum P(5) = 5.8e-24
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 118 INSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
+ +LL+ A +E+RV ++ + + ++ A+ L MT YVW+
Sbjct: 221 LTALLLEAKELEARVIILSASEEDAAAVYKTARFLNMTGSGYVWL 265
Score = 72 (30.4 bits), Expect = 5.8e-24, Sum P(5) = 5.8e-24
Identities = 17/54 (31%), Positives = 24/54 (44%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAK 102
FLRT +Q H D++ + W +I I DD GR L L ++ K
Sbjct: 134 FLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETLLEERETK 187
Score = 54 (24.1 bits), Expect = 5.8e-24, Sum P(5) = 5.8e-24
Identities = 16/68 (23%), Positives = 32/68 (47%)
Query: 267 LSSLRVFDGGQQFLQTLLRMNFT-GLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWS 325
+ + ++ G F + L+ + GL+G + F+ D + Y +LN + ++G
Sbjct: 326 VGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDDGDRKYAHYSILNYQKSRLIQVGI-- 383
Query: 326 NYSGLSVV 333
Y+G VV
Sbjct: 384 -YNGTQVV 390
Score = 48 (22.0 bits), Expect = 5.8e-24, Sum P(5) = 5.8e-24
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 397 IIWPGGETERPRGF 410
>UNIPROTKB|G3N3K3 [details] [associations]
symbol:GRIN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060179 "male mating behavior" evidence=IEA]
[GO:0060134 "prepulse inhibition" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0051963 "regulation of synapse assembly"
evidence=IEA] [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0043576
"regulation of respiratory gaseous exchange" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043278 "response to morphine" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0021987 "cerebral cortex development" evidence=IEA] [GO:0021586
"pons maturation" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0018964 "propylene metabolic process"
evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=IEA] [GO:0016594 "glycine binding"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0008542 "visual
learning" evidence=IEA] [GO:0008355 "olfactory learning"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008021 "synaptic vesicle" evidence=IEA] [GO:0007616 "long-term
memory" evidence=IEA] [GO:0007585 "respiratory gaseous exchange"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0001661 "conditioned taste aversion"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0021987 GO:GO:0008355 GO:GO:0014069 GO:GO:0009986
GO:GO:0043278 GO:GO:0019233 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0045944 GO:GO:0008344
GO:GO:0001967 GO:GO:0008542 GO:GO:0007616 GO:GO:0005509
GO:GO:0060079 GO:GO:0001975 GO:GO:0043524 GO:GO:0060134
GO:GO:0035249 GO:GO:0030288 GO:GO:0043065 GO:GO:0050770
GO:GO:0048814 GO:GO:0007585 GO:GO:0006874 GO:GO:0001661
GO:GO:0051963 GO:GO:0035176 GO:GO:0048169 InterPro:IPR001828
GO:GO:0043576 GO:GO:0017146 GO:GO:0005234 GO:GO:0016594
GeneTree:ENSGT00700000104113 GO:GO:0060179 GO:GO:0004972
InterPro:IPR018882 Pfam:PF10562 OMA:VYRSAAM GO:GO:0021586
EMBL:DAAA02032413 EMBL:DAAA02032414 EMBL:DAAA02032415
Ensembl:ENSBTAT00000065439 Uniprot:G3N3K3
Length = 931
Score = 217 (81.4 bits), Expect = 1.5e-23, Sum P(5) = 1.5e-23
Identities = 90/411 (21%), Positives = 179/411 (43%)
Query: 369 FPNNGMPLRIAV---PNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMY 425
F NG P++ + PN S + P G+C+D+ + + + +
Sbjct: 445 FTVNGDPVKKVICTGPNDTSPGS--PRHTVPQCCYGFCVDLLIKLARTMNFTYEVHLVAD 502
Query: 426 G--------NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVV 477
G N +N ++ ++ + D V +TI R + ++F++P+ GL ++
Sbjct: 503 GKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTIL 562
Query: 478 APVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFW 537
+ +S+ +F++PF +WL+ L + + N+E + L + W
Sbjct: 563 VKKEIPRSTLDSFMQPFQSTLWLLRP---LRPRSPFG--RFKVNSEEEEEDALTLSSAMW 617
Query: 538 FSFSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
FS+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 618 FSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGIN 677
Query: 596 S--LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVA 650
L + ++ S Y +++++ R ++ N E + A+ + + +
Sbjct: 678 DPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLH 736
Query: 651 AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQ 710
A + + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++
Sbjct: 737 AFIWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFME 795
Query: 711 KIHNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
+ W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 796 DLDKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 841
Score = 96 (38.9 bits), Expect = 1.5e-23, Sum P(5) = 1.5e-23
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 98 KKRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAG 157
K+ K F PG + +LL+ A +E+RV ++ + D T++ A L MT
Sbjct: 207 KRGPKAEKVLQFDPGTKN--VTALLLEARELEARVIILSASEDDAATVYRAAAMLNMTGS 264
Query: 158 SYVWI 162
YVW+
Sbjct: 265 GYVWL 269
Score = 66 (28.3 bits), Expect = 1.5e-23, Sum P(5) = 1.5e-23
Identities = 16/54 (29%), Positives = 24/54 (44%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAK 102
FLRT +Q +++ Y W VI + DD GR L L ++ +K
Sbjct: 137 FLRTVPPYSHQSSVWFEMMRVYSWNHVILLVSDDHEGRAAQKRLETLLEERESK 190
Score = 61 (26.5 bits), Expect = 1.5e-23, Sum P(5) = 1.5e-23
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 294 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 341
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 342 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 394
Score = 49 (22.3 bits), Expect = 1.5e-23, Sum P(5) = 1.5e-23
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 400 IIWPGGETEKPRGY 413
>UNIPROTKB|H0Y2V8 [details] [associations]
symbol:GRIN2C "Glutamate receptor, ionotropic, N-methyl
D-aspartate 2C, isoform CRA_a" species:9606 "Homo sapiens"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 EMBL:CH471099 EMBL:AC068874
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 UniGene:Hs.436980
HGNC:HGNC:4587 HOVERGEN:HBG052636 HOGENOM:HOG000231061
Ensembl:ENST00000347612 UCSC:uc002jlu.1 Uniprot:H0Y2V8
Length = 873
Score = 183 (69.5 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 63/243 (25%), Positives = 116/243 (47%)
Query: 370 PNNGMPLRIAVP-NRVSYNEFVAKDKSPPG---VKGYCIDVFEAAVNLLPYPVPHNYIMY 425
P G + VP R S + F + D +P KG+CID+ + ++ + +
Sbjct: 421 PGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDILKKLARVVKFSYDLYLVTN 480
Query: 426 G-NGKR-NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKL 483
G +GKR ++N ++ +V + D A+G +TI R+++VDF+ P++E+G+ V+
Sbjct: 481 GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNG 540
Query: 484 KSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFN-NEFRGPPSQ-QLVTI- 535
SP AFL+P++ +W++ L V A+ V++ E+ +N N RG S TI
Sbjct: 541 TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTRGKKSGGPAFTIG 600
Query: 536 --FWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQI 591
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 601 KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV 660
Query: 592 EGI 594
G+
Sbjct: 661 SGL 663
Score = 127 (49.8 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 55/201 (27%), Positives = 92/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISSTE---P---IG-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + +Q + G+ D + P G V +GS N + +
Sbjct: 641 ASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERN-IRSNYRDM 699
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
+ +VK N AL K G + A + + + K C+ T+G + F +
Sbjct: 700 HTHMVKF-NQRSVEDALT-SLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATT 757
Query: 681 GWGFAFQRDS--PLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSL 738
G+G A Q+DS AIDL A+LQ +G+ QK+ WL+ C + + S+L +
Sbjct: 758 GYGIAMQKDSHWKRAIDL--ALLQFLGDGETQKLETVWLS-GICQNEKNEVMS--SKLDI 812
Query: 739 KSFWGLFLICGIACFLALIFF 759
+ G+F + +A LAL+ F
Sbjct: 813 DNMAGVFYMLLVAMGLALLVF 833
Score = 91 (37.1 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 32/157 (20%), Positives = 64/157 (40%)
Query: 13 SSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYP--YFLRTTQSDYYQMHAVADLVEYY 70
+ +A ++ + ++ +VP+LS + + + P FL+ S Q+ + ++E Y
Sbjct: 101 TEAVAQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 71 GWREVIAIFVDDDYGR----NGISVLGDALSKK-RAKISYKAPFSPGASRSAINSLLVGA 125
W A+ G G+ + DA R PG R+ LL
Sbjct: 161 DW-SAFAVITSLHPGHALFLEGVRAVADASHVSWRLLDVVTLELGPGGPRARTQRLL--- 216
Query: 126 NLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
+++ VFV + + + +F+ A G+ +VW+
Sbjct: 217 RQLDAPVFVAYCSREEAEVLFAEAAQAGLVGPGHVWL 253
Score = 49 (22.3 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 323 YWSNYSGLSVVAPEILYTKPPNSSSN----RHLYSVIWPG-EITATPRGWV 368
YW + L A + P S + RHL +V W G + + +P G++
Sbjct: 303 YWRQHGTLPAPAGDCRVHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYL 353
Score = 39 (18.8 bits), Expect = 1.6e-17, Sum P(3) = 1.6e-17
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 106 KAPFSPGASRS---AINSLLVGANLMESRVFVVHVNPDTG 142
K P P S S ++S + +E R FV+ +PD G
Sbjct: 383 KYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPDPG 422
>ZFIN|ZDB-GENE-020125-2 [details] [associations]
symbol:gria1b "glutamate receptor, ionotropic, AMPA
1b" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-2 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:BX890629 EMBL:CR749161 IPI:IPI00993241
ProteinModelPortal:F1QCH0 Ensembl:ENSDART00000129703 Bgee:F1QCH0
Uniprot:F1QCH0
Length = 930
Score = 177 (67.4 bits), Expect = 3.4e-23, Sum P(4) = 3.4e-23
Identities = 66/237 (27%), Positives = 98/237 (41%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 618 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 677
Query: 596 SLISSTE-PIGVQDGSFAWNYLV-DELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G DG + ++ + E +K+ E + R K
Sbjct: 678 DLAKQTEIAYGTLDGGSTKEFFRRSKIAVFEKMWSYMKSAEPTVFVKTTDEGVVRVRKSK 737
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 738 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRNPVNLAVLKLNEQG 797
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +AL+ F
Sbjct: 798 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALVEF 854
Score = 137 (53.3 bits), Expect = 3.4e-23, Sum P(4) = 3.4e-23
Identities = 38/145 (26%), Positives = 74/145 (51%)
Query: 385 SYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIV 438
++ + V DK +GYC+++ + Y + + G+GK R+ ++N +V
Sbjct: 424 NHEQLVGNDK----YEGYCVELAAEIAKHVGYS--YRLELVGDGKYGARDAETMMWNGMV 477
Query: 439 QQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIP 497
++ K D AV +TI R +++DF++P+M G+ +++ K K ++FL P
Sbjct: 478 GELVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYE 537
Query: 498 MWLVTGGFFLFVG-AVVWILEHRFN 521
+W+ F ++G +VV L RF+
Sbjct: 538 IWMCI--VFAYIGVSVVLFLVSRFS 560
Score = 82 (33.9 bits), Expect = 3.4e-23, Sum P(4) = 3.4e-23
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 276 GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWS 325
G + L ++ F GL+G ++F+ + N V+ G +G +++GYW+
Sbjct: 333 GIDIQRALQQVQFEGLTGHVQFNDKGHRTNFTVSVMEFGPSGPKKVGYWN 382
Score = 53 (23.7 bits), Expect = 3.4e-23, Sum P(4) = 3.4e-23
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P T+ Q+ LR D A+ LVE+Y W + + ++ D G + + D ++
Sbjct: 113 PIDTNNQFVIQLRPELQD-----ALIALVEHYKWNKFVYMYSSDSEGLTVLQKILDTAAE 167
Query: 99 KRAKIS 104
K +++
Sbjct: 168 KTWQVT 173
>UNIPROTKB|L7MTP7 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA]
GeneTree:ENSGT00700000104113 EMBL:AAEX03006734
Ensembl:ENSCAFT00000031003 Uniprot:L7MTP7
Length = 942
Score = 238 (88.8 bits), Expect = 3.9e-23, Sum P(4) = 3.9e-23
Identities = 82/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 511 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 570
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 571 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 630
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 631 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 690
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 691 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 749
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++ +
Sbjct: 750 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDL 808
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 809 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 852
Score = 96 (38.9 bits), Expect = 3.9e-23, Sum P(4) = 3.9e-23
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 98 KKRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAG 157
K+ K F PG + +LL+ A +E+RV ++ + D T++ A L MT
Sbjct: 206 KRGPKAEKVLQFDPGTKN--VTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGS 263
Query: 158 SYVWI 162
YVW+
Sbjct: 264 GYVWL 268
Score = 61 (26.5 bits), Expect = 3.9e-23, Sum P(4) = 3.9e-23
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 293 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 340
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 341 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 393
Score = 49 (22.3 bits), Expect = 3.9e-23, Sum P(4) = 3.9e-23
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 399 IIWPGGETEKPRGY 412
>UNIPROTKB|F6Y5R7 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
OMA:VYRSAAM Ensembl:ENSCAFT00000035191 EMBL:AAEX03006734
Uniprot:F6Y5R7
Length = 949
Score = 238 (88.8 bits), Expect = 4.0e-23, Sum P(4) = 4.0e-23
Identities = 82/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 518 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 577
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 578 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 637
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 638 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 697
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 698 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 756
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++ +
Sbjct: 757 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDL 815
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 816 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 859
Score = 96 (38.9 bits), Expect = 4.0e-23, Sum P(4) = 4.0e-23
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 98 KKRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAG 157
K+ K F PG + +LL+ A +E+RV ++ + D T++ A L MT
Sbjct: 213 KRGPKAEKVLQFDPGTKN--VTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGS 270
Query: 158 SYVWI 162
YVW+
Sbjct: 271 GYVWL 275
Score = 61 (26.5 bits), Expect = 4.0e-23, Sum P(4) = 4.0e-23
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 300 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 347
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 348 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 400
Score = 49 (22.3 bits), Expect = 4.0e-23, Sum P(4) = 4.0e-23
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 406 IIWPGGETEKPRGY 419
>FB|FBgn0264000 [details] [associations]
symbol:GluRIB "Glutamate receptor IB" species:7227
"Drosophila melanogaster" [GO:0008328 "ionotropic glutamate
receptor complex" evidence=ISS] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0006812 "cation
transport" evidence=ISS] [GO:0005230 "extracellular ligand-gated
ion channel activity" evidence=ISS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0030054
GO:GO:0045211 GO:GO:0006812 InterPro:IPR001828 OrthoDB:EOG4WM38M
GO:GO:0008328 GO:GO:0004971 GO:GO:0005234 HSSP:P19491
FlyBase:FBgn0264000 EMBL:AJ251886 EMBL:AJ251887 SMR:Q9TVG7
STRING:Q9TVG7 InParanoid:Q9TVG7 Uniprot:Q9TVG7
Length = 1095
Score = 181 (68.8 bits), Expect = 4.5e-23, Sum P(4) = 4.5e-23
Identities = 66/243 (27%), Positives = 107/243 (44%)
Query: 536 FWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
FWFS + + + S+ GR SSYTA+L + LTV+++ + I
Sbjct: 743 FWFSLAAFMQQGCDLSPRSVSGRIAAASWFFFTLILISSYTANLAAFLTVERMVTPINSP 802
Query: 595 DSLISSTEPIGVQDGSF----AWNYLVDELKIAESRLVKLKNMEE------YSIALARGP 644
+ L TE VQ G+ W++ +++ + N + Y + R
Sbjct: 803 EDLAMQTE---VQYGTLLHGSTWDFFRRSQIGLHNKMWEYMNSRKHVFVPTYDEGIKRVR 859
Query: 645 KGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLS 704
G A++ E P E ++ C+ VG+ G+G A S L ++ A+L L
Sbjct: 860 NSKGKYALLVESPKNEYVNAREPCDTMKVGRNLDTKGFGIATPLGSALKDPINLAVLTLK 919
Query: 705 ENGDLQKIHNKWLTYN-ECSMDLSPADGGGSRLSLKSFWGLF--LICG--IACFLALIFF 759
ENG+L K+ NKW ECS + S LSL + G+F LI G ++ F+A++ +
Sbjct: 920 ENGELIKLRNKWWYEKAECSTH-KDGETSHSELSLSNVAGIFYILIGGLLVSVFVAILEY 978
Query: 760 FCR 762
R
Sbjct: 979 CFR 981
Score = 109 (43.4 bits), Expect = 4.5e-23, Sum P(4) = 4.5e-23
Identities = 31/135 (22%), Positives = 70/135 (51%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIM---YGNGKRNPI--YNDIVQQVALNKFDAAVGDIT 454
+GYC D+ + L + YG+ K + ++ +V ++ + D A+ +T
Sbjct: 529 EGYCKDLADLLAKELGINYELRLVKDGNYGSEKSSAHGGWDGMVGELVRKEADIAIAAMT 588
Query: 455 IVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSP--WAFLKPFTIPMWLVTGGFFLFVG-A 511
I R +++DF++P+M G+ ++ + +K +P ++F+ P + +W+ F ++G +
Sbjct: 589 ITAERERVIDFSKPFMSLGISIMIK-KPVKQTPGVFSFMNPLSQEIWVSV--IFSYIGVS 645
Query: 512 VVWILEHRFN-NEFR 525
+V RF+ +E+R
Sbjct: 646 IVLFFVSRFSPHEWR 660
Score = 94 (38.1 bits), Expect = 4.5e-23, Sum P(4) = 4.5e-23
Identities = 49/248 (19%), Positives = 100/248 (40%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLT-SLQYPYFLRTTQSDYYQMHAV 63
++ A+ P S H S N +P ++ + LT S + F + + DY+Q A+
Sbjct: 107 MLGAVSPDSFDTLHSYS---NTFQMPFVTPWFPEKVLTPSSGFLDFALSMRPDYHQ--AI 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSL-- 121
D +++YGWR++I ++ D G + + L + AI L
Sbjct: 162 IDTIQFYGWRKIIYLYDSHD-GLLRLQQIYQGLRPGNESFQVELVKRISNVSMAIEFLHT 220
Query: 122 LVGANLMESRVFVVHVNPDTGLTIF-SVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDID 180
L E++ V+ + I + L + +Y ++ + + +E ++
Sbjct: 221 LEQIGRFENKHIVLDCPTEMAKQILIQHVRDLRLGRRTYHYLLSGLVMDDRWESEIIEFG 280
Query: 181 TMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA---YDSVWLVAH 237
+N + R + L + F WK L + + +G S + A YD+V+++
Sbjct: 281 AIN----ITGFRIVDTNRRLVREFYDSWKRLDPQMSVGAGRESISAQAALMYDAVFVLVE 336
Query: 238 ALDALLNE 245
A + +L +
Sbjct: 337 AFNKILRK 344
Score = 67 (28.6 bits), Expect = 4.5e-23, Sum P(4) = 4.5e-23
Identities = 17/86 (19%), Positives = 40/86 (46%)
Query: 270 LRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSR-RIGYWSNYS 328
+ ++ G + + L ++ GL+G+I+F+ D VN V+ + + ++ W++ +
Sbjct: 417 VNAWEHGDKISRYLRKVEIEGLTGDIKFNDDGRRVNYTLHVVEMTVNSAMVKVAEWNDDA 476
Query: 329 GLSVVAPEILYTKPPNSSSNRHLYSV 354
GL + + + +P Y V
Sbjct: 477 GLQPLNAKYVRLRPHVEFEKNRTYIV 502
>UNIPROTKB|F1PY46 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
EMBL:AAEX03006734 Ensembl:ENSCAFT00000031011 Uniprot:F1PY46
Length = 921
Score = 238 (88.8 bits), Expect = 5.4e-23, Sum P(4) = 5.4e-23
Identities = 82/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 490 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 549
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 550 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 609
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 610 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 669
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 670 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 728
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++ +
Sbjct: 729 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDL 787
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 788 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 831
Score = 94 (38.1 bits), Expect = 5.4e-23, Sum P(4) = 5.4e-23
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 109 FSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
F PG + +LL+ A +E+RV ++ + D T++ A L MT YVW+
Sbjct: 196 FDPGTKN--VTALLMEARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 247
Score = 61 (26.5 bits), Expect = 5.4e-23, Sum P(4) = 5.4e-23
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 272 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 319
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 320 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 372
Score = 49 (22.3 bits), Expect = 5.4e-23, Sum P(4) = 5.4e-23
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 378 IIWPGGETEKPRGY 391
>UNIPROTKB|B3LZ39 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7217 "Drosophila ananassae" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH902617 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG282132 RefSeq:XP_001953330.1
ProteinModelPortal:B3LZ39 STRING:B3LZ39 EnsemblMetazoa:FBtr0122404
GeneID:6500487 KEGG:dan:Dana_GF17704 FlyBase:FBgn0094722
InParanoid:B3LZ39 KO:K05208 OrthoDB:EOG4RXWF5 InterPro:IPR018882
Pfam:PF10562 Uniprot:B3LZ39
Length = 994
Score = 237 (88.5 bits), Expect = 7.1e-23, Sum P(2) = 7.1e-23
Identities = 76/332 (22%), Positives = 157/332 (47%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKP 493
+ ++ ++ + D V +TI R + ++F++P+ G+ ++ S+ +FL+P
Sbjct: 509 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQP 568
Query: 494 FTIPMWLVTGGFFLFVGAVVWILEH-----RF---NNEFRGPPSQQLVTIFWFSFSTMFF 545
F+ +W++ V V+++L+ RF +++ + L + WF++ +
Sbjct: 569 FSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLN 628
Query: 546 SH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI-DSLISST- 601
S E T S R +SYTA+L + L +++ +++ GI D+ + +T
Sbjct: 629 SGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 688
Query: 602 EPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAIVDELPY 658
E + GS Y +++++ R ++ N A+ KG +A I D
Sbjct: 689 ENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVKKGKLMAFIWDS-SR 747
Query: 659 IELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT 718
+E SK +CE T G+ F +SG+G Q+ SP ++ AIL+ E+G ++K+ +W+
Sbjct: 748 LEYEASK-DCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF 806
Query: 719 YNECSMDLSPADGGGSRLSLKSFWGLFLICGI 750
+ + + + L LK+ G+F++ G+
Sbjct: 807 HGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 838
Score = 135 (52.6 bits), Expect = 7.0e-12, Sum P(2) = 7.0e-12
Identities = 74/319 (23%), Positives = 140/319 (43%)
Query: 230 DSVWLVAHALDALL-NEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNF 288
DSV+++A A+ ++ NE T PK D S +N ++ G++ Q L N
Sbjct: 296 DSVYVLASAIKEMISNE----TIGEAPK--DCGDSAVN------WESGKRLFQYLKSRNI 343
Query: 289 TGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRI-GYWSNYSG------LSVVAPEILYT- 340
TG +G++ FD + + + YDV+NI + + G +S Y + + EI++
Sbjct: 344 TGETGQVAFDDNGDRIYAGYDVINIREQQKKHVVGKFS-YDNERAKMRMRINDSEIIWPG 402
Query: 341 ----KPPNSSSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSP 396
KP HL V+ I P +V R P+ F A D +
Sbjct: 403 KQRRKPEGIMIPTHL-KVL---TIEEKPFVYVRRMGDDEFRCE-PDERPCPLFNASDATA 457
Query: 397 PGV--KGYCIDVF-EAAVNL-LPYPV---PH----NYIMYGNGKRNPI---YNDIVQQVA 442
+GYCID+ E + + Y + P +YI+ + + + ++ ++
Sbjct: 458 NEFCCRGYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNSTGAMTLRKEWTGLIGELV 517
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVT 502
+ D V +TI R + ++F++P+ G+ ++ S+ +FL+PF+ +W++
Sbjct: 518 NERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILV 577
Query: 503 GGFFLFVGAVVWILEHRFN 521
V V+++L+ RF+
Sbjct: 578 MVSVHVVALVLYLLD-RFS 595
Score = 117 (46.2 bits), Expect = 7.1e-23, Sum P(2) = 7.1e-23
Identities = 42/179 (23%), Positives = 77/179 (43%)
Query: 1 MENEVVAAI--GPQSSGIAH--VISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQS 55
+EN V A + Q+SG +S+ ++P++ + D + + FLRT
Sbjct: 94 IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPP 153
Query: 56 DYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLG--DALSKK-------RAKISYK 106
Y+Q +++ ++ + +VI I D GR ++LG S+ RA +
Sbjct: 154 YYHQADVWLEMLSHFSYTKVIIIHSSDTDGR---AILGRFQTTSQTYYDDVDVRATVELI 210
Query: 107 APFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATD 165
F P + L+ +SRV++++ + + IF A MT +VWI T+
Sbjct: 211 VEFEP--KLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 267
>UNIPROTKB|B4GF83 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7234 "Drosophila persimilis" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH479182 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_002017168.1
ProteinModelPortal:B4GF83 EnsemblMetazoa:FBtr0187775 GeneID:6591341
KEGG:dpe:Dper_GL22160 FlyBase:FBgn0159752 Uniprot:B4GF83
Length = 1004
Score = 236 (88.1 bits), Expect = 9.4e-23, Sum P(2) = 9.4e-23
Identities = 76/332 (22%), Positives = 157/332 (47%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKP 493
+ ++ ++ + D V +TI R + ++F++P+ G+ ++ S+ +FL+P
Sbjct: 524 WTGLMGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQP 583
Query: 494 FTIPMWLVTGGFFLFVGAVVWILEH-----RF---NNEFRGPPSQQLVTIFWFSFSTMFF 545
F+ +W++ V V+++L+ RF +++ + L + WF++ +
Sbjct: 584 FSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLN 643
Query: 546 SH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI-DSLISST- 601
S E T S R +SYTA+L + L +++ +++ GI D+ + +T
Sbjct: 644 SGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 703
Query: 602 EPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAIVDELPY 658
E + GS Y +++++ R ++ N A+ KG +A I D
Sbjct: 704 ENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVKKGKLMAFIWDS-SR 762
Query: 659 IELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT 718
+E SK +CE T G+ F +SG+G Q+ SP ++ AIL+ E+G ++K+ +W+
Sbjct: 763 LEYEASK-DCELVTAGELFGRSGYGVGLQKGSPWTDSVTLAILEFHESGFMEKLDKQWIF 821
Query: 719 YNECSMDLSPADGGGSRLSLKSFWGLFLICGI 750
+ + + + L LK+ G+F++ G+
Sbjct: 822 HGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 853
Score = 146 (56.5 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 72/317 (22%), Positives = 144/317 (45%)
Query: 230 DSVWLVAHALDALL-NEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNF 288
DSV+++A A+ ++ NE T + PK D S +N ++ G++ Q L N
Sbjct: 311 DSVYVLASAIKEMISNE----TIAEAPK--DCGDSAVN------WESGKRLFQYLKSRNI 358
Query: 289 TGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRI-GYWSNYS-----GLSVVAPEILYTKP 342
TG +G++ FD + + + YDV+NI + + G +S S +++ EI++
Sbjct: 359 TGETGQVAFDDNGDRIYAGYDVINIREHQKKHVVGKFSYDSMRAKMRMNINDSEIIW--- 415
Query: 343 PNSSSNRHLYSVIWPGEI---TATPRGWVFPNN-GMPLRIAVPNRVSYNEFVAKDKSPPG 398
P NR ++ P + T + +V+ G P+ F A D +
Sbjct: 416 PGKQ-NRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNATDSTANE 474
Query: 399 V--KGYCIDVF-EAAVNL-LPYPV---PH----NYIMYGNGKRNPI---YNDIVQQVALN 444
+GYCID+ E + + Y + P +Y++ N + + ++ ++
Sbjct: 475 YCCRGYCIDLLIELSKRINFTYDLALSPDGQFGHYLLRNNSGAMTLRKEWTGLMGELVNE 534
Query: 445 KFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGG 504
+ D V +TI R + ++F++P+ G+ ++ S+ +FL+PF+ +W++
Sbjct: 535 RADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMV 594
Query: 505 FFLFVGAVVWILEHRFN 521
V V+++L+ RF+
Sbjct: 595 SVHVVALVLYLLD-RFS 610
Score = 117 (46.2 bits), Expect = 9.4e-23, Sum P(2) = 9.4e-23
Identities = 42/179 (23%), Positives = 77/179 (43%)
Query: 1 MENEVVAAI--GPQSSGIAH--VISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQS 55
+EN V A + Q+SG +S+ ++P++ + D + + FLRT
Sbjct: 109 IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPP 168
Query: 56 DYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLG--DALSKK-------RAKISYK 106
Y+Q +++ ++ + +VI I D GR ++LG S+ RA +
Sbjct: 169 YYHQADVWLEMLSHFAYTKVIIIHSSDTDGR---AILGRFQTTSQTYYDDVDVRATVELI 225
Query: 107 APFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATD 165
F P + L+ +SRV++++ + + IF A MT +VWI T+
Sbjct: 226 VEFEP--KLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 282
>UNIPROTKB|Q296F7 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0004970
"ionotropic glutamate receptor activity" evidence=ISS] [GO:0007268
"synaptic transmission" evidence=ISS] [GO:0007616 "long-term
memory" evidence=ISS] [GO:0008355 "olfactory learning"
evidence=ISS] [GO:0017146 "N-methyl-D-aspartate selective glutamate
receptor complex" evidence=ISS] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISS] [GO:0042391 "regulation
of membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0008355
GO:GO:0014069 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0007616 GO:GO:0042391 EMBL:CM000070 InterPro:IPR001828
GO:GO:0055074 GenomeReviews:CM000070_GR GO:GO:0017146 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 HSSP:P19491 KO:K05208
OrthoDB:EOG4RXWF5 InterPro:IPR018882 Pfam:PF10562 OMA:WLEMLSH
RefSeq:XP_001359355.1 ProteinModelPortal:Q296F7 GeneID:4802433
KEGG:dpo:Dpse_GA15505 FlyBase:FBgn0075522 InParanoid:Q296F7
Uniprot:Q296F7
Length = 1004
Score = 236 (88.1 bits), Expect = 9.4e-23, Sum P(2) = 9.4e-23
Identities = 76/332 (22%), Positives = 157/332 (47%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKP 493
+ ++ ++ + D V +TI R + ++F++P+ G+ ++ S+ +FL+P
Sbjct: 524 WTGLMGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQP 583
Query: 494 FTIPMWLVTGGFFLFVGAVVWILEH-----RF---NNEFRGPPSQQLVTIFWFSFSTMFF 545
F+ +W++ V V+++L+ RF +++ + L + WF++ +
Sbjct: 584 FSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAVWFAWGVLLN 643
Query: 546 SH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI-DSLISST- 601
S E T S R +SYTA+L + L +++ +++ GI D+ + +T
Sbjct: 644 SGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 703
Query: 602 EPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAIVDELPY 658
E + GS Y +++++ R ++ N A+ KG +A I D
Sbjct: 704 ENLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYATAEQAIQDVKKGKLMAFIWDS-SR 762
Query: 659 IELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT 718
+E SK +CE T G+ F +SG+G Q+ SP ++ AIL+ E+G ++K+ +W+
Sbjct: 763 LEYEASK-DCELVTAGELFGRSGYGVGLQKGSPWTDSVTLAILEFHESGFMEKLDKQWIF 821
Query: 719 YNECSMDLSPADGGGSRLSLKSFWGLFLICGI 750
+ + + + L LK+ G+F++ G+
Sbjct: 822 HGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 853
Score = 144 (55.7 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 72/317 (22%), Positives = 144/317 (45%)
Query: 230 DSVWLVAHALDALL-NEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNF 288
DSV+++A A+ ++ NE T + PK D S +N ++ G++ Q L N
Sbjct: 311 DSVYVLASAIKEMISNE----TIAEAPK--DCGDSAVN------WESGKRLFQYLKSRNI 358
Query: 289 TGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRI-GYWSNYS-----GLSVVAPEILYTKP 342
TG +G++ FD + + + YDV+NI + + G +S S +++ EI++
Sbjct: 359 TGETGQVAFDDNGDRIYAGYDVINIREHQKKHVVGKFSYDSMRAKMRMNINDSEIIW--- 415
Query: 343 PNSSSNRHLYSVIWPGEI---TATPRGWVFPNN-GMPLRIAVPNRVSYNEFVAKDKSPPG 398
P NR ++ P + T + +V+ G P+ F A D +
Sbjct: 416 PGKQ-NRKPEGIMIPTHLKVLTIEEKPFVYVRRMGDDEFRCEPDERPCPLFNATDSTANE 474
Query: 399 V--KGYCIDVF-EAAVNL-LPYPV---PH----NYIMYGNGKRNPI---YNDIVQQVALN 444
+GYCID+ E + + Y + P +Y++ N + + ++ ++
Sbjct: 475 YCCRGYCIDLLIELSKRINFTYDLALSPDGQFGHYLLRNNTGAMTLRKEWTGLMGELVNE 534
Query: 445 KFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGG 504
+ D V +TI R + ++F++P+ G+ ++ S+ +FL+PF+ +W++
Sbjct: 535 RADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMV 594
Query: 505 FFLFVGAVVWILEHRFN 521
V V+++L+ RF+
Sbjct: 595 SVHVVALVLYLLD-RFS 610
Score = 117 (46.2 bits), Expect = 9.4e-23, Sum P(2) = 9.4e-23
Identities = 42/179 (23%), Positives = 77/179 (43%)
Query: 1 MENEVVAAI--GPQSSGIAH--VISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQS 55
+EN V A + Q+SG +S+ ++P++ + D + + FLRT
Sbjct: 109 IENRVYAVVVSHEQTSGDLSPAAVSYTSGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPP 168
Query: 56 DYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLG--DALSKK-------RAKISYK 106
Y+Q +++ ++ + +VI I D GR ++LG S+ RA +
Sbjct: 169 YYHQADVWLEMLSHFAYTKVIIIHSSDTDGR---AILGRFQTTSQTYYDDVDVRATVELI 225
Query: 107 APFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATD 165
F P + L+ +SRV++++ + + IF A MT +VWI T+
Sbjct: 226 VEFEP--KLESFTEHLIDMKTAQSRVYLMYASTEDAQVIFRDAGEYNMTGEGHVWIVTE 282
>UNIPROTKB|Q14957 [details] [associations]
symbol:GRIN2C "Glutamate receptor ionotropic, NMDA 2C"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0009611
"response to wounding" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IEA] [GO:0033058 "directional locomotion"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA;TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005737 GO:GO:0014069
GO:GO:0008104 GO:GO:0005887 GO:GO:0009611 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0050885 GO:GO:0060079
DrugBank:DB00142 GO:GO:0030288 GO:GO:0005261 EMBL:AC068874
GO:GO:0042177 DrugBank:DB00145 InterPro:IPR001828 DrugBank:DB00836
GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0004972
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565 EMBL:L76224
EMBL:BC140801 IPI:IPI00215887 RefSeq:NP_000826.2 UniGene:Hs.436980
ProteinModelPortal:Q14957 SMR:Q14957 MINT:MINT-1776011
STRING:Q14957 TCDB:1.A.10.1.3 PhosphoSite:Q14957 DMDM:215274091
PaxDb:Q14957 PRIDE:Q14957 Ensembl:ENST00000293190 GeneID:2905
KEGG:hsa:2905 UCSC:uc002jlt.1 CTD:2905 GeneCards:GC17M072854
H-InvDB:HIX0039170 HGNC:HGNC:4587 HPA:HPA041666 MIM:138254
neXtProt:NX_Q14957 PharmGKB:PA28981 HOVERGEN:HBG052636
InParanoid:Q14957 KO:K05211 OMA:CTWRRIS OrthoDB:EOG42RD6M
PhylomeDB:Q14957 BindingDB:Q14957 ChEMBL:CHEMBL4109 GenomeRNAi:2905
NextBio:11503 ArrayExpress:Q14957 Bgee:Q14957 CleanEx:HS_GRIN2C
Genevestigator:Q14957 GermOnline:ENSG00000161509 Uniprot:Q14957
Length = 1233
Score = 183 (69.5 bits), Expect = 9.8e-23, Sum P(4) = 9.8e-23
Identities = 63/243 (25%), Positives = 116/243 (47%)
Query: 370 PNNGMPLRIAVP-NRVSYNEFVAKDKSPPG---VKGYCIDVFEAAVNLLPYPVPHNYIMY 425
P G + VP R S + F + D +P KG+CID+ + ++ + +
Sbjct: 421 PGTGGCVPNTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDILKKLARVVKFSYDLYLVTN 480
Query: 426 G-NGKR-NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKL 483
G +GKR ++N ++ +V + D A+G +TI R+++VDF+ P++E+G+ V+
Sbjct: 481 GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNG 540
Query: 484 KSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFN-NEFRGPPSQ-QLVTI- 535
SP AFL+P++ +W++ L V A+ V++ E+ +N N RG S TI
Sbjct: 541 TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTRGKKSGGPAFTIG 600
Query: 536 --FWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQI 591
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 601 KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV 660
Query: 592 EGI 594
G+
Sbjct: 661 SGL 663
Score = 127 (49.8 bits), Expect = 9.8e-23, Sum P(4) = 9.8e-23
Identities = 55/201 (27%), Positives = 92/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISSTE---P---IG-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + +Q + G+ D + P G V +GS N + +
Sbjct: 641 ASYTANLAAFMIQEQYIDTVSGLSDKKFQRPQDQYPPFRFGTVPNGSTERN-IRSNYRDM 699
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
+ +VK N AL K G + A + + + K C+ T+G + F +
Sbjct: 700 HTHMVKF-NQRSVEDALT-SLKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATT 757
Query: 681 GWGFAFQRDS--PLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSL 738
G+G A Q+DS AIDL A+LQ +G+ QK+ WL+ C + + S+L +
Sbjct: 758 GYGIAMQKDSHWKRAIDL--ALLQFLGDGETQKLETVWLS-GICQNEKNEVMS--SKLDI 812
Query: 739 KSFWGLFLICGIACFLALIFF 759
+ G+F + +A LAL+ F
Sbjct: 813 DNMAGVFYMLLVAMGLALLVF 833
Score = 91 (37.1 bits), Expect = 9.8e-23, Sum P(4) = 9.8e-23
Identities = 32/157 (20%), Positives = 64/157 (40%)
Query: 13 SSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYP--YFLRTTQSDYYQMHAVADLVEYY 70
+ +A ++ + ++ +VP+LS + + + P FL+ S Q+ + ++E Y
Sbjct: 101 TEAVAQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 71 GWREVIAIFVDDDYGR----NGISVLGDALSKK-RAKISYKAPFSPGASRSAINSLLVGA 125
W A+ G G+ + DA R PG R+ LL
Sbjct: 161 DW-SAFAVITSLHPGHALFLEGVRAVADASHVSWRLLDVVTLELGPGGPRARTQRLL--- 216
Query: 126 NLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
+++ VFV + + + +F+ A G+ +VW+
Sbjct: 217 RQLDAPVFVAYCSREEAEVLFAEAAQAGLVGPGHVWL 253
Score = 49 (22.3 bits), Expect = 9.8e-23, Sum P(4) = 9.8e-23
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 323 YWSNYSGLSVVAPEILYTKPPNSSSN----RHLYSVIWPG-EITATPRGWV 368
YW + L A + P S + RHL +V W G + + +P G++
Sbjct: 303 YWRQHGTLPAPAGDCRVHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYL 353
Score = 39 (18.8 bits), Expect = 6.0e-17, Sum P(3) = 6.0e-17
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 106 KAPFSPGASRS---AINSLLVGANLMESRVFVVHVNPDTG 142
K P P S S ++S + +E R FV+ +PD G
Sbjct: 383 KYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPDPG 422
Score = 38 (18.4 bits), Expect = 9.4e-14, Sum P(4) = 9.4e-14
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 643 GPKGGGVAAIVDELP 657
GP GG AA+V P
Sbjct: 961 GPPDGGRAALVRRAP 975
>UNIPROTKB|B4KD90 [details] [associations]
symbol:Nmdar1 "Glutamate [NMDA] receptor subunit 1"
species:7230 "Drosophila mojavensis" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007616 "long-term memory"
evidence=ISS] [GO:0008355 "olfactory learning" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0042391 "regulation of
membrane potential" evidence=ISS] [GO:0045211 "postsynaptic
membrane" evidence=ISS] [GO:0055074 "calcium ion homeostasis"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0008355 GO:GO:0014069 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0007616 GO:GO:0030288 GO:GO:0042391
InterPro:IPR001828 GO:GO:0055074 EMBL:CH933806 GO:GO:0017146
GO:GO:0005234 GO:GO:0004970 KO:K05208 OrthoDB:EOG4RXWF5
InterPro:IPR018882 Pfam:PF10562 RefSeq:XP_001999411.1
ProteinModelPortal:B4KD90 EnsemblMetazoa:FBtr0175219 GeneID:6573325
KEGG:dmo:Dmoj_GI24494 FlyBase:FBgn0147216 InParanoid:B4KD90
Uniprot:B4KD90
Length = 980
Score = 236 (88.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 76/332 (22%), Positives = 157/332 (47%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKP 493
+ ++ ++ + D V +TI R + ++F++P+ G+ ++ S+ +FL+P
Sbjct: 509 WTGLIGELVNERADMIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQP 568
Query: 494 FTIPMWLVTGGFFLFVGAVVWILEH-----RF---NNEFRGPPSQQLVTIFWFSFSTMFF 545
F+ +W++ V V+++L+ RF +++ + L + WF++ +
Sbjct: 569 FSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSHSDSNEEKALNLSSAIWFAWGVLLN 628
Query: 546 SH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI-DSLISST- 601
S E T S R +SYTA+L + L +++ +++ GI D+ + +T
Sbjct: 629 SGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLSGINDARLRNTM 688
Query: 602 EPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAIVDELPY 658
E + GS Y +++++ R ++ N A+ KG +A I D
Sbjct: 689 ENLTCATVKGSSVDMYFRRQVELSNMYRTMESNNYVTAEQAIQDVKKGKLMAFIWDS-SR 747
Query: 659 IELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT 718
+E SK +CE T G+ F +SG+G Q+ SP ++ AIL+ E+G ++K+ +W+
Sbjct: 748 LEYEASK-DCELVTAGELFGRSGYGIGLQKGSPWTDAVTLAILEFHESGFMEKLDKQWIF 806
Query: 719 YNECSMDLSPADGGGSRLSLKSFWGLFLICGI 750
+ + + + L LK+ G+F++ G+
Sbjct: 807 HGHVQQNCELFEKTPNTLGLKNMAGVFILVGV 838
Score = 116 (45.9 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 40/172 (23%), Positives = 74/172 (43%)
Query: 5 VVAAIGPQSSGIAHV-ISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQSDYYQMHA 62
VV + G S ++ +S+ ++P++ + D + + FLRT Y+Q
Sbjct: 101 VVVSHGQTSGDLSPAAVSYTTGFYSIPVIGISSRDAAFSDKNIHVSFLRTVPPYYHQADV 160
Query: 63 VADLVEYYGWREVIAIFVDDDYGRNGISVLG--DALSKK-------RAKISYKAPFSPGA 113
+++ ++ + +VI I D GR ++LG S+ RA + F P
Sbjct: 161 WLEMLSHFLYTKVIIIHSSDTDGR---AILGRFQTTSQTYYDDVDARATVELIVEFEP-- 215
Query: 114 SRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATD 165
+ L+ +SRV++V+ + + IF A MT +VWI T+
Sbjct: 216 KLESFTEHLIDMKTAQSRVYLVYASTEDAQVIFRDAAEYNMTGEGHVWIVTE 267
Score = 102 (41.0 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
Identities = 73/313 (23%), Positives = 130/313 (41%)
Query: 88 GISVLGDALSKKRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFS 147
GIS A S K +S+ P ++ + L + ++ + ++V ++H + G I
Sbjct: 130 GISSRDAAFSDKNIHVSFLRTVPPYYHQADV-WLEMLSHFLYTKVIIIHSSDTDGRAILG 188
Query: 148 VAKSLGMT------AGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGVVALRHHTPDTDL- 200
++ T A + V + ++ P + TE + ID V + T D +
Sbjct: 189 RFQTTSQTYYDDVDARATVELIVEFEPKLESFTEHL-IDMKTAQSRVYLVYASTEDAQVI 247
Query: 201 -----KKNFISR---W---KNLKYKENSPSGFNSYAL-YAY-------DSVWLVAHALDA 241
+ N W + + +N+P G L +A+ DSV+++A A+
Sbjct: 248 FRDAAEYNMTGEGHVWIVTEQALHAKNTPDGALGLQLEHAHSDKGHIRDSVYVLASAIKE 307
Query: 242 LL-NEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDAD 300
++ NE T + PK D S +N ++ G++ Q L N TG +G++ FD +
Sbjct: 308 MISNE----TIAEAPK--DCGDSAVN------WESGKRLFQYLKSRNITGETGQVAFDDN 355
Query: 301 KNLVNPAYDVLNIGGTGSRRI-GYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVIWPGE 359
+ + YDV+NI + I G +S Y L A I+ N S +IW G+
Sbjct: 356 GDRIYAGYDVINIRDHQKQHIVGKFS-YDSLK--AKMIMRI---NDSQ------IIWGGK 403
Query: 360 ITATPRGWVFPNN 372
P G + P +
Sbjct: 404 QRRKPEGIMIPTH 416
Score = 98 (39.6 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 30/134 (22%), Positives = 66/134 (49%)
Query: 400 KGYCIDVF-EAAVNL-LPYPV---PH----NYIMYGNGKRNPI---YNDIVQQVALNKFD 447
+GYCID+ E + + Y + P +YI+ N + + ++ ++ + D
Sbjct: 463 RGYCIDLLIELSKRINFTYDLALSPDGQFGHYILRNNTGAMTLRKEWTGLIGELVNERAD 522
Query: 448 AAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFL 507
V +TI R + ++F++P+ G+ ++ S+ +FL+PF+ +W++
Sbjct: 523 MIVAPLTINPERAEYIEFSKPFKYQGITILEKKPSRSSTLVSFLQPFSNTLWILVMVSVH 582
Query: 508 FVGAVVWILEHRFN 521
V V+++L+ RF+
Sbjct: 583 VVALVLYLLD-RFS 595
>ZFIN|ZDB-GENE-020125-1 [details] [associations]
symbol:gria1a "glutamate receptor, ionotropic, AMPA
1a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-020125-1
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05197 EMBL:AF525741
IPI:IPI00512681 RefSeq:NP_991161.1 UniGene:Dr.88082
ProteinModelPortal:Q71E65 SMR:Q71E65 GeneID:798689 KEGG:dre:798689
CTD:798689 InParanoid:Q71E65 NextBio:20933517 Uniprot:Q71E65
Length = 914
Score = 181 (68.8 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 69/247 (27%), Positives = 104/247 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 611 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 670
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + E +K+ + + R K
Sbjct: 671 DLAKQTEIAYGTLDAGSTKEFFRRSKIAVFEKMWSYMKSADPSVFVKTTDEGVMRVRKSK 730
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + SPL ++ A+L+L+E G
Sbjct: 731 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSPLRNPVNLAVLKLNEQG 790
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFFFCR 762
L K+ NKW EC + S LSL + G+F I G+A +AL+ F +
Sbjct: 791 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALVEFCYK 850
Query: 763 VCGQFRR 769
+ RR
Sbjct: 851 SRTESRR 857
Score = 137 (53.3 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 41/147 (27%), Positives = 76/147 (51%)
Query: 385 SYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIM--YGNGK---RNP---IYND 436
++ F DK +GYC+ E A + + V ++YI+ +GK R+ ++N
Sbjct: 423 NHEHFTGNDK----YEGYCV---ELAAEIAKH-VGYHYILKIVADGKYGARDAETMMWNG 474
Query: 437 IVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFT 495
+V ++ K D AV +TI R +++DF++P+M G+ +++ K K ++FL P
Sbjct: 475 MVGELVYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLA 534
Query: 496 IPMWLVTGGFFLFVG-AVVWILEHRFN 521
+W+ F ++G +VV L RF+
Sbjct: 535 YEIWMCI--VFAYIGVSVVLFLVSRFS 559
Score = 77 (32.2 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 276 GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWS 325
G + L ++ GL+G I+F+ N + V+ + TG +++GYW+
Sbjct: 332 GIDIQRALQQVRIEGLTGHIQFNEKGRRTNYSISVMELRPTGPKKVGYWN 381
Score = 48 (22.0 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 22/92 (23%), Positives = 40/92 (43%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQMHAVA 64
V A IG +++ L+V ++ + P S Q+ LR D A+
Sbjct: 81 VYAIIGVYDRKTVNMLMSFCGALHVCFVT--PSFPMENSNQFVIQLRPELQD-----ALV 133
Query: 65 DLVEYYGWREVIAIFVDDDYGRNGISVLGDAL 96
++E+Y W + + ++ D +G+SVL L
Sbjct: 134 GVIEHYRWSKFVYMYSSD----SGLSVLQKVL 161
Score = 48 (22.0 bits), Expect = 9.2e-10, Sum P(2) = 9.2e-10
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 42 TSLQYPYFL------RTTQSDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
T L+ PY + T +D Y+ + V A++ ++ G+ ++ I D YG
Sbjct: 411 TILESPYVMLKKNHEHFTGNDKYEGYCVELAAEIAKHVGYHYILKIVADGKYG 463
>ZFIN|ZDB-GENE-061207-27 [details] [associations]
symbol:grin2bb "glutamate receptor, ionotropic,
N-methyl D-aspartate 2B, genome duplicate b" species:7955 "Danio
rerio" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-061207-27 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:BX537268 EMBL:BX901927
EMBL:BX901961 IPI:IPI00508048 ProteinModelPortal:F1RDX3
Ensembl:ENSDART00000092613 Bgee:F1RDX3 Uniprot:F1RDX3
Length = 1770
Score = 203 (76.5 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 83/340 (24%), Positives = 152/340 (44%)
Query: 278 QFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGS-RRIGYWSNYSGLSV---V 333
+ L+ L+ + F G + + F D ++P ++ + R+G W N S L++ V
Sbjct: 411 EVLRYLMNVTFEGRN--LSFSEDGFQMHPKLVIILLNKERQYERVGKWENGS-LAMKYHV 467
Query: 334 APEI-LYTKPPNSSSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYN-EFVA 391
P LY+ + HL S++ E V P +G +R VP R + +
Sbjct: 468 WPRFELYSDAEEREDD-HL-SIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLQNLT 525
Query: 392 KDKS---PPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKF 446
D KG+CID+ + + + + G +GK+ N +N +V +V L
Sbjct: 526 GDSGIYIKRCCKGFCIDILKKIAKSVKFTYDLYLVTNGKHGKKINGTWNGMVGEVVLKNA 585
Query: 447 DAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFF 506
AVG +TI R++++DF+ P++E+G+ V+ SP AFL+PF+ +W++
Sbjct: 586 HMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVML 645
Query: 507 LFVGAV-VWILEH----RFNN---EFRGP--PSQQLVTIFWFSFSTMFFSHR--ENTVSS 554
L V AV V++ E+ +N + R P PS + W + +F + +N +
Sbjct: 646 LIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGT 705
Query: 555 LGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ +SYTA+L + + ++ Q+ G+
Sbjct: 706 TSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVTGL 745
Score = 129 (50.5 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 56/203 (27%), Positives = 96/203 (47%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + + K
Sbjct: 723 ASYTANLAAFMIQEEYVDQVTGLSDKKFQHPNDFSPPFRFGTVPNGSTERN-IRNNYKEM 781
Query: 624 ESRLVKL--KNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE--FT 678
S + KN+ E +L K G + A + + + + C+ T+G F
Sbjct: 782 HSYMTSFHQKNVNEALHSL----KSGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFA 837
Query: 679 KSGWGFAFQRDS--PLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRL 736
+G+G A Q+DS A+DL AILQL +G+++++ WLT C + + S+L
Sbjct: 838 TTGYGIAIQKDSGWKRAVDL--AILQLFGDGEMEELEALWLT-GICHNEKNEVMS--SQL 892
Query: 737 SLKSFWGLFLICGIACFLALIFF 759
+ + G+F + G A L+LI F
Sbjct: 893 DVDNMAGVFYMLGAAMALSLITF 915
Score = 76 (31.8 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 33/179 (18%), Positives = 69/179 (38%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSF-GATDPTLTSLQ-YPYFLRTTQSDYYQMHA 62
VV IA ++ + + ++P+L G + + + + F + S Q
Sbjct: 171 VVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMIMAAKDDHSMFFQFGPSIEQQASV 230
Query: 63 VADLVEYYGWR--EVIAIFVD--DDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAI 118
+ +++E Y W ++ + D+ S + ++ + S S I
Sbjct: 231 MLNIMEEYDWYIFSIVTTYYPGHQDFVNRIRSTVDNSFVGWELEEVLLLDMSVDDGDSKI 290
Query: 119 NSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPV 177
+ + ++S V +++ + TIF VA S+G+T Y WI + D+ V
Sbjct: 291 QNQM---KKLQSPVILLYCTKEEATTIFEVAHSVGLTGYGYTWIVPSLVAGDTDNVPNV 346
>UNIPROTKB|F1NMB0 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0007423 "sensory organ development" evidence=IEA] [GO:0007612
"learning" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0050966 "detection
of mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=ISS] [GO:0045202 "synapse" evidence=ISS]
[GO:0043005 "neuron projection" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=ISS] [GO:0045211
"postsynaptic membrane" evidence=ISS] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISS] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=ISS] [GO:0007613 "memory" evidence=ISS]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=ISS] [GO:0043408 "regulation of MAPK cascade"
evidence=ISS] [GO:0008021 "synaptic vesicle" evidence=ISS]
[GO:0014049 "positive regulation of glutamate secretion"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0048167 GO:GO:0014069 GO:GO:0045471 GO:GO:0007613
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0043005 GO:GO:0042734 GO:GO:0014049 GO:GO:0030288
GO:GO:0046982 InterPro:IPR001828 GO:GO:0017146 GO:GO:0043408
GO:GO:0005234 GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 OMA:CTNRSHL
EMBL:AADN02006024 EMBL:AADN02006025 EMBL:AADN02006026
EMBL:AADN02006027 IPI:IPI00599161 ProteinModelPortal:F1NMB0
Ensembl:ENSGALT00000019272 Uniprot:F1NMB0
Length = 1370
Score = 195 (73.7 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 90/390 (23%), Positives = 168/390 (43%)
Query: 230 DSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFT 289
D + ++ A +L+E +F +PK S N R++ + L+ + F
Sbjct: 157 DGIAIITTAASDMLSE---HSFIPEPK-----SSCYNTQEKRIYQSNM-LNRYLINVTFE 207
Query: 290 GLSGEIRFDADKNLVNPAYDVLNIGGTGS-RRIGYWSNYSGLSV---VAPEI-LYTKPPN 344
G + + F D ++P ++ + R+G W L + V P LY P+
Sbjct: 208 GRN--LSFSEDGYQMHPKLVIILLTKERKWERVGKWKEKK-LQMKYYVWPRFELY---PD 261
Query: 345 SSSNR--HLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVK-- 400
S HL S++ E V P +G +R VP + D+ P +K
Sbjct: 262 SEEREDDHL-SIVTLEEAPFVIVENVDPLSGTCMRNTVPCQKRIVTENKTDEEPDYMKKC 320
Query: 401 --GYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAVGDITIV 456
G+CID+ + + + + G +GK+ N +N ++ +V + AVG +TI
Sbjct: 321 CKGFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVTKRAYMAVGSLTIN 380
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWI 515
R+++VDF+ P++E+G+ V+ SP AFL+PF+ +W++ L + AV V++
Sbjct: 381 EERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIISAVAVFV 440
Query: 516 LEH----RFNN---EFRGP--PSQQLVTIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXX 564
E+ +N + R P PS + W + +F + +N + +
Sbjct: 441 FEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWA 500
Query: 565 XXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ Q+ G+
Sbjct: 501 FFAVIFLASYTANLAAFMIQEEYVDQVSGL 530
Score = 140 (54.3 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 54/201 (26%), Positives = 93/201 (46%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + +
Sbjct: 508 ASYTANLAAFMIQEEYVDQVSGLSDKKFQKPNDFSPPFRFGTVPNGSTERN-IRNNYPEM 566
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
S +VK N AL K G + A + + + + C+ T+G + F +
Sbjct: 567 HSYMVKF-NQRGVDDALF-SLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFAST 624
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A Q+DS + AILQL +G+++++ WLT C + + S+L + +
Sbjct: 625 GYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVMS--SQLDIDN 681
Query: 741 FWGLFLICGIACFLALIFFFC 761
G+F + G A L+LI F C
Sbjct: 682 MAGVFYMLGAAMALSLITFIC 702
Score = 69 (29.3 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 16/54 (29%), Positives = 26/54 (48%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
++S V +++ + IF VA S+G+T Y WI + D T P + T
Sbjct: 85 LQSPVILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTD-TVPSEFPT 137
>UNIPROTKB|F1SQ84 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0048167 GO:GO:0014069
GO:GO:0007423 GO:GO:0045471 GO:GO:0007613 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0007612 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0001701 GO:GO:0035235
GO:GO:0001967 GO:GO:0060079 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 OMA:CTNRSHL EMBL:CU463198
EMBL:CU694276 Ensembl:ENSSSCT00000000660 Uniprot:F1SQ84
Length = 1351
Score = 204 (76.9 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 90/390 (23%), Positives = 172/390 (44%)
Query: 230 DSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFT 289
D + ++ A +L+E +F +PK S N R++ + L+ + F
Sbjct: 162 DGIAIITTAASDMLSE---HSFIPEPK-----SSCYNTHEKRIYQSNM-LNRYLINVTFE 212
Query: 290 GLSGEIRFDADKNLVNPAYDVLNIGGTGS-RRIGYWSNYSGLSV---VAPEILYTKPPNS 345
G + + F D ++P ++ + R+G W + S L + V P +
Sbjct: 213 GRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKS-LQMKYYVWPRMC--PETEE 267
Query: 346 SSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSP--PGV---- 399
+ HL S++ E V P +G +R VP + V+++K+ PG
Sbjct: 268 QEDDHL-SIVTLEEAPFVIVESVDPLSGTCMRNTVPCQ---KRIVSENKTDEEPGYIKKC 323
Query: 400 -KGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAVGDITIV 456
KG+CID+ + + + + G +GK+ N +N ++ +V + + AVG +TI
Sbjct: 324 CKGFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTIN 383
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWI 515
R+++VDF+ P++E+G+ V+ SP AFL+PF+ +W++ L V AV V++
Sbjct: 384 EERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFV 443
Query: 516 LEH----RFNN---EFRGP--PSQQLVTIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXX 564
E+ +N + R P PS + W + +F + +N + +
Sbjct: 444 FEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWA 503
Query: 565 XXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ Q+ G+
Sbjct: 504 FFAVIFLASYTANLAAFMIQEEYVDQVSGL 533
Score = 130 (50.8 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 52/201 (25%), Positives = 93/201 (46%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + ++
Sbjct: 511 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEM- 569
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
+ + K N AL K G + A + + + + C+ T+G + F +
Sbjct: 570 HAYMGKF-NQRGVDDALL-SLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFAST 627
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A Q+DS + AILQL +G+++++ WLT C + + S+L + +
Sbjct: 628 GYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVMS--SQLDIDN 684
Query: 741 FWGLFLICGIACFLALIFFFC 761
G+F + G A L+LI F C
Sbjct: 685 MAGVFYMLGAAMALSLITFIC 705
Score = 68 (29.0 bits), Expect = 2.4e-22, Sum P(3) = 2.4e-22
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
++S + +++ + IF VA S+G+T Y WI + D T P + T
Sbjct: 90 LQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTD-TVPSEFPT 142
>UNIPROTKB|Q13224 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007613 "memory"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0048266
"behavioral response to pain" evidence=IEA] [GO:0050966 "detection
of mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IDA] [GO:0045471 "response to
ethanol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016594 "glycine binding" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=ISS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007215
"glutamate receptor signaling pathway" evidence=TAS] [GO:0007611
"learning or memory" evidence=TAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0009986 "cell surface" evidence=ISS] [GO:0043005 "neuron
projection" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0021987 GO:GO:0021766
GO:GO:0014069 GO:GO:0009986 GO:GO:0030018 GO:GO:0071363
GO:GO:0007423 GO:GO:0051592 GO:GO:0045471 GO:GO:0060992
GO:GO:0046872 GO:GO:0008144 GO:GO:0042220 GO:GO:0007268
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0051602 GO:GO:0008270
GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0043005
GO:GO:0007616 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0001975 GO:GO:0014049 DrugBank:DB00142 GO:GO:0048511
GO:GO:0030288 GO:GO:0051707 GO:GO:0007611 GO:GO:0043083
GO:GO:0010942 GO:GO:0001508 GO:GO:0008306 GO:GO:0043113
GO:GO:0009743 Pathway_Interaction_DB:reelinpathway GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0051597 GO:GO:0060416
GO:GO:0071230 GO:GO:0071396 DrugBank:DB00836 Orphanet:178469
GO:GO:0001964 GO:GO:0050806 GO:GO:0032026 DrugBank:DB00502
DrugBank:DB01043 DrugBank:DB00949 GO:GO:0010350 GO:GO:0071287
GO:GO:0017146 GO:GO:0042165 GO:GO:0043408 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GO:GO:0071359 GO:GO:0004972
HOVERGEN:HBG052635 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 CTD:2904 KO:K05210 OrthoDB:EOG4Z8XVM
EMBL:U90278 EMBL:U88963 EMBL:U11287 EMBL:BC113618 EMBL:BC113620
EMBL:U28758 EMBL:U28861 EMBL:U28862 IPI:IPI00297933 PIR:I39066
PIR:S52086 RefSeq:NP_000825.2 UniGene:Hs.654430 PDB:1S11 PDB:1S2S
PDB:2IPV PDBsum:1S11 PDBsum:1S2S PDBsum:2IPV
ProteinModelPortal:Q13224 SMR:Q13224 IntAct:Q13224 MINT:MINT-127466
STRING:Q13224 PhosphoSite:Q13224 DMDM:14548162 PaxDb:Q13224
PeptideAtlas:Q13224 PRIDE:Q13224 Ensembl:ENST00000279593
GeneID:2904 KEGG:hsa:2904 UCSC:uc001rbt.2 GeneCards:GC12M013614
H-InvDB:HIX0036873 HGNC:HGNC:4586 MIM:138252 MIM:613970
neXtProt:NX_Q13224 PharmGKB:PA28980 InParanoid:Q13224 OMA:CTNRSHL
PhylomeDB:Q13224 BindingDB:Q13224 ChEMBL:CHEMBL1904 GenomeRNAi:2904
NextBio:11499 ArrayExpress:Q13224 Bgee:Q13224 CleanEx:HS_GRIN2B
Genevestigator:Q13224 GermOnline:ENSG00000150086 Uniprot:Q13224
Length = 1484
Score = 203 (76.5 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 90/390 (23%), Positives = 171/390 (43%)
Query: 230 DSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFT 289
D + ++ A +L+E +F +PK S N R++ + L+ + F
Sbjct: 295 DGIAIITTAASDMLSE---HSFIPEPK-----SSCYNTHEKRIYQSNM-LNRYLINVTFE 345
Query: 290 GLSGEIRFDADKNLVNPAYDVLNIGGTGS-RRIGYWSNYSGLSV---VAPEILYTKPPNS 345
G + + F D ++P ++ + R+G W + S L + V P +
Sbjct: 346 GRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKS-LQMKYYVWPRMC--PETEE 400
Query: 346 SSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSP--PGV---- 399
+ HL S++ E V P +G +R VP + V ++K+ PG
Sbjct: 401 QEDDHL-SIVTLEEAPFVIVESVDPLSGTCMRNTVPCQ---KRIVTENKTDEEPGYIKKC 456
Query: 400 -KGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAVGDITIV 456
KG+CID+ + + + + G +GK+ N +N ++ +V + + AVG +TI
Sbjct: 457 CKGFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTIN 516
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWI 515
R+++VDF+ P++E+G+ V+ SP AFL+PF+ +W++ L V AV V++
Sbjct: 517 EERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFV 576
Query: 516 LEH----RFNN---EFRGP--PSQQLVTIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXX 564
E+ +N + R P PS + W + +F + +N + +
Sbjct: 577 FEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWA 636
Query: 565 XXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ Q+ G+
Sbjct: 637 FFAVIFLASYTANLAAFMIQEEYVDQVSGL 666
Score = 130 (50.8 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 52/201 (25%), Positives = 93/201 (46%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + ++
Sbjct: 644 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEM- 702
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
+ + K N AL K G + A + + + + C+ T+G + F +
Sbjct: 703 HAYMGKF-NQRGVDDALL-SLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFAST 760
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A Q+DS + AILQL +G+++++ WLT C + + S+L + +
Sbjct: 761 GYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVMS--SQLDIDN 817
Query: 741 FWGLFLICGIACFLALIFFFC 761
G+F + G A L+LI F C
Sbjct: 818 MAGVFYMLGAAMALSLITFIC 838
Score = 70 (29.7 bits), Expect = 2.7e-22, Sum P(3) = 2.7e-22
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
++S + +++ + IF VA S+G+T Y WI + D T P + T
Sbjct: 223 LQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTD-TVPAEFPT 275
>UNIPROTKB|Q5R1P3 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9615 "Canis lupus familiaris" [GO:0008270 "zinc ion
binding" evidence=ISS] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0048167 "regulation of synaptic plasticity"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEA]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IEA] [GO:0016594 "glycine binding" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008021
"synaptic vesicle" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0007612 "learning" evidence=IEA] [GO:0007423 "sensory organ
development" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0048167
GO:GO:0014069 GO:GO:0007423 GO:GO:0045471 GO:GO:0046872
GO:GO:0007613 GO:GO:0005262 GO:GO:0030054 GO:GO:0045211
GO:GO:0007612 GO:GO:0008021 GO:GO:0048266 GO:GO:0050966
GO:GO:0008270 GO:GO:0001701 GO:GO:0035235 GO:GO:0001967
GO:GO:0060079 GO:GO:0030288 GO:GO:0001662 InterPro:IPR001828
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GO:GO:0004972 HOVERGEN:HBG052635 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 HOGENOM:HOG000113802
EMBL:AB195992 RefSeq:NP_001008719.1 UniGene:Cfa.16222 HSSP:Q00959
ProteinModelPortal:Q5R1P3 SMR:Q5R1P3 STRING:Q5R1P3 PRIDE:Q5R1P3
Ensembl:ENSCAFT00000020886 GeneID:494009 KEGG:cfa:494009 CTD:2904
InParanoid:Q5R1P3 KO:K05210 OrthoDB:EOG4Z8XVM NextBio:20865538
Uniprot:Q5R1P3
Length = 1485
Score = 204 (76.9 bits), Expect = 3.4e-22, Sum P(3) = 3.4e-22
Identities = 90/390 (23%), Positives = 172/390 (44%)
Query: 230 DSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFT 289
D + ++ A +L+E +F +PK S N R++ + L+ + F
Sbjct: 295 DGIAIITTAASDMLSE---HSFIPEPK-----SSCYNTHEKRIYQSNM-LNRYLINVTFE 345
Query: 290 GLSGEIRFDADKNLVNPAYDVLNIGGTGS-RRIGYWSNYSGLSV---VAPEILYTKPPNS 345
G + + F D ++P ++ + R+G W + S L + V P +
Sbjct: 346 GRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKS-LQMKYYVWPRMC--PETEE 400
Query: 346 SSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSP--PGV---- 399
+ HL S++ E V P +G +R VP + V+++K+ PG
Sbjct: 401 QEDDHL-SIVTLEEAPFVIVESVDPLSGTCMRNTVPCQ---KRIVSENKTDEEPGYIKKC 456
Query: 400 -KGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAVGDITIV 456
KG+CID+ + + + + G +GK+ N +N ++ +V + + AVG +TI
Sbjct: 457 CKGFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTIN 516
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWI 515
R+++VDF+ P++E+G+ V+ SP AFL+PF+ +W++ L V AV V++
Sbjct: 517 EERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFV 576
Query: 516 LEH----RFNN---EFRGP--PSQQLVTIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXX 564
E+ +N + R P PS + W + +F + +N + +
Sbjct: 577 FEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWA 636
Query: 565 XXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ Q+ G+
Sbjct: 637 FFAVIFLASYTANLAAFMIQEEYVDQVSGL 666
Score = 130 (50.8 bits), Expect = 3.4e-22, Sum P(3) = 3.4e-22
Identities = 52/201 (25%), Positives = 93/201 (46%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + ++
Sbjct: 644 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEM- 702
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
+ + K N AL K G + A + + + + C+ T+G + F +
Sbjct: 703 HAYMGKF-NQRGVDDALL-SLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFAST 760
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A Q+DS + AILQL +G+++++ WLT C + + S+L + +
Sbjct: 761 GYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVMS--SQLDIDN 817
Query: 741 FWGLFLICGIACFLALIFFFC 761
G+F + G A L+LI F C
Sbjct: 818 MAGVFYMLGAAMALSLITFIC 838
Score = 68 (29.0 bits), Expect = 3.4e-22, Sum P(3) = 3.4e-22
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
++S + +++ + IF VA S+G+T Y WI + D T P + T
Sbjct: 223 LQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTD-TVPSEFPT 275
>MGI|MGI:95821 [details] [associations]
symbol:Grin2b "glutamate receptor, ionotropic, NMDA2B (epsilon
2)" species:10090 "Mus musculus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001964 "startle response" evidence=IGI;IMP]
[GO:0001967 "suckling behavior" evidence=IMP] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISO] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IGI;IMP] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005149 "interleukin-1
receptor binding" evidence=ISO] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005261 "cation channel activity" evidence=IGI]
[GO:0005262 "calcium channel activity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0006812 "cation transport"
evidence=IGI] [GO:0006816 "calcium ion transport" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007423
"sensory organ development" evidence=IMP] [GO:0007611 "learning or
memory" evidence=TAS] [GO:0007612 "learning" evidence=IMP;IDA]
[GO:0007613 "memory" evidence=ISO;IMP;IDA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008021 "synaptic vesicle"
evidence=IDA] [GO:0008144 "drug binding" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008306 "associative learning"
evidence=ISO] [GO:0009790 "embryo development" evidence=IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0014049 "positive
regulation of glutamate secretion" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO;IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016594 "glycine binding" evidence=ISO] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IPI] [GO:0030018 "Z disc" evidence=ISO] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0031749 "D2 dopamine receptor
binding" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IGI;IMP] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IGI;IMP] [GO:0035255 "ionotropic
glutamate receptor binding" evidence=ISO] [GO:0042165
"neurotransmitter binding" evidence=ISO] [GO:0042596 "fear
response" evidence=IMP] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043083 "synaptic cleft" evidence=ISO] [GO:0043113 "receptor
clustering" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043408 "regulation of MAPK cascade" evidence=ISO] [GO:0045202
"synapse" evidence=ISO;IDA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] [GO:0045471 "response to ethanol" evidence=ISO;IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048167 "regulation
of synaptic plasticity" evidence=IMP] [GO:0048168 "regulation of
neuronal synaptic plasticity" evidence=TAS] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=ISO]
[GO:0048266 "behavioral response to pain" evidence=IMP] [GO:0048511
"rhythmic process" evidence=ISO] [GO:0050806 "positive regulation
of synaptic transmission" evidence=ISO] [GO:0050839 "cell adhesion
molecule binding" evidence=ISO] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=IMP] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IGI;IMP] [GO:0070588
"calcium ion transmembrane transport" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95821
GO:GO:0014069 GO:GO:0009986 GO:GO:0007423 GO:GO:0045471
GO:GO:0046872 GO:GO:0007613 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0007612 GO:GO:0008021 GO:GO:0048266
GO:GO:0050966 GO:GO:0008270 GO:GO:0001701 GO:GO:0001967
GO:GO:0060079 GO:GO:0042734 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0048168 GO:GO:0001964 GO:GO:0017146
GO:GO:0005234 eggNOG:NOG282132 GO:GO:0004972 HOVERGEN:HBG052635
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 CTD:2904
KO:K05210 OrthoDB:EOG4Z8XVM EMBL:D10651 EMBL:AK002963
IPI:IPI00321320 PIR:I49704 RefSeq:NP_032197.3 UniGene:Mm.436649
ProteinModelPortal:Q01097 SMR:Q01097 DIP:DIP-31568N IntAct:Q01097
MINT:MINT-135847 STRING:Q01097 PhosphoSite:Q01097 PaxDb:Q01097
PRIDE:Q01097 GeneID:14812 KEGG:mmu:14812 UCSC:uc009elq.1
InParanoid:Q01097 BindingDB:Q01097 ChEMBL:CHEMBL3442 NextBio:287003
Genevestigator:Q01097 GermOnline:ENSMUSG00000030209 Uniprot:Q01097
Length = 1482
Score = 203 (76.5 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 88/387 (22%), Positives = 168/387 (43%)
Query: 230 DSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFT 289
D + ++ A +L+E +F +PK S N R++ + L+ + F
Sbjct: 295 DGIAIITTAASDMLSE---HSFIPEPK-----SSCYNTHEKRIYQSNM-LNRYLINVTFE 345
Query: 290 GLSGEIRFDADKNLVNPAYDVLNIGGTGS-RRIGYWSNYSGLSV---VAPEILYTKPPNS 345
G + + F D ++P ++ + R+G W + S L + V P +
Sbjct: 346 GRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKS-LQMKYYVWPRMC--PETEE 400
Query: 346 SSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVK----G 401
+ HL S++ E V P +G +R VP + D+ P +K G
Sbjct: 401 QEDDHL-SIVTLEEAPFVIVESVDPLSGTCMRNTVPCQKRIISENKTDEEPGYIKKCCKG 459
Query: 402 YCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAVGDITIVTNR 459
+CID+ + + + + G +GK+ N +N ++ +V + + AVG +TI R
Sbjct: 460 FCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEER 519
Query: 460 TKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH 518
+++VDF+ P++E+G+ V+ SP AFL+PF+ +W++ L V AV V++ E+
Sbjct: 520 SEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEY 579
Query: 519 ----RFNN---EFRGP--PSQQLVTIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXX 567
+N + R P PS + W + +F + +N + +
Sbjct: 580 FSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFA 639
Query: 568 XXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ Q+ G+
Sbjct: 640 VIFLASYTANLAAFMIQEEYVDQVSGL 666
Score = 130 (50.8 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 52/201 (25%), Positives = 93/201 (46%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + ++
Sbjct: 644 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEM- 702
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
+ + K N AL K G + A + + + + C+ T+G + F +
Sbjct: 703 HAYMGKF-NQRGVDDALL-SLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFAST 760
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A Q+DS + AILQL +G+++++ WLT C + + S+L + +
Sbjct: 761 GYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVMS--SQLDIDN 817
Query: 741 FWGLFLICGIACFLALIFFFC 761
G+F + G A L+LI F C
Sbjct: 818 MAGVFYMLGAAMALSLITFIC 838
Score = 68 (29.0 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
++S + +++ + IF VA S+G+T Y WI + D T P + T
Sbjct: 223 LQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTD-TVPSEFPT 275
>RGD|2738 [details] [associations]
symbol:Grin2b "glutamate receptor, ionotropic, N-methyl D-aspartate
2B" species:10116 "Rattus norvegicus" [GO:0001101 "response to acid"
evidence=IEP] [GO:0001508 "regulation of action potential"
evidence=IMP] [GO:0001662 "behavioral fear response"
evidence=IEA;ISO] [GO:0001701 "in utero embryonic development"
evidence=IEA;ISO] [GO:0001964 "startle response" evidence=IEA;ISO]
[GO:0001967 "suckling behavior" evidence=IEA;ISO] [GO:0001975
"response to amphetamine" evidence=IEP] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA;ISO;IDA] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005149 "interleukin-1 receptor binding" evidence=IPI]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA;IDA] [GO:0005261 "cation channel activity" evidence=ISO]
[GO:0005262 "calcium channel activity" evidence=IEA;ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0006812 "cation transport"
evidence=ISO] [GO:0006816 "calcium ion transport" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=ISO] [GO:0007423
"sensory organ development" evidence=IEA;ISO] [GO:0007611 "learning
or memory" evidence=TAS] [GO:0007612 "learning" evidence=IEA;ISO]
[GO:0007613 "memory" evidence=IEA;ISO;IDA] [GO:0007616 "long-term
memory" evidence=IEP] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008021 "synaptic vesicle" evidence=IEA;ISO]
[GO:0008144 "drug binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IDA] [GO:0008306 "associative learning"
evidence=IMP] [GO:0009612 "response to mechanical stimulus"
evidence=IEP] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0009790 "embryo development" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010042 "response to
manganese ion" evidence=IEP] [GO:0010350 "cellular response to
magnesium starvation" evidence=IEP] [GO:0010942 "positive regulation
of cell death" evidence=IMP;IDA] [GO:0014049 "positive regulation of
glutamate secretion" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0014075 "response to amine stimulus"
evidence=IEP] [GO:0016020 "membrane" evidence=ISO] [GO:0016594
"glycine binding" evidence=IEA;ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=IEA;ISO;IDA]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0021987
"cerebral cortex development" evidence=IEP] [GO:0030018 "Z disc"
evidence=IDA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA] [GO:0031749
"D2 dopamine receptor binding" evidence=IPI] [GO:0032026 "response to
magnesium ion" evidence=IEP] [GO:0033555 "multicellular organismal
response to stress" evidence=IEP] [GO:0034097 "response to cytokine
stimulus" evidence=IEP] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0035255 "ionotropic glutamate receptor
binding" evidence=IPI] [GO:0042165 "neurotransmitter binding"
evidence=IDA] [GO:0042220 "response to cocaine" evidence=IEP]
[GO:0042596 "fear response" evidence=ISO] [GO:0042734 "presynaptic
membrane" evidence=ISO;IDA] [GO:0043005 "neuron projection"
evidence=ISO;IDA] [GO:0043083 "synaptic cleft" evidence=IDA]
[GO:0043113 "receptor clustering" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043408 "regulation of MAPK cascade" evidence=IMP] [GO:0045202
"synapse" evidence=ISO;IDA;TAS] [GO:0045211 "postsynaptic membrane"
evidence=IEA;ISO] [GO:0045471 "response to ethanol"
evidence=IEA;IEP;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0048167 "regulation of synaptic
plasticity" evidence=IEA;ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048266 "behavioral
response to pain" evidence=IEA;ISO] [GO:0048511 "rhythmic process"
evidence=IDA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0050839 "cell adhesion molecule
binding" evidence=IPI] [GO:0050966 "detection of mechanical stimulus
involved in sensory perception of pain" evidence=IEA;ISO] [GO:0051592
"response to calcium ion" evidence=IEP] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0051602 "response to electrical
stimulus" evidence=IEP] [GO:0051707 "response to other organism"
evidence=IEP] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=ISO] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA;ISO] [GO:0060416
"response to growth hormone stimulus" evidence=IEP] [GO:0060992
"response to fungicide" evidence=IEP] [GO:0070588 "calcium ion
transmembrane transport" evidence=ISO] [GO:0071230 "cellular response
to amino acid stimulus" evidence=IEP] [GO:0071287 "cellular response
to manganese ion" evidence=IEP] [GO:0071359 "cellular response to
dsRNA" evidence=IEP] [GO:0071363 "cellular response to growth factor
stimulus" evidence=IEP] [GO:0071396 "cellular response to lipid"
evidence=IEP] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2738
GO:GO:0021987 GO:GO:0021766 GO:GO:0014069 GO:GO:0009612 GO:GO:0030018
GO:GO:0071363 GO:GO:0007423 GO:GO:0051592 GO:GO:0045471 GO:GO:0060992
GO:GO:0046872 GO:GO:0008144 GO:GO:0042220 GO:GO:0005262 GO:GO:0030054
GO:GO:0045211 GO:GO:0008021 GO:GO:0048266 GO:GO:0050966 GO:GO:0051602
GO:GO:0008270 GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0007616
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0001975 GO:GO:0014049
GO:GO:0048511 GO:GO:0030288 GO:GO:0051707 GO:GO:0043083 GO:GO:0010942
GO:GO:0001508 GO:GO:0008306 GO:GO:0043113 GO:GO:0033555 GO:GO:0046982
GO:GO:0009743 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0051597 GO:GO:0060416 GO:GO:0071230 GO:GO:0071396 GO:GO:0001964
GO:GO:0050806 GO:GO:0032026 GO:GO:0010350 GO:GO:0071287 GO:GO:0017146
GO:GO:0042165 GO:GO:0043408 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0016594 GO:GO:0071359 GO:GO:0004972 HOVERGEN:HBG052635
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 TCDB:1.A.10.1.6
CTD:2904 KO:K05210 OrthoDB:EOG4Z8XVM EMBL:M91562 EMBL:U11419
IPI:IPI00326061 PIR:B43274 RefSeq:NP_036706.1 UniGene:Rn.9711
PDB:3JPW PDB:3JPY PDB:3QEL PDB:3QEM PDBsum:3JPW PDBsum:3JPY
PDBsum:3QEL PDBsum:3QEM ProteinModelPortal:Q00960 SMR:Q00960
DIP:DIP-33702N IntAct:Q00960 MINT:MINT-104014 STRING:Q00960
PhosphoSite:Q00960 PRIDE:Q00960 GeneID:24410 KEGG:rno:24410
UCSC:RGD:2738 InParanoid:Q00960 BindingDB:Q00960 ChEMBL:CHEMBL311
EvolutionaryTrace:Q00960 NextBio:603231 Genevestigator:Q00960
GermOnline:ENSRNOG00000008766 Uniprot:Q00960
Length = 1482
Score = 203 (76.5 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 88/387 (22%), Positives = 168/387 (43%)
Query: 230 DSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFT 289
D + ++ A +L+E +F +PK S N R++ + L+ + F
Sbjct: 295 DGIAIITTAASDMLSE---HSFIPEPK-----SSCYNTHEKRIYQSNM-LNRYLINVTFE 345
Query: 290 GLSGEIRFDADKNLVNPAYDVLNIGGTGS-RRIGYWSNYSGLSV---VAPEILYTKPPNS 345
G + + F D ++P ++ + R+G W + S L + V P +
Sbjct: 346 GRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKS-LQMKYYVWPRMC--PETEE 400
Query: 346 SSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVK----G 401
+ HL S++ E V P +G +R VP + D+ P +K G
Sbjct: 401 QEDDHL-SIVTLEEAPFVIVESVDPLSGTCMRNTVPCQKRIISENKTDEEPGYIKKCCKG 459
Query: 402 YCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAVGDITIVTNR 459
+CID+ + + + + G +GK+ N +N ++ +V + + AVG +TI R
Sbjct: 460 FCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEER 519
Query: 460 TKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH 518
+++VDF+ P++E+G+ V+ SP AFL+PF+ +W++ L V AV V++ E+
Sbjct: 520 SEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEY 579
Query: 519 ----RFNN---EFRGP--PSQQLVTIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXX 567
+N + R P PS + W + +F + +N + +
Sbjct: 580 FSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFA 639
Query: 568 XXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ Q+ G+
Sbjct: 640 VIFLASYTANLAAFMIQEEYVDQVSGL 666
Score = 130 (50.8 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 52/201 (25%), Positives = 93/201 (46%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + ++
Sbjct: 644 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEM- 702
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
+ + K N AL K G + A + + + + C+ T+G + F +
Sbjct: 703 HAYMGKF-NQRGVDDALL-SLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFAST 760
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A Q+DS + AILQL +G+++++ WLT C + + S+L + +
Sbjct: 761 GYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVMS--SQLDIDN 817
Query: 741 FWGLFLICGIACFLALIFFFC 761
G+F + G A L+LI F C
Sbjct: 818 MAGVFYMLGAAMALSLITFIC 838
Score = 68 (29.0 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
++S + +++ + IF VA S+G+T Y WI + D T P + T
Sbjct: 223 LQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTD-TVPSEFPT 275
>UNIPROTKB|Q00960 [details] [associations]
symbol:Grin2b "Glutamate receptor ionotropic, NMDA 2B"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2738 GO:GO:0021987
GO:GO:0021766 GO:GO:0014069 GO:GO:0009612 GO:GO:0030018
GO:GO:0071363 GO:GO:0007423 GO:GO:0051592 GO:GO:0045471
GO:GO:0060992 GO:GO:0046872 GO:GO:0008144 GO:GO:0042220
GO:GO:0005262 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0051602 GO:GO:0008270
GO:GO:0001701 GO:GO:0034097 GO:GO:0001967 GO:GO:0007616
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0001975
GO:GO:0014049 GO:GO:0048511 GO:GO:0030288 GO:GO:0051707
GO:GO:0043083 GO:GO:0010942 GO:GO:0001508 GO:GO:0008306
GO:GO:0043113 GO:GO:0033555 GO:GO:0046982 GO:GO:0009743
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0051597
GO:GO:0060416 GO:GO:0071230 GO:GO:0071396 GO:GO:0001964
GO:GO:0050806 GO:GO:0032026 GO:GO:0010350 GO:GO:0071287
GO:GO:0017146 GO:GO:0042165 GO:GO:0043408 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0016594 GO:GO:0071359 GO:GO:0004972
HOVERGEN:HBG052635 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 TCDB:1.A.10.1.6 CTD:2904 KO:K05210
OrthoDB:EOG4Z8XVM EMBL:M91562 EMBL:U11419 IPI:IPI00326061
PIR:B43274 RefSeq:NP_036706.1 UniGene:Rn.9711 PDB:3JPW PDB:3JPY
PDB:3QEL PDB:3QEM PDBsum:3JPW PDBsum:3JPY PDBsum:3QEL PDBsum:3QEM
ProteinModelPortal:Q00960 SMR:Q00960 DIP:DIP-33702N IntAct:Q00960
MINT:MINT-104014 STRING:Q00960 PhosphoSite:Q00960 PRIDE:Q00960
GeneID:24410 KEGG:rno:24410 UCSC:RGD:2738 InParanoid:Q00960
BindingDB:Q00960 ChEMBL:CHEMBL311 EvolutionaryTrace:Q00960
NextBio:603231 Genevestigator:Q00960 GermOnline:ENSRNOG00000008766
Uniprot:Q00960
Length = 1482
Score = 203 (76.5 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 88/387 (22%), Positives = 168/387 (43%)
Query: 230 DSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFT 289
D + ++ A +L+E +F +PK S N R++ + L+ + F
Sbjct: 295 DGIAIITTAASDMLSE---HSFIPEPK-----SSCYNTHEKRIYQSNM-LNRYLINVTFE 345
Query: 290 GLSGEIRFDADKNLVNPAYDVLNIGGTGS-RRIGYWSNYSGLSV---VAPEILYTKPPNS 345
G + + F D ++P ++ + R+G W + S L + V P +
Sbjct: 346 GRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKS-LQMKYYVWPRMC--PETEE 400
Query: 346 SSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVK----G 401
+ HL S++ E V P +G +R VP + D+ P +K G
Sbjct: 401 QEDDHL-SIVTLEEAPFVIVESVDPLSGTCMRNTVPCQKRIISENKTDEEPGYIKKCCKG 459
Query: 402 YCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAVGDITIVTNR 459
+CID+ + + + + G +GK+ N +N ++ +V + + AVG +TI R
Sbjct: 460 FCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEER 519
Query: 460 TKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH 518
+++VDF+ P++E+G+ V+ SP AFL+PF+ +W++ L V AV V++ E+
Sbjct: 520 SEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEY 579
Query: 519 ----RFNN---EFRGP--PSQQLVTIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXX 567
+N + R P PS + W + +F + +N + +
Sbjct: 580 FSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFA 639
Query: 568 XXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ Q+ G+
Sbjct: 640 VIFLASYTANLAAFMIQEEYVDQVSGL 666
Score = 130 (50.8 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 52/201 (25%), Positives = 93/201 (46%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + ++
Sbjct: 644 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEM- 702
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
+ + K N AL K G + A + + + + C+ T+G + F +
Sbjct: 703 HAYMGKF-NQRGVDDALL-SLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFAST 760
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A Q+DS + AILQL +G+++++ WLT C + + S+L + +
Sbjct: 761 GYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVMS--SQLDIDN 817
Query: 741 FWGLFLICGIACFLALIFFFC 761
G+F + G A L+LI F C
Sbjct: 818 MAGVFYMLGAAMALSLITFIC 838
Score = 68 (29.0 bits), Expect = 4.3e-22, Sum P(3) = 4.3e-22
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
++S + +++ + IF VA S+G+T Y WI + D T P + T
Sbjct: 223 LQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTD-TVPSEFPT 275
>UNIPROTKB|F1MCL3 [details] [associations]
symbol:GRIN2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0045471
"response to ethanol" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0016594 "glycine
binding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0007423 "sensory organ development" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001967 "suckling behavior" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0048167 GO:GO:0014069
GO:GO:0007423 GO:GO:0045471 GO:GO:0007613 GO:GO:0005262
GO:GO:0030054 GO:GO:0045211 GO:GO:0007612 GO:GO:0008021
GO:GO:0048266 GO:GO:0050966 GO:GO:0001701 GO:GO:0035235
GO:GO:0001967 GO:GO:0060079 GO:GO:0030288 GO:GO:0001662
InterPro:IPR001828 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0016594 GO:GO:0004972 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 CTD:2904 KO:K05210 OMA:CTNRSHL
EMBL:DAAA02014263 EMBL:DAAA02014253 EMBL:DAAA02014254
EMBL:DAAA02014255 EMBL:DAAA02014256 EMBL:DAAA02014257
EMBL:DAAA02014258 EMBL:DAAA02014259 EMBL:DAAA02014260
EMBL:DAAA02014261 EMBL:DAAA02014262 IPI:IPI00717585
RefSeq:NP_001179850.1 UniGene:Bt.61353 ProteinModelPortal:F1MCL3
Ensembl:ENSBTAT00000000263 GeneID:537804 KEGG:bta:537804
NextBio:20877218 Uniprot:F1MCL3
Length = 1497
Score = 203 (76.5 bits), Expect = 4.5e-22, Sum P(3) = 4.5e-22
Identities = 88/387 (22%), Positives = 168/387 (43%)
Query: 230 DSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFT 289
D + ++ A +L+E +F +PK S N R++ + L+ + F
Sbjct: 295 DGIAIITTAASDMLSE---HSFIPEPK-----SSCYNTHEKRIYQSNM-LNRYLINVTFE 345
Query: 290 GLSGEIRFDADKNLVNPAYDVLNIGGTGS-RRIGYWSNYSGLSV---VAPEILYTKPPNS 345
G + + F D ++P ++ + R+G W + S L + V P +
Sbjct: 346 GRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKS-LQMKYYVWPRMC--PETEE 400
Query: 346 SSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPGVK----G 401
+ HL S++ E V P +G +R VP + D+ P +K G
Sbjct: 401 QEDDHL-SIVTLEEAPFVIVESVDPLSGTCMRNTVPCQKRIISENKTDEEPGYIKKCCKG 459
Query: 402 YCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAVGDITIVTNR 459
+CID+ + + + + G +GK+ N +N ++ +V + + AVG +TI R
Sbjct: 460 FCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMAVGSLTINEER 519
Query: 460 TKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH 518
+++VDF+ P++E+G+ V+ SP AFL+PF+ +W++ L V AV V++ E+
Sbjct: 520 SEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIVSAVAVFVFEY 579
Query: 519 ----RFNN---EFRGP--PSQQLVTIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXX 567
+N + R P PS + W + +F + +N + +
Sbjct: 580 FSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFA 639
Query: 568 XXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ Q+ G+
Sbjct: 640 VIFLASYTANLAAFMIQEEYVDQVSGL 666
Score = 130 (50.8 bits), Expect = 4.5e-22, Sum P(3) = 4.5e-22
Identities = 52/201 (25%), Positives = 93/201 (46%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + ++
Sbjct: 644 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEM- 702
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
+ + K N AL K G + A + + + + C+ T+G + F +
Sbjct: 703 HAYMGKF-NQRGVDDALL-SLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFAST 760
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A Q+DS + AILQL +G+++++ WLT C + + S+L + +
Sbjct: 761 GYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVMS--SQLDIDN 817
Query: 741 FWGLFLICGIACFLALIFFFC 761
G+F + G A L+LI F C
Sbjct: 818 MAGVFYMLGAAMALSLITFIC 838
Score = 68 (29.0 bits), Expect = 4.5e-22, Sum P(3) = 4.5e-22
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
++S + +++ + IF VA S+G+T Y WI + D T P + T
Sbjct: 223 LQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTD-TVPSEFPT 275
>WB|WBGene00001613 [details] [associations]
symbol:glr-2 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 EMBL:FO080148
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 KO:K05313
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234372 EMBL:AF318606
PIR:T15306 RefSeq:NP_001021113.1 RefSeq:NP_001021114.1
UniGene:Cel.19346 ProteinModelPortal:Q10914 SMR:Q10914
STRING:Q10914 PaxDb:Q10914 PRIDE:Q10914 EnsemblMetazoa:B0280.12b
GeneID:175999 KEGG:cel:CELE_B0280.12 UCSC:B0280.12b CTD:175999
WormBase:B0280.12a WormBase:B0280.12b InParanoid:Q10914 OMA:MTPPIES
NextBio:890672 Uniprot:Q10914
Length = 977
Score = 180 (68.4 bits), Expect = 6.9e-22, Sum P(4) = 6.9e-22
Identities = 70/283 (24%), Positives = 130/283 (45%)
Query: 363 TPRGWVFPNNGMPLRIAVPNRVSYNEFVA-KDKSP--PGVKG------YCIDVFEA-AVN 412
T +G + P+ LR V V FV K ++P P +KG YCID+ A N
Sbjct: 475 TRKG-ILPSKPWQLRFNVVT-VLVKPFVMLKRRNPGEPELKGNDRFEGYCIDLLNLLAKN 532
Query: 413 L--LPYPV-PHNYIMYGNGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPY 469
+ Y V + YG+ + + ++ ++ + D AV +TI R + VDF++P+
Sbjct: 533 ITGFEYDVFISDGNKYGSRQADGSWDGMIGYLLNETADVAVAPLTITQERERAVDFSKPF 592
Query: 470 MESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVT-GGFF---LFVGAVVWILEHRFNNEF 524
M +G+ +++ +K + + ++F++P + +W+ T +F L + V W + EF
Sbjct: 593 MTTGISIMIKKPEKQEFNIFSFMEPLGMTIWIFTLSSYFGVSLTIFLVSWFSPYEKRIEF 652
Query: 525 -RGPPSQQ----LVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASL 578
RG + L WF+ + + ++ GR SSYTA+L
Sbjct: 653 KRGEFTVTNEFTLYNSLWFTLAAFMQQGTDILPRAVSGRIASSCWWFFTLIIVSSYTANL 712
Query: 579 TSILTVQQLTSQIEGIDSLISSTEPI-GVQDGSFAWNYLVDEL 620
+ LT++++T IE ++ L + + + GV +G + D +
Sbjct: 713 AAFLTLERMTPPIESVEDLANQNKILYGVNEGGSTAAFFEDSI 755
Score = 152 (58.6 bits), Expect = 6.9e-22, Sum P(4) = 6.9e-22
Identities = 38/100 (38%), Positives = 55/100 (55%)
Query: 668 CEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLS 727
C+ VGQ G+G A + +PL + L+ AIL LSE G+L+K+ NKW Y+ D
Sbjct: 826 CDTMKVGQNLNTLGYGIATKIGNPLRVSLNLAILYLSEKGELKKLENKWW-YDRGQCDTG 884
Query: 728 PADGG-GSRLSLKSFWGLF--LICGIACFL--ALIFFFCR 762
+DGG S L+L G+F L+ G+ + AL+ F R
Sbjct: 885 TSDGGTSSSLNLSKVAGIFYILLAGMVLSMCTALVEFLFR 924
Score = 56 (24.8 bits), Expect = 6.9e-22, Sum P(4) = 6.9e-22
Identities = 19/72 (26%), Positives = 34/72 (47%)
Query: 249 FTFSN-DPKLHDTNG---SMLNLSSLRVFD-GGQQFLQTLLRMNFTGLSGEIRFDADKNL 303
+ FSN D D +G S++N++ R+FD ++FL+T + G D+
Sbjct: 270 YVFSNFDVDETDLSGFHFSLINITIFRIFDKNNKKFLKTRAEFHDVYRGGFSNTDSIPTA 329
Query: 304 VNPAYDVLNIGG 315
A+D + + G
Sbjct: 330 AAFAHDAILVAG 341
Score = 50 (22.7 bits), Expect = 2.8e-21, Sum P(4) = 2.8e-21
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 225 ALYAYDSVWLVAHALDALLNEGGKFTF 251
A +A+D++ + AL +NE GK F
Sbjct: 330 AAFAHDAILVAGKALQIAMNEHGKGIF 356
Score = 49 (22.3 bits), Expect = 6.9e-22, Sum P(4) = 6.9e-22
Identities = 9/23 (39%), Positives = 16/23 (69%)
Query: 65 DLVEYYGWREVIAIFVDDDYGRN 87
D ++Y GWR+V+ ++ D G+N
Sbjct: 154 DYIQYKGWRDVV--YIHD--GKN 172
>UNIPROTKB|J9NWC8 [details] [associations]
symbol:GRIN1 "Glutamate receptor ionotropic, NMDA 1"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 InterPro:IPR018882 Pfam:PF10562
EMBL:AAEX03006734 Ensembl:ENSCAFT00000044506 Uniprot:J9NWC8
Length = 730
Score = 238 (88.8 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 82/349 (23%), Positives = 163/349 (46%)
Query: 427 NGKRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSS 486
N +N ++ ++ + D V +TI R + ++F++P+ GL ++ + +S+
Sbjct: 283 NNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRST 342
Query: 487 PWAFLKPFTIPMWLVTGGFFLFVGAVVWILEH-----RF--NNEFRGPPSQQLVTIFWFS 539
+F++PF +WL+ G V ++++L+ RF N+E + L + WFS
Sbjct: 343 LDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFS 402
Query: 540 FSTMFFSH-RENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDS- 596
+ + S E S R +SYTA+L + L + + +I GI+
Sbjct: 403 WGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDP 462
Query: 597 -LISSTEPI--GVQDGSFAWNYLVDELKIAES-RLVKLKNMEEYSIALARGPKGGGVAAI 652
L + ++ S Y +++++ R ++ N E + A+ + + + A
Sbjct: 463 RLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAI-QAVRDNKLHAF 521
Query: 653 VDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKI 712
+ + +E F + C+ T G+ F +SG+G ++DSP ++S +IL+ ENG ++ +
Sbjct: 522 IWDSAVLE-FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDL 580
Query: 713 HNKWLTYNEC-SMDLSPADGGGSRLSLKSFWGLFLIC--GIACFLALIF 758
W+ Y EC S +PA L+ ++ G+F++ GI + LIF
Sbjct: 581 DKTWVRYQECDSRSNAPAT-----LTFENMAGVFMLVAGGIVAGIFLIF 624
Score = 75 (31.5 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 125 ANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
A +E+RV ++ + D T++ A L MT YVW+
Sbjct: 3 ARELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWL 40
Score = 61 (26.5 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 29/118 (24%), Positives = 55/118 (46%)
Query: 219 SGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQ 278
+G N A + D+V +VA A+ LL K ++ P+ G + N + ++ G
Sbjct: 65 NGKNESA-HISDAVGVVAQAVHELLE---KENITDPPR-----GCVGNTN---IWKTGPL 112
Query: 279 FLQTLLRMNFT-GLSGEIRF--DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
F + L+ + G++G + F D D+ N Y ++N+ ++G Y+G V+
Sbjct: 113 FKRVLMSSKYADGVTGRVEFNEDGDRKFAN--YSIMNLQNRKLVQVGI---YNGTHVI 165
Score = 49 (22.3 bits), Expect = 1.1e-21, Sum P(4) = 1.1e-21
Identities = 8/14 (57%), Positives = 10/14 (71%)
Query: 354 VIWPGEITATPRGW 367
+IWPG T PRG+
Sbjct: 171 IIWPGGETEKPRGY 184
>UNIPROTKB|F1P0E1 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00681402 Ensembl:ENSGALT00000027749 Uniprot:F1P0E1
Length = 819
Score = 202 (76.2 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 74/248 (29%), Positives = 107/248 (43%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 506 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 565
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 566 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMKSAEPSVFTRTT 625
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + SPL +
Sbjct: 626 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSPLRTPV 685
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+LSE G L K+ NKW EC S + S LSL + G+F I G+A
Sbjct: 686 NLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGLA 745
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 746 MLVALIEF 753
Score = 192 (72.6 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 68/242 (28%), Positives = 114/242 (47%)
Query: 385 SYNEFVAKDKSPPGVKGYCIDVF-EAAVNL-LPYPVPHNYIMYGN-GKRNP---IYNDIV 438
+++ F DK +GYC+D+ E A ++ + Y + + G G R+P I+N +V
Sbjct: 350 NHDTFEGNDK----FEGYCVDLASEIAKHIGIKYKIA--IVPDGKYGARDPETKIWNGMV 403
Query: 439 QQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIP 497
++ K + AV +TI R +++DF++P+M G+ +++ QK K ++FL P
Sbjct: 404 GELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE 463
Query: 498 MWLVTGGFFLFVG-AVVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFS 541
+W+ F ++G +VV L RF+ E+ GP Q + WFS
Sbjct: 464 IWMCI--VFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLG 521
Query: 542 TMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISS 600
+ + SL GR SSYTA+L + LTV+++ S IE + L
Sbjct: 522 AFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQ 581
Query: 601 TE 602
TE
Sbjct: 582 TE 583
Score = 134 (52.2 bits), Expect = 4.3e-21, Sum P(2) = 4.3e-21
Identities = 68/294 (23%), Positives = 122/294 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYK--APFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + S++ A + ++
Sbjct: 58 ALLSLLDHYEWNRFVFLY-DTD---RGYSIL-QAIMEKAGQNSWQVSAICVENFNDASYR 112
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + + S+G Y +I + L S E
Sbjct: 113 RLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVAN-LGFKDISLERFMH 171
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + TP + + RWK L +E +P + S AL YD V ++
Sbjct: 172 GGANVT-GFQLVDFSTP---MVTKLMQRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 225
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 226 AETFRNLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNV 278
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
+FD VN DV + TG R++GYW++ L ++ E ++ NR
Sbjct: 279 QFDHYGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHEPTLGNDTSAMENR 332
Score = 37 (18.1 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 58 YQMHAVADLVEYYGWREVIAIFVDDDYG 85
Y + +++ ++ G + IAI D YG
Sbjct: 363 YCVDLASEIAKHIGIKYKIAIVPDGKYG 390
>UNIPROTKB|J9P2L9 [details] [associations]
symbol:GRIN2B "Glutamate receptor ionotropic, NMDA 2B"
species:9615 "Canis lupus familiaris" [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
InterPro:IPR018884 Pfam:PF10565 GeneTree:ENSGT00540000070221
OMA:CTNRSHL EMBL:AAEX03015244 Ensembl:ENSCAFT00000044471
Uniprot:J9P2L9
Length = 1513
Score = 194 (73.4 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 80/337 (23%), Positives = 152/337 (45%)
Query: 283 LLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGS-RRIGYWSNYSGLSV---VAPEIL 338
L+ + F G + + F D ++P ++ + R+G W + S L + V P +
Sbjct: 367 LINVTFEGRN--LSFSEDGYQMHPKLVIILLNKERKWERVGKWKDKS-LQMKYYVWPRMC 423
Query: 339 YTKPPNSSSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSP-- 396
+ HL S++ E V P +G +R VP + V+++K+
Sbjct: 424 --PETEEQEDDHL-SIVTLEEAPFVIVESVDPLSGTCMRNTVPCQ---KRIVSENKTDEE 477
Query: 397 PGV-----KGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAA 449
PG KG+CID+ + + + + G +GK+ N +N ++ +V + + A
Sbjct: 478 PGYIKKCCKGFCIDILKKISKSVKFTYDLYLVTNGKHGKKINGTWNGMIGEVVMKRAYMA 537
Query: 450 VGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFV 509
VG +TI R+++VDF+ P++E+G+ V+ SP AFL+PF+ +W++ L V
Sbjct: 538 VGSLTINEERSEVVDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVMLLIV 597
Query: 510 GAV-VWILEH----RFNN---EFRGP--PSQQLVTIFWFSFSTMFFSHR--ENTVSSLGR 557
AV V++ E+ +N + R P PS + W + +F + +N + +
Sbjct: 598 SAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSK 657
Query: 558 XXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ Q+ G+
Sbjct: 658 IMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGL 694
Score = 130 (50.8 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 52/201 (25%), Positives = 93/201 (46%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + ++
Sbjct: 672 ASYTANLAAFMIQEEYVDQVSGLSDKKFQRPNDFSPPFRFGTVPNGSTERNIRNNYAEM- 730
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
+ + K N AL K G + A + + + + C+ T+G + F +
Sbjct: 731 HAYMGKF-NQRGVDDALL-SLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFAST 788
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A Q+DS + AILQL +G+++++ WLT C + + S+L + +
Sbjct: 789 GYGIAIQKDSGWKRQVDLAILQLFGDGEMEELEALWLT-GICHNEKNEVMS--SQLDIDN 845
Query: 741 FWGLFLICGIACFLALIFFFC 761
G+F + G A L+LI F C
Sbjct: 846 MAGVFYMLGAAMALSLITFIC 866
Score = 68 (29.0 bits), Expect = 4.3e-21, Sum P(3) = 4.3e-21
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
++S + +++ + IF VA S+G+T Y WI + D T P + T
Sbjct: 223 LQSPIILLYCTKEEATYIFEVANSVGLTGYGYTWIVPSLVAGDTD-TVPSEFPT 275
>UNIPROTKB|J9P242 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2901 KO:K05205 OMA:NINSVME EMBL:AAEX03000923
RefSeq:XP_541594.4 Ensembl:ENSCAFT00000043369 GeneID:484480
KEGG:cfa:484480 Uniprot:J9P242
Length = 980
Score = 155 (59.6 bits), Expect = 5.7e-21, Sum P(3) = 5.7e-21
Identities = 52/199 (26%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ +E D L T G + + R+
Sbjct: 633 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 692
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELP--YIELFMS----KTNCEFRTVGQEFTKSGWGF 684
++ S+ + +G +A +++ +E M+ + NC +G G+G
Sbjct: 693 MQSKQPSVFVKSTEEG--IARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGI 750
Query: 685 AFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGL 744
SP +++ AILQL EN L+ + KW C + D L +++ G+
Sbjct: 751 GMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE---EDHRAKGLGMENIGGI 807
Query: 745 F--LICG--IACFLALIFF 759
F LICG IA F+A++ F
Sbjct: 808 FVVLICGLIIAVFVAVMEF 826
Score = 136 (52.9 bits), Expect = 5.7e-21, Sum P(3) = 5.7e-21
Identities = 35/132 (26%), Positives = 64/132 (48%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+G+C+D+ LL + + +YG + N + +V ++ K D AV TI
Sbjct: 444 EGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTIT 503
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQK-LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ V K ++FL PF+ +WL +L V V+++
Sbjct: 504 AEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFL 563
Query: 516 LEHRFNNEFRGP 527
E+ P
Sbjct: 564 AARLSPYEWYNP 575
Score = 95 (38.5 bits), Expect = 5.7e-21, Sum P(3) = 5.7e-21
Identities = 50/198 (25%), Positives = 79/198 (39%)
Query: 134 VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGVVALRH 193
++ N I A LGMT+ Y +I T +L V+ DT N+L G
Sbjct: 215 IIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGIVE-DTSNIL-GFSMFNT 272
Query: 194 HTPDTDLKKNFISRWKNLKYKEN-SPSGFNSYALYA---YDSVWLVAHALDALLNEGGKF 249
P F+ R N+ ++EN S + AL A +D+V +V A+ L
Sbjct: 273 SHP---FYPEFV-RSLNMSWRENCEASTYPGPALSAALMFDAVHVVVSAVREL------- 321
Query: 250 TFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYD 309
N + + L +S ++ G + L + + GL+G + F++ N
Sbjct: 322 ---N--RSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLR 376
Query: 310 VLNIGGTGSRRIGYW-SN 326
+L G R IG W SN
Sbjct: 377 ILEKSRQGHREIGVWYSN 394
Score = 85 (35.0 bits), Expect = 2.2e-19, Sum P(4) = 2.2e-19
Identities = 69/299 (23%), Positives = 119/299 (39%)
Query: 5 VVAAIGPQSS-GIAHVISHVVNELNVPLLSFGATD-PTLTSLQYPYFLRTTQSDYYQMHA 62
VV+ +GP SS A +SH+ E +P + G + P L L++ ++ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 63 VADLVEYYGWREVIAIFVDDD-YGRNGISVLGDALSKKRAKISYKAPF-SPGASRSAINS 120
V+ +++ + + I + R V G +SK+ + P I
Sbjct: 149 VSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPTPLLKEIRD 208
Query: 121 LLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDID 180
V ++++ + H+ I A LGMT+ Y +I T +L V+ D
Sbjct: 209 DKVSTIIIDANASISHL-------ILRKASELGMTSAFYKYILTTMDFPILHLDGIVE-D 260
Query: 181 TMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKEN-SPSGFNSYALYA---YDSVWLVA 236
T N+L G P F+ R N+ ++EN S + AL A +D+V +V
Sbjct: 261 TSNIL-GFSMFNTSHP---FYPEFV-RSLNMSWRENCEASTYPGPALSAALMFDAVHVVV 315
Query: 237 HALDALLNE---GGKFTFSNDPKLHDTNGSMLNLSSLRVFDG--GQ-QFLQTLLRMNFT 289
A+ L G K + S++N + +DG G+ +F R N+T
Sbjct: 316 SAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYT 374
Score = 38 (18.4 bits), Expect = 2.2e-19, Sum P(4) = 2.2e-19
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 285 RMNFTGLSGEIRFD 298
R NF LSG RF+
Sbjct: 431 RPNFQALSGNERFE 444
>ZFIN|ZDB-GENE-070822-3 [details] [associations]
symbol:grin2ca "glutamate receptor, ionotropic,
N-methyl D-aspartate 2Ca" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-070822-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:BX546473 EMBL:CU464067
IPI:IPI00932733 RefSeq:XP_002661175.2 Ensembl:ENSDART00000110554
Ensembl:ENSDART00000145215 GeneID:100329743 KEGG:dre:100329743
Uniprot:E7FH62
Length = 1400
Score = 192 (72.6 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 88/359 (24%), Positives = 156/359 (43%)
Query: 261 NGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIG-GTGSR 319
+G M LS +R G + L N + + + F++D LVNP+ ++ + G
Sbjct: 323 DGHMDCLSPIRPASNGTLYRHML---NVSWENTDFSFNSDGYLVNPSMIIITLDRGRQWD 379
Query: 320 RIG-YWSNYSGLSV-VAPEI-LYTKPPNSSSNRHLYSVIWPGEITATPRGWVFPNNGMPL 376
++G Y S + V P + +P S NRHL +V E V P G L
Sbjct: 380 KVGNYESGILQMRYPVWPRYGTFLEPV--SDNRHL-TVATLEERPFVIVEAVDPVTGTCL 436
Query: 377 RIAVPNRVSYN--EFVAKDKSPPG---VKGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRN 431
VP R N E + P KG+CID+ + + + ++ + NGK
Sbjct: 437 SNTVPCRRQSNKTETIVGHTEPYTKLCCKGFCIDILKKLSRNIKFS--YDLYLVTNGKHG 494
Query: 432 P----IYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSP 487
I+N ++ +V + D A+G +TI R++++DF+ P++E+G+ V+ SP
Sbjct: 495 KLVRGIWNGMIGEVFYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNGTVSP 554
Query: 488 WAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEF-----RGPPSQQLVTIFW 537
AFL+P++ +W++ L V AV V++ E+ +N G P+ + W
Sbjct: 555 SAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYCSPVGYNRSLVSAKDPGGPTFTIGKSVW 614
Query: 538 FSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ +F + EN + + +SYTA+L + + +Q + G+
Sbjct: 615 LLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGL 673
Score = 126 (49.4 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 52/199 (26%), Positives = 90/199 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISSTE---P---IG-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + +Q + G+ D + P G V +GS N + ++
Sbjct: 651 ASYTANLAAFMIQEQYIDTVSGLSDKKFQKPQDQYPPFRFGTVPNGSTERNIRSNYPEM- 709
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
S +VK N + AL K G + A + + + K C+ T+G + F +
Sbjct: 710 HSHMVKY-NQKGVEDAL-NSLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATT 767
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A Q++S + A+LQ +GD QK+ WLT C + S+L + +
Sbjct: 768 GYGIALQKESRWKRPIDLALLQFLADGDTQKLQTVWLT-GICRNEKKEVMS--SKLDIDN 824
Query: 741 FWGLFLICGIACFLALIFF 759
G+F + +A L+L+ F
Sbjct: 825 MAGVFYMLLVAMGLSLLVF 843
Score = 70 (29.7 bits), Expect = 8.6e-21, Sum P(3) = 8.6e-21
Identities = 28/154 (18%), Positives = 63/154 (40%)
Query: 13 SSGIAHVISHVVNELNVPLLSF-GATDPTLTSL-QYPYFLRTTQSDYYQMHAVADLVEYY 70
S +A ++ + + VP++ G + L FL+ S Q++ + ++E Y
Sbjct: 110 SEAVAQILDFISTQTAVPIVGISGGSAVVLPHKGDGSTFLQLGSSIEQQINGMFKVMEEY 169
Query: 71 GWRE-VIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLVGANL-- 127
W V+ + Y + + + + + S +N L L
Sbjct: 170 NWDSFVVVTSLYPGYDTY-VDYIRSFIDTSYFLWELQDTLTFDMSADGMNDLRARRLLQQ 228
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVW 161
++++V +V+ + D +FS+A+ +G+ Y+W
Sbjct: 229 IDAQVLLVYCSHDEAQYLFSMAREVGLVGPGYIW 262
>UNIPROTKB|Q38PU0 [details] [associations]
symbol:GRIK5 "KA2" species:9541 "Macaca fascicularis"
[GO:0005622 "intracellular" evidence=IDA] [GO:0030424 "axon"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0030424 GO:GO:0043197
GO:GO:0035235 GO:GO:0005622 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159937
ProteinModelPortal:Q38PU0 Uniprot:Q38PU0
Length = 891
Score = 155 (59.6 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 52/199 (26%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ +E D L T G + + R+
Sbjct: 633 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 692
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELP--YIELFMS----KTNCEFRTVGQEFTKSGWGF 684
++ S+ + +G +A +++ +E M+ + NC +G G+G
Sbjct: 693 MQSKQPSVFVKSTEEG--IARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGI 750
Query: 685 AFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGL 744
SP +++ AILQL EN L+ + KW C + D L +++ G+
Sbjct: 751 GMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE---EDHRAKGLGMENIGGI 807
Query: 745 F--LICG--IACFLALIFF 759
F LICG IA F+A++ F
Sbjct: 808 FVVLICGLIIAVFVAVMEF 826
Score = 136 (52.9 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 35/132 (26%), Positives = 64/132 (48%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+G+C+D+ LL + + +YG + N + +V ++ K D AV TI
Sbjct: 444 EGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTIT 503
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQK-LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ V K ++FL PF+ +WL +L V V+++
Sbjct: 504 AEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFL 563
Query: 516 LEHRFNNEFRGP 527
E+ P
Sbjct: 564 AARLSPYEWYNP 575
Score = 91 (37.1 bits), Expect = 1.0e-20, Sum P(3) = 1.0e-20
Identities = 49/198 (24%), Positives = 79/198 (39%)
Query: 134 VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGVVALRH 193
++ N I A LGMT+ Y +I T +L V+ D+ N+L G
Sbjct: 215 IIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGIVE-DSSNIL-GFSMFNT 272
Query: 194 HTPDTDLKKNFISRWKNLKYKEN-SPSGFNSYALYA---YDSVWLVAHALDALLNEGGKF 249
P F+ R N+ ++EN S + AL A +D+V +V A+ L
Sbjct: 273 SHP---FYPEFV-RSLNMSWRENCEASTYPGPALSAALMFDAVHVVVSAVREL------- 321
Query: 250 TFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYD 309
N + + L +S ++ G + L + + GL+G + F++ N
Sbjct: 322 ---N--RSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLR 376
Query: 310 VLNIGGTGSRRIGYW-SN 326
+L G R IG W SN
Sbjct: 377 ILEKSRQGHREIGVWYSN 394
Score = 81 (33.6 bits), Expect = 3.5e-19, Sum P(4) = 3.5e-19
Identities = 68/299 (22%), Positives = 119/299 (39%)
Query: 5 VVAAIGPQSS-GIAHVISHVVNELNVPLLSFGATD-PTLTSLQYPYFLRTTQSDYYQMHA 62
VV+ +GP SS A +SH+ E +P + G + P L L++ ++ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 63 VADLVEYYGWREVIAIFVDDD-YGRNGISVLGDALSKKRAKISYKAPF-SPGASRSAINS 120
V+ +++ + + I + R V G +SK+ + P I
Sbjct: 149 VSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPTPLLKEIRD 208
Query: 121 LLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDID 180
V ++++ + H+ I A LGMT+ Y +I T +L V+ D
Sbjct: 209 DKVSTIIIDANASISHL-------ILRKASELGMTSAFYKYILTTMDFPILHLDGIVE-D 260
Query: 181 TMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKEN-SPSGFNSYALYA---YDSVWLVA 236
+ N+L G P F+ R N+ ++EN S + AL A +D+V +V
Sbjct: 261 SSNIL-GFSMFNTSHP---FYPEFV-RSLNMSWRENCEASTYPGPALSAALMFDAVHVVV 315
Query: 237 HALDALLNE---GGKFTFSNDPKLHDTNGSMLNLSSLRVFDG--GQ-QFLQTLLRMNFT 289
A+ L G K + S++N + +DG G+ +F R N+T
Sbjct: 316 SAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYT 374
Score = 38 (18.4 bits), Expect = 3.5e-19, Sum P(4) = 3.5e-19
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 285 RMNFTGLSGEIRFD 298
R NF LSG RF+
Sbjct: 431 RPNFQALSGNERFE 444
>UNIPROTKB|F1LNE4 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 IPI:IPI00952011 ProteinModelPortal:F1LNE4
Ensembl:ENSRNOT00000067113 ArrayExpress:F1LNE4 Uniprot:F1LNE4
Length = 756
Score = 185 (70.2 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 316 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 373
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 374 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 431
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 432 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 491
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 492 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 538
Score = 174 (66.3 bits), Expect = 1.8e-19, Sum P(3) = 1.8e-19
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 472 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 531
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 532 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 591
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 592 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG 651
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 652 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 708
Score = 143 (55.4 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 8 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYR 66
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 67 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 118
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 119 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTATIKYTSALTYDAV 177
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 178 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 229
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 230 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 275
Score = 49 (22.3 bits), Expect = 1.2e-20, Sum P(3) = 1.2e-20
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N N PS S +
Sbjct: 705 LIEFCYKSRAEAKRMKVAKNPQNINPSSSQN 735
>UNIPROTKB|F1MK58 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:DAAA02044901 EMBL:DAAA02044902 IPI:IPI00705733
ProteinModelPortal:F1MK58 Ensembl:ENSBTAT00000006271 Uniprot:F1MK58
Length = 883
Score = 185 (70.2 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 443 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 500
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 501 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 558
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 618
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 665
Score = 184 (69.8 bits), Expect = 1.8e-20, Sum P(3) = 1.8e-20
Identities = 69/237 (29%), Positives = 101/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 599 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 658
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 659 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+LSE G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQG 778
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC S + S LSL + G+F I G+A +ALI F
Sbjct: 779 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 835
Score = 143 (55.4 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 135 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYR 193
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 194 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 245
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 246 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTTTIKYTSALTYDAV 304
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 305 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 356
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 357 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 402
Score = 51 (23.0 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N PS S +
Sbjct: 832 LIEFCYKSRAEAKRMKVAKNAQNINPSSSQN 862
>MGI|MGI:95809 [details] [associations]
symbol:Gria2 "glutamate receptor, ionotropic, AMPA2 (alpha 2)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO;IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007268
"synaptic transmission" evidence=ISO;IDA] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0014069 "postsynaptic density"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030672 "synaptic vesicle membrane" evidence=ISO]
[GO:0031623 "receptor internalization" evidence=ISO] [GO:0032279
"asymmetric synapse" evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032839 "dendrite
cytoplasm" evidence=ISO] [GO:0034220 "ion transmembrane transport"
evidence=IDA] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043197 "dendritic spine"
evidence=ISO] [GO:0043198 "dendritic shaft" evidence=ISO]
[GO:0043204 "perikaryon" evidence=ISO] [GO:0043234 "protein
complex" evidence=ISO] [GO:0045184 "establishment of protein
localization" evidence=ISO] [GO:0045202 "synapse" evidence=ISO;IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051966
"regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95809 GO:GO:0005789
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0008021
GO:GO:0043005 GO:GO:0032281 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2891 KO:K05198 OrthoDB:EOG4TB49K EMBL:X57498
EMBL:L32204 EMBL:L32189 EMBL:L32190 EMBL:L32192 EMBL:L32194
EMBL:L32196 EMBL:L32198 EMBL:L32200 EMBL:L32202 EMBL:L32203
EMBL:L32201 EMBL:L32199 EMBL:L32197 EMBL:L32195 EMBL:L32193
EMBL:L32191 EMBL:L32372 EMBL:AK014389 EMBL:AK043490 EMBL:AK044574
EMBL:AK046861 IPI:IPI00136967 IPI:IPI00466699 IPI:IPI00608015
IPI:IPI00845711 PIR:I49695 PIR:I49696 RefSeq:NP_001034284.1
RefSeq:NP_001077275.1 RefSeq:NP_038568.2 UniGene:Mm.220224
ProteinModelPortal:P23819 SMR:P23819 IntAct:P23819
MINT:MINT-1776844 STRING:P23819 PhosphoSite:P23819 PaxDb:P23819
PRIDE:P23819 GeneID:14800 KEGG:mmu:14800 UCSC:uc008pnz.1
UCSC:uc008pof.1 BindingDB:P23819 ChEMBL:CHEMBL3205 NextBio:286957
CleanEx:MM_GRIA2 Genevestigator:P23819
GermOnline:ENSMUSG00000033981 Uniprot:P23819
Length = 883
Score = 185 (70.2 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 443 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 500
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 501 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 558
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 618
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 665
Score = 175 (66.7 bits), Expect = 1.7e-19, Sum P(3) = 1.7e-19
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 599 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 658
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 659 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVLKLNEQG 778
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 835
Score = 143 (55.4 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 135 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYR 193
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 194 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 245
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 246 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTATIKYTSALTYDAV 304
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 305 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 356
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 357 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 402
Score = 51 (23.0 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N PS S +
Sbjct: 832 LIEFCYKSRAEAKRMKVAKNAQNINPSSSQN 862
>UNIPROTKB|F1MBY1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:DAAA02044901 EMBL:DAAA02044902 IPI:IPI00908138
Ensembl:ENSBTAT00000056038 Uniprot:F1MBY1
Length = 883
Score = 185 (70.2 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 443 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 500
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 501 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 558
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 618
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 665
Score = 174 (66.3 bits), Expect = 2.2e-19, Sum P(3) = 2.2e-19
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 599 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 658
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 659 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG 778
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 835
Score = 143 (55.4 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 135 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYR 193
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 194 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 245
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 246 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTTTIKYTSALTYDAV 304
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 305 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 356
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 357 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 402
Score = 51 (23.0 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N PS S +
Sbjct: 832 LIEFCYKSRAEAKRMKVAKNAQNINPSSSQN 862
>UNIPROTKB|A8MT92 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0060992 GO:GO:0007268 GO:GO:0043198
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0032279
GO:GO:0042734 GO:GO:0043195 GO:GO:0030672 GO:GO:0032281
GO:GO:0030426 GO:GO:0032839 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOGENOM:HOG000234372 HOVERGEN:HBG051839
HGNC:HGNC:4572 OrthoDB:EOG4TB49K EMBL:AC079233 EMBL:AC112240
IPI:IPI00789563 SMR:A8MT92 STRING:A8MT92 Ensembl:ENST00000393815
Ensembl:ENST00000449365 Ensembl:ENST00000507898 UCSC:uc011cit.2
Uniprot:A8MT92
Length = 836
Score = 185 (70.2 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 396 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 453
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 454 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 511
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 512 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 571
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 572 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 618
Score = 184 (69.8 bits), Expect = 1.8e-20, Sum P(3) = 1.8e-20
Identities = 69/237 (29%), Positives = 101/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 552 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 611
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 612 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 671
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+LSE G
Sbjct: 672 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQG 731
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC S + S LSL + G+F I G+A +ALI F
Sbjct: 732 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 788
Score = 142 (55.0 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 88 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMYR 146
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 147 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 198
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 199 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTTTIKYTSALTYDAV 257
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 258 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 309
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 310 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 355
Score = 51 (23.0 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N PS S +
Sbjct: 785 LIEFCYKSRAEAKRMKVAKNAQNINPSSSQN 815
>UNIPROTKB|Q38PU7 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9541 "Macaca
fascicularis" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005789 GO:GO:0030054
GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 HSSP:P19491
EMBL:DQ159930 ProteinModelPortal:Q38PU7 SMR:Q38PU7 Uniprot:Q38PU7
Length = 883
Score = 185 (70.2 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 443 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 500
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 501 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 558
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMRQGCDISPRSLS 618
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 665
Score = 175 (66.7 bits), Expect = 2.1e-19, Sum P(3) = 2.1e-19
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 599 WFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 658
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 659 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVLKLNEQG 778
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 835
Score = 142 (55.0 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 135 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMYR 193
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 194 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 245
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 246 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTTTIKYTSALTYDAV 304
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 305 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 356
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 357 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 402
Score = 51 (23.0 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N PS S +
Sbjct: 832 LIEFCYKSRAEAKRMKVAKNAQNINPSSSQN 862
>UNIPROTKB|P42262 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0005887
"integral to plasma membrane" evidence=ISS] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IDA] [GO:0007165
"signal transduction" evidence=TAS] [GO:0008066 "glutamate receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0005789
GO:GO:0060992 GO:GO:0007268 GO:GO:0043198 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0032279 GO:GO:0042734
GO:GO:0043195 DrugBank:DB00142 GO:GO:0030672 GO:GO:0032281
GO:GO:0030426 GO:GO:0032839 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 EMBL:L20814 EMBL:BC010574
IPI:IPI00030882 IPI:IPI00219216 IPI:IPI00871510 PIR:I58181
RefSeq:NP_000817.2 RefSeq:NP_001077088.1 RefSeq:NP_001077089.1
UniGene:Hs.32763 PDB:2WJW PDB:2WJX PDB:2XHD PDB:3R7X PDB:3RN8
PDB:3RNN PDB:3UA8 PDBsum:2WJW PDBsum:2WJX PDBsum:2XHD PDBsum:3R7X
PDBsum:3RN8 PDBsum:3RNN PDBsum:3UA8 ProteinModelPortal:P42262
SMR:P42262 DIP:DIP-42852N IntAct:P42262 MINT:MINT-2791741
STRING:P42262 PhosphoSite:P42262 DMDM:23831146 PaxDb:P42262
PRIDE:P42262 Ensembl:ENST00000264426 Ensembl:ENST00000296526
GeneID:2891 KEGG:hsa:2891 UCSC:uc003ipm.4 CTD:2891
GeneCards:GC04P158141 HGNC:HGNC:4572 HPA:CAB006830 HPA:CAB007812
HPA:CAB012981 HPA:HPA008441 MIM:138247 neXtProt:NX_P42262
PharmGKB:PA28967 KO:K05198 OMA:HAVPYVS OrthoDB:EOG4TB49K
BindingDB:P42262 ChEMBL:CHEMBL4016 EvolutionaryTrace:P42262
GenomeRNAi:2891 NextBio:11429 ArrayExpress:P42262 Bgee:P42262
CleanEx:HS_GRIA2 Genevestigator:P42262 GermOnline:ENSG00000120251
Uniprot:P42262
Length = 883
Score = 185 (70.2 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 443 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 500
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 501 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 558
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 618
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 665
Score = 174 (66.3 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 599 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 658
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 659 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG 778
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 835
Score = 142 (55.0 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 135 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMYR 193
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 194 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 245
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 246 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTTTIKYTSALTYDAV 304
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 305 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 356
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 357 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 402
Score = 51 (23.0 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N PS S +
Sbjct: 832 LIEFCYKSRAEAKRMKVAKNAQNINPSSSQN 862
>MGI|MGI:95818 [details] [associations]
symbol:Grik5 "glutamate receptor, ionotropic, kainate 5 (gamma
2)" species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007165
"signal transduction" evidence=ISO] [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0008066 "glutamate receptor
activity" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=ISO] [GO:0014069 "postsynaptic density"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO;IGI] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017124 "SH3
domain binding" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0030424 "axon" evidence=ISO] [GO:0030425 "dendrite"
evidence=ISO] [GO:0031630 "regulation of synaptic vesicle fusion to
presynaptic membrane" evidence=IMP] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IMP] [GO:0042391
"regulation of membrane potential" evidence=IGI] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043113 "receptor clustering" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043204 "perikaryon"
evidence=ISO] [GO:0043525 "positive regulation of neuron apoptotic
process" evidence=ISO] [GO:0045202 "synapse" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IDA] [GO:0051649
"establishment of localization in cell" evidence=ISO] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:95818 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0060079 GO:GO:0042734
GO:GO:0035249 InterPro:IPR001828 EMBL:CH466593 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2901 KO:K05205
OMA:NINSVME OrthoDB:EOG4RV2QP GO:GO:0031630 EMBL:D10011
EMBL:AC125468 IPI:IPI00123538 PIR:JH0589 RefSeq:NP_032194.2
UniGene:Mm.2879 ProteinModelPortal:Q61626 IntAct:Q61626
STRING:Q61626 PhosphoSite:Q61626 PaxDb:Q61626 PRIDE:Q61626
Ensembl:ENSMUST00000003468 GeneID:14809 KEGG:mmu:14809
InParanoid:Q61626 ChiTaRS:GRIK5 NextBio:286991
Genevestigator:Q61626 GermOnline:ENSMUSG00000003378 Uniprot:Q61626
Length = 979
Score = 155 (59.6 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 52/199 (26%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ +E D L T G + + R+
Sbjct: 633 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 692
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELP--YIELFMS----KTNCEFRTVGQEFTKSGWGF 684
++ S+ + +G +A +++ +E M+ + NC +G G+G
Sbjct: 693 MQSKQPSVFVKSTEEG--IARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGI 750
Query: 685 AFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGL 744
SP +++ AILQL EN L+ + KW C + D L +++ G+
Sbjct: 751 GMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE---EDHRAKGLGMENIGGI 807
Query: 745 F--LICG--IACFLALIFF 759
F LICG IA F+A++ F
Sbjct: 808 FVVLICGLIIAVFVAVMEF 826
Score = 136 (52.9 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 35/132 (26%), Positives = 64/132 (48%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+G+C+D+ LL + + +YG + N + +V ++ K D AV TI
Sbjct: 444 EGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTIT 503
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQK-LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ V K ++FL PF+ +WL +L V V+++
Sbjct: 504 AEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFL 563
Query: 516 LEHRFNNEFRGP 527
E+ P
Sbjct: 564 AARLSPYEWYNP 575
Score = 90 (36.7 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 48/198 (24%), Positives = 79/198 (39%)
Query: 134 VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGVVALRH 193
++ N + A LGMT+ Y +I T +L V+ D+ N+L G
Sbjct: 215 IIDANASISHLVLRKASELGMTSAFYKYILTTMDFPILHLDGIVE-DSSNIL-GFSMFNT 272
Query: 194 HTPDTDLKKNFISRWKNLKYKEN-SPSGFNSYALYA---YDSVWLVAHALDALLNEGGKF 249
P F+ R N+ ++EN S + AL A +D+V +V A+ L
Sbjct: 273 SHP---FYPEFV-RSLNMSWRENCEASTYPGPALSAALMFDAVHVVVSAVREL------- 321
Query: 250 TFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYD 309
N + + L +S ++ G + L + + GL+G + F++ N
Sbjct: 322 ---N--RSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLR 376
Query: 310 VLNIGGTGSRRIGYW-SN 326
+L G R IG W SN
Sbjct: 377 ILEKSRQGHREIGVWYSN 394
Score = 80 (33.2 bits), Expect = 7.0e-19, Sum P(4) = 7.0e-19
Identities = 67/299 (22%), Positives = 119/299 (39%)
Query: 5 VVAAIGPQSS-GIAHVISHVVNELNVPLLSFGATD-PTLTSLQYPYFLRTTQSDYYQMHA 62
VV+ +GP SS A +SH+ E +P + G + P L L++ ++ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 63 VADLVEYYGWREVIAIFVDDD-YGRNGISVLGDALSKKRAKISYKAPF-SPGASRSAINS 120
V+ +++ + + I + R V G +SK+ + P I
Sbjct: 149 VSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPTPLLKEIRD 208
Query: 121 LLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDID 180
V ++++ + H+ + A LGMT+ Y +I T +L V+ D
Sbjct: 209 DKVSTIIIDANASISHL-------VLRKASELGMTSAFYKYILTTMDFPILHLDGIVE-D 260
Query: 181 TMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKEN-SPSGFNSYALYA---YDSVWLVA 236
+ N+L G P F+ R N+ ++EN S + AL A +D+V +V
Sbjct: 261 SSNIL-GFSMFNTSHP---FYPEFV-RSLNMSWRENCEASTYPGPALSAALMFDAVHVVV 315
Query: 237 HALDALLNE---GGKFTFSNDPKLHDTNGSMLNLSSLRVFDG--GQ-QFLQTLLRMNFT 289
A+ L G K + S++N + +DG G+ +F R N+T
Sbjct: 316 SAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYT 374
Score = 38 (18.4 bits), Expect = 7.0e-19, Sum P(4) = 7.0e-19
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 285 RMNFTGLSGEIRFD 298
R NF LSG RF+
Sbjct: 431 RPNFQALSGNERFE 444
>RGD|2735 [details] [associations]
symbol:Grik5 "glutamate receptor, ionotropic, kainate 5"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006621 "protein
retention in ER lumen" evidence=IMP] [GO:0007268 "synaptic
transmission" evidence=IDA] [GO:0008066 "glutamate receptor activity"
evidence=IDA] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IDA] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0017124
"SH3 domain binding" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IPI]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA;ISO] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA;ISO] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISO] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA;ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0042734
"presynaptic membrane" evidence=IEA;ISO] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043113 "receptor clustering" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043204 "perikaryon" evidence=IDA]
[GO:0043525 "positive regulation of neuron apoptotic process"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
[GO:0051649 "establishment of localization in cell" evidence=IMP]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:0071333 "cellular response to
glucose stimulus" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2735 GO:GO:0014069
GO:GO:0043525 GO:GO:0071333 GO:GO:0017124 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0035249 GO:GO:0043113 GO:GO:0051649 GO:GO:0006621
InterPro:IPR001828 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 GO:GO:0032983 PDB:3QLU PDB:3QLV PDBsum:3QLU PDBsum:3QLV
CTD:2901 KO:K05205 OMA:NINSVME OrthoDB:EOG4RV2QP GO:GO:0031630
EMBL:Z11581 EMBL:U08258 IPI:IPI00207006 PIR:JH0592 RefSeq:NP_113696.1
UniGene:Rn.74042 PDB:3OM0 PDB:3OM1 PDBsum:3OM0 PDBsum:3OM1
ProteinModelPortal:Q63273 SMR:Q63273 STRING:Q63273 PhosphoSite:Q63273
PRIDE:Q63273 Ensembl:ENSRNOT00000027578 GeneID:24407 KEGG:rno:24407
UCSC:RGD:2735 InParanoid:Q63273 BindingDB:Q63273 ChEMBL:CHEMBL4041
NextBio:603217 Genevestigator:Q63273 GermOnline:ENSRNOG00000020310
Uniprot:Q63273
Length = 979
Score = 155 (59.6 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 52/199 (26%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ +E D L T G + + R+
Sbjct: 633 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 692
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELP--YIELFMS----KTNCEFRTVGQEFTKSGWGF 684
++ S+ + +G +A +++ +E M+ + NC +G G+G
Sbjct: 693 MQSKQPSVFVKSTEEG--IARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGI 750
Query: 685 AFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGL 744
SP +++ AILQL EN L+ + KW C + D L +++ G+
Sbjct: 751 GMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE---EDHRAKGLGMENIGGI 807
Query: 745 F--LICG--IACFLALIFF 759
F LICG IA F+A++ F
Sbjct: 808 FVVLICGLIIAVFVAVMEF 826
Score = 136 (52.9 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 35/132 (26%), Positives = 64/132 (48%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+G+C+D+ LL + + +YG + N + +V ++ K D AV TI
Sbjct: 444 EGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTIT 503
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQK-LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ V K ++FL PF+ +WL +L V V+++
Sbjct: 504 AEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFL 563
Query: 516 LEHRFNNEFRGP 527
E+ P
Sbjct: 564 AARLSPYEWYNP 575
Score = 90 (36.7 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 48/198 (24%), Positives = 79/198 (39%)
Query: 134 VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGVVALRH 193
++ N + A LGMT+ Y +I T +L V+ D+ N+L G
Sbjct: 215 IIDANASISHLVLRKASELGMTSAFYKYILTTMDFPILHLDGIVE-DSSNIL-GFSMFNT 272
Query: 194 HTPDTDLKKNFISRWKNLKYKEN-SPSGFNSYALYA---YDSVWLVAHALDALLNEGGKF 249
P F+ R N+ ++EN S + AL A +D+V +V A+ L
Sbjct: 273 SHP---FYPEFV-RSLNMSWRENCEASTYPGPALSAALMFDAVHVVVSAVREL------- 321
Query: 250 TFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYD 309
N + + L +S ++ G + L + + GL+G + F++ N
Sbjct: 322 ---N--RSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLR 376
Query: 310 VLNIGGTGSRRIGYW-SN 326
+L G R IG W SN
Sbjct: 377 ILEKSRQGHREIGVWYSN 394
Score = 80 (33.2 bits), Expect = 7.0e-19, Sum P(4) = 7.0e-19
Identities = 67/299 (22%), Positives = 119/299 (39%)
Query: 5 VVAAIGPQSS-GIAHVISHVVNELNVPLLSFGATD-PTLTSLQYPYFLRTTQSDYYQMHA 62
VV+ +GP SS A +SH+ E +P + G + P L L++ ++ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 63 VADLVEYYGWREVIAIFVDDD-YGRNGISVLGDALSKKRAKISYKAPF-SPGASRSAINS 120
V+ +++ + + I + R V G +SK+ + P I
Sbjct: 149 VSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPTPLLKEIRD 208
Query: 121 LLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDID 180
V ++++ + H+ + A LGMT+ Y +I T +L V+ D
Sbjct: 209 DKVSTIIIDANASISHL-------VLRKASELGMTSAFYKYILTTMDFPILHLDGIVE-D 260
Query: 181 TMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKEN-SPSGFNSYALYA---YDSVWLVA 236
+ N+L G P F+ R N+ ++EN S + AL A +D+V +V
Sbjct: 261 SSNIL-GFSMFNTSHP---FYPEFV-RSLNMSWRENCEASTYPGPALSAALMFDAVHVVV 315
Query: 237 HALDALLNE---GGKFTFSNDPKLHDTNGSMLNLSSLRVFDG--GQ-QFLQTLLRMNFT 289
A+ L G K + S++N + +DG G+ +F R N+T
Sbjct: 316 SAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYT 374
Score = 38 (18.4 bits), Expect = 7.0e-19, Sum P(4) = 7.0e-19
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 285 RMNFTGLSGEIRFD 298
R NF LSG RF+
Sbjct: 431 RPNFQALSGNERFE 444
>UNIPROTKB|Q16478 [details] [associations]
symbol:GRIK5 "Glutamate receptor ionotropic, kainate 5"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0006621 "protein
retention in ER lumen" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017124 "SH3 domain binding"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IEA]
[GO:0031630 "regulation of synaptic vesicle fusion to presynaptic
membrane" evidence=IEA] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043113 "receptor clustering" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0043204 "perikaryon"
evidence=IEA] [GO:0043525 "positive regulation of neuron apoptotic
process" evidence=IEA] [GO:0051649 "establishment of localization
in cell" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0071333
"cellular response to glucose stimulus" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=NAS;TAS] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0071333 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0030425 GO:GO:0043204 GO:GO:0060079
GO:GO:0042734 GO:GO:0043195 GO:GO:0035249 EMBL:CH471126
DrugBank:DB00142 GO:GO:0043113 GO:GO:0051649 GO:GO:0006621
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983
CleanEx:HS_GRIK2 EMBL:S40369 EMBL:AJ249209 IPI:IPI00103335
IPI:IPI00293288 PIR:I57936 RefSeq:NP_002079.3 UniGene:Hs.367799
ProteinModelPortal:Q16478 SMR:Q16478 IntAct:Q16478
MINT:MINT-1427286 STRING:Q16478 PhosphoSite:Q16478 DMDM:209572626
PRIDE:Q16478 DNASU:2901 Ensembl:ENST00000262895
Ensembl:ENST00000301218 GeneID:2901 KEGG:hsa:2901 UCSC:uc002osi.1
CTD:2901 GeneCards:GC19M042502 H-InvDB:HIX0022359
H-InvDB:HIX0027521 HGNC:HGNC:4583 MIM:600283 neXtProt:NX_Q16478
PharmGKB:PA28977 KO:K05205 OMA:NINSVME OrthoDB:EOG4RV2QP
BindingDB:Q16478 ChEMBL:CHEMBL2675 GenomeRNAi:2901 NextBio:11483
Bgee:Q16478 CleanEx:HS_GRIK5 Genevestigator:Q16478
GermOnline:ENSG00000105737 GO:GO:0031630 Uniprot:Q16478
Length = 980
Score = 155 (59.6 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 52/199 (26%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ +E D L T G + + R+
Sbjct: 633 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 692
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELP--YIELFMS----KTNCEFRTVGQEFTKSGWGF 684
++ S+ + +G +A +++ +E M+ + NC +G G+G
Sbjct: 693 MQSKQPSVFVKSTEEG--IARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGI 750
Query: 685 AFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGL 744
SP +++ AILQL EN L+ + KW C + D L +++ G+
Sbjct: 751 GMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE---EDHRAKGLGMENIGGI 807
Query: 745 F--LICG--IACFLALIFF 759
F LICG IA F+A++ F
Sbjct: 808 FIVLICGLIIAVFVAVMEF 826
Score = 136 (52.9 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 35/132 (26%), Positives = 64/132 (48%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+G+C+D+ LL + + +YG + N + +V ++ K D AV TI
Sbjct: 444 EGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRKADLAVAAFTIT 503
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQK-LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ V K ++FL PF+ +WL +L V V+++
Sbjct: 504 AEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFL 563
Query: 516 LEHRFNNEFRGP 527
E+ P
Sbjct: 564 AARLSPYEWYNP 575
Score = 90 (36.7 bits), Expect = 1.9e-20, Sum P(3) = 1.9e-20
Identities = 49/198 (24%), Positives = 79/198 (39%)
Query: 134 VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGVVALRH 193
++ N I A LGMT+ Y +I T +L V+ D+ N+L G
Sbjct: 215 IIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGIVE-DSSNIL-GFSMFNT 272
Query: 194 HTPDTDLKKNFISRWKNLKYKEN-SPSGFNSYALYA---YDSVWLVAHALDALLNEGGKF 249
P F+ R N+ ++EN S + AL A +D+V +V A+ L
Sbjct: 273 SHP---FYPEFV-RSLNMSWRENCEASTYLGPALSAALMFDAVHVVVSAVREL------- 321
Query: 250 TFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYD 309
N + + L +S ++ G + L + + GL+G + F++ N
Sbjct: 322 ---N--RSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLR 376
Query: 310 VLNIGGTGSRRIGYW-SN 326
+L G R IG W SN
Sbjct: 377 ILEKSRQGHREIGVWYSN 394
Score = 80 (33.2 bits), Expect = 7.1e-19, Sum P(4) = 7.1e-19
Identities = 68/299 (22%), Positives = 119/299 (39%)
Query: 5 VVAAIGPQSS-GIAHVISHVVNELNVPLLSFGATD-PTLTSLQYPYFLRTTQSDYYQMHA 62
VV+ +GP SS A +SH+ E +P + G + P L L++ ++ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 63 VADLVEYYGWREVIAIFVDDD-YGRNGISVLGDALSKKRAKISYKAPF-SPGASRSAINS 120
V+ +++ + + I + R V G +SK+ + P I
Sbjct: 149 VSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPTPLLKEIRD 208
Query: 121 LLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDID 180
V ++++ + H+ I A LGMT+ Y +I T +L V+ D
Sbjct: 209 DKVSTIIIDANASISHL-------ILRKASELGMTSAFYKYILTTMDFPILHLDGIVE-D 260
Query: 181 TMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKEN-SPSGFNSYALYA---YDSVWLVA 236
+ N+L G P F+ R N+ ++EN S + AL A +D+V +V
Sbjct: 261 SSNIL-GFSMFNTSHP---FYPEFV-RSLNMSWRENCEASTYLGPALSAALMFDAVHVVV 315
Query: 237 HALDALLNE---GGKFTFSNDPKLHDTNGSMLNLSSLRVFDG--GQ-QFLQTLLRMNFT 289
A+ L G K + S++N + +DG G+ +F R N+T
Sbjct: 316 SAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYT 374
Score = 38 (18.4 bits), Expect = 7.1e-19, Sum P(4) = 7.1e-19
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 285 RMNFTGLSGEIRFD 298
R NF LSG RF+
Sbjct: 431 RPNFQALSGNERFE 444
>UNIPROTKB|G3V914 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 EMBL:CH473976 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 UniGene:Rn.91361
ProteinModelPortal:G3V914 Ensembl:ENSRNOT00000039587 Uniprot:G3V914
Length = 883
Score = 185 (70.2 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 443 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 500
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 501 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 558
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 618
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 665
Score = 184 (69.8 bits), Expect = 2.8e-20, Sum P(3) = 2.8e-20
Identities = 69/237 (29%), Positives = 101/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 599 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 658
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 659 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+LSE G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQG 778
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC S + S LSL + G+F I G+A +ALI F
Sbjct: 779 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 835
Score = 143 (55.4 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 135 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYR 193
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 194 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 245
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 246 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTATIKYTSALTYDAV 304
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 305 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 356
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 357 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 402
Score = 49 (22.3 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N N PS S +
Sbjct: 832 LIEFCYKSRAEAKRMKVAKNPQNINPSSSQN 862
>RGD|61862 [details] [associations]
symbol:Gria2 "glutamate receptor, ionotropic, AMPA 2"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO;IDA;TAS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;ISO] [GO:0005246 "calcium channel regulator activity"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=ISO;IDA] [GO:0008021 "synaptic
vesicle" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=TAS] [GO:0010226 "response to lithium ion"
evidence=IEP] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030165 "PDZ domain binding" evidence=IDA;IPI]
[GO:0030425 "dendrite" evidence=IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030672 "synaptic vesicle membrane" evidence=IDA]
[GO:0031623 "receptor internalization" evidence=IDA] [GO:0032279
"asymmetric synapse" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032839 "dendrite
cytoplasm" evidence=IDA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;ISS] [GO:0042734 "presynaptic membrane"
evidence=IDA] [GO:0043005 "neuron projection" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0043197 "dendritic spine" evidence=IDA]
[GO:0043198 "dendritic shaft" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA;IPI]
[GO:0045184 "establishment of protein localization" evidence=IMP]
[GO:0045202 "synapse" evidence=ISO;IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0051262 "protein tetramerization"
evidence=IDA] [GO:0051966 "regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0060992 "response to fungicide"
evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0014069
GO:GO:0051262 GO:GO:0005789 GO:GO:0060992 GO:GO:0010226
GO:GO:0007268 GO:GO:0043198 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0032279 GO:GO:0042734 GO:GO:0043195
GO:GO:0030672 GO:GO:0032281 GO:GO:0030426 GO:GO:0045184
GO:GO:0031623 GO:GO:0001919 GO:GO:0032839 GO:GO:0030165
InterPro:IPR001828 DrugBank:DB00606 GO:GO:0050806 GO:GO:0051966
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 CTD:2891 KO:K05198 EMBL:M36419
EMBL:M38061 EMBL:M85035 EMBL:X54655 EMBL:AF164344 IPI:IPI00231061
IPI:IPI00324625 IPI:IPI00876626 PIR:S13677 RefSeq:NP_001077280.1
RefSeq:NP_058957.1 UniGene:Rn.91361 PDB:1FTJ PDB:1FTK PDB:1FTL
PDB:1FTM PDB:1FTO PDB:1FW0 PDB:1GR2 PDB:1LB8 PDB:1LB9 PDB:1LBB
PDB:1LBC PDB:1M5B PDB:1M5C PDB:1M5D PDB:1M5E PDB:1M5F PDB:1MM6
PDB:1MM7 PDB:1MQD PDB:1MQG PDB:1MQH PDB:1MQI PDB:1MQJ PDB:1MS7
PDB:1MXU PDB:1MXV PDB:1MXW PDB:1MXX PDB:1MXY PDB:1MXZ PDB:1MY0
PDB:1MY1 PDB:1MY2 PDB:1MY3 PDB:1MY4 PDB:1N0T PDB:1NNK PDB:1NNP
PDB:1P1N PDB:1P1O PDB:1P1Q PDB:1P1U PDB:1P1W PDB:1SYH PDB:1SYI
PDB:1WVJ PDB:1XHY PDB:2AIX PDB:2AL4 PDB:2AL5 PDB:2ANJ PDB:2CMO
PDB:2GFE PDB:2I3V PDB:2I3W PDB:2P2A PDB:2UXA PDB:2XX7 PDB:2XX8
PDB:2XX9 PDB:2XXH PDB:2XXI PDB:3B6Q PDB:3B6T PDB:3B6W PDB:3B7D
PDB:3BBR PDB:3BFT PDB:3BFU PDB:3BKI PDB:3DP6 PDB:3H03 PDB:3H06
PDB:3H5V PDB:3H5W PDB:3H6T PDB:3H6U PDB:3H6V PDB:3H6W PDB:3HSY
PDB:3IJO PDB:3IJX PDB:3IK6 PDB:3IL1 PDB:3ILT PDB:3ILU PDB:3KG2
PDB:3KGC PDB:3LSF PDB:3LSL PDB:3M3L PDB:3N6V PDB:3O28 PDB:3O29
PDB:3O2A PDB:3O2J PDB:3O6G PDB:3O6H PDB:3O6I PDB:3PD8 PDB:3PD9
PDB:3PMV PDB:3PMW PDB:3PMX PDB:3RTF PDB:3RTW PDB:3T93 PDB:3T96
PDB:3T9H PDB:3T9U PDB:3T9V PDB:3T9X PDB:3TDJ PDB:3TKD PDB:3TZA
PDB:4FAT PDB:4G8M PDB:4GXS PDBsum:1FTJ PDBsum:1FTK PDBsum:1FTL
PDBsum:1FTM PDBsum:1FTO PDBsum:1FW0 PDBsum:1GR2 PDBsum:1LB8
PDBsum:1LB9 PDBsum:1LBB PDBsum:1LBC PDBsum:1M5B PDBsum:1M5C
PDBsum:1M5D PDBsum:1M5E PDBsum:1M5F PDBsum:1MM6 PDBsum:1MM7
PDBsum:1MQD PDBsum:1MQG PDBsum:1MQH PDBsum:1MQI PDBsum:1MQJ
PDBsum:1MS7 PDBsum:1MXU PDBsum:1MXV PDBsum:1MXW PDBsum:1MXX
PDBsum:1MXY PDBsum:1MXZ PDBsum:1MY0 PDBsum:1MY1 PDBsum:1MY2
PDBsum:1MY3 PDBsum:1MY4 PDBsum:1N0T PDBsum:1NNK PDBsum:1NNP
PDBsum:1P1N PDBsum:1P1O PDBsum:1P1Q PDBsum:1P1U PDBsum:1P1W
PDBsum:1SYH PDBsum:1SYI PDBsum:1WVJ PDBsum:1XHY PDBsum:2AIX
PDBsum:2AL4 PDBsum:2AL5 PDBsum:2ANJ PDBsum:2CMO PDBsum:2GFE
PDBsum:2I3V PDBsum:2I3W PDBsum:2P2A PDBsum:2UXA PDBsum:2XX7
PDBsum:2XX8 PDBsum:2XX9 PDBsum:2XXH PDBsum:2XXI PDBsum:3B6Q
PDBsum:3B6T PDBsum:3B6W PDBsum:3B7D PDBsum:3BBR PDBsum:3BFT
PDBsum:3BFU PDBsum:3BKI PDBsum:3DP6 PDBsum:3H03 PDBsum:3H06
PDBsum:3H5V PDBsum:3H5W PDBsum:3H6T PDBsum:3H6U PDBsum:3H6V
PDBsum:3H6W PDBsum:3HSY PDBsum:3IJO PDBsum:3IJX PDBsum:3IK6
PDBsum:3IL1 PDBsum:3ILT PDBsum:3ILU PDBsum:3KG2 PDBsum:3KGC
PDBsum:3LSF PDBsum:3LSL PDBsum:3M3L PDBsum:3N6V PDBsum:3O28
PDBsum:3O29 PDBsum:3O2A PDBsum:3O2J PDBsum:3O6G PDBsum:3O6H
PDBsum:3O6I PDBsum:3PD8 PDBsum:3PD9 PDBsum:3PMV PDBsum:3PMW
PDBsum:3PMX PDBsum:3RTF PDBsum:3RTW PDBsum:3T93 PDBsum:3T96
PDBsum:3T9H PDBsum:3T9U PDBsum:3T9V PDBsum:3T9X PDBsum:3TDJ
PDBsum:3TKD PDBsum:3TZA PDBsum:4FAT PDBsum:4G8M PDBsum:4GXS
ProteinModelPortal:P19491 SMR:P19491 DIP:DIP-30952N IntAct:P19491
MINT:MINT-86056 STRING:P19491 PhosphoSite:P19491 PRIDE:P19491
GeneID:29627 KEGG:rno:29627 UCSC:RGD:61862 BindingDB:P19491
ChEMBL:CHEMBL3503 EvolutionaryTrace:P19491 NextBio:609842
ArrayExpress:P19491 Genevestigator:P19491
GermOnline:ENSRNOG00000028589 Uniprot:P19491
Length = 883
Score = 185 (70.2 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 443 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 500
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 501 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 558
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 618
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 665
Score = 175 (66.7 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 599 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 658
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 659 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVLKLNEQG 778
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 835
Score = 143 (55.4 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 135 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYR 193
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 194 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 245
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 246 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTATIKYTSALTYDAV 304
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 305 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 356
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 357 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 402
Score = 49 (22.3 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N N PS S +
Sbjct: 832 LIEFCYKSRAEAKRMKVAKNPQNINPSSSQN 862
>UNIPROTKB|P19491 [details] [associations]
symbol:Gria2 "Glutamate receptor 2" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0014069 GO:GO:0051262
GO:GO:0005789 GO:GO:0060992 GO:GO:0010226 GO:GO:0007268
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0032279 GO:GO:0042734 GO:GO:0043195 GO:GO:0030672
GO:GO:0032281 GO:GO:0030426 GO:GO:0045184 GO:GO:0031623
GO:GO:0001919 GO:GO:0032839 GO:GO:0030165 InterPro:IPR001828
DrugBank:DB00606 GO:GO:0050806 GO:GO:0051966 eggNOG:NOG316680
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2891 KO:K05198 EMBL:M36419 EMBL:M38061
EMBL:M85035 EMBL:X54655 EMBL:AF164344 IPI:IPI00231061
IPI:IPI00324625 IPI:IPI00876626 PIR:S13677 RefSeq:NP_001077280.1
RefSeq:NP_058957.1 UniGene:Rn.91361 PDB:1FTJ PDB:1FTK PDB:1FTL
PDB:1FTM PDB:1FTO PDB:1FW0 PDB:1GR2 PDB:1LB8 PDB:1LB9 PDB:1LBB
PDB:1LBC PDB:1M5B PDB:1M5C PDB:1M5D PDB:1M5E PDB:1M5F PDB:1MM6
PDB:1MM7 PDB:1MQD PDB:1MQG PDB:1MQH PDB:1MQI PDB:1MQJ PDB:1MS7
PDB:1MXU PDB:1MXV PDB:1MXW PDB:1MXX PDB:1MXY PDB:1MXZ PDB:1MY0
PDB:1MY1 PDB:1MY2 PDB:1MY3 PDB:1MY4 PDB:1N0T PDB:1NNK PDB:1NNP
PDB:1P1N PDB:1P1O PDB:1P1Q PDB:1P1U PDB:1P1W PDB:1SYH PDB:1SYI
PDB:1WVJ PDB:1XHY PDB:2AIX PDB:2AL4 PDB:2AL5 PDB:2ANJ PDB:2CMO
PDB:2GFE PDB:2I3V PDB:2I3W PDB:2P2A PDB:2UXA PDB:2XX7 PDB:2XX8
PDB:2XX9 PDB:2XXH PDB:2XXI PDB:3B6Q PDB:3B6T PDB:3B6W PDB:3B7D
PDB:3BBR PDB:3BFT PDB:3BFU PDB:3BKI PDB:3DP6 PDB:3H03 PDB:3H06
PDB:3H5V PDB:3H5W PDB:3H6T PDB:3H6U PDB:3H6V PDB:3H6W PDB:3HSY
PDB:3IJO PDB:3IJX PDB:3IK6 PDB:3IL1 PDB:3ILT PDB:3ILU PDB:3KG2
PDB:3KGC PDB:3LSF PDB:3LSL PDB:3M3L PDB:3N6V PDB:3O28 PDB:3O29
PDB:3O2A PDB:3O2J PDB:3O6G PDB:3O6H PDB:3O6I PDB:3PD8 PDB:3PD9
PDB:3PMV PDB:3PMW PDB:3PMX PDB:3RTF PDB:3RTW PDB:3T93 PDB:3T96
PDB:3T9H PDB:3T9U PDB:3T9V PDB:3T9X PDB:3TDJ PDB:3TKD PDB:3TZA
PDB:4FAT PDB:4G8M PDB:4GXS PDBsum:1FTJ PDBsum:1FTK PDBsum:1FTL
PDBsum:1FTM PDBsum:1FTO PDBsum:1FW0 PDBsum:1GR2 PDBsum:1LB8
PDBsum:1LB9 PDBsum:1LBB PDBsum:1LBC PDBsum:1M5B PDBsum:1M5C
PDBsum:1M5D PDBsum:1M5E PDBsum:1M5F PDBsum:1MM6 PDBsum:1MM7
PDBsum:1MQD PDBsum:1MQG PDBsum:1MQH PDBsum:1MQI PDBsum:1MQJ
PDBsum:1MS7 PDBsum:1MXU PDBsum:1MXV PDBsum:1MXW PDBsum:1MXX
PDBsum:1MXY PDBsum:1MXZ PDBsum:1MY0 PDBsum:1MY1 PDBsum:1MY2
PDBsum:1MY3 PDBsum:1MY4 PDBsum:1N0T PDBsum:1NNK PDBsum:1NNP
PDBsum:1P1N PDBsum:1P1O PDBsum:1P1Q PDBsum:1P1U PDBsum:1P1W
PDBsum:1SYH PDBsum:1SYI PDBsum:1WVJ PDBsum:1XHY PDBsum:2AIX
PDBsum:2AL4 PDBsum:2AL5 PDBsum:2ANJ PDBsum:2CMO PDBsum:2GFE
PDBsum:2I3V PDBsum:2I3W PDBsum:2P2A PDBsum:2UXA PDBsum:2XX7
PDBsum:2XX8 PDBsum:2XX9 PDBsum:2XXH PDBsum:2XXI PDBsum:3B6Q
PDBsum:3B6T PDBsum:3B6W PDBsum:3B7D PDBsum:3BBR PDBsum:3BFT
PDBsum:3BFU PDBsum:3BKI PDBsum:3DP6 PDBsum:3H03 PDBsum:3H06
PDBsum:3H5V PDBsum:3H5W PDBsum:3H6T PDBsum:3H6U PDBsum:3H6V
PDBsum:3H6W PDBsum:3HSY PDBsum:3IJO PDBsum:3IJX PDBsum:3IK6
PDBsum:3IL1 PDBsum:3ILT PDBsum:3ILU PDBsum:3KG2 PDBsum:3KGC
PDBsum:3LSF PDBsum:3LSL PDBsum:3M3L PDBsum:3N6V PDBsum:3O28
PDBsum:3O29 PDBsum:3O2A PDBsum:3O2J PDBsum:3O6G PDBsum:3O6H
PDBsum:3O6I PDBsum:3PD8 PDBsum:3PD9 PDBsum:3PMV PDBsum:3PMW
PDBsum:3PMX PDBsum:3RTF PDBsum:3RTW PDBsum:3T93 PDBsum:3T96
PDBsum:3T9H PDBsum:3T9U PDBsum:3T9V PDBsum:3T9X PDBsum:3TDJ
PDBsum:3TKD PDBsum:3TZA PDBsum:4FAT PDBsum:4G8M PDBsum:4GXS
ProteinModelPortal:P19491 SMR:P19491 DIP:DIP-30952N IntAct:P19491
MINT:MINT-86056 STRING:P19491 PhosphoSite:P19491 PRIDE:P19491
GeneID:29627 KEGG:rno:29627 UCSC:RGD:61862 BindingDB:P19491
ChEMBL:CHEMBL3503 EvolutionaryTrace:P19491 NextBio:609842
ArrayExpress:P19491 Genevestigator:P19491
GermOnline:ENSRNOG00000028589 Uniprot:P19491
Length = 883
Score = 185 (70.2 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 443 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 500
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 501 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 558
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 618
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 665
Score = 175 (66.7 bits), Expect = 2.7e-19, Sum P(3) = 2.7e-19
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 599 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 658
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 659 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVLKLNEQG 778
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 835
Score = 143 (55.4 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 135 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYR 193
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 194 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 245
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 246 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTATIKYTSALTYDAV 304
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 305 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 356
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 357 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 402
Score = 49 (22.3 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N N PS S +
Sbjct: 832 LIEFCYKSRAEAKRMKVAKNPQNINPSSSQN 862
>UNIPROTKB|G3V938 [details] [associations]
symbol:Gria2 "Glutamate receptor, ionotropic, AMPA2,
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61862 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
EMBL:CH473976 GO:GO:0005234 GO:GO:0004970 UniGene:Rn.91361
ProteinModelPortal:G3V938 Ensembl:ENSRNOT00000039610 Uniprot:G3V938
Length = 883
Score = 185 (70.2 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 443 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 500
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 501 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 558
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 618
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 665
Score = 174 (66.3 bits), Expect = 3.5e-19, Sum P(3) = 3.5e-19
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 599 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 658
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 659 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG 778
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 779 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 835
Score = 143 (55.4 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 135 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYR 193
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 194 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 245
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 246 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTATIKYTSALTYDAV 304
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 305 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 356
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 357 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 402
Score = 49 (22.3 bits), Expect = 2.2e-20, Sum P(3) = 2.2e-20
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N N PS S +
Sbjct: 832 LIEFCYKSRAEAKRMKVAKNPQNINPSSSQN 862
>UNIPROTKB|F1N982 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00821478 ProteinModelPortal:F1N982
Ensembl:ENSGALT00000036434 Uniprot:F1N982
Length = 819
Score = 195 (73.7 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 72/248 (29%), Positives = 106/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 506 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 565
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 566 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMKSAEPSVFTRTT 625
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + SPL +
Sbjct: 626 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSPLRNAV 685
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 686 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 745
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 746 MLVALIEF 753
Score = 192 (72.6 bits), Expect = 5.2e-20, Sum P(2) = 5.2e-20
Identities = 68/242 (28%), Positives = 114/242 (47%)
Query: 385 SYNEFVAKDKSPPGVKGYCIDVF-EAAVNL-LPYPVPHNYIMYGN-GKRNP---IYNDIV 438
+++ F DK +GYC+D+ E A ++ + Y + + G G R+P I+N +V
Sbjct: 350 NHDTFEGNDK----FEGYCVDLASEIAKHIGIKYKIA--IVPDGKYGARDPETKIWNGMV 403
Query: 439 QQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIP 497
++ K + AV +TI R +++DF++P+M G+ +++ QK K ++FL P
Sbjct: 404 GELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE 463
Query: 498 MWLVTGGFFLFVG-AVVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFS 541
+W+ F ++G +VV L RF+ E+ GP Q + WFS
Sbjct: 464 IWMCI--VFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLG 521
Query: 542 TMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISS 600
+ + SL GR SSYTA+L + LTV+++ S IE + L
Sbjct: 522 AFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQ 581
Query: 601 TE 602
TE
Sbjct: 582 TE 583
Score = 134 (52.2 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 68/294 (23%), Positives = 122/294 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYK--APFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + S++ A + ++
Sbjct: 58 ALLSLLDHYEWNRFVFLY-DTD---RGYSIL-QAIMEKAGQNSWQVSAICVENFNDASYR 112
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + + S+G Y +I + L S E
Sbjct: 113 RLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVAN-LGFKDISLERFMH 171
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + TP + + RWK L +E +P + S AL YD V ++
Sbjct: 172 GGANVT-GFQLVDFSTP---MVTKLMQRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 225
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 226 AETFRNLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNV 278
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
+FD VN DV + TG R++GYW++ L ++ E ++ NR
Sbjct: 279 QFDHYGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHEPTLGNDTSAMENR 332
Score = 37 (18.1 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 58 YQMHAVADLVEYYGWREVIAIFVDDDYG 85
Y + +++ ++ G + IAI D YG
Sbjct: 363 YCVDLASEIAKHIGIKYKIAIVPDGKYG 390
>UNIPROTKB|F8W7L6 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4572
EMBL:AC079233 EMBL:AC112240 IPI:IPI01012058
ProteinModelPortal:F8W7L6 SMR:F8W7L6 Ensembl:ENST00000323661
ArrayExpress:F8W7L6 Bgee:F8W7L6 Uniprot:F8W7L6
Length = 730
Score = 185 (70.2 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 396 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 453
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 454 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 511
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 512 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 571
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 572 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 618
Score = 142 (55.0 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 88 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMYR 146
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 147 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 198
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 199 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTTTIKYTSALTYDAV 257
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 258 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 309
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 310 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 355
Score = 97 (39.2 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 42/166 (25%), Positives = 65/166 (39%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 552 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 611
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 612 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 671
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLA 693
G A + E E + C+ VG G+G A + S L+
Sbjct: 672 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLS 717
>UNIPROTKB|F1P0E2 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:AADN02005016 EMBL:AADN02005017
EMBL:AADN02005018 IPI:IPI00581692 ProteinModelPortal:F1P0E2
Ensembl:ENSGALT00000027747 Uniprot:F1P0E2
Length = 902
Score = 195 (73.7 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 72/248 (29%), Positives = 106/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 649 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMKSAEPSVFTRTT 708
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + SPL +
Sbjct: 709 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSPLRNAV 768
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 769 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 828
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 829 MLVALIEF 836
Score = 192 (72.6 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 68/242 (28%), Positives = 114/242 (47%)
Query: 385 SYNEFVAKDKSPPGVKGYCIDVF-EAAVNL-LPYPVPHNYIMYGN-GKRNP---IYNDIV 438
+++ F DK +GYC+D+ E A ++ + Y + + G G R+P I+N +V
Sbjct: 433 NHDTFEGNDK----FEGYCVDLASEIAKHIGIKYKIA--IVPDGKYGARDPETKIWNGMV 486
Query: 439 QQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIP 497
++ K + AV +TI R +++DF++P+M G+ +++ QK K ++FL P
Sbjct: 487 GELVYGKAEIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYE 546
Query: 498 MWLVTGGFFLFVG-AVVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFS 541
+W+ F ++G +VV L RF+ E+ GP Q + WFS
Sbjct: 547 IWMCI--VFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLG 604
Query: 542 TMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISS 600
+ + SL GR SSYTA+L + LTV+++ S IE + L
Sbjct: 605 AFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQ 664
Query: 601 TE 602
TE
Sbjct: 665 TE 666
Score = 134 (52.2 bits), Expect = 3.3e-20, Sum P(2) = 3.3e-20
Identities = 68/294 (23%), Positives = 122/294 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYK--APFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + S++ A + ++
Sbjct: 141 ALLSLLDHYEWNRFVFLY-DTD---RGYSIL-QAIMEKAGQNSWQVSAICVENFNDASYR 195
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + + S+G Y +I + L S E
Sbjct: 196 RLLEDLDRRQEKKFVIDCEIERLQNLLEQIVSVGKHVKGYHYIVAN-LGFKDISLERFMH 254
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + TP + + RWK L +E +P + S AL YD V ++
Sbjct: 255 GGANVT-GFQLVDFSTP---MVTKLMQRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 308
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 309 AETFRNLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNV 361
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
+FD VN DV + TG R++GYW++ L ++ E ++ NR
Sbjct: 362 QFDHYGRRVNYTMDVFELKNTGPRKVGYWNDMDKLVLIQHEPTLGNDTSAMENR 415
Score = 37 (18.1 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 58 YQMHAVADLVEYYGWREVIAIFVDDDYG 85
Y + +++ ++ G + IAI D YG
Sbjct: 446 YCVDLASEIAKHIGIKYKIAIVPDGKYG 473
>UNIPROTKB|F1PE26 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 OMA:HAVPYVS EMBL:AAEX03010079
Ensembl:ENSCAFT00000013743 Uniprot:F1PE26
Length = 842
Score = 185 (70.2 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 377 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 434
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 435 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 492
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 493 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 552
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 553 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 599
Score = 184 (69.8 bits), Expect = 4.8e-20, Sum P(2) = 4.8e-20
Identities = 69/237 (29%), Positives = 101/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 533 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 592
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 593 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 652
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+LSE G
Sbjct: 653 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQG 712
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC S + S LSL + G+F I G+A +ALI F
Sbjct: 713 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 769
Score = 143 (55.4 bits), Expect = 3.8e-20, Sum P(2) = 3.8e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 69 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYR 127
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 128 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 179
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 180 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTTTIKYTSALTYDAV 238
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 239 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 290
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 291 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 336
>UNIPROTKB|I3LHM1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:CU915394 EMBL:FP325266 Ensembl:ENSSSCT00000022356
Uniprot:I3LHM1
Length = 854
Score = 185 (70.2 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 396 EGYCVDL--AAEIAKHCGFKYKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 453
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 454 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 511
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 512 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 571
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 572 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 618
Score = 174 (66.3 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 552 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 611
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 612 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 671
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 672 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQG 731
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 732 LLDKLKNKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 788
Score = 143 (55.4 bits), Expect = 3.9e-20, Sum P(2) = 3.9e-20
Identities = 67/286 (23%), Positives = 114/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 88 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDETYR 146
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 147 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 198
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y YD+V
Sbjct: 199 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTTTIKYTSALTYDAV 257
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 258 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 309
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 310 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 355
>FB|FBgn0031634 [details] [associations]
symbol:Ir25a "Ionotropic receptor 25a" species:7227
"Drosophila melanogaster" [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;ISS] [GO:0006811 "ion transport" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0050907 "detection of
chemical stimulus involved in sensory perception" evidence=IEP]
[GO:0015276 "ligand-gated ion channel activity" evidence=ISM]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0071683
"sensory dendrite" evidence=IDA] [GO:0005929 "cilium" evidence=IDA]
[GO:0007608 "sensory perception of smell" evidence=IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 GO:GO:0016021 GO:GO:0005886 EMBL:AE014134
GO:GO:0030054 GO:GO:0045211 GO:GO:0005929 GO:GO:0035235
GO:GO:0007608 GO:GO:0071683 KO:K05313 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 GO:GO:0050907 RefSeq:NP_608863.2
UniGene:Dm.23844 ProteinModelPortal:Q9VR32 SMR:Q9VR32 IntAct:Q9VR32
EnsemblMetazoa:FBtr0289979 GeneID:33683 KEGG:dme:Dmel_CG15627
UCSC:CG15627-RB CTD:33683 FlyBase:FBgn0031634 InParanoid:Q9VR32
OMA:FVMDHKY OrthoDB:EOG46WWQG PhylomeDB:Q9VR32 GenomeRNAi:33683
NextBio:784766 ArrayExpress:Q9VR32 Bgee:Q9VR32 Uniprot:Q9VR32
Length = 934
Score = 192 (72.6 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 60/244 (24%), Positives = 111/244 (45%)
Query: 389 FVAKDKSPP-GVKGYCIDVFE--AAVNLLPYPVPH-NYIMYGNGKRNPIYNDIVQQVALN 444
F+ +D++ P G KGYCID+ AA+ Y + +GN N +N IV+++
Sbjct: 438 FIMRDETAPKGYKGYCIDLINEIAAIVHFDYTIQEVEDGKFGNMDENGQWNGIVKKLMDK 497
Query: 445 KFDAAVGDITIVTNRTKLVDFTQPYMES-GLVVVAPVQKLKSSPWAFLKPFTIPMWLVTG 503
+ D +G ++++ R ++DFT PY + G+ ++ SS + FL +WL
Sbjct: 498 QADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSSLFKFLTVLETNVWLCIL 557
Query: 504 GFFLFVGAVVWILE----HRFNN---EFRGPPSQQ---LVTIFWFSFSTMFFSHRENTVS 553
+ F ++WI + + + N +++ ++ L WF +++
Sbjct: 558 AAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKREFNLKECLWFCMTSLTPQGGGEAPK 617
Query: 554 SL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTEPIGVQ-DGSF 611
+L GR +SYTA+L + LTV +L + +E +D L + + +GS
Sbjct: 618 NLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYAPLNGSS 677
Query: 612 AWNY 615
A Y
Sbjct: 678 AMTY 681
Score = 136 (52.9 bits), Expect = 4.7e-20, Sum P(2) = 4.7e-20
Identities = 41/156 (26%), Positives = 77/156 (49%)
Query: 613 WNYLVDE--LKIAES-RLVKLKNMEEYSIALARGPKGG-GVAAIVD--ELPYIELFMSKT 666
W+Y V + K+ ++ + KL + ++A R G A + D ++ Y++L T
Sbjct: 716 WDYPVSDKYTKMWQAMQEAKLPATLDEAVARVRNSTAATGFAFLGDATDIRYLQL----T 771
Query: 667 NCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDL 726
NC+ + VG+EF++ + A Q+ S L + AIL L L+K+ KW +E
Sbjct: 772 NCDLQVVGEEFSRKPYAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKNDEALAKC 831
Query: 727 SPADGGGSRLSLKSFWGLFLIC----GIACFLALIF 758
+ +S+++ G+F++ G+AC + L+F
Sbjct: 832 DKPEDQSDGISIQNIGGVFIVIFVGIGMAC-ITLVF 866
Score = 43 (20.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 215 ENSPSGFNSYALYAYDSVWLVAHALDALLNE--GGKF 249
E +P G+ Y + + + + H D + E GKF
Sbjct: 443 ETAPKGYKGYCIDLINEIAAIVH-FDYTIQEVEDGKF 478
>UNIPROTKB|F5GZ52 [details] [associations]
symbol:GRIN2A "Glutamate receptor ionotropic, NMDA 2A"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC006531 EMBL:AC007218 EMBL:AC022168
EMBL:AC026423 EMBL:AC133565 HGNC:HGNC:4585 InterPro:IPR018884
Pfam:PF10565 IPI:IPI01012161 ProteinModelPortal:F5GZ52 SMR:F5GZ52
Ensembl:ENST00000535259 UCSC:uc010uyn.2 ArrayExpress:F5GZ52
Bgee:F5GZ52 Uniprot:F5GZ52
Length = 1124
Score = 191 (72.3 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 59/237 (24%), Positives = 111/237 (46%)
Query: 372 NGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR 430
N +P R V S NE + K KG+CID+ + + + + G +GK+
Sbjct: 275 NTVPCRKFVKINNSTNEGMNVKKC---CKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 331
Query: 431 -NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWA 489
N ++N ++ +V + AVG +TI R+++VDF+ P++E+G+ V+ SP A
Sbjct: 332 VNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSA 391
Query: 490 FLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEF---RGP--PSQQLVTIFWFS 539
FL+PF+ +W++ L V A+ V++ E+ +N + P PS + W
Sbjct: 392 FLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLL 451
Query: 540 FSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ +F + +N + + +SYTA+L + + ++ Q+ G+
Sbjct: 452 WGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL 508
Score = 118 (46.6 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 48/201 (23%), Positives = 91/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + +
Sbjct: 486 ASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERN-IRNNYPYM 544
Query: 624 ESRLVKL--KNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE--FT 678
+ K K +E+ ++L K G + A + + + + C+ T+G F
Sbjct: 545 HQYMTKFNQKGVEDALVSL----KTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFA 600
Query: 679 KSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSL 738
+G+G A Q+ SP + A+LQ +G+++++ WLT C + + S+L +
Sbjct: 601 TTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT-GICHNEKNEVMS--SQLDI 657
Query: 739 KSFWGLFLICGIACFLALIFF 759
+ G+F + A L+LI F
Sbjct: 658 DNMAGVFYMLAAAMALSLITF 678
Score = 64 (27.6 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLD-STE 175
+ S V +++ + D + I S A+SLG+T + WI +PS++ +TE
Sbjct: 65 IHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWI----VPSLVSGNTE 109
Score = 44 (20.5 bits), Expect = 1.5e-17, Sum P(3) = 1.5e-17
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 75 VIAIFVDD-DYG-----RNGISVLGDALSKKRAKISY 105
+I++ DD DY R+GI +L A S K SY
Sbjct: 119 LISVSYDDWDYSLEARVRDGIGILTTAASSMLEKFSY 155
>UNIPROTKB|Q5R4M0 [details] [associations]
symbol:GRIA2 "Glutamate receptor 2" species:9601 "Pongo
abelii" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005789 GO:GO:0030054
GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 EMBL:CR861226
UniGene:Pab.364 ProteinModelPortal:Q5R4M0 SMR:Q5R4M0 PRIDE:Q5R4M0
InParanoid:Q5R4M0 Uniprot:Q5R4M0
Length = 883
Score = 185 (70.2 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 69/237 (29%), Positives = 101/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 599 WFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 658
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +++ E +AR K
Sbjct: 659 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMRSAEPSVFVRTTAEGVARVRKSK 718
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+LSE G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGTPVNLAVLKLSEQG 778
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC S + S LSL + G+F I G+A +ALI F
Sbjct: 779 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 835
Score = 183 (69.5 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 66/227 (29%), Positives = 107/227 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 443 EGYCVDL--AAEIAKHCGFKYKLTIAGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 500
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 501 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLYPLAYEIWMCI--VFAYIGVS 558
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQSSESTNEFGIFNSLWFSLGAFMRQGCDISPRSLS 618
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 665
Score = 133 (51.9 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 66/286 (23%), Positives = 113/286 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+EYY W + A D D G + + + D+ ++K+ +++ +
Sbjct: 135 ALLSLIEYYQW-DKFAYLYDSDRGLSTLQAVLDSAAEKKWQVTAINVGNINNDKKDEMYR 193
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL L + R ++ D I ++G Y +I + L T D
Sbjct: 194 SLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-----LGFT---DG 245
Query: 180 DTMNLLQG---VVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSV 232
D + + G V + D L FI RW L+ KE P + Y Y +V
Sbjct: 246 DLLKIQFGGANVSGFQIVDYDDSLVSKFIERWSTLEEKEY-PGAHTTTIKYTSALTYYAV 304
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGL 291
++ A L + + S D L++ V G G + + L ++ GL
Sbjct: 305 QVMTEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGQGVEIERALKQVQVEGL 356
Query: 292 SGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
SG I+FD + +N +++ + G R+IGYWS + V E+
Sbjct: 357 SGNIKFDQNGKRINYTINIMELKTNGPRKIGYWSEVDKMVVTLTEL 402
Score = 51 (23.0 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N PS S +
Sbjct: 832 LIEFCYKSRAEAKRMKVAKNAQNINPSSSQN 862
>UNIPROTKB|F1NAK2 [details] [associations]
symbol:GRIN2A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0001964 "startle response" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005262 "calcium channel activity" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008542 "visual learning"
evidence=IEA] [GO:0009611 "response to wounding" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0019233 "sensory
perception of pain" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IEA] [GO:0030431 "sleep" evidence=IEA] [GO:0033058
"directional locomotion" evidence=IEA] [GO:0042177 "negative
regulation of protein catabolic process" evidence=IEA] [GO:0042417
"dopamine metabolic process" evidence=IEA] [GO:0042428 "serotonin
metabolic process" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0048167
"regulation of synaptic plasticity" evidence=IEA] [GO:0051930
"regulation of sensory perception of pain" evidence=IEA]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0048167 GO:GO:0014069 GO:GO:0009986 GO:GO:0008104
GO:GO:0009611 GO:GO:0042493 GO:GO:0045471 GO:GO:0005262
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0042734 GO:GO:0001975 GO:GO:0030288 GO:GO:0042391
GO:GO:0043065 GO:GO:0042177 GO:GO:0042417 InterPro:IPR001828
GO:GO:0042428 GO:GO:0017146 GO:GO:0005234 GO:GO:0004972 OMA:CRSCLSN
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:AADN02023472 IPI:IPI00599444
ProteinModelPortal:F1NAK2 Ensembl:ENSGALT00000011793 Uniprot:F1NAK2
Length = 1437
Score = 199 (75.1 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 83/333 (24%), Positives = 147/333 (44%)
Query: 286 MNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGS-RRIGYWSNYSGLSV---VAPEILYTK 341
MN T ++ F AD +P V+ + ++G W N S LS+ V P Y+
Sbjct: 315 MNVTWEGKDLSFTADGYQAHPRLVVIVLNKDRVWEKVGKWENNS-LSLKYSVWPR--YSS 371
Query: 342 PPNSSSNRHLYSVIWPGEITATPRGWVFP------NNGMPLRIAVPNRVSYNEFVAKDKS 395
+S + + S++ E V P N +P R V S NE K
Sbjct: 372 FADSDPDDNHLSIVTLEEAPFVIVEDVDPLMESCQKNTVPCRKFVKINNSTNEGTNVKKC 431
Query: 396 PPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAVGDI 453
KG+CID+ + + + + G +GK+ N ++N ++ +V ++ AVG +
Sbjct: 432 ---CKGFCIDILKKLSKTVKFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYHRAVMAVGSL 488
Query: 454 TIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAV- 512
TI R+++VDF+ P++E+G+ V+ SP AFL+PF+ +W++ L V A+
Sbjct: 489 TINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAMA 548
Query: 513 VWILEH----RFNNEF---RGP--PSQQLVTIFWFSFSTMFFSHR--ENTVSSLGRXXXX 561
V+I E+ +N R P PS + W + +F + +N + +
Sbjct: 549 VFIFEYFSPVGYNRNLAQGRDPHGPSFTIGKAVWLLWGLVFNNSVPVQNPKGTTSKIMVS 608
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ Q+ G+
Sbjct: 609 VWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL 641
Score = 116 (45.9 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 46/203 (22%), Positives = 92/203 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLIS-----------STEPIGVQDGSFAWNYLVDE 619
+SYTA+L + + ++ Q+ G+ D T P G + + NY +
Sbjct: 619 ASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNY--PD 676
Query: 620 LKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE-- 676
+ + ++ + K +E+ ++L K G + A + + + + C+ T+G
Sbjct: 677 MHLYMTKYNQ-KGVEDALVSL----KTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYI 731
Query: 677 FTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRL 736
F +G+G A Q+ SP + A+LQ +G+++++ WLT C + + S+L
Sbjct: 732 FATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT-GICHNEKNEVMS--SQL 788
Query: 737 SLKSFWGLFLICGIACFLALIFF 759
+ + G+F + A L+LI F
Sbjct: 789 DIDNMAGVFYMLAAAMALSLITF 811
Score = 60 (26.2 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 17/74 (22%), Positives = 35/74 (47%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQG 187
+ S V +++ + D + I A+SLG+T + WI +PS++ +I G
Sbjct: 198 IHSSVILLYCSKDEAVYILDEARSLGLTGYDFFWI----VPSLVSGN--TEITPKEFPSG 251
Query: 188 VVALRHHTPDTDLK 201
+++ + D L+
Sbjct: 252 LISASYDEWDYSLE 265
>ZFIN|ZDB-GENE-020125-3 [details] [associations]
symbol:gria2a "glutamate receptor, ionotropic, AMPA
2a" species:7955 "Danio rerio" [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-3 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 HOVERGEN:HBG051839 KO:K05198 EMBL:AF525743
IPI:IPI00486705 RefSeq:NP_571969.1 UniGene:Dr.107958
ProteinModelPortal:Q71E63 SMR:Q71E63 PRIDE:Q71E63 GeneID:170450
KEGG:dre:170450 CTD:170450 InParanoid:Q71E63 NextBio:20797091
ArrayExpress:Q71E63 Bgee:Q71E63 Uniprot:Q71E63
Length = 875
Score = 192 (72.6 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 65/224 (29%), Positives = 102/224 (45%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVALNKFDAAVGDITI 455
+GYC+D+ + + G G R+ I+N +V ++ K D AV +TI
Sbjct: 436 EGYCVDLAAEIAKHCGFKYQLRIVADGKYGARDAETKIWNGMVGELVYGKADIAVAPLTI 495
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-AVV 513
R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +VV
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVSVV 553
Query: 514 WILEHRFN------NEFR----GPP-SQQLVTIF---WFSFSTMFFSHRENTVSSL-GRX 558
L RF+ EF GP S IF WFS + + SL GR
Sbjct: 554 LFLVSRFSPYEWHTEEFEDGQLGPSESTNEFGIFNSLWFSLGAFMRQGCDISPRSLSGRI 613
Query: 559 XXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
SSYTA+L + LTV+++ S IE + L TE
Sbjct: 614 VGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 657
Score = 171 (65.3 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 71/241 (29%), Positives = 101/241 (41%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 591 WFSLGAFMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 650
Query: 596 SLISSTE-PIGVQDGSFAWNY-------LVDEL----KIAESRLVKLKNMEEYSIALARG 643
L TE G D + L D++ K AE V +KN E + R
Sbjct: 651 DLAKQTEIAYGTLDAGSTKEFFRRSKIALFDKMWQYMKSAEPS-VFVKNTVE---GVLRV 706
Query: 644 PKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQL 703
K G A + E E + C+ VG G+G A + S L ++ A+L+L
Sbjct: 707 RKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNAVNLAVLKL 766
Query: 704 SENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIF 758
+E G L K+ NKW EC + S LSL + G+F I G+A +AL+
Sbjct: 767 NEQGLLDKLKNKWWYDKGECGSGGGESKEKTSALSLSNVAGVFYILVGGLGLAMLVALVE 826
Query: 759 F 759
F
Sbjct: 827 F 827
Score = 129 (50.5 bits), Expect = 2.1e-19, Sum P(2) = 2.1e-19
Identities = 68/299 (22%), Positives = 120/299 (40%)
Query: 66 LVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKIS------YKAPFSPGASRSAIN 119
LVEYY W E A D D G + + + D ++++ +++ K + A RS
Sbjct: 134 LVEYYKW-EKFAYLYDSDRGLSTLQAVLDTAAERKWQVTAINVGNLKDEWKDEAYRSLFQ 192
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDST-EPVD 178
L N E RV ++ D I ++G Y +I ++ +D +
Sbjct: 193 DL---ENKNERRV-ILDCEQDKVKDIMEQVITIGRHVKGYHYIIANF--GFVDGDLSKIQ 246
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE--NSPSGFNSYALYAYDSVWLVA 236
N+ G + P L F RW+ L+ KE + S + YD+V ++
Sbjct: 247 YGGANV-SGFQIVDFDDP---LVAKFDQRWEALEEKEYPGADSRIRYTSALTYDAVQVMT 302
Query: 237 HALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIR 296
A L + + S NG L ++ + G + + L ++ GL+G I+
Sbjct: 303 EAFRFLHKQ--RIDISR----RGNNGDCLANPAVP-WAQGVEIERALKQVRVDGLTGNIQ 355
Query: 297 FDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVI 355
FD VN +V+ + +G +IGYW+ ++V ++ PN + +VI
Sbjct: 356 FDQYGRRVNYTVNVMELKNSGPVKIGYWNEMDKMAVTKSDLF----PNDTMGMENKTVI 410
Score = 40 (19.1 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 9/36 (25%), Positives = 20/36 (55%)
Query: 53 TQSDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
T ++ Y+ + V A++ ++ G++ + I D YG
Sbjct: 430 TDNERYEGYCVDLAAEIAKHCGFKYQLRIVADGKYG 465
>UNIPROTKB|F1PXS6 [details] [associations]
symbol:GRIN2A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051930
"regulation of sensory perception of pain" evidence=IEA]
[GO:0048167 "regulation of synaptic plasticity" evidence=IEA]
[GO:0045471 "response to ethanol" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042428 "serotonin metabolic process"
evidence=IEA] [GO:0042417 "dopamine metabolic process"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] [GO:0033058 "directional locomotion"
evidence=IEA] [GO:0030431 "sleep" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IEA] [GO:0019233 "sensory perception of
pain" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IEA] [GO:0014069 "postsynaptic
density" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0008542
"visual learning" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0007613 "memory" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0001975 "response to amphetamine" evidence=IEA]
[GO:0001964 "startle response" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0048167
GO:GO:0014069 GO:GO:0009986 GO:GO:0008104 GO:GO:0009611
GO:GO:0022008 GO:GO:0042493 GO:GO:0045471 GO:GO:0007613
GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0008542
GO:GO:0060079 GO:GO:0042734 GO:GO:0001975 GO:GO:0030288
GO:GO:0043065 GO:GO:0042177 GO:GO:0042417 InterPro:IPR001828
GO:GO:0042428 GO:GO:0001964 GO:GO:0017146 GO:GO:0005234
GO:GO:0004972 OMA:CRSCLSN GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 EMBL:AAEX03004548
Ensembl:ENSCAFT00000030136 Uniprot:F1PXS6
Length = 1307
Score = 191 (72.3 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 59/237 (24%), Positives = 111/237 (46%)
Query: 372 NGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR 430
N +P R V S NE + K KG+CID+ + + + + G +GK+
Sbjct: 275 NTVPCRKFVKINNSTNEGMNVKKC---CKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 331
Query: 431 -NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWA 489
N ++N ++ +V + AVG +TI R+++VDF+ P++E+G+ V+ SP A
Sbjct: 332 VNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSA 391
Query: 490 FLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEF---RGP--PSQQLVTIFWFS 539
FL+PF+ +W++ L V A+ V++ E+ +N + P PS + W
Sbjct: 392 FLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLL 451
Query: 540 FSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ +F + +N + + +SYTA+L + + ++ Q+ G+
Sbjct: 452 WGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL 508
Score = 118 (46.6 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 48/201 (23%), Positives = 91/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + +
Sbjct: 486 ASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERN-IRNNYPYM 544
Query: 624 ESRLVKL--KNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE--FT 678
+ K K +E+ ++L K G + A + + + + C+ T+G F
Sbjct: 545 HQYMTKFNQKGVEDALVSL----KTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFA 600
Query: 679 KSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSL 738
+G+G A Q+ SP + A+LQ +G+++++ WLT C + + S+L +
Sbjct: 601 TTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT-GICHNEKNEVMS--SQLDI 657
Query: 739 KSFWGLFLICGIACFLALIFF 759
+ G+F + A L+LI F
Sbjct: 658 DNMAGVFYMLAAAMALSLITF 678
Score = 64 (27.6 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLD-STE 175
+ S V +++ + D + I S A+SLG+T + WI +PS++ +TE
Sbjct: 65 IHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWI----VPSLVSGNTE 109
>UNIPROTKB|F1NKF1 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0032281 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
OMA:HAVPYVS EMBL:AADN02016515 EMBL:AADN02016516 EMBL:AADN02016517
EMBL:AADN02016518 EMBL:AADN02016519 IPI:IPI00603883
ProteinModelPortal:F1NKF1 Ensembl:ENSGALT00000038841
ArrayExpress:F1NKF1 Uniprot:F1NKF1
Length = 883
Score = 187 (70.9 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 70/237 (29%), Positives = 101/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 599 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 658
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +K+ E +AR K
Sbjct: 659 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSK 718
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+LSE G
Sbjct: 719 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQG 778
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC S + S LSL + G+F I G+A +ALI F
Sbjct: 779 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 835
Score = 182 (69.1 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 64/227 (28%), Positives = 106/227 (46%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ + + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 443 EGYCVDLATEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 500
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 501 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 558
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 559 VVLFLVSRFSPYEWHTEEFEDGRETQTNESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 618
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 619 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 665
Score = 131 (51.2 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 64/281 (22%), Positives = 114/281 (40%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRS--AIN 119
A+ L+EY W++ I ++ G + + + D+ ++K+ +++ + R
Sbjct: 135 ALLSLIEYSSWQKYAKI-LNTSLGLSTLQAVLDSAAEKKWQVTAINVGNINNDRKDETYR 193
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
SL + + R ++ D I ++G Y +I + L +
Sbjct: 194 SLFQDLEVKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIAN-LGFTDGDLSKIQF 252
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSVWLV 235
N+ G + + P L FI RW L+ KE P S Y YD+V ++
Sbjct: 253 GGANV-SGFQIVDYDDP---LVSKFIQRWSTLEEKEY-PGAHTSTIKYTSALTYDAVQVM 307
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGLSGE 294
A L + + S D L++ V G G + + L ++ GL+G
Sbjct: 308 TEAFRNLRKQ--RIEISRRGNAGDC------LANPAVPWGHGVEIERALKQVQVEGLTGN 359
Query: 295 IRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAP 335
I+FD + +N +V+ + TG R+IGYWS + VV P
Sbjct: 360 IKFDQNGKRINFTINVMELKSTGPRKIGYWSEVDKM-VVNP 399
Score = 48 (22.0 bits), Expect = 2.9e-19, Sum P(3) = 2.9e-19
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N P+ S +
Sbjct: 832 LIEFCYKSRAEAKRMKVAKNAQNINPTSSQN 862
>UNIPROTKB|Q12879 [details] [associations]
symbol:GRIN2A "Glutamate receptor ionotropic, NMDA 2A"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0001964
"startle response" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate
selective glutamate receptor activity" evidence=IEA] [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0007613 "memory"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0008542 "visual learning" evidence=IEA] [GO:0009611 "response
to wounding" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0030431
"sleep" evidence=IEA] [GO:0033058 "directional locomotion"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] [GO:0042417 "dopamine metabolic process"
evidence=IEA] [GO:0042428 "serotonin metabolic process"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0048167 "regulation of synaptic plasticity" evidence=IEA]
[GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=IDA] [GO:0045471 "response to
ethanol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0006810
"transport" evidence=TAS] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0007611 "learning or memory" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0009986 "cell surface"
evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0021987 GO:GO:0021766
GO:GO:0014069 GO:GO:0009986 GO:GO:0008104 GO:GO:0009611
GO:GO:0071363 GO:GO:0022008 GO:GO:0051592 GO:GO:0042493
GO:GO:0045471 GO:GO:0060992 GO:GO:0046872 GO:GO:0042220
GO:GO:0007268 GO:GO:0007613 GO:GO:0019233 GO:GO:0030431
GO:GO:0005262 GO:GO:0051930 GO:GO:0030054 GO:GO:0045211
GO:GO:0008270 GO:GO:0008542 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0001975 DrugBank:DB00142 GO:GO:0048511
GO:GO:0030288 GO:GO:0051707 GO:GO:0007611 GO:GO:0043065
GO:GO:0001508 GO:GO:0009743 GO:GO:0071294 GO:GO:0042177
DrugBank:DB00145 GO:GO:0021510 GO:GO:0048169 GO:GO:0042417
InterPro:IPR001828 GO:GO:0042428 GO:GO:0051597 GO:GO:0071230
GO:GO:0071396 DrugBank:DB00836 GO:GO:0001964 DrugBank:DB01043
DrugBank:DB00949 GO:GO:0016595 GO:GO:0071287 GO:GO:0017146
GO:GO:0071286 GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0071359 GO:GO:0022843 GO:GO:0004972 EMBL:U09002 EMBL:U90277
EMBL:AC006531 EMBL:AC007218 EMBL:AC022168 EMBL:AC026423
EMBL:AC133565 EMBL:BC117131 EMBL:BC143273 IPI:IPI00029768
PIR:S47555 RefSeq:NP_000824.1 RefSeq:NP_001127879.1
RefSeq:NP_001127880.1 UniGene:Hs.411472 PDB:3NFL PDBsum:3NFL
ProteinModelPortal:Q12879 SMR:Q12879 MINT:MINT-414776 STRING:Q12879
PhosphoSite:Q12879 DMDM:14285603 PaxDb:Q12879 PRIDE:Q12879
DNASU:2903 Ensembl:ENST00000330684 Ensembl:ENST00000396573
Ensembl:ENST00000396575 Ensembl:ENST00000404927
Ensembl:ENST00000562109 GeneID:2903 KEGG:hsa:2903 UCSC:uc002czo.4
CTD:2903 GeneCards:GC16M009762 HGNC:HGNC:4585 HPA:CAB022725
MIM:138253 MIM:613971 neXtProt:NX_Q12879 Orphanet:289266
PharmGKB:PA28979 HOVERGEN:HBG052635 InParanoid:Q12879 KO:K05209
OMA:CRSCLSN OrthoDB:EOG4X0MRG PhylomeDB:Q12879 BindingDB:Q12879
ChEMBL:CHEMBL1972 EvolutionaryTrace:Q12879 GenomeRNAi:2903
NextBio:11495 ArrayExpress:Q12879 Bgee:Q12879 CleanEx:HS_GRIN2A
Genevestigator:Q12879 GermOnline:ENSG00000183454 GO:GO:0033058
InterPro:IPR018884 Pfam:PF10565 Uniprot:Q12879
Length = 1464
Score = 191 (72.3 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 59/237 (24%), Positives = 111/237 (46%)
Query: 372 NGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR 430
N +P R V S NE + K KG+CID+ + + + + G +GK+
Sbjct: 432 NTVPCRKFVKINNSTNEGMNVKKC---CKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
Query: 431 -NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWA 489
N ++N ++ +V + AVG +TI R+++VDF+ P++E+G+ V+ SP A
Sbjct: 489 VNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSA 548
Query: 490 FLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEF---RGP--PSQQLVTIFWFS 539
FL+PF+ +W++ L V A+ V++ E+ +N + P PS + W
Sbjct: 549 FLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLL 608
Query: 540 FSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ +F + +N + + +SYTA+L + + ++ Q+ G+
Sbjct: 609 WGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL 665
Score = 118 (46.6 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 48/201 (23%), Positives = 91/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + +
Sbjct: 643 ASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERN-IRNNYPYM 701
Query: 624 ESRLVKL--KNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE--FT 678
+ K K +E+ ++L K G + A + + + + C+ T+G F
Sbjct: 702 HQYMTKFNQKGVEDALVSL----KTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFA 757
Query: 679 KSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSL 738
+G+G A Q+ SP + A+LQ +G+++++ WLT C + + S+L +
Sbjct: 758 TTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT-GICHNEKNEVMS--SQLDI 814
Query: 739 KSFWGLFLICGIACFLALIFF 759
+ G+F + A L+LI F
Sbjct: 815 DNMAGVFYMLAAAMALSLITF 835
Score = 64 (27.6 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLD-STE 175
+ S V +++ + D + I S A+SLG+T + WI +PS++ +TE
Sbjct: 222 IHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWI----VPSLVSGNTE 266
Score = 44 (20.5 bits), Expect = 4.0e-17, Sum P(3) = 4.0e-17
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 75 VIAIFVDD-DYG-----RNGISVLGDALSKKRAKISY 105
+I++ DD DY R+GI +L A S K SY
Sbjct: 276 LISVSYDDWDYSLEARVRDGIGILTTAASSMLEKFSY 312
>UNIPROTKB|Q5IS45 [details] [associations]
symbol:GRIN2A "Glutamate receptor ionotropic, NMDA 2A"
species:9598 "Pan troglodytes" [GO:0008270 "zinc ion binding"
evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0048167 GO:GO:0014069 GO:GO:0009986 GO:GO:0008104
GO:GO:0009611 GO:GO:0022008 GO:GO:0042493 GO:GO:0045471
GO:GO:0046872 GO:GO:0007613 GO:GO:0019233 GO:GO:0030431
GO:GO:0005262 GO:GO:0051930 GO:GO:0030054 GO:GO:0045211
GO:GO:0008270 GO:GO:0035235 GO:GO:0008542 GO:GO:0060079
GO:GO:0042734 GO:GO:0001975 GO:GO:0030288 GO:GO:0043065
GO:GO:0042177 GO:GO:0042417 InterPro:IPR001828 GO:GO:0042428
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0004972 CTD:2903 HOVERGEN:HBG052635 KO:K05209
OrthoDB:EOG4X0MRG GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
HOGENOM:HOG000113802 EMBL:AY665283 RefSeq:NP_001029361.1
UniGene:Ptr.6230 ProteinModelPortal:Q5IS45 SMR:Q5IS45 STRING:Q5IS45
PRIDE:Q5IS45 GeneID:454396 KEGG:ptr:454396 InParanoid:Q5IS45
NextBio:20836053 Uniprot:Q5IS45
Length = 1464
Score = 191 (72.3 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 59/237 (24%), Positives = 111/237 (46%)
Query: 372 NGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR 430
N +P R V S NE + K KG+CID+ + + + + G +GK+
Sbjct: 432 NTVPCRKFVKINNSTNEGMNVKKC---CKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
Query: 431 -NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWA 489
N ++N ++ +V + AVG +TI R+++VDF+ P++E+G+ V+ SP A
Sbjct: 489 VNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSA 548
Query: 490 FLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEF---RGP--PSQQLVTIFWFS 539
FL+PF+ +W++ L V A+ V++ E+ +N + P PS + W
Sbjct: 549 FLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLL 608
Query: 540 FSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ +F + +N + + +SYTA+L + + ++ Q+ G+
Sbjct: 609 WGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL 665
Score = 118 (46.6 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 48/201 (23%), Positives = 91/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + +
Sbjct: 643 ASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERN-IRNNYPYM 701
Query: 624 ESRLVKL--KNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE--FT 678
+ K K +E+ ++L K G + A + + + + C+ T+G F
Sbjct: 702 HQYMTKFNQKGVEDALVSL----KTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFA 757
Query: 679 KSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSL 738
+G+G A Q+ SP + A+LQ +G+++++ WLT C + + S+L +
Sbjct: 758 TTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT-GICHNEKNEVMS--SQLDI 814
Query: 739 KSFWGLFLICGIACFLALIFF 759
+ G+F + A L+LI F
Sbjct: 815 DNMAGVFYMLAAAMALSLITF 835
Score = 64 (27.6 bits), Expect = 3.6e-19, Sum P(3) = 3.6e-19
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLD-STE 175
+ S V +++ + D + I S A+SLG+T + WI +PS++ +TE
Sbjct: 222 IHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWI----VPSLVSGNTE 266
Score = 44 (20.5 bits), Expect = 4.0e-17, Sum P(3) = 4.0e-17
Identities = 14/37 (37%), Positives = 19/37 (51%)
Query: 75 VIAIFVDD-DYG-----RNGISVLGDALSKKRAKISY 105
+I++ DD DY R+GI +L A S K SY
Sbjct: 276 LISVSYDDWDYSLEARVRDGIGILTTAASSMLEKFSY 312
>UNIPROTKB|E2RFB5 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AAEX03000923 Ensembl:ENSCAFT00000007929
Uniprot:E2RFB5
Length = 980
Score = 155 (59.6 bits), Expect = 5.1e-19, Sum P(3) = 5.1e-19
Identities = 52/199 (26%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ +E D L T G + + R+
Sbjct: 633 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 692
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELP--YIELFMS----KTNCEFRTVGQEFTKSGWGF 684
++ S+ + +G +A +++ +E M+ + NC +G G+G
Sbjct: 693 MQSKQPSVFVKSTEEG--IARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGI 750
Query: 685 AFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGL 744
SP +++ AILQL EN L+ + KW C + D L +++ G+
Sbjct: 751 GMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE---EDHRAKGLGMENIGGI 807
Query: 745 F--LICG--IACFLALIFF 759
F LICG IA F+A++ F
Sbjct: 808 FVVLICGLIIAVFVAVMEF 826
Score = 129 (50.5 bits), Expect = 5.1e-19, Sum P(3) = 5.1e-19
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQ-VALNKFDAAVGDITI 455
+G+C+D+ LL + + +YG + N + +V + + K D AV TI
Sbjct: 443 EGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQKADLAVAAFTI 502
Query: 456 VTNRTKLVDFTQPYMESGLVVVAPVQK-LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ V K ++FL PF+ +WL +L V V++
Sbjct: 503 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLF 562
Query: 515 ILEHRFNNEFRGP 527
+ E+ P
Sbjct: 563 LAARLSPYEWYNP 575
Score = 83 (34.3 bits), Expect = 5.1e-19, Sum P(3) = 5.1e-19
Identities = 49/198 (24%), Positives = 76/198 (38%)
Query: 134 VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGVVALRH 193
++ N I A LGMT+ Y +I T +L V+ DT N+L
Sbjct: 215 IIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGIVE-DTSNIL----GFSM 269
Query: 194 HTPDTDLKKNFISRWKNLKYK----ENSPSGFNSYALYAYDSVWLVAHALDALLNEGGKF 249
+ D +F S K YK + P S AL +D+V +V A+ L
Sbjct: 270 FSTDVHSGPHF-SPAKTHSYKHMCTDTCPQPQLSAALM-FDAVHVVVSAVREL------- 320
Query: 250 TFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYD 309
N + + L +S ++ G + L + + GL+G + F++ N
Sbjct: 321 ---N--RSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLR 375
Query: 310 VLNIGGTGSRRIGYW-SN 326
+L G R IG W SN
Sbjct: 376 ILEKSRQGHREIGVWYSN 393
Score = 73 (30.8 bits), Expect = 1.8e-17, Sum P(4) = 1.8e-17
Identities = 68/299 (22%), Positives = 116/299 (38%)
Query: 5 VVAAIGPQSS-GIAHVISHVVNELNVPLLSFGATD-PTLTSLQYPYFLRTTQSDYYQMHA 62
VV+ +GP SS A +SH+ E +P + G + P L L++ ++ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 63 VADLVEYYGWREVIAIFVDDD-YGRNGISVLGDALSKKRAKISYKAPF-SPGASRSAINS 120
V+ +++ + + I + R V G +SK+ + P I
Sbjct: 149 VSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPTPLLKEIRD 208
Query: 121 LLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDID 180
V ++++ + H+ I A LGMT+ Y +I T +L V+ D
Sbjct: 209 DKVSTIIIDANASISHL-------ILRKASELGMTSAFYKYILTTMDFPILHLDGIVE-D 260
Query: 181 TMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYK----ENSPSGFNSYALYAYDSVWLVA 236
T N+L + D +F S K YK + P S AL +D+V +V
Sbjct: 261 TSNIL----GFSMFSTDVHSGPHF-SPAKTHSYKHMCTDTCPQPQLSAALM-FDAVHVVV 314
Query: 237 HALDALLNE---GGKFTFSNDPKLHDTNGSMLNLSSLRVFDG--GQ-QFLQTLLRMNFT 289
A+ L G K + S++N + +DG G+ +F R N+T
Sbjct: 315 SAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYT 373
Score = 38 (18.4 bits), Expect = 1.8e-17, Sum P(4) = 1.8e-17
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 285 RMNFTGLSGEIRFD 298
R NF LSG RF+
Sbjct: 430 RPNFQALSGNERFE 443
>ZFIN|ZDB-GENE-100920-7 [details] [associations]
symbol:grin2db "glutamate receptor, ionotropic,
N-methyl D-aspartate 2D, b" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-100920-7
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00540000070221 EMBL:BX005260
EMBL:CR854957 EMBL:CU462911 IPI:IPI00771763
Ensembl:ENSDART00000103882 Uniprot:E7F3Z4
Length = 1959
Score = 203 (76.5 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 82/333 (24%), Positives = 149/333 (44%)
Query: 287 NFTGLSG-EIRFDADKNLVNPAYDVLNIG-GTGSRRIGYWSN------YSGLSVVAPEIL 338
N T L G + F + L NP DV++ G+G +G+W N Y S P
Sbjct: 369 NIT-LGGRDYSFSNEGYLANPFLDVISYTPGSGWEDVGWWENGVLRLRYPAWSRYGP--- 424
Query: 339 YTKPPNSSSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAVPNRVSYNEFVAKDKSPPG 398
+ +PP+ + +HL V+ E +G +R +VP R N ++ P
Sbjct: 425 FLQPPDDA--QHL-RVVTLEERPFVIVELADAASGTCIRDSVPCRRPLNASALQEGVAPV 481
Query: 399 ---VKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAVGDI 453
KG+CID+ + ++ + + G +GK+ + ++N +V +V + D A+G +
Sbjct: 482 KQCCKGFCIDILKRLARIVGFTYDLYLVTNGKHGKKIDGVWNGMVGEVVYKRADMAIGSL 541
Query: 454 TIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAV- 512
TI R+++VDF+ P++E+G+ V+ SP AFL+P++ +W++ L V AV
Sbjct: 542 TINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVT 601
Query: 513 VWILEH----RFNNEFRGPPSQ--QLVTI---FWFSFSTMFFSHR--ENTVSSLGRXXXX 561
V+I E +N + TI W ++ +F + EN + +
Sbjct: 602 VFIFEFFSPVGYNRSLQSGKKAGGSKFTIGKSIWLLWALVFNNSVPVENPKGTTSKIMVL 661
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ + G+
Sbjct: 662 VWAFFAVIFLASYTANLAAFMIQEEYIDTVSGL 694
Score = 100 (40.3 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 48/199 (24%), Positives = 90/199 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS-TE---PI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ + G+ D TE P+ G V +GS N +
Sbjct: 672 ASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLKFGTVPNGSTEKN-IRSNYPDM 730
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
+VK N + A++ K G + A + + + K C+ T+G + F +
Sbjct: 731 HQYMVKY-NQKSVEDAISH-LKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATT 788
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A ++S L A+LQL + +++ + WL+ C D + S+L + +
Sbjct: 789 GYGIALIKNSRWKRPLDLALLQLVGDDEIEMLERLWLS-GICHND--KIEVMSSKLDIDN 845
Query: 741 FWGLFLICGIACFLALIFF 759
G+F + +A L+L+ F
Sbjct: 846 MAGVFYMLLVAMGLSLLVF 864
Score = 71 (30.1 bits), Expect = 6.8e-19, Sum P(3) = 6.8e-19
Identities = 31/162 (19%), Positives = 72/162 (44%)
Query: 11 PQSSG-IAHVISHVVNELNVPLLSFG--ATDPTLTSLQYPYFLRTTQSDYYQMHAVADLV 67
P ++G +A ++ V + +P+++ G A + FL+ + S Q+ + +++
Sbjct: 131 PLATGPLAPMLEFVSAQTGLPIVAVGGGAALGRVPQESGSIFLQFSSSTALQLEVIFEVL 190
Query: 68 EYYGWREVIAIFVDDDYGRNGISVL-----GDALS-KKRAKISYKAPFSPGASRSAINSL 121
E Y W + ++ +SV+ G + +K++ + PG R+
Sbjct: 191 EEYDWTAFSVVSTRHHGYQDFLSVVEGLTDGSFIGWEKKSIVMLNLTDDPGGVRT---QR 247
Query: 122 LVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIA 163
L+ N E++V +++ + + +F A + G S++W A
Sbjct: 248 LLKEN--EAQVRLLYCSQEEAEQVFLAAWAAGQAGASHIWFA 287
>MGI|MGI:95820 [details] [associations]
symbol:Grin2a "glutamate receptor, ionotropic, NMDA2A (epsilon
1)" species:10090 "Mus musculus" [GO:0001508 "regulation of action
potential" evidence=ISO] [GO:0001964 "startle response"
evidence=IGI;IMP] [GO:0001975 "response to amphetamine"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005261 "cation channel activity"
evidence=ISO;IMP] [GO:0005262 "calcium channel activity"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IGI;IMP] [GO:0007268 "synaptic
transmission" evidence=ISO;IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0007612 "learning" evidence=IMP] [GO:0007613
"memory" evidence=ISO;IMP] [GO:0007626 "locomotory behavior"
evidence=TAS] [GO:0008021 "synaptic vesicle" evidence=IDA]
[GO:0008104 "protein localization" evidence=IGI;IMP] [GO:0008270
"zinc ion binding" evidence=ISO] [GO:0008542 "visual learning"
evidence=IMP] [GO:0009611 "response to wounding" evidence=IGI;IMP]
[GO:0009986 "cell surface" evidence=IDA] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=ISO] [GO:0017146 "N-methyl-D-aspartate
selective glutamate receptor complex" evidence=ISO;IPI] [GO:0019233
"sensory perception of pain" evidence=IMP] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0022008 "neurogenesis"
evidence=IMP] [GO:0022843 "voltage-gated cation channel activity"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0030431 "sleep" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033058 "directional locomotion"
evidence=IGI] [GO:0034220 "ion transmembrane transport"
evidence=IMP] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IGI;IMP] [GO:0035254 "glutamate receptor
binding" evidence=ISO] [GO:0040011 "locomotion" evidence=IMP]
[GO:0042165 "neurotransmitter binding" evidence=ISO] [GO:0042177
"negative regulation of protein catabolic process" evidence=IGI]
[GO:0042391 "regulation of membrane potential" evidence=IMP]
[GO:0042417 "dopamine metabolic process" evidence=IMP] [GO:0042428
"serotonin metabolic process" evidence=IMP] [GO:0042493 "response
to drug" evidence=IMP] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IGI] [GO:0043195 "terminal bouton" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=ISA] [GO:0045202 "synapse"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=ISO;IMP] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=ISO] [GO:0048167 "regulation of
synaptic plasticity" evidence=IMP] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=ISO] [GO:0048511
"rhythmic process" evidence=ISO] [GO:0050804 "regulation of
synaptic transmission" evidence=IMP] [GO:0050839 "cell adhesion
molecule binding" evidence=ISO] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0051117 "ATPase binding" evidence=ISO]
[GO:0051262 "protein tetramerization" evidence=ISO] [GO:0051930
"regulation of sensory perception of pain" evidence=IMP]
[GO:0060078 "regulation of postsynaptic membrane potential"
evidence=IMP] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=ISO;IGI;IMP] [GO:0070588 "calcium ion
transmembrane transport" evidence=IMP] [GO:0071230 "cellular
response to amino acid stimulus" evidence=ISO] [GO:0071294
"cellular response to zinc ion" evidence=ISO] [GO:0097110 "scaffold
protein binding" evidence=ISO] [GO:2000463 "positive regulation of
excitatory postsynaptic membrane potential" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95820
GO:GO:0021987 GO:GO:0021766 GO:GO:0048167 GO:GO:0014069
GO:GO:0009986 GO:GO:0008104 GO:GO:0009611 GO:GO:0071363
GO:GO:0022008 GO:GO:0051592 GO:GO:0042493 GO:GO:0045471
GO:GO:0060992 GO:GO:0046872 GO:GO:0042220 GO:GO:0007613
GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008021 GO:GO:0008270
GO:GO:0008542 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0007626 GO:GO:0001975 GO:GO:0048511 GO:GO:0030288
GO:GO:0051707 GO:GO:0043065 GO:GO:0001508 GO:GO:0009743
GO:GO:0071294 GO:GO:0042177 GO:GO:0021510 GO:GO:0048169
GO:GO:0042417 InterPro:IPR001828 GO:GO:0042428 GO:GO:0051597
GO:GO:0071230 GO:GO:0071396 GO:GO:0001964 GO:GO:0016595
GO:GO:0071287 GO:GO:0017146 GO:GO:0071286 GO:GO:0042165
GO:GO:0005234 eggNOG:NOG282132 GO:GO:0071359 GO:GO:0022843
GO:GO:0004972 CTD:2903 HOVERGEN:HBG052635 KO:K05209 OMA:CRSCLSN
OrthoDB:EOG4X0MRG GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
EMBL:D10217 IPI:IPI00118380 PIR:S29159 RefSeq:NP_032196.2
UniGene:Mm.2953 ProteinModelPortal:P35436 SMR:P35436 DIP:DIP-31567N
IntAct:P35436 MINT:MINT-103939 STRING:P35436 PhosphoSite:P35436
PaxDb:P35436 PRIDE:P35436 DNASU:14811 Ensembl:ENSMUST00000032331
Ensembl:ENSMUST00000115835 GeneID:14811 KEGG:mmu:14811
UCSC:uc007ydc.1 GeneTree:ENSGT00540000070221 HOGENOM:HOG000113802
InParanoid:P35436 BindingDB:P35436 ChEMBL:CHEMBL2521 NextBio:286999
Bgee:P35436 Genevestigator:P35436 GermOnline:ENSMUSG00000059003
Uniprot:P35436
Length = 1464
Score = 191 (72.3 bits), Expect = 7.2e-19, Sum P(3) = 7.2e-19
Identities = 59/237 (24%), Positives = 111/237 (46%)
Query: 372 NGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR 430
N +P R V S NE + K KG+CID+ + + + + G +GK+
Sbjct: 432 NTVPCRKFVKINNSTNEGMNVKKC---CKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
Query: 431 -NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWA 489
N ++N ++ +V + AVG +TI R+++VDF+ P++E+G+ V+ SP A
Sbjct: 489 VNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSA 548
Query: 490 FLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEF---RGP--PSQQLVTIFWFS 539
FL+PF+ +W++ L V A+ V++ E+ +N + P PS + W
Sbjct: 549 FLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLL 608
Query: 540 FSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ +F + +N + + +SYTA+L + + ++ Q+ G+
Sbjct: 609 WGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL 665
Score = 115 (45.5 bits), Expect = 7.2e-19, Sum P(3) = 7.2e-19
Identities = 47/201 (23%), Positives = 91/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + +
Sbjct: 643 ASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERN-IRNNYPYM 701
Query: 624 ESRLVKL--KNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE--FT 678
+ K + +E+ ++L K G + A + + + + C+ T+G F
Sbjct: 702 HQYMTKFNQRGVEDALVSL----KTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFA 757
Query: 679 KSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSL 738
+G+G A Q+ SP + A+LQ +G+++++ WLT C + + S+L +
Sbjct: 758 TTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT-GICHNEKNEVMS--SQLDI 814
Query: 739 KSFWGLFLICGIACFLALIFF 759
+ G+F + A L+LI F
Sbjct: 815 DNMAGVFYMLAAAMALSLITF 835
Score = 64 (27.6 bits), Expect = 7.2e-19, Sum P(3) = 7.2e-19
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLD-STE 175
+ S V +++ + D + I S A+SLG+T + WI +PS++ +TE
Sbjct: 222 IHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWI----VPSLVSGNTE 266
Score = 42 (19.8 bits), Expect = 1.3e-16, Sum P(3) = 1.3e-16
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 75 VIAIFVDD-DYG-----RNGISVLGDALSKKRAKISY 105
+I++ DD DY R+G+ +L A S K SY
Sbjct: 276 LISVSYDDWDYSLEARVRDGLGILTTAASSMLEKFSY 312
>MGI|MGI:95811 [details] [associations]
symbol:Gria4 "glutamate receptor, ionotropic, AMPA4 (alpha 4)"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0007268 "synaptic transmission" evidence=ISO]
[GO:0014069 "postsynaptic density" evidence=ISO] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISO]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO]
[GO:0042995 "cell projection" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO;IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050804 "regulation of
synaptic transmission" evidence=ISO] [GO:0051968 "positive
regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95811 GO:GO:0030054
GO:GO:0045211 GO:GO:0030425 GO:GO:0045202 GO:GO:0032281
InterPro:IPR001828 eggNOG:NOG316680 GeneTree:ENSGT00590000082809
GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372 HOVERGEN:HBG051839
GO:GO:0015277 CTD:2893 KO:K05200 OrthoDB:EOG4DBTD0 ChiTaRS:GRIA4
GO:GO:0032983 EMBL:AB022913 EMBL:AB079073 EMBL:BC060697
IPI:IPI00131471 RefSeq:NP_001106651.1 RefSeq:NP_001106652.1
RefSeq:NP_062665.3 UniGene:Mm.209263 ProteinModelPortal:Q9Z2W8
SMR:Q9Z2W8 IntAct:Q9Z2W8 STRING:Q9Z2W8 PhosphoSite:Q9Z2W8
PaxDb:Q9Z2W8 PRIDE:Q9Z2W8 Ensembl:ENSMUST00000063508 GeneID:14802
KEGG:mmu:14802 UCSC:uc009obo.2 InParanoid:Q9Z2W8 BindingDB:Q9Z2W8
ChEMBL:CHEMBL3615 NextBio:286965 Bgee:Q9Z2W8 CleanEx:MM_GRIA4
Genevestigator:Q9Z2W8 GermOnline:ENSMUSG00000025892 Uniprot:Q9Z2W8
Length = 902
Score = 191 (72.3 bits), Expect = 9.7e-19, Sum P(2) = 9.7e-19
Identities = 72/248 (29%), Positives = 106/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +++ E
Sbjct: 649 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTT 708
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 709 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRTPV 768
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+LSE G L K+ NKW EC S + S LSL + G+F I G+A
Sbjct: 769 NLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGLA 828
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 829 MLVALIEF 836
Score = 183 (69.5 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 400 KGYCIDVF-EAAVNL-LPYP---VPHNYIMYG-NGKRNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y VP YG I+N +V ++ K + A+ +
Sbjct: 444 EGYCVDLASEIAKHIGIKYKIAIVPDG--KYGARDADTKIWNGMVGELVYGKAEIAIAPL 501
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 502 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 559
Query: 512 VVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFSTMFFSHRENTVSSL- 555
VV L RF+ E+ GP Q + WFS + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 666
Score = 124 (48.7 bits), Expect = 9.7e-19, Sum P(2) = 9.7e-19
Identities = 67/284 (23%), Positives = 119/284 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + + A + +
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTD---RGYSIL-QAIMEKAGQNGWHVSAICVENFNDVSYR 195
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + I S+G Y +I + L S E
Sbjct: 196 QLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIAN-LGFKDISLERFIH 254
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + +TP + + RWK L +E +P + S AL YD V ++
Sbjct: 255 GGANVT-GFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 308
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A +L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 309 AETFRSLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNV 361
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV--APEI 337
+FD VN DV + TG R++GYW++ L ++ AP +
Sbjct: 362 QFDHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLIQDAPTL 405
Score = 38 (18.4 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 55 SDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+D Y+ + V +++ ++ G + IAI D YG
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYG 473
>UNIPROTKB|F1M3N1 [details] [associations]
symbol:Grin2a "Glutamate receptor ionotropic, NMDA 2A"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2737
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565 IPI:IPI00948725
ProteinModelPortal:F1M3N1 Ensembl:ENSRNOT00000067670
ArrayExpress:F1M3N1 Uniprot:F1M3N1
Length = 1327
Score = 191 (72.3 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 59/237 (24%), Positives = 111/237 (46%)
Query: 372 NGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR 430
N +P R V S NE + K KG+CID+ + + + + G +GK+
Sbjct: 295 NTVPCRKFVKINNSTNEGMNVKKC---CKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 351
Query: 431 -NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWA 489
N ++N ++ +V + AVG +TI R+++VDF+ P++E+G+ V+ SP A
Sbjct: 352 VNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSA 411
Query: 490 FLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEF---RGP--PSQQLVTIFWFS 539
FL+PF+ +W++ L V A+ V++ E+ +N + P PS + W
Sbjct: 412 FLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLL 471
Query: 540 FSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ +F + +N + + +SYTA+L + + ++ Q+ G+
Sbjct: 472 WGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL 528
Score = 112 (44.5 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 46/201 (22%), Positives = 91/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + +
Sbjct: 506 ASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERN-IRNNYPYM 564
Query: 624 ESRLVKL--KNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE--FT 678
+ + + +E+ ++L K G + A + + + + C+ T+G F
Sbjct: 565 HQYMTRFNQRGVEDALVSL----KTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFA 620
Query: 679 KSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSL 738
+G+G A Q+ SP + A+LQ +G+++++ WLT C + + S+L +
Sbjct: 621 TTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT-GICHNEKNEVMS--SQLDI 677
Query: 739 KSFWGLFLICGIACFLALIFF 759
+ G+F + A L+LI F
Sbjct: 678 DNMAGVFYMLAAAMALSLITF 698
Score = 64 (27.6 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLD-STE 175
+ S V +++ + D + I S A+SLG+T + WI +PS++ +TE
Sbjct: 85 IHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWI----VPSLVSGNTE 129
Score = 42 (19.8 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 75 VIAIFVDD-DYG-----RNGISVLGDALSKKRAKISY 105
+I++ DD DY R+G+ +L A S K SY
Sbjct: 139 LISVSYDDWDYSLEARVRDGLGILTTAASSMLEKFSY 175
>RGD|2737 [details] [associations]
symbol:Grin2a "glutamate receptor, ionotropic, N-methyl D-aspartate
2A" species:10116 "Rattus norvegicus" [GO:0001508 "regulation of
action potential" evidence=IMP] [GO:0001964 "startle response"
evidence=ISO] [GO:0001975 "response to amphetamine" evidence=ISO]
[GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP;IDA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IMP;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IMP]
[GO:0005261 "cation channel activity" evidence=ISO;IDA] [GO:0005262
"calcium channel activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006816 "calcium ion transport"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0007611 "learning or memory" evidence=ISO] [GO:0007612 "learning"
evidence=ISO] [GO:0007613 "memory" evidence=ISO;IDA] [GO:0008021
"synaptic vesicle" evidence=ISO] [GO:0008104 "protein localization"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=ISS;IDA]
[GO:0008542 "visual learning" evidence=ISO] [GO:0009416 "response to
light stimulus" evidence=IEP] [GO:0009611 "response to wounding"
evidence=ISO] [GO:0009743 "response to carbohydrate stimulus"
evidence=IEP] [GO:0009986 "cell surface" evidence=ISO] [GO:0010042
"response to manganese ion" evidence=IEP] [GO:0010942 "positive
regulation of cell death" evidence=IDA] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0014075 "response to amine stimulus"
evidence=IEP] [GO:0016020 "membrane" evidence=ISO] [GO:0016595
"glutamate binding" evidence=IDA;IMP] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IDA] [GO:0019233 "sensory perception of pain"
evidence=ISO] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0021510 "spinal cord development" evidence=IEP] [GO:0021766
"hippocampus development" evidence=IEP] [GO:0021987 "cerebral cortex
development" evidence=IEP] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0022843 "voltage-gated cation channel activity" evidence=IMP]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0030431 "sleep"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0033058 "directional locomotion" evidence=ISO] [GO:0034220 "ion
transmembrane transport" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IDA] [GO:0035254
"glutamate receptor binding" evidence=IPI] [GO:0040011 "locomotion"
evidence=ISO] [GO:0042165 "neurotransmitter binding" evidence=IDA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=ISO] [GO:0042220 "response to cocaine" evidence=IEP]
[GO:0042391 "regulation of membrane potential" evidence=ISO]
[GO:0042417 "dopamine metabolic process" evidence=ISO] [GO:0042428
"serotonin metabolic process" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP;ISO] [GO:0042734 "presynaptic membrane"
evidence=ISO;IDA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043065 "positive regulation of apoptotic process" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043197 "dendritic
spine" evidence=IDA] [GO:0045202 "synapse" evidence=ISO;TAS]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0045471
"response to ethanol" evidence=IEP;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IDA] [GO:0048167 "regulation of
synaptic plasticity" evidence=ISO] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=IMP] [GO:0048511
"rhythmic process" evidence=IDA] [GO:0050804 "regulation of synaptic
transmission" evidence=ISO] [GO:0050839 "cell adhesion molecule
binding" evidence=IPI] [GO:0051117 "ATPase binding" evidence=IPI]
[GO:0051262 "protein tetramerization" evidence=IDA] [GO:0051592
"response to calcium ion" evidence=IEP] [GO:0051597 "response to
methylmercury" evidence=IEP] [GO:0051707 "response to other organism"
evidence=IEP] [GO:0051930 "regulation of sensory perception of pain"
evidence=ISO] [GO:0060078 "regulation of postsynaptic membrane
potential" evidence=ISO] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=ISO;IMP] [GO:0060359
"response to ammonium ion" evidence=IEP] [GO:0060992 "response to
fungicide" evidence=IEP] [GO:0070588 "calcium ion transmembrane
transport" evidence=ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IMP] [GO:0071286 "cellular response to magnesium
ion" evidence=IEP] [GO:0071287 "cellular response to manganese ion"
evidence=IEP] [GO:0071294 "cellular response to zinc ion"
evidence=IMP] [GO:0071359 "cellular response to dsRNA" evidence=IEP]
[GO:0071363 "cellular response to growth factor stimulus"
evidence=IEP] [GO:0071396 "cellular response to lipid" evidence=IEP]
[GO:0097110 "scaffold protein binding" evidence=IPI] [GO:2000463
"positive regulation of excitatory postsynaptic membrane potential"
evidence=IDA] [GO:0050966 "detection of mechanical stimulus involved
in sensory perception of pain" evidence=ISO] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060
Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2737 GO:GO:0021987 GO:GO:0021766 GO:GO:0014069 GO:GO:0009986
GO:GO:0008104 GO:GO:0009611 GO:GO:0071363 GO:GO:0022008 GO:GO:0051592
GO:GO:0042493 GO:GO:0045471 GO:GO:0060992 GO:GO:0046872 GO:GO:0042220
GO:GO:0007613 GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008270 GO:GO:0008542 GO:GO:0042734
GO:GO:0043195 GO:GO:0001975 GO:GO:0048511 GO:GO:0030288 GO:GO:0051707
GO:GO:0043065 GO:GO:0009416 GO:GO:0010942 GO:GO:0001508 GO:GO:0009743
GO:GO:0071294 GO:GO:0042177 GO:GO:0021510 GO:GO:0048169 GO:GO:0042417
InterPro:IPR001828 GO:GO:0042428 GO:GO:0014075 GO:GO:0051597
GO:GO:0071230 GO:GO:0071396 GO:GO:0001964 GO:GO:0016595 GO:GO:2000463
GO:GO:0071287 GO:GO:0017146 GO:GO:0071286 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0071359 GO:GO:0022843 GO:GO:0004972 CTD:2903
HOVERGEN:HBG052635 KO:K05209 OrthoDB:EOG4X0MRG GO:GO:0033058
InterPro:IPR018884 Pfam:PF10565 HOGENOM:HOG000113802 EMBL:M91561
EMBL:D13211 EMBL:AF001423 IPI:IPI00326054 PIR:A43274
RefSeq:NP_036705.3 UniGene:Rn.9710 PDB:2A5S PDB:2A5T PDBsum:2A5S
PDBsum:2A5T ProteinModelPortal:Q00959 SMR:Q00959 DIP:DIP-34031N
IntAct:Q00959 MINT:MINT-93314 STRING:Q00959 TCDB:1.A.10.1.6
PhosphoSite:Q00959 PRIDE:Q00959 GeneID:24409 KEGG:rno:24409
UCSC:RGD:2737 InParanoid:Q00959 BindingDB:Q00959 ChEMBL:CHEMBL310
EvolutionaryTrace:Q00959 NextBio:603227 ArrayExpress:Q00959
Genevestigator:Q00959 GermOnline:ENSRNOG00000033942 Uniprot:Q00959
Length = 1464
Score = 191 (72.3 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 59/237 (24%), Positives = 111/237 (46%)
Query: 372 NGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR 430
N +P R V S NE + K KG+CID+ + + + + G +GK+
Sbjct: 432 NTVPCRKFVKINNSTNEGMNVKKC---CKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
Query: 431 -NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWA 489
N ++N ++ +V + AVG +TI R+++VDF+ P++E+G+ V+ SP A
Sbjct: 489 VNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSA 548
Query: 490 FLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEF---RGP--PSQQLVTIFWFS 539
FL+PF+ +W++ L V A+ V++ E+ +N + P PS + W
Sbjct: 549 FLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLL 608
Query: 540 FSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ +F + +N + + +SYTA+L + + ++ Q+ G+
Sbjct: 609 WGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL 665
Score = 113 (44.8 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 46/201 (22%), Positives = 91/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + +
Sbjct: 643 ASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERN-IRNNYPYM 701
Query: 624 ESRLVKL--KNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE--FT 678
+ + + +E+ ++L K G + A + + + + C+ T+G F
Sbjct: 702 HQYMTRFNQRGVEDALVSL----KTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFA 757
Query: 679 KSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSL 738
+G+G A Q+ SP + A+LQ +G+++++ WLT C + + S+L +
Sbjct: 758 STGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT-GICHNEKNEVMS--SQLDI 814
Query: 739 KSFWGLFLICGIACFLALIFF 759
+ G+F + A L+LI F
Sbjct: 815 DNMAGVFYMLAAAMALSLITF 835
Score = 64 (27.6 bits), Expect = 1.2e-18, Sum P(3) = 1.2e-18
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLD-STE 175
+ S V +++ + D + I S A+SLG+T + WI +PS++ +TE
Sbjct: 222 IHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWI----VPSLVSGNTE 266
Score = 42 (19.8 bits), Expect = 2.1e-16, Sum P(3) = 2.1e-16
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 75 VIAIFVDD-DYG-----RNGISVLGDALSKKRAKISY 105
+I++ DD DY R+G+ +L A S K SY
Sbjct: 276 LISVSYDDWDYSLEARVRDGLGILTTAASSMLEKFSY 312
>UNIPROTKB|F1NZT2 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0014054
"positive regulation of gamma-aminobutyric acid secretion"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0030534 "adult behavior" evidence=IEA] [GO:0032230 "positive
regulation of synaptic transmission, GABAergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0048266 "behavioral response to pain" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0035235
GO:GO:0042734 GO:GO:0032230 GO:GO:0051899 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:AADN02010740
EMBL:AADN02010741 IPI:IPI00602891 ProteinModelPortal:F1NZT2
Ensembl:ENSGALT00000025530 Uniprot:F1NZT2
Length = 874
Score = 180 (68.4 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 71/291 (24%), Positives = 129/291 (44%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ +K D AV +TI
Sbjct: 430 EGYCLDLLKELSNILGFIYEVKLVSDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTIT 489
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 490 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 549
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 550 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 609
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 610 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 669
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G+ ++ Y L M T+ E+ T
Sbjct: 670 TYEKMWAFMSSRQQ--TALVKN-NDEGIQRVLTT-DYA-LLMESTSIEYVT 715
Score = 161 (61.7 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 577 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 636
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 637 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVKNNDEGI 694
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 695 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 753
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 754 LQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 807
Query: 763 VCGQF 767
G+F
Sbjct: 808 -IGEF 811
Score = 134 (52.2 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 72/306 (23%), Positives = 124/306 (40%)
Query: 56 DYYQM-HAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGAS 114
DY + AV DLV YY W+ ++ + +D G + L A S+ KI + P +
Sbjct: 122 DYAAISRAVLDLVLYYNWK-IVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGN 178
Query: 115 RSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDST 174
+ A LL + + + +T I S+GM Y + T LD
Sbjct: 179 KDA-RPLLKEMKKGKEFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTTLDLFALD-L 236
Query: 175 EPVDIDTMNLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALY 227
EP +N+ G L P + I +W + L+ +G + A
Sbjct: 237 EPYRYSGVNMT-GFRLLNIENPQVS---SVIEKWSMERLQAPPKPETGLLDGMMTTEAAL 292
Query: 228 AYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMN 287
YD+V++VA A + T S+ L + + G +F+ +
Sbjct: 293 MYDAVYMVAVASQ----RASQMTVSS-----------LQCHRHKPWRFGPRFMNLIKEAR 337
Query: 288 FTGLSGEIRFDADKNLVNPA-YDVLNIGGTGSRRIGYWSNYSGLSVV-APEILYTKPPNS 345
+ GL+G I F+ L D++++ G+ +IG W++YSGL++ + + T +S
Sbjct: 338 WDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEKIGVWNSYSGLNMTDSNKDRSTNITDS 397
Query: 346 SSNRHL 351
+NR L
Sbjct: 398 LANRTL 403
Score = 117 (46.2 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 59/242 (24%), Positives = 91/242 (37%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + PT+ Y DY + AV
Sbjct: 73 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPTVDHKDAFYI--NLYPDYAAISRAV 130
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ ++ + +D G + L A S+ KI + P ++ A LL
Sbjct: 131 LDLVLYYNWK-IVTVVYEDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-RPLLK 186
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I S+GM Y + T LD EP +N
Sbjct: 187 EMKKGKEFYVIFDCSHETAAEILKQILSMGMMTEYYHYFFTTLDLFALD-LEPYRYSGVN 245
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 246 MT-GFRLLNIENPQVS---SVIEKWSMERLQAPPKPETGLLDGMMTTEAALMYDAVYMVA 301
Query: 237 HA 238
A
Sbjct: 302 VA 303
>UNIPROTKB|G3V9C5 [details] [associations]
symbol:Grin2a "RCG49797, isoform CRA_b" species:10116
"Rattus norvegicus" [GO:0001964 "startle response" evidence=IEA]
[GO:0001975 "response to amphetamine" evidence=IEA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005262 "calcium channel
activity" evidence=IEA] [GO:0007613 "memory" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0008542
"visual learning" evidence=IEA] [GO:0009611 "response to wounding"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0019233 "sensory perception of pain"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030431 "sleep" evidence=IEA]
[GO:0033058 "directional locomotion" evidence=IEA] [GO:0042177
"negative regulation of protein catabolic process" evidence=IEA]
[GO:0042417 "dopamine metabolic process" evidence=IEA] [GO:0042428
"serotonin metabolic process" evidence=IEA] [GO:0042493 "response
to drug" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0045471 "response to ethanol" evidence=IEA]
[GO:0048167 "regulation of synaptic plasticity" evidence=IEA]
[GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2737 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 CTD:2903 KO:K05209
OMA:CRSCLSN InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 RefSeq:NP_036705.3 UniGene:Rn.9710
GeneID:24409 KEGG:rno:24409 NextBio:603227 EMBL:CH474017
Ensembl:ENSRNOT00000044626 Uniprot:G3V9C5
Length = 1464
Score = 191 (72.3 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 59/237 (24%), Positives = 111/237 (46%)
Query: 372 NGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR 430
N +P R V S NE + K KG+CID+ + + + + G +GK+
Sbjct: 432 NTVPCRKFVKINNSTNEGMNVKKC---CKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 488
Query: 431 -NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWA 489
N ++N ++ +V + AVG +TI R+++VDF+ P++E+G+ V+ SP A
Sbjct: 489 VNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSA 548
Query: 490 FLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEF---RGP--PSQQLVTIFWFS 539
FL+PF+ +W++ L V A+ V++ E+ +N + P PS + W
Sbjct: 549 FLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLL 608
Query: 540 FSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ +F + +N + + +SYTA+L + + ++ Q+ G+
Sbjct: 609 WGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL 665
Score = 112 (44.5 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 46/201 (22%), Positives = 91/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + +
Sbjct: 643 ASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERN-IRNNYPYM 701
Query: 624 ESRLVKL--KNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE--FT 678
+ + + +E+ ++L K G + A + + + + C+ T+G F
Sbjct: 702 HQYMTRFNQRGVEDALVSL----KTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFA 757
Query: 679 KSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSL 738
+G+G A Q+ SP + A+LQ +G+++++ WLT C + + S+L +
Sbjct: 758 TTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT-GICHNEKNEVMS--SQLDI 814
Query: 739 KSFWGLFLICGIACFLALIFF 759
+ G+F + A L+LI F
Sbjct: 815 DNMAGVFYMLAAAMALSLITF 835
Score = 64 (27.6 bits), Expect = 1.5e-18, Sum P(3) = 1.5e-18
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLD-STE 175
+ S V +++ + D + I S A+SLG+T + WI +PS++ +TE
Sbjct: 222 IHSSVILLYCSKDEAVLILSEARSLGLTGYDFFWI----VPSLVSGNTE 266
Score = 42 (19.8 bits), Expect = 2.6e-16, Sum P(3) = 2.6e-16
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 75 VIAIFVDD-DYG-----RNGISVLGDALSKKRAKISY 105
+I++ DD DY R+G+ +L A S K SY
Sbjct: 276 LISVSYDDWDYSLEARVRDGLGILTTAASSMLEKFSY 312
>UNIPROTKB|P48058 [details] [associations]
symbol:GRIA4 "Glutamate receptor 4" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0032983
"kainate selective glutamate receptor complex" evidence=ISS]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISS]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=ISS]
[GO:0006810 "transport" evidence=TAS] [GO:0007215 "glutamate
receptor signaling pathway" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0007268 "synaptic transmission"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0060992 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0043195 GO:GO:0051968
DrugBank:DB00142 GO:GO:0032281 InterPro:IPR001828 GO:GO:0030666
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 EMBL:U16129 EMBL:AP000641
EMBL:AP000673 EMBL:AP000813 EMBL:AP001561 EMBL:BC045546
EMBL:BC142654 EMBL:BC150209 IPI:IPI00007632 IPI:IPI00791228
RefSeq:NP_000820.3 RefSeq:NP_001070711.2 RefSeq:NP_001070712.1
RefSeq:NP_001106283.1 UniGene:Hs.503743 ProteinModelPortal:P48058
SMR:P48058 MINT:MINT-95403 STRING:P48058 PhosphoSite:P48058
DMDM:218512059 PRIDE:P48058 DNASU:2893 Ensembl:ENST00000282499
Ensembl:ENST00000393125 Ensembl:ENST00000428631
Ensembl:ENST00000530497 GeneID:2893 KEGG:hsa:2893 UCSC:uc001pix.2
CTD:2893 GeneCards:GC11P105514 H-InvDB:HIX0026176 HGNC:HGNC:4574
MIM:138246 neXtProt:NX_P48058 PharmGKB:PA28969 InParanoid:P48058
KO:K05200 OMA:RIGYWND OrthoDB:EOG4DBTD0 PhylomeDB:P48058
BindingDB:P48058 ChEMBL:CHEMBL3190 ChiTaRS:GRIA4 GenomeRNAi:2893
NextBio:11443 ArrayExpress:P48058 Bgee:P48058 CleanEx:HS_GRIA4
Genevestigator:P48058 GO:GO:0032983 Uniprot:P48058
Length = 902
Score = 191 (72.3 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 72/248 (29%), Positives = 106/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +++ E
Sbjct: 649 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTT 708
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 709 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRTPV 768
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+LSE G L K+ NKW EC S + S LSL + G+F I G+A
Sbjct: 769 NLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGLA 828
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 829 MLVALIEF 836
Score = 183 (69.5 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 400 KGYCIDVF-EAAVNL-LPYP---VPHNYIMYG-NGKRNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y VP YG I+N +V ++ K + A+ +
Sbjct: 444 EGYCVDLASEIAKHIGIKYKIAIVPDG--KYGARDADTKIWNGMVGELVYGKAEIAIAPL 501
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 502 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 559
Query: 512 VVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFSTMFFSHRENTVSSL- 555
VV L RF+ E+ GP Q + WFS + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 666
Score = 121 (47.7 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 66/278 (23%), Positives = 117/278 (42%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + + A + +
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTD---RGYSIL-QAIMEKAGQNGWHVSAICVENFNDVSYR 195
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + I S+G Y +I + L S E
Sbjct: 196 QLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIAN-LGFKDISLERFIH 254
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + +TP +K + RWK L +E +P + S AL YD V ++
Sbjct: 255 GGANVT-GFQLVDFNTPMV-IK--LMDRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 308
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A +L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 309 AETFRSLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNV 361
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
+FD VN DV + TG R++GYW++ L ++
Sbjct: 362 QFDHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLI 399
Score = 38 (18.4 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 55 SDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+D Y+ + V +++ ++ G + IAI D YG
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYG 473
>UNIPROTKB|F1NY64 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02016515 EMBL:AADN02016516 EMBL:AADN02016517
EMBL:AADN02016518 EMBL:AADN02016519 IPI:IPI00821646
Ensembl:ENSGALT00000015322 ArrayExpress:F1NY64 Uniprot:F1NY64
Length = 878
Score = 187 (70.9 bits), Expect = 3.0e-18, Sum P(3) = 3.0e-18
Identities = 70/237 (29%), Positives = 101/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 594 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 653
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G D GS + ++ + + +K+ E +AR K
Sbjct: 654 DLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTYMKSAEPSVFVRTTAEGVARVRKSK 713
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+LSE G
Sbjct: 714 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRTPVNLAVLKLSEQG 773
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC S + S LSL + G+F I G+A +ALI F
Sbjct: 774 VLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVAGVFYILVGGLGLAMLVALIEF 830
Score = 182 (69.1 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 64/227 (28%), Positives = 106/227 (46%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ + + + G+GK R+ I+N +V ++ K D A+ +
Sbjct: 438 EGYCVDLATEIAKHCGFK--YKLTIVGDGKYGARDADTKIWNGMVGELVYGKADIAIAPL 495
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 496 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 553
Query: 512 VVWILEHRFN------NEFR-GPPSQQLVT-----IF---WFSFSTMFFSHRENTVSSL- 555
VV L RF+ EF G +Q + IF WFS + + SL
Sbjct: 554 VVLFLVSRFSPYEWHTEEFEDGRETQTNESTNEFGIFNSLWFSLGAFMQQGCDISPRSLS 613
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 614 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLSKQTE 660
Score = 121 (47.7 bits), Expect = 3.0e-18, Sum P(3) = 3.0e-18
Identities = 43/144 (29%), Positives = 64/144 (44%)
Query: 197 DTDLKKNFISRWKNLKYKENSPSGFNSYALYA----YDSVWLVAHALDALLNEGGKFTFS 252
D L FI RW L+ KE P S Y YD+V ++ A L + + S
Sbjct: 261 DDPLVSKFIQRWSTLEEKEY-PGAHTSTIKYTSALTYDAVQVMTEAFRNLRKQ--RIEIS 317
Query: 253 NDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVL 311
D L++ V G G + + L ++ GL+G I+FD + +N +V+
Sbjct: 318 RRGNAGDC------LANPAVPWGHGVEIERALKQVQVEGLTGNIKFDQNGKRINFTINVM 371
Query: 312 NIGGTGSRRIGYWSNYSGLSVVAP 335
+ TG R+IGYWS + VV P
Sbjct: 372 ELKSTGPRKIGYWSEVDKM-VVNP 394
Score = 48 (22.0 bits), Expect = 3.0e-18, Sum P(3) = 3.0e-18
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N P+ S +
Sbjct: 827 LIEFCYKSRAEAKRMKVAKNAQNINPTSSQN 857
>UNIPROTKB|O15399 [details] [associations]
symbol:GRIN2D "Glutamate receptor ionotropic, NMDA 2D"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0001964 "startle
response" evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0051930 "regulation of
sensory perception of pain" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005886 GO:GO:0007268 GO:GO:0051930 GO:GO:0030054
GO:GO:0045211 GO:GO:0008344 GO:GO:0035235 GO:GO:0035249
DrugBank:DB00142 GO:GO:0030288 InterPro:IPR001828 DrugBank:DB00836
GO:GO:0001964 DrugBank:DB01173 GO:GO:0016595 GO:GO:0017146
GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132 GO:GO:0022843
EMBL:AC008403 GO:GO:0004972 OrthoDB:EOG42RD6M EMBL:U77783
EMBL:AC011527 IPI:IPI00006217 RefSeq:NP_000827.2 UniGene:Hs.445015
ProteinModelPortal:O15399 SMR:O15399 IntAct:O15399 MINT:MINT-130143
STRING:O15399 PhosphoSite:O15399 PaxDb:O15399 PRIDE:O15399
Ensembl:ENST00000263269 GeneID:2906 KEGG:hsa:2906 UCSC:uc002pjc.4
CTD:2906 GeneCards:GC19P048898 H-InvDB:HIX0040164 HGNC:HGNC:4588
HPA:HPA038269 MIM:602717 neXtProt:NX_O15399 PharmGKB:PA28982
HOGENOM:HOG000113803 HOVERGEN:HBG052637 InParanoid:O15399 KO:K05212
OMA:ARCGCPR PhylomeDB:O15399 BindingDB:O15399 ChEMBL:CHEMBL2591
GenomeRNAi:2906 NextBio:11507 Bgee:O15399 CleanEx:HS_GRIN2D
Genevestigator:O15399 GermOnline:ENSG00000105464 Uniprot:O15399
Length = 1336
Score = 188 (71.2 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 84/336 (25%), Positives = 148/336 (44%)
Query: 286 MNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNS 345
MN T + + F+ D LVNP+ V+++ T R W + Y P S
Sbjct: 365 MNITWDNRDYSFNEDGFLVNPSLVVISL--TRDRT---WEVVGSWEQQTLRLKY--PLWS 417
Query: 346 SSNRHLYSVIWPGEIT-AT--PRGWVF-----PNNGMPLRIAVPNRVSYNEFVAKDKSPP 397
R L V +T AT R +V P +G +R +VP R N + P
Sbjct: 418 RYGRFLQPVDDTQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSPPPDAP 477
Query: 398 G-----VKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAV 450
KG+CID+ + + + + + G +GK+ + ++N ++ +V + D A+
Sbjct: 478 RPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAI 537
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
G +TI R+++VDF+ P++E+G+ V+ SP AFL+P++ +W++ L V
Sbjct: 538 GSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVV 597
Query: 511 AV-VWILEHR----FNNEFR-GP-PSQQLVTI---FWFSFSTMFFSHR--ENTVSSLGRX 558
AV V+I E+ +N G P TI W ++ +F + EN + +
Sbjct: 598 AVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKI 657
Query: 559 XXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ + G+
Sbjct: 658 MVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGL 693
Score = 95 (38.5 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 45/199 (22%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISSTE----PI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ + G+ D + P+ G V +GS N +
Sbjct: 671 ASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGSTEKN-IRSNYPDM 729
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
S +V+ N AL + K G + A + + + K C+ T+G + F +
Sbjct: 730 HSYMVRY-NQPRVEEALTQ-LKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATT 787
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A + S + A+LQ + +++ + WL+ C D + S+L + +
Sbjct: 788 GYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLS-GICHND--KIEVMSSKLDIDN 844
Query: 741 FWGLFLICGIACFLALIFF 759
G+F + +A L+L+ F
Sbjct: 845 MAGVFYMLLVAMGLSLLVF 863
Score = 79 (32.9 bits), Expect = 3.6e-18, Sum P(3) = 3.6e-18
Identities = 27/154 (17%), Positives = 63/154 (40%)
Query: 12 QSSGIAHVISHVVNELNVPLLSF-GATDPTLTSLQY-PYFLRTTQSDYYQMHAVADLVEY 69
++ +A ++ + + ++P+++ G LT + FL+ S Q+ + +++E
Sbjct: 122 RAPAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQLGSSTEQQLQVIFEVLEE 181
Query: 70 YGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFS--PGASRSAINSLLVGANL 127
Y W +A+ R +S + ++ + PGA + +++ L +
Sbjct: 182 YDWTSFVAVTTRAPGHRAFLSYIEVLTDGSLVGWEHRGALTLDPGAGEAVLSAQLRSVSA 241
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVW 161
+F + +F A+ G+T YVW
Sbjct: 242 QIRLLFCAREEAEP---VFRAAEEAGLTGSGYVW 272
>UNIPROTKB|D4ACE2 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00231401
ProteinModelPortal:D4ACE2 Ensembl:ENSRNOT00000002142
ArrayExpress:D4ACE2 Uniprot:D4ACE2
Length = 834
Score = 175 (66.7 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 70/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 392 EGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 451
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 452 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 511
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 512 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 571
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 572 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 631
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 632 TYEKMWAFMSSRQQS--ALVKNSDEGIQRVLTTD--YA-LLMESTSIEYVT 677
Score = 161 (61.7 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 539 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 598
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 599 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQS--ALVKNSDEGI 656
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 657 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 715
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 716 LQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 769
Query: 763 VCGQF 767
G+F
Sbjct: 770 -IGEF 773
Score = 134 (52.2 bits), Expect = 3.8e-18, Sum P(2) = 3.8e-18
Identities = 81/339 (23%), Positives = 133/339 (39%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ S Y DY + AV
Sbjct: 33 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDSRDLFYI--NLYPDYAAISRAV 90
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P A++ A LL
Sbjct: 91 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPPANKDA-KPLL- 145
Query: 124 GANLMESRVFVV--HVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ +S+ F V + +T I +GM Y + T LD E
Sbjct: 146 -KEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSG 203
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWL 234
+N+ G L P + I +W + L+ +G + A YD+V++
Sbjct: 204 VNMT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYM 259
Query: 235 VAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGE 294
VA A + + T S+ + H L + + R + GL+G
Sbjct: 260 VAIAS----HRASQLTVSS-LQCHRHKPWRLGPRFMNLIKEA--------RARWDGLTGR 306
Query: 295 IRFDADKNLVNPA-YDVLNIGGTGSRRIGYWSNYSGLSV 332
I F+ L D++++ G+ +IG W++ SGL++
Sbjct: 307 ITFNKTDGLRKDFDLDIISLKEEGTEKIGIWNSNSGLNM 345
>UNIPROTKB|E1C2Q1 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0042734 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
GO:GO:0032983 OMA:NRAPERL EMBL:AADN02041869 EMBL:AADN02041870
IPI:IPI00596764 ProteinModelPortal:E1C2Q1
Ensembl:ENSGALT00000010723 Uniprot:E1C2Q1
Length = 869
Score = 184 (69.8 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 71/300 (23%), Positives = 132/300 (44%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+G+C+D+ + +L + + + +YG + N + +V ++ K D AV +TI
Sbjct: 430 EGFCVDMLKELAEILRFNYKIHLVGDGVYGVPEANGTWTGMVGELIARKADLAVAGLTIT 489
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQK-LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ V K ++FL PF+ +WL +L V V+++
Sbjct: 490 AEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFL 549
Query: 516 LEHRFNNEFRGP-PSQQ-----LVTIFWFSFSTMF----FSHRENTVS--SLG-RXXXXX 562
+ E+ P P Q L+ + S F F + +T++ +L R
Sbjct: 550 VARLTPYEWYSPHPCSQGRCNLLINQYSLGNSLWFPVGGFMQQGSTIAPQALSTRCVSGV 609
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELK 621
SSYTA+L + LTVQ++ IE +D L T G G + + +
Sbjct: 610 WWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTTIEYGTIHGGSSMTFFQNSRY 669
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSG 681
R+ ++ S+ + +G +A +++ Y L S N +R T+ G
Sbjct: 670 QTYQRMWNYMYSKQPSVFVKSTEEG--IARVLNS-NYAFLLESTMNEYYRQRNCNLTQVG 726
Score = 154 (59.3 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 54/200 (27%), Positives = 87/200 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ IE +D L T G G + + + R+
Sbjct: 619 SSYTANLAAFLTVQRMDVPIESVDDLADQTTIEYGTIHGGSSMTFFQNSRYQTYQRMWNY 678
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELPYIELFMS-------KTNCEFRTVGQEFTKSGWG 683
++ S+ + +G +A +++ Y L S + NC VG G+G
Sbjct: 679 MYSKQPSVFVKSTEEG--IARVLNS-NYAFLLESTMNEYYRQRNCNLTQVGGLLDTKGYG 735
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWG 743
S + AILQL EN L+ + KW +C + D L +++ G
Sbjct: 736 IGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE---EDHRAKGLGMENIGG 792
Query: 744 LF--LICG--IACFLALIFF 759
+F LICG +A F+A++ F
Sbjct: 793 IFVVLICGLIVAIFMAMLEF 812
Score = 124 (48.7 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 48/205 (23%), Positives = 87/205 (42%)
Query: 129 ESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGV 188
++ +VH N TI A LGM + Y +I T+ S+ +D D +N+L
Sbjct: 196 KTATIIVHANASMSHTILQKAAELGMASAYYTYIFTNLEFSLQRLDSQLD-DRVNILGFS 254
Query: 189 VALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALYAYDSVWLVAHALDALLNEGG 247
+ + H + ++ W+ N + + +S L+ D+V+ V A+ L
Sbjct: 255 IFNQSHAFFQEFVQSLNQSWQENCDHAPFTGPALSSALLF--DAVYAVVSAVQEL----- 307
Query: 248 KFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPA 307
N + + L+ S +++ G + L + GL+G I F++ N A
Sbjct: 308 -----N--RSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYA 360
Query: 308 YDVLNIGGTGSRRIGYWSNYSGLSV 332
+L +G R+IG+W GLS+
Sbjct: 361 LKILQHTHSGFRQIGHWHVSEGLSM 385
Score = 45 (20.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 88 GISVLGDA-LSKKRAKISYKAPFSPG 112
GIS+L + +K S+ PFSPG
Sbjct: 506 GISILYRVHMGRKPGYFSFLDPFSPG 531
>UNIPROTKB|F1MLZ9 [details] [associations]
symbol:GRIN2A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0051930 "regulation of sensory
perception of pain" evidence=IEA] [GO:0048167 "regulation of
synaptic plasticity" evidence=IEA] [GO:0045471 "response to
ethanol" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042428 "serotonin metabolic process" evidence=IEA] [GO:0042417
"dopamine metabolic process" evidence=IEA] [GO:0042177 "negative
regulation of protein catabolic process" evidence=IEA] [GO:0033058
"directional locomotion" evidence=IEA] [GO:0030431 "sleep"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0019233
"sensory perception of pain" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0009611 "response to
wounding" evidence=IEA] [GO:0008542 "visual learning" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007613
"memory" evidence=IEA] [GO:0005262 "calcium channel activity"
evidence=IEA] [GO:0004972 "N-methyl-D-aspartate selective glutamate
receptor activity" evidence=IEA] [GO:0001975 "response to
amphetamine" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0048167
GO:GO:0014069 GO:GO:0009986 GO:GO:0008104 GO:GO:0009611
GO:GO:0022008 GO:GO:0042493 GO:GO:0045471 GO:GO:0007613
GO:GO:0019233 GO:GO:0030431 GO:GO:0005262 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0008542
GO:GO:0060079 GO:GO:0042734 GO:GO:0001975 GO:GO:0030288
GO:GO:0043065 GO:GO:0042177 GO:GO:0042417 GO:GO:0042428
GO:GO:0001964 GO:GO:0017146 GO:GO:0005234 GO:GO:0004972 OMA:CRSCLSN
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:DAAA02057431 IPI:IPI00715468
Ensembl:ENSBTAT00000010376 Uniprot:F1MLZ9
Length = 1091
Score = 192 (72.6 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 59/237 (24%), Positives = 112/237 (47%)
Query: 372 NGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR 430
N +P R V S NE + K KG+CID+ + + + + G +GK+
Sbjct: 59 NTVPCRKFVKINNSTNEGMNVKKC---CKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKK 115
Query: 431 -NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWA 489
N ++N ++ +V ++ AVG +TI R+++VDF+ P++E+G+ V+ SP A
Sbjct: 116 VNNVWNGMIGEVVYHRAVMAVGSLTINEERSEVVDFSVPFVETGISVMVSRSNGTVSPSA 175
Query: 490 FLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEF---RGP--PSQQLVTIFWFS 539
FL+PF+ +W++ L V A+ V++ E+ +N + P PS + W
Sbjct: 176 FLEPFSASVWVMMFVMLLIVSAIAVFVFEYFSPVGYNRNLAKGKAPHGPSFTIGKAIWLL 235
Query: 540 FSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ +F + +N + + +SYTA+L + + ++ Q+ G+
Sbjct: 236 WGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL 292
Score = 118 (46.6 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 48/201 (23%), Positives = 91/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS----TEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ D + P G V +GS N + +
Sbjct: 270 ASYTANLAAFMIQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERN-IRNNYPYM 328
Query: 624 ESRLVKL--KNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE--FT 678
+ K K +E+ ++L K G + A + + + + C+ T+G F
Sbjct: 329 HQYMTKFNQKGVEDALVSL----KTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFA 384
Query: 679 KSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSL 738
+G+G A Q+ SP + A+LQ +G+++++ WLT C + + S+L +
Sbjct: 385 TTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELETLWLT-GICHNEKNEVMS--SQLDI 441
Query: 739 KSFWGLFLICGIACFLALIFF 759
+ G+F + A L+LI F
Sbjct: 442 DNMAGVFYMLAAAMALSLITF 462
>MGI|MGI:95823 [details] [associations]
symbol:Grin2d "glutamate receptor, ionotropic, NMDA2D (epsilon
4)" species:10090 "Mus musculus" [GO:0001964 "startle response"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IMP;IDA] [GO:0005215 "transporter activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IMP] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016595 "glutamate binding" evidence=ISO] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO] [GO:0022843 "voltage-gated cation channel activity"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IMP;IDA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISO] [GO:0042165 "neurotransmitter binding"
evidence=ISO] [GO:0045202 "synapse" evidence=IDA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IMP] [GO:0051930 "regulation of sensory perception of
pain" evidence=IMP] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95823 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008344 GO:GO:0045202
GO:GO:0035249 GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964
GO:GO:0016595 GO:GO:0017146 GO:GO:0042165 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0022843 GO:GO:0004972
GeneTree:ENSGT00540000070221 OrthoDB:EOG42RD6M CTD:2906
HOGENOM:HOG000113803 HOVERGEN:HBG052637 KO:K05212 OMA:ARCGCPR
EMBL:AB154245 EMBL:D12822 IPI:IPI00131279 PIR:S27224
RefSeq:NP_032198.2 UniGene:Mm.322594 ProteinModelPortal:Q03391
SMR:Q03391 IntAct:Q03391 STRING:Q03391 PhosphoSite:Q03391
PaxDb:Q03391 PRIDE:Q03391 Ensembl:ENSMUST00000002848 GeneID:14814
KEGG:mmu:14814 InParanoid:Q03391 BindingDB:Q03391 ChEMBL:CHEMBL2893
NextBio:287011 Bgee:Q03391 Genevestigator:Q03391
GermOnline:ENSMUSG00000002771 Uniprot:Q03391
Length = 1323
Score = 188 (71.2 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 84/336 (25%), Positives = 148/336 (44%)
Query: 286 MNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNS 345
MN T + + F+ D LVNP+ V+++ T R W + Y P S
Sbjct: 362 MNITWDNRDYSFNEDGFLVNPSLVVISL--TRDRT---WEVVGSWEQQTLRLKY--PLWS 414
Query: 346 SSNRHLYSVIWPGEIT-AT--PRGWVF-----PNNGMPLRIAVPNRVSYNEFVAKDKSPP 397
R L V +T AT R +V P +G +R +VP R N + P
Sbjct: 415 RYGRFLQPVDDTQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSPPPDAP 474
Query: 398 G-----VKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAV 450
KG+CID+ + + + + + G +GK+ + ++N ++ +V + D A+
Sbjct: 475 RPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAI 534
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
G +TI R+++VDF+ P++E+G+ V+ SP AFL+P++ +W++ L V
Sbjct: 535 GSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVV 594
Query: 511 AV-VWILEHR----FNNEFR-GP-PSQQLVTI---FWFSFSTMFFSHR--ENTVSSLGRX 558
AV V+I E+ +N G P TI W ++ +F + EN + +
Sbjct: 595 AVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKI 654
Query: 559 XXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ + G+
Sbjct: 655 MVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGL 690
Score = 95 (38.5 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 45/199 (22%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISSTE----PI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ + G+ D + P+ G V +GS N +
Sbjct: 668 ASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGSTEKN-IRSNYPDM 726
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
S +V+ N AL + K G + A + + + K C+ T+G + F +
Sbjct: 727 HSYMVRY-NQPRVEEALTQ-LKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATT 784
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A + S + A+LQ + +++ + WL+ C D + S+L + +
Sbjct: 785 GYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLS-GICHND--KIEVMSSKLDIDN 841
Query: 741 FWGLFLICGIACFLALIFF 759
G+F + +A L+L+ F
Sbjct: 842 MAGVFYMLLVAMGLSLLVF 860
Score = 76 (31.8 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 27/154 (17%), Positives = 62/154 (40%)
Query: 12 QSSGIAHVISHVVNELNVPLLSF-GATDPTLTSLQY-PYFLRTTQSDYYQMHAVADLVEY 69
++ +A ++ + + ++P+++ G LT + FL+ S Q+ + +++E
Sbjct: 119 RAPAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQLGSSTEQQLQVIFEVLEE 178
Query: 70 YGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFS--PGASRSAINSLLVGANL 127
Y W +A+ R +S + ++ + PGA + + + L +
Sbjct: 179 YDWTSFVAVTTRAPGHRAFLSYIEVLTDGSLVGWEHRGALTLDPGAGEAVLGAQLRSVSA 238
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVW 161
+F + +F A+ G+T YVW
Sbjct: 239 QIRLLFCAREEAEP---VFRAAEEAGLTGPGYVW 269
>RGD|2740 [details] [associations]
symbol:Grin2d "glutamate receptor, ionotropic, N-methyl D-aspartate
2D" species:10116 "Rattus norvegicus" [GO:0001964 "startle response"
evidence=ISO] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA;IDA] [GO:0004972 "N-methyl-D-aspartate selective
glutamate receptor activity" evidence=ISO;IDA;IMP] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005261 "cation channel activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=TAS] [GO:0008344 "adult locomotory
behavior" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016595 "glutamate binding" evidence=IMP]
[GO:0017146 "N-methyl-D-aspartate selective glutamate receptor
complex" evidence=IDA] [GO:0022843 "voltage-gated cation channel
activity" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IDA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IMP] [GO:0042165 "neurotransmitter binding" evidence=IMP]
[GO:0045202 "synapse" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051930 "regulation of sensory perception
of pain" evidence=ISO] [GO:0050966 "detection of mechanical stimulus
involved in sensory perception of pain" evidence=ISO] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2740
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0008344 GO:GO:0035249
GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964 GO:GO:0016595
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0022843 GO:GO:0004972 OrthoDB:EOG42RD6M CTD:2906
HOGENOM:HOG000113803 HOVERGEN:HBG052637 KO:K05212 EMBL:D13213
EMBL:D13214 EMBL:L31611 EMBL:L31612 EMBL:U08260 IPI:IPI00207093
IPI:IPI00231059 PIR:I78557 RefSeq:NP_073634.1 UniGene:Rn.91209
PDB:3OEK PDB:3OEL PDB:3OEM PDB:3OEN PDBsum:3OEK PDBsum:3OEL
PDBsum:3OEM PDBsum:3OEN ProteinModelPortal:Q62645 SMR:Q62645
IntAct:Q62645 MINT:MINT-103662 STRING:Q62645 PhosphoSite:Q62645
GeneID:24412 KEGG:rno:24412 UCSC:RGD:2740 InParanoid:Q62645
BindingDB:Q62645 ChEMBL:CHEMBL303 EvolutionaryTrace:Q62645
NextBio:603239 ArrayExpress:Q62645 Genevestigator:Q62645
GermOnline:ENSRNOG00000021063 Uniprot:Q62645
Length = 1323
Score = 188 (71.2 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 84/336 (25%), Positives = 148/336 (44%)
Query: 286 MNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNS 345
MN T + + F+ D LVNP+ V+++ T R W + Y P S
Sbjct: 362 MNITWDNRDYSFNEDGFLVNPSLVVISL--TRDRT---WEVVGSWEQQTLRLKY--PLWS 414
Query: 346 SSNRHLYSVIWPGEIT-AT--PRGWVF-----PNNGMPLRIAVPNRVSYNEFVAKDKSPP 397
R L V +T AT R +V P +G +R +VP R N + P
Sbjct: 415 RYGRFLQPVDDTQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSPPPDAP 474
Query: 398 G-----VKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAV 450
KG+CID+ + + + + + G +GK+ + ++N ++ +V + D A+
Sbjct: 475 RPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAI 534
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
G +TI R+++VDF+ P++E+G+ V+ SP AFL+P++ +W++ L V
Sbjct: 535 GSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVV 594
Query: 511 AV-VWILEHR----FNNEFR-GP-PSQQLVTI---FWFSFSTMFFSHR--ENTVSSLGRX 558
AV V+I E+ +N G P TI W ++ +F + EN + +
Sbjct: 595 AVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKI 654
Query: 559 XXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ + G+
Sbjct: 655 MVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGL 690
Score = 95 (38.5 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 45/199 (22%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISSTE----PI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ + G+ D + P+ G V +GS N +
Sbjct: 668 ASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGSTEKN-IRSNYPDM 726
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
S +V+ N AL + K G + A + + + K C+ T+G + F +
Sbjct: 727 HSYMVRY-NQPRVEEALTQ-LKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATT 784
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A + S + A+LQ + +++ + WL+ C D + S+L + +
Sbjct: 785 GYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLS-GICHND--KIEVMSSKLDIDN 841
Query: 741 FWGLFLICGIACFLALIFF 759
G+F + +A L+L+ F
Sbjct: 842 MAGVFYMLLVAMGLSLLVF 860
Score = 76 (31.8 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 27/154 (17%), Positives = 62/154 (40%)
Query: 12 QSSGIAHVISHVVNELNVPLLSF-GATDPTLTSLQY-PYFLRTTQSDYYQMHAVADLVEY 69
++ +A ++ + + ++P+++ G LT + FL+ S Q+ + +++E
Sbjct: 119 RAPAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQLGSSTEQQLQVIFEVLEE 178
Query: 70 YGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFS--PGASRSAINSLLVGANL 127
Y W +A+ R +S + ++ + PGA + + + L +
Sbjct: 179 YDWTSFVAVTTRAPGHRAFLSYIEVLTDGSLVGWEHRGALTLDPGAGEAVLGAQLRSVSA 238
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVW 161
+F + +F A+ G+T YVW
Sbjct: 239 QIRLLFCAREEAEP---VFRAAEEAGLTGPGYVW 269
>UNIPROTKB|Q62645 [details] [associations]
symbol:Grin2d "Glutamate receptor ionotropic, NMDA 2D"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2740 GO:GO:0051930
GO:GO:0030054 GO:GO:0045211 GO:GO:0008344 GO:GO:0035249
GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964 GO:GO:0016595
GO:GO:0017146 GO:GO:0042165 GO:GO:0005234 eggNOG:NOG282132
GO:GO:0022843 GO:GO:0004972 OrthoDB:EOG42RD6M CTD:2906
HOGENOM:HOG000113803 HOVERGEN:HBG052637 KO:K05212 EMBL:D13213
EMBL:D13214 EMBL:L31611 EMBL:L31612 EMBL:U08260 IPI:IPI00207093
IPI:IPI00231059 PIR:I78557 RefSeq:NP_073634.1 UniGene:Rn.91209
PDB:3OEK PDB:3OEL PDB:3OEM PDB:3OEN PDBsum:3OEK PDBsum:3OEL
PDBsum:3OEM PDBsum:3OEN ProteinModelPortal:Q62645 SMR:Q62645
IntAct:Q62645 MINT:MINT-103662 STRING:Q62645 PhosphoSite:Q62645
GeneID:24412 KEGG:rno:24412 UCSC:RGD:2740 InParanoid:Q62645
BindingDB:Q62645 ChEMBL:CHEMBL303 EvolutionaryTrace:Q62645
NextBio:603239 ArrayExpress:Q62645 Genevestigator:Q62645
GermOnline:ENSRNOG00000021063 Uniprot:Q62645
Length = 1323
Score = 188 (71.2 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 84/336 (25%), Positives = 148/336 (44%)
Query: 286 MNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNS 345
MN T + + F+ D LVNP+ V+++ T R W + Y P S
Sbjct: 362 MNITWDNRDYSFNEDGFLVNPSLVVISL--TRDRT---WEVVGSWEQQTLRLKY--PLWS 414
Query: 346 SSNRHLYSVIWPGEIT-AT--PRGWVF-----PNNGMPLRIAVPNRVSYNEFVAKDKSPP 397
R L V +T AT R +V P +G +R +VP R N + P
Sbjct: 415 RYGRFLQPVDDTQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSPPPDAP 474
Query: 398 G-----VKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAV 450
KG+CID+ + + + + + G +GK+ + ++N ++ +V + D A+
Sbjct: 475 RPEKRCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAI 534
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
G +TI R+++VDF+ P++E+G+ V+ SP AFL+P++ +W++ L V
Sbjct: 535 GSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVV 594
Query: 511 AV-VWILEHR----FNNEFR-GP-PSQQLVTI---FWFSFSTMFFSHR--ENTVSSLGRX 558
AV V+I E+ +N G P TI W ++ +F + EN + +
Sbjct: 595 AVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKI 654
Query: 559 XXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ + G+
Sbjct: 655 MVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGL 690
Score = 95 (38.5 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 45/199 (22%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISSTE----PI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ + G+ D + P+ G V +GS N +
Sbjct: 668 ASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGSTEKN-IRSNYPDM 726
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
S +V+ N AL + K G + A + + + K C+ T+G + F +
Sbjct: 727 HSYMVRY-NQPRVEEALTQ-LKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATT 784
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A + S + A+LQ + +++ + WL+ C D + S+L + +
Sbjct: 785 GYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLS-GICHND--KIEVMSSKLDIDN 841
Query: 741 FWGLFLICGIACFLALIFF 759
G+F + +A L+L+ F
Sbjct: 842 MAGVFYMLLVAMGLSLLVF 860
Score = 76 (31.8 bits), Expect = 7.0e-18, Sum P(3) = 7.0e-18
Identities = 27/154 (17%), Positives = 62/154 (40%)
Query: 12 QSSGIAHVISHVVNELNVPLLSF-GATDPTLTSLQY-PYFLRTTQSDYYQMHAVADLVEY 69
++ +A ++ + + ++P+++ G LT + FL+ S Q+ + +++E
Sbjct: 119 RAPAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQLGSSTEQQLQVIFEVLEE 178
Query: 70 YGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFS--PGASRSAINSLLVGANL 127
Y W +A+ R +S + ++ + PGA + + + L +
Sbjct: 179 YDWTSFVAVTTRAPGHRAFLSYIEVLTDGSLVGWEHRGALTLDPGAGEAVLGAQLRSVSA 238
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVW 161
+F + +F A+ G+T YVW
Sbjct: 239 QIRLLFCAREEAEP---VFRAAEEAGLTGPGYVW 269
>ZFIN|ZDB-GENE-020125-4 [details] [associations]
symbol:gria2b "glutamate receptor, ionotropic, AMPA
2b" species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
ZFIN:ZDB-GENE-020125-4 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234372 HOVERGEN:HBG051839
HSSP:P19491 EMBL:AF361751 IPI:IPI00513119 UniGene:Dr.81161
ProteinModelPortal:Q90XP6 SMR:Q90XP6 InParanoid:Q90XP6
ArrayExpress:Q90XP6 Uniprot:Q90XP6
Length = 897
Score = 181 (68.8 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 65/226 (28%), Positives = 105/226 (46%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGK------RNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ AA + + G+GK I+N +V ++ K D AV +
Sbjct: 440 EGYCVDL--AAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNGMVGELVYGKADIAVAPL 497
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 498 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 555
Query: 512 VVWILEHRFNN-EFRGPPSQ--QLVT--------IF---WFSFSTMFFSHRENTVSSL-G 556
VV L RF+ E+ + Q+ T IF WFS + + SL G
Sbjct: 556 VVLFLVSRFSPYEWHTEEYEDGQIQTNESTNEFGIFNSLWFSLGAFMRQGCDISPRSLPG 615
Query: 557 RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
R SSYTA+L + LTV+++ S IE + L TE
Sbjct: 616 RIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 661
Score = 173 (66.0 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 67/237 (28%), Positives = 99/237 (41%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 595 WFSLGAFMRQGCDISPRSLPGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 654
Query: 596 SLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEE--YSIALARGP----KGG 647
L TE G D GS + ++ + + +K E + A G K
Sbjct: 655 DLAKQTEIAYGTLDSGSTKEFFRRSKIALFDKMWTYMKGAEPSVFVKTTAEGVMRVRKSK 714
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 715 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLGNAVNLAVLKLNEQG 774
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +AL+ F
Sbjct: 775 LLDKLKNKWWYDKGECGTGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALVEF 831
Score = 126 (49.4 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 65/280 (23%), Positives = 110/280 (39%)
Query: 66 LVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKIS------YKAPFSPGASRSAIN 119
L+EYY W + A D D G + V+ D ++K+ +++ K A RS
Sbjct: 138 LIEYYKW-DKFAYLYDSDRGLTTLQVVLDTAAEKKWQVTAINVGNMKDERKDEAYRSLFQ 196
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
L N E RV ++ D I ++G Y +I + L V +
Sbjct: 197 DL---ENKKERRV-ILDCEQDKVKDIMEQVITIGRHVKGYHYIIAN-LGFVDGDLSKIQY 251
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE--NSPSGFNSYALYAYDSVWLVAH 237
N+ G + P L F RW+ L+ KE + S + YD+V ++
Sbjct: 252 GGANV-SGFQIVDFDDP---LVSKFDQRWEALEEKEYPGADSKIRYTSALTYDAVQVMTE 307
Query: 238 ALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRF 297
A L + + S NG L ++ + G + + L ++ GL+G I+F
Sbjct: 308 AFRYLHKQ--RIDISR----RANNGDCLANPAVP-WAQGVEIERALKQVRVDGLTGNIQF 360
Query: 298 DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEI 337
D VN V+ + G+ +IGYW+ + V ++
Sbjct: 361 DQYGKRVNYTVHVMELKSNGAVKIGYWNEVDKMVVTKSDL 400
Score = 38 (18.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 8/37 (21%), Positives = 19/37 (51%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYG 85
F+ + + Y + A++ ++ G++ + I D YG
Sbjct: 433 FMDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYG 469
>ZFIN|ZDB-GENE-041008-124 [details] [associations]
symbol:grin2da "glutamate receptor, ionotropic,
N-methyl D-aspartate 2D, a" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-041008-124
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 GeneTree:ENSGT00540000070221
OrthoDB:EOG42RD6M EMBL:BX950852 IPI:IPI00650738
ProteinModelPortal:I3NI77 Ensembl:ENSDART00000128837 Bgee:I3NI77
Uniprot:I3NI77
Length = 1916
Score = 211 (79.3 bits), Expect = 7.8e-18, Sum P(3) = 7.8e-18
Identities = 87/351 (24%), Positives = 156/351 (44%)
Query: 272 VFDGGQ-QFLQTLLRM--NFTGLSG-EIRFDADKNLVNPAYDVLNI-GGTGSRRIGYWSN 326
+ DG Q Q + +R N T LSG + F+ D L NP DV++ G G +G+W N
Sbjct: 371 MMDGNQTQRVPGRIRFFSNIT-LSGRDYSFNNDGYLANPLLDVISYTAGRGWEEVGWWEN 429
Query: 327 ------YSGLSVVAPEILYTKPPNSSSNRHLYSVIWPGEITATPRGWVFPNNGMPLRIAV 380
Y S P + KP + S + + ++ + P P G +R +V
Sbjct: 430 GVLRLRYPPWSRYGP---FLKPLDDSQHLRVVTLEERPFVIVEPAD---PGTGSCIRDSV 483
Query: 381 PNRVSYNEFVAKD---KSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYN 435
P R+ N + + KG+CIDV + ++ + + G +GK + +N
Sbjct: 484 PCRLPLNNSMVVEGIQSMKHCCKGFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNIDGQWN 543
Query: 436 DIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFT 495
+V +V + D A+G +TI R+++V+F+ P++E+G+ V+ SP AFL+P++
Sbjct: 544 GMVGEVVSKRADMAIGSLTINEERSEVVEFSVPFVETGISVMVSRSNGTVSPSAFLEPYS 603
Query: 496 IPMWLVTGGFFLFVGAV-VWILEH----RFNNEFRGPPSQ--QLVTI---FWFSFSTMFF 545
+W++ L V AV V+I E +N + + TI W ++ +F
Sbjct: 604 PAVWVMMFVMCLSVVAVTVFIFEFFSPVGYNRSLQSGKTAGGSKFTIGKSIWLLWALVFN 663
Query: 546 SHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ EN + + +SYTA+L + + ++ + G+
Sbjct: 664 NSVPVENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGL 714
Score = 94 (38.1 bits), Expect = 7.8e-18, Sum P(3) = 7.8e-18
Identities = 47/199 (23%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISS-TE---PI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ + G+ D TE P+ G V +GS N +
Sbjct: 692 ASYTANLAAFMIQEEYIDTVSGLSDKKFQHPTEQYPPLRFGTVPNGSTEEN-IRSNYPNM 750
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
+V+ N A+ K G + A + + + K C+ T+G + F +
Sbjct: 751 HQYMVR-NNQRGVEDAI-ENLKTGKLDAFIYDAAVLNYMARKDEGCKVMTIGSGKVFATT 808
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A ++S L A+LQL + ++ + WL+ C D + S+L + +
Sbjct: 809 GYGVALHKNSRWKRPLDLALLQLVGDDEIDMLERLWLS-GICHND--KIEVMSSKLDIDN 865
Query: 741 FWGLFLICGIACFLALIFF 759
G+F + +A L+L+ F
Sbjct: 866 MAGVFYMLLVAMGLSLLVF 884
Score = 58 (25.5 bits), Expect = 7.8e-18, Sum P(3) = 7.8e-18
Identities = 37/207 (17%), Positives = 82/207 (39%)
Query: 11 PQSSGIAHVISHVVNELNVPLLSFGA-----TDPTLTSLQYPYFLRTTQSDYYQMHAVAD 65
P + +A ++ V + VP+++ G +P + Y F +T Q+ + +
Sbjct: 152 PNRAPLAPMLEFVSAQTGVPVIAVGGGAGLGREPQESGSVYLQFSCSTD---LQLEVIFE 208
Query: 66 LVEYYGWREVIAIFVDDDYGRNGISVLGDALS-------KKRAKISYKAPFSPGASRSAI 118
++E + W ++ +G + + + ++++ + PG +R+
Sbjct: 209 VLEEFDWT-AFSVVTTRHHGYEDFLAMVEGMIDGSFIGWERKSVVMLNLTDDPGGARTR- 266
Query: 119 NSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIAT---------DWLPS 169
L+ N E++V +++ + + IF A + G S++W A + LP
Sbjct: 267 --RLLKEN--EAQVRLLYCSQEEAEQIFKAAWASGQATPSHMWFAVGPGLSGLGLEGLPK 322
Query: 170 VLDSTEPV---DIDTMNLLQGVVALRH 193
L + P D + +GV L H
Sbjct: 323 ALFAVRPQGWRDEPRRRIAKGVSVLTH 349
>UNIPROTKB|G3V6W0 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
EMBL:CH474089 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
CTD:2893 KO:K05200 RefSeq:NP_058959.2 UniGene:Rn.10938 GeneID:29629
KEGG:rno:29629 NextBio:609852 ProteinModelPortal:G3V6W0
Ensembl:ENSRNOT00000009514 Uniprot:G3V6W0
Length = 902
Score = 191 (72.3 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 72/248 (29%), Positives = 106/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +++ E
Sbjct: 649 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTT 708
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 709 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRTPV 768
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+LSE G L K+ NKW EC S + S LSL + G+F I G+A
Sbjct: 769 NLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVGGLGLA 828
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 829 MLVALIEF 836
Score = 183 (69.5 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 400 KGYCIDVF-EAAVNL-LPYP---VPHNYIMYG-NGKRNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y VP YG I+N +V ++ K + A+ +
Sbjct: 444 EGYCVDLASEIAKHIGIKYKIAIVPDG--KYGARDADTKIWNGMVGELVYGKAEIAIAPL 501
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 502 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 559
Query: 512 VVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFSTMFFSHRENTVSSL- 555
VV L RF+ E+ GP Q + WFS + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 666
Score = 123 (48.4 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 65/278 (23%), Positives = 116/278 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + + A + +
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTD---RGYSIL-QAIMEKAGQNGWHVSAICVENFNDVSYR 195
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + I S+G Y +I + L S E
Sbjct: 196 QLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIAN-LGFKDISLERFIH 254
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + +TP + + RWK L +E +P + S AL YD V ++
Sbjct: 255 GGANVT-GFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 308
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A +L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 309 AETFRSLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNV 361
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
+FD VN DV + TG R++GYW++ L ++
Sbjct: 362 QFDHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLI 399
Score = 38 (18.4 bits), Expect = 8.2e-10, Sum P(2) = 8.2e-10
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 55 SDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+D Y+ + V +++ ++ G + IAI D YG
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYG 473
Score = 37 (18.1 bits), Expect = 1.0e-17, Sum P(3) = 1.0e-17
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVD--FTQPYM 470
+ND+ + V + D + NRT +V PY+
Sbjct: 390 WNDMDKLVLIQDMPTLGNDTAAIENRTVVVTTIMESPYV 428
>UNIPROTKB|G3V6W1 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
EMBL:CH474089 InterPro:IPR001828 GeneTree:ENSGT00590000082809
GO:GO:0005234 GO:GO:0004970 CTD:2893 KO:K05200 OMA:RIGYWND
RefSeq:NP_001106655.1 UniGene:Rn.10938 GeneID:29629 KEGG:rno:29629
NextBio:609852 ProteinModelPortal:G3V6W1 Ensembl:ENSRNOT00000009542
Uniprot:G3V6W1
Length = 902
Score = 184 (69.8 bits), Expect = 5.9e-17, Sum P(3) = 5.9e-17
Identities = 70/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +++ E
Sbjct: 649 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTT 708
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 709 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRNAV 768
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 769 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 828
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 829 MLVALIEF 836
Score = 183 (69.5 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 400 KGYCIDVF-EAAVNL-LPYP---VPHNYIMYG-NGKRNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y VP YG I+N +V ++ K + A+ +
Sbjct: 444 EGYCVDLASEIAKHIGIKYKIAIVPDG--KYGARDADTKIWNGMVGELVYGKAEIAIAPL 501
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 502 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 559
Query: 512 VVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFSTMFFSHRENTVSSL- 555
VV L RF+ E+ GP Q + WFS + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 666
Score = 123 (48.4 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 65/278 (23%), Positives = 116/278 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + + A + +
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTD---RGYSIL-QAIMEKAGQNGWHVSAICVENFNDVSYR 195
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + I S+G Y +I + L S E
Sbjct: 196 QLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIAN-LGFKDISLERFIH 254
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + +TP + + RWK L +E +P + S AL YD V ++
Sbjct: 255 GGANVT-GFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 308
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A +L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 309 AETFRSLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNV 361
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
+FD VN DV + TG R++GYW++ L ++
Sbjct: 362 QFDHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLI 399
Score = 38 (18.4 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 55 SDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+D Y+ + V +++ ++ G + IAI D YG
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYG 473
Score = 37 (18.1 bits), Expect = 5.9e-17, Sum P(3) = 5.9e-17
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVD--FTQPYM 470
+ND+ + V + D + NRT +V PY+
Sbjct: 390 WNDMDKLVLIQDMPTLGNDTAAIENRTVVVTTIMESPYV 428
>RGD|61863 [details] [associations]
symbol:Gria4 "glutamate receptor, ionotropic, AMPA 4"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IMP;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007268 "synaptic
transmission" evidence=IMP;TAS] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=TAS] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030425 "dendrite" evidence=IDA;IMP] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IDA] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043195 "terminal
bouton" evidence=IDA] [GO:0045202 "synapse" evidence=ISO;IMP]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0050803
"regulation of synapse structure and activity" evidence=TAS]
[GO:0050804 "regulation of synaptic transmission" evidence=IMP]
[GO:0051968 "positive regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0060992 "response to fungicide"
evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0014069
GO:GO:0060992 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0050803 GO:GO:0043195 GO:GO:0051968 GO:GO:0032281
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234
HOGENOM:HOG000234372 HOVERGEN:HBG051839 GO:GO:0015277 CTD:2893
KO:K05200 OrthoDB:EOG4DBTD0 GO:GO:0032983 EMBL:M36421 EMBL:M85037
EMBL:M38063 EMBL:S94371 IPI:IPI00195445 IPI:IPI00231131
IPI:IPI00231132 PIR:A44839 PIR:D40170 RefSeq:NP_001106655.1
RefSeq:NP_058959.2 UniGene:Rn.10938 PDB:3EN3 PDB:3EPE PDB:3FAS
PDB:3FAT PDB:3KEI PDB:3KFM PDB:4GPA PDBsum:3EN3 PDBsum:3EPE
PDBsum:3FAS PDBsum:3FAT PDBsum:3KEI PDBsum:3KFM PDBsum:4GPA
ProteinModelPortal:P19493 SMR:P19493 DIP:DIP-41142N MINT:MINT-86166
STRING:P19493 TCDB:1.A.10.1.2 PhosphoSite:P19493 PRIDE:P19493
GeneID:29629 KEGG:rno:29629 UCSC:RGD:61863 InParanoid:P19493
BindingDB:P19493 ChEMBL:CHEMBL3505 EvolutionaryTrace:P19493
NextBio:609852 ArrayExpress:P19493 Genevestigator:P19493
GermOnline:ENSRNOG00000006957 Uniprot:P19493
Length = 902
Score = 183 (69.5 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 400 KGYCIDVF-EAAVNL-LPYP---VPHNYIMYG-NGKRNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y VP YG I+N +V ++ K + A+ +
Sbjct: 444 EGYCVDLASEIAKHIGIKYKIAIVPDG--KYGARDADTKIWNGMVGELVYGKAEIAIAPL 501
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 502 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 559
Query: 512 VVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFSTMFFSHRENTVSSL- 555
VV L RF+ E+ GP Q + WFS + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 666
Score = 183 (69.5 bits), Expect = 7.5e-17, Sum P(3) = 7.5e-17
Identities = 70/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +++ E
Sbjct: 649 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTT 708
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 709 AEGVARVRKSKGKFAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGSSLGNAV 768
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 769 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 828
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 829 MLVALIEF 836
Score = 123 (48.4 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 65/278 (23%), Positives = 116/278 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + + A + +
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTD---RGYSIL-QAIMEKAGQNGWHVSAICVENFNDVSYR 195
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + I S+G Y +I + L S E
Sbjct: 196 QLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIAN-LGFKDISLERFIH 254
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + +TP + + RWK L +E +P + S AL YD V ++
Sbjct: 255 GGANVT-GFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 308
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A +L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 309 AETFRSLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNV 361
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
+FD VN DV + TG R++GYW++ L ++
Sbjct: 362 QFDHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLI 399
Score = 38 (18.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 55 SDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+D Y+ + V +++ ++ G + IAI D YG
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYG 473
Score = 37 (18.1 bits), Expect = 7.5e-17, Sum P(3) = 7.5e-17
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVD--FTQPYM 470
+ND+ + V + D + NRT +V PY+
Sbjct: 390 WNDMDKLVLIQDMPTLGNDTAAIENRTVVVTTIMESPYV 428
>UNIPROTKB|P19493 [details] [associations]
symbol:Gria4 "Glutamate receptor 4" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:61863 GO:GO:0014069 GO:GO:0060992
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0050803
GO:GO:0043195 GO:GO:0051968 GO:GO:0032281 InterPro:IPR001828
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 HOGENOM:HOG000234372
HOVERGEN:HBG051839 GO:GO:0015277 CTD:2893 KO:K05200
OrthoDB:EOG4DBTD0 GO:GO:0032983 EMBL:M36421 EMBL:M85037 EMBL:M38063
EMBL:S94371 IPI:IPI00195445 IPI:IPI00231131 IPI:IPI00231132
PIR:A44839 PIR:D40170 RefSeq:NP_001106655.1 RefSeq:NP_058959.2
UniGene:Rn.10938 PDB:3EN3 PDB:3EPE PDB:3FAS PDB:3FAT PDB:3KEI
PDB:3KFM PDB:4GPA PDBsum:3EN3 PDBsum:3EPE PDBsum:3FAS PDBsum:3FAT
PDBsum:3KEI PDBsum:3KFM PDBsum:4GPA ProteinModelPortal:P19493
SMR:P19493 DIP:DIP-41142N MINT:MINT-86166 STRING:P19493
TCDB:1.A.10.1.2 PhosphoSite:P19493 PRIDE:P19493 GeneID:29629
KEGG:rno:29629 UCSC:RGD:61863 InParanoid:P19493 BindingDB:P19493
ChEMBL:CHEMBL3505 EvolutionaryTrace:P19493 NextBio:609852
ArrayExpress:P19493 Genevestigator:P19493
GermOnline:ENSRNOG00000006957 Uniprot:P19493
Length = 902
Score = 183 (69.5 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 400 KGYCIDVF-EAAVNL-LPYP---VPHNYIMYG-NGKRNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y VP YG I+N +V ++ K + A+ +
Sbjct: 444 EGYCVDLASEIAKHIGIKYKIAIVPDG--KYGARDADTKIWNGMVGELVYGKAEIAIAPL 501
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 502 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 559
Query: 512 VVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFSTMFFSHRENTVSSL- 555
VV L RF+ E+ GP Q + WFS + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 666
Score = 183 (69.5 bits), Expect = 7.5e-17, Sum P(3) = 7.5e-17
Identities = 70/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +++ E
Sbjct: 649 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTT 708
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 709 AEGVARVRKSKGKFAFLLESTMNEYTEQRKPCDTMKVGGNLDSKGYGVATPKGSSLGNAV 768
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 769 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 828
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 829 MLVALIEF 836
Score = 123 (48.4 bits), Expect = 9.0e-18, Sum P(2) = 9.0e-18
Identities = 65/278 (23%), Positives = 116/278 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + + A + +
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTD---RGYSIL-QAIMEKAGQNGWHVSAICVENFNDVSYR 195
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + I S+G Y +I + L S E
Sbjct: 196 QLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIAN-LGFKDISLERFIH 254
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + +TP + + RWK L +E +P + S AL YD V ++
Sbjct: 255 GGANVT-GFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 308
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A +L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 309 AETFRSLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNV 361
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
+FD VN DV + TG R++GYW++ L ++
Sbjct: 362 QFDHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLI 399
Score = 38 (18.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 55 SDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+D Y+ + V +++ ++ G + IAI D YG
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYG 473
Score = 37 (18.1 bits), Expect = 7.5e-17, Sum P(3) = 7.5e-17
Identities = 10/39 (25%), Positives = 17/39 (43%)
Query: 434 YNDIVQQVALNKFDAAVGDITIVTNRTKLVD--FTQPYM 470
+ND+ + V + D + NRT +V PY+
Sbjct: 390 WNDMDKLVLIQDMPTLGNDTAAIENRTVVVTTIMESPYV 428
>UNIPROTKB|F1RL86 [details] [associations]
symbol:GRIN2D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0008344
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964
GO:GO:0005234 GO:GO:0004972 GeneTree:ENSGT00540000070221
OMA:ARCGCPR EMBL:FP102301 Ensembl:ENSSSCT00000003474 Uniprot:F1RL86
Length = 1328
Score = 187 (70.9 bits), Expect = 9.0e-18, Sum P(3) = 9.0e-18
Identities = 84/336 (25%), Positives = 147/336 (43%)
Query: 286 MNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNS 345
MN T + + F+ D LVNP+ V+++ T R W + Y P S
Sbjct: 365 MNITWDNRDYSFNEDGFLVNPSLVVISL--TRDRT---WEVVGSWEQQTLRLKY--PLWS 417
Query: 346 SSNRHLYSVIWPGEIT-AT--PRGWVF-----PNNGMPLRIAVPNRVSYNEFVAKDKSPP 397
R L V +T AT R +V P +G +R +VP R N + P
Sbjct: 418 RYGRFLQPVDDTQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSPPPDAP 477
Query: 398 G-----VKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAV 450
KG+CID+ + + + + G +GK+ + ++N ++ +V + D A+
Sbjct: 478 RPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAI 537
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
G +TI R+++VDF+ P++E+G+ V+ SP AFL+P++ +W++ L V
Sbjct: 538 GSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVV 597
Query: 511 AV-VWILEHR----FNNEFR-GP-PSQQLVTI---FWFSFSTMFFSHR--ENTVSSLGRX 558
AV V+I E+ +N G P TI W ++ +F + EN + +
Sbjct: 598 AVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKI 657
Query: 559 XXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ + G+
Sbjct: 658 MVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGL 693
Score = 95 (38.5 bits), Expect = 9.0e-18, Sum P(3) = 9.0e-18
Identities = 45/199 (22%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISSTE----PI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ + G+ D + P+ G V +GS N +
Sbjct: 671 ASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGSTEKN-IRSNYPDM 729
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
S +V+ N AL + K G + A + + + K C+ T+G + F +
Sbjct: 730 HSYMVRY-NQPRVEEALTQ-LKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATT 787
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A + S + A+LQ + +++ + WL+ C D + S+L + +
Sbjct: 788 GYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLS-GICHND--KIEVMSSKLDIDN 844
Query: 741 FWGLFLICGIACFLALIFF 759
G+F + +A L+L+ F
Sbjct: 845 MAGVFYMLLVAMGLSLLVF 863
Score = 76 (31.8 bits), Expect = 9.0e-18, Sum P(3) = 9.0e-18
Identities = 27/154 (17%), Positives = 62/154 (40%)
Query: 12 QSSGIAHVISHVVNELNVPLLSF-GATDPTLTSLQY-PYFLRTTQSDYYQMHAVADLVEY 69
++ +A ++ + + ++P+++ G LT + FL+ S Q+ + +++E
Sbjct: 122 RAPAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQLGSSTEQQLQVIFEVLEE 181
Query: 70 YGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFS--PGASRSAINSLLVGANL 127
Y W +A+ R +S + ++ + PGA + + + L +
Sbjct: 182 YDWTSFVAVTTRAPGHRAFLSYIEVLTDGSLVGWEHRGALTLDPGAGEAVLGAQLRSVSA 241
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVW 161
+F + +F A+ G+T YVW
Sbjct: 242 QIRLLFCAREEAEP---VFRAAEEAGLTGPGYVW 272
>ZFIN|ZDB-GENE-070424-129 [details] [associations]
symbol:grin2aa "glutamate receptor, ionotropic,
N-methyl D-aspartate 2A, a" species:7955 "Danio rerio" [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070424-129
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 eggNOG:NOG282132 HOVERGEN:HBG052635 OrthoDB:EOG4X0MRG
InterPro:IPR018884 Pfam:PF10565 GeneTree:ENSGT00540000070221
HOGENOM:HOG000113802 EMBL:CR954963 EMBL:BX908803 IPI:IPI00494319
Ensembl:ENSDART00000073979 Ensembl:ENSDART00000142141
Uniprot:F1QZC7
Length = 1460
Score = 183 (69.5 bits), Expect = 1.2e-17, Sum P(5) = 1.2e-17
Identities = 53/209 (25%), Positives = 101/209 (48%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAVGDITIVT 457
KG+CID+ + + + + G +GK+ N ++N +V +V K AVG +TI
Sbjct: 454 KGFCIDILKKIARNVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVNKKAVMAVGSLTINE 513
Query: 458 NRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWIL 516
R++++DF+ P++E+G+ V+ SP AFL+PF+ +W++ L V A+ V++
Sbjct: 514 ERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVTAMAVFMF 573
Query: 517 EH----RFNNEF---RGP--PSQQLVTIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXX 565
E+ FN + P PS + W + +F + +N + +
Sbjct: 574 EYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFIVSVWAF 633
Query: 566 XXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ Q+ G+
Sbjct: 634 FAVIFLASYTANLAAFMIQEEFVDQVTGL 662
Score = 102 (41.0 bits), Expect = 1.2e-17, Sum P(5) = 1.2e-17
Identities = 48/199 (24%), Positives = 89/199 (44%)
Query: 572 SSYTASLTSILTVQQLTSQIEGID-----SLISSTEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ S S + P G V +GS N +
Sbjct: 640 ASYTANLAAFMIQEEFVDQVTGLSDKKFQSPYSYSPPFRFGTVPNGSTERN-IRKNYPDM 698
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE--FTKS 680
+VK + + AL K G + A + + + + C+ T+G F +
Sbjct: 699 HQYMVKY-HQTGVNDALV-SLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATT 756
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A Q+ S + AIL + +G+++++ +WLT C + + S+L + +
Sbjct: 757 GYGIALQKGSLWKRPVDLAILAIIGDGEMEELEAQWLT-GICHNEKNEVMS--SQLDVDN 813
Query: 741 FWGLFLICGIACFLALIFF 759
G+F + A L+LI F
Sbjct: 814 MAGVFYMLATAMGLSLITF 832
Score = 77 (32.2 bits), Expect = 1.2e-17, Sum P(5) = 1.2e-17
Identities = 38/200 (19%), Positives = 81/200 (40%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSF-GATDPTLTSLQYPY-FLRTTQSDYYQMHA 62
VV G IA ++ + ++ +P+L G + + F + S +
Sbjct: 95 VVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGASIQQEALL 154
Query: 63 VADLVEYYGWREVIAIFVDDDYG-RNGISVLGDALSKKRAKISYKAPFSPGASRSAINSL 121
+ +++E Y W V +I G ++ I++L + + + A +
Sbjct: 155 MLNIMEEYDWH-VFSIVTSKFPGYQDFIAILKTTVDNSFVGWDLQHIITLDAV-DGDSRT 212
Query: 122 LVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ ++S V +++ + D I A+SLG+T Y+WI +PS+ + DT
Sbjct: 213 QIQLKKVQSPVVLLYCSKDEAAYILEEARSLGLTGFGYIWI----VPSLTTGNPEITPDT 268
Query: 182 MNLLQGVVALRHHTPDTDLK 201
G++++ + D L+
Sbjct: 269 FP--SGMISVSYDDWDYPLE 286
Score = 46 (21.3 bits), Expect = 1.2e-17, Sum P(5) = 1.2e-17
Identities = 11/33 (33%), Positives = 21/33 (63%)
Query: 340 TKPPNSSSNRHLYSVIWPG-EITATPRGW-VFP 370
TK P S+ ++++ +V W G +++ T G+ V P
Sbjct: 324 TKLPPSALHKYMMNVTWDGKDLSFTEDGYQVHP 356
Score = 37 (18.1 bits), Expect = 1.2e-17, Sum P(5) = 1.2e-17
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 808 DRKEAEIKEILKRRNSDNKRPSQSSD 833
+ K + K+ LK+R+ +K P S+
Sbjct: 1063 NNKHLKPKDNLKKRSMTSKYPRDCSE 1088
>UNIPROTKB|G3N1N5 [details] [associations]
symbol:100335496 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:DAAA02039769 EMBL:DAAA02039770
Ensembl:ENSBTAT00000063398 Uniprot:G3N1N5
Length = 660
Score = 184 (69.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 70/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 347 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 406
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +++ E
Sbjct: 407 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTT 466
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 467 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRNAV 526
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 527 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 586
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 587 MLVALIEF 594
Score = 183 (69.5 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 400 KGYCIDVF-EAAVNL-LPYP---VPHNYIMYG-NGKRNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y VP YG I+N +V ++ K + A+ +
Sbjct: 202 EGYCVDLASEIAKHIGIKYKIAIVPDG--KYGARDADTKIWNGMVGELVYGKAEIAIAPL 259
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 260 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 317
Query: 512 VVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFSTMFFSHRENTVSSL- 555
VV L RF+ E+ GP Q + WFS + + SL
Sbjct: 318 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 377
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 378 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 424
Score = 117 (46.2 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 38/141 (26%), Positives = 65/141 (46%)
Query: 197 DTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLVAHALDALLNEGGKFTFS 252
+T + + RWK L +E +P + S AL YD V ++A +L + K S
Sbjct: 26 NTPMVTKLMDRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVMAETFRSLRRQ--KIDIS 81
Query: 253 NDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLN 312
D + N ++ + G +TL ++ GL+G ++FD VN DV
Sbjct: 82 RRGNAGDC---LANPAA--PWGQGIDMERTLKQVQIQGLTGNVQFDHYGRRVNYTMDVFE 136
Query: 313 IGGTGSRRIGYWSNYSGLSVV 333
+ TG R++GYW++ L ++
Sbjct: 137 LKSTGPRKVGYWNDMDKLVLI 157
Score = 38 (18.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 55 SDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+D Y+ + V +++ ++ G + IAI D YG
Sbjct: 198 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYG 231
>UNIPROTKB|I3L8N9 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:RIGYWND EMBL:AEMK01190335 EMBL:CU855529
EMBL:CU972413 EMBL:FP312660 Ensembl:ENSSSCT00000027751
Uniprot:I3L8N9
Length = 883
Score = 184 (69.8 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 70/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 570 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 629
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +++ E
Sbjct: 630 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTT 689
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 690 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRNAV 749
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 750 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 809
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 810 MLVALIEF 817
Score = 183 (69.5 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 400 KGYCIDVF-EAAVNL-LPYP---VPHNYIMYG-NGKRNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y VP YG I+N +V ++ K + A+ +
Sbjct: 425 EGYCVDLASEIAKHIGIKYKIAIVPDG--KYGARDADTKIWNGMVGELVYGKAEIAIAPL 482
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 483 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 540
Query: 512 VVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFSTMFFSHRENTVSSL- 555
VV L RF+ E+ GP Q + WFS + + SL
Sbjct: 541 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 600
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 601 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 647
Score = 120 (47.3 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 65/278 (23%), Positives = 115/278 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + + A + +
Sbjct: 122 ALLSLLDHYEWNCFVFLY-DTD---RGYSIL-QAIMEKAGQNGWHVSAICVENFNDVSYR 176
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + I S+G Y +I + L S E
Sbjct: 177 QLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIAN-LGFKDISLERFIH 235
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + +TP + + RWK L +E +P + S AL YD V ++
Sbjct: 236 GGANVT-GFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 289
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 290 AETFRNLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVQIQGLTGNV 342
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
+FD VN DV + TG R++GYW++ L ++
Sbjct: 343 QFDHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLI 380
Score = 38 (18.4 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 55 SDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+D Y+ + V +++ ++ G + IAI D YG
Sbjct: 421 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYG 454
>UNIPROTKB|Q38PU5 [details] [associations]
symbol:GRIA4 "Glutamate receptor 4" species:9541 "Macaca
fascicularis" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=ISS] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 GO:GO:0015277 HSSP:P19491
GO:GO:0032983 EMBL:DQ159932 ProteinModelPortal:Q38PU5 SMR:Q38PU5
Uniprot:Q38PU5
Length = 902
Score = 183 (69.5 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 400 KGYCIDVF-EAAVNL-LPYP---VPHNYIMYG-NGKRNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y VP YG I+N +V ++ K + A+ +
Sbjct: 444 EGYCVDLASEIAKHIGIKYKIAIVPDG--KYGARDADTKIWNGMVGELVYGKAEIAIAPL 501
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 502 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 559
Query: 512 VVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFSTMFFSHRENTVSSL- 555
VV L RF+ E+ GP Q + WFS + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 666
Score = 183 (69.5 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 70/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +++ E
Sbjct: 649 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTT 708
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 709 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLGNAV 768
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 769 NLAVLKLNEPGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 828
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 829 MLVALIEF 836
Score = 121 (47.7 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 66/278 (23%), Positives = 117/278 (42%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + + A + +
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTD---RGYSIL-QAIMEKAGQNGWHVSAICVENFNDVSYR 195
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + I S+G Y +I + L S E
Sbjct: 196 QLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIAN-LGFKDISLERFIH 254
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + +TP +K + RWK L +E +P + S AL YD V ++
Sbjct: 255 GGANVT-GFQLVDFNTPMV-IK--LMDRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 308
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A +L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 309 AETFRSLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNV 361
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
+FD VN DV + TG R++GYW++ L ++
Sbjct: 362 QFDHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLI 399
Score = 38 (18.4 bits), Expect = 5.8e-09, Sum P(2) = 5.8e-09
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 55 SDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+D Y+ + V +++ ++ G + IAI D YG
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYG 473
>UNIPROTKB|E2RIZ6 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 OMA:RIGYWND EMBL:AAEX03003527 EMBL:AAEX03003528
Ensembl:ENSCAFT00000023560 Uniprot:E2RIZ6
Length = 854
Score = 183 (69.5 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 400 KGYCIDVF-EAAVNL-LPYP---VPHNYIMYG-NGKRNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y VP YG I+N +V ++ K + A+ +
Sbjct: 444 EGYCVDLASEIAKHIGIKYKIAIVPDG--KYGARDADTKIWNGMVGELVYGKAEIAIAPL 501
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 502 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 559
Query: 512 VVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFSTMFFSHRENTVSSL- 555
VV L RF+ E+ GP Q + WFS + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 666
Score = 171 (65.3 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 64/225 (28%), Positives = 96/225 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +++ E
Sbjct: 649 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTT 708
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 709 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRTPV 768
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKS 740
+ A+L+LSE G L K+ NKW EC P D G S++S +S
Sbjct: 769 NLAVLKLSEAGVLDKLKNKWWYDKGECG----PKDSG-SKVSRRS 808
Score = 120 (47.3 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 65/278 (23%), Positives = 115/278 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + + A + +
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTD---RGYSIL-QAIMEKAGQHGWHVSAICVENFNDVSYR 195
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + I S+G Y +I + L S E
Sbjct: 196 QLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIAN-LGFKDISLERFIH 254
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + +TP + + RWK L +E +P + S AL YD V ++
Sbjct: 255 GGANVT-GFQLVDFNTP---MVTKLMDRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 308
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 309 AETFRNLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNV 361
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
+FD VN DV + TG R++GYW++ L ++
Sbjct: 362 QFDHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLI 399
Score = 42 (19.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 49 FLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDD 82
FL T Y + A+ + +GW V AI V++
Sbjct: 156 FLYDTDRGYSILQAIMEKAGQHGWH-VSAICVEN 188
Score = 38 (18.4 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 55 SDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+D Y+ + V +++ ++ G + IAI D YG
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYG 473
>UNIPROTKB|Q16099 [details] [associations]
symbol:GRIK4 "Glutamate receptor ionotropic, kainate 4"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=TAS] [GO:0006810 "transport" evidence=TAS] [GO:0007215
"glutamate receptor signaling pathway" evidence=TAS] [GO:0015277
"kainate selective glutamate receptor activity" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] Reactome:REACT_13685 InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005634 GO:GO:0005887 EMBL:CH471065 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0043204
GO:GO:0042734 GO:GO:0043195 DrugBank:DB00142 InterPro:IPR001828
GO:GO:0031960 eggNOG:NOG316680 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:S67803
EMBL:AK292726 IPI:IPI00292269 PIR:JH0826 RefSeq:NP_055434.2
UniGene:Hs.568901 ProteinModelPortal:Q16099 SMR:Q16099
STRING:Q16099 TCDB:1.A.10.1.9 PhosphoSite:Q16099 DMDM:209572625
PaxDb:Q16099 PRIDE:Q16099 Ensembl:ENST00000438375
Ensembl:ENST00000527524 GeneID:2900 KEGG:hsa:2900 UCSC:uc001pxn.2
CTD:2900 GeneCards:GC11P120480 H-InvDB:HIX0036043 HGNC:HGNC:4582
MIM:600282 neXtProt:NX_Q16099 PharmGKB:PA28976 InParanoid:Q16099
KO:K05204 OMA:NRAPERL PhylomeDB:Q16099 BindingDB:Q16099
ChEMBL:CHEMBL2829 GenomeRNAi:2900 NextBio:11479 Bgee:Q16099
CleanEx:HS_GRIK4 Genevestigator:Q16099 GermOnline:ENSG00000149403
Uniprot:Q16099
Length = 956
Score = 183 (69.5 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 72/300 (24%), Positives = 131/300 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+G+C+D+ + +L + + +YG + N + +V ++ K D AV +TI
Sbjct: 445 EGFCVDMLKELAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELIARKADLAVAGLTIT 504
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQK-LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ V K ++FL PF+ +WL +L V V+++
Sbjct: 505 AEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFL 564
Query: 516 LEHRFNNEFRGP-PSQQ-----LVTIFWFSFSTMF----FSHRENTVS--SLG-RXXXXX 562
+ E+ P P Q LV + S F F + +T++ +L R
Sbjct: 565 VARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGV 624
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELK 621
SSYTA+L + LTVQ++ IE +D L T G G + + +
Sbjct: 625 WWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRY 684
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSG 681
R+ ++ S+ + +G +A +++ Y L S N +R T+ G
Sbjct: 685 QTYQRMWNYMYSKQPSVFVKSTEEG--IARVLNS-NYAFLLESTMNEYYRQRNCNLTQIG 741
Score = 153 (58.9 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 53/200 (26%), Positives = 87/200 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ IE +D L T G G + + + R+
Sbjct: 634 SSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNY 693
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELPYIELFMS-------KTNCEFRTVGQEFTKSGWG 683
++ S+ + +G +A +++ Y L S + NC +G G+G
Sbjct: 694 MYSKQPSVFVKSTEEG--IARVLNS-NYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYG 750
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWG 743
S + AILQL EN L+ + KW +C + D L +++ G
Sbjct: 751 IGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE---EDHRAKGLGMENIGG 807
Query: 744 LF--LICG--IACFLALIFF 759
+F LICG +A F+A++ F
Sbjct: 808 IFVVLICGLIVAIFMAMLEF 827
Score = 121 (47.7 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 48/205 (23%), Positives = 85/205 (41%)
Query: 129 ESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGV 188
++ ++H N TI A LGM + Y +I T+ S+ VD D +N+L
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMDSLVD-DRVNILGFS 269
Query: 189 VALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALYAYDSVWLVAHALDALLNEGG 247
+ + H + ++ W+ N + + +S L+ D+V+ V A+ L
Sbjct: 270 IFNQSHAFFQEFAQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAVVTAVQEL----- 322
Query: 248 KFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPA 307
N + + L+ S +++ G + L + GL+G I F++ N A
Sbjct: 323 -----N--RSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYA 375
Query: 308 YDVLNIGGTGSRRIGYWSNYSGLSV 332
+L G R+IG W GLS+
Sbjct: 376 LKILQFTRNGFRQIGQWHVAEGLSM 400
Score = 87 (35.7 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 56/242 (23%), Positives = 95/242 (39%)
Query: 5 VVAAIGPQSS-GIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYF--LRTTQSDYYQMH 61
VVA +GP SS + +IS++ E VP F Q+ F L S+
Sbjct: 91 VVAVLGPSSSPASSSIISNICGEKEVP--HFKVAPEEFVKFQFQRFTTLNLHPSNTDISV 148
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSL 121
AVA ++ ++ I + N +L L K +S + +R L
Sbjct: 149 AVAGILNFFNCTTACLICAKAECLLNLEKLLRQFLISKDT-LSVRMLDD---TRDP-TPL 203
Query: 122 LVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
L ++ ++H N TI A LGM + Y +I T+ S+ VD D
Sbjct: 204 LKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMDSLVD-DR 262
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALYAYDSVWLVAHALD 240
+N+L + + H + ++ W+ N + + +S L+ D+V+ V A+
Sbjct: 263 VNILGFSIFNQSHAFFQEFAQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAVVTAVQ 320
Query: 241 AL 242
L
Sbjct: 321 EL 322
Score = 45 (20.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 88 GISVLGDA-LSKKRAKISYKAPFSPG 112
GIS+L + +K S+ PFSPG
Sbjct: 521 GISILYRVHMGRKPGYFSFLDPFSPG 546
>UNIPROTKB|F1PHA8 [details] [associations]
symbol:GRIK4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2900 KO:K05204 OMA:NRAPERL EMBL:AAEX03003415
EMBL:AAEX03003416 EMBL:AAEX03003417 EMBL:AAEX03003418
EMBL:AAEX03003419 RefSeq:XP_853030.3 Ensembl:ENSCAFT00000018877
GeneID:610429 KEGG:cfa:610429 Uniprot:F1PHA8
Length = 956
Score = 183 (69.5 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 72/300 (24%), Positives = 131/300 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+G+C+D+ + +L + + +YG + N + +V ++ K D AV +TI
Sbjct: 445 EGFCVDMLKELAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELIARKADLAVAGLTIT 504
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQK-LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ V K ++FL PF+ +WL +L V V+++
Sbjct: 505 AEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFL 564
Query: 516 LEHRFNNEFRGP-PSQQ-----LVTIFWFSFSTMF----FSHRENTVS--SLG-RXXXXX 562
+ E+ P P Q LV + S F F + +T++ +L R
Sbjct: 565 VARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGV 624
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELK 621
SSYTA+L + LTVQ++ IE +D L T G G + + +
Sbjct: 625 WWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRY 684
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSG 681
R+ ++ S+ + +G +A +++ Y L S N +R T+ G
Sbjct: 685 QTYQRMWNYMYSKQPSVFVKSTEEG--IARVLNS-NYAFLLESTMNEYYRQRNCNLTQIG 741
Score = 153 (58.9 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 53/200 (26%), Positives = 87/200 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ IE +D L T G G + + + R+
Sbjct: 634 SSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNY 693
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELPYIELFMS-------KTNCEFRTVGQEFTKSGWG 683
++ S+ + +G +A +++ Y L S + NC +G G+G
Sbjct: 694 MYSKQPSVFVKSTEEG--IARVLNS-NYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYG 750
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWG 743
S + AILQL EN L+ + KW +C + D L +++ G
Sbjct: 751 IGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE---EDHRAKGLGMENIGG 807
Query: 744 LF--LICG--IACFLALIFF 759
+F LICG +A F+A++ F
Sbjct: 808 IFVVLICGLIVAIFMAMLEF 827
Score = 121 (47.7 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 48/205 (23%), Positives = 85/205 (41%)
Query: 129 ESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGV 188
++ ++H N TI A LGM + Y +I T+ S+ VD D +N+L
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMDSLVD-DRVNILGFS 269
Query: 189 VALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALYAYDSVWLVAHALDALLNEGG 247
+ + H + ++ W+ N + + +S L+ D+V+ V A+ L
Sbjct: 270 IFNQSHAFFQEFAQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAVVTAVQEL----- 322
Query: 248 KFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPA 307
N + + L+ S +++ G + L + GL+G I F++ N A
Sbjct: 323 -----N--RSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYA 375
Query: 308 YDVLNIGGTGSRRIGYWSNYSGLSV 332
+L G R+IG W GLS+
Sbjct: 376 LKILQFTRNGFRQIGQWHVADGLSM 400
Score = 86 (35.3 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 56/242 (23%), Positives = 95/242 (39%)
Query: 5 VVAAIGPQSS-GIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYF--LRTTQSDYYQMH 61
VVA +GP SS + +IS++ E VP F Q+ F L S+
Sbjct: 91 VVAVLGPSSSPASSSIISNICGEKEVP--HFKVAPEEFIKFQFQRFTTLNLHPSNTDISV 148
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSL 121
AVA ++ ++ I + N +L L K +S + +R L
Sbjct: 149 AVAGILNFFNCTTACLICAKAECLLNLEKLLRQFLISKDT-LSVRMLDD---TRDP-TPL 203
Query: 122 LVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
L ++ ++H N TI A LGM + Y +I T+ S+ VD D
Sbjct: 204 LKEIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMDSLVD-DR 262
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALYAYDSVWLVAHALD 240
+N+L + + H + ++ W+ N + + +S L+ D+V+ V A+
Sbjct: 263 VNILGFSIFNQSHAFFQEFAQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAVVTAVQ 320
Query: 241 AL 242
L
Sbjct: 321 EL 322
Score = 45 (20.9 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 88 GISVLGDA-LSKKRAKISYKAPFSPG 112
GIS+L + +K S+ PFSPG
Sbjct: 521 GISILYRVHMGRKPGYFSFLDPFSPG 546
>UNIPROTKB|A9Z1Z8 [details] [associations]
symbol:GRIK3 "Glutamate receptor, ionotropic, kainate 3,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CH471059 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371
HOVERGEN:HBG051839 HSSP:P19491 EMBL:AL355386 EMBL:AC117945
RefSeq:NP_000822.2 UniGene:Hs.128848 DNASU:2899 GeneID:2899
KEGG:hsa:2899 CTD:2899 HGNC:HGNC:4581 PharmGKB:PA28975 KO:K05203
GenomeRNAi:2899 NextBio:11475 EMBL:AL591883 EMBL:AJ249210
IPI:IPI00646850 SMR:A9Z1Z8 STRING:A9Z1Z8 Ensembl:ENST00000373093
UCSC:uc001cba.1 Uniprot:A9Z1Z8
Length = 872
Score = 176 (67.0 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 62/230 (26%), Positives = 110/230 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+GYCID+ + ++L + + YG +N +V+++ +K D AV +TI
Sbjct: 463 EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTIT 522
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K +DF++P+M G+ ++ S ++FL P + +W+ +L V V+++
Sbjct: 523 HVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582
Query: 516 LEHRFNN-EFRG--P--PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXX 562
+ RF+ E+ P P ++V T+ FWF ++ E +L R
Sbjct: 583 IA-RFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGA 691
Score = 152 (58.6 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 66/289 (22%), Positives = 121/289 (41%)
Query: 486 SPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRG--P--PSQQLV----TI-- 535
S ++FL P + +W+ +L V V++++ E+ P P ++V T+
Sbjct: 553 SVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLN 612
Query: 536 -FWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
FWF ++ E +L R SSYTA+L + LTV+++ S I+
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 594 IDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIAL-ARGPKGGGVA 650
D L T+ G V+DG+ + ++ E + + + G + A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTA 732
Query: 651 --AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGD 708
A++ E IE ++++ NC +G G+G SP ++ AILQL E
Sbjct: 733 DYALLMESTTIE-YVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 791
Query: 709 LQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALI 757
L + KW + C + + S L ++ G+F++ L+++
Sbjct: 792 LHIMKEKWWRGSGCPEEENKE---ASALGIQKIGGIFIVLAAGLVLSVL 837
Score = 126 (49.4 bits), Expect = 2.3e-17, Sum P(2) = 2.3e-17
Identities = 76/334 (22%), Positives = 121/334 (36%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VVA GP + + + N L VP + L + Y DY + HA+
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYV--NLYPDYASLSHAI 163
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINSLL 122
DLV+Y WR ++ DD G + L A S+ ++ + P SR + +
Sbjct: 164 LDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMK 222
Query: 123 VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTM 182
G E R+ + + I A ++GM Y +I T LD EP +
Sbjct: 223 RGR---EFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALD-LEPYRYSGV 277
Query: 183 NLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGFNSYALYAYDSVWL--VAHA 238
NL G L P + +W + L+ S SG + D+ L H
Sbjct: 278 NLT-GFRILNVDNPHVSA---IVEKWSMERLQAAPRSESGLLDGVMMT-DAALLYDAVHI 332
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFD 298
+ + T N + H + F Q+ R+ F SG +R D
Sbjct: 333 VSVCYQRAPQMTV-NSLQCHRHKAWRFGGRFMN-FIKEAQWEGLTGRIVFNKTSG-LRTD 389
Query: 299 ADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D++++ G ++G WS GL++
Sbjct: 390 FD-------LDIISLKEDGLEKVGVWSPADGLNI 416
>UNIPROTKB|Q13003 [details] [associations]
symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0008066 "glutamate receptor activity"
evidence=TAS] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0007215 "glutamate receptor signaling
pathway" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0042391 "regulation of membrane potential"
evidence=ISS;IDA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISS;IDA] [GO:0030424 "axon" evidence=ISS]
[GO:0032839 "dendrite cytoplasm" evidence=ISS] [GO:0043195
"terminal bouton" evidence=ISS] [GO:0043204 "perikaryon"
evidence=ISS] [GO:0007216 "G-protein coupled glutamate receptor
signaling pathway" evidence=IDA] [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0007196
"adenylate cyclase-inhibiting G-protein coupled glutamate receptor
signaling pathway" evidence=IDA] [GO:0035235 "ionotropic glutamate
receptor signaling pathway" evidence=ISS;IDA] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0005887 EMBL:CH471059
GO:GO:0051967 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0043195 DrugBank:DB00142 GO:GO:0042391
GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
OrthoDB:EOG41C6VH EMBL:U16127 EMBL:U16128 EMBL:AL355386
EMBL:AC117945 EMBL:S69349 IPI:IPI00011397 PIR:I59604
RefSeq:NP_000822.2 UniGene:Hs.128848 ProteinModelPortal:Q13003
SMR:Q13003 STRING:Q13003 PhosphoSite:Q13003 DMDM:212276502
PaxDb:Q13003 PRIDE:Q13003 DNASU:2899 Ensembl:ENST00000373091
GeneID:2899 KEGG:hsa:2899 UCSC:uc001caz.2 CTD:2899
GeneCards:GC01M037261 H-InvDB:HIX0028621 HGNC:HGNC:4581
HPA:HPA014709 MIM:138243 neXtProt:NX_Q13003 PharmGKB:PA28975
InParanoid:Q13003 KO:K05203 OMA:EEQAFRF PhylomeDB:Q13003
BindingDB:Q13003 ChEMBL:CHEMBL3684 GenomeRNAi:2899 NextBio:11475
ArrayExpress:Q13003 Bgee:Q13003 CleanEx:HS_GRIK3
Genevestigator:Q13003 GermOnline:ENSG00000163873 GO:GO:0001640
Uniprot:Q13003
Length = 919
Score = 176 (67.0 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 62/230 (26%), Positives = 110/230 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+GYCID+ + ++L + + YG +N +V+++ +K D AV +TI
Sbjct: 463 EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTIT 522
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K +DF++P+M G+ ++ S ++FL P + +W+ +L V V+++
Sbjct: 523 HVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582
Query: 516 LEHRFNN-EFRG--P--PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXX 562
+ RF+ E+ P P ++V T+ FWF ++ E +L R
Sbjct: 583 IA-RFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGA 691
Score = 152 (58.6 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 66/289 (22%), Positives = 121/289 (41%)
Query: 486 SPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRG--P--PSQQLV----TI-- 535
S ++FL P + +W+ +L V V++++ E+ P P ++V T+
Sbjct: 553 SVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLN 612
Query: 536 -FWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
FWF ++ E +L R SSYTA+L + LTV+++ S I+
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 594 IDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIAL-ARGPKGGGVA 650
D L T+ G V+DG+ + ++ E + + + G + A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTA 732
Query: 651 --AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGD 708
A++ E IE ++++ NC +G G+G SP ++ AILQL E
Sbjct: 733 DYALLMESTTIE-YVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 791
Query: 709 LQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALI 757
L + KW + C + + S L ++ G+F++ L+++
Sbjct: 792 LHIMKEKWWRGSGCPEEENKE---ASALGIQKIGGIFIVLAAGLVLSVL 837
Score = 126 (49.4 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 76/334 (22%), Positives = 121/334 (36%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VVA GP + + + N L VP + L + Y DY + HA+
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYV--NLYPDYASLSHAI 163
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINSLL 122
DLV+Y WR ++ DD G + L A S+ ++ + P SR + +
Sbjct: 164 LDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMK 222
Query: 123 VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTM 182
G E R+ + + I A ++GM Y +I T LD EP +
Sbjct: 223 RGR---EFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALD-LEPYRYSGV 277
Query: 183 NLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGFNSYALYAYDSVWL--VAHA 238
NL G L P + +W + L+ S SG + D+ L H
Sbjct: 278 NLT-GFRILNVDNPHVSA---IVEKWSMERLQAAPRSESGLLDGVMMT-DAALLYDAVHI 332
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFD 298
+ + T N + H + F Q+ R+ F SG +R D
Sbjct: 333 VSVCYQRAPQMTV-NSLQCHRHKAWRFGGRFMN-FIKEAQWEGLTGRIVFNKTSG-LRTD 389
Query: 299 ADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D++++ G ++G WS GL++
Sbjct: 390 FD-------LDIISLKEDGLEKVGVWSPADGLNI 416
>UNIPROTKB|F1PG03 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0032281
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 EMBL:AAEX03003527 EMBL:AAEX03003528
Ensembl:ENSCAFT00000023554 Uniprot:F1PG03
Length = 740
Score = 184 (69.8 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 70/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 427 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 486
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +++ E
Sbjct: 487 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTT 546
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 547 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRNAV 606
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 607 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 666
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 667 MLVALIEF 674
Score = 183 (69.5 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 400 KGYCIDVF-EAAVNL-LPYP---VPHNYIMYG-NGKRNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y VP YG I+N +V ++ K + A+ +
Sbjct: 282 EGYCVDLASEIAKHIGIKYKIAIVPDG--KYGARDADTKIWNGMVGELVYGKAEIAIAPL 339
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 340 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 397
Query: 512 VVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFSTMFFSHRENTVSSL- 555
VV L RF+ E+ GP Q + WFS + + SL
Sbjct: 398 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 457
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 458 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 504
Score = 114 (45.2 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 38/141 (26%), Positives = 64/141 (45%)
Query: 197 DTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLVAHALDALLNEGGKFTFS 252
+T + + RWK L +E +P + S AL YD V ++A L + K S
Sbjct: 106 NTPMVTKLMDRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVMAETFRNLRRQ--KIDIS 161
Query: 253 NDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLN 312
D + N ++ + G +TL ++ GL+G ++FD VN DV
Sbjct: 162 RRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNVQFDHYGRRVNYTMDVFE 216
Query: 313 IGGTGSRRIGYWSNYSGLSVV 333
+ TG R++GYW++ L ++
Sbjct: 217 LKSTGPRKVGYWNDMDKLVLI 237
Score = 38 (18.4 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 55 SDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+D Y+ + V +++ ++ G + IAI D YG
Sbjct: 278 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYG 311
>UNIPROTKB|F1P5Y1 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007616 "long-term memory"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0032590 "dendrite
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0014069
GO:GO:0009986 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0032281 GO:GO:0031623 GO:GO:0032590
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 OMA:ARIMQQW EMBL:AADN02028659 EMBL:AADN02028660
IPI:IPI00820450 ProteinModelPortal:F1P5Y1
Ensembl:ENSGALT00000040661 Uniprot:F1P5Y1
Length = 904
Score = 191 (72.3 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 62/225 (27%), Positives = 102/225 (45%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVALNKFDAAVGDITI 455
+GYC+++ + Y + G G R+P +N +V ++ + D AV +TI
Sbjct: 438 EGYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNGMVGELVYGRADVAVAPLTI 497
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-AVV 513
R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +VV
Sbjct: 498 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVSVV 555
Query: 514 WILEHRFN------NEF---RGPPSQQLVTIF------WFSFSTMFFSHRENTVSSL-GR 557
L RF+ EF R P+ F WFS + + SL GR
Sbjct: 556 LFLVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGR 615
Query: 558 XXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
SSYTA+L + LTV+++ S IE + L TE
Sbjct: 616 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 660
Score = 177 (67.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 68/237 (28%), Positives = 101/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 594 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 653
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 654 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 713
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+LSE G
Sbjct: 714 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQG 773
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ +KW EC S + S LSL + G+F I G+A +ALI F
Sbjct: 774 VLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEF 830
Score = 109 (43.4 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 73/318 (22%), Positives = 126/318 (39%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P TS Q+ LR D A+ ++E+Y W++ + I+ D D G + + + D ++
Sbjct: 114 PVETSNQFVLQLRPELQD-----ALISVIEHYSWQKFVYIY-DADRGLSVLQKVLDTAAE 167
Query: 99 KRAKISYKAPFSPGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGS 158
K +++ + + L + R+ VV + I S L
Sbjct: 168 KNWQVTAVNILT--TTEEGYRVLFQELQKKKERLVVVDCESERLNIILSKIIKLEKNGNG 225
Query: 159 YVWIATDWLPSVLDSTEPVDIDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE--- 215
Y +I + +D T+ + N+ G L ++T DT + + +W+N +E
Sbjct: 226 YHYILANMGFMDIDLTKFRESGA-NVT-GF-QLVNYT-DT-VPARIMQQWRNNDARELPR 280
Query: 216 ---NSPSGFNSYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRV 272
P + AL YD V ++A A L + + S D L++ V
Sbjct: 281 VDWKRPKATYTSAL-TYDGVRVMAEAFQNLRRQ--RIDISRRGNAGDC------LANPAV 331
Query: 273 FDG-GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLS 331
G G + L ++ F GLSG ++F+ N V+ + G R+IGYW+ L
Sbjct: 332 PWGQGIDIQRALQQVRFEGLSGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYWNEDEKLV 391
Query: 332 VVAPEILYTKPPNSSSNR 349
VA + S NR
Sbjct: 392 PVAIDTQTGNESTSLQNR 409
>UNIPROTKB|F1MCM2 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0001640 "adenylate cyclase inhibiting
G-protein coupled glutamate receptor activity" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GeneTree:ENSGT00590000083056
OMA:EEQAFRF GO:GO:0001640 EMBL:DAAA02009187 IPI:IPI00709026
Ensembl:ENSBTAT00000012214 Uniprot:F1MCM2
Length = 881
Score = 175 (66.7 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 61/230 (26%), Positives = 110/230 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+GYCID+ + ++L + + YG +N +++++ +K D AV +TI
Sbjct: 425 EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAPLTIT 484
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K +DF++P+M G+ ++ S ++FL P + +W+ +L V V+++
Sbjct: 485 HVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 544
Query: 516 LEHRFNN-EFRG--P--PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXX 562
+ RF+ E+ P P ++V T+ FWF ++ E +L R
Sbjct: 545 IA-RFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 603
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 604 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGA 653
Score = 152 (58.6 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 67/292 (22%), Positives = 122/292 (41%)
Query: 486 SPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRG--P--PSQQLV----TI-- 535
S ++FL P + +W+ +L V V++++ E+ P P ++V T+
Sbjct: 515 SVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLN 574
Query: 536 -FWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
FWF ++ E +L R SSYTA+L + LTV+++ S I+
Sbjct: 575 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 634
Query: 594 IDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG---- 647
D L T+ G V+DG+ + ++ E + + AL + + G
Sbjct: 635 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPS---ALVKNNEEGIQRT 691
Query: 648 --GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSE 705
A++ E IE ++++ NC +G G+G SP ++ AILQL E
Sbjct: 692 LTADYALLMESTTIE-YVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQE 750
Query: 706 NGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALI 757
L + KW + C + + S L ++ G+F++ L+++
Sbjct: 751 EDKLHIMKEKWWRGSGCPEEENKE---ASALGIQKIGGIFIVLAAGLVLSVL 799
Score = 123 (48.4 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 75/334 (22%), Positives = 121/334 (36%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VVA GP + + + N L VP + L + Y DY + HA+
Sbjct: 68 VVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYV--NLYPDYASLSHAI 125
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINSLL 122
DLV+Y WR ++ DD G + L A S+ ++ + P SR + +
Sbjct: 126 LDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKEMK 184
Query: 123 VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTM 182
G E R+ + + I A ++GM Y +I T LD EP +
Sbjct: 185 RGR---EFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALD-LEPYRYSGV 239
Query: 183 NLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGFNSYALYAYDSVWL--VAHA 238
NL G L P + +W + L+ + SG + D+ L H
Sbjct: 240 NLT-GFRILNVDNPHVSA---IVEKWSMERLQAAPRAESGLLDGVMMT-DAALLYDAVHI 294
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFD 298
+ + T N + H + F Q+ R+ F SG +R D
Sbjct: 295 VSVCYQRAPQMTV-NSLQCHRHKAWRFGGRFMN-FIKEAQWEGLTGRIVFNKTSG-LRTD 351
Query: 299 ADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D++++ G ++G WS GL++
Sbjct: 352 FD-------LDIISLKEDGLEKVGVWSPAEGLNI 378
>UNIPROTKB|F1SV43 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0015277 "kainate selective glutamate receptor activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0001640 "adenylate cyclase inhibiting G-protein
coupled glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005887 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277
GeneTree:ENSGT00590000083056 OMA:EEQAFRF GO:GO:0001640
EMBL:FP104549 Ensembl:ENSSSCT00000004036 Uniprot:F1SV43
Length = 881
Score = 175 (66.7 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 61/230 (26%), Positives = 110/230 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+GYCID+ + ++L + + YG +N +++++ +K D AV +TI
Sbjct: 425 EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAPLTIT 484
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K +DF++P+M G+ ++ S ++FL P + +W+ +L V V+++
Sbjct: 485 HVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 544
Query: 516 LEHRFNN-EFRG--P--PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXX 562
+ RF+ E+ P P ++V T+ FWF ++ E +L R
Sbjct: 545 IA-RFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 603
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 604 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGA 653
Score = 152 (58.6 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 67/292 (22%), Positives = 122/292 (41%)
Query: 486 SPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRG--P--PSQQLV----TI-- 535
S ++FL P + +W+ +L V V++++ E+ P P ++V T+
Sbjct: 515 SVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLN 574
Query: 536 -FWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
FWF ++ E +L R SSYTA+L + LTV+++ S I+
Sbjct: 575 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 634
Query: 594 IDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG---- 647
D L T+ G V+DG+ + ++ E + + AL + + G
Sbjct: 635 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPS---ALVKNNEEGIQRT 691
Query: 648 --GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSE 705
A++ E IE ++++ NC +G G+G SP ++ AILQL E
Sbjct: 692 LTADYALLMESTTIE-YVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQE 750
Query: 706 NGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALI 757
L + KW + C + + S L ++ G+F++ L+++
Sbjct: 751 EDKLHIMKEKWWRGSGCPEEENKE---ASALGIQKIGGIFIVLAAGLVLSVL 799
Score = 123 (48.4 bits), Expect = 6.2e-17, Sum P(2) = 6.2e-17
Identities = 75/334 (22%), Positives = 121/334 (36%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VVA GP + + + N L VP + L + Y DY + HA+
Sbjct: 68 VVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYV--NLYPDYASLSHAI 125
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINSLL 122
DLV+Y WR ++ DD G + L A S+ ++ + P SR + +
Sbjct: 126 LDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKEMK 184
Query: 123 VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTM 182
G E R+ + + I A ++GM Y +I T LD EP +
Sbjct: 185 RGR---EFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALD-LEPYRYSGV 239
Query: 183 NLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGFNSYALYAYDSVWL--VAHA 238
NL G L P + +W + L+ + SG + D+ L H
Sbjct: 240 NLT-GFRILNVDNPHVSA---IVEKWSMERLQAAPRAESGLLDGVMMT-DAALLYDAVHI 294
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFD 298
+ + T N + H + F Q+ R+ F SG +R D
Sbjct: 295 VSVCYQRAPQMTV-NSLQCHRHKAWRFGGRFMN-FIKEAQWEGLTGRIVFNKTSG-LRTD 351
Query: 299 ADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D++++ G ++G WS GL++
Sbjct: 352 FD-------LDIISLKEDGLEKVGVWSPAEGLNI 378
>UNIPROTKB|Q38PU2 [details] [associations]
symbol:GRIK3 "Glutamate receptor ionotropic, kainate 3"
species:9541 "Macaca fascicularis" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=ISS] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISS] [GO:0007196 "adenylate cyclase-inhibiting G-protein
coupled glutamate receptor signaling pathway" evidence=ISS]
[GO:0007216 "G-protein coupled glutamate receptor signaling
pathway" evidence=ISS] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISS] [GO:0043197 "dendritic spine"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0043197
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839
HSSP:P22756 GO:GO:0001640 EMBL:DQ159935 ProteinModelPortal:Q38PU2
SMR:Q38PU2 Uniprot:Q38PU2
Length = 919
Score = 176 (67.0 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 62/230 (26%), Positives = 110/230 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+GYCID+ + ++L + + YG +N +V+++ +K D AV +TI
Sbjct: 463 EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTIT 522
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K +DF++P+M G+ ++ S ++FL P + +W+ +L V V+++
Sbjct: 523 HVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582
Query: 516 LEHRFNN-EFRG--P--PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXX 562
+ RF+ E+ P P ++V T+ FWF ++ E +L R
Sbjct: 583 IA-RFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGA 691
Score = 152 (58.6 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 66/289 (22%), Positives = 121/289 (41%)
Query: 486 SPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRG--P--PSQQLV----TI-- 535
S ++FL P + +W+ +L V V++++ E+ P P ++V T+
Sbjct: 553 SVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLN 612
Query: 536 -FWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
FWF ++ E +L R SSYTA+L + LTV+++ S I+
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 594 IDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIAL-ARGPKGGGVA 650
D L T+ G V+DG+ + ++ E + + + G + A
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTA 732
Query: 651 --AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGD 708
A++ E IE ++++ NC +G G+G SP ++ AILQL E
Sbjct: 733 DYALLMESTTIE-YVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQEEDK 791
Query: 709 LQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALI 757
L + KW + C + + S L ++ G+F++ L+++
Sbjct: 792 LHIMKEKWWRGSGCPEEENKE---ASALGIQKIGGIFIVLAAGLVLSVL 837
Score = 122 (48.0 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 75/334 (22%), Positives = 121/334 (36%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VVA GP + + + N L VP + L + Y DY + HA+
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYV--NLYPDYASLSHAI 163
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINSLL 122
DLV+Y WR ++ DD G + L A S+ ++ + P SR + +
Sbjct: 164 LDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQLPVDSDDSRPLLKEMK 222
Query: 123 VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTM 182
G E R+ + + I A ++GM Y +I T LD EP +
Sbjct: 223 RGR---EFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALD-LEPYRYSGV 277
Query: 183 NLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGFNSYALYAYDSVWL--VAHA 238
NL G L P + +W + L+ + SG + D+ L H
Sbjct: 278 NLT-GFRILNVDNPHVSA---IVEKWSMERLQAAPRAESGLLDGVMMT-DAALLYDAVHI 332
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFD 298
+ + T N + H + F Q+ R+ F SG +R D
Sbjct: 333 VSVCYQRAPQMTV-NSLQCHRHKAWRFGGRFMN-FIKEAQWEGLTGRIVFNKTSG-LRTD 389
Query: 299 ADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D++++ G ++G WS GL++
Sbjct: 390 FD-------LDIISLKEDGLEKVGVWSPADGLNI 416
>UNIPROTKB|J9NUD0 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 OMA:EEQAFRF EMBL:AAEX03009618
EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621
EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624
EMBL:AAEX03009625 Ensembl:ENSCAFT00000048003 Uniprot:J9NUD0
Length = 918
Score = 175 (66.7 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 61/230 (26%), Positives = 110/230 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+GYCID+ + ++L + + YG +N +++++ +K D AV +TI
Sbjct: 517 EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAPLTIT 576
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K +DF++P+M G+ ++ S ++FL P + +W+ +L V V+++
Sbjct: 577 HVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 636
Query: 516 LEHRFNN-EFRG--P--PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXX 562
+ RF+ E+ P P ++V T+ FWF ++ E +L R
Sbjct: 637 IA-RFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 695
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 696 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGA 745
Score = 123 (48.4 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 75/334 (22%), Positives = 121/334 (36%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VVA GP + + + N L VP + L + Y DY + HA+
Sbjct: 160 VVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYV--NLYPDYASLSHAI 217
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINSLL 122
DLV+Y WR ++ DD G + L A S+ ++ + P SR + +
Sbjct: 218 LDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKEMK 276
Query: 123 VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTM 182
G E R+ + + I A ++GM Y +I T LD EP +
Sbjct: 277 RGR---EFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALD-LEPYRYSGV 331
Query: 183 NLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGFNSYALYAYDSVWL--VAHA 238
NL G L P + +W + L+ + SG + D+ L H
Sbjct: 332 NLT-GFRILNVDNPHVSA---IVEKWSMERLQAAPRAESGLLDGVMMT-DAALLYDAVHI 386
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFD 298
+ + T N + H + F Q+ R+ F SG +R D
Sbjct: 387 VSVCYQRAPQMTV-NSLQCHRHKAWRFGGRFMN-FIKEAQWEGLTGRIVFNKTSG-LRTD 443
Query: 299 ADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D++++ G ++G WS GL++
Sbjct: 444 FD-------LDIISLKEDGLEKVGVWSPAEGLNI 470
Score = 114 (45.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 58/250 (23%), Positives = 104/250 (41%)
Query: 486 SPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRG--P--PSQQLV----TI-- 535
S ++FL P + +W+ +L V V++++ E+ P P ++V T+
Sbjct: 607 SVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLN 666
Query: 536 -FWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
FWF ++ E +L R SSYTA+L + LTV+++ S I+
Sbjct: 667 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 726
Query: 594 IDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG---- 647
D L T+ G V+DG+ + ++ E + + AL + + G
Sbjct: 727 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPS---ALVKNNEEGIQRT 783
Query: 648 --GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSE 705
A++ E IE ++++ NC +G G+G SP ++ AIL +
Sbjct: 784 LTADYALLMESTTIE-YVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILSAAG 842
Query: 706 NGDLQKIHNK 715
G Q H++
Sbjct: 843 GG--QAAHHE 850
>UNIPROTKB|F1PWT6 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 CTD:2899 KO:K05203 EMBL:AAEX03009618
EMBL:AAEX03009619 EMBL:AAEX03009620 EMBL:AAEX03009621
EMBL:AAEX03009622 EMBL:AAEX03009623 EMBL:AAEX03009624
EMBL:AAEX03009625 RefSeq:XP_850331.3 Ensembl:ENSCAFT00000005371
GeneID:608269 KEGG:cfa:608269 Uniprot:F1PWT6
Length = 919
Score = 175 (66.7 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 61/230 (26%), Positives = 110/230 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+GYCID+ + ++L + + YG +N +++++ +K D AV +TI
Sbjct: 463 EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAPLTIT 522
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K +DF++P+M G+ ++ S ++FL P + +W+ +L V V+++
Sbjct: 523 HVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582
Query: 516 LEHRFNN-EFRG--P--PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXX 562
+ RF+ E+ P P ++V T+ FWF ++ E +L R
Sbjct: 583 IA-RFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGA 691
Score = 152 (58.6 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 67/292 (22%), Positives = 122/292 (41%)
Query: 486 SPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRG--P--PSQQLV----TI-- 535
S ++FL P + +W+ +L V V++++ E+ P P ++V T+
Sbjct: 553 SVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLN 612
Query: 536 -FWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
FWF ++ E +L R SSYTA+L + LTV+++ S I+
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 594 IDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG---- 647
D L T+ G V+DG+ + ++ E + + AL + + G
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPS---ALVKNNEEGIQRT 729
Query: 648 --GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSE 705
A++ E IE ++++ NC +G G+G SP ++ AILQL E
Sbjct: 730 LTADYALLMESTTIE-YVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQE 788
Query: 706 NGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALI 757
L + KW + C + + S L ++ G+F++ L+++
Sbjct: 789 EDKLHIMKEKWWRGSGCPEEENKE---ASALGIQKIGGIFIVLAAGLVLSVL 837
Score = 123 (48.4 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 75/334 (22%), Positives = 121/334 (36%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VVA GP + + + N L VP + L + Y DY + HA+
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYV--NLYPDYASLSHAI 163
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINSLL 122
DLV+Y WR ++ DD G + L A S+ ++ + P SR + +
Sbjct: 164 LDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQLPLDSDDSRPLLKEMK 222
Query: 123 VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTM 182
G E R+ + + I A ++GM Y +I T LD EP +
Sbjct: 223 RGR---EFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALD-LEPYRYSGV 277
Query: 183 NLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGFNSYALYAYDSVWL--VAHA 238
NL G L P + +W + L+ + SG + D+ L H
Sbjct: 278 NLT-GFRILNVDNPHVSA---IVEKWSMERLQAAPRAESGLLDGVMMT-DAALLYDAVHI 332
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFD 298
+ + T N + H + F Q+ R+ F SG +R D
Sbjct: 333 VSVCYQRAPQMTV-NSLQCHRHKAWRFGGRFMN-FIKEAQWEGLTGRIVFNKTSG-LRTD 389
Query: 299 ADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D++++ G ++G WS GL++
Sbjct: 390 FD-------LDIISLKEDGLEKVGVWSPAEGLNI 416
>MGI|MGI:95817 [details] [associations]
symbol:Grik4 "glutamate receptor, ionotropic, kainate 4"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0045202
"synapse" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IDA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 MGI:MGI:95817
GO:GO:0005634 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425
GO:GO:0043204 GO:GO:0035235 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 EMBL:AC160123 GO:GO:0031960 eggNOG:NOG316680
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0032983 CTD:2900
KO:K05204 OMA:NRAPERL EMBL:AK032029 EMBL:AC122449 EMBL:AC136903
EMBL:AC140387 IPI:IPI00273856 RefSeq:NP_780690.2 UniGene:Mm.370291
ProteinModelPortal:Q8BMF5 SMR:Q8BMF5 STRING:Q8BMF5
PhosphoSite:Q8BMF5 PRIDE:Q8BMF5 Ensembl:ENSMUST00000034515
Ensembl:ENSMUST00000114865 GeneID:110637 KEGG:mmu:110637
InParanoid:Q8BMF5 OrthoDB:EOG402WRF NextBio:364375 Bgee:Q8BMF5
CleanEx:MM_GRIK4 Genevestigator:Q8BMF5
GermOnline:ENSMUSG00000032017 Uniprot:Q8BMF5
Length = 956
Score = 180 (68.4 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 71/300 (23%), Positives = 131/300 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+G+C+D+ + +L + + +YG + N + +V ++ K D AV +TI
Sbjct: 445 EGFCVDMLKELAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELIARKADLAVAGLTIT 504
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQK-LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ V + ++FL PF+ +WL +L V V+++
Sbjct: 505 AEREKVIDFSKPFMTLGISILYRVHMGRRPGYFSFLDPFSPGVWLFMLLAYLAVSCVLFL 564
Query: 516 LEHRFNNEFRGP-PSQQ-----LVTIFWFSFSTMF----FSHRENTVS--SLG-RXXXXX 562
+ E+ P P Q LV + S F F + +T++ +L R
Sbjct: 565 VARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSGV 624
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELK 621
SSYTA+L + LTVQ++ IE +D L T G G + + +
Sbjct: 625 WWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRY 684
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSG 681
R+ ++ S+ + +G +A +++ Y L S N +R T+ G
Sbjct: 685 QTYQRMWNYMYSKQPSVFVKSTEEG--IARVLNS-NYAFLLESTMNEYYRQRNCNLTQIG 741
Score = 153 (58.9 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 53/200 (26%), Positives = 87/200 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ IE +D L T G G + + + R+
Sbjct: 634 SSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNY 693
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELPYIELFMS-------KTNCEFRTVGQEFTKSGWG 683
++ S+ + +G +A +++ Y L S + NC +G G+G
Sbjct: 694 MYSKQPSVFVKSTEEG--IARVLNS-NYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYG 750
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWG 743
S + AILQL EN L+ + KW +C + D L +++ G
Sbjct: 751 IGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE---EDHRAKGLGMENIGG 807
Query: 744 LF--LICG--IACFLALIFF 759
+F LICG +A F+A++ F
Sbjct: 808 IFVVLICGLIVAIFMAMLEF 827
Score = 118 (46.6 bits), Expect = 7.4e-17, Sum P(2) = 7.4e-17
Identities = 47/205 (22%), Positives = 85/205 (41%)
Query: 129 ESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGV 188
++ ++H N TI A LGM + Y +I T+ S+ VD D +N+L
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMDSLVD-DRVNILGFS 269
Query: 189 VALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALYAYDSVWLVAHALDALLNEGG 247
+ + H + ++ W+ N + + +S L+ D+V+ V A+ L
Sbjct: 270 IFNQSHAFFQEFSQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAVVTAVQEL----- 322
Query: 248 KFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPA 307
N + + L+ S +++ G + L + GL+G I F++ N A
Sbjct: 323 -----N--RSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYA 375
Query: 308 YDVLNIGGTGSRRIGYWSNYSGLSV 332
+L G ++IG W GLS+
Sbjct: 376 LKILQFTRNGFQQIGQWHVAEGLSM 400
Score = 86 (35.3 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 55/240 (22%), Positives = 94/240 (39%)
Query: 5 VVAAIGPQSS-GIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQMHAV 63
VVA +GP SS + +IS++ E VP + LQ L S+ AV
Sbjct: 91 VVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVRFQLQRFTTLNLHPSNTDISVAV 150
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
A ++ ++ I + N +L L K +S + +R LL
Sbjct: 151 AGILNFFNCTTACLICAKAECLLNLEKLLRQFLISKDT-LSVRMLDD---TRDP-TPLLK 205
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
++ ++H N TI A LGM + Y +I T+ S+ VD D +N
Sbjct: 206 EIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMDSLVD-DRVN 264
Query: 184 LLQGVVALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALYAYDSVWLVAHALDAL 242
+L + + H + ++ W+ N + + +S L+ D+V+ V A+ L
Sbjct: 265 ILGFSIFNQSHAFFQEFSQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAVVTAVQEL 322
Score = 42 (19.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 88 GISVLGDA-LSKKRAKISYKAPFSPG 112
GIS+L + ++ S+ PFSPG
Sbjct: 521 GISILYRVHMGRRPGYFSFLDPFSPG 546
>UNIPROTKB|G3V164 [details] [associations]
symbol:GRIA4 "Glutamate receptor, ionotrophic, AMPA 4,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
EMBL:CH471065 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AP000641
EMBL:AP000673 EMBL:AP000813 EMBL:AP001561 UniGene:Hs.503743
HGNC:HGNC:4574 ChiTaRS:GRIA4 EMBL:AP001023 SMR:G3V164
Ensembl:ENST00000393127 Ensembl:ENST00000525187 Uniprot:G3V164
Length = 884
Score = 184 (69.8 bits), Expect = 8.7e-17, Sum P(3) = 8.7e-17
Identities = 70/248 (28%), Positives = 105/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 589 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 648
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +++ E
Sbjct: 649 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTYMRSAEPSVFTRTT 708
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 709 AEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSSLRNAV 768
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+L+E G L K+ NKW EC + S LSL + G+F I G+A
Sbjct: 769 NLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLA 828
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 829 MLVALIEF 836
Score = 183 (69.5 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 64/227 (28%), Positives = 105/227 (46%)
Query: 400 KGYCIDVF-EAAVNL-LPYP---VPHNYIMYG-NGKRNPIYNDIVQQVALNKFDAAVGDI 453
+GYC+D+ E A ++ + Y VP YG I+N +V ++ K + A+ +
Sbjct: 444 EGYCVDLASEIAKHIGIKYKIAIVPDG--KYGARDADTKIWNGMVGELVYGKAEIAIAPL 501
Query: 454 TIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-A 511
TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +
Sbjct: 502 TITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVS 559
Query: 512 VVWILEHRFNN-EFR---------GPPSQQ-----LVTIFWFSFSTMFFSHRENTVSSL- 555
VV L RF+ E+ GP Q + WFS + + SL
Sbjct: 560 VVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLS 619
Query: 556 GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 620 GRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 666
Score = 121 (47.7 bits), Expect = 8.7e-17, Sum P(3) = 8.7e-17
Identities = 66/278 (23%), Positives = 117/278 (42%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISY--KAPFSPGASRSAIN 119
A+ L+++Y W + ++ D D G S+L A+ +K + + A + +
Sbjct: 141 ALLSLLDHYEWNCFVFLY-DTD---RGYSIL-QAIMEKAGQNGWHVSAICVENFNDVSYR 195
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
LL + + + FV+ + I S+G Y +I + L S E
Sbjct: 196 QLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHVKGYHYIIAN-LGFKDISLERFIH 254
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE----NSPSGFNSYALYAYDSVWLV 235
N+ G + +TP +K + RWK L +E +P + S AL YD V ++
Sbjct: 255 GGANVT-GFQLVDFNTPMV-IK--LMDRWKKLDQREYPGSETPPKYTS-AL-TYDGVLVM 308
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
A +L + K S D + N ++ + G +TL ++ GL+G +
Sbjct: 309 AETFRSLRRQ--KIDISRRGNAGDC---LANPAA--PWGQGIDMERTLKQVRIQGLTGNV 361
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVV 333
+FD VN DV + TG R++GYW++ L ++
Sbjct: 362 QFDHYGRRVNYTMDVFELKSTGPRKVGYWNDMDKLVLI 399
Score = 38 (18.4 bits), Expect = 2.3e-08, Sum P(3) = 2.3e-08
Identities = 10/34 (29%), Positives = 19/34 (55%)
Query: 55 SDYYQMHAV---ADLVEYYGWREVIAIFVDDDYG 85
+D Y+ + V +++ ++ G + IAI D YG
Sbjct: 440 NDKYEGYCVDLASEIAKHIGIKYKIAIVPDGKYG 473
Score = 37 (18.1 bits), Expect = 8.7e-17, Sum P(3) = 8.7e-17
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +++ P+ S +
Sbjct: 833 LIEFCYKSRAEAKRMKVAKSAQTFNPTSSQN 863
>UNIPROTKB|F1M4B0 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0032230 "positive regulation of
synaptic transmission, GABAergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
IPI:IPI00952320 ProteinModelPortal:F1M4B0
Ensembl:ENSRNOT00000067147 ArrayExpress:F1M4B0 Uniprot:F1M4B0
Length = 895
Score = 175 (66.7 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 70/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 422 EGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 481
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 482 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 541
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 542 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 601
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 602 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 661
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 662 TYEKMWAFMSSRQQS--ALVKNSDEGIQRVLTTD--YA-LLMESTSIEYVT 707
Score = 161 (61.7 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 569 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 628
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 629 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQS--ALVKNSDEGI 686
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 687 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 745
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 746 LQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 799
Query: 763 VCGQF 767
G+F
Sbjct: 800 -IGEF 803
Score = 121 (47.7 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 82/338 (24%), Positives = 130/338 (38%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ S Y DY + AV
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDSRDLFYI--NLYPDYAAISRAV 122
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P A++ A LL
Sbjct: 123 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPPANKDA-KPLL- 177
Query: 124 GANLMESRVFVV--HVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ +S+ F V + +T I +GM Y + T LD E
Sbjct: 178 -KEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSG 235
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWL 234
+N+ G L P + I +W + L+ +G + A YD+V++
Sbjct: 236 VNMT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYM 291
Query: 235 VAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGE 294
VA A + K +NL +DG L R+ F G
Sbjct: 292 VAIASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDG----LTG--RITFNKTDG- 344
Query: 295 IRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
+R D D D++++ G+ +IG W++ SGL++
Sbjct: 345 LRKDFD-------LDIISLKEEGTEKIGIWNSNSGLNM 375
>ZFIN|ZDB-GENE-070424-223 [details] [associations]
symbol:grin2ab "glutamate receptor, ionotropic,
N-methyl D-aspartate 2A, b" species:7955 "Danio rerio" [GO:0004872
"receptor activity" evidence=IEA] [GO:0005215 "transporter
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0005216
"ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070424-223
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 EMBL:BX005261
GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 EMBL:CT573178 IPI:IPI00489045
Ensembl:ENSDART00000103652 Ensembl:ENSDART00000137900
Uniprot:F1QDE5
Length = 1445
Score = 187 (70.9 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 58/237 (24%), Positives = 109/237 (45%)
Query: 372 NGMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR 430
N +P R + + + +V K KG+CID+ + + + + G +GK+
Sbjct: 422 NSVPCRKHIKDNTTEGSYVKKC-----CKGFCIDILKKIARNVKFTYDLYLVTNGKHGKK 476
Query: 431 -NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWA 489
N ++N +V +V K AVG +TI R++ +DF+ P++E+G+ V+ SP A
Sbjct: 477 INNVWNGMVGEVVYKKAVMAVGSLTINEERSEAIDFSVPFVETGISVMVSRSNGTVSPSA 536
Query: 490 FLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEF---RGP--PSQQLVTIFWFS 539
FL+PF+ +W++ L V A+ V++ E FN + P PS + W
Sbjct: 537 FLEPFSASVWVMMFVMLLIVTAIAVFLFEFISPLGFNRNLAQGKDPHGPSFTIGKAVWLL 596
Query: 540 FSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+ +F + +N + + +SYTA+L + + ++ Q+ G+
Sbjct: 597 WGLVFNNSVPVQNPRGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGL 653
Score = 100 (40.3 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 46/199 (23%), Positives = 88/199 (44%)
Query: 572 SSYTASLTSILTVQQLTSQIEGID-----SLISSTEPI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ Q+ G+ S S + P G V +GS N +
Sbjct: 631 ASYTANLAAFMIQEEFVDQVTGLSDRKFQSPYSYSPPFRFGTVPNGSTERN-IRKNYPAM 689
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVGQE--FTKS 680
+VK ++ K G + A + + + + + C+ T+G F +
Sbjct: 690 HQYMVKYHQTGVVDALVSL--KTGKLDAFIYDAAVLNYMAGRDDGCKLVTIGSGYIFATT 747
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKS 740
G+G A Q+ S + AIL + +G+++++ +WLT C + + S+L + +
Sbjct: 748 GYGIAMQKGSYWKRLVDLAILGIIGDGEMEELEAQWLT-GICHNEKNEVMS--SQLDVDN 804
Query: 741 FWGLFLICGIACFLALIFF 759
G+F + A L+LI F
Sbjct: 805 MAGVFYMLAAAMALSLITF 823
Score = 69 (29.3 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 30/159 (18%), Positives = 67/159 (42%)
Query: 10 GPQSSGIAHVISHVVNELNVPLLSF-GATDPTL----TSLQYPYFLRTTQSDYYQMHAVA 64
G +A ++ V ++ ++P+L G + T+ +S + F + Q + M A+
Sbjct: 92 GTDQEAVAQMLDFVSSQTSMPILGIHGGSAMTMAEKDSSSSFFQFGASLQQEALLMLAI- 150
Query: 65 DLVEYYGWREVIAIFVDDDYG-RNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
+E Y W V ++ G + I+ + + + ++ + + V
Sbjct: 151 --MEEYDWH-VFSVVTTKFPGFQEFIATVRVTVDHSFVRWDLQSVVTLDGVGEPEDRAHV 207
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
++S V +++ + D + A+SLG+T +VWI
Sbjct: 208 QLKRIQSPVILLYCSKDEAALVMEEARSLGLTGAGFVWI 246
Score = 37 (18.1 bits), Expect = 1.1e-16, Sum P(4) = 1.1e-16
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 175 EPVDIDTMNLLQGVVALRHHTPDTDLKKNFISR 207
+ VDI T ++ V R H D + +++ +
Sbjct: 410 DDVDILTGTCMRNSVPCRKHIKDNTTEGSYVKK 442
>UNIPROTKB|F1N246 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0048266
GO:GO:0035235 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 EMBL:DAAA02000152 EMBL:DAAA02000153
EMBL:DAAA02000154 EMBL:DAAA02000155 EMBL:DAAA02000156
EMBL:DAAA02000157 IPI:IPI00707470 Ensembl:ENSBTAT00000026819
OMA:ICALICL Uniprot:F1N246
Length = 869
Score = 179 (68.1 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ +K D AV +TI
Sbjct: 423 EGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTIT 482
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 483 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 542
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 543 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 602
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 603 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 662
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 663 TYEKMWAFMSSRQQ--TALVKNSDEGIHRVLTTD--YA-LLMESTSIEYVT 708
Score = 116 (45.9 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 75/336 (22%), Positives = 127/336 (37%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + AV
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNRDLFYI--NLYPDYAAISRAV 122
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 123 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 178
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I +GM Y + T LD E +N
Sbjct: 179 EMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 237
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P I +W + L+ +G + A YD+V++VA
Sbjct: 238 MT-GFRLLNIDNPHVSA---IIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 293
Query: 237 HALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIR 296
A + + T S+ + H L + + + + R+ F G +R
Sbjct: 294 IAS----HRASQLTVSS-LQCHRHKPWRLGPRFMNLIKEARWWDGLTGRITFNKTDG-LR 347
Query: 297 FDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D D++++ G+ +IG W++ SGL++
Sbjct: 348 KDFD-------LDIISLKEEGTEKIGIWNSNSGLNM 376
Score = 111 (44.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 62/246 (25%), Positives = 99/246 (40%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 570 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 629
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 630 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVKNSDEGI 687
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G P L+ A++
Sbjct: 688 HRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIADPFMRKLTLAMIN 746
Query: 703 LSENGDLQKIHNKWLTYNECSMD-LSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFC 761
L + L W+ + D L A GS ++ S LFLI I+ L F C
Sbjct: 747 LQQEKSLHFNQEYWIRGHGRPKDSLQLAPWLGS-FNIAS---LFLI--ISQSLPNSVFIC 800
Query: 762 RVCGQF 767
+ QF
Sbjct: 801 YMYFQF 806
>UNIPROTKB|I3LT35 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0051967
"negative regulation of synaptic transmission, glutamatergic"
evidence=IEA] [GO:0048266 "behavioral response to pain"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0051967 GO:GO:0014054
GO:GO:0030054 GO:GO:0045211 GO:GO:0030425 GO:GO:0048266
GO:GO:0035235 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:CU861922
EMBL:FP325290 Ensembl:ENSSSCT00000028121 Uniprot:I3LT35
Length = 896
Score = 179 (68.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ +K D AV +TI
Sbjct: 422 EGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTIT 481
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 482 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 541
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 542 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 601
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 602 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 661
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 662 TYEKMWAFMSSRQQ--TALVKNSDEGIQRVLTTD--YA-LLMESTSIEYVT 707
Score = 159 (61.0 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 64/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 569 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 628
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 629 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVKNSDEGI 686
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 687 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 745
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + + S L +++ G+F++ +A L L F
Sbjct: 746 LQEEGKLHMMKEKWWRGNGCPEEDNKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 799
Query: 763 VCGQF 767
G+F
Sbjct: 800 -IGEF 803
Score = 116 (45.9 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 77/336 (22%), Positives = 128/336 (38%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + AV
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYI--NLYPDYAAISRAV 122
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 123 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 178
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I +GM Y + T LD E +N
Sbjct: 179 EMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 237
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 238 MT-GFRLLNIDNPHVS---SIIDKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 293
Query: 237 HALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIR 296
A + + T S+ + H L + + Q T R+ F G +R
Sbjct: 294 IAS----HRASQLTVSS-LQCHRHKPWRLGPRFMNLIKEAQWDGLTG-RITFNKTDG-LR 346
Query: 297 FDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D D++++ G+ +IG W++ SGL++
Sbjct: 347 KDFD-------LDIISLKEEGTEKIGIWNSNSGLNM 375
>RGD|2734 [details] [associations]
symbol:Grik4 "glutamate receptor, ionotropic, kainate 4"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006811 "ion transport" evidence=TAS] [GO:0007268
"synaptic transmission" evidence=TAS] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=TAS] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=TAS] [GO:0016020
"membrane" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030424
"axon" evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031960
"response to corticosteroid stimulus" evidence=IEP] [GO:0032983
"kainate selective glutamate receptor complex" evidence=ISO]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=TAS] [GO:0042734 "presynaptic membrane" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0045211 "postsynaptic membrane" evidence=IEA;ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060
Pfam:PF10613 PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
RGD:2734 GO:GO:0005634 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0043204 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 GO:GO:0031960 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2900 KO:K05204 OrthoDB:EOG402WRF EMBL:X59996
EMBL:U08257 IPI:IPI00326553 PIR:JS0685 RefSeq:NP_036704.1
UniGene:Rn.10049 ProteinModelPortal:Q01812 SMR:Q01812 STRING:Q01812
PRIDE:Q01812 GeneID:24406 KEGG:rno:24406 UCSC:RGD:2734
InParanoid:Q01812 BindingDB:Q01812 ChEMBL:CHEMBL3044 NextBio:603213
ArrayExpress:Q01812 Genevestigator:Q01812
GermOnline:ENSRNOG00000030910 Uniprot:Q01812
Length = 956
Score = 173 (66.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 72/301 (23%), Positives = 130/301 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+G+C+D+ + +L + + +YG + N + +V ++ K D AV +TI
Sbjct: 445 EGFCVDMLKELAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELIARKADLAVAGLTIT 504
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAF--LKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ V + P F L PF+ +WL +L V V++
Sbjct: 505 AEREKVIDFSKPFMTLGISILYRVH-MGRRPGYFSSLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 515 ILEHRFNNEFRGP-PSQQ-----LVTIFWFSFSTMF----FSHRENTVS--SLG-RXXXX 561
++ E+ P P Q LV + S F F + +T++ +L R
Sbjct: 564 LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSG 623
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDEL 620
SSYTA+L + LTVQ++ IE +D L T G G + + +
Sbjct: 624 VWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSR 683
Query: 621 KIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKS 680
R+ ++ S+ + +G +A +++ Y L S N +R T+
Sbjct: 684 YQTYQRMWNYMYSKQPSVFVKSTEEG--IARVLNS-NYAFLLESTMNEYYRQRNCNLTQI 740
Query: 681 G 681
G
Sbjct: 741 G 741
Score = 153 (58.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 53/200 (26%), Positives = 87/200 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ IE +D L T G G + + + R+
Sbjct: 634 SSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNY 693
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELPYIELFMS-------KTNCEFRTVGQEFTKSGWG 683
++ S+ + +G +A +++ Y L S + NC +G G+G
Sbjct: 694 MYSKQPSVFVKSTEEG--IARVLNS-NYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYG 750
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWG 743
S + AILQL EN L+ + KW +C + D L +++ G
Sbjct: 751 IGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE---EDHRAKGLGMENIGG 807
Query: 744 LF--LICG--IACFLALIFF 759
+F LICG +A F+A++ F
Sbjct: 808 IFVVLICGLIVAIFMAMLEF 827
Score = 122 (48.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 48/205 (23%), Positives = 85/205 (41%)
Query: 129 ESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGV 188
++ ++H N TI A LGM + Y +I T+ S+ VD D +N+L
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMDSLVD-DRVNILGFS 269
Query: 189 VALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALYAYDSVWLVAHALDALLNEGG 247
+ + H + ++ W+ N + + +S L+ D+V+ V A+ L
Sbjct: 270 IFNQSHAFFQEFSQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAVVTAVQEL----- 322
Query: 248 KFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPA 307
N + + L+ S +++ G + L + GL+G I F++ N A
Sbjct: 323 -----N--RSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYA 375
Query: 308 YDVLNIGGTGSRRIGYWSNYSGLSV 332
+L G R+IG W GLS+
Sbjct: 376 LKILQFTRNGFRQIGQWHVAEGLSM 400
Score = 86 (35.3 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 55/240 (22%), Positives = 94/240 (39%)
Query: 5 VVAAIGPQSS-GIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQMHAV 63
VVA +GP SS + +IS++ E VP + LQ L S+ AV
Sbjct: 91 VVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVRFQLQRFTTLNLHPSNTDISVAV 150
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
A ++ ++ I + N +L L K +S + +R LL
Sbjct: 151 AGILNFFNCTTACLICAKAECLLNLEKLLRQFLISKDT-LSVRMLDD---TRDP-TPLLK 205
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
++ ++H N TI A LGM + Y +I T+ S+ VD D +N
Sbjct: 206 EIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMDSLVD-DRVN 264
Query: 184 LLQGVVALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALYAYDSVWLVAHALDAL 242
+L + + H + ++ W+ N + + +S L+ D+V+ V A+ L
Sbjct: 265 ILGFSIFNQSHAFFQEFSQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAVVTAVQEL 322
>UNIPROTKB|Q01812 [details] [associations]
symbol:Grik4 "Glutamate receptor ionotropic, kainate 4"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2734
GO:GO:0005634 GO:GO:0007268 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0043204 GO:GO:0042734 GO:GO:0043195
InterPro:IPR001828 GO:GO:0031960 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2900 KO:K05204 OrthoDB:EOG402WRF EMBL:X59996
EMBL:U08257 IPI:IPI00326553 PIR:JS0685 RefSeq:NP_036704.1
UniGene:Rn.10049 ProteinModelPortal:Q01812 SMR:Q01812 STRING:Q01812
PRIDE:Q01812 GeneID:24406 KEGG:rno:24406 UCSC:RGD:2734
InParanoid:Q01812 BindingDB:Q01812 ChEMBL:CHEMBL3044 NextBio:603213
ArrayExpress:Q01812 Genevestigator:Q01812
GermOnline:ENSRNOG00000030910 Uniprot:Q01812
Length = 956
Score = 173 (66.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 72/301 (23%), Positives = 130/301 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+G+C+D+ + +L + + +YG + N + +V ++ K D AV +TI
Sbjct: 445 EGFCVDMLKELAEILRFNYKIRLVGDGVYGVPEANGTWTGMVGELIARKADLAVAGLTIT 504
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAF--LKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ V + P F L PF+ +WL +L V V++
Sbjct: 505 AEREKVIDFSKPFMTLGISILYRVH-MGRRPGYFSSLDPFSPGVWLFMLLAYLAVSCVLF 563
Query: 515 ILEHRFNNEFRGP-PSQQ-----LVTIFWFSFSTMF----FSHRENTVS--SLG-RXXXX 561
++ E+ P P Q LV + S F F + +T++ +L R
Sbjct: 564 LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPVGGFMQQGSTIAPRALSTRCVSG 623
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDEL 620
SSYTA+L + LTVQ++ IE +D L T G G + + +
Sbjct: 624 VWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSR 683
Query: 621 KIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKS 680
R+ ++ S+ + +G +A +++ Y L S N +R T+
Sbjct: 684 YQTYQRMWNYMYSKQPSVFVKSTEEG--IARVLNS-NYAFLLESTMNEYYRQRNCNLTQI 740
Query: 681 G 681
G
Sbjct: 741 G 741
Score = 153 (58.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 53/200 (26%), Positives = 87/200 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ IE +D L T G G + + + R+
Sbjct: 634 SSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGTIHGGSSMTFFQNSRYQTYQRMWNY 693
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELPYIELFMS-------KTNCEFRTVGQEFTKSGWG 683
++ S+ + +G +A +++ Y L S + NC +G G+G
Sbjct: 694 MYSKQPSVFVKSTEEG--IARVLNS-NYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYG 750
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWG 743
S + AILQL EN L+ + KW +C + D L +++ G
Sbjct: 751 IGMPVGSVFRDEFDLAILQLQENNRLEILKRKWWEGGKCPKE---EDHRAKGLGMENIGG 807
Query: 744 LF--LICG--IACFLALIFF 759
+F LICG +A F+A++ F
Sbjct: 808 IFVVLICGLIVAIFMAMLEF 827
Score = 122 (48.0 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 48/205 (23%), Positives = 85/205 (41%)
Query: 129 ESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGV 188
++ ++H N TI A LGM + Y +I T+ S+ VD D +N+L
Sbjct: 211 KTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMDSLVD-DRVNILGFS 269
Query: 189 VALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALYAYDSVWLVAHALDALLNEGG 247
+ + H + ++ W+ N + + +S L+ D+V+ V A+ L
Sbjct: 270 IFNQSHAFFQEFSQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAVVTAVQEL----- 322
Query: 248 KFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPA 307
N + + L+ S +++ G + L + GL+G I F++ N A
Sbjct: 323 -----N--RSQEIGVKPLSCGSAQIWQHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYA 375
Query: 308 YDVLNIGGTGSRRIGYWSNYSGLSV 332
+L G R+IG W GLS+
Sbjct: 376 LKILQFTRNGFRQIGQWHVAEGLSM 400
Score = 86 (35.3 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 55/240 (22%), Positives = 94/240 (39%)
Query: 5 VVAAIGPQSS-GIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQMHAV 63
VVA +GP SS + +IS++ E VP + LQ L S+ AV
Sbjct: 91 VVAVLGPSSSPASSSIISNICGEKEVPHFKVAPEEFVRFQLQRFTTLNLHPSNTDISVAV 150
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
A ++ ++ I + N +L L K +S + +R LL
Sbjct: 151 AGILNFFNCTTACLICAKAECLLNLEKLLRQFLISKDT-LSVRMLDD---TRDP-TPLLK 205
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
++ ++H N TI A LGM + Y +I T+ S+ VD D +N
Sbjct: 206 EIRDDKTATIIIHANASMSHTILLKAAELGMVSAYYTYIFTNLEFSLQRMDSLVD-DRVN 264
Query: 184 LLQGVVALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALYAYDSVWLVAHALDAL 242
+L + + H + ++ W+ N + + +S L+ D+V+ V A+ L
Sbjct: 265 ILGFSIFNQSHAFFQEFSQSLNQSWQENCDHVPFTGPALSSALLF--DAVYAVVTAVQEL 322
>FB|FBgn0004620 [details] [associations]
symbol:GluRIIA "Glutamate receptor IIA" species:7227
"Drosophila melanogaster" [GO:0005886 "plasma membrane"
evidence=ISS;IDA] [GO:0008066 "glutamate receptor activity"
evidence=IDA] [GO:0031594 "neuromuscular junction" evidence=IDA]
[GO:0015277 "kainate selective glutamate receptor activity"
evidence=ISS] [GO:0007268 "synaptic transmission" evidence=IDA;IMP]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:1900075
"positive regulation of neuromuscular synaptic transmission"
evidence=IMP] [GO:0008328 "ionotropic glutamate receptor complex"
evidence=IPI] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0051968 "positive regulation of synaptic transmission,
glutamatergic" evidence=IMP] [GO:0014069 "postsynaptic density"
evidence=IDA] [GO:0046928 "regulation of neurotransmitter
secretion" evidence=IGI] [GO:0060025 "regulation of synaptic
activity" evidence=IMP;IDA] InterPro:IPR001320 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0014069 EMBL:AE014134
GO:GO:0030054 GO:GO:0045211 GO:GO:0046928 GO:GO:0031594
InterPro:IPR001828 KO:K05313 GO:GO:0005234
GeneTree:ENSGT00700000104113 GO:GO:0015277 HSSP:P19491
GO:GO:0060025 PIR:A39280 FlyBase:FBgn0004620 EMBL:BT010006
RefSeq:NP_523484.2 UniGene:Dm.2601 SMR:Q9VMP4 STRING:Q9VMP4
EnsemblMetazoa:FBtr0079106 GeneID:33788 KEGG:dme:Dmel_CG6992
UCSC:CG6992-RI CTD:33788 InParanoid:Q9VMP4 OMA:DELENIW
GenomeRNAi:33788 NextBio:785261 Uniprot:Q9VMP4
Length = 907
Score = 153 (58.9 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 51/195 (26%), Positives = 84/195 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTEP-IGVQDGSFAWNYLVDELKIAESRLVKL 630
S+YTA+L + LT + S I+ + LI + G G + + R
Sbjct: 643 STYTANLAAFLTSNKWQSSIKSLQDLIEQDKVHFGSMRGGSTSLFFSESNDTDYQRA--W 700
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKT--------NCEFRTVGQEFTKSGW 682
M++++ + GVA + E M T NC+ +G++ + +
Sbjct: 701 NQMKDFNPSAFTSTNKEGVARVRKEKGGYAFLMETTSLTYNIERNCDLTQIGEQIGEKHY 760
Query: 683 GFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFW 742
G A S +LS +ILQLSE G+LQK+ NKW + + D S + G LS+
Sbjct: 761 GLAVPLGSDYRTNLSVSILQLSERGELQKMKNKWWKNHNVTCD-SYHEVDGDELSIIELG 819
Query: 743 GLFLICGIACFLALI 757
G+FL+ + +I
Sbjct: 820 GVFLVLAGGVLIGVI 834
Score = 131 (51.2 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 31/107 (28%), Positives = 59/107 (55%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGNGKRNPI---YNDIVQQVALNKFDAAVGDITIV 456
+GY +D+ L+ + I+ GNGK NP ++ I++++ + V D+TI
Sbjct: 456 EGYAVDLISKLSELMEFDYEF-MIVNGNGKYNPETKQWDGIIRKLIDHHAQIGVCDLTIT 514
Query: 457 TNRTKLVDFTQPYMESGLVVV---APVQKLKSSPWAFLKPFTIPMWL 500
R +VDFT P+M+ G+ ++ +P + + +AFL+PF + +W+
Sbjct: 515 QMRRSVVDFTVPFMQLGISILHYKSPPEP--KNQFAFLEPFAVEVWI 559
Score = 55 (24.4 bits), Expect = 2.9e-16, Sum P(3) = 2.9e-16
Identities = 16/82 (19%), Positives = 33/82 (40%)
Query: 1 MENEVVAAIGPQSSGIAHVISHVVNELNVPLLSFGAT-DPTLTS-LQYPYFLRTTQSDYY 58
+ N V A GP S + +++ + N +P + + + T L + + S
Sbjct: 89 ISNGVAAIFGPSSKAASDIVAQIANATGIPHIEYDLKLEATRQEQLNHQMSINVAPSLSV 148
Query: 59 QMHAVADLVEY-YGWREVIAIF 79
A ++++ Y WR I+
Sbjct: 149 LSRAYFEIIKSNYEWRTFTLIY 170
Score = 50 (22.7 bits), Expect = 4.7e-08, Sum P(3) = 4.7e-08
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 465 FTQPYMESGLVVVAPV---QKLKSSPWAFLKPFTIP-MWLVTGGFFLFVGAVVWILEHRF 520
F Q M V +A + + L +P A P + +W V +L VG+ I++
Sbjct: 563 FAQLIMTLAFVFIARLSYREWLPPNP-AIQDPDELENIWNVNNSTWLMVGS---IMQQGC 618
Query: 521 NNEFRGPPSQQLVTIFWFSFSTMFFS 546
+ RGP + L ++WF F+ M S
Sbjct: 619 DILPRGPHMRILTGMWWF-FALMMLS 643
Score = 44 (20.5 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 13/45 (28%), Positives = 20/45 (44%)
Query: 37 TDPTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYG--WREVIAIF 79
T L LQ ++ SDY ++ +AD + Y W+E F
Sbjct: 172 TPEGLARLQDLMNIQALNSDYVKLRNLADYADDYRILWKETDETF 216
>UNIPROTKB|F1NW92 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AADN02028659 EMBL:AADN02028660 IPI:IPI00585053
Ensembl:ENSGALT00000006493 Uniprot:F1NW92
Length = 902
Score = 191 (72.3 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 62/225 (27%), Positives = 102/225 (45%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVALNKFDAAVGDITI 455
+GYC+++ + Y + G G R+P +N +V ++ + D AV +TI
Sbjct: 436 EGYCVELAAEIAKHVGYHYRLEIVRDGKYGARDPDTKTWNGMVGELVYGRADVAVAPLTI 495
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG-AVV 513
R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G +VV
Sbjct: 496 TLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGVSVV 553
Query: 514 WILEHRFN------NEF---RGPPSQQLVTIF------WFSFSTMFFSHRENTVSSL-GR 557
L RF+ EF R P+ F WFS + + SL GR
Sbjct: 554 LFLVSRFSPYEWHTEEFEEGRDQPANDQTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGR 613
Query: 558 XXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
SSYTA+L + LTV+++ S IE + L TE
Sbjct: 614 IVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 658
Score = 176 (67.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 592 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 651
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 652 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 772 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEF 828
Score = 100 (40.3 bits), Expect = 3.1e-16, Sum P(2) = 3.1e-16
Identities = 64/292 (21%), Positives = 117/292 (40%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSL 121
A+ ++E+Y W++ + I+ D D G + + + D ++K +++ + + L
Sbjct: 132 ALISVIEHYSWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVTAVNILT--TTEEGYRVL 188
Query: 122 LVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ R+ VV + I S L Y +I + +D T+ +
Sbjct: 189 FQELQKKKERLVVVDCESERLNIILSKIIKLEKNGNGYHYILANMGFMDIDLTKFRESGA 248
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFN--SY-ALYAYDSVWLVAHA 238
N+ G L ++T DT + + +W+N +E + Y + YD V ++A A
Sbjct: 249 -NVT-GF-QLVNYT-DT-VPARIMQQWRNNDARELPRVDWKRPKYTSALTYDGVRVMAEA 303
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGLSGEIRF 297
L + + S D L++ V G G + L ++ F GLSG ++F
Sbjct: 304 FQNLRRQ--RIDISRRGNAGDC------LANPAVPWGQGIDIQRALQQVRFEGLSGNVQF 355
Query: 298 DADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNR 349
+ N V+ + G R+IGYW+ L VA + S NR
Sbjct: 356 NEKGRRTNYTLHVIEMKHDGIRKIGYWNEDEKLVPVAIDTQTGNESTSLQNR 407
>ZFIN|ZDB-GENE-030131-6502 [details] [associations]
symbol:grik1a "glutamate receptor, ionotropic,
kainate 1a" species:7955 "Danio rerio" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0045202
"synapse" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-030131-6502 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 KO:K05201
GeneTree:ENSGT00590000083056 EMBL:AL837524 EMBL:CT573197
EMBL:AL954816 IPI:IPI00611951 RefSeq:XP_001924038.3
UniGene:Dr.14817 UniGene:Dr.155893 ProteinModelPortal:E9QGN5
Ensembl:ENSDART00000147089 GeneID:798001 KEGG:dre:798001 CTD:798001
NextBio:20933239 ArrayExpress:E9QGN5 Bgee:E9QGN5 Uniprot:E9QGN5
Length = 904
Score = 186 (70.5 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 72/291 (24%), Positives = 129/291 (44%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ + D AV +TI
Sbjct: 461 EGYCLDLLKELSNILGFTYEVKLVTDGKYGAQNDKGEWNGMVRELIDHIADLAVAPLTIT 520
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P T +W+ L V V+++
Sbjct: 521 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLTPDIWMYVLLACLGVSCVLFV 580
Query: 516 LEHRFNNEFRGP----PSQQLV----TIF---WFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P PS ++V T+ WF + + E +L R
Sbjct: 581 IARFTPYEWYNPHPCNPSSEVVENNFTLLNSLWFGVAALMRQGSELMPKALSTRILGGIW 640
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISST--EPIGVQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T E V+DGS + ++
Sbjct: 641 WFFTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTRIEYGAVRDGSTMTFFKKSKIS 700
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + + + AL + K G + + Y L M T+ E+ T
Sbjct: 701 TYEKMWAFMSSRK--NTALVKNSKDGITRVLTTD--YA-LLMESTSIEYIT 746
Score = 164 (62.8 bits), Expect = 7.5e-14, Sum P(2) = 7.5e-14
Identities = 59/204 (28%), Positives = 93/204 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISST--EPIGVQDGSFAWNYLVDELKIAESRLVK 629
SSYTA+L + LTV+++ S I+ D L T E V+DGS + ++ E
Sbjct: 649 SSYTANLAAFLTVERMDSPIDSADDLAKQTRIEYGAVRDGSTMTFFKKSKISTYEKMWAF 708
Query: 630 LKNMEEYSIALARGPKGGGVA------AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWG 683
+ + + + AL + K G A++ E IE ++++ NC VG G+G
Sbjct: 709 MSSRK--NTALVKNSKDGITRVLTTDYALLMESTSIE-YITQRNCNLTQVGGLIDSKGYG 765
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWG 743
SP ++ AILQL E G L + KW N C + S S L +++ G
Sbjct: 766 VGTPIGSPYRDKVTIAILQLQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGG 822
Query: 744 LFLICGIACFLALIFFFCRVCGQF 767
+F++ +A L L F G+F
Sbjct: 823 IFIV--LAAGLVLSVFVA--IGEF 842
Score = 105 (42.0 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 71/301 (23%), Positives = 120/301 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINS 120
A+ D+V +Y W+ V ++ +D G + L A SK KI + P G SR +
Sbjct: 162 AILDIVIFYKWKCVTVVY-EDSTGLMRMQELIKAPSKNNLKIRIRQLPSGGGDSRPLLKE 220
Query: 121 LLVGANLMESRVFVVH-VNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDI 179
+ E +V+ + + S+GM Y + T LD EP
Sbjct: 221 MK-----KEKEFYVIFDCSYQVAAELLKQLMSMGMMTEYYHFFFTTLDLFALD-LEPYRY 274
Query: 180 DTMNLLQGVVALRHHTPDTDLKKNFISRW---KNL---KYKENSPSGF-NSYALYAYDSV 232
+N+ A R D + I +W + L K + SG + A YD+V
Sbjct: 275 SGVNM----TAFRLLNLDDSYVASVIQKWSMERQLAPPKPESGLMSGIMTTAAALMYDAV 330
Query: 233 WLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLS 292
++VA A + T S+ L + + G +F+ + GL+
Sbjct: 331 FMVAVASQ----RATQMTVSS-----------LQCHRHKPWRYGPRFMNLFKEAQWDGLT 375
Query: 293 GEIRFDADKNLVNPA-YDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKP-PNSSSNRH 350
G I + L D++++ G+ +IG W++Y+GL++ EI K +S +NR
Sbjct: 376 GRIVLNKTDGLRKEFNLDLISLKEDGTAKIGVWNSYTGLNLT--EIKDNKNITDSLANRT 433
Query: 351 L 351
L
Sbjct: 434 L 434
Score = 103 (41.3 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 58/244 (23%), Positives = 93/244 (38%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y +Y + A+
Sbjct: 106 VAAVFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDNFYI--NLYPEYTSISRAI 163
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINSLL 122
D+V +Y W+ V ++ +D G + L A SK KI + P G SR + +
Sbjct: 164 LDIVIFYKWKCVTVVY-EDSTGLMRMQELIKAPSKNNLKIRIRQLPSGGGDSRPLLKEMK 222
Query: 123 VGANLMESRVFVVH-VNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
E +V+ + + S+GM Y + T LD EP
Sbjct: 223 -----KEKEFYVIFDCSYQVAAELLKQLMSMGMMTEYYHFFFTTLDLFALD-LEPYRYSG 276
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRW---KNL---KYKENSPSGF-NSYALYAYDSVWL 234
+N+ A R D + I +W + L K + SG + A YD+V++
Sbjct: 277 VNM----TAFRLLNLDDSYVASVIQKWSMERQLAPPKPESGLMSGIMTTAAALMYDAVFM 332
Query: 235 VAHA 238
VA A
Sbjct: 333 VAVA 336
>MGI|MGI:95816 [details] [associations]
symbol:Grik3 "glutamate receptor, ionotropic, kainate 3"
species:10090 "Mus musculus" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=ISO] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007196 "adenylate
cyclase-inhibiting G-protein coupled glutamate receptor signaling
pathway" evidence=ISO] [GO:0007215 "glutamate receptor signaling
pathway" evidence=ISO] [GO:0007216 "G-protein coupled glutamate
receptor signaling pathway" evidence=ISO] [GO:0008066 "glutamate
receptor activity" evidence=ISO] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030424 "axon"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0032839
"dendrite cytoplasm" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0043195
"terminal bouton" evidence=ISO] [GO:0043204 "perikaryon"
evidence=ISO] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0051967 "negative
regulation of synaptic transmission, glutamatergic" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95816 GO:GO:0005886
GO:GO:0005887 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043204 GO:GO:0043195 GO:GO:0042391 GO:GO:0032839
InterPro:IPR001828 eggNOG:NOG316680 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
OrthoDB:EOG41C6VH GeneTree:ENSGT00590000083056 CTD:2899 KO:K05203
OMA:EEQAFRF GO:GO:0001640 EMBL:AL607090 EMBL:AL627328 EMBL:BC118004
EMBL:AF245444 IPI:IPI00120318 IPI:IPI00986627 RefSeq:NP_001074566.1
UniGene:Mm.40896 ProteinModelPortal:B1AS29 SMR:B1AS29 STRING:B1AS29
PaxDb:B1AS29 PRIDE:B1AS29 DNASU:14807 Ensembl:ENSMUST00000030676
GeneID:14807 KEGG:mmu:14807 UCSC:uc008usa.2 InParanoid:B1AS29
ChiTaRS:GRIK3 NextBio:286987 Bgee:B1AS29 Genevestigator:B1AS29
Uniprot:B1AS29
Length = 919
Score = 176 (67.0 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 62/230 (26%), Positives = 110/230 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+GYCID+ + ++L + + YG +N +V+++ +K D AV +TI
Sbjct: 463 EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTIT 522
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K +DF++P+M G+ ++ S ++FL P + +W+ +L V V+++
Sbjct: 523 HVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582
Query: 516 LEHRFNN-EFRG--P--PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXX 562
+ RF+ E+ P P ++V T+ FWF ++ E +L R
Sbjct: 583 IA-RFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGA 691
Score = 152 (58.6 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 67/292 (22%), Positives = 122/292 (41%)
Query: 486 SPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRG--P--PSQQLV----TI-- 535
S ++FL P + +W+ +L V V++++ E+ P P ++V T+
Sbjct: 553 SVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLN 612
Query: 536 -FWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
FWF ++ E +L R SSYTA+L + LTV+++ S I+
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 594 IDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG---- 647
D L T+ G V+DG+ + ++ E + + AL + + G
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPS---ALVKNNEEGIQRT 729
Query: 648 --GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSE 705
A++ E IE ++++ NC +G G+G SP ++ AILQL E
Sbjct: 730 LTADYALLMESTTIE-YITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQE 788
Query: 706 NGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALI 757
L + KW + C + + S L ++ G+F++ L+++
Sbjct: 789 EDKLHIMKEKWWRGSGCPEEENKE---ASALGIQKIGGIFIVLAAGLVLSVL 837
Score = 114 (45.2 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 74/334 (22%), Positives = 120/334 (35%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VVA GP + + + N L VP + L + Y DY + HA+
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYV--NLYPDYASLSHAI 163
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINSLL 122
DLV+ WR ++ DD G + L A S+ ++ + P SR + +
Sbjct: 164 LDLVQSLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMK 222
Query: 123 VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTM 182
G E R+ + + I A ++GM Y +I T LD EP +
Sbjct: 223 RGR---EFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALD-LEPYRYSGV 277
Query: 183 NLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGFNSYALYAYDSVWL--VAHA 238
NL G L P + +W + L+ + SG + D+ L H
Sbjct: 278 NLT-GFRILNVDNPHVSA---IVEKWAMERLQAAPRAESGLLDGVMMT-DAALLYDAVHI 332
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFD 298
+ + T N + H + F Q+ R+ F SG +R D
Sbjct: 333 VSVCYQRAPQMTV-NSLQCHRHKAWRFGGRFMN-FIKEAQWEGLTGRIVFNKTSG-LRTD 389
Query: 299 ADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D++++ G ++G WS GL++
Sbjct: 390 FD-------LDIISLKEDGLEKVGVWSPADGLNI 416
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 476 VVAPVQKLKSSPWAFLKPFTI-PMWL 500
+ AP ++L+S W + F + W+
Sbjct: 1 MTAPWRRLRSLVWEYWAGFLVCAFWI 26
>TIGR_CMR|SPO_3335 [details] [associations]
symbol:SPO_3335 "glutamine ABC transporter, periplasmic
glutamine-binding protein" species:246200 "Ruegeria pomeroyi DSS-3"
[GO:0006868 "glutamine transport" evidence=ISS] [GO:0015186
"L-glutamine transmembrane transporter activity" evidence=ISS]
[GO:0016597 "amino acid binding" evidence=ISS] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=ISS]
InterPro:IPR001320 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
SMART:SM00062 GO:GO:0016020 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0035235 GO:GO:0030288 GO:GO:0005234 GO:GO:0004970 KO:K02030
RefSeq:YP_168531.1 ProteinModelPortal:Q5LN77 GeneID:3194025
KEGG:sil:SPO3335 PATRIC:23380121 HOGENOM:HOG000123673 OMA:LIWLAER
ProtClustDB:CLSK751639 Uniprot:Q5LN77
Length = 361
Score = 227 (85.0 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 70/295 (23%), Positives = 134/295 (45%)
Query: 429 KRNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPW 488
+R ++D++ V + D A+ +I+I R +DF+QP ESGL ++ P + S
Sbjct: 74 ERKEKFSDMLAAVMDGEADMAIANISITAARETEMDFSQPIFESGLQILVPAETNAGS-- 131
Query: 489 AFLKPF-TIPMWLVTGGFFLFV---GAVVWILEHRFNNEFRGPPSQQLVTIFWFSFSTMF 544
+ L+ + ++L G F+ + G ++W E R F + FW++ + +
Sbjct: 132 SLLRALLSRDLFLAIGAAFVILLTGGMLMWYFERRAQPYFDRKLHEAWFPSFWWALNLVV 191
Query: 545 FSHRENTV--SSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
E V ++ GR S +TA +TS++TV+ ++ + ++ L +
Sbjct: 192 NGGFEERVPRTAFGRLFGVLLVISSLFVVSVFTARITSVMTVEAISGSVNSVNDLYG--Q 249
Query: 603 PIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELF 662
+G DGS A +L + +++E A RG + AIV + P + +
Sbjct: 250 EVGTIDGSTAAGFLTRR----DIDFAAFSDLQEMITAFERG----ALDAIVFDAPILSYY 301
Query: 663 MS-KTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKW 716
S + + T G F + +G AF S +++ A+L L E+G ++++ KW
Sbjct: 302 ASHQGKGKAVTTGAIFLRENYGIAFPTGSARVEEVNQALLALREDGTYEELYRKW 356
>UNIPROTKB|E7EPZ0 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00792601
ProteinModelPortal:E7EPZ0 SMR:E7EPZ0 Ensembl:ENST00000399909
ArrayExpress:E7EPZ0 Bgee:E7EPZ0 Uniprot:E7EPZ0
Length = 903
Score = 179 (68.1 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 461 EGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 520
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 521 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 580
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 581 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 640
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 641 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 700
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL R G + + Y L M T+ E+ T
Sbjct: 701 TYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YA-LLMESTSIEYVT 746
Score = 162 (62.1 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 608 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 667
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL R G
Sbjct: 668 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGI 725
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 726 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 784
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + + S L +++ G+F++ +A L L F
Sbjct: 785 LQEEGKLHMMKEKWWRGNGCPEEDNKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 838
Query: 763 VCGQF 767
G+F
Sbjct: 839 -IGEF 842
Score = 109 (43.4 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 76/336 (22%), Positives = 126/336 (37%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + A+
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYI--NLYPDYAAISRAI 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 162 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I +GM Y + T LD E +N
Sbjct: 218 EMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 276
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 277 MT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 332
Query: 237 HALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIR 296
A + K +NL +DG L + N T +G +R
Sbjct: 333 IASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDG----LTGHITFNKT--NG-LR 385
Query: 297 FDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D D++++ G+ +IG W++ SGL++
Sbjct: 386 KDFD-------LDIISLKEEGTEKIGIWNSNSGLNM 414
Score = 44 (20.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 470 MESGLVVVAPVQKLKSSPWA------FLKPFTIPMWLVTGGFF 506
ME G ++ P + + WA ++ P T P L GG F
Sbjct: 1 MEHGTLLAQPGLWTRDTSWALLYFLCYILPQTAPQVLRIGGIF 43
>UNIPROTKB|B7Z1W1 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AC010613
EMBL:AC025156 EMBL:AC091960 EMBL:AC091962 UniGene:Hs.519693
UniGene:Hs.737709 HGNC:HGNC:4571 HOVERGEN:HBG051839 EMBL:AK294011
IPI:IPI00956375 SMR:B7Z1W1 STRING:B7Z1W1 Ensembl:ENST00000537037
Uniprot:B7Z1W1
Length = 716
Score = 189 (71.6 bits), Expect = 7.0e-16, Sum P(3) = 7.0e-16
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 387 NEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVA 442
N+F D+ +GYC+++ + Y + G G R+P +N +V ++
Sbjct: 381 NQFEGNDR----YEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELV 436
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLV 501
+ D AV +TI R +++DF++P+M G+ +++ QK K ++FL P +W+
Sbjct: 437 YGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMC 496
Query: 502 TGGFFLFVG-AVVWILEHRFN------NEFR-G---PPSQQ-----LVTIFWFSFSTMFF 545
F ++G +VV L RF+ EF G S Q + WFS
Sbjct: 497 I--VFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 554
Query: 546 SHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
+ + SL GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 555 QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 612
Score = 96 (38.9 bits), Expect = 6.3e-06, Sum P(3) = 6.3e-06
Identities = 42/165 (25%), Positives = 64/165 (38%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 546 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 605
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 606 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 665
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPL 692
G A + E E + C+ VG G+G A + S L
Sbjct: 666 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSAL 710
Score = 85 (35.0 bits), Expect = 7.0e-16, Sum P(3) = 7.0e-16
Identities = 40/162 (24%), Positives = 66/162 (40%)
Query: 198 TD-LKKNFISRWKNLKYKENSPSGFN--SY-ALYAYDSVWLVAHALDALLNEGGKFTFSN 253
TD + + +WKN ++++ + Y + YD V ++A A +L + + S
Sbjct: 213 TDTIPAKIMQQWKNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRRQ--RIDISR 270
Query: 254 DPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLN 312
D L++ V G G + L ++ F GL+G ++F+ N V+
Sbjct: 271 RGNAGDC------LANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIE 324
Query: 313 IGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSV 354
+ G R+IGYW N V A NSS Y V
Sbjct: 325 MKHDGIRKIGYW-NEDDKFVPAATDAQAGGDNSSVQNRTYIV 365
Score = 55 (24.4 bits), Expect = 7.0e-16, Sum P(3) = 7.0e-16
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P TS Q+ LR D A+ ++++Y W++ + I+ D D G + + + D ++
Sbjct: 68 PVDTSNQFVLQLRPELQD-----ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAE 121
Query: 99 KRAKIS 104
K +++
Sbjct: 122 KNWQVT 127
>UNIPROTKB|E7EPY9 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00790891
ProteinModelPortal:E7EPY9 SMR:E7EPY9 Ensembl:ENST00000399914
ArrayExpress:E7EPY9 Bgee:E7EPY9 Uniprot:E7EPY9
Length = 934
Score = 179 (68.1 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 461 EGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 520
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 521 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 580
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 581 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 640
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 641 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 700
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL R G + + Y L M T+ E+ T
Sbjct: 701 TYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YA-LLMESTSIEYVT 746
Score = 162 (62.1 bits), Expect = 5.2e-14, Sum P(2) = 5.2e-14
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 608 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 667
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL R G
Sbjct: 668 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGI 725
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 726 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 784
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + + S L +++ G+F++ +A L L F
Sbjct: 785 LQEEGKLHMMKEKWWRGNGCPEEDNKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 838
Query: 763 VCGQF 767
G+F
Sbjct: 839 -IGEF 842
Score = 109 (43.4 bits), Expect = 7.7e-16, Sum P(2) = 7.7e-16
Identities = 76/336 (22%), Positives = 126/336 (37%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + A+
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYI--NLYPDYAAISRAI 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 162 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I +GM Y + T LD E +N
Sbjct: 218 EMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 276
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 277 MT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 332
Query: 237 HALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIR 296
A + K +NL +DG L + N T +G +R
Sbjct: 333 IASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDG----LTGHITFNKT--NG-LR 385
Query: 297 FDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D D++++ G+ +IG W++ SGL++
Sbjct: 386 KDFD-------LDIISLKEEGTEKIGIWNSNSGLNM 414
Score = 44 (20.5 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 470 MESGLVVVAPVQKLKSSPWA------FLKPFTIPMWLVTGGFF 506
ME G ++ P + + WA ++ P T P L GG F
Sbjct: 1 MEHGTLLAQPGLWTRDTSWALLYFLCYILPQTAPQVLRIGGIF 43
>MGI|MGI:95814 [details] [associations]
symbol:Grik1 "glutamate receptor, ionotropic, kainate 1"
species:10090 "Mus musculus" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0007399
"nervous system development" evidence=ISO] [GO:0008144 "drug
binding" evidence=ISO] [GO:0008328 "ionotropic glutamate receptor
complex" evidence=ISO;IC] [GO:0014054 "positive regulation of
gamma-aminobutyric acid secretion" evidence=IMP] [GO:0015277
"kainate selective glutamate receptor activity"
evidence=ISO;IGI;IDA;IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=ISO] [GO:0022843 "voltage-gated cation
channel activity" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0030534
"adult behavior" evidence=IMP] [GO:0032229 "negative regulation of
synaptic transmission, GABAergic" evidence=ISO] [GO:0032230
"positive regulation of synaptic transmission, GABAergic"
evidence=ISO;IMP] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IPI] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO;IGI;IDA;IMP] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IGI;IMP] [GO:0042391
"regulation of membrane potential" evidence=IDA;IMP] [GO:0042734
"presynaptic membrane" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0043195 "terminal bouton" evidence=ISO]
[GO:0043235 "receptor complex" evidence=ISO] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=TAS] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=ISO;TAS] [GO:0048266 "behavioral
response to pain" evidence=IMP] [GO:0051899 "membrane
depolarization" evidence=IMP] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=ISO;IGI] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IGI;IMP] [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IGI;IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95814 GO:GO:0051967
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0030425
GO:GO:0048266 GO:GO:0060079 GO:GO:0042734 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 GO:GO:0048169
InterPro:IPR001828 GO:GO:0048172 eggNOG:NOG316680 GO:GO:0005234
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:X66118
EMBL:U31444 IPI:IPI00122550 PIR:A41053 UniGene:Mm.5134
ProteinModelPortal:Q60934 SMR:Q60934 STRING:Q60934
PhosphoSite:Q60934 PRIDE:Q60934 UCSC:uc007zuw.2 CleanEx:MM_GRIK1
Genevestigator:Q60934 Uniprot:Q60934
Length = 836
Score = 174 (66.3 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 60/229 (26%), Positives = 106/229 (46%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 461 EGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 520
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 521 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 580
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 581 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 640
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS
Sbjct: 641 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGS 689
Score = 112 (44.5 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 77/336 (22%), Positives = 125/336 (37%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + AV
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNRDLFYI--NLYPDYAAISRAV 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 162 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I +GM Y + T LD E +N
Sbjct: 218 EMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 276
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 277 MT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGVMTTEAALMYDAVYMVA 332
Query: 237 HALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIR 296
A + K +NL +DG L R+ F G +R
Sbjct: 333 IASHRASQLTVSSLQCHRHKPWRLGPRFMNLIKEARWDG----LTG--RITFNKTDG-LR 385
Query: 297 FDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D D++++ G+ +IG W++ SGL++
Sbjct: 386 KDFD-------LDIISLKEEGTEKIGIWNSNSGLNM 414
>UNIPROTKB|F1PDR1 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:AAEX03003077 Ensembl:ENSCAFT00000028234
Uniprot:F1PDR1
Length = 806
Score = 189 (71.6 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 387 NEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVA 442
N+F D+ +GYC+++ + Y + G G R+P +N +V ++
Sbjct: 427 NQFEGNDR----YEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELV 482
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLV 501
+ D AV +TI R +++DF++P+M G+ +++ QK K ++FL P +W+
Sbjct: 483 YGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMC 542
Query: 502 TGGFFLFVG-AVVWILEHRFN------NEFR-G---PPSQQ-----LVTIFWFSFSTMFF 545
F ++G +VV L RF+ EF G S Q + WFS
Sbjct: 543 I--VFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 600
Query: 546 SHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
+ + SL GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 601 QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 658
Score = 154 (59.3 bits), Expect = 7.0e-12, Sum P(3) = 7.0e-12
Identities = 59/213 (27%), Positives = 89/213 (41%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 592 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 651
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 652 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLK 739
L K+ NKW EC + GG S+ S K
Sbjct: 772 LLDKLKNKWWYDKGECG-----SGGGDSKRSRK 799
Score = 85 (35.0 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 40/162 (24%), Positives = 66/162 (40%)
Query: 198 TD-LKKNFISRWKNLKYKENSPSGFN--SY-ALYAYDSVWLVAHALDALLNEGGKFTFSN 253
TD + + +WKN ++++ + Y + YD V ++A A +L + + S
Sbjct: 259 TDTIPAKIMQQWKNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRRQ--RIDISR 316
Query: 254 DPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLN 312
D L++ V G G + L ++ F GL+G ++F+ N V+
Sbjct: 317 RGNAGDC------LANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIE 370
Query: 313 IGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSV 354
+ G R+IGYW N V A NSS Y V
Sbjct: 371 MKHDGIRKIGYW-NEDDKFVPAATDAQAGGDNSSVQNRTYIV 411
Score = 55 (24.4 bits), Expect = 1.2e-15, Sum P(3) = 1.2e-15
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P TS Q+ LR D A+ ++++Y W++ + I+ D D G + + + D ++
Sbjct: 114 PVDTSNQFVLQLRPELQD-----ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAE 167
Query: 99 KRAKIS 104
K +++
Sbjct: 168 KNWQVT 173
>UNIPROTKB|F1M526 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00951061
ProteinModelPortal:F1M526 Ensembl:ENSRNOT00000067570
ArrayExpress:F1M526 Uniprot:F1M526
Length = 832
Score = 175 (66.7 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 70/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 437 EGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 496
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 497 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 556
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 557 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 616
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 617 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 676
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 677 TYEKMWAFMSSRQQS--ALVKNSDEGIQRVLTTD--YA-LLMESTSIEYVT 722
Score = 161 (61.7 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 584 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 643
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 644 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQS--ALVKNSDEGI 701
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 702 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 760
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 761 LQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 814
Query: 763 VCGQF 767
G+F
Sbjct: 815 -IGEF 818
Score = 110 (43.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 81/354 (22%), Positives = 136/354 (38%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ S Y DY + AV
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDSRDLFYI--NLYPDYAAISRAV 122
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P A++ A LL
Sbjct: 123 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPPANKDA-KPLL- 177
Query: 124 GANLMESRVFVV--HVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ +S+ F V + +T I +GM Y + T LD E
Sbjct: 178 -KEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSG 235
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWL 234
+N+ G L P + I +W + L+ +G + A YD+V++
Sbjct: 236 VNMT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYM 291
Query: 235 VAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGE 294
VA A + + T S+ L + + G +F+ + + GL+G
Sbjct: 292 VAIAS----HRASQLTVSS-----------LQCHRHKPWRLGPRFMNLIKEARWDGLTGR 336
Query: 295 IRFDADKNLVNPA-YDVLNIGGTGS---------------RRIGYWSNYSGLSV 332
I F+ L D++++ G+ ++IG W++ SGL++
Sbjct: 337 ITFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGIWNSNSGLNM 390
>RGD|71027 [details] [associations]
symbol:Grik3 "glutamate receptor, ionotropic, kainate 3"
species:10116 "Rattus norvegicus" [GO:0001640 "adenylate cyclase
inhibiting G-protein coupled glutamate receptor activity"
evidence=IEA;ISO] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=ISO;IMP;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0005887
"integral to plasma membrane" evidence=IEA;ISO] [GO:0007196
"adenylate cyclase-inhibiting G-protein coupled glutamate receptor
signaling pathway" evidence=ISO] [GO:0007215 "glutamate receptor
signaling pathway" evidence=ISO] [GO:0007216 "G-protein coupled
glutamate receptor signaling pathway" evidence=ISO] [GO:0007268
"synaptic transmission" evidence=NAS] [GO:0008066 "glutamate
receptor activity" evidence=IDA] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=IEA;ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=IDA] [GO:0032839 "dendrite cytoplasm" evidence=IDA]
[GO:0035235 "ionotropic glutamate receptor signaling pathway"
evidence=ISO;IMP;IDA] [GO:0042391 "regulation of membrane potential"
evidence=ISO;IDA] [GO:0043195 "terminal bouton" evidence=IDA]
[GO:0043204 "perikaryon" evidence=IDA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331
Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195
GO:GO:0042391 GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 OrthoDB:EOG41C6VH CTD:2899 KO:K05203 GO:GO:0001640
EMBL:Z11716 EMBL:M83552 IPI:IPI00230977 IPI:IPI00231277 PIR:I53474
PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2 UniGene:Rn.92477
PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94 PDB:4E0W PDB:4G8N
PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93 PDBsum:3U94
PDBsum:4E0W PDBsum:4G8N ProteinModelPortal:P42264 SMR:P42264
STRING:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521
UCSC:RGD:71027 InParanoid:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744
NextBio:643848 ArrayExpress:P42264 Genevestigator:P42264
GermOnline:ENSRNOG00000008992 Uniprot:P42264
Length = 919
Score = 176 (67.0 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 62/230 (26%), Positives = 110/230 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+GYCID+ + ++L + + YG +N +V+++ +K D AV +TI
Sbjct: 463 EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTIT 522
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K +DF++P+M G+ ++ S ++FL P + +W+ +L V V+++
Sbjct: 523 HVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582
Query: 516 LEHRFNN-EFRG--P--PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXX 562
+ RF+ E+ P P ++V T+ FWF ++ E +L R
Sbjct: 583 IA-RFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGA 691
Score = 152 (58.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 67/292 (22%), Positives = 122/292 (41%)
Query: 486 SPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRG--P--PSQQLV----TI-- 535
S ++FL P + +W+ +L V V++++ E+ P P ++V T+
Sbjct: 553 SVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLN 612
Query: 536 -FWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
FWF ++ E +L R SSYTA+L + LTV+++ S I+
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 594 IDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG---- 647
D L T+ G V+DG+ + ++ E + + AL + + G
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPS---ALVKNNEEGIQRT 729
Query: 648 --GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSE 705
A++ E IE ++++ NC +G G+G SP ++ AILQL E
Sbjct: 730 LTADYALLMESTTIE-YITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQE 788
Query: 706 NGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALI 757
L + KW + C + + S L ++ G+F++ L+++
Sbjct: 789 EDKLHIMKEKWWRGSGCPEEENKE---ASALGIQKIGGIFIVLAAGLVLSVL 837
Score = 110 (43.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 73/334 (21%), Positives = 119/334 (35%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VVA GP + + + N L VP + L + Y DY + HA+
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYV--NLYPDYASLSHAI 163
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINSLL 122
DLV+ WR ++ DD G + L A S+ ++ + P SR + +
Sbjct: 164 LDLVQSLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMK 222
Query: 123 VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTM 182
G E R+ + + I A ++GM Y +I T LD EP +
Sbjct: 223 RGR---EFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALD-LEPYRYSGV 277
Query: 183 NLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGFNSYALYAYDSVWL--VAHA 238
NL R D + +W + L+ + SG + D+ L H
Sbjct: 278 NL----TGFRILNVDNAHVSAIVEKWSMERLQAAPRAESGLLDGVMMT-DAALLYDAVHI 332
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFD 298
+ + T N + H + F Q+ R+ F SG +R D
Sbjct: 333 VSVCYQRASQMTV-NSLQCHRHKPWRFGGRFMN-FIKEAQWEGLTGRIVFNKTSG-LRTD 389
Query: 299 ADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D++++ G ++G WS GL++
Sbjct: 390 FD-------LDIISLKEDGLEKVGVWSPADGLNI 416
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 476 VVAPVQKLKSSPWAFLKPFTI-PMWL 500
+ AP ++L+S W + F + W+
Sbjct: 1 MTAPWRRLRSLVWEYWAGFLVCAFWI 26
>UNIPROTKB|P42264 [details] [associations]
symbol:Grik3 "Glutamate receptor ionotropic, kainate 3"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 EMBL:AF027331
Pfam:PF01094 RGD:71027 GO:GO:0005887 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0043195
GO:GO:0042391 GO:GO:0032839 InterPro:IPR001828 eggNOG:NOG316680
GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371 HOVERGEN:HBG051839
GO:GO:0015277 OrthoDB:EOG41C6VH CTD:2899 KO:K05203 GO:GO:0001640
EMBL:Z11716 EMBL:M83552 IPI:IPI00230977 IPI:IPI00231277 PIR:I53474
PIR:S19810 RefSeq:NP_001106187.1 RefSeq:NP_852038.2
UniGene:Rn.92477 PDB:3OLZ PDB:3S9E PDB:3U92 PDB:3U93 PDB:3U94
PDB:4E0W PDB:4G8N PDBsum:3OLZ PDBsum:3S9E PDBsum:3U92 PDBsum:3U93
PDBsum:3U94 PDBsum:4E0W PDBsum:4G8N ProteinModelPortal:P42264
SMR:P42264 STRING:P42264 PRIDE:P42264 GeneID:298521 KEGG:rno:298521
UCSC:RGD:71027 InParanoid:P42264 BindingDB:P42264 ChEMBL:CHEMBL3744
NextBio:643848 ArrayExpress:P42264 Genevestigator:P42264
GermOnline:ENSRNOG00000008992 Uniprot:P42264
Length = 919
Score = 176 (67.0 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 62/230 (26%), Positives = 110/230 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+GYCID+ + ++L + + YG +N +V+++ +K D AV +TI
Sbjct: 463 EGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTIT 522
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K +DF++P+M G+ ++ S ++FL P + +W+ +L V V+++
Sbjct: 523 HVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFV 582
Query: 516 LEHRFNN-EFRG--P--PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXX 562
+ RF+ E+ P P ++V T+ FWF ++ E +L R
Sbjct: 583 IA-RFSPYEWYDAHPCNPGSEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGI 641
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 642 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGA 691
Score = 152 (58.6 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 67/292 (22%), Positives = 122/292 (41%)
Query: 486 SPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRG--P--PSQQLV----TI-- 535
S ++FL P + +W+ +L V V++++ E+ P P ++V T+
Sbjct: 553 SVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFTLLN 612
Query: 536 -FWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
FWF ++ E +L R SSYTA+L + LTV+++ S I+
Sbjct: 613 SFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 672
Query: 594 IDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG---- 647
D L T+ G V+DG+ + ++ E + + AL + + G
Sbjct: 673 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPS---ALVKNNEEGIQRT 729
Query: 648 --GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSE 705
A++ E IE ++++ NC +G G+G SP ++ AILQL E
Sbjct: 730 LTADYALLMESTTIE-YITQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQE 788
Query: 706 NGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALI 757
L + KW + C + + S L ++ G+F++ L+++
Sbjct: 789 EDKLHIMKEKWWRGSGCPEEENKE---ASALGIQKIGGIFIVLAAGLVLSVL 837
Score = 110 (43.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 73/334 (21%), Positives = 119/334 (35%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VVA GP + + + N L VP + L + Y DY + HA+
Sbjct: 106 VVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYV--NLYPDYASLSHAI 163
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINSLL 122
DLV+ WR ++ DD G + L A S+ ++ + P SR + +
Sbjct: 164 LDLVQSLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMK 222
Query: 123 VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTM 182
G E R+ + + I A ++GM Y +I T LD EP +
Sbjct: 223 RGR---EFRI-IFDCSHTMAAQILKQAMAMGMMTEYYHFIFTTLDLYALD-LEPYRYSGV 277
Query: 183 NLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGFNSYALYAYDSVWL--VAHA 238
NL R D + +W + L+ + SG + D+ L H
Sbjct: 278 NL----TGFRILNVDNAHVSAIVEKWSMERLQAAPRAESGLLDGVMMT-DAALLYDAVHI 332
Query: 239 LDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFD 298
+ + T N + H + F Q+ R+ F SG +R D
Sbjct: 333 VSVCYQRASQMTV-NSLQCHRHKPWRFGGRFMN-FIKEAQWEGLTGRIVFNKTSG-LRTD 389
Query: 299 ADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
D D++++ G ++G WS GL++
Sbjct: 390 FD-------LDIISLKEDGLEKVGVWSPADGLNI 416
Score = 37 (18.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 476 VVAPVQKLKSSPWAFLKPFTI-PMWL 500
+ AP ++L+S W + F + W+
Sbjct: 1 MTAPWRRLRSLVWEYWAGFLVCAFWI 26
>UNIPROTKB|F1NKF4 [details] [associations]
symbol:GRIA2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0007268 "synaptic transmission" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
GO:GO:0030054 GO:GO:0045211 GO:GO:0030288 GO:GO:0032281
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:AADN02016515 EMBL:AADN02016516 EMBL:AADN02016517
EMBL:AADN02016518 EMBL:AADN02016519 IPI:IPI00823091
Ensembl:ENSGALT00000038836 ArrayExpress:F1NKF4 Uniprot:F1NKF4
Length = 242
Score = 184 (69.8 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 63/201 (31%), Positives = 92/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVK 629
SSYTA+L + LTV+++ S IE + L TE G D GS + ++ + +
Sbjct: 10 SSYTANLAAFLTVERMVSPIESAEDLSKQTEIAYGTLDSGSTKEFFRRSKIAVFDKMWTY 69
Query: 630 LKNMEEYSIA------LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWG 683
+K+ E +AR K G A + E E + C+ VG G+G
Sbjct: 70 MKSAEPSVFVRTTAEGVARVRKSKGKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYG 129
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFW 742
A + S L ++ A+L+LSE G L K+ NKW EC S + S LSL +
Sbjct: 130 IATPKGSSLRTPVNLAVLKLSEQGVLDKLKNKWWYDKGECGAKDSGSKEKTSALSLSNVA 189
Query: 743 GLFLIC----GIACFLALIFF 759
G+F I G+A +ALI F
Sbjct: 190 GVFYILVGGLGLAMLVALIEF 210
Score = 48 (22.0 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N P+ S +
Sbjct: 207 LIEFCYKSRAEAKRMKVAKNAQNINPTSSQN 237
>UNIPROTKB|F1LTY2 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 GeneTree:ENSGT00590000083056
IPI:IPI00231400 Ensembl:ENSRNOT00000042581 ArrayExpress:F1LTY2
Uniprot:F1LTY2
Length = 834
Score = 175 (66.7 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 70/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 439 EGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 498
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 499 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 558
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 559 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 618
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 619 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 678
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 679 TYEKMWAFMSSRQQS--ALVKNSDEGIQRVLTTD--YA-LLMESTSIEYVT 724
Score = 161 (61.7 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 586 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 645
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 646 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQS--ALVKNSDEGI 703
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 704 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 762
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 763 LQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 816
Query: 763 VCGQF 767
G+F
Sbjct: 817 -IGEF 820
Score = 109 (43.4 bits), Expect = 1.5e-15, Sum P(2) = 1.5e-15
Identities = 62/244 (25%), Positives = 95/244 (38%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ S Y DY + AV
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDSRDLFYI--NLYPDYAAISRAV 122
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P A++ A LL
Sbjct: 123 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPPANKDA-KPLL- 177
Query: 124 GANLMESRVFVV--HVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ +S+ F V + +T I +GM Y + T LD E
Sbjct: 178 -KEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSG 235
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWL 234
+N+ G L P + I +W + L+ +G + A YD+V++
Sbjct: 236 VNMT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYM 291
Query: 235 VAHA 238
VA A
Sbjct: 292 VAIA 295
>UNIPROTKB|F1N994 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00572417 Ensembl:ENSGALT00000036429 Uniprot:F1N994
Length = 258
Score = 194 (73.4 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 65/201 (32%), Positives = 93/201 (46%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVK 629
SSYTA+L + LTV+++ S IE + L TE G D GS + ++ + E
Sbjct: 10 SSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTY 69
Query: 630 LKNMEEYSIA------LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWG 683
+K+ E +AR K G A + E E + C+ VG G+G
Sbjct: 70 MKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYG 129
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFW 742
A + SPL ++ A+L+LSE G L K+ NKW EC S + S LSL +
Sbjct: 130 VATPKGSPLRTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVA 189
Query: 743 GLFLIC----GIACFLALIFF 759
G+F I G+A +ALI F
Sbjct: 190 GVFYILVGGLGLAMLVALIEF 210
Score = 37 (18.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +++ P+ S +
Sbjct: 207 LIEFCYKSRAEAKRMKVAKSAQTFNPTSSQN 237
>UNIPROTKB|F1M4T4 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00947926
ProteinModelPortal:F1M4T4 Ensembl:ENSRNOT00000065613
ArrayExpress:F1M4T4 Uniprot:F1M4T4
Length = 883
Score = 175 (66.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 70/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 439 EGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 498
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 499 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 558
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 559 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 618
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 619 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 678
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 679 TYEKMWAFMSSRQQS--ALVKNSDEGIQRVLTTD--YA-LLMESTSIEYVT 724
Score = 161 (61.7 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 586 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 645
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 646 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQS--ALVKNSDEGI 703
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 704 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 762
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 763 LQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 816
Query: 763 VCGQF 767
G+F
Sbjct: 817 -IGEF 820
Score = 109 (43.4 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 62/244 (25%), Positives = 95/244 (38%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ S Y DY + AV
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDSRDLFYI--NLYPDYAAISRAV 122
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P A++ A LL
Sbjct: 123 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPPANKDA-KPLL- 177
Query: 124 GANLMESRVFVV--HVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ +S+ F V + +T I +GM Y + T LD E
Sbjct: 178 -KEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSG 235
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWL 234
+N+ G L P + I +W + L+ +G + A YD+V++
Sbjct: 236 VNMT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYM 291
Query: 235 VAHA 238
VA A
Sbjct: 292 VAIA 295
>UNIPROTKB|F1PDP9 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 CTD:2890 KO:K05197 OMA:ARIMQQW EMBL:AAEX03003077
RefSeq:XP_853398.1 ProteinModelPortal:F1PDP9
Ensembl:ENSCAFT00000028256 GeneID:489168 KEGG:cfa:489168
Uniprot:F1PDP9
Length = 906
Score = 189 (71.6 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 387 NEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVA 442
N+F D+ +GYC+++ + Y + G G R+P +N +V ++
Sbjct: 427 NQFEGNDR----YEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELV 482
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLV 501
+ D AV +TI R +++DF++P+M G+ +++ QK K ++FL P +W+
Sbjct: 483 YGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMC 542
Query: 502 TGGFFLFVG-AVVWILEHRFN------NEFR-G---PPSQQ-----LVTIFWFSFSTMFF 545
F ++G +VV L RF+ EF G S Q + WFS
Sbjct: 543 I--VFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 600
Query: 546 SHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
+ + SL GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 601 QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 658
Score = 176 (67.0 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 592 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 651
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 652 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 772 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEF 828
Score = 85 (35.0 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 40/162 (24%), Positives = 66/162 (40%)
Query: 198 TD-LKKNFISRWKNLKYKENSPSGFN--SY-ALYAYDSVWLVAHALDALLNEGGKFTFSN 253
TD + + +WKN ++++ + Y + YD V ++A A +L + + S
Sbjct: 259 TDTIPAKIMQQWKNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRRQ--RIDISR 316
Query: 254 DPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLN 312
D L++ V G G + L ++ F GL+G ++F+ N V+
Sbjct: 317 RGNAGDC------LANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIE 370
Query: 313 IGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSV 354
+ G R+IGYW N V A NSS Y V
Sbjct: 371 MKHDGIRKIGYW-NEDDKFVPAATDAQAGGDNSSVQNRTYIV 411
Score = 55 (24.4 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P TS Q+ LR D A+ ++++Y W++ + I+ D D G + + + D ++
Sbjct: 114 PVDTSNQFVLQLRPELQD-----ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAE 167
Query: 99 KRAKIS 104
K +++
Sbjct: 168 KNWQVT 173
>UNIPROTKB|P42261 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0007616 "long-term memory" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0032590 "dendrite membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0030425 "dendrite"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IDA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0008066 "glutamate
receptor activity" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS] [GO:0030666
"endocytic vesicle membrane" evidence=TAS] [GO:0009986 "cell
surface" evidence=ISS] [GO:0043025 "neuronal cell body"
evidence=ISS] [GO:0044309 "neuron spine" evidence=ISS] [GO:0030165
"PDZ domain binding" evidence=ISS] Reactome:REACT_13685
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0014069 GO:GO:0009986 EMBL:CH471062 GO:GO:0005789
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0007616 DrugBank:DB00142 GO:GO:0030288
GO:GO:0032281 GO:GO:0031623 GO:GO:0030165 GO:GO:0032590
DrugBank:DB01159 InterPro:IPR001828 DrugBank:DB01189
DrugBank:DB00228 DrugBank:DB00753 DrugBank:DB01028 DrugBank:DB01236
GO:GO:0030666 Pathway_Interaction_DB:ephbfwdpathway
eggNOG:NOG316680 GO:GO:0004971 GO:GO:0005234 GO:GO:0004970
HOGENOM:HOG000234372 EMBL:M64752 EMBL:X58633 EMBL:M81886
EMBL:AK295039 EMBL:AK295827 EMBL:AC010613 EMBL:AC025156
EMBL:AC091960 EMBL:AC091962 EMBL:BC111734 IPI:IPI00030880
IPI:IPI00219124 PIR:A40222 PIR:A41273 PIR:S25852 PIR:S38723
RefSeq:NP_000818.2 RefSeq:NP_001107655.1 RefSeq:NP_001244948.1
RefSeq:NP_001244950.1 RefSeq:NP_001244952.1 UniGene:Hs.519693
UniGene:Hs.737709 ProteinModelPortal:P42261 SMR:P42261
DIP:DIP-41487N MINT:MINT-271172 STRING:P42261 PhosphoSite:P42261
DMDM:116242505 PaxDb:P42261 PRIDE:P42261 Ensembl:ENST00000285900
Ensembl:ENST00000340592 Ensembl:ENST00000518142
Ensembl:ENST00000544403 Ensembl:ENST00000544794 GeneID:2890
KEGG:hsa:2890 UCSC:uc003luy.4 UCSC:uc003lva.4 CTD:2890
GeneCards:GC05P152850 H-InvDB:HIX0032120 HGNC:HGNC:4571
HPA:CAB001965 MIM:138248 neXtProt:NX_P42261 PharmGKB:PA28966
HOVERGEN:HBG051839 KO:K05197 OrthoDB:EOG479F6B PhylomeDB:P42261
BindingDB:P42261 ChEMBL:CHEMBL2009 GenomeRNAi:2890 NextBio:11425
ArrayExpress:P42261 Bgee:P42261 CleanEx:HS_GRIA1
Genevestigator:P42261 GermOnline:ENSG00000155511 GO:GO:0015277
Uniprot:P42261
Length = 906
Score = 189 (71.6 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 387 NEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVA 442
N+F D+ +GYC+++ + Y + G G R+P +N +V ++
Sbjct: 427 NQFEGNDR----YEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELV 482
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLV 501
+ D AV +TI R +++DF++P+M G+ +++ QK K ++FL P +W+
Sbjct: 483 YGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMC 542
Query: 502 TGGFFLFVG-AVVWILEHRFN------NEFR-G---PPSQQ-----LVTIFWFSFSTMFF 545
F ++G +VV L RF+ EF G S Q + WFS
Sbjct: 543 I--VFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 600
Query: 546 SHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
+ + SL GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 601 QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 658
Score = 176 (67.0 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 592 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 651
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 652 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 772 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEF 828
Score = 85 (35.0 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 40/162 (24%), Positives = 66/162 (40%)
Query: 198 TD-LKKNFISRWKNLKYKENSPSGFN--SY-ALYAYDSVWLVAHALDALLNEGGKFTFSN 253
TD + + +WKN ++++ + Y + YD V ++A A +L + + S
Sbjct: 259 TDTIPAKIMQQWKNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRRQ--RIDISR 316
Query: 254 DPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLN 312
D L++ V G G + L ++ F GL+G ++F+ N V+
Sbjct: 317 RGNAGDC------LANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIE 370
Query: 313 IGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSV 354
+ G R+IGYW N V A NSS Y V
Sbjct: 371 MKHDGIRKIGYW-NEDDKFVPAATDAQAGGDNSSVQNRTYIV 411
Score = 55 (24.4 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P TS Q+ LR D A+ ++++Y W++ + I+ D D G + + + D ++
Sbjct: 114 PVDTSNQFVLQLRPELQD-----ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAE 167
Query: 99 KRAKIS 104
K +++
Sbjct: 168 KNWQVT 173
>UNIPROTKB|Q38PU8 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9541 "Macaca
fascicularis" [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISS] [GO:0014069
"postsynaptic density" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISS] [GO:0043197 "dendritic
spine" evidence=ISS] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0014069 GO:GO:0005789 GO:GO:0030054 GO:GO:0045211
GO:GO:0030288 GO:GO:0032281 InterPro:IPR001828 GO:GO:0004971
GO:GO:0005234 HOVERGEN:HBG051839 EMBL:DQ159929 HSSP:P19491
ProteinModelPortal:Q38PU8 SMR:Q38PU8 Uniprot:Q38PU8
Length = 906
Score = 189 (71.6 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 387 NEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVA 442
N+F D+ +GYC+++ + Y + G G R+P +N +V ++
Sbjct: 427 NQFEGNDR----YEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELV 482
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLV 501
+ D AV +TI R +++DF++P+M G+ +++ QK K ++FL P +W+
Sbjct: 483 YGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMC 542
Query: 502 TGGFFLFVG-AVVWILEHRFN------NEFR-G---PPSQQ-----LVTIFWFSFSTMFF 545
F ++G +VV L RF+ EF G S Q + WFS
Sbjct: 543 I--VFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 600
Query: 546 SHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
+ + SL GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 601 QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 658
Score = 176 (67.0 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 592 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 651
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 652 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 772 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEF 828
Score = 85 (35.0 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 40/162 (24%), Positives = 66/162 (40%)
Query: 198 TD-LKKNFISRWKNLKYKENSPSGFN--SY-ALYAYDSVWLVAHALDALLNEGGKFTFSN 253
TD + + +WKN ++++ + Y + YD V ++A A +L + + S
Sbjct: 259 TDTIPAKIMQQWKNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRRQ--RIDISR 316
Query: 254 DPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLN 312
D L++ V G G + L ++ F GL+G ++F+ N V+
Sbjct: 317 RGNAGDC------LANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIE 370
Query: 313 IGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSV 354
+ G R+IGYW N V A NSS Y V
Sbjct: 371 MKHDGIRKIGYW-NEDDKFVPAATDAQAGGDNSSVQNRTYIV 411
Score = 55 (24.4 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P TS Q+ LR D A+ ++++Y W++ + I+ D D G + + + D ++
Sbjct: 114 PVDTSNQFVLQLRPELQD-----ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAE 167
Query: 99 KRAKIS 104
K +++
Sbjct: 168 KNWQVT 173
>UNIPROTKB|F1M5R4 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 IPI:IPI00951831
Ensembl:ENSRNOT00000066006 ArrayExpress:F1M5R4 Uniprot:F1M5R4
Length = 912
Score = 175 (66.7 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 70/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 439 EGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 498
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 499 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 558
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 559 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 618
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 619 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 678
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 679 TYEKMWAFMSSRQQS--ALVKNSDEGIQRVLTTD--YA-LLMESTSIEYVT 724
Score = 161 (61.7 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 586 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 645
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 646 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQS--ALVKNSDEGI 703
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 704 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 762
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 763 LQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 816
Query: 763 VCGQF 767
G+F
Sbjct: 817 -IGEF 820
Score = 109 (43.4 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 62/244 (25%), Positives = 95/244 (38%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ S Y DY + AV
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDSRDLFYI--NLYPDYAAISRAV 122
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P A++ A LL
Sbjct: 123 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPPANKDA-KPLL- 177
Query: 124 GANLMESRVFVV--HVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ +S+ F V + +T I +GM Y + T LD E
Sbjct: 178 -KEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSG 235
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWL 234
+N+ G L P + I +W + L+ +G + A YD+V++
Sbjct: 236 VNMT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYM 291
Query: 235 VAHA 238
VA A
Sbjct: 292 VAIA 295
>UNIPROTKB|B7Z9G9 [details] [associations]
symbol:GRIA1 "cDNA, FLJ78833, highly similar to Glutamate
receptor 1" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 EMBL:AC010613 EMBL:AC025156
EMBL:AC091960 EMBL:AC091962 RefSeq:NP_001244950.1 UniGene:Hs.519693
UniGene:Hs.737709 GeneID:2890 KEGG:hsa:2890 CTD:2890 HGNC:HGNC:4571
HOVERGEN:HBG051839 KO:K05197 EMBL:AK315934 IPI:IPI00978580
RefSeq:NP_001244951.1 SMR:B7Z9G9 STRING:B7Z9G9
Ensembl:ENST00000448073 UCSC:uc011dcy.2 Uniprot:B7Z9G9
Length = 916
Score = 189 (71.6 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 387 NEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVA 442
N+F D+ +GYC+++ + Y + G G R+P +N +V ++
Sbjct: 437 NQFEGNDR----YEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELV 492
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLV 501
+ D AV +TI R +++DF++P+M G+ +++ QK K ++FL P +W+
Sbjct: 493 YGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMC 552
Query: 502 TGGFFLFVG-AVVWILEHRFN------NEFR-G---PPSQQ-----LVTIFWFSFSTMFF 545
F ++G +VV L RF+ EF G S Q + WFS
Sbjct: 553 I--VFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 610
Query: 546 SHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
+ + SL GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 611 QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 668
Score = 177 (67.4 bits), Expect = 3.9e-14, Sum P(3) = 3.9e-14
Identities = 68/237 (28%), Positives = 101/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 602 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 661
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 662 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 721
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+LSE G
Sbjct: 722 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQG 781
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ +KW EC S + S LSL + G+F I G+A +ALI F
Sbjct: 782 VLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEF 838
Score = 85 (35.0 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 40/162 (24%), Positives = 66/162 (40%)
Query: 198 TD-LKKNFISRWKNLKYKENSPSGFN--SY-ALYAYDSVWLVAHALDALLNEGGKFTFSN 253
TD + + +WKN ++++ + Y + YD V ++A A +L + + S
Sbjct: 269 TDTIPAKIMQQWKNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRRQ--RIDISR 326
Query: 254 DPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLN 312
D L++ V G G + L ++ F GL+G ++F+ N V+
Sbjct: 327 RGNAGDC------LANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIE 380
Query: 313 IGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSV 354
+ G R+IGYW N V A NSS Y V
Sbjct: 381 MKHDGIRKIGYW-NEDDKFVPAATDAQAGGDNSSVQNRTYIV 421
Score = 55 (24.4 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P TS Q+ LR D A+ ++++Y W++ + I+ D D G + + + D ++
Sbjct: 124 PVDTSNQFVLQLRPELQD-----ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAE 177
Query: 99 KRAKIS 104
K +++
Sbjct: 178 KNWQVT 183
>UNIPROTKB|E7ESV8 [details] [associations]
symbol:GRIA1 "Glutamate receptor 1" species:9606 "Homo
sapiens" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 EMBL:AC010613 EMBL:AC025156 EMBL:AC091960
EMBL:AC091962 RefSeq:NP_001244950.1 UniGene:Hs.519693
UniGene:Hs.737709 GeneID:2890 KEGG:hsa:2890 CTD:2890 HGNC:HGNC:4571
KO:K05197 OMA:ARIMQQW IPI:IPI00978580 ProteinModelPortal:E7ESV8
SMR:E7ESV8 Ensembl:ENST00000518783 UCSC:uc011dcz.2
ArrayExpress:E7ESV8 Bgee:E7ESV8 Uniprot:E7ESV8
Length = 916
Score = 189 (71.6 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 387 NEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVA 442
N+F D+ +GYC+++ + Y + G G R+P +N +V ++
Sbjct: 437 NQFEGNDR----YEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELV 492
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLV 501
+ D AV +TI R +++DF++P+M G+ +++ QK K ++FL P +W+
Sbjct: 493 YGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMC 552
Query: 502 TGGFFLFVG-AVVWILEHRFN------NEFR-G---PPSQQ-----LVTIFWFSFSTMFF 545
F ++G +VV L RF+ EF G S Q + WFS
Sbjct: 553 I--VFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 610
Query: 546 SHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
+ + SL GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 611 QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 668
Score = 176 (67.0 bits), Expect = 5.0e-14, Sum P(3) = 5.0e-14
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 602 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 661
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 662 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 721
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 722 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 781
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 782 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEF 838
Score = 85 (35.0 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 40/162 (24%), Positives = 66/162 (40%)
Query: 198 TD-LKKNFISRWKNLKYKENSPSGFN--SY-ALYAYDSVWLVAHALDALLNEGGKFTFSN 253
TD + + +WKN ++++ + Y + YD V ++A A +L + + S
Sbjct: 269 TDTIPAKIMQQWKNSDARDHTRVDWKRPKYTSALTYDGVKVMAEAFQSLRRQ--RIDISR 326
Query: 254 DPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLN 312
D L++ V G G + L ++ F GL+G ++F+ N V+
Sbjct: 327 RGNAGDC------LANPAVPWGQGIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIE 380
Query: 313 IGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSV 354
+ G R+IGYW N V A NSS Y V
Sbjct: 381 MKHDGIRKIGYW-NEDDKFVPAATDAQAGGDNSSVQNRTYIV 421
Score = 55 (24.4 bits), Expect = 2.0e-15, Sum P(3) = 2.0e-15
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P TS Q+ LR D A+ ++++Y W++ + I+ D D G + + + D ++
Sbjct: 124 PVDTSNQFVLQLRPELQD-----ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAE 177
Query: 99 KRAKIS 104
K +++
Sbjct: 178 KNWQVT 183
>UNIPROTKB|F1RGG3 [details] [associations]
symbol:LOC100737141 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:FP015926 EMBL:FP102936 Ensembl:ENSSSCT00000003376 OMA:THIRICQ
Uniprot:F1RGG3
Length = 558
Score = 155 (59.6 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 52/199 (26%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ +E D L T G + + R+
Sbjct: 211 SSYTANLAAFLTVQRMEVPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNY 270
Query: 631 KNMEEYSIALARGPKGGGVAAIVDELP--YIELFMS----KTNCEFRTVGQEFTKSGWGF 684
++ S+ + +G +A +++ +E M+ + NC +G G+G
Sbjct: 271 MQSKQPSVFVKSTEEG--IARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGI 328
Query: 685 AFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGL 744
SP +++ AILQL EN L+ + KW C + D L +++ G+
Sbjct: 329 GMPLGSPFRDEITLAILQLQENNRLEILKRKWWEGGRCPKE---EDHRAKGLGMENIGGI 385
Query: 745 F--LICG--IACFLALIFF 759
F LICG IA F+A++ F
Sbjct: 386 FVVLICGLIIAVFVAVMEF 404
Score = 129 (50.5 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQ-VALNKFDAAVGDITI 455
+G+C+D+ LL + + +YG + N + +V + + K D AV TI
Sbjct: 21 EGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQKADLAVAAFTI 80
Query: 456 VTNRTKLVDFTQPYMESGLVVVAPVQK-LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ V K ++FL PF+ +WL +L V V++
Sbjct: 81 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLF 140
Query: 515 ILEHRFNNEFRGP 527
+ E+ P
Sbjct: 141 LAARLSPYEWYNP 153
Score = 38 (18.4 bits), Expect = 2.1e-15, Sum P(3) = 2.1e-15
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 285 RMNFTGLSGEIRFD 298
R NF LSG RF+
Sbjct: 8 RPNFQALSGNERFE 21
>UNIPROTKB|F1M7M9 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0014054 "positive regulation of gamma-aminobutyric acid
secretion" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=IEA] [GO:0030534
"adult behavior" evidence=IEA] [GO:0032230 "positive regulation of
synaptic transmission, GABAergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732
GO:GO:0051967 GO:GO:0014054 GO:GO:0030054 GO:GO:0045211
GO:GO:0030425 GO:GO:0048266 GO:GO:0035235 GO:GO:0060079
GO:GO:0042734 GO:GO:0032230 GO:GO:0060080 GO:GO:0035249
GO:GO:0030534 InterPro:IPR001828 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 IPI:IPI00231402 GeneTree:ENSGT00590000083056
OMA:KELIDHR ProteinModelPortal:F1M7M9 Ensembl:ENSRNOT00000050073
ArrayExpress:F1M7M9 Uniprot:F1M7M9
Length = 951
Score = 175 (66.7 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 70/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 478 EGYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 537
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 538 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 597
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 598 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 657
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 658 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 717
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 718 TYEKMWAFMSSRQQS--ALVKNSDEGIQRVLTTD--YA-LLMESTSIEYVT 763
Score = 161 (61.7 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 625 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 684
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 685 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQS--ALVKNSDEGI 742
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 743 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 801
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 802 LQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 855
Query: 763 VCGQF 767
G+F
Sbjct: 856 -IGEF 859
Score = 109 (43.4 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 62/244 (25%), Positives = 95/244 (38%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ S Y DY + AV
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDSRDLFYI--NLYPDYAAISRAV 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P A++ A LL
Sbjct: 162 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPPANKDA-KPLL- 216
Query: 124 GANLMESRVFVV--HVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ +S+ F V + +T I +GM Y + T LD E
Sbjct: 217 -KEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSG 274
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWL 234
+N+ G L P + I +W + L+ +G + A YD+V++
Sbjct: 275 VNMT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYM 330
Query: 235 VAHA 238
VA A
Sbjct: 331 VAIA 334
>ZFIN|ZDB-GENE-070821-5 [details] [associations]
symbol:grik4 "glutamate receptor, ionotropic, kainate
4" species:7955 "Danio rerio" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 ZFIN:ZDB-GENE-070821-5 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GeneTree:ENSGT00590000082809 GO:GO:0005234
GO:GO:0004970 EMBL:BX571886 EMBL:BX572079 EMBL:CR626883
EMBL:CU104717 IPI:IPI00505029 Ensembl:ENSDART00000035812
Uniprot:E7F1P4
Length = 965
Score = 179 (68.1 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 74/320 (23%), Positives = 135/320 (42%)
Query: 383 RVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQ 439
R ++ E D+ +G+C+D+ + ++L + + +YG N + +V
Sbjct: 432 RANHQELEGNDR----YEGFCVDMLKELADILKFKYRIRLVGDGVYGVPGANGTWTGMVG 487
Query: 440 QVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSP--WAFLKPFTIP 497
++ K D AV +TI R K++DF++P+M G+ ++ V + P ++FL PF+
Sbjct: 488 ELISRKADLAVAALTITAEREKVIDFSKPFMTLGISIMYRVH-IGRRPGYFSFLDPFSPG 546
Query: 498 MWLVTGGFFLFVGAVVWILEHRFNNEFRGP-P-----------SQQLVTIFWFSFSTMFF 545
+WL +L V V++++ E+ P P L FWF F
Sbjct: 547 VWLFMLLAYLAVSCVLFLVARLTPYEWYNPHPCLKGRCSLLINQYSLGNSFWFPVGG--F 604
Query: 546 SHRENTVS--SLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
+ +T++ +L R SSYTA+L + LTVQ++ IE +D L T
Sbjct: 605 MQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESVDDLADQTA 664
Query: 603 -PIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIEL 661
G G + + R+ ++ S+ + +G +A +++ Y L
Sbjct: 665 IEYGTMHGGSTMTFFQNSRYQTYQRMWNFMYSKQPSVFVKSTEEG--IARVLNS-NYAYL 721
Query: 662 FMSKTNCEFRTVGQEFTKSG 681
S N +R T+ G
Sbjct: 722 LESTMNEYYRQRNCNLTQIG 741
Score = 148 (57.2 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
SSYTA+L + LTVQ++ IE +D L T G G + + R+
Sbjct: 634 SSYTANLAAFLTVQRMEVPIESVDDLADQTAIEYGTMHGGSTMTFFQNSRYQTYQRMWNF 693
Query: 631 KNMEEYSIALARGPKGGGVAAIVDE-LPYI-ELFMSK----TNCEFRTVGQEFTKSGWGF 684
++ S+ + +G +A +++ Y+ E M++ NC +G G+G
Sbjct: 694 MYSKQPSVFVKSTEEG--IARVLNSNYAYLLESTMNEYYRQRNCNLTQIGGLLDTKGYGI 751
Query: 685 AFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGL 744
S + AIL+L E L+ + KW +C + D L +++ G+
Sbjct: 752 GMPLGSVYRDEFDLAILRLQEENRLEILKRKWWDGGKCPKE---EDHRAKGLGMENIGGI 808
Query: 745 F--LICG--IACFLALIFF 759
F L+CG +A F+A++ F
Sbjct: 809 FVVLVCGLLVAIFMAVLEF 827
Score = 105 (42.0 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 47/205 (22%), Positives = 84/205 (40%)
Query: 129 ESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGV 188
++ +V N I A LGM + Y +I T S+L + D +N++
Sbjct: 211 KTATIIVDANATMSHVILERASELGMLSVYYTYILTSLEFSLLRLDDLAD-QRVNIVGFS 269
Query: 189 VALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALYAYDSVWLVAHALDALLNEGG 247
V R H D + W+ N + + + +S L+ D+V V A+ L
Sbjct: 270 VFNRTHPFFQDFVLSLNRSWQENCDHAPFAGTPLSSALLF--DAVHTVVAAVQEL----- 322
Query: 248 KFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPA 307
N + + + L+ S ++++ G + L + GL+G I F++ N A
Sbjct: 323 -----N--RSQNVGATQLSCKSSKIWEHGTSLMNYLRMVELEGLTGHIEFNSKGQRSNYA 375
Query: 308 YDVLNIGGTGSRRIGYWSNYSGLSV 332
++ G R+IG W + GLS+
Sbjct: 376 LRIMQNSRDGLRQIGQWHSEQGLSM 400
Score = 94 (38.1 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 65/282 (23%), Positives = 109/282 (38%)
Query: 1 MENEVVAAIGPQSSGIAH-VISHVVNELNVPLLSFGATDPTLTSLQYPYF----LRTTQS 55
M VVA +GP +S ++ +IS++ E VP + D + +Q+P F LR T +
Sbjct: 87 MSKGVVAVLGPSASPASNSIISNICGEKEVPYVKVAPED--ILKVQFPRFTTLDLRPTNT 144
Query: 56 DYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASR 115
D AVA L+ ++ I D N +L L K +S + S+
Sbjct: 145 DISM--AVAGLLTFFNSSTSCLICAQADCLLNLEVLLRQFLISKET-LSVRMLDD---SQ 198
Query: 116 SAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTE 175
LL ++ +V N I A LGM + Y +I T S+L +
Sbjct: 199 DP-TPLLKEIRDDKTATIIVDANATMSHVILERASELGMLSVYYTYILTSLEFSLLRLDD 257
Query: 176 PVDIDTMNLLQGVVALRHHTPDTDLKKNFISRWK-NLKYKENSPSGFNSYALY-AYDSVW 233
D +N++ V R H D + W+ N + + + +S L+ A +V
Sbjct: 258 LAD-QRVNIVGFSVFNRTHPFFQDFVLSLNRSWQENCDHAPFAGTPLSSALLFDAVHTVV 316
Query: 234 LVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG 275
L+ N G K+ + S++N + +G
Sbjct: 317 AAVQELNRSQNVGATQLSCKSSKIWEHGTSLMNYLRMVELEG 358
Score = 40 (19.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 88 GISVLGDA-LSKKRAKISYKAPFSPG 112
GIS++ + ++ S+ PFSPG
Sbjct: 521 GISIMYRVHIGRRPGYFSFLDPFSPG 546
>UNIPROTKB|F1N3G8 [details] [associations]
symbol:GRIA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032590
"dendrite membrane" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] [GO:0031623 "receptor
internalization" evidence=IEA] [GO:0014069 "postsynaptic density"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0007616
"long-term memory" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0014069 GO:GO:0009986
GO:GO:0007268 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0035235 GO:GO:0007616 GO:GO:0030288 GO:GO:0032281
GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234 CTD:2890
KO:K05197 OMA:ARIMQQW EMBL:DAAA02020690 EMBL:DAAA02020691
EMBL:DAAA02020692 EMBL:DAAA02020693 EMBL:DAAA02020694
EMBL:DAAA02020695 EMBL:DAAA02020696 EMBL:DAAA02020697
EMBL:DAAA02020698 EMBL:DAAA02020699 EMBL:DAAA02020700
EMBL:DAAA02020701 EMBL:DAAA02020702 IPI:IPI01000809
RefSeq:XP_002704933.2 UniGene:Bt.110838 Ensembl:ENSBTAT00000007628
GeneID:529618 KEGG:bta:529618 Uniprot:F1N3G8
Length = 837
Score = 189 (71.6 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 387 NEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVA 442
N+F D+ +GYC+++ + Y + G G R+P +N +V ++
Sbjct: 358 NQFEGNDR----YEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELV 413
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLV 501
+ D AV +TI R +++DF++P+M G+ +++ QK K ++FL P +W+
Sbjct: 414 YGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMC 473
Query: 502 TGGFFLFVG-AVVWILEHRFN------NEFR-G---PPSQQ-----LVTIFWFSFSTMFF 545
F ++G +VV L RF+ EF G S Q + WFS
Sbjct: 474 I--VFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 531
Query: 546 SHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
+ + SL GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 532 QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 589
Score = 176 (67.0 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 523 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 582
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 583 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 642
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 643 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 702
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 703 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEF 759
Score = 91 (37.1 bits), Expect = 3.5e-15, Sum P(2) = 3.5e-15
Identities = 62/300 (20%), Positives = 117/300 (39%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSL 121
A+ ++++Y W++ + I+ D D G + + + D ++K +++ + + L
Sbjct: 63 ALISIIDHYKWQKFVYIY-DADRGLSVLQKVLDTAAEKNWQVTAVNILT--TTEEGYRML 119
Query: 122 LVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ R+ VV + I L Y +I + +D +D++
Sbjct: 120 FQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILANL--GFMD----IDLNK 173
Query: 182 MNLLQGVVA---LRHHTPDTDLKKNFISRWKNLKYKENSPSGFN--SY-ALYAYDSVWLV 235
V L ++T DT + + +WKN ++++ + Y + YD V ++
Sbjct: 174 FKESGANVTGFQLVNYT-DT-IPAKIMQQWKNSDARDHTRVDWKRPKYTSALTYDGVKVM 231
Query: 236 AHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDG-GQQFLQTLLRMNFTGLSGE 294
A A L + + S D L++ V G G + L ++ F GL+G
Sbjct: 232 AEAFQNLRRQ--RIDISRRGNAGDC------LANPAVPWGQGIDIQRALQQVRFEGLTGN 283
Query: 295 IRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSV 354
++F+ N V+ + G R+IGYW N V A NSS Y V
Sbjct: 284 VQFNEKGRRTNYTLHVIEMKHDGIRKIGYW-NEDDKFVPAATDAQAGGDNSSVQNRTYIV 342
>UNIPROTKB|F1P6H3 [details] [associations]
symbol:GRIN2D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00540000070221 OMA:ARCGCPR
EMBL:AAEX03000823 Ensembl:ENSCAFT00000006426 Uniprot:F1P6H3
Length = 1126
Score = 187 (70.9 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 84/336 (25%), Positives = 147/336 (43%)
Query: 286 MNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNS 345
MN T + + F+ D LVNP+ V+++ T R W + Y P S
Sbjct: 154 MNITWDNRDYSFNEDGFLVNPSLVVISL--TRDRT---WEVVGSWEQQTLRLKY--PLWS 206
Query: 346 SSNRHLYSVIWPGEIT-AT--PRGWVF-----PNNGMPLRIAVPNRVSYNEFVAKDKSPP 397
R L V +T AT R +V P +G +R +VP R N + P
Sbjct: 207 RYGRFLQPVDDTQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSPPPDAP 266
Query: 398 G-----VKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAV 450
KG+CID+ + + + + G +GK+ + ++N ++ +V + D A+
Sbjct: 267 RPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAI 326
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
G +TI R+++VDF+ P++E+G+ V+ SP AFL+P++ +W++ L V
Sbjct: 327 GSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVV 386
Query: 511 AV-VWILEHR----FNNEFR-GP-PSQQLVTI---FWFSFSTMFFSHR--ENTVSSLGRX 558
AV V+I E+ +N G P TI W ++ +F + EN + +
Sbjct: 387 AVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKI 446
Query: 559 XXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ + G+
Sbjct: 447 MVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGL 482
Score = 92 (37.4 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 44/201 (21%), Positives = 89/201 (44%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISSTE----PI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ + G+ D + P+ G V +GS N +
Sbjct: 460 ASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGSTEKN-IRSNYPDM 518
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
S +V+ N AL + K G + A + + + K C+ T+G + F +
Sbjct: 519 HSYMVRY-NQPRVEEALTQ-LKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATT 576
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLT--YNECSMDLSPADGGGSRLSL 738
G+G A + S + A+LQ + +++ + WL+ Y+ +++ S+L +
Sbjct: 577 GYGIALHKGSRWKRPIDLALLQFLGDDEIEMLERLWLSGIYHNDKIEVM-----SSKLDI 631
Query: 739 KSFWGLFLICGIACFLALIFF 759
+ G+F + +A L+L+ F
Sbjct: 632 DNMAGVFYMLLVAMGLSLLVF 652
Score = 50 (22.7 bits), Expect = 4.6e-15, Sum P(3) = 4.6e-15
Identities = 12/51 (23%), Positives = 21/51 (41%)
Query: 111 PGASRSAINSLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVW 161
PGA + + + L + +F + +F A+ G+T YVW
Sbjct: 14 PGAGEAVLGAQLRSVSAQIRLLFCAREEAEP---VFRAAEEAGLTGPGYVW 61
>DICTYBASE|DDB_G0291356 [details] [associations]
symbol:grlE "GABA-B receptor protein" species:44689
"Dictyostelium discoideum" [GO:0008066 "glutamate receptor
activity" evidence=IMP] [GO:0007214 "gamma-aminobutyric acid
signaling pathway" evidence=IMP] [GO:0004965 "G-protein coupled
GABA receptor activity" evidence=IEA;IMP] [GO:0043327 "chemotaxis
to cAMP" evidence=IMP] [GO:0031152 "aggregation involved in
sorocarp development" evidence=IMP] [GO:0016021 "integral to
membrane" evidence=IEA;IDA] [GO:0007186 "G-protein coupled receptor
signaling pathway" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0006935 "chemotaxis" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000337
InterPro:IPR002455 InterPro:IPR017978 Pfam:PF00003 PRINTS:PR00248
PRINTS:PR01176 PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981
PROSITE:PS50259 dictyBase:DDB_G0291356 Pfam:PF01094 GO:GO:0016021
EMBL:AAFI02000177 GenomeReviews:CM000155_GR GO:GO:0007214
InterPro:IPR001828 GO:GO:0031152 GO:GO:0043327 eggNOG:NOG273984
KO:K04615 GO:GO:0004965 GO:GO:0008066 EMBL:DQ447637
RefSeq:XP_635160.1 ProteinModelPortal:Q54ET0 STRING:Q54ET0
GeneID:8628106 KEGG:ddi:DDB_G0291356 Uniprot:Q54ET0
Length = 816
Score = 216 (81.1 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 68/247 (27%), Positives = 112/247 (45%)
Query: 9 IGPQSSGIAHVISHVVNELNVPLLSFGATDPTLT-SLQYPYFLRTTQSDYYQMHAVADLV 67
+GP SG + V VP +SF AT +L+ S YPYF R D Q+ A+ L+
Sbjct: 105 VGPAYSGSSSTACLVFGAFAVPSISFYATGASLSNSGSYPYFQRVMPDDRLQVQAILSLL 164
Query: 68 EYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSL---LVG 124
+ GW V I ++DYG G L + + ++ P + A L +V
Sbjct: 165 KKNGWTRVSCIHTNEDYGNGGADQLVQQSNAQGITVNTNQAIDPVDNGIAPEQLYYDIVF 224
Query: 125 ANL--MESRVFVVH-VNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
NL +SRV V++ + P L I+ AK+ G + WI TD + T+P D
Sbjct: 225 DNLEAAKSRVIVLYALFPPDCLEIWKQAKARGFLGEGFTWIVTDGCAELTGGTDP---DL 281
Query: 182 MNLLQGVVALRHHTPD-TDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHALD 240
+ +L + T TD ++ ++ + N N+ F A ++YD+ + + ++
Sbjct: 282 LGVLATFPSYGLGTEAYTDFERTIVNDYNN-----NTGDAFYKGASFSYDATYAMLMGIE 336
Query: 241 ALLNEGG 247
A+L +GG
Sbjct: 337 AVLAKGG 343
Score = 61 (26.5 bits), Expect = 5.1e-15, Sum P(2) = 5.1e-15
Identities = 26/73 (35%), Positives = 36/73 (49%)
Query: 276 GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYD---VLN-IGGT-GS-RRIGYWSNYSG 329
G+Q L + F G++G I FD KN + Y +LN I T GS IG + SG
Sbjct: 348 GEQVRTELRNLKFNGITGTIAFD--KNTGDRLYGEFALLNLINSTKGSFDPIGKINPDSG 405
Query: 330 LSVVAPEILYTKP 342
+ +ILY+ P
Sbjct: 406 EITLKSDILYSGP 418
>UNIPROTKB|F1MR40 [details] [associations]
symbol:F1MR40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051930 "regulation of sensory perception of pain"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0001964 "startle response"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0051930 GO:GO:0030054 GO:GO:0045211 GO:GO:0008344
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0001964
GO:GO:0005234 GO:GO:0004972 GeneTree:ENSGT00540000070221
OMA:ARCGCPR EMBL:DAAA02047449 EMBL:DAAA02047450 EMBL:DAAA02047451
IPI:IPI00838975 Ensembl:ENSBTAT00000042550 Uniprot:F1MR40
Length = 993
Score = 187 (70.9 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 84/336 (25%), Positives = 147/336 (43%)
Query: 286 MNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAPEILYTKPPNS 345
MN T + + F+ D LVNP+ V+++ T R W + Y P S
Sbjct: 363 MNITWDNRDYSFNEDGFLVNPSLVVISL--TRDRT---WEVVGSWEQQTLRLKY--PLWS 415
Query: 346 SSNRHLYSVIWPGEIT-AT--PRGWVF-----PNNGMPLRIAVPNRVSYNEFVAKDKSPP 397
R L V +T AT R +V P +G +R +VP R N + P
Sbjct: 416 RYGRFLQPVDDTQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRTHSPPPDAP 475
Query: 398 G-----VKGYCIDVFEAAVNLLPYPVPHNYIMYG-NGKR-NPIYNDIVQQVALNKFDAAV 450
KG+CID+ + + + + G +GK+ + ++N ++ +V + D A+
Sbjct: 476 RPEKRCCKGFCIDILKRLAQTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAI 535
Query: 451 GDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG 510
G +TI R+++VDF+ P++E+G+ V+ SP AFL+P++ +W++ L V
Sbjct: 536 GSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVV 595
Query: 511 AV-VWILEHR----FNNEFR-GP-PSQQLVTI---FWFSFSTMFFSHR--ENTVSSLGRX 558
AV V+I E+ +N G P TI W ++ +F + EN + +
Sbjct: 596 AVTVFIFEYLSPVGYNRSLATGKRPGGSTFTIGKSIWLLWALVFNNSVPVENPRGTTSKI 655
Query: 559 XXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGI 594
+SYTA+L + + ++ + G+
Sbjct: 656 MVLVWAFFAVIFLASYTANLAAFMIQEEYVDTVSGL 691
Score = 77 (32.2 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 27/154 (17%), Positives = 63/154 (40%)
Query: 12 QSSGIAHVISHVVNELNVPLLSF-GATDPTLTSLQY-PYFLRTTQSDYYQMHAVADLVEY 69
++ +A ++ + + ++P+++ G LT + FL+ S Q+ + +++E
Sbjct: 120 RAPAVAPILDFLSAQTSLPIVAVHGGAALVLTPKEKGSTFLQLGSSTEQQLQVIFEVLEE 179
Query: 70 YGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFS--PGASRSAINSLLVGANL 127
Y W +A+ R +S + ++ + PGA + +++ L +
Sbjct: 180 YDWTSFVAVTTRAPGHRAFLSYIEVLTDGSLVGWEHRGALTLDPGAGEAVLSAQLRSVSA 239
Query: 128 MESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVW 161
+F + +F A+ G+T YVW
Sbjct: 240 QIRLLFCAREEAEP---VFRAAEEAGLTGPGYVW 270
Score = 62 (26.9 bits), Expect = 5.7e-15, Sum P(3) = 5.7e-15
Identities = 34/147 (23%), Positives = 62/147 (42%)
Query: 572 SSYTASLTSILTVQQLTSQIEGI-DSLISSTE----PI--G-VQDGSFAWNYLVDELKIA 623
+SYTA+L + + ++ + G+ D + P+ G V +GS N +
Sbjct: 669 ASYTANLAAFMIQEEYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGSTEKN-IRSNYPDM 727
Query: 624 ESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKS 680
S +V+ N AL + K G + A + + + K C+ T+G + F +
Sbjct: 728 HSYMVRY-NQPRVEEALTQ-LKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATT 785
Query: 681 GWGFAFQRDSPLAIDLSTAILQLSENG 707
G+G A + S + A+LQ +G
Sbjct: 786 GYGIALHKGSRWKRPIDLALLQFLGDG 812
>RGD|2732 [details] [associations]
symbol:Grik1 "glutamate receptor, ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity"
evidence=IEA;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0008144 "drug binding" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IDA] [GO:0014054
"positive regulation of gamma-aminobutyric acid secretion"
evidence=ISO] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=ISO;IDA] [GO:0016020 "membrane" evidence=ISO]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016595
"glutamate binding" evidence=IDA] [GO:0022843 "voltage-gated cation
channel activity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;IDA] [GO:0030534
"adult behavior" evidence=ISO] [GO:0032229 "negative regulation of
synaptic transmission, GABAergic" evidence=IDA] [GO:0032230 "positive
regulation of synaptic transmission, GABAergic" evidence=ISO;IDA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=ISO] [GO:0035235 "ionotropic glutamate receptor signaling
pathway" evidence=ISO;IDA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISO] [GO:0042391 "regulation of membrane
potential" evidence=ISO] [GO:0042734 "presynaptic membrane"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043235 "receptor
complex" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0048167 "regulation of synaptic plasticity"
evidence=TAS] [GO:0048172 "regulation of short-term neuronal synaptic
plasticity" evidence=IDA] [GO:0048266 "behavioral response to pain"
evidence=ISO] [GO:0051899 "membrane depolarization" evidence=ISO]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0042803
GO:GO:0007399 GO:GO:0008144 GO:GO:0032229 GO:GO:0051967 GO:GO:0007268
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0030425
GO:GO:0048266 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0032230
GO:GO:0060080 GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828
GO:GO:0048172 GO:GO:0016595 eggNOG:NOG316680 GO:GO:0008328
GO:GO:0005234 HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277
GO:GO:0032983 CTD:2897 KO:K05201 GO:GO:0022843 EMBL:M83560
EMBL:M83561 EMBL:Z11712 EMBL:Z11713 EMBL:Z11714 IPI:IPI00231402
IPI:IPI00569872 IPI:IPI00951061 IPI:IPI00952320 PIR:S19808
RefSeq:NP_001104584.1 RefSeq:NP_001104587.1 RefSeq:NP_058937.1
UniGene:Rn.10449 PDB:1TXF PDB:1VSO PDB:1YCJ PDB:2F34 PDB:2F35
PDB:2F36 PDB:2OJT PDB:2PBW PDB:2QS1 PDB:2QS2 PDB:2QS3 PDB:2QS4
PDB:2WKY PDB:3C31 PDB:3C32 PDB:3C33 PDB:3C34 PDB:3C35 PDB:3C36
PDB:3GBA PDB:3GBB PDB:3S2V PDB:4DLD PDB:4E0X PDBsum:1TXF PDBsum:1VSO
PDBsum:1YCJ PDBsum:2F34 PDBsum:2F35 PDBsum:2F36 PDBsum:2OJT
PDBsum:2PBW PDBsum:2QS1 PDBsum:2QS2 PDBsum:2QS3 PDBsum:2QS4
PDBsum:2WKY PDBsum:3C31 PDBsum:3C32 PDBsum:3C33 PDBsum:3C34
PDBsum:3C35 PDBsum:3C36 PDBsum:3GBA PDBsum:3GBB PDBsum:3S2V
PDBsum:4DLD PDBsum:4E0X ProteinModelPortal:P22756 SMR:P22756
DIP:DIP-29257N STRING:P22756 TCDB:1.A.10.1.5 PhosphoSite:P22756
PRIDE:P22756 GeneID:29559 KEGG:rno:29559 UCSC:RGD:2732
InParanoid:P22756 BindingDB:P22756 ChEMBL:CHEMBL2919
EvolutionaryTrace:P22756 NextBio:609606 ArrayExpress:P22756
Genevestigator:P22756 GermOnline:ENSRNOG00000001575 Uniprot:P22756
Length = 949
Score = 169 (64.5 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 69/291 (23%), Positives = 127/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+ YC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 476 EAYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 535
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 536 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 595
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 596 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 655
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 656 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 715
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 716 TYEKMWAFMSSRQQS--ALVKNSDEGIQRVLTTD--YA-LLMESTSIEYVT 761
Score = 161 (61.7 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 623 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 682
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 683 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQS--ALVKNSDEGI 740
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 741 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 799
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 800 LQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 853
Query: 763 VCGQF 767
G+F
Sbjct: 854 -IGEF 857
Score = 111 (44.1 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 82/354 (23%), Positives = 136/354 (38%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ S Y DY + AV
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDSRDLFYI--NLYPDYAAISRAV 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P A++ A LL
Sbjct: 162 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPPANKDA-KPLL- 216
Query: 124 GANLMESRVFVV--HVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ +S+ F V + +T I +GM Y + T LD E
Sbjct: 217 -KEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSG 274
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWL 234
+N+ G L P + I +W + L+ +G + A YD+V++
Sbjct: 275 VNMT-GFRKLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYM 330
Query: 235 VAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGE 294
VA A + + T S+ + H L G +F+ + + GL+G
Sbjct: 331 VAIAS----HRASQLTVSS-LQCHRHKPCAL----------GPRFMNLIKEARWDGLTGR 375
Query: 295 IRFDADKNLVNPA-YDVLNIGGTGS---------------RRIGYWSNYSGLSV 332
I F+ L D++++ G+ ++IG W++ SGL++
Sbjct: 376 ITFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGIWNSNSGLNM 429
>UNIPROTKB|P22756 [details] [associations]
symbol:Grik1 "Glutamate receptor ionotropic, kainate 1"
species:10116 "Rattus norvegicus" [GO:0030054 "cell junction"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2732 GO:GO:0042803
GO:GO:0007399 GO:GO:0008144 GO:GO:0032229 GO:GO:0051967
GO:GO:0007268 GO:GO:0014054 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0030425 GO:GO:0048266 GO:GO:0060079
GO:GO:0042734 GO:GO:0043195 GO:GO:0032230 GO:GO:0060080
GO:GO:0035249 GO:GO:0030534 InterPro:IPR001828 GO:GO:0048172
GO:GO:0016595 eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234
HOGENOM:HOG000234371 HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983
CTD:2897 KO:K05201 GO:GO:0022843 EMBL:M83560 EMBL:M83561
EMBL:Z11712 EMBL:Z11713 EMBL:Z11714 IPI:IPI00231402 IPI:IPI00569872
IPI:IPI00951061 IPI:IPI00952320 PIR:S19808 RefSeq:NP_001104584.1
RefSeq:NP_001104587.1 RefSeq:NP_058937.1 UniGene:Rn.10449 PDB:1TXF
PDB:1VSO PDB:1YCJ PDB:2F34 PDB:2F35 PDB:2F36 PDB:2OJT PDB:2PBW
PDB:2QS1 PDB:2QS2 PDB:2QS3 PDB:2QS4 PDB:2WKY PDB:3C31 PDB:3C32
PDB:3C33 PDB:3C34 PDB:3C35 PDB:3C36 PDB:3GBA PDB:3GBB PDB:3S2V
PDB:4DLD PDB:4E0X PDBsum:1TXF PDBsum:1VSO PDBsum:1YCJ PDBsum:2F34
PDBsum:2F35 PDBsum:2F36 PDBsum:2OJT PDBsum:2PBW PDBsum:2QS1
PDBsum:2QS2 PDBsum:2QS3 PDBsum:2QS4 PDBsum:2WKY PDBsum:3C31
PDBsum:3C32 PDBsum:3C33 PDBsum:3C34 PDBsum:3C35 PDBsum:3C36
PDBsum:3GBA PDBsum:3GBB PDBsum:3S2V PDBsum:4DLD PDBsum:4E0X
ProteinModelPortal:P22756 SMR:P22756 DIP:DIP-29257N STRING:P22756
TCDB:1.A.10.1.5 PhosphoSite:P22756 PRIDE:P22756 GeneID:29559
KEGG:rno:29559 UCSC:RGD:2732 InParanoid:P22756 BindingDB:P22756
ChEMBL:CHEMBL2919 EvolutionaryTrace:P22756 NextBio:609606
ArrayExpress:P22756 Genevestigator:P22756
GermOnline:ENSRNOG00000001575 Uniprot:P22756
Length = 949
Score = 169 (64.5 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 69/291 (23%), Positives = 127/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+ YC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 476 EAYCLDLLKELSNILGFLYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 535
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 536 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 595
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 596 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 655
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 656 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 715
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 716 TYEKMWAFMSSRQQS--ALVKNSDEGIQRVLTTD--YA-LLMESTSIEYVT 761
Score = 161 (61.7 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 623 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 682
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 683 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQS--ALVKNSDEGI 740
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 741 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 799
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 800 LQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 853
Query: 763 VCGQF 767
G+F
Sbjct: 854 -IGEF 857
Score = 111 (44.1 bits), Expect = 5.9e-15, Sum P(2) = 5.9e-15
Identities = 82/354 (23%), Positives = 136/354 (38%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ S Y DY + AV
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDSRDLFYI--NLYPDYAAISRAV 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P A++ A LL
Sbjct: 162 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPPANKDA-KPLL- 216
Query: 124 GANLMESRVFVV--HVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ +S+ F V + +T I +GM Y + T LD E
Sbjct: 217 -KEMKKSKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSG 274
Query: 182 MNLLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWL 234
+N+ G L P + I +W + L+ +G + A YD+V++
Sbjct: 275 VNMT-GFRKLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYM 330
Query: 235 VAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGE 294
VA A + + T S+ + H L G +F+ + + GL+G
Sbjct: 331 VAIAS----HRASQLTVSS-LQCHRHKPCAL----------GPRFMNLIKEARWDGLTGR 375
Query: 295 IRFDADKNLVNPA-YDVLNIGGTGS---------------RRIGYWSNYSGLSV 332
I F+ L D++++ G+ ++IG W++ SGL++
Sbjct: 376 ITFNKTDGLRKDFDLDIISLKEEGTEKASGEVSKHLYKVWKKIGIWNSNSGLNM 429
>UNIPROTKB|F1P0L4 [details] [associations]
symbol:GRIK3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0001640
"adenylate cyclase inhibiting G-protein coupled glutamate receptor
activity" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0015277 GeneTree:ENSGT00590000083056
OMA:EEQAFRF GO:GO:0001640 EMBL:AADN02043882 EMBL:AADN02043883
IPI:IPI00577160 ProteinModelPortal:F1P0L4
Ensembl:ENSGALT00000003274 Uniprot:F1P0L4
Length = 891
Score = 168 (64.2 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 61/230 (26%), Positives = 107/230 (46%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+GYCID+ + +L + + YG +N +++++ +K D AV +TI
Sbjct: 435 EGYCIDLLKELAVILGFTYEIRLVEDGKYGAQDDKGQWNGMIKELIDHKADLAVAPLTIT 494
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K +DF++P+M G+ ++ S ++FL P + +W+ +L V V+++
Sbjct: 495 HVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYILLAYLGVSCVLFV 554
Query: 516 LEHRFNN-EFRG--P--PSQQLV----TIF---WFSFSTMFFSHRENTVSSLG-RXXXXX 562
+ RF+ E+ P P +V T+F WF + E +L R
Sbjct: 555 IA-RFSPYEWYDAHPCNPGSDIVENNFTLFNSFWFGMGALMQQGSELMPKALSTRIIGGI 613
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 614 WWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVKDGA 663
Score = 163 (62.4 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 73/302 (24%), Positives = 126/302 (41%)
Query: 486 SPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRG--P--PSQQLV----TIF- 536
S ++FL P + +W+ +L V V++++ E+ P P +V T+F
Sbjct: 525 SVFSFLNPLSPDIWMYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSDIVENNFTLFN 584
Query: 537 --WFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEG 593
WF + E +L R SSYTA+L + LTV+++ S I+
Sbjct: 585 SFWFGMGALMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDS 644
Query: 594 IDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG---- 647
D L T+ G V+DG+ + ++ E M AL + + G
Sbjct: 645 ADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAF---MSSKPTALVKNNEEGIQRT 701
Query: 648 --GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSE 705
A++ E IE ++++ NC VG G+G SP ++ AILQL E
Sbjct: 702 LTADYALLMESTTIE-YITQRNCNLTQVGGLIDSKGYGIGTPMGSPYRDKITIAILQLQE 760
Query: 706 NGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICG----IACFLALIFFFC 761
L + KW N C D + S L +++ G+F++ ++ F+A++ F
Sbjct: 761 EDKLHVMKEKWWRGNGCPEDENKE---ASALGIQNIGGIFIVLAAGLVLSVFVAMVEFIY 817
Query: 762 RV 763
++
Sbjct: 818 KL 819
Score = 111 (44.1 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 75/338 (22%), Positives = 126/338 (37%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VVA GP + + + N L VP + L + Y DY + HA+
Sbjct: 78 VVAIFGPSQGSCTNAVQSICNALEVPHIQLRWKHHPLDNKDTFYV--NLYPDYASLSHAI 135
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKA-PFSPGASRSAINSLL 122
DLV+Y WR ++ DD G + L A S+ ++ + P +R + +
Sbjct: 136 LDLVQYLKWRSATVVY-DDSTGLIRLQELIMAPSRYNIRLKIRQLPLDTDDARPLLKEMK 194
Query: 123 VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTM 182
G E R+ + + I A ++GM Y +I T LD EP +
Sbjct: 195 RGR---EFRI-IFDCSHLMAAQILRQAMAMGMMTEYYHFIFTTLDLYALD-LEPYRYSGV 249
Query: 183 NLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFNSYALYAYDSVWLVAHAL--D 240
NL G L P + I +W ++ +++P L D V + AL D
Sbjct: 250 NLT-GFRILNVENPHVS---SIIEKWA-MERLQSAPKA----ELGLLDGVMMTDAALLYD 300
Query: 241 ALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGG-QQFLQTLLRMNFTGL-----SGE 294
A+ + P++ N + F G F++ TG S
Sbjct: 301 AV--HVVSVCYQRAPQM-TVNSLQCHRHKAWRFGGRFMNFIKEAQWEGLTGRIVFNKSSG 357
Query: 295 IRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
+R D D D++++ G ++G W+ +GL++
Sbjct: 358 LRTDFD-------LDIISLKEDGLEKVGTWNPSNGLNI 388
Score = 38 (18.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 138 NPDTGLTIFSVAKSLG 153
NP GL I ++K G
Sbjct: 381 NPSNGLNITEISKGRG 396
>UNIPROTKB|E1BKL6 [details] [associations]
symbol:GRIK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0031630 "regulation of synaptic vesicle fusion to
presynaptic membrane" evidence=IEA] [GO:0015277 "kainate selective
glutamate receptor activity" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0060079
GO:GO:0042734 GO:GO:0035249 InterPro:IPR001828
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 OMA:NINSVME GO:GO:0031630 EMBL:DAAA02047229
EMBL:DAAA02047230 EMBL:DAAA02047231 IPI:IPI00838934
Ensembl:ENSBTAT00000015567 Uniprot:E1BKL6
Length = 972
Score = 187 (70.9 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 84/362 (23%), Positives = 146/362 (40%)
Query: 424 MYGNGKRNPIYNDIVQQ-VALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQK 482
+YG + N + +V + + K D AV TI R K++DF++P+M G+ ++ V
Sbjct: 471 LYGAPEPNGSWTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHM 530
Query: 483 -LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWILEHRFNNEFRGP-PS--------QQL 532
K ++FL PF+ +WL +L V V+++ E+ P P +
Sbjct: 531 GRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQ 590
Query: 533 VTI---FWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLT 588
T+ WF E +L R SSYTA+L + LTVQ++
Sbjct: 591 YTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRME 650
Query: 589 SQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG 647
+E D L T G + + R+ ++ S+ + +G
Sbjct: 651 VPVESADDLADQTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEG- 709
Query: 648 GVAAIVDELP--YIELFMS----KTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAIL 701
+A +++ +E M+ + NC +G G+G SP + A++
Sbjct: 710 -IARVLNSRYAFLLESTMNEYHRRLNCNLTQIGGLLDTKGYGIGMPLGSPPRPITTLALV 768
Query: 702 QLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLF--LICG--IACFLALI 757
+ N L+ + KW C + D L +++ G+F LICG IA F+A++
Sbjct: 769 SGTWNHHLEILKRKWWEGGRCPKE---EDHRAKGLGMENIGGIFVVLICGLIIAVFVAVM 825
Query: 758 FF 759
F
Sbjct: 826 EF 827
Score = 129 (50.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 35/133 (26%), Positives = 64/133 (48%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYGNGKRNPIYNDIVQQ-VALNKFDAAVGDITI 455
+G+C+D+ LL + + +YG + N + +V + + K D AV TI
Sbjct: 444 EGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQKADLAVAAFTI 503
Query: 456 VTNRTKLVDFTQPYMESGLVVVAPVQK-LKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ V K ++FL PF+ +WL +L V V++
Sbjct: 504 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLF 563
Query: 515 ILEHRFNNEFRGP 527
+ E+ P
Sbjct: 564 LAARLSPYEWYNP 576
Score = 92 (37.4 bits), Expect = 6.8e-15, Sum P(2) = 6.8e-15
Identities = 49/198 (24%), Positives = 79/198 (39%)
Query: 134 VVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMNLLQGVVALRH 193
++ N I A LGMT+ Y +I T +L V+ D+ N+L G
Sbjct: 215 IIDANASISHLILRKASELGMTSAFYKYILTTMDFPILHLDGVVE-DSSNIL-GFSMFNT 272
Query: 194 HTPDTDLKKNFISRWKNLKYKEN-SPSGFNSYALYA---YDSVWLVAHALDALLNEGGKF 249
P F+ R N+ ++EN S + AL A +D+V +V A+ L
Sbjct: 273 SHP---FYPEFV-RSLNMSWRENCEASTYPGPALSAALMFDAVHVVVSAVREL------- 321
Query: 250 TFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYD 309
N + + L +S ++ G + L + + GL+G + F++ N
Sbjct: 322 ---N--RSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYTLR 376
Query: 310 VLNIGGTGSRRIGYW-SN 326
+L G R IG W SN
Sbjct: 377 ILEKSRQGHREIGVWYSN 394
Score = 82 (33.9 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 68/299 (22%), Positives = 119/299 (39%)
Query: 5 VVAAIGPQSS-GIAHVISHVVNELNVPLLSFGATD-PTLTSLQYPYFLRTTQSDYYQMHA 62
VV+ +GP SS A +SH+ E +P + G + P L L++ ++ + A
Sbjct: 90 VVSVLGPSSSPASASTVSHICGEKEIPHIKVGPEETPRLQYLRFASVSLYPSNEDVSL-A 148
Query: 63 VADLVEYYGWREVIAIFVDDD-YGRNGISVLGDALSKKRAKISYKAPF-SPGASRSAINS 120
V+ +++ + + I + R V G +SK+ + P I
Sbjct: 149 VSRILKSFNYPSASLICAKAECLLRLEELVRGFLISKETLSVRMLDDSRDPTPLLKEIRD 208
Query: 121 LLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDID 180
V ++++ + H+ I A LGMT+ Y +I T +L V+ D
Sbjct: 209 DKVSTIIIDANASISHL-------ILRKASELGMTSAFYKYILTTMDFPILHLDGVVE-D 260
Query: 181 TMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKEN-SPSGFNSYALYA---YDSVWLVA 236
+ N+L G P F+ R N+ ++EN S + AL A +D+V +V
Sbjct: 261 SSNIL-GFSMFNTSHP---FYPEFV-RSLNMSWRENCEASTYPGPALSAALMFDAVHVVV 315
Query: 237 HALDALLNE---GGKFTFSNDPKLHDTNGSMLNLSSLRVFDG--GQ-QFLQTLLRMNFT 289
A+ L G K + S++N + +DG G+ +F R N+T
Sbjct: 316 SAVRELNRSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTNYT 374
Score = 38 (18.4 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 285 RMNFTGLSGEIRFD 298
R NF LSG RF+
Sbjct: 431 RPNFQALSGNERFE 444
>ZFIN|ZDB-GENE-060809-5 [details] [associations]
symbol:si:ch211-251b21.1 "si:ch211-251b21.1"
species:7955 "Danio rerio" [GO:0004872 "receptor activity"
evidence=IEA] [GO:0005215 "transporter activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 ZFIN:ZDB-GENE-060809-5 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GO:GO:0005234 GO:GO:0004970 eggNOG:NOG241927
GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371
HOVERGEN:HBG104989 OrthoDB:EOG43FGX0 EMBL:CU499311 IPI:IPI00482094
RefSeq:NP_001138274.1 UniGene:Dr.3211 Ensembl:ENSDART00000008778
Ensembl:ENSDART00000139096 GeneID:571720 KEGG:dre:571720
OMA:QEGNFAF NextBio:20890667 Uniprot:B8JLR6
Length = 458
Score = 220 (82.5 bits), Expect = 8.5e-15, P = 8.5e-15
Identities = 90/378 (23%), Positives = 160/378 (42%)
Query: 399 VKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITI 455
++G+CID+ A N L + + + G GK + +N ++ +V + D AV +T+
Sbjct: 43 LEGFCIDMLSAISNKLGFKYDVHLVKDGRYGKTDDSGNWNGMIGEVVRGEADIAVAPLTL 102
Query: 456 VTNRTKLVDFTQPYMESGLVVVAPVQKLKSSPWAFL---KPFTIPMWLVTGGFFLFVGAV 512
R +VD ++P+M++GL + + L S FL K F+ MW+ +L
Sbjct: 103 TAQREAVVDMSKPFMQTGLSFIMR-KDLGSDDSQFLSLLKLFSTEMWMGVLVAYLLTSIC 161
Query: 513 VWILEHRFNNEFRGPPSQQ----LVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXX 567
++++ E+ P L FW++ + +L GR
Sbjct: 162 IFLVSRISPCEWEQPEKDNNSFTLSHSFWYTVGALTLQGAGPHPKALSGRVITSIWWIFS 221
Query: 568 XXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESR 626
+ Y A+L+ L I+ + L + G S ++N+ + R
Sbjct: 222 LVLLACYFANLSLWLHSDNQQLSIKTFEDLANQNVIEYGTIKDSSSFNFFKNSNNPTYHR 281
Query: 627 LVK-LKNMEEYSIALARGPKGG--GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWG 683
+ + +K + YS+ A G + G A + E ++L +++ C + G+
Sbjct: 282 IYEHIKEAQSYSLNAAEGFRRAQKGNYAFIGESVSLDLAVARY-CNLTRAPEIIGMRGYS 340
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWG 743
A SPL +LS AIL+LSE+G+L +KW + C D G+ L S G
Sbjct: 341 IAAPLGSPLIKNLSVAILRLSESGELDYFRSKWWA-SSCVAK----DSKGAPLKPASLKG 395
Query: 744 LFLIC----GIACFLALI 757
+FL+ G+ FLAL+
Sbjct: 396 VFLLLAFGLGLGIFLALM 413
>WB|WBGene00001614 [details] [associations]
symbol:glr-3 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 eggNOG:NOG316680 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371
HSSP:P19491 EMBL:Z75545 PIR:T23570 RefSeq:NP_492017.3
UniGene:Cel.19345 ProteinModelPortal:Q21415 SMR:Q21415
EnsemblMetazoa:K10D3.1 GeneID:172449 KEGG:cel:CELE_K10D3.1
UCSC:K10D3.1 CTD:172449 WormBase:K10D3.1 InParanoid:Q21415
OMA:RIVINIP NextBio:875561 ArrayExpress:Q21415 Uniprot:Q21415
Length = 836
Score = 215 (80.7 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 55/219 (25%), Positives = 104/219 (47%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIM---YGNGKRNPIYNDIVQQVALNKFDAAVGDITIV 456
+GYCID+ N+L + + YG+ + N ++ +V ++ D AV +TI
Sbjct: 423 EGYCIDLLHKIANILKFTYTIQKVRDNAYGSKESNGKWSGMVGELQRGDADLAVASLTIS 482
Query: 457 TNRTKLVDFTQPYMESGLVVVAPVQKLKSSPW-AFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R++++DFT PYM G+ ++ +++ S W F+ P + +W++T + V +WI
Sbjct: 483 YGRSEVIDFTVPYMHLGISILFKKPRIRDSDWFKFMDPLSTQVWIMTFASYFVVSVAIWI 542
Query: 516 LE-----HRF-----NNEFRGPPSQ-QLVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ +F N +++ +Q L FWF+ ++ E + R
Sbjct: 543 IAKISPYEQFERDEDNGQYKPVDNQFSLRNSFWFTVCSLMQQGSELCPRAASTRLLTGIW 602
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
SSYTA+L ++LT +++ + IE D L + T+
Sbjct: 603 WFFALILISSYTANLAAVLTTRRMETPIENADDLAAQTK 641
Score = 154 (59.3 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 67/294 (22%), Positives = 122/294 (41%)
Query: 490 FLKPFTIPMWLVTGGFFLFVGAVVWILE-----HRF-----NNEFRGPPSQ-QLVTIFWF 538
F+ P + +W++T + V +WI+ +F N +++ +Q L FWF
Sbjct: 517 FMDPLSTQVWIMTFASYFVVSVAIWIIAKISPYEQFERDEDNGQYKPVDNQFSLRNSFWF 576
Query: 539 SFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSL 597
+ ++ E + R SSYTA+L ++LT +++ + IE D L
Sbjct: 577 TVCSLMQQGSELCPRAASTRLLTGIWWFFALILISSYTANLAAVLTTRRMETPIENADDL 636
Query: 598 ISSTE-PIGVQDGSFAWNYLVDELKIAE-SRLVKLKN------MEEYSIALARGPKGGGV 649
+ T+ G ++ +E KI R+ +L + ++ +AR K
Sbjct: 637 AAQTKIKYGTLGRGSTMSFF-NESKIETYERMWQLMSSSPGLFVQSSKEGIAR-VKSSDY 694
Query: 650 AAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDL 709
A ++ E +E + + +CE +G + G+G + SP +STAIL+L E +L
Sbjct: 695 AYLM-ESSMLEYAVER-DCELMQIGGLIDQKGYGIGLPKGSPYRELISTAILRLQEKTEL 752
Query: 710 QKIHNKWLTYNE--CSMDLSPADGGGSRLSLKSFWGLF--LICGIACFLALIFF 759
++ KW C G +S G+F L+ G+ L+ F
Sbjct: 753 TELKEKWWKDKSVVCEQPKRKDQDDG-----ESIGGIFIILVVGLVLTAVLVIF 801
Score = 60 (26.2 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 17/68 (25%), Positives = 33/68 (48%)
Query: 17 AHVISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQSDYYQMHAVADLVEYYGWREV 75
A ++ + + NVP +S + PT S +P+ +S AVA ++ W++V
Sbjct: 99 AAIVQSIADNTNVPCVSLHLSPPTRPSTHLHPHL--NAKS-----LAVAAFIKREKWKDV 151
Query: 76 IAIFVDDD 83
+ +F + D
Sbjct: 152 VVVFEEPD 159
>UNIPROTKB|H7BYG7 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 ProteinModelPortal:H7BYG7
SMR:H7BYG7 Ensembl:ENST00000389124 Bgee:H7BYG7 Uniprot:H7BYG7
Length = 871
Score = 179 (68.1 bits), Expect = 9.7e-15, Sum P(3) = 9.7e-15
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 476 EGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 535
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 536 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 595
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 596 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 655
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 656 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 715
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL R G + + Y L M T+ E+ T
Sbjct: 716 TYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YA-LLMESTSIEYVT 761
Score = 162 (62.1 bits), Expect = 6.5e-13, Sum P(3) = 6.5e-13
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 623 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 682
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL R G
Sbjct: 683 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGI 740
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 741 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 799
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + + S L +++ G+F++ +A L L F
Sbjct: 800 LQEEGKLHMMKEKWWRGNGCPEEDNKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 853
Query: 763 VCGQF 767
G+F
Sbjct: 854 -IGEF 857
Score = 99 (39.9 bits), Expect = 9.7e-15, Sum P(3) = 9.7e-15
Identities = 56/242 (23%), Positives = 90/242 (37%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + A+
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYI--NLYPDYAAISRAI 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 162 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I +GM Y + T LD E +N
Sbjct: 218 EMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 276
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 277 MT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 332
Query: 237 HA 238
A
Sbjct: 333 IA 334
Score = 44 (20.5 bits), Expect = 9.7e-15, Sum P(3) = 9.7e-15
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 276 GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPA-YDVLNIGGTGS---------------R 319
G +F+ + + GL+G I F+ L D++++ G+ +
Sbjct: 357 GPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWK 416
Query: 320 RIGYWSNYSGLSV 332
+IG W++ SGL++
Sbjct: 417 KIGIWNSNSGLNM 429
Score = 44 (20.5 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 470 MESGLVVVAPVQKLKSSPWA------FLKPFTIPMWLVTGGFF 506
ME G ++ P + + WA ++ P T P L GG F
Sbjct: 1 MEHGTLLAQPGLWTRDTSWALLYFLCYILPQTAPQVLRIGGIF 43
>UNIPROTKB|J9NV46 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:AAEX03016479
Ensembl:ENSCAFT00000048687 Uniprot:J9NV46
Length = 849
Score = 179 (68.1 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ +K D AV +TI
Sbjct: 405 EGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTIT 464
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 465 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 524
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 525 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 584
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 585 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 644
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 645 TYEKMWAFMSSRQQ--TALVKNSDEGIQRVLTTD--YA-LLMESTSIEYVT 690
Score = 162 (62.1 bits), Expect = 7.1e-13, Sum P(2) = 7.1e-13
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 552 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 611
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 612 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVKNSDEGI 669
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 670 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 728
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 729 LQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 782
Query: 763 VCGQF 767
G+F
Sbjct: 783 -IGEF 786
Score = 97 (39.2 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 76/352 (21%), Positives = 130/352 (36%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + AV
Sbjct: 33 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYI--NLYPDYAAISRAV 90
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 91 LDLVLYYNWKTVTLVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 146
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + T I +GM Y + T LD E +N
Sbjct: 147 EMKKGKEFYVIFDCSHGTAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 205
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 206 MT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 261
Query: 237 HALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIR 296
A + + T S+ L + + G +F+ + + GL+G I
Sbjct: 262 IAS----HRASQLTVSS-----------LQCHRHKPWRLGPRFMNLIKEARWDGLTGRIT 306
Query: 297 FDADKNLVNPA-YDVLNIGGTGS---------------RRIGYWSNYSGLSV 332
F+ L D++++ G+ ++IG W++ SGL++
Sbjct: 307 FNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNM 358
>UNIPROTKB|F1P9T1 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 OMA:KELIDHR EMBL:AAEX03016479
Ensembl:ENSCAFT00000013975 Uniprot:F1P9T1
Length = 879
Score = 179 (68.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ +K D AV +TI
Sbjct: 437 EGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTIT 496
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 497 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 556
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 557 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 616
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 617 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 676
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 677 TYEKMWAFMSSRQQ--TALVKNSDEGIQRVLTTD--YA-LLMESTSIEYVT 722
Score = 162 (62.1 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 584 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 643
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 644 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVKNSDEGI 701
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 702 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 760
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 761 LQEEGKLHMMKEKWWRGNGCPEEDSKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 814
Query: 763 VCGQF 767
G+F
Sbjct: 815 -IGEF 818
Score = 97 (39.2 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 76/352 (21%), Positives = 130/352 (36%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + AV
Sbjct: 65 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYI--NLYPDYAAISRAV 122
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 123 LDLVLYYNWKTVTLVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 178
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + T I +GM Y + T LD E +N
Sbjct: 179 EMKKGKEFYVIFDCSHGTAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 237
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 238 MT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 293
Query: 237 HALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEIR 296
A + + T S+ L + + G +F+ + + GL+G I
Sbjct: 294 IAS----HRASQLTVSS-----------LQCHRHKPWRLGPRFMNLIKEARWDGLTGRIT 338
Query: 297 FDADKNLVNPA-YDVLNIGGTGS---------------RRIGYWSNYSGLSV 332
F+ L D++++ G+ ++IG W++ SGL++
Sbjct: 339 FNKTDGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWKKIGIWNSNSGLNM 390
>UNIPROTKB|P39086 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0014054 "positive
regulation of gamma-aminobutyric acid secretion" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0032230 "positive regulation of synaptic
transmission, GABAergic" evidence=IEA] [GO:0032983 "kainate
selective glutamate receptor complex" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0042734
"presynaptic membrane" evidence=IEA] [GO:0048266 "behavioral
response to pain" evidence=IEA] [GO:0051967 "negative regulation of
synaptic transmission, glutamatergic" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0060080 "regulation of inhibitory postsynaptic
membrane potential" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0015277 "kainate selective glutamate
receptor activity" evidence=IDA] [GO:0051966 "regulation of
synaptic transmission, glutamatergic" evidence=TAS] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=TAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0007399 "nervous system development"
evidence=TAS] [GO:0007417 "central nervous system development"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0005887
GO:GO:0008144 GO:GO:0032229 GO:GO:0051967 GO:GO:0007268
GO:GO:0014054 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0030425 GO:GO:0048266 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0032230 GO:GO:0060080 GO:GO:0007417
GO:GO:0035249 DrugBank:DB00142 GO:GO:0030534 InterPro:IPR001828
GO:GO:0048172 DrugBank:DB00273 GO:GO:0051966 GO:GO:0016595
eggNOG:NOG316680 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:L19058
EMBL:U16125 EMBL:AJ249208 IPI:IPI00783047 IPI:IPI00937051
PIR:I58178 RefSeq:NP_000821.1 RefSeq:NP_783300.1 UniGene:Hs.664641
PDB:2ZNS PDB:2ZNT PDB:2ZNU PDB:3FUZ PDB:3FV1 PDB:3FV2 PDB:3FVG
PDB:3FVK PDB:3FVN PDB:3FVO PDBsum:2ZNS PDBsum:2ZNT PDBsum:2ZNU
PDBsum:3FUZ PDBsum:3FV1 PDBsum:3FV2 PDBsum:3FVG PDBsum:3FVK
PDBsum:3FVN PDBsum:3FVO ProteinModelPortal:P39086 SMR:P39086
STRING:P39086 PhosphoSite:P39086 DMDM:729597 PaxDb:P39086
PRIDE:P39086 DNASU:2897 Ensembl:ENST00000389125
Ensembl:ENST00000399907 GeneID:2897 KEGG:hsa:2897 UCSC:uc002ynn.3
UCSC:uc002yno.1 CTD:2897 GeneCards:GC21M030909 HGNC:HGNC:4579
MIM:138245 neXtProt:NX_P39086 PharmGKB:PA28973 KO:K05201
BindingDB:P39086 ChEMBL:CHEMBL1918 EvolutionaryTrace:P39086
GenomeRNAi:2897 NextBio:11463 ArrayExpress:P39086 Bgee:P39086
CleanEx:HS_GRIK1 Genevestigator:P39086 GermOnline:ENSG00000171189
GO:GO:0022843 Uniprot:P39086
Length = 918
Score = 179 (68.1 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 476 EGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 535
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 536 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 595
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 596 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 655
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 656 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 715
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL R G + + Y L M T+ E+ T
Sbjct: 716 TYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YA-LLMESTSIEYVT 761
Score = 162 (62.1 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 623 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 682
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL R G
Sbjct: 683 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGI 740
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 741 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 799
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + + S L +++ G+F++ +A L L F
Sbjct: 800 LQEEGKLHMMKEKWWRGNGCPEEDNKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 853
Query: 763 VCGQF 767
G+F
Sbjct: 854 -IGEF 857
Score = 99 (39.9 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 56/242 (23%), Positives = 90/242 (37%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + A+
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYI--NLYPDYAAISRAI 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 162 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I +GM Y + T LD E +N
Sbjct: 218 EMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 276
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 277 MT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 332
Query: 237 HA 238
A
Sbjct: 333 IA 334
Score = 44 (20.5 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 276 GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPA-YDVLNIGGTGS---------------R 319
G +F+ + + GL+G I F+ L D++++ G+ +
Sbjct: 357 GPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWK 416
Query: 320 RIGYWSNYSGLSV 332
+IG W++ SGL++
Sbjct: 417 KIGIWNSNSGLNM 429
Score = 44 (20.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 470 MESGLVVVAPVQKLKSSPWA------FLKPFTIPMWLVTGGFF 506
ME G ++ P + + WA ++ P T P L GG F
Sbjct: 1 MEHGTLLAQPGLWTRDTSWALLYFLCYILPQTAPQVLRIGGIF 43
>UNIPROTKB|E9PD61 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00792018
ProteinModelPortal:E9PD61 SMR:E9PD61 Ensembl:ENST00000399913
UCSC:uc011acs.2 ArrayExpress:E9PD61 Bgee:E9PD61 Uniprot:E9PD61
Length = 920
Score = 179 (68.1 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 476 EGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 535
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 536 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 595
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 596 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 655
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 656 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 715
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL R G + + Y L M T+ E+ T
Sbjct: 716 TYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YA-LLMESTSIEYVT 761
Score = 162 (62.1 bits), Expect = 8.0e-13, Sum P(3) = 8.0e-13
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 623 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 682
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL R G
Sbjct: 683 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGI 740
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 741 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 799
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + + S L +++ G+F++ +A L L F
Sbjct: 800 LQEEGKLHMMKEKWWRGNGCPEEDNKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 853
Query: 763 VCGQF 767
G+F
Sbjct: 854 -IGEF 857
Score = 99 (39.9 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 56/242 (23%), Positives = 90/242 (37%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + A+
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYI--NLYPDYAAISRAI 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 162 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I +GM Y + T LD E +N
Sbjct: 218 EMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 276
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 277 MT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 332
Query: 237 HA 238
A
Sbjct: 333 IA 334
Score = 44 (20.5 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 276 GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPA-YDVLNIGGTGS---------------R 319
G +F+ + + GL+G I F+ L D++++ G+ +
Sbjct: 357 GPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWK 416
Query: 320 RIGYWSNYSGLSV 332
+IG W++ SGL++
Sbjct: 417 KIGIWNSNSGLNM 429
Score = 44 (20.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 470 MESGLVVVAPVQKLKSSPWA------FLKPFTIPMWLVTGGFF 506
ME G ++ P + + WA ++ P T P L GG F
Sbjct: 1 MEHGTLLAQPGLWTRDTSWALLYFLCYILPQTAPQVLRIGGIF 43
>UNIPROTKB|E7ENK3 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI00790860
ProteinModelPortal:E7ENK3 SMR:E7ENK3 Ensembl:ENST00000327783
OMA:KELIDHR ArrayExpress:E7ENK3 Bgee:E7ENK3 Uniprot:E7ENK3
Length = 949
Score = 179 (68.1 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 476 EGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 535
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 536 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 595
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 596 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 655
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 656 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 715
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL R G + + Y L M T+ E+ T
Sbjct: 716 TYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YA-LLMESTSIEYVT 761
Score = 162 (62.1 bits), Expect = 9.0e-13, Sum P(3) = 9.0e-13
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 623 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 682
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL R G
Sbjct: 683 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGI 740
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 741 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 799
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + + S L +++ G+F++ +A L L F
Sbjct: 800 LQEEGKLHMMKEKWWRGNGCPEEDNKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 853
Query: 763 VCGQF 767
G+F
Sbjct: 854 -IGEF 857
Score = 99 (39.9 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 56/242 (23%), Positives = 90/242 (37%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + A+
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYI--NLYPDYAAISRAI 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 162 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I +GM Y + T LD E +N
Sbjct: 218 EMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 276
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 277 MT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 332
Query: 237 HA 238
A
Sbjct: 333 IA 334
Score = 44 (20.5 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 16/73 (21%), Positives = 33/73 (45%)
Query: 276 GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPA-YDVLNIGGTGS---------------R 319
G +F+ + + GL+G I F+ L D++++ G+ +
Sbjct: 357 GPRFMNLIKEARWDGLTGHITFNKTNGLRKDFDLDIISLKEEGTEKAAGEVSKHLYKVWK 416
Query: 320 RIGYWSNYSGLSV 332
+IG W++ SGL++
Sbjct: 417 KIGIWNSNSGLNM 429
Score = 44 (20.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 470 MESGLVVVAPVQKLKSSPWA------FLKPFTIPMWLVTGGFF 506
ME G ++ P + + WA ++ P T P L GG F
Sbjct: 1 MEHGTLLAQPGLWTRDTSWALLYFLCYILPQTAPQVLRIGGIF 43
>UNIPROTKB|F6QCU7 [details] [associations]
symbol:GRIK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:DAAA02000152 EMBL:DAAA02000153
EMBL:DAAA02000154 EMBL:DAAA02000155 EMBL:DAAA02000156
EMBL:DAAA02000157 IPI:IPI00711099 Ensembl:ENSBTAT00000026817
Uniprot:F6QCU7
Length = 797
Score = 179 (68.1 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ +K D AV +TI
Sbjct: 352 EGYCLDLLKELSNILGFIYDVKLVADGKYGAQNDKGEWNGMVKELIDHKADLAVAPLTIT 411
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 412 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 471
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 472 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 531
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 532 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 591
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL + G + + Y L M T+ E+ T
Sbjct: 592 TYEKMWAFMSSRQQ--TALVKNSDEGIHRVLTTD--YA-LLMESTSIEYVT 637
Score = 99 (39.9 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 55/240 (22%), Positives = 94/240 (39%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 499 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 558
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL + G
Sbjct: 559 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVKNSDEGI 616
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAI-L 701
V A++ E IE ++++ NC +G G+G + AI L
Sbjct: 617 HRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGKKEHSKIKIAIIL 675
Query: 702 QLSENGDLQKIHNKWLT-YNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFF 760
++ + L W+ + A G G+++ ++ + LF I IFFF
Sbjct: 676 KIQKEKSLHFNQEYWIRGHGRPKSHQQEASGLGTKI-IRGVFFLFAKSLILKSTLSIFFF 734
Score = 98 (39.6 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 57/242 (23%), Positives = 89/242 (36%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + AV
Sbjct: 33 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNRDLFYI--NLYPDYAAISRAV 90
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 91 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 146
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I +GM Y + T LD E +N
Sbjct: 147 EMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 205
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P I +W + L+ +G + A YD+V++VA
Sbjct: 206 MT-GFRLLNIDNPHVSA---IIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 261
Query: 237 HA 238
A
Sbjct: 262 IA 263
Score = 42 (19.8 bits), Expect = 1.4e-14, Sum P(3) = 1.4e-14
Identities = 10/46 (21%), Positives = 22/46 (47%)
Query: 276 GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPA-YDVLNIGGTGSRR 320
G +F+ + + GL+G I F+ L D++++ G+ +
Sbjct: 286 GPRFMNLIKEAQWDGLTGRITFNKTDGLRKDFDLDIISLKEEGTEK 331
>UNIPROTKB|F8WEZ8 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0019228
"regulation of action potential in neuron" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0048169 "regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043204
GO:GO:0051402 GO:GO:0060079 GO:GO:0042734 GO:GO:0043195
GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 EMBL:AL109919
EMBL:AP002528 EMBL:AP002529 EMBL:AP002530 HGNC:HGNC:4580
IPI:IPI01012035 ProteinModelPortal:F8WEZ8 SMR:F8WEZ8
Ensembl:ENST00000369134 ArrayExpress:F8WEZ8 Bgee:F8WEZ8
Uniprot:F8WEZ8
Length = 859
Score = 171 (65.3 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 61/231 (26%), Positives = 106/231 (45%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYG-NGKRNPIYNDIVQQVALNKFDAAVGDITI 455
+GYCID+ +L + + YG N +N +V+++ +K D AV + I
Sbjct: 411 EGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAI 470
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ ++FL P + +W+ +L V V++
Sbjct: 471 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 530
Query: 515 ILEHRFNN-EFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXX 561
++ RF+ E+ P P +V T+ FWF + E +L R
Sbjct: 531 VIA-RFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 589
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 590 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGA 640
Score = 162 (62.1 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 62/244 (25%), Positives = 102/244 (41%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 559 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 618
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKG-- 646
I+ D L T+ G V+DG+ + ++ + + + + S+ + +G
Sbjct: 619 IDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQ-SVLVKSNEEGIQ 677
Query: 647 ---GGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQL 703
A + E IE F+++ NC +G G+G SP ++ AILQL
Sbjct: 678 RVLTSDYAFLMESTTIE-FVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQL 736
Query: 704 SENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRV 763
E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 737 QEEGKLHMMKEKWWRGNGCPEEESKE---ASALGVQNIGGIFIV--LAAGLVLSVFVA-- 789
Query: 764 CGQF 767
G+F
Sbjct: 790 VGEF 793
Score = 102 (41.0 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 79/337 (23%), Positives = 134/337 (39%)
Query: 6 VAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VAAI GP S A+ + + N L VP + S F + D+ + A+
Sbjct: 54 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQV--SDNKDSFYVSLYPDFSSLSRAI 111
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV+++ W+ V ++ DD G + L A S+ ++ + P ++ A L
Sbjct: 112 LDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKE 168
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
E V + + + I A ++GM Y +I T LD EP +N
Sbjct: 169 MKRGKEFHV-IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALD-VEPYRYSGVN 226
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L +T +T + + I +W + L+ SG + A YD+V
Sbjct: 227 MT-GFRIL--NTENTQVS-SIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAV---- 278
Query: 237 HALDALLNEGGKFTFSN-DPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
H + + + + T S+ H SL + + + L R+ F +G +
Sbjct: 279 HVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSL-IKEAHWEGLTG--RITFNKTNG-L 334
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
R D D DV+++ G +IG W SGL++
Sbjct: 335 RTDFD-------LDVISLKEEGLEKIGTWDPASGLNM 364
>UNIPROTKB|F1LP48 [details] [associations]
symbol:Grik2 "Glutamate receptor ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032983 "kainate selective glutamate receptor complex"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0042734 "presynaptic membrane" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048172 "regulation of short-term neuronal
synaptic plasticity" evidence=IEA] [GO:0050806 "positive regulation
of synaptic transmission" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524
GO:GO:0035249 GO:GO:0005622 GO:GO:0006874 GO:GO:0019228
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0050806 GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
IPI:IPI00324708 PRIDE:F1LP48 Ensembl:ENSRNOT00000000415
ArrayExpress:F1LP48 Uniprot:F1LP48
Length = 870
Score = 171 (65.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 60/231 (25%), Positives = 108/231 (46%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI---YNDIVQQVALNKFDAAVGDITI 455
+GYCID+ +L + + G G ++ + +N +V+++ +K D AV + I
Sbjct: 422 EGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAI 481
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ ++FL P + +W+ +L V V++
Sbjct: 482 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 541
Query: 515 ILEHRFNN-EFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXX 561
++ RF+ E+ P P +V T+ FWF + E +L R
Sbjct: 542 VIA-RFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 600
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 601 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGA 651
Score = 162 (62.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 62/244 (25%), Positives = 102/244 (41%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 570 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 629
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKG-- 646
I+ D L T+ G V+DG+ + ++ + + + + S+ + +G
Sbjct: 630 IDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQ-SVLVKSNEEGIQ 688
Query: 647 ---GGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQL 703
A + E IE F+++ NC +G G+G SP ++ AILQL
Sbjct: 689 RVLTSDYAFLMESTTIE-FVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQL 747
Query: 704 SENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRV 763
E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 748 QEEGKLHMMKEKWWRGNGCPEEESKE---ASALGVQNIGGIFIV--LAAGLVLSVFVA-- 800
Query: 764 CGQF 767
G+F
Sbjct: 801 VGEF 804
Score = 102 (41.0 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 79/337 (23%), Positives = 134/337 (39%)
Query: 6 VAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VAAI GP S A+ + + N L VP + S F + D+ + A+
Sbjct: 65 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQV--SDNKDSFYVSLYPDFSSLSRAI 122
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV+++ W+ V ++ DD G + L A S+ ++ + P ++ A L
Sbjct: 123 LDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKE 179
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
E V + + + I A ++GM Y +I T LD EP +N
Sbjct: 180 MKRGKEFHV-IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALD-VEPYRYSGVN 237
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L +T +T + + I +W + L+ SG + A YD+V
Sbjct: 238 MT-GFRIL--NTENTQVS-SIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAV---- 289
Query: 237 HALDALLNEGGKFTFSN-DPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
H + + + + T S+ H SL + + + L R+ F +G +
Sbjct: 290 HVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSL-IKEAHWEGLTG--RITFNKTNG-L 345
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
R D D DV+++ G +IG W SGL++
Sbjct: 346 RTDFD-------LDVISLKEEGLEKIGTWDPASGLNM 375
>UNIPROTKB|Q13002 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9606 "Homo sapiens" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0001662 "behavioral
fear response" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=IEA] [GO:0032983 "kainate selective glutamate
receptor complex" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IEA]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0015277 "kainate selective glutamate receptor
activity" evidence=IDA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IMP] [GO:0050804 "regulation
of synaptic transmission" evidence=IDA] [GO:0050806 "positive
regulation of synaptic transmission" evidence=IMP] [GO:0005887
"integral to plasma membrane" evidence=TAS] [GO:0006810 "transport"
evidence=NAS] [GO:0007215 "glutamate receptor signaling pathway"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007268 "synaptic transmission" evidence=TAS]
Reactome:REACT_13685 InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0005887 GO:GO:0051967 GO:GO:0007268 EMBL:CH471051
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 DrugBank:DB00142 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
Orphanet:88616 GO:GO:0050806 eggNOG:NOG316680 GO:GO:0005234
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 EMBL:U16126
EMBL:AJ252246 EMBL:AJ301608 EMBL:AJ301609 EMBL:AJ301610
EMBL:HM149335 EMBL:HM149336 EMBL:HM149337 EMBL:HM149338
EMBL:HM149339 EMBL:AL109919 EMBL:AP002528 EMBL:AP002529
EMBL:AP002530 IPI:IPI00011396 IPI:IPI00396613 IPI:IPI00642591
IPI:IPI00746275 IPI:IPI00815931 PIR:A54260 RefSeq:NP_001159719.1
RefSeq:NP_068775.1 RefSeq:NP_786944.1 UniGene:Hs.98262 PDB:3QXM
PDBsum:3QXM ProteinModelPortal:Q13002 SMR:Q13002 IntAct:Q13002
STRING:Q13002 PhosphoSite:Q13002 DMDM:2492627 PaxDb:Q13002
PRIDE:Q13002 DNASU:2898 Ensembl:ENST00000318991
Ensembl:ENST00000369137 Ensembl:ENST00000369138
Ensembl:ENST00000413795 Ensembl:ENST00000421544 GeneID:2898
KEGG:hsa:2898 UCSC:uc003pqn.3 UCSC:uc003pqo.4 UCSC:uc010kcw.3
CTD:2898 GeneCards:GC06P101846 H-InvDB:HIX0006094 HGNC:HGNC:4580
HPA:CAB022463 HPA:HPA014395 HPA:HPA014623 MIM:138244 MIM:611092
neXtProt:NX_Q13002 PharmGKB:PA164741600 InParanoid:Q13002 KO:K05202
OMA:VNGQWNG OrthoDB:EOG41C6VH PhylomeDB:Q13002 BindingDB:Q13002
ChEMBL:CHEMBL3683 GenomeRNAi:2898 NextBio:11469 ArrayExpress:Q13002
Bgee:Q13002 CleanEx:HS_GRIK2 Genevestigator:Q13002
GermOnline:ENSG00000164418 Uniprot:Q13002
Length = 908
Score = 171 (65.3 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 61/231 (26%), Positives = 106/231 (45%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYG-NGKRNPIYNDIVQQVALNKFDAAVGDITI 455
+GYCID+ +L + + YG N +N +V+++ +K D AV + I
Sbjct: 460 EGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAI 519
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ ++FL P + +W+ +L V V++
Sbjct: 520 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 579
Query: 515 ILEHRFNN-EFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXX 561
++ RF+ E+ P P +V T+ FWF + E +L R
Sbjct: 580 VIA-RFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 638
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 639 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGA 689
Score = 162 (62.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 62/244 (25%), Positives = 102/244 (41%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 608 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 667
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKG-- 646
I+ D L T+ G V+DG+ + ++ + + + + S+ + +G
Sbjct: 668 IDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQ-SVLVKSNEEGIQ 726
Query: 647 ---GGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQL 703
A + E IE F+++ NC +G G+G SP ++ AILQL
Sbjct: 727 RVLTSDYAFLMESTTIE-FVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQL 785
Query: 704 SENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRV 763
E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 786 QEEGKLHMMKEKWWRGNGCPEEESKE---ASALGVQNIGGIFIV--LAAGLVLSVFVA-- 838
Query: 764 CGQF 767
G+F
Sbjct: 839 VGEF 842
Score = 102 (41.0 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 79/337 (23%), Positives = 134/337 (39%)
Query: 6 VAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VAAI GP S A+ + + N L VP + S F + D+ + A+
Sbjct: 103 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQV--SDNKDSFYVSLYPDFSSLSRAI 160
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV+++ W+ V ++ DD G + L A S+ ++ + P ++ A L
Sbjct: 161 LDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKE 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
E V + + + I A ++GM Y +I T LD EP +N
Sbjct: 218 MKRGKEFHV-IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALD-VEPYRYSGVN 275
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L +T +T + + I +W + L+ SG + A YD+V
Sbjct: 276 MT-GFRIL--NTENTQVS-SIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAV---- 327
Query: 237 HALDALLNEGGKFTFSN-DPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
H + + + + T S+ H SL + + + L R+ F +G +
Sbjct: 328 HVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSL-IKEAHWEGLTG--RITFNKTNG-L 383
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
R D D DV+++ G +IG W SGL++
Sbjct: 384 RTDFD-------LDVISLKEEGLEKIGTWDPASGLNM 413
>MGI|MGI:95815 [details] [associations]
symbol:Grik2 "glutamate receptor, ionotropic, kainate 2 (beta
2)" species:10090 "Mus musculus" [GO:0001662 "behavioral fear
response" evidence=IMP] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IMP] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IDA] [GO:0007268
"synaptic transmission" evidence=ISO;IGI;IMP] [GO:0008066
"glutamate receptor activity" evidence=ISO] [GO:0008328 "ionotropic
glutamate receptor complex" evidence=ISO;IC] [GO:0015277 "kainate
selective glutamate receptor activity" evidence=ISO;IGI;IMP;IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=ISO] [GO:0031625
"ubiquitin protein ligase binding" evidence=ISO] [GO:0032839
"dendrite cytoplasm" evidence=ISO] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IPI] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI;IMP;IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IMP]
[GO:0042391 "regulation of membrane potential"
evidence=IGI;IMP;IDA] [GO:0042734 "presynaptic membrane"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0043113
"receptor clustering" evidence=ISO] [GO:0043195 "terminal bouton"
evidence=ISO] [GO:0043204 "perikaryon" evidence=ISO] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IGI]
[GO:0043525 "positive regulation of neuron apoptotic process"
evidence=ISO] [GO:0045202 "synapse" evidence=ISO;TAS] [GO:0045211
"postsynaptic membrane" evidence=IDA] [GO:0046328 "regulation of
JNK cascade" evidence=ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048172 "regulation
of short-term neuronal synaptic plasticity" evidence=ISO;IMP]
[GO:0050804 "regulation of synaptic transmission" evidence=ISO]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=ISO]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IGI] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=IGI;IMP]
[GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IGI;IMP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 MGI:MGI:95815 Pfam:PF01094
GO:GO:0006886 GO:GO:0016020 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0043204
GO:GO:0051402 GO:GO:0045202 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249
GO:GO:0005622 GO:GO:0006874 GO:GO:0019228 GO:GO:0043113
GO:GO:0032839 GO:GO:0046328 GO:GO:0001662 GO:GO:0048169
InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806 eggNOG:NOG316680
GO:GO:0008328 GO:GO:0005234 GO:GO:0004970 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
OrthoDB:EOG41C6VH EMBL:X66117 EMBL:D10054 EMBL:U31443 EMBL:AC113305
IPI:IPI00131566 IPI:IPI00223171 PIR:A43954 PIR:S35792
UniGene:Mm.332838 ProteinModelPortal:P39087 SMR:P39087
IntAct:P39087 STRING:P39087 PhosphoSite:P39087 PaxDb:P39087
PRIDE:P39087 Ensembl:ENSMUST00000079751 Ensembl:ENSMUST00000105484
Ensembl:ENSMUST00000105485 Ensembl:ENSMUST00000105487
GeneTree:ENSGT00590000083056 InParanoid:P39087 Bgee:P39087
Genevestigator:P39087 GermOnline:ENSMUSG00000056073 Uniprot:P39087
Length = 908
Score = 171 (65.3 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 60/231 (25%), Positives = 108/231 (46%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI---YNDIVQQVALNKFDAAVGDITI 455
+GYCID+ +L + + G G ++ + +N +V+++ +K D AV + I
Sbjct: 460 EGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAI 519
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ ++FL P + +W+ +L V V++
Sbjct: 520 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 579
Query: 515 ILEHRFNN-EFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXX 561
++ RF+ E+ P P +V T+ FWF + E +L R
Sbjct: 580 VIA-RFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 638
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 639 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGA 689
Score = 162 (62.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 62/244 (25%), Positives = 102/244 (41%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 608 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 667
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKG-- 646
I+ D L T+ G V+DG+ + ++ + + + + S+ + +G
Sbjct: 668 IDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQ-SVLVKSNEEGIQ 726
Query: 647 ---GGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQL 703
A + E IE F+++ NC +G G+G SP ++ AILQL
Sbjct: 727 RVLTSDYAFLMESTTIE-FVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQL 785
Query: 704 SENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRV 763
E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 786 QEEGKLHMMKEKWWRGNGCPEEESKE---ASALGVQNIGGIFIV--LAAGLVLSVFVA-- 838
Query: 764 CGQF 767
G+F
Sbjct: 839 VGEF 842
Score = 102 (41.0 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 79/337 (23%), Positives = 134/337 (39%)
Query: 6 VAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VAAI GP S A+ + + N L VP + S F + D+ + A+
Sbjct: 103 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQV--SDNKDSFYVSLYPDFSSLSRAI 160
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV+++ W+ V ++ DD G + L A S+ ++ + P ++ A L
Sbjct: 161 LDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKE 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
E V + + + I A ++GM Y +I T LD EP +N
Sbjct: 218 MKRGKEFHV-IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALD-VEPYRYSGVN 275
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L +T +T + + I +W + L+ SG + A YD+V
Sbjct: 276 MT-GFRIL--NTENTQVS-SIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAV---- 327
Query: 237 HALDALLNEGGKFTFSN-DPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
H + + + + T S+ H SL + + + L R+ F +G +
Sbjct: 328 HVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSL-IKEAHWEGLTG--RITFNKTNG-L 383
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
R D D DV+++ G +IG W SGL++
Sbjct: 384 RTDFD-------LDVISLKEEGLEKIGTWDPSSGLNM 413
>RGD|2733 [details] [associations]
symbol:Grik2 "glutamate receptor, ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=ISO] [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA;ISO;TAS] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISO] [GO:0006886 "intracellular protein transport"
evidence=ISO] [GO:0007268 "synaptic transmission" evidence=ISO;IMP]
[GO:0008066 "glutamate receptor activity" evidence=IDA] [GO:0008328
"ionotropic glutamate receptor complex" evidence=IDA] [GO:0015277
"kainate selective glutamate receptor activity" evidence=ISO;IDA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=ISO] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0030424 "axon"
evidence=IDA] [GO:0030425 "dendrite" evidence=IDA] [GO:0031624
"ubiquitin conjugating enzyme binding" evidence=IPI] [GO:0031625
"ubiquitin protein ligase binding" evidence=IPI] [GO:0032839
"dendrite cytoplasm" evidence=IDA] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=ISO] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;TAS] [GO:0035249
"synaptic transmission, glutamatergic" evidence=ISO] [GO:0042391
"regulation of membrane potential" evidence=ISO] [GO:0042734
"presynaptic membrane" evidence=ISO] [GO:0042802 "identical protein
binding" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043113 "receptor clustering" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=ISO] [GO:0043525 "positive regulation of neuron
apoptotic process" evidence=IMP] [GO:0045202 "synapse" evidence=IDA]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0046328
"regulation of JNK cascade" evidence=IMP] [GO:0048169 "regulation of
long-term neuronal synaptic plasticity" evidence=ISO] [GO:0048172
"regulation of short-term neuronal synaptic plasticity" evidence=ISO]
[GO:0050804 "regulation of synaptic transmission" evidence=ISO]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=ISO] [GO:0051402 "neuron apoptotic process" evidence=IMP]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISO;IDA] [GO:0060079 "regulation of
excitatory postsynaptic membrane potential" evidence=ISO] [GO:0060080
"regulation of inhibitory postsynaptic membrane potential"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886
GO:GO:0042803 GO:GO:0043525 GO:GO:0051967 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043204 GO:GO:0051402 GO:GO:0060079 GO:GO:0042734
GO:GO:0043195 GO:GO:0060080 GO:GO:0043524 GO:GO:0035249 GO:GO:0006874
GO:GO:0019228 GO:GO:0043113 GO:GO:0032839 GO:GO:0046328 GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2898 KO:K05202
OrthoDB:EOG41C6VH EMBL:Z11548 EMBL:Z11715 IPI:IPI00324708 PIR:S19098
RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y PDB:1S9T
PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR PDB:2XXT
PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F PDB:3G3G
PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H PDB:3QLT
PDB:3QLU PDB:3QLV PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T PDBsum:1SD3
PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C PDBsum:2XXR
PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW PDBsum:2XXX
PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H PDBsum:3G3I
PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H PDBsum:3QLT
PDBsum:3QLU PDBsum:3QLV ProteinModelPortal:P42260 SMR:P42260
DIP:DIP-29256N STRING:P42260 PhosphoSite:P42260 PRIDE:P42260
GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733 InParanoid:P42260
BindingDB:P42260 ChEMBL:CHEMBL3607 EvolutionaryTrace:P42260
NextBio:610770 ArrayExpress:P42260 Genevestigator:P42260
GermOnline:ENSRNOG00000000368 Uniprot:P42260
Length = 908
Score = 171 (65.3 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 60/231 (25%), Positives = 108/231 (46%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI---YNDIVQQVALNKFDAAVGDITI 455
+GYCID+ +L + + G G ++ + +N +V+++ +K D AV + I
Sbjct: 460 EGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAI 519
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ ++FL P + +W+ +L V V++
Sbjct: 520 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 579
Query: 515 ILEHRFNN-EFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXX 561
++ RF+ E+ P P +V T+ FWF + E +L R
Sbjct: 580 VIA-RFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 638
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 639 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGA 689
Score = 162 (62.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 62/244 (25%), Positives = 102/244 (41%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 608 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 667
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKG-- 646
I+ D L T+ G V+DG+ + ++ + + + + S+ + +G
Sbjct: 668 IDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQ-SVLVKSNEEGIQ 726
Query: 647 ---GGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQL 703
A + E IE F+++ NC +G G+G SP ++ AILQL
Sbjct: 727 RVLTSDYAFLMESTTIE-FVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQL 785
Query: 704 SENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRV 763
E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 786 QEEGKLHMMKEKWWRGNGCPEEESKE---ASALGVQNIGGIFIV--LAAGLVLSVFVA-- 838
Query: 764 CGQF 767
G+F
Sbjct: 839 VGEF 842
Score = 102 (41.0 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 79/337 (23%), Positives = 134/337 (39%)
Query: 6 VAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VAAI GP S A+ + + N L VP + S F + D+ + A+
Sbjct: 103 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQV--SDNKDSFYVSLYPDFSSLSRAI 160
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV+++ W+ V ++ DD G + L A S+ ++ + P ++ A L
Sbjct: 161 LDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKE 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
E V + + + I A ++GM Y +I T LD EP +N
Sbjct: 218 MKRGKEFHV-IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALD-VEPYRYSGVN 275
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L +T +T + + I +W + L+ SG + A YD+V
Sbjct: 276 MT-GFRIL--NTENTQVS-SIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAV---- 327
Query: 237 HALDALLNEGGKFTFSN-DPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
H + + + + T S+ H SL + + + L R+ F +G +
Sbjct: 328 HVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSL-IKEAHWEGLTG--RITFNKTNG-L 383
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
R D D DV+++ G +IG W SGL++
Sbjct: 384 RTDFD-------LDVISLKEEGLEKIGTWDPASGLNM 413
>UNIPROTKB|P42260 [details] [associations]
symbol:Grik2 "Glutamate receptor ionotropic, kainate 2"
species:10116 "Rattus norvegicus" [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030165 "PDZ domain
binding" evidence=IPI] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2733 GO:GO:0006886
GO:GO:0042803 GO:GO:0043525 GO:GO:0051967 GO:GO:0007268
GO:GO:0030054 GO:GO:0045211 GO:GO:0043204 GO:GO:0051402
GO:GO:0060079 GO:GO:0042734 GO:GO:0043195 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0006874 GO:GO:0019228
GO:GO:0043113 GO:GO:0032839 GO:GO:0046328 GO:GO:0001662
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
eggNOG:NOG316680 GO:GO:0008328 GO:GO:0005234 HOGENOM:HOG000234371
HOVERGEN:HBG051839 GO:GO:0015277 GO:GO:0032983 CTD:2898 KO:K05202
OrthoDB:EOG41C6VH EMBL:Z11548 EMBL:Z11715 IPI:IPI00324708
PIR:S19098 RefSeq:NP_062182.1 UniGene:Rn.87696 PDB:1S50 PDB:1S7Y
PDB:1S9T PDB:1SD3 PDB:1TT1 PDB:1YAE PDB:2I0B PDB:2I0C PDB:2XXR
PDB:2XXT PDB:2XXU PDB:2XXV PDB:2XXW PDB:2XXX PDB:2XXY PDB:3G3F
PDB:3G3G PDB:3G3H PDB:3G3I PDB:3G3J PDB:3G3K PDB:3H6G PDB:3H6H
PDB:3QLT PDB:3QLU PDB:3QLV PDBsum:1S50 PDBsum:1S7Y PDBsum:1S9T
PDBsum:1SD3 PDBsum:1TT1 PDBsum:1YAE PDBsum:2I0B PDBsum:2I0C
PDBsum:2XXR PDBsum:2XXT PDBsum:2XXU PDBsum:2XXV PDBsum:2XXW
PDBsum:2XXX PDBsum:2XXY PDBsum:3G3F PDBsum:3G3G PDBsum:3G3H
PDBsum:3G3I PDBsum:3G3J PDBsum:3G3K PDBsum:3H6G PDBsum:3H6H
PDBsum:3QLT PDBsum:3QLU PDBsum:3QLV ProteinModelPortal:P42260
SMR:P42260 DIP:DIP-29256N STRING:P42260 PhosphoSite:P42260
PRIDE:P42260 GeneID:54257 KEGG:rno:54257 UCSC:RGD:2733
InParanoid:P42260 BindingDB:P42260 ChEMBL:CHEMBL3607
EvolutionaryTrace:P42260 NextBio:610770 ArrayExpress:P42260
Genevestigator:P42260 GermOnline:ENSRNOG00000000368 Uniprot:P42260
Length = 908
Score = 171 (65.3 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 60/231 (25%), Positives = 108/231 (46%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI---YNDIVQQVALNKFDAAVGDITI 455
+GYCID+ +L + + G G ++ + +N +V+++ +K D AV + I
Sbjct: 460 EGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDVNGQWNGMVRELIDHKADLAVAPLAI 519
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ ++FL P + +W+ +L V V++
Sbjct: 520 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 579
Query: 515 ILEHRFNN-EFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXX 561
++ RF+ E+ P P +V T+ FWF + E +L R
Sbjct: 580 VIA-RFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 638
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 639 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGA 689
Score = 162 (62.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 62/244 (25%), Positives = 102/244 (41%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 608 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 667
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKG-- 646
I+ D L T+ G V+DG+ + ++ + + + + S+ + +G
Sbjct: 668 IDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQ-SVLVKSNEEGIQ 726
Query: 647 ---GGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQL 703
A + E IE F+++ NC +G G+G SP ++ AILQL
Sbjct: 727 RVLTSDYAFLMESTTIE-FVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQL 785
Query: 704 SENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRV 763
E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 786 QEEGKLHMMKEKWWRGNGCPEEESKE---ASALGVQNIGGIFIV--LAAGLVLSVFVA-- 838
Query: 764 CGQF 767
G+F
Sbjct: 839 VGEF 842
Score = 102 (41.0 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 79/337 (23%), Positives = 134/337 (39%)
Query: 6 VAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VAAI GP S A+ + + N L VP + S F + D+ + A+
Sbjct: 103 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQV--SDNKDSFYVSLYPDFSSLSRAI 160
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV+++ W+ V ++ DD G + L A S+ ++ + P ++ A L
Sbjct: 161 LDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKE 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
E V + + + I A ++GM Y +I T LD EP +N
Sbjct: 218 MKRGKEFHV-IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALD-VEPYRYSGVN 275
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L +T +T + + I +W + L+ SG + A YD+V
Sbjct: 276 MT-GFRIL--NTENTQVS-SIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAV---- 327
Query: 237 HALDALLNEGGKFTFSN-DPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
H + + + + T S+ H SL + + + L R+ F +G +
Sbjct: 328 HVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSL-IKEAHWEGLTG--RITFNKTNG-L 383
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
R D D DV+++ G +IG W SGL++
Sbjct: 384 RTDFD-------LDVISLKEEGLEKIGTWDPASGLNM 413
>UNIPROTKB|F8W7X3 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI01010383
ProteinModelPortal:F8W7X3 SMR:F8W7X3 PRIDE:F8W7X3
Ensembl:ENST00000309434 PhylomeDB:F8W7X3 ArrayExpress:F8W7X3
Bgee:F8W7X3 Uniprot:F8W7X3
Length = 920
Score = 179 (68.1 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 478 EGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 537
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 538 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 597
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 598 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 657
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 658 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 717
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL R G + + Y L M T+ E+ T
Sbjct: 718 TYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YA-LLMESTSIEYVT 763
Score = 162 (62.1 bits), Expect = 2.0e-12, Sum P(3) = 2.0e-12
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 625 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 684
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL R G
Sbjct: 685 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGI 742
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 743 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 801
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + + S L +++ G+F++ +A L L F
Sbjct: 802 LQEEGKLHMMKEKWWRGNGCPEEDNKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 855
Query: 763 VCGQF 767
G+F
Sbjct: 856 -IGEF 859
Score = 99 (39.9 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 56/242 (23%), Positives = 90/242 (37%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + A+
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYI--NLYPDYAAISRAI 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 162 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I +GM Y + T LD E +N
Sbjct: 218 EMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 276
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 277 MT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 332
Query: 237 HA 238
A
Sbjct: 333 IA 334
Score = 44 (20.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 470 MESGLVVVAPVQKLKSSPWA------FLKPFTIPMWLVTGGFF 506
ME G ++ P + + WA ++ P T P L GG F
Sbjct: 1 MEHGTLLAQPGLWTRDTSWALLYFLCYILPQTAPQVLRIGGIF 43
Score = 40 (19.1 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 6/14 (42%), Positives = 12/14 (85%)
Query: 319 RRIGYWSNYSGLSV 332
++IG W++ SGL++
Sbjct: 418 KKIGIWNSNSGLNM 431
>UNIPROTKB|F5H1W5 [details] [associations]
symbol:GRIK1 "Glutamate receptor ionotropic, kainate 1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HGNC:HGNC:4579 EMBL:AP000238
EMBL:AP000239 EMBL:AP000236 EMBL:AP000237 IPI:IPI01013593
ProteinModelPortal:F5H1W5 SMR:F5H1W5 Ensembl:ENST00000535441
ArrayExpress:F5H1W5 Bgee:F5H1W5 Uniprot:F5H1W5
Length = 922
Score = 179 (68.1 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 71/291 (24%), Positives = 128/291 (43%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI--YNDIVQQVALNKFDAAVGDITIV 456
+GYC+D+ + N+L + + G G +N +N +V+++ ++ D AV +TI
Sbjct: 478 EGYCLDLLKELSNILGFIYDVKLVPDGKYGAQNDKGEWNGMVKELIDHRADLAVAPLTIT 537
Query: 457 TNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVWI 515
R K++DF++P+M G+ ++ ++FL P + +W+ L V V+++
Sbjct: 538 YVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFV 597
Query: 516 LEHRFNNEFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXXXX 563
+ E+ P P +V T+ FWF + E +L R
Sbjct: 598 IARFTPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGGIW 657
Query: 564 XXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGSFAWNYLVDELK 621
SSYTA+L + LTV+++ S I+ D L T+ G V+DGS + ++
Sbjct: 658 WFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSKIS 717
Query: 622 IAESRLVKLKNMEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRT 672
E + + ++ AL R G + + Y L M T+ E+ T
Sbjct: 718 TYEKMWAFMSSRQQ--TALVRNSDEGIQRVLTTD--YA-LLMESTSIEYVT 763
Score = 162 (62.1 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 65/245 (26%), Positives = 104/245 (42%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 625 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 684
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKGG- 647
I+ D L T+ G V+DGS + ++ E + + ++ AL R G
Sbjct: 685 IDSADDLAKQTKIEYGAVRDGSTMTFFKKSKISTYEKMWAFMSSRQQ--TALVRNSDEGI 742
Query: 648 -GVA----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQ 702
V A++ E IE ++++ NC +G G+G SP ++ AILQ
Sbjct: 743 QRVLTTDYALLMESTSIE-YVTQRNCNLTQIGGLIDSKGYGVGTPIGSPYRDKITIAILQ 801
Query: 703 LSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCR 762
L E G L + KW N C + + S L +++ G+F++ +A L L F
Sbjct: 802 LQEEGKLHMMKEKWWRGNGCPEEDNKE---ASALGVENIGGIFIV--LAAGLVLSVFVA- 855
Query: 763 VCGQF 767
G+F
Sbjct: 856 -IGEF 859
Score = 99 (39.9 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 56/242 (23%), Positives = 90/242 (37%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
V A GP S + + N L VP + P++ + Y DY + A+
Sbjct: 104 VAALFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDLFYI--NLYPDYAAISRAI 161
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV YY W+ V ++ +D G + L A S+ KI + P ++ A LL
Sbjct: 162 LDLVLYYNWKTVTVVY-EDSTGLIRLQELIKAPSRYNIKIKIRQ--LPSGNKDA-KPLLK 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
+ + + +T I +GM Y + T LD E +N
Sbjct: 218 EMKKGKEFYVIFDCSHETAAEILKQILFMGMMTEYYHYFFTTLDLFALD-LELYRYSGVN 276
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L P + I +W + L+ +G + A YD+V++VA
Sbjct: 277 MT-GFRLLNIDNPHVS---SIIEKWSMERLQAPPRPETGLLDGMMTTEAALMYDAVYMVA 332
Query: 237 HA 238
A
Sbjct: 333 IA 334
Score = 44 (20.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 470 MESGLVVVAPVQKLKSSPWA------FLKPFTIPMWLVTGGFF 506
ME G ++ P + + WA ++ P T P L GG F
Sbjct: 1 MEHGTLLAQPGLWTRDTSWALLYFLCYILPQTAPQVLRIGGIF 43
Score = 40 (19.1 bits), Expect = 3.1e-14, Sum P(3) = 3.1e-14
Identities = 6/14 (42%), Positives = 12/14 (85%)
Query: 319 RRIGYWSNYSGLSV 332
++IG W++ SGL++
Sbjct: 418 KKIGIWNSNSGLNM 431
>UNIPROTKB|F1N983 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00820777 Ensembl:ENSGALT00000036433 Uniprot:F1N983
Length = 240
Score = 194 (73.4 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 65/201 (32%), Positives = 93/201 (46%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVK 629
SSYTA+L + LTV+++ S IE + L TE G D GS + ++ + E
Sbjct: 10 SSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTY 69
Query: 630 LKNMEEYSIA------LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWG 683
+K+ E +AR K G A + E E + C+ VG G+G
Sbjct: 70 MKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYG 129
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFW 742
A + SPL ++ A+L+LSE G L K+ NKW EC S + S LSL +
Sbjct: 130 VATPKGSPLRTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVA 189
Query: 743 GLFLIC----GIACFLALIFF 759
G+F I G+A +ALI F
Sbjct: 190 GVFYILVGGLGLAMLVALIEF 210
>UNIPROTKB|F1N987 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001638
Pfam:PF00060 Pfam:PF00497 SMART:SM00079 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GeneTree:ENSGT00590000082809 GO:GO:0005234 GO:GO:0004970
EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00576871 Ensembl:ENSGALT00000036430 Uniprot:F1N987
Length = 227
Score = 194 (73.4 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 65/201 (32%), Positives = 93/201 (46%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVK 629
SSYTA+L + LTV+++ S IE + L TE G D GS + ++ + E
Sbjct: 10 SSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTY 69
Query: 630 LKNMEEYSIA------LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWG 683
+K+ E +AR K G A + E E + C+ VG G+G
Sbjct: 70 MKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYG 129
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFW 742
A + SPL ++ A+L+LSE G L K+ NKW EC S + S LSL +
Sbjct: 130 VATPKGSPLRTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVA 189
Query: 743 GLFLIC----GIACFLALIFF 759
G+F I G+A +ALI F
Sbjct: 190 GVFYILVGGLGLAMLVALIEF 210
>UNIPROTKB|J9P9T9 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 EMBL:AAEX03006305
EMBL:AAEX03006306 Ensembl:ENSCAFT00000044880 Uniprot:J9P9T9
Length = 1180
Score = 186 (70.5 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 59/242 (24%), Positives = 112/242 (46%)
Query: 370 PNNGMPLRIAVPNRVSYNEFVAKDKSPPG---VKGYCIDVFEAAVNLLPYPVPHNYIMYG 426
P G + VP R N + D +P KG+CID+ + ++ + + G
Sbjct: 421 PGTGGCVPNTVPCRRQSNHTFSGDTAPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTNG 480
Query: 427 -NGKR-NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKLK 484
+GKR ++N ++ +V + D A+G +TI R+++VDF+ P++E+G+ V+
Sbjct: 481 KHGKRVRGVWNGMIGEVYYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGT 540
Query: 485 SSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEFR-----GPPSQQLVT 534
SP AFL+P++ +W++ L V A+ V++ E+ +N G PS +
Sbjct: 541 VSPSAFLEPYSPSVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKKSGGPSFTIGK 600
Query: 535 IFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIE 592
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 601 SVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVS 660
Query: 593 GI 594
G+
Sbjct: 661 GL 662
Score = 131 (51.2 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 72/300 (24%), Positives = 129/300 (43%)
Query: 477 VAPVQKLKS-SPWAFLKPFTIPMWLVTGGFFLF-VGAVVWILEHRFNNEFRGPPSQQLVT 534
V+P L+ SP ++ F + + +V F+F + V ++ + + G PS +
Sbjct: 541 VSPSAFLEPYSPSVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKKSGGPSFTIGK 600
Query: 535 IFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIE 592
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 601 SVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVS 660
Query: 593 GI-DSLISSTE---P---IG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGP 644
G+ D + P G V +GS N + + + +VK N AL
Sbjct: 661 GLSDKKFQRPQDQYPPFRFGTVPNGSTERN-IRSNYRDMHTHMVKF-NQRSVEDALT-SL 717
Query: 645 KGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKSGWGFAFQRDS--PLAIDLSTA 699
K G + A + + + K C+ T+G + F +G+G A Q+DS AIDL A
Sbjct: 718 KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDL--A 775
Query: 700 ILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFF 759
+LQ +G+ QK+ WL+ C + + S+L + + G+F + +A LAL+ F
Sbjct: 776 LLQFLGDGETQKLETVWLS-GICQNEKNEVMS--SKLDIDNMAGVFYMLLVAMGLALLVF 832
Score = 89 (36.4 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 37/172 (21%), Positives = 73/172 (42%)
Query: 13 SSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYP--YFLRTTQSDYYQMHAVADLVEYY 70
+ +A ++ + ++ +VP+LS + + + P FL+ S Q+ + ++E Y
Sbjct: 101 TEAVAQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 71 GWREVIAIFVDDDYGR----NGISVLGDA--LSKKRAKISYKAPFSPGASRSAINSLLVG 124
W A+ G G+ DA LS + + PG R+ LL
Sbjct: 161 DW-SAFAVITSLHPGHALFLEGVRAAADASYLSWRLLDV-LTLELGPGGQRAHTQRLL-- 216
Query: 125 ANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSV-LDSTE 175
+++ V V + + + +F+ A G+ +VW+ +PS+ L ST+
Sbjct: 217 -RQLDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWL----VPSLALGSTD 263
Score = 46 (21.3 bits), Expect = 3.6e-14, Sum P(3) = 3.6e-14
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 342 PPNSSSNRHLYSVIWPG-EITATPRGWV 368
P + RHL +V W G + + +P G++
Sbjct: 326 PAREAFYRHLLNVTWEGRDFSFSPGGYL 353
Score = 39 (18.8 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 106 KAPFSPGASRS---AINSLLVGANLMESRVFVVHVNPDTG 142
K P P S S ++S + +E R FV+ +PD G
Sbjct: 383 KYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPDPG 422
>UNIPROTKB|E2RG96 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 OMA:CTWRRIS
EMBL:AAEX03006305 EMBL:AAEX03006306 Ensembl:ENSCAFT00000007441
Uniprot:E2RG96
Length = 1220
Score = 186 (70.5 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 60/243 (24%), Positives = 114/243 (46%)
Query: 370 PNNGMPLRIAVP-NRVSYNEFVAKDKSPPG---VKGYCIDVFEAAVNLLPYPVPHNYIMY 425
P G + VP R S + F + D +P KG+CID+ + ++ + +
Sbjct: 421 PGTGGCVPNTVPCRRQSNHTFSSGDTAPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTN 480
Query: 426 G-NGKR-NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKL 483
G +GKR ++N ++ +V + D A+G +TI R+++VDF+ P++E+G+ V+
Sbjct: 481 GKHGKRVRGVWNGMIGEVYYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNG 540
Query: 484 KSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEFR-----GPPSQQLV 533
SP AFL+P++ +W++ L V A+ V++ E+ +N G PS +
Sbjct: 541 TVSPSAFLEPYSPSVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKKSGGPSFTIG 600
Query: 534 TIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQI 591
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 601 KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV 660
Query: 592 EGI 594
G+
Sbjct: 661 SGL 663
Score = 131 (51.2 bits), Expect = 2.6e-08, Sum P(3) = 2.6e-08
Identities = 72/300 (24%), Positives = 129/300 (43%)
Query: 477 VAPVQKLKS-SPWAFLKPFTIPMWLVTGGFFLF-VGAVVWILEHRFNNEFRGPPSQQLVT 534
V+P L+ SP ++ F + + +V F+F + V ++ + + G PS +
Sbjct: 542 VSPSAFLEPYSPSVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKKSGGPSFTIGK 601
Query: 535 IFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIE 592
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 602 SVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVS 661
Query: 593 GI-DSLISSTE---P---IG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGP 644
G+ D + P G V +GS N + + + +VK N AL
Sbjct: 662 GLSDKKFQRPQDQYPPFRFGTVPNGSTERN-IRSNYRDMHTHMVKF-NQRSVEDALT-SL 718
Query: 645 KGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKSGWGFAFQRDS--PLAIDLSTA 699
K G + A + + + K C+ T+G + F +G+G A Q+DS AIDL A
Sbjct: 719 KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDL--A 776
Query: 700 ILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFF 759
+LQ +G+ QK+ WL+ C + + S+L + + G+F + +A LAL+ F
Sbjct: 777 LLQFLGDGETQKLETVWLS-GICQNEKNEVMS--SKLDIDNMAGVFYMLLVAMGLALLVF 833
Score = 89 (36.4 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 37/172 (21%), Positives = 73/172 (42%)
Query: 13 SSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYP--YFLRTTQSDYYQMHAVADLVEYY 70
+ +A ++ + ++ +VP+LS + + + P FL+ S Q+ + ++E Y
Sbjct: 101 TEAVAQILDFISSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 71 GWREVIAIFVDDDYGR----NGISVLGDA--LSKKRAKISYKAPFSPGASRSAINSLLVG 124
W A+ G G+ DA LS + + PG R+ LL
Sbjct: 161 DW-SAFAVITSLHPGHALFLEGVRAAADASYLSWRLLDV-LTLELGPGGQRAHTQRLL-- 216
Query: 125 ANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSV-LDSTE 175
+++ V V + + + +F+ A G+ +VW+ +PS+ L ST+
Sbjct: 217 -RQLDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWL----VPSLALGSTD 263
Score = 46 (21.3 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 342 PPNSSSNRHLYSVIWPG-EITATPRGWV 368
P + RHL +V W G + + +P G++
Sbjct: 326 PAREAFYRHLLNVTWEGRDFSFSPGGYL 353
Score = 39 (18.8 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 106 KAPFSPGASRS---AINSLLVGANLMESRVFVVHVNPDTG 142
K P P S S ++S + +E R FV+ +PD G
Sbjct: 383 KYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPDPG 422
>MGI|MGI:95808 [details] [associations]
symbol:Gria1 "glutamate receptor, ionotropic, AMPA1 (alpha 1)"
species:10090 "Mus musculus" [GO:0001919 "regulation of receptor
recycling" evidence=ISO] [GO:0001965 "G-protein alpha-subunit
binding" evidence=ISO] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=ISO] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005829
"cytosol" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IGI] [GO:0007616 "long-term memory" evidence=ISO;IMP]
[GO:0008021 "synaptic vesicle" evidence=IDA] [GO:0008179 "adenylate
cyclase binding" evidence=ISO] [GO:0008328 "ionotropic glutamate
receptor complex" evidence=IDA] [GO:0009636 "response to toxic
substance" evidence=ISO] [GO:0009986 "cell surface" evidence=IDA]
[GO:0014069 "postsynaptic density" evidence=ISO;IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019228 "regulation of action potential in
neuron" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=ISO] [GO:0030425 "dendrite"
evidence=IDA] [GO:0031267 "small GTPase binding" evidence=ISO]
[GO:0031489 "myosin V binding" evidence=ISO] [GO:0031594
"neuromuscular junction" evidence=ISO] [GO:0031623 "receptor
internalization" evidence=ISO;IMP] [GO:0031681 "G-protein
beta-subunit binding" evidence=ISO] [GO:0031698 "beta-2 adrenergic
receptor binding" evidence=ISO] [GO:0032279 "asymmetric synapse"
evidence=ISO] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0032590 "dendrite
membrane" evidence=IDA] [GO:0035235 "ionotropic glutamate receptor
signaling pathway" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043005 "neuron projection" evidence=ISO;IDA]
[GO:0043025 "neuronal cell body" evidence=ISO;IDA] [GO:0043197
"dendritic spine" evidence=ISO;IDA] [GO:0043198 "dendritic shaft"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0044309 "neuron spine" evidence=ISO;IDA] [GO:0045202 "synapse"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0045838 "positive regulation of membrane potential"
evidence=ISO] [GO:0048167 "regulation of synaptic plasticity"
evidence=ISO] [GO:0050804 "regulation of synaptic transmission"
evidence=ISO] [GO:0050806 "positive regulation of synaptic
transmission" evidence=ISO] [GO:0051018 "protein kinase A binding"
evidence=ISO] [GO:0060076 "excitatory synapse" evidence=ISO]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95808 GO:GO:0014069
GO:GO:0009986 GO:GO:0005789 GO:GO:0007268 GO:GO:0030054
GO:GO:0045211 GO:GO:0043025 GO:GO:0008021 GO:GO:0007616
GO:GO:0032281 GO:GO:0031623 GO:GO:0032590 InterPro:IPR001828
eggNOG:NOG316680 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 HOGENOM:HOG000234372 CTD:2890 HOVERGEN:HBG051839
KO:K05197 EMBL:X57497 IPI:IPI00136965 PIR:S12874
RefSeq:NP_001106796.1 UniGene:Mm.4920 ProteinModelPortal:P23818
SMR:P23818 DIP:DIP-31970N IntAct:P23818 MINT:MINT-1897734
STRING:P23818 PhosphoSite:P23818 PaxDb:P23818 PRIDE:P23818
Ensembl:ENSMUST00000036315 GeneID:14799 KEGG:mmu:14799
UCSC:uc007izs.2 InParanoid:P23818 OMA:ARIMQQW BindingDB:P23818
ChEMBL:CHEMBL3502 ChiTaRS:GRIA1 NextBio:286953 Bgee:P23818
CleanEx:MM_GRIA1 Genevestigator:P23818
GermOnline:ENSMUSG00000020524 Uniprot:P23818
Length = 907
Score = 189 (71.6 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 387 NEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVA 442
N+F D+ +GYC+++ + Y + G G R+P +N +V ++
Sbjct: 427 NQFEGNDR----YEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELV 482
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLV 501
+ D AV +TI R +++DF++P+M G+ +++ QK K ++FL P +W+
Sbjct: 483 YGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMC 542
Query: 502 TGGFFLFVG-AVVWILEHRFN------NEFR-G---PPSQQ-----LVTIFWFSFSTMFF 545
F ++G +VV L RF+ EF G S Q + WFS
Sbjct: 543 I--VFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 600
Query: 546 SHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
+ + SL GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 601 QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 658
Score = 177 (67.4 bits), Expect = 7.9e-13, Sum P(3) = 7.9e-13
Identities = 68/237 (28%), Positives = 101/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 592 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 651
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 652 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+LSE G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRGPVNLAVLKLSEQG 771
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ +KW EC S + S LSL + G+F I G+A +ALI F
Sbjct: 772 VLDKLKSKWWYDKGECGSKDSGSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEF 828
Score = 79 (32.9 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 23/79 (29%), Positives = 33/79 (41%)
Query: 276 GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAP 335
G + L ++ F GL+G ++F+ N V+ + G R+IGYW N V A
Sbjct: 334 GIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW-NEDDKFVPAA 392
Query: 336 EILYTKPPNSSSNRHLYSV 354
NSS Y V
Sbjct: 393 TDAQAGGDNSSVQNRTYIV 411
Score = 48 (22.0 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P TS Q+ LR + A+ ++++Y W+ + I+ D D G + + + D ++
Sbjct: 114 PVDTSNQFVLQLRPELQE-----ALISIIDHYKWQTFVYIY-DADRGLSVLQRVLDTAAE 167
Query: 99 KRAKIS 104
K +++
Sbjct: 168 KNWQVT 173
>RGD|621531 [details] [associations]
symbol:Gria1 "glutamate receptor, ionotropic, AMPA 1"
species:10116 "Rattus norvegicus" [GO:0001919 "regulation of
receptor recycling" evidence=IMP] [GO:0001965 "G-protein
alpha-subunit binding" evidence=IPI] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=ISO;IDA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005769 "early
endosome" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO;IDA] [GO:0007268
"synaptic transmission" evidence=ISO] [GO:0007616 "long-term
memory" evidence=ISO;IMP] [GO:0008021 "synaptic vesicle"
evidence=ISO] [GO:0008179 "adenylate cyclase binding" evidence=IDA]
[GO:0008328 "ionotropic glutamate receptor complex"
evidence=ISO;TAS] [GO:0009636 "response to toxic substance"
evidence=IMP] [GO:0009986 "cell surface" evidence=ISO] [GO:0010226
"response to lithium ion" evidence=IEP] [GO:0014069 "postsynaptic
density" evidence=ISO;IDA] [GO:0014070 "response to organic cyclic
compound" evidence=IEP] [GO:0016020 "membrane" evidence=ISO]
[GO:0019228 "regulation of action potential in neuron"
evidence=IMP] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0019904 "protein domain specific binding" evidence=IPI]
[GO:0021510 "spinal cord development" evidence=IEP] [GO:0030054
"cell junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0030425 "dendrite" evidence=ISO;ISS]
[GO:0031267 "small GTPase binding" evidence=IPI] [GO:0031489
"myosin V binding" evidence=IPI] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0031623 "receptor internalization"
evidence=ISO;IDA] [GO:0031681 "G-protein beta-subunit binding"
evidence=IDA] [GO:0031698 "beta-2 adrenergic receptor binding"
evidence=IPI] [GO:0032279 "asymmetric synapse" evidence=IDA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=ISO;IDA]
[GO:0032355 "response to estradiol stimulus" evidence=IEP]
[GO:0032590 "dendrite membrane" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=IDA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=NAS]
[GO:0042220 "response to cocaine" evidence=IEP] [GO:0042493
"response to drug" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=TAS] [GO:0043005 "neuron
projection" evidence=ISO;IDA] [GO:0043025 "neuronal cell body"
evidence=ISO;IDA] [GO:0043197 "dendritic spine" evidence=ISO;IDA]
[GO:0043198 "dendritic shaft" evidence=IDA] [GO:0043234 "protein
complex" evidence=IDA] [GO:0043434 "response to peptide hormone
stimulus" evidence=IEP] [GO:0044309 "neuron spine"
evidence=ISO;IDA] [GO:0045202 "synapse" evidence=IDA;IMP]
[GO:0045211 "postsynaptic membrane" evidence=IEA;ISO] [GO:0045838
"positive regulation of membrane potential" evidence=IMP]
[GO:0046685 "response to arsenic-containing substance"
evidence=IEP] [GO:0048167 "regulation of synaptic plasticity"
evidence=NAS;IMP] [GO:0050804 "regulation of synaptic transmission"
evidence=IDA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IMP] [GO:0051018 "protein kinase A binding"
evidence=IDA] [GO:0051602 "response to electrical stimulus"
evidence=IEP] [GO:0060076 "excitatory synapse" evidence=IDA]
[GO:0060992 "response to fungicide" evidence=IEP] [GO:0071230
"cellular response to amino acid stimulus" evidence=IEP]
[GO:0071359 "cellular response to dsRNA" evidence=IEP] [GO:0071363
"cellular response to growth factor stimulus" evidence=IEP]
[GO:0071375 "cellular response to peptide hormone stimulus"
evidence=IEP] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] [GO:0071418 "cellular response to amine
stimulus" evidence=IEP] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621531
GO:GO:0005829 GO:GO:0048167 GO:GO:0042803 GO:GO:0014069
GO:GO:0071363 GO:GO:0005789 GO:GO:0046685 GO:GO:0042493
GO:GO:0032355 GO:GO:0060992 GO:GO:0010226 GO:GO:0042220
GO:GO:0043198 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0051602 GO:GO:0031594 GO:GO:0007616 GO:GO:0032279
GO:GO:0035249 GO:GO:0030288 GO:GO:0032281 GO:GO:0031623
GO:GO:0001919 GO:GO:0019228 GO:GO:0008179 GO:GO:0051018
GO:GO:0021510 GO:GO:0005769 GO:GO:0045838 InterPro:IPR001828
GO:GO:0071375 GO:GO:0060076 GO:GO:0071418 GO:GO:0071230
GO:GO:0050806 PDB:2AWW PDBsum:2AWW GO:GO:0031681 GO:GO:0004971
GO:GO:0005234 CTD:2890 HOVERGEN:HBG051839 KO:K05197 EMBL:X17184
EMBL:M36418 EMBL:M38060 IPI:IPI00231012 IPI:IPI00324555 PIR:A40170
PIR:S07059 RefSeq:NP_113796.1 UniGene:Rn.29971 PDB:3SAJ PDBsum:3SAJ
ProteinModelPortal:P19490 SMR:P19490 DIP:DIP-30929N IntAct:P19490
MINT:MINT-726538 TCDB:1.A.10.1.1 PhosphoSite:P19490 PRIDE:P19490
GeneID:50592 KEGG:rno:50592 UCSC:RGD:621531 BindingDB:P19490
ChEMBL:CHEMBL3753 EvolutionaryTrace:P19490 NextBio:610434
Genevestigator:P19490 GO:GO:0071359 Uniprot:P19490
Length = 907
Score = 189 (71.6 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 387 NEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVA 442
N+F D+ +GYC+++ + Y + G G R+P +N +V ++
Sbjct: 427 NQFEGNDR----YEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELV 482
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLV 501
+ D AV +TI R +++DF++P+M G+ +++ QK K ++FL P +W+
Sbjct: 483 YGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMC 542
Query: 502 TGGFFLFVG-AVVWILEHRFN------NEFR-G---PPSQQ-----LVTIFWFSFSTMFF 545
F ++G +VV L RF+ EF G S Q + WFS
Sbjct: 543 I--VFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 600
Query: 546 SHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
+ + SL GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 601 QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 658
Score = 176 (67.0 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 592 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 651
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 652 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 772 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEF 828
Score = 79 (32.9 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 23/79 (29%), Positives = 33/79 (41%)
Query: 276 GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAP 335
G + L ++ F GL+G ++F+ N V+ + G R+IGYW N V A
Sbjct: 334 GIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW-NEDDKFVPAA 392
Query: 336 EILYTKPPNSSSNRHLYSV 354
NSS Y V
Sbjct: 393 TDAQAGGDNSSVQNRTYIV 411
Score = 48 (22.0 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P TS Q+ LR + A+ ++++Y W+ + I+ D D G + + + D ++
Sbjct: 114 PVDTSNQFVLQLRPELQE-----ALISIIDHYKWQTFVYIY-DADRGLSVLQRVLDTAAE 167
Query: 99 KRAKIS 104
K +++
Sbjct: 168 KNWQVT 173
>UNIPROTKB|P19490 [details] [associations]
symbol:Gria1 "Glutamate receptor 1" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:621531 GO:GO:0005829
GO:GO:0048167 GO:GO:0042803 GO:GO:0014069 GO:GO:0071363
GO:GO:0005789 GO:GO:0046685 GO:GO:0042493 GO:GO:0032355
GO:GO:0060992 GO:GO:0010226 GO:GO:0042220 GO:GO:0043198
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0051602
GO:GO:0031594 GO:GO:0007616 GO:GO:0032279 GO:GO:0035249
GO:GO:0030288 GO:GO:0032281 GO:GO:0031623 GO:GO:0001919
GO:GO:0019228 GO:GO:0008179 GO:GO:0051018 GO:GO:0021510
GO:GO:0005769 GO:GO:0045838 InterPro:IPR001828 GO:GO:0071375
GO:GO:0060076 GO:GO:0071418 GO:GO:0071230 GO:GO:0050806 PDB:2AWW
PDBsum:2AWW GO:GO:0031681 GO:GO:0004971 GO:GO:0005234 CTD:2890
HOVERGEN:HBG051839 KO:K05197 EMBL:X17184 EMBL:M36418 EMBL:M38060
IPI:IPI00231012 IPI:IPI00324555 PIR:A40170 PIR:S07059
RefSeq:NP_113796.1 UniGene:Rn.29971 PDB:3SAJ PDBsum:3SAJ
ProteinModelPortal:P19490 SMR:P19490 DIP:DIP-30929N IntAct:P19490
MINT:MINT-726538 TCDB:1.A.10.1.1 PhosphoSite:P19490 PRIDE:P19490
GeneID:50592 KEGG:rno:50592 UCSC:RGD:621531 BindingDB:P19490
ChEMBL:CHEMBL3753 EvolutionaryTrace:P19490 NextBio:610434
Genevestigator:P19490 GO:GO:0071359 Uniprot:P19490
Length = 907
Score = 189 (71.6 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 65/238 (27%), Positives = 107/238 (44%)
Query: 387 NEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNP---IYNDIVQQVA 442
N+F D+ +GYC+++ + Y + G G R+P +N +V ++
Sbjct: 427 NQFEGNDR----YEGYCVELAAEIAKHVGYSYRLEIVSDGKYGARDPDTKAWNGMVGELV 482
Query: 443 LNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLV 501
+ D AV +TI R +++DF++P+M G+ +++ QK K ++FL P +W+
Sbjct: 483 YGRADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMC 542
Query: 502 TGGFFLFVG-AVVWILEHRFN------NEFR-G---PPSQQ-----LVTIFWFSFSTMFF 545
F ++G +VV L RF+ EF G S Q + WFS
Sbjct: 543 I--VFAYIGVSVVLFLVSRFSPYEWHSEEFEEGRDQTTSDQSNEFGIFNSLWFSLGAFMQ 600
Query: 546 SHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE 602
+ + SL GR SSYTA+L + LTV+++ S IE + L TE
Sbjct: 601 QGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTE 658
Score = 176 (67.0 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 67/237 (28%), Positives = 100/237 (42%)
Query: 537 WFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGID 595
WFS + + SL GR SSYTA+L + LTV+++ S IE +
Sbjct: 592 WFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAE 651
Query: 596 SLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIA------LARGPKGG 647
L TE G ++ GS + ++ + E +K+ E + R K
Sbjct: 652 DLAKQTEIAYGTLEAGSTKEFFRRSKIAVFEKMWTYMKSAEPSVFVRTTEEGMIRVRKSK 711
Query: 648 GVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENG 707
G A + E E + C+ VG G+G A + S L ++ A+L+L+E G
Sbjct: 712 GKYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSALRNPVNLAVLKLNEQG 771
Query: 708 DLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIACFLALIFF 759
L K+ NKW EC + S LSL + G+F I G+A +ALI F
Sbjct: 772 LLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIGGLGLAMLVALIEF 828
Score = 79 (32.9 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 23/79 (29%), Positives = 33/79 (41%)
Query: 276 GQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSVVAP 335
G + L ++ F GL+G ++F+ N V+ + G R+IGYW N V A
Sbjct: 334 GIDIQRALQQVRFEGLTGNVQFNEKGRRTNYTLHVIEMKHDGIRKIGYW-NEDDKFVPAA 392
Query: 336 EILYTKPPNSSSNRHLYSV 354
NSS Y V
Sbjct: 393 TDAQAGGDNSSVQNRTYIV 411
Score = 48 (22.0 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
Identities = 15/66 (22%), Positives = 33/66 (50%)
Query: 39 PTLTSLQYPYFLRTTQSDYYQMHAVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSK 98
P TS Q+ LR + A+ ++++Y W+ + I+ D D G + + + D ++
Sbjct: 114 PVDTSNQFVLQLRPELQE-----ALISIIDHYKWQTFVYIY-DADRGLSVLQRVLDTAAE 167
Query: 99 KRAKIS 104
K +++
Sbjct: 168 KNWQVT 173
>WB|WBGene00001618 [details] [associations]
symbol:glr-7 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0040039
"inductive cell migration" evidence=IMP] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
GO:GO:0019915 GO:GO:0040039 KO:K05313 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 EMBL:FO080845 RefSeq:NP_508441.3
ProteinModelPortal:Q18591 SMR:Q18591 PaxDb:Q18591
EnsemblMetazoa:C43H6.9 GeneID:180547 KEGG:cel:CELE_C43H6.9
UCSC:C43H6.9 CTD:180547 WormBase:C43H6.9 eggNOG:NOG315397
HOGENOM:HOG000016613 InParanoid:Q18591 OMA:YENTAFQ NextBio:909824
ArrayExpress:Q18591 Uniprot:Q18591
Length = 671
Score = 159 (61.0 bits), Expect = 4.6e-14, Sum P(3) = 4.6e-14
Identities = 58/230 (25%), Positives = 98/230 (42%)
Query: 389 FVAKDKSPPG-VKGYCIDVFEAAVNLLPYPVPHNYIMY-------GNGKRNPIYNDIVQQ 440
FV + P +GYCID+ +N++ V Y +Y G N +N ++
Sbjct: 170 FVQRTGDPDTPYEGYCIDL----INMIQVEVNFTYTIYEVEDGSFGTMDDNGNWNGLIGA 225
Query: 441 VALNKFDAAVGDITIVTNRTKLVDFTQPYMES-GLVVVAPVQKLKSSPWAFLKPFTIPMW 499
+ D A+ ++++ R VDFT PY + G ++ ++ S + F+K P+W
Sbjct: 226 LVSGSADIALAPLSVMAERENDVDFTVPYYDLVGTTILMKKADVEYSLFKFMKVLEWPVW 285
Query: 500 LVTGGFFLFVGAVVWILEHRF------NNEFRGP---PSQQ--LVTIFWFSFSTMFFSHR 548
L +LF ++WI + RF NN+ R +Q L WF +++
Sbjct: 286 LCIVAAYLFTSILLWIFD-RFSPYSFTNNKERYQNDIEKRQFSLKECLWFCMTSLTPQGG 344
Query: 549 ENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSL 597
++ GR +SYTA+L + LTV +L I +D L
Sbjct: 345 GEAPKNISGRLVAATWWLFGFIIIASYTANLAAFLTVSRLEQPISSLDDL 394
Score = 115 (45.5 bits), Expect = 4.6e-14, Sum P(3) = 4.6e-14
Identities = 34/116 (29%), Positives = 54/116 (46%)
Query: 648 GVAAIVD--ELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSE 705
G A I D E+ Y L TNC + VG EF++ + A Q L +S+AIL L
Sbjct: 485 GFAFIGDATEIKYAAL----TNCNLQQVGTEFSRKPYAIAVQSGHILKDKISSAILMLLN 540
Query: 706 NGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLI--CGIACFLALIFF 759
L+ + KW T N + + +S+++ G+F++ GIA + + F
Sbjct: 541 ERRLETLKEKWWTDNPNKVSCPDSSDESDGISIQNIGGVFIVILAGIALSIVTLAF 596
Score = 38 (18.4 bits), Expect = 4.6e-14, Sum P(3) = 4.6e-14
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 318 SRRIGYWSNYSGLSVV 333
++ +G WS S LSV+
Sbjct: 131 NKEVGVWSPISKLSVM 146
>UNIPROTKB|E1BXA6 [details] [associations]
symbol:GRID1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 OMA:LLPWICQ
EMBL:AADN02043560 EMBL:AADN02043561 EMBL:AADN02043562
EMBL:AADN02043563 IPI:IPI00574242 ProteinModelPortal:E1BXA6
Ensembl:ENSGALT00000002914 Uniprot:E1BXA6
Length = 800
Score = 176 (67.0 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 58/216 (26%), Positives = 97/216 (44%)
Query: 396 PPGVKGYCIDVFEA-AVNL-LPYPV---PHNYIMYGNGKRNPIYNDIVQQVALNKFDAAV 450
P KG+ IDV +A A NL Y + P YG+ +N +N ++ ++ + D A+
Sbjct: 250 PKRYKGFSIDVLDALAKNLGFKYEIYQAPDG--KYGHQLQNGSWNGMIGELINKRADLAI 307
Query: 451 GDITIVTNRTKLVDFTQPYMES--GLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLF 508
ITI R +VDF++ YM+ G+++ P +K+ ++ PF +W
Sbjct: 308 SAITITPERESVVDFSKRYMDYSVGILIKKPEEKINI--FSLFAPFDFAVWACIAAAIPI 365
Query: 509 VGAVVWILEH----RFNNEFRGPPSQQ--LVTIFWFSFSTMFFSHRENTVSSLG-RXXXX 561
VG ++++L R N + PS L + W + E+TV+S+ R
Sbjct: 366 VGVLIFVLNRIQAVRAQNASQPSPSASSTLHSAIWVVYGAFVQQGGESTVNSVAMRIVMG 425
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSL 597
SSYTA+L + LTV ++ + I L
Sbjct: 426 SWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDL 461
Score = 157 (60.3 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 63/246 (25%), Positives = 94/246 (38%)
Query: 529 SQQLVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQL 587
S L + W + E+TV+S+ R SSYTA+L + LTV ++
Sbjct: 392 SSTLHSAIWVVYGAFVQQGGESTVNSVAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRM 451
Query: 588 TSQIEGIDSLISSTE-PIGVQDGSFAWNY--------LVDELKIAES-RLVKLKNMEEYS 637
+ I L + G S + Y L + AE R + N +
Sbjct: 452 DNPIRTFQDLSKQMDISYGTVRDSAVYEYFKAKGTNPLEQDNTFAELWRTISKNNGADNC 511
Query: 638 IALA----RGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLA 693
++ R K G A + D ++ C +G + G+G A Q SP
Sbjct: 512 VSNPSEGIRKAKKGNYAFLWDVTVVEYAALTDDECSVTVIGNSISSKGYGIALQHGSPYR 571
Query: 694 IDLSTAILQLSENGDLQKIHNKWLT-YNECSMDL-SPADGGGSRLSLKSFWGLFLICGIA 751
S IL+L E+GDL + KW C ++ + A G L L SF G+F I I
Sbjct: 572 DLFSQRILELQESGDLDVLKQKWWPRMGRCDLNSHTNAQTDGKALKLHSFAGVFCILAIG 631
Query: 752 CFLALI 757
LA +
Sbjct: 632 LLLACL 637
Score = 93 (37.8 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 32/113 (28%), Positives = 51/113 (45%)
Query: 226 LYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLR 285
LY YDSV ++A+A L D K H S + ++GG+ L+T+ +
Sbjct: 111 LYLYDSVLMLANAFHRKLE---------DRKWHSMASLNCMRKSTKPWNGGRSMLETIKK 161
Query: 286 MNFTGLSGEIRFDADKNLVNP--AYDVLNIG-----GTGSRRIGYWSNYSGLS 331
+ TGL+G + F D NP +++L G RR+ W + GL+
Sbjct: 162 GHITGLTGVMEFREDG--ANPYVQFEILGTSYSETFGKDVRRLATWDSEKGLN 212
>UNIPROTKB|F1P7K5 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00590000083056 EMBL:AAEX03008563 EMBL:AAEX03008564
Ensembl:ENSCAFT00000005767 Uniprot:F1P7K5
Length = 859
Score = 171 (65.3 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 61/231 (26%), Positives = 106/231 (45%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYG-NGKRNPIYNDIVQQVALNKFDAAVGDITI 455
+GYCID+ +L + + YG N +N +V+++ +K D AV + I
Sbjct: 411 EGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAI 470
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ ++FL P + +W+ +L V V++
Sbjct: 471 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 530
Query: 515 ILEHRFNN-EFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXX 561
++ RF+ E+ P P +V T+ FWF + E +L R
Sbjct: 531 VIA-RFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 589
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 590 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGA 640
Score = 162 (62.1 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
Identities = 62/244 (25%), Positives = 102/244 (41%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 559 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 618
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKG-- 646
I+ D L T+ G V+DG+ + ++ + + + + S+ + +G
Sbjct: 619 IDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQ-SVLVKSNEEGIQ 677
Query: 647 ---GGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQL 703
A + E IE F+++ NC +G G+G SP ++ AILQL
Sbjct: 678 RVLTSDYAFLMESTTIE-FVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQL 736
Query: 704 SENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRV 763
E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 737 QEEGKLHMMKEKWWRGNGCPEEESKE---ASALGVQNIGGIFIV--LAAGLVLSVFVA-- 789
Query: 764 CGQF 767
G+F
Sbjct: 790 VGEF 793
Score = 99 (39.9 bits), Expect = 4.9e-14, Sum P(2) = 4.9e-14
Identities = 79/337 (23%), Positives = 134/337 (39%)
Query: 6 VAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VAAI GP S A+ + + N L VP + S F + D+ + A+
Sbjct: 54 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQV--SDNKDSFYVSLYPDFSSLSRAI 111
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV+++ W+ V ++ DD G + L A S+ ++ + P ++ A L
Sbjct: 112 LDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKE 168
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
E V + + + I A ++GM Y +I T LD EP +N
Sbjct: 169 MKRGKEFHV-IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALD-VEPYRYSGVN 226
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L +T +T + + I +W + L+ SG + A YD+V
Sbjct: 227 MT-GFRIL--NTENTQVS-SIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAV---- 278
Query: 237 HALDALLNEGGKFTFSN-DPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
H + + + + T S+ H SL + + + L R+ F +G +
Sbjct: 279 HVVSVGVQQFPQMTVSSLQCNRHKPWRFGTRFMSL-IKEAHWEGLTG--RITFNKTNG-L 334
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
R D D DV+++ G +IG W SGL++
Sbjct: 335 RTDFD-------LDVISLKEEGLEKIGTWDPASGLNM 364
>UNIPROTKB|F1P7K6 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060080 "regulation of inhibitory
postsynaptic membrane potential" evidence=IEA] [GO:0060079
"regulation of excitatory postsynaptic membrane potential"
evidence=IEA] [GO:0050806 "positive regulation of synaptic
transmission" evidence=IEA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IEA] [GO:0048169 "regulation
of long-term neuronal synaptic plasticity" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0042734 "presynaptic membrane" evidence=IEA] [GO:0035249
"synaptic transmission, glutamatergic" evidence=IEA] [GO:0032983
"kainate selective glutamate receptor complex" evidence=IEA]
[GO:0019228 "regulation of action potential in neuron"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0004970
"ionotropic glutamate receptor activity" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0006886
GO:GO:0051967 GO:GO:0030054 GO:GO:0045211 GO:GO:0043025
GO:GO:0060079 GO:GO:0042734 GO:GO:0060080 GO:GO:0043524
GO:GO:0035249 GO:GO:0005622 GO:GO:0006874 GO:GO:0019228
GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172
GO:GO:0050806 GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:AAEX03008563 EMBL:AAEX03008564
Ensembl:ENSCAFT00000005766 Uniprot:F1P7K6
Length = 891
Score = 171 (65.3 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 61/231 (26%), Positives = 106/231 (45%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYG-NGKRNPIYNDIVQQVALNKFDAAVGDITI 455
+GYCID+ +L + + YG N +N +V+++ +K D AV + I
Sbjct: 443 EGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAI 502
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ ++FL P + +W+ +L V V++
Sbjct: 503 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 562
Query: 515 ILEHRFNN-EFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXX 561
++ RF+ E+ P P +V T+ FWF + E +L R
Sbjct: 563 VIA-RFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 621
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 622 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGA 672
Score = 162 (62.1 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 62/244 (25%), Positives = 102/244 (41%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 591 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 650
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKG-- 646
I+ D L T+ G V+DG+ + ++ + + + + S+ + +G
Sbjct: 651 IDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQ-SVLVKSNEEGIQ 709
Query: 647 ---GGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQL 703
A + E IE F+++ NC +G G+G SP ++ AILQL
Sbjct: 710 RVLTSDYAFLMESTTIE-FVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQL 768
Query: 704 SENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRV 763
E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 769 QEEGKLHMMKEKWWRGNGCPEEESKE---ASALGVQNIGGIFIV--LAAGLVLSVFVA-- 821
Query: 764 CGQF 767
G+F
Sbjct: 822 VGEF 825
Score = 99 (39.9 bits), Expect = 5.4e-14, Sum P(2) = 5.4e-14
Identities = 79/337 (23%), Positives = 134/337 (39%)
Query: 6 VAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VAAI GP S A+ + + N L VP + S F + D+ + A+
Sbjct: 86 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQV--SDNKDSFYVSLYPDFSSLSRAI 143
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV+++ W+ V ++ DD G + L A S+ ++ + P ++ A L
Sbjct: 144 LDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKE 200
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
E V + + + I A ++GM Y +I T LD EP +N
Sbjct: 201 MKRGKEFHV-IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALD-VEPYRYSGVN 258
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L +T +T + + I +W + L+ SG + A YD+V
Sbjct: 259 MT-GFRIL--NTENTQVS-SIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAV---- 310
Query: 237 HALDALLNEGGKFTFSN-DPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
H + + + + T S+ H SL + + + L R+ F +G +
Sbjct: 311 HVVSVGVQQFPQMTVSSLQCNRHKPWRFGTRFMSL-IKEAHWEGLTG--RITFNKTNG-L 366
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
R D D DV+++ G +IG W SGL++
Sbjct: 367 RTDFD-------LDVISLKEEGLEKIGTWDPASGLNM 396
>UNIPROTKB|F1MG21 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060080 "regulation of inhibitory postsynaptic membrane
potential" evidence=IEA] [GO:0060079 "regulation of excitatory
postsynaptic membrane potential" evidence=IEA] [GO:0050806
"positive regulation of synaptic transmission" evidence=IEA]
[GO:0048172 "regulation of short-term neuronal synaptic plasticity"
evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=IEA] [GO:0032983 "kainate selective glutamate receptor
complex" evidence=IEA] [GO:0019228 "regulation of action potential
in neuron" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004970 "ionotropic glutamate receptor activity"
evidence=IEA] [GO:0001662 "behavioral fear response" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0006886 GO:GO:0051967 GO:GO:0030054 GO:GO:0045211
GO:GO:0043025 GO:GO:0060079 GO:GO:0042734 GO:GO:0060080
GO:GO:0043524 GO:GO:0035249 GO:GO:0005622 GO:GO:0006874
GO:GO:0019228 GO:GO:0001662 GO:GO:0048169 InterPro:IPR001828
GO:GO:0048172 GO:GO:0050806 GO:GO:0005234 GO:GO:0015277
GO:GO:0032983 CTD:2898 KO:K05202 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:DAAA02026130 EMBL:DAAA02026131
EMBL:DAAA02026132 EMBL:DAAA02026133 EMBL:DAAA02026134
EMBL:DAAA02026135 EMBL:DAAA02026136 EMBL:DAAA02026137
EMBL:DAAA02026138 EMBL:DAAA02026139 EMBL:DAAA02026140
EMBL:DAAA02026141 EMBL:DAAA02026142 IPI:IPI00706450
RefSeq:NP_001179992.1 UniGene:Bt.32868 ProteinModelPortal:F1MG21
Ensembl:ENSBTAT00000015563 GeneID:615226 KEGG:bta:615226
NextBio:20899512 Uniprot:F1MG21
Length = 908
Score = 171 (65.3 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 61/231 (26%), Positives = 106/231 (45%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYG-NGKRNPIYNDIVQQVALNKFDAAVGDITI 455
+GYCID+ +L + + YG N +N +V+++ +K D AV + I
Sbjct: 460 EGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAI 519
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ ++FL P + +W+ +L V V++
Sbjct: 520 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCVLF 579
Query: 515 ILEHRFNN-EFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXX 561
++ RF+ E+ P P +V T+ FWF + E +L R
Sbjct: 580 VIA-RFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVGG 638
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 639 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGA 689
Score = 162 (62.1 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 62/244 (25%), Positives = 102/244 (41%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 608 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 667
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKG-- 646
I+ D L T+ G V+DG+ + ++ + + + + S+ + +G
Sbjct: 668 IDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQ-SVLVKSNEEGIQ 726
Query: 647 ---GGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQL 703
A + E IE F+++ NC +G G+G SP ++ AILQL
Sbjct: 727 RVLTSDYAFLMESTTIE-FVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQL 785
Query: 704 SENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRV 763
E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 786 QEEGKLHMMKEKWWRGNGCPEEESKE---ASALGVQNIGGIFIV--LAAGLVLSVFVA-- 838
Query: 764 CGQF 767
G+F
Sbjct: 839 VGEF 842
Score = 99 (39.9 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 79/337 (23%), Positives = 134/337 (39%)
Query: 6 VAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VAAI GP S A+ + + N L VP + S F + D+ + A+
Sbjct: 103 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQV--SDNKDSFYVSLYPDFSSLSRAI 160
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV+++ W+ V ++ DD G + L A S+ ++ + P ++ A L
Sbjct: 161 LDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKE 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
E V + + + I A ++GM Y +I T LD EP +N
Sbjct: 218 MKRGKEFHV-IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALD-VEPYRYSGVN 275
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L +T +T + + I +W + L+ SG + A YD+V
Sbjct: 276 MT-GFRIL--NTENTQVS-SIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAV---- 327
Query: 237 HALDALLNEGGKFTFSN-DPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
H + + + + T S+ H SL + + + L R+ F +G +
Sbjct: 328 HVVSVGVQQFPQMTVSSLQCNRHKPWRFGTRFMSL-IKEAHWEGLTG--RITFNKTNG-L 383
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
R D D DV+++ G +IG W SGL++
Sbjct: 384 RTDFD-------LDVISLKEEGLEKIGTWDPASGLNM 413
>UNIPROTKB|Q38PU3 [details] [associations]
symbol:GRIK2 "Glutamate receptor ionotropic, kainate 2"
species:9541 "Macaca fascicularis" [GO:0030424 "axon" evidence=IDA]
[GO:0043197 "dendritic spine" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0030424 GO:GO:0043197 GO:GO:0035235 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 HOVERGEN:HBG051839 EMBL:DQ159934
HSSP:P22756 ProteinModelPortal:Q38PU3 SMR:Q38PU3 Uniprot:Q38PU3
Length = 908
Score = 167 (63.8 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 61/231 (26%), Positives = 105/231 (45%)
Query: 400 KGYCIDVFEAAVNLLPYPVPHNYI---MYG-NGKRNPIYNDIVQQVALNKFDAAVGDITI 455
+GYCID+ +L + + YG N +N +V+++ +K D AV + I
Sbjct: 460 EGYCIDLLRELSTILGFTYEIRLVEDGKYGAQDDANGQWNGMVRELIDHKADLAVAPLAI 519
Query: 456 VTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVGAVVW 514
R K++DF++P+M G+ ++ ++FL P + +W+ L V V++
Sbjct: 520 TYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLF 579
Query: 515 ILEHRFNN-EFRGP----PSQQLV----TI---FWFSFSTMFFSHRENTVSSLG-RXXXX 561
++ RF+ E+ P P +V T+ FWF + E +L R
Sbjct: 580 VIA-RFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMRQGSELMPKALSTRIVGG 638
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIG-VQDGS 610
SSYTA+L + LTV+++ S I+ D L T+ G V+DG+
Sbjct: 639 IWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIEYGAVEDGA 689
Score = 162 (62.1 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 62/244 (25%), Positives = 102/244 (41%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 608 LLNSFWFGVGALMRQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 667
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKG-- 646
I+ D L T+ G V+DG+ + ++ + + + + S+ + +G
Sbjct: 668 IDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQ-SVLVKSNEEGIQ 726
Query: 647 ---GGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQL 703
A + E IE F+++ NC +G G+G SP ++ AILQL
Sbjct: 727 RVLTSDYAFLMESTTIE-FVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQL 785
Query: 704 SENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRV 763
E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 786 QEEGKLHMMKEKWWRGNGCPEEESKE---ASALGVQNIGGIFIV--LAAGLVLSVFVA-- 838
Query: 764 CGQF 767
G+F
Sbjct: 839 VGEF 842
Score = 102 (41.0 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 79/337 (23%), Positives = 134/337 (39%)
Query: 6 VAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VAAI GP S A+ + + N L VP + S F + D+ + A+
Sbjct: 103 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQV--SDNKDSFYVSLYPDFSSLSRAI 160
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV+++ W+ V ++ DD G + L A S+ ++ + P ++ A L
Sbjct: 161 LDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKE 217
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
E V + + + I A ++GM Y +I T LD EP +N
Sbjct: 218 MKRGKEFHV-IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALD-VEPYRYSGVN 275
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L +T +T + + I +W + L+ SG + A YD+V
Sbjct: 276 MT-GFRIL--NTENTQVS-SIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAV---- 327
Query: 237 HALDALLNEGGKFTFSN-DPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
H + + + + T S+ H SL + + + L R+ F +G +
Sbjct: 328 HVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSL-IKEAHWEGLTG--RITFNKTNG-L 383
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
R D D DV+++ G +IG W SGL++
Sbjct: 384 RTDFD-------LDVISLKEEGLEKIGTWDPASGLNM 413
>UNIPROTKB|F1NNR5 [details] [associations]
symbol:GRIA3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0004971
"alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
glutamate receptor activity" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GeneTree:ENSGT00590000082809 GO:GO:0004971 GO:GO:0005234
EMBL:AADN02013607 EMBL:AADN02013608 IPI:IPI00601591
Ensembl:ENSGALT00000039107 ArrayExpress:F1NNR5 Uniprot:F1NNR5
Length = 353
Score = 195 (73.7 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 73/248 (29%), Positives = 106/248 (42%)
Query: 527 PPSQ-QLVTIFWFSFSTMFFSHRENTVSSL-GRXXXXXXXXXXXXXNSSYTASLTSILTV 584
PP++ + WFS + + SL GR SSYTA+L + LTV
Sbjct: 58 PPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTV 117
Query: 585 QQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVKLKNMEEYSIA--- 639
+++ S IE + L TE G D GS + ++ + E +K+ E
Sbjct: 118 ERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPSVFTKTT 177
Query: 640 ---LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDL 696
+AR K G A + E E + C+ VG G+G A + S L +
Sbjct: 178 ADGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGVATPKGSALRTPV 237
Query: 697 STAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLIC----GIA 751
+ A+L+LSE G L K+ NKW EC S + S LSL + G+F I G+A
Sbjct: 238 NLAVLKLSEQGILDKLKNKWWYDKGECGAKDSGSKDKTSALSLSNVAGVFYILVGGLGLA 297
Query: 752 CFLALIFF 759
+ALI F
Sbjct: 298 MMVALIEF 305
Score = 49 (22.3 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 10/31 (32%), Positives = 19/31 (61%)
Query: 803 LIDFIDRKEAEIKEILKRRNSDNKRPSQSSD 833
LI+F + AE K + +N+ N +P+ S++
Sbjct: 302 LIEFCYKSRAESKRMKLTKNTQNFKPAPSTN 332
Score = 44 (20.5 bits), Expect = 8.7e-14, Sum P(3) = 8.7e-14
Identities = 11/35 (31%), Positives = 19/35 (54%)
Query: 488 WAFLKPFTIPMWLVTGGFFLFVG-AVVWILEHRFN 521
++FL P +W+ F ++G +VV L RF+
Sbjct: 4 FSFLDPLAYEIWMCI--VFAYIGVSVVLFLVSRFS 36
>UNIPROTKB|D4A2K9 [details] [associations]
symbol:Grin2c "Glutamate receptor ionotropic, NMDA 2C"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2739
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 IPI:IPI00201739 ProteinModelPortal:D4A2K9
Ensembl:ENSRNOT00000004502 ArrayExpress:D4A2K9 Uniprot:D4A2K9
Length = 1200
Score = 184 (69.8 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 59/243 (24%), Positives = 114/243 (46%)
Query: 370 PNNGMPLRIAVP-NRVSYNEFVAKDKSPPG---VKGYCIDVFEAAVNLLPYPVPHNYIMY 425
P G + VP R S + F + D +P KG+CID+ + ++ + +
Sbjct: 421 PGTGGCVPNTVPCRRQSNHTFSSGDLTPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTN 480
Query: 426 G-NGKR-NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKL 483
G +GKR ++N ++ +V + D A+G +TI R++++DF+ P++E+G+ V+
Sbjct: 481 GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVSRSNG 540
Query: 484 KSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEFR-----GPPSQQLV 533
SP AFL+P++ +W++ L V A+ V++ E+ +N G PS +
Sbjct: 541 TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTKGKKPGGPSFTIG 600
Query: 534 TIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQI 591
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 601 KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV 660
Query: 592 EGI 594
G+
Sbjct: 661 SGL 663
Score = 94 (38.1 bits), Expect = 0.00033, Sum P(3) = 0.00033
Identities = 61/251 (24%), Positives = 105/251 (41%)
Query: 477 VAPVQKLKS-SPWAFLKPFTIPMWLVTGGFFLF-VGAVVWILEHRFNNEFRGPPSQQLVT 534
V+P L+ SP ++ F + + +V F+F + V ++ + G PS +
Sbjct: 542 VSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTKGKKPGGPSFTIGK 601
Query: 535 IFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIE 592
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 602 SVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVS 661
Query: 593 GI-DSLISSTE---P---IG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGP 644
G+ D + P G V +GS N + + + +VK N AL
Sbjct: 662 GLSDKKFQRPQDQYPPFRFGTVPNGSTERN-IRSNYRDMHTHMVKF-NQRSVEDALT-SL 718
Query: 645 KGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKSGWGFAFQRDS--PLAIDLSTA 699
K G + A + + + K C+ T+G + F +G+G A Q+DS AIDL A
Sbjct: 719 KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDL--A 776
Query: 700 ILQLSENGDLQ 710
+LQL +G LQ
Sbjct: 777 LLQLLGDGHLQ 787
Score = 86 (35.3 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 33/158 (20%), Positives = 66/158 (41%)
Query: 13 SSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYP--YFLRTTQSDYYQMHAVADLVEYY 70
+ +A ++ V ++ +VP+LS + + + P FL+ S Q+ + ++E Y
Sbjct: 101 TEAVAQLLDFVSSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 71 GWREVIAIFVDDDYGR----NGISVLGDA--LSKKRAKISYKAPFSPGASRSAINSLLVG 124
W A+ G G+ + DA LS + + PG R+ LL
Sbjct: 161 DW-SAFAVITSLHPGHALFLEGVRAVADASYLSWRLLDV-LTLELGPGGPRARTQRLL-- 216
Query: 125 ANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
+++ V V + + + +F+ A G+ +VW+
Sbjct: 217 -RQVDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWL 253
Score = 46 (21.3 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 342 PPNSSSNRHLYSVIWPG-EITATPRGWV 368
P + RHL +V W G + + +P G++
Sbjct: 326 PAREAFYRHLLNVTWEGRDFSFSPGGYL 353
Score = 39 (18.8 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 106 KAPFSPGASRS---AINSLLVGANLMESRVFVVHVNPDTG 142
K P P S S ++S + +E R FV+ +PD G
Sbjct: 383 KYPVWPRYSTSLQPVVDSRHLTVATLEERPFVIVESPDPG 422
>WB|WBGene00001616 [details] [associations]
symbol:glr-5 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0005216 "ion channel
activity" evidence=IEA] [GO:0006811 "ion transport" evidence=IEA]
[GO:0005215 "transporter activity" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 eggNOG:NOG316680 KO:K05313 GO:GO:0005234
GO:GO:0004970 GeneTree:ENSGT00700000104113 HSSP:P19491
EMBL:FO080218 PIR:T25941 RefSeq:NP_505244.1
ProteinModelPortal:O01623 SMR:O01623 STRING:O01623
EnsemblMetazoa:ZC196.7 GeneID:179251 KEGG:cel:CELE_ZC196.7
UCSC:ZC196.7 CTD:179251 WormBase:ZC196.7 HOGENOM:HOG000016348
InParanoid:O01623 OMA:IFRERED NextBio:904564 ArrayExpress:O01623
Uniprot:O01623
Length = 932
Score = 123 (48.4 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 50/195 (25%), Positives = 84/195 (43%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAESRLVKL 630
S+YTA+L ++LTV + I+ +D L + T G G + E +IA VK+
Sbjct: 670 SAYTANLAAVLTVSRPYIPIKNLDDLANQTTISYGTIRGGSTMQFF-QESRIAAH--VKM 726
Query: 631 -KNMEEYSIALARGPKGGGVA-----AIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGF 684
+ M++ + + KG A A + E +E + ++ NC +G G+G
Sbjct: 727 WQYMKDKDVFVTSNGKGVERALSMNYAYLMESTSLE-YETQQNCNLTQIGGVLGSKGYGI 785
Query: 685 AFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYN--ECSMDLSPADGGGSRLSLKSFW 742
A + S +S IL ++ G ++ KW C+ S LS+ +
Sbjct: 786 ALAKKSEWTDRISRQILLYAKRGIIEMKKTKWWRSKGAACASTASAVKHDRFALSMYNVA 845
Query: 743 GLFLICGIACFLALI 757
GLF+ G+ LA I
Sbjct: 846 GLFITLGVGIVLAAI 860
Score = 101 (40.6 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 28/106 (26%), Positives = 57/106 (53%)
Query: 400 KGYCIDVF-EAAVNL-LPYPVPHNYI--MYGNGKR-NPIYNDIVQQVALNKFDAAVGDIT 454
+G+CID+ E + +L Y + H YGN K N ++ ++ ++ + + AV +T
Sbjct: 466 EGFCIDLLAELSKDLGFTYTI-HAVKDGKYGNDKYGNGSWDGMMGEILRGEAEMAVAPLT 524
Query: 455 IVTNRTKLVDFTQPYMESGLVVVAPV-QKLKSSPWAFLKPFTIPMW 499
+ R++ VDFT+P++ G+ ++ V + ++FL P + +W
Sbjct: 525 VNYRRSEAVDFTKPFLSLGISILYKVPDDQQPDLFSFLNPLSWQIW 570
Score = 91 (37.1 bits), Expect = 1.3e-13, Sum P(3) = 1.3e-13
Identities = 67/354 (18%), Positives = 147/354 (41%)
Query: 2 ENEVVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQMH 61
++ +VA +G + + + + ++L++P L+ A D T + + ++
Sbjct: 84 KDHIVALLGGSHAALNAQLERITDDLDIPFLT--AIDDLRTDMGKSKIDFWPRPQLFE-- 139
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKIS-YKAPFSPG----ASRS 116
AV D+ ++ W ++ ++ D+ R +L S++ A I Y G A+R
Sbjct: 140 AVVDMFTHWRWNRIVLVYEGDERIRRLEQLLE---SEEYASIRFYLIKVHDGDYMKAARQ 196
Query: 117 AIN----SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLD 172
LL + E +V +NP+ T + +G+ + ++ T+ S +D
Sbjct: 197 VKELEECRLLHKKDCSEFSRLLVDMNPEHTYTFLLASLQMGLIELKHWFLLTNMELSTMD 256
Query: 173 ST----------EPVDIDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKENSPSGFN 222
P +D+ L + A + K++ +W +K +NS +
Sbjct: 257 MELFRYNHARFISPYPVDSTFLTENRDAFNF----SHFKEHITEKWA-MK-TDNSRNLKM 310
Query: 223 SYALYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSL--RVFDGGQQFL 280
A++ +D+V+ A+ + NE S+ +++D ++ SS R + G+ +
Sbjct: 311 MEAVFTFDAVYAFAN----VFNE-----LSSHMQMNDVPQTLCRKSSRNSRKYQHGRSLI 361
Query: 281 QTLLRMNFTGLSGEIR-FDADKNLVNPAYDVLNIGGTGSRR-IGYWSNYSGLSV 332
++ + GLSG++R + N + + +G +G IG+W + + V
Sbjct: 362 DNIVHNDLHGLSGDLRRLNGHPLKSNFSMRIQLLGYSGRLDDIGFWEPATNVHV 415
>UNIPROTKB|G3V186 [details] [associations]
symbol:GRID1 "Glutamate receptor, ionotropic, delta 1,
isoform CRA_a" species:9606 "Homo sapiens" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
PRINTS:PR00177 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0035235 EMBL:CH471142 InterPro:IPR001828 GO:GO:0005234
GO:GO:0004970 UniGene:Hs.530653 HGNC:HGNC:4575 EMBL:AL844892
EMBL:AC022028 EMBL:AC073162 EMBL:AC079955 EMBL:AL451059
EMBL:AL596135 EMBL:AL683834 EMBL:AL732479 SMR:G3V186
Ensembl:ENST00000464741 Uniprot:G3V186
Length = 755
Score = 175 (66.7 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 59/235 (25%), Positives = 99/235 (42%)
Query: 396 PPGVKGYCIDVFEAAVNLLP-----YPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAV 450
P KG+ IDV +A L Y P YG+ N +N ++ ++ + D A+
Sbjct: 460 PKRYKGFSIDVLDALAKALGFKYEIYQAPDG--RYGHQLHNTSWNGMIGELISKRADLAI 517
Query: 451 GDITIVTNRTKLVDFTQPYMES--GLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLF 508
ITI R +VDF++ YM+ G+++ P +K+ S ++ PF +W
Sbjct: 518 SAITITPERESVVDFSKRYMDYSVGILIKKPEEKI--SIFSLFAPFDFAVWACIAAAIPV 575
Query: 509 VGAVVWILEH----RFNNEFRGPPSQQ--LVTIFWFSFSTMFFSHRENTVSSLG-RXXXX 561
VG ++++L R + + PS L + W + E++V+S+ R
Sbjct: 576 VGVLIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSVNSMAMRIVMG 635
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNY 615
SSYTA+L + LTV ++ + I L E G S + Y
Sbjct: 636 SWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEY 690
Score = 89 (36.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 226 LYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLR 285
LY YDSV ++A+A L D K H S + ++GG+ L T+ +
Sbjct: 321 LYLYDSVLMLANAFHRKLE---------DRKWHSMASLNCIRKSTKPWNGGRSMLDTIKK 371
Query: 286 MNFTGLSGEIRFDADKNLVNPAYDVLNIG-----GTGSRRIGYWSNYSGLS 331
+ TGL+G + F D + +++L G R++ W + GL+
Sbjct: 372 GHITGLTGVMEFREDSSNPYVQFEILGTTYSETFGKDMRKLATWDSEKGLN 422
>RGD|2739 [details] [associations]
symbol:Grin2c "glutamate receptor, ionotropic, N-methyl D-aspartate
2C" species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IDA] [GO:0004972
"N-methyl-D-aspartate selective glutamate receptor activity"
evidence=ISO;IDA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel activity"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006812 "cation
transport" evidence=ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0009611 "response to wounding"
evidence=IEA;ISO] [GO:0014069 "postsynaptic density"
evidence=IEA;ISO] [GO:0017146 "N-methyl-D-aspartate selective
glutamate receptor complex" evidence=ISO;IDA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0030165 "PDZ domain binding"
evidence=IPI] [GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0033058 "directional locomotion" evidence=IEA;ISO]
[GO:0034220 "ion transmembrane transport" evidence=ISO] [GO:0035235
"ionotropic glutamate receptor signaling pathway" evidence=ISO;IDA]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IEA;ISO] [GO:0042391 "regulation of membrane potential"
evidence=ISO] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA;ISO]
[GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA;ISO] [GO:0001964 "startle response"
evidence=ISO] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094 RGD:2739
GO:GO:0005737 GO:GO:0014069 GO:GO:0008104 GO:GO:0009611 GO:GO:0030054
GO:GO:0045211 GO:GO:0050885 GO:GO:0060079 GO:GO:0030288 GO:GO:0005261
GO:GO:0042177 InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0004972 GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 CTD:2905 HOVERGEN:HBG052636
KO:K05211 OrthoDB:EOG42RD6M EMBL:M91563 EMBL:D13212 IPI:IPI00326555
RefSeq:NP_036707.3 UniGene:Rn.9709 ProteinModelPortal:Q00961
SMR:Q00961 IntAct:Q00961 MINT:MINT-87425 STRING:Q00961
PhosphoSite:Q00961 PRIDE:Q00961 Ensembl:ENSRNOT00000004477
GeneID:24411 KEGG:rno:24411 InParanoid:Q00961 BindingDB:Q00961
ChEMBL:CHEMBL401 NextBio:603235 ArrayExpress:Q00961
Genevestigator:Q00961 GermOnline:ENSRNOG00000003280 Uniprot:Q00961
Length = 1237
Score = 184 (69.8 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 59/243 (24%), Positives = 114/243 (46%)
Query: 370 PNNGMPLRIAVP-NRVSYNEFVAKDKSPPG---VKGYCIDVFEAAVNLLPYPVPHNYIMY 425
P G + VP R S + F + D +P KG+CID+ + ++ + +
Sbjct: 421 PGTGGCVPNTVPCRRQSNHTFSSGDLTPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTN 480
Query: 426 G-NGKR-NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKL 483
G +GKR ++N ++ +V + D A+G +TI R++++DF+ P++E+G+ V+
Sbjct: 481 GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVSRSNG 540
Query: 484 KSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEFR-----GPPSQQLV 533
SP AFL+P++ +W++ L V A+ V++ E+ +N G PS +
Sbjct: 541 TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTKGKKPGGPSFTIG 600
Query: 534 TIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQI 591
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 601 KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV 660
Query: 592 EGI 594
G+
Sbjct: 661 SGL 663
Score = 133 (51.9 bits), Expect = 3.4e-08, Sum P(3) = 3.4e-08
Identities = 73/300 (24%), Positives = 129/300 (43%)
Query: 477 VAPVQKLKS-SPWAFLKPFTIPMWLVTGGFFLF-VGAVVWILEHRFNNEFRGPPSQQLVT 534
V+P L+ SP ++ F + + +V F+F + V ++ + G PS +
Sbjct: 542 VSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTKGKKPGGPSFTIGK 601
Query: 535 IFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIE 592
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 602 SVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVS 661
Query: 593 GI-DSLISSTE---P---IG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGP 644
G+ D + P G V +GS N + + + +VK N AL
Sbjct: 662 GLSDKKFQRPQDQYPPFRFGTVPNGSTERN-IRSNYRDMHTHMVKF-NQRSVEDALT-SL 718
Query: 645 KGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKSGWGFAFQRDS--PLAIDLSTA 699
K G + A + + + K C+ T+G + F +G+G A Q+DS AIDL A
Sbjct: 719 KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDL--A 776
Query: 700 ILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFF 759
+LQL +G+ QK+ WL+ C + + S+L + + G+F + +A LAL+ F
Sbjct: 777 LLQLLGDGETQKLETVWLS-GICQNEKNEVMS--SKLDIDNMAGVFYMLLVAMGLALLVF 833
Score = 86 (35.3 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 33/158 (20%), Positives = 66/158 (41%)
Query: 13 SSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYP--YFLRTTQSDYYQMHAVADLVEYY 70
+ +A ++ V ++ +VP+LS + + + P FL+ S Q+ + ++E Y
Sbjct: 101 TEAVAQLLDFVSSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 71 GWREVIAIFVDDDYGR----NGISVLGDA--LSKKRAKISYKAPFSPGASRSAINSLLVG 124
W A+ G G+ + DA LS + + PG R+ LL
Sbjct: 161 DW-SAFAVITSLHPGHALFLEGVRAVADASYLSWRLLDV-LTLELGPGGPRARTQRLL-- 216
Query: 125 ANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
+++ V V + + + +F+ A G+ +VW+
Sbjct: 217 -RQVDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWL 253
Score = 46 (21.3 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 342 PPNSSSNRHLYSVIWPG-EITATPRGWV 368
P + RHL +V W G + + +P G++
Sbjct: 326 PAREAFYRHLLNVTWEGRDFSFSPGGYL 353
Score = 39 (18.8 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 106 KAPFSPGASRS---AINSLLVGANLMESRVFVVHVNPDTG 142
K P P S S ++S + +E R FV+ +PD G
Sbjct: 383 KYPVWPRYSTSLQPVVDSRHLTVATLEERPFVIVESPDPG 422
>WB|WBGene00001615 [details] [associations]
symbol:glr-4 species:6239 "Caenorhabditis elegans"
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005215
"transporter activity" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030288 "outer membrane-bounded periplasmic
space" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060
Pfam:PF10613 SMART:SM00079 SMART:SM00918 Pfam:PF01094 GO:GO:0016021
GO:GO:0005886 GO:GO:0030054 GO:GO:0045211 GO:GO:0035235
InterPro:IPR001828 KO:K05313 GO:GO:0005234 GO:GO:0004970
GeneTree:ENSGT00700000104113 HOGENOM:HOG000234371 HSSP:P19491
EMBL:FO080131 GeneID:174258 KEGG:cel:CELE_C06A8.9 CTD:174258
PIR:T15429 RefSeq:NP_001254126.1 ProteinModelPortal:Q17697
SMR:Q17697 EnsemblMetazoa:C06A8.9a UCSC:C06A8.9 WormBase:C06A8.9a
InParanoid:Q17697 OMA:IESRHEA NextBio:883261 ArrayExpress:Q17697
Uniprot:Q17697
Length = 951
Score = 149 (57.5 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 54/206 (26%), Positives = 94/206 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGV-QDGSFAWNYLVDELKIAESRLVK 629
SSYTA L + LTV+++++ IE L + + GV + GS + ++ + E R+
Sbjct: 624 SSYTAQLAAFLTVERMSTPIESTQDLANQQKIRYGVLKSGSTMDFFRESKIPMYE-RMWS 682
Query: 630 LKNMEEYSI-------ALARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGW 682
+ + +AR K GG A ++ E +E ++ + +CE +++G G+
Sbjct: 683 VMESSSPGVFVNSSREGIAR-VKSGGYAYMM-ESSMLEYYLER-DCELQSIGGLLDSKGY 739
Query: 683 GFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSL-KSF 741
G A + SPL LS +LQL E L+ + NKW P + S ++
Sbjct: 740 GIALPKGSPLRDILSRTVLQLQERTILEALKNKWWRDRREGPSCGPPPSEKATNSKPQNI 799
Query: 742 WGLFLICGIACFLALIFFFCRVCGQF 767
+G+F + LI F CG++
Sbjct: 800 FGIFYVL----LTGLIVAFLLACGEY 821
Score = 125 (49.1 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 35/134 (26%), Positives = 66/134 (49%)
Query: 373 GMPLRIAVPNRVSYNEFVAKDKSPPGVKGYCIDVFEAAVNLLPYPVPHNYIM---YGNGK 429
G+ LR+ V FV K +G+CID+ +L + + YG
Sbjct: 407 GLHLRVVV---YLEEPFVIKTGENQ-YEGFCIDLLNEMTQVLKFNYTIIEVQDGTYGIED 462
Query: 430 RNPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKL--KSS 486
+ +N I+ + ++ D ++ +TI +R ++VDFT P+M G+ +++A + K S
Sbjct: 463 ESGRWNGIIGALQRHEADLSLSAVTITYSRAEVVDFTLPFMHLGISILLARTSEETDKGS 522
Query: 487 PWAFLKPFTIPMWL 500
W FL+P ++ +W+
Sbjct: 523 LWTFLEPLSLTVWI 536
Score = 39 (18.8 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 13/47 (27%), Positives = 20/47 (42%)
Query: 275 GGQQFLQTLLRMNFTGLSGEIRFDADKNLVNPAYDVLNIGGTGSRRI 321
G + + L M +TG + +D ++P I TG RRI
Sbjct: 142 GARATSEFLDSMRWTGFLLAYQHGSDLEDLSPLMQYKQIVDTGGRRI 188
>UNIPROTKB|P19439 [details] [associations]
symbol:KBP "Probable glutamate receptor" species:9031
"Gallus gallus" [GO:0004970 "ionotropic glutamate receptor
activity" evidence=IEA] [GO:0005234 "extracellular-glutamate-gated
ion channel activity" evidence=IEA] [GO:0030288 "outer
membrane-bounded periplasmic space" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR001638
InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177
SMART:SM00079 SMART:SM00918 GO:GO:0016021 GO:GO:0005886
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GO:GO:0005234 GO:GO:0004970 EMBL:X17700 IPI:IPI00597968 PIR:S07062
RefSeq:NP_990684.1 UniGene:Gga.42516 ProteinModelPortal:P19439
Ensembl:ENSGALT00000001776 GeneID:396300 KEGG:gga:396300
CTD:100002194 eggNOG:NOG241927 GeneTree:ENSGT00700000104113
HOGENOM:HOG000234371 HOVERGEN:HBG104989 InParanoid:P19439
OMA:YLRSKWW OrthoDB:EOG43FGX0 NextBio:20816350 Uniprot:P19439
Length = 487
Score = 209 (78.6 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 90/380 (23%), Positives = 164/380 (43%)
Query: 399 VKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPIYN--DIVQQVALNKFDAAVGDITI 455
++GYCID+ +A ++L + + G G +P N ++ ++ + D AV +T+
Sbjct: 67 LEGYCIDLLKALASMLHFSYKVKVVGDGKYGAISPSGNWTGMIGEILRQEADIAVAPLTV 126
Query: 456 VTNRTKLVDFTQPYMESGLVVVAPVQKLKS--SPWAFLKPFTIPMWLVTGGFFLFVGAVV 513
+ R ++V FT P++++G+ ++ + + S + FL PF+ W TG F +V V
Sbjct: 127 TSAREEVVSFTTPFLQTGIGILLRKETISQEMSFFHFLAPFSKETW--TGLLFAYVLTCV 184
Query: 514 WI-LEHRFNN-EFRGPPSQQ----LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXX 566
+ L R + E+ P +++ + WF + + R
Sbjct: 185 CLFLVARLSPCEWNEPKNEENHFTFLNSLWFGAGALTLQGVTPRPKAFSVRVIAAIWWLF 244
Query: 567 XXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNYLVDELKIAES 625
++Y A+ T++L+ I+ + L+ + G DGS + Y K
Sbjct: 245 TIALLAAYIANFTALLSSGSEQLSIQTFEDLVKQRKLEFGTLDGSSTF-YFFKNSKNPIH 303
Query: 626 RLV-----KLKN---MEEYSIALARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEF 677
R+V K ++ ++ Y A+ R + A + E +L ++ +C +
Sbjct: 304 RMVYEYMDKRRDHVLVKTYQEAVQRVMESN--YAFIGESISQDLAAAR-HCNLIRAPEVI 360
Query: 678 TKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLS 737
G+G A + SP LS A+L+L E GDL + NKW + C L + G S L
Sbjct: 361 GARGFGIATAQASPWTKKLSVAVLKLRETGDLDYLRNKWWE-SSC---LHKSREGWSPLQ 416
Query: 738 LKSFWGLFLICGIACFLALI 757
++ GLFL I L +I
Sbjct: 417 PQALGGLFLTLAIGLALGVI 436
>MGI|MGI:95822 [details] [associations]
symbol:Grin2c "glutamate receptor, ionotropic, NMDA2C (epsilon
3)" species:10090 "Mus musculus" [GO:0001964 "startle response"
evidence=IMP] [GO:0004872 "receptor activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=ISO]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=ISO;IGI;IMP] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0005234 "extracellular-glutamate-gated ion
channel activity" evidence=IEA] [GO:0005261 "cation channel
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006812 "cation transport" evidence=IMP]
[GO:0008104 "protein localization" evidence=IGI;IMP] [GO:0009611
"response to wounding" evidence=IGI] [GO:0014069 "postsynaptic
density" evidence=IDA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=ISO;IPI] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=ISO] [GO:0033058
"directional locomotion" evidence=IGI] [GO:0034220 "ion
transmembrane transport" evidence=IMP] [GO:0035235 "ionotropic
glutamate receptor signaling pathway" evidence=ISO;IGI;IMP]
[GO:0042177 "negative regulation of protein catabolic process"
evidence=IGI] [GO:0042391 "regulation of membrane potential"
evidence=IMP] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0060079 "regulation
of excitatory postsynaptic membrane potential" evidence=IGI;IMP]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 MGI:MGI:95822 GO:GO:0005737
GO:GO:0014069 GO:GO:0008104 GO:GO:0009611 GO:GO:0030054
GO:GO:0045211 GO:GO:0050885 GO:GO:0060079 GO:GO:0005261
GO:GO:0042177 InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234
eggNOG:NOG282132 GO:GO:0004972 GO:GO:0033058 InterPro:IPR018884
Pfam:PF10565 GeneTree:ENSGT00540000070221 CTD:2905
HOVERGEN:HBG052636 KO:K05211 OMA:CTWRRIS OrthoDB:EOG42RD6M
EMBL:D10694 IPI:IPI00321321 PIR:I49705 RefSeq:NP_034480.2
UniGene:Mm.39090 ProteinModelPortal:Q01098 SMR:Q01098 IntAct:Q01098
MINT:MINT-104161 STRING:Q01098 PhosphoSite:Q01098 PaxDb:Q01098
PRIDE:Q01098 Ensembl:ENSMUST00000003351 Ensembl:ENSMUST00000106554
GeneID:14813 KEGG:mmu:14813 HOGENOM:HOG000231061 InParanoid:Q01098
BindingDB:Q01098 ChEMBL:CHEMBL3555 NextBio:287007 Bgee:Q01098
Genevestigator:Q01098 GermOnline:ENSMUSG00000020734 Uniprot:Q01098
Length = 1239
Score = 183 (69.5 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 59/243 (24%), Positives = 114/243 (46%)
Query: 370 PNNGMPLRIAVP-NRVSYNEFVAKDKSPPG---VKGYCIDVFEAAVNLLPYPVPHNYIMY 425
P G + VP R S + F + D +P KG+CID+ + ++ + +
Sbjct: 421 PGTGGCVPNTVPCRRQSNHTFSSGDITPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTN 480
Query: 426 G-NGKR-NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQKL 483
G +GKR ++N ++ +V + D A+G +TI R++++DF+ P++E+G+ V+
Sbjct: 481 GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVARSNG 540
Query: 484 KSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEFR-----GPPSQQLV 533
SP AFL+P++ +W++ L V A+ V++ E+ +N G PS +
Sbjct: 541 TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTKGKKSGGPSFTIG 600
Query: 534 TIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQI 591
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 601 KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV 660
Query: 592 EGI 594
G+
Sbjct: 661 SGL 663
Score = 129 (50.5 bits), Expect = 9.0e-08, Sum P(3) = 9.0e-08
Identities = 72/300 (24%), Positives = 128/300 (42%)
Query: 477 VAPVQKLKS-SPWAFLKPFTIPMWLVTGGFFLF-VGAVVWILEHRFNNEFRGPPSQQLVT 534
V+P L+ SP ++ F + + +V F+F + V ++ + G PS +
Sbjct: 542 VSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTKGKKSGGPSFTIGK 601
Query: 535 IFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIE 592
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 602 SVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVS 661
Query: 593 GI-DSLISSTE---P---IG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGP 644
G+ D + P G V +GS N + + + +VK N AL
Sbjct: 662 GLSDKKFQRPQDQYPPFRFGTVPNGSTERN-IRSNYRDMHTHMVKF-NQRSVEDALT-SL 718
Query: 645 KGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKSGWGFAFQRDS--PLAIDLSTA 699
K G + A + + + K C+ T+G + F +G+G A Q+DS AIDL A
Sbjct: 719 KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDL--A 776
Query: 700 ILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFF 759
+LQ +G+ QK+ WL+ C + + S+L + + G+F + +A LAL+ F
Sbjct: 777 LLQFLGDGETQKLETVWLS-GICHNEKNEVMS--SKLDIDNMAGVFYMLLVAMGLALLVF 833
Score = 86 (35.3 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 33/158 (20%), Positives = 66/158 (41%)
Query: 13 SSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYP--YFLRTTQSDYYQMHAVADLVEYY 70
+ +A ++ V ++ +VP+LS + + + P FL+ S Q+ + ++E Y
Sbjct: 101 TEAVAQLLDFVSSQTHVPILSISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEY 160
Query: 71 GWREVIAIFVDDDYGR----NGISVLGDA--LSKKRAKISYKAPFSPGASRSAINSLLVG 124
W A+ G G+ + DA LS + + PG R+ LL
Sbjct: 161 DW-SAFAVITSLHPGHALFLEGVRAVADASYLSWRLLDV-LTLELGPGGPRARTQRLL-- 216
Query: 125 ANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWI 162
+++ V V + + + +F+ A G+ +VW+
Sbjct: 217 -RQVDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWL 253
Score = 46 (21.3 bits), Expect = 1.8e-13, Sum P(3) = 1.8e-13
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 342 PPNSSSNRHLYSVIWPG-EITATPRGWV 368
P + RHL +V W G + + +P G++
Sbjct: 326 PAREAFYRHLLNVTWEGRDFSFSPGGYL 353
Score = 39 (18.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 106 KAPFSPGASRS---AINSLLVGANLMESRVFVVHVNPDTG 142
K P P S S ++S + +E R FV+ +PD G
Sbjct: 383 KYPVWPRYSTSLQPVVDSRHLTVATLEERPFVIVESPDPG 422
>UNIPROTKB|F1N984 [details] [associations]
symbol:GRIA4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030288 "outer membrane-bounded
periplasmic space" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0004971 "alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate
selective glutamate receptor activity" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=IEA] InterPro:IPR001320
InterPro:IPR001638 Pfam:PF00060 Pfam:PF00497 SMART:SM00079
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0030288
GO:GO:0032281 GeneTree:ENSGT00590000082809 GO:GO:0004971
GO:GO:0005234 EMBL:AADN02005016 EMBL:AADN02005017 EMBL:AADN02005018
IPI:IPI00820378 Ensembl:ENSGALT00000036432 Uniprot:F1N984
Length = 240
Score = 187 (70.9 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 63/201 (31%), Positives = 92/201 (45%)
Query: 572 SSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQD-GSFAWNYLVDELKIAESRLVK 629
SSYTA+L + LTV+++ S IE + L TE G D GS + ++ + E
Sbjct: 10 SSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKIAVYEKMWTY 69
Query: 630 LKNMEEYSIA------LARGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWG 683
+K+ E +AR K G A + E E + C+ VG G+G
Sbjct: 70 MKSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVGGNLDSKGYG 129
Query: 684 FAFQRDSPLAIDLSTAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFW 742
A + SPL ++ A+L+L+E G L K+ NKW EC + S LSL +
Sbjct: 130 VATPKGSPLRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVA 189
Query: 743 GLFLIC----GIACFLALIFF 759
G+F I G+A +ALI F
Sbjct: 190 GVFYILVGGLGLAMLVALIEF 210
>UNIPROTKB|F1NU20 [details] [associations]
symbol:GRIK2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005234 "extracellular-glutamate-gated ion channel
activity" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IEA] [GO:0001662
"behavioral fear response" evidence=IEA] [GO:0004970 "ionotropic
glutamate receptor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0019228 "regulation of action
potential in neuron" evidence=IEA] [GO:0032983 "kainate selective
glutamate receptor complex" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IEA] [GO:0048172 "regulation
of short-term neuronal synaptic plasticity" evidence=IEA]
[GO:0050806 "positive regulation of synaptic transmission"
evidence=IEA] [GO:0060079 "regulation of excitatory postsynaptic
membrane potential" evidence=IEA] [GO:0060080 "regulation of
inhibitory postsynaptic membrane potential" evidence=IEA]
InterPro:IPR001320 InterPro:IPR001508 InterPro:IPR019594
Pfam:PF00060 Pfam:PF10613 PRINTS:PR00177 SMART:SM00079
SMART:SM00918 Pfam:PF01094 GO:GO:0006886 GO:GO:0051967
GO:GO:0030054 GO:GO:0045211 GO:GO:0043025 GO:GO:0042734
GO:GO:0043524 GO:GO:0005622 GO:GO:0042391 GO:GO:0006874
GO:GO:0048169 InterPro:IPR001828 GO:GO:0048172 GO:GO:0050806
GO:GO:0005234 GO:GO:0015277 GO:GO:0032983 OMA:VNGQWNG
GeneTree:ENSGT00590000083056 EMBL:AADN02002208 EMBL:AADN02002209
EMBL:AADN02002210 EMBL:AADN02002211 EMBL:AADN02002212
EMBL:AADN02002213 EMBL:AADN02002214 EMBL:AADN02002215
EMBL:AADN02002216 EMBL:AADN02002217 EMBL:AADN02002218
EMBL:AADN02002219 EMBL:AADN02002220 EMBL:AADN02002221
EMBL:AADN02002222 IPI:IPI00573083 ProteinModelPortal:F1NU20
Ensembl:ENSGALT00000024893 Uniprot:F1NU20
Length = 877
Score = 167 (63.8 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 65/248 (26%), Positives = 111/248 (44%)
Query: 386 YNEFVAKDKSPPG---VKGYCIDVFEAAVNLLPYPVPHNYIMYGN-GKRNPI---YNDIV 438
Y F DK G +GYCID+ +L + + G G + +N +V
Sbjct: 412 YVMFKKSDKPLYGNDRFEGYCIDLLRELSTILGFSYEIRLVEDGKYGAQEDASGQWNGMV 471
Query: 439 QQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIP 497
+++ +K D AV + I R K++DF++P+M G+ ++ ++FL P +
Sbjct: 472 RELIDHKADLAVAPLAITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPD 531
Query: 498 MWLVTGGFFLFVGAVVWILEHRFNN-EFRGP----PSQQLV----TI---FWFSFSTMFF 545
+W+ +L V V++++ RF+ E+ P P +V T+ FWF +
Sbjct: 532 IWMYILLAYLGVSCVLFVIA-RFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQ 590
Query: 546 SHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-P 603
E +L R SSYTA+L + LTV+++ S I+ D L T+
Sbjct: 591 QGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTKIE 650
Query: 604 IG-VQDGS 610
G V+DG+
Sbjct: 651 YGAVEDGA 658
Score = 162 (62.1 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 62/244 (25%), Positives = 102/244 (41%)
Query: 532 LVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
L+ FWF + E +L R SSYTA+L + LTV+++ S
Sbjct: 577 LLNSFWFGVGALMQQGSELMPKALSTRIVGGIWWFFTLIIISSYTANLAAFLTVERMESP 636
Query: 591 IEGIDSLISSTE-PIG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGPKG-- 646
I+ D L T+ G V+DG+ + ++ + + + + S+ + +G
Sbjct: 637 IDSADDLAKQTKIEYGAVEDGATMTFFKKSKISTYDKMWAFMSSRRQ-SVLVKSNEEGIQ 695
Query: 647 ---GGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQL 703
A + E IE F+++ NC +G G+G SP ++ AILQL
Sbjct: 696 RVLTSDYAFLMESTTIE-FVTQRNCNLTQIGGLIDSKGYGVGTPMGSPYRDKITIAILQL 754
Query: 704 SENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRV 763
E G L + KW N C + S S L +++ G+F++ +A L L F
Sbjct: 755 QEEGKLHMMKEKWWRGNGCPEEESKE---ASALGVQNIGGIFIV--LAAGLVLSVFVA-- 807
Query: 764 CGQF 767
G+F
Sbjct: 808 VGEF 811
Score = 97 (39.2 bits), Expect = 2.2e-13, Sum P(2) = 2.2e-13
Identities = 77/337 (22%), Positives = 134/337 (39%)
Query: 6 VAAI-GPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQYPYFLRTTQSDYYQM-HAV 63
VAAI GP S A+ + + N L VP + S F + D+ + A+
Sbjct: 72 VAAIFGPSHSSSANAVQSICNALGVPHIQTRWKHQV--SDNKDSFYVSLYPDFSSLSRAI 129
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLLV 123
DLV+++ W+ V ++ DD G + L A S+ ++ + P ++ A L
Sbjct: 130 LDLVQFFKWKTVTVVY-DDSTGLIRLQELIKAPSRYNLRLKIRQ--LPADTKDAKPLLKE 186
Query: 124 GANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDTMN 183
E V + + + I A ++GM Y +I T LD EP +N
Sbjct: 187 MKRGKEFHV-IFDCSHEMAAGILKQALAMGMMTEYYHYIFTTLDLFALD-VEPYRYSGVN 244
Query: 184 LLQGVVALRHHTPDTDLKKNFISRW--KNLKYKENSPSGF-----NSYALYAYDSVWLVA 236
+ G L +T ++ + + I +W + L+ SG + A YD+V
Sbjct: 245 MT-GFRIL--NTENSQVS-SIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAV---- 296
Query: 237 HALDALLNEGGKFTFSN-DPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSGEI 295
H + + + + T S+ H SL + + + L R+ F +G +
Sbjct: 297 HVVSVAVQQFPQMTVSSLQCNRHKPWRFGTRFMSL-IKEAHWEGLTG--RITFNKSNG-L 352
Query: 296 RFDADKNLVNPAYDVLNIGGTGSRRIGYWSNYSGLSV 332
R D D DV+++ G ++G W SGL++
Sbjct: 353 RTDFD-------LDVISLKEEGLEKVGTWDPLSGLNM 382
>UNIPROTKB|Q6J164 [details] [associations]
symbol:GRM5 "Metabotropic glutamate receptor 5 splice
variant d" species:9606 "Homo sapiens" [GO:0004930 "G-protein
coupled receptor activity" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
InterPro:IPR000162 InterPro:IPR000202 InterPro:IPR000337
InterPro:IPR011500 InterPro:IPR017978 InterPro:IPR017979
Pfam:PF00003 Pfam:PF07562 PRINTS:PR00248 PRINTS:PR00593
PRINTS:PR01055 PROSITE:PS00979 PROSITE:PS00980 PROSITE:PS00981
PROSITE:PS50259 Pfam:PF01094 GO:GO:0016021 GO:GO:0005886
GO:GO:0004930 InterPro:IPR001828 HOVERGEN:HBG107965
InterPro:IPR019588 Pfam:PF10606 HOGENOM:HOG000218636
UniGene:Hs.147361 HGNC:HGNC:4597 ChiTaRS:GRM5 EMBL:AP000626
EMBL:AP001482 EMBL:AP001828 EMBL:AP003120 EMBL:AP006214
EMBL:AP006215 EMBL:AY608336 IPI:IPI00797769 SMR:Q6J164
STRING:Q6J164 Ensembl:ENST00000393297 Uniprot:Q6J164
Length = 942
Score = 187 (70.9 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 48/196 (24%), Positives = 94/196 (47%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQSDYYQMHAV 63
+V IGP SS +A + +++ N+P +++ AT L+ + YF+R SD Q A+
Sbjct: 143 IVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTLFKYFMRVVPSDAQQARAM 202
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLL- 122
D+V+ Y W V A+ + +YG +G+ D +K+ I++ A + + LL
Sbjct: 203 VDIVKRYNWTYVSAVHTEGNYGESGMEAFKDMSAKEGICIAHSYKIYSNAGEQSFDKLLK 262
Query: 123 -VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ ++L ++RV T + + LG+ AG ++ + +D D T+ +
Sbjct: 263 KLTSHLPKARVVACFCEGMTVRGLLMAMRRLGL-AGEFLLLGSDGWADRYDVTDGYQREA 321
Query: 182 MNLLQGVVALRHHTPD 197
+ G + ++ +PD
Sbjct: 322 V----GGITIKLQSPD 333
Score = 77 (32.2 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 276 GQQFLQTLLRMNFTGLSGE-IRFDADKNLVNPA-YDVLNIGGTGSR-----RIGYWSN 326
G++ L++L++ NFTG+SG+ I FD +N +P Y+++N G +G W N
Sbjct: 434 GRKLLESLMKTNFTGVSGDTILFD--ENGDSPGRYEIMNFKEMGKDYFDYINVGSWDN 489
>UNIPROTKB|K7GPI4 [details] [associations]
symbol:LOC100519996 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0004970 "ionotropic glutamate receptor activity" evidence=IEA]
InterPro:IPR001320 InterPro:IPR019594 Pfam:PF00060 Pfam:PF10613
SMART:SM00918 Pfam:PF01094 InterPro:IPR001828
GeneTree:ENSGT00590000082809 EMBL:CU210872 EMBL:CU469331
EMBL:CU856192 Ensembl:ENSSSCT00000032933 Ensembl:ENSSSCT00000036560
Uniprot:K7GPI4
Length = 625
Score = 153 (58.9 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 39/131 (29%), Positives = 74/131 (56%)
Query: 400 KGYCIDV-FEAAVNLLPYPVPHNYIMYGNGK---RNP---IYNDIVQQVALNKFDAAVGD 452
+GYC+D+ +E A ++ + + + G+GK R+P I+N +V ++ + D AV
Sbjct: 452 EGYCVDLAYEIAKHVR---IKYKLSIVGDGKYGARDPETKIWNGMVGELVYGRADIAVAP 508
Query: 453 ITIVTNRTKLVDFTQPYMESGL-VVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLFVG- 510
+TI R +++DF++P+M G+ +++ QK K ++FL P +W+ F ++G
Sbjct: 509 LTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCI--VFAYIGV 566
Query: 511 AVVWILEHRFN 521
+VV L RF+
Sbjct: 567 SVVLFLVSRFS 577
Score = 107 (42.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 57/274 (20%), Positives = 114/274 (41%)
Query: 62 AVADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSA--IN 119
A+ L+ +Y W + + ++ D + G + + + +A + +++ + S G +
Sbjct: 148 AILSLLGHYKWEKFVYLY-DTERGFSILQAIMEAAVQNNWQVTAR---SVGNIKDVQEFR 203
Query: 120 SLLVGANLMESRVFVVHVNPDTGLTIFSVAKSLGM-TAGSYVWIATDWLPSVLDSTEPVD 178
++ + + + +++ + TI LG + G + +A +L E V
Sbjct: 204 RIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHSRGYHYMLANLGFTDIL--LERVM 261
Query: 179 IDTMNLLQGVVALRHHTPDTDLKKNFISRWKNLKYKE-----NSPSGFNSYALYAYDSVW 233
N+ G + + P + + FI RW L +E N+P + S AL +D++
Sbjct: 262 HGGANIT-GFQIVNNENP---MVQQFIQRWVRLDEREFPEAKNAPLKYTS-AL-THDAIL 315
Query: 234 LVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLRMNFTGLSG 293
++A A L + D + G L ++ + G + L + G++G
Sbjct: 316 VIAEAFRYLRRQ------RVDVSRRGSAGDCLANPAVP-WSQGIDIERALKMVQVQGMTG 368
Query: 294 EIRFDADKNLVNPAYDVLNIGGTGSRRIGYWSNY 327
I+FD N DV + TGSR+ GYW+ Y
Sbjct: 369 NIQFDTYGRRTNYTIDVYEMKVTGSRKAGYWNEY 402
>RGD|68366 [details] [associations]
symbol:Grid1 "glutamate receptor, ionotropic, delta 1"
species:10116 "Rattus norvegicus" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0045211 "postsynaptic membrane" evidence=IDA] InterPro:IPR001320
InterPro:IPR001508 InterPro:IPR001638 InterPro:IPR019594
Pfam:PF00060 Pfam:PF00497 PRINTS:PR00177 SMART:SM00079 SMART:SM00918
Pfam:PF01094 RGD:68366 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054
GO:GO:0045211 GO:GO:0035235 GO:GO:0030288 InterPro:IPR001828
GO:GO:0005234 GO:GO:0004970 CTD:2894 eggNOG:NOG276334
HOVERGEN:HBG051840 KO:K05206 EMBL:U08255 EMBL:Z17238 IPI:IPI00207091
RefSeq:NP_077354.1 UniGene:Rn.10040 ProteinModelPortal:Q62640
SMR:Q62640 MINT:MINT-257777 STRING:Q62640 PhosphoSite:Q62640
PRIDE:Q62640 GeneID:79219 KEGG:rno:79219 UCSC:RGD:68366
ChEMBL:CHEMBL1681629 NextBio:614636 Genevestigator:Q62640
Uniprot:Q62640
Length = 1009
Score = 175 (66.7 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 59/235 (25%), Positives = 99/235 (42%)
Query: 396 PPGVKGYCIDVFEAAVNLLP-----YPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAV 450
P KG+ IDV +A L Y P YG+ N +N ++ ++ + D A+
Sbjct: 460 PKRYKGFSIDVLDALAKALGFKYEIYQAPDG--RYGHQLHNTSWNGMIGELISKRADLAI 517
Query: 451 GDITIVTNRTKLVDFTQPYMES--GLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLF 508
ITI R +VDF++ YM+ G+++ P +K+ S ++ PF +W
Sbjct: 518 SAITITPERESVVDFSKRYMDYSVGILIKKPEEKI--SIFSLFAPFDFAVWACIAAAIPV 575
Query: 509 VGAVVWILEH----RFNNEFRGPPSQQ--LVTIFWFSFSTMFFSHRENTVSSLG-RXXXX 561
VG ++++L R + + PS L + W + E++V+S+ R
Sbjct: 576 VGVLIFVLNRIQAVRSQSATQPRPSASATLHSAIWIVYGAFVQQGGESSVNSVAMRIVMG 635
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNY 615
SSYTA+L + LTV ++ S + L E G S + Y
Sbjct: 636 SWWLFTLIVCSSYTANLAAFLTVSRMDSPVRTFQDLSKQLEMSYGTVRDSAVYEY 690
Score = 159 (61.0 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 67/273 (24%), Positives = 105/273 (38%)
Query: 504 GFFLFVGAVVWILEHRFNNEFRGPPSQQLVTIFWFSFSTMFFSHRENTVSSLG-RXXXXX 562
G +FV + + + + R S L + W + E++V+S+ R
Sbjct: 577 GVLIFVLNRIQAVRSQSATQPRPSASATLHSAIWIVYGAFVQQGGESSVNSVAMRIVMGS 636
Query: 563 XXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNY------ 615
SSYTA+L + LTV ++ S + L E G S + Y
Sbjct: 637 WWLFTLIVCSSYTANLAAFLTVSRMDSPVRTFQDLSKQLEMSYGTVRDSAVYEYFRAKGT 696
Query: 616 --LVDELKIAESRLVKLKN------MEEYSIALARGPKGGGVAAIVDELPYIELF-MSKT 666
L + AE KN + S + + KG A + ++ +E ++
Sbjct: 697 NPLEQDSTFAELWRTISKNGGADNCVSNPSEGIRKAKKGN--YAFLWDVAVVEYAALTDD 754
Query: 667 NCEFRTVGQEFTKSGWGFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYN-ECSMD 725
+C +G + G+G A Q SP S IL+L + GDL + KW + C +
Sbjct: 755 DCSVTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQDTGDLDVLKQKWWPHTGRCDLT 814
Query: 726 L-SPADGGGSRLSLKSFWGLFLICGIACFLALI 757
S A G L L SF G+F I I LA +
Sbjct: 815 SHSSAQTDGKSLKLHSFAGVFCILAIGLLLACL 847
Score = 89 (36.4 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 226 LYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLR 285
LY YDSV ++A+A L D K H S + ++GG+ L T+ +
Sbjct: 321 LYLYDSVLMLANAFHRKLE---------DRKWHSMASLNCIRKSTKPWNGGRSMLDTIKK 371
Query: 286 MNFTGLSGEIRFDADKNLVNPAYDVLNIG-----GTGSRRIGYWSNYSGLS 331
+ TGL+G + F D + +++L G R++ W + GL+
Sbjct: 372 GHITGLTGVMEFREDSSNPYVQFEILGTTYSETFGKDMRKLATWDSEKGLN 422
>UNIPROTKB|Q9ULK0 [details] [associations]
symbol:GRID1 "Glutamate receptor ionotropic, delta-1"
species:9606 "Homo sapiens" [GO:0004970 "ionotropic glutamate
receptor activity" evidence=IEA] [GO:0005234
"extracellular-glutamate-gated ion channel activity" evidence=IEA]
[GO:0030288 "outer membrane-bounded periplasmic space"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
GO:GO:0035235 DrugBank:DB00142 GO:GO:0030288 EMBL:CH471142
InterPro:IPR001828 GO:GO:0005234 GO:GO:0004970 EMBL:AK127168
EMBL:BC039263 EMBL:AB033046 IPI:IPI00374337 RefSeq:NP_060021.1
UniGene:Hs.530653 ProteinModelPortal:Q9ULK0 SMR:Q9ULK0
STRING:Q9ULK0 PhosphoSite:Q9ULK0 DMDM:38372397 PaxDb:Q9ULK0
PRIDE:Q9ULK0 Ensembl:ENST00000327946 GeneID:2894 KEGG:hsa:2894
UCSC:uc001kdl.1 CTD:2894 GeneCards:GC10M087349 HGNC:HGNC:4575
MIM:610659 neXtProt:NX_Q9ULK0 PharmGKB:PA28970 eggNOG:NOG276334
HOGENOM:HOG000264260 HOVERGEN:HBG051840 InParanoid:Q9ULK0 KO:K05206
OMA:LLPWICQ PhylomeDB:Q9ULK0 BindingDB:Q9ULK0 ChEMBL:CHEMBL2936
GenomeRNAi:2894 NextBio:11451 ArrayExpress:Q9ULK0 Bgee:Q9ULK0
CleanEx:HS_GRID1 Genevestigator:Q9ULK0 GermOnline:ENSG00000182771
Uniprot:Q9ULK0
Length = 1009
Score = 175 (66.7 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 59/235 (25%), Positives = 99/235 (42%)
Query: 396 PPGVKGYCIDVFEAAVNLLP-----YPVPHNYIMYGNGKRNPIYNDIVQQVALNKFDAAV 450
P KG+ IDV +A L Y P YG+ N +N ++ ++ + D A+
Sbjct: 460 PKRYKGFSIDVLDALAKALGFKYEIYQAPDG--RYGHQLHNTSWNGMIGELISKRADLAI 517
Query: 451 GDITIVTNRTKLVDFTQPYMES--GLVVVAPVQKLKSSPWAFLKPFTIPMWLVTGGFFLF 508
ITI R +VDF++ YM+ G+++ P +K+ S ++ PF +W
Sbjct: 518 SAITITPERESVVDFSKRYMDYSVGILIKKPEEKI--SIFSLFAPFDFAVWACIAAAIPV 575
Query: 509 VGAVVWILEH----RFNNEFRGPPSQQ--LVTIFWFSFSTMFFSHRENTVSSLG-RXXXX 561
VG ++++L R + + PS L + W + E++V+S+ R
Sbjct: 576 VGVLIFVLNRIQAVRAQSAAQPRPSASATLHSAIWIVYGAFVQQGGESSVNSMAMRIVMG 635
Query: 562 XXXXXXXXXNSSYTASLTSILTVQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNY 615
SSYTA+L + LTV ++ + I L E G S + Y
Sbjct: 636 SWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEY 690
Score = 156 (60.0 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 62/250 (24%), Positives = 94/250 (37%)
Query: 525 RGPPSQQLVTIFWFSFSTMFFSHRENTVSSLG-RXXXXXXXXXXXXXNSSYTASLTSILT 583
R S L + W + E++V+S+ R SSYTA+L + LT
Sbjct: 598 RPSASATLHSAIWIVYGAFVQQGGESSVNSMAMRIVMGSWWLFTLIVCSSYTANLAAFLT 657
Query: 584 VQQLTSQIEGIDSLISSTE-PIGVQDGSFAWNY--------LVDELKIAES-RLVKLKNM 633
V ++ + I L E G S + Y L + AE R +
Sbjct: 658 VSRMDNPIRTFQDLSKQVEMSYGTVRDSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGG 717
Query: 634 EEYSIALA----RGPKGGGVAAIVDELPYIELFMSKTNCEFRTVGQEFTKSGWGFAFQRD 689
+ ++ R K G A + D ++ +C +G + G+G A Q
Sbjct: 718 ADNCVSSPSEGIRKAKKGNYAFLWDVAVVEYAALTDDDCSVTVIGNSISSKGYGIALQHG 777
Query: 690 SPLAIDLSTAILQLSENGDLQKIHNKWLTY-NECSMDL-SPADGGGSRLSLKSFWGLFLI 747
SP S IL+L + GDL + KW + C + + A G L L SF G+F I
Sbjct: 778 SPYRDLFSQRILELQDTGDLDVLKQKWWPHMGRCDLTSHASAQADGKSLKLHSFAGVFCI 837
Query: 748 CGIACFLALI 757
I LA +
Sbjct: 838 LAIGLLLACL 847
Score = 89 (36.4 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 29/111 (26%), Positives = 49/111 (44%)
Query: 226 LYAYDSVWLVAHALDALLNEGGKFTFSNDPKLHDTNGSMLNLSSLRVFDGGQQFLQTLLR 285
LY YDSV ++A+A L D K H S + ++GG+ L T+ +
Sbjct: 321 LYLYDSVLMLANAFHRKLE---------DRKWHSMASLNCIRKSTKPWNGGRSMLDTIKK 371
Query: 286 MNFTGLSGEIRFDADKNLVNPAYDVLNIG-----GTGSRRIGYWSNYSGLS 331
+ TGL+G + F D + +++L G R++ W + GL+
Sbjct: 372 GHITGLTGVMEFREDSSNPYVQFEILGTTYSETFGKDMRKLATWDSEKGLN 422
>UNIPROTKB|Q98UC6 [details] [associations]
symbol:mGluR5a "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004930 "G-protein coupled receptor activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR000162
InterPro:IPR000202 InterPro:IPR000337 InterPro:IPR011500
InterPro:IPR017978 InterPro:IPR017979 Pfam:PF00003 Pfam:PF07562
PRINTS:PR00248 PRINTS:PR00593 PRINTS:PR01055 PROSITE:PS00979
PROSITE:PS00980 PROSITE:PS00981 PROSITE:PS50259 Pfam:PF01094
GO:GO:0016021 GO:GO:0005886 GO:GO:0004930 InterPro:IPR001828
HOVERGEN:HBG107965 InterPro:IPR019588 Pfam:PF10606
GeneTree:ENSGT00660000095505 HOGENOM:HOG000218636 HSSP:P23385
EMBL:AADN02004808 EMBL:AADN02004809 EMBL:AADN02004810
EMBL:AADN02004811 EMBL:AADN02004812 EMBL:AADN02004813
EMBL:AADN02004814 UniGene:Gga.73 EMBL:AF227201 IPI:IPI00587422
SMR:Q98UC6 STRING:Q98UC6 Ensembl:ENSGALT00000027867 Uniprot:Q98UC6
Length = 1156
Score = 188 (71.2 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 48/196 (24%), Positives = 94/196 (47%)
Query: 5 VVAAIGPQSSGIAHVISHVVNELNVPLLSFGATDPTLTSLQ-YPYFLRTTQSDYYQMHAV 63
+V IGP SS +A + +++ N+P +++ AT L+ + YF+R SD Q A+
Sbjct: 149 IVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLSDKTLFKYFMRVVPSDAQQARAM 208
Query: 64 ADLVEYYGWREVIAIFVDDDYGRNGISVLGDALSKKRAKISYKAPFSPGASRSAINSLL- 122
D+V+ Y W V A+ + +YG +G+ D +K+ I++ A + + LL
Sbjct: 209 VDIVKRYNWTYVSAVHTEGNYGESGMEAFKDMAAKEGICIAHSYKIYSNAGEQSFDKLLR 268
Query: 123 -VGANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSVLDSTEPVDIDT 181
+ ++L ++RV T + + LG+ AG ++ + +D D T+ +
Sbjct: 269 KLRSHLPKARVVACFCEGMTVRGLLMAMRRLGL-AGEFLLLGSDGWADRYDVTDGYQREA 327
Query: 182 MNLLQGVVALRHHTPD 197
+ G + ++ +PD
Sbjct: 328 V----GGITIKLQSPD 339
Score = 77 (32.2 bits), Expect = 3.0e-13, Sum P(2) = 3.0e-13
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 276 GQQFLQTLLRMNFTGLSGE-IRFDADKNLVNPA-YDVLNIGGTGSR-----RIGYWSN 326
G++ L++L++ NFTG+SG+ I FD +N +P Y+++N G +G W N
Sbjct: 440 GRKLLESLMKTNFTGVSGDMILFD--ENGDSPGRYEIMNFKKMGKDYFDYINVGSWDN 495
>UNIPROTKB|F1MP46 [details] [associations]
symbol:GRIN2C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060079 "regulation of excitatory postsynaptic membrane
potential" evidence=IEA] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA] [GO:0042177 "negative regulation
of protein catabolic process" evidence=IEA] [GO:0033058
"directional locomotion" evidence=IEA] [GO:0017146
"N-methyl-D-aspartate selective glutamate receptor complex"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IEA]
[GO:0009611 "response to wounding" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005261 "cation channel activity" evidence=IEA]
[GO:0004972 "N-methyl-D-aspartate selective glutamate receptor
activity" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030288
"outer membrane-bounded periplasmic space" evidence=IEA]
[GO:0005234 "extracellular-glutamate-gated ion channel activity"
evidence=IEA] InterPro:IPR001320 InterPro:IPR001508
InterPro:IPR001638 InterPro:IPR019594 Pfam:PF00060 Pfam:PF00497
PRINTS:PR00177 SMART:SM00079 SMART:SM00918 Pfam:PF01094
GO:GO:0005737 GO:GO:0014069 GO:GO:0008104 GO:GO:0009611
GO:GO:0030054 GO:GO:0045211 GO:GO:0035235 GO:GO:0050885
GO:GO:0060079 GO:GO:0030288 GO:GO:0005261 GO:GO:0042177
InterPro:IPR001828 GO:GO:0017146 GO:GO:0005234 GO:GO:0004972
GO:GO:0033058 InterPro:IPR018884 Pfam:PF10565
GeneTree:ENSGT00540000070221 OMA:CTWRRIS EMBL:DAAA02049538
IPI:IPI00999923 Ensembl:ENSBTAT00000015137 Uniprot:F1MP46
Length = 1242
Score = 180 (68.4 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 59/244 (24%), Positives = 113/244 (46%)
Query: 370 PNNGMPLRIAVP-NRVSYNEFVAKDKSPPGVK----GYCIDVFEAAVNLLPYPVPHNYIM 424
P G + VP R S + F + + P K G+CID+ + ++ + +
Sbjct: 434 PGTGGCVPNTVPCRRQSNHTFSSSGDAAPYTKLCCKGFCIDILKKLARVVRFSYDLYLVT 493
Query: 425 YG-NGKR-NPIYNDIVQQVALNKFDAAVGDITIVTNRTKLVDFTQPYMESGLVVVAPVQK 482
G +GKR ++N ++ +V + D A+G +TI R+++VDF+ P++E+G+ V+
Sbjct: 494 NGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSN 553
Query: 483 LKSSPWAFLKPFTIPMWLVTGGFFLFVGAV-VWILEH----RFNNEFR-----GPPSQQL 532
SP AFL+P++ +W++ L V A+ V++ E+ +N G PS +
Sbjct: 554 GTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKRSGGPSFTI 613
Query: 533 VTIFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQ 590
W ++ +F + EN + + +SYTA+L + + +Q
Sbjct: 614 GKSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDT 673
Query: 591 IEGI 594
+ G+
Sbjct: 674 VSGL 677
Score = 131 (51.2 bits), Expect = 4.4e-08, Sum P(3) = 4.4e-08
Identities = 72/300 (24%), Positives = 129/300 (43%)
Query: 477 VAPVQKLKS-SPWAFLKPFTIPMWLVTGGFFLF-VGAVVWILEHRFNNEFRGPPSQQLVT 534
V+P L+ SP ++ F + + +V F+F + V ++ + + G PS +
Sbjct: 556 VSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKRSGGPSFTIGK 615
Query: 535 IFWFSFSTMFFSHR--ENTVSSLGRXXXXXXXXXXXXXNSSYTASLTSILTVQQLTSQIE 592
W ++ +F + EN + + +SYTA+L + + +Q +
Sbjct: 616 SVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVS 675
Query: 593 GI-DSLISSTE---P---IG-VQDGSFAWNYLVDELKIAESRLVKLKNMEEYSIALARGP 644
G+ D + P G V +GS N + + + +VK N AL
Sbjct: 676 GLSDKKFQRPQDQYPPFRFGTVPNGSTERN-IRSNYRDMHTHMVKF-NQRSVEDALT-SL 732
Query: 645 KGGGVAAIVDELPYIELFMSKTN-CEFRTVG--QEFTKSGWGFAFQRDS--PLAIDLSTA 699
K G + A + + + K C+ T+G + F +G+G A Q+DS AIDL A
Sbjct: 733 KMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDL--A 790
Query: 700 ILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFF 759
+LQ +G+ QK+ WL+ C + + S+L + + G+F + +A LAL+ F
Sbjct: 791 LLQFLGDGETQKLETVWLS-GICQNEKNEVMS--SKLDIDNMAGVFYMLLVAMGLALLVF 847
Score = 89 (36.4 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 39/172 (22%), Positives = 75/172 (43%)
Query: 13 SSGIAHVISHVVNELNVPLLSF-GATDPTLTSLQY-PYFLRTTQSDYYQMHAVADLVEYY 70
+ +A ++ + ++ +VP+LS G + LT + FL+ S Q+ + ++E Y
Sbjct: 114 TEAVAQILDFISSQTHVPILSISGGSAVVLTPKESGSAFLQLGVSLEQQLQVLFKVLEEY 173
Query: 71 GWREVIAIFVDDDYGR----NGISVLGDA--LSKKRAKISYKAPFSPGASRSAINSLLVG 124
W A+ G G+ + DA LS + + PG +R LL
Sbjct: 174 DW-SAFAVITSLHPGHALFLEGVRAVTDASYLSWRLLDV-LTLELGPGGARQHTQRLL-- 229
Query: 125 ANLMESRVFVVHVNPDTGLTIFSVAKSLGMTAGSYVWIATDWLPSV-LDSTE 175
+++ V V + + + +F+ A G+ +VW+ +PS+ L ST+
Sbjct: 230 -RQLDAPVLVAYCSREEAEVLFAEAAQAGLVGPGHVWL----VPSLALGSTD 276
Score = 44 (20.5 bits), Expect = 3.0e-13, Sum P(3) = 3.0e-13
Identities = 18/61 (29%), Positives = 27/61 (44%)
Query: 310 VLNIGGTGSRRI-GYWSNYSGLSVVAPEILYTKPPNSSSNRHLYSVIWPG-EITATPRGW 367
+L +G G RR G +G P L P + RHL +V W G + + P G+
Sbjct: 308 ILALGAHGYRRQHGALPAPAGDCRAHPGPL--SPAREAFYRHLLNVTWEGRDFSFGPGGY 365
Query: 368 V 368
+
Sbjct: 366 L 366
Score = 39 (18.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 106 KAPFSPGASRS---AINSLLVGANLMESRVFVVHVNPDTG 142
K P P S S ++S + +E R FV+ +PD G
Sbjct: 396 KYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPDPG 435
WARNING: HSPs involving 294 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 834 796 0.00097 121 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 544
No. of states in DFA: 626 (67 KB)
Total size of DFA: 418 KB (2201 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 64.42u 0.08s 64.50t Elapsed: 00:00:04
Total cpu time: 64.54u 0.08s 64.62t Elapsed: 00:00:05
Start: Sat May 11 14:20:48 2013 End: Sat May 11 14:20:53 2013
WARNINGS ISSUED: 2